LncRNA_GeneId LncRNA_Txid Hg19_coordinates No_Exons LncRNA_tx_size LncRNA_IntronS_size category GeneId_Cod.Pot Genc_polyA DiTAG5p3p,DiTAG5p,DiTAG3p 5p_completeness_by_cage overV7Coding,overV3cCoding,overRefSeqCoding phastcons_primate_transcript_score phastcons_primate_intron_score phastcons_primate_promoter_score phastcons_mammal_transcript_score phastcons_mammal_intron_score phastcons_mammal_promoter_score phastcons_vertebrate_transcript_score phastcons_vertebrate_intron_score phastcons_vertebrate_promoter_score PrimatesSpe Human_1PrimateSpe Species_Homologs gene_biotype tx_biotype CSHL_WholeCell_LPA+-_15CellLines familyIndex familySize familyIndex_ARfiltered familySize_ARfiltered ENSG00000243485.1 ENST00000473358.1 chr1:29554-31097 3 709 830 intergenic 2.92 0 0,0,0 0 0,0,0 0 0 0 0 0 0 0 0 33.99 0 0 chimp,horse,human,macaque,marmoset,orangutan, antisense antisense A549@0.0315135,AG04450@0.0502235,BJ@0.0559855,GM12878@0.092268,H1HESC@0.484999,HELAS3@0.062729,HEPG2@0.081595,HMEC@0.038375,HSMM@0.0622205,HUVEC@0.014338,K562@0.465386,MCF7@0.0649325,NHEK@0.00246767,NHLF@0.0537055,SKNSHRA@0.184512, 0 0 0 0 ENSG00000243485.1 ENST00000469289.1 chr1:30267-31109 2 533 307 intergenic 2.92 0 0,0,0 0 0,0,0 0 0 0 0 0 0 0 0 33.99 0 0 chimp,horse,human,macaque,marmoset,orangutan, antisense antisense A549@0.0315135,AG04450@0.0502235,BJ@0.0559855,GM12878@0.092268,H1HESC@0.484999,HELAS3@0.062729,HEPG2@0.081595,HMEC@0.038375,HSMM@0.0622205,HUVEC@0.014338,K562@0.465386,MCF7@0.0649325,NHEK@0.00246767,NHLF@0.0537055,SKNSHRA@0.184512, 0 0 0 0 ENSG00000238009.2 ENST00000466430.1 chr1:89295-120932 4 2744 28887 intergenic 5.26 0 0,0,0 0 0,0,0 0 0 0 0 4.02714023609236 0 72.8866618075802 21.495517014574 0 0 0 chimp,human, antisense antisense A549@0.628326,AG04450@0.19627,BJ@0.550603,GM12878@0.345781,H1HESC@0.121312,HELAS3@0.616391,HEPG2@0.949143,HMEC@0.139734,HSMM@0.315825,HUVEC@0.308647,K562@4.34232,MCF7@0.702114,NHEK@0.335411,NHLF@0.254402,SKNSHRA@0.536923, 0 0 0 0 ENSG00000239945.1 ENST00000495576.1 chr1:89551-91105 2 1317 235 intergenic 3.27 0 0,0,0 0 0,0,0 0 0 0 0 0 0 63.8633257403189 489 0 0 0 chimp,human, lincRNA lincRNA A549@0.810213,AG04450@0.0985035,BJ@0.305264,GM12878@0.410651,H1HESC@0.197003,HELAS3@1.6446,HEPG2@1.46457,HMEC@0.326642,HSMM@0.378918,HUVEC@0.744768,K562@6.17938,MCF7@1.07849,NHEK@0.152519,NHLF@0.66703,SKNSHRA@0.404323, 78 2 0 0 ENSG00000238009.2 ENST00000477740.1 chr1:92230-129217 4 487 36494 intergenic -0.11 0 0,0,0 0 0,0,0 0 0 0 0 4.26250890557352 0 181.626283367556 35.0684496081548 69.342 0 0 cat,chimp,cow,dog,elephant,horse,human,macaque,marmoset,mouse,orangutan,panda,pig,rabbit,rat, antisense antisense A549@0.628326,AG04450@0.19627,BJ@0.550603,GM12878@0.345781,H1HESC@0.121312,HELAS3@0.616391,HEPG2@0.949143,HMEC@0.139734,HSMM@0.315825,HUVEC@0.308647,K562@4.34232,MCF7@0.702114,NHEK@0.335411,NHLF@0.254402,SKNSHRA@0.536923, 5 7 2 7 ENSG00000238009.2 ENST00000471248.1 chr1:110953-129173 3 626 17590 intergenic 0.83 0 0,0,0 0 0,0,0 0 0 0 0 3.84587833996589 0 102.920127795527 42.4882888004548 93.366 0 0 chimp,human,macaque,marmoset,orangutan, antisense antisense A549@0.628326,AG04450@0.19627,BJ@0.550603,GM12878@0.345781,H1HESC@0.121312,HELAS3@0.616391,HEPG2@0.949143,HMEC@0.139734,HSMM@0.315825,HUVEC@0.308647,K562@4.34232,MCF7@0.702114,NHEK@0.335411,NHLF@0.254402,SKNSHRA@0.536923, 1 96 0 0 ENSG00000238009.2 ENST00000453576.2 chr1:129081-133566 2 334 4149 intergenic 0 0 0,0,0 0 0,0,0 0 0 0 0 0 0 500.580838323353 345.468064593878 0 0 0 chimp,cow,guinea_pig,horse,human,macaque,marmoset,mouse,orangutan,pig,platypus, antisense antisense A549@0.628326,AG04450@0.19627,BJ@0.550603,GM12878@0.345781,H1HESC@0.121312,HELAS3@0.616391,HEPG2@0.949143,HMEC@0.139734,HSMM@0.315825,HUVEC@0.308647,K562@4.34232,MCF7@0.702114,NHEK@0.335411,NHLF@0.254402,SKNSHRA@0.536923, 0 0 0 0 ENSG00000239906.1 ENST00000493797.1 chr1:139790-140339 2 321 226 intergenic -2.78 0 0,0,0 0 0,0,0 0 0 0 0 0 0 178.429906542056 387 0 0 0 chimp,cow,dog,horse,human,macaque,marmoset,orangutan,panda,pig,rat, antisense antisense A549@1.3588,AG04450@0.480548,BJ@1.14062,GM12878@3.43874,H1HESC@9.57322,HELAS3@2.64064,HEPG2@0.820331,HMEC@2.12005,HSMM@0.0402835,HUVEC@3.34353,K562@17.9369,MCF7@14.0507,NHEK@2.72254,NHLF@3.77357,SKNSHRA@4.21813, 169 2 0 0 ENSG00000241860.1 ENST00000484859.1 chr1:141474-149707 2 4858 3373 intergenic -1.11 1 0,0,0 0 0,0,0 0 0 0 0 0 0 0 0 0 0 0 chimp,human,macaque,orangutan, antisense antisense A549@0.888698,AG04450@0.57832,BJ@0.542974,GM12878@1.59612,H1HESC@5.4587,HELAS3@1.33713,HEPG2@1.45265,HMEC@0.291826,HSMM@0.371371,HUVEC@1.26689,K562@8.76362,MCF7@3.7573,NHEK@1.72512,NHLF@0.480961,SKNSHRA@2.06814, 0 0 0 0 ENSG00000241860.1 ENST00000490997.1 chr1:142808-146831 3 515 3504 intergenic -1.84 0 0,0,0 0 0,0,0 0 0 0 0 0 0 0 0 0 0 0 chimp,human,macaque,marmoset,orangutan, antisense antisense A549@0.888698,AG04450@0.57832,BJ@0.542974,GM12878@1.59612,H1HESC@5.4587,HELAS3@1.33713,HEPG2@1.45265,HMEC@0.291826,HSMM@0.371371,HUVEC@1.26689,K562@8.76362,MCF7@3.7573,NHEK@1.72512,NHLF@0.480961,SKNSHRA@2.06814, 0 0 0 0 ENSG00000241599.1 ENST00000496488.1 chr1:160446-161525 2 455 622 intergenic 3.21 0 0,0,0 0 0,0,0 0 0 0 0 0 0 0 0 0 0 0 chimp,cow,dog,elephant,guinea_pig,horse,human,macaque,marmoset,mouse,orangutan,panda,pig,rabbit, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0.004761,HMEC@0,HSMM@0,HUVEC@0,K562@0.299775,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000239368.1 ENST00000466557.1 chr1:164405-173864 6 966 8483 intergenic -0.95 0 0,0,0 0 0,0,0 0 0 0 0 0 0 106.698757763975 9.01438170458564 12.215 0 0 chimp,human,macaque,marmoset,orangutan,pig, lincRNA lincRNA A549@2.18034,AG04450@1.18745,BJ@1.39649,GM12878@1.65694,H1HESC@5.74715,HELAS3@2.20252,HEPG2@4.97194,HMEC@2.10743,HSMM@0.489758,HUVEC@1.62495,K562@12.2718,MCF7@8.24162,NHEK@2.4695,NHLF@0.511236,SKNSHRA@1.86769, 18 4 0 0 ENSG00000239368.1 ENST00000491962.1 chr1:165889-168767 3 275 2599 intergenic -1.67 0 0,0,0 0 0,0,0 0 0 0 0 0 0 67.1272727272727 1.20200076952674 0 0 0 chimp,guinea_pig,human,macaque,marmoset,orangutan, lincRNA lincRNA A549@2.18034,AG04450@1.18745,BJ@1.39649,GM12878@1.65694,H1HESC@5.74715,HELAS3@2.20252,HEPG2@4.97194,HMEC@2.10743,HSMM@0.489758,HUVEC@1.62495,K562@12.2718,MCF7@8.24162,NHEK@2.4695,NHLF@0.511236,SKNSHRA@1.86769, 1 96 0 0 ENSG00000228463.3 ENST00000442116.1 chr1:227615-234484 2 1290 5577 intergenic 26.03 0 0,0,0 0 0,0,0 0 0 0 0 0 0 399.26976744186 4.03550295857988 0 0 0 cat,chimp,cow,dog,elephant,guinea_pig,horse,human,macaque,marmoset,mouse,opossum,orangutan,panda,pig,rabbit,rat, processed_transcript processed_transcript A549@2.52653,AG04450@1.83907,BJ@1.72838,GM12878@1.24696,H1HESC@0.205421,HELAS3@1.33511,HEPG2@2.30191,HMEC@0.445088,HSMM@1.07735,HUVEC@0.652924,K562@11.705,MCF7@1.99894,NHEK@1.91763,NHLF@1.4888,SKNSHRA@1.63469, 0 0 0 0 ENSG00000228463.3 ENST00000448958.1 chr1:227895-238558 3 1922 8737 intergenic 26.03 0 0,0,1 0 0,0,0 0 0 0 0 0 41.16 267.9802289282 2.57594139864942 42.105 0 0 human, processed_transcript processed_transcript A549@2.52653,AG04450@1.83907,BJ@1.72838,GM12878@1.24696,H1HESC@0.205421,HELAS3@1.33511,HEPG2@2.30191,HMEC@0.445088,HSMM@1.07735,HUVEC@0.652924,K562@11.705,MCF7@1.99894,NHEK@1.91763,NHLF@1.4888,SKNSHRA@1.63469, 0 0 0 0 ENSG00000228463.3 ENST00000424587.1 chr1:235856-267253 4 2509 28882 intergenic 5.26 0 0,0,0 0 0,0,0 0 0 0 0 4.91780347621356 0 0 20.8816217713455 13.122 0 0 chimp,human, processed_transcript processed_transcript A549@2.52653,AG04450@1.83907,BJ@1.72838,GM12878@1.24696,H1HESC@0.205421,HELAS3@1.33511,HEPG2@2.30191,HMEC@0.445088,HSMM@1.07735,HUVEC@0.652924,K562@11.705,MCF7@1.99894,NHEK@1.91763,NHLF@1.4888,SKNSHRA@1.63469, 78 2 0 0 ENSG00000228463.3 ENST00000335577.4 chr1:257268-259121 2 508 1343 intergenic -8.12 0 0,0,0 0 0,0,0 0 0 0 0 8.16455696202532 0 0 9.72151898734177 0 0 0 chimp,human,macaque,orangutan, processed_transcript processed_transcript A549@2.52653,AG04450@1.83907,BJ@1.72838,GM12878@1.24696,H1HESC@0.205421,HELAS3@1.33511,HEPG2@2.30191,HMEC@0.445088,HSMM@1.07735,HUVEC@0.652924,K562@11.705,MCF7@1.99894,NHEK@1.91763,NHLF@1.4888,SKNSHRA@1.63469, 1 96 0 0 ENSG00000240876.1 ENST00000426316.1 chr1:317811-328455 2 466 10176 encompassing -1.84 0 0,0,1 0 0,1,0 0 0 0 0 0 0 169.339055793991 225.847287735849 0 0 0 chimp,horse,human,macaque,marmoset,orangutan, processed_transcript processed_transcript A549@0.135661,AG04450@0.040758,BJ@0.039927,GM12878@0.284967,H1HESC@0.215747,HELAS3@0.0065005,HEPG2@0.0891485,HMEC@0.034244,HSMM@0.0402025,HUVEC@0.0984325,K562@0.689964,MCF7@0.545867,NHEK@0.11968,NHLF@0.024026,SKNSHRA@0.296268, 0 0 0 0 ENSG00000237094.3 ENST00000432964.1 chr1:320162-321056 3 572 318 intergenic -1.33 0 0,0,0 0 0,0,0 0 0 0 0 0 0 0 0 0 0 0 chimp,dog,elephant,horse,human,macaque,marmoset,orangutan,panda, processed_transcript processed_transcript A549@1.84181,AG04450@1.17059,BJ@1.94222,GM12878@3.63813,H1HESC@25.3188,HELAS3@3.84962,HEPG2@5.798,HMEC@2.1751,HSMM@1.69551,HUVEC@4.82359,K562@21.9282,MCF7@8.65426,NHEK@3.19809,NHLF@2.21773,SKNSHRA@16.7361, 169 2 0 0 ENSG00000237094.3 ENST00000423728.1 chr1:320162-324461 3 570 3725 intergenic -1.33 0 0,0,0 0 0,0,0 0 0 0 0 0 0 0 84.7744966442953 0 0 0 chimp,dog,elephant,horse,human,macaque,marmoset,orangutan,panda, processed_transcript processed_transcript A549@1.84181,AG04450@1.17059,BJ@1.94222,GM12878@3.63813,H1HESC@25.3188,HELAS3@3.84962,HEPG2@5.798,HMEC@2.1751,HSMM@1.69551,HUVEC@4.82359,K562@21.9282,MCF7@8.65426,NHEK@3.19809,NHLF@2.21773,SKNSHRA@16.7361, 0 0 0 0 ENSG00000237094.3 ENST00000440038.1 chr1:322037-324743 3 552 2150 intergenic 0 0 0,0,0 0 0,1,0 0 0 0 0 0 0 190.057971014493 14.7809302325581 284.006 1 1 chimp,human,macaque,marmoset,orangutan, processed_transcript processed_transcript A549@1.84181,AG04450@1.17059,BJ@1.94222,GM12878@3.63813,H1HESC@25.3188,HELAS3@3.84962,HEPG2@5.798,HMEC@2.1751,HSMM@1.69551,HUVEC@4.82359,K562@21.9282,MCF7@8.65426,NHEK@3.19809,NHLF@2.21773,SKNSHRA@16.7361, 0 0 0 0 ENSG00000237094.3 ENST00000419160.1 chr1:322732-324955 2 545 1676 intergenic -7.12 0 0,0,0 0 0,1,0 0 0 0 0 0 0 298.354128440367 64.1050119331742 157.555 1 1 chimp,human,macaque,marmoset,orangutan, processed_transcript processed_transcript A549@1.84181,AG04450@1.17059,BJ@1.94222,GM12878@3.63813,H1HESC@25.3188,HELAS3@3.84962,HEPG2@5.798,HMEC@2.1751,HSMM@1.69551,HUVEC@4.82359,K562@21.9282,MCF7@8.65426,NHEK@3.19809,NHLF@2.21773,SKNSHRA@16.7361, 0 0 0 0 ENSG00000237094.3 ENST00000534867.1 chr1:324438-325896 3 1167 287 intergenic 4.11 0 0,0,0 0 0,1,0 0 0 0 0 0 0 556.72322193659 632 0 0 0 cat,chimp,human,macaque,marmoset,orangutan,rabbit,rat, processed_transcript processed_transcript A549@1.84181,AG04450@1.17059,BJ@1.94222,GM12878@3.63813,H1HESC@25.3188,HELAS3@3.84962,HEPG2@5.798,HMEC@2.1751,HSMM@1.69551,HUVEC@4.82359,K562@21.9282,MCF7@8.65426,NHEK@3.19809,NHLF@2.21773,SKNSHRA@16.7361, 0 0 0 0 ENSG00000237094.3 ENST00000456623.1 chr1:324515-326852 2 1156 1179 exonic 6.20 0 0,0,0 0 0,1,0 0 0 0 0 0 0 560.232698961938 632 0 0 0 cat,chimp,human,macaque,marmoset,orangutan,platypus,rabbit, processed_transcript processed_transcript A549@1.84181,AG04450@1.17059,BJ@1.94222,GM12878@3.63813,H1HESC@25.3188,HELAS3@3.84962,HEPG2@5.798,HMEC@2.1751,HSMM@1.69551,HUVEC@4.82359,K562@21.9282,MCF7@8.65426,NHEK@3.19809,NHLF@2.21773,SKNSHRA@16.7361, 93 2 53 2 ENSG00000237094.3 ENST00000425496.2 chr1:324756-328453 2 2659 1036 encompassing 6.20 0 1,1,1 0 0,1,0 0 0 0 0 0 0 603.536667920271 329.815637065637 112.496 0 0 chimp,human,macaque,marmoset,orangutan,rabbit, processed_transcript processed_transcript A549@1.84181,AG04450@1.17059,BJ@1.94222,GM12878@3.63813,H1HESC@25.3188,HELAS3@3.84962,HEPG2@5.798,HMEC@2.1751,HSMM@1.69551,HUVEC@4.82359,K562@21.9282,MCF7@8.65426,NHEK@3.19809,NHLF@2.21773,SKNSHRA@16.7361, 32 3 19 3 ENSG00000236601.1 ENST00000450983.1 chr1:453633-460480 2 605 6240 intergenic 3.91 0 0,0,0 0 0,0,0 0 0 0 0 0 0 0 0 0 0 0 chimp,human,macaque,orangutan, lincRNA lincRNA A549@0,AG04450@0.00388,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0.023979,MCF7@0.931218,NHEK@0.023637,NHLF@0,SKNSHRA@0.0112265, 46 3 83 2 ENSG00000236601.1 ENST00000412666.1 chr1:453827-460465 2 424 6212 intergenic 10.08 1 0,0,0 0 0,0,0 0 0 0 0 0 0 0 0 0 0 0 chimp,human,macaque,orangutan, lincRNA lincRNA A549@0,AG04450@0.00388,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0.023979,MCF7@0.931218,NHEK@0.023637,NHLF@0,SKNSHRA@0.0112265, 0 0 0 0 ENSG00000236743.1 ENST00000441866.1 chr1:459656-461954 3 673 1621 intergenic 6.79 0 0,1,0 0 0,0,0 0 0 0 0 0 0 0 0 0 0 0 chimp,human,macaque,orangutan, lincRNA lincRNA A549@0,AG04450@0.087395,BJ@0.046508,GM12878@0.0104025,H1HESC@0.0030685,HELAS3@0.056678,HEPG2@0.079996,HMEC@0.024229,HSMM@0.0221385,HUVEC@0.103611,K562@1.58462,MCF7@0.916146,NHEK@0.025122,NHLF@0.0057725,SKNSHRA@0.0656545, 0 0 0 0 ENSG00000231709.1 ENST00000417636.1 chr1:521369-523833 3 839 1621 intergenic 6.79 0 0,1,0 0 0,0,0 0 0 0 0 0 0 0 0 0 0 0 chimp,human,macaque,orangutan, lincRNA lincRNA A549@0.0110145,AG04450@0.13877,BJ@0.08615,GM12878@0.0111355,H1HESC@0.0049275,HELAS3@0.05496,HEPG2@0.084736,HMEC@0.019452,HSMM@0.190931,HUVEC@0.0831845,K562@1.82364,MCF7@0.752838,NHEK@0.026226,NHLF@0.013904,SKNSHRA@0.142846, 0 0 0 0 ENSG00000235146.2 ENST00000423796.1 chr1:523009-530148 2 605 6532 intergenic 3.66 0 0,0,0 0 0,0,0 0 0 0 0 0 0 0 0 0 0 0 chimp,human,macaque,orangutan, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0.170814,NHEK@0,NHLF@0,SKNSHRA@0, 46 3 83 2 ENSG00000235146.2 ENST00000450696.1 chr1:523048-529954 2 400 6504 intergenic 9.43 1 0,0,0 0 0,0,0 0 0 0 0 0 0 0 0 0 0 0 chimp,human,macaque,orangutan, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0.170814,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000239664.1 ENST00000440196.1 chr1:529833-530595 2 435 325 intergenic 0 0 0,1,0 0 0,0,0 0 0 0 0 0 0 0 0 0 0 0 chimp,human,macaque, lincRNA lincRNA A549@0.0043585,AG04450@0,BJ@0,GM12878@0.0058725,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0.042217,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000239664.1 ENST00000357876.4 chr1:529839-532878 2 496 2541 intergenic -9.86 0 0,1,0 0 0,0,0 0 0 0 0 0 0 0 0 0 0 0 human, lincRNA lincRNA A549@0.0043585,AG04450@0,BJ@0,GM12878@0.0058725,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0.042217,NHEK@0,NHLF@0,SKNSHRA@0, 46 3 0 0 ENSG00000230021.1 ENST00000440200.1 chr1:536816-655580 3 410 118350 encompassing 3.43 0 0,0,0 0 0,0,0 0 0 0 0 6.76899873257288 0 152.317073170732 55.7413772708069 25.86 0 0 cat,chimp,cow,dog,horse,human,macaque,mouse,orangutan,pig,rat, processed_transcript processed_transcript A549@0.471793,AG04450@0.201239,BJ@0.110102,GM12878@0.212379,H1HESC@0.107135,HELAS3@0.4302,HEPG2@1.1412,HMEC@0.048702,HSMM@0.0087305,HUVEC@0.125128,K562@1.12373,MCF7@0.312977,NHEK@0.148401,NHLF@0.024152,SKNSHRA@0.278913, 0 0 0 0 ENSG00000223659.1 ENST00000452176.1 chr1:562757-564390 3 799 830 intergenic 1.75 1 0,0,0 0 0,0,0 0 0 0 0 0 43.166 0 9.36144578313253 391.545 0 0 cat,chimp,dog,human,macaque,marmoset,orangutan,panda,rabbit, lincRNA lincRNA A549@0,AG04450@0.003909,BJ@0,GM12878@0.0050225,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0.0572725,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000230021.1 ENST00000441245.1 chr1:637316-655530 3 626 17584 intergenic 0.83 0 0,0,1 0 0,0,0 0 0 0 0 5.55527752502275 0 63.0990415335463 44.7261146496815 48.81 0 0 chimp,guinea_pig,human,macaque,marmoset,orangutan, processed_transcript processed_transcript A549@0.471793,AG04450@0.201239,BJ@0.110102,GM12878@0.212379,H1HESC@0.107135,HELAS3@0.4302,HEPG2@1.1412,HMEC@0.048702,HSMM@0.0087305,HUVEC@0.125128,K562@1.12373,MCF7@0.312977,NHEK@0.148401,NHLF@0.024152,SKNSHRA@0.278913, 1 96 0 0 ENSG00000230021.1 ENST00000419394.1 chr1:639065-655574 3 477 16028 intergenic -0.05 0 0,0,0 0 0,0,0 0 0 0 0 5.47566758173197 0 125.148846960168 48.3241202894934 28.614 0 0 cat,chimp,cow,dog,elephant,guinea_pig,horse,human,macaque,marmoset,mouse,orangutan,panda,pig,rabbit,rat, processed_transcript processed_transcript A549@0.471793,AG04450@0.201239,BJ@0.110102,GM12878@0.212379,H1HESC@0.107135,HELAS3@0.4302,HEPG2@1.1412,HMEC@0.048702,HSMM@0.0087305,HUVEC@0.125128,K562@1.12373,MCF7@0.312977,NHEK@0.148401,NHLF@0.024152,SKNSHRA@0.278913, 0 0 0 0 ENSG00000230021.1 ENST00000448605.1 chr1:639065-655580 2 272 16241 intergenic 0.88 0 0,0,0 0 0,0,0 0 0 0 0 5.40385444246044 0 229.595588235294 47.6903515793362 25.86 0 0 cat,chimp,cow,dog,elephant,horse,human,macaque,mouse,orangutan,pig,rat, processed_transcript processed_transcript A549@0.471793,AG04450@0.201239,BJ@0.110102,GM12878@0.212379,H1HESC@0.107135,HELAS3@0.4302,HEPG2@1.1412,HMEC@0.048702,HSMM@0.0087305,HUVEC@0.125128,K562@1.12373,MCF7@0.312977,NHEK@0.148401,NHLF@0.024152,SKNSHRA@0.278913, 0 0 0 0 ENSG00000230021.1 ENST00000414688.1 chr1:646722-655580 2 748 8108 intergenic -0.05 0 0,0,1 0 0,0,0 0 0 0 0 10.8243709916132 0 104.957219251337 93.5472372964973 25.86 0 0 cat,chimp,cow,dog,elephant,guinea_pig,horse,human,macaque,marmoset,mouse,orangutan,panda,pig,rabbit, processed_transcript processed_transcript A549@0.471793,AG04450@0.201239,BJ@0.110102,GM12878@0.212379,H1HESC@0.107135,HELAS3@0.4302,HEPG2@1.1412,HMEC@0.048702,HSMM@0.0087305,HUVEC@0.125128,K562@1.12373,MCF7@0.312977,NHEK@0.148401,NHLF@0.024152,SKNSHRA@0.278913, 5 7 2 7 ENSG00000230021.1 ENST00000447954.1 chr1:655438-659930 2 334 4156 intergenic 0 0 0,0,0 0 0,0,0 0 0 0 0 0 0 413.158682634731 264.405437921078 0 0 0 chimp,cow,dog,elephant,guinea_pig,horse,human,macaque,marmoset,mouse,orangutan,pig,platypus, processed_transcript processed_transcript A549@0.471793,AG04450@0.201239,BJ@0.110102,GM12878@0.212379,H1HESC@0.107135,HELAS3@0.4302,HEPG2@1.1412,HMEC@0.048702,HSMM@0.0087305,HUVEC@0.125128,K562@1.12373,MCF7@0.312977,NHEK@0.148401,NHLF@0.024152,SKNSHRA@0.278913, 0 0 0 0 ENSG00000235373.1 ENST00000416385.1 chr1:677193-685396 2 4858 3343 intergenic -1.11 0 0,0,0 0 0,0,0 0 0 0 0 0 0 0 0 0 0 0 chimp,human,macaque,orangutan, lincRNA lincRNA A549@0.987232,AG04450@0.620717,BJ@0.630523,GM12878@1.98832,H1HESC@6.29932,HELAS3@1.57508,HEPG2@1.71428,HMEC@0.233494,HSMM@0.408684,HUVEC@1.40828,K562@8.87293,MCF7@3.88071,NHEK@1.55246,NHLF@0.57246,SKNSHRA@2.44162, 0 0 0 0 ENSG00000240618.1 ENST00000417659.1 chr1:694412-700305 2 293 5598 intergenic -3.61 0 0,0,0 0 0,0,0 0 0 0 0 0 0 0 0 0 0 0 chimp,human,macaque,marmoset,orangutan, lincRNA processed_transcript A549@0.563012,AG04450@0.552529,BJ@0.187901,GM12878@0.83193,H1HESC@0.537655,HELAS3@0.473853,HEPG2@1.40334,HMEC@0.082372,HSMM@0.048712,HUVEC@0.336739,K562@2.5876,MCF7@0.182627,NHEK@0.555132,NHLF@0.139822,SKNSHRA@0.865006, 0 0 0 0 ENSG00000229905.1 ENST00000422528.1 chr1:696291-697369 2 454 622 intergenic 1.30 0 0,0,1 0 0,0,0 0 0 0 0 0 0 0 0 0 0 0 chimp,cow,dog,guinea_pig,horse,human,macaque,mouse,orangutan,panda,pig,rabbit, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0.033222,H1HESC@0,HELAS3@0,HEPG2@0.014314,HMEC@0,HSMM@0,HUVEC@0,K562@0.073737,MCF7@0.004509,NHEK@0.00579033,NHLF@0,SKNSHRA@0.0182945, 0 0 0 0 ENSG00000228327.2 ENST00000428504.1 chr1:700237-714006 7 1310 12447 intergenic -1.29 0 0,1,0 1 0,0,0 0 0 0 0 0 0 0 0 0 0 0 chimp,human,macaque,orangutan, lincRNA processed_transcript A549@2.23373,AG04450@1.38427,BJ@1.34076,GM12878@2.36129,H1HESC@4.63908,HELAS3@2.76748,HEPG2@4.20372,HMEC@0.929245,HSMM@0.960843,HUVEC@1.91309,K562@8.55578,MCF7@6.04889,NHEK@1.81341,NHLF@1.05142,SKNSHRA@2.64243, 18 4 0 0 ENSG00000237491.2 ENST00000457084.1 chr1:714162-717571 2 564 2843 intergenic 0.38 0 0,1,0 1 0,0,0 0 0 0 0 0 0 105.31914893617 67.4530425606753 0 0 0 chimp,human,orangutan, processed_transcript processed_transcript A549@0.153173,AG04450@0.246354,BJ@0.322376,GM12878@0.737923,H1HESC@0.403514,HELAS3@1.01588,HEPG2@0.994077,HMEC@0,HSMM@0.0303935,HUVEC@0.275723,K562@0.870724,MCF7@0.30096,NHEK@0.0854827,NHLF@0.035525,SKNSHRA@0.327189, 0 0 0 0 ENSG00000237491.2 ENST00000429505.1 chr1:714436-740255 3 438 25377 encompassing -0.53 0 0,0,0 0 0,0,0 0 0 0 0 0 0 0 9.91917878393821 0 0 0 chimp,human,macaque,marmoset,orangutan, processed_transcript processed_transcript A549@0.153173,AG04450@0.246354,BJ@0.322376,GM12878@0.737923,H1HESC@0.403514,HELAS3@1.01588,HEPG2@0.994077,HMEC@0,HSMM@0.0303935,HUVEC@0.275723,K562@0.870724,MCF7@0.30096,NHEK@0.0854827,NHLF@0.035525,SKNSHRA@0.327189, 0 0 0 0 ENSG00000242937.1 ENST00000434264.1 chr1:717325-720070 2 511 2232 intergenic -1.13 0 0,0,0 0 0,0,0 0 0 0 0 0 0 107.632093933464 0 196.169 0 0 chimp,human,macaque,opossum,orangutan,rabbit, lincRNA lincRNA A549@0.075258,AG04450@0.0558045,BJ@0.0064655,GM12878@0.529341,H1HESC@0.0452875,HELAS3@0.155811,HEPG2@0.106511,HMEC@0.01204,HSMM@0.017355,HUVEC@0.006742,K562@0.400804,MCF7@0.121355,NHEK@0.0198573,NHLF@0.011702,SKNSHRA@0.0875825, 0 0 0 0 ENSG00000230092.2 ENST00000447500.1 chr1:736259-745541 4 519 8757 intergenic 0.44 0 0,0,1 0 0,0,0 55.1290944123314 1.98880895283773 0 181.811175337187 2.2496288683339 14.28 231.849710982659 7.01438848920863 16.87 0 0 chimp,cow,dog,elephant,guinea_pig,horse,human,macaque,marmoset,mouse,opossum,orangutan,panda,pig,rat, lincRNA lincRNA A549@0.0766285,AG04450@0.172065,BJ@0.034905,GM12878@0.252889,H1HESC@0,HELAS3@0.030417,HEPG2@0.0253035,HMEC@0.354575,HSMM@0.035919,HUVEC@0.0139565,K562@0.152051,MCF7@0.041777,NHEK@0.083949,NHLF@0.0228845,SKNSHRA@0.147215, 0 0 0 0 ENSG00000241768.1 ENST00000443772.1 chr1:740179-742845 2 415 2249 intergenic 0 0 0,1,0 0 0,0,0 0 20.7425522454424 0 0 17.6042685638061 0 0 28.0373499333037 0 0 0 chimp,human,macaque,marmoset,orangutan, lincRNA lincRNA A549@0.168254,AG04450@0.165888,BJ@0.0991115,GM12878@0.255978,H1HESC@0.021665,HELAS3@0.087339,HEPG2@0.0734295,HMEC@0,HSMM@0,HUVEC@0.0721025,K562@0.025254,MCF7@0.174451,NHEK@0.036976,NHLF@0.0042865,SKNSHRA@0.210308, 0 0 0 0 ENSG00000241768.1 ENST00000412115.1 chr1:740312-745440 3 578 4546 intergenic -0.77 0 0,0,1 0 0,0,0 0 10.2617685877695 0 0.726643598615917 16.1003079630444 0 0.833910034602076 29.7287725472943 0 0 0 chimp,dog,horse,human,macaque,marmoset,orangutan, lincRNA lincRNA A549@0.168254,AG04450@0.165888,BJ@0.0991115,GM12878@0.255978,H1HESC@0.021665,HELAS3@0.087339,HEPG2@0.0734295,HMEC@0,HSMM@0,HUVEC@0.0721025,K562@0.025254,MCF7@0.174451,NHEK@0.036976,NHLF@0.0042865,SKNSHRA@0.210308, 0 0 0 0 ENSG00000240453.1 ENST00000435300.1 chr1:745489-753092 2 400 7201 intergenic -0.96 0 0,0,1 0 0,0,0 0 0 0 64.05 1.45813081516456 0 73.505 1.74031384529926 0 0 0 chimp,human,macaque,marmoset,orangutan,panda, lincRNA lincRNA A549@0.0395265,AG04450@0.406872,BJ@0.33625,GM12878@0.386098,H1HESC@0.0994785,HELAS3@0.533074,HEPG2@0.234716,HMEC@0.014086,HSMM@0.0496835,HUVEC@0.256246,K562@0.121988,MCF7@0.0787145,NHEK@0.259974,NHLF@0.136862,SKNSHRA@0.515976, 0 0 0 0 ENSG00000177757.1 ENST00000326734.1 chr1:752751-755214 2 1942 519 intergenic 2.62 0 0,0,1 0 0,0,0 0 0 0 0 0 0 16.1174047373841 0 0 0 0 chimp,human,macaque,orangutan, lincRNA lincRNA A549@0.0034695,AG04450@0.123719,BJ@0.0075125,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0.0572705,HMEC@0.063189,HSMM@0.0995005,HUVEC@0.056332,K562@0,MCF7@0.050271,NHEK@0.135666,NHLF@0.0370475,SKNSHRA@0.038865, 0 0 0 0 ENSG00000225880.4 ENST00000473798.1 chr1:761586-762902 1 1316 0 intergenic 7.25 1 1,1,1 1 0,0,0 0 0 0 0 0 0 0 0 0 0 0 cat,chimp,horse,human,macaque,marmoset,orangutan,panda,pig, lincRNA non_coding A549@0.155982,AG04450@0.253424,BJ@0.228227,GM12878@0.494853,H1HESC@0.562956,HELAS3@0.601221,HEPG2@0.512408,HMEC@0.171721,HSMM@0.106264,HUVEC@0.429206,K562@1.00334,MCF7@0.301515,NHEK@0.141425,NHLF@0.248552,SKNSHRA@0.390296, 0 0 0 0 ENSG00000225880.4 ENST00000536430.1 chr1:761589-762886 1 1297 0 intergenic 7.25 1 1,1,1 1 0,0,0 0 0 0 0 0 0 0 0 0 0 0 cat,chimp,horse,human,macaque,marmoset,orangutan,panda,pig, lincRNA non_coding A549@0.155982,AG04450@0.253424,BJ@0.228227,GM12878@0.494853,H1HESC@0.562956,HELAS3@0.601221,HEPG2@0.512408,HMEC@0.171721,HSMM@0.106264,HUVEC@0.429206,K562@1.00334,MCF7@0.301515,NHEK@0.141425,NHLF@0.248552,SKNSHRA@0.390296, 0 0 0 0 ENSG00000228794.1 ENST00000445118.1 chr1:762988-789791 5 1566 25229 intergenic 1.59 1 1,1,1 1 0,0,0 0 0 0 0 1.01153434539617 0 0 13.7375639145428 0 0 0 chimp,human, lincRNA processed_transcript A549@5.05778,AG04450@3.64774,BJ@3.83564,GM12878@5.41713,H1HESC@8.72409,HELAS3@7.49218,HEPG2@8.86816,HMEC@12.4833,HSMM@10.8969,HUVEC@6.45934,K562@10.6366,MCF7@6.90892,NHEK@12.2343,NHLF@5.37269,SKNSHRA@3.71909, 0 0 0 0 ENSG00000228794.1 ENST00000441765.1 chr1:763047-777118 3 747 13320 intergenic 9.31 0 0,1,0 1 0,0,0 0 0 0 0 0 0 0 23.9598348348348 0 0 0 chimp,human,macaque,orangutan, lincRNA processed_transcript A549@5.05778,AG04450@3.64774,BJ@3.83564,GM12878@5.41713,H1HESC@8.72409,HELAS3@7.49218,HEPG2@8.86816,HMEC@12.4833,HSMM@10.8969,HUVEC@6.45934,K562@10.6366,MCF7@6.90892,NHEK@12.2343,NHLF@5.37269,SKNSHRA@3.71909, 0 0 0 0 ENSG00000228794.1 ENST00000449005.1 chr1:763053-789006 6 868 25075 intergenic 1.59 0 0,1,0 1 0,0,0 0 0 0 0 1.01774675972084 0 0 13.8219341974078 0 0 0 chimp,human,macaque,marmoset, lincRNA processed_transcript A549@5.05778,AG04450@3.64774,BJ@3.83564,GM12878@5.41713,H1HESC@8.72409,HELAS3@7.49218,HEPG2@8.86816,HMEC@12.4833,HSMM@10.8969,HUVEC@6.45934,K562@10.6366,MCF7@6.90892,NHEK@12.2343,NHLF@5.37269,SKNSHRA@3.71909, 0 0 0 0 ENSG00000228794.1 ENST00000416570.1 chr1:763079-788146 5 607 24452 intergenic 1.59 0 0,1,0 1 0,0,0 0 0 0 0 1.04367740880092 0 0 14.1740961884508 0 0 0 chimp,human,macaque,marmoset, lincRNA processed_transcript A549@5.05778,AG04450@3.64774,BJ@3.83564,GM12878@5.41713,H1HESC@8.72409,HELAS3@7.49218,HEPG2@8.86816,HMEC@12.4833,HSMM@10.8969,HUVEC@6.45934,K562@10.6366,MCF7@6.90892,NHEK@12.2343,NHLF@5.37269,SKNSHRA@3.71909, 0 0 0 0 ENSG00000228794.1 ENST00000415295.1 chr1:766985-777400 2 892 9521 intergenic 9.31 0 0,1,1 0 0,0,0 0 0 0 0 0 0 0 8.97699821447327 0 0 0 chimp,human,macaque,orangutan, lincRNA processed_transcript A549@5.05778,AG04450@3.64774,BJ@3.83564,GM12878@5.41713,H1HESC@8.72409,HELAS3@7.49218,HEPG2@8.86816,HMEC@12.4833,HSMM@10.8969,HUVEC@6.45934,K562@10.6366,MCF7@6.90892,NHEK@12.2343,NHLF@5.37269,SKNSHRA@3.71909, 0 0 0 0 ENSG00000228794.1 ENST00000448975.1 chr1:783054-788838 5 595 5181 intergenic 1.59 0 0,1,0 0 0,0,0 0 0 0 0 0 0 0 0 0 0 0 chimp,human,macaque,marmoset, lincRNA processed_transcript A549@5.05778,AG04450@3.64774,BJ@3.83564,GM12878@5.41713,H1HESC@8.72409,HELAS3@7.49218,HEPG2@8.86816,HMEC@12.4833,HSMM@10.8969,HUVEC@6.45934,K562@10.6366,MCF7@6.90892,NHEK@12.2343,NHLF@5.37269,SKNSHRA@3.71909, 0 0 0 0 ENSG00000228794.1 ENST00000425657.1 chr1:786728-788132 2 843 559 intergenic 1.59 0 0,0,0 0 0,0,0 0 0 0 0 0 0 0 0 0 0 0 chimp,human,macaque,marmoset, lincRNA processed_transcript A549@5.05778,AG04450@3.64774,BJ@3.83564,GM12878@5.41713,H1HESC@8.72409,HELAS3@7.49218,HEPG2@8.86816,HMEC@12.4833,HSMM@10.8969,HUVEC@6.45934,K562@10.6366,MCF7@6.90892,NHEK@12.2343,NHLF@5.37269,SKNSHRA@3.71909, 0 0 0 0 ENSG00000230368.2 ENST00000446136.1 chr1:803451-812283 3 1804 7024 intergenic 7.81 1 0,0,1 0 0,0,0 0 0 0 0 0 0 239.879711751663 195.749288154897 0 0 0 human,orangutan, lincRNA lincRNA A549@0.256264,AG04450@0.077836,BJ@0.0761055,GM12878@0.281691,H1HESC@0.0092505,HELAS3@0.0549595,HEPG2@0.151186,HMEC@0.004532,HSMM@0.002523,HUVEC@0.047001,K562@0.209425,MCF7@0.0087955,NHEK@0.0677313,NHLF@0,SKNSHRA@0.196169, 0 0 0 0 ENSG00000230368.2 ENST00000432963.1 chr1:803620-805581 4 500 1455 intergenic 0.76 0 0,0,0 0 0,0,0 0 0 0 0 0 0 127.302 0 0 0 0 chimp,elephant,human,macaque,marmoset, lincRNA lincRNA A549@0.256264,AG04450@0.077836,BJ@0.0761055,GM12878@0.281691,H1HESC@0.0092505,HELAS3@0.0549595,HEPG2@0.151186,HMEC@0.004532,HSMM@0.002523,HUVEC@0.047001,K562@0.209425,MCF7@0.0087955,NHEK@0.0677313,NHLF@0,SKNSHRA@0.196169, 0 0 0 0 ENSG00000230368.2 ENST00000427857.1 chr1:803783-812182 3 443 7952 intergenic -0.37 0 0,0,0 0 0,0,0 0 0 0 0 0 0 42.9345372460497 207.832746478873 0 0 0 chimp,dog,human,macaque,marmoset,orangutan, lincRNA lincRNA A549@0.256264,AG04450@0.077836,BJ@0.0761055,GM12878@0.281691,H1HESC@0.0092505,HELAS3@0.0549595,HEPG2@0.151186,HMEC@0.004532,HSMM@0.002523,HUVEC@0.047001,K562@0.209425,MCF7@0.0087955,NHEK@0.0677313,NHLF@0,SKNSHRA@0.196169, 0 0 0 0 ENSG00000230699.2 ENST00000448179.1 chr1:846815-850328 2 3041 470 intergenic 14.73 0 0,1,0 0 0,0,0 0 0 0 0 0 23.005 0 0 23.179 0 0 chimp,human,marmoset, antisense antisense A549@0.181727,AG04450@0.067198,BJ@0.185547,GM12878@0.0095945,H1HESC@0.204444,HELAS3@0.243314,HEPG2@0.0510945,HMEC@0,HSMM@0.099605,HUVEC@0.0196865,K562@0.0631095,MCF7@0.461295,NHEK@0.000853667,NHLF@0.0019025,SKNSHRA@0.416403, 0 0 0 0 ENSG00000241180.1 ENST00000398216.2 chr1:849551-850351 2 441 357 intergenic -4.98 0 0,1,0 0 0,0,0 0 0 0 0 0 0 0 0 0 0 0 chimp,human,macaque,marmoset,orangutan, antisense antisense A549@0.092334,AG04450@0.001375,BJ@0,GM12878@0,H1HESC@0,HELAS3@0.0133045,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0.105957, 0 0 0 0 ENSG00000224969.1 ENST00000458555.1 chr1:947377-948573 2 469 725 intergenic 0 0 0,0,0 0 0,0,0 0 0 0 0 0 27.43 0 0 33.297 0 0 chimp,human,marmoset, antisense antisense A549@0,AG04450@0.12714,BJ@0.03952,GM12878@0.48436,H1HESC@0.123815,HELAS3@0.146499,HEPG2@0.20207,HMEC@0,HSMM@0.0174745,HUVEC@0.0622835,K562@0.022943,MCF7@0.0989995,NHEK@0.0167067,NHLF@0.0164325,SKNSHRA@0.069787, 0 0 0 0 ENSG00000223823.1 ENST00000416774.1 chr1:1072397-1079436 3 1617 5418 intergenic 10.87 1 0,1,0 0 0,0,0 0 0 0 2.9560915275201 0.0882244370616464 0 27.7291280148423 327.523071244002 84.199 0 0 chimp,human,macaque,marmoset,orangutan,rabbit, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0.0036105,H1HESC@0.056189,HELAS3@0.0562085,HEPG2@0.092787,HMEC@0,HSMM@0.0023515,HUVEC@0,K562@0,MCF7@0.025169,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000205231.1 ENST00000379317.1 chr1:1108436-1114935 2 3530 2967 exonic 7.89 0 0,0,0 0 0,0,0 0 0 0 4.4257790368272 0 64.425 42.956657223796 0.737108190091001 81.806 0 0 chimp,human,orangutan, antisense antisense A549@0,AG04450@0.0013335,BJ@0,GM12878@0.0048155,H1HESC@0.0214265,HELAS3@0,HEPG2@0.002317,HMEC@0,HSMM@0,HUVEC@0,K562@0.005488,MCF7@0.025939,NHEK@0.001103,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000240731.1 ENST00000444968.1 chr1:1252961-1254069 2 384 722 intronic 0 0 0,1,0 0 0,1,0 0 0 119.685 0 0 155.645 0 0 139.313 0 0 NA processed_transcript processed_transcript A549@0.129429,AG04450@0.202335,BJ@0.261526,GM12878@0.321287,H1HESC@0.352529,HELAS3@0.43262,HEPG2@0.777394,HMEC@0.853573,HSMM@0.0633165,HUVEC@0.656946,K562@0.995057,MCF7@0.309173,NHEK@0.324766,NHLF@0.353556,SKNSHRA@0.400628, 0 0 0 0 ENSG00000224870.2 ENST00000448629.2 chr1:1334902-1336467 3 794 767 intergenic 6.29 0 1,1,1 1 0,0,0 0 0 41.685 4.41687657430731 0 147.369 2.79471032745592 0 187.075 0 0 human,macaque,marmoset,orangutan, lincRNA processed_transcript A549@3.42941,AG04450@3.1713,BJ@4.21511,GM12878@4.10017,H1HESC@7.51048,HELAS3@10.1532,HEPG2@8.7219,HMEC@3.86143,HSMM@4.32906,HUVEC@3.63828,K562@9.02314,MCF7@5.72921,NHEK@3.72845,NHLF@3.99071,SKNSHRA@12.4322, 0 0 0 0 ENSG00000224870.2 ENST00000447725.1 chr1:1334902-1336805 3 1132 767 intergenic 7.53 0 1,1,1 1 0,0,0 0 0 41.685 3.09805653710247 0 147.369 1.96024734982332 0 187.075 0 0 horse,human,marmoset,orangutan, lincRNA processed_transcript A549@3.42941,AG04450@3.1713,BJ@4.21511,GM12878@4.10017,H1HESC@7.51048,HELAS3@10.1532,HEPG2@8.7219,HMEC@3.86143,HSMM@4.32906,HUVEC@3.63828,K562@9.02314,MCF7@5.72921,NHEK@3.72845,NHLF@3.99071,SKNSHRA@12.4322, 0 0 0 0 ENSG00000224870.2 ENST00000444362.1 chr1:1334907-1337426 3 1744 771 exonic 8.40 1 1,1,1 1 0,0,0 0 0 41.685 2.01089449541284 0 147.369 1.2723623853211 0 187.075 0 0 human,macaque,orangutan, lincRNA processed_transcript A549@3.42941,AG04450@3.1713,BJ@4.21511,GM12878@4.10017,H1HESC@7.51048,HELAS3@10.1532,HEPG2@8.7219,HMEC@3.86143,HSMM@4.32906,HUVEC@3.63828,K562@9.02314,MCF7@5.72921,NHEK@3.72845,NHLF@3.99071,SKNSHRA@12.4322, 0 0 0 0 ENSG00000224870.2 ENST00000418833.1 chr1:1334910-1336359 2 1147 300 intergenic 5.19 0 0,1,1 1 0,0,0 0 0 41.685 2.640802092415 0 147.608 1.93461203138622 0 187.075 0 0 human,orangutan, lincRNA processed_transcript A549@3.42941,AG04450@3.1713,BJ@4.21511,GM12878@4.10017,H1HESC@7.51048,HELAS3@10.1532,HEPG2@8.7219,HMEC@3.86143,HSMM@4.32906,HUVEC@3.63828,K562@9.02314,MCF7@5.72921,NHEK@3.72845,NHLF@3.99071,SKNSHRA@12.4322, 0 0 0 0 ENSG00000239298.1 ENST00000453521.1 chr1:1335799-1337426 2 856 769 exonic -5.79 1 0,1,1 0 0,0,0 0 0 0 0 0 7.589 0 0 7.177 0 0 chimp,human,macaque,marmoset,orangutan, lincRNA processed_transcript A549@0.815179,AG04450@0.483898,BJ@0.192404,GM12878@0.445351,H1HESC@0,HELAS3@0.639865,HEPG2@1.11101,HMEC@0.484224,HSMM@0.200639,HUVEC@0.118771,K562@0.374669,MCF7@0.565368,NHEK@0.121681,NHLF@0.684084,SKNSHRA@0.011497, 0 0 0 0 ENSG00000225905.1 ENST00000428932.1 chr1:1355625-1358071 2 541 1903 exonic 0 0 0,1,0 0 0,0,0 0 0 0 15.2865064695009 12.9075144508671 318.928 39.8280961182994 15.9763531266421 21.979 0 0 cat,cow,dog,elephant,guinea_pig,horse,human,macaque,marmoset,orangutan,panda,pig,platypus,rabbit, antisense antisense A549@0,AG04450@0,BJ@0.0044565,GM12878@0,H1HESC@0.326094,HELAS3@0.019535,HEPG2@0.0345,HMEC@0.030163,HSMM@0,HUVEC@0,K562@0,MCF7@0.014894,NHEK@0.0193433,NHLF@0.0071865,SKNSHRA@0.0125495, 0 0 0 0 ENSG00000230270.1 ENST00000439191.1 chr1:1360832-1363179 2 441 1904 intergenic 4.49 0 0,0,0 0 0,0,0 0 3.40283613445378 0 10.2040816326531 42.1538865546218 0 17.9047619047619 55.1875 14.558 0 0 human,macaque,marmoset,orangutan, antisense antisense A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0.049537,HELAS3@0,HEPG2@0.0061575,HMEC@0,HSMM@0.0051455,HUVEC@0,K562@0.0110885,MCF7@0.004641,NHEK@0,NHLF@0,SKNSHRA@0.06666, 0 0 0 0 ENSG00000205116.2 ENST00000378821.2 chr1:1361556-1363005 2 280 1167 intergenic 0 0 0,1,1 0 0,0,1 0 5.55184233076264 0 111.528571428571 10.6606683804627 13.322 162.632142857143 10.9982862039417 13.549 0 0 cat,cow,dog,elephant,guinea_pig,horse,human,macaque,marmoset,mouse,orangutan,panda,pig,rabbit,rat, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0.417727,HELAS3@0.118414,HEPG2@0.842849,HMEC@0.01452,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0.028079,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000203586.2 ENST00000366395.2 chr1:1363502-1365634 2 1207 923 intergenic -4.96 0 0,1,1 1 0,0,0 0 0 0 0 0 33.155 0 0 71.794 0 1 chimp,human,marmoset,orangutan, lincRNA lincRNA A549@0.0155345,AG04450@0.068373,BJ@0.044828,GM12878@0.010547,H1HESC@1.13129,HELAS3@0.59038,HEPG2@4.03575,HMEC@0.006774,HSMM@0.001702,HUVEC@0.004923,K562@0.019427,MCF7@0.010166,NHEK@0.0400803,NHLF@0.001596,SKNSHRA@0.166823, 0 0 0 0 ENSG00000236239.1 ENST00000428781.1 chr1:1363502-1365635 2 1208 923 intergenic 5.26 1 0,1,1 0 0,0,0 0 0 9.2 0 0 30.781 0 0 29.847 0 0 chimp,human,marmoset,orangutan, antisense antisense A549@0.002283,AG04450@0,BJ@0,GM12878@0.001666,H1HESC@0.0379255,HELAS3@0.0551945,HEPG2@0.089378,HMEC@0,HSMM@0,HUVEC@0.004919,K562@0.001919,MCF7@0.0101955,NHEK@0,NHLF@0.009771,SKNSHRA@0.0301205, 0 0 0 0 ENSG00000225285.1 ENST00000430109.1 chr1:1365919-1369953 2 508 3524 intergenic 11.49 0 0,1,1 0 0,0,0 0 0 0 85.3307086614173 12.3181044267877 20.581 81.1870078740158 18.8845062429058 22.836 0 0 cat,chimp,cow,dog,elephant,guinea_pig,horse,human,macaque,marmoset,orangutan,panda,pig,rabbit, antisense antisense A549@0.022576,AG04450@0.016113,BJ@0,GM12878@0.01975,H1HESC@0.518953,HELAS3@0.118759,HEPG2@0.676651,HMEC@0.008029,HSMM@0.018684,HUVEC@0.0141555,K562@0.011022,MCF7@0.0078845,NHEK@0.00297333,NHLF@0,SKNSHRA@0.196211, 0 0 0 0 ENSG00000225285.1 ENST00000434150.1 chr1:1365930-1367223 2 442 849 intergenic 6.35 0 0,1,1 0 0,0,0 0 0 0 62.2194570135747 0 0 61.6900452488688 0 5.112 0 0 cat,chimp,elephant,guinea_pig,human,macaque,marmoset,orangutan,rabbit, antisense antisense A549@0.022576,AG04450@0.016113,BJ@0,GM12878@0.01975,H1HESC@0.518953,HELAS3@0.118759,HEPG2@0.676651,HMEC@0.008029,HSMM@0.018684,HUVEC@0.0141555,K562@0.011022,MCF7@0.0078845,NHEK@0.00297333,NHLF@0,SKNSHRA@0.196211, 0 0 0 0 ENSG00000225285.1 ENST00000454562.1 chr1:1365930-1369868 2 422 3514 intergenic 0 0 0,1,1 0 0,0,0 0 0 0 83.0521327014218 12.3531587933978 28.881 78.3483412322275 18.9382470119522 31.016 0 0 cat,chimp,cow,dog,elephant,guinea_pig,horse,human,macaque,marmoset,orangutan,panda,pig,rabbit, antisense antisense A549@0.022576,AG04450@0.016113,BJ@0,GM12878@0.01975,H1HESC@0.518953,HELAS3@0.118759,HEPG2@0.676651,HMEC@0.008029,HSMM@0.018684,HUVEC@0.0141555,K562@0.011022,MCF7@0.0078845,NHEK@0.00297333,NHLF@0,SKNSHRA@0.196211, 0 0 0 0 ENSG00000225285.1 ENST00000417917.1 chr1:1366044-1369900 2 632 3222 intergenic 14.09 0 0,1,1 0 0,0,0 0 0 0 40.1851265822785 10.7026691495965 28.881 37.6740506329114 17.8590937306021 31.016 0 0 cat,chimp,cow,dog,elephant,horse,human,macaque,marmoset,orangutan,panda,pig,rabbit, antisense antisense A549@0.022576,AG04450@0.016113,BJ@0,GM12878@0.01975,H1HESC@0.518953,HELAS3@0.118759,HEPG2@0.676651,HMEC@0.008029,HSMM@0.018684,HUVEC@0.0141555,K562@0.011022,MCF7@0.0078845,NHEK@0.00297333,NHLF@0,SKNSHRA@0.196211, 0 0 0 0 ENSG00000245123.1 ENST00000502203.1 chr1:1535819-1545864 4 2215 7824 intergenic 2.36 0 0,0,1 0 0,0,0 0 0 145.728 0 0 414.289 0 19.2461656441718 350.724 0 1 chimp,human,macaque,orangutan, lincRNA lincRNA A549@0.0359745,AG04450@0.0842865,BJ@0.0852565,GM12878@0,H1HESC@0.127606,HELAS3@0.0229095,HEPG2@0.082442,HMEC@0.036905,HSMM@0.113282,HUVEC@0.0138785,K562@0.0587985,MCF7@0.138658,NHEK@0.034447,NHLF@0.030524,SKNSHRA@0.205429, 0 0 0 0 ENSG00000227775.1 ENST00000417099.1 chr1:1656054-1663343 2 1806 5481 intronic -3.38 0 0,0,0 0 0,0,0 0 0 0 0 2.93778507571611 22.026 0 4.97755883962781 22.605 0 0 chimp,human,macaque,marmoset,orangutan, lincRNA processed_transcript A549@0.0659745,AG04450@0.0462565,BJ@0.036411,GM12878@0.038435,H1HESC@0.109449,HELAS3@0.146753,HEPG2@0.0434645,HMEC@0.020383,HSMM@0.0229735,HUVEC@0.026279,K562@0.116293,MCF7@0.128727,NHEK@0.0535897,NHLF@0.0150965,SKNSHRA@0.279749, 0 0 0 0 ENSG00000244250.1 ENST00000424604.1 chr1:1663993-1667414 2 448 2971 intronic 4.67 0 0,0,0 0 0,0,0 0 0 0 0 15.4109727364524 0 92.9129464285714 40.7139010434197 0 0 0 chimp,human,marmoset,orangutan, processed_transcript processed_transcript A549@0.0364795,AG04450@0,BJ@0.0143825,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0.018185,HMEC@0,HSMM@0,HUVEC@0,K562@0.00516,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0.0111475, 0 0 0 0 ENSG00000231050.1 ENST00000412228.1 chr1:1822910-1824097 2 904 281 intergenic -5.60 0 1,1,1 0 0,0,0 0 0 16.94 0 0 196.245 58.466814159292 0 234.841 0 0 chimp,human,macaque,orangutan, antisense antisense A549@0.254873,AG04450@0.377535,BJ@0.313706,GM12878@0.534123,H1HESC@0.646745,HELAS3@1.36068,HEPG2@1.46347,HMEC@0.022597,HSMM@0.368012,HUVEC@0.345122,K562@0.400567,MCF7@1.00626,NHEK@0.0941253,NHLF@0.196261,SKNSHRA@0.940503, 0 0 0 0 ENSG00000233542.1 ENST00000443930.1 chr1:1944652-1946969 2 1952 363 intergenic 7.35 0 0,1,0 0 0,0,0 0 30.7438016528926 8.58 0.914446721311475 34.4407713498623 0 3.0655737704918 55.4793388429752 0 0 0 chimp,human,macaque,marmoset,orangutan, antisense antisense A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0.158275,HELAS3@0,HEPG2@0,HMEC@0.002096,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0.002483,SKNSHRA@0.00581, 0 0 0 0 ENSG00000226969.1 ENST00000445600.1 chr1:1980642-1981090 2 318 128 intergenic 3.34 0 0,0,1 0 0,0,0 0 0 29.07 0 0 101.501 0 0 136.697 0 0 chimp,horse,human,macaque,marmoset,orangutan, antisense antisense A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0.054568,HELAS3@0,HEPG2@0.008524,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0.004705,NHEK@0,NHLF@0,SKNSHRA@0.0071025, 0 0 0 0 ENSG00000226969.1 ENST00000449154.1 chr1:1980743-1981509 3 434 328 intergenic 3.34 0 0,1,1 0 0,0,0 0 0 48.222 0 0 126.981 0 20.6615853658537 156.688 0 0 chimp,horse,human,macaque,marmoset,orangutan, antisense antisense A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0.054568,HELAS3@0,HEPG2@0.008524,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0.004705,NHEK@0,NHLF@0,SKNSHRA@0.0071025, 0 0 0 0 ENSG00000182873.4 ENST00000333854.2 chr1:2113233-2115314 2 1251 828 intronic 1.46 0 0,0,1 0 0,0,0 0 0 0 0 0 41.542 22.431654676259 81.981884057971 48.684 0 0 chimp,human,macaque,marmoset,orangutan, antisense antisense A549@0.207062,AG04450@0.316215,BJ@0.315649,GM12878@0.0060445,H1HESC@0.582954,HELAS3@0.1184,HEPG2@0.19604,HMEC@0.09974,HSMM@0.264954,HUVEC@0.173073,K562@0.051196,MCF7@0.315972,NHEK@0.061115,NHLF@0.337828,SKNSHRA@1.24664, 0 0 0 0 ENSG00000182873.4 ENST00000536678.1 chr1:2113233-2115492 1 2259 0 intronic 2.06 0 0,1,1 0 0,0,0 0 0 3.157 0 0 76.354 42.4714475431607 0 92.476 0 1 human,macaque,orangutan, antisense antisense A549@0.207062,AG04450@0.316215,BJ@0.315649,GM12878@0.0060445,H1HESC@0.582954,HELAS3@0.1184,HEPG2@0.19604,HMEC@0.09974,HSMM@0.264954,HUVEC@0.173073,K562@0.051196,MCF7@0.315972,NHEK@0.061115,NHLF@0.337828,SKNSHRA@1.24664, 0 0 0 0 ENSG00000182873.4 ENST00000444529.1 chr1:2114174-2115828 3 619 1031 intronic -1.87 0 0,1,0 0 0,0,0 0 0 24.534 0 0 98.799 17.0064620355412 55.2774005819593 133.555 0 0 chimp,human,macaque,marmoset,orangutan, antisense antisense A549@0.207062,AG04450@0.316215,BJ@0.315649,GM12878@0.0060445,H1HESC@0.582954,HELAS3@0.1184,HEPG2@0.19604,HMEC@0.09974,HSMM@0.264954,HUVEC@0.173073,K562@0.051196,MCF7@0.315972,NHEK@0.061115,NHLF@0.337828,SKNSHRA@1.24664, 0 0 0 0 ENSG00000229813.1 ENST00000420406.1 chr1:2357419-2362089 2 369 4299 intergenic 5.16 0 0,0,0 0 0,0,0 0 0 0 20.0948509485095 4.46289834845313 0 26.0785907859079 11.0895557106304 0 0 0 cat,chimp,cow,dog,elephant,guinea_pig,human,macaque,marmoset,mouse,orangutan,panda,rat, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0.0286305,H1HESC@0.015689,HELAS3@0.014307,HEPG2@0,HMEC@11.1352,HSMM@0,HUVEC@0,K562@0,MCF7@0.0438155,NHEK@6.9311,NHLF@0,SKNSHRA@0.0183785, 0 0 0 0 ENSG00000224387.1 ENST00000424657.1 chr1:2423739-2424697 2 453 503 intronic 11.98 1 0,1,0 0 0,0,0 0 0 0 0 0 0 0 0 0 0 0 chimp,human,macaque,marmoset,orangutan, antisense antisense A549@0,AG04450@0,BJ@0.005411,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0.0379015,HUVEC@0,K562@0,MCF7@0.0090375,NHEK@0,NHLF@0.0042885,SKNSHRA@0.0099815, 0 0 0 0 ENSG00000229393.1 ENST00000442305.1 chr1:2424876-2425918 2 512 528 intronic -1.30 0 0,1,0 0 0,0,0 0 0 0 0 0 12.499 0 0 28.019 0 0 chimp,human,macaque,marmoset,orangutan, antisense antisense A549@0,AG04450@0,BJ@0.009416,GM12878@0,H1HESC@0.0163775,HELAS3@0.0309805,HEPG2@0,HMEC@0,HSMM@0.013305,HUVEC@0.01158,K562@0,MCF7@0.0119445,NHEK@0,NHLF@0,SKNSHRA@0.0132575, 0 0 0 0 ENSG00000238164.2 ENST00000449660.1 chr1:2481359-2483545 3 1626 556 intergenic 6.56 1 0,0,1 0 0,0,0 0 0 0 0 0 0 0 0 0 0 0 chimp,human,orangutan, lincRNA processed_transcript A549@0.0012165,AG04450@0.014368,BJ@0.131444,GM12878@2.15297,H1HESC@0.0020575,HELAS3@0.137062,HEPG2@0.941959,HMEC@0.358387,HSMM@0.008153,HUVEC@0.161469,K562@0.0148105,MCF7@0,NHEK@0.022956,NHLF@0.0564845,SKNSHRA@0.000644, 0 0 0 0 ENSG00000238164.2 ENST00000443892.2 chr1:2481359-2485684 2 498 3825 intergenic 1.11 1 0,0,1 0 0,0,0 0 0 0 0 0 0 0 0 0 0 0 chimp,human,macaque,marmoset,orangutan, lincRNA processed_transcript A549@0.0012165,AG04450@0.014368,BJ@0.131444,GM12878@2.15297,H1HESC@0.0020575,HELAS3@0.137062,HEPG2@0.941959,HMEC@0.358387,HSMM@0.008153,HUVEC@0.161469,K562@0.0148105,MCF7@0,NHEK@0.022956,NHLF@0.0564845,SKNSHRA@0.000644, 0 0 0 0 ENSG00000238164.2 ENST00000416860.2 chr1:2481359-2488450 6 3516 3565 exonic 5.75 1 1,1,1 1 0,0,0 0 0 0 0 0.556521739130435 9.012 0 0.563253856942497 9.174 0 0 chimp,human,macaque,orangutan, lincRNA processed_transcript A549@0.0012165,AG04450@0.014368,BJ@0.131444,GM12878@2.15297,H1HESC@0.0020575,HELAS3@0.137062,HEPG2@0.941959,HMEC@0.358387,HSMM@0.008153,HUVEC@0.161469,K562@0.0148105,MCF7@0,NHEK@0.022956,NHLF@0.0564845,SKNSHRA@0.000644, 0 0 0 0 ENSG00000238164.2 ENST00000448624.2 chr1:2481513-2483037 2 806 716 intergenic 6.56 0 0,1,0 0 0,0,0 0 0 0 0 0 0 0 0 0 0 0 chimp,human,macaque,orangutan, lincRNA processed_transcript A549@0.0012165,AG04450@0.014368,BJ@0.131444,GM12878@2.15297,H1HESC@0.0020575,HELAS3@0.137062,HEPG2@0.941959,HMEC@0.358387,HSMM@0.008153,HUVEC@0.161469,K562@0.0148105,MCF7@0,NHEK@0.022956,NHLF@0.0564845,SKNSHRA@0.000644, 0 0 0 0 ENSG00000238164.2 ENST00000432521.2 chr1:2481722-2485589 2 3606 259 intergenic 6.56 1 0,1,1 0 0,0,0 0 0 0 0 0 0 0 0 0 0 0 human,macaque, lincRNA processed_transcript A549@0.0012165,AG04450@0.014368,BJ@0.131444,GM12878@2.15297,H1HESC@0.0020575,HELAS3@0.137062,HEPG2@0.941959,HMEC@0.358387,HSMM@0.008153,HUVEC@0.161469,K562@0.0148105,MCF7@0,NHEK@0.022956,NHLF@0.0564845,SKNSHRA@0.000644, 0 0 0 0 ENSG00000238164.2 ENST00000452793.1 chr1:2485680-2488470 4 565 2219 exonic 8.92 0 0,1,1 1 0,0,0 0 0 0 0 0.894096439837765 9.012 0 0.904912122577738 9.174 0 0 chimp,human,macaque,marmoset,orangutan, lincRNA processed_transcript A549@0.0012165,AG04450@0.014368,BJ@0.131444,GM12878@2.15297,H1HESC@0.0020575,HELAS3@0.137062,HEPG2@0.941959,HMEC@0.358387,HSMM@0.008153,HUVEC@0.161469,K562@0.0148105,MCF7@0,NHEK@0.022956,NHLF@0.0564845,SKNSHRA@0.000644, 0 0 0 0 ENSG00000225931.2 ENST00000456687.2 chr1:2497849-2508811 4 1493 9463 intergenic 4.71 1 0,0,1 0 0,0,0 0 0 0 0 0 0 0 0 0 0 0 chimp,human,macaque,marmoset,orangutan, antisense antisense A549@0,AG04450@0.022018,BJ@0.013674,GM12878@0.427419,H1HESC@0,HELAS3@0.019518,HEPG2@0.084401,HMEC@0.00547,HSMM@0.007317,HUVEC@0.0326615,K562@0,MCF7@0,NHEK@0.00517467,NHLF@0.018919,SKNSHRA@0, 0 0 0 0 ENSG00000228037.1 ENST00000424215.1 chr1:2512999-2515972 3 623 2346 intergenic 6.01 1 0,0,1 0 0,0,0 0 0 0 0 0 0 0 0 0 0 0 chimp,human,macaque,marmoset,orangutan, antisense antisense A549@0.02155,AG04450@0.003762,BJ@0.007866,GM12878@4.27471,H1HESC@0.009298,HELAS3@0,HEPG2@0.155119,HMEC@0,HSMM@0.0394425,HUVEC@0,K562@0,MCF7@0.038831,NHEK@0.00210433,NHLF@0.021576,SKNSHRA@0, 0 0 0 0 ENSG00000237058.1 ENST00000427302.1 chr1:2564007-2568059 2 371 3679 exonic -2.59 1 0,0,0 0 0,0,0 0 0 0 0 1.20576243544441 0 0 57.8445229681979 18.156 0 0 human,macaque,marmoset,orangutan, antisense antisense A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0.336116,HELAS3@0,HEPG2@0.011424,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000233234.1 ENST00000457440.1 chr1:2728415-2729257 2 605 235 intergenic 4.80 0 0,0,1 0 0,0,0 0 0 0 0 0 0 0 0 0 0 0 chimp,human,macaque,orangutan, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000231630.1 ENST00000429389.1 chr1:2730997-2731563 2 427 137 intergenic 4.95 1 0,0,0 0 0,0,0 0 0 0 0 0 0 0 0 0 0 0 chimp,human,macaque,orangutan, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0.0138545,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000177133.5 ENST00000321399.3 chr1:2976179-2980350 6 2220 1941 intergenic 2.54 1 0,1,1 0 0,0,0 20.0036036036036 51.5713549716641 0 24.5612612612613 38.8598660484286 4.692 30.4788288288288 32.9325090159711 4.828 0 0 chimp,human,macaque,marmoset,orangutan, processed_transcript processed_transcript A549@0.000511,AG04450@0.001007,BJ@0.010772,GM12878@0,H1HESC@0.022111,HELAS3@0.0297535,HEPG2@0.52581,HMEC@0,HSMM@0.0535235,HUVEC@0,K562@0,MCF7@0.147041,NHEK@0,NHLF@0.004923,SKNSHRA@0, 0 0 0 0 ENSG00000177133.5 ENST00000413472.1 chr1:2976181-2978315 4 557 1571 intergenic 3.19 1 0,0,1 0 0,0,0 78.4201077199282 63.7173774665818 0 94.1023339317774 48.0120942075111 0 117.504488330341 40.6887332908975 0 0 0 chimp,cow,horse,human,macaque,marmoset,orangutan, processed_transcript processed_transcript A549@0.000511,AG04450@0.001007,BJ@0.010772,GM12878@0,H1HESC@0.022111,HELAS3@0.0297535,HEPG2@0.52581,HMEC@0,HSMM@0.0535235,HUVEC@0,K562@0,MCF7@0.147041,NHEK@0,NHLF@0.004923,SKNSHRA@0, 0 0 0 0 ENSG00000177133.5 ENST00000453118.1 chr1:2976181-2978596 3 1694 717 intergenic 9.83 1 0,0,1 0 0,0,0 85.0909090909091 0 0 75.8010625737898 0 0 76.7219598583235 0 0 0 0 chimp,horse,human,macaque,marmoset,orangutan, processed_transcript processed_transcript A549@0.000511,AG04450@0.001007,BJ@0.010772,GM12878@0,H1HESC@0.022111,HELAS3@0.0297535,HEPG2@0.52581,HMEC@0,HSMM@0.0535235,HUVEC@0,K562@0,MCF7@0.147041,NHEK@0,NHLF@0.004923,SKNSHRA@0, 0 0 0 0 ENSG00000177133.5 ENST00000445317.1 chr1:2976181-2985001 7 4240 4568 intergenic 10.60 1 0,1,1 0 0,0,0 17.872641509434 21.9133099824869 204.808 60.3165094339623 23.6357267950963 418.3 76.7242924528302 20.8896672504378 364.24 0 0 chimp,human,macaque, processed_transcript processed_transcript A549@0.000511,AG04450@0.001007,BJ@0.010772,GM12878@0,H1HESC@0.022111,HELAS3@0.0297535,HEPG2@0.52581,HMEC@0,HSMM@0.0535235,HUVEC@0,K562@0,MCF7@0.147041,NHEK@0,NHLF@0.004923,SKNSHRA@0, 0 0 0 0 ENSG00000177133.5 ENST00000415573.1 chr1:2977853-2980246 2 278 2113 intergenic 0 0 0,1,0 0 0,0,0 0 0 0 0 0 6.533 0 0 6.732 0 0 chimp,dog,horse,human,macaque,marmoset,orangutan,panda, processed_transcript processed_transcript A549@0.000511,AG04450@0.001007,BJ@0.010772,GM12878@0,H1HESC@0.022111,HELAS3@0.0297535,HEPG2@0.52581,HMEC@0,HSMM@0.0535235,HUVEC@0,K562@0,MCF7@0.147041,NHEK@0,NHLF@0.004923,SKNSHRA@0, 0 0 0 0 ENSG00000177133.5 ENST00000321336.1 chr1:2980636-2984333 2 662 3033 intergenic 12.27 1 0,1,1 0 0,0,0 0 0 88.596 178.712990936556 8.67754698318497 58.549 184.791540785499 8.31388064622486 54.498 0 0 chimp,cow,dog,horse,human,macaque,marmoset,orangutan,panda,pig, processed_transcript processed_transcript A549@0.000511,AG04450@0.001007,BJ@0.010772,GM12878@0,H1HESC@0.022111,HELAS3@0.0297535,HEPG2@0.52581,HMEC@0,HSMM@0.0535235,HUVEC@0,K562@0,MCF7@0.147041,NHEK@0,NHLF@0.004923,SKNSHRA@0, 0 0 0 0 ENSG00000226286.1 ENST00000440516.1 chr1:3049491-3050273 2 467 313 intronic 4.79 0 0,0,0 0 0,0,0 0 0 31.812 0 0 2.783 0 0 5.958 0 0 chimp,human,macaque,marmoset,orangutan, antisense antisense A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0.013055,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000238260.1 ENST00000435049.1 chr1:3539754-3541307 3 619 930 intergenic -0.29 0 0,1,0 0 0,0,0 0 0 46.256 0 0 160.359 0 0 183.196 0 0 chimp,human,macaque,orangutan, antisense antisense A549@0.0402895,AG04450@0.096038,BJ@0.0912165,GM12878@0.104729,H1HESC@0.036724,HELAS3@0.133678,HEPG2@0.036682,HMEC@0.013166,HSMM@0.0146595,HUVEC@0.0703175,K562@0.084931,MCF7@0.039154,NHEK@0.00211767,NHLF@0.034193,SKNSHRA@0.211807, 0 0 0 0 ENSG00000227589.1 ENST00000443034.1 chr1:3575502-3585336 3 751 9079 intronic 3.75 0 0,0,0 0 0,0,0 0 2.78620993501487 0 0 6.994052208393 24.887 0 8.48959136468774 24.896 0 0 chimp,human,orangutan, antisense antisense A549@0,AG04450@0,BJ@0,GM12878@0.327031,H1HESC@0,HELAS3@0,HEPG2@0.04593,HMEC@0,HSMM@0.116658,HUVEC@0,K562@0,MCF7@0.0026665,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000235131.1 ENST00000416554.1 chr1:3628764-3630862 2 349 1747 intronic 0 1 0,0,1 0 0,0,0 62.1060171919771 0 0 33.8252148997135 0 0 44.5644699140401 0 0 0 0 chimp,elephant,guinea_pig,human,macaque,marmoset,orangutan, antisense antisense A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000227372.4 ENST00000418088.1 chr1:3652548-3663340 6 3323 7459 exonic 29.71 1 0,1,1 0 0,0,0 5.60637977730966 0 0 8.28167318687933 0 0 60.8919650917845 91.9612548599008 59.042 0 0 chimp,human,orangutan, lincRNA processed_transcript A549@2.18237,AG04450@1.38953,BJ@4.09117,GM12878@2.65402,H1HESC@14.4966,HELAS3@6.90259,HEPG2@8.23026,HMEC@2.46675,HSMM@3.55581,HUVEC@4.80542,K562@6.80527,MCF7@0.001707,NHEK@2.67885,NHLF@3.04528,SKNSHRA@11.7638, 0 0 0 0 ENSG00000227372.4 ENST00000452079.1 chr1:3652548-3663886 4 6354 4978 exonic 29.71 1 1,1,1 1 0,0,0 2.93201133144476 0 0 4.33112999685238 0 0 47.1525023607176 129.725592607473 1.944 0 0 chimp,human, lincRNA processed_transcript A549@2.18237,AG04450@1.38953,BJ@4.09117,GM12878@2.65402,H1HESC@14.4966,HELAS3@6.90259,HEPG2@8.23026,HMEC@2.46675,HSMM@3.55581,HUVEC@4.80542,K562@6.80527,MCF7@0.001707,NHEK@2.67885,NHLF@3.04528,SKNSHRA@11.7638, 0 0 0 0 ENSG00000244553.1 ENST00000419973.1 chr1:3652739-3654439 3 654 1042 exonic 6.81 0 0,1,0 0 0,0,0 3.86850152905199 0 0 5.63455657492355 0 0 7.5045871559633 0 3.402 0 0 chimp,human,marmoset,orangutan, lincRNA processed_transcript A549@0.041911,AG04450@0.0223705,BJ@0.0173135,GM12878@0.0096565,H1HESC@0.068648,HELAS3@0.022492,HEPG2@0.01161,HMEC@0.0256,HSMM@0,HUVEC@0.0391585,K562@0.0576145,MCF7@0,NHEK@0.0202013,NHLF@0.009468,SKNSHRA@0.065571, 0 0 0 0 ENSG00000227372.4 ENST00000423764.1 chr1:3653713-3663900 5 2870 7309 intergenic 29.71 0 1,1,1 1 0,0,0 0 0 0 0 0 0 77.2825783972126 93.5136133533999 1.944 0 0 chimp,human,orangutan, lincRNA processed_transcript A549@2.18237,AG04450@1.38953,BJ@4.09117,GM12878@2.65402,H1HESC@14.4966,HELAS3@6.90259,HEPG2@8.23026,HMEC@2.46675,HSMM@3.55581,HUVEC@4.80542,K562@6.80527,MCF7@0.001707,NHEK@2.67885,NHLF@3.04528,SKNSHRA@11.7638, 0 0 0 0 ENSG00000227372.4 ENST00000544565.1 chr1:3659683-3662802 2 702 2415 intergenic 0 0 0,1,1 0 0,0,0 0 0 0 0 0 0 95.5327635327635 7.14824016563147 124.956 0 0 chimp,human,macaque,orangutan,platypus, lincRNA processed_transcript A549@2.18237,AG04450@1.38953,BJ@4.09117,GM12878@2.65402,H1HESC@14.4966,HELAS3@6.90259,HEPG2@8.23026,HMEC@2.46675,HSMM@3.55581,HUVEC@4.80542,K562@6.80527,MCF7@0.001707,NHEK@2.67885,NHLF@3.04528,SKNSHRA@11.7638, 0 0 0 0 ENSG00000235169.2 ENST00000444870.2 chr1:3689352-3692546 4 542 2646 intergenic 21.72 1 1,1,1 1 0,0,1 73.6678966789668 3.28571428571429 0 88.1512915129151 5.83673469387755 0 103.409594095941 4.96447467876039 0 0 0 cat,chimp,cow,dog,elephant,guinea_pig,horse,human,macaque,marmoset,opossum,orangutan,panda,pig,rabbit,rat, antisense antisense A549@0.108845,AG04450@0.208457,BJ@0.237225,GM12878@0.0205125,H1HESC@0.389508,HELAS3@0.70439,HEPG2@2.54582,HMEC@0.088332,HSMM@0.0037685,HUVEC@0.122369,K562@1.73562,MCF7@0.039153,NHEK@0.165761,NHLF@0.0286145,SKNSHRA@1.10382, 0 0 0 0 ENSG00000235169.2 ENST00000452264.1 chr1:3689389-3691952 2 445 2116 intergenic 0 0 0,1,0 1 0,0,1 0 0 0 9.4561797752809 4.96975425330813 0 19.323595505618 5.16635160680529 0 0 0 chimp,human,macaque,marmoset,orangutan, antisense antisense A549@0.108845,AG04450@0.208457,BJ@0.237225,GM12878@0.0205125,H1HESC@0.389508,HELAS3@0.70439,HEPG2@2.54582,HMEC@0.088332,HSMM@0.0037685,HUVEC@0.122369,K562@1.73562,MCF7@0.039153,NHEK@0.165761,NHLF@0.0286145,SKNSHRA@1.10382, 0 0 0 0 ENSG00000236423.1 ENST00000413332.1 chr1:3816936-3822096 3 631 4525 intergenic 5.11 0 0,1,0 1 0,0,0 0 0 0 0 2.82762430939226 18.81 0 5.8724861878453 22.115 0 0 chimp,human,macaque,orangutan, lincRNA processed_transcript A549@0.079641,AG04450@0.0621905,BJ@0.200302,GM12878@0.118668,H1HESC@0.310207,HELAS3@0.931486,HEPG2@1.10588,HMEC@0.050502,HSMM@0.086971,HUVEC@0.0598585,K562@0.093387,MCF7@0.058194,NHEK@0.0861973,NHLF@0.0178785,SKNSHRA@0.307233, 0 0 0 0 ENSG00000236423.1 ENST00000442673.1 chr1:3816968-3833789 2 3057 13762 intergenic 12.75 0 1,1,1 1 0,0,0 0 2.50457782299084 0 0 3.27619532044761 18.81 0 5.81826769364918 22.115 0 0 chimp,human,macaque,orangutan, lincRNA processed_transcript A549@0.079641,AG04450@0.0621905,BJ@0.200302,GM12878@0.118668,H1HESC@0.310207,HELAS3@0.931486,HEPG2@1.10588,HMEC@0.050502,HSMM@0.086971,HUVEC@0.0598585,K562@0.093387,MCF7@0.058194,NHEK@0.0861973,NHLF@0.0178785,SKNSHRA@0.307233, 0 0 0 0 ENSG00000236423.1 ENST00000439488.1 chr1:3816980-3832011 4 1936 13089 intergenic 7.30 1 0,1,1 1 0,0,0 0 2.6333562533425 0 0 3.44464817785927 18.81 0 6.11742684697074 22.115 0 0 chimp,human,macaque,marmoset,orangutan, lincRNA processed_transcript A549@0.079641,AG04450@0.0621905,BJ@0.200302,GM12878@0.118668,H1HESC@0.310207,HELAS3@0.931486,HEPG2@1.10588,HMEC@0.050502,HSMM@0.086971,HUVEC@0.0598585,K562@0.093387,MCF7@0.058194,NHEK@0.0861973,NHLF@0.0178785,SKNSHRA@0.307233, 0 0 0 0 ENSG00000233304.1 ENST00000456897.1 chr1:4000673-4009411 3 558 8176 intergenic 4.18 0 0,0,0 0 0,0,0 0 0 0 6.7741935483871 5.2649217221135 0 11.5501792114695 342.805895303327 0 0 0 chimp,human,macaque,marmoset,orangutan, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0.0161565,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000233304.1 ENST00000412674.1 chr1:4000677-4015322 3 3239 11402 intergenic 3.29 0 0,0,0 0 0,0,0 0 0 0 1.16702686014202 3.775302578495 0 1.9898116702686 343.709612348711 0 0 0 chimp,human,marmoset,orangutan, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0.0161565,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000226374.1 ENST00000425194.1 chr1:4007209-4009040 3 934 893 intergenic 5.79 1 0,1,1 0 0,0,0 0 0 0 0 0 0 0 0 0 0 0 chimp,human,marmoset,orangutan, lincRNA lincRNA A549@0.0023165,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0.0173595,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000235054.1 ENST00000423197.1 chr1:4472111-4484747 6 2071 10555 intergenic 3.34 1 0,0,1 0 0,0,0 0 5.01117953576504 0 2.47271849348141 10.5677877783041 0 5.39063254466441 10.9544291804832 0 0 0 chimp,human,macaque,marmoset,orangutan, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000227169.1 ENST00000438791.1 chr1:4611795-4612205 2 354 54 intergenic 0 0 0,1,0 0 0,0,0 0 0 89.408 0 0 127.16 0 0 136.588 0 0 chimp,elephant,horse,human,macaque,marmoset,orangutan,pig, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000232596.1 ENST00000420522.1 chr1:4631608-4643481 5 677 11188 intergenic -2.14 0 0,0,0 0 0,0,0 0 3.25706113693243 0 0 1.82159456560601 0 0 3.57686807293529 0 0 0 chimp,human,macaque,marmoset,orangutan, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000231510.1 ENST00000443270.1 chr1:5146519-5150959 4 445 3989 intergenic 2.46 0 0,0,0 0 0,0,0 0 0 0 0 1.85510152920531 0 0 1.91326146903986 0 0 0 chimp,human,macaque,marmoset,orangutan, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0.064597,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000236948.1 ENST00000413887.1 chr1:5647428-5728355 2 361 80564 intergenic 2.64 0 0,0,0 0 0,0,0 0 2.81080879797428 0 0 5.92218608807904 14.34 119.706371191136 14.1651854426295 15.06 0 0 chimp,human,orangutan, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0.040901,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0.076103, 0 0 0 0 ENSG00000226944.1 ENST00000455744.1 chr1:6264900-6265840 3 375 561 intergenic 0 0 0,0,1 0 0,0,0 0 0 0 8.16 0 68.313 8.288 0 85.485 0 0 chimp,horse,human,macaque,marmoset,orangutan,panda, antisense antisense A549@0.0905505,AG04450@0.051145,BJ@0.0234075,GM12878@0.0463155,H1HESC@0,HELAS3@0.0310145,HEPG2@0,HMEC@0,HSMM@0.007996,HUVEC@0.0055875,K562@0.090269,MCF7@0,NHEK@0.0263123,NHLF@0.012086,SKNSHRA@0.0573095, 0 0 0 0 ENSG00000225077.2 ENST00000441724.1 chr1:6296300-6299000 5 1133 1559 intergenic 6.16 0 0,1,0 1 0,0,0 0 0 49.968 1.26566637246249 0 142.64 15.7616946160635 2.3181526619628 121.35 0 0 chimp,human,macaque,marmoset,orangutan, antisense antisense A549@0.128033,AG04450@0.0036175,BJ@0.0122615,GM12878@0.0519295,H1HESC@1.11635,HELAS3@0.527464,HEPG2@0.131644,HMEC@0.019574,HSMM@0.031338,HUVEC@0.019545,K562@0.0551185,MCF7@0.352298,NHEK@0.0636473,NHLF@0.005961,SKNSHRA@0.0375385, 0 0 0 0 ENSG00000225077.2 ENST00000429480.2 chr1:6297831-6299504 2 1300 371 intergenic 6.16 0 0,0,1 0 0,0,0 0 0 0 1.10307692307692 0 0 3.36461538461538 0 0 0 0 chimp,cow,human,macaque,marmoset,orangutan,pig, antisense antisense A549@0.128033,AG04450@0.0036175,BJ@0.0122615,GM12878@0.0519295,H1HESC@1.11635,HELAS3@0.527464,HEPG2@0.131644,HMEC@0.019574,HSMM@0.031338,HUVEC@0.019545,K562@0.0551185,MCF7@0.352298,NHEK@0.0636473,NHLF@0.005961,SKNSHRA@0.0375385, 0 0 0 0 ENSG00000231868.1 ENST00000419034.1 chr1:6503094-6507066 3 348 3620 exonic 0 1 0,0,0 0 0,0,0 2.74712643678161 19.7853591160221 0 0 59.8632596685083 86.942 10.6810344827586 69.4127071823204 55.537 0 0 chimp,dog,elephant,horse,human,macaque,marmoset,orangutan,pig, antisense antisense A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0.00705,HELAS3@0.0226835,HEPG2@0.0455285,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000228750.1 ENST00000432429.1 chr1:6784697-6787468 2 1684 1085 intergenic 1.13 0 0,0,1 0 0,0,0 5.23218527315914 25.6645161290323 36.855 42.3361045130641 15.3585253456221 20.813 5.91686460807601 20.9096774193548 23.919 0 0 chimp,human,orangutan, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0.0065255,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000228750.1 ENST00000414210.1 chr1:6784697-6790072 2 505 4868 intergenic 4.59 1 0,0,1 0 0,0,0 75.8257425742574 8.25986031224322 36.855 163.035643564356 6.00883319638455 20.813 50.3346534653465 8.14564502875924 23.919 0 0 chimp,cow,dog,elephant,guinea_pig,horse,human,macaque,marmoset,mouse,opossum,orangutan,panda,platypus,rabbit,rat, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0.0065255,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000228750.1 ENST00000421469.1 chr1:6787587-6790072 2 377 2106 intergenic 4.59 1 0,1,1 0 0,0,0 78.1989389920424 5.87037037037037 0 29.2811671087533 5.97673314339981 0 40.9946949602122 8.05603038936372 0 0 0 cat,chimp,cow,dog,elephant,guinea_pig,horse,human,macaque,marmoset,orangutan,panda,platypus,rabbit, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0.0065255,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000237436.1 ENST00000442889.1 chr1:6843952-6844903 3 412 535 intergenic 0 1 1,1,1 0 0,0,0 181.893203883495 48.6728971962617 210.158 34.5 93.1813084112149 512.61 29.9805825242718 75.0990654205607 503.212 0 0 chimp,human,macaque,marmoset,orangutan, antisense antisense A549@0.251126,AG04450@0.0224255,BJ@0.0059325,GM12878@0.474681,H1HESC@0.143869,HELAS3@0.474374,HEPG2@0.355564,HMEC@0.039466,HSMM@0.105723,HUVEC@0.105053,K562@0.803096,MCF7@0.466313,NHEK@0.0249167,NHLF@0.0188065,SKNSHRA@0.261628, 0 0 0 0 ENSG00000237365.1 ENST00000456701.1 chr1:7068436-7074339 2 347 5554 intronic -0.36 0 0,1,1 0 0,0,0 0 12.1665466330573 47.34 8.63688760806916 13.5857039971192 53.576 9.25648414985591 16.453366942744 61.715 0 0 cat,chimp,dog,elephant,horse,human,macaque,marmoset,orangutan,panda,rabbit, antisense antisense A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0.0281535,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000237402.1 ENST00000427317.1 chr1:7429003-7430331 2 363 963 intronic 0.65 1 0,0,1 0 0,0,0 96.8044077134986 0 0 124.429752066116 0 0 141.884297520661 0 0 0 0 cat,chimp,elephant,horse,human,macaque,marmoset,orangutan,panda, sense_intronic sense_intronic A549@0.006562,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0.0052925,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000237728.1 ENST00000457311.1 chr1:7442548-7449814 3 429 6833 intronic -4.13 0 0,0,0 0 0,0,0 0 11.4866091028831 0 0 9.52202546465681 0 0 15.4986096882775 0 0 0 chimp,horse,human,macaque,orangutan, antisense antisense A549@0,AG04450@0.0057325,BJ@0,GM12878@0,H1HESC@0,HELAS3@0.0135755,HEPG2@0,HMEC@0,HSMM@0.0052625,HUVEC@0.0089385,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000237728.1 ENST00000411708.1 chr1:7448243-7449479 2 389 845 intronic -6.94 1 0,0,0 0 0,0,0 0 0 0 0 0 0 0 0 0 0 0 chimp,horse,human,macaque,marmoset,orangutan, antisense antisense A549@0,AG04450@0.0057325,BJ@0,GM12878@0,H1HESC@0,HELAS3@0.0135755,HEPG2@0,HMEC@0,HSMM@0.0052625,HUVEC@0.0089385,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000225126.1 ENST00000440032.1 chr1:7501156-7501614 2 359 97 intronic -7.32 0 0,1,0 0 0,0,0 0 0 130.374 0 0 155.237 0 0 174.978 0 0 chimp,horse,human,macaque,marmoset,orangutan, antisense antisense A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0.009921,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000236266.1 ENST00000451646.1 chr1:7870302-7887402 3 827 16269 exonic 6.47 0 1,1,1 1 0,0,0 38.2636033857316 3.56997971602434 0 20.8851269649335 1.77306533898826 5.383 40.6408706166868 6.5377712213412 12.016 0 0 chimp,human,macaque,marmoset,orangutan, antisense antisense A549@0.002615,AG04450@0.116032,BJ@0.0116625,GM12878@0,H1HESC@0.0049985,HELAS3@0,HEPG2@0.0052425,HMEC@0,HSMM@0.671571,HUVEC@0.054909,K562@1.02775,MCF7@0,NHEK@0.00634833,NHLF@0.032598,SKNSHRA@0.0216065, 0 0 0 0 ENSG00000225820.1 ENST00000423628.1 chr1:8066074-8066784 2 408 300 intergenic -5.14 0 0,0,1 0 0,0,0 0 0 0 0 0 0 0 0 0 0 0 chimp,human,marmoset,orangutan, sense_intronic sense_intronic A549@0.0690235,AG04450@0.027287,BJ@0,GM12878@0.0097545,H1HESC@0,HELAS3@0.01762,HEPG2@0.009969,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0.018508,NHLF@0,SKNSHRA@0.029693, 2 44 0 0 ENSG00000238290.1 ENST00000445300.1 chr1:8086798-8182762 3 2041 93919 intergenic 1.47 0 0,1,1 0 0,0,0 0 10.5691180698261 21.84 1.79176874081333 11.0942194870048 55.292 1.96766291033807 19.2214993771228 56.083 0 0 chimp,human,macaque,marmoset,orangutan, lincRNA processed_transcript A549@0.362167,AG04450@0.0793225,BJ@0.0135895,GM12878@0,H1HESC@0.028598,HELAS3@0.135897,HEPG2@0.665982,HMEC@0.026042,HSMM@0.0742165,HUVEC@0.107052,K562@0.005334,MCF7@0.0811255,NHEK@0.0167273,NHLF@0.017936,SKNSHRA@0.0421975, 0 0 0 0 ENSG00000227634.1 ENST00000452982.1 chr1:8268732-8275270 4 493 6039 intergenic -3.61 1 0,0,1 0 0,0,0 0 3.04686206325551 0 0 3.92631230336148 0 0 5.33151183970856 0 0 0 chimp,human,macaque,marmoset,orangutan, lincRNA lincRNA A549@0.0123435,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0.090927,HEPG2@0.284848,HMEC@0.016477,HSMM@0.0133135,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0.003926,SKNSHRA@0, 0 0 0 0 ENSG00000233645.1 ENST00000424689.1 chr1:8278250-8280589 2 475 1862 intergenic -0.48 1 0,0,0 0 0,0,0 0 0 0 0 3.90655209452202 0 0 7.28356605800215 0 0 0 chimp,human,macaque,marmoset,orangutan, lincRNA lincRNA A549@0,AG04450@0.01352,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0.004779,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000232912.1 ENST00000449895.1 chr1:8484705-8494898 4 512 9675 intronic -1.02 0 0,1,0 0 0,0,0 38.671875 40.1339534883721 55.444 6.46875 25.4004134366925 139.951 4.412109375 25.5454263565892 146.467 0 0 cat,chimp,human,macaque,marmoset,orangutan,panda, antisense antisense A549@0,AG04450@0.0057375,BJ@0.0112165,GM12878@0.019863,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0.007935,HSMM@0.0039875,HUVEC@0,K562@0,MCF7@0,NHEK@0.005117,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000232912.1 ENST00000444276.1 chr1:8485698-8490101 3 436 3963 intronic -1.48 1 0,0,1 0 0,0,0 0 65.7320211960636 148.05 7.59633027522936 57.597022457734 17.492 5.18119266055046 57.8629825889478 17.841 0 0 cat,chimp,cow,dog,elephant,horse,human,macaque,marmoset,orangutan,panda,rabbit, antisense antisense A549@0,AG04450@0.0057375,BJ@0.0112165,GM12878@0.019863,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0.007935,HSMM@0.0039875,HUVEC@0,K562@0,MCF7@0,NHEK@0.005117,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000228423.1 ENST00000433876.1 chr1:8865919-8867110 2 351 838 intronic -2.11 0 0,0,0 0 0,0,0 0 0 0 66.9173789173789 0 0 73.5897435897436 0 1.701 0 0 cat,chimp,cow,dog,elephant,guinea_pig,horse,human,macaque,marmoset,orangutan,panda,pig,rabbit, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000236269.1 ENST00000414948.1 chr1:8935847-8938066 2 742 1475 intronic -4.41 0 0,1,0 1 0,0,0 0 0 0 2.00539083557951 1.13423728813559 3.944 3.044474393531 1.19118644067797 11.93 0 0 chimp,human,macaque,marmoset,orangutan, sense_intronic sense_intronic A549@1.00872,AG04450@0.200478,BJ@0.262876,GM12878@0.869074,H1HESC@0.425616,HELAS3@0.798921,HEPG2@1.21738,HMEC@0.440958,HSMM@0.401106,HUVEC@0.464225,K562@0.760294,MCF7@1.448,NHEK@0.441746,NHLF@0.27721,SKNSHRA@0.471351, 0 0 0 0 ENSG00000230679.1 ENST00000442636.1 chr1:8938894-8939953 2 454 603 intergenic -2.41 1 1,1,1 1 0,0,0 0 0 0 0 41.7495854063018 5.432 0 56.7694859038143 14.189 0 0 cat,chimp,horse,human,macaque,marmoset,orangutan,panda, antisense antisense A549@0.161715,AG04450@0.140339,BJ@0.0854635,GM12878@1.01664,H1HESC@0.231155,HELAS3@0.494681,HEPG2@0.178777,HMEC@0.107753,HSMM@0.0551205,HUVEC@0.0804805,K562@0.574818,MCF7@0.529725,NHEK@0.105813,NHLF@0.0765455,SKNSHRA@0.205461, 0 0 0 0 ENSG00000228526.1 ENST00000437157.1 chr1:9228327-9262678 4 544 33801 intergenic 8.02 0 0,1,1 0 0,0,0 85.1176470588235 11.3757285287418 42.837 33.2003676470588 8.64717020206503 48.603 23.3014705882353 8.36241531315642 53.74 0 0 cat,chimp,dog,elephant,horse,human,macaque,marmoset,mouse,orangutan,rabbit,rat, lincRNA lincRNA A549@0.40114,AG04450@0.554376,BJ@0.406064,GM12878@0.687102,H1HESC@0.686063,HELAS3@1.02432,HEPG2@1.03008,HMEC@0.052304,HSMM@0.150637,HUVEC@0.570695,K562@0,MCF7@0.194615,NHEK@0.112889,NHLF@0.03391,SKNSHRA@0.626919, 0 0 0 0 ENSG00000234546.1 ENST00000412639.1 chr1:9242271-9243855 2 267 1315 intergenic 0 0 0,1,0 1 0,0,0 0 12.9041825095057 45.999 0 0 38.89 0 4.80456273764259 34.878 0 0 human,macaque,orangutan, lincRNA lincRNA A549@0.265564,AG04450@0.950014,BJ@1.21499,GM12878@0.666146,H1HESC@0.578013,HELAS3@0.121523,HEPG2@0.18749,HMEC@1.08074,HSMM@0.452809,HUVEC@0.951479,K562@0,MCF7@0.347543,NHEK@0.903942,NHLF@0.338403,SKNSHRA@1.84526, 0 0 0 0 ENSG00000235263.1 ENST00000441033.1 chr1:9561151-9563530 2 706 1671 intergenic -1.31 0 0,1,0 0 0,0,0 12.7053824362606 0 0 2.52832861189802 0 0.92 7.3371104815864 0 0.972 0 0 cat,chimp,dog,horse,human,macaque,marmoset,orangutan, lincRNA lincRNA A549@0.009527,AG04450@0.008363,BJ@0.0091415,GM12878@0,H1HESC@0,HELAS3@0.235824,HEPG2@0.528601,HMEC@0,HSMM@0,HUVEC@0.009873,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0.0142755, 0 0 0 0 ENSG00000231789.1 ENST00000415330.1 chr1:9739858-9747632 3 980 6790 intronic 1.75 0 1,1,1 1 0,0,0 0 5.04035346097202 0 0 2.40942562592047 0 0 2.40942562592047 0 0 0 chimp,human,orangutan, lincRNA processed_transcript A549@2.79263,AG04450@2.70652,BJ@2.54018,GM12878@1.02091,H1HESC@11.5311,HELAS3@1.09342,HEPG2@5.16849,HMEC@0.716455,HSMM@2.007,HUVEC@0.339942,K562@5.77487,MCF7@0.273286,NHEK@0.27465,NHLF@0.683997,SKNSHRA@6.41965, 0 0 0 0 ENSG00000223989.1 ENST00000454104.1 chr1:9908376-9910212 3 421 1411 exonic -0.88 0 1,1,1 0 0,0,0 102.294536817102 0 36.908 69.8669833729216 0 19.381 109.914489311164 1.5024805102764 22.321 0 0 cat,chimp,dog,elephant,guinea_pig,horse,human,macaque,marmoset,orangutan,panda,rabbit, antisense antisense A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0.0627777,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000234374.1 ENST00000453140.1 chr1:9961518-9962174 2 204 450 intronic 0 0 0,0,0 0 0,0,0 0 0 0 51.4166666666667 48.1711111111111 7.441 51.8382352941177 42.4666666666667 12.707 0 0 cat,chimp,horse,human,macaque,marmoset,orangutan,panda, antisense antisense A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000228150.1 ENST00000445884.1 chr1:10002981-10010032 2 438 6611 intronic -5.06 0 0,1,0 0 0,0,0 0 0 0 0 4.70004537891393 17.222 0 5.53940402359703 18.339 0 0 chimp,cow,horse,human,macaque,marmoset,orangutan, processed_transcript processed_transcript A549@0.006896,AG04450@0,BJ@0.0136815,GM12878@0.056464,H1HESC@0.015362,HELAS3@0.042019,HEPG2@0.0313655,HMEC@0,HSMM@0.021121,HUVEC@0.022808,K562@0.117599,MCF7@0.0483075,NHEK@0.0688823,NHLF@0,SKNSHRA@0.0123885, 0 0 0 0 ENSG00000203469.2 ENST00000424487.1 chr1:10518612-10519395 2 465 316 exonic -4.54 0 0,1,1 0 0,0,0 0 0 0 0 0 0 0 0 0 0 0 chimp,human,macaque,marmoset,orangutan, antisense antisense A549@0.0237395,AG04450@0.0047995,BJ@0.0076615,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0.035046,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 1 96 0 0 ENSG00000226849.1 ENST00000452378.1 chr1:11128528-11133154 2 2680 1944 exonic 9.56 0 0,1,0 0 0,0,0 0 18.1301440329218 0 23.9925373134328 21.4747942386831 14.847 24.7925373134328 28.3739711934156 24.544 0 0 cat,chimp,elephant,horse,human,macaque,orangutan, antisense antisense A549@0.0806805,AG04450@0.0953275,BJ@0.108874,GM12878@0.197621,H1HESC@0.21812,HELAS3@0.332882,HEPG2@0.210996,HMEC@0.003053,HSMM@0.016502,HUVEC@0.068457,K562@0.0905945,MCF7@0.15962,NHEK@0.0138407,NHLF@0.0183365,SKNSHRA@0.303264, 0 0 0 0 ENSG00000230337.1 ENST00000447600.1 chr1:11159732-11162108 2 485 1889 exonic 0 1 0,1,1 0 0,0,0 0 0 0 63.9835051546392 0 0 68.4783505154639 0 0 0 0 cat,chimp,cow,horse,human,macaque,orangutan,panda, antisense antisense A549@0.167849,AG04450@0.0654485,BJ@0.326554,GM12878@0.150084,H1HESC@0.224822,HELAS3@1.75223,HEPG2@0.349187,HMEC@0.285083,HSMM@0.251478,HUVEC@0.18952,K562@0.193143,MCF7@0.241734,NHEK@0.122689,NHLF@0.08162,SKNSHRA@0.209649, 0 0 0 0 ENSG00000230337.1 ENST00000435388.1 chr1:11159732-11162157 2 438 1985 exonic 0 1 0,1,1 0 0,0,0 0 0 0 50.4337899543379 4.50478589420655 0 48.5525114155251 6.01813602015113 0 0 0 cow,horse,human,macaque,orangutan,panda, antisense antisense A549@0.167849,AG04450@0.0654485,BJ@0.326554,GM12878@0.150084,H1HESC@0.224822,HELAS3@1.75223,HEPG2@0.349187,HMEC@0.285083,HSMM@0.251478,HUVEC@0.18952,K562@0.193143,MCF7@0.241734,NHEK@0.122689,NHLF@0.08162,SKNSHRA@0.209649, 0 0 0 0 ENSG00000225602.1 ENST00000445982.1 chr1:11203955-11209594 4 701 4932 exonic 2.30 0 0,0,0 0 0,0,0 138.031383737518 49.2777777777778 65.59 83.6119828815977 37.7704785077048 72.431 78.0057061340942 43.955798864558 89.034 0 0 chimp,dog,human,macaque,marmoset,orangutan, antisense antisense A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0.006084,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0.00569033,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000225602.1 ENST00000420480.1 chr1:11204481-11209594 4 669 4438 exonic 2.30 0 0,0,0 0 0,0,0 144.26307922272 51.9869310500225 70.926 87.6113602391629 41.9747634069401 329.289 81.7369207772795 48.8485804416404 362.017 0 0 chimp,human,macaque,marmoset,orangutan, antisense antisense A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0.006084,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0.00569033,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000235643.1 ENST00000453135.1 chr1:11669588-11673412 3 1282 2538 intergenic 6.80 1 0,1,0 0 0,0,0 0 0 0 0 0 0 0 0 0 0 0 chimp,human,orangutan, lincRNA lincRNA A549@0.0361625,AG04450@0,BJ@0,GM12878@0.0137055,H1HESC@0.006938,HELAS3@0.357699,HEPG2@0.243704,HMEC@0,HSMM@0.006405,HUVEC@0.011353,K562@0.274475,MCF7@0.0096005,NHEK@0.00513,NHLF@0,SKNSHRA@0.0017685, 0 0 0 0 ENSG00000177553.6 ENST00000376620.3 chr1:11837134-11839676 3 1865 673 exonic 3.89 0 0,0,0 0 0,0,0 0 0 0 0 8.66419019316493 21.67 4.86809651474531 6.97622585438336 32.906 0 0 chimp,human,macaque,orangutan,panda, antisense antisense A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0.0774895,HUVEC@0,K562@0.0026295,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000236997.1 ENST00000442242.1 chr1:11882854-11883337 2 430 51 exonic -7.66 0 0,0,0 0 0,0,0 8.98604651162791 0 41.328 6.23255813953488 0 52.899 8.26744186046512 0 69.455 0 0 chimp,human,macaque,marmoset,orangutan, antisense antisense A549@0.0574835,AG04450@0,BJ@0.008282,GM12878@0.0147585,H1HESC@0,HELAS3@0.0193245,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000242349.1 ENST00000400892.2 chr1:11903918-11908136 3 933 3281 exonic 0.25 0 0,0,1 0 0,0,0 105.93783494105 39.3831149039927 32.292 150.08038585209 35.558366351722 41.567 144.700964630225 37.4760743675709 54.65 0 0 chimp,cow,horse,human,macaque,marmoset,opossum,orangutan,pig,rabbit, processed_transcript non_coding A549@0.137535,AG04450@0.0575915,BJ@0.0608445,GM12878@0.168929,H1HESC@0.131211,HELAS3@0.125798,HEPG2@0.248302,HMEC@0.172525,HSMM@0.115109,HUVEC@0.291077,K562@0.209175,MCF7@0.093073,NHEK@0.199404,NHLF@0.0693495,SKNSHRA@0.112303, 0 0 0 0 ENSG00000229484.1 ENST00000416696.1 chr1:12587766-12588462 2 436 258 intergenic 2.08 0 0,1,1 0 0,0,0 0 0 0 0 0 0 0 0 0 0 0 chimp,cow,human,macaque,marmoset,orangutan,pig, lincRNA lincRNA A549@0.021874,AG04450@0.007362,BJ@0.011242,GM12878@0,H1HESC@0,HELAS3@0.148285,HEPG2@0.50933,HMEC@0,HSMM@0,HUVEC@0.038164,K562@0.0212045,MCF7@0.00459,NHEK@0.005829,NHLF@0,SKNSHRA@0.05374, 0 0 0 0 ENSG00000228338.1 ENST00000438401.1 chr1:12882549-12883022 2 376 95 intergenic -5.84 0 0,0,0 0 0,0,0 0 0 0 0 0 0 0 0 0 0 0 chimp,horse,human,macaque,marmoset,orangutan, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 15 5 31 3 ENSG00000233336.1 ENST00000437631.1 chr1:13146777-13147256 2 382 95 intergenic -6.46 0 0,0,0 0 0,0,0 0 0 0 0 0 0 0 0 0 0 0 chimp,human,macaque,marmoset,orangutan, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 15 5 0 0 ENSG00000235800.1 ENST00000451598.1 chr1:13385417-13385903 2 377 107 intergenic 4.75 0 0,1,0 0 0,0,0 0 0 0 0 0 0 0 0 0 0 0 chimp,horse,human,macaque,marmoset,orangutan, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0.0197435,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 15 5 31 3 ENSG00000228229.1 ENST00000432559.1 chr1:13429634-13430107 2 376 95 intergenic -6.55 0 0,0,0 0 0,0,0 0 0 0 0 0 0 0 0 0 0 0 chimp,human,macaque,marmoset,orangutan, antisense antisense A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 15 5 31 3 ENSG00000236652.1 ENST00000417907.1 chr1:13650431-13650910 2 382 95 intergenic -6.55 0 0,0,0 0 0,0,0 0 0 0 0 0 0 0 0 0 0 0 chimp,human,macaque,marmoset,orangutan, antisense antisense A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 15 5 0 0 ENSG00000229350.1 ENST00000450259.1 chr1:13839715-13842765 3 474 2572 exonic 4.72 0 0,1,0 0 0,0,0 69.8481012658228 41.3569206842924 34.454 199.069620253165 75.6259720062208 179.015 213.508438818565 85.2146189735614 193.084 0 0 cat,chimp,cow,dog,elephant,guinea_pig,horse,human,macaque,marmoset,mouse,opossum,orangutan,panda,pig,rabbit,rat, antisense ambiguous_orf A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0.011128,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000237445.1 ENST00000441809.1 chr1:13983806-13987033 2 1005 2220 intergenic -3.02 0 0,0,0 0 0,0,0 0 0 0 155.780099502488 0 0 339.285572139303 3.36756756756757 0 0 0 cat,chimp,cow,dog,guinea_pig,horse,human,macaque,marmoset,mouse,opossum,orangutan,panda,pig,rabbit,rat, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0.00412,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000227612.1 ENST00000420227.1 chr1:14104760-14105625 2 406 457 exonic 1.94 0 0,1,0 0 0,0,0 124.137931034483 185.46170678337 417.057 89.7290640394089 183.326039387309 264.806 128.660098522167 239.796498905908 332.039 0 0 chimp,dog,elephant,guinea_pig,horse,human,macaque,marmoset,opossum,orangutan,panda,pig,platypus, antisense antisense A549@0,AG04450@0,BJ@0.0060345,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000231606.1 ENST00000449215.1 chr1:14548386-14549613 2 280 945 intergenic -1.49 0 0,0,0 0 0,0,0 132.878571428571 19.7269841269841 19.12 219.196428571429 13.3851851851852 16.062 142.496428571429 11.189417989418 20.881 0 0 cat,chimp,cow,dog,guinea_pig,horse,human,macaque,marmoset,mouse,opossum,orangutan,panda,platypus,rabbit,rat, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000234593.1 ENST00000447908.1 chr1:14675450-14677518 2 577 1489 intergenic -4.14 0 0,1,1 0 0,0,0 0 0 0 0 0 0 5.05372616984402 0 0 0 0 cat,chimp,human,macaque,marmoset,orangutan,panda, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@1.39297,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000175147.7 ENST00000404665.2 chr1:15442448-15478898 5 2775 33667 exonic 4.10 0 0,1,1 1 0,0,0 0 0.590013960257819 0 0 1.51661864734013 10.129 1.22594594594595 2.00751477708141 13.363 0 0 chimp,elephant,human,macaque,marmoset,orangutan,panda, lincRNA processed_transcript A549@0.23795,AG04450@0.0737885,BJ@0.0020495,GM12878@0.0169345,H1HESC@0.366664,HELAS3@0.401416,HEPG2@2.09733,HMEC@0.400653,HSMM@0.00074,HUVEC@0.016854,K562@0.0016705,MCF7@0.188951,NHEK@0.336109,NHLF@0.0048665,SKNSHRA@1.20776, 0 0 0 0 ENSG00000175147.7 ENST00000310916.3 chr1:15442449-15478960 6 2956 33545 exonic 4.10 0 0,1,1 1 0,0,0 0 0.592159785362945 0 0 1.52213444626621 10.129 1.15087956698241 2.01481591891489 13.363 0 0 chimp,human,macaque,marmoset,orangutan,panda, lincRNA processed_transcript A549@0.23795,AG04450@0.0737885,BJ@0.0020495,GM12878@0.0169345,H1HESC@0.366664,HELAS3@0.401416,HEPG2@2.09733,HMEC@0.400653,HSMM@0.00074,HUVEC@0.016854,K562@0.0016705,MCF7@0.188951,NHEK@0.336109,NHLF@0.0048665,SKNSHRA@1.20776, 0 0 0 0 ENSG00000233485.1 ENST00000428747.1 chr1:15653176-15670372 2 3103 14091 exonic 8.32 0 0,0,0 0 0,0,0 30.1646793425717 3.342559080264 0 49.9787302610377 4.61152508693492 3.968 50.1882049629391 4.69036973955007 4.24 0 0 chimp,human,marmoset,orangutan, antisense antisense A549@0.001785,AG04450@0,BJ@0.0019455,GM12878@0,H1HESC@0.00309,HELAS3@0.015252,HEPG2@0.009308,HMEC@0,HSMM@0,HUVEC@0.0031325,K562@0,MCF7@0,NHEK@0.000848333,NHLF@0.0006285,SKNSHRA@0, 0 0 0 0 ENSG00000236045.1 ENST00000439788.1 chr1:15660662-15661960 2 725 571 intronic 5.57 0 0,0,0 0 0,0,0 0 0 0 6.92965517241379 0 0 6.99586206896552 0 0 0 0 cat,chimp,horse,human,macaque,marmoset,orangutan, antisense antisense A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0.020633,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000228140.1 ENST00000427824.1 chr1:15729475-15735929 3 5175 1275 intergenic 4.28 1 0,1,1 0 0,0,0 20.7513043478261 0 44.487 26.6144927536232 3.61882352941176 224.182 22.560193236715 4.39843137254902 237.551 0 0 human,macaque,marmoset,orangutan, lincRNA processed_transcript A549@0.035442,AG04450@0.0080995,BJ@0.004534,GM12878@0.0842295,H1HESC@0.0393055,HELAS3@0.0973005,HEPG2@0.017001,HMEC@0.011071,HSMM@0.001675,HUVEC@0.0344225,K562@0.019353,MCF7@0.049892,NHEK@0.007433,NHLF@0.0082565,SKNSHRA@0.043973, 0 0 0 0 ENSG00000237301.1 ENST00000428945.1 chr1:15912631-15930121 2 2843 14645 intergenic 12.20 0 0,1,0 0 0,0,0 0 2.22895186070331 11.532 4.02919451283855 4.61051553431205 8.421 5.76433345058037 5.48842608398771 11.789 0 0 chimp,human,orangutan, lincRNA processed_transcript A549@0.031318,AG04450@0.005498,BJ@0.0143015,GM12878@0.0037335,H1HESC@0.0515895,HELAS3@0.103915,HEPG2@0.0639215,HMEC@0.008635,HSMM@0.0016025,HUVEC@0.012134,K562@0.0063715,MCF7@0.145568,NHEK@0.00530033,NHLF@0.0103695,SKNSHRA@0.0728375, 0 0 0 0 ENSG00000237938.1 ENST00000453804.1 chr1:16049214-16063391 4 641 13530 exonic 8.55 0 0,0,0 0 0,0,0 158.051482059282 57.2765705838877 0 119.622464898596 84.719364375462 0 125.079563182527 94.4838137472285 0 0 0 cat,chimp,cow,dog,elephant,guinea_pig,horse,human,macaque,marmoset,mouse,orangutan,panda,pig,rabbit, antisense antisense A549@0,AG04450@0.016306,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0.00319,HUVEC@0.00828,K562@0.0036,MCF7@0.003117,NHEK@0.001979,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000224459.1 ENST00000418525.1 chr1:16066546-16076391 2 637 9206 exonic 2.92 0 0,0,1 0 0,0,0 0 20.762763415164 15.635 19.9905808477237 36.9859873995221 20.567 20.1459968602826 39.250054312405 21.528 0 0 cat,chimp,cow,elephant,guinea_pig,horse,human,macaque,marmoset,orangutan,panda,pig, antisense antisense A549@0.006794,AG04450@0.013778,BJ@0.033246,GM12878@0,H1HESC@0.009205,HELAS3@0.052258,HEPG2@0.468582,HMEC@0.019224,HSMM@0.0271495,HUVEC@6.72605,K562@0,MCF7@0.0032175,NHEK@0,NHLF@0,SKNSHRA@0.161818, 0 0 0 0 ENSG00000179743.2 ENST00000535249.1 chr1:16160560-16162355 1 1795 0 intergenic 1.94 0 1,1,1 1 0,0,0 0 0 0 36.1649025069638 0 15.897 40.4735376044568 0 17.59 0 0 chimp,cow,human,macaque,orangutan, lincRNA processed_transcript A549@0.517982,AG04450@0.233206,BJ@0.36236,GM12878@0.884943,H1HESC@1.42545,HELAS3@1.18014,HEPG2@1.49151,HMEC@0.200971,HSMM@0.475099,HUVEC@0.936382,K562@2.64084,MCF7@1.421,NHEK@0.16761,NHLF@0.17149,SKNSHRA@1.7237, 0 0 0 0 ENSG00000179743.2 ENST00000317122.1 chr1:16160974-16174642 2 2466 11200 exonic 2.79 0 0,1,1 0 0,0,0 5.45012165450122 17.685 0 36.360502838605 43.8727678571429 49.21 38.6670721816707 46.4375892857143 30.785 0 0 cow,human,macaque,orangutan,rabbit, lincRNA processed_transcript A549@0.517982,AG04450@0.233206,BJ@0.36236,GM12878@0.884943,H1HESC@1.42545,HELAS3@1.18014,HEPG2@1.49151,HMEC@0.200971,HSMM@0.475099,HUVEC@0.936382,K562@2.64084,MCF7@1.421,NHEK@0.16761,NHLF@0.17149,SKNSHRA@1.7237, 0 0 0 0 ENSG00000233078.1 ENST00000437156.1 chr1:16332655-16333166 2 464 45 exonic 0.13 0 0,1,0 0 0,0,0 0 0 0 41.9568965517241 0 0 44.7478448275862 0 0 0 0 cat,chimp,elephant,horse,human,macaque,marmoset,orangutan, antisense antisense A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0.035829,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000227959.1 ENST00000424774.1 chr1:16481706-16483824 2 902 1214 intronic 3.40 1 1,1,1 1 0,0,0 21.0731707317073 24.4481054365733 38.108 28.2128603104213 67.5107084019769 55.769 30.2461197339246 78.0510708401977 59.113 0 0 cat,chimp,cow,dog,elephant,guinea_pig,horse,human,macaque,marmoset,mouse,orangutan,pig,rat, antisense antisense A549@0.0756095,AG04450@0.0490035,BJ@0.231363,GM12878@0,H1HESC@0.0714415,HELAS3@0.569713,HEPG2@0.637821,HMEC@0.586999,HSMM@0.0351835,HUVEC@0.130194,K562@0.005137,MCF7@0.108271,NHEK@0.210241,NHLF@0.159344,SKNSHRA@0.092305, 0 0 0 0 ENSG00000224621.1 ENST00000426353.1 chr1:16485761-16488378 2 542 2073 intergenic 1.89 0 0,0,0 0 0,0,0 47.2546125461255 0 0 81.380073800738 1.383502170767 9.916 89.7416974169742 1.45972021225277 10.029 0 0 cat,chimp,elephant,horse,human,macaque,marmoset,orangutan,pig,rabbit, antisense antisense A549@0.07874,AG04450@0.234811,BJ@0.0597685,GM12878@0.007411,H1HESC@0.234973,HELAS3@1.22719,HEPG2@0.576872,HMEC@0.448224,HSMM@0.048244,HUVEC@0.208432,K562@0.048124,MCF7@0.589184,NHEK@0.257979,NHLF@0.0786295,SKNSHRA@0.107775, 0 0 0 0 ENSG00000234166.1 ENST00000457809.1 chr1:16524349-16524852 2 437 64 exonic -3.94 0 0,1,1 0 0,0,0 0 0 0 4.37528604118993 0 4.67 4.74141876430206 0 7.803 0 0 chimp,horse,human,macaque,marmoset,orangutan,pig, antisense antisense A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000226029.1 ENST00000457898.1 chr1:16787443-16794976 2 3243 4288 intergenic -1.59 0 0,1,0 0 0,0,0 0 3.38619402985075 22.8 0 0.724580223880597 27.489 0 0.736707089552239 20.915 0 0 chimp,human,macaque,marmoset,orangutan, lincRNA lincRNA A549@0.154387,AG04450@0.247633,BJ@0.232744,GM12878@0.217492,H1HESC@0.139186,HELAS3@0.274209,HEPG2@0.204582,HMEC@0.258532,HSMM@0.136236,HUVEC@0.315822,K562@0.289069,MCF7@0.168569,NHEK@0.375255,NHLF@0.30537,SKNSHRA@0.253216, 0 0 0 0 ENSG00000224174.1 ENST00000452795.1 chr1:16847189-16848303 2 340 772 intergenic 0.25 0 0,1,1 1 0,0,0 0 0 0 0 0 18.352 0 0 19.166 0 0 chimp,guinea_pig,human,macaque,marmoset,orangutan, lincRNA lincRNA A549@0.206543,AG04450@0.0662015,BJ@0.0568525,GM12878@0,H1HESC@0.406437,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0.012682,HUVEC@0.0845735,K562@0,MCF7@0.023781,NHEK@0.053124,NHLF@0.0170525,SKNSHRA@0.013291, 4 8 1 8 ENSG00000241374.1 ENST00000427204.1 chr1:16859035-16861505 3 690 1776 intergenic 0.20 0 0,0,0 0 0,0,0 0 0 0 0 0 14.904 0 0 15.336 0 0 chimp,human,macaque,orangutan,panda, lincRNA processed_transcript A549@0.929576,AG04450@0,BJ@0.415826,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0.0013015,MCF7@0,NHEK@0,NHLF@0.0010935,SKNSHRA@0, 0 0 0 0 ENSG00000233421.2 ENST00000415386.2 chr1:16860381-16862144 2 1546 215 intergenic 4.49 0 0,0,0 0 0,0,0 0 0 0 9.64036222509703 0 0 9.91979301423027 0 0 0 0 chimp,horse,human,macaque,marmoset,orangutan, lincRNA processed_transcript A549@0.561508,AG04450@0.620495,BJ@0.709749,GM12878@0.157639,H1HESC@0.611893,HELAS3@1.00353,HEPG2@1.09518,HMEC@0.048137,HSMM@0.255636,HUVEC@0.194007,K562@0.02202,MCF7@0.001299,NHEK@0.244074,NHLF@0.0929995,SKNSHRA@0.0098835, 86 2 50 2 ENSG00000219481.3 ENST00000392963.3 chr1:16888818-16931427 18 4277 38298 intergenic 65.95 0 0,0,1 0 0,1,1 0 0 0 0 0 0 5.63853168108487 0 0 0 1 chimp,human,macaque,orangutan, lincRNA processed_transcript A549@31.8045,AG04450@26.3956,BJ@30.8268,GM12878@1.67234,H1HESC@6.71546,HELAS3@22.7893,HEPG2@21.5556,HMEC@6.22955,HSMM@10.2861,HUVEC@23.6754,K562@15.6015,MCF7@48.3135,NHEK@11.4406,NHLF@18.925,SKNSHRA@36.0579, 0 0 0 0 ENSG00000219481.3 ENST00000401007.3 chr1:16888923-16892211 3 1952 1332 intergenic 1.77 0 0,0,1 0 0,1,1 0 0 0 0 0 0 0 0 0 0 0 chimp,horse,human,macaque,orangutan, lincRNA processed_transcript A549@31.8045,AG04450@26.3956,BJ@30.8268,GM12878@1.67234,H1HESC@6.71546,HELAS3@22.7893,HEPG2@21.5556,HMEC@6.22955,HSMM@10.2861,HUVEC@23.6754,K562@15.6015,MCF7@48.3135,NHEK@11.4406,NHLF@18.925,SKNSHRA@36.0579, 0 0 0 0 ENSG00000219481.3 ENST00000430580.1 chr1:16892131-16940083 19 3057 44859 intergenic 64.25 0 0,1,0 1 0,1,1 0 0 0 0 0 0 4.16094210009814 0.714862123542656 0 0 1 chimp,human,orangutan, lincRNA processed_transcript A549@31.8045,AG04450@26.3956,BJ@30.8268,GM12878@1.67234,H1HESC@6.71546,HELAS3@22.7893,HEPG2@21.5556,HMEC@6.22955,HSMM@10.2861,HUVEC@23.6754,K562@15.6015,MCF7@48.3135,NHEK@11.4406,NHLF@18.925,SKNSHRA@36.0579, 0 0 0 0 ENSG00000219481.3 ENST00000420031.2 chr1:16892935-16901051 6 525 7581 intergenic -2.60 0 0,1,0 0 0,1,1 0 0 0 0 0 0 0 0 0 0 0 chimp,horse,human,macaque,marmoset,orangutan, lincRNA processed_transcript A549@31.8045,AG04450@26.3956,BJ@30.8268,GM12878@1.67234,H1HESC@6.71546,HELAS3@22.7893,HEPG2@21.5556,HMEC@6.22955,HSMM@10.2861,HUVEC@23.6754,K562@15.6015,MCF7@48.3135,NHEK@11.4406,NHLF@18.925,SKNSHRA@36.0579, 0 0 0 0 ENSG00000219481.3 ENST00000432949.1 chr1:16892935-16905862 9 1060 11851 intergenic 40.39 0 0,0,0 0 0,1,1 0 0 0 0 0 0 0 0 0 1 1 chimp,human,macaque,marmoset,orangutan, lincRNA processed_transcript A549@31.8045,AG04450@26.3956,BJ@30.8268,GM12878@1.67234,H1HESC@6.71546,HELAS3@22.7893,HEPG2@21.5556,HMEC@6.22955,HSMM@10.2861,HUVEC@23.6754,K562@15.6015,MCF7@48.3135,NHEK@11.4406,NHLF@18.925,SKNSHRA@36.0579, 83 2 47 2 ENSG00000219481.3 ENST00000287968.8 chr1:16895583-16902975 5 689 6695 intergenic -3.16 0 0,0,1 0 0,1,1 0 0 0 0 0 0 0 0 0 0 0 chimp,horse,human,macaque,marmoset,orangutan, lincRNA processed_transcript A549@31.8045,AG04450@26.3956,BJ@30.8268,GM12878@1.67234,H1HESC@6.71546,HELAS3@22.7893,HEPG2@21.5556,HMEC@6.22955,HSMM@10.2861,HUVEC@23.6754,K562@15.6015,MCF7@48.3135,NHEK@11.4406,NHLF@18.925,SKNSHRA@36.0579, 0 0 0 0 ENSG00000219481.3 ENST00000420513.1 chr1:16920057-16935145 4 484 14598 intergenic 4.76 0 0,0,0 0 0,1,1 0 0 0 0 0 0 0 0 0 1 1 chimp,human,macaque,marmoset,orangutan, lincRNA processed_transcript A549@31.8045,AG04450@26.3956,BJ@30.8268,GM12878@1.67234,H1HESC@6.71546,HELAS3@22.7893,HEPG2@21.5556,HMEC@6.22955,HSMM@10.2861,HUVEC@23.6754,K562@15.6015,MCF7@48.3135,NHEK@11.4406,NHLF@18.925,SKNSHRA@36.0579, 0 0 0 0 ENSG00000219481.3 ENST00000449853.1 chr1:16931913-16940029 3 2740 5372 intergenic 4.76 0 1,1,1 1 0,1,1 0 0 0 0 0 0 0 3.84810126582278 0 1 1 chimp,human,macaque,marmoset,orangutan, lincRNA processed_transcript A549@31.8045,AG04450@26.3956,BJ@30.8268,GM12878@1.67234,H1HESC@6.71546,HELAS3@22.7893,HEPG2@21.5556,HMEC@6.22955,HSMM@10.2861,HUVEC@23.6754,K562@15.6015,MCF7@48.3135,NHEK@11.4406,NHLF@18.925,SKNSHRA@36.0579, 62 2 0 0 ENSG00000215908.4 ENST00000540383.1 chr1:16944751-16957401 7 1758 10880 intergenic 46.64 0 0,0,1 0 0,0,0 0 0 0 219.092150170648 24.9098345588235 114.81 260.810580204778 55.825919117647 126.753 0 0 chimp,elephant,guinea_pig,human,mouse,orangutan,rabbit, lincRNA processed_transcript A549@3.84549,AG04450@2.39355,BJ@4.39399,GM12878@4.25669,H1HESC@6.62496,HELAS3@6.49631,HEPG2@22.7998,HMEC@2.21173,HSMM@2.12921,HUVEC@10.3771,K562@15.51,MCF7@5.03345,NHEK@5.25919,NHLF@2.53612,SKNSHRA@7.94718, 0 0 0 0 ENSG00000215908.4 ENST00000412962.1 chr1:16944757-16961054 8 2755 13528 intergenic 46.64 0 0,0,1 0 0,0,0 0 0 0 180.125952813067 29.3913364872856 0 208.651542649728 55.494234180958 0 0 0 cat,chimp,cow,dog,elephant,guinea_pig,horse,human,macaque,marmoset,panda,pig, lincRNA processed_transcript A549@3.84549,AG04450@2.39355,BJ@4.39399,GM12878@4.25669,H1HESC@6.62496,HELAS3@6.49631,HEPG2@22.7998,HMEC@2.21173,HSMM@2.12921,HUVEC@10.3771,K562@15.51,MCF7@5.03345,NHEK@5.25919,NHLF@2.53612,SKNSHRA@7.94718, 0 0 0 0 ENSG00000245549.1 ENST00000501442.1 chr1:16946910-16951432 2 2864 1656 intergenic 1.81 0 0,0,0 0 0,0,0 0 0 0 47.1487430167598 36.8756038647343 84.452 119.662360335196 88.820652173913 95.387 0 1 chimp,human,marmoset, lincRNA lincRNA A549@0.006998,AG04450@0,BJ@0.007079,GM12878@0.007758,H1HESC@0.003619,HELAS3@0.002913,HEPG2@0.009029,HMEC@0,HSMM@0,HUVEC@0.006522,K562@0.0036295,MCF7@0.0496405,NHEK@0.00409267,NHLF@0,SKNSHRA@0.0034605, 0 0 0 0 ENSG00000215908.4 ENST00000421700.1 chr1:16947340-16971167 11 5923 17884 intergenic 46.64 0 0,1,0 1 0,0,0 0 0 0 118.591085598514 15.7261239096399 82.211 172.519331419888 22.6319056139566 100.338 0 0 chimp,human,macaque,marmoset,orangutan, lincRNA processed_transcript A549@3.84549,AG04450@2.39355,BJ@4.39399,GM12878@4.25669,H1HESC@6.62496,HELAS3@6.49631,HEPG2@22.7998,HMEC@2.21173,HSMM@2.12921,HUVEC@10.3771,K562@15.51,MCF7@5.03345,NHEK@5.25919,NHLF@2.53612,SKNSHRA@7.94718, 0 0 0 0 ENSG00000215908.4 ENST00000362058.2 chr1:16956165-16971178 6 2023 12980 intergenic 21.89 0 0,1,1 1 0,0,0 0 0 0 163.935739001483 16.6501540832049 82.387 174.135936727632 23.2798921417565 100.481 0 0 cat,chimp,cow,dog,elephant,guinea_pig,human,macaque,marmoset,orangutan,panda,pig,rabbit, lincRNA processed_transcript A549@3.84549,AG04450@2.39355,BJ@4.39399,GM12878@4.25669,H1HESC@6.62496,HELAS3@6.49631,HEPG2@22.7998,HMEC@2.21173,HSMM@2.12921,HUVEC@10.3771,K562@15.51,MCF7@5.03345,NHEK@5.25919,NHLF@2.53612,SKNSHRA@7.94718, 0 0 0 0 ENSG00000256048.1 ENST00000535991.1 chr1:16973894-16975897 2 1911 90 intergenic 7.50 0 0,0,0 0 0,0,0 0 0 0 135.254840397698 0 213.693 385.024071166928 145.444444444444 410.314 0 0 cat,chimp,cow,dog,elephant,horse,human,macaque,marmoset,mouse,orangutan,panda,pig,rat, lincRNA lincRNA A549@0.002757,AG04450@0.028971,BJ@0.058923,GM12878@0.0418525,H1HESC@0.055345,HELAS3@0.077029,HEPG2@0.127422,HMEC@0.00214,HSMM@0,HUVEC@0.006196,K562@0.036046,MCF7@0.0380925,NHEK@0.0140657,NHLF@0.0025365,SKNSHRA@0.041068, 0 0 0 0 ENSG00000223643.1 ENST00000414340.1 chr1:17177698-17179294 3 605 987 intergenic 2.31 0 0,0,0 0 0,0,0 0 0 0 0 0 0 0 0 0 0 0 chimp,human,macaque,marmoset,orangutan, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000223643.1 ENST00000422345.1 chr1:17177816-17179624 4 731 1071 intergenic -2.96 0 0,0,0 0 0,0,0 0 0 0 0 0 0 0 0 0 0 0 chimp,human,macaque,marmoset,orangutan, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 22 4 93 2 ENSG00000230239.1 ENST00000414128.1 chr1:17181902-17185779 3 879 2994 intergenic 0.93 0 0,0,1 0 0,0,0 0 0 0 0 3.15130260521042 0 492.928327645051 35.1356045424182 33.459 0 0 cat,chimp,cow,dog,elephant,guinea_pig,horse,human,macaque,marmoset,mouse,opossum,orangutan,panda,rabbit,rat, antisense antisense A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0.004704,HELAS3@0,HEPG2@0.0229545,HMEC@0,HSMM@0,HUVEC@0,K562@0.005265,MCF7@0.0046625,NHEK@0.00149367,NHLF@0,SKNSHRA@0.006099, 0 0 0 0 ENSG00000228549.1 ENST00000438002.1 chr1:17197440-17200574 2 2518 614 exonic 7.33 1 0,0,0 0 0,0,0 0 0 0 0 0 0 0 0 0 0 0 chimp,human,macaque,marmoset,orangutan, antisense antisense A549@0.624605,AG04450@0.505528,BJ@0.438287,GM12878@0.0154585,H1HESC@0.824157,HELAS3@0.0460525,HEPG2@0.094029,HMEC@0.0964,HSMM@0.0952935,HUVEC@0.165105,K562@0.084618,MCF7@0,NHEK@0.308712,NHLF@0.17099,SKNSHRA@0.0207735, 0 0 0 0 ENSG00000228549.1 ENST00000451828.1 chr1:17198753-17200536 2 432 1349 intergenic -4.74 1 0,1,0 0 0,0,0 0 0 0 0 0 0 0 0 0 0 0 chimp,human,macaque,orangutan, antisense antisense A549@0.624605,AG04450@0.505528,BJ@0.438287,GM12878@0.0154585,H1HESC@0.824157,HELAS3@0.0460525,HEPG2@0.094029,HMEC@0.0964,HSMM@0.0952935,HUVEC@0.165105,K562@0.084618,MCF7@0,NHEK@0.308712,NHLF@0.17099,SKNSHRA@0.0207735, 0 0 0 0 ENSG00000228549.1 ENST00000453554.1 chr1:17198779-17200539 2 1544 214 intergenic 5.73 1 0,1,0 0 0,0,0 0 0 0 0 0 0 0 0 0 0 0 chimp,horse,human,macaque,marmoset,orangutan, antisense antisense A549@0.624605,AG04450@0.505528,BJ@0.438287,GM12878@0.0154585,H1HESC@0.824157,HELAS3@0.0460525,HEPG2@0.094029,HMEC@0.0964,HSMM@0.0952935,HUVEC@0.165105,K562@0.084618,MCF7@0,NHEK@0.308712,NHLF@0.17099,SKNSHRA@0.0207735, 86 2 50 2 ENSG00000228549.1 ENST00000457856.1 chr1:17199534-17200587 2 473 578 intergenic -2.95 1 0,0,0 0 0,0,0 0 0 0 0 0 0 0 0 0 0 0 chimp,human,macaque,marmoset,orangutan, antisense antisense A549@0.624605,AG04450@0.505528,BJ@0.438287,GM12878@0.0154585,H1HESC@0.824157,HELAS3@0.0460525,HEPG2@0.094029,HMEC@0.0964,HSMM@0.0952935,HUVEC@0.165105,K562@0.084618,MCF7@0,NHEK@0.308712,NHLF@0.17099,SKNSHRA@0.0207735, 0 0 0 0 ENSG00000238142.1 ENST00000422124.1 chr1:17215033-17215868 2 404 429 intergenic 0.25 1 0,0,1 0 0,0,0 0 0 0 0 0 0 0 0 0 0 0 chimp,human,macaque,marmoset,orangutan, lincRNA lincRNA A549@2.28606,AG04450@0.202082,BJ@0.139581,GM12878@0,H1HESC@0.499792,HELAS3@0,HEPG2@0,HMEC@0.05874,HSMM@0.07554,HUVEC@0.20861,K562@0,MCF7@0,NHEK@0.234665,NHLF@0.171276,SKNSHRA@0, 4 8 1 8 ENSG00000238142.1 ENST00000416869.1 chr1:17215037-17216137 2 334 764 intergenic 0.25 1 1,1,1 1 0,0,0 0 0 0 0 0 0 0 0 0 0 0 chimp,human,macaque,marmoset,orangutan, lincRNA lincRNA A549@2.28606,AG04450@0.202082,BJ@0.139581,GM12878@0,H1HESC@0.499792,HELAS3@0,HEPG2@0,HMEC@0.05874,HSMM@0.07554,HUVEC@0.20861,K562@0,MCF7@0,NHEK@0.234665,NHLF@0.171276,SKNSHRA@0, 0 0 0 0 ENSG00000238142.1 ENST00000457075.1 chr1:17215037-17216144 2 344 761 intergenic 0.25 1 1,1,1 1 0,0,0 0 0 0 0 0 0 0 0 0 0 0 chimp,guinea_pig,human,macaque,marmoset,orangutan, lincRNA lincRNA A549@2.28606,AG04450@0.202082,BJ@0.139581,GM12878@0,H1HESC@0.499792,HELAS3@0,HEPG2@0,HMEC@0.05874,HSMM@0.07554,HUVEC@0.20861,K562@0,MCF7@0,NHEK@0.234665,NHLF@0.171276,SKNSHRA@0, 0 0 0 0 ENSG00000226526.1 ENST00000446261.1 chr1:17305421-17331586 2 634 25529 exonic -6.92 0 0,1,0 0 0,0,0 50.1577287066246 24.9133926123232 0 106.785488958991 45.2444670766579 52.958 114.10094637224 50.3782365153355 40.488 0 0 cat,chimp,cow,dog,elephant,guinea_pig,horse,human,macaque,marmoset,orangutan,panda,pig, antisense antisense A549@0,AG04450@0.043629,BJ@0.0815835,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0.004289,HMEC@0,HSMM@0.12857,HUVEC@0,K562@0,MCF7@0,NHEK@0.006218,NHLF@0.196511,SKNSHRA@0.17434, 0 0 0 0 ENSG00000204362.4 ENST00000412427.1 chr1:17516278-17524112 3 4673 3157 intergenic 3.58 0 1,1,1 0 0,0,0 0 0 0 2.03851915257864 1.52043078872347 0 3.83522362508025 1.54070319923978 0 0 0 chimp,human,macaque,marmoset,orangutan, lincRNA lincRNA A549@0.0247005,AG04450@0.016526,BJ@0.14331,GM12878@0.001386,H1HESC@0.007346,HELAS3@0.070607,HEPG2@0.0166035,HMEC@0.05331,HSMM@0.30071,HUVEC@0,K562@0.000534,MCF7@0.000894,NHEK@0.46383,NHLF@0.0079565,SKNSHRA@0.0025575, 0 0 0 0 ENSG00000204362.4 ENST00000539219.1 chr1:17516278-17524112 4 4596 3232 intergenic 3.58 0 1,1,1 0 0,0,0 0 0 0 2.07267188859878 1.48514851485149 0 3.08202785030461 2.66738861386139 0 1 1 chimp,human,macaque,marmoset,orangutan, lincRNA lincRNA A549@0.0247005,AG04450@0.016526,BJ@0.14331,GM12878@0.001386,H1HESC@0.007346,HELAS3@0.070607,HEPG2@0.0166035,HMEC@0.05331,HSMM@0.30071,HUVEC@0,K562@0.000534,MCF7@0.000894,NHEK@0.46383,NHLF@0.0079565,SKNSHRA@0.0025575, 0 0 0 0 ENSG00000227751.1 ENST00000439577.1 chr1:17733256-17733878 2 309 311 exonic -3.20 0 1,1,1 0 0,0,0 121.47572815534 0 0 211.592233009709 0 3.06 205.197411003236 0 3.108 0 0 cat,chimp,dog,elephant,horse,human,macaque,marmoset,orangutan,panda,pig, antisense antisense A549@0.043377,AG04450@0.007207,BJ@0,GM12878@0,H1HESC@0.015913,HELAS3@0.0085335,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0.0245585,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000236648.1 ENST00000430540.1 chr1:18044182-18076473 4 606 31679 intergenic 0.81 1 0,1,0 0 0,0,0 0 3.19640771488999 16.592 5.72937293729373 7.46882793017457 11.418 5.98349834983498 7.95776381830235 15.792 0 0 cat,chimp,human,macaque,marmoset,orangutan,panda, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0.034214,HEPG2@0.208954,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0.0063265,SKNSHRA@0, 0 0 0 0 ENSG00000230035.1 ENST00000419667.1 chr1:18493423-18505840 4 429 11982 intronic 0.87 0 0,1,0 0 0,0,0 0 11.8272408612919 0 10.3263403263403 17.6946252712402 0 12.8717948717949 19.7461191787682 0 0 0 chimp,human,macaque,marmoset,orangutan, antisense antisense A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0.0287455,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000225387.1 ENST00000420211.1 chr1:18712323-18715008 2 489 2194 intergenic 3.46 0 0,0,1 0 0,0,0 0 0 0 0 0 14.829 0 0 16.467 0 0 chimp,human,macaque,marmoset,orangutan, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0.267437,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000230424.1 ENST00000437898.1 chr1:19536995-19567198 2 505 29696 exonic -6.75 0 1,1,1 1 0,0,0 64.9742574257426 39.9626212284483 131.55 116.483168316832 41.5022561961207 187.61 120.255445544554 50.520474137931 194.965 0 0 cat,chimp,cow,dog,elephant,guinea_pig,horse,human,macaque,marmoset,orangutan,panda,pig,rabbit,rat, antisense antisense A549@0.408175,AG04450@0.846162,BJ@0.777551,GM12878@1.04253,H1HESC@0.120343,HELAS3@1.23632,HEPG2@1.17863,HMEC@0.145371,HSMM@0.457437,HUVEC@0.552549,K562@0.72666,MCF7@0.28411,NHEK@0.112371,NHLF@0.321351,SKNSHRA@1.69066, 0 0 0 0 ENSG00000235185.1 ENST00000416470.1 chr1:19918296-19923326 2 205 4823 intergenic 0 1 0,1,0 0 0,0,0 0 0 29.484 33.5512195121951 7.5177275554634 71.614 51.7121951219512 16.2915198009538 71.545 0 0 cat,chimp,cow,dog,horse,human,macaque,marmoset,orangutan,panda, antisense antisense A549@0.0133435,AG04450@0,BJ@0,GM12878@0.022567,H1HESC@0.024378,HELAS3@0,HEPG2@0.0131775,HMEC@0,HSMM@0,HUVEC@0.0506525,K562@0,MCF7@0.0487305,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000235434.1 ENST00000454736.1 chr1:20140860-20145995 2 445 4688 exonic 10.28 1 0,0,0 0 0,0,0 65.9101123595506 19.7570392491468 11.565 30.038202247191 31.2559726962457 17.701 38.9730337078652 33.4545648464164 15.664 0 0 cat,chimp,dog,guinea_pig,horse,human,orangutan,panda, antisense antisense A549@0,AG04450@0,BJ@0,GM12878@0.0090195,H1HESC@0.004641,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000227066.1 ENST00000417884.1 chr1:20480831-20487061 2 1081 5147 intergenic 5.66 1 0,0,0 0 0,0,0 0 0 0 0 0 0 0 0 7.888 0 0 chimp,human,macaque,orangutan, antisense antisense A549@0.0126935,AG04450@0,BJ@0,GM12878@0.004251,H1HESC@0.0019155,HELAS3@0.019271,HEPG2@0.022669,HMEC@0,HSMM@0.0008255,HUVEC@0,K562@0,MCF7@0.0114105,NHEK@0.002395,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000227066.1 ENST00000431027.1 chr1:20484185-20487059 2 2491 381 intergenic 5.66 1 0,0,0 0 0,0,0 0 0 0 0 0 0 0 0 0 0 0 chimp,human,macaque,orangutan, antisense antisense A549@0.0126935,AG04450@0,BJ@0,GM12878@0.004251,H1HESC@0.0019155,HELAS3@0.019271,HEPG2@0.022669,HMEC@0,HSMM@0.0008255,HUVEC@0,K562@0,MCF7@0.0114105,NHEK@0.002395,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000225986.1 ENST00000442226.1 chr1:20510735-20512979 2 508 1734 intronic -1.08 0 1,1,1 1 0,0,0 81.7677165354331 0 22.227 114.326771653543 19.9636678200692 66.244 114.043307086614 19.9971164936563 76.317 0 0 chimp,elephant,horse,human,macaque,marmoset,orangutan,panda,pig,rabbit, antisense antisense A549@0,AG04450@0,BJ@0,GM12878@0.120838,H1HESC@0.0649805,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@1.54928,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000228105.1 ENST00000435552.1 chr1:20569588-20571148 2 478 1080 intergenic 3.92 1 0,0,0 0 0,0,0 0 0 0 0 1.65277777777778 10.56 0 1.6787037037037 12.646 0 0 chimp,guinea_pig,human,macaque,marmoset,orangutan, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000226664.1 ENST00000444923.1 chr1:20620704-20649680 2 227 28747 intronic -0.16 0 0,1,0 0 0,0,0 0 10.3666469544648 50.515 0 15.6244129822242 77.401 4.28193832599119 16.4372630187498 94.732 0 0 chimp,cow,human,macaque,marmoset, antisense antisense A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0.008985,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000236963.1 ENST00000426428.1 chr1:20687072-20755275 12 2981 65200 intergenic 10.56 1 0,0,0 0 0,0,0 0 14.826226993865 54.672 30.3616236162362 14.7856134969325 0 33.5528346192553 16.2200153374233 5.346 0 0 chimp,human,macaque,marmoset, lincRNA lincRNA A549@0,AG04450@0.000749,BJ@0,GM12878@0,H1HESC@0.0095525,HELAS3@0,HEPG2@0.0082,HMEC@0.002736,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0.004374,NHLF@0.004916,SKNSHRA@0.0028955, 0 0 0 0 ENSG00000236963.1 ENST00000418743.1 chr1:20724598-20755232 5 780 29846 intergenic -7.19 0 0,0,0 0 0,0,0 0 21.5088454064196 54.672 3.67051282051282 15.6591167995711 0 4.20512820512821 18.6886684982912 5.346 0 0 chimp,dog,human,macaque,orangutan,panda, lincRNA lincRNA A549@0,AG04450@0.000749,BJ@0,GM12878@0,H1HESC@0.0095525,HELAS3@0,HEPG2@0.0082,HMEC@0.002736,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0.004374,NHLF@0.004916,SKNSHRA@0.0028955, 0 0 0 0 ENSG00000236963.1 ENST00000423486.1 chr1:20725209-20757727 5 349 32161 intergenic 0 0 0,1,0 0 0,0,0 70.7191977077364 22.4818258138739 65.816 98.243553008596 15.7334038120705 43.987 114.919770773639 18.4841578309132 43.59 0 0 cat,chimp,human,macaque,marmoset,orangutan,panda,pig, lincRNA lincRNA A549@0,AG04450@0.000749,BJ@0,GM12878@0,H1HESC@0.0095525,HELAS3@0,HEPG2@0.0082,HMEC@0.002736,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0.004374,NHLF@0.004916,SKNSHRA@0.0028955, 0 0 0 0 ENSG00000226487.1 ENST00000421114.1 chr1:20738797-20739746 3 373 572 intergenic 2.24 0 0,0,0 0 0,0,0 0 0 22.848 4.48525469168901 0 51.967 4.56032171581769 0 52.464 0 0 NA lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000233069.1 ENST00000436642.1 chr1:21059373-21060445 2 297 773 intergenic 0.35 0 0,0,1 0 0,0,0 0 0 0 0 0 27.254 0 222.597671410091 31.449 0 0 human,macaque,marmoset,panda,pig, antisense antisense A549@0,AG04450@0.0206855,BJ@0.011966,GM12878@0,H1HESC@0,HELAS3@0.01396,HEPG2@0.02183,HMEC@0.013694,HSMM@0,HUVEC@0,K562@0,MCF7@0.0068765,NHEK@0.00441533,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000203394.2 ENST00000413451.1 chr1:21069480-21070455 2 570 403 exonic -6.77 0 0,0,0 0 0,0,0 286.508771929825 23.4739454094293 198.99 281 41.6923076923077 175.655 291.79649122807 49.8089330024814 210.419 0 0 cat,chimp,cow,dog,elephant,guinea_pig,horse,human,macaque,marmoset,mouse,orangutan,panda,pig,platypus,rabbit, antisense antisense A549@0.137296,AG04450@0.0976855,BJ@0.0213005,GM12878@0.141787,H1HESC@0,HELAS3@0.105829,HEPG2@0.0263895,HMEC@0,HSMM@0,HUVEC@0,K562@0.126004,MCF7@0.0035945,NHEK@0.0405527,NHLF@0.0033735,SKNSHRA@0.112603, 0 0 0 0 ENSG00000236936.1 ENST00000416959.1 chr1:21592575-21593744 3 720 445 intronic 6.22 0 0,0,1 0 0,0,0 0 0 0 0 9.59550561797753 11.041 0 9.84719101123595 11.688 0 0 chimp,human,macaque,marmoset,orangutan, antisense antisense A549@0.136769,AG04450@0.0031,BJ@0.0133885,GM12878@0,H1HESC@0,HELAS3@0.150919,HEPG2@0.0119125,HMEC@0.011327,HSMM@0.134547,HUVEC@0.031423,K562@0.105605,MCF7@0,NHEK@0.00911367,NHLF@0.0161325,SKNSHRA@0, 0 0 0 0 ENSG00000231105.1 ENST00000449034.1 chr1:21619783-21626267 3 2476 4004 exonic 0.01 0 0,0,0 0 0,0,0 4.83037156704362 0 0 7.63852988691438 6.47477522477523 1.434 7.87520193861066 7.06218781218781 3.386 0 0 elephant,human,macaque,orangutan, antisense antisense A549@0.279907,AG04450@0.0105255,BJ@0.0587225,GM12878@0.506379,H1HESC@0.151734,HELAS3@0.0183235,HEPG2@0.0473345,HMEC@0.051203,HSMM@0.006437,HUVEC@0.185159,K562@0.0018735,MCF7@0.006488,NHEK@0.037037,NHLF@0.129522,SKNSHRA@0.603853, 0 0 0 0 ENSG00000236009.1 ENST00000444647.1 chr1:21742391-21743985 3 604 986 intergenic 2.47 0 0,0,0 0 0,0,0 0 0 0 0 0 0 0 0 0 0 0 chimp,human,macaque,marmoset,orangutan, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0.0088915, 22 4 0 0 ENSG00000236009.1 ENST00000423921.1 chr1:21742815-21743867 3 602 446 intergenic 2.47 0 0,0,0 0 0,0,0 0 0 0 0 0 0 0 0 0 0 0 chimp,human,macaque,marmoset,orangutan, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0.0088915, 0 0 0 0 ENSG00000233431.1 ENST00000457706.1 chr1:21912965-21917680 2 819 3894 intergenic 5.81 0 0,0,0 0 0,0,0 0 42.814072932717 0 3.02808302808303 37.035439137134 18.283 3.06471306471306 33.4732922444787 18.553 0 0 chimp,cow,human,macaque,marmoset,orangutan, antisense antisense A549@0,AG04450@0,BJ@0.0039415,GM12878@0,H1HESC@0.105501,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0.075449,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000228397.1 ENST00000455966.1 chr1:22350487-22351461 2 613 359 intergenic -1.21 1 0,1,1 0 0,0,0 0 0 0 0 0 9.002 0 0 9.054 0 0 chimp,dog,elephant,human,macaque,marmoset,orangutan,panda,rabbit, lincRNA lincRNA A549@0.0747325,AG04450@0.116535,BJ@0.0635405,GM12878@0.69837,H1HESC@0.179137,HELAS3@0.09293,HEPG2@0.119684,HMEC@0.03329,HSMM@0.0523505,HUVEC@0.34671,K562@0.165756,MCF7@0.0332835,NHEK@0.0754813,NHLF@0.188428,SKNSHRA@0.150178, 0 0 0 0 ENSG00000218510.3 ENST00000434233.1 chr1:22351681-22357396 2 807 4906 intergenic 5.64 0 0,1,1 1 0,0,0 0 3.402975947819 0 14.3519206939281 3.98695474928659 0 18.3878562577447 4.06848756624541 0 0 0 cat,chimp,cow,dog,elephant,guinea_pig,horse,human,macaque,marmoset,orangutan,panda,pig,rat, lincRNA lincRNA A549@10.2876,AG04450@6.20196,BJ@9.47547,GM12878@4.61003,H1HESC@8.6654,HELAS3@11.3197,HEPG2@6.45807,HMEC@2.25021,HSMM@3.3354,HUVEC@4.08523,K562@7.57,MCF7@4.31387,NHEK@2.98055,NHLF@3.50453,SKNSHRA@8.23414, 0 0 0 0 ENSG00000218510.3 ENST00000420503.1 chr1:22352004-22357293 3 768 4517 intergenic 5.64 0 0,1,0 1 0,0,0 0 3.6960371928271 0 13.40234375 2.78901926057118 3.732 17.4791666666667 2.87314589329201 3.732 0 0 cat,chimp,dog,elephant,human,macaque,marmoset,orangutan,panda,rabbit, lincRNA lincRNA A549@10.2876,AG04450@6.20196,BJ@9.47547,GM12878@4.61003,H1HESC@8.6654,HELAS3@11.3197,HEPG2@6.45807,HMEC@2.25021,HSMM@3.3354,HUVEC@4.08523,K562@7.57,MCF7@4.31387,NHEK@2.98055,NHLF@3.50453,SKNSHRA@8.23414, 0 0 0 0 ENSG00000218510.3 ENST00000404210.2 chr1:22352027-22357713 4 1041 4639 intergenic 4.92 1 1,1,1 1 0,0,0 25.6061479346782 3.59883595602501 0 13.0854947166186 2.71567148092261 6.962 16.2449567723343 2.79758568657038 6.982 0 0 cat,chimp,cow,dog,elephant,guinea_pig,horse,human,macaque,marmoset,mouse,orangutan,panda, lincRNA lincRNA A549@10.2876,AG04450@6.20196,BJ@9.47547,GM12878@4.61003,H1HESC@8.6654,HELAS3@11.3197,HEPG2@6.45807,HMEC@2.25021,HSMM@3.3354,HUVEC@4.08523,K562@7.57,MCF7@4.31387,NHEK@2.98055,NHLF@3.50453,SKNSHRA@8.23414, 0 0 0 0 ENSG00000218510.3 ENST00000416769.1 chr1:22352027-22357716 2 1052 4635 intergenic 5.64 1 1,1,1 1 0,0,0 25.3384030418251 3.60194174757282 0 12.9486692015209 2.71801510248112 6.962 16.0750950570342 2.8 6.982 0 0 cat,chimp,cow,dog,elephant,horse,human,macaque,marmoset,orangutan,panda, lincRNA lincRNA A549@10.2876,AG04450@6.20196,BJ@9.47547,GM12878@4.61003,H1HESC@8.6654,HELAS3@11.3197,HEPG2@6.45807,HMEC@2.25021,HSMM@3.3354,HUVEC@4.08523,K562@7.57,MCF7@4.31387,NHEK@2.98055,NHLF@3.50453,SKNSHRA@8.23414, 0 0 0 0 ENSG00000218510.3 ENST00000452322.1 chr1:22354832-22357105 2 372 1899 intergenic -2.14 0 0,1,0 0 0,0,0 0 0 0 19.2123655913978 3.06161137440758 1.984 22.1290322580645 3.1563981042654 2.072 0 0 cat,chimp,cow,dog,elephant,horse,human,macaque,marmoset,mouse,orangutan,panda, lincRNA lincRNA A549@10.2876,AG04450@6.20196,BJ@9.47547,GM12878@4.61003,H1HESC@8.6654,HELAS3@11.3197,HEPG2@6.45807,HMEC@2.25021,HSMM@3.3354,HUVEC@4.08523,K562@7.57,MCF7@4.31387,NHEK@2.98055,NHLF@3.50453,SKNSHRA@8.23414, 0 0 0 0 ENSG00000230068.1 ENST00000431803.1 chr1:22385690-22390692 2 688 4312 intronic -8.27 0 0,0,1 0 0,0,0 0 0 8.36 0 2.59508348794063 4.613 0 4.38497217068646 4.833 0 0 chimp,dog,guinea_pig,horse,human,macaque,marmoset,orangutan, sense_intronic sense_intronic A549@0.0465925,AG04450@0.091918,BJ@0.057537,GM12878@0.291774,H1HESC@0.0282355,HELAS3@0.153333,HEPG2@0.095181,HMEC@0.029994,HSMM@0.0287565,HUVEC@0.18588,K562@0.6599,MCF7@0.077688,NHEK@0.145422,NHLF@0.0175105,SKNSHRA@0.146645, 0 0 0 0 ENSG00000237200.1 ENST00000438551.1 chr1:22843967-22846201 2 271 1961 intronic 0 0 0,0,0 0 0,0,0 0 51.0331463539011 0 0 6.30596634370219 80.383 0 7.90872004079551 100.4 0 0 chimp,dog,guinea_pig,horse,human,macaque,marmoset,orangutan, sense_intronic sense_intronic A549@0.096492,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0.040367,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0.072087, 0 0 0 0 ENSG00000225952.1 ENST00000419644.1 chr1:23162206-23163342 2 478 656 intronic 4.20 0 0,0,0 0 0,0,0 80.7907949790795 82.8125 11.5 148.855648535565 110.967987804878 26.002 146.100418410042 108.38262195122 25.943 0 0 cat,chimp,cow,dog,elephant,guinea_pig,horse,human,macaque,marmoset,mouse,orangutan,panda,rabbit, antisense antisense A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000227868.1 ENST00000440767.1 chr1:23337327-23340538 2 528 2681 intergenic 7.22 1 0,0,1 0 0,0,1 19.5833333333333 0 0 139.765151515152 1.4278254382693 16.545 145.901515151515 3.80007459903021 15.366 0 0 cat,cow,dog,elephant,guinea_pig,horse,human,macaque,mouse,orangutan,panda,pig,rabbit, antisense antisense A549@0.016382,AG04450@0.030461,BJ@0.009132,GM12878@0.036708,H1HESC@0.081463,HELAS3@0.073964,HEPG2@0.004105,HMEC@0.015451,HSMM@0.0038825,HUVEC@0,K562@0.0272095,MCF7@0.030691,NHEK@0.05769,NHLF@0.014644,SKNSHRA@0.117754, 0 0 0 0 ENSG00000235052.1 ENST00000451217.1 chr1:23875630-23877406 2 454 1320 intergenic -2.58 0 0,0,1 0 0,0,0 0 0 0 6.1784140969163 0 0 6.42070484581498 0 0 0 0 chimp,cow,dog,human,orangutan,panda, lincRNA lincRNA A549@1.16818,AG04450@0.058276,BJ@0.053622,GM12878@0.391705,H1HESC@0.321825,HELAS3@3.46865,HEPG2@0.278079,HMEC@0.035918,HSMM@0.0090245,HUVEC@0.122162,K562@0.250877,MCF7@0.285772,NHEK@0.0589633,NHLF@0.0085105,SKNSHRA@0.126746, 0 0 0 0 ENSG00000247296.1 ENST00000499591.1 chr1:23940283-23945957 2 1727 3945 intergenic 4.10 0 0,0,1 0 0,0,0 0 2.72623574144487 135.66 0.69195136074117 3.10038022813688 140.482 0.726693688477128 6.28314321926489 140.607 0 0 chimp,guinea_pig,horse,human,macaque,marmoset,orangutan, lincRNA lincRNA A549@0.027058,AG04450@0.00373,BJ@0,GM12878@0.104528,H1HESC@0.578397,HELAS3@0.024103,HEPG2@0.0031555,HMEC@0,HSMM@0,HUVEC@0,K562@0.007882,MCF7@0.0904115,NHEK@0,NHLF@0,SKNSHRA@0.0013145, 0 0 0 0 ENSG00000236810.1 ENST00000427796.1 chr1:24086872-24104777 4 1070 16829 exonic -10.76 0 0,1,0 1 0,0,0 0 9.43763741161091 101.91 12.3663551401869 8.42830827737833 155.335 21.0242990654206 9.09857983243211 146.883 0 0 cat,chimp,cow,dog,human,macaque,marmoset,orangutan,panda, antisense antisense A549@0.824087,AG04450@0.883876,BJ@1.15188,GM12878@1.75711,H1HESC@1.44217,HELAS3@5.64817,HEPG2@3.62348,HMEC@0.718249,HSMM@0.552196,HUVEC@0.846248,K562@6.57232,MCF7@0.578621,NHEK@1.52637,NHLF@0.645502,SKNSHRA@2.17335, 0 0 0 0 ENSG00000236810.1 ENST00000447961.1 chr1:24098101-24098887 3 456 326 intergenic 0 0 0,1,1 0 0,0,0 0 0 0 7.54385964912281 0 0 7.73684210526316 0 0 0 0 chimp,guinea_pig,human,macaque,marmoset,orangutan, antisense antisense A549@0.824087,AG04450@0.883876,BJ@1.15188,GM12878@1.75711,H1HESC@1.44217,HELAS3@5.64817,HEPG2@3.62348,HMEC@0.718249,HSMM@0.552196,HUVEC@0.846248,K562@6.57232,MCF7@0.578621,NHEK@1.52637,NHLF@0.645502,SKNSHRA@2.17335, 0 0 0 0 ENSG00000232557.1 ENST00000411815.1 chr1:24233601-24234375 2 208 564 intronic 0 0 0,0,0 0 0,0,0 0 0 0 0 0 12.143 0 0 14.571 0 0 NA sense_intronic sense_intronic A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000225315.1 ENST00000439239.1 chr1:24367343-24413289 4 433 45507 exonic 4.20 0 0,0,1 0 0,0,0 2.51270207852194 12.5779989891665 0 86.4965357967668 22.4403937855715 0 94.9422632794457 23.1672270200189 0 0 0 chimp,elephant,horse,human,macaque,marmoset,mouse,orangutan,panda, antisense antisense A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0.0191035,HEPG2@0.0549565,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000230703.1 ENST00000429191.1 chr1:24393264-24410055 3 458 16329 intronic 0 0 0,0,0 0 0,0,0 0 20.5403882662747 0 0 33.8829689509462 27.465 0 36.0167187212934 27.516 0 0 chimp,human,macaque,marmoset,orangutan, antisense antisense A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000230023.1 ENST00000439059.1 chr1:24526730-24538183 3 1847 9602 intergenic 1.20 0 1,1,1 0 0,0,0 0 11.4340762341179 0 3.58960476448295 13.6215371797542 8.257 8.32160259880888 14.441262237034 8.234 0 0 chimp,human,macaque,marmoset, lincRNA processed_transcript A549@0.034768,AG04450@0.0130875,BJ@0,GM12878@0.0021795,H1HESC@0.0022425,HELAS3@0,HEPG2@0.01627,HMEC@0.008853,HSMM@0.056627,HUVEC@0.0026285,K562@0,MCF7@0.002223,NHEK@0.0181223,NHLF@0.005215,SKNSHRA@0.0012265, 0 0 0 0 ENSG00000232298.1 ENST00000446220.1 chr1:24620477-24648420 3 2334 25605 intronic 2.20 0 0,1,0 0 0,0,0 6.99657240788346 33.7262644014841 86.784 26.4605826906598 25.2091388400703 120.388 32.4027420736932 25.8117555165007 118.148 0 0 cat,chimp,human,macaque,orangutan,panda, antisense antisense A549@0.0026565,AG04450@0.005293,BJ@0,GM12878@0,H1HESC@0,HELAS3@0.012916,HEPG2@0.0035015,HMEC@0,HSMM@0,HUVEC@0.008973,K562@0,MCF7@0.0023485,NHEK@0.0227253,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000232298.1 ENST00000437965.1 chr1:24634046-24648391 5 851 13486 intronic 1.50 0 0,1,0 0 0,0,0 23.1198589894242 53.6140441939789 86.784 19.213866039953 89.5948390923921 121.822 18.3960047003525 43.5849770131989 118.148 0 0 chimp,elephant,human,macaque,marmoset,orangutan, antisense antisense A549@0.0026565,AG04450@0.005293,BJ@0,GM12878@0,H1HESC@0,HELAS3@0.012916,HEPG2@0.0035015,HMEC@0,HSMM@0,HUVEC@0.008973,K562@0,MCF7@0.0023485,NHEK@0.0227253,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000231779.1 ENST00000445805.1 chr1:24863138-24865371 2 418 1813 exonic 0 0 0,0,0 0 0,0,0 0 4.94760066188638 0 0 1.43463872035301 0 0 1.46442360728075 0 0 0 chimp,cow,horse,human,macaque,marmoset,orangutan,pig, lincRNA processed_transcript A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0.05963,HEPG2@0.063521,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0.00548933,NHLF@0,SKNSHRA@0.0264835, 0 0 0 0 ENSG00000229162.1 ENST00000456316.1 chr1:25287836-25289588 3 817 931 intronic 1.00 0 0,0,0 0 0,0,0 13.9473684210526 18.2169709989259 0 19.4173806609547 46.0988184747583 0 16.156670746634 46.234156820623 0 0 0 chimp,human,macaque,orangutan, antisense antisense A549@0.0060155,AG04450@0,BJ@0,GM12878@0.641244,H1HESC@0.00253,HELAS3@0,HEPG2@0,HMEC@0.009987,HSMM@0,HUVEC@0,K562@0.0089855,MCF7@0,NHEK@0.0412977,NHLF@0,SKNSHRA@0.008315, 0 0 0 0 ENSG00000233755.1 ENST00000424084.1 chr1:25370198-25439610 3 487 68921 intergenic -1.36 0 0,0,0 0 0,0,0 0 16.8784260239985 12.76 0 22.365258774539 23.744 0 22.4506899203436 26.787 0 0 chimp,human,macaque,marmoset,orangutan, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0.0047715,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000233755.1 ENST00000429666.1 chr1:25436949-25439611 2 612 2048 intergenic 3.19 0 0,0,1 0 0,0,0 0 24.71923828125 12.76 0 26.70263671875 23.744 0 23.0927734375 26.787 0 0 chimp,human,macaque,orangutan, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0.0047715,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000231953.1 ENST00000455902.1 chr1:25534630-25535360 2 418 310 intergenic 0 0 0,0,1 0 0,0,0 0 0 0 0 0 0 0 0 0 0 0 NA antisense antisense A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0.031082,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000227985.1 ENST00000450820.1 chr1:25579798-25594376 2 775 13801 intergenic -8.69 0 0,0,1 0 0,0,0 0 0 0 0 0.571480327512499 0 0 1.58075501775234 2.916 0 0 chimp,human,macaque,marmoset,orangutan, processed_transcript processed_transcript A549@0.03144,AG04450@0.370885,BJ@0.372449,GM12878@0.458391,H1HESC@0.323812,HELAS3@0.233891,HEPG2@0.22319,HMEC@0.064732,HSMM@0.110332,HUVEC@0.327862,K562@0.47476,MCF7@0.281836,NHEK@0.109746,NHLF@0.072768,SKNSHRA@0.555578, 0 0 0 0 ENSG00000225643.1 ENST00000412797.1 chr1:25907969-25916847 2 481 8395 intergenic 2.35 0 0,0,1 0 0,0,0 0 0 0 0 2.26825491363907 0 0 2.32352590827874 0 0 0 chimp,dog,elephant,guinea_pig,horse,human,macaque,marmoset,orangutan,panda,pig,rabbit, lincRNA lincRNA A549@0.098043,AG04450@0.0361675,BJ@0.0700605,GM12878@0.052912,H1HESC@0.0123055,HELAS3@0.054114,HEPG2@0.0313455,HMEC@0,HSMM@0.05158,HUVEC@0.0603215,K562@0.181646,MCF7@0.0296095,NHEK@0,NHLF@0.020154,SKNSHRA@0.302401, 0 0 0 0 ENSG00000233478.1 ENST00000436991.1 chr1:25971035-25985602 2 2222 12343 intronic 7.02 0 0,0,0 0 0,0,0 0 24.5535931297091 0 0 35.4536174349834 1.673 0 36.7247022603905 1.757 0 0 chimp,cow,human,macaque,marmoset,orangutan,pig, antisense antisense A549@0,AG04450@0,BJ@0,GM12878@0.001054,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000236528.1 ENST00000455431.1 chr1:26186104-26189911 2 847 2958 exonic 6.15 0 0,1,1 1 0,0,0 183.144037780401 0 7.48 247.977567886659 12.8265720081136 51.09 284.88665879575 13.3779580797836 59.828 0 0 cat,chimp,cow,dog,elephant,guinea_pig,horse,human,macaque,marmoset,mouse,orangutan,panda,pig,rabbit,rat, antisense antisense A549@0.185692,AG04450@0.063348,BJ@0.067779,GM12878@0.153913,H1HESC@0.159875,HELAS3@0.250736,HEPG2@0.245775,HMEC@0.053052,HSMM@0.023642,HUVEC@0.15921,K562@0.601164,MCF7@0.270854,NHEK@0.0215003,NHLF@0.0228805,SKNSHRA@0.166732, 0 0 0 0 ENSG00000236782.1 ENST00000407889.2 chr1:26496438-26498156 4 690 1022 exonic 14.26 0 0,1,1 0 0,0,0 133.691304347826 101.957925636008 59.148 299.260869565217 140.423679060665 552.142 288.38115942029 140.639921722114 49.142 0 0 cat,chimp,cow,dog,elephant,horse,human,macaque,marmoset,mouse,orangutan,panda,rabbit,rat, antisense antisense A549@0.007545,AG04450@0,BJ@0,GM12878@0,H1HESC@0.0035655,HELAS3@0.0402,HEPG2@0,HMEC@0.006572,HSMM@0,HUVEC@0.003903,K562@0.012322,MCF7@0,NHEK@0.02178,NHLF@0,SKNSHRA@0.0119095, 0 0 0 0 ENSG00000236782.1 ENST00000414762.1 chr1:26496671-26497304 2 445 186 exonic 0 0 1,1,1 0 0,0,0 84.3595505617977 127.822580645161 98.846 147.483146067416 200.403225806452 127.353 156.995505617978 208.483870967742 118.364 0 0 cat,chimp,cow,dog,elephant,guinea_pig,horse,human,macaque,marmoset,orangutan,panda,rabbit,rat, antisense antisense A549@0.007545,AG04450@0,BJ@0,GM12878@0,H1HESC@0.0035655,HELAS3@0.0402,HEPG2@0,HMEC@0.006572,HSMM@0,HUVEC@0.003903,K562@0.012322,MCF7@0,NHEK@0.02178,NHLF@0,SKNSHRA@0.0119095, 0 0 0 0 ENSG00000236782.1 ENST00000433939.1 chr1:26496671-26498229 3 718 836 exonic 14.26 0 0,1,1 0 0,0,0 100.00278551532 96.2033492822966 59.148 231.338440111421 127.078947368421 62.142 223.344011142061 125.545454545455 49.142 0 0 cat,chimp,cow,dog,elephant,guinea_pig,horse,human,macaque,marmoset,mouse,orangutan,panda,rabbit,rat, antisense antisense A549@0.007545,AG04450@0,BJ@0,GM12878@0,H1HESC@0.0035655,HELAS3@0.0402,HEPG2@0,HMEC@0.006572,HSMM@0,HUVEC@0.003903,K562@0.012322,MCF7@0,NHEK@0.02178,NHLF@0,SKNSHRA@0.0119095, 0 0 0 0 ENSG00000236782.1 ENST00000444682.1 chr1:26496685-26497864 2 621 556 exonic 11.68 0 0,0,1 0 0,0,0 111.070853462158 49.3794964028777 114.946 239.202898550725 97.4388489208633 135.554 229.035426731079 102.888489208633 118.066 0 0 chimp,cow,dog,elephant,guinea_pig,horse,human,macaque,marmoset,mouse,orangutan,panda,rabbit,rat, antisense antisense A549@0.007545,AG04450@0,BJ@0,GM12878@0,H1HESC@0.0035655,HELAS3@0.0402,HEPG2@0,HMEC@0.006572,HSMM@0,HUVEC@0.003903,K562@0.012322,MCF7@0,NHEK@0.02178,NHLF@0,SKNSHRA@0.0119095, 0 0 0 0 ENSG00000236782.1 ENST00000448923.1 chr1:26496983-26498312 3 489 836 exonic 14.26 0 0,1,0 0 0,0,0 117.468302658487 96.2033492822966 49.104 261.167689161554 127.078947368421 58.712 246.503067484663 125.545454545455 45.622 0 0 cat,chimp,cow,dog,elephant,guinea_pig,horse,human,macaque,marmoset,mouse,orangutan,panda,rabbit,rat, antisense antisense A549@0.007545,AG04450@0,BJ@0,GM12878@0,H1HESC@0.0035655,HELAS3@0.0402,HEPG2@0,HMEC@0.006572,HSMM@0,HUVEC@0.003903,K562@0.012322,MCF7@0,NHEK@0.02178,NHLF@0,SKNSHRA@0.0119095, 0 0 0 0 ENSG00000225375.1 ENST00000457019.1 chr1:26575392-26580855 2 578 4883 intronic -7.51 0 0,0,0 0 0,0,0 0 0 0 7.56920415224914 1.26848249027237 0 8.39792387543253 1.31578947368421 0 0 0 chimp,horse,human,macaque,marmoset,orangutan, antisense antisense A549@0.034502,AG04450@0.00998,BJ@0.0078535,GM12878@0.0804975,H1HESC@0.0799775,HELAS3@0.0454805,HEPG2@0.051226,HMEC@0,HSMM@0,HUVEC@0.0035005,K562@0.888656,MCF7@0.04536,NHEK@0.0355147,NHLF@0,SKNSHRA@0.032331, 0 0 0 0 ENSG00000225891.1 ENST00000423060.1 chr1:26789247-26793773 4 525 3995 intronic -1.20 0 0,0,0 0 0,0,0 0 4.35043804755945 27.23 12.2971428571429 5.27309136420526 16.502 12.7695238095238 6.2575719649562 17.124 0 0 chimp,dog,human,macaque,marmoset,orangutan, antisense antisense A549@0.210946,AG04450@0.102715,BJ@0.114213,GM12878@0.480998,H1HESC@0.11095,HELAS3@0.295478,HEPG2@0.170933,HMEC@0.00774,HSMM@0,HUVEC@0.187626,K562@0.382177,MCF7@0.15096,NHEK@0,NHLF@0.01459,SKNSHRA@0.425177, 0 0 0 0 ENSG00000226698.1 ENST00000448791.1 chr1:27202624-27204736 2 304 1806 intergenic -5.08 0 0,1,1 0 0,0,0 0 14.624584717608 0 12.1973684210526 29.0902547065338 2.7 12.3552631578947 28.3516057585825 2.78 0 0 chimp,human,marmoset,orangutan, antisense antisense A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000224311.1 ENST00000425205.1 chr1:27555597-27560843 3 376 4866 intergenic 0 0 0,0,0 0 0,0,0 46.3723404255319 0 205.132 46.2340425531915 1.53904644471845 415.53 39.5744680851064 3.55240443896424 304.665 0 0 chimp,human,macaque,marmoset,orangutan, antisense antisense A549@0,AG04450@0.007811,BJ@0,GM12878@0.0070065,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000240397.1 ENST00000474826.1 chr1:27633257-27634278 2 416 603 exonic -5.12 0 0,1,0 0 0,0,0 398.319711538462 559.26368159204 384.798 222.853365384615 244.321724709784 228.099 214.961538461538 175.862354892206 215.827 0 0 cat,chimp,dog,elephant,horse,human,macaque,marmoset,orangutan,panda,pig, antisense antisense A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0.013925,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000241169.1 ENST00000492975.1 chr1:27783709-27786093 2 426 1956 intronic -6.40 0 0,1,1 0 0,0,0 0 0 0 0 4.6221881390593 0 0 4.84406952965235 2.43 0 0 chimp,human,marmoset,orangutan, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000237429.1 ENST00000443579.1 chr1:27852316-27857072 2 281 4473 intergenic -3.90 0 1,1,1 1 0,0,0 0 118.460764587525 84.75 0 120.27207690588 144.729 0 125.942320590208 142.022 0 0 chimp,dog,human,marmoset,orangutan, antisense antisense A549@0.0348605,AG04450@0.0753895,BJ@0.05752,GM12878@0.328908,H1HESC@0.22105,HELAS3@0.245903,HEPG2@0.238208,HMEC@0.072343,HSMM@0.139499,HUVEC@0,K562@3.17501,MCF7@0.029061,NHEK@0.040895,NHLF@0.0887885,SKNSHRA@0.008031, 0 0 0 0 ENSG00000233975.1 ENST00000440492.1 chr1:27986839-27989233 2 439 1953 intergenic -0.92 1 0,1,1 0 0,0,0 0 9.47465437788019 0 59.6651480637813 286.266769073221 49.519 70.4145785876993 303.750128008193 49.428 0 0 chimp,human,macaque,marmoset,orangutan, lincRNA lincRNA A549@0.009844,AG04450@0,BJ@0.038507,GM12878@0.082867,H1HESC@0.005611,HELAS3@0.0053,HEPG2@0.0247415,HMEC@0,HSMM@0.056356,HUVEC@0,K562@0.018213,MCF7@0,NHEK@0.10907,NHLF@0,SKNSHRA@0.020597, 0 0 0 0 ENSG00000225886.1 ENST00000430683.1 chr1:27995979-27996787 2 487 319 intronic -6.08 0 0,0,0 0 0,0,0 0 0 21.148 0 0 13.504 0 0 13.408 0 0 chimp,human,macaque,marmoset,orangutan, antisense antisense A549@0,AG04450@0,BJ@0,GM12878@0.327164,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000227050.1 ENST00000448015.1 chr1:28265386-28286704 5 486 20824 exonic 10.50 0 0,1,0 0 0,0,0 0 1.34191317710334 10.78 118.141975308642 14.2319439108721 48.926 151.109053497942 18.6326834421821 62.211 0 0 chimp,cow,elephant,human,macaque,marmoset,panda,pig, antisense antisense A549@0.0056255,AG04450@0,BJ@0,GM12878@0.009514,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0.004729,MCF7@0.0081895,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000237895.1 ENST00000450821.1 chr1:28356225-28357423 2 505 691 intronic -5.15 0 0,0,0 0 0,0,0 0 0 0 0 0 1.53 0 24.3371924746744 1.813 0 0 chimp,dog,guinea_pig,human,macaque,marmoset,orangutan, sense_intronic sense_intronic A549@0.007155,AG04450@0.0266095,BJ@0.019851,GM12878@0.249817,H1HESC@0.054737,HELAS3@0.097801,HEPG2@0.0438615,HMEC@0.004096,HSMM@0.008593,HUVEC@0.019878,K562@0.235342,MCF7@0.0721185,NHEK@0.060979,NHLF@0.0181745,SKNSHRA@0.0435245, 0 0 0 0 ENSG00000245178.1 ENST00000499627.1 chr1:28835514-28837109 2 1559 34 exonic -5.57 0 0,0,1 0 0,0,0 0 0 0 0 0 0 116.050673508659 602 0 0 1 human,macaque,orangutan, lincRNA lincRNA A549@0.0146285,AG04450@0.0041315,BJ@0.005696,GM12878@0.0095435,H1HESC@0.019792,HELAS3@0.0699895,HEPG2@0.0060295,HMEC@0.005246,HSMM@0,HUVEC@0.025006,K562@0.029749,MCF7@0.0418375,NHEK@0.00163567,NHLF@0,SKNSHRA@0.006475, 0 0 0 0 ENSG00000197989.8 ENST00000464612.1 chr1:28905050-28907522 4 715 1751 exonic 0.65 1 0,0,1 1 0,1,0 53.4545454545455 39.0388349514563 16.8 70.4 62.6036550542547 21.426 226.255944055944 64.6173615077099 24.64 0 0 cat,chimp,cow,horse,human,macaque,marmoset,orangutan,panda, lincRNA processed_transcript A549@10.3409,AG04450@4.58487,BJ@5.15934,GM12878@23.8802,H1HESC@13.953,HELAS3@23.4471,HEPG2@18.8582,HMEC@9.35388,HSMM@3.5427,HUVEC@9.3399,K562@39.1473,MCF7@14.7014,NHEK@12.7513,NHLF@6.349,SKNSHRA@4.50359, 0 0 0 0 ENSG00000197989.8 ENST00000475441.1 chr1:28905050-28907741 5 439 2244 exonic 0.98 1 1,1,1 0 0,1,0 0 55.1680035650624 0 0 79.5200534759358 3.51 50.7380410022779 78.8480392156863 6.631 1 1 chimp,human,macaque,marmoset,orangutan, lincRNA processed_transcript A549@10.3409,AG04450@4.58487,BJ@5.15934,GM12878@23.8802,H1HESC@13.953,HELAS3@23.4471,HEPG2@18.8582,HMEC@9.35388,HSMM@3.5427,HUVEC@9.3399,K562@39.1473,MCF7@14.7014,NHEK@12.7513,NHLF@6.349,SKNSHRA@4.50359, 0 0 0 0 ENSG00000197989.8 ENST00000531126.1 chr1:28905050-28908346 6 713 2573 exonic 6.44 1 1,1,1 1 0,1,0 0 48.1138748542557 0 0 69.3521181500194 3.51 31.2398316970547 68.7660318694131 6.631 1 1 chimp,human,macaque,marmoset,orangutan, lincRNA processed_transcript A549@10.3409,AG04450@4.58487,BJ@5.15934,GM12878@23.8802,H1HESC@13.953,HELAS3@23.4471,HEPG2@18.8582,HMEC@9.35388,HSMM@3.5427,HUVEC@9.3399,K562@39.1473,MCF7@14.7014,NHEK@12.7513,NHLF@6.349,SKNSHRA@4.50359, 0 0 0 0 ENSG00000197989.8 ENST00000461448.1 chr1:28905050-28908354 4 1625 1673 exonic 6.44 1 1,1,1 1 0,1,0 28.8424615384615 45.982068141064 0 44.3009230769231 63.6306037059175 3.51 48.8744615384615 58.4417214584579 6.631 1 1 chimp,human,macaque,marmoset,orangutan, lincRNA processed_transcript A549@10.3409,AG04450@4.58487,BJ@5.15934,GM12878@23.8802,H1HESC@13.953,HELAS3@23.4471,HEPG2@18.8582,HMEC@9.35388,HSMM@3.5427,HUVEC@9.3399,K562@39.1473,MCF7@14.7014,NHEK@12.7513,NHLF@6.349,SKNSHRA@4.50359, 0 0 0 0 ENSG00000197989.8 ENST00000470977.1 chr1:28905050-28908384 5 1093 2233 exonic 6.44 1 1,1,1 1 0,1,0 10.0585544373285 50.5163457232423 0 24.4419030192132 67.9480519480519 3.51 50.1363220494053 64.6708463949843 6.631 0 0 chimp,horse,human,macaque,marmoset,orangutan, lincRNA processed_transcript A549@10.3409,AG04450@4.58487,BJ@5.15934,GM12878@23.8802,H1HESC@13.953,HELAS3@23.4471,HEPG2@18.8582,HMEC@9.35388,HSMM@3.5427,HUVEC@9.3399,K562@39.1473,MCF7@14.7014,NHEK@12.7513,NHLF@6.349,SKNSHRA@4.50359, 0 0 0 0 ENSG00000197989.8 ENST00000474814.1 chr1:28905051-28908383 3 1900 1428 intergenic 6.44 1 1,1,1 1 0,1,0 34.9652631578947 40.1701680672269 0 50.2836842105263 58.0560224089636 3.51 229.402105263158 56.4565826330532 6.631 0 0 cat,chimp,horse,human,macaque,marmoset,orangutan, lincRNA processed_transcript A549@10.3409,AG04450@4.58487,BJ@5.15934,GM12878@23.8802,H1HESC@13.953,HELAS3@23.4471,HEPG2@18.8582,HMEC@9.35388,HSMM@3.5427,HUVEC@9.3399,K562@39.1473,MCF7@14.7014,NHEK@12.7513,NHLF@6.349,SKNSHRA@4.50359, 0 0 0 0 ENSG00000197989.8 ENST00000481368.1 chr1:28905052-28908175 4 1584 1533 intergenic 0.65 1 1,1,1 0 0,1,0 57.6483585858586 21.1885192433138 0 72.0315656565656 41.9732550554468 3.51 69.8775252525253 43.3842139595564 6.631 0 0 chimp,human,macaque,marmoset,orangutan,panda, lincRNA processed_transcript A549@10.3409,AG04450@4.58487,BJ@5.15934,GM12878@23.8802,H1HESC@13.953,HELAS3@23.4471,HEPG2@18.8582,HMEC@9.35388,HSMM@3.5427,HUVEC@9.3399,K562@39.1473,MCF7@14.7014,NHEK@12.7513,NHLF@6.349,SKNSHRA@4.50359, 0 0 0 0 ENSG00000197989.8 ENST00000481220.1 chr1:28905053-28908365 5 746 2558 intergenic 6.44 1 1,1,1 1 0,1,0 32.701072386059 38.7470680218921 0 43.9195710455764 56.8569194683346 3.51 124.943699731903 56.2259577795152 6.631 0 0 chimp,horse,human,macaque,marmoset,orangutan, lincRNA processed_transcript A549@10.3409,AG04450@4.58487,BJ@5.15934,GM12878@23.8802,H1HESC@13.953,HELAS3@23.4471,HEPG2@18.8582,HMEC@9.35388,HSMM@3.5427,HUVEC@9.3399,K562@39.1473,MCF7@14.7014,NHEK@12.7513,NHLF@6.349,SKNSHRA@4.50359, 0 0 0 0 ENSG00000197989.8 ENST00000488745.1 chr1:28905053-28909495 6 1359 3073 intergenic 0.98 1 0,0,1 0 0,1,0 0 40.2853888708103 0 0 59.2102180279857 0 16.3899926416483 59.7351122681419 0 0 1 chimp,human,orangutan, lincRNA processed_transcript A549@10.3409,AG04450@4.58487,BJ@5.15934,GM12878@23.8802,H1HESC@13.953,HELAS3@23.4471,HEPG2@18.8582,HMEC@9.35388,HSMM@3.5427,HUVEC@9.3399,K562@39.1473,MCF7@14.7014,NHEK@12.7513,NHLF@6.349,SKNSHRA@4.50359, 0 0 0 0 ENSG00000197989.8 ENST00000483436.1 chr1:28905058-28908330 6 676 2586 intergenic 6.44 1 1,1,1 1 0,1,0 0 47.8720030935808 0 0 69.0034802784223 3.51 32.9497041420118 68.4203402938902 6.631 1 1 chimp,human,macaque,marmoset,orangutan, lincRNA processed_transcript A549@10.3409,AG04450@4.58487,BJ@5.15934,GM12878@23.8802,H1HESC@13.953,HELAS3@23.4471,HEPG2@18.8582,HMEC@9.35388,HSMM@3.5427,HUVEC@9.3399,K562@39.1473,MCF7@14.7014,NHEK@12.7513,NHLF@6.349,SKNSHRA@4.50359, 0 0 0 0 ENSG00000197989.8 ENST00000464115.1 chr1:28906847-28908365 3 709 805 intergenic 6.44 0 0,1,0 1 0,1,0 50.5994358251058 68.8695652173913 0 63.8561354019746 85.495652173913 3.51 66.1438645980254 79.2422360248447 6.631 0 0 chimp,elephant,human,macaque,marmoset,orangutan, lincRNA processed_transcript A549@10.3409,AG04450@4.58487,BJ@5.15934,GM12878@23.8802,H1HESC@13.953,HELAS3@23.4471,HEPG2@18.8582,HMEC@9.35388,HSMM@3.5427,HUVEC@9.3399,K562@39.1473,MCF7@14.7014,NHEK@12.7513,NHLF@6.349,SKNSHRA@4.50359, 0 0 0 0 ENSG00000197989.8 ENST00000461832.1 chr1:28906871-28908369 3 672 822 intergenic 6.44 0 1,1,1 1 0,1,0 53.3854166666667 67.4452554744526 0 67.3720238095238 83.7274939172749 3.51 69.7857142857143 77.6034063260341 6.631 0 0 chimp,elephant,horse,human,macaque,marmoset,orangutan, lincRNA processed_transcript A549@10.3409,AG04450@4.58487,BJ@5.15934,GM12878@23.8802,H1HESC@13.953,HELAS3@23.4471,HEPG2@18.8582,HMEC@9.35388,HSMM@3.5427,HUVEC@9.3399,K562@39.1473,MCF7@14.7014,NHEK@12.7513,NHLF@6.349,SKNSHRA@4.50359, 0 0 0 0 ENSG00000229388.1 ENST00000420776.1 chr1:28969740-28975042 2 622 4678 intergenic -2.32 1 1,1,1 1 0,0,0 0 0 262.496 31.7379421221865 1.3253527148354 302.909 34.6607717041801 1.4162035057717 252 0 0 chimp,cow,elephant,human,orangutan,panda,rabbit, lincRNA lincRNA A549@0.253745,AG04450@0.027006,BJ@0.110645,GM12878@0.488709,H1HESC@0.121287,HELAS3@0.404743,HEPG2@0.355193,HMEC@0.078743,HSMM@0.313225,HUVEC@0.210296,K562@0.383941,MCF7@0.57086,NHEK@0.106239,NHLF@0.07793,SKNSHRA@0.337148, 0 0 0 0 ENSG00000229388.1 ENST00000427804.1 chr1:28972603-28975093 2 686 1802 intergenic -0.96 1 0,0,1 0 0,0,0 0 0 0 13.6632653061224 3.44062153163152 0 18.4241982507289 3.67647058823529 0 0 0 chimp,human,marmoset,orangutan, lincRNA lincRNA A549@0.253745,AG04450@0.027006,BJ@0.110645,GM12878@0.488709,H1HESC@0.121287,HELAS3@0.404743,HEPG2@0.355193,HMEC@0.078743,HSMM@0.313225,HUVEC@0.210296,K562@0.383941,MCF7@0.57086,NHEK@0.106239,NHLF@0.07793,SKNSHRA@0.337148, 0 0 0 0 ENSG00000226852.1 ENST00000443593.1 chr1:29194087-29197779 2 1744 1946 intergenic 10.76 0 0,0,1 0 0,0,0 31.8096330275229 0 73.359 45.7551605504587 0 48.517 49.0407110091743 0 48.52 0 0 chimp,cow,dog,horse,human,macaque,marmoset,orangutan,panda, lincRNA lincRNA A549@0.0019315,AG04450@0.0025675,BJ@0,GM12878@0,H1HESC@0.679512,HELAS3@0.0023905,HEPG2@0.0085675,HMEC@0,HSMM@0.23512,HUVEC@0.0122355,K562@0.01218,MCF7@0.12413,NHEK@0.001509,NHLF@0,SKNSHRA@0.396428, 0 0 0 0 ENSG00000233427.1 ENST00000418471.1 chr1:29196995-29203848 3 1082 5767 intergenic 4.89 0 0,0,0 0 0,0,0 0 0 0 4.28373382624769 0.93809606381134 3.6 4.28373382624769 0.967227327900121 3.648 0 0 chimp,dog,horse,human,macaque,marmoset,orangutan, antisense antisense A549@0.0178545,AG04450@0.0193255,BJ@0.0547075,GM12878@0.0172135,H1HESC@0.075865,HELAS3@0.110425,HEPG2@0.259109,HMEC@0.018869,HSMM@0,HUVEC@0.179998,K562@0.0929965,MCF7@0,NHEK@0.0145743,NHLF@0.005335,SKNSHRA@0.074973, 0 0 0 0 ENSG00000225750.1 ENST00000413004.1 chr1:29471006-29473506 3 276 2220 intergenic 0 0 0,1,1 0 0,0,0 0 0 188.308 0 0 209.478 0 0 206.712 0 0 chimp,human,macaque,marmoset,orangutan, lincRNA lincRNA A549@0.0488,AG04450@0.100231,BJ@0.0476205,GM12878@0.354465,H1HESC@0.084331,HELAS3@0.0452915,HEPG2@0.037129,HMEC@0,HSMM@0,HUVEC@0.112524,K562@0.694225,MCF7@0.061832,NHEK@0.103374,NHLF@0,SKNSHRA@0.108004, 0 0 0 0 ENSG00000227637.1 ENST00000450108.1 chr1:29479001-29479503 2 318 182 intronic 0 0 0,0,0 0 0,0,0 0 0 0 0 0 0 0 0 0 0 0 NA antisense antisense A549@0,AG04450@0,BJ@0,GM12878@0.01465,H1HESC@0,HELAS3@0.014122,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000237934.1 ENST00000427046.1 chr1:29550445-29551328 3 570 309 intronic -1.12 1 0,0,0 0 0,0,0 0 0 90.68 7.94385964912281 0 94.361 8.11228070175439 0 69.22 0 0 cat,chimp,elephant,horse,human,macaque,marmoset,orangutan,panda,pig,rabbit, antisense antisense A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0.0145695,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0.0093205,K562@0,MCF7@0.12247,NHEK@0,NHLF@0,SKNSHRA@0.019412, 0 0 0 0 ENSG00000230523.1 ENST00000417651.1 chr1:29656132-29676626 3 2145 18345 intergenic 4.13 1 0,1,0 0 0,0,0 0 14.2589806486781 0 0 8.29713818479149 46.338 0.793006993006993 9.66197874080131 40.277 0 0 chimp,guinea_pig,horse,human,macaque,marmoset,orangutan,panda, lincRNA processed_transcript A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0.0090955,HELAS3@0,HEPG2@0.0053215,HMEC@0,HSMM@0,HUVEC@0,K562@0.0088375,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000228176.1 ENST00000422638.1 chr1:30181698-30182394 2 496 198 intergenic 0.14 1 0,1,0 0 0,0,0 39.9012096774194 0 32.23 53.7318548387097 9.65656565656566 45.926 56.0483870967742 9.81818181818182 43.264 0 0 cat,chimp,cow,dog,elephant,guinea_pig,horse,human,macaque,marmoset,orangutan,panda, lincRNA lincRNA A549@0.139163,AG04450@0.049398,BJ@0.0626015,GM12878@0,H1HESC@0.017532,HELAS3@0.027422,HEPG2@0.124444,HMEC@0.016444,HSMM@0,HUVEC@0.0635575,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0.223373, 0 0 0 0 ENSG00000233399.1 ENST00000445180.1 chr1:30486799-30510459 7 2512 21136 intergenic 4.89 1 0,0,1 0 0,0,0 0 1.20694549583649 0 0.859872611464968 0.925056775170326 0 0.885350318471338 1.29650832702498 0 0 0 chimp,human,orangutan, lincRNA lincRNA A549@0,AG04450@0.0117525,BJ@0,GM12878@0,H1HESC@0.001647,HELAS3@0,HEPG2@0,HMEC@0.118328,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0.004271, 0 0 0 0 ENSG00000233372.1 ENST00000441046.1 chr1:30613110-30614454 2 549 793 intergenic -3.97 1 0,1,1 0 0,0,0 0 0 0 0 0 2.232 0 0 2.259 0 0 chimp,human,macaque,marmoset, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0.01783,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000236335.1 ENST00000427319.1 chr1:30882407-30884485 3 504 1570 intergenic -0.05 0 0,1,1 0 0,0,0 0 0 27.825 0 0 7.778 0 0 12.794 0 0 cat,chimp,cow,dog,horse,human,macaque,marmoset,orangutan,pig, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000231949.1 ENST00000420354.1 chr1:30888672-30893955 3 478 4801 intergenic -0.08 1 0,0,0 0 0,0,0 0 7.32347427619246 0 0 6.06956883982504 0 0 6.67694230368673 2.673 0 0 cat,chimp,dog,horse,human,macaque,marmoset,orangutan,panda,pig, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000186056.4 ENST00000414532.1 chr1:31190940-31199591 5 4276 4367 exonic 18.17 1 0,0,1 0 0,0,0 40.6181010289991 24.4346233111976 0 68.9614125350795 25.4492786810167 0 71.294901777362 26.5204946187314 0 0 0 chimp,human,macaque,marmoset,orangutan, antisense antisense A549@1.01932,AG04450@0.637712,BJ@2.07061,GM12878@1.03037,H1HESC@0.0530375,HELAS3@2.47521,HEPG2@0.625798,HMEC@0.903536,HSMM@0.174985,HUVEC@1.79783,K562@7.10591,MCF7@0.831817,NHEK@0.424566,NHLF@0.053506,SKNSHRA@1.69238, 0 0 0 0 ENSG00000186056.4 ENST00000454613.1 chr1:31191619-31199674 4 2127 5922 exonic 21.53 1 1,1,1 1 0,0,0 72.9680300893277 18.0185748058088 18.06 124.789844851904 19.0493076663289 27.132 129.730606488011 19.8439716312057 26.586 0 0 chimp,elephant,human,macaque,marmoset,orangutan, antisense antisense A549@1.01932,AG04450@0.637712,BJ@2.07061,GM12878@1.03037,H1HESC@0.0530375,HELAS3@2.47521,HEPG2@0.625798,HMEC@0.903536,HSMM@0.174985,HUVEC@1.79783,K562@7.10591,MCF7@0.831817,NHEK@0.424566,NHLF@0.053506,SKNSHRA@1.69238, 0 0 0 0 ENSG00000186056.4 ENST00000414763.1 chr1:31191629-31194570 2 885 2054 exonic 18.17 0 0,1,1 1 0,0,0 170.988700564972 0 22.26 269.41581920904 0.814508276533593 33.592 277.558192090395 0.828140214216164 32.916 0 0 cat,chimp,cow,dog,elephant,guinea_pig,horse,human,macaque,marmoset,orangutan,panda,pig,rabbit, antisense antisense A549@1.01932,AG04450@0.637712,BJ@2.07061,GM12878@1.03037,H1HESC@0.0530375,HELAS3@2.47521,HEPG2@0.625798,HMEC@0.903536,HSMM@0.174985,HUVEC@1.79783,K562@7.10591,MCF7@0.831817,NHEK@0.424566,NHLF@0.053506,SKNSHRA@1.69238, 0 0 0 0 ENSG00000186056.4 ENST00000443076.1 chr1:31198567-31199211 2 452 190 intergenic 10.83 0 0,0,1 0 0,0,0 0 0 53.917 46.4048672566372 37.4473684210526 22.944 54.1814159292035 31.0473684210526 23.501 0 0 chimp,dog,horse,human,macaque,marmoset,orangutan,panda,rabbit, antisense antisense A549@1.01932,AG04450@0.637712,BJ@2.07061,GM12878@1.03037,H1HESC@0.0530375,HELAS3@2.47521,HEPG2@0.625798,HMEC@0.903536,HSMM@0.174985,HUVEC@1.79783,K562@7.10591,MCF7@0.831817,NHEK@0.424566,NHLF@0.053506,SKNSHRA@1.69238, 0 0 0 0 ENSG00000229607.1 ENST00000440358.1 chr1:31283225-31288400 2 442 4731 intergenic -3.10 0 0,0,1 0 0,0,0 0.945701357466063 13.4003381948848 101.852 0 18.5981822024942 96.381 0 18.8099767491017 94.89 0 0 chimp,dog,guinea_pig,horse,human,macaque,marmoset,orangutan,panda, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0.005573,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0.027169,NHEK@0,NHLF@0,SKNSHRA@0.005119, 0 0 0 0 ENSG00000223382.1 ENST00000430320.1 chr1:31297075-31306693 4 666 8946 intergenic -1.78 1 0,0,0 0 0,0,0 6.1006006006006 3.97764363961547 8.604 15.3873873873874 4.20020120724346 23.812 15.0720720720721 4.50525374469036 23.662 0 0 chimp,dog,horse,human,macaque,marmoset,orangutan, lincRNA lincRNA A549@0.0981245,AG04450@0.487364,BJ@0.054931,GM12878@0,H1HESC@0.0061925,HELAS3@0.030468,HEPG2@0,HMEC@0.006111,HSMM@0.192124,HUVEC@0.015329,K562@0.0073315,MCF7@0.216425,NHEK@0.013663,NHLF@0.104387,SKNSHRA@0.285329, 0 0 0 0 ENSG00000223382.1 ENST00000438790.1 chr1:31297522-31306580 3 443 8611 intergenic -5.10 1 0,0,0 0 0,0,0 29.0744920993228 2.60991754732319 12.906 0 2.33515271164789 50.342 0 2.65311810474974 49.879 0 0 chimp,horse,human,macaque,marmoset,orangutan, lincRNA lincRNA A549@0.0981245,AG04450@0.487364,BJ@0.054931,GM12878@0,H1HESC@0.0061925,HELAS3@0.030468,HEPG2@0,HMEC@0.006111,HSMM@0.192124,HUVEC@0.015329,K562@0.0073315,MCF7@0.216425,NHEK@0.013663,NHLF@0.104387,SKNSHRA@0.285329, 0 0 0 0 ENSG00000235143.1 ENST00000431202.1 chr1:31331005-31333101 2 1745 349 intergenic 1.61 1 0,0,0 0 0,0,0 0 0 0 12.8005730659026 0 3.962 13.8011461318052 0 3.976 0 0 chimp,human,macaque,orangutan, antisense antisense A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0.05222,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000229044.1 ENST00000430143.1 chr1:31805914-31819646 3 436 13292 exonic 5.22 0 0,1,1 0 0,0,0 157.786697247706 10.3585615407764 0 203.733944954128 9.80100812518808 67.098 197.169724770642 11.1308305747818 64.166 0 0 cat,chimp,cow,dog,guinea_pig,horse,human,macaque,marmoset,mouse,opossum,orangutan,panda,rabbit,rat, antisense antisense A549@0.031546,AG04450@0.052351,BJ@0.038874,GM12878@0.013776,H1HESC@0,HELAS3@0.025912,HEPG2@0.009912,HMEC@0,HSMM@0,HUVEC@0,K562@0.017092,MCF7@0,NHEK@0.016419,NHLF@0.0043955,SKNSHRA@0.020691, 0 0 0 0 ENSG00000228682.2 ENST00000418618.1 chr1:31971841-31974167 3 1163 1159 intergenic 39.07 1 1,1,1 0 0,0,0 0 0 0 14.816852966466 0.947368421052632 0.61 70.2889079965606 1.49870578084556 0.778 0 0 chimp,human,orangutan, lincRNA lincRNA A549@0.004738,AG04450@0,BJ@0,GM12878@19.6007,H1HESC@0.036945,HELAS3@0.128875,HEPG2@0.165858,HMEC@0,HSMM@0.010588,HUVEC@0.0051045,K562@0.0126405,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0.0038985, 0 0 0 0 ENSG00000223907.1 ENST00000412068.1 chr1:31984036-31989846 3 2738 3068 intergenic 4.78 0 0,0,0 0 0,0,0 0 0 0 0 0 0 0 1.96349413298566 0 0 0 chimp,human,macaque, lincRNA lincRNA A549@0,AG04450@0.0011765,BJ@0,GM12878@4.8134,H1HESC@0.0118015,HELAS3@0.0111605,HEPG2@0.0462075,HMEC@0,HSMM@0.0007505,HUVEC@0,K562@0.003907,MCF7@0,NHEK@0.002265,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000223907.1 ENST00000417514.1 chr1:31987964-31989190 2 1120 104 intergenic 1.71 0 0,0,0 0 0,0,0 0 0 0 0 0 0 0 0 0 0 0 chimp,horse,human,macaque, lincRNA lincRNA A549@0,AG04450@0.0011765,BJ@0,GM12878@4.8134,H1HESC@0.0118015,HELAS3@0.0111605,HEPG2@0.0462075,HMEC@0,HSMM@0.0007505,HUVEC@0,K562@0.003907,MCF7@0,NHEK@0.002265,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000229167.1 ENST00000435872.1 chr1:32037186-32041174 3 588 3396 intergenic 2.65 0 0,1,1 0 0,0,0 0 0 25.048 13.280612244898 10.551531213192 60.294 31.6343537414966 12.7891637220259 66.392 0 0 chimp,cow,elephant,horse,human,macaque,marmoset,orangutan, antisense antisense A549@0.0978735,AG04450@0.0200365,BJ@0.010951,GM12878@0,H1HESC@0.018283,HELAS3@1.39345,HEPG2@3.456,HMEC@0.256347,HSMM@0,HUVEC@0.933502,K562@0.034744,MCF7@0.0172405,NHEK@0.404927,NHLF@0.042443,SKNSHRA@0.060407, 0 0 0 0 ENSG00000235790.1 ENST00000445166.1 chr1:32121710-32125539 2 360 3467 intronic -10.13 0 0,0,0 0 0,0,0 0 21.0807614652437 66.704 5.51111111111111 32.3919815402365 85.8 5.75555555555556 32.7776175367753 76.807 0 0 cat,chimp,dog,horse,human,macaque,marmoset,orangutan,panda,pig, antisense antisense A549@0,AG04450@0.008178,BJ@0.0089395,GM12878@0,H1HESC@0.0218095,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000254545.1 ENST00000527035.1 chr1:32254731-32256923 2 535 1655 exonic -2.27 0 0,0,1 0 0,0,0 76.9551401869159 11.2749244712991 64.496 111.620560747664 29.5317220543807 121.005 130.345794392523 33.0060422960725 120.318 0 0 cat,chimp,cow,dog,elephant,horse,human,macaque,marmoset,orangutan,panda,pig,rabbit,rat, antisense antisense A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0.004225, 0 0 0 0 ENSG00000203620.2 ENST00000453837.1 chr1:32307620-32321169 2 2255 11292 intergenic 2.25 0 0,0,1 0 0,0,0 21.419955654102 3.11609989373007 0 1.24390243902439 11.9673219978746 5.497 1.29268292682927 14.8744243712363 5.957 0 0 chimp,human,macaque,marmoset,orangutan, lincRNA lincRNA A549@0.004895,AG04450@0.004174,BJ@0,GM12878@0.0017865,H1HESC@0,HELAS3@0.007042,HEPG2@0.0072515,HMEC@0,HSMM@0.0018235,HUVEC@0.003232,K562@0.0023725,MCF7@0.0054255,NHEK@0.00113133,NHLF@0,SKNSHRA@0.004021, 0 0 0 0 ENSG00000228634.1 ENST00000447478.1 chr1:32398621-32399576 2 515 438 intronic -6.61 0 0,1,0 0 0,0,0 0 0 131.67 0 0 158.521 0 0 160.3 0 0 chimp,human,macaque,marmoset,orangutan, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0.037247,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0.004491,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000203325.3 ENST00000366152.3 chr1:32517892-32539075 3 621 20558 intronic 5.34 0 0,1,0 0 0,0,0 0 13.6692771670396 60.705 0 19.335295262185 34.475 0 20.4399260628466 34.739 0 0 chimp,human,macaque,marmoset, antisense antisense A549@0.005405,AG04450@0.003592,BJ@0,GM12878@0.0032305,H1HESC@0,HELAS3@0.0079985,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0.016453,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 2 44 0 0 ENSG00000224066.1 ENST00000373604.4 chr1:32670370-32671786 2 640 774 exonic 0.62 0 0,1,1 0 0,0,0 68.6875 1.18863049095607 46.456 99.403125 17.4509043927649 81.673 86.3109375 17.156330749354 77.682 0 0 cat,chimp,cow,elephant,horse,human,macaque,mouse,orangutan, antisense antisense A549@0.16716,AG04450@0.234501,BJ@0.385192,GM12878@0.153793,H1HESC@0.179897,HELAS3@0.332015,HEPG2@0.253218,HMEC@0.106319,HSMM@0.148967,HUVEC@0.379991,K562@0.050444,MCF7@0.082771,NHEK@0.18636,NHLF@0.252938,SKNSHRA@0.631698, 0 0 0 0 ENSG00000224066.1 ENST00000421616.1 chr1:32671099-32672415 4 782 528 exonic 4.40 0 0,0,1 0 0,0,0 29.997442455243 0 39.319 87.5997442455243 0 63.993 74.0115089514067 0 66.383 0 0 cat,chimp,dog,elephant,horse,human,macaque,marmoset,orangutan,pig,rabbit, antisense antisense A549@0.16716,AG04450@0.234501,BJ@0.385192,GM12878@0.153793,H1HESC@0.179897,HELAS3@0.332015,HEPG2@0.253218,HMEC@0.106319,HSMM@0.148967,HUVEC@0.379991,K562@0.050444,MCF7@0.082771,NHEK@0.18636,NHLF@0.252938,SKNSHRA@0.631698, 0 0 0 0 ENSG00000235359.1 ENST00000458147.1 chr1:32786799-32788162 2 761 600 intronic -4.30 0 0,0,0 0 0,0,0 10.1314060446781 8.13833333333333 24.905 15.9789750328515 9.68333333333333 35.987 17 9.61333333333333 38.634 0 0 chimp,cow,dog,elephant,guinea_pig,horse,human,macaque,marmoset,panda,rabbit, antisense antisense A549@0.0056895,AG04450@0,BJ@0.018757,GM12878@0,H1HESC@0.028404,HELAS3@0,HEPG2@0.046079,HMEC@0,HSMM@0,HUVEC@0.0035,K562@0.0284515,MCF7@0.0211995,NHEK@0,NHLF@0,SKNSHRA@0.0029735, 0 0 0 0 ENSG00000233775.1 ENST00000448134.1 chr1:32814795-32816264 2 685 782 intergenic -6.60 0 0,0,0 0 0,0,0 99.2262773722628 0 0 50.6948905109489 0 5.769 51.5094890510949 0 11.411 0 0 cat,chimp,cow,elephant,horse,human,macaque,marmoset,orangutan,panda,pig,rabbit, antisense antisense A549@0.0180735,AG04450@0.020237,BJ@0.0773575,GM12878@0.115481,H1HESC@0.0277505,HELAS3@0.129746,HEPG2@0.584214,HMEC@0,HSMM@0,HUVEC@0.0101745,K562@0.215939,MCF7@0.0352505,NHEK@0,NHLF@0,SKNSHRA@0.0787565, 0 0 0 0 ENSG00000231176.1 ENST00000413329.1 chr1:32816855-32818023 3 657 507 intergenic -0.31 0 0,0,0 0 0,0,0 113.348554033486 8.77909270216963 0 68.2237442922374 0 3.468 127.587519025875 1.18343195266272 2.89 0 0 cat,chimp,cow,dog,elephant,horse,human,macaque,orangutan,panda,pig,rabbit, antisense antisense A549@0,AG04450@0.0077705,BJ@0.0086335,GM12878@0,H1HESC@0,HELAS3@0.0074445,HEPG2@0.0184635,HMEC@0,HSMM@0,HUVEC@0.0052955,K562@0.0124155,MCF7@0,NHEK@0,NHLF@0.0073515,SKNSHRA@0.0224225, 0 0 0 0 ENSG00000224021.1 ENST00000421153.1 chr1:32817122-32819143 3 264 1753 intergenic 0 0 0,1,0 0 0,0,0 0 45.342840844267 0 0 24.4215630347975 5.769 0 29.7872219053052 11.411 0 0 NA antisense antisense A549@0,AG04450@0.0105095,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0.0242725,HMEC@0,HSMM@0,HUVEC@0,K562@0.024326,MCF7@0,NHEK@0.00493367,NHLF@0,SKNSHRA@0.029674, 0 0 0 0 ENSG00000225828.1 ENST00000432622.1 chr1:32826871-32827844 3 696 273 exonic 33.11 0 1,1,1 0 0,0,1 182.701149425287 48.3296703296703 165.61 498.727011494253 102.410256410256 275.275 505.028735632184 104.996336996337 282.881 0 0 chimp,cow,dog,elephant,horse,human,macaque,marmoset,mouse,opossum,orangutan,pig,platypus,rabbit,rat, lincRNA processed_transcript A549@2.26858,AG04450@1.16534,BJ@1.3058,GM12878@1.96832,H1HESC@3.09884,HELAS3@3.56316,HEPG2@8.90585,HMEC@0.323533,HSMM@1.24528,HUVEC@4.39081,K562@6.21815,MCF7@1.74967,NHEK@0.779064,NHLF@0.256506,SKNSHRA@5.06065, 0 0 0 0 ENSG00000225828.1 ENST00000416512.1 chr1:32826872-32829824 2 2757 193 exonic 32.74 0 0,1,1 0 0,0,1 261.70837867247 8.860103626943 140.119 365.209285455205 48.3316062176166 202.082 351.707653246282 52.9481865284974 206.57 0 0 chimp,cow,elephant,horse,human,macaque,marmoset,orangutan,panda,rabbit, lincRNA processed_transcript A549@2.26858,AG04450@1.16534,BJ@1.3058,GM12878@1.96832,H1HESC@3.09884,HELAS3@3.56316,HEPG2@8.90585,HMEC@0.323533,HSMM@1.24528,HUVEC@4.39081,K562@6.21815,MCF7@1.74967,NHEK@0.779064,NHLF@0.256506,SKNSHRA@5.06065, 0 0 0 0 ENSG00000225828.1 ENST00000428500.1 chr1:32826899-32827425 2 360 164 intergenic 1.61 0 1,1,1 0 0,0,1 271.811111111111 4.82926829268293 184.672 586.772222222222 52.0731707317073 365.674 594.513888888889 52.2439024390244 373.732 0 0 chimp,cow,dog,elephant,horse,human,macaque,marmoset,mouse,opossum,orangutan,panda,pig,platypus,rabbit,rat, lincRNA processed_transcript A549@2.26858,AG04450@1.16534,BJ@1.3058,GM12878@1.96832,H1HESC@3.09884,HELAS3@3.56316,HEPG2@8.90585,HMEC@0.323533,HSMM@1.24528,HUVEC@4.39081,K562@6.21815,MCF7@1.74967,NHEK@0.779064,NHLF@0.256506,SKNSHRA@5.06065, 0 0 0 0 ENSG00000225828.1 ENST00000415596.1 chr1:32827330-32829879 3 443 2102 exonic 7.08 0 0,1,1 0 0,0,1 431.55079006772 236.314938154139 133.079 646.817155756208 279.327307326356 186.266 602.562076749436 267.825404376784 195.976 0 0 chimp,cow,dog,elephant,guinea_pig,horse,human,macaque,marmoset,mouse,opossum,orangutan,panda,pig,platypus,rabbit,rat, lincRNA processed_transcript A549@2.26858,AG04450@1.16534,BJ@1.3058,GM12878@1.96832,H1HESC@3.09884,HELAS3@3.56316,HEPG2@8.90585,HMEC@0.323533,HSMM@1.24528,HUVEC@4.39081,K562@6.21815,MCF7@1.74967,NHEK@0.779064,NHLF@0.256506,SKNSHRA@5.06065, 0 0 0 0 ENSG00000224409.1 ENST00000421619.1 chr1:33183335-33190838 2 393 7108 intergenic -1.09 0 0,1,0 1 0,0,0 5.34351145038168 6.8240011254924 53.1 9.12213740458015 13.2884074282499 80.101 10.8396946564886 13.3166854248734 80.726 0 0 cat,chimp,human,macaque,marmoset,orangutan, antisense antisense A549@0.831874,AG04450@0.0858125,BJ@0.070467,GM12878@0,H1HESC@0.048888,HELAS3@0.100104,HEPG2@0.216122,HMEC@0,HSMM@0.01098,HUVEC@0.092135,K562@0.0474975,MCF7@0.0101795,NHEK@0.181621,NHLF@0,SKNSHRA@0.0945065, 0 0 0 0 ENSG00000236065.2 ENST00000427524.1 chr1:33452676-33498070 2 1678 43714 intronic 11.36 1 0,0,0 0 0,0,0 32.6221692491061 20.6795305851672 0 8.63528009535161 22.2689527382532 3.224 121.945172824791 33.1486709063458 77.078 0 0 chimp,horse,human,macaque,marmoset,opossum,orangutan,rabbit, processed_transcript processed_transcript A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000225313.1 ENST00000457957.1 chr1:33780296-33791644 2 550 10796 exonic 5.07 1 0,0,0 0 0,0,0 0 74.0622452760282 0 0 50.4683216005928 0 0 45.6331974805484 0 0 0 chimp,human,macaque,orangutan, antisense antisense A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0.0145255,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0.007455,HUVEC@0,K562@0,MCF7@0.003642,NHEK@0,NHLF@0,SKNSHRA@0.024528, 0 0 0 0 ENSG00000233246.1 ENST00000432703.1 chr1:33815953-33828846 3 487 12402 intronic 0.53 1 0,0,1 0 0,0,0 19.3511293634497 9.25221738429286 0 0 19.9773423641348 215.414 0 21.9346073213998 192.282 0 0 chimp,horse,human,macaque,marmoset,orangutan, antisense antisense A549@0.190779,AG04450@0.027909,BJ@0,GM12878@0.0900725,H1HESC@0.0347525,HELAS3@0.696419,HEPG2@0.305075,HMEC@0.008356,HSMM@0.0344995,HUVEC@0,K562@0.817398,MCF7@0.146433,NHEK@0.00537667,NHLF@0.0078755,SKNSHRA@0.30044, 0 0 0 0 ENSG00000231163.1 ENST00000425631.1 chr1:34334554-34351059 8 1359 15132 intronic 0.94 1 0,0,0 0 0,0,0 24.794701986755 18.1157150409728 30.504 35.3649742457689 15.2228390166534 1.673 41.1295069904341 15.8924795136135 1.215 0 0 chimp,elephant,horse,human,marmoset,orangutan,panda, antisense antisense A549@0.005563,AG04450@0,BJ@0,GM12878@0.0031205,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000231163.1 ENST00000434181.1 chr1:34335798-34339368 3 652 2914 intronic -1.13 0 0,0,0 0 0,0,0 0 0 0 0 1.2302676733013 2.43 0 1.2920384351407 2.502 0 0 cat,chimp,elephant,guinea_pig,horse,human,macaque,marmoset,orangutan, antisense antisense A549@0.005563,AG04450@0,BJ@0,GM12878@0.0031205,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000231163.1 ENST00000432447.1 chr1:34335827-34339309 3 497 2981 intronic -1.13 0 0,0,0 0 0,0,0 0 0 0 0 1.20261657162026 2.43 0 1.2629989936263 2.502 0 0 chimp,guinea_pig,horse,human,macaque,marmoset,orangutan, antisense antisense A549@0.005563,AG04450@0,BJ@0,GM12878@0.0031205,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000231163.1 ENST00000414868.1 chr1:34335827-34339412 3 543 3038 intronic -1.13 0 0,0,0 0 0,0,0 0 0 0 0 1.18005266622778 2.43 0 1.2393021724819 2.502 0 0 chimp,guinea_pig,horse,human,macaque,marmoset,orangutan, antisense antisense A549@0.005563,AG04450@0,BJ@0,GM12878@0.0031205,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000231163.1 ENST00000438719.1 chr1:34336152-34339248 2 556 2538 intronic -1.13 0 0,0,1 0 0,0,0 0 0 0 0 1.41252955082742 2.43 0 1.48345153664303 2.502 0 0 chimp,guinea_pig,human,macaque,marmoset,orangutan,panda, antisense antisense A549@0.005563,AG04450@0,BJ@0,GM12878@0.0031205,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000231163.1 ENST00000431046.1 chr1:34341067-34351024 3 643 9310 intronic 0.94 1 0,0,0 0 0,0,0 33.298600311042 23.8915145005371 51.697 53.0808709175739 20.6908700322234 31.705 65.1010886469673 21.3930182599355 35.049 0 0 chimp,cow,elephant,horse,human,marmoset,orangutan,panda, antisense antisense A549@0.005563,AG04450@0,BJ@0,GM12878@0.0031205,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000255811.1 ENST00000542839.1 chr1:35227027-35253698 2 558 26111 exonic 4.21 0 0,1,1 0 0,0,0 257.372759856631 2.94239975489257 8.126 250.433691756272 14.5322660947493 0 290.872759856631 16.4998659568764 0 0 0 cat,chimp,cow,dog,elephant,guinea_pig,horse,human,macaque,marmoset,mouse,opossum,orangutan,panda,pig,platypus,rabbit,rat, antisense antisense A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0.016656,HMEC@0.025931,HSMM@0,HUVEC@0.045822,K562@0,MCF7@0,NHEK@0.0163613,NHLF@0,SKNSHRA@0.013172, 0 0 0 0 ENSG00000230163.1 ENST00000429293.1 chr1:35316295-35317156 2 718 141 intergenic -3.96 0 0,1,0 0 0,0,0 0 0 0 6.39275766016713 0 1.195 6.58217270194986 0 1.215 0 0 cat,chimp,elephant,guinea_pig,horse,human,macaque,marmoset,panda, antisense antisense A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0.0064495,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000241014.1 ENST00000311990.4 chr1:35441300-35444307 3 1884 1119 intergenic 42.55 0 0,1,1 0 0,0,0 6.22611464968153 87.5889186773905 15.774 23.3975583864119 57.6514745308311 31.048 76.6809978768578 58.3681858802502 31.513 0 0 chimp,cow,elephant,horse,human,macaque,marmoset,orangutan, processed_transcript processed_transcript A549@0.407334,AG04450@0.5828,BJ@1.01671,GM12878@0.641217,H1HESC@0.769392,HELAS3@0.45517,HEPG2@0.631082,HMEC@0.165432,HSMM@0.55672,HUVEC@1.45865,K562@0.427493,MCF7@0.351601,NHEK@0.306751,NHLF@0.425578,SKNSHRA@2.40395, 0 0 0 0 ENSG00000227409.1 ENST00000432683.1 chr1:35824423-35831678 2 457 6796 exonic -1.44 0 0,0,0 0 0,0,0 500.450765864333 128.802825191289 0 581.503282275711 136.333872866392 91.132 524.391684901532 129.419952913479 99.144 0 0 cat,chimp,cow,dog,elephant,guinea_pig,horse,human,macaque,marmoset,mouse,opossum,orangutan,panda,pig,platypus,rabbit,rat, antisense antisense A549@0.023645,AG04450@0.040608,BJ@0.080121,GM12878@0.0101775,H1HESC@0.012681,HELAS3@0.005092,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0.035995,MCF7@0,NHEK@0.005023,NHLF@0,SKNSHRA@0.0317075, 0 0 0 0 ENSG00000239636.1 ENST00000425881.1 chr1:36035414-36039348 2 281 3651 exonic -1.65 1 0,0,1 0 0,0,0 0 18.1531087373322 0 64.0427046263345 15.413859216653 135.958 70.6049822064057 20.6132566420159 231.476 0 0 cat,chimp,horse,human,marmoset,orangutan,panda, antisense antisense A549@0.006484,AG04450@0.0184495,BJ@0.0619995,GM12878@0.030935,H1HESC@0.027749,HELAS3@0.008014,HEPG2@0.018602,HMEC@0.014418,HSMM@0.0104415,HUVEC@0.0126935,K562@0.0557095,MCF7@0.009653,NHEK@0.0260443,NHLF@0.0045295,SKNSHRA@0.0735535, 0 0 0 0 ENSG00000239636.1 ENST00000444348.1 chr1:36035416-36043330 3 849 7061 exonic 4.47 1 1,1,1 0 0,1,0 0 10.4456875796629 0 8.15076560659599 36.9777651890667 0 27.319199057715 51.5653590143039 0 0 0 chimp,cow,horse,human,macaque,orangutan, antisense antisense A549@0.006484,AG04450@0.0184495,BJ@0.0619995,GM12878@0.030935,H1HESC@0.027749,HELAS3@0.008014,HEPG2@0.018602,HMEC@0.014418,HSMM@0.0104415,HUVEC@0.0126935,K562@0.0557095,MCF7@0.009653,NHEK@0.0260443,NHLF@0.0045295,SKNSHRA@0.0735535, 0 0 0 0 ENSG00000225306.1 ENST00000452217.1 chr1:36057977-36059256 2 434 843 intronic 0 0 0,1,0 0 0,0,0 0 0 0 0 0 0 0 0 0 0 0 chimp,cow,guinea_pig,horse,human,macaque,marmoset,orangutan,panda,rabbit, antisense antisense A549@0,AG04450@0,BJ@0.033991,GM12878@0,H1HESC@0,HELAS3@0.022122,HEPG2@0.0110515,HMEC@0,HSMM@0,HUVEC@0,K562@0.0020015,MCF7@0,NHEK@0.021737,NHLF@0,SKNSHRA@0.009962, 0 0 0 0 ENSG00000232335.1 ENST00000373226.2 chr1:36204990-36209177 2 537 3648 exonic 2.31 1 0,0,0 0 0,0,0 161.746741154562 2.98876096491228 131.724 230.938547486034 13.5572916666667 176.562 234.275605214153 14.046875 162.704 0 0 cat,chimp,cow,dog,elephant,guinea_pig,horse,human,macaque,marmoset,mouse,opossum,orangutan,panda,rabbit,rat, antisense antisense A549@0.144012,AG04450@0.045899,BJ@0.0886355,GM12878@0.388624,H1HESC@0.230421,HELAS3@0.406469,HEPG2@0.230779,HMEC@0.032474,HSMM@0.019087,HUVEC@0,K562@0.435381,MCF7@0.113592,NHEK@0.0463807,NHLF@0.0143995,SKNSHRA@0.025271, 0 0 0 0 ENSG00000242815.1 ENST00000446354.1 chr1:36546712-36547923 2 496 713 intergenic -0.81 0 0,0,1 0 0,0,0 40.3427419354839 6.45161290322581 0 2.40927419354839 0 0 25.6411290322581 0 0 0 0 cat,chimp,cow,elephant,horse,human,macaque,marmoset,orangutan,panda,pig,rabbit, processed_transcript processed_transcript A549@0,AG04450@0.0059445,BJ@0,GM12878@0.004048,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0.0041285,NHEK@0.005357,NHLF@0,SKNSHRA@0.028524, 0 0 0 0 ENSG00000234481.1 ENST00000451375.1 chr1:37238741-37241369 2 461 2165 intergenic 2.10 0 0,0,0 0 0,0,0 176.095444685466 22.0960739030023 0 157.407809110629 39.537182448037 0 159.227765726681 38.5713625866051 0 0 0 chimp,elephant,horse,human,orangutan, antisense antisense A549@0.0145685,AG04450@0.012788,BJ@0,GM12878@0.0057355,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000223944.1 ENST00000413901.1 chr1:37728340-37790701 4 592 61763 intergenic -3.09 0 0,0,0 0 0,0,0 15.9290540540541 32.4294804332691 385.637 16.7043918918919 32.4357301296893 383.096 17.0185810810811 33.1060991208329 313.401 0 0 cat,chimp,elephant,horse,human,macaque,marmoset,orangutan,rabbit, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000233621.1 ENST00000424989.1 chr1:37920480-37940012 3 1392 18136 intergenic 1.13 1 1,1,1 1 0,0,0 53.7047413793103 0.815505072783414 0 33.5215517241379 6.21404940449934 50.797 38.2183908045977 7.7706771063079 46.366 0 0 chimp,human,macaque,marmoset,mouse,orangutan, antisense antisense A549@8.16362,AG04450@1.26614,BJ@1.78014,GM12878@0.519768,H1HESC@0.419567,HELAS3@5.66264,HEPG2@2.31257,HMEC@1.84546,HSMM@2.14022,HUVEC@0.900331,K562@0.230901,MCF7@2.0097,NHEK@1.70028,NHLF@1.05795,SKNSHRA@2.58262, 0 0 0 0 ENSG00000233728.1 ENST00000433474.1 chr1:38265392-38266551 2 698 459 exonic -1.45 0 0,0,0 0 0,0,0 441.641833810888 54.0305010893246 54.901 349.60888252149 40.1786492374728 41.491 358.660458452722 43.3856209150327 34.579 0 0 cat,chimp,cow,dog,elephant,guinea_pig,horse,human,macaque,marmoset,orangutan,panda,rabbit, antisense antisense A549@0.027164,AG04450@0.0126875,BJ@0.009246,GM12878@0.151733,H1HESC@0.126748,HELAS3@0.071556,HEPG2@0.066245,HMEC@0,HSMM@0,HUVEC@0.015696,K562@0.124739,MCF7@0.046832,NHEK@0.00370967,NHLF@0,SKNSHRA@0.0129815, 0 0 0 0 ENSG00000230955.1 ENST00000419993.1 chr1:38326369-38327252 2 479 402 exonic -3.29 1 0,1,0 0 0,0,0 18.6388308977035 0 0 35.9311064718163 35.2114427860697 13.725 49.0062630480167 38.5671641791045 9.606 0 0 chimp,human,macaque,marmoset,orangutan, antisense antisense A549@0.014023,AG04450@0,BJ@0,GM12878@0.09998,H1HESC@0.078125,HELAS3@0.047198,HEPG2@0.0907355,HMEC@1.75137,HSMM@0.013756,HUVEC@0.011242,K562@0.109075,MCF7@0.051021,NHEK@0.0196877,NHLF@0.008113,SKNSHRA@0.0377435, 0 0 0 0 ENSG00000224592.1 ENST00000432922.1 chr1:38512986-38571406 4 589 57825 intergenic 1.22 0 0,1,0 0 0,0,0 30.2631578947368 41.567747514051 575 20.53480475382 46.1710678772158 475.914 9.28522920203735 84.7939299610896 572.201 0 0 chimp,cow,dog,elephant,guinea_pig,human,macaque,marmoset,orangutan,pig, antisense antisense A549@0.0048205,AG04450@0.032087,BJ@0.0324115,GM12878@0.020149,H1HESC@0.315126,HELAS3@0,HEPG2@0,HMEC@0.399359,HSMM@0.0370715,HUVEC@0,K562@0,MCF7@0.0192115,NHEK@0.261587,NHLF@0,SKNSHRA@0.0126225, 0 0 0 0 ENSG00000224592.1 ENST00000428151.1 chr1:38513097-38584697 5 568 71024 intergenic 1.22 0 0,1,0 0 0,0,0 0 48.4118607794548 529.575 2.41549295774648 54.4074538184276 423.667 5.42957746478873 85.5021823608921 486.785 0 0 chimp,elephant,guinea_pig,horse,human,macaque,marmoset,mouse,orangutan,pig, antisense antisense A549@0.0048205,AG04450@0.032087,BJ@0.0324115,GM12878@0.020149,H1HESC@0.315126,HELAS3@0,HEPG2@0,HMEC@0.399359,HSMM@0.0370715,HUVEC@0,K562@0,MCF7@0.0192115,NHEK@0.261587,NHLF@0,SKNSHRA@0.0126225, 0 0 0 0 ENSG00000237290.1 ENST00000431311.1 chr1:38674706-38680439 4 2279 3448 intergenic 4.43 1 0,0,0 0 0,0,0 49.7095217200527 51.1073085846868 0 76.9912242211496 62.0324825986079 0 73.0640631856077 71.181554524362 0 0 0 chimp,cow,horse,human,macaque,marmoset,orangutan,pig,rat, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0.005124,H1HESC@0.012146,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000238063.1 ENST00000452971.1 chr1:38940868-38942156 3 787 497 intergenic -0.58 1 0,0,1 0 0,0,0 247.099110546379 110.651911468813 43.68 332.517153748412 67.2655935613682 6.41 349.8208386277 75.8993963782696 19.2 0 0 cat,cow,dog,elephant,horse,human,macaque,marmoset,mouse,opossum,orangutan,panda,pig,rabbit, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0.0178025,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000228436.1 ENST00000433671.1 chr1:39325672-39385068 4 627 58763 exonic 9.12 0 1,1,1 1 0,0,0 104.74322169059 35.1365314909041 170.221 94.6379585326954 32.1181185439818 200.113 110.395534290271 35.215935197318 227.951 0 0 cat,chimp,cow,dog,elephant,guinea_pig,horse,human,macaque,marmoset,orangutan,panda,pig,rabbit,rat, antisense antisense A549@0.158264,AG04450@0.480283,BJ@0.370339,GM12878@0.422598,H1HESC@0.239765,HELAS3@0.503454,HEPG2@0.788091,HMEC@0.089567,HSMM@0.134405,HUVEC@0.952076,K562@0.124673,MCF7@0.283454,NHEK@0.378299,NHLF@0.814722,SKNSHRA@1.08105, 0 0 0 0 ENSG00000228436.1 ENST00000456813.1 chr1:39325755-39341896 2 439 15700 exonic 2.63 0 1,1,1 1 0,0,0 417.603644646925 88.4075796178344 155.229 285.822323462415 83.1376433121019 200.113 321.002277904328 87.6967515923567 226.493 0 0 cat,chimp,cow,dog,elephant,guinea_pig,horse,human,macaque,marmoset,opossum,orangutan,pig,rabbit,rat, antisense antisense A549@0.158264,AG04450@0.480283,BJ@0.370339,GM12878@0.422598,H1HESC@0.239765,HELAS3@0.503454,HEPG2@0.788091,HMEC@0.089567,HSMM@0.134405,HUVEC@0.952076,K562@0.124673,MCF7@0.283454,NHEK@0.378299,NHLF@0.814722,SKNSHRA@1.08105, 0 0 0 0 ENSG00000228436.1 ENST00000443161.1 chr1:39339114-39341898 2 422 2360 exonic 2.63 0 0,1,1 0 0,0,0 434.42654028436 213.679661016949 117.498 336.689573459716 90.7762711864407 269.889 364.751184834123 152.386440677966 230.619 0 0 cat,chimp,cow,dog,elephant,guinea_pig,horse,human,macaque,marmoset,orangutan,panda,pig,rabbit, antisense antisense A549@0.158264,AG04450@0.480283,BJ@0.370339,GM12878@0.422598,H1HESC@0.239765,HELAS3@0.503454,HEPG2@0.788091,HMEC@0.089567,HSMM@0.134405,HUVEC@0.952076,K562@0.124673,MCF7@0.283454,NHEK@0.378299,NHLF@0.814722,SKNSHRA@1.08105, 0 0 0 0 ENSG00000226438.1 ENST00000289890.7 chr1:39715510-39723321 3 555 7252 exonic -1.20 1 0,1,0 0 0,0,0 106.67027027027 46.8018477661335 37.407 103.504504504505 49.3429398786542 65.933 118.252252252252 45.0551571980144 75.464 0 0 cat,chimp,cow,guinea_pig,human,macaque,marmoset,mouse,orangutan,panda,rabbit, antisense antisense A549@0,AG04450@0.0057785,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0.0048205, 0 0 0 0 ENSG00000182109.3 ENST00000441741.1 chr1:39987952-39990548 4 489 2101 exonic 0 1 0,0,1 0 0,0,0 33.0572597137014 16.5954307472632 39.432 69.961145194274 28.9566872917658 86.233 80.7259713701431 29.5126130414089 93.066 0 0 cat,chimp,cow,elephant,human,macaque,marmoset,orangutan,pig, processed_transcript processed_transcript A549@1.1913,AG04450@0.364345,BJ@0.61707,GM12878@1.51276,H1HESC@1.27185,HELAS3@1.28445,HEPG2@0.400635,HMEC@0.398092,HSMM@0.431157,HUVEC@0.272408,K562@0.145569,MCF7@0.106824,NHEK@0.671099,NHLF@0.148856,SKNSHRA@2.4638, 0 0 0 0 ENSG00000182109.3 ENST00000331856.2 chr1:39987952-39991357 3 2238 1163 exonic 0.32 1 0,0,1 0 0,0,0 7.22296693476318 29.9802235597592 39.432 23.7131367292225 52.311263972485 66.783 26.7587131367292 53.3155631986242 72.164 0 0 chimp,human,macaque,marmoset,orangutan, processed_transcript processed_transcript A549@1.1913,AG04450@0.364345,BJ@0.61707,GM12878@1.51276,H1HESC@1.27185,HELAS3@1.28445,HEPG2@0.400635,HMEC@0.398092,HSMM@0.431157,HUVEC@0.272408,K562@0.145569,MCF7@0.106824,NHEK@0.671099,NHLF@0.148856,SKNSHRA@2.4638, 0 0 0 0 ENSG00000182109.3 ENST00000458207.1 chr1:39987952-40002954 5 688 14306 exonic -1.51 1 0,0,1 0 0,0,0 23.4956395348837 11.1299454774221 0 49.7252906976744 17.3516007269677 0 57.3764534883721 19.3379700824829 0 0 0 chimp,elephant,human,macaque,marmoset,orangutan,rat, processed_transcript processed_transcript A549@1.1913,AG04450@0.364345,BJ@0.61707,GM12878@1.51276,H1HESC@1.27185,HELAS3@1.28445,HEPG2@0.400635,HMEC@0.398092,HSMM@0.431157,HUVEC@0.272408,K562@0.145569,MCF7@0.106824,NHEK@0.671099,NHLF@0.148856,SKNSHRA@2.4638, 0 0 0 0 ENSG00000182109.3 ENST00000450157.1 chr1:39987952-40007432 4 595 18879 exonic -7.02 1 0,0,1 0 0,0,0 27.1680672268908 8.68859579426877 0 77.7714285714286 14.4028815085545 15.059 104.776470588235 17.1492663806346 204.149 0 0 cat,chimp,horse,human,macaque,marmoset,mouse,orangutan,pig,rabbit,rat, processed_transcript processed_transcript A549@1.1913,AG04450@0.364345,BJ@0.61707,GM12878@1.51276,H1HESC@1.27185,HELAS3@1.28445,HEPG2@0.400635,HMEC@0.398092,HSMM@0.431157,HUVEC@0.272408,K562@0.145569,MCF7@0.106824,NHEK@0.671099,NHLF@0.148856,SKNSHRA@2.4638, 0 0 0 0 ENSG00000182109.3 ENST00000431553.1 chr1:39987952-40007513 3 494 19063 exonic 0.66 1 0,0,1 0 0,0,0 32.7226720647773 8.60473167916907 0 124.97975708502 14.2638619314903 0 228.186234817814 16.9837381314588 153.767 0 0 cat,chimp,cow,dog,elephant,guinea_pig,horse,human,macaque,marmoset,mouse,orangutan,panda,pig,rabbit,rat, processed_transcript processed_transcript A549@1.1913,AG04450@0.364345,BJ@0.61707,GM12878@1.51276,H1HESC@1.27185,HELAS3@1.28445,HEPG2@0.400635,HMEC@0.398092,HSMM@0.431157,HUVEC@0.272408,K562@0.145569,MCF7@0.106824,NHEK@0.671099,NHLF@0.148856,SKNSHRA@2.4638, 0 0 0 0 ENSG00000182109.3 ENST00000417869.1 chr1:39987952-40011433 4 483 22992 exonic 3.64 1 0,0,1 0 0,0,0 33.4679089026915 7.13430758524704 0 136.782608695652 12.3109777313848 19.705 258.923395445135 21.2822720946416 41.086 0 0 cat,chimp,cow,dog,elephant,horse,human,macaque,marmoset,mouse,orangutan,panda,pig,rabbit,rat, processed_transcript processed_transcript A549@1.1913,AG04450@0.364345,BJ@0.61707,GM12878@1.51276,H1HESC@1.27185,HELAS3@1.28445,HEPG2@0.400635,HMEC@0.398092,HSMM@0.431157,HUVEC@0.272408,K562@0.145569,MCF7@0.106824,NHEK@0.671099,NHLF@0.148856,SKNSHRA@2.4638, 0 0 0 0 ENSG00000182109.3 ENST00000440190.1 chr1:39987952-40011859 2 679 23226 exonic 19.20 1 0,0,1 0 0,0,0 23.8070692194404 7.06243003530526 0 85.7761413843888 13.3872814948764 0 137.450662739323 24.2750365969172 0 0 0 cat,chimp,dog,elephant,horse,human,macaque,marmoset,mouse,orangutan,pig,rabbit,rat, processed_transcript processed_transcript A549@1.1913,AG04450@0.364345,BJ@0.61707,GM12878@1.51276,H1HESC@1.27185,HELAS3@1.28445,HEPG2@0.400635,HMEC@0.398092,HSMM@0.431157,HUVEC@0.272408,K562@0.145569,MCF7@0.106824,NHEK@0.671099,NHLF@0.148856,SKNSHRA@2.4638, 0 0 0 0 ENSG00000228060.1 ENST00000415255.1 chr1:40030832-40038875 4 547 7490 exonic -1.62 0 0,1,1 0 0,0,0 229.822669104205 115.253538050734 205.774 218.159049360146 127.559012016021 221.763 219.811700182815 120.803204272363 192 0 0 cat,chimp,cow,dog,elephant,guinea_pig,horse,human,macaque,marmoset,mouse,orangutan,panda,pig,rabbit,rat, antisense antisense A549@0.0039395,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0.006343,K562@0.0044575,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000225903.1 ENST00000424418.1 chr1:40099088-40099575 2 302 183 intronic 1.12 0 0,0,0 0 0,0,0 26.887417218543 0 141.147 7.39072847682119 0 191.003 7.48013245033113 0 186.384 0 0 chimp,elephant,human,macaque,marmoset,orangutan,panda,pig,rabbit, antisense antisense A549@0,AG04450@0,BJ@0.0079605,GM12878@0,H1HESC@0.0097755,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0.0634965,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0.012694,SKNSHRA@0, 0 0 0 0 ENSG00000236546.1 ENST00000418255.1 chr1:40363417-40364770 2 783 568 exonic -0.11 1 0,0,1 0 0,0,0 341.784163473819 534.140845070423 653.49 278.697318007663 586.978873239437 441.836 257.88122605364 494.213028169014 356.301 0 0 chimp,cow,dog,guinea_pig,human,macaque,marmoset,mouse,orangutan,panda,rat, antisense antisense A549@0.0110605,AG04450@0.0893445,BJ@0.657296,GM12878@0.010272,H1HESC@0.0116355,HELAS3@0.204484,HEPG2@0.0714225,HMEC@0.078241,HSMM@0.462366,HUVEC@0.0432295,K562@0.0491655,MCF7@0.0182185,NHEK@0.23624,NHLF@0.12591,SKNSHRA@0, 0 0 0 0 ENSG00000225627.1 ENST00000435785.1 chr1:40747986-40749177 2 449 740 intronic -6.38 0 0,1,0 0 0,0,0 0 0 158.466 0 0 137.841 0 11.1648648648649 123.921 0 0 chimp,human,macaque,orangutan, antisense antisense A549@0.016271,AG04450@0.0540835,BJ@0.039248,GM12878@0.047749,H1HESC@0.0661,HELAS3@0.129545,HEPG2@0.0564065,HMEC@0,HSMM@0,HUVEC@0.0339955,K562@0.264766,MCF7@0,NHEK@0.0171927,NHLF@0,SKNSHRA@0.010505, 0 0 0 0 ENSG00000238287.1 ENST00000450713.1 chr1:40958829-40974333 2 603 14899 intronic -11.49 0 0,1,0 1 0,0,0 0 40.5644002953218 0 5.75787728026534 34.4230485267468 1.841 9.44941956882255 53.4568091818243 1.855 0 0 chimp,human,macaque,orangutan, antisense antisense A549@0.079255,AG04450@0.0446155,BJ@0.048416,GM12878@0.312424,H1HESC@0.049424,HELAS3@0.141045,HEPG2@0.208685,HMEC@0.115056,HSMM@0.175185,HUVEC@0.0930675,K562@0.0247895,MCF7@0.315912,NHEK@0.021461,NHLF@0.195872,SKNSHRA@0.273898, 0 0 0 0 ENSG00000227278.1 ENST00000453437.1 chr1:40980133-40980729 2 430 164 exonic 4.06 1 0,1,0 0 0,0,0 532.209302325581 575 223.1 295.818604651163 207.182926829268 252.141 298.386046511628 175.268292682927 256.069 0 0 cat,chimp,cow,dog,elephant,guinea_pig,horse,human,macaque,marmoset,mouse,orangutan,panda,pig,rabbit,rat, antisense antisense A549@0,AG04450@0.0051885,BJ@0,GM12878@0,H1HESC@0,HELAS3@0.0209215,HEPG2@0.043678,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0.0177135, 0 0 0 0 ENSG00000238186.1 ENST00000437060.1 chr1:40981426-40982846 2 544 874 exonic -2.01 0 0,0,0 0 0,0,0 0 0 0 17.2628676470588 0 2.39 20.4632352941176 0 5.565 0 0 cat,chimp,dog,guinea_pig,horse,human,macaque,marmoset,orangutan,panda,pig,rabbit, antisense antisense A549@0,AG04450@0.0059055,BJ@0,GM12878@0,H1HESC@0,HELAS3@0.032412,HEPG2@0.121637,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0.014729,NHEK@0.004825,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000237899.1 ENST00000440100.1 chr1:41134761-41153260 5 466 18025 intergenic 1.35 0 0,1,0 0 0,0,0 0 6.17686546463246 0 12.1244635193133 10.0036615811373 2.16 12.4892703862661 12.7713730929265 15.33 0 0 chimp,horse,human,macaque,marmoset,orangutan,panda, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0.0112695,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0.0470165,MCF7@0.034535,NHEK@0,NHLF@0,SKNSHRA@0.0173255, 0 0 0 0 ENSG00000229528.1 ENST00000414199.1 chr1:41329586-41342342 3 468 12284 intergenic -4.37 1 0,0,1 0 0,0,0 0 0 39.676 9.3482905982906 3.28638879843699 52.544 9.63247863247863 5.50976880494953 52.841 0 0 chimp,human, antisense antisense A549@0.026776,AG04450@0.0047585,BJ@0,GM12878@0.00428,H1HESC@0,HELAS3@0.184071,HEPG2@0,HMEC@0.008693,HSMM@0.166816,HUVEC@0,K562@0.0056845,MCF7@0,NHEK@0.022146,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000235358.1 ENST00000425554.1 chr1:41708045-41730230 3 620 21561 intergenic -0.26 1 0,1,1 0 0,0,0 0 18.1458188395714 0 6.1741935483871 17.5754371318585 82.02 20.3193548387097 23.514725662075 112 0 0 cat,dog,human,marmoset,orangutan,rabbit, lincRNA lincRNA A549@0.005374,AG04450@0.00378,BJ@0.003952,GM12878@0.01025,H1HESC@0.051053,HELAS3@0.0879815,HEPG2@0.088633,HMEC@0,HSMM@0.0122285,HUVEC@0.003903,K562@0.0262715,MCF7@0.008839,NHEK@0,NHLF@0.003097,SKNSHRA@0.0239165, 0 0 0 0 ENSG00000235358.1 ENST00000445073.1 chr1:41708247-41750533 2 707 41577 intergenic 0 0 0,1,1 0 0,0,0 13.3380480905233 19.102508598504 0 6.66478076379066 23.0046179378021 79.127 9.37199434229137 30.9319575726965 114.846 0 0 cat,chimp,cow,dog,elephant,horse,human,macaque,marmoset,orangutan,panda, lincRNA lincRNA A549@0.005374,AG04450@0.00378,BJ@0.003952,GM12878@0.01025,H1HESC@0.051053,HELAS3@0.0879815,HEPG2@0.088633,HMEC@0,HSMM@0.0122285,HUVEC@0.003903,K562@0.0262715,MCF7@0.008839,NHEK@0,NHLF@0.003097,SKNSHRA@0.0239165, 0 0 0 0 ENSG00000235358.1 ENST00000422305.1 chr1:41726453-41730225 3 511 3257 intergenic 5.60 1 0,0,1 0 0,0,0 0 3.88916180534234 0 4.36986301369863 1.39422781700952 0 6.61448140900196 1.44703715075223 0 0 0 chimp,dog,elephant,human,macaque,marmoset,orangutan,panda,rabbit, lincRNA lincRNA A549@0.005374,AG04450@0.00378,BJ@0.003952,GM12878@0.01025,H1HESC@0.051053,HELAS3@0.0879815,HEPG2@0.088633,HMEC@0,HSMM@0.0122285,HUVEC@0.003903,K562@0.0262715,MCF7@0.008839,NHEK@0,NHLF@0.003097,SKNSHRA@0.0239165, 0 0 0 0 ENSG00000229901.1 ENST00000429109.1 chr1:41840676-41841341 2 392 271 intronic -3.51 1 0,0,1 0 0,0,0 0 0 233.835 0 0 301.421 0 0 289.962 0 0 chimp,human,macaque,marmoset,orangutan, antisense antisense A549@0.134136,AG04450@0.0119545,BJ@0.0619535,GM12878@0,H1HESC@0.053718,HELAS3@0.315929,HEPG2@0.103848,HMEC@0,HSMM@0.0052225,HUVEC@0.116334,K562@0,MCF7@0,NHEK@0.0190333,NHLF@0.0103085,SKNSHRA@0.16527, 0 0 0 0 ENSG00000230881.1 ENST00000440249.1 chr1:42001114-42001539 2 263 160 intronic -13.69 0 0,1,0 0 0,0,0 0 0 0 7.54372623574144 0 10.326 7.63498098859316 0 12.333 0 0 chimp,horse,human,macaque,marmoset,orangutan,rabbit, antisense antisense A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000227527.1 ENST00000436207.1 chr1:42801057-42804047 2 658 2330 intronic 4.19 0 0,0,1 0 0,0,0 0 17.8969957081545 0 0 8.70515021459227 4.582 0 9.73648068669528 4.643 0 0 chimp,human,macaque, processed_transcript processed_transcript A549@0.023461,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0.0266965,HEPG2@0.026075,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000234917.1 ENST00000414339.1 chr1:43144406-43147325 2 594 2323 intergenic -11.74 1 0,1,1 0 0,0,0 19.7474747474747 0 0 12.1212121212121 5.60309944037882 3.585 12.2828282828283 9.2970297029703 3.645 0 0 cat,chimp,cow,elephant,horse,human,macaque,marmoset,mouse,orangutan,pig,rabbit, lincRNA lincRNA A549@0.0807795,AG04450@0.067532,BJ@0.0779925,GM12878@0.498189,H1HESC@0.181019,HELAS3@0.194629,HEPG2@0.202636,HMEC@0.041221,HSMM@0.268336,HUVEC@0.009073,K562@0.398439,MCF7@0.160675,NHEK@0.265542,NHLF@0.0229165,SKNSHRA@0.149423, 0 0 0 0 ENSG00000234866.1 ENST00000436098.1 chr1:43221886-43222881 2 463 530 intronic -1.23 0 0,1,1 0 0,0,0 43.3866090712743 0 6.496 70.6004319654428 0.450943396226415 41.476 71.3585313174946 0.473584905660377 53.336 0 0 cat,chimp,cow,dog,elephant,horse,human,macaque,marmoset,mouse,orangutan,panda,rat, antisense antisense A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0.050633,NHEK@0.0198327,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000228452.1 ENST00000447572.1 chr1:43241484-43242461 2 482 493 intronic 0.09 1 0,0,0 0 0,0,0 0 0 0 0 0 0 0 0 0 0 0 chimp,human,macaque,orangutan, antisense antisense A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0.0093915, 0 0 0 0 ENSG00000243153.1 ENST00000414798.1 chr1:43300352-43312093 2 512 11227 exonic 0.30 0 0,1,0 1 0,0,0 0 11.6000712567917 18.224 27.482421875 34.7379531486595 34.337 26.0859375 37.3134408123274 48.272 0 0 chimp,human,macaque,marmoset,mouse,orangutan,rat, antisense antisense A549@0.0383495,AG04450@0.050358,BJ@0.029709,GM12878@0.125602,H1HESC@0.258318,HELAS3@0.0699265,HEPG2@0.074893,HMEC@0.069041,HSMM@0.023091,HUVEC@0.051593,K562@0.189983,MCF7@0.0172295,NHEK@0.0686617,NHLF@0.063061,SKNSHRA@0.125831, 0 0 0 0 ENSG00000241784.1 ENST00000416809.1 chr1:43302603-43312033 3 619 8807 exonic -10.00 0 1,1,1 1 0,0,0 0 14.7875553536959 8.16 37.9644588045234 38.6913818553423 34.337 39.4184168012924 41.0031792892018 45.887 0 0 cat,chimp,cow,human,macaque,marmoset,orangutan,panda, antisense antisense A549@0.0020945,AG04450@0.004499,BJ@0.003666,GM12878@0.0589955,H1HESC@0.0418765,HELAS3@0,HEPG2@0.043213,HMEC@0.013831,HSMM@0,HUVEC@0,K562@0.0374435,MCF7@0.0112495,NHEK@0.010223,NHLF@0.0057825,SKNSHRA@0.0166135, 0 0 0 0 ENSG00000228192.2 ENST00000425076.1 chr1:43307569-43312058 5 531 3950 exonic -3.97 0 1,1,1 1 0,0,0 52.9717514124294 15.8967088607595 14.96 74.5009416195857 52.6815189873418 34.337 163.218455743879 55.08 45.887 0 0 cow,human,macaque,marmoset,orangutan, antisense antisense A549@0.0736945,AG04450@0.10021,BJ@0.049589,GM12878@0.186436,H1HESC@0.150824,HELAS3@0.16981,HEPG2@0.293808,HMEC@0.351154,HSMM@0.0455235,HUVEC@0.096223,K562@0.330216,MCF7@0.089638,NHEK@0.162989,NHLF@0.046599,SKNSHRA@0.259111, 0 0 0 0 ENSG00000228192.2 ENST00000444563.1 chr1:43307569-43312058 5 605 3876 exonic -3.97 0 1,1,1 1 0,0,0 46.4925619834711 16.2002063983488 14.96 65.3884297520661 53.687306501548 34.337 143.254545454545 56.1315789473684 45.887 0 0 chimp,human,macaque,marmoset,orangutan, antisense antisense A549@0.0736945,AG04450@0.10021,BJ@0.049589,GM12878@0.186436,H1HESC@0.150824,HELAS3@0.16981,HEPG2@0.293808,HMEC@0.351154,HSMM@0.0455235,HUVEC@0.096223,K562@0.330216,MCF7@0.089638,NHEK@0.162989,NHLF@0.046599,SKNSHRA@0.259111, 0 0 0 0 ENSG00000227533.1 ENST00000431759.1 chr1:43424720-43449029 4 1120 23183 intergenic 1.62 0 1,1,1 1 0,0,0 0 4.34982530302377 17.873 7.43392857142857 5.84613725574775 70.291 7.56964285714286 6.31812103696674 76.958 0 0 chimp,horse,human,marmoset,orangutan,panda, lincRNA processed_transcript A549@0.393027,AG04450@0.436358,BJ@0.757732,GM12878@0.413483,H1HESC@1.24585,HELAS3@0.256178,HEPG2@0.785197,HMEC@0.255829,HSMM@0.12574,HUVEC@0.445041,K562@1.99526,MCF7@0.32112,NHEK@0.784533,NHLF@0.239243,SKNSHRA@0.383652, 0 0 0 0 ENSG00000227533.1 ENST00000416689.1 chr1:43424775-43442099 3 3072 14248 intergenic 1.62 0 0,1,0 1 0,0,0 2.17708333333333 3.49234980348119 17.873 6.16731770833333 5.78116226838855 70.291 6.27018229166667 6.50891353172375 76.958 0 0 chimp,human,macaque,marmoset,orangutan, lincRNA processed_transcript A549@0.393027,AG04450@0.436358,BJ@0.757732,GM12878@0.413483,H1HESC@1.24585,HELAS3@0.256178,HEPG2@0.785197,HMEC@0.255829,HSMM@0.12574,HUVEC@0.445041,K562@1.99526,MCF7@0.32112,NHEK@0.784533,NHLF@0.239243,SKNSHRA@0.383652, 0 0 0 0 ENSG00000234694.1 ENST00000424948.1 chr1:43820355-43824329 3 658 3312 intergenic 3.05 1 1,1,1 0 0,0,0 20.7036474164134 5.61594202898551 167.23 13.7629179331307 2.33242753623188 205.853 18.7158054711246 7.15700483091787 183.499 0 0 chimp,human,macaque,orangutan, antisense antisense A549@1.9413,AG04450@0.120463,BJ@0.207972,GM12878@0.720899,H1HESC@1.06123,HELAS3@1.7028,HEPG2@1.40182,HMEC@1.64776,HSMM@0.432411,HUVEC@0.22611,K562@0.748873,MCF7@0.550029,NHEK@0.872392,NHLF@0.867721,SKNSHRA@0.271825, 0 0 0 0 ENSG00000229431.1 ENST00000436713.1 chr1:43850784-43854826 4 727 3309 exonic -1.41 1 0,1,0 0 0,0,0 87.251719394773 110.728014505893 177.248 126.91196698762 130.670595346026 89.071 108.496561210454 125.01390148081 102.66 0 0 cat,chimp,elephant,horse,human,macaque,marmoset,orangutan,panda,pig,rabbit, antisense antisense A549@0.176494,AG04450@0.027365,BJ@0.023173,GM12878@0.022238,H1HESC@0.0437,HELAS3@0.095272,HEPG2@0.0609855,HMEC@0,HSMM@0.006237,HUVEC@0.003326,K562@0.028106,MCF7@0.204104,NHEK@0.054012,NHLF@0.19116,SKNSHRA@0.0403975, 0 0 0 0 ENSG00000229372.1 ENST00000396885.2 chr1:43913447-43914315 2 697 169 exonic 5.02 1 0,1,1 0 0,0,0 270.32137733142 173.538461538462 34.224 367.22668579627 215.887573964497 55.136 390.124820659971 214.343195266272 62.242 0 0 cat,chimp,cow,dog,elephant,guinea_pig,horse,human,macaque,marmoset,mouse,opossum,orangutan,panda,pig,platypus,rabbit,rat, antisense antisense A549@0.0499185,AG04450@0.0818805,BJ@0.15577,GM12878@0.007598,H1HESC@0.174409,HELAS3@0.617255,HEPG2@0.277066,HMEC@0.011716,HSMM@0.193684,HUVEC@3.77623,K562@0.0066435,MCF7@0.166257,NHEK@0.0737037,NHLF@0.296431,SKNSHRA@0.134479, 0 0 0 0 ENSG00000229348.1 ENST00000444386.1 chr1:43919598-43922666 2 543 2523 exonic -1.74 1 0,1,0 0 0,0,1 0 18.3143083630599 26.728 6.57458563535912 4.294887039239 115.034 9.27255985267035 4.47126436781609 116.502 0 0 chimp,human,macaque,marmoset,orangutan, antisense antisense A549@0.048152,AG04450@0.0341525,BJ@0.031313,GM12878@0.0399985,H1HESC@0.02136,HELAS3@0.089202,HEPG2@0.0395905,HMEC@0.067618,HSMM@0.022906,HUVEC@0.0728695,K562@0.0353135,MCF7@0.0932275,NHEK@0.0239677,NHLF@0.021322,SKNSHRA@0.263312, 0 0 0 0 ENSG00000236200.1 ENST00000398804.3 chr1:44165436-44173809 5 587 7778 exonic 7.25 0 0,1,1 0 0,0,0 123.580919931857 73.2296220107997 0 112.468483816014 82.3858318333762 0 98.6047700170358 103.802777063512 0 0 0 chimp,guinea_pig,human,macaque,marmoset,orangutan, antisense antisense A549@0.365859,AG04450@0.104951,BJ@0.0533465,GM12878@0.71439,H1HESC@0.487547,HELAS3@1.23015,HEPG2@0.779231,HMEC@0.136546,HSMM@0.0869595,HUVEC@0.109217,K562@1.50697,MCF7@0.536792,NHEK@0.144815,NHLF@0.075922,SKNSHRA@1.18651, 0 0 0 0 ENSG00000236200.1 ENST00000439057.1 chr1:44165594-44173012 5 681 6729 exonic 7.25 0 0,1,0 1 0,0,0 106.522760646109 79.0040124832813 37.962 96.9441997063143 84.1230494872938 74.733 84.9941262848752 108.71853172834 75.811 0 0 chimp,elephant,human,macaque,marmoset,orangutan, antisense antisense A549@0.365859,AG04450@0.104951,BJ@0.0533465,GM12878@0.71439,H1HESC@0.487547,HELAS3@1.23015,HEPG2@0.779231,HMEC@0.136546,HSMM@0.0869595,HUVEC@0.109217,K562@1.50697,MCF7@0.536792,NHEK@0.144815,NHLF@0.075922,SKNSHRA@1.18651, 0 0 0 0 ENSG00000236200.1 ENST00000434346.1 chr1:44167768-44170140 3 830 1538 exonic 0.32 0 0,1,1 0 0,0,0 94.8746987951807 114.541612483745 312.968 87.0734939759036 125.282184655397 318.479 71.7457831325301 126.016905071521 296.345 0 0 chimp,cow,horse,human,macaque,orangutan,rabbit, antisense antisense A549@0.365859,AG04450@0.104951,BJ@0.0533465,GM12878@0.71439,H1HESC@0.487547,HELAS3@1.23015,HEPG2@0.779231,HMEC@0.136546,HSMM@0.0869595,HUVEC@0.109217,K562@1.50697,MCF7@0.536792,NHEK@0.144815,NHLF@0.075922,SKNSHRA@1.18651, 0 0 0 0 ENSG00000236200.1 ENST00000453015.1 chr1:44169066-44170417 2 645 704 exonic 8.52 0 0,1,1 0 0,0,0 190.705426356589 250.234375 305.507 208.803100775194 273.698863636364 305.242 170.48992248062 275.303977272727 295.109 0 0 cat,chimp,cow,dog,elephant,guinea_pig,horse,human,macaque,marmoset,mouse,orangutan,panda,rabbit,rat, antisense antisense A549@0.365859,AG04450@0.104951,BJ@0.0533465,GM12878@0.71439,H1HESC@0.487547,HELAS3@1.23015,HEPG2@0.779231,HMEC@0.136546,HSMM@0.0869595,HUVEC@0.109217,K562@1.50697,MCF7@0.536792,NHEK@0.144815,NHLF@0.075922,SKNSHRA@1.18651, 0 0 0 0 ENSG00000236200.1 ENST00000418149.1 chr1:44169985-44173001 2 414 2600 exonic 4.66 1 1,1,1 1 0,0,0 178.57729468599 136.712692307692 37.962 152.550724637681 143.607692307692 74.733 144.685990338164 133.536153846154 75.811 0 0 chimp,elephant,human,macaque,marmoset,orangutan,rabbit, antisense antisense A549@0.365859,AG04450@0.104951,BJ@0.0533465,GM12878@0.71439,H1HESC@0.487547,HELAS3@1.23015,HEPG2@0.779231,HMEC@0.136546,HSMM@0.0869595,HUVEC@0.109217,K562@1.50697,MCF7@0.536792,NHEK@0.144815,NHLF@0.075922,SKNSHRA@1.18651, 0 0 0 0 ENSG00000229444.1 ENST00000437753.1 chr1:44175063-44193014 4 465 17480 intronic -2.31 0 0,0,1 0 0,0,0 0 0.842105263157895 23.46 0 1.48512585812357 0 0 2.43094965675057 0 0 0 chimp,horse,human,macaque,marmoset,orangutan,panda, antisense antisense A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0.0087745,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000237950.1 ENST00000446167.1 chr1:44410042-44411974 2 484 1446 intergenic -2.67 1 0,0,1 0 0,0,0 0 21.6320885200553 61.495 0 22.7268326417704 189.589 0 23.6313969571231 138.354 0 0 chimp,horse,human,macaque,marmoset,orangutan,rabbit, antisense antisense A549@0.174885,AG04450@0.018818,BJ@0.02009,GM12878@0.657991,H1HESC@0,HELAS3@0.186246,HEPG2@0.210613,HMEC@0.067401,HSMM@0.048398,HUVEC@0.0061235,K562@0.870057,MCF7@0.116487,NHEK@0.0986177,NHLF@0.0079405,SKNSHRA@0.163503, 0 0 0 0 ENSG00000237950.1 ENST00000445226.1 chr1:44410044-44411958 3 291 1619 intergenic -2.67 1 0,0,1 0 0,0,0 0 19.3205682520074 61.495 0 20.2983323038913 189.589 0 21.106238418777 138.07 0 0 chimp,horse,human,macaque,marmoset,orangutan, antisense antisense A549@0.174885,AG04450@0.018818,BJ@0.02009,GM12878@0.657991,H1HESC@0,HELAS3@0.186246,HEPG2@0.210613,HMEC@0.067401,HSMM@0.048398,HUVEC@0.0061235,K562@0.870057,MCF7@0.116487,NHEK@0.0986177,NHLF@0.0079405,SKNSHRA@0.163503, 0 0 0 0 ENSG00000237950.1 ENST00000412378.1 chr1:44410046-44412223 2 492 1683 intergenic 0 1 1,1,1 1 0,0,0 0 18.5858585858586 140.47 0 19.5264408793821 236.947 0 20.3036244800951 187.076 0 0 chimp,horse,human,macaque,marmoset,orangutan, antisense antisense A549@0.174885,AG04450@0.018818,BJ@0.02009,GM12878@0.657991,H1HESC@0,HELAS3@0.186246,HEPG2@0.210613,HMEC@0.067401,HSMM@0.048398,HUVEC@0.0061235,K562@0.870057,MCF7@0.116487,NHEK@0.0986177,NHLF@0.0079405,SKNSHRA@0.163503, 0 0 0 0 ENSG00000230615.1 ENST00000434244.1 chr1:44509600-44570647 7 2637 58398 intergenic 15.73 1 0,0,0 0 0,0,0 0 8.66498852700435 44.011 1.36518771331058 6.57942052810028 71.978 287.243079256731 11.3730093496353 71.52 0 0 chimp,cow,human,macaque,orangutan,panda, lincRNA processed_transcript A549@0.537469,AG04450@0.571111,BJ@0.809325,GM12878@0,H1HESC@0.009024,HELAS3@5.72677,HEPG2@1.99897,HMEC@0.05084,HSMM@0.0222935,HUVEC@0.0255315,K562@0.0495715,MCF7@0,NHEK@0.183153,NHLF@0.94673,SKNSHRA@0.296892, 0 0 0 0 ENSG00000230615.1 ENST00000431800.1 chr1:44514049-44542084 3 671 27360 intergenic -1.40 1 1,1,1 0 0,0,0 0 3.16929824561404 0 25.1326378539493 1.5422514619883 12.448 26.24739195231 2.96425438596491 12.649 0 0 chimp,human, lincRNA processed_transcript A549@0.537469,AG04450@0.571111,BJ@0.809325,GM12878@0,H1HESC@0.009024,HELAS3@5.72677,HEPG2@1.99897,HMEC@0.05084,HSMM@0.0222935,HUVEC@0.0255315,K562@0.0495715,MCF7@0,NHEK@0.183153,NHLF@0.94673,SKNSHRA@0.296892, 0 0 0 0 ENSG00000230615.1 ENST00000437643.1 chr1:44514064-44541950 4 610 27270 intergenic 3.70 0 0,1,1 0 0,0,0 0 3.17975797579758 0 0 1.54734140080675 12.448 0 2.97403740374037 12.649 0 0 chimp,elephant,human,macaque,orangutan, lincRNA processed_transcript A549@0.537469,AG04450@0.571111,BJ@0.809325,GM12878@0,H1HESC@0.009024,HELAS3@5.72677,HEPG2@1.99897,HMEC@0.05084,HSMM@0.0222935,HUVEC@0.0255315,K562@0.0495715,MCF7@0,NHEK@0.183153,NHLF@0.94673,SKNSHRA@0.296892, 0 0 0 0 ENSG00000230615.1 ENST00000453688.1 chr1:44516786-44541864 4 650 24422 intergenic -3.53 0 0,0,1 0 0,0,0 0 1.34698222913766 0 0 1.48701990009008 0 0 3.07190238309721 0 0 0 NA lincRNA processed_transcript A549@0.537469,AG04450@0.571111,BJ@0.809325,GM12878@0,H1HESC@0.009024,HELAS3@5.72677,HEPG2@1.99897,HMEC@0.05084,HSMM@0.0222935,HUVEC@0.0255315,K562@0.0495715,MCF7@0,NHEK@0.183153,NHLF@0.94673,SKNSHRA@0.296892, 0 0 0 0 ENSG00000230615.1 ENST00000447959.1 chr1:44516787-44542142 2 758 24595 intergenic 3.45 1 0,0,1 0 0,0,0 0 1.33750762350071 0 22.2480211081794 1.47656027647896 0 23.2348284960422 3.05029477536085 0 0 0 NA lincRNA processed_transcript A549@0.537469,AG04450@0.571111,BJ@0.809325,GM12878@0,H1HESC@0.009024,HELAS3@5.72677,HEPG2@1.99897,HMEC@0.05084,HSMM@0.0222935,HUVEC@0.0255315,K562@0.0495715,MCF7@0,NHEK@0.183153,NHLF@0.94673,SKNSHRA@0.296892, 0 0 0 0 ENSG00000233602.1 ENST00000414156.1 chr1:44709080-44709945 2 617 246 intronic 5.87 0 0,0,0 0 0,0,0 0 0 64.4 0 0 208.78 0 0 208.905 0 0 cat,chimp,cow,dog,elephant,horse,human,macaque,marmoset,orangutan,panda, sense_intronic sense_intronic A549@0.193903,AG04450@0.068088,BJ@0.237626,GM12878@0.14345,H1HESC@0.502482,HELAS3@0.34736,HEPG2@0.429266,HMEC@0.017683,HSMM@0.103038,HUVEC@0.283058,K562@0.22894,MCF7@2.13644,NHEK@0.461696,NHLF@0.421541,SKNSHRA@0.299963, 0 0 0 0 ENSG00000250809.1 ENST00000511004.1 chr1:44964642-44969005 2 4221 140 intronic 8.15 0 0,0,1 0 0,0,0 66.1092158256337 0 0 69.8872305140962 0 3.419 68.2783700544895 0 3.445 0 0 chimp,horse,human,marmoset,orangutan, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0.001965,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000225721.1 ENST00000440985.1 chr1:45224709-45227849 3 507 2629 exonic -0.63 0 0,0,1 0 0,0,0 111.047337278107 13.5458349182199 71.29 124.844181459566 77.7154811715481 99.159 142.520710059172 78.0848231266641 93.378 0 0 cat,chimp,cow,dog,elephant,guinea_pig,horse,human,macaque,marmoset,orangutan,panda,pig,rabbit,rat, antisense antisense A549@0.024058,AG04450@0.030269,BJ@0.014763,GM12878@0.024316,H1HESC@0,HELAS3@0.0605595,HEPG2@0.027761,HMEC@0.008029,HSMM@0.0418315,HUVEC@0.020524,K562@0,MCF7@0,NHEK@0.00509167,NHLF@0.0076515,SKNSHRA@0.0234225, 0 0 0 0 ENSG00000225721.1 ENST00000428791.1 chr1:45224796-45241482 3 577 16105 exonic -0.10 0 0,1,1 0 0,0,0 114.984402079723 8.6894132257063 143.674 154.261698440208 28.2157094070165 184.782 177.521663778163 26.9071716858118 195.881 0 0 cat,chimp,cow,guinea_pig,horse,human,marmoset,opossum,orangutan,panda,pig,rabbit,rat, antisense antisense A549@0.024058,AG04450@0.030269,BJ@0.014763,GM12878@0.024316,H1HESC@0,HELAS3@0.0605595,HEPG2@0.027761,HMEC@0.008029,HSMM@0.0418315,HUVEC@0.020524,K562@0,MCF7@0,NHEK@0.00509167,NHLF@0.0076515,SKNSHRA@0.0234225, 0 0 0 0 ENSG00000246279.1 ENST00000501044.1 chr1:45769863-45771290 2 1198 227 intergenic 3.84 0 1,1,1 0 0,0,0 0 0 0 1.19699499165275 0 0 1.25709515859766 0 0 1 1 chimp,human,macaque,marmoset,orangutan, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0.026705,H1HESC@0.012971,HELAS3@0,HEPG2@0.001654,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000230896.1 ENST00000430643.1 chr1:46160356-46162747 2 596 1793 intronic 0 0 0,0,1 0 0,0,0 16.5939597315436 0 0 49.9513422818792 10.4049079754601 3.107 51.6224832214765 10.978806469604 7.498 0 0 chimp,human,macaque,marmoset,orangutan, processed_transcript processed_transcript A549@0.315485,AG04450@0.697134,BJ@0.367627,GM12878@0.718874,H1HESC@0.016051,HELAS3@0.282585,HEPG2@0.135872,HMEC@0.117202,HSMM@0.138819,HUVEC@0.0750385,K562@0.448365,MCF7@0.221765,NHEK@0.300233,NHLF@0.205777,SKNSHRA@0.607675, 0 0 0 0 ENSG00000226957.1 ENST00000450004.1 chr1:46512490-46514040 2 647 901 intronic -1.97 0 0,0,0 0 0,0,0 0 0 130.534 11.9165378670788 0 207.296 14.7295208655332 0 199.323 0 0 chimp,human,orangutan, antisense antisense A549@0.0076005,AG04450@0.009937,BJ@0,GM12878@0.0199125,H1HESC@0,HELAS3@0.035002,HEPG2@0.017404,HMEC@0,HSMM@0.0031705,HUVEC@0.0087,K562@0,MCF7@0.025204,NHEK@0,NHLF@0.006013,SKNSHRA@0.0378585, 0 0 0 0 ENSG00000227857.1 ENST00000452785.1 chr1:46599043-46604753 3 356 5350 intronic -6.59 1 0,0,1 1 0,0,0 0 65.7654205607477 181.009 127.980337078652 122.705794392523 249.1 137.941011235955 119.558691588785 223.804 0 0 cat,chimp,cow,dog,horse,human,macaque,marmoset,orangutan,panda,pig,rabbit,rat, antisense antisense A549@0.0293855,AG04450@0.08146,BJ@0,GM12878@0.182123,H1HESC@0.031727,HELAS3@0.20685,HEPG2@0.0151965,HMEC@0,HSMM@0.0241625,HUVEC@0.039932,K562@0.077085,MCF7@0.335238,NHEK@0.0251343,NHLF@0.0216195,SKNSHRA@0.045444, 0 0 0 0 ENSG00000224863.1 ENST00000416581.1 chr1:46912345-46915376 3 1126 1901 intergenic 5.36 1 0,0,0 0 0,0,0 0 30.0804839558127 34.128 8.47957371225577 64.7369805365597 41 8.70159857904085 51.4786954234613 40.364 0 0 cat,chimp,cow,dog,horse,human,macaque,marmoset,orangutan,panda, lincRNA processed_transcript A549@0,AG04450@0.0104885,BJ@0.017198,GM12878@0,H1HESC@0,HELAS3@0.009403,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0.001781,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000225667.1 ENST00000455247.1 chr1:46921495-46948147 2 352 26298 intergenic 0 0 0,0,1 0 0,0,0 39.1392045454545 67.5791314928892 29.15 27.0227272727273 81.4418967221842 26.162 25.7130681818182 78.7497908586204 28.364 0 0 dog,human,orangutan, lincRNA lincRNA A549@0.046264,AG04450@0,BJ@0.043402,GM12878@0.0264855,H1HESC@0.0727595,HELAS3@0.443572,HEPG2@0.015411,HMEC@0,HSMM@0,HUVEC@0,K562@0.162211,MCF7@0.011616,NHEK@0.007459,NHLF@0.0110235,SKNSHRA@0.176305, 0 0 0 0 ENSG00000235894.1 ENST00000429472.1 chr1:47004368-47035926 8 2616 28928 exonic 1.75 1 0,0,1 0 0,0,0 160.441131498471 19.5274128871681 0 223.016055045872 31.7865389933628 0 197.490443425076 31.9692685287611 0 0 0 chimp,human,macaque,marmoset,orangutan, lincRNA processed_transcript A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0.0066295,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0.0231975,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000186118.6 ENST00000334122.4 chr1:47137500-47139266 2 864 900 intronic 21.85 1 0,0,0 0 0,0,1 124.494212962963 0 6.89 125.288194444444 4.22777777777778 11.812 117.819444444444 3.61 10.438 0 0 cat,chimp,cow,dog,elephant,guinea_pig,horse,human,macaque,marmoset,mouse,opossum,orangutan,panda,rabbit,rat, antisense antisense A549@0.0099635,AG04450@0,BJ@0.0027945,GM12878@0.0046555,H1HESC@0.0196255,HELAS3@0,HEPG2@0.0245065,HMEC@0,HSMM@0.0026325,HUVEC@0.011169,K562@0.0043395,MCF7@0.0116605,NHEK@0,NHLF@0,SKNSHRA@0.068878, 0 0 0 0 ENSG00000186118.6 ENST00000415500.1 chr1:47137531-47139148 2 564 1051 intronic 11.79 0 0,0,0 0 0,0,1 78.2765957446809 52.1712654614653 15.105 97.3421985815603 53.627973358706 12.944 97.1329787234042 46.9105613701237 11.594 0 0 cat,chimp,cow,dog,elephant,guinea_pig,horse,human,macaque,marmoset,mouse,orangutan,panda,rabbit,rat, antisense antisense A549@0.0099635,AG04450@0,BJ@0.0027945,GM12878@0.0046555,H1HESC@0.0196255,HELAS3@0,HEPG2@0.0245065,HMEC@0,HSMM@0.0026325,HUVEC@0.011169,K562@0.0043395,MCF7@0.0116605,NHEK@0,NHLF@0,SKNSHRA@0.068878, 0 0 0 0 ENSG00000228237.1 ENST00000442839.1 chr1:47139708-47157770 3 497 17561 exonic 0.19 1 0,0,0 0 0,0,0 75.9114688128773 87.3342064802688 22.08 79.2354124748491 89.2396788337794 52.796 77.0865191146881 83.0681054609646 50.656 0 0 chimp,cow,dog,elephant,guinea_pig,horse,human,macaque,marmoset,orangutan,pig,rabbit,rat, antisense antisense A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000228237.1 ENST00000418985.1 chr1:47139800-47157769 4 487 17476 exonic -0.67 1 0,0,0 0 0,0,0 49.0102669404517 87.7589837491417 13.86 80.8624229979466 89.6737239642939 37.933 68.1909650924025 83.4721332112612 41.852 0 0 chimp,cow,dog,elephant,guinea_pig,horse,human,macaque,marmoset,orangutan,panda,pig,rabbit, antisense antisense A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000225506.1 ENST00000444042.1 chr1:47643841-47644943 2 361 739 intergenic -2.88 0 0,1,0 1 0,0,0 0 0 0 0 2.5872801082544 5.792 0 2.63058186738836 5.776 0 0 cat,chimp,elephant,horse,human,macaque,marmoset,orangutan, lincRNA lincRNA A549@0.154443,AG04450@0.0376735,BJ@0.285291,GM12878@0.353204,H1HESC@0.973508,HELAS3@1.0111,HEPG2@0.346822,HMEC@0.169199,HSMM@0.0917505,HUVEC@0.168764,K562@0.663482,MCF7@0.331921,NHEK@0.34572,NHLF@0.096037,SKNSHRA@0.595166, 0 0 0 0 ENSG00000224805.1 ENST00000429328.1 chr1:47644922-47645829 2 477 428 intergenic 3.85 0 0,1,0 1 0,0,0 0 0 0 12.1425576519916 0 1.912 12.1090146750524 0 1.944 0 0 chimp,dog,human,macaque,marmoset,orangutan,panda,rabbit, antisense antisense A549@0.093696,AG04450@0.0098335,BJ@0.040943,GM12878@0.036632,H1HESC@0.0189935,HELAS3@0.246753,HEPG2@0.0962255,HMEC@0.102579,HSMM@0.0185725,HUVEC@0.0338675,K562@0.304465,MCF7@0.140008,NHEK@0.0354227,NHLF@0.0444465,SKNSHRA@0.166314, 0 0 0 0 ENSG00000226252.1 ENST00000422216.1 chr1:47691469-47696422 2 4034 917 exonic 6.56 1 0,1,0 0 0,0,0 48.5761031234507 0 112.78 61.9447198810114 12.5278080697928 130.084 54.9645513138324 13.3794983642312 155.855 0 0 cat,chimp,cow,horse,human,marmoset,orangutan,panda,pig, antisense antisense A549@0,AG04450@0.003065,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0.070776,K562@0.0415855,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000225762.1 ENST00000420876.1 chr1:47846600-47874149 3 480 27065 intergenic 1.83 0 0,0,0 0 0,0,0 0 11.4662109735821 29.401 3.61666666666667 16.9256604470719 17.121 3.66041666666667 15.9724736744873 25.452 0 0 cat,chimp,cow,dog,horse,human,macaque,marmoset,orangutan,panda,pig, antisense antisense A549@0.196896,AG04450@0.019033,BJ@0.0707525,GM12878@0.008347,H1HESC@0,HELAS3@0.424297,HEPG2@0,HMEC@0.025432,HSMM@0.0576785,HUVEC@0,K562@0.005543,MCF7@0.827865,NHEK@0.00273333,NHLF@0.076172,SKNSHRA@0, 0 0 0 0 ENSG00000237424.1 ENST00000445551.1 chr1:47897805-47900313 1 2508 0 intergenic 7.03 1 0,0,1 0 0,0,0 0 0 0 6.82974481658692 0 0 6.48524720893142 0 0 0 0 chimp,horse,human,macaque,marmoset,orangutan,panda, antisense antisense A549@0.448632,AG04450@0.196674,BJ@0.425326,GM12878@0.735874,H1HESC@0.096854,HELAS3@0.743189,HEPG2@0.660047,HMEC@0.554288,HSMM@0.394105,HUVEC@0.335722,K562@1.84377,MCF7@0.433673,NHEK@0.267899,NHLF@0.471313,SKNSHRA@0.041593, 0 0 0 0 ENSG00000227947.1 ENST00000454285.1 chr1:48154135-48169055 3 812 14104 intergenic 2.79 0 0,0,0 0 0,0,0 230.189655172414 34.620533182076 293.171 134.371921182266 45.136911514464 328.371 143.368226600985 47.3540839478162 320.822 0 0 cat,chimp,cow,dog,elephant,guinea_pig,human,macaque,marmoset,mouse,orangutan,panda,rabbit,rat, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0.0223265,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0.006553,K562@0,MCF7@0.0430525,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000223814.1 ENST00000438589.1 chr1:48226804-48231219 2 405 4008 intergenic 0 0 0,0,0 0 0,0,1 0 32.0678642714571 67.971 66.8716049382716 44.1729041916168 122.929 70.3827160493827 44.2287924151697 131.422 0 0 cat,chimp,cow,dog,guinea_pig,horse,human,macaque,marmoset,orangutan,panda,pig,rabbit, lincRNA lincRNA A549@0.013573,AG04450@0,BJ@0,GM12878@0,H1HESC@0.0865475,HELAS3@0.093467,HEPG2@0,HMEC@0.193149,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0.031987,NHLF@0,SKNSHRA@0.0279115, 0 0 0 0 ENSG00000204018.5 ENST00000371865.3 chr1:48231308-48267295 5 1153 34826 intergenic 56.23 1 0,1,1 0 0,0,1 257.487424111015 11.0490438178372 21.5 343.921075455334 14.3070120025268 0.239 347.863833477884 13.7275024407052 1.911 0 0 cat,chimp,cow,dog,elephant,guinea_pig,horse,human,macaque,marmoset,mouse,opossum,orangutan,panda,pig,rabbit,rat, lincRNA lincRNA A549@0.0165615,AG04450@0.0167075,BJ@0,GM12878@0,H1HESC@1.02056,HELAS3@0.280349,HEPG2@0.160726,HMEC@0.137902,HSMM@0.013588,HUVEC@0,K562@0,MCF7@0.091002,NHEK@0.276265,NHLF@0.098071,SKNSHRA@0.0533705, 0 0 0 0 ENSG00000225028.1 ENST00000445070.1 chr1:48283738-48285909 2 1805 364 intergenic 0.44 0 0,1,0 0 0,0,0 81.4714681440443 0 78.806 83.0626038781163 0 82.653 72.3252077562327 0 80.3 0 0 chimp,human,macaque,marmoset,orangutan, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0.067509,HEPG2@0.0925755,HMEC@0,HSMM@0.002523,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000226133.1 ENST00000456803.1 chr1:48519217-48522448 4 509 2716 intergenic -1.95 0 0,0,0 0 0,0,0 0 0 117.117 0 0 95.516 0 0 87.941 0 0 chimp,human,macaque,marmoset,orangutan, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0.015569,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000226133.1 ENST00000439795.1 chr1:48519881-48532873 3 786 12202 intergenic -1.70 0 0,1,0 0 0,0,0 45.8854961832061 46.7871660383544 0 120.165394402036 58.3232257007048 0 118.075063613232 55.7288149483691 0 0 0 cat,chimp,cow,dog,elephant,horse,human,macaque,marmoset,orangutan,panda, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0.015569,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000231413.1 ENST00000455238.1 chr1:48544459-48547868 2 290 3117 intergenic -3.60 0 0,1,0 0 0,0,0 0 20.2117420596728 0 0 14.3593198588386 13.776 0 15.915944818736 25.542 0 0 chimp,human,macaque,marmoset,orangutan, lincRNA lincRNA A549@0.021261,AG04450@0,BJ@0,GM12878@0,H1HESC@0.0101775,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000215889.4 ENST00000452503.1 chr1:48567387-48627543 5 640 59508 intergenic 0 0 0,0,1 0 0,0,0 0 0 0 0 1.61185050749479 5.1 0 1.76428379377563 6.71 0 0 chimp,elephant,human,macaque,orangutan, lincRNA lincRNA A549@0.005229,AG04450@0,BJ@0,GM12878@0,H1HESC@0.0496815,HELAS3@0.164042,HEPG2@0.0338325,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0.0597583,NHLF@0,SKNSHRA@0.129892, 0 0 0 0 ENSG00000223720.1 ENST00000431986.1 chr1:48671637-48672515 3 267 607 intergenic 0 0 0,1,1 0 0,0,0 0 0 0 0 0 0 0 0 0 0 0 chimp,human,macaque,marmoset,orangutan, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0.0098295,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000229846.1 ENST00000456002.1 chr1:49513988-49653257 3 710 138555 intronic 2.20 0 0,0,1 0 0,0,0 162.149295774648 10.9368698350835 0 248.59014084507 16.6106239399516 7.624 228.485915492958 19.5693118256288 9.165 0 0 cat,chimp,cow,dog,elephant,horse,human,macaque,marmoset,mouse,orangutan,panda,pig,rabbit,rat, antisense antisense A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0.0031875, 0 0 0 0 ENSG00000230114.1 ENST00000420071.1 chr1:49723083-49734957 4 562 11306 intronic -3.91 0 0,0,0 0 0,0,0 53.6992882562278 4.35379444542721 0 8.93060498220641 3.39377321776048 0 9.37900355871886 3.5819034141164 0 0 0 chimp,horse,human,macaque,marmoset,orangutan, antisense antisense A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000225623.1 ENST00000457061.1 chr1:49839873-49937757 4 510 97368 intronic -4.13 0 0,0,1 0 0,0,0 0 11.9140271957933 0 0 16.4198504642182 0 0 20.8126283789335 0 0 0 chimp,human,macaque,marmoset,orangutan,rabbit, sense_intronic sense_intronic A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000237337.1 ENST00000442477.1 chr1:50639978-50641540 2 856 704 intronic -1.70 0 0,0,0 0 0,0,0 404.978971962617 28.5511363636364 231.259 158.377336448598 106.244318181818 297.942 162.158878504673 93.9829545454545 287.669 0 0 cat,chimp,cow,dog,elephant,guinea_pig,horse,human,macaque,marmoset,mouse,orangutan,panda,rabbit,rat, antisense antisense A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000233407.1 ENST00000440897.1 chr1:50671756-50688799 2 248 16793 intergenic 0 0 0,0,0 0 0,0,0 325.451612903226 30.5572559995236 72.96 234.653225806452 35.0984934198773 56.609 176.584677419355 34.7417971773953 62.175 0 0 cat,chimp,cow,dog,elephant,guinea_pig,horse,human,macaque,marmoset,mouse,orangutan,panda,rabbit,rat, antisense antisense A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000225767.1 ENST00000424664.1 chr1:50927141-50936822 5 498 9175 intronic -1.77 0 0,1,0 0 0,0,0 0 8.98049046321526 0 0 13.9176021798365 1.984 8.29518072289157 18.4923160762943 2.072 0 0 chimp,human,macaque,marmoset,orangutan,panda, antisense antisense A549@0,AG04450@0,BJ@0.007113,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000203356.2 ENST00000366181.2 chr1:51660767-51700768 2 2364 37635 intergenic 2.09 0 0,0,0 0 0,0,0 0 3.15427129002259 26.37 0 8.2809884416102 6.784 0 11.7551481333865 7.034 0 0 chimp,human,macaque,marmoset,orangutan, lincRNA processed_transcript A549@0.003147,AG04450@0.006692,BJ@0.004109,GM12878@0,H1HESC@0.0038865,HELAS3@0.0049065,HEPG2@0.008466,HMEC@0.001731,HSMM@0.0397715,HUVEC@0.0063965,K562@0,MCF7@0.002549,NHEK@0.00918733,NHLF@0.0008155,SKNSHRA@0.002882, 0 0 0 0 ENSG00000236434.1 ENST00000422306.1 chr1:51730588-51731705 2 391 724 intronic -17.78 0 0,0,0 0 0,0,0 0 0 146.224 0 0 195.134 0 0 190.859 0 0 chimp,human,macaque,marmoset,orangutan, antisense antisense A549@0.088343,AG04450@0.047531,BJ@0.280763,GM12878@0.070938,H1HESC@0,HELAS3@0.082662,HEPG2@0.0413725,HMEC@0,HSMM@0,HUVEC@0.288598,K562@0.0085405,MCF7@0,NHEK@0.0446007,NHLF@0,SKNSHRA@0.125034, 0 0 0 0 ENSG00000230272.1 ENST00000453573.1 chr1:51731525-51732716 2 577 612 intronic 0 0 0,0,0 0 0,0,0 0 0 0 0 0 2.976 179.852686308492 9.52777777777778 3.18 0 0 chimp,human,macaque,marmoset,orangutan, antisense antisense A549@0.0577915,AG04450@0.105223,BJ@0.090684,GM12878@0.346037,H1HESC@0.424374,HELAS3@0.29387,HEPG2@0.165611,HMEC@0.008427,HSMM@0.115773,HUVEC@0.240107,K562@0.320879,MCF7@0.048047,NHEK@0.161775,NHLF@0.0107045,SKNSHRA@0.140718, 1 96 0 0 ENSG00000228298.1 ENST00000413652.1 chr1:51795326-51800996 3 809 4857 exonic 0.93 0 0,1,0 0 0,0,0 0 15.3407453160387 6.688 8.47095179233622 34.3458925262508 21.603 14.6526576019778 38.4051883878938 28.579 0 0 cat,chimp,elephant,guinea_pig,human,macaque,marmoset,mouse,orangutan,panda,pig,rabbit, antisense ambiguous_orf A549@0.0094155,AG04450@0,BJ@0.007444,GM12878@0,H1HESC@0.01953,HELAS3@0.030918,HEPG2@0.0692515,HMEC@0,HSMM@0,HUVEC@0,K562@0.0079445,MCF7@2.4725,NHEK@0,NHLF@0,SKNSHRA@0.0109625, 0 0 0 0 ENSG00000228298.1 ENST00000453829.1 chr1:51795422-51796953 3 551 976 exonic -7.55 0 0,1,1 0 0,0,0 0 0 6.688 0 107.525614754098 28.787 9.08166969147005 105.389344262295 35.831 0 0 chimp,cow,elephant,human,macaque,marmoset,orangutan,panda,pig, antisense ambiguous_orf A549@0.0094155,AG04450@0,BJ@0.007444,GM12878@0,H1HESC@0.01953,HELAS3@0.030918,HEPG2@0.0692515,HMEC@0,HSMM@0,HUVEC@0,K562@0.0079445,MCF7@2.4725,NHEK@0,NHLF@0,SKNSHRA@0.0109625, 0 0 0 0 ENSG00000238140.1 ENST00000424246.1 chr1:51927393-51929088 2 676 1017 intronic -8.03 0 0,1,1 0 0,0,0 0 0 26.27 0 8.52507374631268 43.016 0 8.84955752212389 61.473 0 0 chimp,horse,human,macaque,marmoset,orangutan,pig, antisense antisense A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000227070.1 ENST00000415031.1 chr1:51983981-52026633 2 253 42397 intronic 0 0 0,1,0 0 0,0,0 0 7.92324928650612 40.863 0 18.4449371417789 33.988 0 19.8382668585041 35.948 0 0 cow,human, antisense antisense A549@0,AG04450@0,BJ@0,GM12878@0.0502435,H1HESC@0,HELAS3@0.0320565,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0.735778,MCF7@0.0614695,NHEK@0.0255047,NHLF@0,SKNSHRA@0.02181, 0 0 0 0 ENSG00000227070.1 ENST00000426017.1 chr1:51984055-52027301 3 359 42883 intronic 0 0 1,1,1 0 0,0,0 0 7.83345381619756 32.259 0 18.2358976750694 27.508 97.7715877437326 19.6134365599422 28.934 0 0 chimp,elephant,horse,human,macaque,marmoset,orangutan, antisense ambiguous_orf A549@0,AG04450@0,BJ@0,GM12878@0.0502435,H1HESC@0,HELAS3@0.0320565,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0.735778,MCF7@0.0614695,NHEK@0.0255047,NHLF@0,SKNSHRA@0.02181, 0 0 0 0 ENSG00000231730.1 ENST00000416072.1 chr1:52259721-52264173 2 571 3879 exonic 5.20 1 0,0,0 0 0,0,0 182.626970227671 26.2887342098479 0 173.07880910683 29.0922918277907 0 169.824868651489 27.8847641144625 0 0 0 chimp,cow,dog,elephant,guinea_pig,horse,human,macaque,marmoset,mouse,orangutan,pig, antisense antisense A549@0.3627,AG04450@0.132778,BJ@0.21333,GM12878@0.253192,H1HESC@0.073645,HELAS3@0.50074,HEPG2@0.680473,HMEC@0.114335,HSMM@0.078121,HUVEC@0.845476,K562@0.100373,MCF7@0.654119,NHEK@0.200321,NHLF@0.0980325,SKNSHRA@0.506014, 0 0 0 0 ENSG00000223390.1 ENST00000425802.1 chr1:52499063-52509951 2 760 10126 exonic 27.91 0 0,1,0 0 0,0,0 79.8710526315789 6.99140825597472 187.91 135.738157894737 9.39196128777405 163.663 147.196052631579 10.0802883665811 170.288 0 0 cat,chimp,cow,dog,elephant,guinea_pig,human,marmoset,mouse,opossum,orangutan,panda,pig,rabbit,rat, antisense antisense A549@0.0217985,AG04450@0.053866,BJ@0.067464,GM12878@0.0810725,H1HESC@0.163301,HELAS3@0.100363,HEPG2@0.0761955,HMEC@0.042988,HSMM@0.0631925,HUVEC@0.109315,K562@0.026192,MCF7@0.089313,NHEK@0.0343757,NHLF@0.0610565,SKNSHRA@0.0783115, 0 0 0 0 ENSG00000232993.1 ENST00000447867.1 chr1:53535610-53551174 2 465 15097 exonic 0 0 0,1,0 0 0,0,0 80.7677419354839 56.8717626018414 12.987 130.941935483871 62.7556468172485 8.687 116.550537634409 67.265416970259 2.554 0 0 cat,chimp,cow,dog,elephant,guinea_pig,horse,human,macaque,marmoset,orangutan,panda,pig,rabbit, processed_transcript processed_transcript A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000235563.1 ENST00000439621.1 chr1:53580248-53584281 2 1869 2162 exonic 14.44 0 0,0,1 0 0,0,0 82.1187800963082 17.613783533765 0 86.4975922953451 5.17483811285846 0 96.6741573033708 7.36308973172988 0 0 0 chimp,human, antisense antisense A549@0.0497995,AG04450@0.0451555,BJ@0.230931,GM12878@0,H1HESC@0.002645,HELAS3@0.004914,HEPG2@0.0886255,HMEC@0,HSMM@0.0024365,HUVEC@0,K562@0,MCF7@0.004298,NHEK@0,NHLF@0.031031,SKNSHRA@0, 0 0 0 0 ENSG00000236723.1 ENST00000452466.1 chr1:53676128-53679447 2 522 2795 exonic 3.90 0 0,0,0 0 0,0,0 289.298850574713 101.547048300537 45.098 219.63601532567 106.786404293381 70.094 239.950191570881 110.398211091234 76.378 0 0 cat,chimp,cow,elephant,guinea_pig,horse,human,macaque,marmoset,mouse,opossum,orangutan,panda,pig,rabbit,rat, antisense antisense A549@0.419368,AG04450@0.41438,BJ@0.590792,GM12878@0.806583,H1HESC@1.37104,HELAS3@1.50796,HEPG2@1.56857,HMEC@0.312567,HSMM@0.567301,HUVEC@0.45459,K562@1.34975,MCF7@0.939303,NHEK@0.538762,NHLF@0.791278,SKNSHRA@1.01781, 0 0 0 0 ENSG00000226754.1 ENST00000458151.1 chr1:53704282-53708455 3 1178 2991 intergenic 5.69 1 1,1,1 0 0,0,0 2.75042444821732 10.4998328318288 30.167 56.3692699490662 17.7830157138081 59.189 47.2444821731749 17.3323303243063 58.064 0 0 cat,chimp,dog,horse,human,macaque,marmoset,orangutan,panda, lincRNA processed_transcript A549@0.836977,AG04450@0.670812,BJ@1.05151,GM12878@0.752985,H1HESC@0.414662,HELAS3@1.41183,HEPG2@0.962671,HMEC@0.52353,HSMM@0.621071,HUVEC@0.502866,K562@0.337201,MCF7@1.06164,NHEK@0.518043,NHLF@0.783993,SKNSHRA@1.72181, 0 0 0 0 ENSG00000234578.1 ENST00000432653.1 chr1:53733607-53734273 2 468 196 intronic -5.24 1 0,0,0 0 0,0,0 0 0 0 8.42948717948718 0 0 8.71794871794872 0 0 0 0 cat,chimp,cow,dog,guinea_pig,horse,human,macaque,marmoset,orangutan,pig, antisense antisense A549@0.041981,AG04450@0.0274425,BJ@0,GM12878@0.031249,H1HESC@0.05823,HELAS3@0.0240375,HEPG2@0.0092585,HMEC@0,HSMM@0,HUVEC@0.012664,K562@0.021479,MCF7@0.0171105,NHEK@0,NHLF@0,SKNSHRA@0.028989, 0 0 0 0 ENSG00000228838.1 ENST00000421637.1 chr1:53753696-53755378 2 673 1007 exonic 0.19 0 0,1,0 0 0,0,0 79.9435364041605 104.291956305859 33.402 99.408618127786 87.1221449851043 25.638 104.569093610698 89.4488579940417 25.91 0 0 chimp,cow,dog,elephant,guinea_pig,horse,human,macaque,marmoset,orangutan,panda,pig,rat, antisense antisense A549@0,AG04450@0.009554,BJ@0,GM12878@0,H1HESC@0.0044025,HELAS3@0.0034625,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0.0103555,K562@0,MCF7@0.005198,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000225030.1 ENST00000450469.1 chr1:53757463-53757810 2 235 110 intronic -1.94 0 0,1,1 0 0,0,0 0 0 0 0 0 0 0 0 0 0 0 chimp,human,macaque,marmoset,orangutan, sense_intronic sense_intronic A549@0,AG04450@0,BJ@0,GM12878@0.036006,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000232762.1 ENST00000446686.1 chr1:53770208-53773134 6 746 2170 intronic 3.27 0 0,0,0 0 0,0,0 0 6.78341013824885 277.912 1.99463806970509 9.13410138248848 248.466 2.08310991957105 10.947465437788 231.553 0 0 chimp,human,macaque,marmoset,orangutan, antisense antisense A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000225675.1 ENST00000445039.1 chr1:53793921-53802890 3 323 8642 intergenic 0 0 0,1,0 1 0,0,0 0 6.09638972460079 0 8.35913312693499 10.8934274473502 189.535 31.6315789473684 13.2838463318676 189.095 0 0 cat,chimp,horse,human,macaque,marmoset,orangutan, lincRNA processed_transcript A549@0.094532,AG04450@0.0886595,BJ@0.015104,GM12878@0.023351,H1HESC@0.140685,HELAS3@0.120063,HEPG2@0.10576,HMEC@0.01256,HSMM@0,HUVEC@0,K562@0.0071225,MCF7@0.065395,NHEK@0.0234947,NHLF@0.023808,SKNSHRA@0.227506, 0 0 0 0 ENSG00000226938.1 ENST00000429099.1 chr1:53814160-53814905 2 381 362 intergenic -1.88 0 0,0,0 0 0,0,0 0 0 12.98 8.46194225721785 0 18.571 8.83727034120735 0 20.967 0 0 chimp,human,macaque,marmoset,orangutan, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0.0069335,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000230138.1 ENST00000449958.1 chr1:53832340-53833917 2 848 727 intergenic 3.78 0 0,0,1 0 0,0,0 0 0 0 0 3.94497936726272 1.84 0 4.01100412654745 1.944 0 0 cat,chimp,cow,horse,human,macaque,marmoset,panda,pig, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0.828825,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0.0120785,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0.122912, 0 0 0 0 ENSG00000245332.1 ENST00000501525.1 chr1:54447917-54452234 3 2242 2071 intergenic 9.00 0 0,1,0 0 0,0,0 9.71454058876004 0 0 11.2600356824264 0 0 12.2756467439786 0 0 0 0 NA lincRNA lincRNA A549@0.006009,AG04450@0.0116815,BJ@0.007664,GM12878@0,H1HESC@0.0026475,HELAS3@0.005578,HEPG2@0.0057345,HMEC@0,HSMM@0.004409,HUVEC@0.002651,K562@0.026467,MCF7@0,NHEK@0.002054,NHLF@0.0017385,SKNSHRA@0.0049545, 0 0 0 0 ENSG00000231581.1 ENST00000422758.1 chr1:54690181-54691156 2 388 585 intergenic -1.38 0 0,1,0 0 0,0,0 136.154639175258 0 215.192 134.458762886598 0 221.814 135.412371134021 0 228.769 0 0 chimp,human,macaque,marmoset,mouse,orangutan,rabbit, antisense antisense A549@0.021484,AG04450@0.0474065,BJ@0,GM12878@0.089127,H1HESC@0.091125,HELAS3@0.034004,HEPG2@0.027977,HMEC@0,HSMM@0,HUVEC@0.031617,K562@0.157699,MCF7@0.010544,NHEK@0.0931217,NHLF@0.0198455,SKNSHRA@0.0547695, 0 0 0 0 ENSG00000225632.1 ENST00000426901.1 chr1:54751078-54753044 2 1109 855 intronic 2.60 0 0,1,1 0 0,0,0 0 0 0 17.3588818755636 55.9964912280702 0 28.0901713255185 56.4771929824561 2.43 0 0 chimp,cow,elephant,horse,human,macaque,marmoset,orangutan, antisense antisense A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0.022097,HMEC@0,HSMM@0,HUVEC@0,K562@0.00418,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000232245.1 ENST00000447150.1 chr1:54881929-54886533 2 287 4315 intergenic -0.68 0 0,0,1 0 0,0,0 22.4668989547038 1.03453070683662 20.584 42.7595818815331 6.19351100811124 23.49 42.0348432055749 9.80254924681344 23.085 0 0 cat,chimp,elephant,human,macaque,marmoset,orangutan,panda, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000235741.1 ENST00000433377.1 chr1:54982085-54982932 2 681 164 intergenic -5.78 1 0,0,1 0 0,0,0 0 0 137.298 5.82672540381791 0 115.196 6.08516886930984 0 117.864 0 0 chimp,cow,dog,elephant,horse,human,macaque,marmoset,orangutan,panda, lincRNA lincRNA A549@0.008088,AG04450@0,BJ@0,GM12878@0,H1HESC@0.007246,HELAS3@0,HEPG2@0,HMEC@0.005995,HSMM@0,HUVEC@0,K562@0,MCF7@0.0030105,NHEK@0.0535643,NHLF@0.00565,SKNSHRA@0, 0 0 0 0 ENSG00000230728.1 ENST00000416119.1 chr1:55087150-55094111 2 621 6338 intronic 3.00 0 0,0,1 0 0,0,0 0 0 0 0 3.56263805616914 0 0 3.62732723256548 0 0 0 chimp,human,macaque,marmoset,orangutan, processed_transcript processed_transcript A549@0,AG04450@0,BJ@0,GM12878@0.0165105,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000237453.1 ENST00000450503.1 chr1:55258558-55260578 2 341 1677 intronic 1.47 1 0,1,0 0 0,0,0 26.633431085044 0 20.128 34.1026392961877 3.06917113893858 59.034 34.6950146627566 3.20989862850328 58.54 0 0 cat,chimp,cow,dog,elephant,horse,human,macaque,panda, antisense antisense A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0.008107, 0 0 0 0 ENSG00000242396.1 ENST00000415336.1 chr1:55352548-55353674 2 573 551 exonic 12.17 0 0,1,0 1 0,0,0 64.1431064572426 51.3248638838475 11.837 253.668411867365 85.7422867513612 24.857 271.319371727749 81.2032667876588 25.424 0 0 cat,chimp,cow,horse,human,macaque,orangutan, antisense antisense A549@0.008239,AG04450@0.0428615,BJ@0.0220415,GM12878@0.248832,H1HESC@0.0738865,HELAS3@0.172448,HEPG2@0.180166,HMEC@0.366579,HSMM@0.0366665,HUVEC@0.0389795,K562@0.316214,MCF7@0.0467845,NHEK@0.153313,NHLF@0.0746315,SKNSHRA@0.0293055, 150 2 0 0 ENSG00000233203.2 ENST00000443284.1 chr1:55353236-55354391 2 438 715 intergenic -2.34 0 0,1,1 0 0,0,0 0 0 68.118 0 0 192.596 0 0 200.209 0 0 chimp,cow,human,macaque,marmoset,orangutan, antisense antisense A549@0.034336,AG04450@0.0693685,BJ@0.0960875,GM12878@0.201686,H1HESC@0.0495855,HELAS3@0.07205,HEPG2@0.0736965,HMEC@0.01466,HSMM@0.000739,HUVEC@0,K562@0.176044,MCF7@0.0417725,NHEK@0.049354,NHLF@0.0189145,SKNSHRA@0.0262875, 0 0 0 0 ENSG00000233203.2 ENST00000436033.1 chr1:55353400-55354336 2 412 522 intergenic -0.81 0 0,0,1 0 0,0,0 0 0 68.118 0 0 192.596 0 0 200.209 0 0 chimp,human,macaque,marmoset,orangutan,panda, antisense antisense A549@0.034336,AG04450@0.0693685,BJ@0.0960875,GM12878@0.201686,H1HESC@0.0495855,HELAS3@0.07205,HEPG2@0.0736965,HMEC@0.01466,HSMM@0.000739,HUVEC@0,K562@0.176044,MCF7@0.0417725,NHEK@0.049354,NHLF@0.0189145,SKNSHRA@0.0262875, 0 0 0 0 ENSG00000233203.2 ENST00000455380.1 chr1:55353401-55354523 3 512 606 intergenic -2.34 0 0,0,1 0 0,0,0 0 0 68.118 0 0 192.596 0 0 200.209 0 0 chimp,dog,human,macaque,marmoset,orangutan,panda, antisense antisense A549@0.034336,AG04450@0.0693685,BJ@0.0960875,GM12878@0.201686,H1HESC@0.0495855,HELAS3@0.07205,HEPG2@0.0736965,HMEC@0.01466,HSMM@0.000739,HUVEC@0,K562@0.176044,MCF7@0.0417725,NHEK@0.049354,NHLF@0.0189145,SKNSHRA@0.0262875, 150 2 0 0 ENSG00000233203.2 ENST00000433690.1 chr1:55353405-55354523 2 401 715 intergenic -2.34 0 0,0,1 0 0,0,0 0 0 68.118 0 0 192.596 0 0 200.209 0 0 chimp,cow,dog,human,macaque,marmoset,orangutan,panda, antisense antisense A549@0.034336,AG04450@0.0693685,BJ@0.0960875,GM12878@0.201686,H1HESC@0.0495855,HELAS3@0.07205,HEPG2@0.0736965,HMEC@0.01466,HSMM@0.000739,HUVEC@0,K562@0.176044,MCF7@0.0417725,NHEK@0.049354,NHLF@0.0189145,SKNSHRA@0.0262875, 0 0 0 0 ENSG00000233271.1 ENST00000436960.1 chr1:55446623-55457947 2 426 10896 exonic 0 0 0,1,1 0 0,0,0 0 1.31607929515419 0 9.50469483568075 8.05837004405286 5.719 10.2089201877934 8.82645007342144 5.875 0 0 cat,chimp,cow,dog,elephant,human,macaque,marmoset,orangutan,panda, antisense antisense A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0.012402,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000244861.1 ENST00000499090.1 chr1:55681081-55683124 2 1792 249 intergenic -1.27 0 0,1,0 0 0,0,0 0 0 121.41 10.6255580357143 0 259.235 6.97600446428571 0 330.488 1 1 chimp,human,macaque,marmoset,orangutan, lincRNA lincRNA A549@0.17255,AG04450@0.108715,BJ@0.053986,GM12878@0.26218,H1HESC@0.313321,HELAS3@0.229369,HEPG2@0.306098,HMEC@0.068472,HSMM@0.232231,HUVEC@0.29189,K562@0.412049,MCF7@0.332578,NHEK@0.149899,NHLF@0.151691,SKNSHRA@0.264413, 0 0 0 0 ENSG00000231090.1 ENST00000451250.1 chr1:55683534-55699850 2 636 15678 intergenic -9.58 1 0,0,0 0 0,0,0 36.3867924528302 5.78096696007144 68.229 29.7279874213836 14.3763235106519 83.992 37.6069182389937 38.6900114810562 85.456 0 0 cat,chimp,cow,dog,elephant,horse,human,macaque,marmoset,mouse,orangutan,panda,pig, processed_transcript processed_transcript A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0.0045615,HELAS3@0.020206,HEPG2@0.013143,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000234810.1 ENST00000422374.1 chr1:56046710-56200675 3 4060 149901 intergenic 3.84 0 0,0,1 0 0,0,0 5.14285714285714 15.5985150199131 20.52 0.733004926108374 17.7994276222307 3.864 0.829310344827586 18.691883309651 3.976 0 0 elephant,human,macaque,marmoset, lincRNA lincRNA A549@0.018923,AG04450@0.0724365,BJ@0.01561,GM12878@0,H1HESC@0.0029255,HELAS3@0,HEPG2@0.002142,HMEC@0.122843,HSMM@0.166219,HUVEC@0,K562@0.0092255,MCF7@0.0030365,NHEK@0.012758,NHLF@0.050521,SKNSHRA@0.0437325, 0 0 0 0 ENSG00000233147.1 ENST00000424357.1 chr1:56289480-56333921 5 640 43793 intergenic 1.89 0 0,0,0 0 0,0,0 0 0.546754047450506 83.3 0 3.91482657045647 129.468 0 4.05229146210582 116.811 0 0 chimp,human,macaque,marmoset,orangutan, lincRNA lincRNA A549@0,AG04450@0.015544,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0.02824,HUVEC@0,K562@0,MCF7@0,NHEK@0.001979,NHLF@0.0089745,SKNSHRA@0.0035235, 0 0 0 0 ENSG00000230250.1 ENST00000458145.1 chr1:56381282-56410636 3 628 28722 intergenic 2.55 1 0,0,0 0 0,0,0 0 5.90655246849105 201.718 0 9.27129030011837 149.325 0 10.6057725785112 147.485 0 0 cat,chimp,cow,horse,human,macaque,marmoset,orangutan,panda,pig,rabbit, processed_transcript processed_transcript A549@0,AG04450@0,BJ@0,GM12878@0.117029,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0.00617467,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000233079.1 ENST00000455010.1 chr1:56410760-56415792 2 451 4579 intergenic -0.77 1 0,0,1 0 0,0,0 0 86.4369949770692 0 0 68.471281939288 0 0 68.4675693382835 2.187 0 0 chimp,human,macaque,orangutan, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000235612.1 ENST00000435828.1 chr1:56611393-56620896 3 728 8771 intergenic 2.04 0 0,0,0 0 0,0,0 35.2582417582418 35.7767643370197 0 97.6112637362637 37.7189602097822 0 95.6758241758242 34.3263025880743 0 0 0 chimp,cow,dog,horse,human,macaque,marmoset,panda,pig,rabbit, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000223956.1 ENST00000451914.1 chr1:56880635-56881638 4 541 456 intergenic 0 1 1,1,1 0 0,0,0 0 0 0 0 0 19.735 6.28835489833641 0 21.029 0 0 horse,human,macaque,marmoset,orangutan,rabbit, lincRNA lincRNA A549@0.0329475,AG04450@0,BJ@0,GM12878@0.008602,H1HESC@0,HELAS3@0.153811,HEPG2@1.22947,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0.119469,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000229913.1 ENST00000425435.1 chr1:57289352-57292593 2 1822 1417 intergenic 1.08 1 0,0,1 0 0,0,0 27.4429198682766 0 0 23.1103183315038 8.08680310515173 12.763 24.1750823271131 8.83980239943543 15.07 0 0 chimp,human,macaque,marmoset,orangutan, antisense antisense A549@0,AG04450@0,BJ@0.007846,GM12878@0,H1HESC@0,HELAS3@0.004577,HEPG2@0.01285,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000236341.1 ENST00000417420.1 chr1:57429559-57462430 4 606 32259 exonic 0.03 0 0,1,1 0 0,0,0 0 25.9144734802691 183.75 23.3795379537954 32.9676989367308 144.127 24.8811881188119 31.6144951796398 136.805 0 0 chimp,cow,horse,human,macaque,marmoset,orangutan, antisense antisense A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0.0040565,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000231229.1 ENST00000441502.1 chr1:57457023-57480373 4 1933 21411 intronic 1.52 1 0,0,0 0 0,0,0 0 86.6162720097146 0 5.47490946714951 104.969034608379 1.578 5.68442834971547 102.010882256784 1.632 0 0 chimp,horse,human,macaque,marmoset,orangutan, antisense antisense A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0.0011,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0.00199967,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000227935.1 ENST00000422038.1 chr1:57852248-57853122 2 706 166 intronic -2.95 0 0,0,0 0 0,0,0 0 0 11.76 0 0 19.741 0 0 19.866 0 0 chimp,horse,human,macaque,marmoset,orangutan, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000226759.1 ENST00000416598.1 chr1:58326215-58328786 2 1148 1421 intronic 2.55 0 0,0,0 0 0,0,0 41.0209059233449 0 0 73.1254355400697 0 10.46 69.5862369337979 0 10.551 0 0 cat,chimp,cow,dog,elephant,guinea_pig,horse,human,macaque,marmoset,orangutan,panda, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0.0043005,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000226759.1 ENST00000432897.1 chr1:58326253-58333170 4 687 6224 intronic 2.20 0 0,0,0 0 0,0,0 68.54730713246 8.510764781491 0 116.091703056769 18.9219151670951 17.6 106.496360989811 21.8349935732648 17.674 0 0 chimp,human,macaque,marmoset,orangutan,panda, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0.0043005,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000226759.1 ENST00000434141.1 chr1:58326260-58328735 2 891 1582 intronic 2.55 0 0,0,0 0 0,0,0 52.8529741863075 0 0 81.7115600448934 1.92414664981037 18.652 76.9876543209877 2.08091024020228 18.646 0 0 cat,chimp,dog,elephant,guinea_pig,horse,human,macaque,marmoset,orangutan,panda, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0.0043005,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000226759.1 ENST00000420811.1 chr1:58326309-58328308 2 469 1528 intronic -0.22 0 0,0,1 0 0,0,0 100.409381663113 0 0 157.663113006397 0 20.884 151.373134328358 0 19.861 0 0 cat,chimp,cow,dog,elephant,guinea_pig,horse,human,macaque,marmoset,orangutan,panda, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0.0043005,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000230363.1 ENST00000457412.1 chr1:58343974-58346412 2 395 2041 intronic -4.85 0 0,0,0 0 0,0,0 0 0 0 0 9.5360117589417 0 0 7.33953944145027 0 0 0 chimp,cow,dog,elephant,guinea_pig,horse,human,macaque,marmoset,orangutan,panda,pig, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000235038.1 ENST00000419596.1 chr1:58525811-58545946 5 615 19512 intronic 7.49 1 0,0,0 0 0,0,0 0 14.6762505125051 0 10.9853658536585 15.3539360393604 0 11.2146341463415 15.5842045920459 0 0 0 chimp,dog,human,macaque,marmoset,orangutan,panda, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0.0047935,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000234807.3 ENST00000544621.1 chr1:59250823-59365384 3 991 113566 intergenic 2.29 0 0,1,0 0 0,0,0 100.419778002018 19.3094147896377 114.833 161.980827447023 20.3016836024867 129.718 161.18668012109 20.431881020728 125.402 0 0 cat,chimp,cow,dog,elephant,guinea_pig,horse,human,macaque,marmoset,mouse,orangutan,panda,pig,rabbit,rat, lincRNA processed_transcript A549@0.000955,AG04450@0.039035,BJ@0.0394445,GM12878@0.0368425,H1HESC@0,HELAS3@0.0282,HEPG2@0.013685,HMEC@0,HSMM@0.039457,HUVEC@0.0575915,K562@0.0257575,MCF7@0.091366,NHEK@0.0258743,NHLF@0.0140805,SKNSHRA@0.0905885, 0 0 0 0 ENSG00000234807.3 ENST00000419531.1 chr1:59250832-59366668 5 2268 113560 intergenic 10.79 0 0,1,0 0 0,0,0 54.6058201058201 19.3104350123283 110.234 77.5970017636684 20.3027562522015 127.594 78.0983245149912 20.4329605494893 122.909 0 0 cat,chimp,dog,horse,human,macaque,marmoset,orangutan,panda,pig, lincRNA processed_transcript A549@0.000955,AG04450@0.039035,BJ@0.0394445,GM12878@0.0368425,H1HESC@0,HELAS3@0.0282,HEPG2@0.013685,HMEC@0,HSMM@0.039457,HUVEC@0.0575915,K562@0.0257575,MCF7@0.091366,NHEK@0.0258743,NHLF@0.0140805,SKNSHRA@0.0905885, 0 0 0 0 ENSG00000231740.1 ENST00000424592.1 chr1:59304120-59316926 3 392 12410 intergenic -7.98 0 0,0,1 0 0,0,0 0 23.6454472199839 0 0 36.3942788074134 0 4.19642857142857 33.5568090249799 0 0 0 chimp,cow,dog,elephant,horse,human,macaque,marmoset,orangutan,panda,pig, lincRNA lincRNA A549@0,AG04450@0,BJ@0.018116,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0.0124355,MCF7@0,NHEK@0.0175107,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000232453.1 ENST00000423408.1 chr1:59348540-59362337 4 1207 12584 intergenic 5.95 1 1,1,1 1 0,0,0 0 27.9235537190083 72.176 5.52112676056338 18.5123966942149 54.844 6.70173985086993 19.8201684678957 65.816 0 0 cat,chimp,dog,elephant,horse,human,macaque,marmoset,orangutan,panda, lincRNA lincRNA A549@0.194932,AG04450@0.109944,BJ@0.114248,GM12878@0.014644,H1HESC@0.0383375,HELAS3@0.06751,HEPG2@0.137368,HMEC@0.196109,HSMM@0.624273,HUVEC@0.442159,K562@0.047792,MCF7@0.0302975,NHEK@0.293018,NHLF@0.137813,SKNSHRA@0.124599, 0 0 0 0 ENSG00000232453.1 ENST00000427292.1 chr1:59361517-59362375 2 217 639 intergenic 0 0 0,1,1 1 0,0,0 0 0 72.176 0 0 55.149 0 0 66.125 0 0 chimp,cow,human,macaque,marmoset,orangutan,rabbit, lincRNA lincRNA A549@0.194932,AG04450@0.109944,BJ@0.114248,GM12878@0.014644,H1HESC@0.0383375,HELAS3@0.06751,HEPG2@0.137368,HMEC@0.196109,HSMM@0.624273,HUVEC@0.442159,K562@0.047792,MCF7@0.0302975,NHEK@0.293018,NHLF@0.137813,SKNSHRA@0.124599, 0 0 0 0 ENSG00000230812.1 ENST00000447329.1 chr1:59486059-59498735 3 527 12145 intergenic -0.29 0 0,1,0 0 0,0,0 0 0.619514203375875 0 0 6.56541786743516 7.064 0 8.54359818855496 7.359 0 0 chimp,horse,human,macaque,marmoset,orangutan, lincRNA lincRNA A549@0.008191,AG04450@0.187575,BJ@0.040611,GM12878@0.549886,H1HESC@0,HELAS3@0.0432185,HEPG2@0,HMEC@0,HSMM@0.175932,HUVEC@0.0438375,K562@0.019371,MCF7@0,NHEK@0.0291443,NHLF@0.200375,SKNSHRA@0.192278, 0 0 0 0 ENSG00000230812.1 ENST00000438195.1 chr1:59486260-59510286 4 302 23718 intergenic 0 0 0,1,0 0 0,0,0 0 1.49641622396492 0 0 6.22463951429294 7.064 0 6.97993085420356 7.359 0 0 chimp,human,macaque,marmoset,orangutan, lincRNA lincRNA A549@0.008191,AG04450@0.187575,BJ@0.040611,GM12878@0.549886,H1HESC@0,HELAS3@0.0432185,HEPG2@0,HMEC@0,HSMM@0.175932,HUVEC@0.0438375,K562@0.019371,MCF7@0,NHEK@0.0291443,NHLF@0.200375,SKNSHRA@0.192278, 0 0 0 0 ENSG00000230812.1 ENST00000424308.1 chr1:59486271-59488692 3 149 2268 intergenic 0 0 0,0,0 0 0,0,0 0 0 0 0 2.21296296296296 7.064 0 4.46693121693122 7.359 0 0 chimp,human,macaque,marmoset,orangutan, lincRNA lincRNA A549@0.008191,AG04450@0.187575,BJ@0.040611,GM12878@0.549886,H1HESC@0,HELAS3@0.0432185,HEPG2@0,HMEC@0,HSMM@0.175932,HUVEC@0.0438375,K562@0.019371,MCF7@0,NHEK@0.0291443,NHLF@0.200375,SKNSHRA@0.192278, 0 0 0 0 ENSG00000241042.1 ENST00000422198.1 chr1:59520069-59521721 2 169 1481 intergenic 0 0 0,0,1 0 0,0,0 0 0 0 0 11.4294395678596 2.893 0 14.40918298447 2.992 0 0 NA lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000235215.2 ENST00000451090.1 chr1:59521671-59543788 3 314 21799 intergenic 5.68 0 0,0,1 0 0,0,0 23.0095541401274 3.21716592504243 120.785 0 9.20216523693748 43.315 6.19108280254777 9.39001789072893 48.175 0 0 cat,chimp,dog,human,macaque,marmoset,orangutan,panda, lincRNA lincRNA A549@0,AG04450@0.014141,BJ@0,GM12878@0,H1HESC@0.0826265,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000237352.1 ENST00000449812.1 chr1:59522315-59553867 4 619 30927 intergenic -2.53 0 0,1,0 0 0,0,0 13.6995153473344 18.5632618747373 0 15.048465266559 19.7839751673295 0 14.9741518578352 21.4961683965467 0 0 0 chimp,cow,dog,elephant,horse,human,macaque,marmoset,orangutan,panda,pig,rabbit, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000224609.1 ENST00000425914.1 chr1:59597608-59612399 3 960 13827 intergenic -3.88 1 0,0,0 0 0,0,0 146.608333333333 21.0574238808129 6.688 100.346875 18.0856295653432 3.78 92.0510416666666 16.1983799811962 3.808 0 0 chimp,cow,dog,elephant,guinea_pig,human,macaque,marmoset,mouse,orangutan,panda,pig, lincRNA processed_transcript A549@0.0051225,AG04450@0.005378,BJ@0.002513,GM12878@0,H1HESC@0.0063395,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0.009008,HUVEC@0,K562@0,MCF7@0.00427,NHEK@0,NHLF@0.0100405,SKNSHRA@0.007072, 0 0 0 0 ENSG00000224609.1 ENST00000436225.1 chr1:59598186-59664293 3 769 65334 intergenic -3.88 0 0,0,1 0 0,0,0 206.366710013004 16.4961428965011 27.835 210.107932379714 16.4246181161417 42.426 200.079323797139 15.8238742461812 40.753 0 0 chimp,elephant,guinea_pig,horse,human,mouse,opossum,orangutan,panda,pig,rat, lincRNA processed_transcript A549@0.0051225,AG04450@0.005378,BJ@0.002513,GM12878@0,H1HESC@0.0063395,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0.009008,HUVEC@0,K562@0,MCF7@0.00427,NHEK@0,NHLF@0.0100405,SKNSHRA@0.007072, 0 0 0 0 ENSG00000226883.1 ENST00000443012.1 chr1:60220419-60254854 2 765 33668 intronic 0.40 0 0,0,0 0 0,0,0 107.694117647059 7.88190566710229 0 97.0287581699346 11.5516217179518 0 97.3437908496732 12.5608292740882 0 0 0 NA antisense antisense A549@0,AG04450@0,BJ@0,GM12878@0.012224,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0.006885,NHLF@0,SKNSHRA@0.002963, 0 0 0 0 ENSG00000231816.1 ENST00000424725.1 chr1:60238467-60254520 3 544 15505 intergenic -3.47 0 0,1,1 0 0,0,0 0 0.890035472428249 42.545 0 6.11370525636891 40.473 0 5.92099322799097 44.48 0 0 chimp,human,macaque,orangutan,panda,rabbit, lincRNA lincRNA A549@0.0079365,AG04450@0.04787,BJ@0.017696,GM12878@0.048137,H1HESC@0.0439715,HELAS3@0.0473305,HEPG2@0.223834,HMEC@0.007486,HSMM@0.03131,HUVEC@0.00889,K562@0.035908,MCF7@0.015035,NHEK@0.004827,NHLF@0,SKNSHRA@0.0708845, 0 0 0 0 ENSG00000238242.1 ENST00000456878.1 chr1:60580547-60615351 3 680 34120 intergenic 0 0 0,0,0 0 0,0,0 0 12.9725087924971 17.442 3.45882352941176 15.7826494724502 27.384 3.52941176470588 14.7527256740914 28.488 0 0 chimp,cow,dog,elephant,human,macaque,marmoset,mouse,orangutan,panda,rabbit, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0.002857,SKNSHRA@0, 0 0 0 0 ENSG00000226476.1 ENST00000439156.1 chr1:61005921-61106163 8 1788 98440 intergenic 3.91 0 0,1,0 0 0,0,0 14.9043624161074 24.6699309223893 0 30.1325503355705 27.9905526208858 0 28.1627516778523 29.2140390085331 0 0 0 chimp,human,macaque,marmoset,orangutan, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0.196181,HELAS3@0.0029555,HEPG2@0,HMEC@0,HSMM@0.0076035,HUVEC@0.0511015,K562@0.628099,MCF7@0.239007,NHEK@0.0233173,NHLF@0,SKNSHRA@0.380209, 0 0 0 0 ENSG00000231252.1 ENST00000423403.1 chr1:61125303-61291256 6 2338 163605 intergenic 2.13 0 0,0,0 0 0,0,0 12.5278015397776 16.8877784908774 0 10.6347305389222 16.6059655878488 2.39 11.3806672369547 17.4803031692185 2.43 0 0 chimp,elephant,human,macaque,orangutan, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0.0146705,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0.001945,HUVEC@0.069409,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0.636661, 0 0 0 0 ENSG00000237928.1 ENST00000438559.1 chr1:61405911-61436448 7 1268 29257 intronic 0.75 0 0,0,1 0 0,0,0 13.3564668769716 35.7222203233414 78.146 22.7334384858044 39.5042212120176 72.972 26.1805993690852 41.9739207710975 75.379 0 0 chimp,human,macaque,marmoset,orangutan,panda, antisense antisense A549@0,AG04450@0,BJ@0,GM12878@0.002625,H1HESC@0.0320535,HELAS3@0.0257265,HEPG2@0,HMEC@0,HSMM@0.212468,HUVEC@0.0354935,K562@0.003198,MCF7@0,NHEK@0,NHLF@0.005421,SKNSHRA@0.160054, 0 0 0 0 ENSG00000237928.1 ENST00000418662.1 chr1:61406067-61418521 3 646 11804 intronic 5.60 0 0,0,0 0 0,0,0 168.343653250774 7.0796340223653 253.048 116.877708978328 28.6275838698746 245.498 126.643962848297 31.9444256184344 261.13 0 0 chimp,dog,elephant,human,macaque,marmoset,orangutan,panda, antisense antisense A549@0,AG04450@0,BJ@0,GM12878@0.002625,H1HESC@0.0320535,HELAS3@0.0257265,HEPG2@0,HMEC@0,HSMM@0.212468,HUVEC@0.0354935,K562@0.003198,MCF7@0,NHEK@0,NHLF@0.005421,SKNSHRA@0.160054, 0 0 0 0 ENSG00000237928.1 ENST00000421455.1 chr1:61419726-61436417 4 764 15921 intronic 0.28 0 0,0,0 0 0,0,0 30.2722513089005 37.159977388355 80.202 0 32.7311098549086 77.786 0 33.704164311287 80.134 0 0 chimp,dog,human,macaque,marmoset,orangutan, antisense antisense A549@0,AG04450@0,BJ@0,GM12878@0.002625,H1HESC@0.0320535,HELAS3@0.0257265,HEPG2@0,HMEC@0,HSMM@0.212468,HUVEC@0.0354935,K562@0.003198,MCF7@0,NHEK@0,NHLF@0.005421,SKNSHRA@0.160054, 0 0 0 0 ENSG00000237853.1 ENST00000442027.1 chr1:61714617-61719182 4 380 4179 intronic -3.14 0 0,0,0 0 0,0,0 88.9052631578947 50.1902368987796 134.42 92.9552631578947 57.8322565206987 133.72 103.123684210526 53.3555874611151 137.18 0 0 cat,chimp,dog,elephant,guinea_pig,horse,human,macaque,marmoset,orangutan,pig,rabbit,rat, antisense antisense A549@0.016958,AG04450@0,BJ@0,GM12878@0,H1HESC@0.0464345,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0.039057,MCF7@0,NHEK@0.0135247,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000225771.1 ENST00000416342.1 chr1:62580420-62584681 2 427 3832 intronic -8.76 0 0,0,1 0 0,0,0 0 46.5762004175365 0 0.5807962529274 60.8601252609603 0 0.620608899297424 60.7074634655532 0 0 0 chimp,human,macaque,marmoset,orangutan, antisense antisense A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0.024416,NHLF@0,SKNSHRA@0.021173, 0 0 0 0 ENSG00000235545.1 ENST00000453229.1 chr1:63154153-63176365 2 1226 20984 intergenic -5.31 1 1,1,1 1 0,0,0 4.19249592169657 4.77292222645825 30.069 2.42740619902121 5.18623713305375 93.835 2.53507340946166 6.01239039268014 96.213 0 0 chimp,cow,elephant,horse,human,macaque,marmoset,orangutan, antisense antisense A549@0.0336865,AG04450@0.144548,BJ@0.244252,GM12878@0.48661,H1HESC@0.544158,HELAS3@0.392219,HEPG2@2.44667,HMEC@0.016672,HSMM@0.075762,HUVEC@0.0570275,K562@0.322149,MCF7@0.05797,NHEK@0.0458883,NHLF@0.06933,SKNSHRA@0.348168, 0 0 0 0 ENSG00000234318.1 ENST00000450811.1 chr1:63361680-63367310 2 445 5183 intergenic -0.55 0 0,0,1 0 0,0,0 0 92.6490449546595 0 0 85.6098784487749 1.912 0 91.5147597916265 1.944 0 0 chimp,dog,human,macaque,marmoset,orangutan,panda, lincRNA lincRNA A549@0.0823595,AG04450@0.0388835,BJ@0.043686,GM12878@0.0750925,H1HESC@0,HELAS3@0.005055,HEPG2@0.0610235,HMEC@0,HSMM@0.0403005,HUVEC@0.016853,K562@0.048745,MCF7@0.018195,NHEK@0.00589367,NHLF@0.00873,SKNSHRA@0.105359, 0 0 0 0 ENSG00000229537.1 ENST00000420285.1 chr1:63466168-63476596 2 353 10073 intergenic 7.40 1 0,0,0 0 0,0,0 279.815864022663 80.7561798868262 305.828 344.212464589235 89.0631390846818 305.911 318 93.695820510275 270.518 0 0 cat,chimp,cow,dog,elephant,guinea_pig,horse,human,macaque,marmoset,mouse,orangutan,panda,pig,platypus,rabbit,rat, lincRNA lincRNA A549@0,AG04450@0,BJ@0.0100785,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0.0154095, 0 0 0 0 ENSG00000229537.1 ENST00000425352.1 chr1:63466168-63476939 2 488 10281 intergenic 7.40 1 0,0,0 0 0,0,0 431.399590163934 79.8390234412995 185.484 477.770491803279 87.2612586324287 238.204 409.559426229508 92.2427779398891 214.104 0 0 cat,chimp,cow,dog,guinea_pig,horse,human,macaque,marmoset,mouse,orangutan,panda,pig,platypus,rabbit,rat, lincRNA lincRNA A549@0,AG04450@0,BJ@0.0100785,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0.0154095, 0 0 0 0 ENSG00000229537.1 ENST00000420659.1 chr1:63466168-63478142 2 443 11529 intergenic 7.40 1 0,0,0 0 0,0,0 222.968397291196 97.0843091334895 0 277.916478555305 109.122820712985 0 253.395033860045 109.401595975367 0 0 0 chimp,cow,dog,elephant,horse,human,macaque,marmoset,orangutan,panda,rabbit, lincRNA lincRNA A549@0,AG04450@0,BJ@0.0100785,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0.0154095, 0 0 0 0 ENSG00000227485.1 ENST00000418091.1 chr1:63489878-63491329 2 357 1092 intergenic -0.13 1 0,0,0 0 0,0,0 109.316526610644 4.63369963369963 87.932 132.364145658263 7.39010989010989 122.075 147.879551820728 13.5347985347985 131.178 0 0 cat,chimp,cow,dog,elephant,horse,human,macaque,marmoset,orangutan,panda,pig,rabbit, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000229225.1 ENST00000427547.1 chr1:63543752-63544702 2 155 793 intergenic 0 0 0,0,0 0 0,0,0 0 0 11.96 0 6.83228247162673 64.32 0 7.01765447667087 75.829 0 0 chimp,cow,human,macaque,marmoset,orangutan,pig, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000203605.3 ENST00000455038.1 chr1:63604921-63628824 3 820 23079 intergenic 4.95 0 0,0,0 0 0,0,0 64.119512195122 33.0050262143074 0 162.35243902439 41.5482473244075 2.151 157.998780487805 41.834481563326 2.259 0 0 cat,chimp,cow,elephant,horse,human,macaque,marmoset,mouse,opossum,orangutan,rabbit,rat, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0.007222,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000224209.1 ENST00000432537.1 chr1:63624707-63626081 2 483 889 intergenic 1.44 0 0,1,0 0 0,0,0 166.285714285714 45.1721034870641 0 250.790890269151 66.8042744656918 1.736 253.739130434783 57.5163104611924 1.813 0 0 cat,chimp,dog,human,macaque,marmoset,orangutan,panda, lincRNA processed_transcript A549@0.0055285,AG04450@0,BJ@0,GM12878@0.0027265,H1HESC@0.0436155,HELAS3@0.0641785,HEPG2@0,HMEC@0.01016,HSMM@0,HUVEC@0,K562@0.008596,MCF7@0.0052625,NHEK@0,NHLF@0,SKNSHRA@0.004678, 0 0 0 0 ENSG00000224209.1 ENST00000447183.1 chr1:63624754-63782901 12 1781 156344 intergenic 1.44 1 0,0,0 0 0,0,0 95.3374508702976 32.0622345596889 306.825 106.251544076362 41.8199419229392 368.843 151.599663110612 47.0202182367088 324.031 0 0 chimp,human,macaque,marmoset,orangutan, lincRNA processed_transcript A549@0.0055285,AG04450@0,BJ@0,GM12878@0.0027265,H1HESC@0.0436155,HELAS3@0.0641785,HEPG2@0,HMEC@0.01016,HSMM@0,HUVEC@0,K562@0.008596,MCF7@0.0052625,NHEK@0,NHLF@0,SKNSHRA@0.004678, 0 0 0 0 ENSG00000224209.1 ENST00000455304.1 chr1:63655660-63664594 2 742 8190 intergenic -1.63 0 0,0,0 0 0,0,0 132.816711590297 16.3188034188034 334.289 114.400269541779 25.9570207570208 360.404 196.001347708895 26.81221001221 359.214 0 0 chimp,cow,dog,horse,human,macaque,marmoset,orangutan,panda,rabbit, lincRNA processed_transcript A549@0.0055285,AG04450@0,BJ@0,GM12878@0.0027265,H1HESC@0.0436155,HELAS3@0.0641785,HEPG2@0,HMEC@0.01016,HSMM@0,HUVEC@0,K562@0.008596,MCF7@0.0052625,NHEK@0,NHLF@0,SKNSHRA@0.004678, 0 0 0 0 ENSG00000224209.1 ENST00000418086.1 chr1:63688556-63727475 2 401 38516 intergenic -11.00 0 0,0,0 0 0,0,0 0 26.7412244262125 38.17 22.6832917705736 36.9974036763942 49.482 17.5137157107232 43.4795928964586 258.325 0 0 cat,chimp,cow,dog,elephant,horse,human,macaque,marmoset,orangutan,panda,rabbit, lincRNA processed_transcript A549@0.0055285,AG04450@0,BJ@0,GM12878@0.0027265,H1HESC@0.0436155,HELAS3@0.0641785,HEPG2@0,HMEC@0.01016,HSMM@0,HUVEC@0,K562@0.008596,MCF7@0.0052625,NHEK@0,NHLF@0,SKNSHRA@0.004678, 0 0 0 0 ENSG00000228734.1 ENST00000449140.1 chr1:63715694-63717442 2 752 994 intergenic 2.58 0 0,0,0 0 0,0,0 0 0 0 0 0 3.224 0 0 3.263 0 0 chimp,human,macaque,marmoset,orangutan, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000224209.1 ENST00000436475.1 chr1:63722778-63782902 7 967 59145 intergenic -3.60 0 0,0,0 0 0,0,0 200.18304033092 39.2611040662778 307.386 290.879007238883 45.6672246174655 369.569 354.328852119959 50.037501056725 324.786 0 0 cat,chimp,cow,elephant,guinea_pig,horse,human,macaque,marmoset,mouse,orangutan,panda,rabbit,rat, lincRNA processed_transcript A549@0.0055285,AG04450@0,BJ@0,GM12878@0.0027265,H1HESC@0.0436155,HELAS3@0.0641785,HEPG2@0,HMEC@0.01016,HSMM@0,HUVEC@0,K562@0.008596,MCF7@0.0052625,NHEK@0,NHLF@0,SKNSHRA@0.004678, 0 0 0 0 ENSG00000230798.1 ENST00000426393.1 chr1:63786555-63787200 2 468 175 intergenic 3.50 1 1,1,1 0 0,0,0 0 0 51.888 0 11.04 130.53 0 10.36 179.371 0 0 cat,chimp,dog,elephant,human,macaque,marmoset,orangutan,panda,rabbit, antisense antisense A549@0.290392,AG04450@0.005011,BJ@0,GM12878@0.002142,H1HESC@7.89306,HELAS3@0.031919,HEPG2@0.0046245,HMEC@0,HSMM@0.0085455,HUVEC@0.015222,K562@0.383114,MCF7@0.314417,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000230798.1 ENST00000418244.1 chr1:63786555-63788107 4 937 609 intergenic 6.74 1 1,1,1 1 0,0,0 0 0 486.864 68.4311632870864 32.6732348111658 350.92 110.178228388474 35.3908045977011 363.586 0 0 chimp,dog,elephant,human,macaque,marmoset,orangutan, antisense antisense A549@0.290392,AG04450@0.005011,BJ@0,GM12878@0.002142,H1HESC@7.89306,HELAS3@0.031919,HEPG2@0.0046245,HMEC@0,HSMM@0.0085455,HUVEC@0.015222,K562@0.383114,MCF7@0.314417,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000230798.1 ENST00000449386.1 chr1:63786555-63788129 3 544 1026 intergenic -5.75 1 1,1,1 1 0,0,0 22.3235294117647 0 474.72 34.0183823529412 74.7261208576998 356.068 53.0477941176471 106.38693957115 368.756 0 0 chimp,dog,elephant,horse,human,macaque,marmoset,orangutan,panda,rat, antisense antisense A549@0.290392,AG04450@0.005011,BJ@0,GM12878@0.002142,H1HESC@7.89306,HELAS3@0.031919,HEPG2@0.0046245,HMEC@0,HSMM@0.0085455,HUVEC@0.015222,K562@0.383114,MCF7@0.314417,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000230798.1 ENST00000431294.1 chr1:63786555-63789253 3 493 2201 exonic 12.62 1 0,0,1 1 0,0,0 101.336713995943 225.193548387097 310.734 133.085192697769 215.393457519309 487.469 150.251521298174 241.971830985915 630.337 0 0 cat,chimp,dog,elephant,human,macaque,marmoset,orangutan,panda,rabbit, antisense antisense A549@0.290392,AG04450@0.005011,BJ@0,GM12878@0.002142,H1HESC@7.89306,HELAS3@0.031919,HEPG2@0.0046245,HMEC@0,HSMM@0.0085455,HUVEC@0.015222,K562@0.383114,MCF7@0.314417,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000230798.1 ENST00000427268.1 chr1:63786555-63790112 3 488 3065 exonic 8.15 1 0,1,1 0 0,0,0 0 279.752691680261 167 87.9385245901639 315.778792822186 299.862 113.491803278689 377.383360522023 309.934 0 0 cat,chimp,dog,elephant,human,macaque,marmoset,orangutan,panda, antisense antisense A549@0.290392,AG04450@0.005011,BJ@0,GM12878@0.002142,H1HESC@7.89306,HELAS3@0.031919,HEPG2@0.0046245,HMEC@0,HSMM@0.0085455,HUVEC@0.015222,K562@0.383114,MCF7@0.314417,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000223949.1 ENST00000412349.1 chr1:64560125-64577888 6 1568 16185 intronic 0.73 1 0,0,0 0 0,0,0 59.7391581632653 14.9492122335496 0 38.8137755102041 15.8196478220575 0 39.3367346938776 15.96484399135 0 0 0 chimp,human,macaque,orangutan, antisense antisense A549@0,AG04450@0.005223,BJ@0.001564,GM12878@0.0211975,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0.011223,HSMM@0.00979,HUVEC@0,K562@0,MCF7@0,NHEK@0.00351933,NHLF@0.0079525,SKNSHRA@3.71481, 0 0 0 0 ENSG00000223949.1 ENST00000424995.1 chr1:64571005-64636980 5 2184 63783 intronic 0.75 1 0,1,0 0 0,0,0 0 31.0656758070332 0 0 38.6013984917611 3.156 0 38.8460718373234 3.264 0 0 cat,chimp,cow,dog,elephant,horse,human,macaque,marmoset,orangutan,panda,pig,rabbit, antisense antisense A549@0,AG04450@0.005223,BJ@0.001564,GM12878@0.0211975,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0.011223,HSMM@0.00979,HUVEC@0,K562@0,MCF7@0,NHEK@0.00351933,NHLF@0.0079525,SKNSHRA@3.71481, 73 2 0 0 ENSG00000226891.1 ENST00000447748.1 chr1:65437908-65458695 4 2800 17981 intergenic -0.63 0 0,0,0 0 0,0,0 0 2.02925310049497 0 0 6.38029030643457 0 0 41.9630165174351 0 0 0 chimp,human,macaque,orangutan, lincRNA processed_transcript A549@0.081782,AG04450@0.024253,BJ@0.032005,GM12878@0,H1HESC@0.166829,HELAS3@0.0433865,HEPG2@0.0383725,HMEC@0,HSMM@0.0154905,HUVEC@0.225641,K562@0.382385,MCF7@0.210776,NHEK@0.005874,NHLF@0.005819,SKNSHRA@0.312484, 0 0 0 0 ENSG00000226891.1 ENST00000444349.1 chr1:65445260-65457087 4 377 11444 intergenic -1.22 0 0,0,1 0 0,0,0 0 1.59559594547361 0 0 6.31614819993009 0 6.3262599469496 61.8583537224746 0 0 0 cow,horse,human,marmoset,orangutan,rabbit, lincRNA processed_transcript A549@0.081782,AG04450@0.024253,BJ@0.032005,GM12878@0,H1HESC@0.166829,HELAS3@0.0433865,HEPG2@0.0383725,HMEC@0,HSMM@0.0154905,HUVEC@0.225641,K562@0.382385,MCF7@0.210776,NHEK@0.005874,NHLF@0.005819,SKNSHRA@0.312484, 0 0 0 0 ENSG00000226891.1 ENST00000415842.1 chr1:65445260-65468159 6 1151 21738 intergenic 2.68 0 0,1,1 0 0,0,0 0 0.84000368019137 0 3.52997393570808 6.54098813138283 10.063 8.51867940920938 35.6917839727666 10.252 0 0 chimp,cow,human,macaque,marmoset,orangutan, lincRNA processed_transcript A549@0.081782,AG04450@0.024253,BJ@0.032005,GM12878@0,H1HESC@0.166829,HELAS3@0.0433865,HEPG2@0.0383725,HMEC@0,HSMM@0.0154905,HUVEC@0.225641,K562@0.382385,MCF7@0.210776,NHEK@0.005874,NHLF@0.005819,SKNSHRA@0.312484, 0 0 0 0 ENSG00000226891.1 ENST00000436350.1 chr1:65458602-65468123 3 798 8719 intergenic -0.90 0 0,1,0 0 0,0,0 0 0 0 0 8.48365638261269 10.063 0 8.61520816607409 10.252 0 0 cat,chimp,dog,horse,human,marmoset,orangutan, lincRNA processed_transcript A549@0.081782,AG04450@0.024253,BJ@0.032005,GM12878@0,H1HESC@0.166829,HELAS3@0.0433865,HEPG2@0.0383725,HMEC@0,HSMM@0.0154905,HUVEC@0.225641,K562@0.382385,MCF7@0.210776,NHEK@0.005874,NHLF@0.005819,SKNSHRA@0.312484, 0 0 0 0 ENSG00000231485.1 ENST00000448344.1 chr1:65532310-65533420 2 308 800 intergenic 0 0 0,1,1 1 0,0,0 190.863636363636 46.1 48.24 463.837662337662 99.22375 102.599 460.938311688312 112.35875 79.317 0 0 chimp,elephant,human,macaque,marmoset,mouse,opossum,orangutan,panda,pig,rat, lincRNA lincRNA A549@0.0248835,AG04450@0.039322,BJ@0.0115415,GM12878@0,H1HESC@0.025865,HELAS3@0.034245,HEPG2@0.071697,HMEC@0,HSMM@0,HUVEC@0.015687,K562@0.0167155,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0.053985, 0 0 0 0 ENSG00000229294.1 ENST00000435739.1 chr1:65745139-65772204 2 510 26553 intronic -4.29 0 0,0,0 0 0,0,0 0 0.337814936165405 0 0 1.72040824012353 22.041 0 4.57567883101721 22.836 0 0 chimp,human,macaque,marmoset,orangutan, processed_transcript processed_transcript A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000237852.1 ENST00000429871.1 chr1:65952089-65959871 2 421 7359 intronic -18.02 1 1,1,1 0 0,0,0 74.2232779097387 3.67305340399511 0 91.5558194774347 7.55632558771572 12.797 83.4465558194774 8.92974588938715 17.77 0 0 cat,chimp,cow,dog,elephant,guinea_pig,horse,human,macaque,marmoset,mouse,opossum,orangutan,panda,pig,rabbit, sense_intronic sense_intronic A549@0.043092,AG04450@0.030615,BJ@0,GM12878@0.084213,H1HESC@0.0215575,HELAS3@0.064012,HEPG2@0.006733,HMEC@0,HSMM@0.027388,HUVEC@0.032283,K562@0.144464,MCF7@0.01757,NHEK@0.113705,NHLF@0.006113,SKNSHRA@0.0466995, 0 0 0 0 ENSG00000227466.1 ENST00000424138.1 chr1:66508183-66516401 3 453 7761 intronic -3.08 0 0,0,0 0 0,0,0 0 14.4294549671434 0 0 20.4697848215436 0 0 21.9786110037366 0 0 0 chimp,cow,dog,elephant,human,macaque,marmoset,orangutan,pig,rabbit, antisense antisense A549@0.0136145,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000227787.1 ENST00000448074.1 chr1:67240729-67241261 2 358 172 intronic 4.41 0 0,0,0 0 0,0,0 0 0 0 0 0 0 0 0 0 0 0 chimp,human,macaque,marmoset,orangutan, processed_transcript processed_transcript A549@0,AG04450@0.015493,BJ@0.0170575,GM12878@0,H1HESC@0.0597835,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0.126583,K562@0,MCF7@0,NHEK@0,NHLF@0.001629,SKNSHRA@0.0074715, 0 0 0 0 ENSG00000231080.1 ENST00000456389.1 chr1:67292625-67294241 2 859 755 exonic -4.07 0 0,0,1 0 0,0,0 98.6181606519208 13.6476821192053 52.302 121.434225844005 23.7774834437086 64.75 118.917345750873 23.0847682119205 54.259 0 0 cat,chimp,cow,dog,elephant,guinea_pig,horse,human,macaque,marmoset,mouse,opossum,orangutan,panda,rabbit, antisense antisense A549@0,AG04450@0,BJ@0.008311,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000235200.1 ENST00000230113.3 chr1:67995313-67998012 3 405 2290 intergenic 8.66 0 0,0,0 0 0,0,0 0 0 0 0 0 5.338 0 0 5.457 0 0 chimp,human,macaque,marmoset,orangutan, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0.0418517,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000232284.2 ENST00000420587.1 chr1:68297986-68668670 10 2222 368444 exonic 3.85 0 0,1,0 0 0,0,0 33.5265526552655 9.65984247266884 0 47.1620162016202 12.4765120343933 46.908 40.457695769577 18.3439220071436 45.025 0 0 cat,chimp,horse,human,macaque,marmoset,orangutan, lincRNA processed_transcript A549@0.171775,AG04450@0.0548715,BJ@0.251675,GM12878@0.137396,H1HESC@0.045447,HELAS3@0.169483,HEPG2@0.0383735,HMEC@0.01914,HSMM@0.138513,HUVEC@0.119984,K562@0.008009,MCF7@0.033959,NHEK@0.137791,NHLF@0.030851,SKNSHRA@0.076715, 0 0 0 0 ENSG00000232284.2 ENST00000541803.1 chr1:68297986-68668670 11 2219 368445 exonic 3.85 0 0,1,0 0 0,0,0 33.5718792248761 9.65981625480058 0 47.2257773771969 12.476478171776 46.908 40.5123929698062 18.3438722197343 45.025 0 0 cat,chimp,horse,human,macaque,marmoset,orangutan, lincRNA processed_transcript A549@0.171775,AG04450@0.0548715,BJ@0.251675,GM12878@0.137396,H1HESC@0.045447,HELAS3@0.169483,HEPG2@0.0383735,HMEC@0.01914,HSMM@0.138513,HUVEC@0.119984,K562@0.008009,MCF7@0.033959,NHEK@0.137791,NHLF@0.030851,SKNSHRA@0.076715, 0 0 0 0 ENSG00000232284.2 ENST00000413628.1 chr1:68297992-68668670 9 2049 368613 exonic 5.88 0 0,1,0 0 0,0,0 36.3572474377745 9.65541367233386 0 50.758906783797 12.4707918602979 47.434 43.8735968765251 18.3355117697965 45.025 0 0 cat,chimp,human,macaque,marmoset,orangutan,pig, lincRNA processed_transcript A549@0.171775,AG04450@0.0548715,BJ@0.251675,GM12878@0.137396,H1HESC@0.045447,HELAS3@0.169483,HEPG2@0.0383735,HMEC@0.01914,HSMM@0.138513,HUVEC@0.119984,K562@0.008009,MCF7@0.033959,NHEK@0.137791,NHLF@0.030851,SKNSHRA@0.076715, 0 0 0 0 ENSG00000232284.2 ENST00000414904.1 chr1:68421088-68492445 4 792 70559 intergenic -4.08 0 0,0,0 0 0,0,0 0 2.44406808486515 0 0 4.2968154310577 7.17 0 5.29167080032313 7.53 0 0 chimp,cow,human,macaque,marmoset, lincRNA processed_transcript A549@0.171775,AG04450@0.0548715,BJ@0.251675,GM12878@0.137396,H1HESC@0.045447,HELAS3@0.169483,HEPG2@0.0383735,HMEC@0.01914,HSMM@0.138513,HUVEC@0.119984,K562@0.008009,MCF7@0.033959,NHEK@0.137791,NHLF@0.030851,SKNSHRA@0.076715, 0 0 0 0 ENSG00000232284.2 ENST00000434072.1 chr1:68604040-68607471 2 456 2973 intronic -3.44 0 0,0,0 0 0,0,0 539.723684210526 91.1389169189371 52.668 407.168859649123 32.2771611167171 70.86 381.616228070175 31.0649175916583 76.933 0 0 cat,chimp,cow,dog,elephant,human,macaque,marmoset,mouse,orangutan,panda,pig,rabbit, lincRNA processed_transcript A549@0.171775,AG04450@0.0548715,BJ@0.251675,GM12878@0.137396,H1HESC@0.045447,HELAS3@0.169483,HEPG2@0.0383735,HMEC@0.01914,HSMM@0.138513,HUVEC@0.119984,K562@0.008009,MCF7@0.033959,NHEK@0.137791,NHLF@0.030851,SKNSHRA@0.076715, 0 0 0 0 ENSG00000233589.1 ENST00000425820.1 chr1:68944812-68949222 2 958 3450 exonic -7.55 0 0,0,0 0 0,0,0 208.091858037578 86.783768115942 6.84 276.856993736952 101.392753623188 3.825 226.021920668058 70.6959420289855 5.776 0 0 cat,chimp,cow,dog,elephant,guinea_pig,horse,human,macaque,marmoset,mouse,opossum,orangutan,panda,rabbit,rat, antisense antisense A549@0.022594,AG04450@0.0144825,BJ@0.002521,GM12878@0.013283,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0.0981,HSMM@0,HUVEC@0.010131,K562@0.0024185,MCF7@0.0042835,NHEK@0,NHLF@0,SKNSHRA@0.0978985, 0 0 0 0 ENSG00000234264.1 ENST00000428732.1 chr1:68962359-69004310 3 1244 40703 intronic -8.17 1 1,1,1 1 0,0,0 0 2.3659189740314 0 10.1655948553055 1.84490086725794 0 10.8914790996785 2.70215954597941 0 0 0 cat,chimp,cow,dog,elephant,horse,human,macaque,marmoset,orangutan,rabbit, lincRNA processed_transcript A549@0.101043,AG04450@0.0313765,BJ@0.0535945,GM12878@0.23286,H1HESC@0.0703195,HELAS3@1.01157,HEPG2@0.086786,HMEC@0.233134,HSMM@0.060113,HUVEC@0.09668,K562@0.470967,MCF7@0.421093,NHEK@0.088361,NHLF@0.240478,SKNSHRA@0.015906, 0 0 0 0 ENSG00000223883.1 ENST00000425517.1 chr1:69521581-69650686 5 622 128475 intergenic -1.45 1 0,0,1 0 0,0,0 0 4.72568982292275 0 0 9.17179217746643 0 0 9.98714146721152 0 0 0 cat,chimp,cow,dog,elephant,horse,human,macaque,marmoset,orangutan,pig,rabbit, lincRNA lincRNA A549@0,AG04450@0.0047215,BJ@0,GM12878@0.55451,H1HESC@0.009283,HELAS3@0.0133145,HEPG2@0.004673,HMEC@0,HSMM@0.0032815,HUVEC@0,K562@0,MCF7@0,NHEK@0.0434993,NHLF@0,SKNSHRA@0.0293575, 0 0 0 0 ENSG00000235446.1 ENST00000439878.1 chr1:69709055-69715106 2 432 5617 intergenic -2.17 1 0,0,0 0 0,0,0 0 16.8239273633612 0 0 58.8363895317785 0 0 55.981306747374 0 0 0 cat,chimp,cow,dog,guinea_pig,horse,human,macaque,marmoset,orangutan,panda, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000229639.1 ENST00000448001.1 chr1:69898938-69901092 2 456 1696 intergenic -4.69 1 0,0,1 0 0,0,0 0 0 0 0 6.64504716981132 0 0 3.21816037735849 0 0 0 chimp,guinea_pig,horse,human,macaque,orangutan, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@4.43323,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000237919.1 ENST00000414132.1 chr1:70479665-70496905 4 519 16715 intronic -2.99 1 0,0,0 0 0,0,0 0 43.1262937481304 0 15.1984585741811 70.4369129524379 0 21.5587668593449 74.2586897995812 0 0 0 cat,chimp,cow,dog,elephant,guinea_pig,horse,human,macaque,marmoset,orangutan,pig,rabbit, antisense antisense A549@0,AG04450@0.0032295,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0.002965,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0.0028115,SKNSHRA@0, 0 0 0 0 ENSG00000237919.1 ENST00000425754.1 chr1:70486506-70488081 2 692 881 exonic 1.06 1 0,0,0 0 0,0,0 97.7384393063584 0 270.973 150.065028901734 19.2871736662883 389.858 172.96676300578 23.844494892168 380.283 0 0 cat,chimp,cow,dog,elephant,guinea_pig,horse,human,macaque,marmoset,mouse,orangutan,panda,pig,rabbit,rat, antisense antisense A549@0,AG04450@0.0032295,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0.002965,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0.0028115,SKNSHRA@0, 0 0 0 0 ENSG00000231835.1 ENST00000441830.1 chr1:70612804-70617628 3 387 4433 intronic -3.37 1 0,0,0 0 0,0,0 0 19.1188811188811 0 0 25.6778705165802 9.384 0 25.1281299345815 9.826 0 0 chimp,cow,dog,guinea_pig,horse,human,macaque,marmoset,orangutan, antisense antisense A549@0,AG04450@0,BJ@0.006313,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0.0058275, 0 0 0 0 ENSG00000228988.1 ENST00000422107.1 chr1:70684272-70686706 2 455 1977 intronic -6.20 0 0,0,0 0 0,0,0 0 0 144.53 0 0 225.051 0 3.79919069296915 198.063 0 0 chimp,cow,horse,human,macaque,marmoset,orangutan,pig,rabbit, antisense antisense A549@0,AG04450@0,BJ@0.007829,GM12878@0.006399,H1HESC@0,HELAS3@0.0153425,HEPG2@0.005969,HMEC@0,HSMM@0,HUVEC@0.0076475,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0.010859, 0 0 0 0 ENSG00000226088.1 ENST00000413943.1 chr1:70825245-70826120 2 573 300 intronic 0.39 0 1,1,1 0 0,0,0 0 0 0 0 0 2.97 0 0 2.992 0 0 NA antisense antisense A549@0.0096075,AG04450@0,BJ@0,GM12878@0.0070115,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0.057255,HUVEC@0,K562@0,MCF7@0,NHEK@0.00222,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000229051.1 ENST00000419450.1 chr1:71172136-71252151 7 2079 77924 intergenic 4.81 1 0,1,0 0 0,0,0 4.89081289081289 0.388275755864689 0 14.6142376142376 0.562073302191879 0 15.8566618566619 0.861429084749243 0 0 0 chimp,horse,human,macaque,marmoset, lincRNA processed_transcript A549@0,AG04450@0,BJ@0.00232,GM12878@0,H1HESC@0.023953,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0.0228705,HUVEC@0,K562@0.004581,MCF7@0,NHEK@0,NHLF@0.0037205,SKNSHRA@0.034138, 0 0 0 0 ENSG00000226208.1 ENST00000423187.1 chr1:71181616-71185972 2 430 3924 intergenic -1.16 1 0,0,0 0 0,0,0 0 0 0 0 2.6131498470948 0 0 4.54918450560652 0 0 0 chimp,human,macaque, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000235782.1 ENST00000426775.1 chr1:71413062-71417176 3 746 3364 intronic -3.31 0 0,1,0 0 0,0,0 0 7.79429250891795 0 2.56300268096515 3.44649227110583 2.512 2.6058981233244 7.29340071343639 2.536 0 0 chimp,cow,guinea_pig,human,macaque,marmoset,orangutan, antisense antisense A549@0.014751,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0.0062,MCF7@0,NHEK@0,NHLF@0.005181,SKNSHRA@0.007182, 0 0 0 0 ENSG00000235079.1 ENST00000450461.1 chr1:71514538-71532867 2 551 17776 exonic 3.27 0 0,1,1 0 0,0,0 249.582577132486 49.7431930693069 13.384 343.067150635209 52.8641426642664 7.269 352.13611615245 48.9921242124212 10.303 0 0 chimp,cow,dog,elephant,guinea_pig,horse,human,macaque,marmoset,mouse,opossum,orangutan,panda,pig,platypus,rabbit,rat, antisense antisense A549@0.009538,AG04450@0.0166235,BJ@0.004376,GM12878@0.012123,H1HESC@0,HELAS3@0.0083125,HEPG2@0.003853,HMEC@0,HSMM@0,HUVEC@0,K562@0.0436855,MCF7@0,NHEK@0.00230833,NHLF@0,SKNSHRA@0.012323, 0 0 0 0 ENSG00000235079.1 ENST00000426999.1 chr1:71524006-71532641 2 605 8028 exonic 3.27 0 0,0,0 0 0,0,0 178.036363636364 110.143871449925 0 225.957024793388 116.669531639263 0 238.651239669421 107.915296462382 0 0 0 chimp,cow,guinea_pig,human,macaque,marmoset,opossum,orangutan,rabbit, antisense antisense A549@0.009538,AG04450@0.0166235,BJ@0.004376,GM12878@0.012123,H1HESC@0,HELAS3@0.0083125,HEPG2@0.003853,HMEC@0,HSMM@0,HUVEC@0,K562@0.0436855,MCF7@0,NHEK@0.00230833,NHLF@0,SKNSHRA@0.012323, 0 0 0 0 ENSG00000229956.1 ENST00000455406.1 chr1:71547007-71703406 4 779 155614 intergenic 1.13 1 1,1,1 1 0,0,0 0 12.3115272404797 0 9.54300385109114 20.8535992905523 95.411 11.5301668806162 20.7089336435025 106.364 0 0 cat,chimp,dog,elephant,guinea_pig,horse,human,macaque,marmoset,orangutan,pig,rabbit, lincRNA processed_transcript A549@0.065133,AG04450@0.0799355,BJ@0.125361,GM12878@0.375157,H1HESC@0.012255,HELAS3@0.0404995,HEPG2@0.03163,HMEC@0,HSMM@0.079558,HUVEC@0.0270635,K562@0.240133,MCF7@0.036064,NHEK@0.044677,NHLF@0.069332,SKNSHRA@0.120431, 0 0 0 0 ENSG00000229956.1 ENST00000413421.1 chr1:71547044-71733913 8 818 186037 intergenic -1.13 0 0,1,0 1 0,0,0 8.60635696821516 11.4624402672587 0 5.17848410757946 19.5254331127679 98.609 5.119804400978 19.5267339292721 109.7 0 0 chimp,cow,dog,elephant,guinea_pig,horse,human,macaque,marmoset,orangutan,pig,rabbit, lincRNA processed_transcript A549@0.065133,AG04450@0.0799355,BJ@0.125361,GM12878@0.375157,H1HESC@0.012255,HELAS3@0.0404995,HEPG2@0.03163,HMEC@0,HSMM@0.079558,HUVEC@0.0270635,K562@0.240133,MCF7@0.036064,NHEK@0.044677,NHLF@0.069332,SKNSHRA@0.120431, 0 0 0 0 ENSG00000229956.1 ENST00000415780.1 chr1:71558813-71702881 3 246 143818 intergenic -1.13 0 0,0,0 0 0,0,0 0 12.9727363751408 0 0 21.9971630811164 0 0 21.7686659528015 0 0 0 chimp,human,macaque,marmoset,orangutan, lincRNA processed_transcript A549@0.065133,AG04450@0.0799355,BJ@0.125361,GM12878@0.375157,H1HESC@0.012255,HELAS3@0.0404995,HEPG2@0.03163,HMEC@0,HSMM@0.079558,HUVEC@0.0270635,K562@0.240133,MCF7@0.036064,NHEK@0.044677,NHLF@0.069332,SKNSHRA@0.120431, 0 0 0 0 ENSG00000237726.1 ENST00000411721.1 chr1:71716682-71717802 2 516 602 intergenic -12.94 0 0,0,0 0 0,0,0 0 0 0 0 0 21.386 0 0 23.408 0 0 chimp,human,macaque,marmoset,orangutan, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0.011675,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0.0140795,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000227126.1 ENST00000430605.1 chr1:71867530-71873407 3 210 5663 intronic 0 0 0,0,0 0 0,0,0 0 212.696803814233 9.68 7.08571428571429 272.589969980576 2.629 7.17142857142857 268.010948260639 2.761 0 0 chimp,human,macaque,marmoset,orangutan, antisense antisense A549@0,AG04450@0,BJ@0,GM12878@0.0110045,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000231985.1 ENST00000446438.1 chr1:72036639-72039241 2 168 2432 intronic 0 0 0,0,0 0 0,0,0 0 15.1052631578947 0 0 17.5904605263158 10.378 0 24.7027138157895 19.568 0 0 chimp,human, antisense antisense A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0.0133695, 0 0 0 0 ENSG00000228853.1 ENST00000453121.1 chr1:72259915-72302695 3 531 42245 intronic -5.28 0 0,0,0 0 0,0,0 0 15.7440407148775 0 5.85122410546139 22.2057284885785 4 6.14500941619586 22.8086400757486 5.631 0 0 cat,chimp,cow,horse,human,marmoset,orangutan,pig,rabbit, sense_intronic sense_intronic A549@0,AG04450@0.0109735,BJ@0.133779,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0.0533395,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000225087.1 ENST00000445976.1 chr1:73214604-73364823 5 494 149717 intergenic 6.45 0 0,0,0 0 0,0,0 0 10.8715509928732 0 0 16.5270877722637 0 0 17.7047095520215 0 0 0 human,marmoset,orangutan, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0.0058605,H1HESC@1.47744,HELAS3@1.22819,HEPG2@1.00582,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0.183956,NHEK@0.17542,NHLF@0,SKNSHRA@0, 28 4 0 0 ENSG00000227016.1 ENST00000418078.1 chr1:73240954-73256963 6 1325 14674 intergenic 4.20 1 0,0,0 0 0,0,0 0 38.3639089546136 0 0 56.1395665803462 0 0 55.8846258688837 0 0 0 chimp,horse,human,macaque,marmoset,orangutan, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0.0044655,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000233973.1 ENST00000440762.1 chr1:73771853-73804560 4 3867 28834 intergenic 5.96 1 0,0,0 0 0,0,0 0 0.188458070333634 0 1.11249030256012 1.05590622182146 0 1.14972847168348 2.0246583894014 0 0 0 chimp,human,macaque,marmoset,orangutan, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0.0007555,H1HESC@0,HELAS3@0.006018,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000233973.1 ENST00000444827.1 chr1:73771912-73813995 3 360 41719 intergenic 1.48 1 0,0,0 0 0,0,0 0 0.130252402981855 0 0 1.05887005920564 0 0 4.3022603609866 0 0 0 chimp,human,macaque,marmoset, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0.0007555,H1HESC@0,HELAS3@0.006018,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000233973.1 ENST00000415686.1 chr1:73771917-73820934 3 355 48658 intergenic 1.48 1 0,0,1 0 0,0,0 0 0.111677422006659 0 0 2.00532286571581 0 0 5.2259854494636 0 0 0 chimp,human,macaque,marmoset, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0.0007555,H1HESC@0,HELAS3@0.006018,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000233973.1 ENST00000411903.1 chr1:73771922-73773255 2 439 892 intergenic 5.96 1 0,0,0 0 0,0,0 0 0 0 0 2.78026905829596 0 0 2.90358744394619 0 0 0 chimp,cow,dog,elephant,horse,human,macaque,marmoset,orangutan,panda, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0.0007555,H1HESC@0,HELAS3@0.006018,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000233973.1 ENST00000452553.1 chr1:73772899-73785344 3 477 11964 intergenic 0.91 1 0,0,0 0 0,0,0 0 0.454195921096623 0 0 2.33751253761284 2.48 0 4.66307255098629 2.59 0 0 chimp,human,macaque,orangutan, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0.0007555,H1HESC@0,HELAS3@0.006018,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000223479.2 ENST00000424953.1 chr1:74100899-74175264 3 554 73807 intergenic 4.31 0 0,0,0 0 0,0,0 0 6.46509138699581 0 0 10.7686398309103 0 0 11.6248323329766 0 0 0 chimp,human,macaque,orangutan, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000241626.1 ENST00000436262.1 chr1:74175051-74180897 2 318 5526 intergenic 0 1 0,1,0 0 0,0,0 0 1.99782844733985 0 0 5.10278682591386 0 0 5.43901556279406 0 0 0 cat,chimp,cow,human,macaque,marmoset,orangutan,panda, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000237324.1 ENST00000415549.1 chr1:74832267-74844486 3 379 11836 exonic -7.12 0 0,0,0 0 0,0,0 87.8232189973615 25.7597161203109 0 143.53562005277 31.3148022980737 0 153.208443271768 35.6585839810747 0 0 0 cat,chimp,cow,dog,elephant,guinea_pig,horse,human,macaque,marmoset,mouse,orangutan,panda,rat, antisense antisense A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000233894.1 ENST00000442876.1 chr1:74933879-74934808 2 495 432 intronic 1.50 0 0,0,1 0 0,0,0 91.8787878787879 0 0 65.8909090909091 0 8.305 71.7414141414141 0 8.913 0 0 cat,chimp,cow,dog,elephant,guinea_pig,horse,human,macaque,marmoset,orangutan,panda,rabbit,rat, antisense antisense A549@0,AG04450@0.004605,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0.003647,SKNSHRA@0.0052005, 0 0 0 0 ENSG00000233894.1 ENST00000411417.1 chr1:74934197-74935227 2 443 585 intronic 2.77 0 0,0,0 0 0,0,0 200.589164785553 84.8700854700855 0 108.555304740406 58.9299145299145 10.146 146.146726862303 63.1230769230769 11.089 0 0 chimp,cow,dog,elephant,guinea_pig,horse,human,macaque,marmoset,mouse,orangutan,panda,rabbit,rat, antisense antisense A549@0,AG04450@0.004605,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0.003647,SKNSHRA@0.0052005, 0 0 0 0 ENSG00000225495.1 ENST00000449696.1 chr1:75018088-75218059 3 628 199339 exonic -10.58 0 0,1,1 0 0,0,0 83.6130573248408 19.2734938973307 22.562 218.396496815287 29.8247056521805 26.052 202.082802547771 30.9598021460929 28.444 0 0 cat,chimp,cow,dog,elephant,guinea_pig,horse,human,macaque,marmoset,mouse,opossum,orangutan,panda,pig,platypus,rabbit,rat, processed_transcript processed_transcript A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000234497.1 ENST00000416017.1 chr1:75055419-75087403 3 585 31395 exonic 1.99 0 0,0,0 0 0,0,0 0 37.478420130594 12.19 3.14529914529915 38.4699792960662 71.823 7.52649572649573 36.917916865743 66.859 0 0 cat,chimp,cow,dog,elephant,guinea_pig,horse,human,macaque,marmoset,orangutan,panda,pig,rabbit, antisense antisense A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0.004639,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000229943.1 ENST00000438619.1 chr1:75428998-75430802 2 337 1465 intergenic 0 1 0,0,0 0 0,0,0 0 177.303071672355 0 4.96439169139466 279.277133105802 0 0 251.716723549488 0 0 0 chimp,cow,dog,elephant,guinea_pig,horse,human,marmoset,orangutan,panda,pig,rabbit, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000224127.1 ENST00000446238.1 chr1:75593515-75598743 2 668 4558 intronic -1.42 0 0,0,0 0 0,0,0 0 62.1004826678368 58.158 16.5434131736527 72.4842035980693 47.574 19.5583832335329 64.8725318121983 34.414 0 0 chimp,cow,dog,elephant,horse,human,macaque,marmoset,orangutan,panda,pig,rabbit, antisense antisense A549@0.004844,AG04450@0,BJ@0,GM12878@0,H1HESC@0.0073865,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0.0165155, 0 0 0 0 ENSG00000224149.1 ENST00000427892.1 chr1:75595659-75598261 2 2201 399 exonic 7.40 0 0,1,0 0 0,0,0 120.91503861881 0 16.56 154.700590640618 4.58646616541353 62.925 137.524761472058 4.64661654135338 68.895 0 0 cat,chimp,cow,horse,human,macaque,marmoset,orangutan,pig, antisense antisense A549@0.0039905,AG04450@0,BJ@0,GM12878@0,H1HESC@0.001321,HELAS3@0.002122,HEPG2@0,HMEC@0,HSMM@0.0010345,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0.0263175, 0 0 0 0 ENSG00000178193.4 ENST00000433521.1 chr1:76175700-76189696 4 857 13133 intergenic -6.80 0 0,0,0 0 0,0,0 0 0 0 4.91948658109685 0.169953552120612 3.51 4.97899649941657 0.177491814513059 3.536 0 0 chimp,human,macaque,marmoset,orangutan, antisense antisense A549@0.411355,AG04450@0.0796955,BJ@0.411157,GM12878@0.0301185,H1HESC@0.010355,HELAS3@0.194742,HEPG2@0.015147,HMEC@0,HSMM@0,HUVEC@0.0093045,K562@0.021467,MCF7@0,NHEK@0,NHLF@0.002241,SKNSHRA@0.260815, 0 0 0 0 ENSG00000225605.1 ENST00000436121.1 chr1:76477009-76485041 3 366 7662 intergenic -3.15 1 0,0,1 0 0,0,0 0 0 0 1.39344262295082 4.77642913077525 0 1.44808743169399 4.94766379535369 0 0 0 cat,chimp,cow,dog,elephant,guinea_pig,horse,human,macaque,marmoset,orangutan,panda, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000230027.1 ENST00000434540.1 chr1:76507376-76531913 2 397 24138 intergenic -6.14 0 0,1,0 0 0,0,0 0 15.9365730383627 0 0 21.7958405833126 0 0 23.9295716297953 0 0 0 cat,chimp,horse,human,macaque,marmoset,orangutan,panda, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0.005696, 0 0 0 0 ENSG00000237552.1 ENST00000427806.1 chr1:77223809-77244952 3 445 20694 intergenic -2.81 0 0,0,0 0 0,0,0 3.10112359550562 11.4102155214072 211.14 31.0719101123596 16.89750652363 164.303 20.1393258426966 17.2827389581521 137.967 0 0 cat,chimp,cow,horse,human,macaque,marmoset,orangutan,panda,rabbit,rat, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0.005699,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000230498.1 ENST00000454305.1 chr1:77533605-77544167 4 493 10063 intergenic -0.78 0 0,0,1 0 0,0,0 28.6024340770791 0.878763788134751 138.989 0 2.23611249130478 120.304 54.2677484787018 3.77223492000397 130.42 0 0 cat,chimp,cow,horse,human,macaque,marmoset,orangutan,rabbit, antisense antisense A549@0,AG04450@0.022608,BJ@0.024487,GM12878@0.073885,H1HESC@0.263802,HELAS3@0,HEPG2@0,HMEC@0.049432,HSMM@0.0045865,HUVEC@0,K562@0,MCF7@0.012136,NHEK@0.307846,NHLF@0.0038825,SKNSHRA@0.781975, 0 0 0 0 ENSG00000233099.1 ENST00000436206.1 chr1:77811731-77815270 2 375 3162 intronic -2.04 0 0,0,1 0 0,0,0 0 4.10499683744466 0 0 3.83017077798861 0 0 5.13314358001265 0 0 0 chimp,human,macaque,marmoset,orangutan, antisense antisense A549@0,AG04450@0,BJ@0.042919,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0.0514065,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000235927.1 ENST00000421331.1 chr1:78347033-78355224 3 2289 5898 exonic 22.48 0 0,0,0 0 0,0,0 15.7531673219747 0 54.981 45.2865880297073 0.648355374703289 111.938 60.694626474443 0.680908782638182 100.572 0 0 human, lincRNA processed_transcript A549@0.0425435,AG04450@0.313647,BJ@0.257766,GM12878@0.0008795,H1HESC@0.166412,HELAS3@0.010927,HEPG2@0.019464,HMEC@0.111744,HSMM@0.197659,HUVEC@0.171178,K562@0,MCF7@0.0116095,NHEK@0.060554,NHLF@0.555913,SKNSHRA@0.0954825, 0 0 0 0 ENSG00000237413.1 ENST00000436742.1 chr1:78695283-78759574 6 1987 62294 intergenic 5.00 0 0,0,0 0 0,0,0 6.93306492199295 6.89085626224034 14.26 6.86965274282838 7.54560631842553 33.324 21.389028686462 10.5471152920024 37.137 0 0 chimp,horse,human,macaque,orangutan,panda,pig, processed_transcript processed_transcript A549@0,AG04450@0.0044575,BJ@0.0154095,GM12878@0.0049425,H1HESC@0.007119,HELAS3@0.020944,HEPG2@0.0150545,HMEC@0,HSMM@0,HUVEC@0.0113275,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0.046262, 0 0 0 0 ENSG00000237413.1 ENST00000413519.1 chr1:78695306-78835149 6 1164 138669 intronic 5.36 0 0,0,0 0 0,0,0 11.8350515463918 7.71720427781263 14.26 3.90549828178694 8.71171638938768 33.63 4.52920962199313 11.5307026083696 303.236 0 0 chimp,horse,human,macaque,orangutan, processed_transcript processed_transcript A549@0,AG04450@0.0044575,BJ@0.0154095,GM12878@0.0049425,H1HESC@0.007119,HELAS3@0.020944,HEPG2@0.0150545,HMEC@0,HSMM@0,HUVEC@0.0113275,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0.046262, 0 0 0 0 ENSG00000235011.1 ENST00000415629.1 chr1:79789454-79790534 2 340 738 intergenic -3.22 0 0,0,1 0 0,0,0 0 0 0 0 0 0 0 0 0 0 0 NA lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000225598.1 ENST00000458146.1 chr1:80839049-80840306 2 578 677 intergenic 1.00 1 0,0,0 0 0,0,0 0 0 0 0 0 3.822 0 0 4.121 0 0 chimp,guinea_pig,horse,human,macaque,marmoset,orangutan,rabbit, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0.014119,HSMM@0,HUVEC@0,K562@0,MCF7@0.013944,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000224326.1 ENST00000437080.1 chr1:81000663-81050048 2 347 49036 intergenic -8.14 0 0,0,0 0 0,0,0 0 10.9128599396362 0 0 17.6696508687495 0 0 18.6300269189983 0 0 0 chimp,cow,dog,elephant,guinea_pig,horse,human,macaque,marmoset,orangutan,panda,rabbit,rat, lincRNA lincRNA A549@0.0062195,AG04450@0,BJ@0,GM12878@0,H1HESC@0.0170305,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0.061655, 0 0 0 0 ENSG00000234184.1 ENST00000418041.1 chr1:81001440-81112473 3 540 110489 intergenic -11.34 1 0,0,1 0 0,0,0 244.166666666667 8.31618532161573 71.685 307.424074074074 11.3384680827956 81.439 261.037037037037 11.6308682312266 78.405 0 0 cat,chimp,cow,dog,elephant,guinea_pig,horse,human,macaque,marmoset,mouse,opossum,orangutan,pig,rabbit,rat, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@1.30797,H1HESC@0,HELAS3@0.004941,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000234184.1 ENST00000443104.1 chr1:81001440-81112473 4 587 110440 intergenic -2.72 1 0,0,1 0 0,0,0 224.616695059625 8.31987504527345 71.685 282.809199318569 11.3434987323434 81.439 240.136286201022 11.6360286128214 78.405 0 0 cat,chimp,cow,dog,elephant,guinea_pig,horse,human,macaque,marmoset,mouse,opossum,orangutan,pig,rabbit,rat, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@1.30797,H1HESC@0,HELAS3@0.004941,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000234184.1 ENST00000443565.1 chr1:81106969-81112473 3 470 5030 intergenic -3.91 1 1,1,1 0 0,0,0 280.531914893617 28.175944333996 0 348.989361702128 35.1361829025845 7.44 299.914893617021 23.2658051689861 8.34 0 0 chimp,human,macaque,marmoset,orangutan, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@1.30797,H1HESC@0,HELAS3@0.004941,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000227960.1 ENST00000439024.1 chr1:81970784-81971981 2 341 854 intronic -5.32 0 0,0,0 0 0,0,0 14.7184750733138 0 0 30.3695014662757 1.88524590163934 87.22 31.0234604105572 1.99180327868852 196.729 0 0 chimp,cow,dog,elephant,guinea_pig,horse,human,marmoset,orangutan,panda,rabbit, sense_intronic sense_intronic A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0.0174485, 0 0 0 0 ENSG00000234953.2 ENST00000443939.1 chr1:81979565-82023387 4 639 43177 intronic -3.30 1 0,1,0 0 0,0,0 51.4992175273865 27.4733075480001 0 84.8012519561815 42.98598791023 0 103.721439749609 50.9780670264261 2.992 0 0 chimp,cow,dog,elephant,guinea_pig,horse,human,macaque,marmoset,orangutan,panda, processed_transcript processed_transcript A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0.003226,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000236676.1 ENST00000430748.1 chr1:82051626-82091398 3 638 39130 intronic -2.01 0 0,1,0 0 0,0,0 0 33.6057245080501 22.352 131.590909090909 62.4093789930999 44.081 146.836990595611 69.3570917454638 33.68 0 0 chimp,cow,dog,elephant,guinea_pig,horse,human,macaque,marmoset,mouse,opossum,orangutan,panda,pig,rabbit,rat, processed_transcript processed_transcript A549@0,AG04450@0,BJ@0,GM12878@0.003657,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0.003793,K562@0,MCF7@0,NHEK@0,NHLF@0.009098,SKNSHRA@0, 0 0 0 0 ENSG00000233290.1 ENST00000420549.1 chr1:82680904-82726817 2 669 45242 intergenic 3.03 0 0,1,0 0 0,0,0 60.4887892376682 34.1252155077141 0 227.751868460389 46.7069095088634 0 195.284005979073 45.5014588214491 0 0 0 chimp,cow,dog,elephant,guinea_pig,horse,human,macaque,marmoset,mouse,opossum,orangutan,panda,pig,rabbit,rat, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@3.62092,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000230817.1 ENST00000452901.1 chr1:83368866-83632498 11 1701 261911 intergenic 0.64 0 0,0,0 0 0,0,0 0 32.8425304779104 0 27.4109347442681 39.7550007445277 0 28.9864785420341 39.0267533627835 0 0 0 chimp,human,macaque,marmoset,orangutan, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0.001127,SKNSHRA@0, 0 0 0 0 ENSG00000230817.1 ENST00000419658.1 chr1:83373245-83463244 4 334 89659 intergenic 0 0 0,0,0 0 0,0,0 0 31.0162058465966 73.428 0 41.7172620707347 67.098 0 41.4017555404365 61.441 0 0 chimp,dog,horse,human,macaque,marmoset,orangutan,panda,pig, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0.001127,SKNSHRA@0, 0 0 0 0 ENSG00000236268.1 ENST00000452834.1 chr1:83439565-83450605 3 1523 9513 intergenic 3.16 1 0,1,0 0 0,0,0 0 72.6053821086934 76.95 2.6677609980302 121.999369284138 29.351 2.80170715692712 109.077683170398 32.475 0 0 chimp,dog,human,macaque,marmoset,orangutan, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0.0040975,H1HESC@0.0112835,HELAS3@0.001798,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0.004148,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000236268.1 ENST00000421931.1 chr1:83439612-83451891 3 1473 10802 intergenic 3.16 1 0,0,0 0 0,0,0 18.5050916496945 80.6882984632475 10.626 26.1154107264087 121.98259581559 28.27 25.2742701968771 109.227643029069 26.608 0 0 chimp,dog,human,macaque,marmoset,orangutan, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0.0040975,H1HESC@0.0112835,HELAS3@0.001798,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0.004148,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000231364.1 ENST00000446227.1 chr1:83911736-83920454 2 734 7982 intergenic -3.64 1 0,0,0 0 0,0,0 143.713896457766 26.5566274116763 72.954 117.675749318801 28.7593335003758 16.045 134.377384196185 34.2015785517414 16.484 0 0 chimp,cow,dog,elephant,guinea_pig,horse,human,macaque,marmoset,panda,pig,rabbit, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000233008.1 ENST00000417975.1 chr1:84041459-84326679 3 3174 282042 intergenic 3.02 0 0,1,0 0 0,0,0 0 42.6782039554392 0 0 56.1963289155516 0 6.60964083175803 56.269594599386 0 0 0 chimp,human,macaque,marmoset,orangutan,rabbit, lincRNA processed_transcript A549@0.00109,AG04450@0.003045,BJ@0.003594,GM12878@0,H1HESC@0.0193035,HELAS3@0,HEPG2@0,HMEC@0.607609,HSMM@0,HUVEC@0.01073,K562@0,MCF7@0.0769865,NHEK@0.0935317,NHLF@0,SKNSHRA@0.004418, 0 0 0 0 ENSG00000237076.1 ENST00000439186.1 chr1:84255963-84267148 3 680 10501 intergenic -3.23 0 0,0,1 0 0,0,0 68.3823529411765 33.0036187029807 54.036 90.8529411764706 32.6972669269593 1.195 107.088235294118 35.2338824873822 2.47 0 0 cat,chimp,cow,elephant,guinea_pig,horse,human,macaque,marmoset,mouse,orangutan,panda,pig,rabbit, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000233008.1 ENST00000457273.1 chr1:84267199-84326229 3 1988 57038 intergenic 4.53 0 0,1,1 0 0,0,0 20.6438631790744 28.7613170167257 0 104.500503018109 32.0551737438199 0 137.009054325956 34.7740453732599 0 0 0 cat,chimp,dog,elephant,guinea_pig,horse,human,macaque,marmoset,orangutan,panda,rabbit, lincRNA processed_transcript A549@0.00109,AG04450@0.003045,BJ@0.003594,GM12878@0,H1HESC@0.0193035,HELAS3@0,HEPG2@0,HMEC@0.607609,HSMM@0,HUVEC@0.01073,K562@0,MCF7@0.0769865,NHEK@0.0935317,NHLF@0,SKNSHRA@0.004418, 0 0 0 0 ENSG00000233008.1 ENST00000417565.1 chr1:84297304-84326626 3 468 28850 intergenic -0.35 1 1,1,1 0 0,0,0 0 39.9190641247834 0 0 39.9844020797227 0 0 45.4421490467938 0 0 0 chimp,human,orangutan, lincRNA processed_transcript A549@0.00109,AG04450@0.003045,BJ@0.003594,GM12878@0,H1HESC@0.0193035,HELAS3@0,HEPG2@0,HMEC@0.607609,HSMM@0,HUVEC@0.01073,K562@0,MCF7@0.0769865,NHEK@0.0935317,NHLF@0,SKNSHRA@0.004418, 0 0 0 0 ENSG00000233008.1 ENST00000413975.1 chr1:84297304-84326653 2 380 28967 intergenic -0.56 1 1,1,1 0 0,0,0 0 39.757827873097 0 0 39.8229019228778 0 0 45.2586046190493 0 0 0 chimp,human,orangutan, lincRNA processed_transcript A549@0.00109,AG04450@0.003045,BJ@0.003594,GM12878@0,H1HESC@0.0193035,HELAS3@0,HEPG2@0,HMEC@0.607609,HSMM@0,HUVEC@0.01073,K562@0,MCF7@0.0769865,NHEK@0.0935317,NHLF@0,SKNSHRA@0.004418, 0 0 0 0 ENSG00000233008.1 ENST00000419733.1 chr1:84297304-84326706 3 397 29001 intergenic -3.80 1 1,1,1 0 0,0,0 0 39.7112168545912 0 0 39.7762146132892 0 0 45.2055446363919 0 0 0 NA lincRNA processed_transcript A549@0.00109,AG04450@0.003045,BJ@0.003594,GM12878@0,H1HESC@0.0193035,HELAS3@0,HEPG2@0,HMEC@0.607609,HSMM@0,HUVEC@0.01073,K562@0,MCF7@0.0769865,NHEK@0.0935317,NHLF@0,SKNSHRA@0.004418, 0 0 0 0 ENSG00000233061.1 ENST00000455929.1 chr1:84444801-84449983 2 2919 2261 intronic -1.62 1 0,0,1 0 0,0,0 13.8043850633779 0 0 0 0 0 0 0 0 0 0 chimp,human,macaque,marmoset,orangutan, sense_intronic sense_intronic A549@0.033571,AG04450@0.094722,BJ@0.070402,GM12878@0,H1HESC@0.04176,HELAS3@0.0122685,HEPG2@0.0157835,HMEC@0.005501,HSMM@0.033676,HUVEC@0.0352965,K562@0.0030345,MCF7@0.006273,NHEK@0.03231,NHLF@0.0141815,SKNSHRA@0.134308, 0 0 0 0 ENSG00000223653.1 ENST00000427819.1 chr1:85742398-85865646 5 1945 121295 exonic 6.49 0 0,1,1 0 0,0,0 0 23.2650645121398 72.087 7.573264781491 21.8027371284884 78.896 7.38251928020566 24.5205408302073 81.825 0 0 chimp,human,macaque,orangutan, lincRNA processed_transcript A549@0.005953,AG04450@0.0051715,BJ@0.026571,GM12878@0.0189785,H1HESC@0.029265,HELAS3@0,HEPG2@0,HMEC@0.02012,HSMM@0,HUVEC@0.0858105,K562@0,MCF7@0.0010545,NHEK@0.030091,NHLF@0.005256,SKNSHRA@0.0126395, 0 0 0 0 ENSG00000223653.1 ENST00000426125.1 chr1:85743355-85913807 3 461 169987 exonic -2.19 0 0,0,0 0 0,0,0 0 23.113702812568 0 24.117136659436 25.6790107478807 14.08 23.0845986984816 27.631983622277 14.141 0 0 chimp,dog,elephant,guinea_pig,horse,human,macaque,marmoset,orangutan,panda, lincRNA processed_transcript A549@0.005953,AG04450@0.0051715,BJ@0.026571,GM12878@0.0189785,H1HESC@0.029265,HELAS3@0,HEPG2@0,HMEC@0.02012,HSMM@0,HUVEC@0.0858105,K562@0,MCF7@0.0010545,NHEK@0.030091,NHLF@0.005256,SKNSHRA@0.0126395, 0 0 0 0 ENSG00000230285.1 ENST00000426794.1 chr1:86064814-86066417 2 253 1348 intergenic -0.82 0 0,0,1 0 0,0,0 0 0 0 8.50197628458498 39.2307121661721 16.766 0 38.0430267062315 19.87 0 0 cat,chimp,cow,dog,horse,human,macaque,marmoset,orangutan,panda, lincRNA lincRNA A549@0,AG04450@0.0252905,BJ@0.00949,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0.017879,HUVEC@0,K562@0,MCF7@0.008063,NHEK@0,NHLF@0.509695,SKNSHRA@0, 0 0 0 0 ENSG00000236915.1 ENST00000456587.1 chr1:87036864-87158886 4 518 121498 exonic -1.18 0 0,0,0 0 0,0,0 17.8378378378378 4.44343116759124 0 88.2432432432433 9.11365619187147 0 95.4420849420849 11.7129417768194 0 0 0 chimp,cow,dog,elephant,guinea_pig,horse,human,macaque,marmoset,mouse,orangutan,pig,rabbit,rat, antisense antisense A549@0.006461,AG04450@0,BJ@0,GM12878@0.021163,H1HESC@0.009667,HELAS3@0,HEPG2@0.0204945,HMEC@0,HSMM@0,HUVEC@0.0312795,K562@0,MCF7@0.02731,NHEK@0.003732,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000224198.1 ENST00000422417.1 chr1:87409368-87410425 2 231 824 intronic -18.79 0 0,0,0 0 0,0,0 0 12.5485436893204 0 8.27705627705628 3.77063106796116 4.462 8.41558441558442 3.95995145631068 4.534 0 0 chimp,human,macaque,orangutan, antisense antisense A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000227290.1 ENST00000452509.1 chr1:87819207-87837338 4 885 17240 intergenic -1.46 1 0,0,0 0 0,0,0 111.019209039548 110.969141531323 0 97.045197740113 124.556148491879 0 93.4576271186441 123.369721577726 0 0 0 chimp,dog,elephant,guinea_pig,horse,human,macaque,marmoset,mouse,orangutan,panda,rabbit, lincRNA lincRNA A549@0,AG04450@0.00333,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000224235.1 ENST00000437598.1 chr1:88365592-88371397 3 784 5017 intergenic 0.23 0 0,0,0 0 0,0,0 149.331632653061 117.707394857485 69.438 164.914540816327 122.447279250548 72.627 167.543367346939 114.644209687064 78.939 0 0 cat,chimp,cow,dog,elephant,horse,human,macaque,marmoset,mouse,panda,rabbit, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0.0093625,MCF7@0.0130625,NHEK@0.020093,NHLF@0,SKNSHRA@0.008659, 0 0 0 0 ENSG00000237505.1 ENST00000458097.1 chr1:89003196-89150887 4 3538 144147 intronic -2.61 0 0,0,1 0 0,0,0 34.8434143583946 26.5288073980034 9.68 101.566139061617 32.6282822396581 36.491 102.298473713963 35.5237292486142 37.951 0 0 chimp,human,marmoset,orangutan,rat, lincRNA processed_transcript A549@0.0116465,AG04450@0.0239895,BJ@0.0206065,GM12878@0.038643,H1HESC@0.0272795,HELAS3@0.051146,HEPG2@0.00718,HMEC@0.002312,HSMM@0.0385095,HUVEC@0.00843,K562@0.063063,MCF7@0.0861175,NHEK@0.0182757,NHLF@0.044851,SKNSHRA@0.045777, 0 0 0 0 ENSG00000237505.1 ENST00000425750.1 chr1:89005986-89150635 5 845 143796 intronic -7.05 0 0,1,1 1 0,0,0 5.09112426035503 26.4969818353779 23.568 43.7597633136095 32.3871248157112 74.434 45.3905325443787 35.2704317227183 78.233 0 0 cat,chimp,cow,dog,elephant,guinea_pig,horse,human,macaque,marmoset,mouse,orangutan,panda,pig,rabbit,rat, lincRNA processed_transcript A549@0.0116465,AG04450@0.0239895,BJ@0.0206065,GM12878@0.038643,H1HESC@0.0272795,HELAS3@0.051146,HEPG2@0.00718,HMEC@0.002312,HSMM@0.0385095,HUVEC@0.00843,K562@0.063063,MCF7@0.0861175,NHEK@0.0182757,NHLF@0.044851,SKNSHRA@0.045777, 0 0 0 0 ENSG00000247275.1 ENST00000498904.1 chr1:89488180-89515726 5 1354 26184 exonic -1.39 0 0,1,0 0 0,0,0 0 0 0 1.23559822747415 0 0 1.2562776957164 0.0928047662694775 0 0 1 chimp,human,macaque,orangutan, lincRNA lincRNA A549@0.019945,AG04450@0.0230005,BJ@0.033357,GM12878@0.056483,H1HESC@0.040732,HELAS3@0.125396,HEPG2@0.01863,HMEC@0.009039,HSMM@0.0141165,HUVEC@0.120177,K562@0.045275,MCF7@0.003026,NHEK@0.007611,NHLF@0.027104,SKNSHRA@0.021712, 0 0 0 0 ENSG00000237568.1 ENST00000437128.1 chr1:89726265-89735437 2 322 8848 exonic 0 0 0,1,0 0 0,0,0 0 8.89805605786619 0 0 31.3304701627486 0 0 40.7684222423146 0 0 0 chimp,cow,horse,human,marmoset,orangutan, antisense antisense A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000231999.2 ENST00000443562.1 chr1:90048800-90097750 5 765 48177 exonic 1.90 0 0,0,0 0 0,0,0 163.286274509804 31.1979990451875 11.66 136.337254901961 30.5621769724142 114.278 128.662745098039 32.3843327728999 100.132 0 0 cat,chimp,cow,elephant,human,macaque,marmoset,orangutan,pig, antisense antisense A549@0.382247,AG04450@0.189103,BJ@0.113833,GM12878@0.293706,H1HESC@0.094954,HELAS3@0.0349335,HEPG2@0.011229,HMEC@0.062601,HSMM@0.012497,HUVEC@0.689682,K562@0.178305,MCF7@0.03102,NHEK@0.086284,NHLF@0.123027,SKNSHRA@1.04879, 0 0 0 0 ENSG00000231999.2 ENST00000415584.2 chr1:90090409-90098453 3 785 7255 intergenic 2.92 1 0,1,0 1 0,0,0 0 0.777808407994487 17.828 9.64968152866242 233.238869745003 132.873 9.6624203821656 246.077325982081 120.647 0 0 cow,horse,human,macaque,marmoset,orangutan,panda, antisense antisense A549@0.382247,AG04450@0.189103,BJ@0.113833,GM12878@0.293706,H1HESC@0.094954,HELAS3@0.0349335,HEPG2@0.011229,HMEC@0.062601,HSMM@0.012497,HUVEC@0.689682,K562@0.178305,MCF7@0.03102,NHEK@0.086284,NHLF@0.123027,SKNSHRA@1.04879, 0 0 0 0 ENSG00000231999.2 ENST00000526694.1 chr1:90091820-90098306 3 848 5634 intergenic 2.92 0 0,1,0 0 0,0,0 0 1.00159744408946 11.66 4.59905660377358 10.0399361022364 124.239 7.46462264150943 11.1302804401846 109.608 1 1 chimp,human,macaque,marmoset,orangutan, antisense antisense A549@0.382247,AG04450@0.189103,BJ@0.113833,GM12878@0.293706,H1HESC@0.094954,HELAS3@0.0349335,HEPG2@0.011229,HMEC@0.062601,HSMM@0.012497,HUVEC@0.689682,K562@0.178305,MCF7@0.03102,NHEK@0.086284,NHLF@0.123027,SKNSHRA@1.04879, 0 0 0 0 ENSG00000230735.1 ENST00000429074.1 chr1:90095284-90141945 4 433 46222 intronic -7.04 1 0,1,0 0 0,0,0 0 3.8904417809701 0 42.9468822170901 12.7426766474839 30.796 48.6997690531178 13.5117909220717 35.207 0 0 cat,chimp,cow,dog,elephant,guinea_pig,horse,human,macaque,marmoset,mouse,orangutan,pig,rabbit,rat, processed_transcript processed_transcript A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000231999.2 ENST00000528692.1 chr1:90097435-90098320 2 437 446 intergenic 2.92 1 0,1,1 0 0,0,0 0 0 11.66 8.92448512585812 12.7219730941704 124.239 14.4851258581236 13.9372197309417 109.608 0 0 chimp,cow,guinea_pig,horse,human,macaque,marmoset,orangutan,pig,rabbit, antisense antisense A549@0.382247,AG04450@0.189103,BJ@0.113833,GM12878@0.293706,H1HESC@0.094954,HELAS3@0.0349335,HEPG2@0.011229,HMEC@0.062601,HSMM@0.012497,HUVEC@0.689682,K562@0.178305,MCF7@0.03102,NHEK@0.086284,NHLF@0.123027,SKNSHRA@1.04879, 0 0 0 0 ENSG00000231613.1 ENST00000432395.1 chr1:90254473-90256051 2 507 1069 intergenic -2.31 1 0,0,1 0 0,0,0 0 0 0 8.93096646942801 4.47146866230122 0 9.12031558185404 8.7221702525725 0 0 0 cat,chimp,cow,dog,elephant,guinea_pig,human,macaque,marmoset,orangutan,rabbit, sense_intronic sense_intronic A549@0,AG04450@0,BJ@0,GM12878@0.0111685,H1HESC@0.005959,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0.0107225,K562@0.0328585,MCF7@0.004328,NHEK@0.0136777,NHLF@0,SKNSHRA@0.010773, 0 0 0 0 ENSG00000237081.1 ENST00000445845.1 chr1:90421225-90422281 2 596 458 intergenic -2.50 0 0,0,0 0 0,0,0 16.8322147651007 6.84497816593886 32.523 0 11.796943231441 63.087 20.2147651006711 20.6724890829694 63.154 0 0 chimp,human,macaque,marmoset,orangutan, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0.0045615,HMEC@0,HSMM@0.003812,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000232236.1 ENST00000451930.1 chr1:90467706-90468748 2 294 746 intronic 0 0 0,0,0 0 0,0,0 0 0 0 0 0 0 0 0 6.075 0 0 cat,chimp,dog,guinea_pig,horse,human,macaque,marmoset,orangutan, antisense antisense A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000229201.1 ENST00000435832.1 chr1:90976467-90999029 4 227 22329 intergenic 1.78 0 0,0,0 0 0,0,0 0 15.5826055801872 211.199 0 19.3435442697837 307.167 0 21.6962246406019 305.194 0 0 cat,chimp,human,macaque,orangutan, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0.915485,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000233593.1 ENST00000455680.1 chr1:91295104-91301718 2 2984 3628 intergenic -0.07 0 0,1,1 0 0,0,0 122.950402144772 545.506615214994 0 119.912868632708 535.032800441014 2.7 122.937332439678 521.984564498346 11.831 0 0 cat,chimp,cow,dog,elephant,horse,human,macaque,marmoset,orangutan,panda,pig,rabbit, lincRNA processed_transcript A549@0.819327,AG04450@0.024713,BJ@0.0921235,GM12878@0.107243,H1HESC@0.211899,HELAS3@0.210883,HEPG2@2.59865,HMEC@0.001371,HSMM@0.202119,HUVEC@0.0072565,K562@3.14671,MCF7@0.141176,NHEK@0.00468,NHLF@0.0804415,SKNSHRA@0.909627, 0 0 0 0 ENSG00000233593.1 ENST00000435649.1 chr1:91297082-91317175 2 806 19285 intergenic -0.07 0 0,1,0 1 0,0,0 199.838709677419 176.759450350013 65.013 169.581885856079 171.912470832253 179.936 183.157568238213 176.964480165932 195.486 0 0 cat,chimp,cow,dog,elephant,guinea_pig,horse,human,macaque,marmoset,orangutan,panda,rabbit, lincRNA processed_transcript A549@0.819327,AG04450@0.024713,BJ@0.0921235,GM12878@0.107243,H1HESC@0.211899,HELAS3@0.210883,HEPG2@2.59865,HMEC@0.001371,HSMM@0.202119,HUVEC@0.0072565,K562@3.14671,MCF7@0.141176,NHEK@0.00468,NHLF@0.0804415,SKNSHRA@0.909627, 0 0 0 0 ENSG00000233593.1 ENST00000443802.1 chr1:91297426-91317207 3 709 19068 intergenic 6.65 0 1,1,1 1 0,0,0 227.179125528914 178.771029997902 65.013 189.662905500705 173.868890287392 176.597 197.356840620592 178.978393119362 194.73 0 0 chimp,cow,dog,elephant,guinea_pig,human,macaque,marmoset,orangutan,rabbit, lincRNA processed_transcript A549@0.819327,AG04450@0.024713,BJ@0.0921235,GM12878@0.107243,H1HESC@0.211899,HELAS3@0.210883,HEPG2@2.59865,HMEC@0.001371,HSMM@0.202119,HUVEC@0.0072565,K562@3.14671,MCF7@0.141176,NHEK@0.00468,NHLF@0.0804415,SKNSHRA@0.909627, 0 0 0 0 ENSG00000225446.1 ENST00000425185.1 chr1:91317316-91319843 2 578 1947 intergenic -3.47 0 0,1,0 0 0,0,0 112.479238754325 0 0 303.743944636678 3.50898818695429 7.791 332.173010380623 4.63482280431433 7.182 0 0 chimp,cow,dog,guinea_pig,horse,human,macaque,marmoset,mouse,opossum,orangutan,panda,rabbit,rat, lincRNA lincRNA A549@0.014287,AG04450@0,BJ@0,GM12878@0,H1HESC@0.01073,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0.0078605,HUVEC@0,K562@0.018714,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0.0156605, 0 0 0 0 ENSG00000223745.1 ENST00000413606.1 chr1:93727743-93811388 7 763 82870 intronic -3.44 0 0,1,0 1 0,0,0 0 3.23672016411246 159.485 3.92791612057667 7.76801013635815 254.463 204.246395806029 30.6322674067817 224.752 0 0 chimp,human,macaque,marmoset,orangutan, processed_transcript processed_transcript A549@8.17084,AG04450@2.83846,BJ@3.28933,GM12878@16.3151,H1HESC@3.19794,HELAS3@2.80383,HEPG2@3.9793,HMEC@0.836228,HSMM@1.72588,HUVEC@1.64508,K562@15.8808,MCF7@3.18343,NHEK@5.65039,NHLF@1.33898,SKNSHRA@16.1967, 0 0 0 0 ENSG00000223745.1 ENST00000457025.1 chr1:93730197-93804088 4 409 73476 exonic 4.26 1 0,1,1 0 0,0,0 92.4205378973105 2.8449153465077 0 126.914425427873 7.70706080897164 6.12 109.643031784841 15.0117861614677 10.005 0 0 cat,chimp,cow,dog,elephant,guinea_pig,horse,human,macaque,marmoset,mouse,orangutan,panda,pig,rabbit, processed_transcript processed_transcript A549@8.17084,AG04450@2.83846,BJ@3.28933,GM12878@16.3151,H1HESC@3.19794,HELAS3@2.80383,HEPG2@3.9793,HMEC@0.836228,HSMM@1.72588,HUVEC@1.64508,K562@15.8808,MCF7@3.18343,NHEK@5.65039,NHLF@1.33898,SKNSHRA@16.1967, 0 0 0 0 ENSG00000223745.1 ENST00000451302.1 chr1:93730197-93811582 11 1196 80169 exonic 1.98 1 0,0,1 0 0,0,0 31.6053511705686 2.86865247165363 177.161 85.9130434782609 7.40573039454153 223.519 88.3536789297659 14.0983173046938 208.515 0 0 chimp,guinea_pig,horse,human,macaque,marmoset,mouse,orangutan,rat, processed_transcript processed_transcript A549@8.17084,AG04450@2.83846,BJ@3.28933,GM12878@16.3151,H1HESC@3.19794,HELAS3@2.80383,HEPG2@3.9793,HMEC@0.836228,HSMM@1.72588,HUVEC@1.64508,K562@15.8808,MCF7@3.18343,NHEK@5.65039,NHLF@1.33898,SKNSHRA@16.1967, 0 0 0 0 ENSG00000223745.1 ENST00000446528.1 chr1:93730202-93792474 5 484 61780 exonic 4.26 1 0,0,1 0 0,0,0 78.099173553719 2.88750404661703 0 101.979338842975 7.50223373259955 3.224 138.739669421488 15.7441404985432 7.53 0 0 cat,chimp,cow,dog,guinea_pig,horse,human,macaque,marmoset,mouse,orangutan,pig,rabbit,rat, processed_transcript processed_transcript A549@8.17084,AG04450@2.83846,BJ@3.28933,GM12878@16.3151,H1HESC@3.19794,HELAS3@2.80383,HEPG2@3.9793,HMEC@0.836228,HSMM@1.72588,HUVEC@1.64508,K562@15.8808,MCF7@3.18343,NHEK@5.65039,NHLF@1.33898,SKNSHRA@16.1967, 0 0 0 0 ENSG00000223745.1 ENST00000415150.1 chr1:93730204-93790248 5 443 59593 exonic 4.26 1 1,1,1 0 0,0,0 85.3273137697517 2.99347238769654 0 111.417607223476 7.48977228869163 11.27 95.3814898419865 11.8527176010605 91.681 0 0 cat,chimp,dog,horse,human,macaque,marmoset,mouse,orangutan,panda,pig,rabbit, processed_transcript processed_transcript A549@8.17084,AG04450@2.83846,BJ@3.28933,GM12878@16.3151,H1HESC@3.19794,HELAS3@2.80383,HEPG2@3.9793,HMEC@0.836228,HSMM@1.72588,HUVEC@1.64508,K562@15.8808,MCF7@3.18343,NHEK@5.65039,NHLF@1.33898,SKNSHRA@16.1967, 0 0 0 0 ENSG00000223745.1 ENST00000455474.1 chr1:93730207-93803026 3 296 72519 exonic 4.26 1 1,1,1 0 0,0,0 127.702702702703 2.88245839021498 0 166.75 7.8087673575201 0 142.75 15.2098898219777 0 0 0 cat,chimp,cow,dog,elephant,guinea_pig,horse,human,macaque,marmoset,mouse,orangutan,panda,pig,rabbit,rat, processed_transcript processed_transcript A549@8.17084,AG04450@2.83846,BJ@3.28933,GM12878@16.3151,H1HESC@3.19794,HELAS3@2.80383,HEPG2@3.9793,HMEC@0.836228,HSMM@1.72588,HUVEC@1.64508,K562@15.8808,MCF7@3.18343,NHEK@5.65039,NHLF@1.33898,SKNSHRA@16.1967, 0 0 0 0 ENSG00000223745.1 ENST00000447577.1 chr1:93730208-93806029 5 426 75387 exonic 4.26 1 0,1,1 0 0,0,0 88.7323943661972 2.77279902370435 0 115.863849765258 7.62669956358523 5.52 107.744131455399 15.0680621327285 5.78 0 0 cat,chimp,cow,dog,elephant,guinea_pig,horse,human,macaque,marmoset,mouse,orangutan,pig,rabbit, processed_transcript processed_transcript A549@8.17084,AG04450@2.83846,BJ@3.28933,GM12878@16.3151,H1HESC@3.19794,HELAS3@2.80383,HEPG2@3.9793,HMEC@0.836228,HSMM@1.72588,HUVEC@1.64508,K562@15.8808,MCF7@3.18343,NHEK@5.65039,NHLF@1.33898,SKNSHRA@16.1967, 0 0 0 0 ENSG00000223745.1 ENST00000442860.1 chr1:93730226-93775320 4 354 44734 exonic -9.53 1 0,0,1 0 0,0,0 106.779661016949 3.9877945187106 0 139.429378531073 8.2668440112666 0 119.361581920904 13.552309205526 0 0 0 cat,chimp,cow,dog,elephant,guinea_pig,horse,human,macaque,marmoset,mouse,orangutan,pig,rabbit, processed_transcript processed_transcript A549@8.17084,AG04450@2.83846,BJ@3.28933,GM12878@16.3151,H1HESC@3.19794,HELAS3@2.80383,HEPG2@3.9793,HMEC@0.836228,HSMM@1.72588,HUVEC@1.64508,K562@15.8808,MCF7@3.18343,NHEK@5.65039,NHLF@1.33898,SKNSHRA@16.1967, 0 0 0 0 ENSG00000223745.1 ENST00000414430.1 chr1:93730229-93780826 4 423 50168 exonic -9.94 1 0,0,1 0 0,0,0 89.3617021276596 3.55585233615053 0 116.685579196217 7.37141205549354 0 99.8912529550827 12.0843764949769 0 0 0 chimp,dog,guinea_pig,horse,human,macaque,marmoset,mouse,orangutan,pig, processed_transcript processed_transcript A549@8.17084,AG04450@2.83846,BJ@3.28933,GM12878@16.3151,H1HESC@3.19794,HELAS3@2.80383,HEPG2@3.9793,HMEC@0.836228,HSMM@1.72588,HUVEC@1.64508,K562@15.8808,MCF7@3.18343,NHEK@5.65039,NHLF@1.33898,SKNSHRA@16.1967, 0 0 0 0 ENSG00000223745.1 ENST00000424517.1 chr1:93730233-93790207 4 258 59710 exonic 4.26 1 1,1,1 0 0,0,0 146.511627906977 2.98760676603584 0 191.31007751938 7.47509629877742 11.27 163.77519379845 11.829492547312 80.532 0 0 cat,chimp,dog,elephant,horse,human,macaque,marmoset,mouse,orangutan,pig,rabbit, processed_transcript processed_transcript A549@8.17084,AG04450@2.83846,BJ@3.28933,GM12878@16.3151,H1HESC@3.19794,HELAS3@2.80383,HEPG2@3.9793,HMEC@0.836228,HSMM@1.72588,HUVEC@1.64508,K562@15.8808,MCF7@3.18343,NHEK@5.65039,NHLF@1.33898,SKNSHRA@16.1967, 0 0 0 0 ENSG00000223745.1 ENST00000429859.1 chr1:93730233-93802949 5 413 72295 exonic 4.26 1 1,1,1 0 0,0,0 91.5254237288136 2.89138944601978 0 119.510895883777 7.83296216889135 0 162.590799031477 14.907268829103 0 0 0 cat,chimp,guinea_pig,horse,human,macaque,marmoset,mouse,orangutan,panda,pig,rat, processed_transcript processed_transcript A549@8.17084,AG04450@2.83846,BJ@3.28933,GM12878@16.3151,H1HESC@3.19794,HELAS3@2.80383,HEPG2@3.9793,HMEC@0.836228,HSMM@1.72588,HUVEC@1.64508,K562@15.8808,MCF7@3.18343,NHEK@5.65039,NHLF@1.33898,SKNSHRA@16.1967, 0 0 0 0 ENSG00000223745.1 ENST00000427669.1 chr1:93730234-93780825 5 378 50205 exonic 4.26 1 0,0,1 0 0,0,0 100 3.55323174982572 0 130.57671957672 7.36597948411513 0 111.783068783069 12.0754705706603 0 0 0 cat,chimp,guinea_pig,horse,human,macaque,marmoset,mouse,orangutan,pig, processed_transcript processed_transcript A549@8.17084,AG04450@2.83846,BJ@3.28933,GM12878@16.3151,H1HESC@3.19794,HELAS3@2.80383,HEPG2@3.9793,HMEC@0.836228,HSMM@1.72588,HUVEC@1.64508,K562@15.8808,MCF7@3.18343,NHEK@5.65039,NHLF@1.33898,SKNSHRA@16.1967, 0 0 0 0 ENSG00000223745.1 ENST00000450843.1 chr1:93770668-93804931 4 596 33661 intergenic 2.40 0 0,1,0 0 0,0,0 0 0.910341344582752 0 0 6.09444163869166 0 41.7718120805369 14.2723626749057 20.427 0 0 chimp,horse,human,macaque,marmoset,orangutan, processed_transcript processed_transcript A549@8.17084,AG04450@2.83846,BJ@3.28933,GM12878@16.3151,H1HESC@3.19794,HELAS3@2.80383,HEPG2@3.9793,HMEC@0.836228,HSMM@1.72588,HUVEC@1.64508,K562@15.8808,MCF7@3.18343,NHEK@5.65039,NHLF@1.33898,SKNSHRA@16.1967, 0 0 0 0 ENSG00000223745.1 ENST00000440778.1 chr1:93775310-93804091 6 590 28181 intergenic -5.98 0 0,1,0 0 0,0,0 0 1.08736382669174 0 4.32203389830508 6.97189595826976 6.12 46.5864406779661 16.7301373265675 10.005 0 0 chimp,elephant,human,macaque,marmoset,orangutan, processed_transcript processed_transcript A549@8.17084,AG04450@2.83846,BJ@3.28933,GM12878@16.3151,H1HESC@3.19794,HELAS3@2.80383,HEPG2@3.9793,HMEC@0.836228,HSMM@1.72588,HUVEC@1.64508,K562@15.8808,MCF7@3.18343,NHEK@5.65039,NHLF@1.33898,SKNSHRA@16.1967, 0 0 0 0 ENSG00000223745.1 ENST00000421202.1 chr1:93776726-93811368 9 2964 31662 intergenic 1.21 0 1,1,1 1 0,0,0 0 1.62930326574443 149.665 1.60526315789474 6.99106184069231 245.415 10.830971659919 16.4679742277809 214.388 0 0 chimp,human,macaque,marmoset,orangutan, processed_transcript processed_transcript A549@8.17084,AG04450@2.83846,BJ@3.28933,GM12878@16.3151,H1HESC@3.19794,HELAS3@2.80383,HEPG2@3.9793,HMEC@0.836228,HSMM@1.72588,HUVEC@1.64508,K562@15.8808,MCF7@3.18343,NHEK@5.65039,NHLF@1.33898,SKNSHRA@16.1967, 0 0 0 0 ENSG00000223745.1 ENST00000436200.1 chr1:93776837-93802994 4 488 25663 intergenic -9.27 0 0,1,0 0 0,0,0 0 1.19405369598254 0 0.625 7.6321942095624 0 16.422131147541 19.0169894400499 0 0 0 chimp,human,macaque,orangutan, processed_transcript processed_transcript A549@8.17084,AG04450@2.83846,BJ@3.28933,GM12878@16.3151,H1HESC@3.19794,HELAS3@2.80383,HEPG2@3.9793,HMEC@0.836228,HSMM@1.72588,HUVEC@1.64508,K562@15.8808,MCF7@3.18343,NHEK@5.65039,NHLF@1.33898,SKNSHRA@16.1967, 0 0 0 0 ENSG00000223745.1 ENST00000432741.1 chr1:93777042-93803122 4 531 25543 intergenic -6.32 0 0,1,1 0 0,0,0 0 1.19966331284501 0 0 7.69193125318091 2.55 46.8851224105461 18.4579728301296 2.59 0 0 chimp,human,macaque,orangutan, processed_transcript processed_transcript A549@8.17084,AG04450@2.83846,BJ@3.28933,GM12878@16.3151,H1HESC@3.19794,HELAS3@2.80383,HEPG2@3.9793,HMEC@0.836228,HSMM@1.72588,HUVEC@1.64508,K562@15.8808,MCF7@3.18343,NHEK@5.65039,NHLF@1.33898,SKNSHRA@16.1967, 0 0 0 0 ENSG00000223745.1 ENST00000411670.1 chr1:93790263-93811360 8 667 20416 intergenic -3.44 0 1,1,1 1 0,0,0 0 2.52679271159875 145.737 3.31034482758621 7.21845611285266 241.375 44.2473763118441 20.7635677899686 209.788 0 0 chimp,human,macaque,marmoset,orangutan, processed_transcript processed_transcript A549@8.17084,AG04450@2.83846,BJ@3.28933,GM12878@16.3151,H1HESC@3.19794,HELAS3@2.80383,HEPG2@3.9793,HMEC@0.836228,HSMM@1.72588,HUVEC@1.64508,K562@15.8808,MCF7@3.18343,NHEK@5.65039,NHLF@1.33898,SKNSHRA@16.1967, 0 0 0 0 ENSG00000223745.1 ENST00000452347.1 chr1:93804252-93811405 5 964 6181 intergenic -3.44 0 0,1,0 1 0,0,0 0 3.38844847112118 167.832 3.6545643153527 4.02459149005015 262.785 6.26244813278008 8.07911341206924 232.569 0 0 chimp,human,macaque,marmoset,orangutan,panda, processed_transcript processed_transcript A549@8.17084,AG04450@2.83846,BJ@3.28933,GM12878@16.3151,H1HESC@3.19794,HELAS3@2.80383,HEPG2@3.9793,HMEC@0.836228,HSMM@1.72588,HUVEC@1.64508,K562@15.8808,MCF7@3.18343,NHEK@5.65039,NHLF@1.33898,SKNSHRA@16.1967, 0 0 0 0 ENSG00000223745.1 ENST00000438777.1 chr1:93804472-93811357 6 746 6129 intergenic -3.44 0 0,1,0 1 0,0,0 0 3.41719693261543 144.264 2.9597855227882 4.05873715124816 239.86 6.18900804289544 8.14765867188775 208.063 0 0 chimp,human,macaque,orangutan,panda, processed_transcript processed_transcript A549@8.17084,AG04450@2.83846,BJ@3.28933,GM12878@16.3151,H1HESC@3.19794,HELAS3@2.80383,HEPG2@3.9793,HMEC@0.836228,HSMM@1.72588,HUVEC@1.64508,K562@15.8808,MCF7@3.18343,NHEK@5.65039,NHLF@1.33898,SKNSHRA@16.1967, 0 0 0 0 ENSG00000223745.1 ENST00000449305.1 chr1:93804486-93811340 5 743 6103 intergenic -3.44 0 0,1,0 1 0,0,0 0 3.43175487465181 135.917 0.742934051144011 4.07602818286089 231.128 5.55989232839838 8.18236932656071 197.938 0 0 chimp,human,macaque,orangutan, processed_transcript processed_transcript A549@8.17084,AG04450@2.83846,BJ@3.28933,GM12878@16.3151,H1HESC@3.19794,HELAS3@2.80383,HEPG2@3.9793,HMEC@0.836228,HSMM@1.72588,HUVEC@1.64508,K562@15.8808,MCF7@3.18343,NHEK@5.65039,NHLF@1.33898,SKNSHRA@16.1967, 0 0 0 0 ENSG00000223745.1 ENST00000457387.1 chr1:93804495-93811403 4 802 6100 intergenic -3.44 0 0,1,0 1 0,0,0 0 3.43344262295082 166.85 12.0236907730673 3.07475409836066 261.775 15.4576059850374 7.14377049180328 232.256 0 0 chimp,human,macaque,orangutan,panda, processed_transcript processed_transcript A549@8.17084,AG04450@2.83846,BJ@3.28933,GM12878@16.3151,H1HESC@3.19794,HELAS3@2.80383,HEPG2@3.9793,HMEC@0.836228,HSMM@1.72588,HUVEC@1.64508,K562@15.8808,MCF7@3.18343,NHEK@5.65039,NHLF@1.33898,SKNSHRA@16.1967, 0 0 0 0 ENSG00000223745.1 ENST00000445076.1 chr1:93804496-93811384 3 617 6267 intergenic -4.07 0 0,1,0 1 0,0,0 0 3.34194989628211 157.521 3.57860615883306 3.96936333173767 253.495 7.48298217179903 7.96824636987394 223.588 0 0 chimp,human,macaque,marmoset,orangutan, processed_transcript processed_transcript A549@8.17084,AG04450@2.83846,BJ@3.28933,GM12878@16.3151,H1HESC@3.19794,HELAS3@2.80383,HEPG2@3.9793,HMEC@0.836228,HSMM@1.72588,HUVEC@1.64508,K562@15.8808,MCF7@3.18343,NHEK@5.65039,NHLF@1.33898,SKNSHRA@16.1967, 0 0 0 0 ENSG00000224093.1 ENST00000431770.1 chr1:94057756-94060341 2 720 1863 exonic 13.67 1 1,1,1 0 0,0,0 82.225 0 0 115.804166666667 2.3113258185722 0.717 110.934722222222 2.04991948470209 0.729 0 0 cat,chimp,cow,dog,elephant,horse,human,macaque,marmoset,orangutan,panda,pig,rabbit, antisense antisense A549@0.102967,AG04450@0.0181255,BJ@0.00341,GM12878@0.073177,H1HESC@0.036415,HELAS3@17.2881,HEPG2@30.5406,HMEC@0,HSMM@0,HUVEC@0.0338385,K562@0.0138745,MCF7@0.12461,NHEK@0,NHLF@0,SKNSHRA@0.123482, 0 0 0 0 ENSG00000224093.1 ENST00000427243.1 chr1:94057807-94067997 3 636 9550 exonic 13.67 0 0,1,0 0 0,0,0 93.0849056603774 6.16753926701571 0 131.099056603774 5.98869109947644 0.717 125.586477987421 6.6103664921466 0.729 0 0 cat,chimp,dog,guinea_pig,human,macaque,marmoset,mouse,orangutan, antisense antisense A549@0.102967,AG04450@0.0181255,BJ@0.00341,GM12878@0.073177,H1HESC@0.036415,HELAS3@17.2881,HEPG2@30.5406,HMEC@0,HSMM@0,HUVEC@0.0338385,K562@0.0138745,MCF7@0.12461,NHEK@0,NHLF@0,SKNSHRA@0.123482, 0 0 0 0 ENSG00000224093.1 ENST00000417401.1 chr1:94057807-94071130 3 501 12818 exonic 13.67 0 1,1,1 0 0,0,0 118.167664670659 7.6472928694024 0 179.209580838323 9.42596348884381 0.717 172.714570858283 10.7051022000312 0.729 0 0 cat,chimp,cow,dog,horse,human,macaque,orangutan,panda,pig,rabbit, antisense antisense A549@0.102967,AG04450@0.0181255,BJ@0.00341,GM12878@0.073177,H1HESC@0.036415,HELAS3@17.2881,HEPG2@30.5406,HMEC@0,HSMM@0,HUVEC@0.0338385,K562@0.0138745,MCF7@0.12461,NHEK@0,NHLF@0,SKNSHRA@0.123482, 0 0 0 0 ENSG00000224093.1 ENST00000412628.1 chr1:94059942-94066319 2 170 6205 intronic 0.50 0 0,0,0 0 0,0,0 0 2.48509266720387 0 0 6.36051571313457 1.578 0 6.5535858178888 1.632 0 0 chimp,guinea_pig,human,macaque,orangutan, antisense antisense A549@0.102967,AG04450@0.0181255,BJ@0.00341,GM12878@0.073177,H1HESC@0.036415,HELAS3@17.2881,HEPG2@30.5406,HMEC@0,HSMM@0,HUVEC@0.0338385,K562@0.0138745,MCF7@0.12461,NHEK@0,NHLF@0,SKNSHRA@0.123482, 0 0 0 0 ENSG00000224093.1 ENST00000446684.1 chr1:94059947-94065297 3 711 4635 intronic 3.34 1 0,0,1 0 0,0,0 0 3.32686084142395 0 0 8.51499460625674 1.578 0 8.77346278317152 1.632 0 0 chimp,cow,dog,human,macaque,marmoset,orangutan,panda,pig, antisense antisense A549@0.102967,AG04450@0.0181255,BJ@0.00341,GM12878@0.073177,H1HESC@0.036415,HELAS3@17.2881,HEPG2@30.5406,HMEC@0,HSMM@0,HUVEC@0.0338385,K562@0.0138745,MCF7@0.12461,NHEK@0,NHLF@0,SKNSHRA@0.123482, 0 0 0 0 ENSG00000230439.2 ENST00000433544.1 chr1:94218480-94241000 2 1669 20849 intronic 1.97 1 1,1,1 0 0,0,0 15.4535650089874 13.4338337570147 0 19.8382264829239 13.259580795242 0 20.264230077891 13.0928102067245 0 0 0 chimp,horse,human,macaque,marmoset,orangutan,pig, lincRNA processed_transcript A549@0.449744,AG04450@0.0876435,BJ@0.0783475,GM12878@0.0236215,H1HESC@0.4102,HELAS3@2.07539,HEPG2@0.245866,HMEC@23.7858,HSMM@0.141412,HUVEC@0.162391,K562@0.0653345,MCF7@0.0316625,NHEK@2.46466,NHLF@0.051548,SKNSHRA@0.218064, 0 0 0 0 ENSG00000233482.1 ENST00000439455.1 chr1:94610667-94611175 2 350 156 intergenic -2.84 0 0,0,0 0 0,0,0 10.6857142857143 0 0 19.2228571428571 0 56.349 14.8 0 39.668 0 0 cat,chimp,dog,horse,human,marmoset,orangutan,panda,pig,rabbit, antisense antisense A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000231363.1 ENST00000413103.1 chr1:94713464-94715048 2 210 1372 intergenic 0 0 0,1,0 0 0,0,0 0 0 0 0 1.56778425655977 18.426 0 1.69897959183673 9.784 0 0 chimp,horse,human,macaque,orangutan, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0.131887,K562@0,MCF7@0,NHEK@0,NHLF@0.0092035,SKNSHRA@0, 0 0 0 0 ENSG00000236098.1 ENST00000414039.1 chr1:94784035-94790125 2 590 5498 intergenic -3.79 0 0,0,0 0 0,0,0 0 11.4368861404147 0 0 26.0953073845035 0 0 28.2455438341215 0 0 0 chimp,human,macaque,marmoset,orangutan, lincRNA lincRNA A549@0.167125,AG04450@0.0613455,BJ@0.0605535,GM12878@0,H1HESC@0,HELAS3@0.061856,HEPG2@0.073428,HMEC@0.560244,HSMM@0.222139,HUVEC@1.66741,K562@0,MCF7@0.201517,NHEK@0.633813,NHLF@0.068739,SKNSHRA@0.122131, 0 0 0 0 ENSG00000226835.1 ENST00000418242.1 chr1:94798823-94800404 2 478 1101 intergenic 0.66 1 1,1,1 0 0,0,0 2.59414225941423 17.794732061762 0 281.110878661088 45.5731153496821 0 270.728033472803 48.3887375113533 0 0 0 chimp,dog,elephant,horse,human,macaque,marmoset,orangutan,panda, lincRNA lincRNA A549@0.0057545,AG04450@0.0506385,BJ@0.208617,GM12878@0.0228915,H1HESC@0.005155,HELAS3@0,HEPG2@0.036262,HMEC@0.017061,HSMM@0.702685,HUVEC@0.130379,K562@0,MCF7@0,NHEK@0.032605,NHLF@0.290616,SKNSHRA@0.0331285, 0 0 0 0 ENSG00000223675.1 ENST00000413541.1 chr1:95051112-95057853 2 2169 4570 intergenic 0.99 0 0,0,0 0 0,0,0 0 12.5382932166302 0 2.13093591516828 15.3140043763676 18.546 2.20239741816505 21.9592997811816 16.067 0 0 chimp,human,macaque,marmoset,orangutan, lincRNA lincRNA A549@0,AG04450@0.004339,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0.0052305, 0 0 0 0 ENSG00000235565.1 ENST00000435559.1 chr1:95086707-95089740 2 2270 761 intergenic 4.00 0 0,0,0 0 0,0,0 0 0 0 4.32334801762115 0 0 6.21762114537445 0 0 0 0 cat,chimp,cow,elephant,horse,human,macaque,marmoset,orangutan,panda,rabbit, lincRNA lincRNA A549@0.319869,AG04450@0.178909,BJ@0.0344265,GM12878@0,H1HESC@0.385617,HELAS3@0.275191,HEPG2@0.276456,HMEC@0.045055,HSMM@0.0636245,HUVEC@0.0099995,K562@0,MCF7@0.0360375,NHEK@0.285351,NHLF@0.226991,SKNSHRA@0.914752, 0 0 0 0 ENSG00000224081.2 ENST00000442418.1 chr1:95104017-95285652 5 743 180884 intergenic -4.52 0 0,1,0 1 0,0,0 0 1.65131797173879 22.26 4.50336473755047 3.80871166051171 39.953 4.57873485868102 4.78174410119193 46.79 0 0 cat,chimp,horse,human,macaque,marmoset,orangutan, processed_transcript processed_transcript A549@0.717977,AG04450@0.572266,BJ@0.186418,GM12878@0,H1HESC@0.7718,HELAS3@0.445152,HEPG2@0.99361,HMEC@0.27649,HSMM@0.179333,HUVEC@0.117882,K562@0,MCF7@0.113463,NHEK@0.302437,NHLF@0.330201,SKNSHRA@2.41665, 0 0 0 0 ENSG00000224081.2 ENST00000452922.1 chr1:95123089-95285837 5 1326 161414 intergenic -2.25 0 0,1,1 1 0,0,0 0 1.56292514899575 22.26 2.52337858220211 3.69149516151015 39.953 2.56561085972851 4.2057999925657 46.79 0 0 chimp,human,marmoset,orangutan, processed_transcript processed_transcript A549@0.717977,AG04450@0.572266,BJ@0.186418,GM12878@0,H1HESC@0.7718,HELAS3@0.445152,HEPG2@0.99361,HMEC@0.27649,HSMM@0.179333,HUVEC@0.117882,K562@0,MCF7@0.113463,NHEK@0.302437,NHLF@0.330201,SKNSHRA@2.41665, 0 0 0 0 ENSG00000224081.2 ENST00000456551.1 chr1:95123481-95123806 2 174 149 intergenic 0 0 0,0,0 0 0,0,0 0 0 0 0 35.6375838926174 4.749 0 37.1812080536913 4.903 0 0 chimp,human,marmoset,orangutan, processed_transcript processed_transcript A549@0.717977,AG04450@0.572266,BJ@0.186418,GM12878@0,H1HESC@0.7718,HELAS3@0.445152,HEPG2@0.99361,HMEC@0.27649,HSMM@0.179333,HUVEC@0.117882,K562@0,MCF7@0.113463,NHEK@0.302437,NHLF@0.330201,SKNSHRA@2.41665, 0 0 0 0 ENSG00000224081.2 ENST00000432162.1 chr1:95138453-95197901 3 643 58801 intergenic 2.46 0 0,0,1 0 0,0,0 0 2.15759936055509 0 6.31104199066874 4.0682641451676 0 6.3950233281493 4.51141987381167 0 0 0 chimp,guinea_pig,human,macaque,marmoset,orangutan, processed_transcript processed_transcript A549@0.717977,AG04450@0.572266,BJ@0.186418,GM12878@0,H1HESC@0.7718,HELAS3@0.445152,HEPG2@0.99361,HMEC@0.27649,HSMM@0.179333,HUVEC@0.117882,K562@0,MCF7@0.113463,NHEK@0.302437,NHLF@0.330201,SKNSHRA@2.41665, 0 0 0 0 ENSG00000224081.2 ENST00000421997.1 chr1:95138685-95285775 4 705 146379 intergenic -3.22 0 0,1,1 1 0,0,0 0 1.59871293013342 22.26 4.74609929078014 3.71666700824572 39.953 4.82553191489362 4.28153628594266 46.79 0 0 chimp,human,macaque,marmoset,orangutan, processed_transcript processed_transcript A549@0.717977,AG04450@0.572266,BJ@0.186418,GM12878@0,H1HESC@0.7718,HELAS3@0.445152,HEPG2@0.99361,HMEC@0.27649,HSMM@0.179333,HUVEC@0.117882,K562@0,MCF7@0.113463,NHEK@0.302437,NHLF@0.330201,SKNSHRA@2.41665, 0 0 0 0 ENSG00000224081.2 ENST00000414374.1 chr1:95144981-95285766 2 436 140347 intergenic -3.22 0 0,1,1 1 0,0,0 0 1.66742431259664 22.26 7.6743119266055 3.50004631377942 39.953 7.80275229357798 4.04875059673524 46.79 0 0 chimp,human,macaque,marmoset,orangutan,panda, processed_transcript processed_transcript A549@0.717977,AG04450@0.572266,BJ@0.186418,GM12878@0,H1HESC@0.7718,HELAS3@0.445152,HEPG2@0.99361,HMEC@0.27649,HSMM@0.179333,HUVEC@0.117882,K562@0,MCF7@0.113463,NHEK@0.302437,NHLF@0.330201,SKNSHRA@2.41665, 0 0 0 0 ENSG00000224081.2 ENST00000418366.1 chr1:95170995-95285775 5 864 113908 intergenic -3.22 0 0,1,0 1 0,0,0 0 1.46074024651473 22.26 0 3.53901394107526 39.953 0 4.10346068757243 46.79 0 0 chimp,horse,human,macaque,marmoset,orangutan, processed_transcript processed_transcript A549@0.717977,AG04450@0.572266,BJ@0.186418,GM12878@0,H1HESC@0.7718,HELAS3@0.445152,HEPG2@0.99361,HMEC@0.27649,HSMM@0.179333,HUVEC@0.117882,K562@0,MCF7@0.113463,NHEK@0.302437,NHLF@0.330201,SKNSHRA@2.41665, 0 0 0 0 ENSG00000224081.2 ENST00000424711.1 chr1:95197689-95208051 2 530 9830 intergenic -2.72 0 0,0,0 0 0,0,0 0 0 0 0 7.70488301119023 0 0 8.73255340793489 0 0 0 chimp,elephant,horse,human,macaque,orangutan, processed_transcript processed_transcript A549@0.717977,AG04450@0.572266,BJ@0.186418,GM12878@0,H1HESC@0.7718,HELAS3@0.445152,HEPG2@0.99361,HMEC@0.27649,HSMM@0.179333,HUVEC@0.117882,K562@0,MCF7@0.113463,NHEK@0.302437,NHLF@0.330201,SKNSHRA@2.41665, 0 0 0 0 ENSG00000237416.2 ENST00000422162.1 chr1:95302304-95320982 4 693 17979 intronic 2.16 0 0,0,0 0 0,0,0 18.1717171717172 9.74587018187886 0 0 11.5198843094722 0 0 14.4177095500306 0 0 0 chimp,horse,human,macaque,marmoset,orangutan, antisense antisense A549@0.013899,AG04450@0.011503,BJ@0,GM12878@0,H1HESC@0,HELAS3@0.011411,HEPG2@0.0081425,HMEC@0.030557,HSMM@0.0323665,HUVEC@0,K562@0,MCF7@0,NHEK@0.0107763,NHLF@0,SKNSHRA@0.0579205, 0 0 0 0 ENSG00000237416.2 ENST00000532087.1 chr1:95308664-95320982 2 668 11648 intronic 2.16 0 0,0,1 0 0,0,0 18.8517964071856 2.38470123626374 0 0 5.3829842032967 0 0 7.34975961538462 0 0 0 chimp,horse,human,macaque,marmoset,orangutan, antisense retained_intron A549@0.013899,AG04450@0.011503,BJ@0,GM12878@0,H1HESC@0,HELAS3@0.011411,HEPG2@0.0081425,HMEC@0.030557,HSMM@0.0323665,HUVEC@0,K562@0,MCF7@0,NHEK@0.0107763,NHLF@0,SKNSHRA@0.0579205, 0 0 0 0 ENSG00000235501.1 ENST00000452846.1 chr1:95393122-95428826 4 514 35184 intergenic -2.03 0 0,1,1 1 0,0,0 12.5291828793774 4.92772282855844 0 39.6692607003891 7.25440541155071 57.038 53.591439688716 7.86448385629832 56.596 0 0 chimp,human,macaque,orangutan, antisense antisense A549@0.534311,AG04450@0.72268,BJ@0.443275,GM12878@0.012108,H1HESC@0.960464,HELAS3@0.243511,HEPG2@2.46717,HMEC@0.051613,HSMM@2.50346,HUVEC@0.339899,K562@0,MCF7@0.0021595,NHEK@0.0326187,NHLF@1.20095,SKNSHRA@2.33098, 0 0 0 0 ENSG00000235501.1 ENST00000438509.1 chr1:95393584-95428826 4 948 34288 intergenic 5.61 0 0,1,1 0 0,0,0 6.79324894514768 5.05649206719552 0 45.4018987341772 6.69047480167989 17.087 57.6772151898734 7.1842918805413 13.802 0 0 chimp,human,macaque,rabbit, antisense antisense A549@0.534311,AG04450@0.72268,BJ@0.443275,GM12878@0.012108,H1HESC@0.960464,HELAS3@0.243511,HEPG2@2.46717,HMEC@0.051613,HSMM@2.50346,HUVEC@0.339899,K562@0,MCF7@0.0021595,NHEK@0.0326187,NHLF@1.20095,SKNSHRA@2.33098, 0 0 0 0 ENSG00000235501.1 ENST00000456582.1 chr1:95426881-95428826 2 399 1544 intergenic -2.03 0 0,0,1 0 0,0,0 16.140350877193 0 0 97.1704260651629 10.7551813471503 0 115.09022556391 14.0485751295337 0 0 0 cat,chimp,cow,dog,elephant,guinea_pig,horse,human,macaque,marmoset,orangutan,panda,pig,rabbit,rat, antisense antisense A549@0.534311,AG04450@0.72268,BJ@0.443275,GM12878@0.012108,H1HESC@0.960464,HELAS3@0.243511,HEPG2@2.46717,HMEC@0.051613,HSMM@2.50346,HUVEC@0.339899,K562@0,MCF7@0.0021595,NHEK@0.0326187,NHLF@1.20095,SKNSHRA@2.33098, 0 0 0 0 ENSG00000230427.1 ENST00000451611.1 chr1:95527152-95533101 2 1094 4853 intronic 0.38 0 0,0,0 0 0,0,0 8.73857404021938 24.7158458685349 0 0 30.5400783020812 0 2.62888482632541 36.3758499896971 0 0 0 chimp,dog,elephant,human,macaque, antisense antisense A549@0.007922,AG04450@0,BJ@0.0044925,GM12878@0,H1HESC@0.0106215,HELAS3@0.004265,HEPG2@0.011664,HMEC@0,HSMM@0.0116695,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0.0106815,SKNSHRA@0.0165895, 0 0 0 0 ENSG00000231992.1 ENST00000434207.1 chr1:95585703-95604110 2 418 17987 intronic -0.14 0 0,0,0 0 0,0,0 61.7224880382775 1.02740868404959 17.88 12.5933014354067 3.81508867515428 14.131 16.5239234449761 5.05415021960305 15.049 0 0 cat,chimp,cow,elephant,guinea_pig,horse,human,macaque,marmoset,orangutan,panda,pig,rabbit, processed_transcript processed_transcript A549@0.145945,AG04450@0.013711,BJ@0,GM12878@0,H1HESC@0.0372245,HELAS3@0.224019,HEPG2@0.101308,HMEC@0,HSMM@0,HUVEC@0,K562@0.149291,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0.017354, 0 0 0 0 ENSG00000226026.1 ENST00000421762.1 chr1:95628775-95699538 4 2443 68314 intronic 3.99 0 0,1,0 1 0,0,0 5.49324600900532 9.0796176479199 23.643 1.76094965206713 10.6177357496267 42.001 1.84936553417929 12.5116520771731 40.332 0 0 chimp,human,macaque,marmoset,orangutan, antisense antisense A549@0.039745,AG04450@0.005829,BJ@0.0241025,GM12878@0.005087,H1HESC@0.007271,HELAS3@0.036485,HEPG2@0.06784,HMEC@0,HSMM@0.0147485,HUVEC@0,K562@0.01928,MCF7@0.036449,NHEK@0.006714,NHLF@0.005546,SKNSHRA@0.051703, 64 2 0 0 ENSG00000226026.1 ENST00000419846.1 chr1:95639680-95699535 4 518 59331 intronic -3.21 0 0,1,0 1 0,0,0 0 9.99747181068919 23.643 0 11.8506177209216 42.001 0 13.6205019298512 40.332 0 0 chimp,dog,guinea_pig,horse,human,macaque,marmoset,orangutan,rabbit, antisense antisense A549@0.039745,AG04450@0.005829,BJ@0.0241025,GM12878@0.005087,H1HESC@0.007271,HELAS3@0.036485,HEPG2@0.06784,HMEC@0,HSMM@0.0147485,HUVEC@0,K562@0.01928,MCF7@0.036449,NHEK@0.006714,NHLF@0.005546,SKNSHRA@0.051703, 0 0 0 0 ENSG00000228852.1 ENST00000444665.1 chr1:95708781-95729610 2 369 20458 intronic -3.86 0 0,0,0 0 0,0,0 65.4471544715447 37.6742594584026 0 110.024390243902 24.4610910157396 9.81 118.70189701897 25.4383615211653 12.881 0 0 cat,chimp,cow,dog,elephant,horse,human,macaque,marmoset,mouse,opossum,orangutan,panda,pig,rabbit,rat, antisense antisense A549@0,AG04450@0,BJ@0,GM12878@0.012636,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000228504.1 ENST00000423410.1 chr1:95776484-95783819 2 380 6953 intergenic 1.97 0 0,0,0 0 0,0,0 324.052631578947 88.7625485401985 0 408.205263157895 118.954120523515 7.077 424.494736842105 116.051344743276 21.255 0 0 cat,chimp,cow,dog,elephant,guinea_pig,horse,human,macaque,marmoset,mouse,opossum,orangutan,panda,platypus,rabbit,rat, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0.017818, 0 0 0 0 ENSG00000230434.1 ENST00000438093.1 chr1:95816807-95817810 2 600 401 intergenic -0.91 0 0,1,0 0 0,0,0 0 0 0 0 46.1246882793018 18.57 0 47.3615960099751 20.39 0 0 cat,chimp,cow,dog,guinea_pig,horse,human,macaque,marmoset,orangutan,panda,rabbit, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0.0280895, 0 0 0 0 ENSG00000237954.1 ENST00000426881.1 chr1:95821575-95846556 3 1010 23967 intergenic 1.03 0 0,0,0 0 0,0,0 150.388118811881 38.1043100930446 0 184.684158415842 32.8902657821171 6.936 174.837623762376 34.6194350565361 7.2 0 0 chimp,human,macaque,marmoset,orangutan, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0.002048,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0.112188, 0 0 0 0 ENSG00000237954.1 ENST00000427695.1 chr1:95821791-95846528 4 841 23890 intergenic 1.03 0 0,0,0 0 0,0,0 65.2366230677765 38.2271243197991 0 60.2128418549346 32.9962745918794 6.936 54.8311533888228 34.4701967350356 7.2 0 0 chimp,human,macaque,marmoset,orangutan, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0.002048,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0.112188, 0 0 0 0 ENSG00000233907.1 ENST00000424943.1 chr1:95940293-95944912 4 2751 1862 intergenic -1.82 0 0,0,0 0 0,0,0 0 23.8399570354458 0 0.802617230098146 47.5397422126745 10.468 1.75099963649582 51.1799140708915 11.245 0 0 chimp,human,macaque,orangutan, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0.012362,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0.0144705, 0 0 0 0 ENSG00000228971.1 ENST00000440116.1 chr1:95975716-95980285 2 780 3787 intergenic 1.83 0 0,0,1 0 0,0,0 29.4641025641026 137.400580934777 61.777 49.5038461538462 183.225772379192 63.701 55.5884615384615 195.860839714814 74.866 0 0 cat,chimp,cow,dog,guinea_pig,horse,human,macaque,marmoset,mouse,orangutan,panda,pig,rabbit, lincRNA lincRNA A549@0.001918,AG04450@0,BJ@0,GM12878@0.003028,H1HESC@0.036183,HELAS3@0,HEPG2@0,HMEC@0.005687,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0.005078,NHLF@0,SKNSHRA@0.128592, 0 0 0 0 ENSG00000228971.1 ENST00000456933.1 chr1:95975723-96247898 4 710 271459 intergenic -2.39 0 0,0,0 0 0,0,0 28.6323943661972 32.2165004660004 64.43 48.8042253521127 38.7371205228046 67.663 55.1929577464789 38.9662453630199 79.038 0 0 cat,chimp,cow,dog,guinea_pig,horse,human,macaque,marmoset,mouse,orangutan,pig,rabbit,rat, lincRNA lincRNA A549@0.001918,AG04450@0,BJ@0,GM12878@0.003028,H1HESC@0.036183,HELAS3@0,HEPG2@0,HMEC@0.005687,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0.005078,NHLF@0,SKNSHRA@0.128592, 0 0 0 0 ENSG00000228971.1 ENST00000432146.1 chr1:95975726-96088290 2 317 112245 intergenic 1.09 0 0,0,0 0 0,0,0 60.5425867507886 39.0824624704887 65.567 103.952681388013 48.1365049668137 69.361 117.977917981073 48.7841507416811 80.826 0 0 cat,chimp,cow,dog,horse,human,macaque,marmoset,mouse,orangutan,pig,rabbit,rat, lincRNA lincRNA A549@0.001918,AG04450@0,BJ@0,GM12878@0.003028,H1HESC@0.036183,HELAS3@0,HEPG2@0,HMEC@0.005687,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0.005078,NHLF@0,SKNSHRA@0.128592, 0 0 0 0 ENSG00000228971.1 ENST00000411798.1 chr1:95975896-95981020 3 1437 3683 intergenic -2.21 0 0,1,1 0 0,0,0 1.99582463465553 140.436872115124 85.138 15.4808629088379 184.743144175944 93.128 25.758524704245 193.659245180559 109.23 0 0 chimp,human,macaque,marmoset,orangutan, lincRNA lincRNA A549@0.001918,AG04450@0,BJ@0,GM12878@0.003028,H1HESC@0.036183,HELAS3@0,HEPG2@0,HMEC@0.005687,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0.005078,NHLF@0,SKNSHRA@0.128592, 0 0 0 0 ENSG00000237435.1 ENST00000442558.1 chr1:96403457-96488422 2 477 84486 intergenic 1.53 1 0,0,0 0 0,0,0 0 29.9094169448193 0 3.85953878406709 34.9846956892266 30.466 14.9559748427673 37.8451696139005 32.742 0 0 cat,chimp,dog,elephant,guinea_pig,horse,human,macaque,marmoset,mouse,orangutan,panda,pig,rabbit, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0.127728,NHEK@0,NHLF@0,SKNSHRA@0.0097165, 0 0 0 0 ENSG00000237435.1 ENST00000412513.1 chr1:96455363-96488422 5 856 32195 intergenic 4.30 1 0,0,0 0 0,0,0 0 37.3987886317751 0 0 45.5489672309365 0 1.98714953271028 47.6400372728685 0 0 0 cat,chimp,cow,elephant,guinea_pig,horse,human,macaque,marmoset,orangutan,panda,rabbit, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0.127728,NHEK@0,NHLF@0,SKNSHRA@0.0097165, 0 0 0 0 ENSG00000237435.1 ENST00000451675.1 chr1:96457624-96488422 5 794 29996 intergenic 4.30 1 0,0,0 0 0,0,0 0 37.7195626083478 0 0 45.2703027070276 0 2.14231738035264 47.2367315642086 0 0 0 cat,chimp,cow,elephant,guinea_pig,horse,human,macaque,marmoset,mouse,orangutan,panda,rabbit, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0.127728,NHEK@0,NHLF@0,SKNSHRA@0.0097165, 0 0 0 0 ENSG00000237435.1 ENST00000413825.1 chr1:96458021-96488436 3 464 29947 intergenic -11.97 1 0,0,0 0 0,0,0 0 37.7812802617958 0 0 45.3443750626106 0 3.66594827586207 47.3140214378736 0 0 0 chimp,elephant,horse,human,macaque,marmoset,orangutan,panda,rabbit, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0.127728,NHEK@0,NHLF@0,SKNSHRA@0.0097165, 0 0 0 0 ENSG00000231987.1 ENST00000435311.1 chr1:96719625-96839681 6 1988 118058 intergenic 6.48 0 0,1,1 0 0,0,0 0 11.0293245692795 0 0 10.1450981720849 0 0.827464788732394 11.766792593471 0 0 0 chimp,cow,dog,elephant,horse,human,macaque,marmoset,orangutan,panda, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0.009404,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0.006141,NHEK@0,NHLF@0.0019355,SKNSHRA@0, 0 0 0 0 ENSG00000232878.1 ENST00000422980.1 chr1:97561479-97788511 5 528 226496 exonic -2.30 1 0,0,0 0 0,0,0 114.090909090909 38.6576672435716 0 125.043560606061 50.0731359494207 0 134.867424242424 52.0577096284261 0 0 0 cat,chimp,cow,dog,elephant,guinea_pig,horse,human,macaque,marmoset,mouse,opossum,orangutan,panda,pig,rabbit,rat, antisense antisense A549@0,AG04450@0.0120995,BJ@0,GM12878@1.0448,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000232542.1 ENST00000424982.1 chr1:97859710-97885697 2 399 25586 intronic -9.19 0 0,1,0 0 0,0,0 0 13.8217775345892 0 0 20.8228718830611 0 0 26.6416399593528 1.944 0 0 human,orangutan, sense_intronic sense_intronic A549@0,AG04450@0.0286815,BJ@0,GM12878@0.0132925,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000235777.1 ENST00000431362.1 chr1:98262477-98263424 2 774 171 intronic -7.49 0 0,0,0 0 0,0,0 6.74418604651163 0 109.185 24.453488372093 13.2397660818713 103.174 29.5813953488372 56 118.82 0 0 cat,chimp,dog,elephant,guinea_pig,horse,human,macaque,marmoset,mouse,orangutan,panda,pig,rabbit,rat, antisense antisense A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000235777.1 ENST00000422259.1 chr1:98262521-98263622 3 785 312 intronic -5.55 0 0,0,0 0 0,0,0 0 0 114.84 1.00509554140127 16.9871794871795 118.556 0.751592356687898 50.4294871794872 135.29 0 0 cat,chimp,cow,dog,elephant,guinea_pig,horse,human,macaque,marmoset,mouse,orangutan,panda,pig,rabbit,rat, antisense antisense A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000231269.1 ENST00000424528.1 chr1:98453556-98515161 5 2376 59221 intergenic 12.92 0 0,0,1 0 0,0,0 148.193181818182 49.2612417892302 462.972 203.758417508417 57.326657773425 492.559 184.452861952862 55.7857179041218 526.146 0 0 chimp,human,macaque,marmoset,orangutan, lincRNA processed_transcript A549@0.186006,AG04450@0.22427,BJ@0.125101,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0.063834,HSMM@0.171602,HUVEC@0.306509,K562@0,MCF7@0,NHEK@0.104741,NHLF@0.187258,SKNSHRA@0.283041, 0 0 0 0 ENSG00000226053.1 ENST00000418344.1 chr1:98676303-98738214 3 2226 59681 intergenic 4.79 0 0,0,1 0 0,0,0 0 26.9150650960942 37.194 0 25.7372865736164 95.069 0 29.06658735611 145.395 0 0 chimp,human,macaque,marmoset,orangutan, lincRNA processed_transcript A549@0.10529,AG04450@0.303787,BJ@0.0423025,GM12878@0.0023825,H1HESC@0.013222,HELAS3@0,HEPG2@0,HMEC@0.005511,HSMM@0.323454,HUVEC@0.637838,K562@0,MCF7@0,NHEK@0.059223,NHLF@0.172127,SKNSHRA@0.450213, 0 0 0 0 ENSG00000232825.1 ENST00000425113.1 chr1:99469832-99614408 3 2541 142031 exonic 7.57 0 0,1,0 0 0,0,0 45.9374262101535 3.61782286965522 45.059 66.0023612750886 6.00834324900902 18.972 64.2007083825266 8.00845590047243 7.601 0 0 chimp,human,macaque,marmoset,orangutan, processed_transcript processed_transcript A549@0.001006,AG04450@0,BJ@0,GM12878@0.006577,H1HESC@0.002901,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0.0011185,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0.014306, 0 0 0 0 ENSG00000224445.1 ENST00000438829.1 chr1:99937918-99999571 4 491 61156 intergenic -0.29 0 0,0,0 0 0,0,0 0 4.29859703054484 115.632 4.68431771894094 6.63349466937014 12.05 4.94908350305499 8.17421021649552 15.074 0 0 cat,chimp,cow,dog,elephant,guinea_pig,horse,human,macaque,marmoset,orangutan,panda,pig,rabbit, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0.021521,HMEC@0,HSMM@0.0083135,HUVEC@0.10421,K562@0,MCF7@0,NHEK@0.002667,NHLF@0,SKNSHRA@0.0112355, 0 0 0 0 ENSG00000228084.1 ENST00000454219.1 chr1:100433939-100435420 2 653 826 exonic 3.86 1 1,1,1 1 0,0,0 10.9157733537519 0 85.358 15.5222052067381 0 70.696 18.0826952526799 0 60.863 0 0 cat,chimp,guinea_pig,horse,human,macaque,marmoset,orangutan,panda, antisense antisense A549@0.61671,AG04450@0.404651,BJ@0.546394,GM12878@1.09383,H1HESC@0.378667,HELAS3@0.980296,HEPG2@0.528608,HMEC@0.575123,HSMM@0.251529,HUVEC@0.225114,K562@1.50195,MCF7@0.960561,NHEK@0.545508,NHLF@0.374108,SKNSHRA@1.43077, 0 0 0 0 ENSG00000224616.1 ENST00000421185.1 chr1:100729565-100731676 4 419 1686 intergenic 2.12 0 0,1,0 1 0,0,0 0 0 35.631 0 3.04270462633452 64.442 0 7.28054567022539 74.932 0 0 chimp,human,macaque,marmoset,orangutan, antisense antisense A549@0.374976,AG04450@0.529519,BJ@0.399513,GM12878@0.850323,H1HESC@0.825809,HELAS3@0.522123,HEPG2@0.435879,HMEC@0.07744,HSMM@0.353036,HUVEC@0.4115,K562@1.67257,MCF7@0.147406,NHEK@0.309222,NHLF@0.407404,SKNSHRA@2.05743, 0 0 0 0 ENSG00000228086.1 ENST00000432210.1 chr1:100927955-100951553 2 590 23006 exonic 1.62 1 0,1,0 0 0,0,0 177.2 19.6199252368947 0 142.498305084746 27.0154742241155 4.471 175.401694915254 28.9568373467791 4.624 0 0 cat,chimp,cow,dog,elephant,guinea_pig,horse,human,macaque,marmoset,opossum,orangutan,panda,platypus,rat, antisense antisense A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0.009936,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0.0154025,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000230402.1 ENST00000416343.1 chr1:101092605-101094500 2 372 1521 intergenic -2.97 0 0,0,1 0 0,0,0 17.5483870967742 6.2853385930309 26.112 27.8091397849462 4.43786982248521 86.287 28.2795698924731 9.96318211702827 82.025 0 0 cat,chimp,cow,dog,guinea_pig,horse,human,macaque,marmoset,orangutan,panda,rabbit, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000235795.1 ENST00000414686.1 chr1:101461029-101461816 2 669 116 intronic -0.94 0 0,0,1 0 0,0,0 20.7354260089686 0 17.58 60.5844544095665 0 42.417 56.2869955156951 0 44.634 0 0 cat,chimp,cow,dog,guinea_pig,horse,human,macaque,marmoset,mouse,orangutan,panda,pig,rabbit,rat, antisense antisense A549@0.043041,AG04450@0.051291,BJ@0.03619,GM12878@0.312686,H1HESC@0.0300825,HELAS3@0.178616,HEPG2@0.060666,HMEC@0.073227,HSMM@0.029583,HUVEC@0.068074,K562@0.169101,MCF7@0.045691,NHEK@0.0961513,NHLF@0.086655,SKNSHRA@0.077501, 0 0 0 0 ENSG00000233184.1 ENST00000421013.1 chr1:101491409-101552819 9 2010 59384 intergenic 0.37 1 1,1,1 1 0,0,0 7.68955223880597 8.57668732318469 49.621 6.19203980099502 14.1448706722349 109.519 19.4905472636816 14.9457092819615 120.748 0 0 chimp,human,macaque,marmoset,orangutan, lincRNA processed_transcript A549@3.04333,AG04450@2.79753,BJ@1.6614,GM12878@1.22445,H1HESC@0.529309,HELAS3@1.70092,HEPG2@0.772525,HMEC@1.02328,HSMM@1.06444,HUVEC@1.26042,K562@3.34086,MCF7@1.21284,NHEK@2.34392,NHLF@1.01428,SKNSHRA@4.63092, 0 0 0 0 ENSG00000233184.1 ENST00000453011.1 chr1:101491434-101546118 5 789 53887 intergenic -3.10 0 0,1,0 1 0,0,0 0 7.06825393879785 49.621 0 12.5396477814686 107.734 0 13.8814927533542 117.148 0 0 chimp,cow,dog,elephant,guinea_pig,horse,human,macaque,marmoset,orangutan,pig, lincRNA processed_transcript A549@3.04333,AG04450@2.79753,BJ@1.6614,GM12878@1.22445,H1HESC@0.529309,HELAS3@1.70092,HEPG2@0.772525,HMEC@1.02328,HSMM@1.06444,HUVEC@1.26042,K562@3.34086,MCF7@1.21284,NHEK@2.34392,NHLF@1.01428,SKNSHRA@4.63092, 0 0 0 0 ENSG00000233184.1 ENST00000446527.1 chr1:101491475-101552727 5 1040 60204 intergenic 0.37 1 0,1,1 1 0,0,0 0 8.71659690386021 49.621 0 14.1589429273802 107.734 15.3653846153846 15.0551458374859 115.033 0 0 chimp,guinea_pig,horse,human,macaque,marmoset,orangutan, lincRNA processed_transcript A549@3.04333,AG04450@2.79753,BJ@1.6614,GM12878@1.22445,H1HESC@0.529309,HELAS3@1.70092,HEPG2@0.772525,HMEC@1.02328,HSMM@1.06444,HUVEC@1.26042,K562@3.34086,MCF7@1.21284,NHEK@2.34392,NHLF@1.01428,SKNSHRA@4.63092, 0 0 0 0 ENSG00000233184.1 ENST00000416329.1 chr1:101529167-101549039 6 707 19155 intergenic -3.10 0 0,1,0 0 0,0,0 0 21.3833463847559 0 0 35.3361002349256 20.488 0 33.3892978334639 22.31 0 0 cat,chimp,cow,dog,elephant,horse,human,macaque,marmoset,orangutan, lincRNA processed_transcript A549@3.04333,AG04450@2.79753,BJ@1.6614,GM12878@1.22445,H1HESC@0.529309,HELAS3@1.70092,HEPG2@0.772525,HMEC@1.02328,HSMM@1.06444,HUVEC@1.26042,K562@3.34086,MCF7@1.21284,NHEK@2.34392,NHLF@1.01428,SKNSHRA@4.63092, 0 0 0 0 ENSG00000233184.1 ENST00000454721.1 chr1:101538216-101549130 4 749 10159 intergenic 0.37 0 0,0,1 0 0,0,0 0 13.6080322866424 0 0 21.4250418348263 3.06 0 19.7606063588936 0 0 0 chimp,cow,dog,guinea_pig,horse,human,macaque,marmoset,orangutan,pig, lincRNA processed_transcript A549@3.04333,AG04450@2.79753,BJ@1.6614,GM12878@1.22445,H1HESC@0.529309,HELAS3@1.70092,HEPG2@0.772525,HMEC@1.02328,HSMM@1.06444,HUVEC@1.26042,K562@3.34086,MCF7@1.21284,NHEK@2.34392,NHLF@1.01428,SKNSHRA@4.63092, 0 0 0 0 ENSG00000233184.1 ENST00000449473.1 chr1:101538216-101552821 7 1288 13305 intergenic -2.17 1 0,0,1 0 0,0,0 0 10.8145058248779 0 0 16.3590379556558 3.06 17.929347826087 15.4028560691469 0 0 0 chimp,guinea_pig,horse,human,macaque,marmoset,orangutan, lincRNA processed_transcript A549@3.04333,AG04450@2.79753,BJ@1.6614,GM12878@1.22445,H1HESC@0.529309,HELAS3@1.70092,HEPG2@0.772525,HMEC@1.02328,HSMM@1.06444,HUVEC@1.26042,K562@3.34086,MCF7@1.21284,NHEK@2.34392,NHLF@1.01428,SKNSHRA@4.63092, 0 0 0 0 ENSG00000233184.1 ENST00000451213.1 chr1:101548010-101552817 2 1529 3276 intergenic 0.53 1 0,0,1 0 0,0,0 6.01569653368214 1.72252747252747 128.608 8.87900588620013 0 160.189 21.1092217135383 2.12087912087912 136.479 0 0 cat,chimp,dog,horse,human,macaque,marmoset,orangutan,panda,rabbit,rat, lincRNA processed_transcript A549@3.04333,AG04450@2.79753,BJ@1.6614,GM12878@1.22445,H1HESC@0.529309,HELAS3@1.70092,HEPG2@0.772525,HMEC@1.02328,HSMM@1.06444,HUVEC@1.26042,K562@3.34086,MCF7@1.21284,NHEK@2.34392,NHLF@1.01428,SKNSHRA@4.63092, 0 0 0 0 ENSG00000225938.1 ENST00000432195.1 chr1:101701239-101702084 2 401 442 intergenic 0 0 0,1,0 0 0,0,0 46.2219451371571 0 26.235 47.284289276808 10.8144796380091 51.941 47.1321695760599 11.5565610859729 47.171 0 0 cat,cow,horse,human,macaque,marmoset,orangutan,panda, antisense antisense A549@0,AG04450@0.131159,BJ@0.19424,GM12878@0.0072565,H1HESC@0.056526,HELAS3@0.144882,HEPG2@0,HMEC@0.182886,HSMM@0.664453,HUVEC@2.933,K562@0,MCF7@0,NHEK@0.094517,NHLF@0.028781,SKNSHRA@0.954645, 0 0 0 0 ENSG00000231671.1 ENST00000454466.1 chr1:101788893-101815732 2 258 26579 intergenic 0 0 0,0,0 0 0,0,0 0 3.63106211670868 0 20.3798449612403 18.6316640957147 0 24.6511627906977 19.3436547650401 0 0 0 chimp,dog,elephant,guinea_pig,horse,human,macaque,mouse,orangutan,panda,pig,rabbit, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@8.98001,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0.0026665,NHEK@0.005137,NHLF@0.0025025,SKNSHRA@0, 0 0 0 0 ENSG00000231671.1 ENST00000439146.1 chr1:101789393-101842869 5 469 52999 intergenic 2.69 0 0,0,0 0 0,0,0 0 5.30285477084473 0 60.3113006396589 15.3083643087605 57.858 62.2558635394456 16.1903998188645 53.841 0 0 chimp,dog,elephant,horse,human,macaque,orangutan,panda,pig, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@8.98001,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0.0026665,NHEK@0.005137,NHLF@0.0025025,SKNSHRA@0, 0 0 0 0 ENSG00000231671.1 ENST00000444327.1 chr1:101815605-101855859 2 769 39483 intergenic -0.79 0 0,1,1 0 0,0,0 0 4.67380898108047 0 9.09492847854356 10.8953980194008 0 10.628088426528 11.908922827546 0 0 0 cat,chimp,dog,elephant,horse,human,macaque,marmoset,orangutan,panda, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@8.98001,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0.0026665,NHEK@0.005137,NHLF@0.0025025,SKNSHRA@0, 0 0 0 0 ENSG00000226715.1 ENST00000415532.1 chr1:102189298-102195170 2 476 5394 intergenic -4.38 1 0,0,0 0 0,0,0 0 0 0 0 0.589358546533185 0 0 4.85669262143122 0 0 0 cat,chimp,guinea_pig,human,macaque,marmoset,orangutan,panda, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0.0440875,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000233359.1 ENST00000447916.1 chr1:102665295-102855186 6 651 189230 intergenic -5.31 0 0,0,0 0 0,0,0 0 2.02406066691328 0 0 2.44142049357924 0 0 3.60607726047667 0 0 0 chimp,human,orangutan, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0.0383415,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000230864.1 ENST00000414418.1 chr1:103228878-103319398 7 924 89584 intergenic 2.45 1 0,0,0 0 0,0,0 0 3.92592427219146 0 0 5.51818405072334 0 8.34848484848485 5.91792061082336 0 0 0 chimp,guinea_pig,human,macaque,orangutan, lincRNA lincRNA A549@0,AG04450@0,BJ@0.0064875,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000232753.1 ENST00000424955.1 chr1:103817769-103828355 2 416 10168 intergenic -5.50 1 0,0,0 0 0,0,0 0 23.3923092053501 113.535 0 16.7325924468922 37.668 0 16.4806254917388 73.305 0 0 cat,chimp,cow,elephant,horse,human,macaque,marmoset,orangutan,panda,pig,rabbit, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0.009845,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 177 2 115 2 ENSG00000234037.1 ENST00000455771.1 chr1:103820969-103835986 3 436 14577 intergenic -3.40 0 0,0,0 0 0,0,0 0 7.47924813061672 0 0 1.25156067778006 0 0 1.60945324826782 0 0 0 chimp,human,macaque,marmoset,orangutan, lincRNA lincRNA A549@0,AG04450@0,BJ@0.027504,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0.0158675,MCF7@0,NHEK@0.195091,NHLF@0,SKNSHRA@0.0358265, 161 2 104 2 ENSG00000234037.1 ENST00000451705.1 chr1:103821644-103835986 3 352 13986 intergenic -6.11 0 0,0,0 0 0,0,0 0 7.7952952952953 0 0 1.3044473044473 0 0 1.67746317746318 0 0 0 chimp,human,macaque,orangutan,panda, lincRNA lincRNA A549@0,AG04450@0,BJ@0.027504,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0.0158675,MCF7@0,NHEK@0.195091,NHLF@0,SKNSHRA@0.0358265, 0 0 0 0 ENSG00000230759.1 ENST00000414923.1 chr1:103957501-103968087 2 416 10168 intergenic -5.50 1 0,0,0 0 0,0,0 0 12.235936270653 0 0 25.9533831628639 38.2 0 24.8756884343037 62.944 0 0 cat,chimp,cow,elephant,horse,human,macaque,marmoset,orangutan,panda,pig,rabbit, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 177 2 115 2 ENSG00000224613.1 ENST00000444810.1 chr1:103960701-104068105 4 523 106875 intergenic -3.40 0 0,0,0 0 0,0,0 0 7.77487719298246 47.88 0 10.1443368421053 70.269 0 12.4038643274854 69.806 0 0 chimp,human,macaque,marmoset,orangutan, antisense antisense A549@0,AG04450@0,BJ@0.038579,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0.016249,HSMM@0.0271375,HUVEC@0,K562@0.0132175,MCF7@0,NHEK@0.259131,NHLF@0.0153135,SKNSHRA@0.0372325, 161 2 104 2 ENSG00000224613.1 ENST00000447322.1 chr1:103961376-104068115 5 499 106232 intergenic -6.11 0 0,0,0 0 0,0,0 0 7.82193689283832 47.88 0 10.2057383839145 70.269 0 12.4789423149334 69.806 0 0 chimp,human,macaque,marmoset,orangutan, antisense antisense A549@0,AG04450@0,BJ@0.038579,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0.016249,HSMM@0.0271375,HUVEC@0,K562@0.0132175,MCF7@0,NHEK@0.259131,NHLF@0.0153135,SKNSHRA@0.0372325, 0 0 0 0 ENSG00000215869.3 ENST00000418362.1 chr1:104615645-104619709 2 1223 2839 intergenic 6.41 0 0,1,0 0 0,0,0 0 0 0 21.0915780866721 0 6.674 21.78413736713 1.14934836209933 6.916 0 0 chimp,guinea_pig,human,macaque,marmoset,orangutan, processed_transcript processed_transcript A549@0,AG04450@0,BJ@0,GM12878@0.010676,H1HESC@0,HELAS3@0.0021665,HEPG2@0.001776,HMEC@0,HSMM@0,HUVEC@0.004402,K562@0.0088485,MCF7@0,NHEK@0.001042,NHLF@0,SKNSHRA@0.0053265, 0 0 0 0 ENSG00000230768.1 ENST00000420901.1 chr1:106132316-106161540 4 406 28812 intergenic -5.26 0 0,0,0 0 0,0,0 0 0.351242537831459 0 0 1.18186866583368 0 0 1.81282104678606 0 0 0 chimp,dog,human,macaque,marmoset,orangutan,pig, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0.002383,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000230768.1 ENST00000435253.1 chr1:106144774-106161557 4 1822 14955 intergenic -5.52 0 0,0,0 0 0,0,0 0 0 0 0 2.03724506853895 0 0 2.47067870277499 0 0 0 chimp,guinea_pig,human,macaque,marmoset,orangutan, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0.002383,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000233047.1 ENST00000446693.1 chr1:106470246-106495516 3 551 24715 intergenic 0.33 1 0,0,0 0 0,0,0 0 0.96848067974914 0 0 2.65810236698361 0 0 3.12441836941129 0 0 0 chimp,human,macaque,marmoset,orangutan, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000233047.1 ENST00000429080.1 chr1:106470246-106565834 4 455 95127 intergenic 0.15 1 0,0,0 0 0,0,0 0 1.95841348933531 0 0 4.58723601080661 0 7.74725274725275 5.60786106993808 0 0 0 chimp,human,macaque,marmoset,orangutan, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000233047.1 ENST00000417385.1 chr1:106470247-106496111 4 373 25485 intergenic 4.75 1 0,0,0 0 0,0,0 0 0.939219148518737 0 0 2.57779085736708 0 0 3.03001765744556 0 0 0 chimp,human,macaque,marmoset,orangutan, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000237480.1 ENST00000437803.1 chr1:106615869-106627121 3 354 10894 intergenic -9.38 0 0,0,1 0 0,0,0 0 8.3733247659262 0 0 18.0070681108867 0 0 32.152469249128 0 0 0 chimp,human,macaque,marmoset,orangutan, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000237480.1 ENST00000429608.1 chr1:106623783-106627118 2 329 3004 intergenic 4.48 0 0,0,1 0 0,0,0 0 0 0 55.3677811550152 1.61784287616511 0 240.130699088146 1.66577896138482 63.865 0 0 chimp,human,macaque,marmoset,orangutan, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000237460.1 ENST00000415910.1 chr1:107360861-107380815 3 731 19219 intergenic -0.72 0 0,0,0 0 0,0,0 0 4.02039648264738 18.166 0 0 5.113 2.83447332421341 3.46011759196628 5.263 0 0 chimp,cow,elephant,horse,human,macaque,marmoset,orangutan, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0.453201,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000230489.1 ENST00000438318.1 chr1:108507065-108537229 3 616 29544 intronic -3.92 1 0,0,0 0 0,0,0 52.1866883116883 13.1650758191173 86.555 4.58766233766234 19.3215204440834 34.28 4.51298701298701 20.0859057676686 45.847 0 0 chimp,cow,dog,elephant,guinea_pig,horse,human,macaque,marmoset,orangutan,panda,pig,rabbit, antisense antisense A549@0,AG04450@0,BJ@0,GM12878@0.020687,H1HESC@0.0188065,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0.154143,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000226822.1 ENST00000419428.1 chr1:108614104-108617141 3 429 2604 intergenic -0.92 0 0,0,0 0 0,0,0 0 0 0 0 5.01152073732719 24.066 0 7.23463901689708 25.635 0 0 cat,chimp,cow,dog,horse,human,macaque,marmoset,orangutan,rabbit, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000226822.1 ENST00000451023.1 chr1:108614993-108617115 2 426 1694 intergenic -0.92 0 0,0,0 0 0,0,0 0 0 0 0 0 13.05 0 2.66706021251476 14.321 0 0 cat,chimp,dog,horse,human,macaque,marmoset,orangutan,panda, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000238122.1 ENST00000438965.1 chr1:108803818-108816311 2 2479 10012 intergenic 18.62 0 0,0,1 0 0,0,0 0 0 0 4.32271077047196 2.96324410707151 0 9.88785800726099 5.77906512185378 0 0 0 chimp,human,macaque, lincRNA processed_transcript A549@0.275345,AG04450@0.0025995,BJ@0.0707905,GM12878@0,H1HESC@0.010354,HELAS3@2.07282,HEPG2@1.17471,HMEC@0,HSMM@0.105702,HUVEC@0.0630755,K562@8.37752,MCF7@1.93991,NHEK@0.004763,NHLF@0.0109405,SKNSHRA@0.0265985, 65 2 0 0 ENSG00000188740.6 ENST00000411846.1 chr1:108815565-108880475 6 1564 63336 intergenic 29.82 0 0,1,0 0 0,0,0 97.670716112532 0.827112542629784 0 224.081202046036 2.13011557408109 0 324.471227621483 3.67400846280157 0 0 0 cat,chimp,cow,dog,elephant,guinea_pig,horse,human,macaque,marmoset,mouse,opossum,orangutan,panda,pig,rabbit,rat, processed_transcript processed_transcript A549@0.0225835,AG04450@0,BJ@0.0118705,GM12878@0,H1HESC@0,HELAS3@1.21016,HEPG2@0.12688,HMEC@0,HSMM@0,HUVEC@0.0086285,K562@1.04562,MCF7@0.668672,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000224698.1 ENST00000419814.1 chr1:108963311-108975806 2 2479 10014 intronic 18.62 1 0,0,0 0 0,0,0 0 0 0 10.914885034288 1.90333533053725 0 10.0157321500605 5.24295985620132 0 0 0 chimp,human,macaque, lincRNA processed_transcript A549@0.085096,AG04450@0.0012995,BJ@0.0171935,GM12878@0,H1HESC@0.0027335,HELAS3@2.81854,HEPG2@1.61575,HMEC@0,HSMM@0.050085,HUVEC@0.0126795,K562@9.72738,MCF7@2.65065,NHEK@0.00238167,NHLF@0.002366,SKNSHRA@0.009197, 65 2 0 0 ENSG00000232971.1 ENST00000437400.1 chr1:109276878-109278894 3 441 1571 intronic -1.85 0 0,0,0 0 0,0,0 13.2698412698413 8.54232972628899 0 61.8480725623583 0 0 54.9251700680272 0 4.921 0 0 chimp,dog,elephant,guinea_pig,horse,human,macaque,marmoset,orangutan,panda,pig,rabbit,rat, antisense antisense A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000203897.3 ENST00000369989.2 chr1:109399839-109401146 3 532 771 intronic 6.61 0 0,0,1 0 0,0,0 81.4210526315789 0 0 40.7424812030075 5.34760051880675 25.519 41.4624060150376 8.45136186770428 27.851 0 0 chimp,cow,dog,elephant,guinea_pig,human,macaque,marmoset,orangutan,panda,rabbit, antisense antisense A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0.00299367,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000203897.3 ENST00000417241.1 chr1:109399866-109400962 2 439 655 intronic 6.61 0 0,0,1 0 0,0,0 0 0 0 21.125284738041 6.29465648854962 25.519 26.5899772209567 5.2030534351145 27.851 0 0 chimp,cow,dog,elephant,guinea_pig,horse,human,macaque,marmoset,orangutan,pig,rabbit, antisense antisense A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0.00299367,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000250110.1 ENST00000513461.1 chr1:109965123-109968162 2 2095 942 intronic -3.84 0 0,0,0 0 0,0,0 0 32.0700636942675 34.5 8.16610978520286 0 53.555 12.890214797136 0 62.141 1 1 chimp,human,macaque,marmoset,orangutan, lincRNA lincRNA A549@0.005921,AG04450@0.0030755,BJ@0.006173,GM12878@0.0055785,H1HESC@0,HELAS3@0.0072915,HEPG2@0.005203,HMEC@0,HSMM@0.050862,HUVEC@0,K562@0.0225335,MCF7@0.0057525,NHEK@0.00864933,NHLF@0,SKNSHRA@0.0091435, 0 0 0 0 ENSG00000254942.1 ENST00000526411.1 chr1:110082528-110086459 2 580 3349 exonic 8.59 0 0,1,0 0 0,0,0 642.798275862069 131.177366378023 693.79 507.463793103448 91.8551806509406 411.305 469.215517241379 84.1681098835473 339.487 0 0 cat,chimp,cow,dog,elephant,guinea_pig,horse,human,macaque,marmoset,mouse,opossum,orangutan,panda,pig,rabbit,rat, antisense antisense A549@0,AG04450@0.0151275,BJ@0.0061475,GM12878@0.008055,H1HESC@0.022756,HELAS3@0.036481,HEPG2@0.101561,HMEC@0.048013,HSMM@0,HUVEC@0,K562@0.0528755,MCF7@0.0315395,NHEK@0,NHLF@0,SKNSHRA@0.158757, 0 0 0 0 ENSG00000225113.1 ENST00000436416.1 chr1:110138847-110140403 2 594 960 intergenic 0 0 0,1,0 0 0,0,0 0 0 0 11.1868686868687 0 1.984 20.3922558922559 0 2.65 0 0 chimp,elephant,human,macaque,marmoset,orangutan, antisense antisense A549@0.264896,AG04450@0.445998,BJ@0.470541,GM12878@0.519895,H1HESC@0.335849,HELAS3@0.583998,HEPG2@0.540056,HMEC@1.21939,HSMM@0.45139,HUVEC@0.813636,K562@0.99326,MCF7@0.262133,NHEK@0.816883,NHLF@0.414547,SKNSHRA@0.705216, 0 0 0 0 ENSG00000228703.1 ENST00000369843.3 chr1:110171039-110172927 3 685 1199 exonic 3.85 0 0,1,1 0 0,0,0 257.903649635037 125.593828190158 143.706 309.267153284671 145.28023352794 250.195 323.188321167883 149.977481234362 244.186 0 0 cat,chimp,cow,dog,elephant,guinea_pig,horse,human,macaque,marmoset,opossum,orangutan,panda,rabbit, antisense antisense A549@0,AG04450@0.0430295,BJ@0,GM12878@0,H1HESC@0,HELAS3@0.007715,HEPG2@0.006325,HMEC@0.005951,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0.022613,SKNSHRA@0.0033035, 0 0 0 0 ENSG00000241720.1 ENST00000431955.1 chr1:110268442-110317874 4 804 48622 exonic 4.33 0 0,0,0 0 0,0,0 16.7636815920398 9.0406400394883 0 52.6778606965174 15.4408086874254 0 55.657960199005 16.4893463864094 0 0 0 chimp,dog,horse,human,macaque,marmoset, processed_transcript processed_transcript A549@0,AG04450@0.0710675,BJ@0,GM12878@0,H1HESC@0,HELAS3@0.038848,HEPG2@0.0081605,HMEC@0,HSMM@0,HUVEC@0.0216755,K562@0.0139305,MCF7@0.464977,NHEK@0,NHLF@0.013294,SKNSHRA@0, 0 0 0 0 ENSG00000228420.1 ENST00000453347.1 chr1:110370977-110414058 4 472 42603 intergenic -1.59 0 0,0,0 0 0,0,0 0 1.02880078867685 0 0 1.6969696969697 3.315 0 2.15024763514307 3.367 0 0 chimp,horse,human,macaque,marmoset,orangutan,pig, lincRNA lincRNA A549@0.0161655,AG04450@0,BJ@0.005084,GM12878@0,H1HESC@0.004358,HELAS3@0.0409505,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0.0369495,MCF7@0.259847,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000235005.1 ENST00000415166.1 chr1:110426798-110428886 2 448 1638 intergenic 5.92 0 0,0,1 0 0,0,0 0 8.32722832722833 0 3.69642857142857 10.6965811965812 18.666 3.72321428571429 10.8418803418803 19.746 0 0 cat,chimp,elephant,guinea_pig,horse,human,macaque,marmoset,orangutan,panda,pig, antisense antisense A549@0,AG04450@0,BJ@0,GM12878@0.0089595,H1HESC@0.0312155,HELAS3@0,HEPG2@0.0047345,HMEC@0,HSMM@0,HUVEC@0,K562@0.010916,MCF7@0.022845,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000227091.1 ENST00000430098.1 chr1:110708808-110709805 2 480 515 exonic -1.05 0 0,0,0 0 0,0,0 321.69375 0 19.494 288.75 0 19.352 261.664583333333 0 23.272 0 0 cat,chimp,cow,dog,elephant,guinea_pig,horse,human,macaque,marmoset,mouse,opossum,orangutan,panda,pig,rabbit, antisense antisense A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0.00286,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0.0776535, 0 0 0 0 ENSG00000227091.1 ENST00000443008.1 chr1:110709429-110715111 2 795 4885 exonic 24.81 0 0,0,0 0 0,0,0 291.261635220126 15.9756397134084 0 279.850314465409 20.0427840327533 0 255.646540880503 23.7410440122825 0 0 0 cat,chimp,cow,dog,guinea_pig,horse,human,macaque,marmoset,mouse,opossum,orangutan,panda,pig,rabbit,rat, antisense antisense A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0.00286,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0.0776535, 0 0 0 0 ENSG00000227091.1 ENST00000418579.1 chr1:110709703-110710842 2 182 955 exonic 0 0 0,0,1 0 0,0,0 315.692307692308 15.0408376963351 0 297.483516483516 13.8848167539267 0 307.230769230769 17.1811518324607 4.518 0 0 cat,chimp,cow,dog,elephant,guinea_pig,horse,human,macaque,marmoset,mouse,opossum,orangutan,panda,pig,platypus,rabbit,rat, antisense antisense A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0.00286,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0.0776535, 0 0 0 0 ENSG00000235526.1 ENST00000440688.1 chr1:110720265-110721341 2 506 568 intronic 0.39 0 0,0,0 0 0,0,0 0 0 0 0 0 0 0 2.5669014084507 0 0 0 chimp,guinea_pig,human,macaque,marmoset,orangutan,rabbit, antisense antisense A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000224965.1 ENST00000455967.1 chr1:110751456-110752609 2 746 405 intergenic 1.66 0 0,0,0 0 0,0,0 0 114.192592592593 166.699 4.93565683646113 61.0888888888889 286.403 7.38471849865952 71.5950617283951 259.321 0 0 cat,chimp,dog,elephant,horse,human,macaque,marmoset,mouse,orangutan,panda, antisense antisense A549@0.0418235,AG04450@0,BJ@0.0543875,GM12878@0.01433,H1HESC@0.0841335,HELAS3@0.171207,HEPG2@0.102108,HMEC@0.038319,HSMM@0.033675,HUVEC@0.029964,K562@0.0134965,MCF7@0,NHEK@0.00706,NHLF@0.0078255,SKNSHRA@0.037477, 0 0 0 0 ENSG00000227963.1 ENST00000449169.1 chr1:110828997-110881793 4 2607 50183 exonic 2.43 0 0,1,0 0 0,0,0 0 8.10485622621206 791.955 15.8446490218642 18.851583205468 599.602 20.1948599923283 25.5073231970986 506.301 0 0 chimp,human,macaque,orangutan, lincRNA processed_transcript A549@0.139697,AG04450@0.025214,BJ@0.0706065,GM12878@0.174181,H1HESC@0.264529,HELAS3@0.433615,HEPG2@0.307061,HMEC@0.062729,HSMM@0.177507,HUVEC@0.184046,K562@0.319592,MCF7@0.18479,NHEK@0.0587347,NHLF@0.032092,SKNSHRA@0.0858995, 0 0 0 0 ENSG00000224699.1 ENST00000457535.1 chr1:110950147-110958896 3 814 7931 exonic -0.13 0 0,0,1 0 0,0,0 17.997542997543 10.1171352918926 0 36.4127764127764 15.3263144622368 0 40.8796068796069 16.4745933677973 0 0 0 chimp,human,macaque,marmoset,orangutan, antisense antisense A549@0.180363,AG04450@0.0255795,BJ@0.0506115,GM12878@0.166813,H1HESC@0.066296,HELAS3@0.3918,HEPG2@0.130872,HMEC@0.035082,HSMM@0.0759405,HUVEC@0.022054,K562@0.397839,MCF7@0.184229,NHEK@0.120845,NHLF@0.021388,SKNSHRA@0.134105, 0 0 0 0 ENSG00000224699.1 ENST00000444238.1 chr1:110955615-110961033 4 523 4889 intergenic 0.66 0 0,0,0 0 0,0,0 0 16.4121497238699 0 0 21.5217835958274 6.909 0 22.001840867253 7.266 0 0 chimp,horse,human,macaque,marmoset,orangutan,panda,pig, antisense antisense A549@0.180363,AG04450@0.0255795,BJ@0.0506115,GM12878@0.166813,H1HESC@0.066296,HELAS3@0.3918,HEPG2@0.130872,HMEC@0.035082,HSMM@0.0759405,HUVEC@0.022054,K562@0.397839,MCF7@0.184229,NHEK@0.120845,NHLF@0.021388,SKNSHRA@0.134105, 0 0 0 0 ENSG00000235407.1 ENST00000457402.1 chr1:111030302-111032880 2 2349 227 intergenic 5.13 0 0,0,0 0 0,0,0 0 0 0 26.2924648786718 0 38.088 31.8578118348233 0 44.681 0 0 cow,elephant,horse,human,macaque,marmoset,orangutan, lincRNA lincRNA A549@0.0009235,AG04450@0,BJ@0,GM12878@0,H1HESC@0.0101855,HELAS3@0.0022575,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000232811.1 ENST00000440689.1 chr1:111486089-111495470 2 2357 7022 exonic 2.11 0 0,1,0 0 0,0,0 181.14212982605 93.6301623469097 0 201.240135765804 117.700939903161 0 196.883750530335 99.2373967530618 0 0 0 chimp,human,macaque,marmoset,orangutan, antisense antisense A549@0.001171,AG04450@0,BJ@0.0010435,GM12878@0.123357,H1HESC@0,HELAS3@0.0019155,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0.113938,MCF7@0.001743,NHEK@0.00447733,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000229283.1 ENST00000426321.1 chr1:111860222-111866603 2 474 5905 exonic -6.97 0 0,0,0 0 0,0,0 102.379746835443 21.4966977138019 0 90.9409282700422 35.9312447078747 17.033 139.696202531646 46.7324301439458 18.032 0 0 chimp,cow,dog,horse,human,macaque,marmoset,mouse,orangutan,panda,pig,rabbit,rat, antisense antisense A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0.011452,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000231346.1 ENST00000450155.1 chr1:112142277-112150940 5 889 7766 intronic 5.43 0 0,1,1 0 0,0,0 0 20.3089106361061 0 0 28.458408447077 31.513 0 29.8766417718259 49.007 0 0 chimp,human,macaque,marmoset,orangutan, lincRNA lincRNA A549@0,AG04450@0.013456,BJ@0.029794,GM12878@0.450025,H1HESC@0.009695,HELAS3@0.0486275,HEPG2@0.0334945,HMEC@0.01832,HSMM@0.013662,HUVEC@0.0161005,K562@0.090929,MCF7@0.0348605,NHEK@0.0147843,NHLF@0.0255525,SKNSHRA@0.020934, 3 10 0 0 ENSG00000231346.1 ENST00000441004.1 chr1:112142487-112150946 5 763 7688 intronic 5.43 0 0,0,0 0 0,0,0 0 20.5149583766909 0 0 28.7471383975026 31.513 0 30.1797606659729 49.007 0 0 chimp,human,macaque,marmoset,orangutan, lincRNA lincRNA A549@0,AG04450@0.013456,BJ@0.029794,GM12878@0.450025,H1HESC@0.009695,HELAS3@0.0486275,HEPG2@0.0334945,HMEC@0.01832,HSMM@0.013662,HUVEC@0.0161005,K562@0.090929,MCF7@0.0348605,NHEK@0.0147843,NHLF@0.0255525,SKNSHRA@0.020934, 0 0 0 0 ENSG00000231346.1 ENST00000453988.1 chr1:112147002-112151345 3 703 3636 intronic 0.26 0 0,0,0 0 0,0,0 0 29.75 0 0 38.0327282728273 31.513 0 38.0792079207921 49.007 0 0 chimp,human,orangutan, lincRNA lincRNA A549@0,AG04450@0.013456,BJ@0.029794,GM12878@0.450025,H1HESC@0.009695,HELAS3@0.0486275,HEPG2@0.0334945,HMEC@0.01832,HSMM@0.013662,HUVEC@0.0161005,K562@0.090929,MCF7@0.0348605,NHEK@0.0147843,NHLF@0.0255525,SKNSHRA@0.020934, 0 0 0 0 ENSG00000227811.2 ENST00000430373.1 chr1:112282463-112290420 3 2128 5825 intronic -2.76 1 0,0,0 0 0,0,0 26.3735902255639 20.4384549356223 0 41.0582706766917 25.7476394849785 34.255 38.437969924812 27.1654935622318 41.541 0 0 chimp,elephant,guinea_pig,horse,human,macaque,marmoset,orangutan, lincRNA processed_transcript A549@0.381622,AG04450@0.172761,BJ@0.247778,GM12878@0.0194695,H1HESC@1.24059,HELAS3@0.104927,HEPG2@0.0816085,HMEC@0.072378,HSMM@0.12141,HUVEC@0.1115,K562@0.0263695,MCF7@0.127043,NHEK@0.0705903,NHLF@2.33611,SKNSHRA@0.691976, 0 0 0 0 ENSG00000227811.2 ENST00000524935.1 chr1:112282475-112289235 2 777 5981 intronic -0.19 0 0,0,0 0 0,0,0 54.037323037323 19.9053669954857 0 94.0759330759331 25.0760742350777 34.255 85.8777348777349 26.4569469988296 41.541 0 0 chimp,elephant,human,macaque,marmoset,orangutan,panda, lincRNA processed_transcript A549@0.381622,AG04450@0.172761,BJ@0.247778,GM12878@0.0194695,H1HESC@1.24059,HELAS3@0.104927,HEPG2@0.0816085,HMEC@0.072378,HSMM@0.12141,HUVEC@0.1115,K562@0.0263695,MCF7@0.127043,NHEK@0.0705903,NHLF@2.33611,SKNSHRA@0.691976, 0 0 0 0 ENSG00000232558.1 ENST00000439736.1 chr1:112396384-112399527 2 374 2767 intronic -6.82 0 0,0,0 0 0,0,0 50.5347593582888 0 11.1 19.6390374331551 3.39971087820744 14.19 22.216577540107 6.23780267437658 19.147 0 0 cat,chimp,human,macaque,marmoset,orangutan, sense_intronic sense_intronic A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000237556.1 ENST00000441125.1 chr1:112451958-112452783 3 467 354 intronic 4.30 0 0,0,1 0 0,0,0 0 0 123.835 5.11777301927195 0 127.774 3.76231263383298 0 135.567 0 0 chimp,dog,elephant,horse,human,macaque,marmoset,orangutan,pig, antisense antisense A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000237556.1 ENST00000427471.1 chr1:112452270-112453553 3 580 699 intronic 0.66 0 0,1,0 0 0,0,0 28.9655172413793 53.7510729613734 118.561 58.6086206896552 80.2532188841202 130.164 46.6396551724138 75.065808297568 137.324 0 0 chimp,dog,elephant,horse,human,macaque,marmoset,orangutan,pig, antisense antisense A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000237556.1 ENST00000419258.1 chr1:112452307-112453552 4 379 860 intronic 0.66 0 0,1,0 0 0,0,0 44.3271767810026 43.6883720930233 118.561 88.3693931398417 65.2290697674419 130.164 70.5488126649076 61.0127906976744 137.324 0 0 chimp,dog,elephant,horse,human,macaque,marmoset,orangutan,pig, antisense antisense A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000240200.1 ENST00000442751.1 chr1:112532392-112533745 2 973 378 intergenic 3.78 0 0,1,0 0 0,0,0 187.412127440904 299.428571428571 260.47 88.3155190133607 412.542328042328 234.597 73.0513874614594 321.708994708995 185.466 0 0 cat,chimp,cow,elephant,horse,human,macaque,marmoset,mouse,orangutan,panda,pig,rabbit,rat, lincRNA processed_transcript A549@0,AG04450@0,BJ@0.021928,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0.0422165,HUVEC@0,K562@0,MCF7@0.033518,NHEK@0.00430833,NHLF@0.119584,SKNSHRA@0, 0 0 0 0 ENSG00000240200.1 ENST00000428461.1 chr1:112532918-112533795 2 707 168 intergenic 3.78 0 0,1,0 0 0,0,0 75.5983026874116 18.7142857142857 359.638 100.140028288543 175.720238095238 293.853 91.7227722772277 112.779761904762 237.754 0 0 cat,chimp,cow,guinea_pig,horse,human,macaque,marmoset,mouse,orangutan,panda,pig,rabbit, lincRNA processed_transcript A549@0,AG04450@0,BJ@0.021928,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0.0422165,HUVEC@0,K562@0,MCF7@0.033518,NHEK@0.00430833,NHLF@0.119584,SKNSHRA@0, 0 0 0 0 ENSG00000231437.2 ENST00000438293.1 chr1:112533158-112541464 2 3066 5238 intergenic 3.78 0 0,0,1 0 0,0,0 1.17416829745597 74.7695685376098 308.318 11.4484670580561 57.2836960672012 275.026 11.5619699934768 57.0700649102711 225.726 0 0 chimp,cow,horse,human,macaque,marmoset,orangutan,panda, lincRNA processed_transcript A549@0,AG04450@0,BJ@0.0350305,GM12878@0,H1HESC@0.000676,HELAS3@0,HEPG2@0.004775,HMEC@0.001335,HSMM@0.0048395,HUVEC@0,K562@0,MCF7@0.060334,NHEK@0.011268,NHLF@0.024161,SKNSHRA@0.0008765, 0 0 0 0 ENSG00000231246.1 ENST00000427290.1 chr1:112719856-112903150 2 545 182747 intergenic 10.63 0 0,0,1 0 0,0,0 0 16.7367289203106 34.563 14.1596330275229 24.0767126136134 10.419 16.2330275229358 26.2263511849716 10.576 0 0 chimp,cow,dog,elephant,horse,human,macaque,marmoset,orangutan,panda,pig,rabbit, lincRNA lincRNA A549@0,AG04450@0.016598,BJ@0.010417,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0.007486,HSMM@0.0400505,HUVEC@0,K562@0,MCF7@0,NHEK@0.021476,NHLF@0.003567,SKNSHRA@0, 0 0 0 0 ENSG00000225075.1 ENST00000421943.1 chr1:113236310-113239243 3 446 2483 exonic 8.74 0 0,1,1 0 0,0,0 146.937219730942 119.801852597664 106.26 141.699551569507 140.536850583971 90.282 106.309417040359 127.557390253725 94.607 0 0 cat,chimp,cow,dog,elephant,guinea_pig,human,macaque,marmoset,mouse,orangutan,panda,pig,rabbit,rat, antisense antisense A549@0.0399995,AG04450@0,BJ@0,GM12878@0.0089795,H1HESC@0.0066185,HELAS3@0.0601235,HEPG2@0.0290665,HMEC@0,HSMM@0.010154,HUVEC@0.056287,K562@0,MCF7@0.091099,NHEK@0.004339,NHLF@0,SKNSHRA@0.145989, 0 0 0 0 ENSG00000215866.2 ENST00000433505.1 chr1:113362792-113392437 4 763 28876 intergenic 8.31 0 0,1,0 1 0,0,0 0 0 0 0 0.358429145310985 0 0 1.13242831417094 0 0 0 human, lincRNA processed_transcript A549@0.017326,AG04450@0.0033455,BJ@0.0098345,GM12878@0,H1HESC@3.95866,HELAS3@0.005836,HEPG2@0.0059985,HMEC@0,HSMM@0,HUVEC@0.188581,K562@0.080115,MCF7@0.003786,NHEK@0.0548337,NHLF@0,SKNSHRA@0.0424075, 0 0 0 0 ENSG00000215866.2 ENST00000401018.1 chr1:113362796-113393265 7 1812 28645 intergenic 8.03 0 0,0,0 0 0,0,0 0 0 0 0 0.361319602024786 0 0 1.14156048175947 0 0 0 human, lincRNA processed_transcript A549@0.017326,AG04450@0.0033455,BJ@0.0098345,GM12878@0,H1HESC@3.95866,HELAS3@0.005836,HEPG2@0.0059985,HMEC@0,HSMM@0,HUVEC@0.188581,K562@0.080115,MCF7@0.003786,NHEK@0.0548337,NHLF@0,SKNSHRA@0.0424075, 0 0 0 0 ENSG00000215866.2 ENST00000449572.1 chr1:113362912-113392401 5 699 28782 intergenic 8.31 0 0,1,0 1 0,0,0 0 0 0 0 0.359599749843652 0 0 1.13612674588284 0 0 0 human, lincRNA processed_transcript A549@0.017326,AG04450@0.0033455,BJ@0.0098345,GM12878@0,H1HESC@3.95866,HELAS3@0.005836,HEPG2@0.0059985,HMEC@0,HSMM@0,HUVEC@0.188581,K562@0.080115,MCF7@0.003786,NHEK@0.0548337,NHLF@0,SKNSHRA@0.0424075, 0 0 0 0 ENSG00000224167.1 ENST00000456651.1 chr1:113392650-113420493 3 584 27255 intergenic 0.73 0 0,1,1 0 0,0,0 0 0 0 0 0.336672170243992 0 0 1.31300678774537 0 0 0 human,macaque,marmoset,orangutan, lincRNA lincRNA A549@0.0314075,AG04450@0.11979,BJ@0.141672,GM12878@0,H1HESC@0.557916,HELAS3@0.0108325,HEPG2@0,HMEC@0.008356,HSMM@0.0832225,HUVEC@1.34989,K562@0,MCF7@0,NHEK@0.183606,NHLF@0.013296,SKNSHRA@0.266593, 0 0 0 0 ENSG00000224167.1 ENST00000422022.1 chr1:113392698-113420489 2 488 27301 intergenic 0.73 0 0,1,1 0 0,0,0 0 0 0 0 0.33610490458225 0 0 1.31079447639281 0 0 0 chimp,human,macaque,orangutan, lincRNA lincRNA A549@0.0314075,AG04450@0.11979,BJ@0.141672,GM12878@0,H1HESC@0.557916,HELAS3@0.0108325,HEPG2@0,HMEC@0.008356,HSMM@0.0832225,HUVEC@1.34989,K562@0,MCF7@0,NHEK@0.183606,NHLF@0.013296,SKNSHRA@0.266593, 0 0 0 0 ENSG00000226419.1 ENST00000416193.1 chr1:113499037-113506694 3 739 6914 exonic 4.82 1 1,1,1 1 0,0,0 0 0 0.956 0 1.21897599074342 64.525 0 1.2708996239514 59.951 0 0 cat,chimp,elephant,human,macaque,marmoset,orangutan,panda, lincRNA processed_transcript A549@1.05829,AG04450@0.966325,BJ@1.05657,GM12878@2.67127,H1HESC@2.8614,HELAS3@4.34687,HEPG2@2.49842,HMEC@1.10942,HSMM@0.449164,HUVEC@1.148,K562@2.47728,MCF7@0.129823,NHEK@1.12793,NHLF@0.778084,SKNSHRA@0.988005, 0 0 0 0 ENSG00000226419.1 ENST00000435800.1 chr1:113499051-113544813 4 1743 44013 exonic 4.82 1 0,1,0 1 0,0,0 41.2220309810671 6.96110240156317 0 22.2558806655192 11.9864585463386 64.525 26.6746987951807 13.7693408765592 59.951 0 0 chimp,dog,human,marmoset,orangutan, lincRNA processed_transcript A549@1.05829,AG04450@0.966325,BJ@1.05657,GM12878@2.67127,H1HESC@2.8614,HELAS3@4.34687,HEPG2@2.49842,HMEC@1.10942,HSMM@0.449164,HUVEC@1.148,K562@2.47728,MCF7@0.129823,NHEK@1.12793,NHLF@0.778084,SKNSHRA@0.988005, 0 0 0 0 ENSG00000226419.1 ENST00000428411.1 chr1:113499083-113511609 3 2311 10211 exonic 4.82 0 1,1,1 1 0,0,0 0 0 0 0 1.45823131916561 64.525 1.2202509736045 1.71432768582901 59.951 0 0 chimp,human,macaque,orangutan, lincRNA processed_transcript A549@1.05829,AG04450@0.966325,BJ@1.05657,GM12878@2.67127,H1HESC@2.8614,HELAS3@4.34687,HEPG2@2.49842,HMEC@1.10942,HSMM@0.449164,HUVEC@1.148,K562@2.47728,MCF7@0.129823,NHEK@1.12793,NHLF@0.778084,SKNSHRA@0.988005, 0 0 0 0 ENSG00000226419.1 ENST00000420168.1 chr1:113499142-113511020 3 897 10977 exonic 4.82 0 0,1,1 1 0,0,0 0 0 0 0 1.35647262457866 64.525 0 1.59469800491938 59.951 0 0 dog,guinea_pig,human,macaque,marmoset,orangutan,panda,rabbit, lincRNA processed_transcript A549@1.05829,AG04450@0.966325,BJ@1.05657,GM12878@2.67127,H1HESC@2.8614,HELAS3@4.34687,HEPG2@2.49842,HMEC@1.10942,HSMM@0.449164,HUVEC@1.148,K562@2.47728,MCF7@0.129823,NHEK@1.12793,NHLF@0.778084,SKNSHRA@0.988005, 0 0 0 0 ENSG00000236066.1 ENST00000413231.1 chr1:113550876-113589677 2 375 38424 intergenic 0 1 0,0,1 0 0,0,0 0 14.8386945658963 0 0 15.1146679158859 0 0 21.0446075369561 0 0 0 chimp,cow,dog,elephant,horse,human,macaque,marmoset,orangutan,panda,pig,rabbit, lincRNA lincRNA A549@0,AG04450@0.005945,BJ@0.0055505,GM12878@0.104211,H1HESC@0,HELAS3@0.030997,HEPG2@0.0399835,HMEC@0,HSMM@0,HUVEC@0.0064495,K562@0.0184765,MCF7@0,NHEK@0.0237023,NHLF@0.005118,SKNSHRA@0.0120365, 0 0 0 0 ENSG00000238198.1 ENST00000421157.1 chr1:113554309-113615727 3 2456 58958 intergenic -3.34 0 0,1,1 1 0,0,0 77.8228827361564 9.16567726177957 15.12 85.1168566775244 8.19829370060043 94.695 77.203990228013 14.5012042470911 94.53 0 0 chimp,guinea_pig,human,macaque,marmoset,mouse,orangutan,pig,rabbit,rat, lincRNA processed_transcript A549@0.0252765,AG04450@0.0392275,BJ@0.0247455,GM12878@0.021263,H1HESC@0.071286,HELAS3@0.017308,HEPG2@0.004612,HMEC@0.016652,HSMM@0.0605105,HUVEC@0.048721,K562@0.0907135,MCF7@0.000836,NHEK@0.015646,NHLF@0.075699,SKNSHRA@0.16095, 0 0 0 0 ENSG00000236066.1 ENST00000451149.1 chr1:113576295-113589677 2 434 12946 intergenic 5.10 1 0,1,1 0 0,0,0 0 19.0322879653947 0 0 19.5478139966013 0 0 17.9988413409547 0 0 0 cat,chimp,cow,dog,elephant,guinea_pig,horse,human,macaque,orangutan,panda,pig,rabbit, lincRNA lincRNA A549@0,AG04450@0.005945,BJ@0.0055505,GM12878@0.104211,H1HESC@0,HELAS3@0.030997,HEPG2@0.0399835,HMEC@0,HSMM@0,HUVEC@0.0064495,K562@0.0184765,MCF7@0,NHEK@0.0237023,NHLF@0.005118,SKNSHRA@0.0120365, 0 0 0 0 ENSG00000231128.1 ENST00000429398.1 chr1:114355001-114366118 4 769 10342 exonic 3.27 0 0,1,0 0 0,0,0 22.6814044213264 12.2210404177142 426.413 61.2808842652796 12.4167472442468 532.639 63.6267880364109 15.333881260878 404.385 0 0 chimp,dog,elephant,guinea_pig,horse,human,macaque,marmoset,mouse,orangutan,panda,rabbit, antisense antisense A549@0,AG04450@0,BJ@0,GM12878@0.008039,H1HESC@0,HELAS3@0.0242215,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0.038773,NHEK@0,NHLF@0,SKNSHRA@0.0065895, 0 0 0 0 ENSG00000231128.1 ENST00000418238.1 chr1:114355230-114358098 3 419 2445 exonic 0 0 0,0,0 0 0,0,0 0 0 412.773 77.8973747016706 15.3836400817996 543.259 98.3078758949881 21.002044989775 409.186 0 0 cat,chimp,dog,elephant,guinea_pig,horse,human,macaque,marmoset,mouse,orangutan,panda,pig,rabbit,rat, antisense antisense A549@0,AG04450@0,BJ@0,GM12878@0.008039,H1HESC@0,HELAS3@0.0242215,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0.038773,NHEK@0,NHLF@0,SKNSHRA@0.0065895, 0 0 0 0 ENSG00000231128.1 ENST00000448199.1 chr1:114366035-114371793 2 172 5584 intronic 0.84 0 0,0,0 0 0,0,0 0 15.3495702005731 17.442 0 18.7476719197708 0 0 23.2082736389685 9.72 0 0 cat,chimp,human,macaque,marmoset,orangutan, antisense antisense A549@0,AG04450@0,BJ@0,GM12878@0.008039,H1HESC@0,HELAS3@0.0242215,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0.038773,NHEK@0,NHLF@0,SKNSHRA@0.0065895, 0 0 0 0 ENSG00000226167.1 ENST00000419536.1 chr1:114399257-114443859 5 1729 42865 exonic 6.15 0 0,1,1 0 0,0,0 184.66049739734 16.3697888720401 14.88 209.356853672643 25.3124693806136 67.827 187.609022556391 38.3112795987402 72.56 0 0 chimp,dog,guinea_pig,human,macaque,marmoset,orangutan,panda, lincRNA processed_transcript A549@0,AG04450@0,BJ@0.00142,GM12878@0.0108415,H1HESC@0,HELAS3@0.003061,HEPG2@0,HMEC@0.004723,HSMM@0,HUVEC@0,K562@0.006176,MCF7@4.95955,NHEK@0.00147233,NHLF@0.0022505,SKNSHRA@0, 0 0 0 0 ENSG00000235527.2 ENST00000441071.1 chr1:114466622-114471940 3 568 4746 exonic -0.81 0 1,1,1 0 0,0,0 19.5950704225352 0 22.63 42.6848591549296 2.9614412136536 158.938 46.6461267605634 6.82511588706279 193.272 0 0 chimp,cow,dog,elephant,horse,human,macaque,orangutan,panda,rabbit, lincRNA processed_transcript A549@0.0976995,AG04450@0.066112,BJ@0.0292385,GM12878@0.364414,H1HESC@0.0251505,HELAS3@0.273608,HEPG2@0.131657,HMEC@0.015498,HSMM@0.025124,HUVEC@0.0327805,K562@0.576816,MCF7@0.750318,NHEK@0.042612,NHLF@0.040972,SKNSHRA@0.0866225, 0 0 0 0 ENSG00000235527.2 ENST00000427953.1 chr1:114466623-114471854 2 1319 3910 exonic -0.81 1 1,1,1 0 0,0,0 0 0 32.83 16.2789992418499 0.916879795396419 172.977 25.8385140257771 2.92097186700767 207.466 0 0 cat,chimp,dog,guinea_pig,horse,human,macaque,marmoset,orangutan,panda,pig, lincRNA processed_transcript A549@0.0976995,AG04450@0.066112,BJ@0.0292385,GM12878@0.364414,H1HESC@0.0251505,HELAS3@0.273608,HEPG2@0.131657,HMEC@0.015498,HSMM@0.025124,HUVEC@0.0327805,K562@0.576816,MCF7@0.750318,NHEK@0.042612,NHLF@0.040972,SKNSHRA@0.0866225, 0 0 0 0 ENSG00000235527.2 ENST00000450706.1 chr1:114466623-114471880 5 2112 3137 exonic 2.99 1 1,1,1 0 0,0,0 0 0 34.025 5.02982954545455 4.48039528211667 172.977 6.02035984848485 10.3257889703538 207.466 0 0 chimp,human,macaque,marmoset,orangutan, lincRNA processed_transcript A549@0.0976995,AG04450@0.066112,BJ@0.0292385,GM12878@0.364414,H1HESC@0.0251505,HELAS3@0.273608,HEPG2@0.131657,HMEC@0.015498,HSMM@0.025124,HUVEC@0.0327805,K562@0.576816,MCF7@0.750318,NHEK@0.042612,NHLF@0.040972,SKNSHRA@0.0866225, 0 0 0 0 ENSG00000235527.2 ENST00000426237.2 chr1:114470257-114472114 2 1036 819 exonic 0.51 0 0,1,0 1 0,0,0 15.0916988416988 0 18.39 32.8436293436293 12.7838827838828 153.75 35.96138996139 25.6056166056166 187.143 0 0 cat,chimp,cow,dog,guinea_pig,human,macaque,marmoset,mouse,orangutan,panda,pig,rabbit,rat, lincRNA processed_transcript A549@0.0976995,AG04450@0.066112,BJ@0.0292385,GM12878@0.364414,H1HESC@0.0251505,HELAS3@0.273608,HEPG2@0.131657,HMEC@0.015498,HSMM@0.025124,HUVEC@0.0327805,K562@0.576816,MCF7@0.750318,NHEK@0.042612,NHLF@0.040972,SKNSHRA@0.0866225, 0 0 0 0 ENSG00000232895.1 ENST00000420156.1 chr1:114749049-114804900 2 330 55519 intergenic 0 0 0,1,1 0 0,0,0 0 14.3472865145266 0 0 17.492047767431 0 0 21.966029647508 0 0 0 human,macaque,orangutan, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0.252504,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000233730.1 ENST00000448680.1 chr1:115642293-115645279 2 489 2495 intergenic -2.93 0 0,0,1 0 0,0,0 0 0 50.76 0 0.795190380761523 89.431 0 0.804809619238477 92.847 0 0 NA lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0.0136535,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0.0092855,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000228035.1 ENST00000425449.1 chr1:115825655-115910693 2 2608 82428 encompassing 4.00 0 0,1,0 0 0,0,0 56.5475460122699 39.5380453244043 49.2 56.8665644171779 36.8003591012763 10.619 56.9413343558282 38.9203183384287 11.148 0 0 cat,chimp,cow,elephant,guinea_pig,horse,human,macaque,marmoset,orangutan,panda,pig,rabbit, antisense antisense A549@0.004042,AG04450@0.002953,BJ@0.025906,GM12878@0,H1HESC@0,HELAS3@0.0017315,HEPG2@0.0041805,HMEC@0,HSMM@0.0031535,HUVEC@0,K562@0,MCF7@0.003151,NHEK@0,NHLF@0.132578,SKNSHRA@0.0017385, 0 0 0 0 ENSG00000228127.1 ENST00000438885.1 chr1:116461997-116468529 3 1393 5135 intergenic 3.20 0 0,0,0 0 0,0,0 284.610193826274 47.9655306718598 0 176.534099066762 49.2307692307692 4.063 175.257717157215 50.9446932814021 4.267 0 0 chimp,cow,dog,elephant,guinea_pig,horse,human,macaque,mouse,orangutan,panda,pig, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0.0215475,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000237993.1 ENST00000453128.1 chr1:116556434-116560326 3 702 3186 intronic -3.79 0 0,0,1 0 0,0,0 12.4501424501425 0 0 0 8.45762711864407 0 0 9.22693032015066 0 0 0 chimp,elephant,horse,human,macaque,marmoset,orangutan, antisense antisense A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000235933.1 ENST00000426515.1 chr1:116706905-116708862 2 912 1043 intergenic 1.80 0 0,1,0 0 0,0,0 0 30.9971236816874 0 0 23.2368168744008 0 0 19.6347075743049 0 0 0 chimp,elephant,horse,human,macaque,marmoset,orangutan,panda, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0.034864,H1HESC@0.0390175,HELAS3@0.0776365,HEPG2@0.187493,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0.0190945,SKNSHRA@0.0049645, 0 0 0 0 ENSG00000229895.1 ENST00000432281.1 chr1:116916755-116917283 2 475 51 exonic 4.03 0 0,0,1 0 0,0,0 14.0421052631579 126.274509803922 8.365 59.781052631579 500 16.04 46.0778947368421 290.176470588235 18.633 0 0 chimp,cow,human,macaque,marmoset,orangutan,panda,rat, antisense antisense A549@0,AG04450@0,BJ@0,GM12878@0.022268,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0.045049,NHEK@0,NHLF@0,SKNSHRA@0.0103955, 0 0 0 0 ENSG00000233154.1 ENST00000423907.1 chr1:116966346-117021430 4 450 54628 intergenic -4.76 0 0,0,1 0 0,0,0 175 8.80757120890386 0 91.1555555555556 8.83396792853481 0 119.964444444444 9.65874643040199 0 0 0 cat,chimp,cow,dog,elephant,guinea_pig,horse,human,macaque,marmoset,mouse,orangutan,rabbit,rat, lincRNA lincRNA A549@0.021822,AG04450@0,BJ@0.013821,GM12878@2.58835,H1HESC@0,HELAS3@0.029896,HEPG2@0.085928,HMEC@0.027756,HSMM@0,HUVEC@0,K562@0.0378505,MCF7@1.86353,NHEK@0.0209417,NHLF@0,SKNSHRA@0.116651, 0 0 0 0 ENSG00000230381.1 ENST00000449303.1 chr1:116971673-116975990 2 511 3804 intergenic 2.00 0 0,1,1 0 0,0,0 1.03131115459883 0 246.636 33.5988258317025 0.783385909568875 173.672 27.4579256360078 1.0515247108307 176.668 0 0 chimp,human,macaque,marmoset,orangutan,rabbit, processed_transcript processed_transcript A549@0.083798,AG04450@0.0109725,BJ@0.166766,GM12878@0.677509,H1HESC@0.0233805,HELAS3@0.121578,HEPG2@0.114329,HMEC@0.01081,HSMM@0,HUVEC@0.06039,K562@0.353017,MCF7@0.0200955,NHEK@0.0716827,NHLF@0,SKNSHRA@0.138514, 0 0 0 0 ENSG00000230381.1 ENST00000439755.1 chr1:116971673-117105789 2 511 133603 intronic -5.58 0 0,0,1 0 0,0,0 0 4.94598923676864 62.451 0 6.3651864104848 65.61 0 10.3212502713262 71.685 0 0 cow,dog,human,orangutan, processed_transcript processed_transcript A549@0.083798,AG04450@0.0109725,BJ@0.166766,GM12878@0.677509,H1HESC@0.0233805,HELAS3@0.121578,HEPG2@0.114329,HMEC@0.01081,HSMM@0,HUVEC@0.06039,K562@0.353017,MCF7@0.0200955,NHEK@0.0716827,NHLF@0,SKNSHRA@0.138514, 0 0 0 0 ENSG00000233154.1 ENST00000443219.1 chr1:116995268-117021464 4 617 25573 intergenic 0.28 0 0,0,1 0 0,0,0 0 3.45680991670903 0 19.2755267423015 8.57810972510069 0 27.6320907617504 9.74848472998866 0 0 0 chimp,human,macaque,marmoset,orangutan, lincRNA lincRNA A549@0.021822,AG04450@0,BJ@0.013821,GM12878@2.58835,H1HESC@0,HELAS3@0.029896,HEPG2@0.085928,HMEC@0.027756,HSMM@0,HUVEC@0,K562@0.0378505,MCF7@1.86353,NHEK@0.0209417,NHLF@0,SKNSHRA@0.116651, 1 96 0 0 ENSG00000233154.1 ENST00000437308.1 chr1:116995656-117009064 3 536 12868 intergenic -0.73 0 1,1,1 0 0,0,0 0 0 0 10 3.4808828100715 0 11.8152985074627 4.75738265464719 1.944 0 0 cat,chimp,cow,horse,human,macaque,marmoset,orangutan,panda,pig, lincRNA lincRNA A549@0.021822,AG04450@0,BJ@0.013821,GM12878@2.58835,H1HESC@0,HELAS3@0.029896,HEPG2@0.085928,HMEC@0.027756,HSMM@0,HUVEC@0,K562@0.0378505,MCF7@1.86353,NHEK@0.0209417,NHLF@0,SKNSHRA@0.116651, 0 0 0 0 ENSG00000233154.1 ENST00000430316.1 chr1:116995657-117020849 3 458 24730 intergenic -0.73 0 0,1,1 0 0,0,0 0 3.57464617873029 0 25.9672489082969 8.87052163364335 0 37.2248908296943 10.0807925596442 0 0 0 chimp,cow,dog,elephant,guinea_pig,horse,human,macaque,marmoset,orangutan,panda,rabbit, lincRNA lincRNA A549@0.021822,AG04450@0,BJ@0.013821,GM12878@2.58835,H1HESC@0,HELAS3@0.029896,HEPG2@0.085928,HMEC@0.027756,HSMM@0,HUVEC@0,K562@0.0378505,MCF7@1.86353,NHEK@0.0209417,NHLF@0,SKNSHRA@0.116651, 0 0 0 0 ENSG00000233154.1 ENST00000434879.1 chr1:116995657-117021448 4 432 25353 intergenic -0.73 0 0,0,1 0 0,0,0 0 3.486806295113 0 0 9.12164240918235 0 0 10.5055417504832 0 0 0 chimp,dog,elephant,horse,human,macaque,marmoset,orangutan,pig, lincRNA lincRNA A549@0.021822,AG04450@0,BJ@0.013821,GM12878@2.58835,H1HESC@0,HELAS3@0.029896,HEPG2@0.085928,HMEC@0.027756,HSMM@0,HUVEC@0,K562@0.0378505,MCF7@1.86353,NHEK@0.0209417,NHLF@0,SKNSHRA@0.116651, 0 0 0 0 ENSG00000233154.1 ENST00000430107.1 chr1:117006343-117009074 2 478 2251 intergenic -3.06 0 0,1,1 0 0,0,0 0 0 0 11.2133891213389 3.93069746779209 0 13.2489539748954 5.00488671701466 1.944 0 0 cat,chimp,cow,dog,guinea_pig,horse,human,macaque,marmoset,panda,pig, lincRNA lincRNA A549@0.021822,AG04450@0,BJ@0.013821,GM12878@2.58835,H1HESC@0,HELAS3@0.029896,HEPG2@0.085928,HMEC@0.027756,HSMM@0,HUVEC@0,K562@0.0378505,MCF7@1.86353,NHEK@0.0209417,NHLF@0,SKNSHRA@0.116651, 0 0 0 0 ENSG00000224950.1 ENST00000456414.1 chr1:117035645-117041834 2 2293 3894 intergenic 3.36 1 0,0,1 0 0,0,0 1.4129960750109 8.22804314329738 0 3.52420409943306 4.28608115048793 5.871 1.76973397296119 8.25937339496661 6.517 0 0 chimp,human,macaque,orangutan, lincRNA processed_transcript A549@0.121477,AG04450@0.026695,BJ@0.163524,GM12878@1.49527,H1HESC@0.0338435,HELAS3@0.232268,HEPG2@0.299262,HMEC@0.056651,HSMM@0.0945775,HUVEC@0.104028,K562@0.263997,MCF7@0.293446,NHEK@0.125742,NHLF@0.063112,SKNSHRA@0.297354, 0 0 0 0 ENSG00000236137.1 ENST00000445523.1 chr1:117568104-117602112 4 1810 32192 exonic 2.45 0 1,1,1 1 0,0,0 11.3314917127072 9.70421222664016 10.602 38.492817679558 9.8364189860835 28.243 43.6508287292818 12.4927621769384 33.884 0 0 cat,chimp,cow,dog,guinea_pig,horse,human,macaque,marmoset,orangutan,panda, antisense antisense A549@0.0593415,AG04450@0.0117875,BJ@0.0463145,GM12878@2.31032,H1HESC@0.097296,HELAS3@0.211726,HEPG2@0.077943,HMEC@0.162817,HSMM@0.0616745,HUVEC@0.146071,K562@0.0990835,MCF7@2.15313,NHEK@0.0960823,NHLF@0.019278,SKNSHRA@0.0414945, 0 0 0 0 ENSG00000236137.1 ENST00000421254.1 chr1:117568919-117575143 2 620 5602 intronic -0.81 1 0,0,1 0 0,0,0 0 6.17243841485184 22.568 6.93548387096774 12.8031060335594 22.765 11.0048387096774 15.3291681542306 23.94 0 0 cat,chimp,cow,elephant,horse,human,macaque,marmoset,orangutan,panda, antisense antisense A549@0.0593415,AG04450@0.0117875,BJ@0.0463145,GM12878@2.31032,H1HESC@0.097296,HELAS3@0.211726,HEPG2@0.077943,HMEC@0.162817,HSMM@0.0616745,HUVEC@0.146071,K562@0.0990835,MCF7@2.15313,NHEK@0.0960823,NHLF@0.019278,SKNSHRA@0.0414945, 0 0 0 0 ENSG00000235202.1 ENST00000442182.1 chr1:117838142-117863958 3 508 25304 intergenic -6.25 1 0,0,0 0 0,0,0 45.4685039370079 20.623537780588 0 7.52755905511811 20.1807619348719 0 7.65354330708661 21.3820344609548 1.215 0 0 chimp,dog,human,macaque,marmoset,pig, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000236866.1 ENST00000440801.1 chr1:118139454-118148333 3 374 8501 intergenic -0.42 1 0,0,0 0 0,0,0 0 11.4461828020233 0 0 22.7682625573462 75.684 0 23.8654275967533 86.328 0 0 chimp,horse,human,marmoset,orangutan,panda, antisense antisense A549@0,AG04450@0.0073125,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0.0223295,MCF7@0.0026945,NHEK@0,NHLF@0,SKNSHRA@0.014578, 0 0 0 0 ENSG00000236866.1 ENST00000425010.1 chr1:118146621-118148392 3 760 1007 intergenic -4.44 0 0,1,1 0 0,0,0 20.8842105263158 0 0 0 2.38331678252234 75.684 0 2.38331678252234 86.328 0 0 cat,chimp,elephant,horse,human,macaque,marmoset,orangutan,panda,pig,rabbit, antisense antisense A549@0,AG04450@0.0073125,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0.0223295,MCF7@0.0026945,NHEK@0,NHLF@0,SKNSHRA@0.014578, 0 0 0 0 ENSG00000236866.1 ENST00000456126.1 chr1:118147246-118148307 2 440 619 intergenic -6.07 0 0,1,0 0 0,0,0 0 0 0 0 3.87722132471729 75.684 0 3.87722132471729 86.328 0 0 chimp,elephant,guinea_pig,horse,human,macaque,marmoset,orangutan,pig, antisense antisense A549@0,AG04450@0.0073125,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0.0223295,MCF7@0.0026945,NHEK@0,NHLF@0,SKNSHRA@0.014578, 0 0 0 0 ENSG00000251057.1 ENST00000504345.1 chr1:118320271-118321523 2 1009 241 intergenic -1.06 0 0,0,1 0 0,0,0 0 0 0 117.000991080278 210.473029045643 70.35 235.889990089197 540.780082987552 68.451 0 0 cat,chimp,cow,dog,elephant,guinea_pig,horse,human,macaque,marmoset,mouse,opossum,orangutan,panda,rabbit, lincRNA lincRNA A549@0.0128125,AG04450@0.027616,BJ@0,GM12878@0.022514,H1HESC@0,HELAS3@0.007095,HEPG2@0.0127335,HMEC@0,HSMM@0.002035,HUVEC@0,K562@0.0314885,MCF7@0.11614,NHEK@0.0141507,NHLF@0.007634,SKNSHRA@0.0277355, 0 0 0 0 ENSG00000246170.1 ENST00000500821.1 chr1:118406111-118411617 2 5425 79 intergenic 0.76 0 0,1,0 0 0,0,0 0 0 0 2.34930875576037 0 0 3.64350230414747 0 0 0 1 chimp,human,marmoset,orangutan, lincRNA lincRNA A549@0.006248,AG04450@0.017002,BJ@0.00604,GM12878@0.003461,H1HESC@0.0126625,HELAS3@0.0060495,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0.0142375,MCF7@0.002223,NHEK@0.0112937,NHLF@0.001497,SKNSHRA@0.0185915, 0 0 0 0 ENSG00000226172.2 ENST00000439394.1 chr1:119542967-119544015 2 651 395 intergenic 4.28 0 0,1,1 0 0,0,0 8.12596006144393 20.9620253164557 0 62.1582181259601 20.6582278481013 40.083 48.5913978494624 20.8810126582278 39.805 0 0 cat,chimp,cow,dog,guinea_pig,horse,human,macaque,marmoset,orangutan,panda,rabbit, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0.0081285,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 153 2 97 2 ENSG00000239216.1 ENST00000449439.1 chr1:119543241-119544028 2 408 377 intergenic 4.28 0 0,1,0 0 0,0,0 24.8039215686275 9.15119363395226 0 117.485294117647 8.93899204244032 38.323 95.5147058823529 9.27851458885942 38.045 0 0 cat,chimp,cow,dog,elephant,horse,human,macaque,marmoset,orangutan,panda,rabbit, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 153 2 97 2 ENSG00000224238.1 ENST00000423984.1 chr1:119590028-119607408 2 2058 15320 intronic 3.42 0 1,1,1 0 0,0,0 15.3950437317784 1.57565274151436 0 9.66812439261419 5.30287206266319 23.46 8.88629737609329 5.91305483028721 26.128 0 0 human,marmoset, sense_intronic sense_intronic A549@0.079227,AG04450@0.0596755,BJ@0.121983,GM12878@0.206852,H1HESC@0.134134,HELAS3@0.343583,HEPG2@0.398837,HMEC@0,HSMM@0.0430075,HUVEC@0.194509,K562@0.156513,MCF7@0.112263,NHEK@0.130619,NHLF@0.03899,SKNSHRA@0.0874655, 0 0 0 0 ENSG00000231365.1 ENST00000425884.1 chr1:119683019-119693557 4 741 9791 exonic 4.18 0 0,1,0 1 0,0,0 21.417004048583 34.493310182821 0 40.9757085020243 41.1946685731795 2.935 42.9946018893387 38.021141864978 2.957 0 0 chimp,dog,human,macaque,orangutan,panda, antisense antisense A549@2.67272,AG04450@1.73292,BJ@2.02104,GM12878@3.06546,H1HESC@1.41571,HELAS3@7.90078,HEPG2@2.92301,HMEC@2.85963,HSMM@1.1464,HUVEC@2.30199,K562@7.55639,MCF7@3.00399,NHEK@2.66414,NHLF@1.263,SKNSHRA@2.1901, 0 0 0 0 ENSG00000231365.1 ENST00000440150.1 chr1:119683048-119726446 4 2465 40927 exonic 4.18 1 0,1,1 1 0,0,0 6.43813387423935 8.25186307327681 0 12.3176470588235 11.0057663645027 2.935 12.9245436105477 10.3632565299191 2.957 0 0 chimp,human,macaque,orangutan, antisense antisense A549@2.67272,AG04450@1.73292,BJ@2.02104,GM12878@3.06546,H1HESC@1.41571,HELAS3@7.90078,HEPG2@2.92301,HMEC@2.85963,HSMM@1.1464,HUVEC@2.30199,K562@7.55639,MCF7@3.00399,NHEK@2.66414,NHLF@1.263,SKNSHRA@2.1901, 0 0 0 0 ENSG00000231365.1 ENST00000457043.1 chr1:119683331-119684823 2 538 952 intergenic -3.86 0 0,1,0 1 0,0,0 0 0 15.87 0 0 33.298 0 0 34.816 0 0 cat,chimp,cow,dog,elephant,horse,human,macaque,marmoset,orangutan,panda,pig,rabbit, antisense antisense A549@2.67272,AG04450@1.73292,BJ@2.02104,GM12878@3.06546,H1HESC@1.41571,HELAS3@7.90078,HEPG2@2.92301,HMEC@2.85963,HSMM@1.1464,HUVEC@2.30199,K562@7.55639,MCF7@3.00399,NHEK@2.66414,NHLF@1.263,SKNSHRA@2.1901, 0 0 0 0 ENSG00000231365.1 ENST00000413531.1 chr1:119683353-119776804 5 1149 92294 intergenic -1.03 1 0,1,0 1 0,0,0 0 12.0626909658266 15.87 0 18.7750124601816 33.298 2.32637075718016 25.5491472901814 34.816 0 0 chimp,cow,dog,elephant,guinea_pig,horse,human,macaque,marmoset,orangutan,pig,rabbit, antisense antisense A549@2.67272,AG04450@1.73292,BJ@2.02104,GM12878@3.06546,H1HESC@1.41571,HELAS3@7.90078,HEPG2@2.92301,HMEC@2.85963,HSMM@1.1464,HUVEC@2.30199,K562@7.55639,MCF7@3.00399,NHEK@2.66414,NHLF@1.263,SKNSHRA@2.1901, 0 0 0 0 ENSG00000231365.1 ENST00000418015.1 chr1:119683353-119818596 7 1522 133709 intergenic 1.02 0 0,1,0 1 0,0,0 1.01182654402103 11.5865274588846 15.87 1.30157687253614 18.2491006588936 33.298 3.94086727989488 22.8277827221803 34.816 0 0 chimp,dog,horse,human,macaque,marmoset,orangutan,panda, antisense antisense A549@2.67272,AG04450@1.73292,BJ@2.02104,GM12878@3.06546,H1HESC@1.41571,HELAS3@7.90078,HEPG2@2.92301,HMEC@2.85963,HSMM@1.1464,HUVEC@2.30199,K562@7.55639,MCF7@3.00399,NHEK@2.66414,NHLF@1.263,SKNSHRA@2.1901, 0 0 0 0 ENSG00000231365.1 ENST00000445565.1 chr1:119689032-119689656 2 507 115 intergenic 1.80 0 0,1,0 0 0,0,0 0 0 0 0 0 0 0 0 0 0 0 cat,chimp,cow,dog,elephant,horse,human,macaque,marmoset,orangutan,panda,pig, antisense antisense A549@2.67272,AG04450@1.73292,BJ@2.02104,GM12878@3.06546,H1HESC@1.41571,HELAS3@7.90078,HEPG2@2.92301,HMEC@2.85963,HSMM@1.1464,HUVEC@2.30199,K562@7.55639,MCF7@3.00399,NHEK@2.66414,NHLF@1.263,SKNSHRA@2.1901, 0 0 0 0 ENSG00000227712.1 ENST00000457719.1 chr1:119802888-119869926 3 895 66139 intergenic -11.94 0 0,1,0 0 0,0,0 59.408938547486 14.193788838658 114.444 60.7888268156425 16.8531426238679 141.565 47.4189944134078 17.8519330500915 151.253 0 0 chimp,dog,elephant,human,macaque,marmoset,orangutan,panda,rabbit, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0.03726,H1HESC@0.254628,HELAS3@0.069723,HEPG2@0.139605,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000232650.1 ENST00000420059.1 chr1:119870799-119873438 3 439 2196 intergenic 0 0 0,0,1 0 0,0,0 0 0 114.444 0 0 146.659 0 0 158.309 0 0 cat,chimp,dog,horse,human,macaque,marmoset,orangutan,pig,rabbit,rat, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0.004561,H1HESC@0.0788795,HELAS3@0.0472185,HEPG2@0.101033,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000232650.1 ENST00000457683.1 chr1:119870875-119898805 4 387 27537 intergenic -2.11 0 0,0,0 0 0,0,0 0 10.4909394632676 114.444 0 18.0003268329883 143.716 0 18.1352725423975 155.213 0 0 chimp,horse,human,macaque,marmoset,orangutan,pig, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0.004561,H1HESC@0.0788795,HELAS3@0.0472185,HEPG2@0.101033,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000230921.1 ENST00000419144.1 chr1:119911569-119912954 2 309 1074 intronic -3.33 0 0,1,0 0 0,0,0 0 0 0 0 0 4.611 0 0 4.708 0 0 chimp,human,macaque,orangutan, sense_intronic sense_intronic A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000242959.1 ENST00000450675.1 chr1:120143780-120145118 2 535 801 intergenic -4.02 0 0,0,0 0 0,0,0 0 0 0 23.5345794392523 1.54806491885144 0 71.1102803738318 2.43445692883895 0 0 0 chimp,dog,elephant,guinea_pig,human,macaque,marmoset,mouse,opossum,orangutan,rat, processed_transcript processed_transcript A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000236933.1 ENST00000412759.1 chr1:120835810-120838343 2 752 1779 intergenic 0 0 0,1,0 1 0,0,0 51.2952127659575 26.5722315907813 47.466 607.997340425532 182.091624508151 103.895 543.329787234043 136.269252388983 90.533 0 0 cat,chimp,cow,dog,elephant,guinea_pig,horse,human,macaque,marmoset,mouse,opossum,orangutan,panda,pig,rat, antisense antisense A549@6.67991,AG04450@7.04611,BJ@11.2398,GM12878@1.81857,H1HESC@7.16978,HELAS3@19.4915,HEPG2@14.208,HMEC@5.56823,HSMM@5.67565,HUVEC@18.7935,K562@3.54075,MCF7@4.2362,NHEK@3.53037,NHLF@4.09286,SKNSHRA@9.25098, 0 0 0 0 ENSG00000227193.1 ENST00000446249.1 chr1:120876263-120905153 3 661 28225 intergenic 6.39 0 0,0,0 0 0,0,0 52.393343419062 4.90798937112489 45.696 90.4220877458396 12.2829406554473 58.113 114.641452344932 22.2627812223206 91.359 0 0 dog,guinea_pig,horse,human,macaque,mouse,pig,rabbit, lincRNA lincRNA A549@0,AG04450@0.0101265,BJ@0.007752,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0.026796,HUVEC@0.003662,K562@0.011301,MCF7@0.092506,NHEK@0,NHLF@0.0068445,SKNSHRA@0, 131 2 80 2 ENSG00000227193.1 ENST00000427872.1 chr1:120876495-120905159 4 490 28168 intergenic 7.00 0 0,0,0 0 0,0,0 70.6775510204082 4.91792104515763 48.144 125.1 12.3077960806589 312.017 158.481632653061 22.307831581937 406.657 0 0 cat,chimp,cow,dog,horse,human,macaque,marmoset,mouse,pig,rabbit,rat, lincRNA lincRNA A549@0,AG04450@0.0101265,BJ@0.007752,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0.026796,HUVEC@0.003662,K562@0.011301,MCF7@0.092506,NHEK@0,NHLF@0.0068445,SKNSHRA@0, 0 0 101 2 ENSG00000223345.2 ENST00000430394.1 chr1:120906028-120915073 2 750 8293 intergenic 43.59 0 0,0,1 1 0,0,0 205.088 0.147594356686362 25.272 266.877333333333 5.17219341613409 56.329 349.372 11.6529603279875 73.818 0 0 chimp,cow,dog,elephant,horse,human,macaque,orangutan,panda,pig,rabbit, processed_transcript processed_transcript A549@0.501273,AG04450@0.44255,BJ@0.617993,GM12878@0.36558,H1HESC@0.536299,HELAS3@0.277827,HEPG2@0,HMEC@0.563934,HSMM@0.814833,HUVEC@0.288735,K562@0.573671,MCF7@0.842986,NHEK@0.249012,NHLF@0.457842,SKNSHRA@0.591272, 0 0 0 0 ENSG00000234998.1 ENST00000426275.1 chr1:120906609-120935761 2 457 28693 exonic 0 0 0,0,1 0 0,0,0 0 0 155.448 22.8971553610503 5.00843411284982 218.383 23.1137855579869 7.97975115881922 282.759 0 0 cat,chimp,cow,dog,elephant,guinea_pig,horse,human,macaque,marmoset,orangutan,panda,pig,rabbit,rat, antisense antisense A549@0.003601,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0.0127055,MCF7@0.0142475,NHEK@0.001748,NHLF@0,SKNSHRA@0.008886, 0 0 0 0 ENSG00000233029.2 ENST00000537401.1 chr1:120924841-120926874 1 2033 0 intergenic 5.86 0 0,0,0 0 0,0,0 0 0 0 0 0 0 0 0 8.032 0 1 chimp,human,macaque,orangutan, lincRNA processed_transcript A549@0.069497,AG04450@0.046788,BJ@0.0465145,GM12878@0.0091495,H1HESC@0.050504,HELAS3@0.0619195,HEPG2@0.0346025,HMEC@0.00072,HSMM@0.0217745,HUVEC@0,K562@0.0909755,MCF7@0.599818,NHEK@0.047776,NHLF@0.003559,SKNSHRA@0.154136, 0 0 0 0 ENSG00000233029.2 ENST00000457996.1 chr1:120925634-120933000 2 3541 3823 intronic 5.86 1 0,1,0 0 0,0,0 0 0 0 1.68088110703191 20.3031650536228 0 2.37305845806269 23.2110907664138 0 0 0 chimp,human,orangutan, lincRNA processed_transcript A549@0.069497,AG04450@0.046788,BJ@0.0465145,GM12878@0.0091495,H1HESC@0.050504,HELAS3@0.0619195,HEPG2@0.0346025,HMEC@0.00072,HSMM@0.0217745,HUVEC@0,K562@0.0909755,MCF7@0.599818,NHEK@0.047776,NHLF@0.003559,SKNSHRA@0.154136, 30 3 0 0 ENSG00000230806.1 ENST00000437515.1 chr1:121102017-121139765 4 2500 35242 intergenic -0.02 0 0,0,0 0 0,0,0 0 11.4609556778843 0 96.3144 55.9640202031667 0 119.4416 84.6989671414789 0 0 0 cat,chimp,cow,dog,elephant,horse,human,macaque,marmoset,orangutan,panda, lincRNA processed_transcript A549@0.001347,AG04450@0.0099855,BJ@0.0027215,GM12878@0.000805,H1HESC@0.006065,HELAS3@0.002707,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0.0285625,MCF7@0.000821,NHEK@0,NHLF@0,SKNSHRA@0.005516, 33 3 0 0 ENSG00000227082.1 ENST00000417218.1 chr1:121138614-121204983 2 3660 62707 intergenic 1.06 0 0,1,0 0 0,0,0 0 0.275088905544836 0 0 4.03629578834899 0 64.0885245901639 7.09096273143349 325.671 0 0 chimp,human,macaque,marmoset,orangutan, lincRNA processed_transcript A549@0.001347,AG04450@0.0075,BJ@0.0032985,GM12878@0.0078755,H1HESC@0.0021895,HELAS3@0.034253,HEPG2@0.00389,HMEC@0,HSMM@0.026793,HUVEC@0.0063135,K562@0.0045355,MCF7@0.0250855,NHEK@0.00442667,NHLF@0.0063465,SKNSHRA@0.0479765, 0 0 0 0 ENSG00000230806.1 ENST00000429055.1 chr1:121139338-121140666 3 405 919 intergenic 0.27 0 0,0,0 0 0,0,0 0 0 0 0 0 0 82.1802469135802 0 0 0 0 chimp,human,macaque,orangutan, lincRNA processed_transcript A549@0.001347,AG04450@0.0099855,BJ@0.0027215,GM12878@0.000805,H1HESC@0.006065,HELAS3@0.002707,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0.0285625,MCF7@0.000821,NHEK@0,NHLF@0,SKNSHRA@0.005516, 181 2 0 0 ENSG00000231429.1 ENST00000445260.1 chr1:121166923-121171134 3 493 3714 intergenic -3.75 0 0,0,0 0 0,0,0 0 4.64458804523425 0 0 2.51965535810447 0 0 4.85218093699515 0 0 0 NA lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0.0468175,HUVEC@0,K562@0,MCF7@0.030647,NHEK@0,NHLF@0.058694,SKNSHRA@0.025846, 1 96 0 0 ENSG00000228826.1 ENST00000437523.1 chr1:121236177-121252295 4 365 15747 intergenic 0 0 0,0,0 0 0,0,0 0 0 0 0 6.71194513240617 0 0 77.1191338032641 0 0 0 chimp,cow,horse,human,orangutan,panda,pig, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0.253448,H1HESC@0,HELAS3@0.023559,HEPG2@0.117157,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0.00345933,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000224857.1 ENST00000450546.1 chr1:121315744-121322322 2 424 6152 intergenic -1.73 0 0,1,0 0 0,0,0 0 0 0 0 0 0 0 0 5.439 0 0 chimp,cow,dog,elephant,guinea_pig,horse,human,macaque,marmoset,mouse,orangutan,panda,rabbit, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000227552.1 ENST00000445662.1 chr1:142553293-142559170 3 962 4911 intergenic 1.59 0 0,0,0 0 0,0,0 12.9106029106029 0 0 25.9490644490644 3.92710242313174 0 25.7837837837838 6.14131541437589 0 0 0 cat,chimp,cow,dog,elephant,guinea_pig,horse,human,macaque,mouse,orangutan,panda,pig, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0.0645475,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 40 3 22 3 ENSG00000233798.1 ENST00000415979.1 chr1:142569266-142588234 4 359 18603 intergenic -0.28 0 0,0,0 0 0,0,0 0 0 0 17.5821727019499 9.59146374240714 0 19.3203342618384 11.7713809600602 0 0 0 chimp,human,macaque,orangutan, lincRNA lincRNA A549@0,AG04450@0.0244665,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0.02165,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 185 2 0 0 ENSG00000230880.1 ENST00000400755.2 chr1:142618766-142621059 2 148 2143 intergenic 0 0 0,1,0 1 0,0,0 0 0 0 0 0 0 0 0 0 0 0 chimp,human,orangutan,panda, lincRNA processed_transcript A549@0.0336935,AG04450@0.0323465,BJ@0.019345,GM12878@0.152234,H1HESC@0,HELAS3@0.162836,HEPG2@0.024679,HMEC@0,HSMM@0.005576,HUVEC@0.015356,K562@5.03134,MCF7@0.60148,NHEK@0.038676,NHLF@0,SKNSHRA@3.83933, 0 0 0 0 ENSG00000230880.1 ENST00000446205.1 chr1:142618769-142621059 3 337 1949 intergenic 0 0 0,1,0 1 0,0,0 0 0 0 0 0 0 0 0 0 0 0 chimp,human,marmoset,orangutan, lincRNA processed_transcript A549@0.0336935,AG04450@0.0323465,BJ@0.019345,GM12878@0.152234,H1HESC@0,HELAS3@0.162836,HEPG2@0.024679,HMEC@0,HSMM@0.005576,HUVEC@0.015356,K562@5.03134,MCF7@0.60148,NHEK@0.038676,NHLF@0,SKNSHRA@3.83933, 144 2 90 2 ENSG00000230880.1 ENST00000412092.1 chr1:142618795-142621532 2 592 2143 intergenic -0.60 0 0,1,0 1 0,0,0 0 0 0 0 0 0 0 0 0 0 0 cat,chimp,dog,horse,human,macaque,marmoset,orangutan,pig,rabbit, lincRNA processed_transcript A549@0.0336935,AG04450@0.0323465,BJ@0.019345,GM12878@0.152234,H1HESC@0,HELAS3@0.162836,HEPG2@0.024679,HMEC@0,HSMM@0.005576,HUVEC@0.015356,K562@5.03134,MCF7@0.60148,NHEK@0.038676,NHLF@0,SKNSHRA@3.83933, 121 2 0 0 ENSG00000230880.1 ENST00000413650.1 chr1:142618808-142621059 3 193 2054 intergenic 0 0 0,1,0 1 0,0,0 0 0 0 0 0 0 0 0 0 0 0 chimp,human,orangutan, lincRNA processed_transcript A549@0.0336935,AG04450@0.0323465,BJ@0.019345,GM12878@0.152234,H1HESC@0,HELAS3@0.162836,HEPG2@0.024679,HMEC@0,HSMM@0.005576,HUVEC@0.015356,K562@5.03134,MCF7@0.60148,NHEK@0.038676,NHLF@0,SKNSHRA@3.83933, 0 0 0 0 ENSG00000230880.1 ENST00000426408.1 chr1:142619123-142665640 3 735 45778 intergenic -1.19 0 0,0,0 0 0,0,0 0 0 0 0 0 0 0 15.2406396085456 0 0 0 chimp,human,marmoset,orangutan,rabbit, lincRNA processed_transcript A549@0.0336935,AG04450@0.0323465,BJ@0.019345,GM12878@0.152234,H1HESC@0,HELAS3@0.162836,HEPG2@0.024679,HMEC@0,HSMM@0.005576,HUVEC@0.015356,K562@5.03134,MCF7@0.60148,NHEK@0.038676,NHLF@0,SKNSHRA@3.83933, 0 0 0 0 ENSG00000230880.1 ENST00000411746.1 chr1:142619123-142729975 4 645 110201 intergenic -1.19 0 0,0,0 0 0,0,0 0 0 0 0 1.36093138900736 0 0 21.0006261286195 0 0 0 chimp,human,macaque,marmoset,orangutan,rabbit, lincRNA processed_transcript A549@0.0336935,AG04450@0.0323465,BJ@0.019345,GM12878@0.152234,H1HESC@0,HELAS3@0.162836,HEPG2@0.024679,HMEC@0,HSMM@0.005576,HUVEC@0.015356,K562@5.03134,MCF7@0.60148,NHEK@0.038676,NHLF@0,SKNSHRA@3.83933, 0 0 0 0 ENSG00000203849.5 ENST00000369381.2 chr1:142620645-142714605 9 5777 88167 intergenic 2.00 0 0,0,0 0 0,0,0 0 0 0 10.5859442617275 0.174498395091134 0 16.0590271767353 24.2561729445257 0 0 0 chimp,human, processed_transcript processed_transcript A549@0.527361,AG04450@0.00362,BJ@0.0050725,GM12878@0.039936,H1HESC@0,HELAS3@0.0045885,HEPG2@0.988969,HMEC@0.004954,HSMM@0.00323,HUVEC@0.0039795,K562@0.174784,MCF7@0.14437,NHEK@0.00398467,NHLF@0.0029035,SKNSHRA@1.28987, 0 0 0 0 ENSG00000234978.1 ENST00000423385.1 chr1:142803224-142816004 3 1739 11037 intergenic -1.14 0 0,0,1 0 0,0,0 0 0 0 1.45485911443358 1.33478300262753 0 1.58769407705578 2.08788620096041 0 0 0 cat,chimp,dog,guinea_pig,horse,human,macaque,marmoset,orangutan,pig,rabbit, lincRNA processed_transcript A549@1.45158,AG04450@0.857549,BJ@0.268821,GM12878@1.41421,H1HESC@0,HELAS3@0.986272,HEPG2@0.565338,HMEC@0.491604,HSMM@0.594648,HUVEC@0.148929,K562@16.9094,MCF7@1.46947,NHEK@0.656695,NHLF@0.384881,SKNSHRA@3.60593, 35 3 0 0 ENSG00000231182.1 ENST00000424640.1 chr1:142950835-142956716 3 964 4913 intergenic -1.86 0 0,0,0 0 0,0,0 0 0 0 24.6514522821577 6.40403012416039 0 24.5435684647303 10.614899246896 0 0 0 cat,chimp,cow,dog,elephant,horse,human,macaque,orangutan,panda,pig, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0.0042555,HUVEC@0,K562@0.126941,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 40 3 22 3 ENSG00000232274.1 ENST00000422129.1 chr1:143118704-143194342 2 695 74941 intergenic -0.04 1 0,0,0 0 0,0,0 0 0 0 0 0.0612481819030971 0 0 42.2010114623504 0 0 0 chimp,cow,dog,guinea_pig,horse,human,macaque,marmoset,mouse,orangutan,panda,pig,rabbit, lincRNA lincRNA A549@20.0594,AG04450@0.361935,BJ@0.0519455,GM12878@1.13778,H1HESC@0.003083,HELAS3@1.23994,HEPG2@7.33558,HMEC@0.036342,HSMM@0.0371795,HUVEC@0.0349075,K562@2.47311,MCF7@1.76689,NHEK@0.013295,NHLF@0.171792,SKNSHRA@9.67764, 0 0 0 0 ENSG00000230850.2 ENST00000454861.1 chr1:143119061-143158077 3 1227 37785 intergenic 2.30 0 0,0,0 0 0,0,0 0 0 0 0 0 0 272.834555827221 42.3624189493185 0 0 0 chimp,dog,human,macaque,marmoset,orangutan, lincRNA processed_transcript A549@3.23123,AG04450@0.591733,BJ@0.728101,GM12878@2.44438,H1HESC@0,HELAS3@3.09483,HEPG2@2.45621,HMEC@0.432117,HSMM@0.44147,HUVEC@0.131715,K562@13.8264,MCF7@1.16486,NHEK@1.36161,NHLF@0.344131,SKNSHRA@7.64722, 0 0 0 0 ENSG00000230850.2 ENST00000436680.1 chr1:143119061-143206097 3 549 86483 intergenic -2.14 0 0,0,0 0 0,0,0 0 0 0 0 0.311737566920666 0 0 36.966293953725 0 0 0 chimp,cow,dog,human,macaque,marmoset,orangutan,pig,rat, lincRNA processed_transcript A549@3.23123,AG04450@0.591733,BJ@0.728101,GM12878@2.44438,H1HESC@0,HELAS3@3.09483,HEPG2@2.45621,HMEC@0.432117,HSMM@0.44147,HUVEC@0.131715,K562@13.8264,MCF7@1.16486,NHEK@1.36161,NHLF@0.344131,SKNSHRA@7.64722, 100 2 0 0 ENSG00000230850.2 ENST00000447407.1 chr1:143119061-143231756 4 651 112038 intergenic 0.91 0 0,0,1 0 0,0,0 0 0 0 0 1.13433834948857 0 0 29.9496599368072 0 0 0 cat,chimp,dog,guinea_pig,horse,human,macaque,marmoset,orangutan,pig,rabbit, lincRNA processed_transcript A549@3.23123,AG04450@0.591733,BJ@0.728101,GM12878@2.44438,H1HESC@0,HELAS3@3.09483,HEPG2@2.45621,HMEC@0.432117,HSMM@0.44147,HUVEC@0.131715,K562@13.8264,MCF7@1.16486,NHEK@1.36161,NHLF@0.344131,SKNSHRA@7.64722, 103 2 58 2 ENSG00000230850.2 ENST00000428930.1 chr1:143119061-143232318 3 611 112642 intergenic -4.22 0 0,0,0 0 0,0,0 0 0 0 0 1.12825589034286 0 0 29.7890662452726 0 0 0 cat,chimp,dog,elephant,horse,human,macaque,marmoset,orangutan,panda,pig,rabbit, lincRNA processed_transcript A549@3.23123,AG04450@0.591733,BJ@0.728101,GM12878@2.44438,H1HESC@0,HELAS3@3.09483,HEPG2@2.45621,HMEC@0.432117,HSMM@0.44147,HUVEC@0.131715,K562@13.8264,MCF7@1.16486,NHEK@1.36161,NHLF@0.344131,SKNSHRA@7.64722, 0 0 0 0 ENSG00000230850.2 ENST00000438000.1 chr1:143119061-143233417 4 1782 112568 intergenic -1.59 1 0,0,0 0 0,0,0 0 0 0 0 1.12899758368275 0 0 29.8086489943856 0 0 0 cat,chimp,cow,dog,elephant,guinea_pig,horse,human,macaque,marmoset,mouse,opossum,orangutan,panda,pig,rabbit,rat, lincRNA processed_transcript A549@3.23123,AG04450@0.591733,BJ@0.728101,GM12878@2.44438,H1HESC@0,HELAS3@3.09483,HEPG2@2.45621,HMEC@0.432117,HSMM@0.44147,HUVEC@0.131715,K562@13.8264,MCF7@1.16486,NHEK@1.36161,NHLF@0.344131,SKNSHRA@7.64722, 35 3 0 0 ENSG00000237291.1 ENST00000424474.1 chr1:143154493-143169960 2 846 14619 intergenic 0.81 0 0,0,0 0 0,0,0 0 0 0 0 0 0 250.460992907801 75.5702168410972 167.115 0 0 chimp,human,macaque,marmoset,orangutan, lincRNA lincRNA A549@0.228401,AG04450@0,BJ@0.027495,GM12878@0.099567,H1HESC@0,HELAS3@0.141675,HEPG2@0.224186,HMEC@0.520752,HSMM@0.012114,HUVEC@0.005317,K562@1.14832,MCF7@0.245654,NHEK@0.049084,NHLF@0.205983,SKNSHRA@0.760565, 0 0 0 0 ENSG00000232274.1 ENST00000437267.1 chr1:143183876-143194239 5 1883 8472 intergenic 10.84 0 0,0,0 0 0,0,0 0 0 0 0 0.541784702549575 0 167.93892724376 84.8301463644948 0 0 0 chimp,human,macaque,marmoset,orangutan, lincRNA lincRNA A549@20.0594,AG04450@0.361935,BJ@0.0519455,GM12878@1.13778,H1HESC@0.003083,HELAS3@1.23994,HEPG2@7.33558,HMEC@0.036342,HSMM@0.0371795,HUVEC@0.0349075,K562@2.47311,MCF7@1.76689,NHEK@0.013295,NHLF@0.171792,SKNSHRA@9.67764, 0 0 0 0 ENSG00000232274.1 ENST00000413897.1 chr1:143186762-143196803 7 1102 8927 intergenic 0.80 0 0,0,0 0 0,0,0 0 0 0 15.0235934664247 0.676599081438333 3.588 24.5807622504537 20.8610955528173 3.757 0 0 cat,chimp,dog,elephant,horse,human,macaque,marmoset,mouse,opossum,orangutan,pig,rabbit, lincRNA lincRNA A549@20.0594,AG04450@0.361935,BJ@0.0519455,GM12878@1.13778,H1HESC@0.003083,HELAS3@1.23994,HEPG2@7.33558,HMEC@0.036342,HSMM@0.0371795,HUVEC@0.0349075,K562@2.47311,MCF7@1.76689,NHEK@0.013295,NHLF@0.171792,SKNSHRA@9.67764, 0 0 0 0 ENSG00000232274.1 ENST00000420598.1 chr1:143188509-143195834 5 552 6765 intergenic -0.04 0 0,0,0 0 0,0,0 0 0 0 1.88405797101449 0.892830746489283 19.38 5.96014492753623 1.76555801921656 27.844 0 0 chimp,cow,dog,guinea_pig,human,macaque,marmoset,orangutan,pig,rabbit, lincRNA lincRNA A549@20.0594,AG04450@0.361935,BJ@0.0519455,GM12878@1.13778,H1HESC@0.003083,HELAS3@1.23994,HEPG2@7.33558,HMEC@0.036342,HSMM@0.0371795,HUVEC@0.0349075,K562@2.47311,MCF7@1.76689,NHEK@0.013295,NHLF@0.171792,SKNSHRA@9.67764, 0 0 0 0 ENSG00000232274.1 ENST00000447389.1 chr1:143188795-143196803 4 1406 6596 intergenic -0.04 0 0,0,0 0 0,0,0 0 0 0 11.199146514936 1.0794420861128 3.588 18.6600284495021 1.98302001212856 3.757 0 0 cat,chimp,cow,dog,elephant,guinea_pig,horse,human,macaque,marmoset,mouse,opossum,orangutan,pig,rabbit,rat, lincRNA lincRNA A549@20.0594,AG04450@0.361935,BJ@0.0519455,GM12878@1.13778,H1HESC@0.003083,HELAS3@1.23994,HEPG2@7.33558,HMEC@0.036342,HSMM@0.0371795,HUVEC@0.0349075,K562@2.47311,MCF7@1.76689,NHEK@0.013295,NHLF@0.171792,SKNSHRA@9.67764, 91 2 52 2 ENSG00000232336.1 ENST00000425124.1 chr1:143188828-143189695 2 468 397 intergenic 2.46 0 0,0,0 0 0,0,0 0 0 0 0 0 0 9.34615384615385 0 94.824 0 0 chimp,cow,elephant,horse,human,macaque,marmoset,orangutan, lincRNA lincRNA A549@0.170507,AG04450@0,BJ@0.014651,GM12878@0.059429,H1HESC@0,HELAS3@0.171539,HEPG2@0.050332,HMEC@0.015304,HSMM@0,HUVEC@0,K562@0.668143,MCF7@0.0302375,NHEK@0.074335,NHLF@0.0164755,SKNSHRA@0.11437, 0 0 0 0 ENSG00000232274.1 ENST00000412204.1 chr1:143189434-143211070 6 2497 19129 intergenic 1.39 0 0,0,0 0 0,0,0 0 0 0 15.9042851421706 1.16101207590569 0 37.511013215859 1.75816822625333 0 0 0 cat,chimp,cow,dog,elephant,guinea_pig,horse,human,macaque,marmoset,mouse,opossum,orangutan,panda,pig,rabbit,rat, lincRNA lincRNA A549@20.0594,AG04450@0.361935,BJ@0.0519455,GM12878@1.13778,H1HESC@0.003083,HELAS3@1.23994,HEPG2@7.33558,HMEC@0.036342,HSMM@0.0371795,HUVEC@0.0349075,K562@2.47311,MCF7@1.76689,NHEK@0.013295,NHLF@0.171792,SKNSHRA@9.67764, 0 0 0 0 ENSG00000232274.1 ENST00000452738.1 chr1:143193889-143195886 2 659 1336 intergenic -0.04 1 0,0,0 0 0,0,0 0 0 0 0.349013657056146 1.8937125748503 19.38 4.80576631259484 4.50898203592814 24.928 0 0 cat,chimp,cow,dog,elephant,guinea_pig,horse,human,macaque,marmoset,orangutan,panda,pig,rabbit,rat, lincRNA lincRNA A549@20.0594,AG04450@0.361935,BJ@0.0519455,GM12878@1.13778,H1HESC@0.003083,HELAS3@1.23994,HEPG2@7.33558,HMEC@0.036342,HSMM@0.0371795,HUVEC@0.0349075,K562@2.47311,MCF7@1.76689,NHEK@0.013295,NHLF@0.171792,SKNSHRA@9.67764, 0 0 0 0 ENSG00000232274.1 ENST00000435913.1 chr1:143193902-143196803 2 721 2178 intergenic -0.04 1 0,0,0 0 0,0,0 0 0 0 21.5201109570042 1.37281910009183 3.588 28.9625520110957 4.33516988062443 3.757 0 0 cat,chimp,cow,dog,elephant,guinea_pig,horse,human,macaque,marmoset,mouse,opossum,orangutan,panda,pig,rabbit,rat, lincRNA lincRNA A549@20.0594,AG04450@0.361935,BJ@0.0519455,GM12878@1.13778,H1HESC@0.003083,HELAS3@1.23994,HEPG2@7.33558,HMEC@0.036342,HSMM@0.0371795,HUVEC@0.0349075,K562@2.47311,MCF7@1.76689,NHEK@0.013295,NHLF@0.171792,SKNSHRA@9.67764, 0 0 0 0 ENSG00000225278.1 ENST00000439302.1 chr1:143211528-143272754 11 1152 60054 intergenic 5.33 0 0,0,0 0 0,0,0 0 0 0 0 2.23274053351983 0 0 33.8705165351184 0 0 0 chimp,cow,dog,elephant,guinea_pig,horse,human,macaque,marmoset,opossum,orangutan,pig,rabbit, processed_transcript processed_transcript A549@0.307973,AG04450@0.109548,BJ@0,GM12878@0.164267,H1HESC@0,HELAS3@0.013736,HEPG2@0.0353115,HMEC@0,HSMM@0.011318,HUVEC@0.0266475,K562@1.96494,MCF7@0.085894,NHEK@0,NHLF@0,SKNSHRA@0.480742, 96 2 0 0 ENSG00000225278.1 ENST00000437865.1 chr1:143211628-143226664 6 760 14266 intergenic 0 0 0,0,0 0 0,0,0 0 0 0 0 4.49249964951633 0 0 5.16718070937894 0 0 0 chimp,dog,guinea_pig,human,macaque,marmoset,orangutan,pig, processed_transcript processed_transcript A549@0.307973,AG04450@0.109548,BJ@0,GM12878@0.164267,H1HESC@0,HELAS3@0.013736,HEPG2@0.0353115,HMEC@0,HSMM@0.011318,HUVEC@0.0266475,K562@1.96494,MCF7@0.085894,NHEK@0,NHLF@0,SKNSHRA@0.480742, 0 0 0 0 ENSG00000225278.1 ENST00000422716.1 chr1:143213237-143240439 9 593 26593 intergenic 0 0 0,0,0 0 0,0,0 0 0 0 0 2.41003271537623 0 0 7.30699808220208 0 0 0 chimp,dog,human,macaque,marmoset,orangutan, processed_transcript processed_transcript A549@0.307973,AG04450@0.109548,BJ@0,GM12878@0.164267,H1HESC@0,HELAS3@0.013736,HEPG2@0.0353115,HMEC@0,HSMM@0.011318,HUVEC@0.0266475,K562@1.96494,MCF7@0.085894,NHEK@0,NHLF@0,SKNSHRA@0.480742, 145 2 91 2 ENSG00000225278.1 ENST00000456937.1 chr1:143216056-143226381 6 424 9891 intergenic -5.10 1 0,0,0 0 0,0,0 0 0 0 0 1.36639369123446 0 0 1.91487210595491 0 0 0 chimp,dog,horse,human,macaque,marmoset,orangutan,pig, processed_transcript processed_transcript A549@0.307973,AG04450@0.109548,BJ@0,GM12878@0.164267,H1HESC@0,HELAS3@0.013736,HEPG2@0.0353115,HMEC@0,HSMM@0.011318,HUVEC@0.0266475,K562@1.96494,MCF7@0.085894,NHEK@0,NHLF@0,SKNSHRA@0.480742, 0 0 0 0 ENSG00000225278.1 ENST00000435585.1 chr1:143216056-143226395 5 331 10000 intergenic 0 1 0,0,0 0 0,0,0 0 0 0 0 1.3515 0 0 1.894 0 0 0 chimp,guinea_pig,horse,human,macaque,marmoset,orangutan,pig, processed_transcript processed_transcript A549@0.307973,AG04450@0.109548,BJ@0,GM12878@0.164267,H1HESC@0,HELAS3@0.013736,HEPG2@0.0353115,HMEC@0,HSMM@0.011318,HUVEC@0.0266475,K562@1.96494,MCF7@0.085894,NHEK@0,NHLF@0,SKNSHRA@0.480742, 0 0 0 0 ENSG00000225278.1 ENST00000429121.1 chr1:143223331-143240429 8 650 16434 intergenic -1.37 0 0,0,0 0 0,0,0 0 0 0 0 0.822380430814166 0 0 8.25435073627845 0 0 0 chimp,human,macaque,marmoset,orangutan, processed_transcript processed_transcript A549@0.307973,AG04450@0.109548,BJ@0,GM12878@0.164267,H1HESC@0,HELAS3@0.013736,HEPG2@0.0353115,HMEC@0,HSMM@0.011318,HUVEC@0.0266475,K562@1.96494,MCF7@0.085894,NHEK@0,NHLF@0,SKNSHRA@0.480742, 0 0 0 0 ENSG00000225278.1 ENST00000427309.1 chr1:143229766-143233121 2 675 2678 intergenic -4.71 0 0,0,0 0 0,0,0 0 0 0 0 0 0 0 0 0 0 0 cat,chimp,cow,dog,elephant,horse,human,macaque,marmoset,orangutan,pig,rabbit, processed_transcript processed_transcript A549@0.307973,AG04450@0.109548,BJ@0,GM12878@0.164267,H1HESC@0,HELAS3@0.013736,HEPG2@0.0353115,HMEC@0,HSMM@0.011318,HUVEC@0.0266475,K562@1.96494,MCF7@0.085894,NHEK@0,NHLF@0,SKNSHRA@0.480742, 0 0 0 0 ENSG00000225278.1 ENST00000412196.1 chr1:143236905-143237715 2 136 672 intergenic 0 0 0,0,0 0 0,0,0 0 0 0 0 0 0 447.816176470588 84.3482142857143 0 0 0 cat,chimp,cow,dog,elephant,guinea_pig,horse,human,macaque,marmoset,mouse,orangutan,panda,pig,rabbit,rat, processed_transcript processed_transcript A549@0.307973,AG04450@0.109548,BJ@0,GM12878@0.164267,H1HESC@0,HELAS3@0.013736,HEPG2@0.0353115,HMEC@0,HSMM@0.011318,HUVEC@0.0266475,K562@1.96494,MCF7@0.085894,NHEK@0,NHLF@0,SKNSHRA@0.480742, 0 0 0 0 ENSG00000225278.1 ENST00000449527.1 chr1:143236905-143237715 2 118 690 intergenic 0 0 0,0,0 0 0,0,0 0 0 0 0 0 0 424.14406779661 97.8782608695652 0 0 0 cat,chimp,cow,dog,elephant,guinea_pig,horse,human,macaque,marmoset,mouse,orangutan,panda,pig,rabbit,rat, processed_transcript processed_transcript A549@0.307973,AG04450@0.109548,BJ@0,GM12878@0.164267,H1HESC@0,HELAS3@0.013736,HEPG2@0.0353115,HMEC@0,HSMM@0.011318,HUVEC@0.0266475,K562@1.96494,MCF7@0.085894,NHEK@0,NHLF@0,SKNSHRA@0.480742, 0 0 0 0 ENSG00000225278.1 ENST00000456568.1 chr1:143236905-143237715 2 210 598 intergenic 0 0 0,0,0 0 0,0,0 0 0 0 0 0 0 502.5 20.1672240802676 0 0 0 cat,chimp,cow,dog,elephant,guinea_pig,horse,human,macaque,marmoset,mouse,orangutan,panda,pig,rabbit,rat, processed_transcript processed_transcript A549@0.307973,AG04450@0.109548,BJ@0,GM12878@0.164267,H1HESC@0,HELAS3@0.013736,HEPG2@0.0353115,HMEC@0,HSMM@0.011318,HUVEC@0.0266475,K562@1.96494,MCF7@0.085894,NHEK@0,NHLF@0,SKNSHRA@0.480742, 0 0 126 2 ENSG00000225278.1 ENST00000453561.1 chr1:143236905-143240420 2 306 3207 intergenic 0 0 0,0,0 0 0,0,0 0 0 0 0 0 0 344.852941176471 3.76052385406922 0 0 0 chimp,cow,elephant,guinea_pig,human,macaque,marmoset,mouse,orangutan,rabbit, processed_transcript processed_transcript A549@0.307973,AG04450@0.109548,BJ@0,GM12878@0.164267,H1HESC@0,HELAS3@0.013736,HEPG2@0.0353115,HMEC@0,HSMM@0.011318,HUVEC@0.0266475,K562@1.96494,MCF7@0.085894,NHEK@0,NHLF@0,SKNSHRA@0.480742, 190 2 0 0 ENSG00000225278.1 ENST00000416367.1 chr1:143236905-143275032 6 942 37175 intergenic 9.70 0 0,1,0 0 0,0,0 0 0 0 0 1.88285137861466 0 112.022292993631 49.8131809011432 0 0 0 chimp,human,macaque,marmoset,orangutan, processed_transcript processed_transcript A549@0.307973,AG04450@0.109548,BJ@0,GM12878@0.164267,H1HESC@0,HELAS3@0.013736,HEPG2@0.0353115,HMEC@0,HSMM@0.011318,HUVEC@0.0266475,K562@1.96494,MCF7@0.085894,NHEK@0,NHLF@0,SKNSHRA@0.480742, 0 0 0 0 ENSG00000242569.1 ENST00000424820.1 chr1:143347958-143365041 7 506 16565 intergenic 0 0 0,0,0 0 0,0,0 0 0 0 0 1.55466344702686 0 8.24110671936759 9.04515544823423 0 0 0 chimp,human,macaque,marmoset,orangutan, lincRNA lincRNA A549@0.231426,AG04450@0.246798,BJ@0,GM12878@0.0637405,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0.0224385,HUVEC@0,K562@1.40167,MCF7@0.204358,NHEK@0,NHLF@0,SKNSHRA@0.6146, 145 2 91 2 ENSG00000242569.1 ENST00000430699.1 chr1:143347970-143376699 11 932 27777 intergenic -2.10 0 0,0,1 0 0,0,0 0 0 0 0 1.4493645822083 0 4.47424892703863 6.02224862296144 0 0 0 chimp,elephant,human,macaque,marmoset,orangutan,panda, lincRNA lincRNA A549@0.231426,AG04450@0.246798,BJ@0,GM12878@0.0637405,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0.0224385,HUVEC@0,K562@1.40167,MCF7@0.204358,NHEK@0,NHLF@0,SKNSHRA@0.6146, 96 2 0 0 ENSG00000242569.1 ENST00000416527.1 chr1:143347979-143351483 2 306 3196 intergenic 0 0 0,0,0 0 0,0,0 0 0 0 0 0 0 344.852941176471 3.96214017521902 0 0 0 cat,chimp,cow,elephant,guinea_pig,human,macaque,marmoset,mouse,orangutan,rabbit, lincRNA lincRNA A549@0.231426,AG04450@0.246798,BJ@0,GM12878@0.0637405,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0.0224385,HUVEC@0,K562@1.40167,MCF7@0.204358,NHEK@0,NHLF@0,SKNSHRA@0.6146, 0 0 0 0 ENSG00000242569.1 ENST00000421330.1 chr1:143348740-143351483 3 356 2383 intergenic 0 0 0,0,0 0 0,0,0 0 0 0 0 0 0 296.418539325843 5.31389005455308 0 0 0 cat,chimp,cow,dog,guinea_pig,horse,human,macaque,marmoset,orangutan, lincRNA lincRNA A549@0.231426,AG04450@0.246798,BJ@0,GM12878@0.0637405,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0.0224385,HUVEC@0,K562@1.40167,MCF7@0.204358,NHEK@0,NHLF@0,SKNSHRA@0.6146, 190 2 126 2 ENSG00000185044.8 ENST00000423249.1 chr1:143354963-143465438 4 1785 108684 intergenic -1.59 1 0,0,0 0 0,0,0 0 0 0 4.68627450980392 0.759651834676677 0 7.94285714285714 30.4895292775386 0 0 0 cat,chimp,cow,dog,elephant,guinea_pig,horse,human,macaque,marmoset,mouse,opossum,orangutan,panda,pig,rabbit,rat, lincRNA processed_transcript A549@3.11566,AG04450@0.463155,BJ@0.670953,GM12878@3.98111,H1HESC@0.0026395,HELAS3@4.06897,HEPG2@3.81055,HMEC@0.67813,HSMM@1.15747,HUVEC@0.478401,K562@56.5495,MCF7@6.10433,NHEK@3.33476,NHLF@0.569365,SKNSHRA@20.4419, 35 3 0 0 ENSG00000242569.1 ENST00000431621.1 chr1:143355262-143379903 9 2600 22025 intergenic 2.54 1 0,0,1 0 0,0,0 0 0 0 184.828846153846 1.6 8.365 12.8473076923077 1.80980703745743 9.73 0 0 cat,chimp,cow,dog,elephant,guinea_pig,horse,human,macaque,marmoset,mouse,opossum,orangutan,panda,pig,rabbit,rat, lincRNA lincRNA A549@0.231426,AG04450@0.246798,BJ@0,GM12878@0.0637405,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0.0224385,HUVEC@0,K562@1.40167,MCF7@0.204358,NHEK@0,NHLF@0,SKNSHRA@0.6146, 0 0 0 0 ENSG00000185044.8 ENST00000443548.1 chr1:143356065-143467532 4 677 110784 intergenic -3.10 0 0,1,0 1 0,0,0 0 0 0 0 0.745252021952629 0 0 29.9115756787984 0 0 0 cat,chimp,dog,elephant,horse,human,macaque,marmoset,orangutan,panda,pig,rabbit, lincRNA processed_transcript A549@3.11566,AG04450@0.463155,BJ@0.670953,GM12878@3.98111,H1HESC@0.0026395,HELAS3@4.06897,HEPG2@3.81055,HMEC@0.67813,HSMM@1.15747,HUVEC@0.478401,K562@56.5495,MCF7@6.10433,NHEK@3.33476,NHLF@0.569365,SKNSHRA@20.4419, 0 0 0 0 ENSG00000185044.8 ENST00000424068.1 chr1:143356625-143467304 5 1109 109562 intergenic -1.59 0 0,1,0 0 0,0,0 0 0 0 0 0.753564191964367 0 0 30.2451945017433 0 0 0 cat,chimp,dog,human,marmoset, lincRNA processed_transcript A549@3.11566,AG04450@0.463155,BJ@0.670953,GM12878@3.98111,H1HESC@0.0026395,HELAS3@4.06897,HEPG2@3.81055,HMEC@0.67813,HSMM@1.15747,HUVEC@0.478401,K562@56.5495,MCF7@6.10433,NHEK@3.33476,NHLF@0.569365,SKNSHRA@20.4419, 103 2 58 2 ENSG00000242569.1 ENST00000444754.1 chr1:143361708-143376737 6 770 14249 intergenic 0 0 0,0,1 0 0,0,0 0 0 0 0 2.23833251456243 0 0 2.55084567338059 0 0 0 chimp,guinea_pig,human,macaque,marmoset,orangutan, lincRNA lincRNA A549@0.231426,AG04450@0.246798,BJ@0,GM12878@0.0637405,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0.0224385,HUVEC@0,K562@1.40167,MCF7@0.204358,NHEK@0,NHLF@0,SKNSHRA@0.6146, 0 0 0 0 ENSG00000242569.1 ENST00000446530.1 chr1:143361974-143372316 5 332 10002 intergenic 0 0 0,0,0 0 0,0,0 0 0 0 10.078313253012 1.73845230953809 0 10.2469879518072 1.88962207558488 0 0 0 chimp,dog,horse,human,macaque,marmoset,orangutan,pig, lincRNA lincRNA A549@0.231426,AG04450@0.246798,BJ@0,GM12878@0.0637405,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0.0224385,HUVEC@0,K562@1.40167,MCF7@0.204358,NHEK@0,NHLF@0,SKNSHRA@0.6146, 0 0 0 0 ENSG00000242569.1 ENST00000411775.1 chr1:143361977-143375173 6 350 12836 intergenic 0 0 0,0,1 0 0,0,0 0 0 0 0 2.48473044562169 0 0 2.83164537239015 0 0 0 chimp,dog,human,macaque,marmoset,orangutan,pig, lincRNA lincRNA A549@0.231426,AG04450@0.246798,BJ@0,GM12878@0.0637405,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0.0224385,HUVEC@0,K562@1.40167,MCF7@0.204358,NHEK@0,NHLF@0,SKNSHRA@0.6146, 0 0 0 0 ENSG00000242569.1 ENST00000442663.1 chr1:143361991-143368190 4 275 5918 intergenic 0 0 0,0,0 0 0,0,0 0 0 0 0 2.93815478202095 0 0 3.19364650219669 0 0 0 chimp,human,macaque,marmoset,orangutan, lincRNA lincRNA A549@0.231426,AG04450@0.246798,BJ@0,GM12878@0.0637405,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0.0224385,HUVEC@0,K562@1.40167,MCF7@0.204358,NHEK@0,NHLF@0,SKNSHRA@0.6146, 0 0 0 0 ENSG00000238261.3 ENST00000428624.1 chr1:143377281-143398889 6 2489 19109 intergenic 2.54 0 0,0,0 0 0,0,0 0 0 0 16.8248292486943 0.432414045737611 0 42.9642426677381 1.57417970589774 0 0 0 cat,chimp,cow,dog,elephant,guinea_pig,horse,human,macaque,marmoset,mouse,opossum,orangutan,pig,rabbit,rat, lincRNA lincRNA A549@12.0782,AG04450@0.28261,BJ@0.023417,GM12878@0.947101,H1HESC@0.0015425,HELAS3@1.33597,HEPG2@4.34459,HMEC@0.029039,HSMM@0.0424425,HUVEC@0.007733,K562@4.17963,MCF7@2.07409,NHEK@0.00729167,NHLF@0.0709845,SKNSHRA@6.43628, 0 0 0 0 ENSG00000238261.3 ENST00000423394.1 chr1:143378736-143380964 2 677 1549 intergenic -8.46 0 0,0,1 0 0,0,0 0 0 0 26.5553914327917 0.932859909619109 19.597 29.1698670605613 1.11684958037444 21.926 0 0 cat,chimp,cow,dog,elephant,guinea_pig,horse,human,macaque,marmoset,mouse,opossum,orangutan,panda,pig,rabbit, lincRNA lincRNA A549@12.0782,AG04450@0.28261,BJ@0.023417,GM12878@0.947101,H1HESC@0.0015425,HELAS3@1.33597,HEPG2@4.34459,HMEC@0.029039,HSMM@0.0424425,HUVEC@0.007733,K562@4.17963,MCF7@2.07409,NHEK@0.00729167,NHLF@0.0709845,SKNSHRA@6.43628, 0 0 0 0 ENSG00000185044.8 ENST00000432361.1 chr1:143382245-143467632 4 1334 84047 intergenic 0.82 0 0,1,0 1 0,0,0 0 0 0 0 0.135150570514117 0 0 38.4740323866408 0 0 0 chimp,human,marmoset,orangutan, lincRNA processed_transcript A549@3.11566,AG04450@0.463155,BJ@0.670953,GM12878@3.98111,H1HESC@0.0026395,HELAS3@4.06897,HEPG2@3.81055,HMEC@0.67813,HSMM@1.15747,HUVEC@0.478401,K562@56.5495,MCF7@6.10433,NHEK@3.33476,NHLF@0.569365,SKNSHRA@20.4419, 100 2 0 0 ENSG00000238261.3 ENST00000412492.1 chr1:143391526-143392104 2 370 206 intergenic -6.31 0 0,0,0 0 0,0,0 0 0 0 13.5648648648649 0 0 164.245945945946 28.868932038835 0 0 0 cat,chimp,cow,dog,elephant,guinea_pig,horse,human,macaque,marmoset,mouse,opossum,orangutan,panda,pig,rabbit,rat, lincRNA lincRNA A549@12.0782,AG04450@0.28261,BJ@0.023417,GM12878@0.947101,H1HESC@0.0015425,HELAS3@1.33597,HEPG2@4.34459,HMEC@0.029039,HSMM@0.0424425,HUVEC@0.007733,K562@4.17963,MCF7@2.07409,NHEK@0.00729167,NHLF@0.0709845,SKNSHRA@6.43628, 0 0 0 0 ENSG00000238261.3 ENST00000421640.1 chr1:143391568-143394444 2 734 2140 intergenic -0.04 1 0,0,0 0 0,0,0 0 0 0 1.95367847411444 1.34018691588785 3.346 76.3160762942779 7.10046728971963 4.438 0 0 cat,chimp,cow,dog,elephant,guinea_pig,horse,human,macaque,marmoset,mouse,opossum,orangutan,panda,pig,rabbit,rat, lincRNA lincRNA A549@12.0782,AG04450@0.28261,BJ@0.023417,GM12878@0.947101,H1HESC@0.0015425,HELAS3@1.33597,HEPG2@4.34459,HMEC@0.029039,HSMM@0.0424425,HUVEC@0.007733,K562@4.17963,MCF7@2.07409,NHEK@0.00729167,NHLF@0.0709845,SKNSHRA@6.43628, 0 0 0 0 ENSG00000238261.3 ENST00000458155.1 chr1:143391568-143399528 4 1406 6548 intergenic -0.04 0 0,0,0 0 0,0,0 0 0 0 3.0597439544808 0.530238240684178 3.346 46.4182076813656 3.65195479535736 4.438 0 0 cat,chimp,cow,dog,elephant,guinea_pig,horse,human,macaque,marmoset,opossum,orangutan,pig,rabbit,rat, lincRNA lincRNA A549@12.0782,AG04450@0.28261,BJ@0.023417,GM12878@0.947101,H1HESC@0.0015425,HELAS3@1.33597,HEPG2@4.34459,HMEC@0.029039,HSMM@0.0424425,HUVEC@0.007733,K562@4.17963,MCF7@2.07409,NHEK@0.00729167,NHLF@0.0709845,SKNSHRA@6.43628, 91 2 52 2 ENSG00000238261.3 ENST00000448665.1 chr1:143391568-143399813 4 497 7742 intergenic -1.06 0 0,0,0 0 0,0,0 0 0 0 3.88329979879276 0.72281064324464 3.346 122.541247484909 3.57853267889434 4.438 0 0 cat,chimp,cow,dog,guinea_pig,human,macaque,marmoset,mouse,orangutan,pig,rabbit, lincRNA lincRNA A549@12.0782,AG04450@0.28261,BJ@0.023417,GM12878@0.947101,H1HESC@0.0015425,HELAS3@1.33597,HEPG2@4.34459,HMEC@0.029039,HSMM@0.0424425,HUVEC@0.007733,K562@4.17963,MCF7@2.07409,NHEK@0.00729167,NHLF@0.0709845,SKNSHRA@6.43628, 0 0 0 0 ENSG00000238261.3 ENST00000448844.1 chr1:143391568-143401533 7 1102 8851 intergenic 0.80 0 0,0,0 0 0,0,0 0 0 0 4.35390199637024 0.308213761156931 3.346 63.6578947368421 25.8234097842052 4.438 0 0 cat,chimp,cow,dog,elephant,guinea_pig,human,macaque,marmoset,opossum,orangutan,pig,rabbit,rat, lincRNA lincRNA A549@12.0782,AG04450@0.28261,BJ@0.023417,GM12878@0.947101,H1HESC@0.0015425,HELAS3@1.33597,HEPG2@4.34459,HMEC@0.029039,HSMM@0.0424425,HUVEC@0.007733,K562@4.17963,MCF7@2.07409,NHEK@0.00729167,NHLF@0.0709845,SKNSHRA@6.43628, 0 0 0 0 ENSG00000238261.3 ENST00000456460.1 chr1:143392443-143399814 3 385 6982 intergenic -3.33 0 0,0,0 0 0,0,0 0 0 0 7.44935064935065 0.497278716700086 5.019 24.0207792207792 2.573188198224 67.031 0 0 cat,chimp,cow,dog,guinea_pig,horse,human,macaque,marmoset,orangutan,rabbit,rat, lincRNA lincRNA A549@12.0782,AG04450@0.28261,BJ@0.023417,GM12878@0.947101,H1HESC@0.0015425,HELAS3@1.33597,HEPG2@4.34459,HMEC@0.029039,HSMM@0.0424425,HUVEC@0.007733,K562@4.17963,MCF7@2.07409,NHEK@0.00729167,NHLF@0.0709845,SKNSHRA@6.43628, 0 0 0 0 ENSG00000238261.3 ENST00000415543.1 chr1:143392450-143394444 2 659 1333 intergenic -0.04 1 0,0,0 0 0,0,0 0 0 0 4.35204855842185 0 5.019 11.556904400607 0 68.391 0 0 cat,chimp,cow,dog,elephant,horse,human,macaque,marmoset,orangutan,panda,pig,rabbit,rat, lincRNA lincRNA A549@12.0782,AG04450@0.28261,BJ@0.023417,GM12878@0.947101,H1HESC@0.0015425,HELAS3@1.33597,HEPG2@4.34459,HMEC@0.029039,HSMM@0.0424425,HUVEC@0.007733,K562@4.17963,MCF7@2.07409,NHEK@0.00729167,NHLF@0.0709845,SKNSHRA@6.43628, 0 0 0 0 ENSG00000238261.3 ENST00000433980.1 chr1:143394094-143404415 5 1882 8431 intergenic 11.11 1 0,0,0 0 0,0,0 0 0 0 0 0.411813545249674 0 195.80605738576 91.3845332700747 0 0 0 chimp,human,macaque,marmoset,orangutan, lincRNA lincRNA A549@12.0782,AG04450@0.28261,BJ@0.023417,GM12878@0.947101,H1HESC@0.0015425,HELAS3@1.33597,HEPG2@4.34459,HMEC@0.029039,HSMM@0.0424425,HUVEC@0.007733,K562@4.17963,MCF7@2.07409,NHEK@0.00729167,NHLF@0.0709845,SKNSHRA@6.43628, 0 0 0 0 ENSG00000238261.3 ENST00000431700.1 chr1:143394151-143399814 4 288 5369 intergenic 0 0 0,0,0 0 0,0,0 0 0 0 0 0.646675358539765 0 0 3.34624697336562 0 0 0 chimp,human,macaque,marmoset,orangutan, lincRNA lincRNA A549@12.0782,AG04450@0.28261,BJ@0.023417,GM12878@0.947101,H1HESC@0.0015425,HELAS3@1.33597,HEPG2@4.34459,HMEC@0.029039,HSMM@0.0424425,HUVEC@0.007733,K562@4.17963,MCF7@2.07409,NHEK@0.00729167,NHLF@0.0709845,SKNSHRA@6.43628, 0 0 0 0 ENSG00000185044.8 ENST00000443766.1 chr1:143399412-143467658 6 780 67456 intergenic -2.71 0 0,1,1 1 0,0,0 0 0 0 0 0 0 32.374358974359 46.1526624762808 0 0 0 chimp,human,macaque,orangutan, lincRNA processed_transcript A549@3.11566,AG04450@0.463155,BJ@0.670953,GM12878@3.98111,H1HESC@0.0026395,HELAS3@4.06897,HEPG2@3.81055,HMEC@0.67813,HSMM@1.15747,HUVEC@0.478401,K562@56.5495,MCF7@6.10433,NHEK@3.33476,NHLF@0.569365,SKNSHRA@20.4419, 144 2 90 2 ENSG00000185044.8 ENST00000436326.1 chr1:143429872-143467644 4 1301 36465 intergenic 2.23 0 0,1,0 1 0,0,0 0 0 0 0 0 0 268.913143735588 42.616646098999 0 0 0 chimp,human,macaque,marmoset,orangutan, lincRNA processed_transcript A549@3.11566,AG04450@0.463155,BJ@0.670953,GM12878@3.98111,H1HESC@0.0026395,HELAS3@4.06897,HEPG2@3.81055,HMEC@0.67813,HSMM@1.15747,HUVEC@0.478401,K562@56.5495,MCF7@6.10433,NHEK@3.33476,NHLF@0.569365,SKNSHRA@20.4419, 0 0 0 0 ENSG00000185044.8 ENST00000419027.1 chr1:143464645-143467613 2 835 2131 intergenic 4.13 0 0,1,0 1 0,0,0 0 0 0 0 0 0 0 0 0 0 0 chimp,human,orangutan, lincRNA processed_transcript A549@3.11566,AG04450@0.463155,BJ@0.670953,GM12878@3.98111,H1HESC@0.0026395,HELAS3@4.06897,HEPG2@3.81055,HMEC@0.67813,HSMM@1.15747,HUVEC@0.478401,K562@56.5495,MCF7@6.10433,NHEK@3.33476,NHLF@0.569365,SKNSHRA@20.4419, 121 2 0 0 ENSG00000185044.8 ENST00000329536.8 chr1:143465380-143467604 2 298 1924 intergenic 0 0 0,1,0 1 0,0,0 0 0 0 0 0 0 0 0 0 0 0 chimp,human,macaque,marmoset,orangutan,rabbit, lincRNA processed_transcript A549@3.11566,AG04450@0.463155,BJ@0.670953,GM12878@3.98111,H1HESC@0.0026395,HELAS3@4.06897,HEPG2@3.81055,HMEC@0.67813,HSMM@1.15747,HUVEC@0.478401,K562@56.5495,MCF7@6.10433,NHEK@3.33476,NHLF@0.569365,SKNSHRA@20.4419, 0 0 0 0 ENSG00000226897.1 ENST00000429884.1 chr1:143498344-143517299 4 358 18591 intergenic -1.83 0 0,0,0 0 0,0,0 0 0 0 0 7.81345812489915 0 0 10.7322360281857 0 0 0 chimp,human,macaque, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0.012828,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 185 2 0 0 ENSG00000235566.1 ENST00000418607.1 chr1:143527405-143533272 3 961 4902 intergenic 2.71 1 0,0,0 0 0,0,0 0 0 0 26.5275754422477 4.00999592003264 0 26.6347554630593 4.2578539371685 0 0 0 cat,chimp,cow,dog,elephant,horse,human,macaque,mouse,orangutan,panda,pig,rabbit, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0.0101425,MCF7@0,NHEK@0,NHLF@0.004003,SKNSHRA@0, 40 3 22 3 ENSG00000235566.1 ENST00000443054.1 chr1:143527885-143529223 2 303 1033 intergenic 0 0 0,0,0 0 0,0,0 0 0 0 35.8019801980198 4.26621490803485 2.151 36.5412541254125 4.35430784123911 3.012 0 0 chimp,cow,dog,horse,human,macaque,orangutan,panda,pig, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0.0101425,MCF7@0,NHEK@0,NHLF@0.004003,SKNSHRA@0, 0 0 0 0 ENSG00000223804.1 ENST00000440199.1 chr1:143647638-143663987 2 501 15846 intergenic 2.01 0 0,0,0 0 0,0,0 0 0 0 0 0 0 0 0 0 0 0 chimp,human,macaque,orangutan, lincRNA processed_transcript A549@0.576924,AG04450@1.37555,BJ@0.127466,GM12878@0.790536,H1HESC@0.635753,HELAS3@0.091581,HEPG2@0.122352,HMEC@0.585446,HSMM@0.421238,HUVEC@0.040795,K562@0.092485,MCF7@0.0556,NHEK@1.22728,NHLF@0.189536,SKNSHRA@0.160284, 0 0 0 0 ENSG00000223804.1 ENST00000445753.1 chr1:143647639-143744410 4 2206 94559 intergenic 8.71 0 0,1,0 0 0,0,0 0 0 0 59.4029918404352 6.26018676170433 397.023 61.4873073436083 27.0024006176038 417.452 0 0 chimp,human,macaque,marmoset,orangutan, lincRNA processed_transcript A549@0.576924,AG04450@1.37555,BJ@0.127466,GM12878@0.790536,H1HESC@0.635753,HELAS3@0.091581,HEPG2@0.122352,HMEC@0.585446,HSMM@0.421238,HUVEC@0.040795,K562@0.092485,MCF7@0.0556,NHEK@1.22728,NHLF@0.189536,SKNSHRA@0.160284, 69 2 0 0 ENSG00000231734.3 ENST00000432384.1 chr1:143687097-143705763 3 751 17911 intergenic -0.72 0 0,0,0 0 0,0,0 0 0 0 42.1664447403462 1.15459773323656 0 190.878828229028 5.85293953436436 0 0 0 chimp,guinea_pig,horse,human,macaque,marmoset,orangutan, processed_transcript processed_transcript A549@0.377476,AG04450@0.167558,BJ@0.19669,GM12878@0.559258,H1HESC@0.162094,HELAS3@0.267579,HEPG2@0.85673,HMEC@0.086297,HSMM@0.227732,HUVEC@0.213842,K562@0.118353,MCF7@0.495579,NHEK@0.50245,NHLF@0.339924,SKNSHRA@0.057072, 0 0 0 0 ENSG00000231734.3 ENST00000457439.1 chr1:143687152-143713485 4 666 25661 intergenic 7.04 0 0,0,0 0 0,0,0 0 0 0 86.8363363363363 3.55672031487471 0 321.442942942943 8.16737461517478 0 0 0 cat,chimp,cow,dog,elephant,guinea_pig,horse,human,macaque,mouse,orangutan,panda,rabbit, processed_transcript processed_transcript A549@0.377476,AG04450@0.167558,BJ@0.19669,GM12878@0.559258,H1HESC@0.162094,HELAS3@0.267579,HEPG2@0.85673,HMEC@0.086297,HSMM@0.227732,HUVEC@0.213842,K562@0.118353,MCF7@0.495579,NHEK@0.50245,NHLF@0.339924,SKNSHRA@0.057072, 0 0 0 0 ENSG00000231734.3 ENST00000426533.1 chr1:143687158-143712593 7 896 24527 intergenic -1.24 0 0,0,0 0 0,0,0 0 0 0 98.7868303571429 1.99518897541485 0 260.332589285714 6.22909446732173 0 0 0 chimp,elephant,horse,human,macaque,marmoset,orangutan, processed_transcript processed_transcript A549@0.377476,AG04450@0.167558,BJ@0.19669,GM12878@0.559258,H1HESC@0.162094,HELAS3@0.267579,HEPG2@0.85673,HMEC@0.086297,HSMM@0.227732,HUVEC@0.213842,K562@0.118353,MCF7@0.495579,NHEK@0.50245,NHLF@0.339924,SKNSHRA@0.057072, 20 4 13 4 ENSG00000231734.3 ENST00000411954.1 chr1:143687243-143716941 6 1051 28637 intergenic 7.16 0 0,0,0 0 0,0,0 0 0 0 92.1579448144624 1.81471522855048 0 244.267364414843 5.82574990397039 0 0 0 cat,chimp,dog,guinea_pig,human,macaque,marmoset,mouse,orangutan,panda, processed_transcript processed_transcript A549@0.377476,AG04450@0.167558,BJ@0.19669,GM12878@0.559258,H1HESC@0.162094,HELAS3@0.267579,HEPG2@0.85673,HMEC@0.086297,HSMM@0.227732,HUVEC@0.213842,K562@0.118353,MCF7@0.495579,NHEK@0.50245,NHLF@0.339924,SKNSHRA@0.057072, 41 3 23 3 ENSG00000231734.3 ENST00000455004.1 chr1:143699873-143713999 6 1517 12599 intergenic 7.67 0 0,0,0 0 0,0,0 0 0 0 72.4212261041529 3.05206762441464 0 198.550428477258 9.66457655369474 0 0 0 cat,chimp,cow,human,macaque,marmoset,orangutan,panda, processed_transcript processed_transcript A549@0.377476,AG04450@0.167558,BJ@0.19669,GM12878@0.559258,H1HESC@0.162094,HELAS3@0.267579,HEPG2@0.85673,HMEC@0.086297,HSMM@0.227732,HUVEC@0.213842,K562@0.118353,MCF7@0.495579,NHEK@0.50245,NHLF@0.339924,SKNSHRA@0.057072, 7 6 4 6 ENSG00000231734.3 ENST00000417260.1 chr1:143699873-143720401 7 1393 19123 intergenic 7.67 0 0,0,1 0 0,0,0 0 0 0 39.6669059583632 4.90022486011609 0 440.600143575018 16.7645766877582 0 0 0 chimp,human,marmoset,orangutan, processed_transcript processed_transcript A549@0.377476,AG04450@0.167558,BJ@0.19669,GM12878@0.559258,H1HESC@0.162094,HELAS3@0.267579,HEPG2@0.85673,HMEC@0.086297,HSMM@0.227732,HUVEC@0.213842,K562@0.118353,MCF7@0.495579,NHEK@0.50245,NHLF@0.339924,SKNSHRA@0.057072, 1 96 0 0 ENSG00000226637.1 ENST00000442423.1 chr1:143719663-143721171 2 418 1088 intergenic -2.43 0 0,1,1 0 0,0,0 0 0 0 0 0 2.728 706.715311004785 750.241727941176 347.927 0 0 chimp,cow,dog,human,macaque,marmoset,orangutan,rabbit, lincRNA processed_transcript A549@0.670917,AG04450@0.181402,BJ@0.238464,GM12878@2.86291,H1HESC@0.405475,HELAS3@1.49215,HEPG2@0.672405,HMEC@0.088684,HSMM@0.139523,HUVEC@0.005841,K562@0.033617,MCF7@0.0717555,NHEK@0.767732,NHLF@0.037267,SKNSHRA@0, 0 0 0 0 ENSG00000223804.1 ENST00000418192.1 chr1:143743240-143744355 2 207 906 intergenic 0 0 0,1,0 0 0,0,0 0 0 0 601.908212560386 127.377483443709 431.508 626.980676328502 136.742825607064 453.147 0 0 chimp,cow,dog,elephant,guinea_pig,horse,human,macaque,marmoset,mouse,opossum,orangutan,panda,pig,rabbit, lincRNA processed_transcript A549@0.576924,AG04450@1.37555,BJ@0.127466,GM12878@0.790536,H1HESC@0.635753,HELAS3@0.091581,HEPG2@0.122352,HMEC@0.585446,HSMM@0.421238,HUVEC@0.040795,K562@0.092485,MCF7@0.0556,NHEK@1.22728,NHLF@0.189536,SKNSHRA@0.160284, 0 0 0 0 ENSG00000223804.1 ENST00000440862.1 chr1:143744199-143744717 2 305 211 intergenic 0 0 0,1,0 0 0,0,0 0 0 0 631.052459016393 607.563981042654 207.387 642.245901639344 625.194312796209 225.312 0 0 chimp,cow,elephant,guinea_pig,human,macaque,marmoset,mouse,opossum,orangutan,panda,pig,rabbit,rat, lincRNA processed_transcript A549@0.576924,AG04450@1.37555,BJ@0.127466,GM12878@0.790536,H1HESC@0.635753,HELAS3@0.091581,HEPG2@0.122352,HMEC@0.585446,HSMM@0.421238,HUVEC@0.040795,K562@0.092485,MCF7@0.0556,NHEK@1.22728,NHLF@0.189536,SKNSHRA@0.160284, 14 5 9 5 ENSG00000223804.1 ENST00000429388.1 chr1:143744199-143745417 2 185 1031 intergenic 0 0 0,0,0 0 0,0,0 0 0 0 335.52972972973 453.197866149369 0 347.302702702703 475.402521823472 0 0 0 chimp,cow,elephant,human,macaque,marmoset,orangutan,pig,rabbit, lincRNA processed_transcript A549@0.576924,AG04450@1.37555,BJ@0.127466,GM12878@0.790536,H1HESC@0.635753,HELAS3@0.091581,HEPG2@0.122352,HMEC@0.585446,HSMM@0.421238,HUVEC@0.040795,K562@0.092485,MCF7@0.0556,NHEK@1.22728,NHLF@0.189536,SKNSHRA@0.160284, 0 0 0 0 ENSG00000224363.1 ENST00000441760.1 chr1:144089214-144091946 2 2173 557 intergenic 0.04 0 0,0,0 0 0,0,0 0 0 0 89.7017947537966 133.825852782765 0 105.182236539347 85.6768402154399 0 0 0 cat,chimp,cow,dog,elephant,guinea_pig,horse,human,macaque,marmoset,orangutan,panda, lincRNA lincRNA A549@0.003101,AG04450@0.034852,BJ@0.0062655,GM12878@0.0018535,H1HESC@0.0207535,HELAS3@0.0086735,HEPG2@0.0025085,HMEC@0,HSMM@0.001892,HUVEC@0.00545,K562@0.057216,MCF7@0.0018905,NHEK@0,NHLF@0,SKNSHRA@0.0147915, 33 3 38 2 ENSG00000235398.1 ENST00000426301.1 chr1:144275918-144341077 7 2077 63070 intronic 15.34 0 0,0,0 0 0,0,0 0 0 0 210.57149735195 9.44832725543048 142.96 284.197400096293 11.7090375772951 145.08 0 0 chimp,human,macaque,orangutan, lincRNA processed_transcript A549@2.71843,AG04450@7.1729,BJ@1.28236,GM12878@19.4352,H1HESC@9.85727,HELAS3@3.08705,HEPG2@1.9324,HMEC@7.00772,HSMM@2.53789,HUVEC@0.263955,K562@5.10246,MCF7@8.93229,NHEK@8.7861,NHLF@3.53044,SKNSHRA@2.14461, 7 6 4 6 ENSG00000235398.1 ENST00000422036.1 chr1:144276398-144311493 5 846 34241 intergenic 15.34 0 0,1,0 0 0,0,0 0 0 0 99.7210401891253 1.34455769399258 0 264.573286052009 3.07234017698081 0 0 0 cat,chimp,dog,horse,human,macaque,marmoset,orangutan,panda,rabbit, lincRNA processed_transcript A549@2.71843,AG04450@7.1729,BJ@1.28236,GM12878@19.4352,H1HESC@9.85727,HELAS3@3.08705,HEPG2@1.9324,HMEC@7.00772,HSMM@2.53789,HUVEC@0.263955,K562@5.10246,MCF7@8.93229,NHEK@8.7861,NHLF@3.53044,SKNSHRA@2.14461, 41 3 23 3 ENSG00000235398.1 ENST00000446174.1 chr1:144276398-144311564 4 656 34504 intergenic 11.82 0 0,1,0 0 0,0,0 0 0 0 104.236280487805 1.79758868536981 0 309.461890243902 3.65943079063297 0 0 0 cat,chimp,cow,dog,elephant,human,macaque,orangutan,panda,pig,rabbit, lincRNA processed_transcript A549@2.71843,AG04450@7.1729,BJ@1.28236,GM12878@19.4352,H1HESC@9.85727,HELAS3@3.08705,HEPG2@1.9324,HMEC@7.00772,HSMM@2.53789,HUVEC@0.263955,K562@5.10246,MCF7@8.93229,NHEK@8.7861,NHLF@3.53044,SKNSHRA@2.14461, 0 0 0 0 ENSG00000235398.1 ENST00000411795.1 chr1:144276402-144340736 8 1532 62788 intronic 9.38 0 0,0,0 0 0,0,0 0 0 0 133.582245430809 9.93568834809199 348.05 212.289817232376 12.6226986048289 354.656 0 0 chimp,cow,human,macaque,marmoset,orangutan, lincRNA processed_transcript A549@2.71843,AG04450@7.1729,BJ@1.28236,GM12878@19.4352,H1HESC@9.85727,HELAS3@3.08705,HEPG2@1.9324,HMEC@7.00772,HSMM@2.53789,HUVEC@0.263955,K562@5.10246,MCF7@8.93229,NHEK@8.7861,NHLF@3.53044,SKNSHRA@2.14461, 1 96 20 3 ENSG00000235398.1 ENST00000429241.1 chr1:144277291-144311564 7 886 33375 intergenic 15.34 0 0,1,0 0 0,0,0 0 0 0 95.2189616252822 1.37944569288389 0 226.17381489842 2.91925093632959 0 0 0 chimp,elephant,horse,human,macaque,marmoset,mouse,orangutan,rabbit, lincRNA processed_transcript A549@2.71843,AG04450@7.1729,BJ@1.28236,GM12878@19.4352,H1HESC@9.85727,HELAS3@3.08705,HEPG2@1.9324,HMEC@7.00772,HSMM@2.53789,HUVEC@0.263955,K562@5.10246,MCF7@8.93229,NHEK@8.7861,NHLF@3.53044,SKNSHRA@2.14461, 20 4 13 4 ENSG00000235398.1 ENST00000449092.1 chr1:144280383-144281169 3 487 295 intergenic -3.72 0 0,0,0 0 0,0,0 0 0 0 14.4887063655031 0 0 17.564681724846 0 0 0 0 chimp,cow,dog,horse,human,macaque,marmoset,orangutan,panda,rabbit, lincRNA processed_transcript A549@2.71843,AG04450@7.1729,BJ@1.28236,GM12878@19.4352,H1HESC@9.85727,HELAS3@3.08705,HEPG2@1.9324,HMEC@7.00772,HSMM@2.53789,HUVEC@0.263955,K562@5.10246,MCF7@8.93229,NHEK@8.7861,NHLF@3.53044,SKNSHRA@2.14461, 27 4 18 4 ENSG00000235398.1 ENST00000452480.1 chr1:144281154-144290308 3 371 8779 intergenic 0 0 0,0,0 0 0,0,0 0 0 0 152.967654986523 3.99897482629001 0 397.156334231806 9.87094202073129 0 0 0 cat,chimp,cow,dog,elephant,horse,human,macaque,marmoset,mouse,opossum,orangutan,panda,rabbit, lincRNA processed_transcript A549@2.71843,AG04450@7.1729,BJ@1.28236,GM12878@19.4352,H1HESC@9.85727,HELAS3@3.08705,HEPG2@1.9324,HMEC@7.00772,HSMM@2.53789,HUVEC@0.263955,K562@5.10246,MCF7@8.93229,NHEK@8.7861,NHLF@3.53044,SKNSHRA@2.14461, 0 0 0 0 ENSG00000235398.1 ENST00000436211.1 chr1:144281157-144289980 3 451 8368 intergenic 9.38 0 0,0,0 0 0,0,0 0 0 0 155.108647450111 2.58532504780115 0 359.563192904656 8.5475621414914 0 0 0 chimp,cow,dog,elephant,guinea_pig,horse,human,macaque,marmoset,orangutan,panda,rabbit,rat, lincRNA processed_transcript A549@2.71843,AG04450@7.1729,BJ@1.28236,GM12878@19.4352,H1HESC@9.85727,HELAS3@3.08705,HEPG2@1.9324,HMEC@7.00772,HSMM@2.53789,HUVEC@0.263955,K562@5.10246,MCF7@8.93229,NHEK@8.7861,NHLF@3.53044,SKNSHRA@2.14461, 0 0 8 5 ENSG00000235398.1 ENST00000418974.1 chr1:144284105-144311653 3 766 26778 intergenic 1.27 0 0,0,0 0 0,0,0 0 0 0 74.0874673629243 1.31103891254014 0 192.356396866841 3.23612667114796 0 0 0 cat,chimp,cow,elephant,guinea_pig,horse,human,macaque,marmoset,orangutan, lincRNA processed_transcript A549@2.71843,AG04450@7.1729,BJ@1.28236,GM12878@19.4352,H1HESC@9.85727,HELAS3@3.08705,HEPG2@1.9324,HMEC@7.00772,HSMM@2.53789,HUVEC@0.263955,K562@5.10246,MCF7@8.93229,NHEK@8.7861,NHLF@3.53044,SKNSHRA@2.14461, 0 0 0 0 ENSG00000235398.1 ENST00000417976.1 chr1:144299758-144301536 2 1052 724 intergenic 0.25 0 0,0,0 0 0,0,0 0 0 0 0 0 0 0 0 0 0 0 chimp,human,macaque,marmoset,orangutan, lincRNA processed_transcript A549@2.71843,AG04450@7.1729,BJ@1.28236,GM12878@19.4352,H1HESC@9.85727,HELAS3@3.08705,HEPG2@1.9324,HMEC@7.00772,HSMM@2.53789,HUVEC@0.263955,K562@5.10246,MCF7@8.93229,NHEK@8.7861,NHLF@3.53044,SKNSHRA@2.14461, 39 3 0 0 ENSG00000235398.1 ENST00000441423.1 chr1:144300512-144340671 3 734 39421 intronic 7.96 1 0,0,0 0 0,0,0 0 0 0 122.282016348774 14.4171380736156 388.285 127.220708446866 16.6155095000127 396.516 0 0 chimp,human,macaque,marmoset,mouse,orangutan,pig, lincRNA processed_transcript A549@2.71843,AG04450@7.1729,BJ@1.28236,GM12878@19.4352,H1HESC@9.85727,HELAS3@3.08705,HEPG2@1.9324,HMEC@7.00772,HSMM@2.53789,HUVEC@0.263955,K562@5.10246,MCF7@8.93229,NHEK@8.7861,NHLF@3.53044,SKNSHRA@2.14461, 4 8 1 8 ENSG00000235398.1 ENST00000439332.1 chr1:144300515-144340736 2 1231 38988 intronic 7.96 1 0,0,0 0 0,0,0 0 0 0 105.597075548335 14.5772545398584 348.05 109.861900893582 16.8000410382682 354.656 0 0 chimp,human,macaque,marmoset,orangutan, lincRNA processed_transcript A549@2.71843,AG04450@7.1729,BJ@1.28236,GM12878@19.4352,H1HESC@9.85727,HELAS3@3.08705,HEPG2@1.9324,HMEC@7.00772,HSMM@2.53789,HUVEC@0.263955,K562@5.10246,MCF7@8.93229,NHEK@8.7861,NHLF@3.53044,SKNSHRA@2.14461, 0 0 0 0 ENSG00000235398.1 ENST00000457645.1 chr1:144300517-144301385 2 552 314 intergenic 0.25 1 0,0,0 0 0,0,0 0 0 0 0 0 0 0 0 0 0 0 chimp,cow,human,macaque,marmoset,orangutan, lincRNA processed_transcript A549@2.71843,AG04450@7.1729,BJ@1.28236,GM12878@19.4352,H1HESC@9.85727,HELAS3@3.08705,HEPG2@1.9324,HMEC@7.00772,HSMM@2.53789,HUVEC@0.263955,K562@5.10246,MCF7@8.93229,NHEK@8.7861,NHLF@3.53044,SKNSHRA@2.14461, 0 0 0 0 ENSG00000235398.1 ENST00000414119.1 chr1:144301325-144341057 3 514 39214 intronic 7.96 0 0,0,0 0 0,0,0 0 0 0 362.492217898833 17.9428520426378 155.22 371.618677042802 20.2753098383231 157.56 0 0 chimp,human,macaque,orangutan,pig,rat, lincRNA processed_transcript A549@2.71843,AG04450@7.1729,BJ@1.28236,GM12878@19.4352,H1HESC@9.85727,HELAS3@3.08705,HEPG2@1.9324,HMEC@7.00772,HSMM@2.53789,HUVEC@0.263955,K562@5.10246,MCF7@8.93229,NHEK@8.7861,NHLF@3.53044,SKNSHRA@2.14461, 14 5 9 5 ENSG00000235398.1 ENST00000422629.1 chr1:144301397-144341756 3 312 40043 intronic 2.61 0 0,0,0 0 0,0,0 0 0 0 192.445512820513 24.6318957121095 0 200.217948717949 27.0316409859401 0 0 0 chimp,cow,dog,elephant,human,macaque,marmoset,mouse,orangutan, lincRNA processed_transcript A549@2.71843,AG04450@7.1729,BJ@1.28236,GM12878@19.4352,H1HESC@9.85727,HELAS3@3.08705,HEPG2@1.9324,HMEC@7.00772,HSMM@2.53789,HUVEC@0.263955,K562@5.10246,MCF7@8.93229,NHEK@8.7861,NHLF@3.53044,SKNSHRA@2.14461, 0 0 0 0 ENSG00000235398.1 ENST00000433598.1 chr1:144325552-144340593 4 401 14634 intronic 1.78 0 0,0,0 0 0,0,0 0 0 0 174.795511221945 27.737119037857 436.567 183.955112219451 33.4004373377067 446.748 0 0 cat,chimp,cow,dog,elephant,horse,human,macaque,marmoset,orangutan,pig, lincRNA processed_transcript A549@2.71843,AG04450@7.1729,BJ@1.28236,GM12878@19.4352,H1HESC@9.85727,HELAS3@3.08705,HEPG2@1.9324,HMEC@7.00772,HSMM@2.53789,HUVEC@0.263955,K562@5.10246,MCF7@8.93229,NHEK@8.7861,NHLF@3.53044,SKNSHRA@2.14461, 0 0 0 0 ENSG00000235398.1 ENST00000412194.1 chr1:144325839-144336254 2 371 10042 intergenic 1.78 0 0,0,0 0 0,0,0 0 0 0 0 14.6890061740689 3.585 0 20.1659032065326 3.765 0 0 chimp,dog,elephant,human,macaque,marmoset,orangutan,pig, lincRNA processed_transcript A549@2.71843,AG04450@7.1729,BJ@1.28236,GM12878@19.4352,H1HESC@9.85727,HELAS3@3.08705,HEPG2@1.9324,HMEC@7.00772,HSMM@2.53789,HUVEC@0.263955,K562@5.10246,MCF7@8.93229,NHEK@8.7861,NHLF@3.53044,SKNSHRA@2.14461, 0 0 0 0 ENSG00000235398.1 ENST00000440719.1 chr1:144326026-144340754 2 387 14339 intronic 1.78 0 0,0,0 0 0,0,0 0 0 0 364.682170542636 30.377641397587 336.908 379.410852713178 36.301973638329 343.064 0 0 chimp,cow,horse,human,mouse,opossum,orangutan,pig, lincRNA processed_transcript A549@2.71843,AG04450@7.1729,BJ@1.28236,GM12878@19.4352,H1HESC@9.85727,HELAS3@3.08705,HEPG2@1.9324,HMEC@7.00772,HSMM@2.53789,HUVEC@0.263955,K562@5.10246,MCF7@8.93229,NHEK@8.7861,NHLF@3.53044,SKNSHRA@2.14461, 0 0 0 0 ENSG00000236943.1 ENST00000430014.1 chr1:144456138-144521291 7 2066 63075 exonic 15.34 0 0,1,0 0 0,0,0 0 0 0 178.503388189739 9.51050336900516 121.242 271.909486931268 12.9950217994451 142.378 0 0 chimp,human,macaque,orangutan, antisense antisense A549@2.57588,AG04450@8.70833,BJ@2.83045,GM12878@19.0121,H1HESC@8.46365,HELAS3@3.83151,HEPG2@3.19407,HMEC@5.21265,HSMM@2.30222,HUVEC@0.278284,K562@4.72805,MCF7@7.98453,NHEK@8.11594,NHLF@2.57979,SKNSHRA@3.52215, 7 6 4 6 ENSG00000236943.1 ENST00000443242.1 chr1:144456641-144491721 5 845 34227 intronic 15.34 0 0,0,0 0 0,0,0 0 0 0 59.9266272189349 1.19803079440208 0 264.583431952663 5.04592865281795 0 0 0 cat,chimp,dog,horse,human,macaque,marmoset,orangutan,panda,rabbit, antisense antisense A549@2.57588,AG04450@8.70833,BJ@2.83045,GM12878@19.0121,H1HESC@8.46365,HELAS3@3.83151,HEPG2@3.19407,HMEC@5.21265,HSMM@2.30222,HUVEC@0.278284,K562@4.72805,MCF7@7.98453,NHEK@8.11594,NHLF@2.57979,SKNSHRA@3.52215, 41 3 23 3 ENSG00000236943.1 ENST00000454100.1 chr1:144456641-144491793 4 656 34490 intronic 11.82 0 0,0,0 0 0,0,0 0 0 0 60.8658536585366 1.49942012177443 0 308.625 5.61965787184691 0 0 0 cat,chimp,cow,dog,elephant,human,macaque,orangutan,panda,pig,rabbit, antisense antisense A549@2.57588,AG04450@8.70833,BJ@2.83045,GM12878@19.0121,H1HESC@8.46365,HELAS3@3.83151,HEPG2@3.19407,HMEC@5.21265,HSMM@2.30222,HUVEC@0.278284,K562@4.72805,MCF7@7.98453,NHEK@8.11594,NHLF@2.57979,SKNSHRA@3.52215, 0 0 0 0 ENSG00000236943.1 ENST00000437785.1 chr1:144456645-144520983 8 1531 62793 exonic 11.19 0 0,1,0 1 0,0,0 0 0 0 106.811234487263 9.90349242749988 304.803 210.836054866101 13.9120284108101 326.121 0 0 chimp,cow,human,macaque,marmoset,orangutan, antisense antisense A549@2.57588,AG04450@8.70833,BJ@2.83045,GM12878@19.0121,H1HESC@8.46365,HELAS3@3.83151,HEPG2@3.19407,HMEC@5.21265,HSMM@2.30222,HUVEC@0.278284,K562@4.72805,MCF7@7.98453,NHEK@8.11594,NHLF@2.57979,SKNSHRA@3.52215, 1 96 20 3 ENSG00000236943.1 ENST00000444499.1 chr1:144457533-144491793 7 887 33361 intronic 15.34 0 0,0,0 0 0,0,0 0 0 0 57.0890642615558 1.22912982224753 0 224.777903043968 4.93105722250532 0 0 0 chimp,dog,elephant,horse,human,macaque,marmoset,mouse,orangutan, antisense antisense A549@2.57588,AG04450@8.70833,BJ@2.83045,GM12878@19.0121,H1HESC@8.46365,HELAS3@3.83151,HEPG2@3.19407,HMEC@5.21265,HSMM@2.30222,HUVEC@0.278284,K562@4.72805,MCF7@7.98453,NHEK@8.11594,NHLF@2.57979,SKNSHRA@3.52215, 20 4 13 4 ENSG00000236943.1 ENST00000456620.1 chr1:144460626-144461412 3 487 295 intronic -3.72 0 0,0,0 0 0,0,0 0 0 0 9.42505133470226 0 0 12.4620123203285 0 0 0 0 chimp,cow,dog,horse,human,macaque,marmoset,orangutan,panda,rabbit, antisense antisense A549@2.57588,AG04450@8.70833,BJ@2.83045,GM12878@19.0121,H1HESC@8.46365,HELAS3@3.83151,HEPG2@3.19407,HMEC@5.21265,HSMM@2.30222,HUVEC@0.278284,K562@4.72805,MCF7@7.98453,NHEK@8.11594,NHLF@2.57979,SKNSHRA@3.52215, 27 4 18 4 ENSG00000236943.1 ENST00000421955.1 chr1:144461396-144470546 3 372 8774 intronic 0 0 0,0,0 0 0,0,0 0 0 0 77.8172043010753 1.81114656940962 0 394.193548387097 12.6189879188512 9.72 0 0 cat,chimp,cow,dog,elephant,horse,human,macaque,marmoset,mouse,opossum,orangutan,panda,rabbit, antisense antisense A549@2.57588,AG04450@8.70833,BJ@2.83045,GM12878@19.0121,H1HESC@8.46365,HELAS3@3.83151,HEPG2@3.19407,HMEC@5.21265,HSMM@2.30222,HUVEC@0.278284,K562@4.72805,MCF7@7.98453,NHEK@8.11594,NHLF@2.57979,SKNSHRA@3.52215, 0 0 0 0 ENSG00000236943.1 ENST00000428309.1 chr1:144461400-144470218 3 451 8363 intronic 11.19 0 0,0,0 0 0,0,0 0 0 0 70.5454545454545 1.52863804854717 0 357.569844789357 11.4559368647614 9.72 0 0 chimp,cow,dog,elephant,guinea_pig,horse,human,macaque,marmoset,orangutan,panda,rabbit,rat, antisense antisense A549@2.57588,AG04450@8.70833,BJ@2.83045,GM12878@19.0121,H1HESC@8.46365,HELAS3@3.83151,HEPG2@3.19407,HMEC@5.21265,HSMM@2.30222,HUVEC@0.278284,K562@4.72805,MCF7@7.98453,NHEK@8.11594,NHLF@2.57979,SKNSHRA@3.52215, 0 0 8 5 ENSG00000236943.1 ENST00000429496.1 chr1:144464347-144491882 3 766 26765 intronic 1.27 0 0,0,0 0 0,0,0 0 0 0 37.7911227154047 1.22379973846441 0 191.436031331593 5.21274051933495 0 0 0 cat,chimp,cow,elephant,guinea_pig,horse,human,macaque,marmoset,orangutan, antisense antisense A549@2.57588,AG04450@8.70833,BJ@2.83045,GM12878@19.0121,H1HESC@8.46365,HELAS3@3.83151,HEPG2@3.19407,HMEC@5.21265,HSMM@2.30222,HUVEC@0.278284,K562@4.72805,MCF7@7.98453,NHEK@8.11594,NHLF@2.57979,SKNSHRA@3.52215, 0 0 0 0 ENSG00000236943.1 ENST00000431928.1 chr1:144479978-144481765 2 1061 724 intronic 0.25 0 0,0,0 0 0,0,0 0 0 0 0 0 16.864 0 0 19.08 0 0 chimp,human,macaque,marmoset,orangutan, antisense antisense A549@2.57588,AG04450@8.70833,BJ@2.83045,GM12878@19.0121,H1HESC@8.46365,HELAS3@3.83151,HEPG2@3.19407,HMEC@5.21265,HSMM@2.30222,HUVEC@0.278284,K562@4.72805,MCF7@7.98453,NHEK@8.11594,NHLF@2.57979,SKNSHRA@3.52215, 39 3 0 0 ENSG00000236943.1 ENST00000411760.1 chr1:144480741-144520919 3 734 39440 exonic 7.96 0 0,1,0 1 0,0,0 0 0 0 122.08446866485 14.74761663286 344.355 127.220708446866 17.3899594320487 367.337 0 0 chimp,human,macaque,marmoset,mouse,orangutan,pig, antisense antisense A549@2.57588,AG04450@8.70833,BJ@2.83045,GM12878@19.0121,H1HESC@8.46365,HELAS3@3.83151,HEPG2@3.19407,HMEC@5.21265,HSMM@2.30222,HUVEC@0.278284,K562@4.72805,MCF7@7.98453,NHEK@8.11594,NHLF@2.57979,SKNSHRA@3.52215, 4 8 1 8 ENSG00000236943.1 ENST00000442509.1 chr1:144480744-144520993 2 1240 39007 exonic 7.96 1 0,1,0 1 0,0,0 0 0 0 109.146774193548 14.9113236085831 298.623 113.738709677419 17.5829979234496 319.681 0 0 chimp,human,macaque,marmoset,orangutan, antisense antisense A549@2.57588,AG04450@8.70833,BJ@2.83045,GM12878@19.0121,H1HESC@8.46365,HELAS3@3.83151,HEPG2@3.19407,HMEC@5.21265,HSMM@2.30222,HUVEC@0.278284,K562@4.72805,MCF7@7.98453,NHEK@8.11594,NHLF@2.57979,SKNSHRA@3.52215, 0 0 0 0 ENSG00000236943.1 ENST00000434159.1 chr1:144480753-144481509 2 440 314 intronic 0.25 1 0,0,0 0 0,0,0 0 0 0 0 0 16.864 0 0 19.08 0 0 chimp,human,macaque,marmoset,orangutan, antisense antisense A549@2.57588,AG04450@8.70833,BJ@2.83045,GM12878@19.0121,H1HESC@8.46365,HELAS3@3.83151,HEPG2@3.19407,HMEC@5.21265,HSMM@2.30222,HUVEC@0.278284,K562@4.72805,MCF7@7.98453,NHEK@8.11594,NHLF@2.57979,SKNSHRA@3.52215, 0 0 0 0 ENSG00000236943.1 ENST00000414344.1 chr1:144481555-144521271 3 512 39200 exonic 7.96 0 0,1,1 0 0,0,0 0 0 0 360.919921875 17.759693877551 133.422 365.044921875 20.5087244897959 154.518 0 0 chimp,cow,human,macaque,marmoset,opossum,orangutan, antisense antisense A549@2.57588,AG04450@8.70833,BJ@2.83045,GM12878@19.0121,H1HESC@8.46365,HELAS3@3.83151,HEPG2@3.19407,HMEC@5.21265,HSMM@2.30222,HUVEC@0.278284,K562@4.72805,MCF7@7.98453,NHEK@8.11594,NHLF@2.57979,SKNSHRA@3.52215, 0 0 0 0 ENSG00000236943.1 ENST00000426786.1 chr1:144481627-144521970 3 321 40018 exonic 7.96 0 0,0,0 0 0,0,0 0 0 0 186.747663551402 23.8808786046279 0 194.604361370717 27.0905342595832 0 0 0 chimp,cow,dog,elephant,human,macaque,marmoset,mouse,orangutan, antisense antisense A549@2.57588,AG04450@8.70833,BJ@2.83045,GM12878@19.0121,H1HESC@8.46365,HELAS3@3.83151,HEPG2@3.19407,HMEC@5.21265,HSMM@2.30222,HUVEC@0.278284,K562@4.72805,MCF7@7.98453,NHEK@8.11594,NHLF@2.57979,SKNSHRA@3.52215, 0 0 0 0 ENSG00000236943.1 ENST00000435404.1 chr1:144505804-144520841 4 401 14630 exonic 1.78 0 0,1,0 1 0,0,0 0 0 0 174.628428927681 27.5198906356801 392.559 183.955112219451 32.8561859193438 417.569 0 0 cat,chimp,cow,dog,elephant,horse,human,macaque,marmoset,orangutan,pig, antisense antisense A549@2.57588,AG04450@8.70833,BJ@2.83045,GM12878@19.0121,H1HESC@8.46365,HELAS3@3.83151,HEPG2@3.19407,HMEC@5.21265,HSMM@2.30222,HUVEC@0.278284,K562@4.72805,MCF7@7.98453,NHEK@8.11594,NHLF@2.57979,SKNSHRA@3.52215, 0 0 0 0 ENSG00000236943.1 ENST00000444883.1 chr1:144506091-144516503 2 370 10040 intronic 1.78 0 0,0,1 0 0,0,0 0 0 0 0 13.9256972111554 3.585 0 17.8875498007968 3.765 0 0 chimp,dog,elephant,human,macaque,marmoset,orangutan,panda,pig, antisense antisense A549@2.57588,AG04450@8.70833,BJ@2.83045,GM12878@19.0121,H1HESC@8.46365,HELAS3@3.83151,HEPG2@3.19407,HMEC@5.21265,HSMM@2.30222,HUVEC@0.278284,K562@4.72805,MCF7@7.98453,NHEK@8.11594,NHLF@2.57979,SKNSHRA@3.52215, 0 0 0 0 ENSG00000236943.1 ENST00000411941.1 chr1:144506277-144521002 2 387 14336 exonic 1.78 0 0,1,0 1 0,0,0 0 0 0 364.093023255814 30.1545758928571 293.061 379.410852713178 35.7448381696429 313.885 0 0 chimp,cow,dog,horse,human,mouse,opossum,orangutan,panda, antisense antisense A549@2.57588,AG04450@8.70833,BJ@2.83045,GM12878@19.0121,H1HESC@8.46365,HELAS3@3.83151,HEPG2@3.19407,HMEC@5.21265,HSMM@2.30222,HUVEC@0.278284,K562@4.72805,MCF7@7.98453,NHEK@8.11594,NHLF@2.57979,SKNSHRA@3.52215, 0 0 0 0 ENSG00000236943.1 ENST00000458262.1 chr1:144516419-144520983 2 519 4043 exonic 5.14 0 0,1,0 1 0,0,0 0 0 0 248.867052023121 72.3428147415286 304.803 259.337186897881 82.3267375711106 326.121 0 0 chimp,dog,horse,human,macaque,marmoset,mouse,orangutan,panda, antisense antisense A549@2.57588,AG04450@8.70833,BJ@2.83045,GM12878@19.0121,H1HESC@8.46365,HELAS3@3.83151,HEPG2@3.19407,HMEC@5.21265,HSMM@2.30222,HUVEC@0.278284,K562@4.72805,MCF7@7.98453,NHEK@8.11594,NHLF@2.57979,SKNSHRA@3.52215, 14 5 9 5 ENSG00000225241.2 ENST00000429694.1 chr1:144593363-144621656 11 2277 25996 intergenic 8.81 0 0,0,0 0 0,0,1 0 0 0 0 0.500269272195722 0 0 7.73584397599631 0 0 0 chimp,human,macaque,orangutan, lincRNA lincRNA A549@16.044,AG04450@21.6228,BJ@22.6743,GM12878@17.4866,H1HESC@2.83601,HELAS3@30.9584,HEPG2@19.7511,HMEC@17.0889,HSMM@12.003,HUVEC@23.1458,K562@12.0763,MCF7@26.0729,NHEK@17.855,NHLF@23.6667,SKNSHRA@22.1018, 83 2 47 2 ENSG00000225241.2 ENST00000421407.1 chr1:144593678-144621656 12 2116 25840 intergenic 5.11 0 0,1,0 1 0,0,1 0 0 0 0 0.503289473684211 0 0 7.78254643962848 0 0 0 chimp,human,macaque,orangutan, lincRNA lincRNA A549@16.044,AG04450@21.6228,BJ@22.6743,GM12878@17.4866,H1HESC@2.83601,HELAS3@30.9584,HEPG2@19.7511,HMEC@17.0889,HSMM@12.003,HUVEC@23.1458,K562@12.0763,MCF7@26.0729,NHEK@17.855,NHLF@23.6667,SKNSHRA@22.1018, 0 0 0 0 ENSG00000225241.2 ENST00000447534.1 chr1:144593720-144605701 4 2640 9335 intergenic 2.57 0 0,1,1 1 0,0,0 0 0 0 0 0 0 0 2.04349223352973 0 0 0 chimp,human,macaque,marmoset,orangutan, lincRNA lincRNA A549@16.044,AG04450@21.6228,BJ@22.6743,GM12878@17.4866,H1HESC@2.83601,HELAS3@30.9584,HEPG2@19.7511,HMEC@17.0889,HSMM@12.003,HUVEC@23.1458,K562@12.0763,MCF7@26.0729,NHEK@17.855,NHLF@23.6667,SKNSHRA@22.1018, 0 0 0 0 ENSG00000225241.2 ENST00000439352.1 chr1:144593736-144597070 3 1113 2217 intergenic 3.49 0 0,1,0 1 0,0,0 0 0 0 0 0 0 0 0 0 0 0 chimp,human,macaque,marmoset,orangutan, lincRNA lincRNA A549@16.044,AG04450@21.6228,BJ@22.6743,GM12878@17.4866,H1HESC@2.83601,HELAS3@30.9584,HEPG2@19.7511,HMEC@17.0889,HSMM@12.003,HUVEC@23.1458,K562@12.0763,MCF7@26.0729,NHEK@17.855,NHLF@23.6667,SKNSHRA@22.1018, 0 0 0 0 ENSG00000225241.2 ENST00000428365.1 chr1:144593808-144603193 5 698 8679 intergenic 6.48 0 0,1,0 1 0,0,0 0 0 0 0 0 0 0 2.19794907247379 0 0 0 chimp,horse,human,macaque,marmoset,orangutan, lincRNA lincRNA A549@16.044,AG04450@21.6228,BJ@22.6743,GM12878@17.4866,H1HESC@2.83601,HELAS3@30.9584,HEPG2@19.7511,HMEC@17.0889,HSMM@12.003,HUVEC@23.1458,K562@12.0763,MCF7@26.0729,NHEK@17.855,NHLF@23.6667,SKNSHRA@22.1018, 0 0 0 0 ENSG00000225241.2 ENST00000449960.1 chr1:144593907-144620039 7 1048 25072 intergenic 5.28 0 0,0,0 1 0,0,1 0 0 0 0 0.518706126356094 0 0 8.0209396936822 0 0 0 chimp,horse,human,macaque,marmoset,orangutan, lincRNA lincRNA A549@16.044,AG04450@21.6228,BJ@22.6743,GM12878@17.4866,H1HESC@2.83601,HELAS3@30.9584,HEPG2@19.7511,HMEC@17.0889,HSMM@12.003,HUVEC@23.1458,K562@12.0763,MCF7@26.0729,NHEK@17.855,NHLF@23.6667,SKNSHRA@22.1018, 0 0 0 0 ENSG00000225241.2 ENST00000419820.1 chr1:144594045-144605891 4 3052 8788 intergenic 2.57 0 0,0,0 0 0,0,0 0 0 0 0 0 0 0 2.17068730086482 0 0 0 chimp,human,macaque,marmoset,orangutan, lincRNA lincRNA A549@16.044,AG04450@21.6228,BJ@22.6743,GM12878@17.4866,H1HESC@2.83601,HELAS3@30.9584,HEPG2@19.7511,HMEC@17.0889,HSMM@12.003,HUVEC@23.1458,K562@12.0763,MCF7@26.0729,NHEK@17.855,NHLF@23.6667,SKNSHRA@22.1018, 62 2 0 0 ENSG00000225241.2 ENST00000423405.1 chr1:144598512-144620094 11 1827 19735 intergenic 9.35 0 0,0,0 0 0,0,1 0 0 0 3.76847290640394 0.297187737522169 0 61.0946907498632 4.50853813022549 0 0 0 chimp,human,macaque,orangutan, lincRNA lincRNA A549@16.044,AG04450@21.6228,BJ@22.6743,GM12878@17.4866,H1HESC@2.83601,HELAS3@30.9584,HEPG2@19.7511,HMEC@17.0889,HSMM@12.003,HUVEC@23.1458,K562@12.0763,MCF7@26.0729,NHEK@17.855,NHLF@23.6667,SKNSHRA@22.1018, 0 0 0 0 ENSG00000225241.2 ENST00000448227.1 chr1:144598614-144606278 3 413 7247 intergenic 0 0 0,0,0 0 0,0,0 0 0 0 0 0 0 0 2.63226162550021 0 0 0 chimp,horse,human,macaque,marmoset,orangutan, lincRNA lincRNA A549@16.044,AG04450@21.6228,BJ@22.6743,GM12878@17.4866,H1HESC@2.83601,HELAS3@30.9584,HEPG2@19.7511,HMEC@17.0889,HSMM@12.003,HUVEC@23.1458,K562@12.0763,MCF7@26.0729,NHEK@17.855,NHLF@23.6667,SKNSHRA@22.1018, 0 0 0 0 ENSG00000225241.2 ENST00000437451.1 chr1:144598651-144607547 3 722 8170 intergenic 1.09 0 0,0,1 0 0,0,0 0 0 0 0 0 0 0 2.33488372093023 0 0 0 cat,chimp,dog,guinea_pig,horse,human,macaque,marmoset,orangutan,pig, lincRNA lincRNA A549@16.044,AG04450@21.6228,BJ@22.6743,GM12878@17.4866,H1HESC@2.83601,HELAS3@30.9584,HEPG2@19.7511,HMEC@17.0889,HSMM@12.003,HUVEC@23.1458,K562@12.0763,MCF7@26.0729,NHEK@17.855,NHLF@23.6667,SKNSHRA@22.1018, 0 0 0 0 ENSG00000225241.2 ENST00000437133.1 chr1:144598655-144620094 9 1255 20168 intergenic 5.11 0 0,0,0 0 0,0,1 0 0 0 0 0.644833399444665 0 0 9.97129115430385 0 0 0 chimp,human,macaque,marmoset,orangutan, lincRNA lincRNA A549@16.044,AG04450@21.6228,BJ@22.6743,GM12878@17.4866,H1HESC@2.83601,HELAS3@30.9584,HEPG2@19.7511,HMEC@17.0889,HSMM@12.003,HUVEC@23.1458,K562@12.0763,MCF7@26.0729,NHEK@17.855,NHLF@23.6667,SKNSHRA@22.1018, 0 0 0 0 ENSG00000225241.2 ENST00000446541.1 chr1:144604417-144621656 9 1421 15802 intergenic -1.73 0 0,0,0 0 0,0,1 0 0 0 0 0.822997088976079 0 0 11.5191115048728 0 0 0 chimp,human,macaque,orangutan, lincRNA lincRNA A549@16.044,AG04450@21.6228,BJ@22.6743,GM12878@17.4866,H1HESC@2.83601,HELAS3@30.9584,HEPG2@19.7511,HMEC@17.0889,HSMM@12.003,HUVEC@23.1458,K562@12.0763,MCF7@26.0729,NHEK@17.855,NHLF@23.6667,SKNSHRA@22.1018, 0 0 0 0 ENSG00000225241.2 ENST00000428366.1 chr1:144614388-144621656 6 1523 5735 intergenic -0.56 0 0,0,0 0 0,0,1 0 0 0 0 0 0 0 0 0 0 0 chimp,horse,human,macaque,marmoset,orangutan, lincRNA lincRNA A549@16.044,AG04450@21.6228,BJ@22.6743,GM12878@17.4866,H1HESC@2.83601,HELAS3@30.9584,HEPG2@19.7511,HMEC@17.0889,HSMM@12.003,HUVEC@23.1458,K562@12.0763,MCF7@26.0729,NHEK@17.855,NHLF@23.6667,SKNSHRA@22.1018, 0 0 0 0 ENSG00000225241.2 ENST00000448172.1 chr1:144614532-144619419 6 1206 3671 intergenic 5.11 0 0,0,0 0 0,0,1 0 0 0 0 0 0 0 0 0 0 0 chimp,horse,human,macaque,marmoset,orangutan, lincRNA lincRNA A549@16.044,AG04450@21.6228,BJ@22.6743,GM12878@17.4866,H1HESC@2.83601,HELAS3@30.9584,HEPG2@19.7511,HMEC@17.0889,HSMM@12.003,HUVEC@23.1458,K562@12.0763,MCF7@26.0729,NHEK@17.855,NHLF@23.6667,SKNSHRA@22.1018, 0 0 0 0 ENSG00000225241.2 ENST00000334866.9 chr1:144615131-144621655 5 877 5639 intergenic -1.73 0 0,0,0 0 0,0,1 0 0 0 0 0 0 0 0 0 1 1 chimp,human,macaque,marmoset,orangutan, lincRNA lincRNA A549@16.044,AG04450@21.6228,BJ@22.6743,GM12878@17.4866,H1HESC@2.83601,HELAS3@30.9584,HEPG2@19.7511,HMEC@17.0889,HSMM@12.003,HUVEC@23.1458,K562@12.0763,MCF7@26.0729,NHEK@17.855,NHLF@23.6667,SKNSHRA@22.1018, 0 0 0 0 ENSG00000225241.2 ENST00000427261.1 chr1:144618160-144621548 3 448 2936 intergenic -1.15 0 0,0,0 0 0,0,1 0 0 0 0 0 0 0 0 0 0 0 cat,chimp,cow,horse,human,macaque,marmoset,orangutan, lincRNA lincRNA A549@16.044,AG04450@21.6228,BJ@22.6743,GM12878@17.4866,H1HESC@2.83601,HELAS3@30.9584,HEPG2@19.7511,HMEC@17.0889,HSMM@12.003,HUVEC@23.1458,K562@12.0763,MCF7@26.0729,NHEK@17.855,NHLF@23.6667,SKNSHRA@22.1018, 0 0 0 0 ENSG00000254539.1 ENST00000466343.2 chr1:144833168-144835867 2 867 1830 intergenic -9.65 1 0,0,0 0 0,0,0 0 0 0 0 2.48142076502732 0 0 2.52295081967213 0 0 1 chimp,human,macaque,orangutan, antisense antisense A549@1.68105,AG04450@6.57583,BJ@8.10867,GM12878@1.08779,H1HESC@5.84527,HELAS3@1.2458,HEPG2@1.63054,HMEC@1.4277,HSMM@9.10909,HUVEC@2.89182,K562@10.2768,MCF7@1.89602,NHEK@4.8141,NHLF@4.76177,SKNSHRA@10.6265, 0 0 0 0 ENSG00000255148.1 ENST00000532137.1 chr1:144858174-144865800 3 551 7071 intronic 3.34 0 0,1,0 0 0,0,0 0.867513611615245 9.90878235044548 0 0 22.1929005798331 14.706 0 21.5900155564984 20.492 0 0 cat,chimp,elephant,human,macaque,marmoset,orangutan,panda,pig,rabbit, antisense antisense A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000255148.1 ENST00000524505.1 chr1:144858211-144865740 2 571 6956 intronic 3.34 0 0,1,0 0 0,0,0 0 10.0725991949396 0 0 22.5598044853364 14.706 0 21.9469522714204 20.492 0 0 cat,chimp,dog,elephant,horse,human,macaque,marmoset,orangutan,panda,pig,rabbit, antisense antisense A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000254913.1 ENST00000531288.1 chr1:144874945-144878163 3 403 2811 exonic -0.41 0 0,0,0 0 0,0,0 34.0446650124069 28.4646033440057 147.966 48.87841191067 36.1181074350765 147.532 62.4416873449131 44.7203842049093 152.613 0 0 chimp,horse,human,macaque,marmoset,orangutan, antisense antisense A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000223380.3 ENST00000453618.1 chr1:145096220-145116922 5 2003 18691 intergenic 16.19 0 0,0,1 0 0,0,1 251.791812281578 7.70504520892408 0 329.444832750874 5.74918409929913 2.868 355.379930104843 7.11551013856936 3.012 0 0 cat,chimp,cow,dog,elephant,guinea_pig,horse,human,macaque,marmoset,orangutan,panda,pig,rabbit, lincRNA lincRNA A549@10.0269,AG04450@50.5712,BJ@39.4749,GM12878@19.176,H1HESC@5.57465,HELAS3@33.3661,HEPG2@13.1875,HMEC@9.48563,HSMM@30.7854,HUVEC@14.6827,K562@21.0563,MCF7@23.1675,NHEK@14.1313,NHLF@42.5752,SKNSHRA@21.2154, 0 0 0 0 ENSG00000223380.3 ENST00000500203.2 chr1:145096531-145100984 3 436 4013 intergenic 10.05 0 0,1,0 1 0,0,1 75.8577981651376 4.03563418888612 6.82 99.4747706422018 8.46822825816098 23.391 103.56880733945 11.0600548218291 26.293 0 0 chimp,guinea_pig,human,macaque,marmoset,orangutan, lincRNA lincRNA A549@10.0269,AG04450@50.5712,BJ@39.4749,GM12878@19.176,H1HESC@5.57465,HELAS3@33.3661,HEPG2@13.1875,HMEC@9.48563,HSMM@30.7854,HUVEC@14.6827,K562@21.0563,MCF7@23.1675,NHEK@14.1313,NHLF@42.5752,SKNSHRA@21.2154, 1 96 0 0 ENSG00000227280.1 ENST00000421937.1 chr1:145373054-145375554 2 664 1834 intergenic -9.42 1 0,0,0 0 0,0,0 0 0 0 0 0 0 0 0 0 0 0 chimp,human,macaque,orangutan, antisense antisense A549@2.95625,AG04450@3.27675,BJ@5.58542,GM12878@0.660784,H1HESC@5.66147,HELAS3@1.75246,HEPG2@2.82454,HMEC@1.04517,HSMM@4.82399,HUVEC@2.30712,K562@5.14039,MCF7@3.33661,NHEK@4.39374,NHLF@1.97946,SKNSHRA@11.0132, 0 0 0 0 ENSG00000233396.1 ENST00000433081.1 chr1:145376125-145382397 3 811 5457 intergenic 2.68 0 1,1,1 1 0,0,0 0 0 0 0 0 14.13 0 0 32.768 0 0 chimp,human,macaque,marmoset,orangutan, lincRNA lincRNA A549@1.43012,AG04450@0.37123,BJ@0.324974,GM12878@0.174383,H1HESC@1.52763,HELAS3@0.339908,HEPG2@0.56787,HMEC@0.139618,HSMM@0.40432,HUVEC@0.136279,K562@0.781076,MCF7@1.07898,NHEK@0.921608,NHLF@0.252175,SKNSHRA@3.24842, 0 0 0 0 ENSG00000233396.1 ENST00000452883.1 chr1:145376167-145377772 3 645 956 intergenic 3.13 0 0,0,1 0 0,0,0 0 0 0 0 0 0 0 0 0 0 0 chimp,human,macaque,marmoset,orangutan,panda, lincRNA lincRNA A549@1.43012,AG04450@0.37123,BJ@0.324974,GM12878@0.174383,H1HESC@1.52763,HELAS3@0.339908,HEPG2@0.56787,HMEC@0.139618,HSMM@0.40432,HUVEC@0.136279,K562@0.781076,MCF7@1.07898,NHEK@0.921608,NHLF@0.252175,SKNSHRA@3.24842, 0 0 0 0 ENSG00000233396.1 ENST00000419817.1 chr1:145376327-145382362 4 868 5161 intergenic 6.63 0 0,1,0 1 0,0,0 0 0 0 0 0 14.13 0 0 32.768 0 0 chimp,human,macaque,marmoset,orangutan, lincRNA lincRNA A549@1.43012,AG04450@0.37123,BJ@0.324974,GM12878@0.174383,H1HESC@1.52763,HELAS3@0.339908,HEPG2@0.56787,HMEC@0.139618,HSMM@0.40432,HUVEC@0.136279,K562@0.781076,MCF7@1.07898,NHEK@0.921608,NHLF@0.252175,SKNSHRA@3.24842, 22 4 0 0 ENSG00000233396.1 ENST00000457465.1 chr1:145377066-145378049 2 370 611 intergenic 3.13 0 0,0,0 0 0,0,0 0 0 0 0 0 0 0 0 0 0 0 chimp,human,macaque,marmoset,orangutan, lincRNA lincRNA A549@1.43012,AG04450@0.37123,BJ@0.324974,GM12878@0.174383,H1HESC@1.52763,HELAS3@0.339908,HEPG2@0.56787,HMEC@0.139618,HSMM@0.40432,HUVEC@0.136279,K562@0.781076,MCF7@1.07898,NHEK@0.921608,NHLF@0.252175,SKNSHRA@3.24842, 0 0 93 2 ENSG00000234222.1 ENST00000437207.1 chr1:145486272-145493959 3 219 7464 intronic 0 0 0,1,0 0 0,0,0 107.182648401826 28.5719453376206 11.233 46.351598173516 41.1239281886388 0 49.0913242009132 43.0715434083601 0 0 0 cat,chimp,cow,dog,guinea_pig,horse,human,macaque,orangutan,panda,pig, antisense antisense A549@0.0411715,AG04450@0.005945,BJ@0.006419,GM12878@0.020325,H1HESC@0,HELAS3@0.025359,HEPG2@0.0458785,HMEC@0.027211,HSMM@0,HUVEC@0,K562@0.0390155,MCF7@0.0241025,NHEK@0.017099,NHLF@0,SKNSHRA@0.0217355, 0 0 0 0 ENSG00000234222.1 ENST00000366105.2 chr1:145492839-145493891 2 375 675 intronic -26.97 1 0,0,1 0 0,0,0 0 0 17.925 0 5.66518518518519 0 0 8.44148148148148 0 0 0 chimp,human,macaque,marmoset,orangutan, antisense antisense A549@0.0411715,AG04450@0.005945,BJ@0.006419,GM12878@0.020325,H1HESC@0,HELAS3@0.025359,HEPG2@0.0458785,HMEC@0.027211,HSMM@0,HUVEC@0,K562@0.0390155,MCF7@0.0241025,NHEK@0.017099,NHLF@0,SKNSHRA@0.0217355, 1 96 0 0 ENSG00000234222.1 ENST00000421764.1 chr1:145493881-145507490 2 285 13322 intronic 0 1 1,1,1 1 0,0,0 36.059649122807 24.5757393784717 115.27 7.89824561403509 33.1941900615523 162.846 9.70175438596491 58.422233898814 165.105 0 0 chimp,human,macaque,orangutan, antisense antisense A549@0.0411715,AG04450@0.005945,BJ@0.006419,GM12878@0.020325,H1HESC@0,HELAS3@0.025359,HEPG2@0.0458785,HMEC@0.027211,HSMM@0,HUVEC@0,K562@0.0390155,MCF7@0.0241025,NHEK@0.017099,NHLF@0,SKNSHRA@0.0217355, 0 0 0 0 ENSG00000234222.1 ENST00000448561.1 chr1:145493881-145507611 3 344 13382 exonic -0.77 1 0,0,1 0 0,0,0 45.1598837209302 24.4655507397997 139.615 37.625 33.0453594380511 208.094 27.9505813953488 58.1602899417127 228.828 0 0 chimp,horse,human,macaque,marmoset,orangutan,pig,rabbit, antisense antisense A549@0.0411715,AG04450@0.005945,BJ@0.006419,GM12878@0.020325,H1HESC@0,HELAS3@0.025359,HEPG2@0.0458785,HMEC@0.027211,HSMM@0,HUVEC@0,K562@0.0390155,MCF7@0.0241025,NHEK@0.017099,NHLF@0,SKNSHRA@0.0217355, 0 0 0 0 ENSG00000234222.1 ENST00000437797.1 chr1:145493881-145507988 3 533 13570 exonic -0.77 1 0,1,1 0 0,0,0 86.108818011257 24.6901989683125 135.285 117.996247654784 33.7436256448047 187.214 129.574108818011 58.1450257921887 210.441 0 0 chimp,cow,dog,elephant,human,macaque,marmoset,orangutan,pig,rat, antisense antisense A549@0.0411715,AG04450@0.005945,BJ@0.006419,GM12878@0.020325,H1HESC@0,HELAS3@0.025359,HEPG2@0.0458785,HMEC@0.027211,HSMM@0,HUVEC@0,K562@0.0390155,MCF7@0.0241025,NHEK@0.017099,NHLF@0,SKNSHRA@0.0217355, 0 0 0 0 ENSG00000234222.1 ENST00000412239.1 chr1:145493884-145508218 3 567 13763 exonic -2.66 1 0,0,1 0 0,0,0 109.414462081129 25.6307491099324 157.217 142.701940035273 35.0374918259101 207.742 153.407407407407 59.2414444525176 230.936 0 0 cat,chimp,cow,dog,elephant,guinea_pig,horse,human,macaque,marmoset,orangutan,panda,pig,rat, antisense antisense A549@0.0411715,AG04450@0.005945,BJ@0.006419,GM12878@0.020325,H1HESC@0,HELAS3@0.025359,HEPG2@0.0458785,HMEC@0.027211,HSMM@0,HUVEC@0,K562@0.0390155,MCF7@0.0241025,NHEK@0.017099,NHLF@0,SKNSHRA@0.0217355, 0 0 0 0 ENSG00000234222.1 ENST00000447686.1 chr1:145507357-145508262 2 787 116 exonic -2.66 0 0,0,0 0 0,0,0 95.8386277001271 152.672413793103 156.821 150.609911054638 209.655172413793 185.938 150.642947903431 226.827586206897 211.467 0 0 cat,chimp,cow,dog,elephant,guinea_pig,horse,human,macaque,marmoset,orangutan,panda,pig,rat, antisense antisense A549@0.0411715,AG04450@0.005945,BJ@0.006419,GM12878@0.020325,H1HESC@0,HELAS3@0.025359,HEPG2@0.0458785,HMEC@0.027211,HSMM@0,HUVEC@0,K562@0.0390155,MCF7@0.0241025,NHEK@0.017099,NHLF@0,SKNSHRA@0.0217355, 0 0 0 0 ENSG00000235702.1 ENST00000437377.1 chr1:145827205-145833118 2 130 5781 intergenic -6.94 0 0,1,0 0 0,0,0 0 0 0 0 4.2912990832036 36.102 0 6.17540217955371 37.48 0 0 chimp,elephant,horse,human,macaque,orangutan, antisense antisense A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0.158766,HEPG2@0.0605325,HMEC@0,HSMM@0,HUVEC@0,K562@0.0186065,MCF7@0.015231,NHEK@0.039188,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000234245.2 ENST00000428782.2 chr1:145952372-145956451 3 489 3586 intergenic -0.23 1 0,0,1 0 0,0,0 0 0 0 0 0 0 0 0 0 0 0 chimp,horse,human,macaque,orangutan, lincRNA lincRNA A549@0.361805,AG04450@0.009342,BJ@0.0397755,GM12878@0.470224,H1HESC@0.425018,HELAS3@0.798612,HEPG2@1.28758,HMEC@0,HSMM@0.0436255,HUVEC@0.0836845,K562@1.33228,MCF7@0.442242,NHEK@0.161838,NHLF@0,SKNSHRA@0.109281, 0 0 0 0 ENSG00000249788.1 ENST00000512265.1 chr1:146086591-146088636 2 1660 383 intronic 4.78 0 0,0,0 0 0,0,0 0 0 0 0 0 0 0 0 0 0 1 chimp,human,macaque,orangutan, lincRNA lincRNA A549@0.003918,AG04450@0.0053435,BJ@0.017524,GM12878@0.463792,H1HESC@0.09293,HELAS3@0.066401,HEPG2@0.113737,HMEC@0,HSMM@0,HUVEC@0.129674,K562@20.6553,MCF7@0.007258,NHEK@0.00158867,NHLF@0,SKNSHRA@0.0041025, 84 2 48 2 ENSG00000227733.2 ENST00000488578.1 chr1:146093234-146130539 5 664 36633 intronic -4.52 0 0,0,0 0 0,0,0 0 1.83452078726831 0 0 44.2627958398166 0 0 49.5063194387574 0 0 0 chimp,human,macaque,marmoset,orangutan, sense_intronic sense_intronic A549@0.538158,AG04450@3.09399,BJ@3.07557,GM12878@0,H1HESC@8.21543,HELAS3@0.189334,HEPG2@0.467821,HMEC@0,HSMM@0.871053,HUVEC@0,K562@0,MCF7@0.019011,NHEK@0.0112237,NHLF@1.76109,SKNSHRA@0.0227065, 0 0 99 2 ENSG00000227733.2 ENST00000482381.1 chr1:146126404-146136197 3 549 9240 intronic -2.99 0 0,0,1 0 0,0,0 0 7.27316017316017 0 0 48.4215367965368 69.212 0 53.7906926406926 65.32 0 0 cat,chimp,human,macaque,marmoset,orangutan,pig, sense_intronic sense_intronic A549@0.538158,AG04450@3.09399,BJ@3.07557,GM12878@0,H1HESC@8.21543,HELAS3@0.189334,HEPG2@0.467821,HMEC@0,HSMM@0.871053,HUVEC@0,K562@0,MCF7@0.019011,NHEK@0.0112237,NHLF@1.76109,SKNSHRA@0.0227065, 0 0 0 0 ENSG00000227733.2 ENST00000438173.2 chr1:146126404-146159102 8 1042 31642 intronic -2.71 0 0,0,1 0 0,0,0 0 2.12388597433791 0 54.4740882917466 64.9182099740851 2.151 55.7399232245681 69.2310220592883 2.259 0 0 chimp,human,macaque,marmoset,orangutan, sense_intronic sense_intronic A549@0.538158,AG04450@3.09399,BJ@3.07557,GM12878@0,H1HESC@8.21543,HELAS3@0.189334,HEPG2@0.467821,HMEC@0,HSMM@0.871053,HUVEC@0,K562@0,MCF7@0.019011,NHEK@0.0112237,NHLF@1.76109,SKNSHRA@0.0227065, 124 2 0 0 ENSG00000227733.2 ENST00000496508.1 chr1:146138539-146149334 2 2511 8282 intronic -4.03 0 0,1,0 0 0,0,0 0 0 0 68.9151732377539 64.2119053368752 269.356 80.2903225806452 66.1195363438783 276.782 0 0 chimp,cow,guinea_pig,human,macaque,marmoset,orangutan, sense_intronic sense_intronic A549@0.538158,AG04450@3.09399,BJ@3.07557,GM12878@0,H1HESC@8.21543,HELAS3@0.189334,HEPG2@0.467821,HMEC@0,HSMM@0.871053,HUVEC@0,K562@0,MCF7@0.019011,NHEK@0.0112237,NHLF@1.76109,SKNSHRA@0.0227065, 0 0 0 0 ENSG00000227733.2 ENST00000464343.1 chr1:146138683-146157067 3 736 17644 intronic -5.26 0 0,0,0 0 0,0,0 0 0 0 69.3288043478261 82.5118453865337 2.7 70.7296195652174 85.9590795737928 2.78 0 0 chimp,elephant,human,macaque,marmoset,orangutan, sense_intronic sense_intronic A549@0.538158,AG04450@3.09399,BJ@3.07557,GM12878@0,H1HESC@8.21543,HELAS3@0.189334,HEPG2@0.467821,HMEC@0,HSMM@0.871053,HUVEC@0,K562@0,MCF7@0.019011,NHEK@0.0112237,NHLF@1.76109,SKNSHRA@0.0227065, 0 0 0 0 ENSG00000227733.2 ENST00000476063.1 chr1:146157081-146159102 3 365 1652 intronic -2.71 0 0,0,0 0 0,0,0 0 0 0 15.7150684931507 42.1271186440678 2.151 16.5041095890411 48.567191283293 2.259 0 0 chimp,cow,elephant,horse,human,macaque,marmoset,orangutan,pig,rabbit, sense_intronic sense_intronic A549@0.538158,AG04450@3.09399,BJ@3.07557,GM12878@0,H1HESC@8.21543,HELAS3@0.189334,HEPG2@0.467821,HMEC@0,HSMM@0.871053,HUVEC@0,K562@0,MCF7@0.019011,NHEK@0.0112237,NHLF@1.76109,SKNSHRA@0.0227065, 0 0 0 0 ENSG00000234225.1 ENST00000425109.1 chr1:146473499-146475178 3 724 951 intergenic 3.92 0 0,0,0 0 0,0,0 0 0 0 0 0 0 0 0 0 0 0 chimp,human,macaque,marmoset,orangutan,panda, lincRNA lincRNA A549@0.166377,AG04450@0.150241,BJ@0.103219,GM12878@0.038302,H1HESC@0.581196,HELAS3@0.053097,HEPG2@0.129632,HMEC@0.095748,HSMM@0.343113,HUVEC@0.0412115,K562@0.472599,MCF7@0.224559,NHEK@0.195476,NHLF@0.202694,SKNSHRA@1.49235, 22 4 0 0 ENSG00000234225.1 ENST00000455718.1 chr1:146473735-146474743 3 591 413 intergenic 1.22 0 0,0,0 0 0,0,0 0 0 0 0 0 0 0 0 0 0 0 chimp,human,macaque,marmoset,orangutan,panda, lincRNA lincRNA A549@0.166377,AG04450@0.150241,BJ@0.103219,GM12878@0.038302,H1HESC@0.581196,HELAS3@0.053097,HEPG2@0.129632,HMEC@0.095748,HSMM@0.343113,HUVEC@0.0412115,K562@0.472599,MCF7@0.224559,NHEK@0.195476,NHLF@0.202694,SKNSHRA@1.49235, 0 0 0 0 ENSG00000237188.1 ENST00000440377.1 chr1:146644806-146646726 2 1055 863 intergenic -1.05 0 0,1,1 0 0,0,0 16.242654028436 0 20.64 24.4947867298578 0 47.241 34.1298578199052 0 54.717 0 0 cat,chimp,horse,human,macaque,marmoset,orangutan,pig, lincRNA processed_transcript A549@1.12989,AG04450@1.6487,BJ@0.942154,GM12878@1.40602,H1HESC@0.479378,HELAS3@1.5457,HEPG2@1.96189,HMEC@0.313779,HSMM@0.767866,HUVEC@0.482258,K562@0.540301,MCF7@3.40977,NHEK@0.667176,NHLF@1.64977,SKNSHRA@2.52154, 0 0 0 0 ENSG00000234610.1 ENST00000437831.1 chr1:146986158-146989699 3 698 2839 intergenic -4.34 0 0,1,0 0 0,0,0 0 9.14899612539627 0 7.30659025787966 1.71222261359634 0 7.79369627507163 3.76224022543149 0 0 0 chimp,human,orangutan, lincRNA lincRNA A549@0.047907,AG04450@0.0063945,BJ@0,GM12878@0,H1HESC@0.33304,HELAS3@0.344308,HEPG2@0.352326,HMEC@0,HSMM@0.0065035,HUVEC@0,K562@0.915739,MCF7@0.011472,NHEK@0,NHLF@0.005567,SKNSHRA@0.100228, 9 6 0 0 ENSG00000227139.1 ENST00000431525.1 chr1:147169914-147171461 2 444 1101 intergenic -1.18 0 0,0,0 0 0,0,0 0 0 0 0 4.50499545867393 0 2.45045045045045 6.42325158946412 0 0 0 cat,chimp,dog,elephant,guinea_pig,horse,human,macaque,marmoset,orangutan,panda,pig, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000234482.1 ENST00000428911.1 chr1:147229426-147230517 2 508 581 exonic -4.68 0 0,1,1 0 0,0,0 19.0551181102362 113.901893287435 87.957 34.1082677165354 69.5731497418245 26.495 46.3484251968504 87.1600688468158 26.924 0 0 cat,chimp,cow,dog,elephant,guinea_pig,horse,human,macaque,marmoset,mouse,orangutan,panda,pig,rabbit,rat, antisense antisense A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0.0243463,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000234190.1 ENST00000426504.1 chr1:147249700-147261065 2 478 10885 intergenic 2.52 0 0,0,0 0 0,0,0 18.1882845188285 19.1556270096463 0 2.07531380753138 19.8067064768029 0 8.28661087866109 28.0853468075333 0 0 0 chimp,cow,elephant,horse,human,macaque,marmoset,orangutan,panda,pig,rabbit, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000215859.4 ENST00000401008.2 chr1:147466094-147484331 9 3489 14732 intergenic 28.43 0 0,1,0 0 0,0,0 68.4310690742333 2.93150963888135 0 134.085984522786 6.86939994569645 0 126.70535970192 8.77694814010318 0 0 0 human, processed_transcript processed_transcript A549@0.0890565,AG04450@0.075815,BJ@0.006098,GM12878@0.0701555,H1HESC@0.072356,HELAS3@0.029814,HEPG2@0.0959845,HMEC@0.047758,HSMM@0.0266655,HUVEC@0.0077135,K562@0.001022,MCF7@0.105128,NHEK@0.0135883,NHLF@0.056336,SKNSHRA@0.0045795, 0 0 0 0 ENSG00000229952.1 ENST00000446766.1 chr1:147494090-147498172 3 491 3587 intergenic -0.23 0 0,0,1 0 0,0,0 0 0 0 0 0 0 0 0 0 0 0 chimp,horse,human,macaque,orangutan, lincRNA lincRNA A549@0.209961,AG04450@0,BJ@0.0334575,GM12878@0.258158,H1HESC@0.325184,HELAS3@0.30434,HEPG2@0.722277,HMEC@0.033155,HSMM@0.0270455,HUVEC@0.0339415,K562@0.719232,MCF7@0.285007,NHEK@0.087288,NHLF@0,SKNSHRA@0.074759, 0 0 0 0 ENSG00000229952.1 ENST00000422157.1 chr1:147496676-147498172 2 437 1057 intergenic -1.05 0 0,0,1 0 0,0,0 0 0 0 0 0 0 0 0 0 0 0 chimp,human,macaque,orangutan, lincRNA lincRNA A549@0.209961,AG04450@0,BJ@0.0334575,GM12878@0.258158,H1HESC@0.325184,HELAS3@0.30434,HEPG2@0.722277,HMEC@0.033155,HSMM@0.0270455,HUVEC@0.0339415,K562@0.719232,MCF7@0.285007,NHEK@0.087288,NHLF@0,SKNSHRA@0.074759, 0 0 0 0 ENSG00000251150.1 ENST00000503154.1 chr1:147628427-147630473 2 1662 382 intergenic 4.78 0 0,0,1 0 0,0,0 0 0 0 0 0 0 0 0 0 0 1 chimp,human,macaque,orangutan, lincRNA lincRNA A549@0.0039135,AG04450@0.0053375,BJ@0.017503,GM12878@0.576585,H1HESC@0.0913315,HELAS3@0.066321,HEPG2@0.098236,HMEC@0,HSMM@0,HUVEC@0.133095,K562@21.8599,MCF7@0.0036245,NHEK@0.000793333,NHLF@0,SKNSHRA@0.0040975, 84 2 48 2 ENSG00000232265.1 ENST00000432038.1 chr1:147634989-147635692 2 588 113 intergenic -4.42 1 0,0,0 0 0,0,0 0 0 0 0 0 0 13.2244897959184 0 0 0 0 chimp,dog,horse,human,macaque,marmoset,orangutan,panda, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0.014064,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0.0077275,HUVEC@0,K562@0.488407,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000232265.1 ENST00000411978.1 chr1:147635092-147635692 2 450 148 intergenic -4.42 1 0,0,0 0 0,0,0 0 0 0 0 0 0 17.28 0 0 0 0 chimp,cow,dog,horse,human,macaque,marmoset,orangutan,panda, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0.014064,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0.0077275,HUVEC@0,K562@0.488407,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000226335.1 ENST00000443671.1 chr1:147668281-147672361 2 366 3712 intergenic -9.18 0 0,1,0 0 0,0,0 0 0 0 17.6311475409836 121.42025862069 0 19.1065573770492 127.597521551724 0 0 0 cat,chimp,cow,elephant,horse,human,macaque,marmoset,orangutan,panda,pig, lincRNA lincRNA A549@0.22027,AG04450@2.68412,BJ@2.82173,GM12878@0,H1HESC@5.17715,HELAS3@0.135662,HEPG2@0.192721,HMEC@0,HSMM@0.940195,HUVEC@0,K562@0,MCF7@0,NHEK@0.0107387,NHLF@0.668596,SKNSHRA@0.018528, 124 2 99 2 ENSG00000229438.1 ENST00000424741.1 chr1:147689214-147700938 4 532 11186 intergenic -3.07 0 0,0,0 0 0,0,0 0 10.6894332200966 0 86.468045112782 85.3558912926873 0 90.8834586466165 92.1513499016628 8.283 0 0 chimp,dog,elephant,guinea_pig,horse,human,macaque,marmoset,orangutan,panda,pig,rabbit, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000234283.1 ENST00000428035.1 chr1:147744014-147752855 3 417 8420 intergenic 3.32 1 0,0,1 0 0,0,0 0 0 0 0 0 26.344 0 0 26.714 0 0 chimp,human,macaque,orangutan, processed_transcript processed_transcript A549@0.030066,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0.088466,HEPG2@0,HMEC@0.009749,HSMM@0,HUVEC@0,K562@0,MCF7@0.009791,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000231196.2 ENST00000434245.1 chr1:147762995-147767966 3 675 4292 intergenic -1.29 0 0,0,1 0 0,0,0 0 0 0 0 0 0 0 83.2742311276794 0 0 0 chimp,human,macaque,marmoset,orangutan, lincRNA lincRNA A549@0.354717,AG04450@0.0057405,BJ@0,GM12878@0,H1HESC@0.172218,HELAS3@0.186409,HEPG2@0.0893285,HMEC@0.006039,HSMM@0.0443285,HUVEC@0,K562@0.0462045,MCF7@0.020879,NHEK@0.00960733,NHLF@0.005692,SKNSHRA@0, 0 0 0 0 ENSG00000238107.1 ENST00000427169.1 chr1:147767287-147769663 2 1916 458 intergenic 0.50 1 0,0,0 0 0,0,0 0 0 0 0 0 0 0 0 0 0 0 chimp,cow,horse,human,macaque,orangutan, lincRNA lincRNA A549@0.153014,AG04450@0.012673,BJ@0.0214385,GM12878@0,H1HESC@0.0229195,HELAS3@1.06813,HEPG2@0.062177,HMEC@0.010674,HSMM@0,HUVEC@0,K562@0.0337105,MCF7@0.004193,NHEK@0.002404,NHLF@0.002012,SKNSHRA@0, 0 0 0 0 ENSG00000244252.1 ENST00000445201.1 chr1:147767899-147769378 4 547 926 intergenic 3.48 0 0,0,0 0 0,0,0 0 0 0 0 0 0 0 0 0 0 0 chimp,horse,human,macaque,marmoset,orangutan,panda,pig, lincRNA lincRNA A549@0.158509,AG04450@0.0098265,BJ@0,GM12878@0,H1HESC@0.0714565,HELAS3@0.023551,HEPG2@0.070411,HMEC@0,HSMM@0.0134165,HUVEC@0,K562@0.008303,MCF7@0.014693,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000224481.1 ENST00000452996.1 chr1:147801124-147816764 3 1328 14308 intergenic 3.19 0 0,0,0 0 0,0,0 0 0 0 0 0 24.163 0 0 24.528 0 0 chimp,human,macaque,marmoset,orangutan, lincRNA lincRNA A549@0.0095015,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0.0145285,HEPG2@0.0020495,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0.026072,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000215863.2 ENST00000381475.3 chr1:147835127-147931933 4 2206 94594 exonic 9.99 0 0,1,0 0 0,0,0 41.4968268359021 1.79190012051504 67.452 74.9691749773345 5.95704801573039 387.206 77.7665457842248 24.3705203289849 445.638 0 0 chimp,human,macaque,marmoset,orangutan, lincRNA processed_transcript A549@2.47445,AG04450@6.8009,BJ@1.16518,GM12878@13.3246,H1HESC@2.13711,HELAS3@1.49801,HEPG2@1.07523,HMEC@0.104448,HSMM@0.255016,HUVEC@0.458407,K562@0.45559,MCF7@2.02729,NHEK@2.66883,NHLF@1.78452,SKNSHRA@1.76676, 69 2 0 0 ENSG00000231551.2 ENST00000426101.1 chr1:147887350-147901125 6 988 12777 intergenic 7.67 0 0,0,0 0 0,0,0 0 0 0 12.8876518218623 0 0 122.073886639676 7.35493464819598 0 0 0 chimp,horse,human,macaque,orangutan, lincRNA processed_transcript A549@0.168829,AG04450@0.0975925,BJ@0.056548,GM12878@0.107446,H1HESC@0.084043,HELAS3@0.101135,HEPG2@0.25392,HMEC@0.028965,HSMM@0.047038,HUVEC@0.0076555,K562@0.007831,MCF7@0.0448125,NHEK@0.205778,NHLF@0.012492,SKNSHRA@0.0179005, 1 96 8 5 ENSG00000231551.2 ENST00000445243.1 chr1:147887350-147901508 6 1549 12599 intergenic 7.67 0 0,0,1 0 0,0,0 0 0 0 8.22014202711427 0 0 84.9276952872821 6.56607667275181 0 0 0 cat,chimp,cow,human,macaque,marmoset,orangutan,panda, lincRNA processed_transcript A549@0.168829,AG04450@0.0975925,BJ@0.056548,GM12878@0.107446,H1HESC@0.084043,HELAS3@0.101135,HEPG2@0.25392,HMEC@0.028965,HSMM@0.047038,HUVEC@0.0076555,K562@0.007831,MCF7@0.0448125,NHEK@0.205778,NHLF@0.012492,SKNSHRA@0.0179005, 7 6 4 6 ENSG00000215863.2 ENST00000417554.1 chr1:147930762-147931881 2 211 906 exonic 0 0 0,1,1 0 0,0,0 325.905213270142 3.86754966887417 90.228 652.445497630332 128.828918322296 423.502 673.843601895735 130.905077262693 482.714 0 0 chimp,cow,dog,elephant,guinea_pig,horse,human,macaque,marmoset,mouse,opossum,orangutan,panda,pig,rabbit, lincRNA processed_transcript A549@2.47445,AG04450@6.8009,BJ@1.16518,GM12878@13.3246,H1HESC@2.13711,HELAS3@1.49801,HEPG2@1.07523,HMEC@0.104448,HSMM@0.255016,HUVEC@0.458407,K562@0.45559,MCF7@2.02729,NHEK@2.66883,NHLF@1.78452,SKNSHRA@1.76676, 14 5 9 5 ENSG00000236140.1 ENST00000427732.1 chr1:148246959-148248104 2 379 764 intergenic -13.07 0 0,0,1 0 0,0,0 0 0 0 0 0 0 0 0 0 0 0 chimp,human,macaque,marmoset,orangutan, lincRNA lincRNA A549@0.36925,AG04450@0.206209,BJ@0.057826,GM12878@0.140154,H1HESC@0.162791,HELAS3@0.206187,HEPG2@0.0456845,HMEC@0.021494,HSMM@0.0054005,HUVEC@0.042053,K562@0.120705,MCF7@0.566102,NHEK@0.013509,NHLF@0.0101855,SKNSHRA@0.292716, 4 8 1 8 ENSG00000237253.1 ENST00000415104.1 chr1:148598398-148599531 2 363 768 intergenic -12.03 0 0,0,1 0 0,0,0 0 0 0 0 0 22.866 0 0 23.754 0 0 chimp,human,macaque,marmoset,orangutan, lincRNA lincRNA A549@0.723213,AG04450@0.234425,BJ@0.172352,GM12878@0.198022,H1HESC@0.261466,HELAS3@0.415644,HEPG2@0.087619,HMEC@0.157054,HSMM@0.0112745,HUVEC@0.058529,K562@0.281114,MCF7@0.684756,NHEK@0.0682373,NHLF@0.0053455,SKNSHRA@0.801826, 4 8 1 8 ENSG00000237343.1 ENST00000455105.1 chr1:148760504-148761583 2 312 765 intergenic -12.03 0 0,0,0 0 0,0,0 0 0 0 0 0 0 0 0 0 0 0 chimp,human,macaque,marmoset,orangutan, lincRNA lincRNA A549@0.79355,AG04450@0.231774,BJ@0.031229,GM12878@0.220871,H1HESC@0.338157,HELAS3@0.410511,HEPG2@0.126584,HMEC@0.169523,HSMM@0.0262115,HUVEC@0.0340175,K562@0.304157,MCF7@1.27568,NHEK@0.07945,NHLF@0.024718,SKNSHRA@0.584109, 4 8 1 8 ENSG00000235887.2 ENST00000456469.1 chr1:148852393-148853717 3 405 915 intergenic 0.26 0 0,0,0 0 0,0,0 0 0 0 0 0 0 136.474074074074 0 0 0 0 chimp,human,macaque,orangutan, lincRNA lincRNA A549@0.0271725,AG04450@0,BJ@0.0175385,GM12878@0.004941,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0.059869,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0.0313455, 181 2 0 0 ENSG00000232527.3 ENST00000420597.1 chr1:148928322-148932920 2 197 4399 intergenic 0 0 0,1,0 1 0,0,0 0 0 0 0 0 0 0 47.0561491248011 0 0 0 cat,chimp,cow,human,macaque,marmoset,mouse,orangutan,panda, lincRNA lincRNA A549@6.42972,AG04450@11.2069,BJ@8.27039,GM12878@2.09103,H1HESC@0.19629,HELAS3@4.00061,HEPG2@12.8643,HMEC@1.7416,HSMM@13.947,HUVEC@7.57493,K562@1.58974,MCF7@3.55442,NHEK@12.2896,NHLF@8.82829,SKNSHRA@13.7723, 0 0 0 0 ENSG00000232527.3 ENST00000452399.1 chr1:148928322-148951594 3 546 22722 intergenic 1.65 0 1,1,1 1 0,0,0 0 0 0 0 2.31528914708212 0 0 11.5738491329989 0 0 0 chimp,dog,human,macaque,orangutan, lincRNA lincRNA A549@6.42972,AG04450@11.2069,BJ@8.27039,GM12878@2.09103,H1HESC@0.19629,HELAS3@4.00061,HEPG2@12.8643,HMEC@1.7416,HSMM@13.947,HUVEC@7.57493,K562@1.58974,MCF7@3.55442,NHEK@12.2896,NHLF@8.82829,SKNSHRA@13.7723, 0 0 0 0 ENSG00000232527.3 ENST00000294715.2 chr1:148928331-148933368 3 265 4768 intergenic 0 0 0,1,0 1 0,0,0 0 0 0 0 0 0 0 43.4144295302013 0 0 0 cat,chimp,cow,dog,elephant,guinea_pig,human,macaque,marmoset,mouse,orangutan,panda,rat, lincRNA lincRNA A549@6.42972,AG04450@11.2069,BJ@8.27039,GM12878@2.09103,H1HESC@0.19629,HELAS3@4.00061,HEPG2@12.8643,HMEC@1.7416,HSMM@13.947,HUVEC@7.57493,K562@1.58974,MCF7@3.55442,NHEK@12.2896,NHLF@8.82829,SKNSHRA@13.7723, 0 0 0 0 ENSG00000232527.3 ENST00000539543.1 chr1:148928345-148951595 4 601 22643 intergenic 6.51 0 1,1,1 1 0,0,0 0 0 0 0 2.32336704500287 0 0 11.6142295632204 0 0 0 cat,chimp,cow,dog,guinea_pig,human,macaque, lincRNA lincRNA A549@6.42972,AG04450@11.2069,BJ@8.27039,GM12878@2.09103,H1HESC@0.19629,HELAS3@4.00061,HEPG2@12.8643,HMEC@1.7416,HSMM@13.947,HUVEC@7.57493,K562@1.58974,MCF7@3.55442,NHEK@12.2896,NHLF@8.82829,SKNSHRA@13.7723, 0 0 0 0 ENSG00000232527.3 ENST00000457390.1 chr1:148932785-148933579 2 423 369 intergenic 0.18 0 0,0,1 0 0,0,0 0 0 0 0 0 0 0 0 207 0 0 chimp,dog,guinea_pig,human,macaque,mouse,orangutan,panda, lincRNA lincRNA A549@6.42972,AG04450@11.2069,BJ@8.27039,GM12878@2.09103,H1HESC@0.19629,HELAS3@4.00061,HEPG2@12.8643,HMEC@1.7416,HSMM@13.947,HUVEC@7.57493,K562@1.58974,MCF7@3.55442,NHEK@12.2896,NHLF@8.82829,SKNSHRA@13.7723, 0 0 0 0 ENSG00000236245.1 ENST00000421174.1 chr1:149186303-149187373 2 903 165 intergenic 8.77 0 0,0,0 0 0,0,0 0 0 20.16 0 0 32.338 0 0 32.042 0 0 chimp,human,macaque,marmoset,orangutan, lincRNA lincRNA A549@0.0308695,AG04450@0.003271,BJ@0.0071515,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0.0030725, 0 0 0 0 ENSG00000232721.1 ENST00000443018.1 chr1:149230716-149232554 2 1071 765 intergenic 0.25 1 0,0,0 0 0,0,0 0 0 0 0 0 0 0 0 0 0 0 chimp,human,macaque,marmoset,orangutan, lincRNA processed_transcript A549@0.249052,AG04450@0.01494,BJ@0,GM12878@0.0253405,H1HESC@0.0119725,HELAS3@0.027665,HEPG2@0,HMEC@0.007632,HSMM@0,HUVEC@0,K562@0,MCF7@0.0398575,NHEK@0.0107697,NHLF@0.0090315,SKNSHRA@0.0042365, 39 3 0 0 ENSG00000223779.3 ENST00000457216.1 chr1:149239551-149245285 2 335 5397 intergenic 0 0 0,1,1 0 0,0,0 0 0 10.34 49.844776119403 3.64739670187141 0 424.402985074627 20.3096164535853 0 0 0 cat,chimp,cow,dog,elephant,guinea_pig,horse,human,macaque,marmoset,opossum,orangutan,panda,rabbit,rat, processed_transcript processed_transcript A549@0.0643085,AG04450@0.15156,BJ@0,GM12878@0.484689,H1HESC@0.220173,HELAS3@0.368724,HEPG2@0.071888,HMEC@0.009257,HSMM@0.046568,HUVEC@0.003178,K562@0.0612135,MCF7@0.662027,NHEK@0.607507,NHLF@0.029151,SKNSHRA@0.16851, 0 0 0 0 ENSG00000223779.3 ENST00000325963.7 chr1:149239866-149265510 7 5052 20580 intergenic 14.09 0 0,0,0 0 0,0,0 12.7593032462391 0 10.34 51.2787015043547 1.05291545189504 0 431.895486935867 11.3737123420797 0 0 0 cat,chimp,cow,dog,elephant,guinea_pig,horse,human,macaque,marmoset,mouse,opossum,orangutan,panda,pig,platypus,rabbit,rat, processed_transcript processed_transcript A549@0.0643085,AG04450@0.15156,BJ@0,GM12878@0.484689,H1HESC@0.220173,HELAS3@0.368724,HEPG2@0.071888,HMEC@0.009257,HSMM@0.046568,HUVEC@0.003178,K562@0.0612135,MCF7@0.662027,NHEK@0.607507,NHLF@0.029151,SKNSHRA@0.16851, 57 2 35 2 ENSG00000223779.3 ENST00000430442.1 chr1:149239868-149255822 6 1556 14388 intergenic 14.62 0 0,0,0 0 0,0,0 0 0 10.34 23.4383033419023 0.75 0 112.564267352185 7.16812621629135 0 0 0 cat,chimp,cow,human,macaque,marmoset,orangutan,panda,rabbit, processed_transcript processed_transcript A549@0.0643085,AG04450@0.15156,BJ@0,GM12878@0.484689,H1HESC@0.220173,HELAS3@0.368724,HEPG2@0.071888,HMEC@0.009257,HSMM@0.046568,HUVEC@0.003178,K562@0.0612135,MCF7@0.662027,NHEK@0.607507,NHLF@0.029151,SKNSHRA@0.16851, 7 6 4 6 ENSG00000223779.3 ENST00000442049.1 chr1:149239894-149250552 3 451 10203 intergenic 14.09 0 0,0,0 0 0,0,0 0 0 10.34 56.7450110864745 1.05763010879153 0 348.341463414634 9.66676467705577 0 0 0 chimp,cow,dog,elephant,horse,human,macaque,marmoset,orangutan,panda,pig,rabbit,rat, processed_transcript processed_transcript A549@0.0643085,AG04450@0.15156,BJ@0,GM12878@0.484689,H1HESC@0.220173,HELAS3@0.368724,HEPG2@0.071888,HMEC@0.009257,HSMM@0.046568,HUVEC@0.003178,K562@0.0612135,MCF7@0.662027,NHEK@0.607507,NHLF@0.029151,SKNSHRA@0.16851, 0 0 0 0 ENSG00000223779.3 ENST00000435115.1 chr1:149242295-149245215 2 294 2624 intergenic 0 0 0,0,0 0 0,0,0 0 0 0 43.8299319727891 0.728658536585366 0 370.996598639456 4.55792682926829 0 0 0 cat,chimp,cow,dog,elephant,guinea_pig,horse,human,macaque,marmoset,opossum,orangutan,panda,rabbit,rat, processed_transcript processed_transcript A549@0.0643085,AG04450@0.15156,BJ@0,GM12878@0.484689,H1HESC@0.220173,HELAS3@0.368724,HEPG2@0.071888,HMEC@0.009257,HSMM@0.046568,HUVEC@0.003178,K562@0.0612135,MCF7@0.662027,NHEK@0.607507,NHLF@0.029151,SKNSHRA@0.16851, 0 0 0 0 ENSG00000223779.3 ENST00000439719.1 chr1:149245050-149245801 2 538 211 intergenic 0.72 0 0,0,0 0 0,0,0 0 0 0 31.0371747211896 0 0 264.265799256506 20.0710900473934 10.016 0 0 chimp,human,macaque,marmoset,orangutan, processed_transcript processed_transcript A549@0.0643085,AG04450@0.15156,BJ@0,GM12878@0.484689,H1HESC@0.220173,HELAS3@0.368724,HEPG2@0.071888,HMEC@0.009257,HSMM@0.046568,HUVEC@0.003178,K562@0.0612135,MCF7@0.662027,NHEK@0.607507,NHLF@0.029151,SKNSHRA@0.16851, 1 96 8 5 ENSG00000223779.3 ENST00000425624.1 chr1:149250540-149251326 3 487 295 intergenic -4.86 0 0,0,0 0 0,0,0 0 0 0 0 0 0 0 0 0 0 0 chimp,cow,dog,elephant,horse,human,macaque,marmoset,orangutan,panda, processed_transcript processed_transcript A549@0.0643085,AG04450@0.15156,BJ@0,GM12878@0.484689,H1HESC@0.220173,HELAS3@0.368724,HEPG2@0.071888,HMEC@0.009257,HSMM@0.046568,HUVEC@0.003178,K562@0.0612135,MCF7@0.662027,NHEK@0.607507,NHLF@0.029151,SKNSHRA@0.16851, 27 4 18 4 ENSG00000233430.2 ENST00000449024.1 chr1:149305910-149313076 3 534 6628 intergenic 13.19 0 0,0,0 0 0,0,0 20.1404494382022 0 0 29.6161048689139 9.84595654797827 0.54 111.001872659176 12.2578455039228 6.933 0 0 chimp,cow,dog,elephant,horse,human,macaque,marmoset,orangutan,panda,pig,rabbit, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0.348202,HELAS3@0,HEPG2@0.0304775,HMEC@0.017346,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 152 2 96 2 ENSG00000234571.1 ENST00000415338.1 chr1:149372292-149379646 2 3538 3814 intergenic 6.90 1 0,0,0 0 0,0,0 0 0 0 1.78405879027699 17.4520188778186 0 1.84511023176936 26.2577346617724 0 0 0 chimp,human,orangutan, lincRNA lincRNA A549@0.0799615,AG04450@0.040997,BJ@0.053217,GM12878@0.0050685,H1HESC@0.0162925,HELAS3@0.0185115,HEPG2@0.0012035,HMEC@0.00347,HSMM@0.0460635,HUVEC@0,K562@0.101142,MCF7@0.666713,NHEK@0.0250947,NHLF@0.0125855,SKNSHRA@0.113957, 30 3 0 0 ENSG00000230186.1 ENST00000444624.1 chr1:149400063-149429348 4 490 28789 exonic 7.00 0 0,0,0 0 0,0,0 82.1530612244898 4.58230574177637 0 128.95306122449 10.588245510438 59.252 155.218367346939 25.6684497551148 99.205 0 0 chimp,cow,dog,horse,human,macaque,marmoset,mouse,pig,rabbit,rat, antisense antisense A549@0,AG04450@0.004537,BJ@0.035615,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0.0262245,HUVEC@0.003629,K562@0.0034655,MCF7@0.0030685,NHEK@0,NHLF@0.002912,SKNSHRA@0, 0 0 101 2 ENSG00000230186.1 ENST00000435113.1 chr1:149400063-149429580 3 667 28846 exonic 6.39 0 0,0,1 0 0,0,0 60.352323838081 4.57325105733897 0 94.7331334332834 10.5673230257228 59.252 114.028485757121 25.617728627886 99.205 0 0 chimp,cow,guinea_pig,horse,human,macaque,mouse,orangutan,pig,rabbit, antisense antisense A549@0,AG04450@0.004537,BJ@0.035615,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0.0262245,HUVEC@0.003629,K562@0.0034655,MCF7@0.0030685,NHEK@0,NHLF@0.002912,SKNSHRA@0, 131 2 80 2 ENSG00000232151.3 ENST00000417986.1 chr1:149575482-149615903 3 321 40096 intergenic 7.96 0 0,0,0 0 0,1,0 0 0 0 209.109034267913 26.4853601356744 0 211.526479750779 29.3961492418196 0 0 0 chimp,cow,dog,elephant,horse,human,macaque,marmoset,orangutan,pig, processed_transcript processed_transcript A549@3.17588,AG04450@6.82594,BJ@1.82231,GM12878@10.2054,H1HESC@3.93917,HELAS3@2.61422,HEPG2@1.67708,HMEC@3.88029,HSMM@1.62438,HUVEC@1.11163,K562@3.40841,MCF7@5.96036,NHEK@4.11752,NHLF@2.06861,SKNSHRA@2.44619, 0 0 0 0 ENSG00000232151.3 ENST00000440084.1 chr1:149576161-149641425 7 2095 63157 intergenic 15.34 0 0,1,0 0 0,1,0 0 0 0 187.038663484487 9.57884320027867 176.291 234.789976133652 12.1643206612094 180.813 0 1 chimp,human,macaque,orangutan, processed_transcript processed_transcript A549@3.17588,AG04450@6.82594,BJ@1.82231,GM12878@10.2054,H1HESC@3.93917,HELAS3@2.61422,HEPG2@1.67708,HMEC@3.88029,HSMM@1.62438,HUVEC@1.11163,K562@3.40841,MCF7@5.96036,NHEK@4.11752,NHLF@2.06861,SKNSHRA@2.44619, 7 6 4 6 ENSG00000232151.3 ENST00000434047.1 chr1:149576181-149615975 3 513 39277 intergenic 7.96 0 0,1,0 0 0,1,0 0 0 0 408.72514619883 18.5322198742266 190.131 413.450292397661 21.3421340733763 194.813 0 0 chimp,human,macaque,orangutan,pig,rat, processed_transcript processed_transcript A549@3.17588,AG04450@6.82594,BJ@1.82231,GM12878@10.2054,H1HESC@3.93917,HELAS3@2.61422,HEPG2@1.67708,HMEC@3.88029,HSMM@1.62438,HUVEC@1.11163,K562@3.40841,MCF7@5.96036,NHEK@4.11752,NHLF@2.06861,SKNSHRA@2.44619, 14 5 9 5 ENSG00000232151.3 ENST00000444581.1 chr1:149576450-149616783 2 1268 39063 intergenic 7.96 1 0,1,0 0 0,1,0 0 0 0 136.435331230284 14.8427412129125 376.279 138.01261829653 17.6242224099531 383.113 1 1 chimp,human,macaque,marmoset,orangutan, processed_transcript processed_transcript A549@3.17588,AG04450@6.82594,BJ@1.82231,GM12878@10.2054,H1HESC@3.93917,HELAS3@2.61422,HEPG2@1.67708,HMEC@3.88029,HSMM@1.62438,HUVEC@1.11163,K562@3.40841,MCF7@5.96036,NHEK@4.11752,NHLF@2.06861,SKNSHRA@2.44619, 1 96 20 3 ENSG00000232151.3 ENST00000455295.1 chr1:149576472-149591238 2 388 14376 intergenic 1.78 0 0,1,0 0 0,1,0 0 0 0 406.639175257732 28.6140094602115 391.503 411.340206185567 33.6357122982749 398.513 0 0 chimp,cow,horse,human,mouse,opossum,orangutan,pig, processed_transcript processed_transcript A549@3.17588,AG04450@6.82594,BJ@1.82231,GM12878@10.2054,H1HESC@3.93917,HELAS3@2.61422,HEPG2@1.67708,HMEC@3.88029,HSMM@1.62438,HUVEC@1.11163,K562@3.40841,MCF7@5.96036,NHEK@4.11752,NHLF@2.06861,SKNSHRA@2.44619, 0 0 0 0 ENSG00000232151.3 ENST00000445225.1 chr1:149576490-149651107 9 5721 68880 intergenic 9.38 0 0,1,1 0 0,1,0 0 0 0 28.69743051914 8.78297038327526 403.959 407.88393637476 12.2656068524971 411.113 0 0 chimp,cow,dog,elephant,guinea_pig,horse,human,macaque,marmoset,mouse,opossum,orangutan,panda,rabbit,rat, processed_transcript processed_transcript A549@3.17588,AG04450@6.82594,BJ@1.82231,GM12878@10.2054,H1HESC@3.93917,HELAS3@2.61422,HEPG2@1.67708,HMEC@3.88029,HSMM@1.62438,HUVEC@1.11163,K562@3.40841,MCF7@5.96036,NHEK@4.11752,NHLF@2.06861,SKNSHRA@2.44619, 57 2 35 2 ENSG00000232151.3 ENST00000453293.1 chr1:149576491-149581061 2 524 4044 intergenic 5.14 0 0,1,0 0 0,1,0 0 0 0 276.007633587786 68.1063303659743 404.651 279.198473282443 79.8283877349159 411.813 0 0 chimp,dog,elephant,horse,human,macaque,marmoset,mouse,orangutan,panda, processed_transcript processed_transcript A549@3.17588,AG04450@6.82594,BJ@1.82231,GM12878@10.2054,H1HESC@3.93917,HELAS3@2.61422,HEPG2@1.67708,HMEC@3.88029,HSMM@1.62438,HUVEC@1.11163,K562@3.40841,MCF7@5.96036,NHEK@4.11752,NHLF@2.06861,SKNSHRA@2.44619, 0 0 0 0 ENSG00000232151.3 ENST00000443884.1 chr1:149576555-149616786 3 731 39496 intergenic 7.96 1 0,1,0 0 0,1,0 0 0 0 137.264021887825 14.6800182296941 448.939 138.850889192886 17.4310056714604 456.613 0 0 chimp,human,macaque,marmoset,mouse,orangutan,pig, processed_transcript processed_transcript A549@3.17588,AG04450@6.82594,BJ@1.82231,GM12878@10.2054,H1HESC@3.93917,HELAS3@2.61422,HEPG2@1.67708,HMEC@3.88029,HSMM@1.62438,HUVEC@1.11163,K562@3.40841,MCF7@5.96036,NHEK@4.11752,NHLF@2.06861,SKNSHRA@2.44619, 4 8 1 8 ENSG00000233368.1 ENST00000447883.1 chr1:149576591-149577296 2 559 144 intergenic 11.30 0 1,1,1 0 0,0,0 0 0 0 188.767441860465 91.9652777777778 188.555 220.048300536673 108.6875 196.224 0 0 cat,chimp,cow,dog,elephant,guinea_pig,horse,human,macaque,marmoset,mouse,orangutan,panda,pig,rabbit,rat, lincRNA lincRNA A549@0.0417585,AG04450@0.320512,BJ@0.262946,GM12878@1.98555,H1HESC@1.38577,HELAS3@0.609823,HEPG2@0.700609,HMEC@0.372239,HSMM@0.142721,HUVEC@0.0731125,K562@0.110722,MCF7@0.45369,NHEK@0.273266,NHLF@0.209859,SKNSHRA@0.614775, 0 0 0 0 ENSG00000232151.3 ENST00000452356.1 chr1:149576633-149591710 4 401 14670 intergenic 1.78 0 0,1,0 0 0,1,0 0 0 0 186.588528678304 26.0288343558282 502.915 193.177057356608 30.8010224948875 511.213 0 0 cat,chimp,cow,dog,elephant,horse,human,macaque,marmoset,orangutan,pig, processed_transcript processed_transcript A549@3.17588,AG04450@6.82594,BJ@1.82231,GM12878@10.2054,H1HESC@3.93917,HELAS3@2.61422,HEPG2@1.67708,HMEC@3.88029,HSMM@1.62438,HUVEC@1.11163,K562@3.40841,MCF7@5.96036,NHEK@4.11752,NHLF@2.06861,SKNSHRA@2.44619, 0 0 0 0 ENSG00000229801.1 ENST00000428508.1 chr1:149590752-149591762 2 396 612 intergenic -1.23 0 0,0,1 0 0,0,0 0 0 0 0 0 62.815 0 0 77.677 0 0 cat,chimp,cow,dog,horse,human,macaque,marmoset,orangutan,panda,pig,rabbit,rat, lincRNA lincRNA A549@0,AG04450@0.312455,BJ@0.221716,GM12878@0.029447,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0.523676,HUVEC@0,K562@5.73159,MCF7@0.025601,NHEK@0.0122077,NHLF@0.087428,SKNSHRA@0.041011, 0 0 0 0 ENSG00000232151.3 ENST00000419105.1 chr1:149591179-149592306 2 775 350 intergenic -2.16 0 0,0,0 0 0,0,0 0 0 0 42.7664516129032 0 0 44.778064516129 0 0 0 0 cat,chimp,cow,dog,guinea_pig,horse,human,macaque,marmoset,mouse,orangutan,panda,pig,rabbit,rat, processed_transcript processed_transcript A549@3.17588,AG04450@6.82594,BJ@1.82231,GM12878@10.2054,H1HESC@3.93917,HELAS3@2.61422,HEPG2@1.67708,HMEC@3.88029,HSMM@1.62438,HUVEC@1.11163,K562@3.40841,MCF7@5.96036,NHEK@4.11752,NHLF@2.06861,SKNSHRA@2.44619, 0 0 0 0 ENSG00000232151.3 ENST00000414422.1 chr1:149605640-149633208 3 766 26798 intergenic 1.55 0 0,1,0 0 0,1,0 0 0 0 23.6201044386423 2.28199865661617 0 121.865535248042 3.83674154787671 0 0 0 chimp,cow,elephant,guinea_pig,horse,human,macaque,marmoset,orangutan, processed_transcript processed_transcript A549@3.17588,AG04450@6.82594,BJ@1.82231,GM12878@10.2054,H1HESC@3.93917,HELAS3@2.61422,HEPG2@1.67708,HMEC@3.88029,HSMM@1.62438,HUVEC@1.11163,K562@3.40841,MCF7@5.96036,NHEK@4.11752,NHLF@2.06861,SKNSHRA@2.44619, 20 4 13 4 ENSG00000232151.3 ENST00000457991.1 chr1:149605701-149616657 3 600 10352 intergenic 8.56 1 0,1,0 0 0,1,0 0 0 0 0 4.26429675425039 0 0 4.21638330757342 0 1 1 chimp,human,macaque,marmoset,orangutan, processed_transcript processed_transcript A549@3.17588,AG04450@6.82594,BJ@1.82231,GM12878@10.2054,H1HESC@3.93917,HELAS3@2.61422,HEPG2@1.67708,HMEC@3.88029,HSMM@1.62438,HUVEC@1.11163,K562@3.40841,MCF7@5.96036,NHEK@4.11752,NHLF@2.06861,SKNSHRA@2.44619, 0 0 0 0 ENSG00000232151.3 ENST00000439906.1 chr1:149627007-149632691 2 335 5347 intergenic 0 0 0,0,0 0 0,1,0 0 0 0 54.0089552238806 1.74322049747522 0 278.653731343284 9.32597718346737 0 0 0 cat,chimp,cow,dog,elephant,guinea_pig,horse,human,macaque,marmoset,mouse,opossum,orangutan,panda,rabbit, processed_transcript processed_transcript A549@3.17588,AG04450@6.82594,BJ@1.82231,GM12878@10.2054,H1HESC@3.93917,HELAS3@2.61422,HEPG2@1.67708,HMEC@3.88029,HSMM@1.62438,HUVEC@1.11163,K562@3.40841,MCF7@5.96036,NHEK@4.11752,NHLF@2.06861,SKNSHRA@2.44619, 0 0 8 5 ENSG00000232151.3 ENST00000430052.1 chr1:149636144-149636930 3 487 295 intergenic -3.72 0 0,1,0 0 0,1,0 0 0 0 18.8501026694045 0 0 20.1067761806982 0 0 0 0 chimp,cow,dog,elephant,horse,human,macaque,marmoset,orangutan,panda,rabbit, processed_transcript processed_transcript A549@3.17588,AG04450@6.82594,BJ@1.82231,GM12878@10.2054,H1HESC@3.93917,HELAS3@2.61422,HEPG2@1.67708,HMEC@3.88029,HSMM@1.62438,HUVEC@1.11163,K562@3.40841,MCF7@5.96036,NHEK@4.11752,NHLF@2.06861,SKNSHRA@2.44619, 27 4 18 4 ENSG00000223759.1 ENST00000443602.1 chr1:149672997-149677287 2 1986 2302 encompassing 4.33 0 0,0,1 0 0,0,0 0 0 0 0 0 0 0 0 0 0 0 chimp,cow,human,macaque,orangutan, lincRNA processed_transcript A549@0.0337215,AG04450@0.284103,BJ@0.16242,GM12878@0.438654,H1HESC@0.536127,HELAS3@0.375089,HEPG2@0.504431,HMEC@0.388806,HSMM@0.155676,HUVEC@0.0168195,K562@0.0316125,MCF7@1.6295,NHEK@0.619862,NHLF@0.652311,SKNSHRA@0.391022, 0 0 0 0 ENSG00000234232.1 ENST00000432978.1 chr1:149691432-149698605 3 534 6635 intergenic 16.32 0 0,0,1 0 0,0,0 0 0 0 85.0880149812734 5.74107008289374 4.376 139.84456928839 10.3745290128109 4.674 0 0 chimp,cow,dog,elephant,guinea_pig,horse,human,macaque,marmoset,orangutan,pig,rabbit, lincRNA lincRNA A549@0,AG04450@0.005513,BJ@0,GM12878@0,H1HESC@0.80868,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0.0036335,SKNSHRA@0, 152 2 96 2 ENSG00000233030.2 ENST00000428289.1 chr1:149757215-149764576 2 3541 3818 exonic 6.36 0 0,0,0 0 0,0,0 0 0 0 4.89438011861056 19.3119434258774 0 7.84778311211522 22.03404924044 0 0 0 chimp,human,orangutan, antisense antisense A549@0.111383,AG04450@0.030998,BJ@0.0333515,GM12878@0.0102665,H1HESC@0.043032,HELAS3@0.0203425,HEPG2@0.00729,HMEC@0.006933,HSMM@0.0236505,HUVEC@0,K562@0.0814705,MCF7@2.46884,NHEK@0.04317,NHLF@0.0147155,SKNSHRA@0.183511, 30 3 0 0 ENSG00000228126.1 ENST00000416894.1 chr1:150488233-150490508 2 564 1709 intergenic 1.17 0 0,1,0 0 0,0,0 0 0 0 0 0 3.794 0 0 220.376 0 0 chimp,human,macaque,marmoset,orangutan, lincRNA lincRNA A549@0.0952435,AG04450@0.0548765,BJ@0.067388,GM12878@0.098939,H1HESC@0.133302,HELAS3@0.107293,HEPG2@0.151724,HMEC@0.014469,HSMM@0.0576675,HUVEC@0.057349,K562@0.373771,MCF7@0.100505,NHEK@0.057867,NHLF@0.0737505,SKNSHRA@0.254535, 0 0 0 0 ENSG00000237781.1 ENST00000442435.1 chr1:150521040-150530949 7 1290 8607 exonic 14.70 0 0,1,1 0 0,0,0 101.708527131783 56.7266178691763 76.843 121.731782945736 84.9477169745556 194.672 142.670542635659 82.1620773788777 175.429 0 0 cat,chimp,cow,elephant,guinea_pig,horse,human,macaque,marmoset,orangutan,panda, antisense antisense A549@0.238489,AG04450@0.16568,BJ@0.212642,GM12878@0.110708,H1HESC@0.274023,HELAS3@0.257395,HEPG2@0.201205,HMEC@0.028413,HSMM@0.120519,HUVEC@2.39811,K562@0.323462,MCF7@0.451184,NHEK@0.132457,NHLF@0.131972,SKNSHRA@0.363299, 0 0 0 0 ENSG00000248003.1 ENST00000500237.1 chr1:150565059-150590027 3 1957 23007 intronic -1.59 0 0,1,0 0 0,0,0 0 0.981223106011214 0 0 3.62024601208328 0 0 5.0646759681836 0 1 1 chimp,human,macaque,marmoset,orangutan, lincRNA lincRNA A549@0.0034415,AG04450@0.003021,BJ@0.014888,GM12878@0.001492,H1HESC@0.014974,HELAS3@0.039329,HEPG2@0.030467,HMEC@0,HSMM@0.002326,HUVEC@0.0314805,K562@0.0213015,MCF7@0.080501,NHEK@0.000651333,NHLF@0.0415775,SKNSHRA@0.025921, 0 0 0 0 ENSG00000231073.1 ENST00000412838.1 chr1:150945599-150948010 3 365 2042 intronic 7.03 0 0,0,1 0 0,0,0 0 4.29872673849168 0 28.3424657534247 35.7825661116552 6.407 27.841095890411 32.6253672869736 5.29 0 0 chimp,human,macaque,marmoset,orangutan, antisense antisense A549@0.0359215,AG04450@0,BJ@0,GM12878@0.007947,H1HESC@0.015984,HELAS3@0.0249055,HEPG2@0.052583,HMEC@0,HSMM@0.011786,HUVEC@0.008087,K562@0.006674,MCF7@0.0054635,NHEK@0.0265217,NHLF@0.005302,SKNSHRA@0.026074, 0 0 0 0 ENSG00000224645.1 ENST00000422153.1 chr1:151313124-151314442 2 356 960 exonic -8.75 1 1,1,1 0 0,0,0 174.205056179775 10.6677083333333 13.42 192.418539325843 25.309375 38.685 196.398876404494 27.365625 44.318 0 0 chimp,cow,dog,elephant,horse,human,macaque,marmoset,mouse,orangutan,panda,pig,rabbit,rat, antisense antisense A549@0,AG04450@0,BJ@0,GM12878@0.0299875,H1HESC@0,HELAS3@0.013057,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0.016626,K562@0.0205815,MCF7@0,NHEK@0.00713167,NHLF@0,SKNSHRA@0.0063485, 0 0 0 0 ENSG00000237976.1 ENST00000455503.1 chr1:151319443-151320503 2 616 442 exonic -4.91 0 0,1,0 1 0,0,0 66.551948051948 482.705882352941 337.692 56.5454545454546 409.798642533937 111.687 48.8555194805195 606.305429864253 102.846 0 0 cat,chimp,cow,dog,horse,human,macaque,marmoset,orangutan,panda,pig, antisense antisense A549@0.614566,AG04450@0.473977,BJ@0.117609,GM12878@3.34489,H1HESC@2.76484,HELAS3@1.36933,HEPG2@0.674478,HMEC@0.238522,HSMM@0.618141,HUVEC@1.04548,K562@1.55188,MCF7@0.291297,NHEK@0.235029,NHLF@0.33018,SKNSHRA@0.990053, 0 0 0 0 ENSG00000227045.1 ENST00000457548.1 chr1:151673502-151680862 2 384 6974 intronic 6.12 0 0,1,1 0 0,0,0 0 170.663320906223 0 0 182.830800114712 0 0 181.350587897907 0 0 0 chimp,dog,elephant,horse,human,macaque,marmoset,orangutan,panda, antisense antisense A549@0.0329535,AG04450@0.01416,BJ@0,GM12878@0.0190245,H1HESC@0.0064105,HELAS3@0.01211,HEPG2@0,HMEC@0.010608,HSMM@0,HUVEC@0,K562@0.0060155,MCF7@0.041904,NHEK@0.0167083,NHLF@0,SKNSHRA@0.023552, 0 0 0 0 ENSG00000232937.1 ENST00000420382.1 chr1:151738185-151738865 2 422 256 intronic -9.99 0 0,1,0 0 0,0,0 0 0 0 13.9336492890995 0 0 14.4075829383886 0 3.159 0 0 chimp,horse,human,macaque,marmoset,orangutan, processed_transcript processed_transcript A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000203288.3 ENST00000533481.1 chr1:151763280-151764021 2 551 188 exonic 8.40 0 0,1,0 1 0,0,0 0 0 0 14.0689655172414 9.79255319148936 32.722 13.9818511796733 9.86702127659574 30.779 0 0 cat,chimp,elephant,human,macaque,marmoset,orangutan,panda, antisense antisense A549@0.421466,AG04450@0.0447545,BJ@0.18937,GM12878@0.218199,H1HESC@1.02626,HELAS3@1.05621,HEPG2@0.9494,HMEC@0.239476,HSMM@0.171287,HUVEC@0.569339,K562@1.59828,MCF7@4.4201,NHEK@0.225762,NHLF@0.058579,SKNSHRA@0.631072, 0 0 0 0 ENSG00000203288.3 ENST00000389897.3 chr1:151763318-151766878 2 990 2568 exonic 8.40 1 1,1,1 1 0,0,0 0 0 0 0 7.80646417445483 32.722 4.41818181818182 9.67250778816199 30.779 0 0 chimp,human,macaque,marmoset,orangutan, antisense antisense A549@0.421466,AG04450@0.0447545,BJ@0.18937,GM12878@0.218199,H1HESC@1.02626,HELAS3@1.05621,HEPG2@0.9494,HMEC@0.239476,HSMM@0.171287,HUVEC@0.569339,K562@1.59828,MCF7@4.4201,NHEK@0.225762,NHLF@0.058579,SKNSHRA@0.631072, 0 0 0 0 ENSG00000234614.1 ENST00000434182.1 chr1:151814353-151822861 3 503 8001 intronic 4.46 0 0,0,0 0 0,0,0 0 4.99212598425197 0 13.5944333996024 10.6760404949381 9.18 14.3697813121272 10.5104361954756 9.792 0 0 chimp,horse,human,macaque,marmoset,orangutan,pig, antisense antisense A549@0.120829,AG04450@0.202007,BJ@0.52943,GM12878@4.96371,H1HESC@3.01455,HELAS3@3.37035,HEPG2@0.56487,HMEC@2.60779,HSMM@0.357034,HUVEC@0.996696,K562@0,MCF7@2.14628,NHEK@0.368359,NHLF@0.425729,SKNSHRA@0.0551605, 0 0 0 0 ENSG00000229021.2 ENST00000432386.1 chr1:151967007-152015250 13 4096 44123 encompassing 4.27 0 0,0,1 0 0,0,0 0 3.24755796296716 8.14 0 4.96083675180745 16.779 0 5.34113727534392 9.365 0 0 chimp,human,macaque,orangutan, processed_transcript processed_transcript A549@0.170542,AG04450@0.006047,BJ@0,GM12878@0,H1HESC@0.046671,HELAS3@0.027751,HEPG2@0.0073025,HMEC@0.016941,HSMM@0.004114,HUVEC@0.0081685,K562@0,MCF7@0.171544,NHEK@0.142626,NHLF@0.0014245,SKNSHRA@0.0022105, 0 0 0 0 ENSG00000226716.1 ENST00000429230.1 chr1:152095010-152097541 2 787 1742 intergenic -1.47 0 0,1,1 0 0,0,0 0 0 0 34.9885641677255 2.47990815154994 4.998 195.250317662008 1.9150401836969 3.41 0 0 chimp,human,macaque,mouse,opossum,orangutan,rat, antisense antisense A549@0.0125035,AG04450@0,BJ@0,GM12878@0,H1HESC@0.0037665,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0.046271,NHEK@0.006693,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000237975.1 ENST00000420707.1 chr1:152161827-152313586 9 897 150846 intronic -1.49 0 0,1,0 0 0,0,0 0 3.62293332272649 0 0 4.81202020603795 4.08 0 5.91096880261989 12.635 0 0 chimp,dog,elephant,horse,human,macaque,marmoset,orangutan,pig,rabbit, lincRNA processed_transcript A549@0.864648,AG04450@0.002561,BJ@0.354683,GM12878@0.004465,H1HESC@0,HELAS3@0.0146285,HEPG2@0.023741,HMEC@0.054271,HSMM@0.101223,HUVEC@0.170671,K562@0,MCF7@0.0095875,NHEK@0.642003,NHLF@0.178566,SKNSHRA@0.180772, 0 0 0 0 ENSG00000236427.1 ENST00000429352.1 chr1:152178334-152179533 2 395 802 intergenic -8.29 0 0,0,1 0 0,0,0 0 0 0 8.1620253164557 36.5062344139651 0 8.72151898734177 38.3216957605985 0 0 0 chimp,dog,elephant,horse,human,macaque,marmoset,orangutan,pig, antisense antisense A549@0.121529,AG04450@0,BJ@0.0217975,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0.022305,NHLF@0,SKNSHRA@0.015141, 0 0 0 0 ENSG00000237975.1 ENST00000382265.3 chr1:152221479-152243570 3 1791 20296 intergenic -0.87 0 0,0,0 0 0,0,0 0 0 0 0 0.339968466692944 0 0 0.99182104848246 7.781 0 0 human, lincRNA processed_transcript A549@0.864648,AG04450@0.002561,BJ@0.354683,GM12878@0.004465,H1HESC@0,HELAS3@0.0146285,HEPG2@0.023741,HMEC@0.054271,HSMM@0.101223,HUVEC@0.170671,K562@0,MCF7@0.0095875,NHEK@0.642003,NHLF@0.178566,SKNSHRA@0.180772, 0 0 0 0 ENSG00000237975.1 ENST00000392688.2 chr1:152285935-152338051 7 2988 49116 exonic 8.69 1 0,0,0 0 0,0,0 0 10.7562708689633 0 9.28279785809906 14.700464207183 0 10.4581659973226 15.8541004967831 0 0 0 human,orangutan, lincRNA processed_transcript A549@0.864648,AG04450@0.002561,BJ@0.354683,GM12878@0.004465,H1HESC@0,HELAS3@0.0146285,HEPG2@0.023741,HMEC@0.054271,HSMM@0.101223,HUVEC@0.170671,K562@0,MCF7@0.0095875,NHEK@0.642003,NHLF@0.178566,SKNSHRA@0.180772, 0 0 0 0 ENSG00000237975.1 ENST00000445097.1 chr1:152309544-152339163 3 2849 26766 encompassing -0.64 1 0,0,0 0 0,0,0 0 8.24871105133378 0 3.87223587223587 17.7022341776881 0 5.06107406107406 17.9289396996189 0 0 0 chimp,elephant,human,macaque,marmoset,orangutan,pig, lincRNA processed_transcript A549@0.864648,AG04450@0.002561,BJ@0.354683,GM12878@0.004465,H1HESC@0,HELAS3@0.0146285,HEPG2@0.023741,HMEC@0.054271,HSMM@0.101223,HUVEC@0.170671,K562@0,MCF7@0.0095875,NHEK@0.642003,NHLF@0.178566,SKNSHRA@0.180772, 0 0 0 0 ENSG00000227415.1 ENST00000411804.1 chr1:152346430-152417932 2 705 70795 encompassing 0.51 1 0,0,0 0 0,0,0 0 0.904470654707253 0 5.90354609929078 5.10543117451797 0 11.6241134751773 7.29003460696377 1.458 0 0 cat,chimp,cow,dog,elephant,horse,human,macaque,marmoset,orangutan,panda,pig,rabbit, processed_transcript processed_transcript A549@0.0033725,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0.003124,NHEK@0.014129,NHLF@0.005852,SKNSHRA@0, 0 0 0 0 ENSG00000176075.6 ENST00000536536.1 chr1:152627953-152629266 3 288 1021 intergenic -10.05 1 1,1,1 0 0,0,0 0 0 0 16.21875 9.7384916748286 0 17.5243055555556 13.3790401567091 0 0 0 cat,chimp,horse,human,macaque,marmoset,orangutan,panda,pig, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0.004227,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000176075.6 ENST00000444515.1 chr1:152627953-152629280 3 299 1024 intergenic -10.05 1 1,1,1 0 0,0,0 0 0 0 15.6220735785953 9.7099609375 0 16.8795986622074 13.33984375 0 0 0 cat,chimp,horse,human,macaque,marmoset,orangutan,panda, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0.004227,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000224308.1 ENST00000419578.1 chr1:152902516-152921686 2 1995 17173 intergenic -4.93 0 0,1,0 0 0,0,0 20.5097744360902 3.83439119548128 0 4.74385964912281 11.4255517381937 3.679 13.3689223057644 13.0779712339137 3.895 0 0 chimp,dog,elephant,guinea_pig,horse,human,macaque,marmoset,mouse,opossum,orangutan,pig,rabbit,rat, antisense antisense A549@0,AG04450@0,BJ@0,GM12878@0.009357,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0.004101,HSMM@0,HUVEC@0,K562@0.0023255,MCF7@0.0020135,NHEK@0.0802317,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000229699.1 ENST00000427145.1 chr1:153146994-153164152 3 2251 14903 intergenic -1.55 1 0,0,0 0 0,0,0 4.00710795202132 0 0.44 0 0 0 0 0.977991008521774 9.685 0 0 chimp,horse,human,macaque,orangutan, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0.016349,HSMM@0,HUVEC@0,K562@0,MCF7@0.0027165,NHEK@0.0132667,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000238279.1 ENST00000420695.1 chr1:153506079-153507591 2 529 981 intronic -1.08 0 0,0,1 0 0,0,0 0 60.348623853211 0 0 43.8185524974516 1.673 0 46.7359836901121 2.673 0 0 chimp,elephant,human,macaque,marmoset,orangutan, antisense antisense A549@0.653513,AG04450@0.273575,BJ@0.207928,GM12878@0,H1HESC@0.601129,HELAS3@1.99521,HEPG2@0.693683,HMEC@0,HSMM@0.170512,HUVEC@0.024775,K562@0.0246315,MCF7@0.0227175,NHEK@0.042912,NHLF@0.0879285,SKNSHRA@0.024271, 0 0 0 0 ENSG00000233059.1 ENST00000446229.1 chr1:153615538-153618305 2 355 2410 exonic -6.36 0 0,1,1 0 0,0,0 138.878873239437 162.154771784232 17.733 200.10985915493 233.252697095436 40.334 252.622535211268 219.929875518672 41.934 0 0 cat,chimp,cow,dog,elephant,horse,human,macaque,marmoset,orangutan,panda,pig,rabbit,rat, antisense antisense A549@0.024321,AG04450@0.0062785,BJ@0,GM12878@0,H1HESC@0.0069315,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0.0137595,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000243613.1 ENST00000453778.1 chr1:153719327-153723703 2 233 4141 exonic 6.74 0 0,1,1 0 0,0,0 232.047210300429 54.0857280850036 33.198 337.592274678112 71.9444578604202 18.863 310.44635193133 71.345085728085 19.92 0 0 chimp,cow,elephant,guinea_pig,horse,human,macaque,mouse,orangutan,pig,rat, antisense antisense A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000233222.2 ENST00000434575.1 chr1:153723459-153724652 2 314 877 exonic 3.21 0 0,0,0 0 0,0,0 132.802547770701 23.5826681870011 105.565 183.573248407643 36.636259977195 94.963 146.917197452229 29.8563283922463 127.682 0 0 chimp,cow,dog,elephant,horse,human,macaque,marmoset,opossum,orangutan,panda,pig,rabbit,rat, antisense antisense A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0.009418,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000228013.1 ENST00000424435.1 chr1:154374804-154379040 2 1754 2480 intronic 4.95 0 0,0,1 0 0,0,0 17.6944127708096 20.8213709677419 11.715 5.21550741163056 29.9810483870968 23.789 18.1248574686431 28.2572580645161 25.377 0 0 chimp,human,orangutan, lincRNA processed_transcript A549@0.0660525,AG04450@0.0651905,BJ@0.018011,GM12878@0.062042,H1HESC@0.0165655,HELAS3@0.03819,HEPG2@0.0928535,HMEC@0.032645,HSMM@0.007536,HUVEC@0.0098585,K562@0.0030495,MCF7@0.03812,NHEK@0.0703707,NHLF@0.102683,SKNSHRA@0.0077565, 0 0 0 0 ENSG00000229780.1 ENST00000441613.1 chr1:154526085-154527493 2 430 976 exonic -0.64 0 0,0,1 0 0,0,0 82.4046511627907 0 133.555 90.8837209302326 0 156.131 109.279069767442 0 165.402 0 0 cat,chimp,cow,dog,elephant,guinea_pig,horse,human,macaque,marmoset,mouse,orangutan,pig,rat, antisense antisense A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0.0934205,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000233875.1 ENST00000421866.1 chr1:154551541-154552139 2 319 277 exonic 0 0 0,0,0 0 0,0,0 33.166144200627 0 11.16 0 0 4.59 0 0 4.913 0 0 chimp,cow,elephant,human,marmoset,orangutan, antisense antisense A549@0.992912,AG04450@0.422153,BJ@0.603055,GM12878@1.34166,H1HESC@0.86739,HELAS3@1.54404,HEPG2@1.81482,HMEC@0.012756,HSMM@0.211867,HUVEC@0.597882,K562@0.335932,MCF7@0.914815,NHEK@0.665929,NHLF@0.63765,SKNSHRA@0.926252, 0 0 0 0 ENSG00000232093.1 ENST00000452962.1 chr1:155017667-155018594 2 820 105 exonic -0.70 1 0,1,1 0 0,0,0 13.5365853658537 208.571428571429 53.625 26.0951219512195 270.685714285714 69.484 20.5317073170732 252.685714285714 77.461 0 0 chimp,elephant,horse,human,macaque,marmoset,orangutan,pig,rabbit, antisense antisense A549@2.72914,AG04450@0.169098,BJ@0.267453,GM12878@0.437901,H1HESC@1.90482,HELAS3@14.0411,HEPG2@2.61374,HMEC@1.78828,HSMM@0.430084,HUVEC@1.55614,K562@4.49793,MCF7@3.38437,NHEK@1.27316,NHLF@0.153922,SKNSHRA@0.904397, 0 0 0 0 ENSG00000231064.1 ENST00000447623.1 chr1:155166659-155170137 3 538 2936 exonic -4.69 0 0,0,1 0 0,0,0 192.507434944238 144.885899182561 372.563 205.098513011152 162.598433242507 258.853 219.667286245353 160.653610354223 270.424 0 0 chimp,cow,elephant,horse,human,macaque,marmoset,orangutan,rabbit, antisense antisense A549@1.16866,AG04450@0.282851,BJ@1.00289,GM12878@0.0610845,H1HESC@9.58892,HELAS3@4.18413,HEPG2@2.34618,HMEC@0.121361,HSMM@0.166853,HUVEC@0.593999,K562@0.544686,MCF7@0.331462,NHEK@0.186294,NHLF@0.60257,SKNSHRA@1.89508, 0 0 0 0 ENSG00000231064.1 ENST00000454348.1 chr1:155167951-155170066 2 561 1552 exonic -4.69 0 0,0,1 0 0,0,0 199.887700534759 69.6887886597938 227.544 243.27807486631 85.3144329896907 234.817 261.028520499109 85.7061855670103 234.635 0 0 cat,chimp,cow,dog,elephant,guinea_pig,horse,human,macaque,marmoset,mouse,orangutan,panda,pig,platypus,rabbit, antisense antisense A549@1.16866,AG04450@0.282851,BJ@1.00289,GM12878@0.0610845,H1HESC@9.58892,HELAS3@4.18413,HEPG2@2.34618,HMEC@0.121361,HSMM@0.166853,HUVEC@0.593999,K562@0.544686,MCF7@0.331462,NHEK@0.186294,NHLF@0.60257,SKNSHRA@1.89508, 0 0 0 0 ENSG00000231064.1 ENST00000436772.1 chr1:155168218-155170362 2 590 1552 exonic -4.69 1 0,0,1 0 0,0,0 240.242372881356 69.6887886597938 243.662 320.827118644068 85.3144329896907 237.343 332.523728813559 85.7061855670103 245.524 0 0 cat,chimp,cow,dog,elephant,guinea_pig,horse,human,macaque,marmoset,mouse,opossum,orangutan,panda,pig,rabbit, antisense antisense A549@1.16866,AG04450@0.282851,BJ@1.00289,GM12878@0.0610845,H1HESC@9.58892,HELAS3@4.18413,HEPG2@2.34618,HMEC@0.121361,HSMM@0.166853,HUVEC@0.593999,K562@0.544686,MCF7@0.331462,NHEK@0.186294,NHLF@0.60257,SKNSHRA@1.89508, 0 0 0 0 ENSG00000231064.1 ENST00000453136.1 chr1:155168375-155175286 5 907 5996 exonic -5.98 1 0,1,1 0 0,0,0 164.857772877619 112.389259506338 245.186 184.532524807056 125.130753835891 258.547 178.934950385888 123.724816544363 271.854 0 0 chimp,cow,elephant,horse,human,macaque,marmoset,rabbit, antisense antisense A549@1.16866,AG04450@0.282851,BJ@1.00289,GM12878@0.0610845,H1HESC@9.58892,HELAS3@4.18413,HEPG2@2.34618,HMEC@0.121361,HSMM@0.166853,HUVEC@0.593999,K562@0.544686,MCF7@0.331462,NHEK@0.186294,NHLF@0.60257,SKNSHRA@1.89508, 0 0 0 0 ENSG00000231064.1 ENST00000422665.1 chr1:155170029-155175097 3 470 4594 exonic 4.63 0 0,0,0 0 0,0,0 227.16170212766 129.418154114062 108.157 210.027659574468 143.472355245973 132.408 189.342553191489 141.9954288202 133.016 0 0 chimp,cow,elephant,horse,human,macaque,marmoset,rabbit, antisense antisense A549@1.16866,AG04450@0.282851,BJ@1.00289,GM12878@0.0610845,H1HESC@9.58892,HELAS3@4.18413,HEPG2@2.34618,HMEC@0.121361,HSMM@0.166853,HUVEC@0.593999,K562@0.544686,MCF7@0.331462,NHEK@0.186294,NHLF@0.60257,SKNSHRA@1.89508, 0 0 0 0 ENSG00000231064.1 ENST00000430312.1 chr1:155170593-155175158 6 839 3716 exonic 0.66 0 0,0,0 0 0,0,0 224.392133492253 111.149085037675 213.839 232.022646007151 123.732238966631 241.912 229.474374255066 119.545209903122 236.785 0 0 chimp,cow,dog,elephant,guinea_pig,horse,human,macaque,marmoset,orangutan,panda,pig,rabbit,rat, antisense antisense A549@1.16866,AG04450@0.282851,BJ@1.00289,GM12878@0.0610845,H1HESC@9.58892,HELAS3@4.18413,HEPG2@2.34618,HMEC@0.121361,HSMM@0.166853,HUVEC@0.593999,K562@0.544686,MCF7@0.331462,NHEK@0.186294,NHLF@0.60257,SKNSHRA@1.89508, 0 0 0 0 ENSG00000236263.1 ENST00000455788.1 chr1:155180942-155183610 2 566 2100 exonic -3.96 0 0,1,0 0 0,0,0 117.397526501767 199.932857142857 40.594 52.4911660777385 222.177142857143 107.183 53.6183745583039 204.174761904762 128.478 0 0 chimp,cow,elephant,guinea_pig,horse,human,macaque,marmoset,mouse,orangutan,pig,rabbit, antisense antisense A549@0.591879,AG04450@0.617595,BJ@0.634486,GM12878@0.227081,H1HESC@0.305839,HELAS3@1.20278,HEPG2@0.363752,HMEC@0.273936,HSMM@0.562256,HUVEC@0.710222,K562@0.314738,MCF7@1.02111,NHEK@0.41296,NHLF@0.447569,SKNSHRA@2.02229, 0 0 0 0 ENSG00000229691.1 ENST00000429648.1 chr1:155279829-155280381 2 299 251 exonic 0 0 0,0,1 0 0,0,0 281.377926421405 0 0 202.270903010033 0 0 207.782608695652 0 0 0 0 cat,chimp,cow,dog,elephant,guinea_pig,horse,human,macaque,marmoset,orangutan,panda,pig,rabbit,rat, antisense antisense A549@0.055131,AG04450@0.038207,BJ@0.134946,GM12878@0.0077875,H1HESC@0,HELAS3@0.0150135,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0.0135105,NHEK@0,NHLF@0,SKNSHRA@0.056217, 0 0 0 0 ENSG00000225855.2 ENST00000446880.1 chr1:155286654-155291335 4 1832 2843 exonic 9.34 0 0,1,1 0 0,0,1 27.028384279476 36.5511783327471 393.888 68.556768558952 75.2993316918748 289.686 81.6473799126638 94.5796693633486 289.032 0 0 chimp,human,macaque,marmoset, antisense antisense A549@0.657558,AG04450@0.291801,BJ@0.555265,GM12878@0.229393,H1HESC@0.315608,HELAS3@1.29714,HEPG2@0.663488,HMEC@0.0446,HSMM@0.101904,HUVEC@0.312343,K562@0.237555,MCF7@0.858776,NHEK@0.0755513,NHLF@0.132081,SKNSHRA@1.61564, 0 0 0 0 ENSG00000225855.2 ENST00000543656.1 chr1:155287224-155291318 2 1355 2737 exonic 8.72 0 0,0,1 0 0,0,1 46.0191881918819 33.4841066861527 393.888 75.0863468634686 85.7508220679576 293.421 94.6051660516605 105.204603580563 292.641 0 0 chimp,elephant,human,macaque,marmoset,orangutan, antisense antisense A549@0.657558,AG04450@0.291801,BJ@0.555265,GM12878@0.229393,H1HESC@0.315608,HELAS3@1.29714,HEPG2@0.663488,HMEC@0.0446,HSMM@0.101904,HUVEC@0.312343,K562@0.237555,MCF7@0.858776,NHEK@0.0755513,NHLF@0.132081,SKNSHRA@1.61564, 0 0 0 0 ENSG00000225855.2 ENST00000443642.1 chr1:155287737-155293959 6 673 5539 exonic 0.17 0 0,1,1 0 0,0,1 188.79940564636 216.764939519769 12.906 248.784546805349 184.701751218632 101.914 288.7147102526 178.679906120238 94.138 0 0 chimp,cow,dog,elephant,guinea_pig,horse,human,macaque,marmoset,mouse,opossum,orangutan,panda,pig,rabbit,rat, antisense antisense A549@0.657558,AG04450@0.291801,BJ@0.555265,GM12878@0.229393,H1HESC@0.315608,HELAS3@1.29714,HEPG2@0.663488,HMEC@0.0446,HSMM@0.101904,HUVEC@0.312343,K562@0.237555,MCF7@0.858776,NHEK@0.0755513,NHLF@0.132081,SKNSHRA@1.61564, 0 0 0 0 ENSG00000225855.2 ENST00000450199.1 chr1:155289950-155293967 2 1634 2381 exonic 5.04 1 0,1,1 0 0,0,1 6.18604651162791 490.113397732045 12.906 65.9186046511628 345.356992860143 105.57 77.6028151774786 309.842083158337 97.474 0 0 cat,chimp,cow,dog,elephant,horse,human,macaque,marmoset,mouse,orangutan,pig, antisense antisense A549@0.657558,AG04450@0.291801,BJ@0.555265,GM12878@0.229393,H1HESC@0.315608,HELAS3@1.29714,HEPG2@0.663488,HMEC@0.0446,HSMM@0.101904,HUVEC@0.312343,K562@0.237555,MCF7@0.858776,NHEK@0.0755513,NHLF@0.132081,SKNSHRA@1.61564, 0 0 0 0 ENSG00000227773.1 ENST00000458371.1 chr1:155365801-155366769 2 446 520 intronic 0 0 0,0,1 0 0,0,0 0 0 0 0 0 0 0 0 0 0 0 chimp,elephant,horse,human,macaque,marmoset,orangutan,pig, sense_intronic sense_intronic A549@0,AG04450@0.0213875,BJ@0,GM12878@0.016118,H1HESC@0.0066545,HELAS3@0,HEPG2@0.0048225,HMEC@0,HSMM@0,HUVEC@0,K562@0.029773,MCF7@0.0043905,NHEK@0.00367,NHLF@0.004571,SKNSHRA@0.005855, 0 0 0 0 ENSG00000235919.2 ENST00000456633.1 chr1:155531833-155533437 2 909 693 exonic 22.69 0 0,1,0 0 0,0,0 128.30803080308 90.3578643578644 73.612 92.5896589658966 247.493506493506 80.484 107.327832783278 312.128427128427 70.177 0 0 chimp,cow,dog,elephant,guinea_pig,horse,human,macaque,marmoset,mouse,opossum,orangutan,pig,rabbit,rat, lincRNA lincRNA A549@1.46216,AG04450@0.416296,BJ@0.64683,GM12878@3.25175,H1HESC@3.62416,HELAS3@3.08739,HEPG2@2.7429,HMEC@0.472814,HSMM@0.376058,HUVEC@0.671992,K562@6.11421,MCF7@2.57499,NHEK@0.631678,NHLF@0.398512,SKNSHRA@1.20263, 0 0 0 0 ENSG00000235919.2 ENST00000452809.1 chr1:155531864-155533735 2 907 962 exonic 6.76 1 1,1,1 0 0,0,0 112.253583241455 65.0914760914761 88.43 72.4321940463065 192.028066528067 83.017 86.4024255788313 240.505197505197 76.175 0 0 chimp,cow,horse,human,macaque,marmoset,mouse,orangutan,pig,rabbit,rat, lincRNA lincRNA A549@1.46216,AG04450@0.416296,BJ@0.64683,GM12878@3.25175,H1HESC@3.62416,HELAS3@3.08739,HEPG2@2.7429,HMEC@0.472814,HSMM@0.376058,HUVEC@0.671992,K562@6.11421,MCF7@2.57499,NHEK@0.631678,NHLF@0.398512,SKNSHRA@1.20263, 0 0 0 0 ENSG00000232519.1 ENST00000456382.1 chr1:155579339-155580171 2 446 384 exonic -8.33 0 0,0,0 0 0,0,0 0 0 0 65.4820627802691 46.40625 102.045 76.7264573991031 56.4166666666667 122.238 0 0 chimp,cow,elephant,horse,human,macaque,marmoset,orangutan,pig, antisense antisense A549@0.174941,AG04450@0.022968,BJ@0.0362415,GM12878@0.325513,H1HESC@0.141283,HELAS3@0.611137,HEPG2@0.465152,HMEC@0,HSMM@0.024946,HUVEC@0.066696,K562@0.409301,MCF7@0.0686785,NHEK@0.0538717,NHLF@0.039053,SKNSHRA@0.073045, 0 0 0 0 ENSG00000227673.1 ENST00000432858.1 chr1:155679889-155680354 2 155 308 intronic 0 0 0,0,0 0 0,0,0 0 0 0 0 0 0 0 0 0 0 0 chimp,human,macaque,marmoset,orangutan, antisense antisense A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000224276.1 ENST00000415726.1 chr1:155961181-155971578 2 399 9996 intergenic 0 1 0,0,0 0 0,0,0 0 6.76220488195278 0 11.7593984962406 6.9468787515006 41.034 9.29323308270677 8.0656262505002 40.441 0 0 chimp,dog,elephant,horse,human,macaque,orangutan, antisense antisense A549@0,AG04450@0,BJ@0.006035,GM12878@0.048517,H1HESC@0.0103465,HELAS3@0,HEPG2@0.054419,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0.005668, 0 0 0 0 ENSG00000227010.1 ENST00000454974.1 chr1:155966114-155972355 2 427 5812 intergenic -0.41 1 0,0,1 0 0,0,0 131.838407494145 3.89280798348245 25.334 81.152224824356 8.84325533379215 55.082 102.829039812646 9.08929800412939 47.514 0 0 cat,chimp,cow,dog,elephant,horse,human,macaque,marmoset,opossum,orangutan,panda,pig, processed_transcript processed_transcript A549@0.255833,AG04450@0,BJ@0,GM12878@0.0463195,H1HESC@0.00623,HELAS3@0.562146,HEPG2@0.313426,HMEC@0.035716,HSMM@0,HUVEC@0,K562@0.033467,MCF7@0,NHEK@0.0477667,NHLF@0,SKNSHRA@0.016098, 0 0 0 0 ENSG00000237390.1 ENST00000451362.1 chr1:156358018-156365401 2 5584 1797 intergenic 4.41 0 0,0,0 0 0,0,0 55.684276504298 83.0328324986088 52.65 71.9580945558739 45.9287701725097 91.641 74.4921203438395 45.6850306065665 96.173 0 0 chimp,human,macaque,orangutan, lincRNA processed_transcript A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0.044185,HELAS3@0.081108,HEPG2@0.183378,HMEC@0,HSMM@0,HUVEC@0.0010655,K562@0.001952,MCF7@0.003432,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000236947.1 ENST00000441085.1 chr1:156416204-156426258 4 519 9529 intergenic -7.63 0 0,1,1 0 0,0,0 0 0 18.224 0 0.702697030118585 16.11 0 0.733865043551265 16.267 0 0 chimp,horse,human,macaque,marmoset, lincRNA lincRNA A549@0.176173,AG04450@0.0068095,BJ@0.0084415,GM12878@0.01889,H1HESC@0.0850165,HELAS3@0.050618,HEPG2@0.0236155,HMEC@0,HSMM@0.003377,HUVEC@0,K562@0.01242,MCF7@0.070613,NHEK@0.001956,NHLF@0.025887,SKNSHRA@0.107248, 0 0 0 0 ENSG00000236947.1 ENST00000452465.1 chr1:156422689-156426369 3 672 3004 intergenic -6.33 0 0,1,1 0 0,0,0 0 0 38.064 0 2.22902796271638 34.816 0 2.32789613848202 35.02 0 0 chimp,horse,human,macaque,marmoset, lincRNA lincRNA A549@0.176173,AG04450@0.0068095,BJ@0.0084415,GM12878@0.01889,H1HESC@0.0850165,HELAS3@0.050618,HEPG2@0.0236155,HMEC@0,HSMM@0.003377,HUVEC@0,K562@0.01242,MCF7@0.070613,NHEK@0.001956,NHLF@0.025887,SKNSHRA@0.107248, 0 0 0 0 ENSG00000229953.1 ENST00000448869.1 chr1:156616299-156631216 2 756 14159 exonic 4.72 0 1,1,1 1 0,0,0 103.732804232804 57.5599971749417 33.03 196.011904761905 77.8600183628787 56.389 176.383597883598 69.4553287661558 61.251 0 0 cat,chimp,cow,dog,elephant,guinea_pig,horse,human,macaque,marmoset,mouse,opossum,orangutan,panda,pig,rabbit,rat, antisense antisense A549@5.49935,AG04450@0.0887375,BJ@0.248636,GM12878@1.59292,H1HESC@0.115029,HELAS3@19.0997,HEPG2@24.3616,HMEC@3.3424,HSMM@3.59292,HUVEC@2.23426,K562@14.0997,MCF7@2.50572,NHEK@0.0560187,NHLF@0.0358095,SKNSHRA@9.31691, 0 0 0 0 ENSG00000237588.1 ENST00000441272.1 chr1:156657489-156661789 2 4118 180 intergenic 0.74 0 0,0,0 0 0,0,0 7.84191355026712 0 59.995 12.243807673628 0 59.842 24.3062166100049 0 67.082 0 0 chimp,human,macaque,orangutan, lincRNA lincRNA A549@0,AG04450@0,BJ@0.0052105,GM12878@0,H1HESC@0.0355745,HELAS3@0.0023015,HEPG2@0.007945,HMEC@0,HSMM@0.0026045,HUVEC@0.0028895,K562@0.0047785,MCF7@0.0098485,NHEK@0.00128167,NHLF@0,SKNSHRA@0.053486, 0 0 0 0 ENSG00000223356.1 ENST00000428641.1 chr1:156682004-156682966 2 431 529 intergenic -3.50 0 0,0,0 0 0,0,0 0 0 0 0 14.069943289225 0 0 18.4007561436673 0 0 0 chimp,cow,human,macaque,marmoset,orangutan,panda,rabbit, antisense antisense A549@0.10117,AG04450@0.071529,BJ@0.0649605,GM12878@0.24228,H1HESC@0.179881,HELAS3@0.412004,HEPG2@0.172949,HMEC@0.78388,HSMM@0.0290245,HUVEC@0.0824775,K562@0.185929,MCF7@0.159867,NHEK@0.0599557,NHLF@0.182362,SKNSHRA@0.682241, 0 0 0 0 ENSG00000229961.1 ENST00000457239.1 chr1:157155178-157157195 2 469 1546 intergenic 2.15 1 0,0,1 0 0,0,0 0 0 0 0 0 5.66 0 0 9.051 0 0 chimp,human,macaque,orangutan, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0.207028,H1HESC@0.012619,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000228239.1 ENST00000449345.1 chr1:157202021-157206926 2 397 4506 intergenic 0 0 0,0,0 0 0,0,0 0 0 0 0 0 0 0 0 0 0 0 chimp,human,marmoset,orangutan, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 180 2 0 0 ENSG00000237189.1 ENST00000434098.1 chr1:157257493-157257843 2 154 194 intergenic 0 0 0,0,0 0 0,0,0 0 0 0 0 0 0 0 0 0 0 0 chimp,human,macaque,marmoset,orangutan, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000227217.1 ENST00000453692.1 chr1:157661552-157666249 2 756 3939 exonic 2.18 0 0,0,1 0 0,0,0 0 0 0 47.9021164021164 8.9022594567149 0 46.515873015873 9.15892358466616 0 0 0 chimp,cow,dog,elephant,horse,human,macaque,marmoset,mouse,orangutan,rabbit, antisense antisense A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000236957.2 ENST00000452528.1 chr1:157895764-157918861 4 1037 22054 intergenic 4.99 0 0,0,0 0 0,0,0 0 0 0 30.3847637415622 1.0014056407001 16.724 35.4088717454195 170.701460052598 24.27 0 0 chimp,elephant,guinea_pig,horse,human,orangutan,pig, processed_transcript processed_transcript A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0.005324,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000236957.2 ENST00000422062.1 chr1:157899321-157912986 2 792 12871 intergenic -0.25 0 0,1,0 0 0,0,0 0 0 0 30.0037878787879 1.41877088027348 0 43.9431818181818 237.107683940642 0 0 0 chimp,cow,dog,guinea_pig,horse,human,orangutan,panda,rabbit, processed_transcript processed_transcript A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0.005324,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000226520.1 ENST00000419415.1 chr1:157995340-158000956 2 585 5029 intronic -1.05 1 0,0,1 1 0,0,0 69.5692307692308 13.0405647245973 8.28 121.415384615385 25.560349970173 6.312 126.68547008547 30.1797574070392 0 0 0 cat,chimp,cow,elephant,guinea_pig,horse,human,macaque,marmoset,opossum,orangutan,panda,pig,rabbit, sense_intronic sense_intronic A549@0.550039,AG04450@0.560561,BJ@0.565186,GM12878@0,H1HESC@0.451906,HELAS3@0.209205,HEPG2@0.229196,HMEC@0.009767,HSMM@0.147017,HUVEC@1.1437,K562@0,MCF7@0,NHEK@0.348314,NHLF@0.389605,SKNSHRA@0.441178, 0 0 0 0 ENSG00000231666.1 ENST00000442358.1 chr1:158101834-158110420 4 645 7935 intergenic -2.34 1 0,0,1 0 0,0,0 0 0 0 0 2.06376811594203 0 0 2.10384373030876 0 0 0 chimp,horse,human,macaque,orangutan,rabbit, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0.513621,HSMM@0,HUVEC@0,K562@0,MCF7@0.0024655,NHEK@0.197274,NHLF@0,SKNSHRA@0.0027205, 0 0 0 0 ENSG00000231666.1 ENST00000414848.1 chr1:158101834-158110429 3 831 7760 intergenic 3.33 1 0,0,1 0 0,0,0 0 0 0 0 2.11030927835052 0 0 2.15128865979381 0 0 0 chimp,horse,human,macaque,marmoset,orangutan,rabbit, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0.513621,HSMM@0,HUVEC@0,K562@0,MCF7@0.0024655,NHEK@0.197274,NHLF@0,SKNSHRA@0.0027205, 0 0 0 0 ENSG00000176320.2 ENST00000415019.1 chr1:158167712-158173667 2 1997 3956 intergenic -1.90 0 0,0,0 0 0,0,0 0 0 0 0.124186279419129 1.75530839231547 3.679 0.129694541812719 13.7745197168857 3.835 0 0 chimp,human,macaque,orangutan,pig, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0.0058625,HMEC@0.004097,HSMM@0.0020585,HUVEC@0,K562@0,MCF7@0.0582195,NHEK@0,NHLF@0.003861,SKNSHRA@0, 0 0 0 0 ENSG00000236656.1 ENST00000419738.1 chr1:158444244-158464676 3 2594 17834 exonic 3.14 1 0,0,0 0 0,0,0 158.87933693138 15.4247504766177 0 76.893600616808 13.2103846585174 0 66.7829606784888 12.2175058876304 0 0 0 cat,chimp,elephant,guinea_pig,horse,human,macaque,marmoset,mouse,opossum,orangutan,pig,rabbit, antisense antisense A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0.00075,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000236656.1 ENST00000426251.1 chr1:158444246-158464507 3 425 19832 encompassing -5.91 1 0,1,0 0 0,0,0 0 34.6519766034691 0 0 21.937071399758 0 0 19.7217628075837 0 0 0 chimp,horse,human,macaque,orangutan,pig, antisense antisense A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0.00075,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000225670.1 ENST00000415675.1 chr1:159165775-159172177 4 3255 3141 exonic 2.58 1 0,0,0 0 0,0,0 118.535176651306 28.0967844635466 115.068 119.002457757296 43.829035339064 231.551 125.973886328725 44.3985991722381 233.45 0 0 chimp,guinea_pig,human,macaque,marmoset,orangutan,panda, antisense antisense A549@0,AG04450@0.0014455,BJ@0,GM12878@0.0033945,H1HESC@0.0006365,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0.0025725,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0.000696, 0 0 0 0 ENSG00000228560.1 ENST00000431862.1 chr1:159315956-159438858 4 1059 121837 encompassing 2.33 1 0,1,1 0 0,0,0 29.4900849858357 5.45914623636498 0 6.98300283286119 7.07668442263024 0 9.76015108593012 9.67083070003366 0 0 0 chimp,human,marmoset,orangutan, processed_transcript processed_transcript A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0.0457445,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000224943.1 ENST00000412932.1 chr1:159436111-159453166 3 850 16201 intergenic -1.89 0 0,1,0 0 0,0,0 0 13.093389296957 0 3.65529411764706 18.4676871798037 0 3.71647058823529 19.6122461576446 0 0 0 chimp,cow,guinea_pig,horse,human,macaque,marmoset,pig,rabbit, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000224259.1 ENST00000443364.1 chr1:159931008-159946902 3 801 15089 intergenic -1.80 0 1,1,1 0 0,0,0 0 2.07568427331168 0 0 1.72112134667639 0 0 2.50414209026443 0 0 0 chimp,human,macaque,marmoset, lincRNA lincRNA A549@0.110451,AG04450@0.161608,BJ@4.77201,GM12878@0,H1HESC@0,HELAS3@0.200254,HEPG2@0.040357,HMEC@0.611801,HSMM@0.529389,HUVEC@0,K562@0.0066495,MCF7@0,NHEK@9.2732,NHLF@1.46648,SKNSHRA@0.0086225, 0 0 0 0 ENSG00000224259.1 ENST00000423943.1 chr1:159931014-159948851 3 1110 16723 intergenic 1.87 1 1,1,1 0 0,0,0 0 1.87286970041261 0 0 1.5529510255337 0 0 2.39024098546911 0 0 0 chimp,human,macaque,marmoset,orangutan, lincRNA lincRNA A549@0.110451,AG04450@0.161608,BJ@4.77201,GM12878@0,H1HESC@0,HELAS3@0.200254,HEPG2@0.040357,HMEC@0.611801,HSMM@0.529389,HUVEC@0,K562@0.0066495,MCF7@0,NHEK@9.2732,NHLF@1.46648,SKNSHRA@0.0086225, 0 0 0 0 ENSG00000225279.1 ENST00000435580.1 chr1:160032278-160049611 5 640 16685 intronic 0.61 0 0,1,0 0 0,0,0 48.43125 36.0851663170512 198.381 11.509375 36.3889121965838 259.373 14.8875 32.2540605334132 243.689 0 0 chimp,cow,horse,human,macaque,marmoset,orangutan,panda,rabbit, antisense antisense A549@0,AG04450@0,BJ@0.127243,GM12878@0.0109025,H1HESC@0.01166,HELAS3@0,HEPG2@0.0202395,HMEC@0,HSMM@0.0137925,HUVEC@0,K562@0.0071995,MCF7@0,NHEK@0.044845,NHLF@0.030251,SKNSHRA@0.0212735, 0 0 0 0 ENSG00000227741.1 ENST00000418602.1 chr1:160171989-160178659 5 1573 5089 exonic 5.70 0 0,0,1 0 0,0,0 186.500317863954 179.656317547652 81.62 137.965034965035 50.009628610729 75.47 144.931977113795 50.1562192965219 77.079 0 0 chimp,cow,elephant,human,macaque,marmoset,mouse,orangutan,rabbit, lincRNA processed_transcript A549@0.083028,AG04450@0.0751715,BJ@0.119753,GM12878@0.0785975,H1HESC@0.142393,HELAS3@0.0342385,HEPG2@0.14256,HMEC@0.002595,HSMM@0.080767,HUVEC@0.283578,K562@0.0384265,MCF7@0.0410625,NHEK@0.0730207,NHLF@0.0258705,SKNSHRA@0.166955, 0 0 0 0 ENSG00000228606.1 ENST00000442130.1 chr1:160231534-160232568 2 555 477 exonic -5.43 1 1,1,1 0 0,0,0 182.457657657658 255.184486373166 205.208 276.643243243243 263.834381551363 137.508 259.144144144144 252.662473794549 134.439 0 0 cat,chimp,cow,elephant,guinea_pig,horse,human,macaque,marmoset,mouse,orangutan,panda,pig,rabbit,rat, antisense antisense A549@0.0649645,AG04450@0.176127,BJ@0.0493715,GM12878@0.14444,H1HESC@0.141437,HELAS3@0.253632,HEPG2@0.1219,HMEC@0.044107,HSMM@0.031545,HUVEC@0.150872,K562@0.136206,MCF7@0.047578,NHEK@0.042266,NHLF@0.111475,SKNSHRA@0.032629, 0 0 0 0 ENSG00000234425.1 ENST00000446952.1 chr1:160506863-160541248 2 633 33750 intronic -1.51 0 0,1,0 0 0,0,0 0 3.10405925925926 0 0 2.98708148148148 0 0 7.03801481481481 0 0 0 chimp,human,macaque,orangutan,panda, antisense antisense A549@0,AG04450@0,BJ@0,GM12878@0.0073825,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000228863.1 ENST00000443928.1 chr1:160643136-160653612 4 787 9683 exonic 0.02 0 0,0,0 0 0,0,0 0 0 26.784 0 2.21811422079934 33.213 0 3.89631312609728 46.953 0 0 chimp,human,macaque, antisense antisense A549@0,AG04450@0,BJ@0,GM12878@0.678674,H1HESC@0.264532,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000232188.1 ENST00000427339.1 chr1:160901529-160904170 2 573 2066 intergenic 2.37 0 0,0,0 0 0,0,0 0 0 0 0 0 0 0 0 0 0 0 NA lincRNA lincRNA A549@0.131711,AG04450@0,BJ@0,GM12878@0,H1HESC@0.0072155,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0.007929,HUVEC@0,K562@0,MCF7@0,NHEK@0.006888,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000198358.4 ENST00000356006.3 chr1:160902255-160919712 6 2130 15317 exonic 0.96 1 0,1,0 0 0,0,0 0 0 0 1.67605633802817 8.10328393288503 0 7.2887323943662 34.3899588692303 0 0 0 chimp,human,orangutan, processed_transcript processed_transcript A549@0,AG04450@0,BJ@0,GM12878@0.0035635,H1HESC@0,HELAS3@0.001954,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0.001636,K562@0,MCF7@0,NHEK@0.006093,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000228917.1 ENST00000447167.1 chr1:161054255-161057361 3 1106 1996 intronic -1.39 1 0,1,0 0 0,0,0 10.0632911392405 120.583166332665 447.612 59.8110307414105 115.385771543086 182.142 47.7848101265823 120.606713426854 164.448 0 0 chimp,cow,dog,elephant,guinea_pig,horse,human,macaque,marmoset,orangutan,panda,pig,rabbit, antisense antisense A549@0.087986,AG04450@0.0069495,BJ@0.017684,GM12878@0,H1HESC@0,HELAS3@0.095851,HEPG2@0.012767,HMEC@0.007384,HSMM@0.0608645,HUVEC@0,K562@0.0022145,MCF7@0.024024,NHEK@0.0119047,NHLF@0.00174,SKNSHRA@0.0147825, 0 0 0 0 ENSG00000224985.1 ENST00000420498.1 chr1:161123550-161129139 2 377 5210 exonic 8.43 1 1,1,1 0 0,0,0 86.2652519893899 41.0034548944338 255.712 162.135278514589 66.2909788867562 195.867 155.397877984085 69.4523992322457 186.151 0 0 cat,chimp,cow,elephant,horse,human,macaque,marmoset,mouse,orangutan,panda,pig,rabbit,rat, antisense antisense A549@0.549694,AG04450@0.143628,BJ@0.294725,GM12878@0.632899,H1HESC@0.281303,HELAS3@1.66052,HEPG2@0.80476,HMEC@0.129645,HSMM@0.0060145,HUVEC@0.0965205,K562@0.763492,MCF7@0.328485,NHEK@0.251403,NHLF@0.010182,SKNSHRA@0.467766, 0 0 0 0 ENSG00000235477.1 ENST00000437833.1 chr1:161337812-161341754 2 1804 2136 intergenic -1.63 0 0,1,0 0 0,0,0 0 5.97378277153558 89.794 2.87084257206208 0 29.559 2.95066518847007 0 29.114 0 0 chimp,human,macaque,marmoset,orangutan, antisense antisense A549@0.54415,AG04450@0.528346,BJ@0.29872,GM12878@0.486434,H1HESC@0.412141,HELAS3@0.918787,HEPG2@0.562461,HMEC@0.519287,HSMM@0.333598,HUVEC@0.269875,K562@0.753778,MCF7@0.320194,NHEK@0.458169,NHLF@0.285825,SKNSHRA@0.911898, 0 0 0 0 ENSG00000224515.1 ENST00000419446.1 chr1:161526080-161526868 2 460 326 intronic 2.34 0 0,0,0 0 0,0,0 0 0 0 0 0 0 0 0 0 0 0 chimp,human,macaque,marmoset,orangutan,rabbit, antisense antisense A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0.0197525,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 164 2 107 2 ENSG00000231813.1 ENST00000449604.1 chr1:161607438-161608218 2 460 318 intronic 4.06 0 0,0,0 0 0,0,0 0 0 0 0 0 0 0 0 0 0 0 chimp,human,macaque,marmoset,orangutan,rabbit, antisense antisense A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 164 2 107 2 ENSG00000234211.1 ENST00000453111.1 chr1:161641768-161644614 3 391 2451 intronic -5.92 0 0,0,0 0 0,0,0 0 5.36311709506324 12.76 0 15.7788657690738 41.891 0 19.2411260709914 29.713 0 0 chimp,human,macaque,marmoset,orangutan, antisense antisense A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0.0057685, 0 0 0 0 ENSG00000226889.1 ENST00000424663.1 chr1:161732646-161736000 4 777 2571 intergenic -2.17 0 0,0,0 0 0,0,0 6.80823680823681 12.0147802411513 17.925 4.26640926640927 12.6841695838195 28.176 4.93564993564994 13.9766627771295 29.774 0 0 chimp,human,macaque,marmoset,orangutan, antisense antisense A549@0.0027795,AG04450@0.0057395,BJ@0.006251,GM12878@0.196923,H1HESC@0.002656,HELAS3@0.0907375,HEPG2@0.027396,HMEC@0,HSMM@0.005269,HUVEC@0,K562@0.0747455,MCF7@0.0025745,NHEK@0.00953167,NHLF@0.0024705,SKNSHRA@0.01467, 0 0 0 0 ENSG00000226889.1 ENST00000431097.1 chr1:161735115-161735766 2 322 327 intergenic 0 0 0,0,0 0 0,0,0 16.4285714285714 37.2782874617737 17.925 16.1645962732919 0 28.176 17.2018633540373 6.68807339449541 29.774 0 0 cat,chimp,cow,elephant,guinea_pig,horse,human,macaque,marmoset,mouse,orangutan,pig,rabbit,rat, antisense antisense A549@0.0027795,AG04450@0.0057395,BJ@0.006251,GM12878@0.196923,H1HESC@0.002656,HELAS3@0.0907375,HEPG2@0.027396,HMEC@0,HSMM@0.005269,HUVEC@0,K562@0.0747455,MCF7@0.0025745,NHEK@0.00953167,NHLF@0.0024705,SKNSHRA@0.01467, 0 0 0 0 ENSG00000227818.1 ENST00000430905.1 chr1:162008806-162009357 2 451 98 intergenic 2.39 0 0,1,0 0 0,0,0 0 0 0 6.59866962305987 0 0 7.0509977827051 0 0 0 0 chimp,elephant,horse,human,macaque,orangutan,pig,rabbit, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000227094.1 ENST00000447899.1 chr1:162286642-162287584 2 515 425 intronic 9.46 0 0,0,0 0 0,0,0 0 0 0 0 21.6329411764706 0 0 25.2941176470588 0 0 0 chimp,cow,elephant,horse,human,macaque,marmoset,orangutan,panda,rabbit, antisense antisense A549@0.010685,AG04450@0,BJ@0.009524,GM12878@0,H1HESC@0,HELAS3@0.0090415,HEPG2@0,HMEC@0.261359,HSMM@0.904648,HUVEC@0,K562@0.0238305,MCF7@0,NHEK@0.166261,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000232892.1 ENST00000415437.1 chr1:163131465-163182813 4 2629 48713 intronic 3.59 0 0,0,0 0 0,0,0 34.2426778242678 6.1793976967134 0 15.8782807151008 6.08543920514031 0 14.7078737162419 7.32693531500831 0 0 0 chimp,cow,dog,horse,human,macaque,marmoset,orangutan, antisense antisense A549@0.0051235,AG04450@0,BJ@0.00187,GM12878@0,H1HESC@0.0145765,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0.0016475,HUVEC@0,K562@0,MCF7@0,NHEK@0.000484667,NHLF@0.0058955,SKNSHRA@0.0376065, 0 0 0 0 ENSG00000232995.2 ENST00000451759.1 chr1:163214295-163278367 4 831 63235 intronic -3.76 1 0,0,1 0 0,0,0 0 4.73481458053293 0 17.6678700361011 2.98682691547402 0 18.5631768953069 4.29611765636119 0 0 0 cat,chimp,cow,dog,guinea_pig,horse,human,macaque,marmoset,orangutan,pig,rabbit, processed_transcript processed_transcript A549@2.59816,AG04450@2.08316,BJ@1.58156,GM12878@5.16892,H1HESC@2.54725,HELAS3@4.58586,HEPG2@1.25555,HMEC@0.195961,HSMM@1.26497,HUVEC@2.23797,K562@6.07273,MCF7@0.580068,NHEK@1.36249,NHLF@3.59343,SKNSHRA@5.50797, 0 0 0 0 ENSG00000232995.2 ENST00000449680.1 chr1:163218065-163291582 4 784 72727 intronic -7.38 0 0,1,1 1 0,0,0 0 4.30745115294182 8.14 33.3137755102041 2.24600217250815 12.483 33.9783163265306 3.45636421136579 12.676 0 0 cat,chimp,cow,dog,elephant,horse,human,macaque,marmoset,orangutan,panda,pig,rat, processed_transcript processed_transcript A549@2.59816,AG04450@2.08316,BJ@1.58156,GM12878@5.16892,H1HESC@2.54725,HELAS3@4.58586,HEPG2@1.25555,HMEC@0.195961,HSMM@1.26497,HUVEC@2.23797,K562@6.07273,MCF7@0.580068,NHEK@1.36249,NHLF@3.59343,SKNSHRA@5.50797, 0 0 0 0 ENSG00000232995.2 ENST00000427213.1 chr1:163218109-163291542 3 613 72816 intronic -7.38 0 0,1,1 1 0,0,0 0 4.30218633267414 8.14 29.4339314845024 2.24325697648868 12.483 29.6704730831974 3.45213963963964 12.676 0 0 chimp,dog,elephant,horse,human,macaque,marmoset,orangutan,panda,pig,rabbit, processed_transcript processed_transcript A549@2.59816,AG04450@2.08316,BJ@1.58156,GM12878@5.16892,H1HESC@2.54725,HELAS3@4.58586,HEPG2@1.25555,HMEC@0.195961,HSMM@1.26497,HUVEC@2.23797,K562@6.07273,MCF7@0.580068,NHEK@1.36249,NHLF@3.59343,SKNSHRA@5.50797, 0 0 0 0 ENSG00000237756.1 ENST00000416401.1 chr1:163229640-163230449 2 467 340 intergenic -11.09 0 0,0,0 0 0,0,0 0 0 0 0 12.1764705882353 0 3.6423982869379 12.75 0 0 0 chimp,cow,elephant,horse,human,macaque,orangutan, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000232995.2 ENST00000429865.1 chr1:163270186-163291684 4 750 20742 exonic 0.61 0 0,1,0 1 0,0,0 10.6773333333333 4.09034808600906 8.14 15.7813333333333 1.14140391476232 9.809 30.2546666666667 2.80811879278758 9.915 0 0 chimp,cow,dog,horse,human,macaque,marmoset,orangutan,pig,rabbit, processed_transcript processed_transcript A549@2.59816,AG04450@2.08316,BJ@1.58156,GM12878@5.16892,H1HESC@2.54725,HELAS3@4.58586,HEPG2@1.25555,HMEC@0.195961,HSMM@1.26497,HUVEC@2.23797,K562@6.07273,MCF7@0.580068,NHEK@1.36249,NHLF@3.59343,SKNSHRA@5.50797, 0 0 0 0 ENSG00000232995.2 ENST00000528019.1 chr1:163270348-163291494 5 507 20631 intronic -0.85 0 0,1,0 1 0,0,0 15.7948717948718 4.11235519364064 8.14 18.0710059171598 1.14754495661868 12.483 39.3096646942801 2.82322718239542 12.676 0 0 chimp,cow,dog,guinea_pig,horse,human,macaque,marmoset,orangutan,rabbit, processed_transcript processed_transcript A549@2.59816,AG04450@2.08316,BJ@1.58156,GM12878@5.16892,H1HESC@2.54725,HELAS3@4.58586,HEPG2@1.25555,HMEC@0.195961,HSMM@1.26497,HUVEC@2.23797,K562@6.07273,MCF7@0.580068,NHEK@1.36249,NHLF@3.59343,SKNSHRA@5.50797, 0 0 0 0 ENSG00000232995.2 ENST00000528689.1 chr1:163270453-163291542 6 560 20519 intronic -0.85 0 0,1,0 1 0,0,0 14.3 4.13480189093036 8.14 16.3607142857143 1.15380866513963 12.483 35.5892857142857 2.83863736049515 12.676 1 1 chimp,human,macaque,marmoset,orangutan, processed_transcript processed_transcript A549@2.59816,AG04450@2.08316,BJ@1.58156,GM12878@5.16892,H1HESC@2.54725,HELAS3@4.58586,HEPG2@1.25555,HMEC@0.195961,HSMM@1.26497,HUVEC@2.23797,K562@6.07273,MCF7@0.580068,NHEK@1.36249,NHLF@3.59343,SKNSHRA@5.50797, 0 0 0 0 ENSG00000232995.2 ENST00000439699.1 chr1:163274001-163291542 4 1437 16098 intronic 2.37 1 1,1,1 1 0,0,0 0 0.861100757858119 8.14 8.15031315240083 0.93570629891912 12.483 10.4161447459986 1.28084234066344 12.676 0 0 cat,chimp,cow,horse,human,marmoset,orangutan,rabbit, processed_transcript processed_transcript A549@2.59816,AG04450@2.08316,BJ@1.58156,GM12878@5.16892,H1HESC@2.54725,HELAS3@4.58586,HEPG2@1.25555,HMEC@0.195961,HSMM@1.26497,HUVEC@2.23797,K562@6.07273,MCF7@0.580068,NHEK@1.36249,NHLF@3.59343,SKNSHRA@5.50797, 0 0 0 0 ENSG00000232995.2 ENST00000528818.1 chr1:163288628-163291531 2 572 2329 intronic -0.85 0 0,1,1 1 0,0,0 0 0 8.14 0 0 12.483 0 0 12.676 1 1 chimp,human,macaque,marmoset,orangutan, processed_transcript processed_transcript A549@2.59816,AG04450@2.08316,BJ@1.58156,GM12878@5.16892,H1HESC@2.54725,HELAS3@4.58586,HEPG2@1.25555,HMEC@0.195961,HSMM@1.26497,HUVEC@2.23797,K562@6.07273,MCF7@0.580068,NHEK@1.36249,NHLF@3.59343,SKNSHRA@5.50797, 0 0 0 0 ENSG00000232995.2 ENST00000526176.1 chr1:163289017-163291564 2 572 1973 intronic 0 0 1,1,1 1 0,0,0 0 0 8.14 0 0 12.483 0 0 12.676 1 1 chimp,human,macaque,marmoset,orangutan, processed_transcript processed_transcript A549@2.59816,AG04450@2.08316,BJ@1.58156,GM12878@5.16892,H1HESC@2.54725,HELAS3@4.58586,HEPG2@1.25555,HMEC@0.195961,HSMM@1.26497,HUVEC@2.23797,K562@6.07273,MCF7@0.580068,NHEK@1.36249,NHLF@3.59343,SKNSHRA@5.50797, 0 0 0 0 ENSG00000233693.1 ENST00000421530.1 chr1:164738353-164743878 4 1959 3560 intronic 4.34 0 0,0,1 0 0,0,0 50.7197549770291 72.8747191011236 91.18 30.698315467075 64.3974719101124 131.887 37.9933639612047 61.3707865168539 140.248 0 0 chimp,cow,dog,horse,human,macaque,marmoset,orangutan,panda, antisense antisense A549@0.0065985,AG04450@0.0022835,BJ@0,GM12878@0,H1HESC@0.003028,HELAS3@0.02563,HEPG2@0.022233,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0.009813,NHEK@0.001342,NHLF@0.003976,SKNSHRA@0.002833, 0 0 0 0 ENSG00000224702.1 ENST00000457106.1 chr1:165179864-165182327 3 689 1770 exonic -0.44 0 0,0,0 0 0,0,0 37.489114658926 14.083615819209 0 59.7489114658926 12.8734463276836 0 59.2844702467344 13.0225988700565 0 0 0 cat,chimp,cow,horse,human,macaque,marmoset,orangutan,panda,pig, antisense antisense A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000238022.1 ENST00000441773.1 chr1:165185217-165188341 2 672 2450 intronic 0.99 1 0,0,0 0 0,0,0 239.907738095238 6.6334693877551 0 164.941964285714 0 0 203.409226190476 0 0 0 0 cat,chimp,cow,dog,elephant,guinea_pig,horse,human,macaque,marmoset,orangutan,panda,pig,rabbit, antisense antisense A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0.0139345,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000238022.1 ENST00000426178.1 chr1:165187652-165188284 2 535 95 intronic 0.99 1 0,0,0 0 0,0,0 243.702803738318 0 0 200.448598130841 0 0 233.65046728972 0 0 0 0 cat,chimp,cow,dog,elephant,guinea_pig,horse,human,macaque,marmoset,orangutan,panda,pig,rabbit, antisense antisense A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0.0139345,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000237463.1 ENST00000416424.1 chr1:165446078-165551392 6 1711 103593 encompassing 4.95 1 0,0,1 0 0,0,0 0 18.3276572741401 0 2.09526592635885 13.5574894056548 0 252.796610169492 16.9424092361453 297.712 0 0 chimp,human,orangutan, antisense antisense A549@0.001151,AG04450@0,BJ@0,GM12878@0,H1HESC@0.001441,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0.0028015,MCF7@0.0192485,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000237463.1 ENST00000421273.1 chr1:165446079-165551341 7 1745 103505 encompassing 4.95 1 0,0,1 0 0,0,0 0 18.3432394570311 0 2.05444126074499 13.5690159895657 0 224.226934097421 16.9568136804985 338.971 0 0 chimp,human,orangutan, antisense antisense A549@0.001151,AG04450@0,BJ@0,GM12878@0,H1HESC@0.001441,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0.0028015,MCF7@0.0192485,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000237463.1 ENST00000438275.1 chr1:165458812-165551365 8 2392 90147 encompassing 4.95 1 0,0,1 0 0,0,0 4.29765886287625 19.1632222924779 0 1.91346153846154 14.9113337104951 0 172.533444816054 18.3901960131785 319.555 0 0 chimp,human,macaque,orangutan,pig, antisense antisense A549@0.001151,AG04450@0,BJ@0,GM12878@0,H1HESC@0.001441,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0.0028015,MCF7@0.0192485,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000237463.1 ENST00000452283.1 chr1:165462198-165508849 6 967 45674 intergenic 3.31 1 0,0,1 0 0,0,0 0 19.2955729736831 0 3.70734229576008 13.6437579366817 8.415 7.66287487073423 18.7635197267592 11.476 0 0 chimp,cow,horse,human,macaque,orangutan,panda,pig,rabbit, antisense antisense A549@0.001151,AG04450@0,BJ@0,GM12878@0,H1HESC@0.001441,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0.0028015,MCF7@0.0192485,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000237463.1 ENST00000418925.1 chr1:165462310-165470907 2 369 8226 intergenic 3.31 1 0,0,0 0 0,0,0 0 10.4023826890348 0 9.71544715447154 12.3563092633115 0 20.0813008130081 41.4130804765378 0 0 0 chimp,horse,human,macaque,orangutan, antisense antisense A549@0.001151,AG04450@0,BJ@0,GM12878@0,H1HESC@0.001441,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0.0028015,MCF7@0.0192485,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000237463.1 ENST00000415000.1 chr1:165468249-165496895 3 365 28277 intergenic -0.69 0 0,1,0 0 0,0,0 28.3178082191781 17.9904869682074 36.907 18.3342465753425 11.4867560207943 15.823 25.041095890411 11.5057467199491 17.822 0 0 cat,chimp,cow,dog,horse,human,macaque,marmoset,orangutan,panda,pig,rabbit, antisense antisense A549@0.001151,AG04450@0,BJ@0,GM12878@0,H1HESC@0.001441,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0.0028015,MCF7@0.0192485,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000237463.1 ENST00000454251.1 chr1:165494402-165498121 3 284 3431 intergenic 6.46 0 0,1,0 0 0,0,0 314.080985915493 57.6211017196153 0 26.3239436619718 44.6006995045176 0 26.25 46.6508306616147 0 0 0 cat,chimp,human,macaque,marmoset,mouse,orangutan,rabbit, antisense antisense A549@0.001151,AG04450@0,BJ@0,GM12878@0,H1HESC@0.001441,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0.0028015,MCF7@0.0192485,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000236206.1 ENST00000452618.1 chr1:165567700-165592568 4 488 24374 intergenic 4.90 0 0,0,0 1 0,0,0 0 0 0 0 1.22363994420284 0 0 5.3839336998441 0 0 0 chimp,human,macaque,marmoset,orangutan, lincRNA lincRNA A549@0.011267,AG04450@0,BJ@0,GM12878@0.107273,H1HESC@0.0120805,HELAS3@0.008484,HEPG2@0,HMEC@0.792862,HSMM@0,HUVEC@0.147822,K562@0.0538125,MCF7@0,NHEK@0.005278,NHLF@0.003922,SKNSHRA@0.094724, 0 0 0 0 ENSG00000215838.3 ENST00000400982.2 chr1:165667987-165679205 4 1212 10000 exonic 4.33 1 0,1,0 0 0,0,0 0 0 18.942 11.9925742574257 1.9415 44.358 13.0742574257426 3.4445 50.416 0 0 chimp,human,macaque,marmoset,orangutan, processed_transcript processed_transcript A549@0.0371365,AG04450@0,BJ@0.0020245,GM12878@0.004387,H1HESC@0.020568,HELAS3@0.039313,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0.0019995,K562@0.007969,MCF7@0.0033445,NHEK@0,NHLF@0.003209,SKNSHRA@0.0060875, 0 0 0 0 ENSG00000224358.1 ENST00000423121.1 chr1:165738166-165744413 2 2148 4097 exonic 5.61 0 0,1,0 1 0,0,0 0 0 85.528 1.25698324022346 0.758359775445448 91.324 1.25698324022346 0.796436416890408 110.692 0 0 chimp,human,macaque,marmoset,orangutan, lincRNA processed_transcript A549@0.36165,AG04450@0.257173,BJ@0.174393,GM12878@0.504239,H1HESC@0.319951,HELAS3@0.628504,HEPG2@0.448246,HMEC@0.051421,HSMM@0.097711,HUVEC@0.296664,K562@0.596332,MCF7@0.395449,NHEK@0.139206,NHLF@0.235186,SKNSHRA@0.413512, 0 0 0 0 ENSG00000236364.1 ENST00000455257.1 chr1:165865116-165869592 2 345 4129 intronic 2.74 0 0,0,0 0 0,0,0 23.3333333333333 21.5906999273432 0 0 20.5049648825381 7.783 0 20.0612739162025 9.427 0 0 chimp,cow,horse,human,macaque,marmoset,orangutan,panda, antisense antisense A549@0,AG04450@0,BJ@0.007095,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0.00627,HMEC@0.0472,HSMM@0.095272,HUVEC@0.116315,K562@0.0066915,MCF7@0,NHEK@0,NHLF@0.011121,SKNSHRA@0, 0 0 0 0 ENSG00000203307.2 ENST00000366136.2 chr1:166050420-166056720 3 591 5705 intronic -0.50 0 0,0,0 0 0,0,0 0 4.39614373356705 21.62 0 0.293251533742331 40.988 0 1.1626643295355 43.231 0 0 chimp,human,macaque,orangutan, antisense antisense A549@0.014106,AG04450@0,BJ@0.016579,GM12878@0.0478575,H1HESC@0.0516935,HELAS3@0.007027,HEPG2@0.050596,HMEC@0,HSMM@0.0128255,HUVEC@0,K562@0.027961,MCF7@0,NHEK@0.017771,NHLF@0,SKNSHRA@0, 1 96 0 0 ENSG00000230898.1 ENST00000451784.1 chr1:166117019-166134332 2 482 16829 intronic -6.03 0 0,1,1 0 0,0,0 0 12.1922871234179 220.886 37.6410788381743 13.9702893814249 236.206 38.6058091286307 13.7273159427179 190.539 0 0 chimp,dog,human,macaque,marmoset,orangutan, sense_intronic sense_intronic A549@0.0061295,AG04450@0,BJ@0.006152,GM12878@0.070641,H1HESC@0.0739535,HELAS3@0.0081055,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0.012052,MCF7@0,NHEK@0.0147997,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000229588.1 ENST00000425271.1 chr1:166304121-166304999 3 420 454 intergenic -3.88 0 0,0,0 0 0,0,0 0 0 0 0 0 0 0 0 0 0 0 cat,chimp,dog,elephant,horse,human,macaque,marmoset,orangutan,panda,pig, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0.123199,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000225325.1 ENST00000448643.1 chr1:166356964-166421869 3 807 64094 intergenic 5.05 0 0,0,0 0 0,0,0 0 6.13068305925672 0 0 5.70824102100041 0 0 6.68210752956595 0 0 0 chimp,guinea_pig,horse,human,macaque,marmoset,orangutan,pig, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0.0024885,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0.0033055,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000234142.1 ENST00000426519.1 chr1:166445009-166459276 3 698 13565 intergenic 3.33 0 0,1,1 1 0,0,0 0 1.73682270549208 0 0 3.29067453004055 0 14.6446991404011 7.27246590490232 0 0 0 chimp,cow,elephant,horse,human,macaque,marmoset,orangutan, lincRNA lincRNA A549@0.006193,AG04450@0,BJ@0,GM12878@0.414432,H1HESC@0,HELAS3@0,HEPG2@0.0077825,HMEC@0,HSMM@0,HUVEC@0,K562@0.852742,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000237096.1 ENST00000414590.1 chr1:166864948-166877317 3 559 11806 intergenic 0 0 0,0,0 0 0,0,0 22.2325581395349 1.09986447569033 0 6.76207513416816 2.6101982043029 0 7.11270125223614 5.54887345417584 0 0 0 chimp,human,macaque,orangutan, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0.0035775,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000227907.1 ENST00000417644.1 chr1:167021788-167027779 2 450 5539 intronic -6.94 1 0,0,0 0 0,0,0 0 5.95865679725582 0 0 8.24769814045857 0 0 10.4811337786604 0 0 0 chimp,dog,horse,human,marmoset,panda,pig, antisense antisense A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000231605.1 ENST00000426709.1 chr1:167145154-167165026 5 966 18898 intergenic -0.31 0 0,0,1 0 0,0,0 0 1.08170176738279 168.734 0 0.733252195999577 84.917 0 1.40602180124881 85.668 0 0 chimp,guinea_pig,human,macaque,marmoset,orangutan, antisense antisense A549@0.002536,AG04450@0,BJ@0,GM12878@0.0078315,H1HESC@0,HELAS3@0.002513,HEPG2@0,HMEC@0.026691,HSMM@0.036992,HUVEC@0,K562@0.0049935,MCF7@0.0066325,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000231605.1 ENST00000428030.1 chr1:167145311-167164717 3 927 18475 intergenic -0.96 0 0,0,0 0 0,0,0 0 1.10646820027064 145.312 2.32038834951456 0.63361299052774 66.592 2.57281553398058 1.30912043301759 67.193 0 0 chimp,dog,horse,human,macaque,marmoset,orangutan,pig,rabbit, antisense antisense A549@0.002536,AG04450@0,BJ@0,GM12878@0.0078315,H1HESC@0,HELAS3@0.002513,HEPG2@0,HMEC@0.026691,HSMM@0.036992,HUVEC@0,K562@0.0049935,MCF7@0.0066325,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000231605.1 ENST00000457941.1 chr1:167145458-167164985 4 902 18619 intergenic -0.31 0 0,0,0 0 0,0,0 0 1.09791073634459 168.734 0 0.744239755088888 84.917 0 1.42709060636984 85.668 0 0 chimp,guinea_pig,horse,human,macaque,marmoset,mouse,orangutan,pig,rabbit, antisense antisense A549@0.002536,AG04450@0,BJ@0,GM12878@0.0078315,H1HESC@0,HELAS3@0.002513,HEPG2@0,HMEC@0.026691,HSMM@0.036992,HUVEC@0,K562@0.0049935,MCF7@0.0066325,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000231605.1 ENST00000446687.1 chr1:167145584-167165029 4 852 18587 intergenic -0.31 0 0,0,1 0 0,0,0 0 1.09980093613816 168.734 0 0.745521063108624 84.917 0 1.42954753322214 85.668 0 0 chimp,horse,human,marmoset,mouse,orangutan,rabbit, antisense antisense A549@0.002536,AG04450@0,BJ@0,GM12878@0.0078315,H1HESC@0,HELAS3@0.002513,HEPG2@0,HMEC@0.026691,HSMM@0.036992,HUVEC@0,K562@0.0049935,MCF7@0.0066325,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000233411.1 ENST00000417969.1 chr1:167426620-167427898 2 301 975 intronic -1.71 0 0,1,0 0 0,0,0 0 0 0 0 0 0 0 0 3.645 0 0 cat,chimp,dog,horse,human,macaque,marmoset,orangutan,panda,pig, sense_intronic sense_intronic A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000232194.1 ENST00000451545.1 chr1:167789644-167790462 2 716 100 intronic -3.17 0 0,1,1 0 0,0,0 0 0 66.049 0 0 44.71 0 0 138.595 0 0 chimp,human,macaque,marmoset,orangutan, antisense antisense A549@0.111082,AG04450@0.02201,BJ@0.100836,GM12878@0,H1HESC@0.0322355,HELAS3@0.144143,HEPG2@0.028855,HMEC@0.102651,HSMM@0.14048,HUVEC@0.16515,K562@0.463776,MCF7@0.005727,NHEK@0.249284,NHLF@0.048765,SKNSHRA@0.0552705, 0 0 0 0 ENSG00000228697.1 ENST00000441851.1 chr1:168370067-168391894 4 1797 20024 intergenic 6.72 0 0,1,0 0 0,0,0 0 8.76887734718338 0 0 4.0076408310028 0 0 4.35727127447064 0 0 0 chimp,human,marmoset, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0.002603,H1HESC@0,HELAS3@0,HEPG2@0.015454,HMEC@0,HSMM@0.020774,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000228697.1 ENST00000422548.1 chr1:168370721-168376512 3 386 5401 intergenic 6.72 0 0,0,0 0 0,0,0 0 16.306609887058 0 0 9.28865024995371 0 0 9.95519348268839 0 0 0 chimp,dog,elephant,guinea_pig,horse,human,macaque,marmoset,orangutan,pig,rabbit, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0.002603,H1HESC@0,HELAS3@0,HEPG2@0.015454,HMEC@0,HSMM@0.020774,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000237658.1 ENST00000422253.1 chr1:168433452-168464882 5 514 30908 intergenic -0.27 0 0,1,0 0 0,0,0 0 2.69363918726543 0 0 3.45683965316423 4.208 0 4.28908373236703 0 0 0 chimp,human,marmoset,orangutan, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0.0128845,H1HESC@0,HELAS3@0.0643405,HEPG2@0.257024,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000235736.1 ENST00000457405.1 chr1:168732603-168743728 2 416 10707 intergenic 1.64 1 0,0,1 0 0,0,0 0 9.37424115064911 0 6.12980769230769 3.23909591855795 0 6.37019230769231 3.74885588867096 0 0 0 chimp,human,macaque, lincRNA lincRNA A549@0.006608,AG04450@0,BJ@0,GM12878@0.0617965,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0.0108555, 0 0 0 0 ENSG00000225826.1 ENST00000420691.1 chr1:168756177-168762124 3 952 4991 intergenic 1.64 1 0,0,1 0 0,0,0 40.5357142857143 1.47465437788018 0 8.96848739495798 0.909837707874174 0 10.8235294117647 1.91103987176918 0 0 0 chimp,dog,horse,human,macaque,marmoset,orangutan,panda,pig, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0.032153,HELAS3@0.05254,HEPG2@0.0136695,HMEC@0,HSMM@0.165789,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000203601.3 ENST00000366408.3 chr1:168873143-169056243 5 1124 181968 intergenic -15.05 1 0,0,0 0 0,0,0 20.5516014234875 4.7651729974501 64.062 7.30338078291815 3.26352435593071 55.744 7.64679715302491 4.91641937043876 59.664 0 0 chimp,guinea_pig,human,macaque,marmoset,orangutan, antisense antisense A549@0,AG04450@0,BJ@0,GM12878@0.028463,H1HESC@0,HELAS3@0.0040715,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0.0047305,K562@0.0023715,MCF7@0.0258105,NHEK@0,NHLF@0,SKNSHRA@0.004926, 0 0 0 0 ENSG00000237707.1 ENST00000415637.1 chr1:169073362-169074145 2 566 215 intergenic 1.81 1 0,0,0 0 0,0,0 0 0 9.89 0 0 65.021 18.5159010600707 0 77.083 0 0 cat,chimp,dog,elephant,horse,human,macaque,marmoset,orangutan,pig,rabbit, antisense antisense A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0.0282935,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000235575.1 ENST00000432081.1 chr1:169279903-169291717 2 366 11446 intronic -3.17 0 0,1,0 0 0,0,0 0 0 42.955 18.1147540983607 5.56237987069719 68.865 19.3224043715847 7.23257033024637 66.19 0 0 chimp,dog,horse,human,marmoset,orangutan,panda, antisense antisense A549@0.0058985,AG04450@0,BJ@0,GM12878@0.007216,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000230704.1 ENST00000454271.1 chr1:169732070-169733789 2 675 1042 intergenic -3.18 0 0,0,0 0 0,0,0 0 0 0 0 14.7437619961612 0 0 15.2696737044146 0 0 0 cat,chimp,cow,dog,horse,human,macaque,marmoset,orangutan,panda, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0.0089765,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000232959.1 ENST00000440321.1 chr1:169993218-169993824 2 339 265 exonic -7.25 0 0,0,0 0 0,0,0 70.8849557522124 275.396226415094 0 91.6106194690265 332.045283018868 14.472 94.3008849557522 337.049056603774 25.83 0 0 chimp,cow,dog,elephant,guinea_pig,human,macaque,marmoset,mouse,opossum,orangutan,panda,pig,rabbit, antisense antisense A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000233985.1 ENST00000439184.1 chr1:170143544-170210428 4 756 66122 intergenic -0.65 0 0,0,0 0 0,0,0 0 19.2322222558301 0 15.0238095238095 24.7962554066725 0 7.05820105820106 28.031003296936 0 0 0 cat,chimp,cow,dog,elephant,guinea_pig,horse,human,macaque,marmoset,mouse,orangutan,panda,pig,rabbit,rat, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0.0114735,H1HESC@0.014906,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0.0119515, 0 0 0 0 ENSG00000224286.1 ENST00000440404.1 chr1:170240744-170248073 3 1454 5871 intergenic 4.01 1 0,0,0 0 0,0,0 254.577716643741 5.21614716402657 0 290.784044016506 8.11565321069664 0 236.094910591472 11.5881451200818 0 0 0 cat,chimp,cow,dog,elephant,guinea_pig,horse,human,macaque,marmoset,mouse,orangutan,panda,pig,rabbit,rat, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0.0193955,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0.005297,SKNSHRA@0, 0 0 0 0 ENSG00000224286.1 ENST00000451439.1 chr1:170240908-170253349 3 385 12052 intergenic 0 0 0,0,1 0 0,0,0 293.485714285714 16.6939926983073 500.772 278.301298701299 24.0586624626618 304.495 233.085714285714 20.8838367076004 264.88 0 0 cat,chimp,dog,elephant,guinea_pig,horse,human,macaque,marmoset,mouse,opossum,orangutan,panda,pig,rabbit, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0.0193955,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0.005297,SKNSHRA@0, 0 0 0 0 ENSG00000231407.1 ENST00000416416.1 chr1:170429594-170486847 2 2078 55173 intergenic 1.00 0 0,0,1 0 0,0,0 189.946102021174 19.3131241730557 166.973 189.801732435034 24.3868015152339 89.004 205.212223291627 25.8214162724521 97.066 0 0 chimp,dog,elephant,human,macaque,marmoset,orangutan,panda,rabbit, antisense antisense A549@0.0081665,AG04450@0.0512025,BJ@0.0928745,GM12878@0.921707,H1HESC@0.025334,HELAS3@0.032039,HEPG2@0.02483,HMEC@0.017081,HSMM@0.0498445,HUVEC@0.048653,K562@0.041333,MCF7@0.020968,NHEK@0.014689,NHLF@0.374991,SKNSHRA@0.054929, 0 0 0 0 ENSG00000231407.1 ENST00000446102.1 chr1:170430458-170463681 2 1361 31860 intergenic 1.00 0 0,0,1 0 0,0,0 128.006612784717 14.3682360326428 142.107 132.842027920647 18.3860640301318 184.314 194.747979426892 20.4122096672944 192.248 0 0 chimp,dog,elephant,human,macaque,marmoset,orangutan,panda,rabbit, antisense antisense A549@0.0081665,AG04450@0.0512025,BJ@0.0928745,GM12878@0.921707,H1HESC@0.025334,HELAS3@0.032039,HEPG2@0.02483,HMEC@0.017081,HSMM@0.0498445,HUVEC@0.048653,K562@0.041333,MCF7@0.020968,NHEK@0.014689,NHLF@0.374991,SKNSHRA@0.054929, 0 0 0 0 ENSG00000231407.1 ENST00000456083.1 chr1:170431350-170501788 3 518 69916 intronic -4.32 0 0,1,1 0 0,0,0 77.8552123552124 19.1533983637508 0 90.3513513513514 22.6333457291607 0 94.4787644787645 24.3181818181818 0 0 0 cat,chimp,cow,horse,human,marmoset,orangutan,panda,pig,rabbit, antisense antisense A549@0.0081665,AG04450@0.0512025,BJ@0.0928745,GM12878@0.921707,H1HESC@0.025334,HELAS3@0.032039,HEPG2@0.02483,HMEC@0.017081,HSMM@0.0498445,HUVEC@0.048653,K562@0.041333,MCF7@0.020968,NHEK@0.014689,NHLF@0.374991,SKNSHRA@0.054929, 0 0 0 0 ENSG00000231407.1 ENST00000421020.1 chr1:170479102-170501141 4 751 21282 intergenic -0.25 0 0,0,0 0 0,0,0 4.90013315579228 31.3605864110516 15.057 3.62316910785619 29.9517902452777 34.985 3.8375499334221 31.2067944742035 33.488 0 0 cat,chimp,dog,horse,human,macaque,marmoset,orangutan,panda,pig,rabbit, antisense antisense A549@0.0081665,AG04450@0.0512025,BJ@0.0928745,GM12878@0.921707,H1HESC@0.025334,HELAS3@0.032039,HEPG2@0.02483,HMEC@0.017081,HSMM@0.0498445,HUVEC@0.048653,K562@0.041333,MCF7@0.020968,NHEK@0.014689,NHLF@0.374991,SKNSHRA@0.054929, 0 0 0 0 ENSG00000225545.1 ENST00000426090.1 chr1:170556390-170557377 2 128 857 intergenic 0 0 0,0,0 0 0,0,0 0 0 0 0 0 15.54 14.4921875 265 15.399 0 0 chimp,human,macaque,marmoset,orangutan, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000235303.1 ENST00000413005.1 chr1:170567995-170616480 3 1920 46561 intergenic 5.85 0 0,0,1 0 0,0,0 7.34427083333333 11.5398939026224 0 8.73385416666667 10.7222997787848 0 7.36875 10.7458387921222 0 0 0 chimp,human,orangutan, lincRNA lincRNA A549@0.001614,AG04450@0,BJ@0.026048,GM12878@0.12433,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0.0027775,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000231424.1 ENST00000455124.1 chr1:171137243-171220933 3 497 83189 intronic 4.06 0 0,0,0 0 0,0,0 0 5.61776196372117 0 0 6.54171825601942 17.918 0 6.98699347269471 18.29 0 0 chimp,human,orangutan,rabbit, antisense antisense A549@0.0188725,AG04450@0.059584,BJ@0.178358,GM12878@0,H1HESC@0.09614,HELAS3@0,HEPG2@0,HMEC@0.024568,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0.046352,SKNSHRA@0, 0 0 0 0 ENSG00000225243.1 ENST00000422841.1 chr1:171168383-171193423 3 655 24381 exonic 2.34 0 1,1,1 0 0,0,0 63.0732824427481 8.9134982158238 0 113.268702290076 10.2146343464173 0 114.813740458015 10.6429596817194 0 0 0 chimp,dog,guinea_pig,human,opossum,orangutan, antisense antisense A549@0.0084615,AG04450@0.0088405,BJ@0.006569,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0.010032,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000225243.1 ENST00000445909.1 chr1:171168386-171196864 3 439 28035 exonic -0.27 1 0,0,1 0 0,0,0 94.1070615034169 7.75173889780631 0 169 8.88328874621009 0 171.305239179954 9.2557874085964 0 0 0 cat,chimp,cow,dog,elephant,guinea_pig,horse,human,macaque,marmoset,mouse,opossum,orangutan,panda,pig,platypus,rabbit,rat, antisense antisense A549@0.0084615,AG04450@0.0088405,BJ@0.006569,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0.010032,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000225243.1 ENST00000445290.1 chr1:171168386-171196927 2 405 28134 exonic -7.79 1 0,0,1 0 0,0,0 102.007407407407 7.72446150565153 0 133.612345679012 9.57773512476008 0 128.834567901235 10.0567285135423 0 0 0 cat,chimp,cow,elephant,guinea_pig,horse,human,macaque,marmoset,orangutan,pig,rat, antisense antisense A549@0.0084615,AG04450@0.0088405,BJ@0.006569,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0.010032,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000244531.1 ENST00000483518.1 chr1:171591383-171595732 3 364 3981 intergenic 2.33 0 0,0,1 0 0,0,0 0 0 0 31.8983516483516 1.72444109520221 3.198 35.9478021978022 1.76011052499372 3.228 0 0 chimp,cow,dog,elephant,horse,human,macaque,marmoset,orangutan,panda,rabbit, antisense antisense A549@0,AG04450@0,BJ@0,GM12878@0.034204,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000233540.1 ENST00000450800.1 chr1:171833327-171833827 2 394 104 intronic -4.21 0 0,0,1 0 0,0,0 239.771573604061 0 0 90.9847715736041 36.9230769230769 0 105.796954314721 35.6346153846154 0 0 0 cat,chimp,cow,dog,guinea_pig,horse,human,macaque,marmoset,mouse,opossum,orangutan,panda,pig,rabbit,rat, sense_intronic sense_intronic A549@0.0150645,AG04450@0.030214,BJ@0,GM12878@0.016244,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0.0204305,MCF7@0,NHEK@0.0135787,NHLF@0.0063955,SKNSHRA@0, 0 0 0 0 ENSG00000230630.1 ENST00000417354.1 chr1:172109461-172113934 4 564 3903 intronic 0 0 0,1,1 0 0,0,0 211.205673758865 74.3656161926723 293.304 349.950354609929 77.3013066871637 393.627 303.512411347518 86.9543940558545 445.652 0 0 chimp,cow,dog,elephant,guinea_pig,horse,human,macaque,marmoset,mouse,orangutan,panda,pig,rabbit,rat, antisense antisense A549@0,AG04450@1.0999,BJ@0.635868,GM12878@0.023605,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0.163299,HUVEC@0.199016,K562@0,MCF7@0,NHEK@0,NHLF@0.532075,SKNSHRA@1.59018, 0 0 0 0 ENSG00000224228.1 ENST00000432694.1 chr1:172745045-173033155 5 794 287308 encompassing 0.29 0 0,0,0 0 0,0,0 0 2.27201122140699 0 0 3.56821599120108 6.821 0 5.25164979742994 6.802 0 0 chimp,dog,elephant,human,macaque,marmoset,orangutan, antisense antisense A549@0,AG04450@0.008211,BJ@0.0201095,GM12878@0.0197145,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0.006852,SKNSHRA@0, 0 0 0 0 ENSG00000224000.1 ENST00000452366.1 chr1:172876040-172876824 2 656 126 intergenic -3.13 0 0,0,1 0 0,0,0 0 0 0 16.1844512195122 0 0 44.0564024390244 7.71428571428571 0 0 0 cat,chimp,elephant,horse,human,marmoset,orangutan,pig, lincRNA lincRNA A549@0,AG04450@0.020904,BJ@0.045768,GM12878@0.0080715,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0.0613875,HUVEC@0.0200925,K562@0,MCF7@0,NHEK@0.00794567,NHLF@0.0034095,SKNSHRA@0.0116235, 0 0 0 0 ENSG00000226375.1 ENST00000436974.1 chr1:173143439-173144642 2 688 513 intergenic -18.55 0 0,1,0 0 0,0,0 0 0 0 0 0 2.264 0 0 2.312 0 0 chimp,human,macaque,marmoset,orangutan, lincRNA lincRNA A549@0.004888,AG04450@0.29344,BJ@0.0869665,GM12878@0.183773,H1HESC@0.018934,HELAS3@0.0699305,HEPG2@0.0432975,HMEC@0,HSMM@0.024821,HUVEC@0.41928,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0.214031, 0 0 0 0 ENSG00000247291.1 ENST00000421168.2 chr1:173204199-173446294 3 5616 236475 intergenic 12.75 0 0,1,1 1 0,0,0 2.58012820512821 1.52107410931388 27.246 1.48985042735043 3.70584628396236 56.045 1.50160256410256 6.79371603763612 62.149 0 0 chimp,horse,human,macaque,marmoset,orangutan, lincRNA lincRNA A549@0.10383,AG04450@0.240279,BJ@0.383019,GM12878@0.291365,H1HESC@0.220068,HELAS3@0.191887,HEPG2@0.182958,HMEC@0.036797,HSMM@0.234703,HUVEC@0.130838,K562@0.170323,MCF7@0.0629255,NHEK@0.088401,NHLF@0.070421,SKNSHRA@0.262139, 0 0 0 0 ENSG00000203739.3 ENST00000367716.3 chr1:173386932-173430501 2 1813 41754 intergenic 3.71 1 0,0,1 0 0,0,0 18.2857142857143 1.33311778512238 0 12.953667953668 1.59900847822963 0 24.3601765030336 5.67334866120611 0 0 0 chimp,human, antisense antisense A549@0.291457,AG04450@0.591023,BJ@1.67868,GM12878@0.5558,H1HESC@1.92639,HELAS3@2.03199,HEPG2@1.23674,HMEC@0.093474,HSMM@0.640877,HUVEC@0.378548,K562@1.00413,MCF7@0.232779,NHEK@0.278729,NHLF@0.279548,SKNSHRA@1.06807, 0 0 0 0 ENSG00000203739.3 ENST00000437190.1 chr1:173387213-173411236 3 1013 23006 intergenic 5.95 0 0,0,0 0 0,0,0 32.7265547877591 0.478136138398679 0 23.1836130306022 1.71568286533948 0 43.5982230997039 5.24637051204034 0 0 0 chimp,human,macaque,marmoset,orangutan, antisense antisense A549@0.291457,AG04450@0.591023,BJ@1.67868,GM12878@0.5558,H1HESC@1.92639,HELAS3@2.03199,HEPG2@1.23674,HMEC@0.093474,HSMM@0.640877,HUVEC@0.378548,K562@1.00413,MCF7@0.232779,NHEK@0.278729,NHLF@0.279548,SKNSHRA@1.06807, 0 0 0 0 ENSG00000238272.1 ENST00000431459.1 chr1:173524390-173581911 3 674 56843 exonic -0.33 0 0,0,0 0 0,0,0 0 3.77592667522826 0 18.3946587537092 6.88197315412628 22.18 18.4747774480712 7.83473778653484 19.688 0 0 cat,chimp,cow,dog,elephant,guinea_pig,horse,human,macaque,marmoset,mouse,orangutan,panda,rabbit, antisense antisense A549@0.0498165,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0.0059395,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000232113.1 ENST00000417563.1 chr1:173604912-173606273 2 379 980 intronic 0 0 0,0,1 0 0,0,1 24.2744063324538 0 12.98 81.6992084432718 10.5234693877551 50.337 91.4960422163588 26.6244897959184 45.894 0 0 cat,chimp,cow,dog,elephant,horse,human,macaque,marmoset,mouse,orangutan,panda,pig,rabbit,rat, antisense antisense A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000231792.1 ENST00000416578.1 chr1:173831290-173833079 2 851 936 intergenic -11.09 1 0,0,0 0 0,0,0 0 0 0 0 0 0 0 0 0 0 0 chimp,human,macaque,marmoset,orangutan, lincRNA lincRNA A549@0.508674,AG04450@0.462729,BJ@0.360188,GM12878@0.796334,H1HESC@0.105209,HELAS3@0.54425,HEPG2@0.527781,HMEC@0.134884,HSMM@0.324665,HUVEC@0.486739,K562@0.217651,MCF7@0.301283,NHEK@0.152222,NHLF@0.418865,SKNSHRA@0.660388, 0 0 0 0 ENSG00000234741.2 ENST00000449289.1 chr1:173833038-173837127 11 531 3538 intergenic -1.86 0 1,1,1 1 0,0,0 0 37.2699265121538 169.822 17.9736346516008 66.4307518371962 196.817 40.6817325800377 74.3651780667043 181.132 0 0 chimp,human,macaque,marmoset,orangutan, lincRNA non_coding A549@84.423,AG04450@47.9208,BJ@43.4418,GM12878@83.9671,H1HESC@73.4866,HELAS3@139.983,HEPG2@76.9135,HMEC@34.6799,HSMM@27.9762,HUVEC@32.2132,K562@174.882,MCF7@66.5218,NHEK@58.6699,NHLF@29.0764,SKNSHRA@41.7767, 0 0 0 0 ENSG00000234741.2 ENST00000414075.1 chr1:173833039-173835344 7 406 1887 intergenic -0.78 1 1,1,1 0 0,0,0 0 43.5633280339163 33.723 21.6748768472906 80.7186009538951 63.694 23.9729064039409 86.1642819289878 77.063 0 0 chimp,human,macaque,marmoset,orangutan, lincRNA non_coding A549@84.423,AG04450@47.9208,BJ@43.4418,GM12878@83.9671,H1HESC@73.4866,HELAS3@139.983,HEPG2@76.9135,HMEC@34.6799,HSMM@27.9762,HUVEC@32.2132,K562@174.882,MCF7@66.5218,NHEK@58.6699,NHLF@29.0764,SKNSHRA@41.7767, 0 0 0 0 ENSG00000234741.2 ENST00000436285.1 chr1:173833039-173836181 10 762 2362 intergenic 0.28 1 0,0,1 0 0,0,0 0 49.080016934801 15.934 11.8740157480315 91.24216765453 27.707 27.3083989501312 101.34250635055 31.86 0 0 chimp,elephant,human,macaque,marmoset,orangutan, lincRNA non_coding A549@84.423,AG04450@47.9208,BJ@43.4418,GM12878@83.9671,H1HESC@73.4866,HELAS3@139.983,HEPG2@76.9135,HMEC@34.6799,HSMM@27.9762,HUVEC@32.2132,K562@174.882,MCF7@66.5218,NHEK@58.6699,NHLF@29.0764,SKNSHRA@41.7767, 0 0 0 0 ENSG00000234741.2 ENST00000448718.1 chr1:173833039-173836181 11 554 2568 intergenic -0.78 1 0,0,1 0 0,0,0 0 45.1429127725857 15.934 16.3321299638989 83.9228971962617 27.707 37.5613718411552 93.2130062305296 31.86 0 0 chimp,cow,human,macaque,marmoset,orangutan, lincRNA non_coding A549@84.423,AG04450@47.9208,BJ@43.4418,GM12878@83.9671,H1HESC@73.4866,HELAS3@139.983,HEPG2@76.9135,HMEC@34.6799,HSMM@27.9762,HUVEC@32.2132,K562@174.882,MCF7@66.5218,NHEK@58.6699,NHLF@29.0764,SKNSHRA@41.7767, 0 0 0 0 ENSG00000234741.2 ENST00000456812.2 chr1:173833039-173836181 9 714 2412 intergenic -0.78 1 0,0,1 0 0,0,0 0 47.2978376172991 15.934 50.3214814814815 77.9706242350061 27.707 53.3688888888889 87.1811505507956 31.86 0 0 chimp,guinea_pig,horse,human,macaque,marmoset,mouse,orangutan, lincRNA non_coding A549@84.423,AG04450@47.9208,BJ@43.4418,GM12878@83.9671,H1HESC@73.4866,HELAS3@139.983,HEPG2@76.9135,HMEC@34.6799,HSMM@27.9762,HUVEC@32.2132,K562@174.882,MCF7@66.5218,NHEK@58.6699,NHLF@29.0764,SKNSHRA@41.7767, 0 0 0 0 ENSG00000234741.2 ENST00000452197.1 chr1:173833039-173837121 9 474 3592 intergenic -2.24 1 1,1,1 1 0,0,0 0 36.7096325167038 166.702 2.12447257383966 65.6091314031181 194.101 25.0949367088608 73.4312360801782 178.785 0 0 chimp,human,macaque,marmoset,orangutan, lincRNA non_coding A549@84.423,AG04450@47.9208,BJ@43.4418,GM12878@83.9671,H1HESC@73.4866,HELAS3@139.983,HEPG2@76.9135,HMEC@34.6799,HSMM@27.9762,HUVEC@32.2132,K562@174.882,MCF7@66.5218,NHEK@58.6699,NHLF@29.0764,SKNSHRA@41.7767, 0 0 0 0 ENSG00000234741.2 ENST00000412059.1 chr1:173833039-173837125 10 969 3099 intergenic 0.28 1 1,1,1 1 0,0,0 23.6945304437564 35.1406905453372 168.782 41.2321981424149 65.8683446272991 443.581 55.3797729618163 74.3059051306873 180.177 0 0 chimp,cow,dog,elephant,human,macaque,marmoset,mouse,orangutan,panda, lincRNA non_coding A549@84.423,AG04450@47.9208,BJ@43.4418,GM12878@83.9671,H1HESC@73.4866,HELAS3@139.983,HEPG2@76.9135,HMEC@34.6799,HSMM@27.9762,HUVEC@32.2132,K562@174.882,MCF7@66.5218,NHEK@58.6699,NHLF@29.0764,SKNSHRA@41.7767, 0 0 0 0 ENSG00000234741.2 ENST00000450589.1 chr1:173833039-173837125 12 620 3444 intergenic 0.28 1 1,1,1 1 0,0,0 0 38.2871660859466 168.782 15.7935483870968 68.0278745644599 443.581 34.8161290322581 76.1762485481998 180.177 0 0 chimp,human,macaque,marmoset,orangutan,rabbit, lincRNA non_coding A549@84.423,AG04450@47.9208,BJ@43.4418,GM12878@83.9671,H1HESC@73.4866,HELAS3@139.983,HEPG2@76.9135,HMEC@34.6799,HSMM@27.9762,HUVEC@32.2132,K562@174.882,MCF7@66.5218,NHEK@58.6699,NHLF@29.0764,SKNSHRA@41.7767, 0 0 0 0 ENSG00000234741.2 ENST00000431268.1 chr1:173833039-173837127 8 1690 2384 intergenic 0.28 1 1,1,1 1 0,0,0 35.2100591715976 30.3506711409396 169.822 56.3349112426035 62.5511744966443 196.817 107.483431952663 70.4043624161074 181.132 0 0 chimp,human,macaque,marmoset,orangutan, lincRNA non_coding A549@84.423,AG04450@47.9208,BJ@43.4418,GM12878@83.9671,H1HESC@73.4866,HELAS3@139.983,HEPG2@76.9135,HMEC@34.6799,HSMM@27.9762,HUVEC@32.2132,K562@174.882,MCF7@66.5218,NHEK@58.6699,NHLF@29.0764,SKNSHRA@41.7767, 0 0 0 0 ENSG00000234741.2 ENST00000436656.1 chr1:173833039-173837127 11 811 3257 intergenic -4.43 1 1,1,1 1 0,0,0 0 40.4854160270187 169.822 31.8113440197287 67.1713233036537 196.817 44.7324290998767 76.2750997850783 181.132 0 0 chimp,human,macaque,marmoset,orangutan, lincRNA non_coding A549@84.423,AG04450@47.9208,BJ@43.4418,GM12878@83.9671,H1HESC@73.4866,HELAS3@139.983,HEPG2@76.9135,HMEC@34.6799,HSMM@27.9762,HUVEC@32.2132,K562@174.882,MCF7@66.5218,NHEK@58.6699,NHLF@29.0764,SKNSHRA@41.7767, 0 0 0 0 ENSG00000234741.2 ENST00000430245.1 chr1:173833039-173838020 13 710 4247 intronic -0.51 1 0,0,1 1 0,0,0 24.9014084507042 53.6479868142218 148.2 17.056338028169 91.6442194490228 160.361 33.6366197183099 95.6571697668943 141.727 0 0 chimp,cow,human,macaque,marmoset,orangutan, lincRNA non_coding A549@84.423,AG04450@47.9208,BJ@43.4418,GM12878@83.9671,H1HESC@73.4866,HELAS3@139.983,HEPG2@76.9135,HMEC@34.6799,HSMM@27.9762,HUVEC@32.2132,K562@174.882,MCF7@66.5218,NHEK@58.6699,NHLF@29.0764,SKNSHRA@41.7767, 0 0 0 0 ENSG00000234741.2 ENST00000454813.1 chr1:173833040-173834009 3 618 347 intergenic -10.02 1 1,1,1 0 0,0,0 65.9288025889968 0 22.176 76.3252427184466 71.7694524495677 55.712 82.8705501618123 74.8530259365994 58.19 0 0 chimp,cow,dog,elephant,horse,human,macaque,marmoset,mouse,orangutan,rabbit, lincRNA non_coding A549@84.423,AG04450@47.9208,BJ@43.4418,GM12878@83.9671,H1HESC@73.4866,HELAS3@139.983,HEPG2@76.9135,HMEC@34.6799,HSMM@27.9762,HUVEC@32.2132,K562@174.882,MCF7@66.5218,NHEK@58.6699,NHLF@29.0764,SKNSHRA@41.7767, 0 0 0 0 ENSG00000234741.2 ENST00000422183.1 chr1:173833040-173836181 10 735 2388 intergenic -0.78 1 0,0,1 0 0,0,0 0 48.5456448911223 15.934 46.5510204081633 79.819932998325 27.707 64.0816326530612 89.3622278056951 31.86 0 0 chimp,human,macaque,marmoset,orangutan,rabbit, lincRNA non_coding A549@84.423,AG04450@47.9208,BJ@43.4418,GM12878@83.9671,H1HESC@73.4866,HELAS3@139.983,HEPG2@76.9135,HMEC@34.6799,HSMM@27.9762,HUVEC@32.2132,K562@174.882,MCF7@66.5218,NHEK@58.6699,NHLF@29.0764,SKNSHRA@41.7767, 0 0 0 0 ENSG00000234741.2 ENST00000422207.1 chr1:173833042-173834044 3 640 358 intergenic -10.02 1 1,1,1 0 0,0,0 43.284375 64.1340782122905 12.6 45.19375 153.815642458101 44.905 50.465625 162.153631284916 46.116 0 0 cat,chimp,cow,elephant,human,macaque,marmoset,orangutan, lincRNA non_coding A549@84.423,AG04450@47.9208,BJ@43.4418,GM12878@83.9671,H1HESC@73.4866,HELAS3@139.983,HEPG2@76.9135,HMEC@34.6799,HSMM@27.9762,HUVEC@32.2132,K562@174.882,MCF7@66.5218,NHEK@58.6699,NHLF@29.0764,SKNSHRA@41.7767, 0 0 0 0 ENSG00000234741.2 ENST00000454068.1 chr1:173833049-173836953 12 676 3206 intergenic 5.71 1 0,0,1 0 0,0,0 6.08284023668639 39.7666874610106 95.982 19.2855029585799 71.6968184653774 158.257 37.5 80.2632563942608 147.25 0 0 chimp,human,macaque,marmoset,orangutan, lincRNA non_coding A549@84.423,AG04450@47.9208,BJ@43.4418,GM12878@83.9671,H1HESC@73.4866,HELAS3@139.983,HEPG2@76.9135,HMEC@34.6799,HSMM@27.9762,HUVEC@32.2132,K562@174.882,MCF7@66.5218,NHEK@58.6699,NHLF@29.0764,SKNSHRA@41.7767, 0 0 0 0 ENSG00000234741.2 ENST00000444470.1 chr1:173833092-173834043 4 420 525 intergenic -10.02 1 1,1,1 0 0,0,0 65.9571428571429 43.7333333333333 12.6 68.1404761904762 104.887619047619 45.21 76.1071428571429 110.573333333333 46.449 0 0 chimp,cow,elephant,guinea_pig,human,macaque,marmoset,opossum,orangutan, lincRNA non_coding A549@84.423,AG04450@47.9208,BJ@43.4418,GM12878@83.9671,H1HESC@73.4866,HELAS3@139.983,HEPG2@76.9135,HMEC@34.6799,HSMM@27.9762,HUVEC@32.2132,K562@174.882,MCF7@66.5218,NHEK@58.6699,NHLF@29.0764,SKNSHRA@41.7767, 0 0 0 0 ENSG00000234741.2 ENST00000434796.1 chr1:173833118-173834039 3 572 345 intergenic -10.02 1 0,1,1 0 0,0,0 48.4300699300699 66.5507246376812 12.6 91.8986013986014 87.4260869565217 46.43 99.5174825174825 92.9768115942029 47.781 0 0 chimp,cow,dog,guinea_pig,horse,human,macaque,marmoset,mouse,orangutan,pig,platypus,rabbit,rat, lincRNA non_coding A549@84.423,AG04450@47.9208,BJ@43.4418,GM12878@83.9671,H1HESC@73.4866,HELAS3@139.983,HEPG2@76.9135,HMEC@34.6799,HSMM@27.9762,HUVEC@32.2132,K562@174.882,MCF7@66.5218,NHEK@58.6699,NHLF@29.0764,SKNSHRA@41.7767, 0 0 0 0 ENSG00000234741.2 ENST00000449589.1 chr1:173833154-173837127 11 701 3252 intergenic 0.28 1 1,1,1 1 0,0,0 12.6148359486448 37.8284132841328 169.822 49.2910128388017 64.5064575645756 196.817 164.894436519258 71.9249692496925 181.132 0 0 chimp,elephant,human,macaque,marmoset,mouse,orangutan, lincRNA non_coding A549@84.423,AG04450@47.9208,BJ@43.4418,GM12878@83.9671,H1HESC@73.4866,HELAS3@139.983,HEPG2@76.9135,HMEC@34.6799,HSMM@27.9762,HUVEC@32.2132,K562@174.882,MCF7@66.5218,NHEK@58.6699,NHLF@29.0764,SKNSHRA@41.7767, 0 0 0 0 ENSG00000234741.2 ENST00000422008.1 chr1:173833622-173836168 8 489 2043 intergenic -0.78 0 0,1,0 0 0,0,0 0 45.5051395007342 15.934 17.9652351738241 78.5354870288791 22.806 41.9059304703476 88.7518355359765 27.141 0 0 chimp,cow,human,macaque,marmoset,orangutan, lincRNA non_coding A549@84.423,AG04450@47.9208,BJ@43.4418,GM12878@83.9671,H1HESC@73.4866,HELAS3@139.983,HEPG2@76.9135,HMEC@34.6799,HSMM@27.9762,HUVEC@32.2132,K562@174.882,MCF7@66.5218,NHEK@58.6699,NHLF@29.0764,SKNSHRA@41.7767, 0 0 0 0 ENSG00000234741.2 ENST00000442067.1 chr1:173833769-173836181 6 1108 1294 intergenic -4.43 0 0,0,1 0 0,0,0 25.0018050541516 50.4366306027821 15.934 49.6705776173285 88.4435857805255 27.707 61.9539711191336 103.105100463679 31.86 0 0 chimp,human,macaque,marmoset,orangutan, lincRNA non_coding A549@84.423,AG04450@47.9208,BJ@43.4418,GM12878@83.9671,H1HESC@73.4866,HELAS3@139.983,HEPG2@76.9135,HMEC@34.6799,HSMM@27.9762,HUVEC@32.2132,K562@174.882,MCF7@66.5218,NHEK@58.6699,NHLF@29.0764,SKNSHRA@41.7767, 0 0 0 0 ENSG00000234741.2 ENST00000455838.1 chr1:173834093-173837127 8 624 2396 intergenic 0.28 0 1,1,1 1 0,0,0 0 33.8893989983306 169.822 15.6682692307692 62.0747078464107 196.817 34.9150641025641 71.0855592654424 181.132 0 0 chimp,human,macaque,marmoset,orangutan, lincRNA non_coding A549@84.423,AG04450@47.9208,BJ@43.4418,GM12878@83.9671,H1HESC@73.4866,HELAS3@139.983,HEPG2@76.9135,HMEC@34.6799,HSMM@27.9762,HUVEC@32.2132,K562@174.882,MCF7@66.5218,NHEK@58.6699,NHLF@29.0764,SKNSHRA@41.7767, 0 0 0 0 ENSG00000234741.2 ENST00000416952.1 chr1:173834306-173837126 6 793 2017 intergenic -4.15 0 0,1,0 1 0,0,0 11.1513240857503 35.8730788299455 169.302 63.1134930643127 53.8953891918691 196.199 162.911727616646 63.4343083787804 439.525 0 0 chimp,dog,elephant,guinea_pig,horse,human,macaque,marmoset,mouse,orangutan,panda,pig,platypus,rabbit,rat, lincRNA non_coding A549@84.423,AG04450@47.9208,BJ@43.4418,GM12878@83.9671,H1HESC@73.4866,HELAS3@139.983,HEPG2@76.9135,HMEC@34.6799,HSMM@27.9762,HUVEC@32.2132,K562@174.882,MCF7@66.5218,NHEK@58.6699,NHLF@29.0764,SKNSHRA@41.7767, 0 0 0 0 ENSG00000234741.2 ENST00000456293.1 chr1:173834387-173837129 7 576 2154 intergenic -0.78 0 1,1,1 1 0,0,0 32.8854166666667 28.9029712163417 170.862 49.7465277777778 57.1926648096564 198.053 73.9079861111111 65.9410399257196 182.346 0 0 chimp,dog,human,macaque,marmoset,orangutan,panda,rabbit, lincRNA non_coding A549@84.423,AG04450@47.9208,BJ@43.4418,GM12878@83.9671,H1HESC@73.4866,HELAS3@139.983,HEPG2@76.9135,HMEC@34.6799,HSMM@27.9762,HUVEC@32.2132,K562@174.882,MCF7@66.5218,NHEK@58.6699,NHLF@29.0764,SKNSHRA@41.7767, 0 0 0 0 ENSG00000234741.2 ENST00000443799.1 chr1:173834491-173837127 5 892 1736 intergenic -1.15 0 1,1,1 1 0,0,0 31.1491031390135 30.7684331797235 169.822 74.0706278026906 47.9084101382488 196.817 165.192825112108 57.4095622119816 181.132 0 0 chimp,cow,dog,elephant,guinea_pig,horse,human,macaque,marmoset,mouse,orangutan,panda,rabbit, lincRNA non_coding A549@84.423,AG04450@47.9208,BJ@43.4418,GM12878@83.9671,H1HESC@73.4866,HELAS3@139.983,HEPG2@76.9135,HMEC@34.6799,HSMM@27.9762,HUVEC@32.2132,K562@174.882,MCF7@66.5218,NHEK@58.6699,NHLF@29.0764,SKNSHRA@41.7767, 0 0 0 0 ENSG00000234741.2 ENST00000451607.1 chr1:173834662-173836867 7 789 1404 intergenic 3.06 0 0,0,1 0 0,0,0 17.2636248415716 46.4850427350427 98.038 31.4702154626109 81.514245014245 154.86 51.169835234474 95.0270655270655 144.183 0 0 chimp,human,macaque,marmoset,orangutan, lincRNA non_coding A549@84.423,AG04450@47.9208,BJ@43.4418,GM12878@83.9671,H1HESC@73.4866,HELAS3@139.983,HEPG2@76.9135,HMEC@34.6799,HSMM@27.9762,HUVEC@32.2132,K562@174.882,MCF7@66.5218,NHEK@58.6699,NHLF@29.0764,SKNSHRA@41.7767, 0 0 0 0 ENSG00000234741.2 ENST00000421068.1 chr1:173834956-173837125 3 1057 1108 intergenic -1.15 0 1,1,1 1 0,0,0 33.3632923368023 30.0848375451264 168.782 62.6215704824976 39.6561371841155 443.581 75.8202459791864 45.4657039711191 180.177 0 0 chimp,cow,elephant,horse,human,macaque,marmoset,mouse,orangutan,panda,pig, lincRNA non_coding A549@84.423,AG04450@47.9208,BJ@43.4418,GM12878@83.9671,H1HESC@73.4866,HELAS3@139.983,HEPG2@76.9135,HMEC@34.6799,HSMM@27.9762,HUVEC@32.2132,K562@174.882,MCF7@66.5218,NHEK@58.6699,NHLF@29.0764,SKNSHRA@41.7767, 0 0 0 0 ENSG00000234741.2 ENST00000432536.1 chr1:173834997-173836827 5 836 986 intergenic -1.12 0 0,0,1 0 0,0,0 3.99641148325359 53.4127789046653 108.318 14.0968899521531 89.9959432048682 164.521 29.8122009569378 106.55476673428 156.188 0 0 chimp,human,macaque,marmoset,orangutan, lincRNA non_coding A549@84.423,AG04450@47.9208,BJ@43.4418,GM12878@83.9671,H1HESC@73.4866,HELAS3@139.983,HEPG2@76.9135,HMEC@34.6799,HSMM@27.9762,HUVEC@32.2132,K562@174.882,MCF7@66.5218,NHEK@58.6699,NHLF@29.0764,SKNSHRA@41.7767, 0 0 0 0 ENSG00000234741.2 ENST00000425771.1 chr1:173835005-173836178 5 237 928 intergenic -4.43 0 0,1,1 0 0,0,0 0 56.7510775862069 15.934 37.3628691983122 95.3157327586207 26.576 86.7426160337553 112.908405172414 30.771 0 0 chimp,elephant,human,macaque,marmoset,orangutan,rabbit, lincRNA non_coding A549@84.423,AG04450@47.9208,BJ@43.4418,GM12878@83.9671,H1HESC@73.4866,HELAS3@139.983,HEPG2@76.9135,HMEC@34.6799,HSMM@27.9762,HUVEC@32.2132,K562@174.882,MCF7@66.5218,NHEK@58.6699,NHLF@29.0764,SKNSHRA@41.7767, 0 0 0 0 ENSG00000234741.2 ENST00000458220.1 chr1:173835354-173837125 4 465 1300 intergenic -7.49 0 0,1,0 1 0,0,0 16.0860215053763 32.4438461538462 168.782 31.741935483871 52.6553846153846 443.581 47.2967741935484 60.6361538461538 180.177 0 0 chimp,cow,human,macaque,marmoset,orangutan, lincRNA non_coding A549@84.423,AG04450@47.9208,BJ@43.4418,GM12878@83.9671,H1HESC@73.4866,HELAS3@139.983,HEPG2@76.9135,HMEC@34.6799,HSMM@27.9762,HUVEC@32.2132,K562@174.882,MCF7@66.5218,NHEK@58.6699,NHLF@29.0764,SKNSHRA@41.7767, 0 0 0 0 ENSG00000236535.1 ENST00000421851.1 chr1:173978405-173985344 2 446 6491 intronic -4.99 0 0,1,0 0 0,0,0 0 0 0 0 4.80110922816207 5.65 0 6.22246187028193 6.897 0 0 chimp,human,macaque,orangutan, sense_intronic sense_intronic A549@0.39579,AG04450@0.224571,BJ@0.324943,GM12878@0.110348,H1HESC@0.167544,HELAS3@0.24321,HEPG2@0.373418,HMEC@0,HSMM@0.909835,HUVEC@0.500664,K562@0.0900445,MCF7@2.64488,NHEK@0.339405,NHLF@0.58761,SKNSHRA@0.389034, 1 96 0 0 ENSG00000224977.1 ENST00000424181.1 chr1:173991647-173992123 2 333 141 intergenic 3.77 1 0,1,1 0 0,0,0 0 0 151.416 0 0 217.559 0 0 239.494 0 0 chimp,cow,human,macaque,marmoset,orangutan,pig, lincRNA lincRNA A549@0.153867,AG04450@0.016316,BJ@0.00966,GM12878@0.006997,H1HESC@0.487845,HELAS3@0.282591,HEPG2@0.069276,HMEC@0,HSMM@0.093205,HUVEC@0.10674,K562@0.198892,MCF7@0.3428,NHEK@0.020647,NHLF@0.0058245,SKNSHRA@0.20893, 0 0 0 0 ENSG00000227373.1 ENST00000426899.1 chr1:174084438-174128291 3 685 43164 intergenic 0.36 0 0,0,1 0 0,0,0 0 4.47738856454453 0 0 4.88583078491335 45.438 0 10.2159438420906 38.542 0 0 chimp,elephant,human,macaque,marmoset,orangutan,pig, lincRNA lincRNA A549@0.003155,AG04450@0.003423,BJ@0,GM12878@0,H1HESC@0,HELAS3@0.023554,HEPG2@0.0324635,HMEC@0,HSMM@0.004261,HUVEC@0,K562@0.015468,MCF7@0.016717,NHEK@0.0255933,NHLF@0.0028045,SKNSHRA@0.006296, 0 0 0 0 ENSG00000227373.1 ENST00000419983.1 chr1:174084521-174129142 4 531 44084 intronic -4.74 0 0,1,0 0 0,0,0 0 4.38394882497051 27.295 20.3841807909604 5.32007077397695 87.455 6.55367231638418 10.6319980038109 89.77 0 0 chimp,elephant,human,macaque,marmoset,orangutan, lincRNA lincRNA A549@0.003155,AG04450@0.003423,BJ@0,GM12878@0,H1HESC@0,HELAS3@0.023554,HEPG2@0.0324635,HMEC@0,HSMM@0.004261,HUVEC@0,K562@0.015468,MCF7@0.016717,NHEK@0.0255933,NHLF@0.0028045,SKNSHRA@0.006296, 0 0 0 0 ENSG00000227373.1 ENST00000454467.1 chr1:174084739-174128271 3 358 43170 intergenic 0.36 0 0,0,1 0 0,0,0 0 4.47676627287468 0 0 4.88515172573547 41.298 0 10.2145239749826 37.327 0 0 chimp,cow,elephant,guinea_pig,human,macaque,marmoset,orangutan,pig, lincRNA lincRNA A549@0.003155,AG04450@0.003423,BJ@0,GM12878@0,H1HESC@0,HELAS3@0.023554,HEPG2@0.0324635,HMEC@0,HSMM@0.004261,HUVEC@0,K562@0.015468,MCF7@0.016717,NHEK@0.0255933,NHLF@0.0028045,SKNSHRA@0.006296, 0 0 0 0 ENSG00000227373.1 ENST00000430592.1 chr1:174090776-174128425 4 444 37199 intergenic 0.36 1 1,1,1 0 0,0,0 0 2.83217290787387 0 0 3.95916556896691 60.095 0 9.78942982338235 53.007 0 0 chimp,elephant,human,macaque,marmoset,orangutan, lincRNA lincRNA A549@0.003155,AG04450@0.003423,BJ@0,GM12878@0,H1HESC@0,HELAS3@0.023554,HEPG2@0.0324635,HMEC@0,HSMM@0.004261,HUVEC@0,K562@0.015468,MCF7@0.016717,NHEK@0.0255933,NHLF@0.0028045,SKNSHRA@0.006296, 0 0 0 0 ENSG00000223525.1 ENST00000414890.1 chr1:174866095-174867133 2 735 301 intronic -11.08 0 0,0,1 0 0,0,0 0 0 0 0 0 0 0 0 0 0 0 chimp,human,orangutan, sense_intronic sense_intronic A549@0.0181905,AG04450@0.013642,BJ@0.003086,GM12878@0.004255,H1HESC@0.180933,HELAS3@0.040934,HEPG2@0.0351915,HMEC@0,HSMM@0,HUVEC@0.0174155,K562@0.072018,MCF7@0.0237175,NHEK@0.00560433,NHLF@0,SKNSHRA@0.0227415, 0 0 0 0 ENSG00000229531.1 ENST00000452442.1 chr1:174904084-174923398 6 664 18640 intronic -5.51 1 0,0,1 0 0,0,0 19.7394578313253 6.31405579399142 45.513 18.6490963855422 9.50407725321888 64.974 18.894578313253 13.5521995708155 62.028 0 0 cat,chimp,cow,dog,elephant,horse,human,macaque,marmoset,orangutan,panda,pig, antisense antisense A549@0.0093775,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0.0325735,HEPG2@0.005186,HMEC@0,HSMM@0,HUVEC@0,K562@0.0095045,MCF7@0.003822,NHEK@0,NHLF@0.0037095,SKNSHRA@0, 0 0 0 0 ENSG00000229531.1 ENST00000448686.1 chr1:174914660-174918013 2 524 2827 intronic -16.47 1 0,1,1 0 0,0,0 0 0 0 0 2.00247612309869 5.364 4.31106870229008 2.80721613017333 14.745 0 0 cat,chimp,cow,dog,elephant,guinea_pig,horse,human,macaque,marmoset,orangutan,pig, antisense antisense A549@0.0093775,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0.0325735,HEPG2@0.005186,HMEC@0,HSMM@0,HUVEC@0,K562@0.0095045,MCF7@0.003822,NHEK@0,NHLF@0.0037095,SKNSHRA@0, 0 0 0 0 ENSG00000235750.3 ENST00000546143.1 chr1:175126123-175135877 2 4338 5414 intergenic 26.53 1 0,0,1 0 0,0,1 13.7183033656063 39.8827114887329 0 32.736745043799 29.5910602142593 0 35.1532964499769 26.9689693387514 3.888 0 0 chimp,dog,human,macaque,marmoset,orangutan,pig, lincRNA processed_transcript A549@0.224527,AG04450@0.0020285,BJ@2.36857,GM12878@12.9752,H1HESC@4.49492,HELAS3@4.60311,HEPG2@0.961183,HMEC@29.3046,HSMM@0.085913,HUVEC@2.20663,K562@2.0746,MCF7@1.78727,NHEK@19.3116,NHLF@2.48124,SKNSHRA@0.31242, 0 0 0 0 ENSG00000235750.3 ENST00000423313.1 chr1:175126123-175161929 4 4560 31240 intergenic 26.53 1 1,1,1 1 0,0,1 13.0504385964912 14.5722151088348 0 31.894298245614 15.948847631242 19.914 34.4245614035088 16.5401728553137 16.872 0 0 chimp,dog,human,macaque,marmoset,orangutan,pig, lincRNA processed_transcript A549@0.224527,AG04450@0.0020285,BJ@2.36857,GM12878@12.9752,H1HESC@4.49492,HELAS3@4.60311,HEPG2@0.961183,HMEC@29.3046,HSMM@0.085913,HUVEC@2.20663,K562@2.0746,MCF7@1.78727,NHEK@19.3116,NHLF@2.48124,SKNSHRA@0.31242, 0 0 0 0 ENSG00000235750.3 ENST00000545251.1 chr1:175126123-175161949 3 4507 31315 intergenic 26.53 1 1,1,1 1 0,0,1 13.2039050366097 14.537314386077 0 32.2693587752385 15.9106498483155 19.914 34.8293765254049 16.5005588376178 16.872 0 0 chimp,dog,human,macaque,marmoset,orangutan,pig, lincRNA processed_transcript A549@0.224527,AG04450@0.0020285,BJ@2.36857,GM12878@12.9752,H1HESC@4.49492,HELAS3@4.60311,HEPG2@0.961183,HMEC@29.3046,HSMM@0.085913,HUVEC@2.20663,K562@2.0746,MCF7@1.78727,NHEK@19.3116,NHLF@2.48124,SKNSHRA@0.31242, 0 0 0 0 ENSG00000235750.3 ENST00000444639.1 chr1:175126123-175162079 4 4490 31460 intergenic 26.53 1 1,1,1 1 0,0,1 13.2538975501114 14.4703115066751 0 32.243429844098 16.343006993007 4.701 35.6367483296214 16.6284806102988 7.503 0 0 chimp,dog,human,macaque,marmoset,orangutan,pig, lincRNA processed_transcript A549@0.224527,AG04450@0.0020285,BJ@2.36857,GM12878@12.9752,H1HESC@4.49492,HELAS3@4.60311,HEPG2@0.961183,HMEC@29.3046,HSMM@0.085913,HUVEC@2.20663,K562@2.0746,MCF7@1.78727,NHEK@19.3116,NHLF@2.48124,SKNSHRA@0.31242, 0 0 0 0 ENSG00000227085.1 ENST00000437695.1 chr1:175126670-175127666 2 799 195 intergenic 1.49 0 0,1,0 0 0,0,0 8.97371714643304 0 0 28.171464330413 0 0 36.8698372966208 0 0 0 0 chimp,dog,elephant,horse,human,marmoset,orangutan,panda, lincRNA lincRNA A549@0,AG04450@0.0040255,BJ@0.003021,GM12878@0.02549,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0.010224,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0.0178427,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000230687.1 ENST00000412357.1 chr1:175172364-175173985 2 773 846 intergenic 1.14 0 0,0,0 0 0,0,0 0 41.063829787234 0 0 1.90307328605201 0 0 2.01063829787234 0 0 0 chimp,human,macaque,marmoset,orangutan,rabbit, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0.006849,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0.0029275, 0 0 0 0 ENSG00000229218.1 ENST00000448304.1 chr1:175276354-175304595 5 842 27391 intronic 6.86 0 0,0,0 0 0,0,0 3.97387173396675 15.4421525318535 0 3.22446555819477 22.7672228104122 0 0.666270783847981 26.1292395312329 0 0 0 chimp,cow,human,macaque,orangutan,pig, antisense ambiguous_orf A549@0,AG04450@0,BJ@0,GM12878@0.035376,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0.0028705,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000235628.1 ENST00000455447.1 chr1:175507911-175525954 2 628 17413 intronic 0.58 0 0,0,0 0 0,0,0 0 23.2254063056337 0 0 27.2167920519152 3.585 0 26.3444552920232 5.29 0 0 chimp,horse,human,orangutan, sense_intronic sense_intronic A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0.0148075, 0 0 0 0 ENSG00000224718.1 ENST00000457217.1 chr1:175846479-175849604 3 1806 1315 intergenic 3.15 1 0,0,0 0 0,0,0 0 0 0 0 21.5969581749049 0 0 24.119391634981 0 1 1 chimp,human,macaque,marmoset,orangutan, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0.0029525,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000227740.1 ENST00000426575.1 chr1:175873898-175889649 3 654 15093 intergenic -2.33 1 0,0,0 0 0,0,0 0 0.524746571258199 0 1.46177370030581 0.502815874908898 1.53 1.48623853211009 1.3033856754787 4.47 0 0 chimp,horse,human,macaque,marmoset,orangutan, lincRNA lincRNA A549@0.4222,AG04450@0.376294,BJ@0.0986345,GM12878@0.184266,H1HESC@0.0088595,HELAS3@0.197468,HEPG2@0.137947,HMEC@0.062323,HSMM@0.110106,HUVEC@0.250991,K562@0.062117,MCF7@0.378757,NHEK@0.19892,NHLF@0.035407,SKNSHRA@0.536534, 0 0 0 0 ENSG00000228686.2 ENST00000426030.2 chr1:175986413-175987896 2 627 854 intronic 0 0 0,0,1 0 0,0,0 0 0 0 0 0 0 0 0 3.159 0 0 cat,chimp,horse,human,macaque,marmoset,orangutan, antisense antisense A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000236021.1 ENST00000456125.1 chr1:176176784-176198466 3 576 21102 intergenic -3.32 0 0,0,0 1 0,0,0 0 0.804141787508293 139.814 5.89583333333333 3.24177803051843 255.809 6.04166666666667 4.79390579092029 226.189 0 0 chimp,human,macaque,orangutan, antisense antisense A549@0.225398,AG04450@0.0824025,BJ@0.0741875,GM12878@0.57801,H1HESC@0.054738,HELAS3@0.380256,HEPG2@0.0967595,HMEC@0.007072,HSMM@0.116765,HUVEC@0.0163165,K562@0.562451,MCF7@0.321261,NHEK@0.104867,NHLF@0.060247,SKNSHRA@0.292577, 0 0 0 0 ENSG00000230220.1 ENST00000454327.1 chr1:176477904-176478979 2 519 554 intronic 1.16 0 0,0,0 0 0,0,0 0 0 0 0 0 0 0 0 0 0 0 chimp,human,macaque,orangutan, sense_intronic sense_intronic A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000224968.1 ENST00000451341.1 chr1:177320722-177335408 4 487 14193 intergenic 2.81 0 0,0,0 0 0,0,0 0 27.3485521031494 0 21.7207392197125 45.9890086662439 6.049 17.7145790554415 45.7685478757134 18.125 0 0 chimp,cow,guinea_pig,human,macaque,marmoset,orangutan, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000227579.1 ENST00000438575.1 chr1:177362423-177546084 3 795 182862 intergenic -0.76 0 0,1,0 0 0,0,0 27.3018867924528 15.8115464120484 0 32.5584905660377 19.2471207796043 0 40.8150943396226 20.1402915860047 0 0 0 cat,chimp,cow,dog,elephant,guinea_pig,horse,human,macaque,marmoset,mouse,orangutan,panda,pig,rabbit,rat, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0.36635,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0.010262,HSMM@0.250038,HUVEC@0,K562@0,MCF7@0.02296,NHEK@0,NHLF@0.0035735,SKNSHRA@0, 0 0 0 0 ENSG00000227579.1 ENST00000458070.1 chr1:177362815-177566844 4 542 203481 intergenic -2.65 0 0,0,0 0 0,0,0 57.6752767527675 18.1401555919226 0 98.3044280442805 21.5465670013416 3.824 95.280442804428 22.5913426806434 6.494 0 0 cat,chimp,cow,dog,elephant,guinea_pig,horse,human,macaque,marmoset,mouse,orangutan,pig,rabbit,rat, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0.36635,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0.010262,HSMM@0.250038,HUVEC@0,K562@0,MCF7@0.02296,NHEK@0,NHLF@0.0035735,SKNSHRA@0, 0 0 0 0 ENSG00000236720.1 ENST00000427173.1 chr1:177669659-177679465 4 1662 8138 intergenic 2.66 0 0,0,0 0 0,0,0 0 17.2123371835832 0 0.895306859205776 43.0701646596215 0 0.935018050541516 47.7868026542148 0 0 0 chimp,human,macaque,marmoset, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000233715.1 ENST00000441371.1 chr1:177893091-177897620 3 808 3717 intergenic 0.71 0 0,1,1 0 0,0,0 0 1.77562550443906 114.972 5.97648514851485 12.9612590799031 218.061 6.11014851485148 13.7678235135862 202.157 0 0 chimp,horse,human,macaque,marmoset,orangutan, processed_transcript processed_transcript A549@0.0299035,AG04450@0.0395465,BJ@0,GM12878@0.001289,H1HESC@0.0027045,HELAS3@0.052217,HEPG2@0.0393295,HMEC@0.016683,HSMM@0.01945,HUVEC@0,K562@0,MCF7@0,NHEK@0.0251453,NHLF@0.009019,SKNSHRA@0.0052125, 0 0 0 0 ENSG00000224687.1 ENST00000421505.1 chr1:178060643-178063119 2 2327 147 exonic -1.23 1 0,1,0 1 0,0,0 0.822948001718951 0 169.353 29.6850021486893 58.4965986394558 225.355 30.1701761925226 55.8367346938776 226.134 0 0 chimp,dog,horse,human,macaque,orangutan, lincRNA processed_transcript A549@0.464664,AG04450@0.202816,BJ@0.344375,GM12878@0.128271,H1HESC@0.480214,HELAS3@0.995765,HEPG2@0.264441,HMEC@0.504031,HSMM@1.00896,HUVEC@0.216971,K562@0.0311375,MCF7@0.087787,NHEK@0.237731,NHLF@0.308638,SKNSHRA@0.141077, 0 0 0 0 ENSG00000224687.1 ENST00000419458.1 chr1:178060644-178062735 2 1969 120 intergenic -1.23 1 0,1,0 0 0,0,0 0 0 129.951 14.8720162519045 42.875 219.173 14.4514982224479 45.7333333333333 222.631 0 0 chimp,human,macaque,orangutan, lincRNA processed_transcript A549@0.464664,AG04450@0.202816,BJ@0.344375,GM12878@0.128271,H1HESC@0.480214,HELAS3@0.995765,HEPG2@0.264441,HMEC@0.504031,HSMM@1.00896,HUVEC@0.216971,K562@0.0311375,MCF7@0.087787,NHEK@0.237731,NHLF@0.308638,SKNSHRA@0.141077, 0 0 0 0 ENSG00000224687.1 ENST00000452867.1 chr1:178062285-178062707 2 298 122 intergenic 0 0 1,1,1 0 0,0,0 0 0 118.275 48.7852348993289 42.172131147541 204.951 46.5771812080537 44.9836065573771 208.799 0 0 chimp,dog,elephant,guinea_pig,horse,human,macaque,marmoset,mouse,opossum,orangutan,panda,pig,rat, lincRNA processed_transcript A549@0.464664,AG04450@0.202816,BJ@0.344375,GM12878@0.128271,H1HESC@0.480214,HELAS3@0.995765,HEPG2@0.264441,HMEC@0.504031,HSMM@1.00896,HUVEC@0.216971,K562@0.0311375,MCF7@0.087787,NHEK@0.237731,NHLF@0.308638,SKNSHRA@0.141077, 0 0 0 0 ENSG00000226585.1 ENST00000422475.1 chr1:178326311-178333230 3 4752 2163 intronic -0.19 0 0,0,0 0 0,0,0 1.76178451178451 0 10.81 1.38825757575758 0 0 3.86826599326599 0 0 0 0 chimp,human,marmoset,orangutan, antisense antisense A549@0,AG04450@0,BJ@0,GM12878@0.00246,H1HESC@0,HELAS3@0,HEPG2@0.0012325,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0.0022625, 0 0 0 0 ENSG00000188585.5 ENST00000445098.1 chr1:178463034-178468769 5 2922 2805 intergenic 18.38 0 0,0,1 0 0,0,0 0 0 0 4.27310061601643 0 5.4 6.00718685831622 0 5.56 0 0 chimp,dog,human,macaque,orangutan, antisense antisense A549@0,AG04450@0.002023,BJ@0,GM12878@0,H1HESC@0,HELAS3@0.0018135,HEPG2@0,HMEC@0,HSMM@0.044248,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000228449.1 ENST00000438080.1 chr1:179070798-179074885 2 3895 190 exonic 3.84 0 0,0,0 0 0,0,0 51.3501925545571 0 12.88 42.5730423620026 0 0 48.7807445442876 0 0 0 0 cat,chimp,cow,dog,horse,human,macaque,marmoset,orangutan, antisense antisense A549@0.022383,AG04450@0.0162885,BJ@0.0129965,GM12878@0.0031035,H1HESC@0,HELAS3@0.008559,HEPG2@0.0010935,HMEC@0,HSMM@0.002112,HUVEC@0.0193075,K562@0.0012605,MCF7@0,NHEK@0.00727367,NHLF@0,SKNSHRA@0.0069905, 0 0 0 0 ENSG00000238030.1 ENST00000446865.1 chr1:179512336-179518057 2 3292 2427 intronic 1.59 0 0,0,0 0 0,0,0 0 0 0 2.64793438639125 2.16069221260816 3.824 4.67041312272175 2.26246394725999 8.713 0 0 chimp,human,macaque,orangutan, antisense ambiguous_orf A549@0,AG04450@0,BJ@0,GM12878@0.001224,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0.0012205,NHEK@0,NHLF@0,SKNSHRA@0.0016885, 0 0 0 0 ENSG00000229407.1 ENST00000453051.1 chr1:179785319-179786559 2 399 839 exonic 0.71 1 0,1,0 0 0,0,0 36.0501253132832 0 0 27.3634085213033 34.3098927294398 0 27.6641604010025 28.1179976162098 12.272 0 0 cat,chimp,cow,dog,elephant,guinea_pig,horse,human,macaque,marmoset,orangutan,panda,pig, antisense antisense A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0.005173,HELAS3@0,HEPG2@0.0073065,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000229407.1 ENST00000415218.1 chr1:179785319-179787326 2 542 1463 exonic 0.71 1 0,0,0 0 0,0,0 26.5387453874539 0 0 20.1439114391144 19.676008202324 0 33.1623616236162 19.7723855092276 11.14 0 0 cat,chimp,guinea_pig,horse,human,macaque,marmoset,orangutan,panda, antisense antisense A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0.005173,HELAS3@0,HEPG2@0.0073065,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000231966.1 ENST00000442108.1 chr1:179798744-179805259 2 351 6162 intergenic 0 0 0,0,0 0 0,0,0 0 0 0 0 1.71194417396949 0 0 4.05355404089581 0 0 0 chimp,human,marmoset,orangutan, lincRNA lincRNA A549@0.025257,AG04450@0.015058,BJ@0.0284705,GM12878@0.062058,H1HESC@0,HELAS3@0.0477015,HEPG2@0.0061635,HMEC@0,HSMM@0.0181155,HUVEC@0,K562@0.0139155,MCF7@0.022911,NHEK@0.0942353,NHLF@0,SKNSHRA@0.424075, 0 0 0 0 ENSG00000245778.1 ENST00000500152.1 chr1:179836662-179846917 2 1758 8495 exonic -4.14 0 1,1,1 0 0,0,0 0 2.80753384343732 0 1.12855517633675 3.1984696880518 9.779 2.07792946530148 3.80117716303708 10.261 0 0 chimp,human,macaque,marmoset,orangutan,panda,pig, lincRNA lincRNA A549@0,AG04450@0.001682,BJ@0.0077435,GM12878@0,H1HESC@0,HELAS3@0.0102705,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0.001986,K562@0,MCF7@0,NHEK@0.00150033,NHLF@0,SKNSHRA@0.0190175, 0 0 0 0 ENSG00000228969.1 ENST00000423721.1 chr1:179895776-179910931 3 445 14706 intergenic 0.17 0 0,0,1 0 0,0,0 0 2.19781041751666 9.24 0 9.62913096695226 3.72 0 13.8733850129199 13.612 0 0 chimp,horse,human,macaque,marmoset,orangutan, antisense ambiguous_orf A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0.020868,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0.0313285,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000231016.1 ENST00000439739.1 chr1:180086275-180093025 3 503 6243 intergenic -0.59 0 0,0,0 0 0,0,0 0 2.3209995194618 0 0 3.57776709915105 0 0 5.65593464680442 0 0 0 chimp,human,orangutan, lincRNA ambiguous_orf A549@0.0128695,AG04450@0,BJ@0,GM12878@0.009265,H1HESC@0,HELAS3@0.017862,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0.0097075,MCF7@0,NHEK@0.002609,NHLF@0.0642155,SKNSHRA@0, 0 0 0 0 ENSG00000230124.1 ENST00000415414.1 chr1:180238788-180243816 5 2662 2358 exonic 2.40 1 0,0,1 0 0,0,0 50.3095416979714 147.656488549618 27.687 58.2103681442524 154.003816793893 79.581 64.2392937640872 171.352841391009 82.601 0 0 chimp,cow,human,macaque,marmoset, antisense antisense A549@1.23487,AG04450@1.4105,BJ@1.28359,GM12878@1.64606,H1HESC@2.09223,HELAS3@4.45179,HEPG2@2.71529,HMEC@0.601477,HSMM@0.402011,HUVEC@2.18112,K562@2.4028,MCF7@3.18247,NHEK@1.24229,NHLF@0.25325,SKNSHRA@1.82614, 0 0 0 0 ENSG00000230124.1 ENST00000440959.1 chr1:180242921-180243887 2 427 537 exonic 1.62 0 0,0,0 0 0,0,0 49.7985948477752 605.929236499069 19.875 50.3395784543326 600.014897579144 68.702 61.7213114754098 668.728119180633 68.478 0 0 cat,chimp,cow,dog,elephant,guinea_pig,horse,human,macaque,marmoset,orangutan,panda, antisense antisense A549@1.23487,AG04450@1.4105,BJ@1.28359,GM12878@1.64606,H1HESC@2.09223,HELAS3@4.45179,HEPG2@2.71529,HMEC@0.601477,HSMM@0.402011,HUVEC@2.18112,K562@2.4028,MCF7@3.18247,NHEK@1.24229,NHLF@0.25325,SKNSHRA@1.82614, 0 0 0 0 ENSG00000236719.2 ENST00000442621.1 chr1:180528112-180535654 3 1486 6052 intergenic 1.09 1 0,1,0 0 0,0,0 27.0834454912517 8.60327164573695 0 13.8479138627187 5.80700594844679 3.945 17.2476446837147 7.28965631196299 13.09 0 0 chimp,elephant,human,marmoset,orangutan, lincRNA lincRNA A549@0.009541,AG04450@0.0090315,BJ@0.030445,GM12878@0.170497,H1HESC@0,HELAS3@0.004657,HEPG2@0.02612,HMEC@0.021999,HSMM@0.76378,HUVEC@0.0097975,K562@0.0258505,MCF7@0.008224,NHEK@0.002656,NHLF@0.0052415,SKNSHRA@0, 0 0 0 0 ENSG00000225857.1 ENST00000434447.1 chr1:180875787-180878302 4 539 1970 intergenic -1.25 0 0,0,0 0 0,0,0 0 0 10.12 1.41929499072356 0.517766497461929 15.255 1.44155844155844 1.75939086294416 15.705 0 0 chimp,cow,human,macaque,marmoset,orangutan, lincRNA lincRNA A549@0.0750635,AG04450@0.004337,BJ@0.0059595,GM12878@0.021553,H1HESC@0.0038205,HELAS3@0.0482925,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0.012828,MCF7@0.022719,NHEK@0.00971433,NHLF@0,SKNSHRA@0.031923, 0 0 0 0 ENSG00000225857.1 ENST00000422858.1 chr1:180876937-180878078 4 440 695 intergenic -1.25 1 1,1,1 0 0,0,0 0 0 0 0 0 0 0 0 2.43 0 0 chimp,human,macaque,marmoset,orangutan, lincRNA lincRNA A549@0.0750635,AG04450@0.004337,BJ@0.0059595,GM12878@0.021553,H1HESC@0.0038205,HELAS3@0.0482925,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0.012828,MCF7@0.022719,NHEK@0.00971433,NHLF@0,SKNSHRA@0.031923, 0 0 0 0 ENSG00000232586.1 ENST00000415647.1 chr1:180918835-180924023 2 1438 3748 exonic 0.62 1 1,1,1 0 0,0,0 54.6759388038943 0 0 44.9367176634214 0 0 50.4116828929068 0 0 0 0 chimp,horse,human,macaque,marmoset,orangutan,panda, lincRNA processed_transcript A549@0.410367,AG04450@0.331813,BJ@0.525234,GM12878@0.745953,H1HESC@0.835097,HELAS3@0.881476,HEPG2@2.04286,HMEC@0.334657,HSMM@0.527173,HUVEC@0.758186,K562@0.743208,MCF7@1.29867,NHEK@0.721883,NHLF@0.898937,SKNSHRA@1.29672, 0 0 0 0 ENSG00000237292.1 ENST00000435023.1 chr1:181143620-181151344 3 539 7181 intergenic 1.70 1 0,0,1 0 0,0,0 0 3.94708257902799 0 0 4.94541150257624 0 0 7.8483498120039 0 0 0 human,macaque,marmoset,orangutan, lincRNA lincRNA A549@0.004005,AG04450@0,BJ@0.009016,GM12878@0.116464,H1HESC@0.007655,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0.0084115,HUVEC@0.013483,K562@0.0045315,MCF7@0.0074325,NHEK@0,NHLF@0,SKNSHRA@0.009324, 0 0 0 0 ENSG00000237292.1 ENST00000438428.1 chr1:181144473-181151343 3 538 6328 intergenic -0.39 1 0,0,1 0 0,0,0 0 4.47914032869785 0 0 5.6120417193426 0 0 8.90628950695322 0 0 0 human,macaque,orangutan, lincRNA lincRNA A549@0.004005,AG04450@0,BJ@0.009016,GM12878@0.116464,H1HESC@0.007655,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0.0084115,HUVEC@0.013483,K562@0.0045315,MCF7@0.0074325,NHEK@0,NHLF@0,SKNSHRA@0.009324, 0 0 0 0 ENSG00000225359.1 ENST00000456771.1 chr1:181159607-181160285 2 530 146 intergenic 0.62 1 0,0,0 0 0,0,0 0 0 0 7.69811320754717 0 3.156 7.8188679245283 0 5.614 0 0 chimp,cow,horse,human,macaque,marmoset,orangutan,panda,pig, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000179452.2 ENST00000319701.2 chr1:181205524-181207740 3 256 1956 intergenic -5.77 0 0,0,0 0 0,0,0 0 0 0 21.47265625 1.4340490797546 6.311 23.26953125 1.45654396728016 16.783 0 0 chimp,human,macaque,marmoset,orangutan,pig, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0.10301,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0.00876, 0 0 0 0 ENSG00000224810.1 ENST00000411509.1 chr1:182031812-182038388 3 2460 4112 intergenic 1.65 0 0,0,0 0 0,0,0 6.95772357723577 1.01653696498054 45.124 3.00731707317073 1.32684824902724 28.197 37.3227642276423 2.24513618677043 30.322 0 0 chimp,dog,elephant,human,macaque,marmoset,orangutan, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0.017773,H1HESC@0.0590015,HELAS3@0.016947,HEPG2@0.0648155,HMEC@0,HSMM@0,HUVEC@0,K562@0.002174,MCF7@0.0016695,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000225982.1 ENST00000428646.1 chr1:182055686-182059247 3 1142 2415 intergenic 0.92 0 0,1,1 0 0,0,0 0 0 0 0 7.12795031055901 0 1.91506129597198 7.31221532091097 0 0 0 cat,chimp,cow,elephant,horse,human,macaque,orangutan,panda, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0.0909855,H1HESC@0.107072,HELAS3@0.0564025,HEPG2@0,HMEC@0.067946,HSMM@0,HUVEC@0,K562@0,MCF7@0.063849,NHEK@0.0610783,NHLF@0,SKNSHRA@0.0093965, 0 0 0 0 ENSG00000232309.1 ENST00000412174.1 chr1:182096432-182097800 3 625 739 intergenic -9.06 1 0,0,0 0 0,0,0 0 0 135.915 5.304 0 127.411 5.6576 3.28822733423545 121.973 0 0 chimp,horse,human,macaque,marmoset,orangutan,panda, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0.008457,H1HESC@0,HELAS3@0,HEPG2@0.0217725,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000228918.1 ENST00000426309.1 chr1:182098445-182213534 17 2614 112443 intergenic 2.87 0 0,0,0 0 0,0,0 40.831675592961 5.48834520601549 0 38.2899770466718 11.9451811139866 0 37.5359602142311 13.3353521339701 0 0 0 chimp,human,marmoset,orangutan, processed_transcript processed_transcript A549@0.0023595,AG04450@0,BJ@0,GM12878@0.019769,H1HESC@0.0025465,HELAS3@0.0301435,HEPG2@0.134892,HMEC@0,HSMM@0.001733,HUVEC@0,K562@0.0296785,MCF7@0.01229,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000228918.1 ENST00000420760.1 chr1:182159255-182173160 2 259 13644 intergenic 2.87 1 0,1,0 0 0,0,0 0 0 0 0 1.47288185282908 0 0 6.92604807974201 0 0 0 chimp,human,macaque,marmoset,orangutan, processed_transcript processed_transcript A549@0.0023595,AG04450@0,BJ@0,GM12878@0.019769,H1HESC@0.0025465,HELAS3@0.0301435,HEPG2@0.134892,HMEC@0,HSMM@0.001733,HUVEC@0,K562@0.0296785,MCF7@0.01229,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000228918.1 ENST00000449842.1 chr1:182173080-182283196 3 568 109544 intergenic 0.28 1 0,0,0 0 0,0,0 0 3.56999014094793 0 0 6.82342255166874 0 0 7.8111900240999 0 0 0 cat,chimp,dog,elephant,horse,human,macaque,marmoset,orangutan,panda, processed_transcript processed_transcript A549@0.0023595,AG04450@0,BJ@0,GM12878@0.019769,H1HESC@0.0025465,HELAS3@0.0301435,HEPG2@0.134892,HMEC@0,HSMM@0.001733,HUVEC@0,K562@0.0296785,MCF7@0.01229,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000203729.4 ENST00000367563.3 chr1:182376756-182383950 4 736 6452 intergenic 4.88 0 0,0,0 0 0,0,0 47.5733695652174 23.2114073155611 0 27.2486413043478 17.1766893986361 0 23.2622282608696 13.7408555486671 0 0 0 chimp,dog,human,macaque,marmoset,orangutan,panda, lincRNA lincRNA A549@0.016779,AG04450@0.008715,BJ@0,GM12878@0.0035885,H1HESC@0,HELAS3@0,HEPG2@0.03536,HMEC@0,HSMM@0,HUVEC@0.0252605,K562@0,MCF7@0.0054955,NHEK@0.001725,NHLF@0,SKNSHRA@0.0181025, 0 0 0 0 ENSG00000121446.10 ENST00000426890.1 chr1:182419256-182441535 7 582 21685 intergenic -9.25 0 0,0,0 0 0,0,1 205.407216494845 1.92773806778879 0 349.883161512027 1.84998847129352 5.659 291.352233676976 2.17537468296057 6.437 0 0 cat,chimp,cow,dog,elephant,guinea_pig,horse,human,macaque,marmoset,mouse,opossum,orangutan,panda, antisense antisense A549@0,AG04450@0.001137,BJ@0.001184,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000121446.10 ENST00000367561.5 chr1:182419257-182457883 8 2036 36576 intergenic 52.53 0 0,0,0 0 0,0,1 127.329567779961 1.9554625984252 0 218.007858546169 2.06239063867017 5.659 203.841355599214 3.11753608923885 6.437 0 0 cat,chimp,cow,dog,elephant,guinea_pig,horse,human,macaque,marmoset,mouse,orangutan,panda,pig,rat, antisense retained_intron A549@0,AG04450@0.001137,BJ@0.001184,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000121446.10 ENST00000427189.1 chr1:182419268-182429262 5 538 9448 intergenic -9.25 0 0,0,0 0 0,0,1 139.10594795539 2.54276037256562 0 263.736059479554 3.25476291278578 5.659 235.838289962825 3.71771803556308 6.437 0 0 cat,chimp,cow,elephant,guinea_pig,horse,human,macaque,marmoset,orangutan,panda,rat, antisense antisense A549@0,AG04450@0.001137,BJ@0.001184,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000121446.10 ENST00000542961.1 chr1:182419281-182523785 20 3134 101332 intergenic 40.63 0 0,0,0 0 0,0,1 116.468091895341 1.01770418031816 0 200.240587109126 1.73930249082225 5.659 214.099872367581 3.06731338570244 6.437 0 0 cat,chimp,cow,dog,elephant,guinea_pig,horse,human,macaque,marmoset,mouse,opossum,orangutan,panda, antisense antisense A549@0,AG04450@0.001137,BJ@0.001184,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000121446.10 ENST00000294854.8 chr1:182419281-182529693 22 3674 106696 intergenic 42.00 1 0,0,0 0 0,0,1 88.0552531301034 1.36293769213466 0 160.638268916712 2.11438104521257 5.659 177.958083832335 3.24868786083827 6.437 0 0 cat,chimp,cow,dog,elephant,horse,human,macaque,marmoset,mouse,opossum,orangutan,panda, antisense antisense A549@0,AG04450@0.001137,BJ@0.001184,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000121446.10 ENST00000416676.1 chr1:182419284-182458196 8 700 38198 intergenic 9.54 0 0,0,0 0 0,0,1 181.254285714286 5.36606628619299 0 301.388571428571 8.18516676265773 5.659 284.067142857143 8.79716215508665 6.437 0 0 cat,chimp,cow,dog,elephant,guinea_pig,horse,human,macaque,marmoset,mouse,orangutan,panda,pig,rat, antisense antisense A549@0,AG04450@0.001137,BJ@0.001184,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000121446.10 ENST00000422241.1 chr1:182419284-182458243 8 718 38227 intergenic 1.18 0 0,0,0 0 0,0,1 119.955431754875 6.68810003400738 0 238.062674094707 9.5140607424072 5.659 220.739554317549 10.1339890653203 6.437 0 0 chimp,cow,dog,elephant,guinea_pig,horse,human,macaque,marmoset,mouse,orangutan,rat, antisense antisense A549@0,AG04450@0.001137,BJ@0.001184,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000121446.10 ENST00000447374.1 chr1:182422517-182440510 5 550 17435 intergenic -4.58 0 0,0,0 0 0,0,1 207.116363636364 1.7720103240608 0 347.567272727273 2.00705477487812 0 289.721818181818 2.1211356466877 2.916 0 0 chimp,cow,dog,elephant,human,macaque,marmoset,orangutan,panda,pig,rat, antisense antisense A549@0,AG04450@0.001137,BJ@0.001184,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000121446.10 ENST00000437548.1 chr1:182422519-182441622 7 760 18331 intergenic -4.58 0 0,0,0 0 0,0,1 192.9 2.28045387594785 0 294.377631578947 2.10664993726474 0 250.547368421053 2.24723146582292 2.916 0 0 chimp,cow,dog,elephant,guinea_pig,horse,human,macaque,marmoset,mouse,orangutan,panda, antisense antisense A549@0,AG04450@0.001137,BJ@0.001184,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000121446.10 ENST00000444367.1 chr1:182423105-182441740 4 482 18147 intergenic -9.25 0 0,0,0 0 0,0,1 273.854771784232 4.63420951121397 0.239 394.331950207469 5.33427012729377 2.962 363.0622406639 4.39973549346999 3.143 0 0 chimp,cow,dog,elephant,guinea_pig,horse,human,macaque,marmoset,mouse,opossum,orangutan,panda,pig,rabbit,rat, antisense antisense A549@0,AG04450@0.001137,BJ@0.001184,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000121446.10 ENST00000415960.1 chr1:182443666-182529734 16 2059 83979 intergenic 14.65 1 0,0,0 0 0,0,1 40.1335599805731 0.980316507698353 87.425 97.1442447790189 1.69308993915145 175.568 133.050995628946 3.30043225091987 179.809 0 0 chimp,cow,dog,elephant,horse,human,macaque,marmoset,mouse,orangutan,panda, antisense antisense A549@0,AG04450@0.001137,BJ@0.001184,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000121446.10 ENST00000443996.1 chr1:182457418-182529693 15 2107 70140 intergenic 5.79 1 0,0,0 0 0,0,1 50.1983863312767 0.450570287995438 0 95.5685809207404 1.59483889364129 4.054 130.335548172757 3.06221842030225 5.262 0 0 chimp,cow,dog,elephant,horse,human,macaque,marmoset,mouse,orangutan,panda, antisense antisense A549@0,AG04450@0.001137,BJ@0.001184,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000121446.10 ENST00000436031.1 chr1:182462090-182529734 12 5660 61962 intergenic 20.54 1 0,0,0 0 0,0,1 14.0420494699647 0.510038410638779 0 33.9975265017668 1.2490881508021 0 43.9019434628975 2.71254962719086 2.187 0 0 chimp,horse,human,macaque,marmoset,orangutan,panda, antisense retained_intron A549@0,AG04450@0.001137,BJ@0.001184,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000121446.10 ENST00000456971.1 chr1:182490287-182501926 5 604 11027 intergenic 0.10 0 0,0,0 0 0,0,1 80.4271523178808 1.71968803845107 0 116.455298013245 1.92654393760769 0 125.201986754967 2.35730479731568 0 0 0 cat,chimp,cow,dog,elephant,guinea_pig,horse,human,macaque,marmoset,mouse,orangutan,panda,pig,rabbit,rat, antisense antisense A549@0,AG04450@0.001137,BJ@0.001184,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000227181.1 ENST00000435492.1 chr1:182681997-182683679 2 257 1423 intergenic -8.61 0 0,1,1 0 0,0,0 0 45.3267744202389 78.422 0 28.7863668306395 130.447 0 30.1848208011244 116.059 0 0 chimp,dog,horse,human,macaque,marmoset,orangutan, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000247330.1 ENST00000444141.2 chr1:182806325-182808726 2 1023 1376 exonic -0.55 0 1,1,1 0 0,0,0 0 0 0 13.2609970674487 2.20639534883721 3.156 13.9648093841642 1.98837209302326 1.554 1 1 chimp,human,macaque,marmoset,orangutan, lincRNA lincRNA A549@0.34494,AG04450@0.091923,BJ@0.053779,GM12878@0.218271,H1HESC@0.559636,HELAS3@0.468282,HEPG2@0.228492,HMEC@0.16778,HSMM@0.158626,HUVEC@0.053404,K562@0.49251,MCF7@0.351382,NHEK@0.111496,NHLF@0.209648,SKNSHRA@0.330875, 0 0 0 0 ENSG00000224468.1 ENST00000457852.1 chr1:183107514-183110439 3 521 2400 intronic -6.09 0 0,0,0 0 0,0,0 0 30.94875 100.316 0 36.4820833333333 68.454 0 42.5925 73.226 0 0 chimp,dog,horse,human,macaque,marmoset,orangutan, processed_transcript processed_transcript A549@0.0442385,AG04450@0.054428,BJ@0.0418185,GM12878@0.0203,H1HESC@0.029846,HELAS3@0.0370885,HEPG2@0.0503725,HMEC@0,HSMM@0,HUVEC@0.0173055,K562@0,MCF7@0,NHEK@0.022195,NHLF@0.009962,SKNSHRA@0.052956, 0 0 0 0 ENSG00000232860.2 ENST00000421703.1 chr1:183430009-183440881 5 2215 8649 intergenic 5.88 1 0,0,1 0 0,0,0 12.9458239277652 6.48398658804486 201.326 24.3042889390519 6.1780552665048 248.732 23.3304740406321 8.36778818360504 279.808 0 0 chimp,elephant,horse,human,macaque,marmoset,orangutan, lincRNA processed_transcript A549@0.060569,AG04450@0.018463,BJ@0.0237615,GM12878@0.210433,H1HESC@0.05817,HELAS3@0.196914,HEPG2@0.14874,HMEC@0.005469,HSMM@0.012235,HUVEC@0.054907,K562@0.150088,MCF7@0.185729,NHEK@0.019106,NHLF@0.007882,SKNSHRA@0.03022, 0 0 0 0 ENSG00000232860.2 ENST00000432837.1 chr1:183430881-183440864 5 461 9514 intergenic 0.48 0 0,0,0 0 0,0,0 14.5162689804772 7.77801135169224 205.389 13.4338394793926 9.23439142316586 250.982 12.9804772234273 10.9908555812487 281.432 0 0 chimp,cow,elephant,horse,human,macaque,marmoset,orangutan, lincRNA processed_transcript A549@0.060569,AG04450@0.018463,BJ@0.0237615,GM12878@0.210433,H1HESC@0.05817,HELAS3@0.196914,HEPG2@0.14874,HMEC@0.005469,HSMM@0.012235,HUVEC@0.054907,K562@0.150088,MCF7@0.185729,NHEK@0.019106,NHLF@0.007882,SKNSHRA@0.03022, 0 0 0 0 ENSG00000232860.2 ENST00000532582.1 chr1:183439155-183441400 1 2245 0 intergenic 7.42 1 0,0,0 0 0,0,0 21.1314031180401 0 199.52 55.0935412026726 0 220.259 64.6650334075724 0 220.023 0 0 chimp,cow,elephant,horse,human,macaque,marmoset,orangutan,panda,pig, lincRNA TEC A549@0.060569,AG04450@0.018463,BJ@0.0237615,GM12878@0.210433,H1HESC@0.05817,HELAS3@0.196914,HEPG2@0.14874,HMEC@0.005469,HSMM@0.012235,HUVEC@0.054907,K562@0.150088,MCF7@0.185729,NHEK@0.019106,NHLF@0.007882,SKNSHRA@0.03022, 0 0 0 0 ENSG00000227554.1 ENST00000451829.1 chr1:183723553-183724072 3 361 154 intronic 0 1 0,1,0 0 0,0,0 0 0 0 0 0 0 0 0 0 0 0 chimp,horse,human,macaque,marmoset,orangutan,pig, antisense antisense A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0.012466, 0 0 0 0 ENSG00000231791.1 ENST00000449525.1 chr1:184298205-184301960 2 331 3422 intergenic -6.43 0 0,0,0 0 0,0,0 0 51.5853302162478 0 52.5468277945619 23.1171829339568 0 55.1208459214502 21.6320864991233 0 0 0 cat,chimp,horse,human,macaque,marmoset,orangutan,panda, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000230470.1 ENST00000414377.1 chr1:184377471-184381494 2 421 3600 intronic -4.66 0 0,0,0 0 0,0,0 87.4251781472684 8.47777777777778 106.594 0 8.68138888888889 41.325 0 10.0633333333333 41.384 0 0 chimp,cow,elephant,guinea_pig,horse,human,macaque,marmoset,orangutan,pig, sense_intronic sense_intronic A549@0,AG04450@0.088373,BJ@0.0198565,GM12878@0,H1HESC@0.034611,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0.133209, 0 0 0 0 ENSG00000228183.1 ENST00000457764.1 chr1:185290288-185302200 4 396 11510 intergenic -5.20 0 0,0,0 0 0,0,0 12.1388888888889 0.181581233709818 0 0 2.35412684622068 0 63.6363636363636 7.34778453518679 42.759 0 0 chimp,human,orangutan, lincRNA ambiguous_orf A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000228183.1 ENST00000446901.1 chr1:185292978-185304139 4 631 10524 intergenic -0.07 1 0,0,0 0 0,0,0 0 0 0 0 1.09502090459901 1.275 108.532488114105 6.47063854047891 1.325 0 0 chimp,dog,elephant,horse,human,macaque,marmoset,opossum,orangutan,pig,rabbit,rat, lincRNA ambiguous_orf A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000228183.1 ENST00000423844.1 chr1:185300389-185304171 4 605 3171 intergenic -0.07 0 0,0,0 0 0,0,0 0 0 0 0 0 3.315 113.196694214876 14.5733207190161 3.397 0 0 chimp,elephant,horse,human,macaque,marmoset,mouse,orangutan,pig,rabbit, lincRNA ambiguous_orf A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000228309.1 ENST00000439633.1 chr1:185527511-185534763 3 613 6635 intergenic 1.77 0 0,1,0 0 0,0,0 0 0 0 0 3.23119819140919 0 0 5.33413715146948 0 0 0 chimp,cow,dog,elephant,guinea_pig,horse,human,macaque,marmoset,orangutan,pig, lincRNA lincRNA A549@0,AG04450@0.0052345,BJ@0.042027,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0.021186,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0.008733, 0 0 0 0 ENSG00000232279.1 ENST00000436955.1 chr1:185576316-185597659 5 637 20698 intergenic 2.01 0 0,0,0 0 0,0,0 0 0.811189486906947 0 7.01883830455259 0.332640834863272 7.452 7.41915227629513 0.37047057686733 11.45 0 0 cat,chimp,human,macaque,orangutan, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000224691.1 ENST00000428391.1 chr1:186145946-186146434 2 351 135 intronic -16.02 0 0,0,1 0 0,0,0 0 0 0 0 0 0 0 0 0 0 0 chimp,human,macaque,orangutan, antisense antisense A549@0.009554,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 1 96 0 0 ENSG00000229739.1 ENST00000429768.1 chr1:186420213-186420881 2 312 354 intronic 0 0 0,0,0 0 0,0,0 0 0 0 10.3333333333333 16.3276836158192 0 10.4583333333333 16.3276836158192 0 0 0 chimp,cow,horse,human,macaque,marmoset,mouse,orangutan,pig,rabbit, antisense antisense A549@0.0410185,AG04450@0.094876,BJ@0,GM12878@0.147988,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0.01304,HSMM@0.0145195,HUVEC@0,K562@0.0073945,MCF7@0,NHEK@0.008409,NHLF@0,SKNSHRA@0.049887, 0 0 0 0 ENSG00000236030.1 ENST00000458683.1 chr1:187061974-187329455 4 854 266621 intergenic -3.43 0 0,0,1 0 0,0,0 0 11.403010265508 0 0 15.1165099523293 0 0 16.3948001095188 0 0 0 chimp,human,macaque,marmoset,orangutan, lincRNA lincRNA A549@0.0097655,AG04450@0,BJ@0,GM12878@0.132436,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0.183826,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0.0391235, 0 0 0 0 ENSG00000231599.1 ENST00000444887.1 chr1:187412738-187439371 2 288 26343 intergenic -15.76 0 0,0,1 0 0,0,0 0 9.50882587404624 0 0 14.9347454731807 0 0 16.2049500816156 0 0 0 chimp,human,marmoset,orangutan, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0.046969,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0.06698,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0.0214225, 0 0 0 0 ENSG00000231599.1 ENST00000427337.1 chr1:187412760-187446354 3 421 33169 intergenic -15.88 0 0,0,0 0 0,0,0 0 20.2596098766921 0 0 28.7185022159245 0 0 29.08336096958 0 0 0 chimp,dog,elephant,guinea_pig,human,macaque,marmoset,orangutan, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0.046969,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0.06698,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0.0214225, 0 0 0 0 ENSG00000230426.1 ENST00000429725.1 chr1:187610358-187612992 3 2390 240 intergenic -0.65 0 0,1,0 1 0,0,0 0 0 0 0 0 0 0 0 0 0 0 chimp,human,macaque,orangutan, lincRNA lincRNA A549@0.0119635,AG04450@0,BJ@0.0054095,GM12878@0.186629,H1HESC@2.16214,HELAS3@0.295214,HEPG2@0.244124,HMEC@0,HSMM@0,HUVEC@0,K562@0.086175,MCF7@0.003437,NHEK@0.002741,NHLF@0,SKNSHRA@0.019521, 0 0 0 0 ENSG00000225006.1 ENST00000426262.1 chr1:188477669-188505596 4 742 27179 intergenic -1.66 0 0,0,0 0 0,0,0 0 7.01158983038375 0 0 7.98469406527098 0 0 8.27263696236065 0 0 0 chimp,human,macaque,marmoset,orangutan, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0.0065185,K562@0.035001,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000237283.1 ENST00000432976.1 chr1:188674754-188680011 2 731 4524 intergenic -0.09 0 0,1,0 0 0,0,0 0 11.7705570291777 0 0 13.1430150309461 0 0 20.8839522546419 0 0 0 cat,chimp,dog,human,macaque,orangutan, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0.0063955,H1HESC@0,HELAS3@0.0753595,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0.0238405,K562@0.0031675,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0.0129665, 0 0 0 0 ENSG00000238054.1 ENST00000414765.1 chr1:188838608-188856565 2 464 17491 intergenic 6.60 0 0,0,0 0 0,0,0 0 1.63026699445429 0 0 2.20804985421074 0 0 2.78600423074724 0 0 0 chimp,horse,human,macaque,marmoset,orangutan, lincRNA lincRNA A549@0.004658,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@3.29939,HEPG2@0.69657,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0.004412,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000226486.1 ENST00000445072.1 chr1:188874819-189006393 2 782 130790 intergenic -2.18 0 0,0,0 0 0,0,0 0 1.26713051456533 0 0 3.01369370746999 0 0 4.69386038687973 0 0 0 chimp,human,macaque,orangutan, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0.745123,HEPG2@0.476658,HMEC@0,HSMM@0,HUVEC@0,K562@0.009398,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000232212.1 ENST00000419614.1 chr1:189744595-189784048 4 447 39000 intergenic -0.87 0 0,1,0 0 0,0,0 0 0.699025641025641 0 0 2.94453846153846 2.151 0 3.21592307692308 2.331 0 0 chimp,cow,elephant,horse,human,macaque,marmoset,orangutan,panda, lincRNA lincRNA A549@0.059824,AG04450@0.010444,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0.004559,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000238270.1 ENST00000450681.1 chr1:189837131-189837658 2 412 113 intergenic -1.73 0 0,0,1 0 0,0,0 0 0 0 0 0 0 0 0 0 0 0 chimp,human,macaque,marmoset,orangutan, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000225811.1 ENST00000452178.1 chr1:190234028-190331400 5 597 96767 exonic -7.02 0 0,1,0 0 0,0,0 92.8190954773869 2.96151580600825 15.327 76.2881072026801 5.64593301435407 19.008 100.84757118928 7.93168125497329 22.104 0 0 chimp,cow,dog,elephant,horse,human,macaque,marmoset,mouse,opossum,orangutan,panda,rabbit,rat, antisense antisense A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000237457.2 ENST00000436905.1 chr1:190447681-190449865 2 470 1712 intergenic -3.16 1 0,0,0 0 0,0,0 45.7191489361702 13.9322429906542 135.981 18.7765957446809 54.2529205607477 108.416 29.8936170212766 61.5625 140.548 0 0 cat,chimp,cow,dog,elephant,guinea_pig,horse,human,macaque,marmoset,orangutan,panda,pig,rabbit,rat, lincRNA processed_transcript A549@0,AG04450@0.0047485,BJ@0,GM12878@0,H1HESC@0.0424075,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0.014758,MCF7@0.082402,NHEK@0,NHLF@0.004134,SKNSHRA@0.134692, 0 0 0 0 ENSG00000237457.2 ENST00000424735.1 chr1:190448136-190449865 2 524 1203 intergenic -3.16 1 0,1,0 0 0,0,0 0 10.3308395677473 49.69 76.7480916030534 37.691604322527 24.395 92.2729007633588 39.1778886118038 31.163 0 0 cat,chimp,cow,dog,elephant,guinea_pig,horse,human,macaque,marmoset,orangutan,panda,pig,rabbit,rat, lincRNA processed_transcript A549@0,AG04450@0.0047485,BJ@0,GM12878@0,H1HESC@0.0424075,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0.014758,MCF7@0.082402,NHEK@0,NHLF@0.004134,SKNSHRA@0.134692, 0 0 0 0 ENSG00000241505.1 ENST00000417409.1 chr1:190449509-190463427 2 504 13412 intergenic 0 0 0,0,0 0 0,0,0 0 6.53705636743215 12.428 0 6.7520131225768 5.145 4.33928571428571 7.03645988666866 12.978 0 0 cat,chimp,cow,dog,elephant,guinea_pig,horse,human,macaque,marmoset,mouse,orangutan,panda,pig,rabbit,rat, lincRNA processed_transcript A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000231175.1 ENST00000413356.1 chr1:190594020-190770788 5 2211 174549 intergenic 0.23 1 0,0,0 0 0,0,0 0 2.67008118064268 0 0 4.21803046708947 0 0 7.97777128485411 0 0 0 chimp,cow,dog,horse,human,macaque,marmoset,orangutan,panda,pig, processed_transcript processed_transcript A549@0,AG04450@0,BJ@0,GM12878@0.001058,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000233882.1 ENST00000434983.1 chr1:191190289-191197597 2 297 7009 intergenic 0 0 0,0,0 0 0,0,0 0 5.29319446426024 0 0 4.07989727493223 0 0 5.18419175345984 0 0 0 cat,chimp,human,macaque,marmoset,orangutan,panda, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000223344.1 ENST00000432083.1 chr1:191827837-191836090 2 613 7638 intergenic -4.89 0 0,0,0 0 0,0,0 0 0 0 0 0 0 0 0 0 0 0 cat,chimp,cow,dog,guinea_pig,horse,human,macaque,orangutan,panda, lincRNA lincRNA A549@0,AG04450@0.0038445,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000223344.1 ENST00000428569.1 chr1:191827893-191859359 2 581 30883 intergenic -0.11 0 0,0,0 0 0,0,0 0 1.08788006346534 0 0 2.95661043292426 0 0 3.13900851601205 0 0 0 cat,chimp,cow,dog,guinea_pig,horse,human,macaque,marmoset,orangutan,panda,pig, lincRNA lincRNA A549@0,AG04450@0.0038445,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000228215.1 ENST00000430776.1 chr1:191844625-191980390 5 2030 133727 intergenic -2.21 0 0,0,0 0 0,0,0 0 5.31870901164312 0 0 8.07306677036051 0 0 9.30963081501866 0 0 0 chimp,dog,horse,human,macaque,marmoset,orangutan,pig, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0.001011,HUVEC@0.0053145,K562@0.020514,MCF7@0.0060175,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000232498.1 ENST00000434300.1 chr1:192486769-192536347 2 394 49182 intergenic -4.14 0 0,0,0 0 0,0,0 0 3.99817006221788 0 0 3.94528486031475 0 0 4.75218575901753 0 0 0 chimp,cow,dog,elephant,horse,human,macaque,marmoset,orangutan,panda,rabbit, antisense antisense A549@0,AG04450@0.044855,BJ@0.108505,GM12878@0.151852,H1HESC@0.022203,HELAS3@0.454119,HEPG2@1.66302,HMEC@0,HSMM@0.034484,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0.014727,SKNSHRA@0.031262, 0 0 0 0 ENSG00000236069.1 ENST00000457321.1 chr1:192498709-192507232 3 681 7838 intergenic 1.15 0 0,0,0 0 0,0,0 0 0 0 5.21732745961821 2.25287063026282 0 10.3201174743025 2.7241643276346 0 0 0 chimp,human,macaque, lincRNA lincRNA A549@0,AG04450@0.0065535,BJ@0,GM12878@0.0704525,H1HESC@0.003033,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0.038045,HUVEC@0.003555,K562@0,MCF7@0,NHEK@0,NHLF@0.005705,SKNSHRA@0.041046, 129 2 0 0 ENSG00000234871.1 ENST00000451690.1 chr1:192906430-192917387 2 274 10681 intergenic 10.60 0 0,0,0 0 0,0,0 0 0 0 0 7.28995412414568 0 0 8.59142402396779 0 0 0 chimp,elephant,guinea_pig,horse,human,macaque,marmoset,orangutan, lincRNA lincRNA A549@0.160698,AG04450@0.043582,BJ@0.0880385,GM12878@0.199411,H1HESC@0.0316335,HELAS3@0.090233,HEPG2@0.045252,HMEC@0,HSMM@0,HUVEC@0.0446765,K562@0.250208,MCF7@0,NHEK@0.136695,NHLF@0,SKNSHRA@0.239489, 0 0 0 0 ENSG00000232077.1 ENST00000420807.1 chr1:193273875-193335083 4 775 60427 intergenic 0.76 1 0,0,0 0 0,0,0 0 14.5267347377828 0 5.42967741935484 11.7330166978338 0 12.1045161290323 14.6297516011055 0 0 0 chimp,cow,guinea_pig,human,macaque,marmoset,orangutan,panda,rabbit,rat, lincRNA lincRNA A549@0.0027865,AG04450@0.055393,BJ@0.0249425,GM12878@0.0531135,H1HESC@0.002663,HELAS3@0.0734865,HEPG2@0.024511,HMEC@0.010513,HSMM@0.095373,HUVEC@0.0038205,K562@0.024306,MCF7@0.007918,NHEK@0.0839293,NHLF@0.0322555,SKNSHRA@0.0145775, 0 0 0 0 ENSG00000226640.1 ENST00000448412.1 chr1:193648024-193696313 3 546 47739 intergenic 0.57 0 0,0,0 0 0,0,0 88.46336996337 12.8224302980791 9.43 95.9358974358974 19.6092502984981 8.098 130.772893772894 21.2772156936677 8.515 0 0 chimp,cow,dog,elephant,guinea_pig,horse,human,macaque,marmoset,mouse,orangutan,rabbit,rat, lincRNA lincRNA A549@0,AG04450@0.016177,BJ@0,GM12878@0.0251645,H1HESC@0,HELAS3@0.0096685,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0.01013, 0 0 0 0 ENSG00000237011.1 ENST00000447056.1 chr1:193653376-193657559 3 847 3332 intergenic -2.12 1 0,0,0 0 0,0,0 0 23.7599039615846 0 31.0153482880756 63.1332533013205 0 47.8701298701299 64.5291116446579 0 0 0 chimp,cow,elephant,horse,human,macaque,marmoset,orangutan,panda,rat, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000227240.1 ENST00000454538.1 chr1:194118603-194167824 3 829 48388 intergenic -4.47 1 0,0,0 0 0,0,0 0 5.36866578490535 0 0 6.8171034140696 0 0 34.829151855832 0 0 0 cat,chimp,cow,dog,elephant,guinea_pig,horse,human,macaque,marmoset,orangutan,panda,pig, processed_transcript processed_transcript A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000231714.1 ENST00000435554.1 chr1:194320073-194321556 2 438 1043 intergenic -8.21 0 0,1,0 0 0,0,0 0 0 0 0 1.60402684563758 0 0 3.72770853307766 0 0 0 chimp,human,macaque,marmoset,orangutan, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0.01862,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000251335.1 ENST00000513624.1 chr1:195727482-195732530 3 1398 3646 intergenic -3.42 0 0,0,0 0 0,0,0 0 2.63686231486561 0 5.37052932761087 3.89851892484915 0 6.75393419170243 7.12863411958311 0 0 0 chimp,human,macaque,orangutan,rabbit, lincRNA lincRNA A549@0.007913,AG04450@0,BJ@0,GM12878@0,H1HESC@0.0063635,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0.007713,MCF7@0.0087405,NHEK@0,NHLF@0,SKNSHRA@0.003239, 0 0 0 0 ENSG00000227421.1 ENST00000430519.1 chr1:196014126-196030203 2 619 15456 intergenic -9.11 0 0,1,0 0 0,0,0 0 0 0 0 0.499611801242236 0 0 0.498641304347826 0 0 0 chimp,cow,elephant,guinea_pig,horse,human,macaque,marmoset,orangutan,pig, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0.003107,SKNSHRA@0.007307, 0 0 0 0 ENSG00000230260.1 ENST00000422250.1 chr1:197407106-197416599 4 544 8943 exonic 0.48 0 0,0,0 0 0,0,0 137.933823529412 17.4264788102426 0 106.663602941176 18.0741361959074 0 162.290441176471 21.8444593536844 0 0 0 cat,chimp,elephant,horse,human,macaque,marmoset,mouse,orangutan,panda, antisense antisense A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0.084449,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000224901.1 ENST00000440885.1 chr1:197726449-197731095 2 245 4399 intronic 0 1 0,0,0 0 0,0,0 0 8.6144578313253 0 136.808163265306 4.9029324846556 0 136.195918367347 5.75676290065924 0 0 0 chimp,cow,guinea_pig,horse,human,macaque,marmoset,orangutan,rabbit, antisense antisense A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000223881.1 ENST00000429469.1 chr1:198566854-198567998 2 361 781 intergenic 0 0 1,1,1 0 0,0,0 0 0 0 0 0 1.912 0 0 1.944 0 0 chimp,dog,elephant,horse,human,macaque,marmoset,orangutan,rabbit, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@3.06266,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0.041948,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000229933.1 ENST00000413577.1 chr1:198626682-198636190 3 413 9091 intronic -4.52 1 0,1,1 0 0,0,0 0 1.66406335936641 0 38.4745762711864 2.56825431745683 0 40.4624697336562 4.19227807721923 0 0 0 cat,chimp,cow,dog,horse,human,macaque,marmoset,orangutan,panda, antisense ambiguous_orf A549@0,AG04450@0,BJ@0.228082,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0.0046905,SKNSHRA@0, 0 0 0 0 ENSG00000229989.2 ENST00000412162.1 chr1:198776622-198796345 2 940 18781 intergenic -6.02 0 0,1,0 0 0,0,0 0 5.2054203716522 0 0 4.37761567541664 0 0 4.73419945689793 0 0 0 chimp,horse,human,macaque,marmoset,orangutan,rabbit, lincRNA processed_transcript A549@1.2204,AG04450@3.94355,BJ@1.1372,GM12878@1.91203,H1HESC@0.0545455,HELAS3@0.082846,HEPG2@0.0863995,HMEC@0.037448,HSMM@0.109767,HUVEC@5.24799,K562@0,MCF7@0.317038,NHEK@1.01168,NHLF@0.0940885,SKNSHRA@1.19259, 0 0 0 0 ENSG00000229989.2 ENST00000432296.1 chr1:198776787-198906539 3 927 128821 intergenic 3.38 0 0,1,0 0 0,0,0 118.69687162891 28.778739491232 179.998 41.2621359223301 20.3956497775984 166.607 44.1456310679612 22.3170601066596 181.731 0 0 chimp,cow,dog,guinea_pig,horse,human,macaque,marmoset,orangutan,rabbit,rat, lincRNA processed_transcript A549@1.2204,AG04450@3.94355,BJ@1.1372,GM12878@1.91203,H1HESC@0.0545455,HELAS3@0.082846,HEPG2@0.0863995,HMEC@0.037448,HSMM@0.109767,HUVEC@5.24799,K562@0,MCF7@0.317038,NHEK@1.01168,NHLF@0.0940885,SKNSHRA@1.19259, 0 0 0 0 ENSG00000229989.2 ENST00000436880.1 chr1:198869147-198906558 2 754 36655 intergenic 3.38 0 0,1,0 0 0,0,0 217.89124668435 65.6532533078707 168.636 172.220159151194 43.3262037921156 155.872 159.655172413793 45.5472104760606 170.369 0 0 cat,chimp,cow,dog,elephant,guinea_pig,horse,human,macaque,marmoset,mouse,opossum,orangutan,panda,pig,rabbit,rat, lincRNA processed_transcript A549@1.2204,AG04450@3.94355,BJ@1.1372,GM12878@1.91203,H1HESC@0.0545455,HELAS3@0.082846,HEPG2@0.0863995,HMEC@0.037448,HSMM@0.109767,HUVEC@5.24799,K562@0,MCF7@0.317038,NHEK@1.01168,NHLF@0.0940885,SKNSHRA@1.19259, 0 0 0 0 ENSG00000225172.1 ENST00000422480.1 chr1:198952450-198954330 3 832 1044 intergenic -3.99 0 0,0,0 0 0,0,0 0 0 27.413 0 0 5.26 0 0 16.301 0 0 chimp,human,macaque,marmoset,orangutan, lincRNA lincRNA A549@0,AG04450@0.0026845,BJ@0,GM12878@0.002556,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0.002244,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0.0067495,SKNSHRA@0, 0 0 0 0 ENSG00000225172.1 ENST00000440162.1 chr1:198952753-198954529 3 914 858 intergenic -3.99 0 0,1,0 0 0,0,0 0 0 0 0 0 0 0 0 0 0 0 chimp,horse,human,macaque,marmoset,orangutan,panda, lincRNA lincRNA A549@0,AG04450@0.0026845,BJ@0,GM12878@0.002556,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0.002244,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0.0067495,SKNSHRA@0, 0 0 0 0 ENSG00000233410.1 ENST00000427439.1 chr1:198975169-198990166 3 1782 13211 intergenic -3.83 0 0,0,0 0 0,0,0 0 18.323593974718 0 0 12.0860646431004 18.342 0 15.1983195821664 19.098 0 0 chimp,dog,guinea_pig,horse,human,macaque,marmoset,orangutan, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0.022293,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0.0031155, 0 0 0 0 ENSG00000235492.1 ENST00000432488.1 chr1:198985262-199045864 3 659 59939 intergenic -3.07 0 0,0,0 0 0,0,0 73.9089529590288 4.77583876941557 0 57.2625189681335 5.00565575001251 13.864 62.9529590288316 6.3995728991141 15.29 0 0 chimp,cow,dog,elephant,guinea_pig,horse,human,macaque,marmoset,mouse,orangutan,rat, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000231718.1 ENST00000452199.1 chr1:199117726-199362435 4 2292 242411 intergenic 2.44 0 0,1,0 0 0,0,0 0 14.8619988366865 0 0 12.4498846999517 2.232 0 21.537776751055 2.331 0 0 chimp,human,macaque,marmoset,orangutan, processed_transcript processed_transcript A549@0,AG04450@0,BJ@0,GM12878@0.0098195,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0.0009385,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000230623.2 ENST00000427825.1 chr1:200443048-200447421 2 505 3866 intergenic 2.18 0 0,0,1 0 0,0,0 52.190099009901 158.990688049664 0 3.53465346534653 316.26125193999 0 0 75.3259182617693 0 0 0 cat,chimp,elephant,guinea_pig,horse,human,macaque,marmoset,orangutan, lincRNA lincRNA A549@0,AG04450@0.004421,BJ@0.014319,GM12878@0.0103915,H1HESC@5.51258,HELAS3@0,HEPG2@0.012607,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0.005208,NHLF@0.0228775,SKNSHRA@0, 0 0 0 0 ENSG00000232257.1 ENST00000422640.1 chr1:200638635-200663378 3 733 24006 exonic -6.74 0 1,1,1 0 0,0,0 0 6.13942347746397 0 0 2.2310255769391 0 1.65757162346521 2.98521203032575 19.578 0 0 chimp,human,macaque,marmoset,orangutan, antisense ambiguous_orf A549@0.136188,AG04450@0.180362,BJ@0.0374295,GM12878@0.133525,H1HESC@0.185482,HELAS3@0.0657535,HEPG2@0.003706,HMEC@0.478448,HSMM@0.0185835,HUVEC@0.089788,K562@0.625558,MCF7@0.072137,NHEK@0.5512,NHLF@0.0368795,SKNSHRA@0.89972, 0 0 0 0 ENSG00000229191.1 ENST00000446333.1 chr1:200993077-200996918 2 2495 1344 intergenic 2.11 0 0,1,1 1 0,0,0 37.4681362725451 24.9910714285714 157.949 40.5366733466934 45.6205357142857 179.401 41.2741482965932 47.0811011904762 163.202 0 0 cat,chimp,dog,guinea_pig,human,macaque,marmoset,mouse,orangutan,rabbit, lincRNA processed_transcript A549@0.0301385,AG04450@0.0018405,BJ@0,GM12878@0.120259,H1HESC@4.63998,HELAS3@0.0332395,HEPG2@0.027469,HMEC@0.00328,HSMM@0,HUVEC@0.0105905,K562@0.782328,MCF7@0.000588,NHEK@0,NHLF@0.021146,SKNSHRA@0.0209325, 0 0 0 0 ENSG00000229191.1 ENST00000458003.1 chr1:200993089-200997920 2 3494 1335 intergenic 2.11 1 0,1,1 1 0,0,0 29.5598168288495 25.1595505617978 157.949 32.8116771608472 45.9280898876404 179.401 33.3806525472238 47.3985018726592 163.202 0 0 chimp,human,marmoset, lincRNA processed_transcript A549@0.0301385,AG04450@0.0018405,BJ@0,GM12878@0.120259,H1HESC@4.63998,HELAS3@0.0332395,HEPG2@0.027469,HMEC@0.00328,HSMM@0,HUVEC@0.0105905,K562@0.782328,MCF7@0.000588,NHEK@0,NHLF@0.021146,SKNSHRA@0.0209325, 0 0 0 0 ENSG00000234132.1 ENST00000415359.1 chr1:201004224-201012201 4 504 7467 intronic -0.61 1 0,0,0 0 0,0,0 0 8.65474755591268 0 0 12.9500468729075 3.472 0 10.563948038034 3.578 0 0 chimp,elephant,human,macaque,marmoset,panda, antisense antisense A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0.044768,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000237688.1 ENST00000412995.1 chr1:201084904-201096312 2 201 11205 intergenic 0 0 0,0,0 0 0,0,0 0 5.11289602855868 73.968 123.383084577114 0.870325747434181 54.876 1.41293532338308 1.64854975457385 56.165 0 0 chimp,horse,human,macaque,orangutan, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000229821.1 ENST00000453155.1 chr1:201191241-201192251 2 769 239 exonic 6.27 0 0,0,0 0 0,0,0 0 0 0 23.3133940182055 0 0 26.1417425227568 0 0 0 0 cat,chimp,elephant,horse,human,macaque,marmoset,mouse,orangutan,panda,rat, antisense antisense A549@0.0043745,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000224818.1 ENST00000430471.1 chr1:201433511-201434274 2 596 165 intergenic -7.93 1 0,0,1 0 0,0,0 0 0 67.875 0 0 78.531 0 0 73.064 0 0 cat,chimp,human,macaque,marmoset,orangutan,panda, lincRNA lincRNA A549@3.48861,AG04450@6.57437,BJ@5.25125,GM12878@2.65754,H1HESC@1.44473,HELAS3@2.43041,HEPG2@3.29664,HMEC@4.57393,HSMM@10.3423,HUVEC@0.958616,K562@0,MCF7@5.97655,NHEK@7.75269,NHLF@5.42407,SKNSHRA@3.94551, 0 0 0 0 ENSG00000224536.1 ENST00000454651.1 chr1:201476369-201502736 2 338 26027 exonic -1.39 1 1,1,1 1 0,0,0 4.30769230769231 4.87132593076421 79.359 0 3.33373035693703 59.048 0 23.8613363046068 47.945 0 0 chimp,human,macaque,marmoset,orangutan, processed_transcript processed_transcript A549@0.023264,AG04450@0,BJ@0,GM12878@0.026242,H1HESC@0,HELAS3@0.015646,HEPG2@0,HMEC@0,HSMM@0.0306415,HUVEC@0,K562@0,MCF7@0.025795,NHEK@0,NHLF@0.0106145,SKNSHRA@0.0124015, 0 0 0 0 ENSG00000223396.2 ENST00000441932.1 chr1:201487831-201499602 2 2327 9442 intergenic 13.79 0 0,1,1 0 0,0,0 0 0 0 0 1.14202499470451 0 159.971637301246 17.2673162465579 0 0 0 human,macaque, processed_transcript processed_transcript A549@0.697596,AG04450@0.0987705,BJ@0.154272,GM12878@0.460326,H1HESC@0.0383705,HELAS3@0.515066,HEPG2@0.0443385,HMEC@0.049227,HSMM@0.14875,HUVEC@0.118891,K562@0.110914,MCF7@0.616027,NHEK@0.0770707,NHLF@0.0555735,SKNSHRA@0.213926, 0 0 0 0 ENSG00000236390.1 ENST00000449492.1 chr1:201642233-201643272 2 577 460 intronic 5.32 1 0,0,0 0 0,0,0 106.476603119584 26.1869565217391 62.429 51.5077989601387 0 54.903 52.2928942807626 0 53.282 0 0 cat,elephant,human,macaque,marmoset,orangutan,panda,pig,rabbit, antisense antisense A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000231871.1 ENST00000413035.1 chr1:201657387-201798687 3 836 140460 exonic 3.64 0 0,1,1 1 0,0,0 233.456937799043 53.7015449238218 0 225.788277511962 32.6166737861313 17.784 270.260765550239 36.0328492097394 19.125 0 0 cat,chimp,cow,dog,elephant,guinea_pig,human,macaque,marmoset,mouse,opossum,orangutan,panda,pig,rabbit,rat, antisense antisense A549@0.046305,AG04450@0.039303,BJ@0.0649195,GM12878@0.049693,H1HESC@0.126573,HELAS3@0.130858,HEPG2@0.179237,HMEC@0.140875,HSMM@0.023192,HUVEC@0.325661,K562@0.060834,MCF7@0.0582235,NHEK@0.0105787,NHLF@0.0185275,SKNSHRA@0.113661, 0 0 0 0 ENSG00000235121.1 ENST00000429443.1 chr1:201692422-201706634 2 1807 12403 intronic 1.61 0 0,0,0 0 0,0,0 81.3923630326508 18.2008385068129 90.736 41.3436635307139 12.4856889462227 57.536 47.4543442169341 12.9205031040877 56.859 0 0 cat,chimp,dog,horse,human,macaque,marmoset,orangutan,panda, antisense antisense A549@0.0011475,AG04450@0.017016,BJ@0.008579,GM12878@0,H1HESC@0.117811,HELAS3@0.087168,HEPG2@0.013396,HMEC@0.00262,HSMM@0.0101235,HUVEC@0.020688,K562@0.00338,MCF7@0.173706,NHEK@0.002222,NHLF@0,SKNSHRA@0.0841705, 0 0 0 0 ENSG00000231871.1 ENST00000421449.1 chr1:201785982-201798346 3 454 11906 exonic 3.64 0 0,1,0 0 0,0,0 215.198237885463 87.1599193683857 96.957 173.720264317181 47.2218209306232 127.213 274.488986784141 52.3524273475559 119.94 0 0 cat,chimp,cow,elephant,guinea_pig,human,macaque,marmoset,orangutan,panda,pig,rabbit, antisense antisense A549@0.046305,AG04450@0.039303,BJ@0.0649195,GM12878@0.049693,H1HESC@0.126573,HELAS3@0.130858,HEPG2@0.179237,HMEC@0.140875,HSMM@0.023192,HUVEC@0.325661,K562@0.060834,MCF7@0.0582235,NHEK@0.0105787,NHLF@0.0185275,SKNSHRA@0.113661, 0 0 0 0 ENSG00000231871.1 ENST00000421159.1 chr1:201789583-201798213 3 453 8173 exonic 3.64 0 0,1,1 0 0,0,0 251.269315673289 79.9818915942738 165.186 69.7682119205298 39.7559035849749 167.472 69.2582781456954 45.4938211183164 171.904 0 0 cat,chimp,cow,dog,elephant,guinea_pig,human,macaque,marmoset,orangutan,panda, antisense antisense A549@0.046305,AG04450@0.039303,BJ@0.0649195,GM12878@0.049693,H1HESC@0.126573,HELAS3@0.130858,HEPG2@0.179237,HMEC@0.140875,HSMM@0.023192,HUVEC@0.325661,K562@0.060834,MCF7@0.0582235,NHEK@0.0105787,NHLF@0.0185275,SKNSHRA@0.113661, 0 0 0 0 ENSG00000223774.1 ENST00000414927.1 chr1:201862970-201869106 3 491 5641 exonic 0.54 1 0,0,1 0 0,0,0 378.997963340122 58.1590143591562 13.144 390.869653767821 52.9186314483248 0 377.384928716904 58.03474561248 0 0 0 cat,chimp,cow,dog,elephant,guinea_pig,horse,human,macaque,marmoset,mouse,opossum,orangutan,panda,pig,platypus,rabbit,rat, antisense antisense A549@0.088418,AG04450@0.118993,BJ@0.0656215,GM12878@0.022396,H1HESC@0.0192875,HELAS3@0.067167,HEPG2@0.038652,HMEC@0,HSMM@0,HUVEC@0.004922,K562@0,MCF7@0,NHEK@0.018531,NHLF@0,SKNSHRA@0.20169, 0 0 0 0 ENSG00000223774.1 ENST00000458139.1 chr1:201867228-201869106 3 597 1277 exonic 0 1 0,0,1 0 0,0,0 343.520938023451 150.325763508222 116.768 362.683417085427 139.801096319499 90.298 351.619765494137 332.255285826155 96.164 0 0 cat,chimp,cow,elephant,guinea_pig,horse,human,macaque,marmoset,mouse,opossum,orangutan,panda,pig,platypus,rabbit,rat, antisense antisense A549@0.088418,AG04450@0.118993,BJ@0.0656215,GM12878@0.022396,H1HESC@0.0192875,HELAS3@0.067167,HEPG2@0.038652,HMEC@0,HSMM@0,HUVEC@0.004922,K562@0,MCF7@0,NHEK@0.018531,NHLF@0,SKNSHRA@0.20169, 0 0 0 0 ENSG00000234678.1 ENST00000419190.1 chr1:201969222-201979481 2 786 9471 exonic 0.74 0 1,1,1 1 0,0,0 1.14503816793893 21.8245169464682 100.408 19.1259541984733 29.9352761060078 185.405 4.78880407124682 35.3346003589906 163.603 0 0 chimp,horse,human,macaque,marmoset,orangutan,panda,rabbit,rat, antisense antisense A549@2.02228,AG04450@0.0028445,BJ@0,GM12878@0.731821,H1HESC@0.715618,HELAS3@1.7731,HEPG2@4.11191,HMEC@0.025981,HSMM@0.002893,HUVEC@0.005952,K562@0,MCF7@0.869394,NHEK@0.00167533,NHLF@0,SKNSHRA@0.002879, 0 0 0 0 ENSG00000234678.1 ENST00000415582.1 chr1:201969229-201970411 2 498 682 intronic 0.95 0 0,0,1 0 0,0,0 0 0 23.585 0 0 76.919 39.0903614457831 0 92.647 0 0 chimp,elephant,human,macaque,marmoset,orangutan,panda, antisense antisense A549@2.02228,AG04450@0.0028445,BJ@0,GM12878@0.731821,H1HESC@0.715618,HELAS3@1.7731,HEPG2@4.11191,HMEC@0.025981,HSMM@0.002893,HUVEC@0.005952,K562@0,MCF7@0.869394,NHEK@0.00167533,NHLF@0,SKNSHRA@0.002879, 0 0 0 0 ENSG00000226862.1 ENST00000428573.1 chr1:202573396-202574421 2 312 711 intronic 0 1 0,1,0 0 0,0,0 0 88.9451476793249 0 3.83012820512821 128.895921237693 0.992 4.0224358974359 146.088607594937 2.06 0 0 chimp,horse,human,macaque,marmoset,orangutan,panda, antisense antisense A549@0.128718,AG04450@0.057561,BJ@0.0917555,GM12878@0.0773305,H1HESC@0.0874205,HELAS3@0.22768,HEPG2@0.443809,HMEC@0.02608,HSMM@0.0138125,HUVEC@0.14407,K562@0.054176,MCF7@0.0843605,NHEK@0.0440263,NHLF@0.024856,SKNSHRA@0.162393, 0 0 0 0 ENSG00000225620.1 ENST00000411431.1 chr1:202601556-202602039 2 363 118 intronic 0 1 0,1,1 0 0,0,0 0 0 0 0 0 13.032 0 0 15.68 0 0 cat,chimp,elephant,horse,human,macaque,marmoset,orangutan, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0.0128065,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000228288.1 ENST00000417262.1 chr1:202780090-202781041 2 746 203 intergenic -2.14 1 1,1,1 1 0,0,0 44.6890080428954 0 53.895 31.0402144772118 284.847290640394 76.194 36.6514745308311 39.1970443349754 62.053 0 0 cat,chimp,guinea_pig,human,macaque,marmoset,mouse,orangutan,panda,rat, antisense antisense A549@0.664157,AG04450@0.926386,BJ@0.866275,GM12878@0.16385,H1HESC@3.79971,HELAS3@0.216164,HEPG2@1.25479,HMEC@0.598015,HSMM@0.990068,HUVEC@0.496641,K562@0.38675,MCF7@0.728651,NHEK@0.628766,NHLF@0.185767,SKNSHRA@1.82479, 0 0 0 0 ENSG00000228288.1 ENST00000425295.1 chr1:202780090-202781041 2 632 317 intergenic -1.77 1 1,1,1 1 0,0,0 52.75 0 53.895 36.6392405063291 271.596214511041 76.194 43.2626582278481 25.1009463722397 62.053 0 0 cat,chimp,guinea_pig,human,macaque,marmoset,mouse,orangutan,panda,rat, antisense antisense A549@0.664157,AG04450@0.926386,BJ@0.866275,GM12878@0.16385,H1HESC@3.79971,HELAS3@0.216164,HEPG2@1.25479,HMEC@0.598015,HSMM@0.990068,HUVEC@0.496641,K562@0.38675,MCF7@0.728651,NHEK@0.628766,NHLF@0.185767,SKNSHRA@1.82479, 0 0 0 0 ENSG00000184774.5 ENST00000330493.5 chr1:202789394-202796353 3 2807 4148 intergenic 13.84 0 0,0,0 0 0,0,0 12.8215176344852 0.554484088717454 0 21.9244745279658 0.976374156219865 9.223 58.4307089419309 1.30400192864031 9.085 0 0 cat,chimp,dog,elephant,horse,human,macaque,marmoset,orangutan,panda,pig, lincRNA lincRNA A549@0.0331465,AG04450@0.0055665,BJ@0.003445,GM12878@0.0137525,H1HESC@0.102348,HELAS3@0.002971,HEPG2@0.021232,HMEC@0.002914,HSMM@0.0162245,HUVEC@0,K562@0.005053,MCF7@0.336933,NHEK@0.025784,NHLF@0,SKNSHRA@0.047102, 0 0 0 0 ENSG00000214796.3 ENST00000443294.1 chr1:202820956-202830736 3 1832 7944 intergenic 12.23 0 0,1,0 1 0,0,0 0 0 0 34.563864628821 7.14665156092649 0 139.269104803493 47.4890483383686 0 0 0 cat,chimp,guinea_pig,horse,human,macaque,marmoset,orangutan, processed_transcript processed_transcript A549@0.161873,AG04450@0.0994995,BJ@0.066185,GM12878@0.015518,H1HESC@9.10842,HELAS3@0.958878,HEPG2@2.40943,HMEC@0.228962,HSMM@0.184548,HUVEC@0.477281,K562@0.466124,MCF7@8.3387,NHEK@0.0279083,NHLF@0.359672,SKNSHRA@0.89406, 0 0 0 0 ENSG00000214796.3 ENST00000449915.1 chr1:202822090-202828350 2 658 5600 intergenic 8.68 0 0,0,1 0 0,0,0 0 0 0 91.3085106382979 10.1380357142857 0 381.604863221884 63.9646428571429 13.496 0 0 cat,chimp,cow,dog,elephant,guinea_pig,horse,human,macaque,marmoset,mouse,opossum,orangutan,panda,pig,platypus,rabbit,rat, processed_transcript processed_transcript A549@0.161873,AG04450@0.0994995,BJ@0.066185,GM12878@0.015518,H1HESC@9.10842,HELAS3@0.958878,HEPG2@2.40943,HMEC@0.228962,HSMM@0.184548,HUVEC@0.477281,K562@0.466124,MCF7@8.3387,NHEK@0.0279083,NHLF@0.359672,SKNSHRA@0.89406, 0 0 0 0 ENSG00000214796.3 ENST00000430114.1 chr1:202827056-202830748 3 628 3060 intergenic 16.17 0 1,1,1 1 0,0,0 0 0 0 47.1050955414013 0 0 142.37101910828 6.43300653594771 0 0 0 chimp,cow,dog,elephant,guinea_pig,horse,human,macaque,marmoset,mouse,opossum,orangutan,panda,pig,rabbit,rat, processed_transcript processed_transcript A549@0.161873,AG04450@0.0994995,BJ@0.066185,GM12878@0.015518,H1HESC@9.10842,HELAS3@0.958878,HEPG2@2.40943,HMEC@0.228962,HSMM@0.184548,HUVEC@0.477281,K562@0.466124,MCF7@8.3387,NHEK@0.0279083,NHLF@0.359672,SKNSHRA@0.89406, 0 0 0 0 ENSG00000234996.2 ENST00000456105.1 chr1:202830882-202844369 3 2313 11170 intergenic 27.47 0 1,1,1 1 0,0,0 0 1.2408236347359 0 0 0.273948075201432 0 432.774751405102 0.683795881826321 4.545 0 0 chimp,human,macaque,marmoset,orangutan, processed_transcript processed_transcript A549@0.0116085,AG04450@0.0145165,BJ@0.047336,GM12878@0.011882,H1HESC@0.687588,HELAS3@0.160315,HEPG2@0.17489,HMEC@0.025799,HSMM@0.0332545,HUVEC@0.0395155,K562@0.113916,MCF7@0.26802,NHEK@0,NHLF@0.019558,SKNSHRA@0.215182, 0 0 0 0 ENSG00000234775.1 ENST00000421055.1 chr1:203096387-203097082 2 378 315 exonic -2.60 0 0,1,0 0 0,0,0 60.3597883597884 253.333333333333 159.047 30.3809523809524 176.628571428571 188.678 32.4523809523809 134.71746031746 174.991 0 0 chimp,cow,elephant,guinea_pig,horse,human,macaque,marmoset,orangutan,panda,pig, antisense antisense A549@0,AG04450@0.0058985,BJ@0.0128475,GM12878@0,H1HESC@0.044238,HELAS3@0,HEPG2@0.0143565,HMEC@0,HSMM@0.145824,HUVEC@0,K562@0,MCF7@0.013489,NHEK@0,NHLF@0.0050775,SKNSHRA@0.0250105, 0 0 0 0 ENSG00000224671.1 ENST00000434265.1 chr1:203113092-203122028 5 736 8192 intronic 4.38 0 0,0,1 0 0,0,0 0 4.0263671875 78.776 8.73913043478261 2.982421875 89.014 9.36277173913044 4.2054443359375 86.831 0 0 chimp,cow,horse,human,macaque,marmoset,orangutan,pig, antisense antisense A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0.0060985,HEPG2@0.0073625,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0.003067, 0 0 0 0 ENSG00000231507.1 ENST00000412772.1 chr1:203256280-203257929 3 772 873 intergenic 4.40 0 0,0,1 0 0,0,0 0 13.68843069874 0 0 0 0 0 0 0 0 0 cat,chimp,elephant,human,macaque,marmoset,orangutan,pig, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0.366566,H1HESC@0,HELAS3@0.0029155,HEPG2@0,HMEC@0,HSMM@0.0250405,HUVEC@0.0261775,K562@0.0476825,MCF7@0.005247,NHEK@0.0155713,NHLF@0.0049795,SKNSHRA@0.0087825, 0 0 0 0 ENSG00000231507.1 ENST00000433008.1 chr1:203256898-203257662 3 351 409 intergenic 2.39 0 0,1,0 0 0,0,0 0 0 11.95 0 0 0 0 0 0 0 0 cat,chimp,human,macaque,marmoset,orangutan, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0.366566,H1HESC@0,HELAS3@0.0029155,HEPG2@0,HMEC@0,HSMM@0.0250405,HUVEC@0.0261775,K562@0.0476825,MCF7@0.005247,NHEK@0.0155713,NHLF@0.0049795,SKNSHRA@0.0087825, 0 0 0 0 ENSG00000233791.1 ENST00000457348.1 chr1:203267886-203274437 3 2536 4011 intergenic -0.86 0 0,1,1 1 0,0,0 7.87657728706625 2.90600847668911 55.278 6.19952681388013 2.12789827973074 82.485 6.26419558359621 4.58788332086761 118.791 0 0 chimp,human,orangutan, lincRNA processed_transcript A549@0.0441605,AG04450@0,BJ@0.0051805,GM12878@0.417834,H1HESC@0.0031335,HELAS3@0.053614,HEPG2@0.026877,HMEC@0,HSMM@0.009028,HUVEC@0,K562@0.158403,MCF7@0.055115,NHEK@0.017261,NHLF@0,SKNSHRA@0.0369795, 0 0 0 0 ENSG00000233791.1 ENST00000425698.1 chr1:203269642-203273676 3 352 3678 intergenic 0 0 0,0,1 0 0,0,0 33.8778409090909 3.16911364872213 0 23.2897727272727 2.32055464926591 26.095 23.6988636363636 5.00326264274062 32.018 0 0 chimp,cow,dog,elephant,horse,human,macaque,marmoset,orangutan,pig,rabbit, lincRNA processed_transcript A549@0.0441605,AG04450@0,BJ@0.0051805,GM12878@0.417834,H1HESC@0.0031335,HELAS3@0.053614,HEPG2@0.026877,HMEC@0,HSMM@0.009028,HUVEC@0,K562@0.158403,MCF7@0.055115,NHEK@0.017261,NHLF@0,SKNSHRA@0.0369795, 0 0 0 0 ENSG00000233791.1 ENST00000432511.1 chr1:203270294-203274387 3 502 3587 intergenic 0 0 0,1,1 1 0,0,0 0 0 55.278 4.06374501992032 0.333147477000279 85.114 4.12749003984064 1.52829662670756 121.879 0 0 chimp,human,marmoset,orangutan,panda,pig, lincRNA processed_transcript A549@0.0441605,AG04450@0,BJ@0.0051805,GM12878@0.417834,H1HESC@0.0031335,HELAS3@0.053614,HEPG2@0.026877,HMEC@0,HSMM@0.009028,HUVEC@0,K562@0.158403,MCF7@0.055115,NHEK@0.017261,NHLF@0,SKNSHRA@0.0369795, 0 0 0 0 ENSG00000176754.8 ENST00000367207.3 chr1:204001575-204010393 5 1886 6924 intergenic 6.07 0 0,0,0 0 0,1,0 0 14.9757365684575 128.779 12.974019088017 19.8716060080878 45.14 30.5005302226935 20.4364529173888 48.056 0 0 cat,chimp,dog,human,macaque,marmoset,orangutan, lincRNA lincRNA A549@0,AG04450@0.0026525,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0.0010875,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000176754.8 ENST00000418245.1 chr1:204002062-204010392 5 1111 7211 intergenic 3.30 0 0,0,0 0 0,1,0 0 14.3796976840937 128.779 22.024302430243 19.0807100263486 45.14 51.7767776777678 19.6230758563306 48.056 0 0 cat,chimp,human,macaque,marmoset,orangutan,panda, lincRNA lincRNA A549@0,AG04450@0.0026525,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0.0010875,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000176754.8 ENST00000427799.1 chr1:204002062-204010393 6 1022 7299 intergenic 6.07 0 0,0,0 0 0,1,0 0 14.2063296341965 128.779 23.9422700587084 18.8506644745856 45.14 56.2857142857143 19.3864913001781 48.056 1 1 chimp,human,macaque,marmoset,orangutan, lincRNA lincRNA A549@0,AG04450@0.0026525,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0.0010875,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000234555.1 ENST00000421219.1 chr1:204100190-204101094 2 442 460 exonic -4.44 0 1,1,1 0 0,0,0 103.615384615385 0 19.09 106.02036199095 0 4.852 109.106334841629 0 7.02 0 0 cat,chimp,cow,dog,elephant,guinea_pig,horse,human,macaque,marmoset,mouse,orangutan,panda,pig,rabbit,rat, antisense ambiguous_orf A549@0.121543,AG04450@0.005048,BJ@0.0885935,GM12878@0,H1HESC@0.529393,HELAS3@0.287546,HEPG2@0.59634,HMEC@0.027666,HSMM@0.004634,HUVEC@0.0959045,K562@0,MCF7@0.130904,NHEK@0.241512,NHLF@0,SKNSHRA@0.042051, 0 0 0 0 ENSG00000230550.1 ENST00000433869.1 chr1:204110536-204112137 3 1123 474 exonic 1.86 0 0,1,0 0 0,0,0 19.3009795191451 0 40.8 14.0578806767587 20.4261603375527 54.72 20.9349955476402 30.3691983122363 52.008 0 0 cat,chimp,cow,human,macaque,marmoset,orangutan, antisense antisense A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0.0158355,HELAS3@0.0381785,HEPG2@0.026744,HMEC@0,HSMM@0,HUVEC@0.022597,K562@0,MCF7@0.007304,NHEK@0.012726,NHLF@0,SKNSHRA@0.004939, 0 0 0 0 ENSG00000231691.1 ENST00000437919.1 chr1:204246133-204247076 2 444 497 intronic 4.07 0 0,1,1 0 0,0,0 84.4594594594595 49.9798792756539 50.375 114.594594594595 83.169014084507 40.731 100.788288288288 82.0402414486921 38.054 0 0 chimp,cow,elephant,guinea_pig,human,macaque,marmoset,mouse,orangutan,panda,pig,rabbit, antisense antisense A549@0.009734,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0.005096, 0 0 0 0 ENSG00000223673.1 ENST00000441225.1 chr1:204336927-204346793 3 215 9647 intergenic 0 0 0,1,0 0 0,0,0 303.297674418605 13.4375453508863 7.077 350.204651162791 17.6651808852493 31.762 356.539534883721 16.9740852078366 482.002 0 0 chimp,cow,dog,elephant,guinea_pig,human,macaque,marmoset,mouse,opossum,panda,pig,platypus,rabbit,rat, lincRNA ambiguous_orf A549@0.157247,AG04450@0,BJ@0,GM12878@0.019999,H1HESC@0,HELAS3@0.211961,HEPG2@0.252221,HMEC@0,HSMM@0,HUVEC@0.043218,K562@0,MCF7@0.0349585,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000226330.1 ENST00000443515.1 chr1:204346978-204404974 3 483 57509 intronic -8.16 0 0,1,0 0 0,0,0 0 27.8904171520979 77.847 23.9565217391304 32.8799492253386 81.838 25.8136645962733 38.1343268010225 80.624 0 0 chimp,human,macaque,orangutan,pig, processed_transcript processed_transcript A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0.0122,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0.0042305,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000240710.1 ENST00000453895.1 chr1:204572163-204585693 3 680 12846 intergenic 1.46 0 0,0,0 0 0,1,0 0 3.55534796823914 9.275 8.97058823529412 5.38307644402927 7.378 8.94117647058824 6.62377393741242 12.72 0 0 chimp,guinea_pig,human,macaque,marmoset,orangutan,panda, antisense antisense A549@0.0871985,AG04450@0.003448,BJ@0,GM12878@0.158438,H1HESC@0.127817,HELAS3@0.010266,HEPG2@0,HMEC@0,HSMM@0.006675,HUVEC@0.082553,K562@0.010719,MCF7@0.050709,NHEK@0.0944467,NHLF@0.0057135,SKNSHRA@0.079192, 0 0 0 0 ENSG00000240219.1 ENST00000444037.1 chr1:204595903-204598840 2 2217 718 intronic 3.65 0 0,0,0 0 0,1,0 0 19.8607242339833 0 0 8.7158774373259 0 0 12.9540389972145 0 0 1 chimp,human,macaque, lincRNA lincRNA A549@0.164844,AG04450@0,BJ@0.004362,GM12878@0.0900975,H1HESC@0.0627575,HELAS3@0.0140665,HEPG2@0.018589,HMEC@0.003691,HSMM@0.0162365,HUVEC@0.016813,K562@0.008492,MCF7@0.0702815,NHEK@0.087338,NHLF@0,SKNSHRA@0.088852, 0 0 0 0 ENSG00000228153.1 ENST00000435021.1 chr1:204633000-204633741 2 443 296 intronic 2.46 0 0,1,0 0 0,0,0 0 0 0 16.8690744920993 0 35.69 17.2573363431151 0 35.974 0 0 cat,chimp,cow,guinea_pig,horse,human,macaque,marmoset,orangutan,panda,rabbit, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000225063.1 ENST00000452599.1 chr1:205202949-205205995 2 684 2360 intronic -2.50 0 0,0,0 0 0,0,0 0 26.6745762711864 78.064 4.7280701754386 14.4728813559322 103.537 10.0716374269006 20.4220338983051 103.658 0 0 cat,chimp,cow,guinea_pig,horse,human,macaque,marmoset,orangutan,panda,pig,rabbit, antisense antisense A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0.055668,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000226235.1 ENST00000447832.1 chr1:205342380-205356568 4 2777 11405 intronic 0.62 0 0,0,0 0 0,0,0 2.40979474252791 5.9776413853573 12.985 5.11811307166006 8.81446733888645 5.705 5.27511703276918 19.1706269180184 7.426 0 0 chimp,human,macaque,orangutan, antisense antisense A549@0.004683,AG04450@0.0473485,BJ@0.0017405,GM12878@0.0086815,H1HESC@0.0432965,HELAS3@0.001625,HEPG2@0,HMEC@0,HSMM@0.0077185,HUVEC@0.0019205,K562@0.0105015,MCF7@0.006894,NHEK@0.000918,NHLF@0.0020815,SKNSHRA@0, 0 0 0 0 ENSG00000224717.1 ENST00000442318.1 chr1:205425057-205438152 3 2882 10209 intergenic 8.99 0 0,0,0 0 0,0,0 120.488896599584 30.8422960133216 15.504 91.8716169326856 37.6545205211088 57.018 91.6457321304649 34.2504652757371 48.432 0 0 chimp,human,macaque,marmoset,orangutan, lincRNA processed_transcript A549@0.002338,AG04450@0,BJ@0.0022435,GM12878@0.044135,H1HESC@0.341553,HELAS3@0,HEPG2@0.001477,HMEC@0.005677,HSMM@0.002853,HUVEC@0,K562@0.0017025,MCF7@0,NHEK@0.004997,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000247614.1 ENST00000500756.1 chr1:205685228-205719310 2 975 33105 exonic -2.43 0 0,1,1 0 0,0,0 106.25641025641 32.210693248754 201.634 54.1569230769231 33.1572572119015 62.912 68.7148717948718 34.7903639933545 63.805 0 0 cat,chimp,cow,dog,guinea_pig,horse,human,macaque,marmoset,mouse,orangutan,panda,rabbit, lincRNA lincRNA A549@0.088536,AG04450@0.070664,BJ@0.0274185,GM12878@0.0481905,H1HESC@0.026169,HELAS3@0.0355655,HEPG2@0.004454,HMEC@0.012573,HSMM@0,HUVEC@0.0049775,K562@0.0966365,MCF7@0.020578,NHEK@0.0239477,NHLF@0.00395,SKNSHRA@0.017641, 0 0 0 0 ENSG00000227687.1 ENST00000421166.1 chr1:205904256-205904896 2 228 410 exonic -4.42 0 0,0,0 0 0,0,0 155.350877192982 0 44.01 217.40350877193 0 85.968 144.925438596491 0 86.844 0 0 cat,chimp,cow,dog,elephant,guinea_pig,horse,human,macaque,marmoset,orangutan,rabbit,rat, antisense antisense A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0.0362965,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000229874.1 ENST00000429210.1 chr1:206135293-206137828 2 756 1777 intronic 0 0 0,1,0 0 0,0,0 281.937830687831 90.3995498030388 92.426 546.992063492063 148.800225098481 627.025 491.096560846561 131.581316826111 470.022 0 0 cat,chimp,cow,dog,elephant,guinea_pig,horse,human,macaque,marmoset,mouse,opossum,orangutan,panda,pig,rat, antisense antisense A549@8.36653,AG04450@9.89488,BJ@15.7465,GM12878@3.02235,H1HESC@11.383,HELAS3@20.6613,HEPG2@16.6918,HMEC@8.06814,HSMM@6.80584,HUVEC@26.3879,K562@3.71136,MCF7@6.69307,NHEK@7.01616,NHLF@6.11358,SKNSHRA@17.9512, 0 0 0 0 ENSG00000236889.1 ENST00000428399.1 chr1:206164084-206166270 2 269 1915 intergenic -12.45 0 0,0,0 0 0,0,0 0 85.266318537859 0 35.5724907063197 40.1159268929504 0 60.1226765799256 52.8375979112272 0 0 0 cat,chimp,elephant,horse,human,macaque,marmoset,orangutan, lincRNA lincRNA A549@0.024029,AG04450@0,BJ@0.0178595,GM12878@0.066692,H1HESC@0,HELAS3@0.0250135,HEPG2@0.0080285,HMEC@0,HSMM@0.015185,HUVEC@0,K562@0.067845,MCF7@0.067778,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000226780.1 ENST00000425896.1 chr1:206214526-206223548 3 627 8391 intergenic -0.30 0 0,1,0 0 0,0,0 0 0 14.784 19.6283891547049 0.455726373495412 43.718 20.8118022328549 1.55547610535097 40.111 0 0 chimp,cow,dog,human,macaque,marmoset,orangutan, antisense antisense A549@0,AG04450@0,BJ@0,GM12878@0.0063995,H1HESC@0.0561175,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0.0144305, 0 0 0 0 ENSG00000240754.1 ENST00000455672.1 chr1:206296385-206306131 3 545 9197 intergenic 2.08 0 0,1,0 0 0,0,0 0 2.40317494835272 13.328 0 1.77275198434272 17.619 0.95045871559633 3.39349787974339 20.715 0 0 chimp,human,macaque,marmoset,orangutan, processed_transcript processed_transcript A549@0,AG04450@0,BJ@0,GM12878@0.583617,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0.00247867,NHLF@0,SKNSHRA@0.0044055, 0 0 0 0 ENSG00000233501.1 ENST00000450872.1 chr1:206552219-206554954 2 2176 557 intronic 0.04 0 0,0,0 0 0,0,0 110.759191176471 124.83842010772 0 109.411305147059 143.481149012567 0 117.078584558824 103.222621184919 0 0 0 cat,chimp,cow,dog,elephant,guinea_pig,horse,human,macaque,marmoset,orangutan,panda, antisense antisense A549@0.003097,AG04450@0.0264065,BJ@0.006571,GM12878@0.001851,H1HESC@0.020725,HELAS3@0.0086615,HEPG2@0.002505,HMEC@0,HSMM@0.0018895,HUVEC@0.021489,K562@0.0759225,MCF7@0.003776,NHEK@0,NHLF@0,SKNSHRA@0.012301, 33 3 38 2 ENSG00000224900.1 ENST00000448613.1 chr1:206576565-206577294 2 702 25 intronic -0.73 0 0,0,0 0 0,0,0 206.018518518519 0 48.204 229.132478632479 144 32.441 144.689458689459 0 26.95 0 0 cat,chimp,cow,dog,elephant,horse,human,macaque,marmoset,orangutan,panda,pig,rat, sense_intronic sense_intronic A549@1.19888,AG04450@0.526563,BJ@1.818,GM12878@0.21806,H1HESC@1.42342,HELAS3@2.36456,HEPG2@4.74247,HMEC@0,HSMM@0.304028,HUVEC@3.86642,K562@0.402668,MCF7@4.36119,NHEK@0.71999,NHLF@1.30946,SKNSHRA@1.71002, 0 0 0 0 ENSG00000237605.1 ENST00000425161.1 chr1:206807994-206808967 2 356 615 exonic -5.03 0 0,0,1 0 0,0,0 0 0 0 0 42.8081300813008 64.006 0 40.2455284552846 53.442 0 0 chimp,human,macaque,orangutan, antisense antisense A549@0.140607,AG04450@0.034266,BJ@0.0951045,GM12878@0.395087,H1HESC@0.439424,HELAS3@0.397336,HEPG2@0.454825,HMEC@0.183,HSMM@0.012115,HUVEC@0.028502,K562@0.402884,MCF7@0.319611,NHEK@0.0651717,NHLF@0.027251,SKNSHRA@0.103719, 0 0 0 0 ENSG00000243636.1 ENST00000442684.1 chr1:207352641-207357407 4 941 3819 intergenic -0.23 1 0,0,1 0 0,0,0 32.0818278427205 1.77114427860697 0 113.377258235919 0.757528148730034 0 17.4984059511158 0.818015187221786 2.12 0 0 cat,chimp,dog,elephant,guinea_pig,horse,human,macaque,marmoset,orangutan,panda,pig,rabbit, processed_transcript processed_transcript A549@0.002923,AG04450@0,BJ@0.002561,GM12878@0,H1HESC@0,HELAS3@0.122552,HEPG2@0.006108,HMEC@0.004333,HSMM@0,HUVEC@0,K562@0.002599,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000237074.1 ENST00000417084.1 chr1:207422412-207482466 4 913 59135 intergenic 0.28 0 0,0,1 0 0,0,0 0 0.65343705081593 0 0 3.51566754037372 0 0 4.68746089456329 0 0 0 chimp,cow,human,macaque,marmoset,orangutan, lincRNA lincRNA A549@0,AG04450@0.009777,BJ@0,GM12878@0.0051125,H1HESC@0,HELAS3@0.061705,HEPG2@0.0059495,HMEC@0,HSMM@0.0163205,HUVEC@0,K562@0,MCF7@0.0044845,NHEK@0.001392,NHLF@0,SKNSHRA@0.0074355, 0 0 0 0 ENSG00000236911.1 ENST00000439443.1 chr1:207725270-207726324 2 680 372 exonic -1.55 0 0,0,0 0 0,0,0 0 0 0 21.925 0 0 22.6426470588235 0 0 0 0 chimp,cow,dog,elephant,horse,human,macaque,marmoset,mouse,orangutan,panda,pig,rabbit,rat, antisense antisense A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0.153607,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000226202.1 ENST00000435542.1 chr1:208047140-208052418 3 562 4712 intergenic -14.53 1 0,0,0 0 0,0,0 155.798932384342 21.1969439728353 0 128.067615658363 8.46137521222411 0 130.606761565836 9.45161290322581 0 0 0 cat,chimp,dog,elephant,horse,human,macaque,mouse,orangutan, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0.0393535,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0.047343,HUVEC@0.0209785,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000232507.1 ENST00000438903.1 chr1:208780445-208785537 2 277 4813 intergenic -1.51 0 0,0,0 0 0,0,0 181.169675090253 15.8439642634531 32.966 132.176895306859 26.0608767920216 29.601 134.462093862816 28.402867234573 29.808 0 0 chimp,dog,elephant,horse,human,marmoset,opossum,orangutan,rat, lincRNA ambiguous_orf A549@0,AG04450@0,BJ@0,GM12878@0.016803,H1HESC@0.0074355,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000235585.1 ENST00000455137.1 chr1:208800086-208801430 2 283 1059 intergenic 0 1 0,0,0 0 0,0,0 46.9893992932862 2.76298394711992 133.668 35.8621908127208 0 119.731 68.8233215547703 0 137.31 0 0 chimp,dog,guinea_pig,horse,human,macaque,marmoset,opossum,orangutan,panda, lincRNA ambiguous_orf A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0.007961, 0 0 0 0 ENSG00000232812.1 ENST00000415754.1 chr1:208902033-208906529 4 523 3967 intergenic -4.55 0 0,0,1 0 0,0,0 0 122.742122510713 0 0 88.8578270733552 0 0 83.6964960927653 7.952 0 0 chimp,cow,dog,horse,human,macaque,orangutan, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000236950.1 ENST00000453569.1 chr1:209145799-209148652 2 593 2258 intergenic -7.17 0 0,0,0 0 0,0,0 0 0 0 50.6610455311973 12.4915854738707 1.984 127.320404721754 19.9530558015943 4.606 0 0 cat,chimp,dog,elephant,guinea_pig,horse,human,macaque,marmoset,mouse,opossum,orangutan,panda,pig,platypus,rabbit,rat, lincRNA lincRNA A549@0,AG04450@0,BJ@0.004067,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0.018694, 0 0 0 0 ENSG00000232537.1 ENST00000416349.1 chr1:209320612-209328446 3 470 7360 intergenic 3.92 0 0,1,0 0 0,0,0 33.9574468085106 57.8857336956522 349.18 27.7 239.333016304348 252.524 37.8936170212766 90.6735054347826 266.533 0 0 cat,chimp,cow,elephant,horse,human,macaque,marmoset,orangutan,rat, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0.0780105,HELAS3@0.917126,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000227940.1 ENST00000448988.1 chr1:209498801-209501877 3 489 2583 intergenic 5.70 0 0,0,0 0 0,0,0 37.8323108384458 80.0449090205188 454.739 56.0020449897751 103.915989159892 397.468 61.3169734151329 115.119628339141 385.93 0 0 cat,chimp,dog,guinea_pig,horse,human,macaque,marmoset,orangutan,panda, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0.0120805,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000231648.1 ENST00000443636.1 chr1:209541007-209553035 5 722 11298 intergenic -0.04 0 1,1,1 0 0,0,0 36.3240997229917 30.2488936094884 225.432 17.8379501385042 46.9377765976279 176.438 14.3116343490305 45.5309789343247 169.881 0 0 cat,chimp,horse,human,macaque,marmoset,orangutan,panda, lincRNA lincRNA A549@0,AG04450@0,BJ@0.02978,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0.016897,HSMM@0,HUVEC@0,K562@0,MCF7@0.0056565,NHEK@0.131357,NHLF@0,SKNSHRA@0.0062525, 0 0 0 0 ENSG00000231648.1 ENST00000447257.1 chr1:209545400-209546904 2 324 1178 intergenic -3.99 0 0,1,0 0 0,0,0 0 7.02886247877759 0 0 0 4.162 0 9.33616298811545 7.532 0 0 chimp,human,macaque,marmoset,orangutan,rabbit, lincRNA lincRNA A549@0,AG04450@0,BJ@0.02978,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0.016897,HSMM@0,HUVEC@0,K562@0,MCF7@0.0056565,NHEK@0.131357,NHLF@0,SKNSHRA@0.0062525, 0 0 0 0 ENSG00000230937.3 ENST00000429156.1 chr1:209602165-209605882 5 985 2724 intergenic 8.81 1 1,1,1 0 0,0,1 40.5959390862944 32.9052863436123 22.208 42.1868020304569 36.928046989721 28.02 41.8903553299492 39.8924375917768 27.957 0 0 chimp,dog,horse,human,macaque,marmoset,orangutan, lincRNA processed_transcript A549@0,AG04450@0.0024255,BJ@0,GM12878@2.61899,H1HESC@11.6969,HELAS3@0.010933,HEPG2@0.0081475,HMEC@119.289,HSMM@0.0055185,HUVEC@0.000726,K562@0,MCF7@6.3524,NHEK@210.988,NHLF@0.0207395,SKNSHRA@0, 0 0 0 0 ENSG00000230937.3 ENST00000433108.1 chr1:209602165-209605890 2 3346 377 intergenic 8.81 1 1,1,1 0 0,0,1 28.4121338912134 91.6551724137931 22.208 31.9384339509863 93.5809018567639 28.02 34.005977286312 95.8753315649867 27.957 0 0 chimp,human,macaque,marmoset,orangutan, lincRNA processed_transcript A549@0,AG04450@0.0024255,BJ@0,GM12878@2.61899,H1HESC@11.6969,HELAS3@0.010933,HEPG2@0.0081475,HMEC@119.289,HSMM@0.0055185,HUVEC@0.000726,K562@0,MCF7@6.3524,NHEK@210.988,NHLF@0.0207395,SKNSHRA@0, 0 0 0 0 ENSG00000230937.3 ENST00000366437.3 chr1:209602168-209605890 4 884 2832 intergenic 8.81 1 1,1,1 0 0,0,1 44.0565610859729 31.6504237288136 23.249 45.4966063348416 35.5197740112994 29.355 45.0746606334842 38.371115819209 29.373 1 1 chimp,human,macaque,marmoset,orangutan, lincRNA processed_transcript A549@0,AG04450@0.0024255,BJ@0,GM12878@2.61899,H1HESC@11.6969,HELAS3@0.010933,HEPG2@0.0081475,HMEC@119.289,HSMM@0.0055185,HUVEC@0.000726,K562@0,MCF7@6.3524,NHEK@210.988,NHLF@0.0207395,SKNSHRA@0, 0 0 0 0 ENSG00000230937.3 ENST00000431096.1 chr1:209602183-209605894 4 904 2801 intergenic 8.81 1 1,1,1 0 0,0,1 37.3241150442478 32.0007140307033 28.454 42.0287610619469 35.9128882541949 32.025 37.2898230088496 38.7957872188504 35.981 0 0 chimp,elephant,horse,human,macaque,marmoset,orangutan, lincRNA processed_transcript A549@0,AG04450@0.0024255,BJ@0,GM12878@2.61899,H1HESC@11.6969,HELAS3@0.010933,HEPG2@0.0081475,HMEC@119.289,HSMM@0.0055185,HUVEC@0.000726,K562@0,MCF7@6.3524,NHEK@210.988,NHLF@0.0207395,SKNSHRA@0, 0 0 0 0 ENSG00000230937.3 ENST00000451937.1 chr1:209602205-209605752 4 884 2657 intergenic 8.81 0 1,1,1 0 0,0,1 29.5328054298643 33.7350395182537 36.088 35.2579185520362 37.8592397440723 33.473 32.8619909502262 40.8983816334212 35.981 0 0 chimp,human,macaque,marmoset,orangutan, lincRNA processed_transcript A549@0,AG04450@0.0024255,BJ@0,GM12878@2.61899,H1HESC@11.6969,HELAS3@0.010933,HEPG2@0.0081475,HMEC@119.289,HSMM@0.0055185,HUVEC@0.000726,K562@0,MCF7@6.3524,NHEK@210.988,NHLF@0.0207395,SKNSHRA@0, 0 0 0 0 ENSG00000230937.3 ENST00000444286.1 chr1:209602428-209603966 2 521 1015 intergenic -18.81 0 0,1,1 0 0,0,1 0 0 46.151 0 12.7536945812808 43.247 0 12.2285714285714 41.647 0 0 chimp,human,macaque,marmoset,orangutan, lincRNA processed_transcript A549@0,AG04450@0.0024255,BJ@0,GM12878@2.61899,H1HESC@11.6969,HELAS3@0.010933,HEPG2@0.0081475,HMEC@119.289,HSMM@0.0055185,HUVEC@0.000726,K562@0,MCF7@6.3524,NHEK@210.988,NHLF@0.0207395,SKNSHRA@0, 0 0 0 0 ENSG00000230937.3 ENST00000458250.1 chr1:209602649-209606183 4 402 3126 intergenic -4.67 0 0,1,1 0 0,0,1 47.2164179104478 34.0588611644274 46.151 51.3432835820896 41.8570057581574 43.247 54.4452736318408 43.9357005758157 41.647 0 0 chimp,guinea_pig,horse,human,macaque,marmoset,orangutan,panda, lincRNA processed_transcript A549@0,AG04450@0.0024255,BJ@0,GM12878@2.61899,H1HESC@11.6969,HELAS3@0.010933,HEPG2@0.0081475,HMEC@119.289,HSMM@0.0055185,HUVEC@0.000726,K562@0,MCF7@6.3524,NHEK@210.988,NHLF@0.0207395,SKNSHRA@0, 0 0 0 0 ENSG00000230937.3 ENST00000419143.1 chr1:209602857-209604631 2 969 803 intergenic 2.97 0 0,1,1 0 0,0,1 56.8421052631579 0 46.151 59.8039215686274 8.6587795765878 43.247 67.4674922600619 8.40473225404732 41.647 0 0 cat,chimp,dog,elephant,guinea_pig,human,macaque,marmoset,orangutan,panda,rabbit, lincRNA processed_transcript A549@0,AG04450@0.0024255,BJ@0,GM12878@2.61899,H1HESC@11.6969,HELAS3@0.010933,HEPG2@0.0081475,HMEC@119.289,HSMM@0.0055185,HUVEC@0.000726,K562@0,MCF7@6.3524,NHEK@210.988,NHLF@0.0207395,SKNSHRA@0, 0 0 0 0 ENSG00000230937.3 ENST00000440276.1 chr1:209602908-209605894 4 535 2445 intergenic 8.81 1 1,1,1 0 0,0,1 30.6373831775701 36.6601226993865 46.151 58.6897196261682 38.6912065439673 43.964 60.5046728971963 42.1284253578732 42.352 0 0 cat,chimp,elephant,horse,human,macaque,marmoset,orangutan,panda, lincRNA processed_transcript A549@0,AG04450@0.0024255,BJ@0,GM12878@2.61899,H1HESC@11.6969,HELAS3@0.010933,HEPG2@0.0081475,HMEC@119.289,HSMM@0.0055185,HUVEC@0.000726,K562@0,MCF7@6.3524,NHEK@210.988,NHLF@0.0207395,SKNSHRA@0, 0 0 0 0 ENSG00000224260.1 ENST00000424696.1 chr1:209701800-209741018 7 858 38348 intergenic 1.97 0 0,1,0 0 0,0,0 55.3391608391608 18.2662459580682 0 73.9685314685315 21.3232502346928 0 68.0629370629371 22.54201001356 1.41 0 0 chimp,guinea_pig,horse,human,macaque,marmoset,orangutan, antisense antisense A549@0,AG04450@0,BJ@0.003841,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0.145619,HSMM@0.007906,HUVEC@0,K562@0,MCF7@0,NHEK@0.412479,NHLF@0,SKNSHRA@0.0650425, 0 0 0 0 ENSG00000224260.1 ENST00000453331.1 chr1:209701886-209720925 6 635 18394 intergenic 1.97 0 0,0,0 0 0,0,0 0 21.2400782863977 82.325 0 24.3699032293139 77.048 0 24.7922692182233 74.191 0 0 chimp,horse,human,macaque,marmoset,orangutan, antisense antisense A549@0,AG04450@0,BJ@0.003841,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0.145619,HSMM@0.007906,HUVEC@0,K562@0,MCF7@0,NHEK@0.412479,NHLF@0,SKNSHRA@0.0650425, 0 0 0 0 ENSG00000227591.1 ENST00000445272.1 chr1:209834709-209848592 3 378 13501 intergenic -0.31 0 1,1,1 0 0,0,0 15.8201058201058 5.29331160654766 80.478 7.93650793650794 6.26605436634323 62.196 12.026455026455 6.87712021331753 84.785 0 0 cat,chimp,horse,human,marmoset,orangutan,panda,rabbit, antisense antisense A549@0.0388405,AG04450@0.0361925,BJ@0.006462,GM12878@0.152635,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0.020701,HSMM@0,HUVEC@0,K562@0.104162,MCF7@0,NHEK@0.129538,NHLF@0.0317295,SKNSHRA@0.0894385, 0 0 0 0 ENSG00000227591.1 ENST00000441672.1 chr1:209834711-209897470 3 446 62309 intronic -0.31 0 0,0,1 0 0,0,0 13.4080717488789 18.3112230977868 0 6.72645739910314 19.1681779518208 3.585 6.81614349775785 20.7690381806801 5.773 0 0 cat,chimp,cow,dog,elephant,horse,human,macaque,marmoset,orangutan,panda,rabbit, antisense antisense A549@0.0388405,AG04450@0.0361925,BJ@0.006462,GM12878@0.152635,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0.020701,HSMM@0,HUVEC@0,K562@0.104162,MCF7@0,NHEK@0.129538,NHLF@0.0317295,SKNSHRA@0.0894385, 0 0 0 0 ENSG00000234233.1 ENST00000438597.1 chr1:211305930-211306716 2 624 160 intronic -0.81 0 0,0,1 0 0,0,0 0 0 0 8.88782051282051 0 98.974 10.400641025641 0 112.471 0 0 cat,chimp,cow,elephant,guinea_pig,horse,human,macaque,marmoset,orangutan, sense_intronic sense_intronic A549@0.216753,AG04450@0,BJ@0.113037,GM12878@0,H1HESC@0.0247795,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0.0860575,HUVEC@0,K562@0.0056,MCF7@0,NHEK@0,NHLF@0.015489,SKNSHRA@0, 0 0 0 0 ENSG00000223562.1 ENST00000450040.1 chr1:211355498-211356446 2 114 832 intergenic 0 0 0,0,0 0 0,0,0 0 0 34.44 0 0 17.533 0 0 33.686 0 0 chimp,human,orangutan, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000153363.8 ENST00000534914.1 chr1:211556145-211570206 5 424 13629 intergenic 2.21 0 1,1,1 1 0,1,0 8.67924528301887 0.388142930515812 0 10.188679245283 2.1963460268545 0 17.4150943396226 4.9126128109179 0 0 0 chimp,guinea_pig,horse,human,macaque,marmoset,orangutan, lincRNA processed_transcript A549@1.83877,AG04450@0.650629,BJ@0.69515,GM12878@2.36098,H1HESC@0.438608,HELAS3@1.07994,HEPG2@0.568832,HMEC@0.724136,HSMM@1.59381,HUVEC@0.211618,K562@2.689,MCF7@1.35232,NHEK@0.938971,NHLF@1.14609,SKNSHRA@1.69017, 0 0 0 0 ENSG00000153363.8 ENST00000423222.1 chr1:211556145-211605878 6 705 49018 intergenic 2.21 0 1,1,1 1 0,1,0 2.60992907801418 0.845179321881758 0 25.2170212765957 1.81506793422824 0 29.4170212765957 13.6562487249582 0 0 0 cow,horse,human,macaque,marmoset,orangutan, lincRNA processed_transcript A549@1.83877,AG04450@0.650629,BJ@0.69515,GM12878@2.36098,H1HESC@0.438608,HELAS3@1.07994,HEPG2@0.568832,HMEC@0.724136,HSMM@1.59381,HUVEC@0.211618,K562@2.689,MCF7@1.35232,NHEK@0.938971,NHLF@1.14609,SKNSHRA@1.69017, 0 0 0 0 ENSG00000153363.8 ENST00000448567.1 chr1:211556179-211565318 4 474 8659 intergenic 2.21 0 0,1,0 1 0,1,0 0 0 0 9.11392405063291 0.0623628594525927 0 11.3417721518987 3.10809562305116 0 0 1 chimp,human,macaque, lincRNA processed_transcript A549@1.83877,AG04450@0.650629,BJ@0.69515,GM12878@2.36098,H1HESC@0.438608,HELAS3@1.07994,HEPG2@0.568832,HMEC@0.724136,HSMM@1.59381,HUVEC@0.211618,K562@2.689,MCF7@1.35232,NHEK@0.938971,NHLF@1.14609,SKNSHRA@1.69017, 0 0 0 0 ENSG00000223649.1 ENST00000417794.1 chr1:211665597-211666259 2 489 171 exonic -5.41 0 0,0,0 0 0,0,0 0 0 0 0 0 15.49 0 0 21.614 0 0 cat,chimp,cow,dog,horse,human,macaque,marmoset,orangutan,panda,rabbit, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0.0339805, 0 0 0 0 ENSG00000228792.1 ENST00000452024.1 chr1:211809248-211816209 2 583 6376 intergenic 0.33 0 0,1,0 0 0,0,0 0 3.40746549560853 0 0 0 5.736 0 0 6.024 0 0 chimp,dog,human,macaque,marmoset,orangutan, antisense antisense A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0.00508,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0.0234655, 0 0 0 0 ENSG00000227764.1 ENST00000412871.1 chr1:211813037-211827923 2 1202 13682 intergenic 5.74 0 1,1,1 1 0,0,0 18.0748752079867 0.514544657213858 0 0 3.92691127028212 0 0 4.78738488525069 0 0 0 chimp,cow,horse,human,macaque,marmoset,orangutan,panda, lincRNA processed_transcript A549@0.017163,AG04450@0.03531,BJ@0.004055,GM12878@0,H1HESC@0,HELAS3@2.67402,HEPG2@0.505047,HMEC@0,HSMM@0,HUVEC@0.319039,K562@0,MCF7@0,NHEK@0,NHLF@0.0016205,SKNSHRA@0.175768, 0 0 0 0 ENSG00000227764.1 ENST00000430123.1 chr1:211813150-211827518 3 354 14010 intergenic -0.33 0 0,1,0 1 0,0,0 61.3728813559322 0.502498215560314 0 0 3.8349750178444 0 0 4.67530335474661 0 0 0 cat,chimp,cow,horse,human,macaque,marmoset,orangutan,panda, lincRNA processed_transcript A549@0.017163,AG04450@0.03531,BJ@0.004055,GM12878@0,H1HESC@0,HELAS3@2.67402,HEPG2@0.505047,HMEC@0,HSMM@0,HUVEC@0.319039,K562@0,MCF7@0,NHEK@0,NHLF@0.0016205,SKNSHRA@0.175768, 0 0 0 0 ENSG00000231057.2 ENST00000415202.1 chr1:211849104-211860132 4 751 10271 intergenic -1.81 0 0,1,0 1 0,0,0 0 0 48.617 7.91744340878828 3.70694187518255 94.522 8.06657789613848 4.56907798656411 92.033 0 0 cat,chimp,horse,human,macaque,orangutan,panda, antisense antisense A549@0.025178,AG04450@0.001214,BJ@0,GM12878@0.016626,H1HESC@0.026371,HELAS3@0.006003,HEPG2@0.0058375,HMEC@0.002218,HSMM@0.0068125,HUVEC@0.008328,K562@0.007547,MCF7@0.0033165,NHEK@0,NHLF@0.002102,SKNSHRA@0.018221, 0 0 0 0 ENSG00000231057.2 ENST00000421933.1 chr1:211855106-211860801 6 1840 3845 intergenic 4.43 1 0,0,0 0 0,0,0 0 0 0 1.84565217391304 1.15318595578674 4.746 1.88478260869565 2.08946684005202 4.76 0 0 chimp,human,macaque,orangutan, antisense antisense A549@0.025178,AG04450@0.001214,BJ@0,GM12878@0.016626,H1HESC@0.026371,HELAS3@0.006003,HEPG2@0.0058375,HMEC@0.002218,HSMM@0.0068125,HUVEC@0.008328,K562@0.007547,MCF7@0.0033165,NHEK@0,NHLF@0.002102,SKNSHRA@0.018221, 0 0 0 0 ENSG00000244344.1 ENST00000443174.1 chr1:211859864-211863445 3 458 3119 intergenic 5.53 0 0,0,0 0 0,0,0 0 0 0 0 0 8.113 0 0 8.389 0 0 chimp,human,orangutan, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0.006032, 0 0 0 0 ENSG00000226868.1 ENST00000458662.1 chr1:211889270-211898744 2 172 9300 intergenic -2.25 0 0,0,1 0 0,0,0 0 1.05365591397849 0 0 3.82161290322581 0 0 8.76612903225807 0 0 0 chimp,human,macaque,marmoset,orangutan, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000229258.1 ENST00000457272.1 chr1:212003188-212019783 4 702 15887 exonic -2.42 0 0,1,0 0 0,0,0 0 9.12677031535217 198.212 6.17521367521367 19.3717504878202 147.239 6.37464387464387 19.7121545918046 147.98 0 0 chimp,human,orangutan, antisense antisense A549@0.013106,AG04450@0,BJ@0,GM12878@0.0057105,H1HESC@0,HELAS3@0.0175315,HEPG2@0.0038635,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000229258.1 ENST00000430623.1 chr1:212004303-212026985 6 539 22133 intergenic -0.93 1 0,0,0 0 0,0,0 0 2.55076130664618 88.541 4.73098330241187 5.24592237834907 193.181 4.860853432282 6.26923598246962 181.554 0 0 chimp,cow,human,macaque,orangutan,pig, antisense antisense A549@0.013106,AG04450@0,BJ@0,GM12878@0.0057105,H1HESC@0,HELAS3@0.0175315,HEPG2@0.0038635,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000229258.1 ENST00000429499.1 chr1:212004689-212013275 3 408 8174 intergenic 7.23 1 0,1,1 0 0,0,0 0 6.90677758747247 63.148 0 13.1542696354294 178.214 0 15.1945192072425 158.793 0 0 NA antisense antisense A549@0.013106,AG04450@0,BJ@0,GM12878@0.0057105,H1HESC@0,HELAS3@0.0175315,HEPG2@0.0038635,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000229258.1 ENST00000446560.1 chr1:212004690-212027045 5 428 21919 intergenic -0.93 1 0,1,0 0 0,0,0 0 2.57566494821844 62.769 0 5.02992837264474 177.709 0 6.05269400976322 158.31 0 0 chimp,human,macaque,marmoset,orangutan, antisense antisense A549@0.013106,AG04450@0,BJ@0,GM12878@0.0057105,H1HESC@0,HELAS3@0.0175315,HEPG2@0.0038635,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000229983.1 ENST00000444750.1 chr1:212341549-212363601 4 506 21540 intergenic -9.19 0 0,0,0 0 0,0,0 0 6.99888579387187 0 4.90118577075099 7.22126276694522 1.736 109.513833992095 22.3306406685237 1.757 0 0 chimp,human, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0.0040675,HELAS3@0.013748,HEPG2@0.016442,HMEC@0,HSMM@0,HUVEC@0.005236,K562@0.0256465,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0.0044485, 0 0 0 0 ENSG00000226251.1 ENST00000443448.1 chr1:212398620-212407888 3 334 8930 intergenic -3.96 0 0,0,1 0 0,0,0 0 3.33012318029115 16.24 0 12.351287793953 26.609 0 12.1013437849944 26.255 0 0 cat,chimp,cow,dog,horse,human,macaque,marmoset,orangutan,panda,pig, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0.029554,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000226251.1 ENST00000412221.1 chr1:212398622-212399880 2 335 921 intergenic -3.96 1 0,0,1 0 0,0,0 0 10.8990228013029 0 0 38.7774158523344 0 0 40.0553745928339 0 0 0 cat,chimp,cow,dog,horse,human,macaque,marmoset,orangutan,panda,pig, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0.029554,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000226251.1 ENST00000431307.1 chr1:212398622-212412319 3 359 13334 intergenic -2.44 1 0,1,1 0 0,0,0 0 3.44817759112044 10.868 0 10.2674366281686 20.3 0 10.0734963251837 20.59 0 0 cat,chimp,dog,horse,human,macaque,marmoset,orangutan,pig, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0.029554,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000230063.1 ENST00000446847.1 chr1:212470790-212472921 2 648 1481 intronic -8.07 0 0,1,0 0 0,0,0 0 0 0 12.7700617283951 0 4.59 12.962962962963 63.5827143821742 4.828 0 0 chimp,cow,dog,elephant,horse,human,macaque,marmoset,orangutan,panda,pig,rabbit, sense_intronic sense_intronic A549@0.0480505,AG04450@0.0405715,BJ@0.063828,GM12878@0.084775,H1HESC@0.0263605,HELAS3@0.0329465,HEPG2@0.0413195,HMEC@0,HSMM@0,HUVEC@0.0097535,K562@0.275841,MCF7@0.043259,NHEK@0.00882533,NHLF@0,SKNSHRA@0.0079845, 0 0 0 0 ENSG00000234915.1 ENST00000442146.1 chr1:212472837-212505055 2 385 31831 intronic 0 0 0,0,0 0 0,0,0 0 21.0668844836794 0 3.72467532467532 20.9029248217147 0 3.91168831168831 31.2939901354026 0 0 0 chimp,dog,elephant,horse,human,macaque,marmoset,orangutan,panda,pig,rabbit, processed_transcript processed_transcript A549@0,AG04450@0,BJ@0,GM12878@0.0089985,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0.0083135,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000229832.1 ENST00000447949.1 chr1:212530760-212531695 2 494 439 intronic -8.05 0 0,1,0 0 0,0,0 0 0 168.801 0 0 204.047 0 0 226.521 0 0 chimp,human,macaque,marmoset,orangutan, antisense antisense A549@0.182952,AG04450@0.0536755,BJ@0.030624,GM12878@0.258866,H1HESC@0.207253,HELAS3@0.184037,HEPG2@0.216402,HMEC@0,HSMM@0,HUVEC@0.145479,K562@0.450817,MCF7@0,NHEK@0.0392197,NHLF@0.0112865,SKNSHRA@0.0773925, 0 0 0 0 ENSG00000224535.1 ENST00000439570.1 chr1:212640158-212641085 2 357 568 intergenic -3.45 1 0,1,0 0 0,0,0 0 0 0 0 0 0 0 5.56161971830986 0 0 0 chimp,guinea_pig,human,macaque,marmoset,orangutan, lincRNA lincRNA A549@0,AG04450@0.0164925,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0.011406,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0.00711167,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000228067.1 ENST00000423842.1 chr1:212719036-212729407 3 329 10038 intergenic 2.74 1 0,1,0 0 0,0,0 93.7872340425532 4.72843195855748 0 0 4.24227933851365 0 0 7.38384140266985 0 0 0 chimp,horse,human,macaque,marmoset,orangutan, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0.0121435,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000235862.2 ENST00000427949.1 chr1:212797626-212800113 2 2223 262 exonic 3.75 0 0,1,0 0 0,0,0 3.67296446243815 157.175572519084 0 36.2672064777328 108.259541984733 3.179 36.7539361223572 130.370229007634 3.245 0 0 cat,chimp,cow,dog,elephant,guinea_pig,horse,human,macaque,marmoset,orangutan,panda,pig, antisense antisense A549@0,AG04450@0.007983,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0.033605,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000237980.1 ENST00000446962.1 chr1:212827341-212838776 3 470 10961 intergenic 0 0 0,1,0 0 0,0,0 0 0 0 7.38085106382979 0.316759419760971 0 7.50851063829787 0.636073350971627 0 0 0 chimp,elephant,horse,human,macaque,marmoset,panda, lincRNA lincRNA A549@0.108556,AG04450@0.011238,BJ@0.0359905,GM12878@0.0437655,H1HESC@0.0844925,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0.041124,K562@0,MCF7@0,NHEK@0,NHLF@0.143143,SKNSHRA@0, 0 0 0 0 ENSG00000198468.2 ENST00000356684.2 chr1:213025450-213031430 2 2525 3453 intergenic 0.02 0 0,1,1 1 0,0,0 0 0 130.998 4.50772277227723 0 225.537 6.14851485148515 13.4115262090935 225.722 0 0 chimp,human,marmoset,orangutan, lincRNA processed_transcript A549@0.929867,AG04450@0.138624,BJ@0.668918,GM12878@0.817495,H1HESC@3.27369,HELAS3@2.25358,HEPG2@2.2416,HMEC@1.14133,HSMM@1.33718,HUVEC@0.588296,K562@2.35429,MCF7@0.227373,NHEK@0.0924617,NHLF@0.77402,SKNSHRA@1.80958, 0 0 0 0 ENSG00000198468.2 ENST00000424044.1 chr1:213029946-213031430 2 636 846 intergenic -3.78 0 1,1,1 1 0,0,0 0 0 130.998 0 0 225.537 0 0 225.722 0 0 chimp,human,macaque,marmoset,orangutan, lincRNA processed_transcript A549@0.929867,AG04450@0.138624,BJ@0.668918,GM12878@0.817495,H1HESC@3.27369,HELAS3@2.25358,HEPG2@2.2416,HMEC@1.14133,HSMM@1.33718,HUVEC@0.588296,K562@2.35429,MCF7@0.227373,NHEK@0.0924617,NHLF@0.77402,SKNSHRA@1.80958, 0 0 0 0 ENSG00000198468.2 ENST00000426161.1 chr1:213029946-213031430 2 890 592 intergenic -1.79 0 1,1,1 1 0,0,0 0 0 130.998 0 0 225.537 0 0 225.722 0 0 chimp,human,macaque,orangutan, lincRNA processed_transcript A549@0.929867,AG04450@0.138624,BJ@0.668918,GM12878@0.817495,H1HESC@3.27369,HELAS3@2.25358,HEPG2@2.2416,HMEC@1.14133,HSMM@1.33718,HUVEC@0.588296,K562@2.35429,MCF7@0.227373,NHEK@0.0924617,NHLF@0.77402,SKNSHRA@1.80958, 0 0 0 0 ENSG00000225233.1 ENST00000417161.1 chr1:213665644-213719790 2 438 53706 intergenic -1.44 0 0,0,0 0 0,0,0 359.077625570776 31.3417867649797 16.072 261.365296803653 25.2776784716791 5.563 273.075342465753 25.006516962723 2.406 0 0 chimp,cow,elephant,human,macaque,marmoset,opossum,orangutan,pig,platypus,rabbit, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0.094866,HEPG2@0.171486,HMEC@0,HSMM@0,HUVEC@0,K562@0.0061945,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0.0375055, 0 0 0 0 ENSG00000228255.1 ENST00000456240.1 chr1:213904759-213967930 2 345 62824 intergenic -8.99 0 0,0,0 0 0,0,0 0 59.2675729020756 0 0 57.7592639755507 0 0 60.6696007895072 0 0 0 cat,chimp,dog,elephant,horse,human,macaque,marmoset,orangutan,panda, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0.051386,HELAS3@0,HEPG2@0.068711,HMEC@0,HSMM@0.0065695,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0.0065385, 0 0 0 0 ENSG00000230461.1 ENST00000433082.1 chr1:213992978-214139608 5 3296 143326 intergenic 3.45 0 0,0,0 0 0,0,0 21.2845873786408 51.8701701017261 82.25 10.7157160194175 48.2461939913205 115.993 14.8109830097087 51.485641125825 129.31 0 0 chimp,horse,human,macaque,marmoset,orangutan, lincRNA lincRNA A549@0.0110015,AG04450@0,BJ@0,GM12878@0,H1HESC@0.003686,HELAS3@0.0783985,HEPG2@0.367383,HMEC@0,HSMM@0.003318,HUVEC@0.0092935,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0.613707, 0 0 0 0 ENSG00000230461.1 ENST00000413560.1 chr1:214014071-214139601 4 492 125032 intergenic 0.64 0 0,0,0 0 0,0,0 97.0426829268293 53.1134509565551 85.54 121.087398373984 49.3709290421652 120.2 146.154471544715 52.2635725254335 134 0 0 chimp,dog,horse,human,macaque,marmoset,opossum,orangutan,pig,rabbit, lincRNA lincRNA A549@0.0110015,AG04450@0,BJ@0,GM12878@0,H1HESC@0.003686,HELAS3@0.0783985,HEPG2@0.367383,HMEC@0,HSMM@0.003318,HUVEC@0.0092935,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0.613707, 0 0 0 0 ENSG00000236955.1 ENST00000451396.1 chr1:214139237-214159496 2 474 19783 intronic -1.58 0 0,0,0 0 0,0,0 56.3586497890295 106.403983217914 0 75.2658227848101 99.0138502754891 0 104.913502109705 97.5665975837841 3.159 0 0 cat,chimp,cow,dog,elephant,horse,human,macaque,marmoset,opossum,orangutan,panda,pig,rabbit, processed_transcript processed_transcript A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0.0038735,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000223365.1 ENST00000443830.1 chr1:214167446-214168426 2 227 751 intronic -2.51 0 0,0,0 0 0,0,0 343.493392070485 87.5446071904128 47.79 404.352422907489 37.3182423435419 27.574 433.850220264317 41.2316910785619 32.908 0 0 cat,chimp,cow,dog,elephant,guinea_pig,horse,human,macaque,marmoset,mouse,opossum,orangutan,panda,pig,rabbit,rat, sense_intronic sense_intronic A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000229242.1 ENST00000414995.1 chr1:216059924-216074806 2 798 14082 exonic 6.60 0 0,1,0 0 0,0,0 376.541353383459 158.76991904559 0 263.670426065163 116.806064479477 0 262.606516290727 138.804644226672 0 0 0 chimp,cow,dog,elephant,guinea_pig,horse,human,macaque,marmoset,mouse,opossum,orangutan,panda,pig,platypus,rabbit,rat, antisense antisense A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000233620.1 ENST00000446411.1 chr1:216245807-216260259 3 458 13990 exonic 1.38 0 0,1,0 0 0,0,0 23.056768558952 43.6335239456755 123.295 15.7685589519651 34.0728377412437 78.865 53.6506550218341 42.880843459614 88.206 0 0 cat,chimp,cow,dog,elephant,horse,human,macaque,marmoset,orangutan,panda,rabbit, antisense antisense A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000233620.1 ENST00000430890.1 chr1:216246071-216260247 3 388 13784 exonic 1.38 0 0,0,0 0 0,0,0 27.2164948453608 44.2856210098665 50.615 18.6134020618557 34.5820516540917 7.358 63.3298969072165 43.521691816599 8.242 0 0 cat,chimp,cow,dog,elephant,horse,human,macaque,marmoset,orangutan,panda,rabbit, antisense antisense A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000233620.1 ENST00000445619.1 chr1:216246148-216260247 2 341 13756 exonic -2.16 0 0,1,0 0 0,0,0 93.9149560117302 42.7960889793545 50.615 68.8826979472141 33.4427159057866 7.358 137.114369501466 41.9636522244839 8.242 0 0 cat,chimp,cow,dog,elephant,human,macaque,marmoset,mouse,opossum,orangutan,panda,rabbit,rat, antisense antisense A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000233620.1 ENST00000442606.1 chr1:216252415-216260247 3 387 7441 exonic 4.81 0 0,0,0 0 0,0,0 27.2868217054264 17.8934283026475 140.739 18.6614987080103 15.301841150383 110.189 63.4935400516796 19.0162612552076 163.733 0 0 chimp,human,macaque,marmoset,orangutan,rabbit, antisense antisense A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000236292.1 ENST00000420867.1 chr1:216367393-216377708 3 696 9615 intronic 1.23 0 0,0,0 0 0,1,0 0 67.3352054082163 0 0 39.8157046281851 0 0 52.341237649506 0 0 0 chimp,dog,horse,human,macaque,marmoset,panda, antisense antisense A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000229841.1 ENST00000458184.1 chr1:217665317-217667625 2 1961 345 intronic 0.49 0 0,0,0 0 0,0,0 104.978582355941 0 66.33 51.3901070882203 19.4492753623188 54.357 53.0550739418664 14.5507246376812 56.701 0 0 cat,chimp,cow,dog,elephant,guinea_pig,horse,human,macaque,marmoset,orangutan,panda,pig,rabbit, antisense antisense A549@0,AG04450@0.0032855,BJ@0,GM12878@0,H1HESC@0,HELAS3@0.004604,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0.002728,MCF7@0.0020485,NHEK@0.00595467,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000234070.1 ENST00000415765.1 chr1:217954540-217958462 3 417 3501 exonic -2.14 0 0,0,0 0 0,0,0 144.136690647482 4.32647814910026 0 172.748201438849 6.86603827477864 1.38 218.247002398082 10.6678091973722 1.458 0 0 chimp,cow,dog,horse,human,macaque,marmoset,mouse,orangutan,pig,rabbit,rat, antisense antisense A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000231814.1 ENST00000431637.1 chr1:218066243-218094146 4 1582 26315 intergenic 1.62 1 0,0,0 0 0,0,0 104.235145385588 55.5001710051302 0 27.7692793931732 37.7784153524606 0 30.9759797724399 43.4613338400152 0 0 0 chimp,human,macaque,marmoset,orangutan, lincRNA non_coding A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000230714.1 ENST00000420347.1 chr1:218205177-218207002 2 213 1610 intergenic 0 0 0,1,0 0 0,0,0 405.333333333333 99.8260869565217 142.325 197.159624413146 88.1006211180124 43.192 287.741784037559 98.1857142857143 55.324 0 0 cat,chimp,cow,dog,elephant,horse,human,macaque,marmoset,opossum,orangutan,panda,pig,platypus,rabbit, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000232100.1 ENST00000456026.1 chr1:218216847-218232482 4 1724 13905 intergenic -0.96 1 0,0,0 0 0,0,0 0 41.2089895720964 55.786 0 48.2318590435095 42.137 0 50.0607695073714 47.289 0 0 chimp,human,macaque,marmoset,orangutan, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0.003157,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000232480.1 ENST00000414452.1 chr1:218517538-218519020 3 554 924 intergenic -0.50 0 0,1,1 0 0,0,0 216.458483754513 64.5292207792208 222.842 192.972924187726 297.548701298701 102.625 199.193140794224 288.042207792208 103.393 0 0 chimp,cow,dog,elephant,guinea_pig,horse,human,macaque,marmoset,mouse,orangutan,panda,rabbit,rat, antisense antisense A549@1.46555,AG04450@0.0921445,BJ@0.0657725,GM12878@0,H1HESC@0.166846,HELAS3@0.0674375,HEPG2@0.004897,HMEC@0.080863,HSMM@0.335439,HUVEC@0.144802,K562@0.0603635,MCF7@1.9344,NHEK@0.116605,NHLF@0.062666,SKNSHRA@0.072311, 0 0 0 0 ENSG00000225561.1 ENST00000446002.1 chr1:219086099-219089526 3 387 3036 intergenic -10.22 0 0,0,0 0 0,0,0 0 0 0 0 6.39756258234519 0 0 9.60474308300395 0 0 0 chimp,horse,human,macaque,marmoset,orangutan,panda,pig,rabbit, lincRNA lincRNA A549@0.0339925,AG04450@0,BJ@0,GM12878@0.0103375,H1HESC@0,HELAS3@0.0405555,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000228063.1 ENST00000441331.1 chr1:219259944-219347303 4 720 86633 exonic 5.69 0 0,0,0 0 0,0,0 62.7236111111111 19.1974074544342 70.448 32.8013888888889 19.6028072443526 42.739 40.3208333333333 21.9675412371729 43.062 0 0 chimp,cow,elephant,guinea_pig,horse,human,macaque,marmoset,orangutan,panda,pig,rabbit, lincRNA processed_transcript A549@0.0878075,AG04450@0.09034,BJ@0.0272045,GM12878@0.353258,H1HESC@0.030954,HELAS3@0.02841,HEPG2@0.0236675,HMEC@0.016967,HSMM@0.005684,HUVEC@0.035088,K562@0.201064,MCF7@0,NHEK@0.026737,NHLF@0.0657405,SKNSHRA@0.086348, 0 0 0 0 ENSG00000223842.1 ENST00000420237.1 chr1:219395590-219398839 2 1124 2123 intergenic -5.32 0 0,0,1 0 0,0,0 0 0 0 0 28.7527084314649 0 0 32.7070183702308 0 0 0 chimp,human,macaque,marmoset,orangutan, lincRNA lincRNA A549@0.0038555,AG04450@0,BJ@0,GM12878@0.0094335,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000228536.1 ENST00000441790.1 chr1:219583023-219585283 2 809 1449 intergenic 3.96 0 0,0,1 0 0,0,0 0 0 47.012 0 0 26.962 0 0 27.915 0 0 cat,chimp,horse,human,macaque,orangutan, lincRNA lincRNA A549@0,AG04450@0.016582,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0.0144355,SKNSHRA@0, 0 0 0 0 ENSG00000230024.1 ENST00000420762.1 chr1:219608494-219615984 3 448 7038 intergenic -3.80 0 0,0,0 0 0,0,0 0 0 20.9 0 0 38.168 0 0.276214833759591 48.935 0 0 chimp,human,macaque,marmoset,orangutan, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0.0151095, 0 0 0 0 ENSG00000238232.1 ENST00000458443.1 chr1:219730534-219731043 2 180 327 intergenic 0 0 0,0,0 0 0,0,0 0 0 44.4 0 0 0 0 0 3.9 0 0 NA lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000226927.1 ENST00000413159.1 chr1:220533073-220533525 2 243 207 intergenic 0 0 0,1,0 0 0,0,0 0 0 0 0 0 0 0 0 5.832 0 0 chimp,horse,human,macaque,marmoset,orangutan,pig, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000231529.1 ENST00000446169.1 chr1:220658446-220660385 2 388 1549 intergenic -0.21 0 0,0,0 0 0,0,0 0 0 77.835 0 2.03744351194319 20.269 0 2.10716591349258 20.416 0 0 chimp,cow,dog,elephant,horse,human,macaque,marmoset,orangutan,rabbit, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000225782.1 ENST00000446040.1 chr1:220835813-220836458 2 588 55 exonic -6.33 0 0,0,0 0 0,0,0 357.464285714286 0 503.465 251.386054421769 51.3818181818182 237.99 346.034013605442 158.072727272727 316.23 0 0 cat,chimp,cow,dog,elephant,guinea_pig,horse,human,macaque,marmoset,mouse,opossum,orangutan,panda,pig,platypus,rabbit,rat, antisense antisense A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0.01155, 0 0 0 0 ENSG00000238078.1 ENST00000431347.1 chr1:221002597-221005771 4 958 2210 intergenic 2.78 0 0,0,1 0 0,0,0 0 0 0 0 0.807692307692308 0 0 7.81085972850679 3.159 0 0 chimp,human,macaque,marmoset,orangutan, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0.0622405,HELAS3@0.0516615,HEPG2@0.0849105,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0.0167755, 0 0 0 0 ENSG00000230145.1 ENST00000439095.1 chr1:221064509-221068345 4 2432 1398 intergenic 10.03 0 0,0,0 0 0,0,0 6.71463815789474 0 0 7.81208881578947 0 1.673 8.20394736842105 0 1.701 0 0 chimp,horse,human,macaque,marmoset,orangutan, lincRNA ambiguous_orf A549@0,AG04450@0.003867,BJ@0.005314,GM12878@0,H1HESC@0,HELAS3@0.002179,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000234754.1 ENST00000439004.1 chr1:221503422-221509638 2 4338 1876 intergenic 4.57 0 0,0,0 0 0,0,0 0 42.7505330490405 69.72 0 54.5996801705757 60.115 14.9672660212079 55.9189765458422 61.504 0 0 chimp,human,macaque,marmoset,orangutan, lincRNA lincRNA A549@0.0083585,AG04450@0.030778,BJ@0.0142395,GM12878@0,H1HESC@0,HELAS3@1.53836,HEPG2@0.060758,HMEC@0,HSMM@0.0053115,HUVEC@0,K562@0,MCF7@0.0094865,NHEK@0,NHLF@0.050057,SKNSHRA@0.0998015, 0 0 0 0 ENSG00000234754.1 ENST00000434398.1 chr1:221505981-221509262 3 642 2635 intergenic 3.79 0 0,0,0 0 0,0,0 0 30.4364326375712 0 0 38.872485768501 0 0 39.8117647058824 0 0 0 chimp,human,macaque,orangutan, lincRNA lincRNA A549@0.0083585,AG04450@0.030778,BJ@0.0142395,GM12878@0,H1HESC@0,HELAS3@1.53836,HEPG2@0.060758,HMEC@0,HSMM@0.0053115,HUVEC@0,K562@0,MCF7@0.0094865,NHEK@0,NHLF@0.050057,SKNSHRA@0.0998015, 0 0 0 0 ENSG00000232436.1 ENST00000440104.1 chr1:221681901-221684321 2 805 1613 intergenic -2.93 0 0,0,0 0 0,0,0 0 0 0 0 0 0 0 0 0 0 0 chimp,human,macaque,marmoset,orangutan, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0.003333, 0 0 0 0 ENSG00000227925.1 ENST00000431729.1 chr1:222001008-222014008 4 419 12575 intergenic -0.35 0 0,0,0 0 0,0,0 0 0 0 0 3.7086282306163 0 0 6.50489065606362 0 0 0 chimp,dog,human,macaque,marmoset,orangutan, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0.0131475, 0 0 0 0 ENSG00000238042.1 ENST00000433576.1 chr1:222054323-222092054 5 715 37008 intergenic -4.94 0 0,0,0 0 0,0,0 0 8.38670017293558 0 0 7.70776588845655 0 0 8.85332900994379 0 0 0 chimp,human,macaque,marmoset,mouse,orangutan, lincRNA lincRNA A549@0,AG04450@0.00533,BJ@0.0112345,GM12878@0,H1HESC@0.003437,HELAS3@0.0074695,HEPG2@0,HMEC@0,HSMM@0.0222405,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0.009568,SKNSHRA@0.034217, 0 0 0 0 ENSG00000238042.1 ENST00000412445.1 chr1:222086990-222151865 4 601 64268 intergenic 3.38 0 0,0,1 0 0,0,0 0 0 13.621 0 0.62664156345304 25.357 0 6.23923258853551 19.272 0 0 chimp,horse,human,macaque,marmoset,orangutan, lincRNA lincRNA A549@0,AG04450@0.00533,BJ@0.0112345,GM12878@0,H1HESC@0.003437,HELAS3@0.0074695,HEPG2@0,HMEC@0,HSMM@0.0222405,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0.009568,SKNSHRA@0.034217, 0 0 0 0 ENSG00000228437.1 ENST00000421147.1 chr1:222139683-222156485 3 452 16346 intergenic 3.03 0 0,0,0 0 0,0,0 0 0.833292548635752 0 0 1.5512663648599 0 0 1.8809494677597 0 0 0 human, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0.007148,HELAS3@0.0180525,HEPG2@0.0211735,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000228437.1 ENST00000441160.1 chr1:222139752-222158306 3 1145 17405 intergenic 4.41 0 0,0,0 0 0,0,0 0 0.78259120942258 0 0 1.45688020683712 0 0 1.76650387819592 0 0 0 cat,chimp,elephant,horse,human,macaque,marmoset,orangutan,panda,pig,rabbit, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0.007148,HELAS3@0.0180525,HEPG2@0.0211735,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000232679.1 ENST00000438158.1 chr1:222215047-222238105 3 559 22495 intergenic 5.62 0 0,1,0 0 0,0,0 0 6.98430762391643 0 0 8.534385418982 2.868 0 9.52211602578351 28.039 0 0 cat,chimp,dog,horse,human,macaque,marmoset,orangutan,panda,rabbit, lincRNA lincRNA A549@0.0576165,AG04450@0.328045,BJ@0.145701,GM12878@0,H1HESC@0.0155355,HELAS3@0,HEPG2@0.0104265,HMEC@0.284147,HSMM@2.46691,HUVEC@0,K562@0.0096995,MCF7@0,NHEK@0.0470823,NHLF@0.15878,SKNSHRA@0.328885, 0 0 0 0 ENSG00000236230.1 ENST00000416510.1 chr1:222262511-222560776 4 671 297588 intergenic 3.95 0 0,0,1 0 0,0,0 0 3.08050391816874 0 0 4.22474696560345 0 0 8.02548825893517 0 0 0 chimp,cow,human,macaque,marmoset,orangutan, processed_transcript processed_transcript A549@0.004092,AG04450@0.0387645,BJ@0.012745,GM12878@0.0034725,H1HESC@0,HELAS3@0,HEPG2@0.0094695,HMEC@0,HSMM@0.01318,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0.014293,SKNSHRA@0.19854, 0 0 0 0 ENSG00000226643.1 ENST00000455363.1 chr1:222626082-222628047 3 313 1648 intergenic 0 0 0,0,0 0 0,0,0 0 0 76.184 0 0 76.423 0 0 61.538 0 0 chimp,human,macaque,marmoset,orangutan, lincRNA lincRNA A549@0.0106725,AG04450@0,BJ@0.007658,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0.016945,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0.0175995, 0 0 0 0 ENSG00000225265.1 ENST00000441835.1 chr1:222763167-222765828 2 457 2202 exonic -1.89 1 1,1,1 1 0,0,0 0 0 0 0 3.5558583106267 5.733 0 3.80608537693006 5.889 0 0 chimp,human,macaque,orangutan, antisense antisense A549@0.730286,AG04450@0.15566,BJ@0.145985,GM12878@0.697159,H1HESC@0.149977,HELAS3@0.823852,HEPG2@0.230401,HMEC@0.142489,HSMM@0.214148,HUVEC@0.0086795,K562@1.22792,MCF7@0.42083,NHEK@0.316168,NHLF@0.194082,SKNSHRA@1.01203, 0 0 0 0 ENSG00000225265.1 ENST00000427540.1 chr1:222763273-222766075 3 747 2051 exonic 3.63 0 0,1,0 1 0,0,0 0 0 0 0 3.81764992686494 5.733 0 4.08629936616285 5.889 0 0 chimp,human,macaque,orangutan,panda, antisense antisense A549@0.730286,AG04450@0.15566,BJ@0.145985,GM12878@0.697159,H1HESC@0.149977,HELAS3@0.823852,HEPG2@0.230401,HMEC@0.142489,HSMM@0.214148,HUVEC@0.0086795,K562@1.22792,MCF7@0.42083,NHEK@0.316168,NHLF@0.194082,SKNSHRA@1.01203, 0 0 0 0 ENSG00000225265.1 ENST00000413074.1 chr1:222763304-222766374 2 1311 1757 intergenic 3.63 0 0,1,0 1 0,0,0 0 0 0 0 4.45645987478657 5.733 0 4.77006260671599 5.889 0 0 chimp,human,macaque,orangutan, antisense antisense A549@0.730286,AG04450@0.15566,BJ@0.145985,GM12878@0.697159,H1HESC@0.149977,HELAS3@0.823852,HEPG2@0.230401,HMEC@0.142489,HSMM@0.214148,HUVEC@0.0086795,K562@1.22792,MCF7@0.42083,NHEK@0.316168,NHLF@0.194082,SKNSHRA@1.01203, 0 0 0 0 ENSG00000228106.1 ENST00000450784.1 chr1:222988364-223010726 3 540 21818 intergenic -0.58 1 1,1,1 1 0,0,0 67.2907407407407 13.7140892840774 6.682 40.7333333333333 3.3962324686039 8.386 72.5981481481482 14.5944174534788 8.728 0 0 chimp,dog,elephant,horse,human,macaque,marmoset,orangutan,rabbit, processed_transcript processed_transcript A549@7.77154,AG04450@5.60477,BJ@1.01057,GM12878@2.73307,H1HESC@4.9512,HELAS3@12.7842,HEPG2@5.22921,HMEC@1.56795,HSMM@1.53685,HUVEC@3.10022,K562@0.140597,MCF7@2.78486,NHEK@2.15968,NHLF@7.20459,SKNSHRA@9.26342, 0 0 0 0 ENSG00000228106.1 ENST00000426045.1 chr1:222988379-223010681 3 553 21745 intergenic -0.58 1 1,1,1 1 0,0,0 58.7377938517179 13.7601287652334 10.537 29.2784810126582 3.40763393883651 14.191 60.4484629294756 14.6434122786848 14.503 0 0 chimp,dog,elephant,horse,human,macaque,marmoset,orangutan,panda,rabbit, processed_transcript processed_transcript A549@7.77154,AG04450@5.60477,BJ@1.01057,GM12878@2.73307,H1HESC@4.9512,HELAS3@12.7842,HEPG2@5.22921,HMEC@1.56795,HSMM@1.53685,HUVEC@3.10022,K562@0.140597,MCF7@2.78486,NHEK@2.15968,NHLF@7.20459,SKNSHRA@9.26342, 0 0 0 0 ENSG00000228106.1 ENST00000457955.1 chr1:222988389-223010571 5 380 21794 intergenic -7.03 0 0,1,0 1 0,0,0 84.1263157894737 13.729191520602 11.308 32.4236842105263 3.39997246948701 18.061 71.4421052631579 14.7108378452785 18.353 0 0 chimp,cow,dog,elephant,horse,human,macaque,marmoset,orangutan,pig,rabbit, processed_transcript processed_transcript A549@7.77154,AG04450@5.60477,BJ@1.01057,GM12878@2.73307,H1HESC@4.9512,HELAS3@12.7842,HEPG2@5.22921,HMEC@1.56795,HSMM@1.53685,HUVEC@3.10022,K562@0.140597,MCF7@2.78486,NHEK@2.15968,NHLF@7.20459,SKNSHRA@9.26342, 0 0 0 0 ENSG00000228106.1 ENST00000444858.1 chr1:222988393-223010726 4 358 21969 intergenic -2.10 1 1,1,1 1 0,0,0 89.2960893854749 13.6198279393691 11.308 30.0921787709497 3.37288907096363 19.609 71.5307262569832 14.5936546952524 19.893 0 0 chimp,elephant,human,macaque,marmoset,orangutan,panda,rabbit, processed_transcript processed_transcript A549@7.77154,AG04450@5.60477,BJ@1.01057,GM12878@2.73307,H1HESC@4.9512,HELAS3@12.7842,HEPG2@5.22921,HMEC@1.56795,HSMM@1.53685,HUVEC@3.10022,K562@0.140597,MCF7@2.78486,NHEK@2.15968,NHLF@7.20459,SKNSHRA@9.26342, 0 0 0 0 ENSG00000228106.1 ENST00000435378.1 chr1:222988402-223010724 5 762 21552 intergenic -0.58 1 1,1,1 1 0,0,0 41.9527559055118 13.8833518930958 11.308 18.7086614173228 3.43814959168523 23.092 48.9186351706037 14.5066815144766 23.358 0 0 chimp,cow,dog,elephant,horse,human,macaque,marmoset,orangutan,pig,rabbit, processed_transcript processed_transcript A549@7.77154,AG04450@5.60477,BJ@1.01057,GM12878@2.73307,H1HESC@4.9512,HELAS3@12.7842,HEPG2@5.22921,HMEC@1.56795,HSMM@1.53685,HUVEC@3.10022,K562@0.140597,MCF7@2.78486,NHEK@2.15968,NHLF@7.20459,SKNSHRA@9.26342, 0 0 0 0 ENSG00000228106.1 ENST00000441676.1 chr1:222988403-223010726 3 574 21745 intergenic -0.58 1 1,1,1 1 0,0,0 55.6933797909408 13.7601287652334 11.308 12.7003484320557 3.40763393883651 23.479 42.8101045296167 14.6434122786848 23.743 0 0 chimp,dog,elephant,horse,human,macaque,marmoset,orangutan,panda,rabbit, processed_transcript processed_transcript A549@7.77154,AG04450@5.60477,BJ@1.01057,GM12878@2.73307,H1HESC@4.9512,HELAS3@12.7842,HEPG2@5.22921,HMEC@1.56795,HSMM@1.53685,HUVEC@3.10022,K562@0.140597,MCF7@2.78486,NHEK@2.15968,NHLF@7.20459,SKNSHRA@9.26342, 0 0 0 0 ENSG00000228106.1 ENST00000448808.1 chr1:222988417-223000653 2 128 12106 intergenic 0 0 0,1,0 1 0,0,1 75 9.6132496282835 11.308 21.7265625 3.90632744093838 23.479 35.296875 19.0564183049727 23.743 0 0 chimp,horse,human,macaque,marmoset,orangutan, processed_transcript processed_transcript A549@7.77154,AG04450@5.60477,BJ@1.01057,GM12878@2.73307,H1HESC@4.9512,HELAS3@12.7842,HEPG2@5.22921,HMEC@1.56795,HSMM@1.53685,HUVEC@3.10022,K562@0.140597,MCF7@2.78486,NHEK@2.15968,NHLF@7.20459,SKNSHRA@9.26342, 0 0 0 0 ENSG00000228106.1 ENST00000457636.1 chr1:222988420-223010725 5 512 21785 intergenic -0.96 1 1,1,1 1 0,0,1 62.4375 13.7348634381455 11.308 19.669921875 3.25953637824191 23.479 60.025390625 14.3082396144136 23.743 0 0 chimp,elephant,human,macaque,marmoset,orangutan,rabbit, processed_transcript processed_transcript A549@7.77154,AG04450@5.60477,BJ@1.01057,GM12878@2.73307,H1HESC@4.9512,HELAS3@12.7842,HEPG2@5.22921,HMEC@1.56795,HSMM@1.53685,HUVEC@3.10022,K562@0.140597,MCF7@2.78486,NHEK@2.15968,NHLF@7.20459,SKNSHRA@9.26342, 0 0 0 0 ENSG00000228106.1 ENST00000439440.1 chr1:222988453-223000924 2 214 12255 intergenic 3.30 0 0,1,0 1 0,0,1 0 12.6053039575683 11.308 12.9953271028037 3.85883312933497 23.479 13.1635514018692 18.9635250917993 23.743 0 0 chimp,dog,horse,human,macaque,marmoset,orangutan,pig,rabbit, processed_transcript processed_transcript A549@7.77154,AG04450@5.60477,BJ@1.01057,GM12878@2.73307,H1HESC@4.9512,HELAS3@12.7842,HEPG2@5.22921,HMEC@1.56795,HSMM@1.53685,HUVEC@3.10022,K562@0.140597,MCF7@2.78486,NHEK@2.15968,NHLF@7.20459,SKNSHRA@9.26342, 0 0 0 0 ENSG00000228106.1 ENST00000420335.1 chr1:222988471-223010642 3 442 21725 intergenic -0.58 1 1,1,1 1 0,0,1 72.3257918552036 13.7727963176064 11.308 22.7850678733032 3.26853855005754 23.479 61.9683257918552 14.5128193325662 23.743 0 0 chimp,dog,elephant,human,macaque,marmoset,orangutan,rabbit, processed_transcript processed_transcript A549@7.77154,AG04450@5.60477,BJ@1.01057,GM12878@2.73307,H1HESC@4.9512,HELAS3@12.7842,HEPG2@5.22921,HMEC@1.56795,HSMM@1.53685,HUVEC@3.10022,K562@0.140597,MCF7@2.78486,NHEK@2.15968,NHLF@7.20459,SKNSHRA@9.26342, 0 0 0 0 ENSG00000228106.1 ENST00000442171.1 chr1:222997226-223010726 3 545 12951 intergenic -0.58 1 0,1,1 0 0,0,0 58.656880733945 22.0333564975678 0 13.3761467889908 3.41703343371168 0 55.6807339449541 21.0846266697552 0 0 0 chimp,elephant,horse,human,macaque,marmoset,orangutan,rabbit, processed_transcript processed_transcript A549@7.77154,AG04450@5.60477,BJ@1.01057,GM12878@2.73307,H1HESC@4.9512,HELAS3@12.7842,HEPG2@5.22921,HMEC@1.56795,HSMM@1.53685,HUVEC@3.10022,K562@0.140597,MCF7@2.78486,NHEK@2.15968,NHLF@7.20459,SKNSHRA@9.26342, 0 0 0 0 ENSG00000228106.1 ENST00000434872.1 chr1:223004322-223010726 3 546 5854 intergenic -0.58 1 0,0,1 0 0,0,0 58.5494505494505 3.41305090536385 80.792 13.3516483516484 1.01827810044414 14.768 45.0054945054945 3.31551076187222 49.68 0 0 chimp,elephant,horse,human,macaque,marmoset,orangutan,rabbit, processed_transcript processed_transcript A549@7.77154,AG04450@5.60477,BJ@1.01057,GM12878@2.73307,H1HESC@4.9512,HELAS3@12.7842,HEPG2@5.22921,HMEC@1.56795,HSMM@1.53685,HUVEC@3.10022,K562@0.140597,MCF7@2.78486,NHEK@2.15968,NHLF@7.20459,SKNSHRA@9.26342, 0 0 0 0 ENSG00000236846.1 ENST00000435108.1 chr1:223317391-223318296 2 611 292 intergenic 1.97 0 0,1,0 0 0,0,0 0 0 0 15.4664484451718 0 0 16.0523731587561 0 0 0 0 chimp,cow,elephant,horse,human,macaque,marmoset,orangutan,pig, lincRNA lincRNA A549@0,AG04450@0.00526,BJ@0,GM12878@0.225221,H1HESC@0.0135365,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0.187286,MCF7@0.00328,NHEK@0.0255293,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000226601.1 ENST00000446145.1 chr1:223354486-223361496 3 484 6522 intergenic -8.46 0 0,0,0 0 0,0,0 0 0 149.075 0 0 38.776 0 0 51.206 0 0 chimp,horse,human,macaque, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0.004813,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0.010485,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000185495.6 ENST00000449219.1 chr1:224183659-224197405 4 754 12986 intronic -5.48 0 0,0,0 0 0,0,0 0 0 0 0 11.492761435392 0 237.15649867374 41.6176651778839 225.576 0 0 cat,chimp,dog,guinea_pig,horse,human,macaque,marmoset,mouse,opossum,orangutan,pig,rabbit,rat, processed_transcript processed_transcript A549@1.80688,AG04450@1.00936,BJ@1.28402,GM12878@6.00609,H1HESC@3.36482,HELAS3@2.98911,HEPG2@4.64358,HMEC@0.173008,HSMM@0.98106,HUVEC@1.07076,K562@12.0501,MCF7@1.93369,NHEK@1.12052,NHLF@0.805956,SKNSHRA@1.35737, 0 0 0 0 ENSG00000185495.6 ENST00000540997.1 chr1:224196429-224198309 1 1880 0 intronic -8.34 0 0,0,1 0 0,0,0 0 0 0 0 0 0 0 0 0 0 1 chimp,human,macaque,orangutan, processed_transcript processed_transcript A549@1.80688,AG04450@1.00936,BJ@1.28402,GM12878@6.00609,H1HESC@3.36482,HELAS3@2.98911,HEPG2@4.64358,HMEC@0.173008,HSMM@0.98106,HUVEC@1.07076,K562@12.0501,MCF7@1.93369,NHEK@1.12052,NHLF@0.805956,SKNSHRA@1.35737, 0 0 0 0 ENSG00000232628.1 ENST00000453760.1 chr1:224396449-224398114 2 435 1228 intronic -12.95 1 0,0,1 0 0,0,0 0 12.1824104234528 0 0 3.63517915309446 2.893 0 5.98045602605863 10.143 0 0 chimp,human,macaque,marmoset,orangutan, sense_intronic sense_intronic A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0.576577,HEPG2@0.0803025,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0.10907,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000232628.1 ENST00000436706.1 chr1:224396449-224400981 2 788 3742 intronic -5.66 1 0,0,1 0 0,0,0 0 5.22661678246927 20.935 0 1.96606092998397 0 0 4.67316942811331 0 0 0 chimp,human,macaque,orangutan, sense_intronic sense_intronic A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0.576577,HEPG2@0.0803025,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0.10907,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000237101.1 ENST00000420350.1 chr1:224407315-224415745 3 1320 7106 exonic 0.08 1 0,0,1 0 0,0,0 0 0 0 3.225 0 0 4.44621212121212 0.176611314382212 0 0 0 chimp,human,macaque,orangutan, antisense antisense A549@0.0090855,AG04450@0.0314935,BJ@0.045783,GM12878@0.0318405,H1HESC@0.045023,HELAS3@0.0694435,HEPG2@0.0041235,HMEC@0,HSMM@0.017443,HUVEC@0.011027,K562@0.021259,MCF7@0.083436,NHEK@0.0582513,NHLF@0.007325,SKNSHRA@0.0629545, 0 0 0 0 ENSG00000233384.1 ENST00000437416.1 chr1:224802998-224803922 3 400 520 intronic -3.25 0 0,1,0 1 0,0,0 0 36.9230769230769 15.85 15.01 29.3365384615385 47.518 13.08 31.3653846153846 48.316 0 0 chimp,elephant,human,macaque,marmoset,orangutan,pig, antisense antisense A549@0.0161845,AG04450@0.034823,BJ@0.0194095,GM12878@0,H1HESC@0.130364,HELAS3@0,HEPG2@0,HMEC@0.134632,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0.0191233,NHLF@0.057119,SKNSHRA@0.108488, 0 0 0 0 ENSG00000229400.1 ENST00000431691.1 chr1:224905206-224918364 3 834 12320 exonic 8.09 0 0,0,0 0 0,0,0 76.8776978417266 7.46956168831169 114.84 86.9112709832134 3.19464285714286 9.685 82.2026378896882 6.58319805194805 10.057 0 0 chimp,horse,human,macaque,marmoset,orangutan,panda,pig, antisense antisense A549@0,AG04450@0,BJ@0,GM12878@0.026346,H1HESC@0.0090285,HELAS3@0.022423,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0.011257,SKNSHRA@0, 0 0 0 0 ENSG00000225334.1 ENST00000416908.1 chr1:224954602-224961043 2 421 6018 intronic -2.66 1 0,0,0 0 0,0,0 0 9.62927883017614 0 0 2.74759056164839 0 0 4.57128614157527 0 0 0 chimp,elephant,horse,human,macaque,marmoset,orangutan, antisense antisense A549@0.00653,AG04450@0.019296,BJ@0,GM12878@0,H1HESC@0.0275205,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0.0092255,SKNSHRA@0.06585, 0 0 0 0 ENSG00000234476.1 ENST00000428642.1 chr1:225634945-225653045 2 395 17703 intronic 4.13 0 0,0,0 0 0,0,0 0 0.553522001920578 0 0 1.43009659379766 1.38 0 1.50127097102186 1.458 0 0 chimp,human,macaque,marmoset,orangutan, sense_intronic sense_intronic A549@0,AG04450@0,BJ@0,GM12878@0.0206575,H1HESC@0,HELAS3@2.42996,HEPG2@0.921044,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000234476.1 ENST00000433058.1 chr1:225635693-225652985 2 654 16636 intronic -0.22 0 0,0,1 0 0,0,0 0 0.58902380379899 0 0 1.5218201490743 1.38 0 1.59755950949748 1.458 0 0 chimp,human,macaque,marmoset,orangutan, sense_intronic sense_intronic A549@0,AG04450@0,BJ@0,GM12878@0.0206575,H1HESC@0,HELAS3@2.42996,HEPG2@0.921044,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000227496.1 ENST00000448264.1 chr1:225888306-225939945 3 1527 50108 intronic -1.51 0 0,1,0 0 0,0,0 65.3267845448592 8.90306937016045 137.417 20.7308447937132 6.33228227029616 69.346 22.1178781925344 8.60411511135946 115.974 0 0 chimp,human,macaque,marmoset,orangutan, antisense antisense A549@0.025865,AG04450@0.0812045,BJ@0.0213145,GM12878@0,H1HESC@0,HELAS3@0.025112,HEPG2@0.002844,HMEC@0.008029,HSMM@0.076012,HUVEC@0,K562@0,MCF7@0,NHEK@0.0338453,NHLF@0.0304655,SKNSHRA@0.0224215, 0 0 0 0 ENSG00000226349.1 ENST00000428148.1 chr1:225898670-225923976 3 531 24771 intronic -3.70 0 0,1,0 0 0,0,0 34.4350282485876 8.28028743288523 29.172 53.0075329566855 5.23963505712325 10.574 54 8.76262565096282 14.866 0 0 cow,dog,horse,human,macaque,marmoset,pig,rabbit, sense_intronic sense_intronic A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0.0079405,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000225518.1 ENST00000412855.1 chr1:226274582-226277993 3 404 3003 intronic 2.19 0 0,0,1 0 0,0,0 57.5470297029703 7.74192474192474 0 32.4876237623762 1.66433566433566 0 54.5173267326733 3.12587412587413 0 0 0 human,orangutan, lincRNA processed_transcript A549@0.710943,AG04450@0.125734,BJ@0.333413,GM12878@0.092445,H1HESC@0.359884,HELAS3@0.075461,HEPG2@0.127505,HMEC@0.040242,HSMM@0.395669,HUVEC@0,K562@0.175297,MCF7@1.33991,NHEK@0.14291,NHLF@0.148388,SKNSHRA@1.47476, 0 0 0 0 ENSG00000234478.1 ENST00000440540.1 chr1:226335704-226342772 2 533 6533 exonic -7.13 1 0,0,1 0 0,0,0 127.09756097561 0 0 143.722326454034 25.8330016837594 0 141.577861163227 26.1873564977805 0 0 0 cat,chimp,cow,dog,elephant,guinea_pig,horse,human,macaque,marmoset,mouse,opossum,orangutan,panda,rabbit,rat, antisense antisense A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0.007802,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0.0065325,K562@0,MCF7@0.011274,NHEK@0.0245137,NHLF@0.0036065,SKNSHRA@0, 0 0 0 0 ENSG00000228382.1 ENST00000443422.1 chr1:226844341-226847371 2 717 2311 intronic -8.73 0 0,0,0 0 0,0,0 0 78.8745131977499 56.054 0 27.7395067070532 31.912 0 31.4686282994375 24.262 0 0 chimp,cow,horse,human,macaque,marmoset,orangutan,rabbit, sense_intronic sense_intronic A549@0.033745,AG04450@0,BJ@0,GM12878@0.089632,H1HESC@0.012764,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0.118624,K562@0,MCF7@0.233649,NHEK@0.084927,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000228382.1 ENST00000412918.1 chr1:226844381-226862768 2 744 17641 intronic -8.73 0 0,0,0 0 0,0,0 0 21.2317328949606 53.64 0 16.8903123405703 67.269 0 17.6633977665665 77.45 0 0 chimp,cow,horse,human,macaque,marmoset,orangutan,rabbit, sense_intronic sense_intronic A549@0.033745,AG04450@0,BJ@0,GM12878@0.089632,H1HESC@0.012764,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0.118624,K562@0,MCF7@0.233649,NHEK@0.084927,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000228548.1 ENST00000453525.1 chr1:226856598-226864046 2 536 6910 intronic 0.76 0 0,0,0 0 0,0,0 21.2686567164179 9.47467438494935 0 36.0503731343284 20.3583212735166 0 35.7817164179104 22.7095513748191 0 0 0 chimp,guinea_pig,human,macaque,marmoset,mouse,orangutan,rat, antisense antisense A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000233706.1 ENST00000433837.1 chr1:227179841-227180907 3 437 625 exonic 4.02 1 0,1,1 0 0,0,0 0 0 26.163 0 11.8272 11.502 0 12.416 11.862 0 0 chimp,human,macaque,marmoset,orangutan,rabbit, antisense antisense A549@0.0481485,AG04450@0,BJ@0,GM12878@0,H1HESC@0.0270165,HELAS3@0,HEPG2@0.0247975,HMEC@0,HSMM@0,HUVEC@0,K562@0.011164,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0.016444, 0 0 0 0 ENSG00000228625.1 ENST00000424451.1 chr1:227366034-227371145 3 811 4296 intronic -1.51 0 0,0,0 0 0,0,0 0 1.99464618249534 0 0 1.73463687150838 0 0 9.62872439478585 0 0 0 chimp,human,marmoset, antisense antisense A549@0,AG04450@0.0158455,BJ@0,GM12878@0,H1HESC@0.005097,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0.0127315,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000234277.2 ENST00000445817.1 chr1:227581292-227618736 4 1967 35471 intergenic 6.42 1 0,0,1 0 0,0,0 40.7890188103711 10.8360914549914 0 65.1652262328419 24.8920244706944 9.936 220.092018301983 30.0809957430013 10.62 0 0 chimp,human,macaque,orangutan, processed_transcript processed_transcript A549@0.007401,AG04450@0,BJ@0,GM12878@0.002193,H1HESC@0.004019,HELAS3@0.001866,HEPG2@0.0074325,HMEC@0,HSMM@0.0068265,HUVEC@0.0860165,K562@0.007863,MCF7@0,NHEK@0.0108723,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000234277.2 ENST00000436377.1 chr1:227597466-227613758 2 420 15870 intergenic -0.18 1 0,0,0 0 0,0,0 0 16.9525519848771 0 0 40.3667926906112 0 6.30952380952381 50.0354127284184 0 0 0 chimp,elephant,human,macaque,marmoset,orangutan, processed_transcript processed_transcript A549@0.007401,AG04450@0,BJ@0,GM12878@0.002193,H1HESC@0.004019,HELAS3@0.001866,HEPG2@0.0074325,HMEC@0,HSMM@0.0068265,HUVEC@0.0860165,K562@0.007863,MCF7@0,NHEK@0.0108723,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000227711.1 ENST00000422837.1 chr1:227698297-227708178 6 613 9258 intergenic 3.72 0 0,0,0 0 0,0,0 0 0 0 0 0 0 0 2.09613307409808 0 0 0 chimp,human,macaque,orangutan, lincRNA lincRNA A549@0,AG04450@0.026046,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0.045839, 0 0 0 0 ENSG00000230005.1 ENST00000413347.1 chr1:227931532-227934892 2 1706 1652 intronic 3.84 0 0,0,0 0 0,0,0 0 0 0 0 0 0 0 0 0 0 0 chimp,human,macaque,orangutan, sense_intronic sense_intronic A549@0.116484,AG04450@0.068343,BJ@0.047819,GM12878@0.138447,H1HESC@0.252445,HELAS3@0.158142,HEPG2@0.148228,HMEC@0.005195,HSMM@0.0382965,HUVEC@0.0784015,K562@0.0929865,MCF7@0.153659,NHEK@0.017156,NHLF@0.218997,SKNSHRA@0.401628, 0 0 0 0 ENSG00000233181.1 ENST00000425317.1 chr1:228454507-228455299 2 661 129 intronic 7.22 0 0,0,0 0 0,0,0 0 0 0 0 0 0 0 0 0 0 0 NA antisense antisense A549@0.0179415,AG04450@0.035305,BJ@0.0309265,GM12878@0.0024315,H1HESC@0.333,HELAS3@0.02099,HEPG2@0.007971,HMEC@0,HSMM@0.0235785,HUVEC@0,K562@0.138648,MCF7@0.008609,NHEK@0.0916217,NHLF@0.003166,SKNSHRA@0.102938, 0 0 0 0 ENSG00000235732.2 ENST00000423406.2 chr1:228544748-228546097 2 417 930 intronic -9.14 0 0,1,0 0 0,0,0 0 0 45.36 0 0 65.069 0 0 67.859 0 0 chimp,horse,human,macaque,marmoset,orangutan,panda,pig, sense_intronic sense_intronic A549@0.012861,AG04450@0.0042285,BJ@0.007419,GM12878@0,H1HESC@0.658457,HELAS3@0.148403,HEPG2@0.299785,HMEC@0.004711,HSMM@0.0046695,HUVEC@0,K562@0,MCF7@0.028999,NHEK@0.00761267,NHLF@0,SKNSHRA@0.247707, 0 0 0 0 ENSG00000231563.1 ENST00000436779.1 chr1:228595082-228597395 3 280 2029 exonic 6.14 0 0,0,0 0 0,0,0 52.5714285714286 17.570724494825 109.581 75.1 69.7008378511582 114.504 106.989285714286 75.6037456875308 115.092 0 0 chimp,cow,dog,horse,human,macaque,marmoset,mouse,orangutan,pig,rabbit, antisense antisense A549@0.0860875,AG04450@0.24752,BJ@0.141555,GM12878@0.288135,H1HESC@0.120433,HELAS3@0.091484,HEPG2@0.0862255,HMEC@0,HSMM@0,HUVEC@0.0777075,K562@0.114059,MCF7@0.218297,NHEK@0.149897,NHLF@0.0068945,SKNSHRA@0.238513, 0 0 0 0 ENSG00000236975.1 ENST00000433734.1 chr1:229228562-229230652 2 597 1491 intergenic 3.03 0 0,0,1 0 0,0,0 0 0 0 0 0 2.629 0 0 2.761 0 0 chimp,dog,guinea_pig,horse,human,macaque,marmoset,orangutan,rabbit, lincRNA lincRNA A549@0,AG04450@0.0098845,BJ@0.0082205,GM12878@0,H1HESC@0.049669,HELAS3@0.068677,HEPG2@0.007114,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@1.63374,NHEK@0,NHLF@0.071317,SKNSHRA@0.0075755, 0 0 0 0 ENSG00000233920.1 ENST00000430677.1 chr1:229359208-229363309 2 790 3309 intergenic -2.04 0 0,0,0 0 0,0,0 0 0 0 0 0.674524025385313 3.355 0 8.95889996977939 3.399 0 0 chimp,cow,horse,human,marmoset,panda, antisense antisense A549@0.02555,AG04450@0,BJ@0.006217,GM12878@0,H1HESC@0.024995,HELAS3@0.028861,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0.006761,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0.0028645, 0 0 0 0 ENSG00000177788.5 ENST00000429227.1 chr1:229394028-229406750 2 866 11854 intergenic -0.87 1 1,1,1 1 0,0,0 0 0 28.09 0 0.585793824869242 52.192 0 0.691074742702885 59.494 0 0 chimp,cow,dog,elephant,horse,human,macaque,marmoset, processed_transcript processed_transcript A549@0.341515,AG04450@0.10712,BJ@0.104866,GM12878@0.0154995,H1HESC@0.133691,HELAS3@0.271668,HEPG2@0.279492,HMEC@0.079869,HSMM@0.085885,HUVEC@0.0772705,K562@2.72175,MCF7@0.144978,NHEK@0.110997,NHLF@0.0681195,SKNSHRA@0.290699, 0 0 0 0 ENSG00000177788.5 ENST00000436334.1 chr1:229405113-229406775 2 313 1347 intergenic 0 0 1,1,1 1 0,0,0 0 0 28.09 0 0 52.192 3.00319488817891 0 59.494 0 0 chimp,dog,elephant,human,macaque,marmoset,orangutan,rabbit, processed_transcript processed_transcript A549@0.341515,AG04450@0.10712,BJ@0.104866,GM12878@0.0154995,H1HESC@0.133691,HELAS3@0.271668,HEPG2@0.279492,HMEC@0.079869,HSMM@0.085885,HUVEC@0.0772705,K562@2.72175,MCF7@0.144978,NHEK@0.110997,NHLF@0.0681195,SKNSHRA@0.290699, 0 0 0 0 ENSG00000237481.1 ENST00000418348.1 chr1:229455150-229458834 2 638 3044 exonic 3.23 0 0,0,1 0 0,0,0 0 0 0 0 5.22141918528252 2.55 0 11.1412614980289 3.808 0 0 elephant,horse,human,macaque,marmoset,orangutan,rabbit, antisense antisense A549@0.170266,AG04450@0.226288,BJ@0.11025,GM12878@0.052833,H1HESC@0.138392,HELAS3@0.34873,HEPG2@0.709829,HMEC@0,HSMM@0.0235455,HUVEC@0.242978,K562@0.47778,MCF7@0.180806,NHEK@0.506275,NHLF@0.139479,SKNSHRA@0.214627, 0 0 0 0 ENSG00000226920.1 ENST00000434311.1 chr1:229576031-229576767 2 476 258 intergenic 10.01 0 1,1,1 0 0,0,0 0 0 30.115 20.9810924369748 0 35.682 43.3487394957983 7.53488372093023 55.37 0 0 chimp,dog,horse,human,marmoset,orangutan,panda, lincRNA lincRNA A549@1.60933,AG04450@0.629943,BJ@0.656913,GM12878@0.564623,H1HESC@1.58028,HELAS3@1.52082,HEPG2@1.49255,HMEC@1.69128,HSMM@0.70271,HUVEC@0.99314,K562@1.18581,MCF7@0.887694,NHEK@0.789867,NHLF@0.514306,SKNSHRA@0.95853, 0 0 0 0 ENSG00000223635.1 ENST00000417605.1 chr1:229644248-229650019 3 588 5179 intergenic 1.46 0 1,1,1 0 0,0,0 0 0 8.14 0 0 29.879 0 0 38.072 0 0 chimp,human,macaque,marmoset,orangutan, antisense antisense A549@0.0720615,AG04450@0.0176035,BJ@0.0083315,GM12878@0.281568,H1HESC@0.301812,HELAS3@0.105127,HEPG2@0.16516,HMEC@0.006928,HSMM@0,HUVEC@0.120121,K562@0.33063,MCF7@0.0242755,NHEK@0.00877767,NHLF@0.0065295,SKNSHRA@0.035043, 0 0 0 0 ENSG00000227043.1 ENST00000435973.1 chr1:230011297-230021499 2 383 9817 intergenic 2.58 0 0,0,1 0 0,0,0 0 8.96169909340939 0 0 6.28094122440664 0 0 8.94356728124682 0 0 0 chimp,elephant,human,macaque,marmoset,orangutan, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000228058.1 ENST00000445339.1 chr1:230138477-230142909 2 652 3778 intergenic 1.16 1 0,0,0 0 0,0,0 0 0 0 0 0 8.4 0 0 8.764 0 0 cow,horse,human,macaque,marmoset,orangutan, lincRNA lincRNA A549@0,AG04450@0.0181065,BJ@0,GM12878@0,H1HESC@0,HELAS3@0.0071475,HEPG2@0.0166835,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0.003144,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000227006.1 ENST00000440729.1 chr1:230394440-230404229 3 858 8927 intronic 1.03 0 0,0,1 0 0,0,0 0 11.9829730032486 0 0 12.2781449535118 0 0 17.4817967962361 0 0 0 chimp,human,macaque,marmoset,orangutan, antisense antisense A549@0,AG04450@0.003745,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0.00239,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0.010559, 0 0 0 0 ENSG00000224407.1 ENST00000414640.1 chr1:230416058-230417639 2 1027 552 exonic -0.01 0 0,0,1 0 0,0,0 19.0214216163583 0 118.16 20.5793573515093 0 120.512 37.7351509250243 0 130.135 0 0 chimp,human,macaque,marmoset,orangutan, antisense antisense A549@0.026358,AG04450@0.013722,BJ@0.00629,GM12878@0,H1HESC@0.0057165,HELAS3@0.012588,HEPG2@0.0103965,HMEC@0,HSMM@0.003702,HUVEC@0,K562@0.0071605,MCF7@0,NHEK@0.0104807,NHLF@0.051313,SKNSHRA@0.010312, 0 0 0 0 ENSG00000232964.1 ENST00000412647.1 chr1:230728406-230731329 2 401 2520 intergenic 5.65 0 0,0,0 0 0,0,0 0 0 0 13.354114713217 0 0 14.2443890274314 0 0 0 0 chimp,human,orangutan, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000244137.1 ENST00000452640.1 chr1:230911827-230930899 3 847 18221 intronic -0.04 1 0,0,0 0 0,0,0 0 7.29542835190165 44.763 0 17.2475714834532 34.858 0 20.8719060424785 46.682 1 1 chimp,human,macaque,marmoset,orangutan, processed_transcript processed_transcript A549@0.003248,AG04450@0.0034585,BJ@0.0555775,GM12878@0,H1HESC@0.002287,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0.178916,HUVEC@0,K562@0,MCF7@0.0065925,NHEK@0,NHLF@0.102964,SKNSHRA@0, 0 0 0 0 ENSG00000244137.1 ENST00000428480.1 chr1:230911847-230930883 2 671 18363 intronic -2.57 1 0,1,0 0 0,0,0 0 7.23901323313184 44.763 0 17.1141970266296 34.858 0 20.7105048194739 46.682 0 0 NA processed_transcript processed_transcript A549@0.003248,AG04450@0.0034585,BJ@0.0555775,GM12878@0,H1HESC@0.002287,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0.178916,HUVEC@0,K562@0,MCF7@0.0065925,NHEK@0,NHLF@0.102964,SKNSHRA@0, 0 0 0 0 ENSG00000225656.1 ENST00000436739.1 chr1:230959387-230960453 2 309 755 intergenic 4.93 0 0,1,0 0 0,0,0 0 0 20.09 0 0 1.984 0 0 2.072 0 0 chimp,human,macaque,marmoset,orangutan, lincRNA lincRNA A549@0.0108445,AG04450@0.019038,BJ@0.119954,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0.006264,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000223393.1 ENST00000439341.1 chr1:231010592-231014761 3 791 3374 intergenic -0.57 1 0,0,1 0 0,0,0 0 0 7.106 4.83565107458913 1.63692946058091 0 17.1251580278129 3.0515708358032 0 0 0 chimp,human,macaque,marmoset,orangutan, antisense antisense A549@0.108177,AG04450@0.10161,BJ@0.212143,GM12878@0,H1HESC@0.557889,HELAS3@0.078869,HEPG2@0.220193,HMEC@0.010314,HSMM@0.205515,HUVEC@0.0284345,K562@0.0061865,MCF7@0.26279,NHEK@0.00332533,NHLF@0.0973415,SKNSHRA@0.1334, 0 0 0 0 ENSG00000235710.3 ENST00000425559.1 chr1:231319844-231323373 3 1345 2180 intronic 1.63 1 0,0,0 0 0,0,0 0 0 0 0 0 0 0 0 0 0 0 chimp,human,macaque,marmoset,orangutan, antisense antisense A549@0.002502,AG04450@0,BJ@0,GM12878@0,H1HESC@0.012954,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0.001173, 0 0 0 0 ENSG00000235710.3 ENST00000541173.1 chr1:231319851-231322143 1 2292 0 intronic 1.63 1 0,0,0 0 0,0,0 0 0 0 0 0 0 0 0 0 0 0 cat,chimp,human,marmoset,orangutan, antisense antisense A549@0.002502,AG04450@0,BJ@0,GM12878@0,H1HESC@0.012954,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0.001173, 0 0 0 0 ENSG00000233461.1 ENST00000416221.1 chr1:231658134-231664302 3 462 5702 exonic 8.72 0 1,1,1 1 0,0,0 26.8398268398268 1.08733777621887 52.668 2.58658008658009 2.27762188705717 82.637 2.62987012987013 8.79919326552087 70.872 0 0 chimp,human,macaque,marmoset,orangutan, antisense antisense A549@8.79293,AG04450@1.23001,BJ@0.994044,GM12878@1.78641,H1HESC@1.33777,HELAS3@2.80849,HEPG2@3.01963,HMEC@4.51288,HSMM@1.33317,HUVEC@1.41651,K562@3.47945,MCF7@0.831203,NHEK@6.23927,NHLF@0.950655,SKNSHRA@1.72976, 0 0 0 0 ENSG00000233461.1 ENST00000440665.1 chr1:231658207-231664001 4 412 5376 intergenic 8.72 1 0,1,1 0 0,0,0 30.0970873786408 1.15327380952381 8.778 0 1.83779761904762 27.869 0 8.73325892857143 26.986 0 0 cat,chimp,dog,human,marmoset,orangutan,pig, antisense antisense A549@8.79293,AG04450@1.23001,BJ@0.994044,GM12878@1.78641,H1HESC@1.33777,HELAS3@2.80849,HEPG2@3.01963,HMEC@4.51288,HSMM@1.33317,HUVEC@1.41651,K562@3.47945,MCF7@0.831203,NHEK@6.23927,NHLF@0.950655,SKNSHRA@1.72976, 0 0 0 0 ENSG00000233461.1 ENST00000450783.1 chr1:231658207-231664042 3 427 5404 intergenic 8.72 1 0,1,1 0 0,0,0 29.03981264637 1.14729829755736 25.137 0 1.82827535159141 49.886 0 8.6880088823094 48.839 0 0 cat,chimp,dog,human,macaque,orangutan, antisense antisense A549@8.79293,AG04450@1.23001,BJ@0.994044,GM12878@1.78641,H1HESC@1.33777,HELAS3@2.80849,HEPG2@3.01963,HMEC@4.51288,HSMM@1.33317,HUVEC@1.41651,K562@3.47945,MCF7@0.831203,NHEK@6.23927,NHLF@0.950655,SKNSHRA@1.72976, 0 0 0 0 ENSG00000233461.1 ENST00000454631.1 chr1:231658263-231664302 4 454 5579 exonic -7.55 1 1,1,1 1 0,0,0 27.3127753303965 1.11131027065782 52.668 2.63215859030837 2.32783652984406 82.637 2.67621145374449 8.99318874350242 70.872 0 0 chimp,horse,human,macaque,marmoset,orangutan, antisense antisense A549@8.79293,AG04450@1.23001,BJ@0.994044,GM12878@1.78641,H1HESC@1.33777,HELAS3@2.80849,HEPG2@3.01963,HMEC@4.51288,HSMM@1.33317,HUVEC@1.41651,K562@3.47945,MCF7@0.831203,NHEK@6.23927,NHLF@0.950655,SKNSHRA@1.72976, 0 0 0 0 ENSG00000233461.1 ENST00000425412.1 chr1:231662852-231664247 2 390 1003 intergenic 1.97 0 1,1,1 1 0,0,0 31.7948717948718 6.1814556331007 52.668 0 3.09770687936191 83.832 0 3.21335992023928 72.087 0 0 chimp,elephant,horse,human,macaque,marmoset,orangutan, antisense antisense A549@8.79293,AG04450@1.23001,BJ@0.994044,GM12878@1.78641,H1HESC@1.33777,HELAS3@2.80849,HEPG2@3.01963,HMEC@4.51288,HSMM@1.33317,HUVEC@1.41651,K562@3.47945,MCF7@0.831203,NHEK@6.23927,NHLF@0.950655,SKNSHRA@1.72976, 0 0 0 0 ENSG00000229228.1 ENST00000448058.1 chr1:231727038-231747836 2 595 20201 intergenic -1.54 1 0,0,0 0 0,0,0 10.1865546218487 6.09732191475669 0 2.00840336134454 5.87797633780506 0 11.1210084033613 6.50269788624326 0 0 0 chimp,dog,elephant,human,macaque,marmoset,orangutan,panda,rabbit, antisense antisense A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000226758.1 ENST00000456782.1 chr1:232061580-232080979 4 758 18635 intronic -1.76 0 0,0,0 0 0,0,0 0 16.9703783203649 0 0 11.6618191574993 0 0 12.5365173061444 0 0 0 chimp,human,marmoset,orangutan, sense_intronic sense_intronic A549@0.0168535,AG04450@0.023176,BJ@0.0341375,GM12878@0,H1HESC@0,HELAS3@0.020008,HEPG2@0.028373,HMEC@0,HSMM@0,HUVEC@0.096051,K562@0,MCF7@0.024596,NHEK@0.00359067,NHLF@0,SKNSHRA@0.069662, 0 0 0 0 ENSG00000235152.1 ENST00000428673.1 chr1:232295837-232321389 3 815 24733 intergenic -0.48 0 0,0,0 0 0,0,0 0 2.3840213479966 13.42 0 3.36505882828609 9.406 0 4.57817490801763 21.357 0 0 chimp,horse,human,macaque,orangutan, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0.0071505,H1HESC@14.7043,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0.005945,K562@0,MCF7@0,NHEK@0,NHLF@0.0095415,SKNSHRA@0, 0 0 0 0 ENSG00000236372.1 ENST00000441459.1 chr1:232310678-232315859 2 2239 2940 intergenic -0.79 0 0,0,1 0 0,0,0 13.2648503796338 0 0 5.00223313979455 0 0 8.85529254131309 0 0 0 0 chimp,human,macaque,marmoset,orangutan, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0.008313,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000234991.1 ENST00000451867.1 chr1:232447238-232448857 2 1080 537 intergenic -1.66 0 0,1,1 0 0,0,0 0 0 0 0 0 0 0 0 0 0 0 chimp,dog,elephant,human,macaque,marmoset,orangutan,panda,rabbit, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0.284977,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000225919.1 ENST00000430921.1 chr1:232853817-232857996 3 369 3806 intergenic -1.91 1 0,1,0 0 0,0,0 0 0 0 0 1.13899106673673 0 0 1.18365738307935 0 0 0 chimp,horse,human,macaque,marmoset,orangutan,panda,pig, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000236497.1 ENST00000457698.1 chr1:232863000-232878461 4 2038 13417 intergenic 4.94 0 0,0,0 0 0,0,0 0 4.23090109562495 0 0 0.240292166654245 0 0 0.256763807110382 0 0 0 chimp,horse,human,macaque,marmoset,orangutan, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000234453.1 ENST00000452766.1 chr1:234086184-234086853 2 595 72 intronic 0 0 0,0,0 0 0,0,0 0 0 0 0 0 0 0 0 0 0 0 chimp,elephant,horse,human,macaque,orangutan,panda, antisense antisense A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000233332.1 ENST00000412483.1 chr1:234348352-234350834 2 1721 759 intronic 0.82 0 0,0,0 0 0,0,0 0 214.616600790514 0 3.89715281812899 126.993412384717 0 3.88611272515979 182.31884057971 0 0 0 chimp,elephant,horse,human,marmoset,orangutan,pig, lincRNA processed_transcript A549@0,AG04450@0,BJ@0,GM12878@0.001541,H1HESC@0.364243,HELAS3@0,HEPG2@0,HMEC@0.125952,HSMM@0,HUVEC@0,K562@0.0063275,MCF7@0.0188815,NHEK@0.0587727,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000231272.1 ENST00000456078.1 chr1:234397452-234410211 2 450 12307 intronic -10.38 0 0,0,0 0 0,0,0 0 1.04655886893638 0 0 1.68229462907289 0 0 1.81473957910132 0 0 0 chimp,human,macaque,orangutan, sense_intronic sense_intronic A549@0.047242,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000236244.1 ENST00000446433.1 chr1:234404329-234408246 2 386 3529 intronic -1.84 0 0,0,1 0 0,0,0 0 0 0 0 4.28988381977897 0 0 4.73193539246245 0 0 0 chimp,human,macaque,marmoset,orangutan, antisense antisense A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000236358.1 ENST00000425104.1 chr1:234492752-234501574 2 408 8412 intergenic 3.41 0 0,1,0 1 0,0,0 0 0 25.792 50.6838235294118 3.50427960057061 57.409 154.205882352941 5.99488825487399 231.919 0 0 chimp,elephant,horse,human,macaque,marmoset,mouse,orangutan,panda,rat, antisense antisense A549@0.468234,AG04450@0,BJ@0,GM12878@1.08167,H1HESC@0,HELAS3@0.034203,HEPG2@0.239995,HMEC@0.069908,HSMM@0,HUVEC@0,K562@0,MCF7@0.10431,NHEK@0.115199,NHLF@0,SKNSHRA@0.458971, 0 0 0 0 ENSG00000231663.1 ENST00000451795.1 chr1:234508553-234509339 2 573 211 exonic 1.48 1 1,1,1 0 0,0,0 0 0 56.772 6.55671902268761 0 41.167 6.69284467713787 0 45.729 0 0 chimp,human,macaque,marmoset,orangutan, antisense antisense A549@1.58466,AG04450@0.709817,BJ@0.508331,GM12878@1.46982,H1HESC@0.789229,HELAS3@1.81612,HEPG2@1.5583,HMEC@0.605292,HSMM@0.460011,HUVEC@0.862289,K562@2.61515,MCF7@0.609029,NHEK@0.375128,NHLF@0.454503,SKNSHRA@1.28231, 0 0 0 0 ENSG00000231768.1 ENST00000435574.1 chr1:234663637-234667525 3 2857 1027 intergenic -0.87 1 1,1,1 0 0,0,0 4.99824991249563 0 154.275 3.84319215960798 0 69.889 6.59257962898145 0 91.469 0 0 chimp,human,macaque,marmoset,orangutan, lincRNA lincRNA A549@0,AG04450@0.047943,BJ@0.0383935,GM12878@0.000705,H1HESC@0,HELAS3@0.005618,HEPG2@0,HMEC@0.020365,HSMM@0.058312,HUVEC@0.0361835,K562@0.0046805,MCF7@0.0041105,NHEK@0.089452,NHLF@0.0305395,SKNSHRA@0.0060965, 0 0 0 0 ENSG00000231768.1 ENST00000421207.1 chr1:234665688-234667511 3 802 1017 intergenic -4.66 0 1,1,1 0 0,0,0 0 0 150.257 0 0 69.889 0 0 91.469 0 0 chimp,horse,human,macaque,marmoset,orangutan, lincRNA lincRNA A549@0,AG04450@0.047943,BJ@0.0383935,GM12878@0.000705,H1HESC@0,HELAS3@0.005618,HEPG2@0,HMEC@0.020365,HSMM@0.058312,HUVEC@0.0361835,K562@0.0046805,MCF7@0.0041105,NHEK@0.089452,NHLF@0.0305395,SKNSHRA@0.0060965, 0 0 0 0 ENSG00000230404.1 ENST00000429507.1 chr1:234701044-234705834 2 388 4400 intergenic -3.44 1 0,0,1 0 0,0,0 0 0 50.292 4.92783505154639 1.115 47.912 5.01030927835052 1.15545454545455 51.422 0 0 chimp,elephant,horse,human,macaque,marmoset,orangutan, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000228830.1 ENST00000436039.1 chr1:234742754-234745229 2 691 1782 exonic 2.79 0 1,1,1 0 0,0,0 704.552821997106 275.478114478114 635.614 683.528219971056 296.925364758698 415.003 639.160636758321 400.310325476992 434.951 0 0 cat,chimp,cow,dog,elephant,guinea_pig,horse,human,macaque,marmoset,mouse,opossum,orangutan,panda,pig,platypus,rabbit, antisense antisense A549@0.015223,AG04450@0,BJ@0.0093395,GM12878@0.091642,H1HESC@0,HELAS3@0.0120465,HEPG2@0.026902,HMEC@0.011817,HSMM@0,HUVEC@0.036469,K562@0,MCF7@0.005063,NHEK@0.00558467,NHLF@0.0070015,SKNSHRA@0.0481515, 0 0 0 0 ENSG00000224939.1 ENST00000429269.1 chr1:234765057-234770526 2 2268 3199 intergenic 4.82 1 0,0,1 0 0,0,0 5.55555555555556 0 0 20.8487654320988 2.79087214754611 0 38.2914462081129 2.07095967489841 0 0 0 chimp,elephant,human,macaque,marmoset,orangutan, lincRNA non_coding A549@0.0206905,AG04450@0.0347345,BJ@0.003198,GM12878@0.025402,H1HESC@0.0058355,HELAS3@0.020888,HEPG2@0.0720555,HMEC@0.003608,HSMM@0.188688,HUVEC@0.017378,K562@0.006882,MCF7@0.125754,NHEK@0.00348467,NHLF@0.0051,SKNSHRA@0.015476, 0 0 0 0 ENSG00000228044.2 ENST00000417805.1 chr1:234782035-234796670 4 1369 13260 intergenic 4.06 1 0,0,1 0 0,0,0 0 13.3549773755656 0 4.55807158509861 12.7101055806938 9.972 6.38860482103725 14.2039969834087 10.626 0 0 chimp,human,macaque,marmoset,orangutan, lincRNA processed_transcript A549@0,AG04450@0,BJ@0,GM12878@0.0031945,H1HESC@0.0024205,HELAS3@0.122077,HEPG2@0.0112735,HMEC@0.050547,HSMM@0,HUVEC@0,K562@0,MCF7@0.008136,NHEK@0.123558,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000228044.2 ENST00000449012.1 chr1:234791871-234816868 2 419 24576 intergenic 3.05 1 0,1,0 0 0,0,0 0 20.3055419921875 0 6.10501193317422 9.1722412109375 7.101 7.46062052505967 23.7220052083333 7.892 0 0 elephant,guinea_pig,human,orangutan,rabbit, lincRNA processed_transcript A549@0,AG04450@0,BJ@0,GM12878@0.0031945,H1HESC@0.0024205,HELAS3@0.122077,HEPG2@0.0112735,HMEC@0.050547,HSMM@0,HUVEC@0,K562@0,MCF7@0.008136,NHEK@0.123558,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000241475.1 ENST00000441360.1 chr1:234796017-234802850 3 930 5899 intergenic 1.07 0 0,1,1 0 0,0,0 66.0043010752688 19.506696050178 0 9.43010752688172 13.0167825055094 12.348 9.80645161290323 68.7719952534328 12.642 0 0 chimp,cow,horse,human,macaque,marmoset,orangutan,panda, lincRNA processed_transcript A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0.0084125,HELAS3@0.170625,HEPG2@0.0266245,HMEC@0.013389,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0.296556,NHLF@0.002068,SKNSHRA@0, 0 0 0 0 ENSG00000230628.1 ENST00000442382.1 chr1:234805269-234831900 2 3562 23067 intergenic -1.01 0 0,1,0 0 0,0,0 42.029197080292 4.35353535353535 0 9.08899494665918 4.34018294533316 1.578 11.4438517686693 5.28161442753717 1.59 0 0 chimp,cow,dog,elephant,horse,human,macaque,pig, lincRNA lincRNA A549@0.000609,AG04450@0,BJ@0,GM12878@0.665112,H1HESC@0,HELAS3@0.0023425,HEPG2@0.087786,HMEC@0,HSMM@0,HUVEC@0,K562@0.0148095,MCF7@0.001154,NHEK@0.002198,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000228044.2 ENST00000453568.1 chr1:234809842-234818922 3 628 8448 intergenic 2.37 1 0,0,1 0 0,0,0 0 3.29616477272727 0 0 0.884943181818182 0 0 3.12038352272727 0 0 0 chimp,human,macaque,orangutan, lincRNA processed_transcript A549@0,AG04450@0,BJ@0,GM12878@0.0031945,H1HESC@0.0024205,HELAS3@0.122077,HEPG2@0.0112735,HMEC@0.050547,HSMM@0,HUVEC@0,K562@0,MCF7@0.008136,NHEK@0.123558,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000224037.1 ENST00000457051.1 chr1:234845005-234851761 3 2532 4220 intergenic -0.20 0 0,0,0 0 0,0,0 29.0580568720379 0 0 15.6330963665087 3.2345971563981 0 15.879541864139 3.55616113744076 0 0 0 chimp,horse,human,marmoset,orangutan, lincRNA processed_transcript A549@0,AG04450@0,BJ@0,GM12878@0.0094985,H1HESC@0,HELAS3@0.0332805,HEPG2@0.097358,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0.0114347,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000224037.1 ENST00000422414.1 chr1:234845135-234855723 4 1004 9578 intergenic 1.44 0 0,0,0 0 0,0,0 21.6852589641434 15.4275422844018 0 30.8705179282869 16.3619753602005 0 31.0916334661355 17.2032783462101 0 0 0 chimp,cow,dog,horse,human,macaque,marmoset,orangutan,pig, lincRNA processed_transcript A549@0,AG04450@0,BJ@0,GM12878@0.0094985,H1HESC@0,HELAS3@0.0332805,HEPG2@0.097358,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0.0114347,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000227630.1 ENST00000437601.1 chr1:234861148-234867390 2 3572 2668 intergenic 10.96 1 0,1,1 0 0,0,0 0 24.452023988006 309.264 3.05543113101904 25.1454272863568 186.337 2.94960806270997 30.4823838080959 209.384 0 0 chimp,horse,human,macaque,marmoset,orangutan, lincRNA processed_transcript A549@0.018694,AG04450@0.0204235,BJ@0.0027555,GM12878@0.053324,H1HESC@0.019435,HELAS3@0.406563,HEPG2@0.39323,HMEC@0.002291,HSMM@0,HUVEC@0.15368,K562@0.186773,MCF7@0.183684,NHEK@0.021908,NHLF@0.0081345,SKNSHRA@0.065351, 0 0 0 0 ENSG00000237520.1 ENST00000423963.1 chr1:235092978-235095736 2 421 2335 intergenic 2.52 0 0,1,1 0 0,0,0 154.377672209026 23.8154175588865 56.144 150.49406175772 11.8783725910064 26.19 151.228028503563 14.1875802997859 25.65 0 0 cat,chimp,cow,dog,elephant,horse,human,macaque,marmoset,orangutan,pig,rabbit, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@2.98759,H1HESC@0,HELAS3@0,HEPG2@0.0051435,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0.0338095,NHEK@0,NHLF@0,SKNSHRA@0.0107275, 0 0 0 0 ENSG00000238005.1 ENST00000418557.1 chr1:235093089-235099746 4 885 5766 intergenic -1.46 0 0,0,1 0 0,0,0 93.8485875706215 62.8263961151578 14.144 2.30508474576271 56.4314949705168 52.228 78.5028248587571 61.9112036073534 56.046 0 0 chimp,cow,horse,human,macaque,marmoset,mouse,orangutan,pig, lincRNA lincRNA A549@0.591757,AG04450@0.127693,BJ@0.038794,GM12878@0.542639,H1HESC@0,HELAS3@0.175923,HEPG2@0.657439,HMEC@0.014782,HSMM@0.023086,HUVEC@0.038453,K562@0.025408,MCF7@0.0869755,NHEK@0.00445533,NHLF@0.0197505,SKNSHRA@0.126875, 0 0 0 0 ENSG00000238005.1 ENST00000423988.1 chr1:235095408-235099574 2 315 3849 intergenic 2.53 1 1,1,1 0 0,0,0 53.7555555555556 76.0904130943102 14.144 8.98412698412698 77.1260067550013 52.228 71.9079365079365 84.149649259548 56.046 0 0 cat,chimp,cow,dog,elephant,guinea_pig,horse,human,macaque,marmoset,orangutan,pig,rabbit, lincRNA lincRNA A549@0.591757,AG04450@0.127693,BJ@0.038794,GM12878@0.542639,H1HESC@0,HELAS3@0.175923,HEPG2@0.657439,HMEC@0.014782,HSMM@0.023086,HUVEC@0.038453,K562@0.025408,MCF7@0.0869755,NHEK@0.00445533,NHLF@0.0197505,SKNSHRA@0.126875, 0 0 0 0 ENSG00000238005.1 ENST00000423175.1 chr1:235095410-235098935 3 551 2970 intergenic 2.53 1 0,0,1 0 0,0,0 30.7313974591652 47.7043771043771 151.19 19.5789473684211 41.3478114478114 172.889 22.529945553539 38.4868686868687 203.775 0 0 chimp,dog,elephant,horse,human,macaque,marmoset,orangutan,pig,rabbit, lincRNA lincRNA A549@0.591757,AG04450@0.127693,BJ@0.038794,GM12878@0.542639,H1HESC@0,HELAS3@0.175923,HEPG2@0.657439,HMEC@0.014782,HSMM@0.023086,HUVEC@0.038453,K562@0.025408,MCF7@0.0869755,NHEK@0.00445533,NHLF@0.0197505,SKNSHRA@0.126875, 0 0 0 0 ENSG00000238005.1 ENST00000451766.1 chr1:235095413-235105809 3 423 9969 intergenic 2.53 1 0,0,1 0 0,0,0 40.0307328605201 45.3529942822751 26.896 6.6903073286052 44.7527334737687 81.032 10.371158392435 49.3232019259705 112.822 0 0 chimp,cow,guinea_pig,human,macaque,marmoset,orangutan, lincRNA lincRNA A549@0.591757,AG04450@0.127693,BJ@0.038794,GM12878@0.542639,H1HESC@0,HELAS3@0.175923,HEPG2@0.657439,HMEC@0.014782,HSMM@0.023086,HUVEC@0.038453,K562@0.025408,MCF7@0.0869755,NHEK@0.00445533,NHLF@0.0197505,SKNSHRA@0.126875, 0 0 0 0 ENSG00000238005.1 ENST00000458044.1 chr1:235097123-235098873 2 357 1391 intergenic -2.14 1 0,1,0 0 0,0,0 0 13.7282530553559 151.19 0 2.76060388209921 178.583 0 6.38102084831057 211.802 0 0 chimp,human,macaque,orangutan, lincRNA lincRNA A549@0.591757,AG04450@0.127693,BJ@0.038794,GM12878@0.542639,H1HESC@0,HELAS3@0.175923,HEPG2@0.657439,HMEC@0.014782,HSMM@0.023086,HUVEC@0.038453,K562@0.025408,MCF7@0.0869755,NHEK@0.00445533,NHLF@0.0197505,SKNSHRA@0.126875, 0 0 0 0 ENSG00000232686.1 ENST00000357671.6 chr1:235333435-235334206 2 461 308 intronic -6.41 0 0,1,0 0 0,0,0 0 0 0 0 0 0 0 0 0 0 0 chimp,horse,human,marmoset,orangutan, sense_intronic sense_intronic A549@0.019519,AG04450@0.00821,BJ@0.0443375,GM12878@0.0785095,H1HESC@0.0418655,HELAS3@0.0589845,HEPG2@0.0818425,HMEC@0,HSMM@0,HUVEC@0.0645555,K562@0.151739,MCF7@0,NHEK@0.018616,NHLF@0,SKNSHRA@0.01906, 0 0 0 0 ENSG00000226135.1 ENST00000446945.1 chr1:235989882-235991238 2 750 604 intronic 0 0 0,0,0 0 0,0,0 0 0 0 0 0 3.346 0 0 10.248 0 0 cat,chimp,cow,dog,elephant,guinea_pig,human,macaque,marmoset,orangutan,panda,rabbit,rat, sense_intronic sense_intronic A549@0.128449,AG04450@0.089679,BJ@0.093391,GM12878@0.407218,H1HESC@0,HELAS3@0.09678,HEPG2@0.005035,HMEC@0.021841,HSMM@0.06591,HUVEC@0.0381285,K562@0.0171165,MCF7@0.0575355,NHEK@0.469529,NHLF@0.14745,SKNSHRA@0.082208, 0 0 0 0 ENSG00000229463.1 ENST00000412098.1 chr1:236002783-236003482 2 520 177 intronic -3.89 0 0,0,0 0 0,0,0 0 0 0 5.56346153846154 0 0 9.025 0 5.522 0 0 chimp,guinea_pig,human,macaque,orangutan, sense_intronic sense_intronic A549@0.003975,AG04450@0,BJ@0.0141745,GM12878@0.018257,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0.0075135,K562@0.0008585,MCF7@0.0014825,NHEK@0.0240303,NHLF@0.003061,SKNSHRA@0.0036865, 0 0 0 0 ENSG00000237845.1 ENST00000438371.1 chr1:236105853-236107105 2 738 512 intergenic 3.24 0 0,0,0 0 0,0,0 0 0 0 9.34552845528455 0 0 10.5650406504065 0 0 0 0 cat,chimp,cow,dog,human,macaque,marmoset,orangutan,panda,pig, lincRNA lincRNA A549@0.007465,AG04450@0.0160025,BJ@0.022978,GM12878@0.0054485,H1HESC@0,HELAS3@0.007173,HEPG2@0.029489,HMEC@0,HSMM@0,HUVEC@0.0505205,K562@0,MCF7@0,NHEK@0.262143,NHLF@0,SKNSHRA@0.190515, 0 0 0 0 ENSG00000229291.1 ENST00000443207.1 chr1:236121179-236135125 2 188 13756 intergenic -5.03 0 0,1,0 0 0,0,0 0 1.9470776388485 0 0 1.17977609770282 6.923 0 1.92105263157895 7.198 0 0 chimp,horse,human,macaque,orangutan, lincRNA lincRNA A549@0.063448,AG04450@0,BJ@0.076569,GM12878@0.0335565,H1HESC@0,HELAS3@0.0118925,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0.028109,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0.023924, 0 0 0 0 ENSG00000223776.4 ENST00000487567.1 chr1:236686369-236687808 1 1439 0 exonic 0.48 1 1,1,1 1 0,0,0 0 0 0 2.70743571924948 0 0 2.83530229325921 0 0 0 0 chimp,horse,human,macaque,marmoset,orangutan, antisense antisense A549@0.12994,AG04450@0.037981,BJ@0.027973,GM12878@0.117945,H1HESC@0.112996,HELAS3@0.230851,HEPG2@0.672813,HMEC@0.022748,HSMM@0.06654,HUVEC@0.118565,K562@0.071033,MCF7@0.111153,NHEK@0.04189,NHLF@0.0149335,SKNSHRA@0.0932965, 0 0 0 0 ENSG00000223776.4 ENST00000493812.2 chr1:236686371-236687800 1 1429 0 exonic 0.48 1 1,1,1 1 0,0,0 0 0 0 2.72638208537439 0 0 2.85514345696291 0 0 0 0 chimp,horse,human,macaque,marmoset,orangutan, antisense antisense A549@0.12994,AG04450@0.037981,BJ@0.027973,GM12878@0.117945,H1HESC@0.112996,HELAS3@0.230851,HEPG2@0.672813,HMEC@0.022748,HSMM@0.06654,HUVEC@0.118565,K562@0.071033,MCF7@0.111153,NHEK@0.04189,NHLF@0.0149335,SKNSHRA@0.0932965, 0 0 0 0 ENSG00000237250.3 ENST00000450451.1 chr1:238025475-238091621 12 3115 63009 exonic 73.33 1 0,1,1 0 0,0,0 0 3.70831151105398 0 28.9974317817014 4.86235299719088 0 222.586195826645 7.37472424574267 0 0 0 chimp,human, processed_transcript processed_transcript A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0.003149,HSMM@0,HUVEC@0,K562@0.0002805,MCF7@0,NHEK@0.091643,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000234464.1 ENST00000422844.1 chr1:238439337-238450316 2 195 10782 intergenic 0 0 0,0,0 0 0,0,0 34.974358974359 10.932851048043 0 0 0.354757929883139 0 11.2153846153846 0.36867000556483 0 0 0 cat,chimp,dog,horse,human,macaque,marmoset,orangutan, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0.448326,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000215808.2 ENST00000400946.2 chr1:238643684-238649323 2 1535 4102 intergenic -0.39 1 1,1,1 1 0,0,0 0 0 0 0 0 0 0 0 0 0 0 chimp,human,macaque,orangutan, lincRNA processed_transcript A549@0.491185,AG04450@0.025874,BJ@0.332318,GM12878@0.247141,H1HESC@0.642048,HELAS3@1.82475,HEPG2@0.275041,HMEC@0.912424,HSMM@0.008321,HUVEC@0,K562@0.006392,MCF7@0.021166,NHEK@0.668627,NHLF@0.072981,SKNSHRA@0.049179, 0 0 0 0 ENSG00000231877.1 ENST00000442726.1 chr1:238648745-238701605 4 2896 49958 intergenic -3.99 0 0,0,0 0 0,0,0 4.02624309392265 0.844889707354178 0 8.31664364640884 1.41446815324873 0 15.2966160220994 16.4981384362865 0 0 0 human,macaque,marmoset,panda, processed_transcript processed_transcript A549@0.001163,AG04450@0,BJ@0,GM12878@0.531187,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0.0007095,HUVEC@0,K562@0,MCF7@0,NHEK@0.000880333,NHLF@0,SKNSHRA@0.00235, 0 0 0 0 ENSG00000227185.1 ENST00000442410.1 chr1:239433025-239461237 2 446 27764 intergenic -20.12 0 0,0,1 0 0,0,0 0 1.77207895115978 0 0 4.23047831724535 0 0 3.97752485232675 0 0 0 chimp,human,macaque,marmoset,orangutan, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000233355.1 ENST00000427859.1 chr1:239867192-239882366 5 2426 12740 intronic 1.86 1 0,0,0 0 0,0,0 11.6772464962902 16.280612244898 188.912 18.1739488870569 16.0058869701727 127.729 20.4954657873042 22.9379905808477 154.452 0 0 chimp,human,macaque,marmoset,orangutan, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0.0027885,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000233355.1 ENST00000428176.1 chr1:239869622-239870822 2 787 411 intronic -2.03 0 0,0,0 0 0,0,0 0 0 86.982 0 0 104.058 0 184.031630170316 105.621 0 0 chimp,cow,dog,horse,human,macaque,marmoset,orangutan,pig,rabbit, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0.0027885,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000233355.1 ENST00000458325.1 chr1:239870424-239882419 3 947 11044 intronic -3.15 0 0,0,0 0 0,0,0 53.0876451953538 16.7937341542919 188.912 74.0359028511088 15.7397681999276 127.729 75.4107708553326 16.8727816008693 154.452 0 0 cat,chimp,cow,dog,elephant,guinea_pig,horse,human,macaque,marmoset,mouse,orangutan,panda,pig,rabbit,rat, lincRNA retained_intron A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0.0027885,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000234601.1 ENST00000444721.1 chr1:240061316-240063172 2 484 1370 intronic 2.99 0 0,0,0 0 0,0,0 84.9462809917355 0 0 24.551652892562 0 1.984 27.9028925619835 0 2.008 0 0 cat,chimp,guinea_pig,horse,human,macaque,marmoset,mouse,orangutan,panda,rabbit, antisense antisense A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000231979.1 ENST00000430542.1 chr1:240078739-240080255 2 441 1073 exonic -5.43 1 0,0,1 0 0,0,0 12.9954648526077 0 0 355.53514739229 0 0 5.50340136054422 0 0 0 0 chimp,cow,horse,human,macaque,marmoset,orangutan,rabbit, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000233735.1 ENST00000412311.1 chr1:240341139-240342944 3 494 1307 exonic 0.13 1 0,0,1 0 0,0,0 34.8562753036437 0 12.65 90.0587044534413 0 23.001 105.892712550607 0 28.001 0 0 chimp,cow,dog,guinea_pig,human,macaque,marmoset,orangutan,panda, antisense antisense A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000233735.1 ENST00000444308.1 chr1:240341139-240342944 2 336 1467 exonic 0 1 0,0,1 0 0,0,0 51.2470238095238 0 12.65 132.407738095238 0 23.001 155.6875 0 28.001 0 0 chimp,cow,dog,guinea_pig,horse,human,macaque,marmoset,opossum,orangutan,panda,pig, antisense antisense A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000233519.1 ENST00000455599.1 chr1:240563971-240564423 2 314 136 intronic -24.23 0 0,0,0 0 0,0,0 0 0 0 0 0 1.61 0 0 1.701 0 0 chimp,human,macaque,marmoset,orangutan, antisense antisense A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000224359.1 ENST00000457477.1 chr1:240693752-240694162 2 352 56 intronic -1.12 0 0,0,0 0 0,0,0 0 0 0 7.47159090909091 0 7.375 7.72727272727273 0 7.929 0 0 cat,chimp,dog,guinea_pig,horse,human,macaque,marmoset,orangutan,panda,rabbit, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000231440.1 ENST00000428891.1 chr1:240751822-240754048 2 673 1551 intronic 0 0 0,0,0 0 0,0,0 0 30.6505480335268 78.864 0 39.960025789813 29.543 0 42.2430689877498 30.108 0 0 chimp,human,macaque,marmoset,orangutan, sense_intronic sense_intronic A549@0,AG04450@0,BJ@0.0380585,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0.0041815, 0 0 0 0 ENSG00000230015.1 ENST00000431139.1 chr1:240902729-240906911 2 444 3736 intergenic -2.90 1 0,0,1 0 0,0,0 0 0 39.321 0 0 0 0 0 0 0 0 cat,chimp,elephant,human,macaque,orangutan,pig,rabbit, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0.0484545,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0.0046135,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0.02168,SKNSHRA@0.010192, 0 0 0 0 ENSG00000226919.1 ENST00000413801.1 chr1:240928857-240931980 2 570 2551 exonic -4.91 0 0,0,0 0 0,0,0 0 0 0 0 0 0 0 0 0 0 0 cat,chimp,cow,dog,elephant,guinea_pig,horse,human,macaque,marmoset,mouse,opossum,orangutan,panda,pig,rabbit, antisense antisense A549@0,AG04450@0,BJ@0.0419425,GM12878@0,H1HESC@0.0072535,HELAS3@0.00464,HEPG2@0.0314515,HMEC@0,HSMM@0,HUVEC@0.0923525,K562@0,MCF7@0.010624,NHEK@0,NHLF@0,SKNSHRA@0.01986, 0 0 0 0 ENSG00000225554.1 ENST00000444330.1 chr1:241587592-241596628 3 501 8531 intergenic -10.17 0 0,1,0 0 0,0,0 0 0 0 0 0 0 0 0 0 0 0 chimp,human,macaque,marmoset,orangutan, lincRNA lincRNA A549@0.0058395,AG04450@0.0949465,BJ@0.32202,GM12878@0,H1HESC@0.110506,HELAS3@0,HEPG2@0,HMEC@0.008124,HSMM@0.0394775,HUVEC@0.116342,K562@0,MCF7@0,NHEK@0,NHLF@0.881521,SKNSHRA@0.0232675, 0 0 0 0 ENSG00000225554.1 ENST00000413994.1 chr1:241587698-241596792 2 471 8621 intergenic 0 1 1,1,1 0 0,0,0 0 0 0 0 0 0 0 0 0 0 0 chimp,human,macaque,orangutan, lincRNA lincRNA A549@0.0058395,AG04450@0.0949465,BJ@0.32202,GM12878@0,H1HESC@0.110506,HELAS3@0,HEPG2@0,HMEC@0.008124,HSMM@0.0394775,HUVEC@0.116342,K562@0,MCF7@0,NHEK@0,NHLF@0.881521,SKNSHRA@0.0232675, 0 0 0 0 ENSG00000232689.1 ENST00000425514.1 chr1:242366857-242373825 3 459 6505 intronic -3.16 0 0,1,0 0 0,0,0 0 6.18847040737894 0 0 3.18508839354343 0 0 4.9967717140661 0 0 0 chimp,human, sense_intronic sense_intronic A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000224525.1 ENST00000421878.1 chr1:242372565-242374129 2 530 1032 intronic 0.56 0 0,0,0 0 0,0,0 0 0 0 0 0 6.595 0 0 8.793 0 0 chimp,human,orangutan, antisense antisense A549@0,AG04450@0.0111295,BJ@0,GM12878@0.0075785,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0.500283,HSMM@0.00857,HUVEC@0,K562@0,MCF7@0.003779,NHEK@0.0148897,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000234116.1 ENST00000427176.1 chr1:243169147-243170770 3 789 830 intergenic -1.18 1 0,1,0 0 0,0,0 0 10.3240963855422 0 0 0 0 0 4.68433734939759 0 0 0 chimp,dog,human,macaque,marmoset,orangutan,rabbit, lincRNA lincRNA A549@0.0042585,AG04450@0.0081425,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0.0206645,HMEC@0,HSMM@0,HUVEC@0,K562@0.057275,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000231512.1 ENST00000436756.1 chr1:243192814-243211127 3 621 17688 intergenic -29.54 0 0,0,0 0 0,0,0 0 0 0 0 3.45595884215287 0 106.26731078905 44.211895070104 85.848 0 0 chimp,human,macaque,marmoset,orangutan, lincRNA lincRNA A549@0.025842,AG04450@0.021314,BJ@0.0296615,GM12878@0.08382,H1HESC@0.017681,HELAS3@0.0331365,HEPG2@0.076003,HMEC@0.02134,HSMM@0.004332,HUVEC@0.0348935,K562@0.132263,MCF7@0.0333985,NHEK@0.045294,NHLF@0.004062,SKNSHRA@0.0470255, 1 96 0 0 ENSG00000231512.1 ENST00000420830.1 chr1:243194574-243211171 3 472 16121 intergenic 1.73 0 0,0,0 0 0,0,0 0 0 0 0 3.79188635940698 0 194.254237288136 47.3205136157807 60.152 0 0 chimp,cow,dog,elephant,horse,human,macaque,marmoset,orangutan,panda,pig,rabbit, lincRNA lincRNA A549@0.025842,AG04450@0.021314,BJ@0.0296615,GM12878@0.08382,H1HESC@0.017681,HELAS3@0.0331365,HEPG2@0.076003,HMEC@0.02134,HSMM@0.004332,HUVEC@0.0348935,K562@0.132263,MCF7@0.0333985,NHEK@0.045294,NHLF@0.004062,SKNSHRA@0.0470255, 0 0 0 0 ENSG00000231512.1 ENST00000450226.1 chr1:243202216-243211826 3 820 8786 intergenic 1.73 0 0,0,0 0 0,0,0 0 0 0 0 4.28397450489415 0 116.087804878049 84.1831322558616 0 0 0 chimp,cow,dog,guinea_pig,horse,human,macaque,marmoset,orangutan,panda,pig, lincRNA lincRNA A549@0.025842,AG04450@0.021314,BJ@0.0296615,GM12878@0.08382,H1HESC@0.017681,HELAS3@0.0331365,HEPG2@0.076003,HMEC@0.02134,HSMM@0.004332,HUVEC@0.0348935,K562@0.132263,MCF7@0.0333985,NHEK@0.045294,NHLF@0.004062,SKNSHRA@0.0470255, 5 7 2 7 ENSG00000231512.1 ENST00000437691.1 chr1:243211039-243215554 2 344 4169 intergenic 0 0 0,0,0 0 0,0,0 0 0 0 0 0 0 477.273255813953 297.020388582394 0 0 0 chimp,cow,horse,human,macaque,mouse,orangutan,pig,platypus, lincRNA lincRNA A549@0.025842,AG04450@0.021314,BJ@0.0296615,GM12878@0.08382,H1HESC@0.017681,HELAS3@0.0331365,HEPG2@0.076003,HMEC@0.02134,HSMM@0.004332,HUVEC@0.0348935,K562@0.132263,MCF7@0.0333985,NHEK@0.045294,NHLF@0.004062,SKNSHRA@0.0470255, 0 0 0 0 ENSG00000214837.3 ENST00000418377.1 chr1:243219131-243221165 3 1712 318 intergenic 4.78 0 0,0,0 0 0,0,0 0 0 0 0 0 0 321.904205607477 302.641509433962 13.275 0 0 cat,chimp,dog,human,macaque,marmoset,orangutan,rabbit, processed_transcript processed_transcript A549@1.72332,AG04450@0.840854,BJ@1.35413,GM12878@2.12373,H1HESC@3.2044,HELAS3@1.79877,HEPG2@2.9838,HMEC@0.629926,HSMM@0.742864,HUVEC@2.24801,K562@5.29806,MCF7@3.08718,NHEK@1.26209,NHLF@0.762463,SKNSHRA@2.89223, 32 3 19 3 ENSG00000214837.3 ENST00000435840.1 chr1:243219616-243265046 18 3816 41580 intergenic 1.68 0 0,1,0 1 0,0,0 0 0 0 0 0 0 92.3852201257861 10.958633958634 82.26 0 0 chimp,human,macaque,marmoset,orangutan, processed_transcript processed_transcript A549@1.72332,AG04450@0.840854,BJ@1.35413,GM12878@2.12373,H1HESC@3.2044,HELAS3@1.79877,HEPG2@2.9838,HMEC@0.629926,HSMM@0.742864,HUVEC@2.24801,K562@5.29806,MCF7@3.08718,NHEK@1.26209,NHLF@0.762463,SKNSHRA@2.89223, 0 0 0 0 ENSG00000214837.3 ENST00000399073.2 chr1:243220178-243221150 2 322 648 intergenic 0 0 0,0,0 0 0,0,0 0 0 0 0 0 0 212.055900621118 356.626543209877 8.85 0 0 cat,chimp,dog,horse,human,macaque,marmoset,orangutan, processed_transcript processed_transcript A549@1.72332,AG04450@0.840854,BJ@1.35413,GM12878@2.12373,H1HESC@3.2044,HELAS3@1.79877,HEPG2@2.9838,HMEC@0.629926,HSMM@0.742864,HUVEC@2.24801,K562@5.29806,MCF7@3.08718,NHEK@1.26209,NHLF@0.762463,SKNSHRA@2.89223, 0 0 0 0 ENSG00000214837.3 ENST00000434639.1 chr1:243220314-243220723 2 124 283 intergenic 0 0 0,0,0 0 0,0,0 0 0 0 0 0 0 418.040322580645 305.91519434629 127.518 0 0 chimp,human,macaque,marmoset,orangutan, processed_transcript processed_transcript A549@1.72332,AG04450@0.840854,BJ@1.35413,GM12878@2.12373,H1HESC@3.2044,HELAS3@1.79877,HEPG2@2.9838,HMEC@0.629926,HSMM@0.742864,HUVEC@2.24801,K562@5.29806,MCF7@3.08718,NHEK@1.26209,NHLF@0.762463,SKNSHRA@2.89223, 0 0 0 0 ENSG00000214837.3 ENST00000499986.3 chr1:243220495-243239968 9 925 18532 intergenic 2.64 0 0,0,0 0 0,0,0 0 0 0 0 0 0 56.04 24.5877401251889 0 1 1 chimp,human,macaque,marmoset,orangutan, processed_transcript processed_transcript A549@1.72332,AG04450@0.840854,BJ@1.35413,GM12878@2.12373,H1HESC@3.2044,HELAS3@1.79877,HEPG2@2.9838,HMEC@0.629926,HSMM@0.742864,HUVEC@2.24801,K562@5.29806,MCF7@3.08718,NHEK@1.26209,NHLF@0.762463,SKNSHRA@2.89223, 98 2 0 0 ENSG00000214837.3 ENST00000424800.1 chr1:243220533-243221149 2 522 92 intergenic 0.44 0 0,0,0 0 0,0,0 0 0 0 0 0 0 310.873563218391 61.0217391304348 8.555 0 0 chimp,human,macaque,marmoset,orangutan, processed_transcript processed_transcript A549@1.72332,AG04450@0.840854,BJ@1.35413,GM12878@2.12373,H1HESC@3.2044,HELAS3@1.79877,HEPG2@2.9838,HMEC@0.629926,HSMM@0.742864,HUVEC@2.24801,K562@5.29806,MCF7@3.08718,NHEK@1.26209,NHLF@0.762463,SKNSHRA@2.89223, 0 0 0 0 ENSG00000214837.3 ENST00000413762.1 chr1:243229478-243230172 2 122 570 intergenic 0 0 0,0,0 0 0,0,0 0 0 0 0 0 0 0 0 0 0 0 chimp,human,macaque,orangutan, processed_transcript processed_transcript A549@1.72332,AG04450@0.840854,BJ@1.35413,GM12878@2.12373,H1HESC@3.2044,HELAS3@1.79877,HEPG2@2.9838,HMEC@0.629926,HSMM@0.742864,HUVEC@2.24801,K562@5.29806,MCF7@3.08718,NHEK@1.26209,NHLF@0.762463,SKNSHRA@2.89223, 0 0 0 0 ENSG00000214837.3 ENST00000438255.1 chr1:243242159-243245427 2 430 2836 intergenic -2.98 0 0,1,0 0 0,0,0 0 0 0 0 0 0 0 0 0 0 0 cat,chimp,human,macaque,marmoset,orangutan, processed_transcript processed_transcript A549@1.72332,AG04450@0.840854,BJ@1.35413,GM12878@2.12373,H1HESC@3.2044,HELAS3@1.79877,HEPG2@2.9838,HMEC@0.629926,HSMM@0.742864,HUVEC@2.24801,K562@5.29806,MCF7@3.08718,NHEK@1.26209,NHLF@0.762463,SKNSHRA@2.89223, 0 0 0 0 ENSG00000214837.3 ENST00000427210.1 chr1:243242290-243254816 4 481 12039 intergenic -1.21 0 0,0,0 0 0,0,0 0 0 0 0 0 0 0 0 0 0 0 chimp,human,macaque,marmoset,orangutan, processed_transcript processed_transcript A549@1.72332,AG04450@0.840854,BJ@1.35413,GM12878@2.12373,H1HESC@3.2044,HELAS3@1.79877,HEPG2@2.9838,HMEC@0.629926,HSMM@0.742864,HUVEC@2.24801,K562@5.29806,MCF7@3.08718,NHEK@1.26209,NHLF@0.762463,SKNSHRA@2.89223, 0 0 0 0 ENSG00000214837.3 ENST00000433986.1 chr1:243251337-243255900 4 439 4118 intergenic -2.67 0 0,0,0 0 0,0,0 0 0 0 0 0 0 0 0 0 0 0 chimp,cow,dog,elephant,horse,human,macaque,marmoset,mouse,orangutan,rat, processed_transcript processed_transcript A549@1.72332,AG04450@0.840854,BJ@1.35413,GM12878@2.12373,H1HESC@3.2044,HELAS3@1.79877,HEPG2@2.9838,HMEC@0.629926,HSMM@0.742864,HUVEC@2.24801,K562@5.29806,MCF7@3.08718,NHEK@1.26209,NHLF@0.762463,SKNSHRA@2.89223, 0 0 0 0 ENSG00000214837.3 ENST00000417964.1 chr1:243251430-243265020 5 668 12914 intergenic 1.79 0 0,1,0 1 0,0,0 0 0 0 0 0 0 67.0449101796407 0 94.142 0 0 chimp,human,macaque,marmoset,orangutan, processed_transcript processed_transcript A549@1.72332,AG04450@0.840854,BJ@1.35413,GM12878@2.12373,H1HESC@3.2044,HELAS3@1.79877,HEPG2@2.9838,HMEC@0.629926,HSMM@0.742864,HUVEC@2.24801,K562@5.29806,MCF7@3.08718,NHEK@1.26209,NHLF@0.762463,SKNSHRA@2.89223, 0 0 0 0 ENSG00000214837.3 ENST00000415989.1 chr1:243254693-243255892 2 316 881 intergenic -2.67 0 0,0,0 0 0,0,0 0 0 0 0 0 0 0 0 0 0 0 chimp,elephant,human,macaque,marmoset,orangutan, processed_transcript processed_transcript A549@1.72332,AG04450@0.840854,BJ@1.35413,GM12878@2.12373,H1HESC@3.2044,HELAS3@1.79877,HEPG2@2.9838,HMEC@0.629926,HSMM@0.742864,HUVEC@2.24801,K562@5.29806,MCF7@3.08718,NHEK@1.26209,NHLF@0.762463,SKNSHRA@2.89223, 0 0 0 0 ENSG00000214837.3 ENST00000431528.1 chr1:243254768-243255860 3 362 726 intergenic -4.69 0 0,0,0 0 0,0,0 0 0 0 0 0 0 0 0 0 0 0 chimp,guinea_pig,human,macaque,marmoset,orangutan, processed_transcript processed_transcript A549@1.72332,AG04450@0.840854,BJ@1.35413,GM12878@2.12373,H1HESC@3.2044,HELAS3@1.79877,HEPG2@2.9838,HMEC@0.629926,HSMM@0.742864,HUVEC@2.24801,K562@5.29806,MCF7@3.08718,NHEK@1.26209,NHLF@0.762463,SKNSHRA@2.89223, 1 96 0 0 ENSG00000214837.3 ENST00000411733.1 chr1:243259293-243260889 2 528 1066 intergenic -7.01 0 0,0,0 0 0,0,0 0 0 0 0 0 0 0 0 0 0 0 cat,chimp,cow,elephant,horse,human,macaque,marmoset,orangutan,panda,pig, processed_transcript processed_transcript A549@1.72332,AG04450@0.840854,BJ@1.35413,GM12878@2.12373,H1HESC@3.2044,HELAS3@1.79877,HEPG2@2.9838,HMEC@0.629926,HSMM@0.742864,HUVEC@2.24801,K562@5.29806,MCF7@3.08718,NHEK@1.26209,NHLF@0.762463,SKNSHRA@2.89223, 0 0 0 0 ENSG00000214837.3 ENST00000435793.1 chr1:243260176-243265035 2 772 4085 intergenic 1.00 0 0,1,0 1 0,0,0 0 0 0 0 0 0 66.8924870466321 0 87.287 0 0 chimp,human,macaque,marmoset,orangutan, processed_transcript processed_transcript A549@1.72332,AG04450@0.840854,BJ@1.35413,GM12878@2.12373,H1HESC@3.2044,HELAS3@1.79877,HEPG2@2.9838,HMEC@0.629926,HSMM@0.742864,HUVEC@2.24801,K562@5.29806,MCF7@3.08718,NHEK@1.26209,NHLF@0.762463,SKNSHRA@2.89223, 0 0 0 0 ENSG00000227230.1 ENST00000439562.1 chr1:243299200-243303890 2 692 3996 exonic -12.80 0 0,0,1 0 0,0,0 291.85549132948 9.71621621621622 0 303.754335260116 16.234984984985 0 301.070809248555 19.7112112112112 0 0 0 cat,chimp,cow,dog,elephant,guinea_pig,horse,human,macaque,marmoset,mouse,opossum,orangutan,panda,pig,rabbit,rat, antisense antisense A549@0.0031275,AG04450@0.006787,BJ@0.006974,GM12878@0.0168395,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0.00190233,NHLF@0,SKNSHRA@0.003275, 0 0 0 0 ENSG00000232085.1 ENST00000437499.1 chr1:243327940-243332747 3 370 4433 exonic -12.56 1 0,0,1 0 0,0,0 53.6540540540541 230.309045792917 264.457 44.8756756756757 160.879539815024 195.765 60.4108108108108 149.415294383036 209.695 0 0 cat,chimp,dog,elephant,guinea_pig,horse,human,macaque,marmoset,mouse,orangutan,panda,rabbit, antisense antisense A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0.0096655,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000232085.1 ENST00000422938.1 chr1:243327974-243332689 2 275 4438 exonic 0 1 0,0,1 0 0,0,0 293.912727272727 210.878774222623 288.563 211.774545454545 146.744479495268 215.927 160.683636363636 139.251915277152 232.271 0 0 cat,chimp,cow,dog,guinea_pig,horse,human,macaque,marmoset,opossum,orangutan,pig,rabbit, antisense antisense A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0.0096655,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000236031.1 ENST00000439849.1 chr1:243708834-243711631 3 748 2045 exonic -2.79 1 0,0,0 0 0,0,0 76.3395721925134 0 10.275 56.7112299465241 0 17.11 65.9986631016043 0.847921760391198 16.55 0 0 chimp,cow,dog,elephant,guinea_pig,horse,human,macaque,marmoset,orangutan,panda,pig,rabbit, antisense antisense A549@0.0689845,AG04450@0,BJ@0,GM12878@0,H1HESC@0.019376,HELAS3@0.031121,HEPG2@0.01549,HMEC@0,HSMM@0,HUVEC@0,K562@0.00713,MCF7@0,NHEK@0,NHLF@0.0051675,SKNSHRA@0.0035815, 0 0 0 0 ENSG00000232184.1 ENST00000453572.1 chr1:243866159-243904123 3 386 37574 intronic 0 0 0,0,0 0 0,0,0 0 42.1095438335019 0 0 53.033453984138 0 0 54.592830148507 0 0 0 chimp,cow,dog,horse,human,macaque,marmoset,orangutan,pig,rat, processed_transcript processed_transcript A549@0,AG04450@0,BJ@0.018308,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000228939.1 ENST00000417120.1 chr1:243956507-243957702 2 515 678 intronic -3.20 0 0,0,0 0 0,0,0 0 0 0 0 0 0 0 0 1.944 0 0 chimp,human,macaque,marmoset,orangutan, sense_intronic sense_intronic A549@0.0653,AG04450@0.0680725,BJ@0.165961,GM12878@0,H1HESC@0.10272,HELAS3@0,HEPG2@0,HMEC@0.011588,HSMM@0,HUVEC@0.163583,K562@0,MCF7@0,NHEK@0.00498933,NHLF@0.0052725,SKNSHRA@0.160243, 0 0 0 0 ENSG00000226828.1 ENST00000440494.1 chr1:244080704-244210619 12 1787 128106 intergenic 3.33 1 0,1,1 0 0,0,0 56.1488528259653 34.3632304497838 0 58.7655288192501 35.1774077716891 2.39 63.9345271404589 38.1159274350928 2.448 0 0 chimp,human,macaque,marmoset,orangutan,rabbit, lincRNA processed_transcript A549@0,AG04450@0,BJ@0.0013685,GM12878@0,H1HESC@0.0058325,HELAS3@0.0088515,HEPG2@0,HMEC@0,HSMM@0.0011435,HUVEC@0.021121,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0.011922, 0 0 0 0 ENSG00000229960.1 ENST00000441338.1 chr1:244232122-244256328 5 463 23735 intergenic 4.80 0 0,1,0 0 0,0,0 0 23.5969243732884 0 0 13.0500947967137 5.896 0 15.9277017063408 6.535 0 0 chimp,human,macaque,marmoset,orangutan, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000237759.1 ENST00000440148.1 chr1:244270667-244272313 2 565 1079 intergenic 1.27 1 0,0,0 0 0,0,0 159.546902654867 118.913809082484 275.908 147.713274336283 130.278962001854 327.284 154.633628318584 149.79796107507 321.122 0 0 cat,chimp,cow,dog,elephant,guinea_pig,horse,human,macaque,marmoset,orangutan,panda,rabbit, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0.0145155,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0.01602, 0 0 0 0 ENSG00000188206.5 ENST00000366527.3 chr1:245003940-245010205 2 5005 1258 exonic -1.25 1 0,1,1 0 0,1,0 43.8767232767233 0 168.948 46.3102897102897 2.85373608903021 165.41 46.0263736263736 3.46025437201908 148.719 0 1 chimp,human,macaque,orangutan, processed_transcript retained_intron A549@2.89466,AG04450@1.71228,BJ@1.26342,GM12878@12.043,H1HESC@5.14077,HELAS3@14.4703,HEPG2@3.89952,HMEC@0.372806,HSMM@0.405683,HUVEC@1.35278,K562@19.675,MCF7@2.12874,NHEK@1.14597,NHLF@0.639525,SKNSHRA@1.94161, 0 0 0 0 ENSG00000232192.1 ENST00000446321.1 chr1:245369746-245397803 5 805 27244 intronic -0.21 1 0,0,0 0 0,0,0 0 10.0074878872412 20.83 0 15.1611363970048 5.901 0 17.3103068565556 9.026 0 0 chimp,cow,dog,guinea_pig,human,macaque,marmoset,mouse,orangutan,rabbit, antisense antisense A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0.003433, 0 0 0 0 ENSG00000238224.1 ENST00000418402.1 chr1:245778075-245778447 2 269 101 intronic 0 0 0,0,1 0 0,0,0 0 0 18.042 0 0 51.078 0 0 61.267 0 0 human,marmoset, antisense antisense A549@0,AG04450@0,BJ@0.0181695,GM12878@0.043247,H1HESC@0,HELAS3@0,HEPG2@0.0080285,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000231612.1 ENST00000414565.1 chr1:245837034-245839780 2 445 2299 intronic 1.69 0 0,0,1 0 0,0,0 25.2426966292135 0 6.692 6.20224719101124 0 0 12.8224719101124 2.24749891257068 0 0 0 chimp,cow,elephant,guinea_pig,horse,human,macaque,marmoset,orangutan,panda,pig, antisense antisense A549@0.0123585,AG04450@0.045382,BJ@0.0108275,GM12878@0.0748755,H1HESC@0.0121845,HELAS3@0,HEPG2@0.0619685,HMEC@0.036641,HSMM@0.0050995,HUVEC@0.0054395,K562@0.194198,MCF7@0.0091995,NHEK@0.00951633,NHLF@0.0172665,SKNSHRA@0.0722615, 0 0 0 0 ENSG00000235096.1 ENST00000426386.1 chr1:246196853-246198905 3 700 1348 intronic 5.62 0 0,0,0 0 0,0,0 0 0 0 46.4785714285714 0 0 42.3242857142857 1.48961424332344 0 0 0 cat,chimp,cow,elephant,guinea_pig,horse,human,macaque,marmoset,orangutan, antisense antisense A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0.0064545, 0 0 0 0 ENSG00000226876.1 ENST00000443763.1 chr1:246271928-246277168 4 577 4657 intronic 4.01 0 0,0,0 0 0,0,0 0 0 0 0 3.27464032639038 72.172 0 4.58449645694653 63.642 0 0 chimp,horse,human,macaque,marmoset,orangutan,panda,pig,rabbit, antisense antisense A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000226876.1 ENST00000451926.1 chr1:246274628-246277108 2 322 2156 intronic -3.77 0 0,0,0 0 0,0,0 0 0 0 0 0 0 0 0 0 0 0 chimp,elephant,human,macaque,marmoset,orangutan,pig, antisense antisense A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000230184.1 ENST00000426929.1 chr1:246484965-246485740 2 359 414 intronic -0.93 0 0,0,0 0 0,0,0 0 0 0 0 0 0 0 0 0 0 0 chimp,horse,human,macaque, sense_intronic sense_intronic A549@0.008765,AG04450@0.011278,BJ@0.008721,GM12878@0.049527,H1HESC@0,HELAS3@0.0075065,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0.0215645,K562@0.0268045,MCF7@0,NHEK@0.0126403,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000242042.1 ENST00000366308.2 chr1:246679341-246687589 3 961 7283 intergenic 5.35 1 0,0,1 0 0,0,0 0 0 0 0 0 0 182.891779396462 65.7746807634217 0 0 0 chimp,human,macaque,marmoset,orangutan, processed_transcript processed_transcript A549@0,AG04450@0,BJ@0.018203,GM12878@0.0041825,H1HESC@0,HELAS3@0.004688,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000225300.1 ENST00000417786.1 chr1:246769175-246771404 2 1958 269 intronic 1.32 0 0,0,1 0 0,0,0 0 0 0 0 0 0 0 0 0 0 0 chimp,human,macaque,marmoset,orangutan, sense_intronic sense_intronic A549@0.0921785,AG04450@0.189974,BJ@0.308771,GM12878@0.296636,H1HESC@0.10413,HELAS3@0.148705,HEPG2@0.166731,HMEC@0.001295,HSMM@0.0037235,HUVEC@0.344058,K562@1.2047,MCF7@0.07072,NHEK@0.0613687,NHLF@0.021063,SKNSHRA@0.165019, 0 0 0 0 ENSG00000235021.1 ENST00000442712.1 chr1:246853349-246855123 2 520 1252 intergenic -2.49 0 0,0,1 0 0,0,0 0 0 0 9.31730769230769 0 0 9.25961538461539 0 0 0 0 chimp,horse,human,macaque,marmoset,orangutan,rabbit, lincRNA lincRNA A549@0,AG04450@0.0085875,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0.013974,K562@0.004705,MCF7@0.0078775,NHEK@0,NHLF@0.011089,SKNSHRA@0, 0 0 0 0 ENSG00000227953.2 ENST00000421003.1 chr1:246939315-246955687 6 2594 13768 exonic 6.70 1 0,0,1 0 0,0,0 10.7540478026214 7.70031958163858 0 66.8974556669237 16.1967606042998 0 94.3812644564379 40.7855897733876 0 0 0 cat,chimp,dog,human,rabbit, antisense antisense A549@0.159277,AG04450@0.292226,BJ@0.336237,GM12878@0.124212,H1HESC@0.375974,HELAS3@0.213496,HEPG2@0.969979,HMEC@0.007418,HSMM@0.204466,HUVEC@0.471507,K562@0.118448,MCF7@0.103607,NHEK@0.00707333,NHLF@0.180197,SKNSHRA@0.553927, 0 0 0 0 ENSG00000227953.2 ENST00000505748.1 chr1:246939393-246952902 4 591 12912 exonic 0.57 0 0,0,1 0 0,0,0 47.2013536379019 8.21081164807931 0 164.976311336717 18.1555916976456 2.7 199.583756345178 45.1217472118959 5.706 0 0 cat,chimp,cow,dog,elephant,guinea_pig,horse,human,macaque,marmoset,mouse,orangutan,panda,pig,rabbit, antisense antisense A549@0.159277,AG04450@0.292226,BJ@0.336237,GM12878@0.124212,H1HESC@0.375974,HELAS3@0.213496,HEPG2@0.969979,HMEC@0.007418,HSMM@0.204466,HUVEC@0.471507,K562@0.118448,MCF7@0.103607,NHEK@0.00707333,NHLF@0.180197,SKNSHRA@0.553927, 0 0 0 0 ENSG00000227953.2 ENST00000509202.1 chr1:246939394-246944856 4 499 4957 exonic -0.64 0 0,0,1 0 0,0,0 12.7054108216433 16.3274157756708 0 122.995991983968 38.1466612870688 2.7 159.50501002004 44.6812588259028 6.035 0 0 cat,chimp,cow,dog,elephant,guinea_pig,horse,human,macaque,marmoset,mouse,orangutan,panda,pig,rabbit, antisense antisense A549@0.159277,AG04450@0.292226,BJ@0.336237,GM12878@0.124212,H1HESC@0.375974,HELAS3@0.213496,HEPG2@0.969979,HMEC@0.007418,HSMM@0.204466,HUVEC@0.471507,K562@0.118448,MCF7@0.103607,NHEK@0.00707333,NHLF@0.180197,SKNSHRA@0.553927, 0 0 0 0 ENSG00000227953.2 ENST00000426089.1 chr1:246952396-246955687 2 2543 746 exonic 6.70 1 1,1,1 0 0,0,0 0 0 0 22.2961069602831 11.3914209115282 0 36.8297286669288 14.2278820375335 4.374 0 0 chimp,human,orangutan, antisense antisense A549@0.159277,AG04450@0.292226,BJ@0.336237,GM12878@0.124212,H1HESC@0.375974,HELAS3@0.213496,HEPG2@0.969979,HMEC@0.007418,HSMM@0.204466,HUVEC@0.471507,K562@0.118448,MCF7@0.103607,NHEK@0.00707333,NHLF@0.180197,SKNSHRA@0.553927, 0 0 0 0 ENSG00000227953.2 ENST00000419361.1 chr1:246953926-246955687 2 550 1209 intergenic 6.70 1 0,0,1 0 0,0,0 0 0 0 67.4981818181818 0 21.765 105.730909090909 0 34.481 0 0 cat,chimp,dog,horse,human,macaque,marmoset,orangutan,pig,rabbit, antisense antisense A549@0.159277,AG04450@0.292226,BJ@0.336237,GM12878@0.124212,H1HESC@0.375974,HELAS3@0.213496,HEPG2@0.969979,HMEC@0.007418,HSMM@0.204466,HUVEC@0.471507,K562@0.118448,MCF7@0.103607,NHEK@0.00707333,NHLF@0.180197,SKNSHRA@0.553927, 0 0 0 0 ENSG00000232347.1 ENST00000428687.1 chr1:247373993-247405125 4 702 30424 intergenic -1.14 0 0,0,1 0 0,0,0 0 0 0 0 1.43232316592164 0 0 56.3245792795162 14.056 0 0 chimp,human,macaque,marmoset,orangutan, processed_transcript processed_transcript A549@0.173852,AG04450@0.0598275,BJ@0.402458,GM12878@0.0942435,H1HESC@0.0585125,HELAS3@0.0430555,HEPG2@0.115521,HMEC@0,HSMM@0.0193425,HUVEC@0.054582,K562@0.027576,MCF7@0.01491,NHEK@0.0574827,NHLF@0,SKNSHRA@0.0812195, 0 0 0 0 ENSG00000227135.1 ENST00000420469.1 chr1:247687981-247690054 2 1636 435 intronic 1.76 1 0,1,1 0 0,0,0 0 0 0 0 0 6.448 0 0 6.526 0 0 chimp,human,macaque,orangutan, antisense antisense A549@0,AG04450@0.0028755,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0.01963,MCF7@0,NHEK@0.000804333,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000236817.1 ENST00000435333.1 chr1:247728941-247804156 3 535 74676 exonic 0.63 1 0,1,1 0 0,0,0 0 6.38905404681558 0 0 3.46879854303926 8.68 0 6.30953720070706 10.336 0 0 cat,chimp,cow,dog,horse,human,macaque,marmoset,orangutan,panda,pig, antisense antisense A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000236817.1 ENST00000446347.1 chr1:247729210-247803505 3 478 73813 exonic 0.63 0 0,0,0 0 0,0,0 0 6.46375299743948 0 0 3.50935472071315 0 0 6.38330646363107 0 0 0 chimp,cow,horse,human,macaque,marmoset,orangutan,panda, antisense antisense A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000235749.1 ENST00000449298.1 chr1:247803051-247910364 2 1539 105772 encompassing 5.67 1 0,0,0 0 0,0,0 0 2.26631811821654 0 0 1.56894074046061 0 0 16.9901108043717 0 0 0 chimp,human,macaque,marmoset,orangutan, processed_transcript processed_transcript A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0.0192735,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0.0062605,SKNSHRA@0, 0 0 0 0 ENSG00000229255.1 ENST00000450847.1 chr1:248647546-248648785 2 965 272 intergenic -0.46 0 0,0,0 0 0,0,0 0 0 0 0 0 0 0 0 0 0 0 cat,chimp,cow,elephant,horse,human,orangutan,panda, antisense antisense A549@0.0028565,AG04450@0.0033345,BJ@0,GM12878@14.4324,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0.0040135,SKNSHRA@0, 0 0 0 0 ENSG00000224521.1 ENST00000438623.1 chr1:248712057-248726764 2 953 13752 encompassing 0.92 1 0,0,1 0 0,0,0 0 0 0 0 13.0863147178592 0 0 10.1141652123327 0 0 0 cat,chimp,cow,dog,elephant,horse,human,marmoset,orangutan,panda,pig, antisense antisense A549@0.0128475,AG04450@0,BJ@0,GM12878@2.46413,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000224521.1 ENST00000436515.1 chr1:248725901-248727140 2 965 272 intergenic -0.46 0 0,0,0 0 0,0,0 0 0 0 0 0 0 0 0 0 0 0 cat,chimp,cow,dog,elephant,horse,human,orangutan,panda, antisense antisense A549@0.0128475,AG04450@0,BJ@0,GM12878@2.46413,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000229703.1 ENST00000437830.1 chr1:248855492-248862411 4 576 6337 intergenic -2.26 1 0,0,1 0 0,0,0 0 0 0 154.758680555556 1.14123402240808 2.893 174.230902777778 1.8611330282468 3.773 0 0 cat,chimp,cow,dog,elephant,guinea_pig,human,macaque,marmoset,mouse,orangutan,panda,pig,rabbit,rat, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0.058359,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000232694.2 ENST00000436484.1 chr1:248881947-248885506 2 1096 2461 intergenic -2.02 0 0,0,1 0 0,0,0 0 0 0 71.7819343065693 0 0 127.354927007299 0 407.661 0 0 cat,chimp,cow,dog,elephant,horse,human,macaque,marmoset,orangutan,panda,pig,rabbit, processed_transcript processed_transcript A549@0.235048,AG04450@0,BJ@0,GM12878@0.011525,H1HESC@0,HELAS3@0.0258695,HEPG2@0.0263215,HMEC@0.003729,HSMM@0,HUVEC@0,K562@0.213518,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@1.5588, 0 0 0 0 ENSG00000227237.1 ENST00000417047.1 chr1:249153363-249158995 3 459 5169 intergenic 0.80 1 0,0,1 0 0,0,0 0 5.77964790094796 49.589 5.23093681917211 0.641323273360418 100.187 5.18518518518519 4.70052234474753 100.362 0 0 chimp,human,macaque,orangutan, antisense antisense A549@0.022675,AG04450@0.013959,BJ@0.005329,GM12878@0.005748,H1HESC@0.0288,HELAS3@0.176737,HEPG2@0.0177125,HMEC@0.008863,HSMM@0,HUVEC@0,K562@0.0721755,MCF7@0.399042,NHEK@0.00499033,NHLF@0,SKNSHRA@0.0273045, 0 0 0 0 ENSG00000224285.1 ENST00000449585.1 chr10:60001-60544 2 345 196 intergenic 0 0 0,0,0 0 0,0,0 0 0 0 0 0 0 0 0 0 0 0 chimp,human,marmoset,orangutan, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0.005794,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000233021.2 ENST00000425723.2 chr10:483501-487110 2 556 3051 exonic -1.04 0 0,0,0 0 0,0,0 0 0 0 26.8646209386282 16.5361939076318 0 213.436823104693 20.9256469046839 0 0 0 chimp,dog,human,macaque,marmoset,orangutan,rabbit, antisense antisense A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0.003603,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000225140.1 ENST00000451601.1 chr10:674578-677195 2 1655 960 intronic -0.45 0 0,0,0 0 0,0,0 0 0 0 17.7516616314199 0 0 28.1317220543807 0 0 0 0 chimp,human,macaque,marmoset,orangutan, antisense antisense A549@0,AG04450@0,BJ@0.001486,GM12878@0,H1HESC@0.002504,HELAS3@0,HEPG2@0.0157545,HMEC@0,HSMM@0.019868,HUVEC@0,K562@0.0028025,MCF7@0,NHEK@0,NHLF@0.004658,SKNSHRA@0.0033565, 0 0 0 0 ENSG00000231601.1 ENST00000412695.1 chr10:789932-790898 2 422 542 intergenic 3.81 0 0,0,0 0 0,0,0 0 0 0 0 0 0 0 0 0 0 0 NA lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000229869.1 ENST00000435531.1 chr10:978966-988683 3 404 9309 intergenic 4.12 0 0,0,0 0 0,0,0 0 0 0 0 0 0 0 0 0 0 0 chimp,human,macaque,orangutan, antisense antisense A549@0.0422195,AG04450@0.005507,BJ@0,GM12878@0.004953,H1HESC@0.0289045,HELAS3@0.016655,HEPG2@0,HMEC@0,HSMM@0.0050555,HUVEC@0.006561,K562@0.0228195,MCF7@0.0595015,NHEK@0.00313633,NHLF@0,SKNSHRA@0.0055745, 0 0 0 0 ENSG00000232656.3 ENST00000536039.1 chr10:1068606-1090129 7 871 20640 exonic -0.52 1 1,1,1 0 0,0,0 45.0183696900115 5.64932170542636 0 70.4477611940299 10.1815406976744 0 131.061997703789 15.3888565891473 0 0 0 chimp,human,macaque,marmoset,orangutan,rabbit, antisense antisense A549@0.16543,AG04450@0.0483165,BJ@0.0919575,GM12878@0.371984,H1HESC@0.116824,HELAS3@0.352923,HEPG2@0.125614,HMEC@0.022926,HSMM@0.018177,HUVEC@0.0170035,K562@0.494923,MCF7@0.137325,NHEK@0.273357,NHLF@0.0065675,SKNSHRA@0.0529645, 0 0 0 0 ENSG00000232656.3 ENST00000437374.1 chr10:1068606-1090138 3 890 20638 exonic 0.92 1 1,1,1 0 0,0,0 44.0573033707865 5.64986917336951 0 68.9438202247191 10.1825273766838 0 128.26404494382 15.3903479019285 0 0 0 chimp,human,macaque,marmoset,orangutan,rabbit, antisense antisense A549@0.16543,AG04450@0.0483165,BJ@0.0919575,GM12878@0.371984,H1HESC@0.116824,HELAS3@0.352923,HEPG2@0.125614,HMEC@0.022926,HSMM@0.018177,HUVEC@0.0170035,K562@0.494923,MCF7@0.137325,NHEK@0.273357,NHLF@0.0065675,SKNSHRA@0.0529645, 0 0 0 0 ENSG00000232656.3 ENST00000420381.1 chr10:1068608-1089623 5 667 20340 exonic -3.73 0 0,1,1 0 0,0,0 0 5.73264503441495 0 3.1544227886057 10.3317109144543 0 43.784107946027 15.6158308751229 0 0 0 chimp,human,macaque,marmoset,orangutan,rabbit, antisense antisense A549@0.16543,AG04450@0.0483165,BJ@0.0919575,GM12878@0.371984,H1HESC@0.116824,HELAS3@0.352923,HEPG2@0.125614,HMEC@0.022926,HSMM@0.018177,HUVEC@0.0170035,K562@0.494923,MCF7@0.137325,NHEK@0.273357,NHLF@0.0065675,SKNSHRA@0.0529645, 0 0 0 0 ENSG00000232656.3 ENST00000428780.2 chr10:1068608-1090138 4 1050 20474 exonic 0.92 1 1,1,1 0 0,0,0 37.3438095238095 5.69512552505617 0 58.4380952380952 10.2640910422975 0 108.719047619048 15.5136270391716 0 0 0 chimp,human,marmoset,orangutan,rabbit, antisense antisense A549@0.16543,AG04450@0.0483165,BJ@0.0919575,GM12878@0.371984,H1HESC@0.116824,HELAS3@0.352923,HEPG2@0.125614,HMEC@0.022926,HSMM@0.018177,HUVEC@0.0170035,K562@0.494923,MCF7@0.137325,NHEK@0.273357,NHLF@0.0065675,SKNSHRA@0.0529645, 0 0 0 0 ENSG00000232656.3 ENST00000434470.1 chr10:1068614-1081861 3 432 12811 exonic -0.90 0 0,0,0 0 0,0,0 0 0 0 4.87037037037037 0 0 67.6018518518518 2.61782842869409 0 0 0 chimp,human,marmoset,orangutan,rat, antisense antisense A549@0.16543,AG04450@0.0483165,BJ@0.0919575,GM12878@0.371984,H1HESC@0.116824,HELAS3@0.352923,HEPG2@0.125614,HMEC@0.022926,HSMM@0.018177,HUVEC@0.0170035,K562@0.494923,MCF7@0.137325,NHEK@0.273357,NHLF@0.0065675,SKNSHRA@0.0529645, 0 0 0 0 ENSG00000229205.1 ENST00000425630.1 chr10:1205708-1210612 3 2431 2469 intergenic 2.12 0 0,1,1 1 0,0,0 0 0 0 0 4.32361279870393 0 0 11.9866342648846 0 0 0 chimp,human,macaque,orangutan, lincRNA non_coding A549@0,AG04450@0.005299,BJ@0.008258,GM12878@0.0035825,H1HESC@0,HELAS3@0.075456,HEPG2@0.028017,HMEC@0,HSMM@0,HUVEC@0.264777,K562@12.8524,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0.0018675, 0 0 0 0 ENSG00000233052.1 ENST00000432987.1 chr10:1403196-1403832 2 357 277 intronic 0 0 0,0,1 0 0,0,0 0 0 53.573 0 0 21.54 0 0 25.309 0 0 chimp,human,macaque,marmoset,orangutan, sense_intronic sense_intronic A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000205696.4 ENST00000421697.2 chr10:1568832-1599179 2 635 29710 intronic 3.67 1 0,0,0 0 0,0,0 0 2.62840794345338 0 0 20.2097273645237 0 0 45.5569841804106 0 0 1 chimp,human,orangutan, antisense non_coding A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0.0428055,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0.003156,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000205696.4 ENST00000381301.3 chr10:1568958-1577868 3 622 8284 intronic 0.68 0 0,0,0 0 0,0,0 0 1.6733462095606 0 10.6704180064309 18.7961129888943 0 62.8327974276527 34.1533075808788 0 0 0 chimp,human,macaque, antisense non_coding A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0.0428055,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0.003156,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000234962.1 ENST00000413603.1 chr10:2047667-2056542 3 2094 6777 intergenic 2.03 0 0,0,1 0 0,0,0 0 6.59539619300575 0 0 5.75402095322414 0 7.59073543457498 8.28168806256456 0 0 0 human,macaque, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0.0012655,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0.0016665,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000234962.1 ENST00000438372.1 chr10:2054459-2056542 3 774 1305 intergenic 1.50 0 0,0,0 0 0,0,0 0 0 0 0 0 0 0 0 0 0 0 chimp,human,macaque,orangutan, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0.0012655,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0.0016665,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000234962.1 ENST00000454424.1 chr10:2054847-2055605 2 482 274 intergenic 0 0 0,0,0 0 0,0,0 0 0 0 0 0 0 0 0 0 0 0 chimp,human,macaque,orangutan, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0.0012655,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0.0016665,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000226694.1 ENST00000435539.1 chr10:2114039-2123291 2 430 8820 intergenic 2.14 0 0,0,0 0 0,0,0 0 0.710884353741497 0 0 10.6792517006803 0 0 12.9455782312925 0 0 0 chimp,human,macaque,marmoset,orangutan, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0.027298,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000226694.1 ENST00000450757.1 chr10:2114124-2114923 3 427 368 intergenic -3.74 0 0,0,0 0 0,0,0 0 0 0 0 0 0 0 21.7907608695652 0 0 0 chimp,human,macaque,marmoset,orangutan, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0.027298,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000227912.1 ENST00000421077.1 chr10:2208526-2211654 2 2319 807 intergenic 5.18 0 0,1,0 0 0,0,0 18.3117723156533 0 0 30.2871927554981 6.25278810408922 4.302 33.6951272100043 8.3816604708798 8.172 0 0 chimp,human,macaque,orangutan, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0.0021325,HELAS3@0.129991,HEPG2@0.014103,HMEC@0.014113,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0.0236513,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000231326.1 ENST00000418524.1 chr10:2211334-2218626 3 295 6993 intergenic -1.39 0 0,0,0 0 0,0,0 0 14.013871013871 0 0 29.3379093379093 3.825 0 35.2569712569713 3.975 0 0 chimp,human,macaque,marmoset,orangutan, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000231326.1 ENST00000436003.1 chr10:2211350-2218626 2 185 7089 intergenic 0 0 0,0,0 0 0,0,0 0 13.8240936662435 0 0 28.9406122161095 3.825 0 34.7795175624207 3.975 0 0 chimp,human,macaque,marmoset,orangutan, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000234556.1 ENST00000418295.1 chr10:2347277-2357269 3 739 9249 intergenic -1.47 0 0,1,0 0 0,0,0 22.5060893098782 18.8546869931885 0 6.27198917456022 22.5283814466429 1.984 6.3531799729364 23.7095902259704 2.008 0 0 chimp,human,macaque,marmoset,orangutan, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000234170.1 ENST00000414107.1 chr10:2488447-2489546 2 754 343 intergenic -9.10 0 0,0,0 0 0,0,0 0 0 0 0 0 0 0 0 0 0 0 chimp,guinea_pig,horse,human,marmoset,orangutan, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0.006478,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000234170.1 ENST00000441907.1 chr10:2488447-2489546 2 762 335 intergenic -2.77 0 0,0,0 0 0,0,0 0 0 0 0 0 0 0 0 0 0 0 chimp,guinea_pig,horse,human,marmoset,orangutan, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0.006478,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000234170.1 ENST00000439973.1 chr10:2488452-2489546 2 712 380 intergenic -9.10 0 0,0,0 0 0,0,0 0 0 0 0 0 0 0 0 0 0 0 chimp,guinea_pig,horse,human,marmoset,orangutan, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0.006478,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000237500.1 ENST00000431209.1 chr10:2541913-2542762 2 330 517 intergenic -0.14 0 0,0,0 0 0,0,0 0 0 0 0 0 0 0 0 4.695 0 0 chimp,human,macaque,marmoset,orangutan, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000235281.1 ENST00000438753.1 chr10:2543975-2609431 2 916 64538 intergenic 3.25 0 0,0,0 0 0,0,0 0 7.38261179460163 0 34.1189956331878 9.70965942545477 7.641 43.2936681222707 16.9498589977997 47.335 0 0 cat,chimp,cow,human,macaque,marmoset,orangutan,rat, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0.108292,HEPG2@0.0326855,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000235281.1 ENST00000437289.1 chr10:2543995-2579817 2 318 35502 intergenic -0.72 0 0,0,0 0 0,0,0 0 9.97391696242465 0 0 13.6870598839502 7.641 8.17924528301887 24.3156441890598 53.115 0 0 human,macaque,orangutan, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0.108292,HEPG2@0.0326855,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000225430.1 ENST00000446337.1 chr10:3026556-3027331 2 413 360 intergenic 0 0 0,0,0 0 0,0,0 0 0 0 19.2227602905569 0 14.464 20.8716707021792 0 16.209 0 0 chimp,human,macaque,marmoset,orangutan,panda, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0.00938867,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000234182.1 ENST00000439575.1 chr10:3052723-3055303 3 605 1971 intergenic -8.97 1 0,0,0 0 0,0,0 0 0 0 0 0 0 4.97851239669421 0 1.944 0 0 human,macaque,orangutan,rabbit, lincRNA lincRNA A549@0,AG04450@0,BJ@0.010645,GM12878@0,H1HESC@0,HELAS3@0.004365,HEPG2@0.0096375,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000237399.1 ENST00000441377.1 chr10:3183864-3187425 4 605 2950 exonic 5.76 0 0,1,0 0 0,0,0 0 0 0 0 9.77830508474576 28.421 0 16.9925423728814 46.488 0 0 chimp,human,macaque,marmoset,orangutan, antisense antisense A549@0.221846,AG04450@0.187381,BJ@0.0820145,GM12878@0.246415,H1HESC@0.087085,HELAS3@0.0698855,HEPG2@0.01943,HMEC@0.032772,HSMM@0.0356275,HUVEC@0.255072,K562@0.046416,MCF7@0.120736,NHEK@0.126313,NHLF@0.0607285,SKNSHRA@0.321047, 0 0 0 0 ENSG00000237399.1 ENST00000452662.1 chr10:3185207-3204580 4 449 18918 intronic 6.41 0 0,0,0 0 0,0,0 0 3.93593403108151 0 0 17.9088169996828 0 0 33.0799238820171 0 0 0 chimp,human,macaque,marmoset,orangutan, antisense antisense A549@0.221846,AG04450@0.187381,BJ@0.0820145,GM12878@0.246415,H1HESC@0.087085,HELAS3@0.0698855,HEPG2@0.01943,HMEC@0.032772,HSMM@0.0356275,HUVEC@0.255072,K562@0.046416,MCF7@0.120736,NHEK@0.126313,NHLF@0.0607285,SKNSHRA@0.321047, 0 0 0 0 ENSG00000237399.1 ENST00000430356.1 chr10:3185241-3189240 3 2246 1749 exonic 5.76 0 0,0,0 0 0,0,0 0 0 0 3.41674087266251 16.4928530588908 0 12.166518254675 28.6609491137793 0 0 0 chimp,human,macaque,orangutan, antisense antisense A549@0.221846,AG04450@0.187381,BJ@0.0820145,GM12878@0.246415,H1HESC@0.087085,HELAS3@0.0698855,HEPG2@0.01943,HMEC@0.032772,HSMM@0.0356275,HUVEC@0.255072,K562@0.046416,MCF7@0.120736,NHEK@0.126313,NHLF@0.0607285,SKNSHRA@0.321047, 0 0 0 0 ENSG00000227575.1 ENST00000421821.1 chr10:3247908-3248816 2 463 443 intergenic 1.10 0 0,1,0 0 0,0,0 0 0 0 0 0 0 0 0 0 0 0 chimp,dog,horse,human,macaque,marmoset,orangutan,panda, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000236968.1 ENST00000445932.1 chr10:3266008-3269599 3 594 2993 intergenic -3.61 0 0,1,1 0 0,0,0 0 0 0 0 0 0 0 0 0 0 0 chimp,elephant,guinea_pig,horse,human,macaque,marmoset,rabbit,rat, lincRNA lincRNA A549@0,AG04450@0,BJ@0.008107,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0.00427667,NHLF@0.0194645,SKNSHRA@0, 0 0 0 0 ENSG00000226762.1 ENST00000417149.1 chr10:3282563-3299402 4 386 16447 intergenic 3.12 0 0,1,1 0 0,0,0 0 0 0 0 2.35386392655195 0 4.26165803108808 6.71934091323646 0 0 0 chimp,human,macaque,orangutan, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0.0358465,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000227338.1 ENST00000436340.1 chr10:3308195-3309207 2 461 549 intergenic 3.30 0 0,0,1 0 0,0,0 0 0 0 0 0 0 0 0 0 0 0 chimp,human,macaque,marmoset, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0.010689,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0.100408,K562@0,MCF7@0.0265205,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000233321.1 ENST00000413993.1 chr10:3529086-3545030 5 827 15109 intergenic 1.79 0 0,0,0 0 0,0,0 0 0 23.644 2.60096735187424 3.94936792640148 81.272 2.64449818621524 4.44145873320537 128.459 0 0 chimp,human,macaque,marmoset,orangutan, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0.0059485,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0.0343785,NHEK@0,NHLF@0,SKNSHRA@0.0066845, 0 0 0 0 ENSG00000236892.1 ENST00000426811.1 chr10:3574286-3579223 2 428 4507 intergenic -6.78 0 0,0,0 0 0,0,0 0 0 30.74 0 1.08076325715554 2.89 8.35981308411215 8.3738628799645 2.95 0 0 chimp,elephant,guinea_pig,horse,human,macaque,marmoset,orangutan,rabbit, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000236892.1 ENST00000413757.1 chr10:3577304-3579049 2 370 1373 intergenic -2.34 0 0,0,0 0 0,0,0 0 0 30.74 0 0 2.89 0 0 2.95 0 0 chimp,human,marmoset,orangutan, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000229672.1 ENST00000421629.1 chr10:3793259-3805418 6 752 11397 intergenic 0.47 0 0,0,0 0 0,0,0 0 0 0 0 4.25664648591735 7.6 0 7.47047468632096 15.405 0 0 chimp,human,macaque,marmoset,orangutan, antisense antisense A549@0,AG04450@0,BJ@0,GM12878@0.007361,H1HESC@0,HELAS3@0,HEPG2@0.0056215,HMEC@0.010804,HSMM@0,HUVEC@0.0117785,K562@0.13643,MCF7@0,NHEK@0.0223613,NHLF@0,SKNSHRA@0.0286305, 0 0 0 0 ENSG00000228353.1 ENST00000415358.1 chr10:3810107-3810943 2 311 523 intergenic 6.57 0 0,0,1 0 0,0,0 0 0 0 0 0 0 0 0 0 0 0 chimp,human,macaque,marmoset,orangutan, antisense antisense A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0.033817,MCF7@0,NHEK@0.0573617,NHLF@0,SKNSHRA@0.0266525, 0 0 0 0 ENSG00000230573.1 ENST00000413339.1 chr10:3876142-3876920 2 534 242 intergenic -0.62 0 0,0,0 0 0,0,0 0 0 0 0 0 0 0 0 2.673 0 0 chimp,human,macaque,marmoset,orangutan,rabbit, lincRNA lincRNA A549@0,AG04450@0,BJ@0.0060375,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0.008506,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0.008466, 0 0 0 0 ENSG00000226005.1 ENST00000450152.1 chr10:3974896-3978004 2 401 2705 intergenic 5.75 0 1,1,1 0 0,0,0 0 16.6181146025878 0 0 12.6706099815157 16.453 0 14.2573012939002 17.999 0 0 chimp,human,macaque,marmoset,orangutan, lincRNA lincRNA A549@0,AG04450@0.0288875,BJ@0,GM12878@0,H1HESC@0.004194,HELAS3@0,HEPG2@0,HMEC@0.101818,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@2.22171,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000226005.1 ENST00000432452.1 chr10:3976711-3978004 2 588 703 intergenic -11.92 0 0,0,1 0 0,0,0 0 63.9431009957326 0 0 44.5718349928876 0 0 50.5917496443812 0 0 0 chimp,human,macaque,marmoset,orangutan, lincRNA lincRNA A549@0,AG04450@0.0288875,BJ@0,GM12878@0,H1HESC@0.004194,HELAS3@0,HEPG2@0,HMEC@0.101818,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@2.22171,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000227101.1 ENST00000455525.1 chr10:4067132-4070586 2 631 2821 intergenic 6.13 1 0,0,0 0 0,0,0 0 0 0 0 2.2339595887983 36.859 0 4.94292803970223 38.18 0 0 chimp,human,macaque,marmoset,orangutan, lincRNA lincRNA A549@0,AG04450@0.0072615,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000236990.1 ENST00000455199.1 chr10:4093918-4131205 4 2283 34998 intergenic 0.88 0 0,0,1 0 0,0,0 0 0.806131778958798 0 0 3.67775301445797 0 0 4.44093948225613 0 0 0 chimp,human,macaque,orangutan, lincRNA lincRNA A549@0,AG04450@0.0247245,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0.0134585,HUVEC@0.011108,K562@0.0023415,MCF7@0.0245475,NHEK@0.002309,NHLF@0.00929,SKNSHRA@0.0133835, 0 0 0 0 ENSG00000233117.1 ENST00000454470.1 chr10:4277752-4285835 2 361 7720 intergenic -0.31 0 0,1,0 0 0,0,0 0 2.63147668393782 87.553 0 10.0963730569948 99.952 7.70083102493075 15.5 84.8 0 0 chimp,horse,human,macaque,marmoset,orangutan,panda,rabbit, lincRNA lincRNA A549@0,AG04450@0.010306,BJ@0.063272,GM12878@0,H1HESC@0,HELAS3@0.0101325,HEPG2@0,HMEC@0.064265,HSMM@0.221092,HUVEC@0.02539,K562@0,MCF7@0,NHEK@0.0496807,NHLF@0.11655,SKNSHRA@0.15764, 0 0 0 0 ENSG00000233117.1 ENST00000418372.1 chr10:4285142-4285981 2 444 393 intergenic -0.31 0 1,1,1 0 0,0,0 18.6486486486486 0 78.913 10.9324324324324 0 96.644 13.4684684684685 0 80.94 0 0 cat,chimp,cow,dog,horse,human,macaque,marmoset,orangutan,panda, lincRNA lincRNA A549@0,AG04450@0.010306,BJ@0.063272,GM12878@0,H1HESC@0,HELAS3@0.0101325,HEPG2@0,HMEC@0.064265,HSMM@0.221092,HUVEC@0.02539,K562@0,MCF7@0,NHEK@0.0496807,NHLF@0.11655,SKNSHRA@0.15764, 0 0 0 0 ENSG00000224382.1 ENST00000454152.1 chr10:4426438-4452804 2 2388 23976 intergenic 2.26 0 0,1,0 0 0,0,0 0 2.12462462462462 67.034 13.6817420435511 9.32107107107107 99.243 20.3827470686767 11.8483900567234 144.51 0 0 chimp,human,marmoset,orangutan,rabbit, lincRNA lincRNA A549@0,AG04450@0.004927,BJ@0.00103,GM12878@0,H1HESC@0,HELAS3@0.005157,HEPG2@0,HMEC@0,HSMM@0.0042755,HUVEC@0.0024905,K562@0,MCF7@0,NHEK@0,NHLF@0.0040635,SKNSHRA@0.0019005, 0 0 0 0 ENSG00000224382.1 ENST00000434902.1 chr10:4448694-4451443 2 867 1880 intergenic 3.77 0 0,1,0 0 0,0,0 0 9.84255319148936 0 0 55.6031914893617 5.736 0 58.3329787234043 6.248 0 0 chimp,horse,human,macaque,marmoset,orangutan,rabbit, lincRNA lincRNA A549@0,AG04450@0.004927,BJ@0.00103,GM12878@0,H1HESC@0,HELAS3@0.005157,HEPG2@0,HMEC@0,HSMM@0.0042755,HUVEC@0.0024905,K562@0,MCF7@0,NHEK@0,NHLF@0.0040635,SKNSHRA@0.0019005, 0 0 0 0 ENSG00000230096.1 ENST00000420082.1 chr10:4457497-4468371 4 687 10181 intergenic 0.97 0 0,0,0 0 0,0,0 0 0 0 0 3.16275414988704 0 0 3.57705529908653 0 0 0 chimp,human,macaque,marmoset,orangutan, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0.0080485, 0 0 0 0 ENSG00000231298.1 ENST00000430998.1 chr10:4693009-4720346 4 842 26489 intergenic 1.09 0 1,1,1 0 0,0,0 0 3.9519800671977 0 0 3.13930310695005 0 2.76840855106888 4.4142096719393 0 0 0 chimp,human,macaque,marmoset,orangutan,rabbit, lincRNA processed_transcript A549@0.237368,AG04450@0.0127195,BJ@0.02134,GM12878@0.0028675,H1HESC@0,HELAS3@0.0570355,HEPG2@0.14233,HMEC@4.42744,HSMM@0.303409,HUVEC@6.08433,K562@0,MCF7@0.0492235,NHEK@7.17015,NHLF@0.034899,SKNSHRA@0.022423, 0 0 0 0 ENSG00000231298.1 ENST00000443994.1 chr10:4693295-4698992 3 415 5278 intergenic -8.98 0 0,1,1 0 0,0,0 0 2.72527472527473 0 14.0506024096386 6.06252368321334 0 20.4048192771084 8.89200454717696 0 0 0 chimp,elephant,horse,human,macaque,marmoset,orangutan,panda, lincRNA processed_transcript A549@0.237368,AG04450@0.0127195,BJ@0.02134,GM12878@0.0028675,H1HESC@0,HELAS3@0.0570355,HEPG2@0.14233,HMEC@4.42744,HSMM@0.303409,HUVEC@6.08433,K562@0,MCF7@0.0492235,NHEK@7.17015,NHLF@0.034899,SKNSHRA@0.022423, 0 0 0 0 ENSG00000231298.1 ENST00000449712.1 chr10:4693353-4720324 5 698 26265 intergenic 0.07 0 1,1,1 0 0,0,0 0 3.98568437083571 0 8.35386819484241 2.94407005520655 0 12.1318051575931 4.21819912430992 0 0 0 chimp,human,macaque,marmoset,orangutan, lincRNA processed_transcript A549@0.237368,AG04450@0.0127195,BJ@0.02134,GM12878@0.0028675,H1HESC@0,HELAS3@0.0570355,HEPG2@0.14233,HMEC@4.42744,HSMM@0.303409,HUVEC@6.08433,K562@0,MCF7@0.0492235,NHEK@7.17015,NHLF@0.034899,SKNSHRA@0.022423, 0 0 0 0 ENSG00000225269.2 ENST00000417883.2 chr10:4697619-4704611 3 1742 5246 intergenic 8.15 1 0,1,1 0 0,0,0 0 0 0 1.56601607347876 1.11151353412124 0 1.63547646383467 1.97807853602745 0 0 0 chimp,human,macaque,marmoset,orangutan, lincRNA lincRNA A549@0.0038655,AG04450@0,BJ@0,GM12878@0,H1HESC@0.003406,HELAS3@0.009568,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0.0193487,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000224115.1 ENST00000435726.1 chr10:5017974-5018398 2 368 54 exonic -0.53 0 0,0,0 0 0,0,0 0 0 0 0 0 0 12.4510869565217 60.9259259259259 0 0 0 chimp,elephant,guinea_pig,horse,human,macaque,marmoset,orangutan,rabbit, antisense antisense A549@34.6351,AG04450@0.200651,BJ@0.118035,GM12878@0.138428,H1HESC@0.316761,HELAS3@1.03788,HEPG2@1.44363,HMEC@0,HSMM@0,HUVEC@0.096459,K562@0.312495,MCF7@0.429703,NHEK@0.0897943,NHLF@0,SKNSHRA@0.161405, 0 0 0 0 ENSG00000226198.1 ENST00000443701.1 chr10:5033750-5034174 2 368 54 exonic -0.53 0 0,0,0 0 0,0,0 0 0 0 0 0 0 25.6413043478261 108 0 0 0 chimp,elephant,guinea_pig,horse,human,macaque,marmoset,orangutan,rabbit, antisense antisense A549@29.5362,AG04450@0.200651,BJ@0.137375,GM12878@0.146332,H1HESC@0.396747,HELAS3@1.07173,HEPG2@1.56723,HMEC@0,HSMM@0.006161,HUVEC@0.10303,K562@0.378875,MCF7@0.794424,NHEK@0.0933623,NHLF@0,SKNSHRA@0.213029, 0 0 0 0 ENSG00000224251.1 ENST00000451575.1 chr10:5038045-5039569 2 430 1092 exonic 0.01 0 0,1,0 0 0,0,0 8.96511627906977 0 14.906 11.8255813953488 0 16.189 21.4302325581395 0 71.624 0 0 chimp,human,macaque,marmoset,orangutan, antisense antisense A549@0.126016,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0.021613,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0.00872367,NHLF@0,SKNSHRA@0.01695, 0 0 0 0 ENSG00000224251.1 ENST00000440414.1 chr10:5038074-5039572 3 299 1195 intronic 0 0 0,0,0 0 0,0,0 0 0 19.018 0 0 21.613 0 0 81.324 0 0 chimp,human,macaque,marmoset,orangutan, antisense antisense A549@0.126016,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0.021613,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0.00872367,NHLF@0,SKNSHRA@0.01695, 0 0 0 0 ENSG00000231039.1 ENST00000428920.1 chr10:5276321-5305165 2 475 28367 intergenic 0 0 0,1,0 0 0,0,0 0 0 0 0 0 0 244.882105263158 0 65.163 0 0 chimp,cow,dog,elephant,guinea_pig,horse,human,macaque,marmoset,mouse,orangutan,pig,rabbit, lincRNA lincRNA A549@0.039863,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0.0175015,HEPG2@0.114664,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000224034.1 ENST00000449457.1 chr10:5307996-5313199 2 690 4511 intergenic -2.30 0 0,1,0 0 0,0,0 0 0 0 0 0 0 0 0 0 0 0 chimp,human,orangutan, lincRNA lincRNA A549@4.31504,AG04450@0.013613,BJ@0.0278255,GM12878@0.239501,H1HESC@0.0170005,HELAS3@0.153827,HEPG2@0.101534,HMEC@0.035503,HSMM@0.040579,HUVEC@0.072521,K562@0.37922,MCF7@0.020535,NHEK@0.0320457,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000205488.3 ENST00000380330.3 chr10:5556207-5565140 3 4123 4806 intergenic 13.05 0 0,0,1 0 0,1,0 0 0 0 0.521707494542809 3.05056179775281 0 0.547902013097259 3.19121930919684 0 1 1 chimp,human,macaque,marmoset,orangutan, antisense antisense A549@0.035666,AG04450@0.001276,BJ@0.00179,GM12878@0,H1HESC@0,HELAS3@0.0378275,HEPG2@0.026109,HMEC@0.831744,HSMM@0.015869,HUVEC@0.0018355,K562@0.003611,MCF7@0.537374,NHEK@0.216154,NHLF@0.000473,SKNSHRA@0.017334, 0 0 0 0 ENSG00000205488.3 ENST00000543008.1 chr10:5556207-5565140 2 4529 4402 intergenic 13.05 0 0,0,1 0 0,1,0 0 0 0 0.474939280194303 3.33053157655611 0 0.498785603886068 3.48409813721036 0 1 1 chimp,human,macaque,marmoset,orangutan, antisense antisense A549@0.035666,AG04450@0.001276,BJ@0.00179,GM12878@0,H1HESC@0,HELAS3@0.0378275,HEPG2@0.026109,HMEC@0.831744,HSMM@0.015869,HUVEC@0.0018355,K562@0.003611,MCF7@0.537374,NHEK@0.216154,NHLF@0.000473,SKNSHRA@0.017334, 0 0 0 0 ENSG00000205488.3 ENST00000542093.1 chr10:5559244-5568209 3 557 8404 exonic 13.05 0 0,1,0 0 0,1,0 0 4.69169443122323 0 0 16.7991432651119 0 0 26.227153736316 0 0 0 chimp,horse,human,macaque,marmoset,orangutan, antisense antisense A549@0.035666,AG04450@0.001276,BJ@0.00179,GM12878@0,H1HESC@0,HELAS3@0.0378275,HEPG2@0.026109,HMEC@0.831744,HSMM@0.015869,HUVEC@0.0018355,K562@0.003611,MCF7@0.537374,NHEK@0.216154,NHLF@0.000473,SKNSHRA@0.017334, 0 0 0 0 ENSG00000205488.3 ENST00000545372.1 chr10:5559332-5568204 4 575 8291 exonic 13.05 0 0,1,0 0 0,1,0 0 4.75563864431311 0 0 17.0281027620311 0 0 26.5846098178748 0 0 1 chimp,human,marmoset,orangutan, antisense antisense A549@0.035666,AG04450@0.001276,BJ@0.00179,GM12878@0,H1HESC@0,HELAS3@0.0378275,HEPG2@0.026109,HMEC@0.831744,HSMM@0.015869,HUVEC@0.0018355,K562@0.003611,MCF7@0.537374,NHEK@0.216154,NHLF@0.000473,SKNSHRA@0.017334, 0 0 0 0 ENSG00000256462.1 ENST00000442008.2 chr10:5566939-5567705 2 593 171 exonic 0 0 1,1,1 0 0,0,0 66.4907251264756 0 0 186.79258010118 57.812865497076 0 319.865092748735 57.1929824561403 0 0 0 cat,chimp,cow,dog,elephant,guinea_pig,horse,human,macaque,marmoset,mouse,opossum,orangutan,panda,pig,platypus,rabbit,rat, antisense antisense A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0.0035605,HMEC@0.193298,HSMM@0,HUVEC@0,K562@0,MCF7@0.021267,NHEK@0.0849043,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000242147.1 ENST00000478294.1 chr10:5636954-5638081 2 695 430 intergenic -2.27 0 1,1,1 0 0,0,0 0 0 0 6.94524495677233 0 10.132 7.99423631123919 0 14.824 0 0 cat,chimp,cow,dog,elephant,guinea_pig,horse,human,macaque,marmoset,orangutan,panda,pig,rabbit, lincRNA lincRNA A549@1.17812,AG04450@0.403286,BJ@1.14055,GM12878@0.0057845,H1HESC@0,HELAS3@0.284811,HEPG2@0.0325405,HMEC@14.3694,HSMM@0.221552,HUVEC@0.0407165,K562@0.01371,MCF7@0.271754,NHEK@11.1696,NHLF@0.022333,SKNSHRA@2.03458, 0 0 0 0 ENSG00000231483.1 ENST00000425246.1 chr10:5650438-5652756 5 608 1702 intergenic -3.65 0 0,1,1 0 0,0,0 0 0 0 0 0 0 0 22.5099882491187 0 0 0 chimp,human,macaque,marmoset,orangutan, lincRNA lincRNA A549@0.485197,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0.241405,HEPG2@0.0979965,HMEC@4.22838,HSMM@0.0148745,HUVEC@0,K562@0,MCF7@0.172702,NHEK@0.368491,NHLF@0,SKNSHRA@0.022246, 0 0 0 0 ENSG00000228951.1 ENST00000427341.1 chr10:5658825-5660124 3 654 641 intergenic 1.63 0 0,1,0 0 0,0,0 43.9877675840979 0 0 68.7492354740061 0 0 87.1131498470948 0 0 0 0 chimp,human,marmoset,orangutan,rabbit, lincRNA lincRNA A549@0,AG04450@0,BJ@0.0073665,GM12878@0.0214065,H1HESC@0.0180935,HELAS3@0,HEPG2@0.0267565,HMEC@11.6418,HSMM@0,HUVEC@0,K562@0,MCF7@0.00306,NHEK@0.818736,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000226647.1 ENST00000411512.1 chr10:5754177-5786030 2 694 31157 intronic -1.67 0 0,0,0 0 0,0,0 119.913544668588 13.1371762364798 0 210.840057636888 30.3877459318933 0 198.412103746398 28.0027281188818 0 0 0 cat,chimp,cow,dog,elephant,guinea_pig,horse,human,macaque,marmoset,opossum,orangutan,panda,pig,rabbit, antisense antisense A549@0.0039685,AG04450@0,BJ@0,GM12878@0.021997,H1HESC@0,HELAS3@0.0426995,HEPG2@0.008419,HMEC@0,HSMM@0,HUVEC@0,K562@0.003916,MCF7@0,NHEK@0.001897,NHLF@0,SKNSHRA@0.01451, 0 0 0 0 ENSG00000232807.1 ENST00000397264.3 chr10:5979079-5987863 2 638 8144 exonic 7.83 0 0,1,1 1 0,0,0 90.2852664576803 1.33988212180747 0 77.1959247648903 5.17534381139489 0 81.8996865203762 5.09479371316306 0 0 0 chimp,human,rabbit, antisense antisense A549@0.0052695,AG04450@0.161907,BJ@0.58659,GM12878@0.0165655,H1HESC@0,HELAS3@0.015386,HEPG2@0.032624,HMEC@0.090758,HSMM@0.035273,HUVEC@1.1181,K562@0.0091055,MCF7@0,NHEK@0.0993127,NHLF@0.101448,SKNSHRA@0.003551, 0 0 0 0 ENSG00000232807.1 ENST00000448685.1 chr10:5985453-5987701 2 508 1738 intergenic 3.93 0 1,1,1 1 0,0,0 0 0 0 0 0 0 0 0 0 0 0 chimp,human,macaque,marmoset,orangutan, antisense antisense A549@0.0052695,AG04450@0.161907,BJ@0.58659,GM12878@0.0165655,H1HESC@0,HELAS3@0.015386,HEPG2@0.032624,HMEC@0.090758,HSMM@0.035273,HUVEC@1.1181,K562@0.0091055,MCF7@0,NHEK@0.0993127,NHLF@0.101448,SKNSHRA@0.003551, 0 0 0 0 ENSG00000232807.1 ENST00000454321.1 chr10:5985467-5987712 2 379 1864 intergenic 0.08 1 1,1,1 1 0,0,0 0 0 0 0 0 0 0 0 0 0 0 chimp,human,macaque,orangutan, antisense antisense A549@0.0052695,AG04450@0.161907,BJ@0.58659,GM12878@0.0165655,H1HESC@0,HELAS3@0.015386,HEPG2@0.032624,HMEC@0.090758,HSMM@0.035273,HUVEC@1.1181,K562@0.0091055,MCF7@0,NHEK@0.0993127,NHLF@0.101448,SKNSHRA@0.003551, 0 0 0 0 ENSG00000229664.1 ENST00000440436.1 chr10:6067941-6078390 3 477 9968 exonic -4.69 0 0,0,1 0 0,0,0 0 0 0 2.13836477987421 2.67154895666132 7.777 2.17190775681342 2.83978731942215 7.874 0 0 chimp,dog,human,macaque,marmoset,orangutan, antisense antisense A549@0.0140525,AG04450@0,BJ@0,GM12878@0.0110645,H1HESC@0,HELAS3@0.004869,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000229260.1 ENST00000446200.1 chr10:6163691-6168004 2 369 3942 intergenic 0 0 0,1,0 0 0,0,0 0 0 0 0 3.49949264332826 0 0 3.65829528158295 0 0 0 chimp,human,macaque,orangutan, antisense antisense A549@0,AG04450@0.0594745,BJ@0.0265445,GM12878@1.08372,H1HESC@0.011183,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0.0301235,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0.0365815,SKNSHRA@0.006126, 0 0 0 0 ENSG00000232547.1 ENST00000435526.1 chr10:6168005-6179520 4 405 11104 intergenic 3.41 0 0,0,0 0 0,0,0 0 0 0 0 0 0 0 0 0 0 0 chimp,human,macaque,marmoset,orangutan, antisense antisense A549@0,AG04450@0,BJ@0,GM12878@0.647814,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0.043621,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000224502.1 ENST00000438246.1 chr10:6221120-6222152 2 407 623 intronic 0.61 0 0,0,1 0 0,0,0 0 0 0 0 0 0 0 0 0 0 0 chimp,human,macaque,orangutan, sense_intronic sense_intronic A549@0.01691,AG04450@0.030623,BJ@0.010281,GM12878@0.105112,H1HESC@0.0055405,HELAS3@0.103824,HEPG2@0.0581,HMEC@0,HSMM@0,HUVEC@0.031939,K562@0.12834,MCF7@0.0281305,NHEK@0,NHLF@0,SKNSHRA@0.057084, 0 0 0 0 ENSG00000213994.3 ENST00000427630.1 chr10:6239575-6244656 2 436 4643 intronic -1.09 0 1,1,1 0 0,0,0 0 0 0 0 16.6312728839113 83.263 0 14.0288606504415 91.675 0 0 human,macaque,orangutan,pig, antisense antisense A549@0.129843,AG04450@0.0209885,BJ@0.016767,GM12878@0.179092,H1HESC@0.0575785,HELAS3@0.0657335,HEPG2@0.0833095,HMEC@0,HSMM@0.0146,HUVEC@0.022205,K562@0.0106025,MCF7@0.0370715,NHEK@0,NHLF@0,SKNSHRA@0.268805, 0 0 0 0 ENSG00000237943.1 ENST00000445427.1 chr10:6622381-6626261 2 1131 2747 intergenic -2.61 1 1,1,1 1 0,0,0 0 3.51656352384419 0 2.7763041556145 10.3378230797233 0 2.60831122900088 13.4812522752093 0 0 0 chimp,elephant,horse,human,macaque,marmoset,orangutan,panda, lincRNA processed_transcript A549@4.12026,AG04450@0.517255,BJ@0.087648,GM12878@1.69694,H1HESC@5.71767,HELAS3@1.24968,HEPG2@0.533547,HMEC@2.4927,HSMM@0.109588,HUVEC@0.703992,K562@10.3173,MCF7@0,NHEK@1.71707,NHLF@0.111072,SKNSHRA@0.539615, 0 0 0 0 ENSG00000237943.1 ENST00000455810.1 chr10:6622387-6625990 3 917 2682 intergenic -2.61 0 1,1,1 1 0,0,0 0 3.60178970917226 0 3.42420937840785 10.5883668903803 0 3.21701199563795 13.8079791200597 0 0 0 chimp,horse,human,macaque,marmoset, lincRNA processed_transcript A549@4.12026,AG04450@0.517255,BJ@0.087648,GM12878@1.69694,H1HESC@5.71767,HELAS3@1.24968,HEPG2@0.533547,HMEC@2.4927,HSMM@0.109588,HUVEC@0.703992,K562@10.3173,MCF7@0,NHEK@1.71707,NHLF@0.111072,SKNSHRA@0.539615, 0 0 0 0 ENSG00000237943.1 ENST00000414894.1 chr10:6625638-6627641 2 363 1638 intergenic -2.61 0 0,1,0 0 0,0,0 0 0 9.66 8.65013774104683 0 28.398 8.1267217630854 0 37.033 0 0 chimp,guinea_pig,horse,human,macaque,orangutan,panda, lincRNA processed_transcript A549@4.12026,AG04450@0.517255,BJ@0.087648,GM12878@1.69694,H1HESC@5.71767,HELAS3@1.24968,HEPG2@0.533547,HMEC@2.4927,HSMM@0.109588,HUVEC@0.703992,K562@10.3173,MCF7@0,NHEK@1.71707,NHLF@0.111072,SKNSHRA@0.539615, 0 0 0 0 ENSG00000237943.1 ENST00000449648.1 chr10:6625641-6626260 2 419 198 intergenic -2.61 1 1,1,1 0 0,0,0 0 0 9.66 7.49403341288783 0 28.398 7.04057279236277 0 37.033 0 0 chimp,dog,elephant,horse,human,macaque,marmoset,orangutan,panda, lincRNA processed_transcript A549@4.12026,AG04450@0.517255,BJ@0.087648,GM12878@1.69694,H1HESC@5.71767,HELAS3@1.24968,HEPG2@0.533547,HMEC@2.4927,HSMM@0.109588,HUVEC@0.703992,K562@10.3173,MCF7@0,NHEK@1.71707,NHLF@0.111072,SKNSHRA@0.539615, 0 0 0 0 ENSG00000225948.1 ENST00000448835.1 chr10:6660678-6667308 4 495 6129 intergenic -4.52 0 0,0,0 0 0,0,0 0 0 0 28.4707070707071 9.04046337085985 0 26.4969696969697 17.6286506771088 0 0 0 cat,chimp,dog,elephant,guinea_pig,horse,human,macaque,marmoset,orangutan,rabbit, lincRNA lincRNA A549@0.083432,AG04450@0,BJ@0,GM12878@0.028184,H1HESC@0.065266,HELAS3@0.0281025,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0.0693585,MCF7@0,NHEK@0.0132227,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000223784.1 ENST00000417112.1 chr10:6779344-6780988 2 915 727 intergenic -2.06 1 0,1,1 0 0,0,0 0 0 0 8.36174863387978 0 0 17.168306010929 0 0 0 0 cat,chimp,elephant,human,marmoset,orangutan, lincRNA lincRNA A549@7.86655,AG04450@0.113171,BJ@0.0364995,GM12878@0.0057915,H1HESC@1.30646,HELAS3@1.82614,HEPG2@0.92511,HMEC@20.1555,HSMM@0.228821,HUVEC@0.006491,K562@0.0058395,MCF7@0.0839825,NHEK@6.14084,NHLF@0.0276615,SKNSHRA@0.009914, 0 0 0 0 ENSG00000238266.1 ENST00000436383.1 chr10:6821560-6884868 5 3065 60235 intergenic 1.36 1 0,1,0 0 0,0,0 2.92659053833605 2.59591599568357 0 9.84763458401305 7.60338673528679 0 20.8300163132137 8.17695691873495 0 0 0 chimp,elephant,human,macaque,orangutan,panda, lincRNA processed_transcript A549@6.43183,AG04450@0.169029,BJ@0.0676745,GM12878@0.0013135,H1HESC@0.720733,HELAS3@2.35683,HEPG2@0.444757,HMEC@2.87455,HSMM@2.66071,HUVEC@0,K562@0,MCF7@0,NHEK@1.60365,NHLF@0.047498,SKNSHRA@0.0036975, 0 0 0 0 ENSG00000234248.1 ENST00000457632.1 chr10:6933419-6962434 3 296 28715 intergenic -1.28 0 0,0,0 0 0,0,0 0 5.38829879853735 0 0 14.0723315340414 2.16 0 17.7148528643566 29.273 0 0 chimp,human,macaque,orangutan, lincRNA lincRNA A549@0,AG04450@0.0107845,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000223581.1 ENST00000420049.1 chr10:7139114-7139637 2 434 87 intergenic -1.79 0 0,1,0 0 0,0,0 0 0 0 0 0 13.113 0 0 16.224 0 0 chimp,human,macaque,orangutan, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000232591.1 ENST00000420395.1 chr10:7487520-7513904 4 553 25825 intergenic 1.52 0 0,1,0 0 0,0,0 0 0.564375605033882 0 0 1.60491771539206 9.99 0 2.01204259438529 10.224 0 0 chimp,human,macaque,orangutan, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@1.12702,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0.0049925, 0 0 0 0 ENSG00000256497.1 ENST00000535221.1 chr10:7527347-7534658 3 1411 5896 intergenic 1.38 0 0,1,0 0 0,0,0 13.6924167257264 7.0598710990502 0 3.82423812898653 12.5731004070556 47.384 2.08150248051028 13.9759158751696 60.177 0 0 chimp,horse,human,macaque,marmoset,orangutan,rabbit, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0.087904,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0.055074, 0 0 0 0 ENSG00000230121.1 ENST00000414631.1 chr10:7575169-7578527 3 711 2643 intergenic -2.79 0 0,0,0 0 0,0,0 0 0 0 2.09282700421941 0 4.59 8.47257383966245 0 5.079 0 0 chimp,elephant,horse,human,macaque,orangutan,panda,rabbit, antisense antisense A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0.0409225,HEPG2@0.114469,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000227546.1 ENST00000414392.1 chr10:7757565-7758692 2 495 630 intronic 0 0 0,0,0 0 0,0,0 0 0 5.98 0 0 37.314 0 0 46.153 0 0 chimp,human,macaque,orangutan, antisense antisense A549@0,AG04450@0,BJ@0.026045,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000197308.4 ENST00000355358.1 chr10:8092413-8095447 2 2212 820 intergenic 18.65 0 0,1,1 1 0,0,0 29.0348101265823 216.823170731707 68.376 113.371157323689 251.474390243902 70.856 104.285262206148 245.528048780488 48.61 0 0 chimp,cow,elephant,horse,human,macaque,marmoset,orangutan,panda,rat, lincRNA processed_transcript A549@0.005971,AG04450@0.001337,BJ@0,GM12878@0,H1HESC@0,HELAS3@0.0085655,HEPG2@0,HMEC@0.067867,HSMM@0,HUVEC@0.211222,K562@0,MCF7@2.27409,NHEK@0.00844833,NHLF@0,SKNSHRA@0.720984, 0 0 0 0 ENSG00000197308.4 ENST00000420815.1 chr10:8092439-8094458 3 647 1368 intergenic 18.65 0 1,1,1 0 0,0,0 24.112828438949 149.364766081871 14.95 132.157650695518 225.795321637427 56.639 229.009273570325 214.019005847953 68.081 0 0 chimp,cow,dog,elephant,guinea_pig,horse,human,macaque,marmoset,mouse,orangutan,panda,pig,rabbit,rat, lincRNA processed_transcript A549@0.005971,AG04450@0.001337,BJ@0,GM12878@0,H1HESC@0,HELAS3@0.0085655,HEPG2@0,HMEC@0.067867,HSMM@0,HUVEC@0.211222,K562@0,MCF7@2.27409,NHEK@0.00844833,NHLF@0,SKNSHRA@0.720984, 0 0 0 0 ENSG00000197308.4 ENST00000438755.1 chr10:8092439-8094458 3 672 1343 intergenic 18.65 0 1,1,1 0 0,0,0 23.2157738095238 152.145197319434 14.95 143.200892857143 222.012658227848 56.639 235.035714285714 210.724497393894 68.081 0 0 chimp,cow,dog,elephant,horse,human,macaque,marmoset,mouse,orangutan,panda,pig,rabbit,rat, lincRNA processed_transcript A549@0.005971,AG04450@0.001337,BJ@0,GM12878@0,H1HESC@0,HELAS3@0.0085655,HEPG2@0,HMEC@0.067867,HSMM@0,HUVEC@0.211222,K562@0,MCF7@2.27409,NHEK@0.00844833,NHLF@0,SKNSHRA@0.720984, 0 0 0 0 ENSG00000232638.1 ENST00000418270.1 chr10:8093504-8095047 3 399 1140 intergenic -0.37 0 0,1,1 0 0,0,0 0 169.074561403509 27.28 0 213.104385964912 182.23 0 220.180701754386 152.791 0 0 chimp,horse,human,macaque,marmoset,orangutan,pig, lincRNA lincRNA A549@0.02365,AG04450@0,BJ@0,GM12878@0,H1HESC@0.0072395,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0.30263,K562@0,MCF7@4.07631,NHEK@0,NHLF@0,SKNSHRA@0.393942, 0 0 0 0 ENSG00000243350.1 ENST00000417359.1 chr10:8094205-8095219 2 563 449 intergenic 1.54 1 0,0,1 1 0,0,0 18.7921847246892 9.22048997772828 0 43.0035523978686 40.0734966592428 45.394 39.9449378330373 65.7951002227172 39.255 0 0 chimp,cow,elephant,horse,human,macaque,marmoset,orangutan,panda,pig,rabbit,rat, lincRNA processed_transcript A549@0,AG04450@0,BJ@0,GM12878@0.028416,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0.016696,HSMM@0.003642,HUVEC@0.042317,K562@0,MCF7@2.63846,NHEK@0.005878,NHLF@0,SKNSHRA@0.154712, 0 0 0 0 ENSG00000243350.1 ENST00000458727.1 chr10:8094206-8095412 2 818 386 intergenic 1.54 1 1,1,1 1 0,0,0 12.9339853300733 10.7253886010363 50.246 35.9022004889976 46.6139896373057 74.561 30.5537897310513 76.5336787564767 60.575 0 0 chimp,cow,elephant,horse,human,macaque,marmoset,orangutan,panda,rabbit, lincRNA processed_transcript A549@0,AG04450@0,BJ@0,GM12878@0.028416,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0.016696,HSMM@0.003642,HUVEC@0.042317,K562@0,MCF7@2.63846,NHEK@0.005878,NHLF@0,SKNSHRA@0.154712, 0 0 0 0 ENSG00000232170.1 ENST00000454056.1 chr10:8301294-8302767 2 363 1108 intergenic -0.12 1 1,1,1 0 0,0,0 0 65.0794223826715 0 0 134.775270758123 0 0 137.662454873646 1.632 0 0 cat,chimp,cow,elephant,horse,human,macaque,marmoset,orangutan,panda,rabbit,rat, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000232170.1 ENST00000428165.1 chr10:8301294-8310268 5 911 8055 intergenic -1.01 1 0,1,1 0 0,0,0 18.3260153677278 17.4751086281813 0 33.6816684961581 36.098696461825 0 41.9659714599341 36.7884543761639 0 0 0 chimp,guinea_pig,horse,human,macaque,marmoset,orangutan, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000226861.1 ENST00000413941.1 chr10:8340860-8343630 2 899 1869 intergenic 4.03 0 0,1,0 0 0,0,0 229.213570634038 169.646869983949 0 323.79977753059 173.072766185126 10.574 325.357063403782 189.765650080257 11.275 0 0 cat,chimp,cow,dog,elephant,guinea_pig,horse,human,macaque,marmoset,mouse,orangutan,panda,pig,rabbit,rat, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0.0027465,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000226990.1 ENST00000413286.1 chr10:8442823-8503826 4 426 60571 intergenic -0.65 0 0,0,0 0 0,0,0 0 8.25766455894735 0 3.59154929577465 15.2692047349392 24.045 3.73239436619718 31.7231183239504 28.002 0 0 chimp,cow,guinea_pig,human,macaque,marmoset,orangutan,panda, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000234752.1 ENST00000447297.1 chr10:8939952-8956559 4 362 16239 intergenic 8.40 1 0,1,0 0 0,0,0 0 29.045138247429 0 0 38.240716792906 0 2.01381215469613 50.6313812426874 0 0 0 chimp,human,macaque,orangutan, lincRNA lincRNA A549@0,AG04450@0,BJ@0.019551,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0.0892275,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000223808.1 ENST00000456526.1 chr10:9012088-9015431 2 675 2666 intergenic -2.72 0 0,0,0 0 0,0,0 0 41.274943735934 0 68.24 45.4744936234058 0 76.7481481481481 60.3994748687172 0 0 0 cat,chimp,cow,dog,elephant,guinea_pig,horse,human,macaque,marmoset,orangutan,panda,pig,rabbit, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@5.49059,NHEK@0.034973,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000230014.1 ENST00000458168.1 chr10:9317796-9329020 2 492 10730 intergenic 4.09 1 0,1,0 0 0,0,0 0 48.1463187325256 0 0 66.9594594594595 0 0 67.883504193849 0 0 0 chimp,cow,dog,elephant,horse,human,macaque,marmoset,orangutan,panda,pig,rabbit, lincRNA lincRNA A549@0,AG04450@0,BJ@0.0048985,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0.0162795,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000228636.1 ENST00000419836.1 chr10:9800746-9801200 2 342 110 intergenic 6.70 1 0,0,1 0 0,0,0 0 0 0 0 0 0 0 0 0 0 0 NA lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0.030254,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0.0148437,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000224788.1 ENST00000429539.1 chr10:10100685-10105465 4 571 4203 intergenic 3.13 1 0,0,0 0 0,0,0 0 59.5346181299072 107.181 0 76.3633119200571 73.277 0 70.1196764216036 81.278 0 0 chimp,dog,guinea_pig,horse,human,macaque,marmoset,orangutan,panda, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0.048053,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000234306.1 ENST00000455871.1 chr10:10407143-10408450 2 333 972 intergenic 0 0 0,0,0 0 0,0,0 224.6996996997 229.777777777778 0 418.189189189189 260.40329218107 0 393.291291291291 328.100823045268 0 0 0 cat,chimp,cow,dog,elephant,guinea_pig,horse,human,macaque,marmoset,mouse,opossum,orangutan,panda,pig,platypus,rabbit,rat, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000227823.1 ENST00000435106.1 chr10:10477912-10504248 5 1246 25082 intergenic 1.81 0 0,0,0 0 0,0,0 60.5304975922953 2.35686946814449 290.798 107.023274478331 7.76596762618611 386.008 121.835473515249 7.94872817159716 385.232 0 0 cat,chimp,cow,dog,horse,human,macaque,marmoset,opossum,orangutan,panda,rabbit,rat, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000225383.1 ENST00000446372.1 chr10:10826402-10836877 4 869 9600 intergenic -0.47 0 1,1,1 0 0,0,0 0 14.003125 0 5.90333716915995 24.0684375 0 5.43153049482163 28.0275 0 0 0 chimp,human,macaque,marmoset,orangutan, lincRNA lincRNA A549@0.0104425,AG04450@0.0159255,BJ@0.008885,GM12878@0.002309,H1HESC@0.0023765,HELAS3@0,HEPG2@0,HMEC@3.32021,HSMM@9.54645,HUVEC@0.106836,K562@0,MCF7@0,NHEK@12.0219,NHLF@0.820345,SKNSHRA@0, 0 0 0 0 ENSG00000225383.1 ENST00000415590.1 chr10:10828603-10836930 3 396 7927 intergenic 0.67 0 0,1,0 0 0,0,0 0 16.9584962785417 0 12.9545454545455 29.1481014255078 0 11.9191919191919 33.9427273874101 0 0 0 chimp,dog,horse,human,macaque,marmoset,orangutan,pig,rabbit, lincRNA lincRNA A549@0.0104425,AG04450@0.0159255,BJ@0.008885,GM12878@0.002309,H1HESC@0.0023765,HELAS3@0,HEPG2@0,HMEC@3.32021,HSMM@9.54645,HUVEC@0.106836,K562@0,MCF7@0,NHEK@12.0219,NHLF@0.820345,SKNSHRA@0, 0 0 0 0 ENSG00000225383.1 ENST00000434919.1 chr10:10828607-10836943 2 252 8082 intergenic -0.47 0 0,1,0 0 0,0,0 0 16.6332590942836 0 0 29.2238307349666 0 0 33.8757733234348 0 0 0 chimp,elephant,horse,human,macaque,marmoset,orangutan, lincRNA lincRNA A549@0.0104425,AG04450@0.0159255,BJ@0.008885,GM12878@0.002309,H1HESC@0.0023765,HELAS3@0,HEPG2@0,HMEC@3.32021,HSMM@9.54645,HUVEC@0.106836,K562@0,MCF7@0,NHEK@12.0219,NHLF@0.820345,SKNSHRA@0, 0 0 0 0 ENSG00000229240.1 ENST00000441855.1 chr10:10976903-10978626 2 512 1209 intergenic 3.96 1 0,0,0 0 0,0,0 0 0 0 82.47265625 0 9.096 90.57421875 0 11.674 0 0 cat,chimp,cow,dog,elephant,guinea_pig,horse,human,macaque,marmoset,mouse,orangutan,pig,rabbit, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000229240.1 ENST00000428520.1 chr10:10976903-10994058 6 1038 16107 intergenic 6.21 1 0,0,0 0 0,0,0 15.028901734104 7.89079282299621 6.061 97.5944123314065 28.2457316694605 75.68 103.616570327553 30.3830011796113 86.101 0 0 cat,chimp,horse,human,marmoset,mouse,orangutan, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000229240.1 ENST00000450174.1 chr10:10988869-10994115 3 737 4505 intergenic 2.53 0 0,0,0 0 0,0,0 21.1668928086839 5.32741398446171 25.366 49.7951153324288 11.9447280799112 110.108 56.2089552238806 13.4250832408435 117.638 0 0 cat,chimp,elephant,guinea_pig,human,macaque,marmoset,orangutan,panda,pig, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000231496.1 ENST00000420825.1 chr10:11002114-11012779 3 534 10127 intergenic -15.87 1 0,0,1 0 0,0,0 0 11.0210328823936 0 0 36.0497679470722 42.987 0 40.5336229880517 49.987 0 0 chimp,horse,human,macaque,marmoset,orangutan,panda, lincRNA lincRNA A549@0,AG04450@0.0156915,BJ@0.015039,GM12878@0.0272295,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0.174851,K562@0,MCF7@0,NHEK@0,NHLF@0.0143725,SKNSHRA@0, 0 0 0 0 ENSG00000228027.1 ENST00000437825.1 chr10:11052127-11053082 2 242 711 intronic -7.13 0 0,1,0 0 0,0,0 0 0 76.796 0 5.92967651195499 98.504 0 6.33614627285513 71.524 0 0 chimp,human,macaque,marmoset,orangutan, antisense antisense A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000229206.1 ENST00000428853.1 chr10:11072297-11072831 2 431 101 intronic 1.47 0 0,0,1 0 0,0,0 0 0 0 3.32714617169374 0 1.24 0 0 1.295 0 0 chimp,human,macaque,orangutan, sense_intronic sense_intronic A549@0,AG04450@0,BJ@0.0056845,GM12878@0.025535,H1HESC@0.068581,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0.078516,HUVEC@0.068555,K562@0,MCF7@0,NHEK@0.064184,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000237986.1 ENST00000432370.1 chr10:11117094-11140436 4 847 22489 intronic -6.96 0 0,0,0 0 0,0,0 2.38724911452184 15.3303392769799 128.568 22.4510035419126 24.8814531548757 94.247 24.6363636363636 30.9682511450042 113.445 0 0 cat,chimp,dog,horse,human,macaque,marmoset,orangutan,panda,rabbit, antisense antisense A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000237986.1 ENST00000420634.1 chr10:11139277-11140123 2 142 702 intronic 0 0 0,0,1 0 0,0,0 0 0 0 0 0 0 0 0 0 0 0 chimp,human,macaque,marmoset,orangutan, antisense antisense A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000230322.1 ENST00000417273.1 chr10:11210885-11213339 2 428 2024 intronic 5.46 0 0,0,1 0 0,0,0 0 0 0 3.76168224299065 3.3804347826087 5.668 10.892523364486 3.56620553359684 3.3 0 0 chimp,guinea_pig,human,macaque,marmoset,orangutan, antisense antisense A549@0,AG04450@0,BJ@0,GM12878@1.15138,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000229763.1 ENST00000429092.1 chr10:11495945-11497386 2 501 938 intergenic -3.36 0 0,0,0 0 0,0,0 0 0 0 0 0 0 0 0 0 0 0 chimp,dog,human,macaque,orangutan,rabbit, antisense antisense A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0.037902,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000225778.1 ENST00000445498.1 chr10:11891612-11936699 6 3135 41942 exonic 9.79 1 1,1,1 1 0,0,0 0 0.235801821563111 0 1.37511961722488 6.72268847456011 0 0.880701754385965 10.6404081827285 30.736 0 0 chimp,human,macaque,marmoset, antisense antisense A549@0.000691,AG04450@0.0127035,BJ@0.061768,GM12878@0.0012835,H1HESC@0.034721,HELAS3@0.0445245,HEPG2@0.0061545,HMEC@0.002607,HSMM@0.005806,HUVEC@0.0506835,K562@2.70335,MCF7@0.0179185,NHEK@0.0329257,NHLF@0.0210035,SKNSHRA@0.001447, 0 0 0 0 ENSG00000225778.1 ENST00000453242.1 chr10:11899288-11916794 4 471 17029 exonic -1.87 0 0,0,0 1 0,0,0 0 0.580773973809384 0 60.4904458598726 10.1412296670386 5.185 57.3673036093418 14.5966292794644 4.624 0 0 chimp,human,macaque,marmoset,orangutan,panda, antisense antisense A549@0.000691,AG04450@0.0127035,BJ@0.061768,GM12878@0.0012835,H1HESC@0.034721,HELAS3@0.0445245,HEPG2@0.0061545,HMEC@0.002607,HSMM@0.005806,HUVEC@0.0506835,K562@2.70335,MCF7@0.0179185,NHEK@0.0329257,NHLF@0.0210035,SKNSHRA@0.001447, 0 0 0 0 ENSG00000229098.1 ENST00000457248.1 chr10:12124194-12125895 2 351 1348 intronic 1.12 0 0,0,0 0 0,0,0 4.58689458689459 15.0148367952522 61.88 0 0 85.301 0 0 91.967 0 0 human,marmoset, antisense antisense A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000228302.1 ENST00000421657.1 chr10:12287627-12289844 2 1912 303 exonic 1.94 0 0,0,0 0 0,0,0 20.1652719665272 0 0 25.0852510460251 0 0 84.8875523012552 34.5181518151815 0 0 0 chimp,human,macaque,marmoset, antisense antisense A549@0.005473,AG04450@0.006087,BJ@0.005101,GM12878@0.0059345,H1HESC@0,HELAS3@0.005134,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0.004061,MCF7@0,NHEK@0.001018,NHLF@0,SKNSHRA@0.0037805, 0 0 0 0 ENSG00000233256.1 ENST00000448272.1 chr10:13457202-13465133 2 452 7477 intergenic -0.30 0 0,1,0 0 0,0,0 0 0 0 45.2942477876106 8.94048415139762 0 77.9557522123894 11.9584057777183 0 0 0 cat,chimp,cow,dog,elephant,guinea_pig,horse,human,macaque,marmoset,mouse,opossum,orangutan,panda,rabbit, antisense antisense A549@0.0191245,AG04450@0,BJ@0,GM12878@0.045744,H1HESC@0.027416,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0.064711,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000227175.1 ENST00000438431.1 chr10:13570516-13572262 2 378 1366 exonic 10.22 0 0,1,1 0 0,0,0 0 0 0 29.952380952381 78.5102489019034 56.019 56.6957671957672 77.110541727672 55.159 0 0 chimp,human,marmoset,rabbit, antisense antisense A549@0.0114245,AG04450@0,BJ@0,GM12878@0,H1HESC@0.0234615,HELAS3@0,HEPG2@0.0285095,HMEC@0,HSMM@0,HUVEC@0.117913,K562@0.0070455,MCF7@0.015992,NHEK@0,NHLF@0,SKNSHRA@0.0119415, 0 0 0 0 ENSG00000239665.1 ENST00000440878.1 chr10:13673333-13690230 3 394 16499 exonic -4.86 0 0,0,0 0 0,0,0 0 49.4741499484817 3.28 0 48.0786108248985 26.906 0 52.4934238438693 24.616 0 0 chimp,human,macaque,marmoset,orangutan,panda, processed_transcript processed_transcript A549@1.12927,AG04450@0.271027,BJ@0.306491,GM12878@1.14775,H1HESC@0.451929,HELAS3@0.821678,HEPG2@1.2356,HMEC@0.2627,HSMM@0.245199,HUVEC@0.342903,K562@1.63192,MCF7@0.850768,NHEK@0.793695,NHLF@0.342083,SKNSHRA@0.53563, 0 0 0 0 ENSG00000239665.1 ENST00000437446.1 chr10:13680825-13687279 2 460 5992 exonic -8.12 0 0,0,1 0 0,0,0 47.7130434782609 63.2191255006676 0 34.6217391304348 56.8351134846462 1.736 63.3391304347826 64.0954606141522 1.757 0 0 chimp,elephant,guinea_pig,human,macaque,marmoset,orangutan,rabbit, processed_transcript processed_transcript A549@1.12927,AG04450@0.271027,BJ@0.306491,GM12878@1.14775,H1HESC@0.451929,HELAS3@0.821678,HEPG2@1.2356,HMEC@0.2627,HSMM@0.245199,HUVEC@0.342903,K562@1.63192,MCF7@0.850768,NHEK@0.793695,NHLF@0.342083,SKNSHRA@0.53563, 0 0 0 0 ENSG00000239665.1 ENST00000419851.1 chr10:13689092-13697796 4 821 7877 exonic 4.82 0 0,0,0 0 0,0,0 8.38976857490865 11.8456265075536 192.948 11.2034104750305 15.8952646946807 230.206 12.8038976857491 21.144471245398 233.25 0 0 chimp,human,macaque,marmoset,orangutan,rabbit, processed_transcript processed_transcript A549@1.12927,AG04450@0.271027,BJ@0.306491,GM12878@1.14775,H1HESC@0.451929,HELAS3@0.821678,HEPG2@1.2356,HMEC@0.2627,HSMM@0.245199,HUVEC@0.342903,K562@1.63192,MCF7@0.850768,NHEK@0.793695,NHLF@0.342083,SKNSHRA@0.53563, 0 0 0 0 ENSG00000239665.1 ENST00000430721.1 chr10:13695825-13697929 2 1153 949 exonic 4.82 1 1,1,1 0 0,0,0 5.97398091934085 29.7239199157007 0 7.9774501300954 39.3677555321391 0 9.11708586296617 47.8935721812434 0 0 0 chimp,horse,human,macaque,orangutan,panda,rabbit, processed_transcript processed_transcript A549@1.12927,AG04450@0.271027,BJ@0.306491,GM12878@1.14775,H1HESC@0.451929,HELAS3@0.821678,HEPG2@1.2356,HMEC@0.2627,HSMM@0.245199,HUVEC@0.342903,K562@1.63192,MCF7@0.850768,NHEK@0.793695,NHLF@0.342083,SKNSHRA@0.53563, 0 0 0 0 ENSG00000225112.1 ENST00000412388.1 chr10:13752415-13754054 2 371 1266 intronic 5.34 0 0,1,0 0 0,0,0 0 0 0 15.8544474393531 9.91153238546604 4.19 26.7708894878706 12.3412322274882 8.656 0 0 chimp,cow,elephant,guinea_pig,horse,human,macaque,marmoset,orangutan,rabbit, antisense antisense A549@0,AG04450@0,BJ@0.008676,GM12878@0.007119,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0.006225,MCF7@0.005512,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000234091.1 ENST00000449462.1 chr10:13771383-13798200 3 471 26342 intronic -0.46 0 0,0,1 0 0,0,0 0 8.18369903576038 0 15.0148619957537 11.8034697441348 4.89 29.23991507431 13.287411737909 8.223 0 0 chimp,human,macaque,marmoset,orangutan,pig, antisense antisense A549@0,AG04450@0.0049685,BJ@0,GM12878@0.0134505,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0.011349, 0 0 0 0 ENSG00000229751.1 ENST00000446193.1 chr10:14033815-14049525 3 567 15139 intronic 0.66 0 0,0,0 0 0,0,0 0 8.0251667877667 0 5.10229276895944 16.4085474602021 9.635 5.82010582010582 16.8997952308607 24.787 0 0 chimp,cow,dog,human,macaque,marmoset,mouse,orangutan,rabbit, antisense antisense A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0.012263,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0.0119485, 0 0 0 0 ENSG00000235410.1 ENST00000451617.1 chr10:14116283-14129604 3 787 12530 intronic -0.35 0 0,1,0 0 0,0,0 0 9.94277733439745 0 0 7.27653631284916 0 0 7.77214684756584 0 0 0 chimp,human,macaque,marmoset,mouse,orangutan,pig, antisense antisense A549@0.0054955,AG04450@0,BJ@0.018486,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0.005209,HUVEC@0.003767,K562@0,MCF7@0,NHEK@0.028869,NHLF@0.0147645,SKNSHRA@0.0695195, 0 0 0 0 ENSG00000236495.1 ENST00000443282.1 chr10:14694741-14703690 3 354 8591 intronic -6.21 0 0,0,0 0 0,0,0 0 3.4743336049354 0 108.468926553672 3.9379583284833 0 12.5310734463277 4.49877779071121 0 0 0 chimp,human,macaque,marmoset,orangutan, antisense antisense A549@0.0121605,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0.0115185,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000235177.1 ENST00000439979.1 chr10:14885630-14886747 2 465 650 exonic 5.79 0 1,1,1 0 0,0,0 236.58064516129 81.5907692307692 0 271.858064516129 145.886153846154 0 299.849462365591 153.755384615385 4.154 0 0 cat,chimp,cow,dog,elephant,guinea_pig,horse,human,macaque,marmoset,mouse,orangutan,panda,pig,rabbit,rat, antisense antisense A549@0.0914205,AG04450@0.005043,BJ@0,GM12878@0.0213195,H1HESC@0,HELAS3@0.017876,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0.015677,MCF7@0.030136,NHEK@0,NHLF@0.0083095,SKNSHRA@0.129727, 0 0 0 0 ENSG00000248743.1 ENST00000512032.1 chr10:15211104-15221737 2 2783 7848 intergenic 4.57 0 0,1,0 0 0,0,0 0 0 0 21.8914840100611 0 50.191 26.8713618397413 0 108.731 0 1 chimp,human,macaque,marmoset, lincRNA lincRNA A549@0.0035425,AG04450@0.0135485,BJ@0.001768,GM12878@0,H1HESC@0.0032665,HELAS3@0.0051515,HEPG2@0.0321425,HMEC@0,HSMM@0.020506,HUVEC@0.0187395,K562@0.013563,MCF7@0.001444,NHEK@0.002798,NHLF@0.0577175,SKNSHRA@0.0805935, 0 0 0 0 ENSG00000232739.1 ENST00000433455.1 chr10:15279491-15283766 2 792 3481 intronic 1.39 0 0,0,0 0 0,0,0 0 11.0953748922723 0 78.6161616161616 17.2002298190175 17.583 86.2171717171717 17.3731686297041 25.611 0 0 chimp,human,macaque,marmoset,orangutan, antisense antisense A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0.014894,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000226140.1 ENST00000434386.1 chr10:16320700-16331047 3 432 9911 intergenic 1.66 1 0,0,0 0 0,0,0 0 11.2016950862678 0 0 7.02673796791444 0 0 6.08929472303501 0 0 0 cat,chimp,dog,elephant,human,macaque,marmoset,orangutan,panda, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000226140.1 ENST00000417542.1 chr10:16320700-16337857 4 454 16697 intergenic -0.98 0 0,0,1 0 0,0,0 0 14.1450559980835 0 0 10.497813978559 0 0 9.76522728633886 0 0 0 cat,chimp,cow,dog,elephant,horse,human,macaque,marmoset,orangutan,panda, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000225213.1 ENST00000421480.1 chr10:16763436-16765207 2 402 1367 intronic -1.65 0 0,1,0 0 0,0,0 0 0 0 0 0 0 0 0 0 0 0 chimp,horse,human,macaque,marmoset,orangutan, antisense antisense A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000229124.1 ENST00000437232.1 chr10:17256238-17268897 4 1347 11306 exonic -1.88 1 0,0,1 0 0,0,0 1.78173719376392 18.7667610118521 12.648 10.9539717891611 12.4602865735008 51.35 11.4884929472903 12.9648859012913 61.615 0 0 chimp,cow,elephant,guinea_pig,horse,human,macaque,marmoset,orangutan,panda,pig,rabbit, antisense antisense A549@0.420647,AG04450@0.307611,BJ@0.325611,GM12878@2.76844,H1HESC@0.338799,HELAS3@0.687713,HEPG2@0.0518655,HMEC@0.70921,HSMM@0.342368,HUVEC@0.195491,K562@4.05732,MCF7@1.22837,NHEK@0.823788,NHLF@0.364403,SKNSHRA@0.279818, 0 0 0 0 ENSG00000234961.1 ENST00000456355.1 chr10:17275324-17276832 2 704 802 exonic 8.31 0 0,1,0 0 0,0,0 186 22.2942643391521 120.629 220.845170454545 29.5137157107232 137.32 243.214488636364 27.3316708229426 132.478 0 0 cat,chimp,cow,dog,elephant,guinea_pig,horse,human,macaque,marmoset,mouse,opossum,panda,pig,rabbit,rat, antisense antisense A549@0.188078,AG04450@0.419999,BJ@0.557601,GM12878@0.0195685,H1HESC@0.0042095,HELAS3@0,HEPG2@0.0077275,HMEC@0.078585,HSMM@0.095204,HUVEC@0.202436,K562@0.015169,MCF7@0,NHEK@0.0391223,NHLF@0.229266,SKNSHRA@0.042228, 0 0 0 0 ENSG00000204832.5 ENST00000457649.2 chr10:17428935-17450285 3 554 20792 intronic 5.33 1 1,1,1 0 0,0,0 0 4.12456714120816 0 0 6.03005963832243 0 0 6.57127741439015 0 0 0 cat,chimp,elephant,guinea_pig,horse,human,macaque,marmoset,mouse,orangutan,rabbit, antisense antisense A549@0,AG04450@0,BJ@0,GM12878@0.14057,H1HESC@0.001228,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0.0024365,HUVEC@0,K562@0.614461,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000204832.5 ENST00000377597.2 chr10:17428950-17452630 4 1807 21867 intronic 5.33 0 0,1,1 0 0,0,0 0 3.92179997256139 0 1.49474266740454 5.84291397996982 0 2.11455451023796 6.36667123976769 0 0 0 chimp,guinea_pig,human,macaque,marmoset,mouse,orangutan, antisense antisense A549@0,AG04450@0,BJ@0,GM12878@0.14057,H1HESC@0.001228,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0.0024365,HUVEC@0,K562@0.614461,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000204832.5 ENST00000451225.2 chr10:17428993-17450285 3 401 20887 intronic 5.33 1 1,1,1 0 0,0,0 0 4.1012912482066 0 0 5.9960306073649 0 0 6.53419416547107 0 0 0 chimp,guinea_pig,human,macaque,marmoset,orangutan, antisense antisense A549@0,AG04450@0,BJ@0,GM12878@0.14057,H1HESC@0.001228,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0.0024365,HUVEC@0,K562@0.614461,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000204832.5 ENST00000511755.2 chr10:17441101-17452630 3 1686 9839 intronic 5.33 0 0,0,1 0 0,0,0 0 0 0 1.60201660735469 0.242910864925297 3.24 2.26631079478055 0.263238133956703 5.766 1 1 chimp,human,macaque,marmoset,orangutan, antisense antisense A549@0,AG04450@0,BJ@0,GM12878@0.14057,H1HESC@0.001228,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0.0024365,HUVEC@0,K562@0.614461,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000204832.5 ENST00000451190.2 chr10:17450026-17455502 2 370 5104 intronic 5.33 0 0,0,1 0 0,0,0 52.9540540540541 3.2903605015674 0 48.7567567567568 20.3138714733542 0 53.3540540540541 20.5711206896552 0 0 0 cat,chimp,dog,horse,human,macaque,marmoset,mouse,orangutan,panda, antisense antisense A549@0,AG04450@0,BJ@0,GM12878@0.14057,H1HESC@0.001228,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0.0024365,HUVEC@0,K562@0.614461,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000229190.1 ENST00000445235.1 chr10:17737708-17742231 3 554 3965 exonic -1.72 0 0,1,0 0 0,0,0 28.2527075812274 12.2310214375788 16.38 44.4747292418773 15.6923076923077 29.796 50.0631768953069 19.2474148802018 33.54 0 0 chimp,cow,human,macaque,marmoset,orangutan, antisense antisense A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000235637.1 ENST00000442231.1 chr10:18151816-18154400 2 219 2363 intronic -2.95 0 0,0,0 0 0,0,0 0 16.1828184511215 0 0 34.8167583580195 0 0 35.5467625899281 0 0 0 cat,chimp,cow,dog,guinea_pig,horse,human,macaque,marmoset,orangutan,panda, antisense antisense A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000226083.1 ENST00000439319.1 chr10:18290715-18299491 5 1961 6807 exonic 3.94 0 0,0,1 0 0,0,0 13.1963284038756 1.35742617893345 0 33.1341152473228 18.9059791391215 4.944 48.1514533401326 19.2847069193477 6.517 0 0 chimp,elephant,horse,human,marmoset,orangutan,rabbit, antisense antisense A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0.014053,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000226083.1 ENST00000445287.1 chr10:18292033-18296199 4 1002 3158 exonic 1.12 0 0,0,0 0 0,0,0 25.8263473053892 2.92590246991767 0 63.2714570858283 25.205193160228 0 82.0988023952096 26.6827105763141 0 0 0 chimp,cow,dog,elephant,guinea_pig,horse,human,macaque,marmoset,orangutan,panda,pig,rabbit,rat, antisense antisense A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0.014053,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000235020.1 ENST00000457058.1 chr10:18523097-18550123 3 245 26777 exonic 0 0 0,0,0 0 0,0,0 54.4 6.63931732456959 162.328 68.6285714285714 8.20129215371401 127.18 87.0857142857143 9.74903835381111 133.681 0 0 cat,chimp,dog,elephant,guinea_pig,horse,human,macaque,marmoset,orangutan,pig,rabbit, antisense antisense A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000225527.1 ENST00000433526.1 chr10:18820778-18822265 2 411 1074 intronic 0.18 1 0,0,0 0 0,0,0 0 0 66.528 0 0 68.859 5.32116788321168 0 94.28 0 0 chimp,horse,human,macaque,marmoset,orangutan,panda, antisense antisense A549@0.014133,AG04450@0.0151895,BJ@0.0109005,GM12878@0.150513,H1HESC@0.151607,HELAS3@0.18299,HEPG2@0.124067,HMEC@0,HSMM@0,HUVEC@0.068669,K562@0.188933,MCF7@0.072524,NHEK@0.0367913,NHLF@0,SKNSHRA@0.144238, 0 0 0 0 ENSG00000240291.1 ENST00000436485.1 chr10:18830515-18833316 2 654 2145 exonic -19.27 0 0,1,0 0 0,0,0 0 62.2937062937063 0 6.91437308868502 60.362703962704 0 4.16360856269113 55.8727272727273 0 0 0 chimp,human,macaque,marmoset,orangutan, processed_transcript processed_transcript A549@1.27929,AG04450@0.274435,BJ@0.126288,GM12878@1.74853,H1HESC@0.463076,HELAS3@1.4653,HEPG2@2.92136,HMEC@0.173418,HSMM@0.155275,HUVEC@0.27299,K562@2.85589,MCF7@0.288183,NHEK@0.679574,NHLF@0.161691,SKNSHRA@0.838772, 1 96 0 0 ENSG00000246675.1 ENST00000499111.1 chr10:18941165-18943952 2 1613 1172 intergenic -0.34 0 0,0,0 0 0,0,0 4.22814631122133 0 0 0 0 6.716 0 0 9.415 1 1 chimp,human,macaque,marmoset,orangutan, lincRNA lincRNA A549@0.022241,AG04450@0.0092175,BJ@0.015995,GM12878@0.075264,H1HESC@0.0028165,HELAS3@0.0576525,HEPG2@0.0328175,HMEC@0,HSMM@0.003822,HUVEC@0.003011,K562@0.091082,MCF7@0.0563875,NHEK@0.0117243,NHLF@0.0024165,SKNSHRA@0.0217815, 0 0 0 0 ENSG00000152487.5 ENST00000449529.1 chr10:18943480-18948185 2 687 4016 intergenic 0 0 0,1,1 1 0,0,0 17.6128093158661 0 80.997 5.83406113537118 2.31548804780877 89.18 5.48762736535662 2.89591633466135 81.68 0 0 chimp,human,macaque,marmoset,orangutan, processed_transcript processed_transcript A549@2.04014,AG04450@1.18966,BJ@0.864519,GM12878@1.42199,H1HESC@0.345851,HELAS3@1.73258,HEPG2@1.5701,HMEC@0.799862,HSMM@0.389925,HUVEC@0.68036,K562@1.57178,MCF7@0.490401,NHEK@0.434979,NHLF@0.268081,SKNSHRA@1.96617, 0 0 0 0 ENSG00000152487.5 ENST00000444660.1 chr10:18943617-18948196 2 522 4055 intergenic 0 0 0,1,0 1 0,0,0 23.1800766283525 0 80.997 9.66091954022989 2.3672009864365 87.872 9.19348659003832 2.93662145499383 80.412 0 0 chimp,human,macaque,marmoset,mouse,orangutan, processed_transcript processed_transcript A549@2.04014,AG04450@1.18966,BJ@0.864519,GM12878@1.42199,H1HESC@0.345851,HELAS3@1.73258,HEPG2@1.5701,HMEC@0.799862,HSMM@0.389925,HUVEC@0.68036,K562@1.57178,MCF7@0.490401,NHEK@0.434979,NHLF@0.268081,SKNSHRA@1.96617, 0 0 0 0 ENSG00000152487.5 ENST00000414939.1 chr10:18943793-18948167 3 634 3736 intergenic 1.22 0 0,1,0 1 0,0,0 19.0851735015773 0 80.997 3.78548895899054 2.48902569593148 390.815 3.50788643533123 3.11295503211991 361.265 0 0 chimp,human,macaque,marmoset,orangutan,panda, processed_transcript processed_transcript A549@2.04014,AG04450@1.18966,BJ@0.864519,GM12878@1.42199,H1HESC@0.345851,HELAS3@1.73258,HEPG2@1.5701,HMEC@0.799862,HSMM@0.389925,HUVEC@0.68036,K562@1.57178,MCF7@0.490401,NHEK@0.434979,NHLF@0.268081,SKNSHRA@1.96617, 0 0 0 0 ENSG00000234244.1 ENST00000427232.1 chr10:19035362-19036782 2 546 872 intergenic -6.73 0 0,0,0 0 0,0,0 0 0 0 0 0 0 0 0 0 0 0 chimp,elephant,human, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0.0035605,SKNSHRA@0, 0 0 0 0 ENSG00000227734.1 ENST00000426818.1 chr10:19579152-19580409 2 301 954 intronic -10.83 0 0,0,0 0 0,0,0 0 0 0 0 0 0 0 2.29245283018868 0 0 0 chimp,horse,human,macaque,marmoset,orangutan, antisense antisense A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000233968.1 ENST00000451713.1 chr10:19999257-20017479 5 1399 16815 intronic 1.34 1 0,1,0 0 0,0,0 0 4.10371691941719 0 1.82273052180129 8.98965209634255 7.267 3.28377412437455 9.65536723163842 9.648 0 0 chimp,cow,elephant,human,macaque,marmoset,orangutan,pig,rabbit, antisense antisense A549@0,AG04450@0,BJ@0,GM12878@0.0028475,H1HESC@0.0230735,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0.036485,HUVEC@0.01248,K562@2.11151,MCF7@0,NHEK@0.00186467,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000233968.1 ENST00000431157.1 chr10:20010626-20017479 4 819 6028 intronic 5.85 0 1,1,1 0 0,0,0 0 0 0 0 3.72262773722628 7.267 0 4.21897810218978 9.648 0 0 chimp,cow,human,macaque,marmoset,orangutan,panda, antisense antisense A549@0,AG04450@0,BJ@0,GM12878@0.0028475,H1HESC@0.0230735,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0.036485,HUVEC@0.01248,K562@2.11151,MCF7@0,NHEK@0.00186467,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000233968.1 ENST00000423551.1 chr10:20010907-20017479 4 704 5862 intronic 5.85 0 0,1,0 0 0,0,0 0 0 0 0 3.82804503582395 7.267 0 4.33845104060048 9.648 0 0 chimp,human,macaque,marmoset,orangutan, antisense antisense A549@0,AG04450@0,BJ@0,GM12878@0.0028475,H1HESC@0.0230735,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0.036485,HUVEC@0.01248,K562@2.11151,MCF7@0,NHEK@0.00186467,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000238246.1 ENST00000451584.1 chr10:20359734-20380713 2 497 20480 intronic 0.65 0 0,1,0 0 0,0,0 0 7.597119140625 0 0 7.369384765625 0 0 9.9134765625 0 0 0 cat,chimp,cow,dog,elephant,guinea_pig,horse,human,marmoset,orangutan,panda,pig, antisense antisense A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000231920.1 ENST00000439097.1 chr10:21462943-21463977 2 659 373 exonic 0.68 0 0,1,0 0 0,0,0 0 0 72.912 47.0955993930197 225.817694369973 93.794 33.8285280728376 190.780160857909 87.63 0 0 cat,chimp,cow,dog,elephant,human,macaque,marmoset,mouse,orangutan,pig,rabbit,rat, antisense antisense A549@0.098018,AG04450@0,BJ@0,GM12878@0,H1HESC@0.051147,HELAS3@0,HEPG2@0,HMEC@0.012389,HSMM@0,HUVEC@0,K562@0,MCF7@0.0972275,NHEK@0.018085,NHLF@0,SKNSHRA@0.167355, 0 0 0 0 ENSG00000231920.1 ENST00000417845.1 chr10:21463283-21463852 2 460 107 intergenic 0.68 1 1,1,1 0 0,0,0 0 0 38.192 0.539130434782609 18.5420560747664 190.775 0.56304347826087 14.5233644859813 159.509 0 0 cat,chimp,cow,elephant,human,macaque,marmoset,orangutan,pig,rabbit, antisense antisense A549@0.098018,AG04450@0,BJ@0,GM12878@0,H1HESC@0.051147,HELAS3@0,HEPG2@0,HMEC@0.012389,HSMM@0,HUVEC@0,K562@0,MCF7@0.0972275,NHEK@0.018085,NHLF@0,SKNSHRA@0.167355, 0 0 0 0 ENSG00000230109.1 ENST00000433460.1 chr10:21629162-21661879 5 434 32275 intergenic 0 0 0,1,0 0 0,0,0 0 9.70590240123935 0 0 9.42261812548412 0 0 10.0437800154919 0 0 0 chimp,horse,human,macaque,marmoset,orangutan, lincRNA lincRNA A549@0.986545,AG04450@0.0293805,BJ@0,GM12878@0.0480545,H1HESC@0.0225465,HELAS3@0,HEPG2@0,HMEC@0.009327,HSMM@0,HUVEC@0.020337,K562@0,MCF7@0,NHEK@0.154898,NHLF@0.0177785,SKNSHRA@0.0216405, 0 0 0 0 ENSG00000233451.1 ENST00000422675.1 chr10:22650101-22701996 2 467 51426 intronic 0 0 0,0,1 0 0,0,0 0 26.3161824757904 0 4.50535331905782 22.0849764710458 7.93 4.65952890792291 28.8891805701396 11.783 0 0 cat,chimp,elephant,horse,human,macaque,marmoset,orangutan,panda,pig, processed_transcript processed_transcript A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000224215.1 ENST00000443224.1 chr10:23632886-23634110 2 890 332 exonic 1.60 0 0,0,0 0 0,0,0 0 0 0 12.9247191011236 0 2.907 12.8943820224719 0 2.889 0 0 cat,chimp,dog,horse,human,macaque,marmoset,orangutan,panda,pig, antisense antisense A549@0,AG04450@0.177936,BJ@0.086474,GM12878@0,H1HESC@0.039001,HELAS3@0,HEPG2@0,HMEC@0.018362,HSMM@0.045005,HUVEC@0.002726,K562@0,MCF7@0.0126615,NHEK@0.00286233,NHLF@0.028315,SKNSHRA@0.0812205, 0 0 0 0 ENSG00000228508.1 ENST00000413666.1 chr10:24536208-24540350 2 3414 726 intronic -1.74 0 0,0,0 0 0,0,0 3.46280023432923 0 0 4.24399531341535 0 4.541 4.69302870533099 0 9.295 0 0 chimp,human,macaque,orangutan, lincRNA processed_transcript A549@0,AG04450@0,BJ@0,GM12878@0.0025525,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0.155425,HSMM@0,HUVEC@0,K562@0,MCF7@0.0018055,NHEK@0.00114067,NHLF@0,SKNSHRA@0.004655, 0 0 0 0 ENSG00000235229.1 ENST00000445438.1 chr10:24604218-24621071 2 376 16475 intronic -6.93 0 0,0,0 0 0,0,0 0 2.59229135053111 0 0 6.47059180576631 0 0 12.6344157814871 0 0 0 chimp,horse,human,macaque,marmoset,orangutan, sense_intronic sense_intronic A549@0,AG04450@0.011482,BJ@0,GM12878@0.0100185,H1HESC@0.165548,HELAS3@0.041213,HEPG2@0.073371,HMEC@0,HSMM@0,HUVEC@0.139319,K562@0,MCF7@0,NHEK@0.151362,NHLF@0,SKNSHRA@0.008055, 0 0 0 0 ENSG00000231422.1 ENST00000436140.1 chr10:25401987-25406286 3 786 3509 intergenic -1.89 0 0,0,0 0 0,0,0 0 0 0 4.58015267175572 0.565403248788829 3.036 5.02290076335878 0.992305500142491 3.124 0 0 chimp,dog,human,macaque,marmoset,orangutan,pig, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000233642.1 ENST00000449643.1 chr10:25447001-25465205 2 2431 15771 exonic 20.50 0 0,0,0 0 0,0,0 129.483340189223 18.1614989537759 29.432 174.54627725216 22.6884154460719 35.903 148.873303167421 22.1515439731152 27.519 0 0 chimp,dog,horse,human,macaque,marmoset,orangutan, lincRNA processed_transcript A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0.0027225,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0.0031315,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0.0009325, 0 0 0 0 ENSG00000228690.1 ENST00000450270.1 chr10:25940704-25971574 4 437 30427 intergenic 2.79 0 0,0,0 0 0,0,0 66.0503432494279 0.691228185493148 0 25.7940503432494 3.72080717783548 0 42.8535469107551 4.50688533210635 0 0 0 cat,chimp,dog,elephant,horse,human,macaque,marmoset,orangutan,panda,pig, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000226304.1 ENST00000452911.1 chr10:26213377-26222639 4 477 8779 intergenic -3.94 0 0,0,0 0 0,0,0 0 0 0 0 0.209591069597904 0 0 0.489121767855109 1.554 0 0 chimp,dog,horse,human,macaque,marmoset,orangutan,panda,rabbit, antisense antisense A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000246873.1 ENST00000500857.1 chr10:26853755-26855838 2 1796 285 intronic 1.61 0 0,0,0 0 0,0,0 0 0 0 0 19.8947368421053 27.804 0 20.0421052631579 58.438 0 1 chimp,human,macaque, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0.0088615,H1HESC@0,HELAS3@0.017713,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000236894.1 ENST00000455612.1 chr10:26866605-26868024 2 430 987 intergenic -4.09 0 0,0,0 0 0,0,0 0 0 0 33.0697674418605 0 0 65.4441860465116 0.238095238095238 0 0 0 chimp,cow,dog,horse,human,macaque,marmoset,opossum,orangutan,rabbit, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000236894.1 ENST00000449071.1 chr10:26866605-26868236 3 419 1208 intergenic -1.91 0 0,0,0 0 0,0,0 0 0 0 33.9379474940334 0 0 67.1622911694511 0.19453642384106 0 0 0 chimp,cow,dog,horse,human,macaque,marmoset,orangutan,rabbit, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000233261.1 ENST00000412114.1 chr10:26878794-26883253 4 1081 3372 intergenic 8.95 1 0,0,0 0 0,0,0 0.425531914893617 6.68446026097272 0 11.3561517113784 0 0 12.8889916743756 0.662811387900356 0 0 0 cat,chimp,horse,human,macaque,marmoset,orangutan, lincRNA lincRNA A549@0,AG04450@0,BJ@0.0193675,GM12878@0.0110585,H1HESC@0.0083855,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0.013582,MCF7@0,NHEK@0.00365033,NHLF@0.0035965,SKNSHRA@0.0083645, 0 0 0 0 ENSG00000231976.3 ENST00000544033.1 chr10:26932098-26942377 5 6032 4239 intergenic 12.85 1 0,0,1 1 0,0,0 0 0 0 1.26724137931034 0 0 1.65765915119363 0 0 1 1 chimp,human,macaque,marmoset,orangutan, lincRNA lincRNA A549@0.0102615,AG04450@0,BJ@0.001778,GM12878@0.0083085,H1HESC@0.0247265,HELAS3@0.0006915,HEPG2@0.000846,HMEC@0.001357,HSMM@0,HUVEC@0.000403,K562@0.0137885,MCF7@0,NHEK@0.0387713,NHLF@0.0110275,SKNSHRA@2.39506, 0 0 0 0 ENSG00000234296.1 ENST00000454991.1 chr10:26932157-26933945 2 470 1316 intergenic 3.83 0 0,0,0 1 0,0,0 0 0 0 0 0 0 0 0 0 0 0 chimp,human,macaque,marmoset,orangutan, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000231976.3 ENST00000423917.1 chr10:26936915-26942375 5 1215 4237 intergenic 12.85 1 0,0,1 0 0,0,0 0 0 0 6.29135802469136 0 0 8.22962962962963 0 0 0 0 chimp,human,macaque,marmoset,orangutan, lincRNA lincRNA A549@0.0102615,AG04450@0,BJ@0.001778,GM12878@0.0083085,H1HESC@0.0247265,HELAS3@0.0006915,HEPG2@0.000846,HMEC@0.001357,HSMM@0,HUVEC@0.000403,K562@0.0137885,MCF7@0,NHEK@0.0387713,NHLF@0.0110275,SKNSHRA@2.39506, 0 0 0 0 ENSG00000231976.3 ENST00000434458.1 chr10:26937029-26942383 4 876 4472 intergenic 12.85 1 0,0,1 0 0,0,0 0 0 0 8.72602739726027 0 0 10.2682648401826 0.168381037567084 0 0 0 chimp,human,macaque,marmoset,orangutan, lincRNA lincRNA A549@0.0102615,AG04450@0,BJ@0.001778,GM12878@0.0083085,H1HESC@0.0247265,HELAS3@0.0006915,HEPG2@0.000846,HMEC@0.001357,HSMM@0,HUVEC@0.000403,K562@0.0137885,MCF7@0,NHEK@0.0387713,NHLF@0.0110275,SKNSHRA@2.39506, 0 0 0 0 ENSG00000231976.3 ENST00000413288.1 chr10:26938261-26942040 3 410 3365 intergenic 0.18 0 0,1,1 0 0,0,0 0 0 0 18.6439024390244 0 0 21.9390243902439 0.223774145616642 0 0 0 chimp,human,macaque,marmoset,orangutan, lincRNA lincRNA A549@0.0102615,AG04450@0,BJ@0.001778,GM12878@0.0083085,H1HESC@0.0247265,HELAS3@0.0006915,HEPG2@0.000846,HMEC@0.001357,HSMM@0,HUVEC@0.000403,K562@0.0137885,MCF7@0,NHEK@0.0387713,NHLF@0.0110275,SKNSHRA@2.39506, 0 0 0 0 ENSG00000227932.1 ENST00000446557.1 chr10:26953135-26965088 3 316 11633 intergenic 6.20 0 0,0,1 0 0,0,0 33.746835443038 1.69027765838563 0.744 134.727848101266 4.38442362245337 6.232 205.848101265823 5.44047107366973 6.756 0 0 chimp,cow,elephant,horse,human,macaque,marmoset,opossum,orangutan,panda,platypus,rabbit, antisense antisense A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0.100453,K562@8.07404,MCF7@0,NHEK@0.0289703,NHLF@0,SKNSHRA@0.0382375, 0 0 0 0 ENSG00000235843.1 ENST00000458171.1 chr10:27006564-27007707 2 483 658 intronic 0 0 0,0,1 0 0,0,0 0 0 0 0 0 0 2.14492753623188 0 0 0 0 chimp,dog,elephant,guinea_pig,horse,human,macaque,marmoset,mouse,opossum,orangutan,pig,platypus,rabbit, antisense antisense A549@0.0047475,AG04450@0.005939,BJ@0,GM12878@0.0212725,H1HESC@0.0084665,HELAS3@0.068364,HEPG2@0.030803,HMEC@2.43759,HSMM@0,HUVEC@0.0024905,K562@0.0433675,MCF7@0.0121445,NHEK@0.0283277,NHLF@0.0065,SKNSHRA@0.0045545, 0 0 0 0 ENSG00000232224.1 ENST00000458682.1 chr10:27220135-27223852 2 866 2849 intergenic 4.56 1 0,0,1 0 0,0,0 0 0 0 0 0 0 4.770207852194 0 0 0 0 chimp,cow,dog,human,macaque,marmoset,orangutan, lincRNA lincRNA A549@0.365488,AG04450@0.0067165,BJ@0.0087355,GM12878@0.219104,H1HESC@0.0726055,HELAS3@0.126484,HEPG2@0.0861875,HMEC@0.058197,HSMM@0.007298,HUVEC@0.127342,K562@0.0063015,MCF7@0.0190555,NHEK@0.963003,NHLF@0.0072805,SKNSHRA@0.0486505, 0 0 0 0 ENSG00000232224.1 ENST00000458084.1 chr10:27220135-27226788 4 1783 4864 intergenic 10.74 1 0,1,1 0 0,0,0 0 0 0 0 0 0 2.31688166012339 0 0 0 0 chimp,human,macaque,marmoset,orangutan, lincRNA lincRNA A549@0.365488,AG04450@0.0067165,BJ@0.0087355,GM12878@0.219104,H1HESC@0.0726055,HELAS3@0.126484,HEPG2@0.0861875,HMEC@0.058197,HSMM@0.007298,HUVEC@0.127342,K562@0.0063015,MCF7@0.0190555,NHEK@0.963003,NHLF@0.0072805,SKNSHRA@0.0486505, 0 0 0 0 ENSG00000232224.1 ENST00000431296.1 chr10:27220135-27230930 5 3615 7172 intergenic 17.74 1 0,0,1 0 0,0,0 0 0 0 0 0 0 1.14273858921162 0 0 0 0 chimp,human,macaque,marmoset,orangutan, lincRNA non_coding A549@0.365488,AG04450@0.0067165,BJ@0.0087355,GM12878@0.219104,H1HESC@0.0726055,HELAS3@0.126484,HEPG2@0.0861875,HMEC@0.058197,HSMM@0.007298,HUVEC@0.127342,K562@0.0063015,MCF7@0.0190555,NHEK@0.963003,NHLF@0.0072805,SKNSHRA@0.0486505, 0 0 0 0 ENSG00000236983.1 ENST00000433966.1 chr10:27232252-27233347 2 643 450 intergenic -0.14 0 0,0,0 0 0,0,0 0 0 0 0 0 0 0 0 0 0 0 chimp,cow,human,macaque,marmoset,mouse,orangutan, lincRNA lincRNA A549@0.367327,AG04450@0.0091795,BJ@0.0112555,GM12878@0.170016,H1HESC@0.041989,HELAS3@0.124716,HEPG2@0.281122,HMEC@0.03809,HSMM@0.220425,HUVEC@0.004614,K562@0.0107995,MCF7@0.0998485,NHEK@1.08571,NHLF@0.0029915,SKNSHRA@0.174773, 0 0 0 0 ENSG00000230500.1 ENST00000419777.1 chr10:28033715-28056723 2 598 22408 intronic 2.63 0 0,1,0 0 0,0,0 0 13.4353355944306 0 4.63210702341137 11.347643698679 8.094 4.68896321070234 15.4344876829704 8.223 0 0 chimp,dog,human,macaque,orangutan,panda, antisense antisense A549@0,AG04450@0,BJ@1.73929,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0.462269,NHEK@0,NHLF@0.0258715,SKNSHRA@0, 0 0 0 0 ENSG00000230500.1 ENST00000412244.1 chr10:28050518-28056722 3 742 5458 intergenic 2.63 0 0,0,0 0 0,0,0 0 2.86551850494687 0 0 2.62641993404177 1.736 0 1.77116159765482 1.813 0 0 chimp,human,macaque,marmoset,orangutan,panda, antisense antisense A549@0,AG04450@0,BJ@1.73929,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0.462269,NHEK@0,NHLF@0.0258715,SKNSHRA@0, 0 0 0 0 ENSG00000233472.1 ENST00000425137.1 chr10:28288717-28338544 4 465 49356 intergenic 2.95 0 0,0,0 0 0,0,0 0 11.9399059891401 0 0 12.8348123834995 0 0 13.3420860685631 0 0 0 chimp,cow,dog,elephant,horse,human,macaque,marmoset,orangutan,panda, processed_transcript processed_transcript A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000237128.1 ENST00000421132.1 chr10:28721937-28784742 3 270 62531 intergenic 4.15 1 0,0,0 0 0,0,0 0 1.91917608866002 0 0 3.2419919719819 1.912 235.537037037037 13.8744142905119 2.008 0 0 chimp,cow,dog,horse,human,marmoset,orangutan, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000254635.1 ENST00000527986.1 chr10:28811581-28821672 3 2320 7767 exonic -3.67 0 1,1,1 1 0,0,0 0 0 228.403 5.77241379310345 0.728080339899575 289.194 7.36810344827586 1.15758980301275 287.54 1 1 chimp,human,macaque,marmoset,orangutan, antisense antisense A549@1.74602,AG04450@2.16998,BJ@2.48555,GM12878@1.57334,H1HESC@1.04704,HELAS3@1.21945,HEPG2@0.904375,HMEC@1.88744,HSMM@2.24259,HUVEC@0.905307,K562@1.42223,MCF7@4.16367,NHEK@1.67282,NHLF@3.2007,SKNSHRA@2.3331, 0 0 0 0 ENSG00000254635.1 ENST00000528337.1 chr10:28811614-28821283 3 2605 7060 intergenic -0.04 0 0,0,1 0 0,0,0 0 0 148.335 5.14088291746641 0.800991501416431 128.145 6.56199616122841 1.27351274787535 108.43 0 1 chimp,human,marmoset, antisense antisense A549@1.74602,AG04450@2.16998,BJ@2.48555,GM12878@1.57334,H1HESC@1.04704,HELAS3@1.21945,HEPG2@0.904375,HMEC@1.88744,HSMM@2.24259,HUVEC@0.905307,K562@1.42223,MCF7@4.16367,NHEK@1.67282,NHLF@3.2007,SKNSHRA@2.3331, 0 0 0 0 ENSG00000236716.1 ENST00000456082.1 chr10:29032674-29033592 2 515 401 intergenic 1.32 0 0,0,1 0 0,0,0 0 0 0 2.88932038834951 20.9875311720698 0 2.92427184466019 21.7057356608479 0 0 0 chimp,human,macaque,orangutan,pig, lincRNA lincRNA A549@0.016794,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0.010267,HEPG2@0.0168335,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000235824.1 ENST00000443246.1 chr10:29078117-29084902 2 3956 2827 intergenic 5.98 1 0,0,0 0 0,0,0 22.1739130434783 0 0 38.1208291203236 0 0 45.146865520728 0 0 0 0 chimp,human,marmoset,orangutan, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0.0006705,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0.040645,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0.0006795, 0 0 0 0 ENSG00000235824.1 ENST00000446012.1 chr10:29081498-29085042 2 594 2948 intergenic 2.07 0 0,0,0 0 0,0,0 0 0 0 0 0 0 0 0 0 0 0 cat,chimp,human,macaque,marmoset,orangutan, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0.0006705,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0.040645,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0.0006795, 0 0 0 0 ENSG00000232624.1 ENST00000426922.1 chr10:29095876-29097148 2 404 866 intergenic -2.92 1 0,0,0 0 0,0,0 88.1658415841584 74.9399538106236 88.853 54.3960396039604 92.0242494226328 50.812 72.7450495049505 114.825635103926 47.58 0 0 cat,chimp,cow,dog,elephant,guinea_pig,horse,human,macaque,marmoset,orangutan,panda,pig,platypus, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0.109793,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000224597.3 ENST00000430295.1 chr10:29698331-29747329 3 437 48557 exonic 0 0 0,0,0 1 0,0,0 0 4.9987643388183 0 78.908466819222 4.92287414790864 0 146.933638443936 6.86177070247338 0 0 0 cat,chimp,human,macaque,marmoset,orangutan,rabbit,rat, antisense antisense A549@14.4663,AG04450@22.2985,BJ@21.121,GM12878@0.834372,H1HESC@0.01036,HELAS3@12.0802,HEPG2@16.0104,HMEC@14.9211,HSMM@14.2675,HUVEC@19.1856,K562@7.37327,MCF7@7.02199,NHEK@18.637,NHLF@17.8805,SKNSHRA@11.3712, 0 0 0 0 ENSG00000224597.3 ENST00000413405.1 chr10:29698468-29776674 3 764 77438 exonic 11.84 0 0,1,0 1 0,0,0 67.8324607329843 10.3979312482244 0 82.0497382198953 13.3491825718639 0 147.446335078534 17.4669412949715 0 0 0 cat,chimp,dog,human,macaque,mouse,orangutan,panda,rabbit, antisense antisense A549@14.4663,AG04450@22.2985,BJ@21.121,GM12878@0.834372,H1HESC@0.01036,HELAS3@12.0802,HEPG2@16.0104,HMEC@14.9211,HSMM@14.2675,HUVEC@19.1856,K562@7.37327,MCF7@7.02199,NHEK@18.637,NHLF@17.8805,SKNSHRA@11.3712, 0 0 0 0 ENSG00000224597.3 ENST00000438399.1 chr10:29698476-29713107 4 3303 11322 intergenic 6.23 1 1,1,1 1 0,0,0 0 0 0 6.20435967302452 1.5975975975976 0 16.9146230699364 4.81372549019608 0 0 0 chimp,human,orangutan, antisense antisense A549@14.4663,AG04450@22.2985,BJ@21.121,GM12878@0.834372,H1HESC@0.01036,HELAS3@12.0802,HEPG2@16.0104,HMEC@14.9211,HSMM@14.2675,HUVEC@19.1856,K562@7.37327,MCF7@7.02199,NHEK@18.637,NHLF@17.8805,SKNSHRA@11.3712, 0 0 0 0 ENSG00000224597.3 ENST00000537908.1 chr10:29698486-29711238 3 1999 10749 intergenic 6.23 1 1,1,1 1 0,0,0 0 0 0 8.88694347173587 1.68276118708717 0 26.5232616308154 5.0703321239185 0 1 1 chimp,human,macaque,marmoset,orangutan, antisense antisense A549@14.4663,AG04450@22.2985,BJ@21.121,GM12878@0.834372,H1HESC@0.01036,HELAS3@12.0802,HEPG2@16.0104,HMEC@14.9211,HSMM@14.2675,HUVEC@19.1856,K562@7.37327,MCF7@7.02199,NHEK@18.637,NHLF@17.8805,SKNSHRA@11.3712, 0 0 0 0 ENSG00000224597.3 ENST00000414457.1 chr10:29698487-29772847 3 1240 73116 intronic 9.48 1 1,1,1 1 0,0,0 0 8.41733683461896 0 14.3266129032258 11.6420482520926 0 34.9959677419355 15.243339351168 0 0 0 chimp,dog,horse,human,macaque,marmoset,orangutan, antisense antisense A549@14.4663,AG04450@22.2985,BJ@21.121,GM12878@0.834372,H1HESC@0.01036,HELAS3@12.0802,HEPG2@16.0104,HMEC@14.9211,HSMM@14.2675,HUVEC@19.1856,K562@7.37327,MCF7@7.02199,NHEK@18.637,NHLF@17.8805,SKNSHRA@11.3712, 0 0 0 0 ENSG00000224597.3 ENST00000427063.2 chr10:29698501-29711301 3 2022 10774 intergenic 8.97 1 1,1,1 1 0,0,0 0 0 0 8.78585558852621 1.67885650640431 0 21.4614243323442 5.95192129199926 0 0 0 chimp,human,macaque,marmoset,orangutan, antisense antisense A549@14.4663,AG04450@22.2985,BJ@21.121,GM12878@0.834372,H1HESC@0.01036,HELAS3@12.0802,HEPG2@16.0104,HMEC@14.9211,HSMM@14.2675,HUVEC@19.1856,K562@7.37327,MCF7@7.02199,NHEK@18.637,NHLF@17.8805,SKNSHRA@11.3712, 0 0 0 0 ENSG00000224597.3 ENST00000446807.1 chr10:29698509-29772361 4 1003 72843 exonic 2.47 0 0,1,0 1 0,0,0 9.15653040877368 8.31886385788614 0 52.6729810568295 11.193059044795 0 107.321036889332 14.404307895062 0 0 0 chimp,dog,horse,human,macaque,marmoset,orangutan,panda, antisense antisense A549@14.4663,AG04450@22.2985,BJ@21.121,GM12878@0.834372,H1HESC@0.01036,HELAS3@12.0802,HEPG2@16.0104,HMEC@14.9211,HSMM@14.2675,HUVEC@19.1856,K562@7.37327,MCF7@7.02199,NHEK@18.637,NHLF@17.8805,SKNSHRA@11.3712, 0 0 0 0 ENSG00000224597.3 ENST00000423223.1 chr10:29698515-29772114 3 504 73091 intronic 2.47 0 1,1,1 1 0,0,0 0 8.42021589525386 0 35.2480158730159 11.6460302910071 0 105.198412698413 15.1168680138458 0 0 0 cat,chimp,guinea_pig,horse,human,macaque,marmoset,mouse,orangutan,pig,rabbit,rat, antisense antisense A549@14.4663,AG04450@22.2985,BJ@21.121,GM12878@0.834372,H1HESC@0.01036,HELAS3@12.0802,HEPG2@16.0104,HMEC@14.9211,HSMM@14.2675,HUVEC@19.1856,K562@7.37327,MCF7@7.02199,NHEK@18.637,NHLF@17.8805,SKNSHRA@11.3712, 0 0 0 0 ENSG00000224597.3 ENST00000445521.1 chr10:29698520-29756207 3 185 57498 intronic 0 0 0,1,0 1 0,0,0 0 6.1417266687537 0 96.027027027027 8.13656127169641 0 286.594594594595 10.8313158718564 0 0 0 cat,chimp,cow,dog,elephant,guinea_pig,human,macaque,marmoset,mouse,opossum,orangutan,panda,pig,platypus,rabbit,rat, antisense antisense A549@14.4663,AG04450@22.2985,BJ@21.121,GM12878@0.834372,H1HESC@0.01036,HELAS3@12.0802,HEPG2@16.0104,HMEC@14.9211,HSMM@14.2675,HUVEC@19.1856,K562@7.37327,MCF7@7.02199,NHEK@18.637,NHLF@17.8805,SKNSHRA@11.3712, 0 0 0 0 ENSG00000224597.3 ENST00000438202.1 chr10:29698531-29747716 3 649 48532 exonic 0 0 0,1,1 1 0,0,0 42.0107858243451 5.00133932250886 0 119.423728813559 4.92541003873733 0 218.476117103236 6.66698260941235 0 0 0 chimp,dog,horse,human,macaque,marmoset,orangutan,pig,platypus, antisense antisense A549@14.4663,AG04450@22.2985,BJ@21.121,GM12878@0.834372,H1HESC@0.01036,HELAS3@12.0802,HEPG2@16.0104,HMEC@14.9211,HSMM@14.2675,HUVEC@19.1856,K562@7.37327,MCF7@7.02199,NHEK@18.637,NHLF@17.8805,SKNSHRA@11.3712, 0 0 0 0 ENSG00000224597.3 ENST00000455774.1 chr10:29699172-29758051 3 475 58400 intronic -0.79 1 0,0,1 0 0,0,0 0 6.2126198630137 0 37.4 8.7397602739726 0 50.8315789473684 11.6547773972603 33.88 0 0 cat,chimp,cow,elephant,horse,human,macaque,marmoset,orangutan,pig, antisense antisense A549@14.4663,AG04450@22.2985,BJ@21.121,GM12878@0.834372,H1HESC@0.01036,HELAS3@12.0802,HEPG2@16.0104,HMEC@14.9211,HSMM@14.2675,HUVEC@19.1856,K562@7.37327,MCF7@7.02199,NHEK@18.637,NHLF@17.8805,SKNSHRA@11.3712, 0 0 0 0 ENSG00000227955.1 ENST00000411802.1 chr10:30569015-30569839 2 512 310 intergenic 0 0 0,0,0 0 0,0,0 0 0 0 0 0 0 0 0 0 0 0 chimp,human,macaque,marmoset,orangutan, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0.00256867,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000228800.1 ENST00000440932.1 chr10:30842783-30843412 2 539 88 intergenic 3.84 0 0,0,0 0 0,0,0 0 0 0 0 0 9.9 2.32838589981447 0 10.197 0 0 chimp,elephant,human,macaque,marmoset,orangutan, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0.120046,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0.0151145,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000230298.1 ENST00000426067.1 chr10:30865628-30869111 2 376 3105 intergenic -9.39 0 0,0,0 0 0,0,0 0 0 0 0 0 0 0 0 0 0 0 chimp,human,macaque,orangutan, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000236181.1 ENST00000423173.1 chr10:30918477-30918992 2 349 164 exonic 0.93 1 0,0,0 0 0,0,0 0 0 0 0 10.8841463414634 0 0 11.3109756097561 0 0 0 cat,chimp,horse,human,macaque,marmoset,orangutan,panda,pig, antisense antisense A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000230998.1 ENST00000450581.1 chr10:30944418-30946464 3 483 1559 intergenic -1.52 0 0,0,1 0 0,0,0 0 0 0 95.5238095238095 9.00577293136626 27.46 188.265010351967 20.8422065426555 88.644 0 0 cat,chimp,dog,guinea_pig,horse,human,macaque,marmoset,mouse,opossum,orangutan,pig, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0.00400867,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000230720.1 ENST00000416310.1 chr10:31012180-31012669 2 406 81 intergenic -2.26 1 0,0,0 0 0,0,0 0 0 0 0 0 0 0 0 0 0 0 cat,chimp,dog,elephant,horse,human,macaque,orangutan,panda, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000237036.2 ENST00000450834.1 chr10:31596658-31607964 2 562 10742 exonic 1.09 1 1,1,1 1 0,0,0 69.0106761565836 14.3442561906535 363.334 30.3185053380783 3.74595047477192 281.11 27.9501779359431 5.71662632656861 335.019 0 0 chimp,dog,elephant,horse,human,macaque,marmoset,orangutan, lincRNA processed_transcript A549@0.263124,AG04450@0.553179,BJ@0.510027,GM12878@1.17841,H1HESC@0.215789,HELAS3@0.862869,HEPG2@0.689099,HMEC@0.076993,HSMM@0.474736,HUVEC@0.698258,K562@0.482212,MCF7@0.288207,NHEK@0.263161,NHLF@0.305227,SKNSHRA@0.900313, 0 0 0 0 ENSG00000237036.2 ENST00000424191.1 chr10:31596922-31607861 3 317 10618 exonic -6.11 0 1,1,1 1 0,0,0 0 14.5117724618572 393.294 3.91167192429022 3.78969674138256 275.48 1.67192429022082 5.78338670182709 333.595 0 0 chimp,human,macaque,marmoset,orangutan, lincRNA processed_transcript A549@0.263124,AG04450@0.553179,BJ@0.510027,GM12878@1.17841,H1HESC@0.215789,HELAS3@0.862869,HEPG2@0.689099,HMEC@0.076993,HSMM@0.474736,HUVEC@0.698258,K562@0.482212,MCF7@0.288207,NHEK@0.263161,NHLF@0.305227,SKNSHRA@0.900313, 0 0 0 0 ENSG00000237036.2 ENST00000441257.1 chr10:31607017-31607956 2 583 354 exonic -1.56 0 1,1,1 1 0,0,0 110.078902229846 0 368.182 51.0720411663808 8.4180790960452 282.544 48.2898799313894 4.49152542372881 337.309 0 0 chimp,cow,elephant,horse,human,macaque,marmoset,orangutan,panda,pig,rat, lincRNA processed_transcript A549@0.263124,AG04450@0.553179,BJ@0.510027,GM12878@1.17841,H1HESC@0.215789,HELAS3@0.862869,HEPG2@0.689099,HMEC@0.076993,HSMM@0.474736,HUVEC@0.698258,K562@0.482212,MCF7@0.288207,NHEK@0.263161,NHLF@0.305227,SKNSHRA@0.900313, 0 0 0 0 ENSG00000237036.2 ENST00000423714.1 chr10:31607381-31608810 2 454 973 intronic 6.38 0 0,1,1 0 0,0,0 143.237885462555 338.189105858171 122.629 109.185022026432 241.632065775951 105.522 126.751101321586 290.742034943474 90.021 0 0 cat,chimp,dog,human,macaque,marmoset,mouse,orangutan,pig,platypus,rat, lincRNA processed_transcript A549@0.263124,AG04450@0.553179,BJ@0.510027,GM12878@1.17841,H1HESC@0.215789,HELAS3@0.862869,HEPG2@0.689099,HMEC@0.076993,HSMM@0.474736,HUVEC@0.698258,K562@0.482212,MCF7@0.288207,NHEK@0.263161,NHLF@0.305227,SKNSHRA@0.900313, 0 0 0 0 ENSG00000223834.2 ENST00000420945.1 chr10:31893528-31895146 2 419 1197 intergenic -3.62 1 0,0,1 0 0,0,0 0 0 51.324 0 4.49206349206349 80.92 0 4.68253968253968 90.808 0 0 chimp,human,macaque,marmoset,orangutan, lincRNA lincRNA A549@0.023434,AG04450@0,BJ@0.0307465,GM12878@0.019153,H1HESC@0.010805,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0.0288695,NHEK@0,NHLF@0,SKNSHRA@0.0343435, 0 0 0 0 ENSG00000237797.1 ENST00000433770.1 chr10:31982012-31996316 2 345 13957 intergenic 3.35 0 1,1,1 0 0,0,0 0 30.1133481407179 138.285 0 21.0263666977144 125.931 0 22.3031453750806 132.169 0 0 chimp,human,macaque,marmoset,orangutan, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0.0700785,HUVEC@0.0413125,K562@0,MCF7@0,NHEK@0,NHLF@0.022492,SKNSHRA@0, 0 0 0 0 ENSG00000227253.1 ENST00000415731.1 chr10:32555217-32558039 2 331 2489 exonic 2.55 0 0,0,0 0 0,0,0 426.344410876133 324.525512253917 0 428.595166163142 365.729208517477 0 465.045317220544 375.093210124548 0 0 0 guinea_pig,human,macaque,marmoset, antisense antisense A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0.013691,HUVEC@0,K562@0,MCF7@0,NHEK@0.0237877,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000226842.1 ENST00000419441.1 chr10:32570614-32571757 2 464 677 intronic -3.65 0 0,0,1 0 0,0,0 0 0 8.778 0 0 0 0 0 1.701 0 0 cat,chimp,human,macaque,marmoset,orangutan,panda,rabbit, antisense antisense A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0.0127545,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000233825.1 ENST00000412085.1 chr10:32635427-32636107 2 381 297 exonic 3.39 0 1,1,1 0 0,0,0 669 669 152.674 686.721784776903 601.383838383838 112.296 728.464566929134 650.13468013468 113.858 0 0 cat,chimp,cow,dog,elephant,human,macaque,mouse,opossum,orangutan,panda,platypus,rabbit,rat, antisense antisense A549@0.0507315,AG04450@0.0231885,BJ@0.037968,GM12878@0.106278,H1HESC@0.0373375,HELAS3@0.288141,HEPG2@0.203207,HMEC@0,HSMM@0.0107445,HUVEC@0.0697325,K562@0,MCF7@0.039439,NHEK@0.0189183,NHLF@0.0304315,SKNSHRA@0.0859365, 0 0 0 0 ENSG00000229327.1 ENST00000417447.1 chr10:32636325-32663416 2 263 26826 intronic -3.67 1 0,1,1 0 0,0,0 0 1.74014016252889 590.727 0 2.44986207410721 586.727 0 9.17154998881682 621.433 0 0 cat,chimp,horse,human,macaque,marmoset,orangutan,panda,rabbit, antisense antisense A549@0.0254535,AG04450@0,BJ@0,GM12878@0.0176905,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000229656.2 ENST00000450890.1 chr10:33247773-33371030 4 1044 122207 intronic 4.70 1 0,0,1 0 0,0,0 0 8.83077074144689 0 3.90804597701149 10.2564910357017 5.7 7.4272030651341 17.5077859697071 23.37 0 0 cat,chimp,elephant,human,macaque,marmoset,orangutan, lincRNA lincRNA A549@10.8877,AG04450@0.153772,BJ@0.101551,GM12878@0.0019235,H1HESC@0.002377,HELAS3@0.567516,HEPG2@0.169698,HMEC@0.409069,HSMM@0.098052,HUVEC@0.076847,K562@0.00459,MCF7@0.0195755,NHEK@2.07243,NHLF@0.270149,SKNSHRA@0.262688, 0 0 0 0 ENSG00000229656.2 ENST00000414157.1 chr10:33271469-33371030 3 1038 98519 intronic 4.70 1 1,1,1 0 0,0,0 0 9.90414031811123 7.7 3.93063583815029 10.911935768735 28.803 7.47013487475915 19.7874318659345 26.24 0 0 cat,chimp,elephant,human,macaque,marmoset,orangutan, lincRNA lincRNA A549@10.8877,AG04450@0.153772,BJ@0.101551,GM12878@0.0019235,H1HESC@0.002377,HELAS3@0.567516,HEPG2@0.169698,HMEC@0.409069,HSMM@0.098052,HUVEC@0.076847,K562@0.00459,MCF7@0.0195755,NHEK@2.07243,NHLF@0.270149,SKNSHRA@0.262688, 0 0 0 0 ENSG00000233387.1 ENST00000414308.1 chr10:33385185-33405600 2 550 19863 intergenic 2.61 0 0,0,0 0 0,0,0 0 23.4396616825253 24.38 4.34545454545455 21.2351608518351 4.621 22.0509090909091 23.5499672758395 8.095 0 0 cat,chimp,cow,dog,guinea_pig,horse,human,macaque,orangutan,panda, lincRNA lincRNA A549@0,AG04450@0.0042665,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0.0074495,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000238258.1 ENST00000451530.1 chr10:33500205-33502732 2 779 1746 exonic 6.64 0 0,1,1 0 0,0,0 153.894736842105 0 159.527 170.869062901155 0 15.95 203.084724005135 2.58190148911798 21.492 0 0 cat,chimp,cow,dog,elephant,guinea_pig,horse,human,macaque,marmoset,orangutan,panda,platypus, antisense antisense A549@0.981761,AG04450@0.766231,BJ@1.12656,GM12878@0.044631,H1HESC@0,HELAS3@0.005985,HEPG2@0.0381925,HMEC@0,HSMM@0,HUVEC@0.322518,K562@0,MCF7@0.0051485,NHEK@0.016513,NHLF@0.0535655,SKNSHRA@1.80053, 0 0 0 0 ENSG00000228832.1 ENST00000443179.1 chr10:33608520-33609590 2 409 659 intronic 2.57 0 0,0,1 0 0,0,0 0 0 0 0 0 0 0 0 0 0 0 chimp,elephant,guinea_pig,horse,human,macaque,marmoset,orangutan,panda,pig, antisense antisense A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0.039821,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000226412.1 ENST00000457848.1 chr10:33867859-33888968 4 858 20245 intergenic -3.09 0 0,0,0 0 0,0,0 0 15.7645838478637 0 0 15.2745863176093 0 1.98251748251748 18.9779698691035 0 0 0 chimp,dog,horse,human,macaque,orangutan,panda,pig, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0.0033925,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000203565.2 ENST00000366376.2 chr10:33973683-33975992 2 450 1857 intergenic -2.36 0 0,0,1 0 0,0,0 0 8.94776521270867 0 0 5.10823909531502 0 0 10.248788368336 0 0 0 chimp,human,macaque,marmoset,orangutan, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0.011816,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 1 96 0 0 ENSG00000223470.1 ENST00000434552.1 chr10:34198166-34206732 5 626 7932 intergenic -1.64 1 0,0,1 0 0,0,0 0 15.3967473524962 0 11.0830670926518 22.7740796772567 0 10.2316293929712 22.0980837115482 0 0 0 chimp,human,macaque,marmoset,orangutan, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000226386.1 ENST00000446211.1 chr10:35104695-35105314 2 300 317 intergenic 4.50 0 0,0,1 0 0,0,0 0 0 111.28 0 25.4731861198738 175.121 2.51 26.4984227129338 163.728 0 0 chimp,elephant,horse,human,macaque,marmoset,orangutan,panda, antisense antisense A549@0.268526,AG04450@0.023395,BJ@0.0808265,GM12878@0.035548,H1HESC@0.108089,HELAS3@0.29454,HEPG2@0.550589,HMEC@0.027117,HSMM@0,HUVEC@0.0474685,K562@0.133657,MCF7@0.108176,NHEK@0.100402,NHLF@0.0256285,SKNSHRA@0.576639, 0 0 0 0 ENSG00000230534.1 ENST00000450742.1 chr10:35386934-35415585 5 564 28079 intergenic 2.01 0 0,1,0 0 0,0,0 0 0 0 18.2358156028369 1.52711991167777 64.737 24.0177304964539 2.41329819438014 95.133 0 0 chimp,human,macaque,marmoset,orangutan, antisense antisense A549@0,AG04450@0,BJ@0,GM12878@0.018003,H1HESC@0.0031865,HELAS3@0.0107705,HEPG2@0,HMEC@0,HSMM@0.0031605,HUVEC@0,K562@0,MCF7@0.0280745,NHEK@0,NHLF@0.002997,SKNSHRA@0.0217155, 0 0 0 0 ENSG00000230534.1 ENST00000423819.1 chr10:35386955-35389990 2 313 2720 intergenic 1.19 1 0,0,1 0 0,0,0 0 0 0 8.96166134185304 4.74375 0 9.31309904153355 4.95367647058824 0 0 0 chimp,human,macaque,marmoset,orangutan,panda, antisense antisense A549@0,AG04450@0,BJ@0,GM12878@0.018003,H1HESC@0.0031865,HELAS3@0.0107705,HEPG2@0,HMEC@0,HSMM@0.0031605,HUVEC@0,K562@0,MCF7@0.0280745,NHEK@0,NHLF@0.002997,SKNSHRA@0.0217155, 0 0 0 0 ENSG00000230534.1 ENST00000457255.1 chr10:35389818-35415948 4 517 25607 exonic -6.51 0 0,0,0 0 0,0,0 0 0 0 67.2359767891683 1.29999609481782 34.144 83.2998065764023 2.40360057796696 55.438 0 0 cat,chimp,cow,human,macaque,marmoset, antisense antisense A549@0,AG04450@0,BJ@0,GM12878@0.018003,H1HESC@0.0031865,HELAS3@0.0107705,HEPG2@0,HMEC@0,HSMM@0.0031605,HUVEC@0,K562@0,MCF7@0.0280745,NHEK@0,NHLF@0.002997,SKNSHRA@0.0217155, 0 0 0 0 ENSG00000230534.1 ENST00000450106.1 chr10:35407111-35415588 2 649 7826 intergenic 0.78 0 0,1,0 0 0,0,0 0 0 0 0 2.55238947099412 64.737 9.73497688751926 4.35100945566062 94.861 0 0 chimp,dog,horse,human,macaque,marmoset,orangutan,panda, antisense antisense A549@0,AG04450@0,BJ@0,GM12878@0.018003,H1HESC@0.0031865,HELAS3@0.0107705,HEPG2@0,HMEC@0,HSMM@0.0031605,HUVEC@0,K562@0,MCF7@0.0280745,NHEK@0,NHLF@0.002997,SKNSHRA@0.0217155, 0 0 0 0 ENSG00000233200.1 ENST00000439198.1 chr10:35508822-35519526 2 378 10324 intergenic 8.00 0 0,1,1 0 0,0,0 0 0.596667958155754 0 0 0.564994188299109 0 0 2.79368461836497 0 0 0 cat,chimp,elephant,human,macaque,marmoset,orangutan,panda, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000227313.1 ENST00000442783.1 chr10:36185802-36187891 2 866 1221 intergenic 3.20 0 0,0,0 0 0,0,0 51.8013856812933 0.900900900900901 0 37.7147806004619 3.14004914004914 17.959 72.5600461893765 3.2964782964783 47.722 0 0 cat,chimp,horse,human,macaque,marmoset,mouse,orangutan,panda, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0.004645,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0.0030845,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000227475.1 ENST00000412439.1 chr10:36378014-36378317 2 185 116 intergenic 0 0 0,0,0 0 0,0,0 0 0 54.44 0 0 36.865 0 0 43.583 0 0 chimp,horse,human,macaque,marmoset,orangutan,panda, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000237002.1 ENST00000426283.1 chr10:36727544-36728725 2 396 783 intergenic -4.97 0 0,0,0 0 0,0,0 0 0 0 0 0 0 0 0 0 0 0 chimp,human,macaque,marmoset,orangutan, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000237002.1 ENST00000418875.1 chr10:36727544-36731320 3 318 3454 intergenic 0.04 0 0,0,0 0 0,0,0 0 0 0 0 4.22814128546613 0 0 4.35437174290677 0 0 0 chimp,guinea_pig,horse,human,macaque,marmoset,orangutan,panda, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000238176.1 ENST00000457804.1 chr10:37229037-37232860 2 291 3530 intergenic -7.15 0 0,0,0 0 0,0,0 0 0 0 0 28.9770538243626 0 355.773195876289 44.4968838526912 0 0 0 cat,chimp,cow,dog,elephant,horse,human,macaque,marmoset,mouse,orangutan,panda,pig,rabbit, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000234918.1 ENST00000436077.1 chr10:37529815-37530977 3 332 826 intergenic -0.10 0 0,0,0 0 0,0,0 0 0 0 0 0 3.962 0 0 4.046 0 0 chimp,elephant,human,macaque,marmoset,orangutan, lincRNA lincRNA A549@0.569112,AG04450@0,BJ@0,GM12878@0.823101,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0.0219945,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000235687.2 ENST00000426471.1 chr10:37598113-37635954 5 647 37186 intergenic -1.22 1 0,0,0 0 0,0,0 0 1.56510514709837 0 30.6970633693972 29.8913569622976 21.815 38.2952086553323 40.2998978110041 29.602 0 0 cat,chimp,cow,dog,guinea_pig,horse,human,macaque,marmoset,orangutan,rabbit, processed_transcript processed_transcript A549@0.840498,AG04450@0,BJ@0,GM12878@0.427732,H1HESC@0,HELAS3@0.0160135,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0.016659,MCF7@0.0129585,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000235687.2 ENST00000435629.1 chr10:37600084-37635838 5 420 35326 intergenic -1.22 1 0,0,0 0 0,0,0 0 1.64751174772123 0 46.5738095238095 30.8510728641794 20.315 58.1333333333333 41.6830096812546 23.208 0 0 cat,chimp,guinea_pig,horse,human,macaque,marmoset,orangutan, processed_transcript processed_transcript A549@0.840498,AG04450@0,BJ@0,GM12878@0.427732,H1HESC@0,HELAS3@0.0160135,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0.016659,MCF7@0.0129585,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000235687.2 ENST00000442439.1 chr10:37604195-37635957 4 494 31262 intergenic -1.22 1 0,0,0 0 0,0,0 0 1.86168511291664 0 31.004048582996 33.9363124560169 14.433 32.5364372469636 45.8997504958096 19.467 0 0 cat,chimp,horse,human,macaque,marmoset,orangutan, processed_transcript processed_transcript A549@0.840498,AG04450@0,BJ@0,GM12878@0.427732,H1HESC@0,HELAS3@0.0160135,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0.016659,MCF7@0.0129585,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000226578.1 ENST00000432530.1 chr10:38064299-38073059 3 709 8047 intergenic -5.61 0 0,1,1 0 0,0,0 0 0 0 0 1.01702497825276 0 0 1.84727227538213 8.262 0 0 human,macaque,marmoset,orangutan, lincRNA lincRNA A549@0.191405,AG04450@0.047622,BJ@0.039592,GM12878@0.095064,H1HESC@0,HELAS3@0.391988,HEPG2@1.41896,HMEC@0.040256,HSMM@0.0564665,HUVEC@0.05839,K562@0.0982455,MCF7@0.0028875,NHEK@0.0775333,NHLF@0.051642,SKNSHRA@0.108208, 0 0 0 0 ENSG00000236514.1 ENST00000429214.1 chr10:38146668-38148038 2 824 544 exonic -1.96 0 0,1,0 0 0,0,0 0 0 25.443 13.0388349514563 0 19.228 12.9757281553398 0 19.211 0 0 cat,chimp,cow,horse,human,macaque,marmoset,orangutan,panda, antisense antisense A549@0.116088,AG04450@0.0962485,BJ@0.0674125,GM12878@0.189655,H1HESC@0,HELAS3@0.265744,HEPG2@0.113874,HMEC@0.044615,HSMM@0.0265225,HUVEC@0.0319945,K562@0.189973,MCF7@0.282978,NHEK@0.170655,NHLF@0.0516015,SKNSHRA@0.246524, 0 0 0 0 ENSG00000226447.1 ENST00000412789.1 chr10:38265753-38281395 3 441 15197 intergenic 1.18 0 0,0,0 0 0,0,0 0 0 0 0 0 9.974 0 0 10.156 0 0 chimp,human,macaque,orangutan, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0.0262255,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0.0052295,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000241125.1 ENST00000419779.1 chr10:38453576-38466958 3 425 12953 intergenic 1.12 0 0,0,1 0 0,0,0 0 0 0 79.3717647058824 4.98795645796341 0 88.8517647058824 5.11588049100594 0 0 0 chimp,dog,elephant,horse,human,macaque,orangutan,pig, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000224761.2 ENST00000423162.1 chr10:38464596-38501285 7 783 35894 intergenic -4.42 0 0,0,1 0 0,0,0 0 0 0 331.735632183908 11.8779461748482 0 389.919540229885 16.8261269292918 0 0 0 chimp,cow,dog,guinea_pig,horse,human,macaque,marmoset,orangutan,pig,rabbit,rat, processed_transcript processed_transcript A549@0,AG04450@0.002837,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0.006778,MCF7@0,NHEK@0.0573247,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000226113.1 ENST00000450980.1 chr10:38536850-38622083 3 422 84807 intergenic 2.52 0 0,0,0 0 0,0,0 0 2.30302923107762 0 568.919431279621 7.40911717193156 1.611 595.537914691943 9.85832537408469 1.869 0 0 cat,chimp,cow,dog,elephant,guinea_pig,horse,human,macaque,marmoset,mouse,opossum,orangutan,panda,pig,platypus,rabbit,rat, lincRNA lincRNA A549@0.029712,AG04450@0,BJ@0,GM12878@0,H1HESC@0.143718,HELAS3@0,HEPG2@0.0051195,HMEC@0.202323,HSMM@0.009683,HUVEC@0.0070025,K562@0.035627,MCF7@0,NHEK@0.284449,NHLF@0,SKNSHRA@0.0767745, 0 0 0 0 ENSG00000225119.2 ENST00000423687.1 chr10:38717074-38736820 8 984 18748 intergenic 3.31 0 0,0,0 0 0,1,0 0 0 0 0 0 0 23.780487804878 22.5673671858332 0 1 1 chimp,human,macaque,marmoset,orangutan, processed_transcript processed_transcript A549@0.9589,AG04450@0.42892,BJ@0.592098,GM12878@0.867313,H1HESC@0.801018,HELAS3@0.665879,HEPG2@1.11994,HMEC@0.461119,HSMM@0.450064,HUVEC@0.632264,K562@1.55907,MCF7@2.01457,NHEK@0.673057,NHLF@0.581152,SKNSHRA@1.44935, 98 2 0 0 ENSG00000203496.3 ENST00000428915.1 chr10:38742109-38755311 3 931 12267 intergenic 1.09 0 0,0,0 0 0,0,0 0 0 0 0 3.23290127985653 0 141.473684210526 155.097660389663 0 0 0 chimp,elephant,guinea_pig,human,orangutan,rabbit,rat, lincRNA lincRNA A549@0.076573,AG04450@0.032697,BJ@0.037403,GM12878@0.187892,H1HESC@0,HELAS3@0.063841,HEPG2@0.0706295,HMEC@0.013152,HSMM@0.0046435,HUVEC@0.0317535,K562@0.146387,MCF7@0.098103,NHEK@0.052358,NHLF@0.0041315,SKNSHRA@0.0670495, 5 7 2 7 ENSG00000233867.1 ENST00000452667.1 chr10:38933913-38982200 9 1515 46756 intergenic 0.18 0 0,0,0 0 0,0,0 0 0 0 159.415841584158 2.06694328000684 3.419 251.516831683168 10.2726494995295 3.952 0 0 chimp,cow,dog,elephant,guinea_pig,horse,human,macaque,marmoset,mouse,opossum,orangutan,panda,pig,rabbit,rat, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0.0180795,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0.0042055,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0.0014915, 0 0 0 0 ENSG00000233867.1 ENST00000431389.1 chr10:38934082-38943409 3 386 8937 intergenic 0.18 0 0,0,0 0 0,0,0 0 0 0 199.00518134715 7.69553541456865 15.233 265.582901554404 16.8477117600985 36.929 0 0 chimp,cow,dog,guinea_pig,horse,human,macaque,marmoset,mouse,opossum,orangutan,panda,pig,rabbit,rat, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0.0180795,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0.0042055,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0.0014915, 0 0 0 0 ENSG00000233867.1 ENST00000416231.1 chr10:38937626-38982200 10 1329 43227 intergenic 0.61 0 0,0,0 0 0,0,0 0 0 0 147.006772009029 2.02049644897865 3.419 241.833709556057 10.7353737247554 3.952 0 0 chimp,human,macaque,marmoset,mouse,orangutan,pig,rat, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0.0180795,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0.0042055,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0.0014915, 0 0 0 0 ENSG00000234541.1 ENST00000423877.1 chr10:39006326-39012607 3 490 5787 intergenic 1.78 0 0,0,0 0 0,0,0 0 0 0 75.2387755102041 28.5695524451356 21.843 76.6857142857143 29.6341800587524 23.161 0 0 cat,chimp,cow,dog,guinea_pig,horse,human,macaque,marmoset,mouse,orangutan,panda,rabbit,rat, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000234541.1 ENST00000456744.1 chr10:39010984-39012507 2 500 1021 intergenic 1.78 0 0,0,0 0 0,0,0 0 0 0 16.98 0 0 16.762 0 0 0 0 cat,chimp,cow,dog,elephant,horse,human,macaque,orangutan,panda, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000185904.6 ENST00000332123.5 chr10:42970991-42990784 5 2259 17526 intergenic 13.24 1 0,1,0 0 0,1,0 0 0 0 0 0 0 0 0 0 0 1 human,macaque,orangutan, lincRNA processed_transcript A549@0.010001,AG04450@0.553913,BJ@2.52689,GM12878@0.108702,H1HESC@0,HELAS3@0.0226365,HEPG2@0.028673,HMEC@2.34835,HSMM@0.187794,HUVEC@0.720529,K562@1.33236,MCF7@0.017121,NHEK@0.380838,NHLF@0.429789,SKNSHRA@4.91941, 0 0 0 0 ENSG00000185904.6 ENST00000429940.2 chr10:42970991-42990784 5 2248 17537 intergenic 13.24 1 0,1,0 0 0,1,0 0 0 0 0 0 0 0 0 0 0 1 human,macaque,orangutan, lincRNA processed_transcript A549@0.010001,AG04450@0.553913,BJ@2.52689,GM12878@0.108702,H1HESC@0,HELAS3@0.0226365,HEPG2@0.028673,HMEC@2.34835,HSMM@0.187794,HUVEC@0.720529,K562@1.33236,MCF7@0.017121,NHEK@0.380838,NHLF@0.429789,SKNSHRA@4.91941, 0 0 0 0 ENSG00000185904.6 ENST00000424751.1 chr10:42971076-42990784 5 2258 17442 intergenic 14.29 1 0,1,0 0 0,1,0 0 0 0 0 0 0 0 0 0 0 1 human,macaque,orangutan, lincRNA processed_transcript A549@0.010001,AG04450@0.553913,BJ@2.52689,GM12878@0.108702,H1HESC@0,HELAS3@0.0226365,HEPG2@0.028673,HMEC@2.34835,HSMM@0.187794,HUVEC@0.720529,K562@1.33236,MCF7@0.017121,NHEK@0.380838,NHLF@0.429789,SKNSHRA@4.91941, 0 0 0 0 ENSG00000233515.1 ENST00000411439.1 chr10:43169645-43187171 4 515 17005 intergenic 9.36 0 1,1,1 0 0,0,0 0 0 0 0 0 0 0 0 0 0 0 chimp,cow,dog,horse,human,macaque,marmoset,orangutan,pig,rat, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0.256267,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@5.40249, 0 0 0 0 ENSG00000234864.1 ENST00000439913.1 chr10:43191483-43201901 3 3962 6452 intergenic 2.59 0 0,0,0 0 0,0,0 0 0 0 22.9787985865724 4.19172349659021 44.982 58.7980817768804 11.0029448233106 71.25 0 0 chimp,human,macaque,orangutan, lincRNA lincRNA A549@0,AG04450@0.0016265,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0.001501,K562@0,MCF7@0,NHEK@0.000666,NHLF@0,SKNSHRA@0.0014025, 0 0 0 0 ENSG00000234944.1 ENST00000421320.1 chr10:43366969-43369508 2 1712 825 intergenic 2.68 1 0,1,0 1 0,0,0 5.94567757009346 0 17.901 11.3060747663551 18.9806060606061 33.276 12.3966121495327 21.2509090909091 24.076 0 0 cat,chimp,human,macaque,marmoset,orangutan,panda, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0.0069855,HELAS3@0,HEPG2@0.0099445,HMEC@0,HSMM@0.0392915,HUVEC@0,K562@0,MCF7@0.0585995,NHEK@0,NHLF@0,SKNSHRA@2.84354, 0 0 0 0 ENSG00000229630.1 ENST00000431395.1 chr10:43474465-43476955 3 497 1989 intergenic -0.23 0 0,0,0 0 0,0,0 0 72.238310708899 10.58 0 68.5022624434389 19.396 0 79.7400703871292 21.283 0 0 horse,human,macaque,marmoset,orangutan,panda, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0.307094,NHEK@0,NHLF@0,SKNSHRA@2.12111, 0 0 0 0 ENSG00000224265.1 ENST00000451438.1 chr10:43819113-43823380 3 388 3875 intergenic -0.34 0 0,0,0 0 0,0,0 0 0 0 0 0 0 0 0 0 0 0 chimp,human,macaque,orangutan, lincRNA lincRNA A549@0.030145,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000230555.1 ENST00000442526.1 chr10:43916047-43917254 3 300 903 intergenic 0 0 0,1,0 1 0,0,0 0 0 0 0 0 0 0 0 0 0 0 dog,human,macaque,marmoset,orangutan, lincRNA lincRNA A549@0.234847,AG04450@0.120075,BJ@0.398454,GM12878@0.069779,H1HESC@0.19825,HELAS3@0.251901,HEPG2@0.260508,HMEC@0.013514,HSMM@0.16185,HUVEC@0.0419205,K562@0.0881235,MCF7@0.466346,NHEK@0.0386087,NHLF@0.089725,SKNSHRA@0.137638, 0 0 0 0 ENSG00000223910.1 ENST00000458063.1 chr10:44124265-44170151 5 1927 43951 encompassing 2.66 1 0,1,0 0 0,0,0 0 16.3584901367432 0 4.20653866113129 17.2594935268822 0 4.24390243902439 26.0213647015995 0 0 0 chimp,cow,human,macaque,orangutan, processed_transcript processed_transcript A549@0.00084,AG04450@0,BJ@0.003249,GM12878@0,H1HESC@0.010775,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0.0260405,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0.007189, 0 0 0 0 ENSG00000237389.1 ENST00000431956.1 chr10:44126330-44127012 2 409 271 intergenic -0.81 0 0,0,1 0 0,0,0 0 0 14.96 91.7946210268949 260.439114391144 0 412.38141809291 727 0 0 0 cat,chimp,cow,dog,elephant,guinea_pig,horse,human,macaque,marmoset,mouse,orangutan,panda,pig,rabbit,rat, lincRNA lincRNA A549@0,AG04450@0,BJ@0.00599,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0.0110505, 0 0 0 0 ENSG00000226245.1 ENST00000453284.1 chr10:44139320-44140495 2 432 741 exonic 0 0 0,1,0 0 0,0,0 116.268518518519 632.097165991903 4.62 121.296296296296 611.098515519568 2.652 128.152777777778 492.290148448043 8.372 0 0 chimp,cow,dog,elephant,horse,human,macaque,marmoset,mouse,orangutan,panda,pig, antisense antisense A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0.0068625, 0 0 0 0 ENSG00000230565.1 ENST00000418966.1 chr10:44141390-44143467 3 902 1171 exonic -1.80 0 0,0,1 0 0,0,0 73.4467849223947 0 8.58 78.7926829268293 0 2.264 81.719512195122 0 3.567 0 0 chimp,cow,dog,guinea_pig,horse,human,macaque,mouse,orangutan,panda, antisense antisense A549@0.018723,AG04450@0.0123225,BJ@0,GM12878@0.10713,H1HESC@0.040621,HELAS3@0.0393275,HEPG2@0.011871,HMEC@0.004524,HSMM@0.0209525,HUVEC@0,K562@0.127546,MCF7@0.013329,NHEK@0.015141,NHLF@0.004264,SKNSHRA@0.0596225, 0 0 0 0 ENSG00000228426.1 ENST00000418426.1 chr10:44161116-44162453 2 460 875 intergenic -15.30 0 0,0,0 0 0,0,0 0 0 0 0 0 0 0 0 0 0 0 chimp,dog,human,macaque,marmoset,orangutan, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000234973.1 ENST00000423349.1 chr10:44273010-44274074 2 332 730 intergenic 2.71 0 0,0,0 0 0,0,0 0 0 0 0 0 0 0 0 0 0 0 chimp,human,marmoset,orangutan, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000234973.1 ENST00000419406.1 chr10:44273010-44274273 2 406 855 intergenic 2.71 0 0,0,0 0 0,0,0 0 0 0 0 0 0 0 0 0 0 0 chimp,human,marmoset,orangutan, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000226808.1 ENST00000431737.1 chr10:44354859-44390881 5 1969 34045 intergenic -1.36 0 0,0,0 0 0,0,0 0 12.735379644588 0 0 11.6259656337201 5.245 0 13.3178146570715 5.515 0 0 chimp,human,macaque,marmoset,orangutan, lincRNA lincRNA A549@0,AG04450@0.026327,BJ@0.07472,GM12878@0.001021,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0.010393,HUVEC@0.32093,K562@0,MCF7@0.0010415,NHEK@0,NHLF@0.017693,SKNSHRA@0, 0 0 0 0 ENSG00000236769.1 ENST00000438454.1 chr10:44396813-44407774 2 491 10468 intergenic -2.31 0 0,0,0 0 0,0,0 0 9.32260221627818 0 0 18.7948032097822 0 0 20.5279900649599 0 0 0 cat,chimp,cow,dog,human,macaque,marmoset,orangutan,panda,pig, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000227029.1 ENST00000446107.1 chr10:44407892-44409684 2 511 1279 intergenic 1.18 0 0,0,0 0 0,0,0 0 0 0 0 0 0 3.43835616438356 0 0 0 0 cat,chimp,cow,dog,elephant,horse,human,macaque,marmoset,orangutan,panda,rabbit, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0.004008,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000223992.1 ENST00000431987.1 chr10:44409347-44409954 2 463 142 intergenic -0.08 0 0,0,0 0 0,0,0 0 0 0 0 0 0 3.79481641468682 0 0 0 0 cat,chimp,dog,horse,human,macaque,marmoset,orangutan,panda,pig, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000233395.1 ENST00000451929.1 chr10:44434451-44439914 5 2121 3334 intergenic 4.17 0 0,0,0 0 0,0,0 18.5785007072136 2.000599880024 0 4.11834040546912 1.82123575284943 0 6.9014615747289 1.87402519496101 0 0 0 chimp,human,macaque,marmoset,orangutan, lincRNA lincRNA A549@0,AG04450@0,BJ@0.0030445,GM12878@0.002751,H1HESC@0,HELAS3@0.0049935,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0.0100485,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000237590.1 ENST00000437014.1 chr10:44755050-44757261 2 839 1370 intergenic 3.84 0 0,1,0 1 0,0,0 13.1108462455304 0 0 6.0834326579261 10.0613138686131 0 13.3206197854589 12.4175182481752 0 0 0 chimp,human,macaque,orangutan, lincRNA lincRNA A549@0.0131375,AG04450@0.013731,BJ@0.0710705,GM12878@3.45634,H1HESC@0,HELAS3@0,HEPG2@0.0206965,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0.0114715,SKNSHRA@0.011792, 0 0 0 0 ENSG00000229116.1 ENST00000452578.1 chr10:44787706-44789157 2 913 536 exonic 5.39 0 0,1,0 0 0,0,0 0 0 15.62 0 0 19.363 0 0 20.703 0 0 chimp,human,macaque,marmoset,orangutan, antisense antisense A549@0,AG04450@0.22407,BJ@0.128694,GM12878@0.065255,H1HESC@0.834597,HELAS3@0,HEPG2@0.030904,HMEC@0,HSMM@0.0377545,HUVEC@0,K562@0,MCF7@0.057416,NHEK@0,NHLF@0.348994,SKNSHRA@0.004959, 0 0 0 0 ENSG00000234580.1 ENST00000456722.1 chr10:45086656-45097552 2 730 10164 intergenic -0.49 1 0,0,1 0 0,0,0 0 0 0 12.3479452054795 0.787977174340811 0 12.4958904109589 0.814344746162928 0 0 0 chimp,human,macaque,marmoset,panda, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0.005493,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000224812.1 ENST00000450287.1 chr10:45306472-45455137 8 3294 145357 intronic 0.43 0 0,1,0 1 0,0,0 1.27504553734062 3.57030621160316 0 2.27959927140255 5.47857344331542 4.482 1.59927140255009 5.86961068266406 4.485 0 0 chimp,human,macaque,marmoset,orangutan, lincRNA processed_transcript A549@0.00188,AG04450@0.01371,BJ@0.0115505,GM12878@0.0229415,H1HESC@0.043401,HELAS3@0.005736,HEPG2@0.0348195,HMEC@0,HSMM@0.042845,HUVEC@0.009628,K562@0,MCF7@0.0059605,NHEK@0.000386667,NHLF@0.0017665,SKNSHRA@0.0048135, 0 0 0 0 ENSG00000234504.1 ENST00000436877.1 chr10:45395062-45415668 3 1441 19161 intronic 5.01 0 0,0,0 0 0,0,0 0 4.62888158238088 0 0 8.35212149679035 0 0 7.84478889410782 0 0 0 chimp,human,macaque,marmoset,orangutan, antisense antisense A549@0,AG04450@0.0104535,BJ@0.0103575,GM12878@0.034249,H1HESC@0.0383475,HELAS3@0.0157895,HEPG2@0.01654,HMEC@0,HSMM@0,HUVEC@0.0168625,K562@0,MCF7@0.0677765,NHEK@0.00638667,NHLF@0,SKNSHRA@0.0075135, 0 0 0 0 ENSG00000223462.1 ENST00000425541.1 chr10:45432956-45451173 2 427 17788 intergenic -4.13 0 0,0,0 0 0,0,0 0 1.87598380930965 0 0 1.82904205082078 0 0 2.15774679559253 0 0 0 chimp,dog,human,marmoset,orangutan, antisense antisense A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000226937.1 ENST00000456938.1 chr10:45497679-45567036 7 2456 66889 exonic 4.32 1 0,0,0 0 0,0,0 125.380700325733 0.900835712897487 0 127.953990228013 1.8827460419501 0 84.9568403908795 8.71506525736668 0 0 0 cat,chimp,cow,dog,elephant,guinea_pig,horse,human,macaque,opossum,orangutan,panda,pig,rabbit, processed_transcript processed_transcript A549@0.0008815,AG04450@0.000956,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0.001419,K562@0.003934,MCF7@0.000835,NHEK@0,NHLF@0,SKNSHRA@0.0018455, 0 0 0 0 ENSG00000232554.2 ENST00000423875.1 chr10:45595614-45603436 2 1705 6115 intergenic -4.83 0 0,0,0 0 0,0,0 0 0 0 176.266275659824 1.72902698282911 15.011 243.214076246334 1.49877350776778 64.254 0 0 chimp,dog,horse,human,macaque,marmoset,opossum,orangutan,panda,rabbit, processed_transcript processed_transcript A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0.020346,K562@0,MCF7@0,NHEK@0.00151233,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000232554.2 ENST00000450224.1 chr10:45595644-45643340 7 866 46818 intergenic 0.15 0 0,1,0 0 0,0,0 0 0 0 158.994226327945 20.6659404502542 43.671 241.678983833718 33.3033875859712 67.088 0 0 cat,chimp,cow,human,macaque,marmoset,opossum,orangutan, processed_transcript processed_transcript A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0.020346,K562@0,MCF7@0,NHEK@0.00151233,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000232554.2 ENST00000448600.1 chr10:45595703-45602526 3 439 6380 intergenic 0 0 0,0,0 0 0,0,0 0 0 0 213.813211845103 12.8528213166144 133.712 290.872437357631 20.5421630094044 146.1 0 0 chimp,dog,horse,human,macaque,marmoset,opossum,orangutan,panda,rabbit, processed_transcript processed_transcript A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0.020346,K562@0,MCF7@0,NHEK@0.00151233,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000243349.1 ENST00000427229.1 chr10:45642842-45645173 5 624 1699 intergenic -4.20 0 0,0,0 0 0,0,0 0 0 0 92.4407051282051 13.372572101236 5.704 172.049679487179 23.4620364920541 6.256 0 0 chimp,cow,dog,elephant,horse,human,macaque,marmoset,mouse,orangutan,panda,pig,rabbit, processed_transcript processed_transcript A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000227683.1 ENST00000422807.1 chr10:45659676-45676875 2 533 16664 intergenic 1.00 0 0,0,0 0 0,0,0 0 0 0 0 0 0 254.31894934334 29.7666226596255 142.821 0 0 chimp,human,macaque,marmoset,mouse,orangutan,panda,platypus,rabbit,rat, lincRNA lincRNA A549@0,AG04450@0,BJ@0.004602,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0.053575,HSMM@0,HUVEC@0.741985,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000231964.1 ENST00000435635.1 chr10:45940018-45948569 3 459 8088 intronic -0.94 0 0,1,1 0 0,0,0 0 29.6209198813056 0 0 9.36844708209694 0 0 12.1833580613254 0 0 0 chimp,horse,human,orangutan, antisense antisense A549@0.057237,AG04450@0.125012,BJ@0.005329,GM12878@0.0344865,H1HESC@0.037929,HELAS3@0.235988,HEPG2@0.134502,HMEC@0,HSMM@0,HUVEC@0.0117045,K562@0.092347,MCF7@0,NHEK@0.0506013,NHLF@0,SKNSHRA@0.17957, 0 0 0 0 ENSG00000231122.2 ENST00000411791.2 chr10:46310876-46312772 2 320 1574 intergenic 17.87 0 0,0,1 0 0,0,0 0 0 0 0 0 0 240.675 27.6747141041931 134.068 0 0 cat,chimp,cow,elephant,horse,human,macaque,marmoset,opossum,orangutan,panda,pig,rabbit,rat, lincRNA lincRNA A549@0,AG04450@0.0219415,BJ@0.015292,GM12878@0.0072795,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0.0083145,MCF7@0.0653805,NHEK@0.0246003,NHLF@0,SKNSHRA@0.076869, 191 2 123 2 ENSG00000239883.2 ENST00000440803.1 chr10:46349534-46387931 5 792 37597 intergenic 3.82 0 0,1,0 0 0,0,0 0 4.25220097348193 0 126.352272727273 13.9650504029577 9.35 152.526515151515 77.4262308162885 12.67 0 0 chimp,human,macaque,marmoset,orangutan, processed_transcript processed_transcript A549@1.5675,AG04450@2.55276,BJ@2.26439,GM12878@5.98626,H1HESC@5.80278,HELAS3@3.45314,HEPG2@5.68304,HMEC@0.740133,HSMM@1.25238,HUVEC@1.97245,K562@9.61321,MCF7@2.26274,NHEK@4.64475,NHLF@0.682176,SKNSHRA@7.39628, 111 2 63 2 ENSG00000239883.2 ENST00000435772.2 chr10:46358510-46411606 7 649 52435 intergenic -0.35 0 0,0,0 0 0,0,0 0 3.04891770763803 0 474.138674884438 21.8943835224564 27.529 530.317411402157 71.2104319633832 34.834 0 0 chimp,cow,dog,elephant,guinea_pig,horse,human,macaque,marmoset,mouse,opossum,orangutan,panda,pig,rabbit,rat, processed_transcript processed_transcript A549@1.5675,AG04450@2.55276,BJ@2.26439,GM12878@5.98626,H1HESC@5.80278,HELAS3@3.45314,HEPG2@5.68304,HMEC@0.740133,HSMM@1.25238,HUVEC@1.97245,K562@9.61321,MCF7@2.26274,NHEK@4.64475,NHLF@0.682176,SKNSHRA@7.39628, 109 2 62 2 ENSG00000241338.1 ENST00000421313.1 chr10:46780490-46790500 2 357 9651 intergenic -11.04 0 0,0,0 0 0,0,0 0 0 0 0 0 34.526 157.848739495798 4.72448450937727 231.514 0 0 chimp,human,macaque,orangutan, processed_transcript processed_transcript A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000230761.1 ENST00000453853.1 chr10:46798370-46809021 3 706 9941 intergenic 5.71 1 0,0,0 0 0,0,0 0 0 0 0 0 0 0 4.19947691379137 0 0 0 chimp,human,marmoset,orangutan, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0.170732,HEPG2@0.243836,HMEC@0,HSMM@0,HUVEC@0,K562@0.046227,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 24 4 15 4 ENSG00000229227.1 ENST00000424615.1 chr10:46937463-46947258 2 401 9392 intronic -0.94 1 0,0,0 0 0,0,0 0 0 0 0 1.42323253833049 0 0 1.97998296422487 0 0 0 chimp,human,macaque, antisense antisense A549@0.026736,AG04450@0.0063825,BJ@0,GM12878@0.010926,H1HESC@0,HELAS3@0.030617,HEPG2@0.116181,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0.016747,NHLF@0.005288,SKNSHRA@0.0061485, 0 0 0 0 ENSG00000229227.1 ENST00000437899.1 chr10:46937463-46951699 2 367 13867 intronic -9.70 1 0,0,0 0 0,0,0 0 0 0 0 0.963943174442922 0 0 1.34102545611884 0 0 0 human,marmoset, antisense antisense A549@0.026736,AG04450@0.0063825,BJ@0,GM12878@0.010926,H1HESC@0,HELAS3@0.030617,HEPG2@0.116181,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0.016747,NHLF@0.005288,SKNSHRA@0.0061485, 0 0 0 0 ENSG00000231187.2 ENST00000506914.1 chr10:46951472-46966835 2 667 14694 intronic 1.29 0 1,1,1 1 0,0,0 0 13.6309377977406 0 0 13.4422213148224 0 0 96.306247447938 0 0 0 chimp,human,macaque,marmoset,mouse,orangutan, antisense antisense A549@1.9125,AG04450@0.304513,BJ@1.0745,GM12878@0.009604,H1HESC@0.156666,HELAS3@0.594152,HEPG2@1.56763,HMEC@0.076085,HSMM@0.202799,HUVEC@0.124067,K562@0,MCF7@0.588226,NHEK@0.42274,NHLF@0.193254,SKNSHRA@0.928429, 0 0 0 0 ENSG00000231187.2 ENST00000430188.1 chr10:46951553-46953608 2 551 1502 intronic 5.94 0 0,1,0 1 0,0,0 0 0 0 0 0 0 31.9019963702359 25.1797603195739 0 0 0 chimp,cow,horse,human,macaque,marmoset,mouse,orangutan, antisense antisense A549@1.9125,AG04450@0.304513,BJ@1.0745,GM12878@0.009604,H1HESC@0.156666,HELAS3@0.594152,HEPG2@1.56763,HMEC@0.076085,HSMM@0.202799,HUVEC@0.124067,K562@0,MCF7@0.588226,NHEK@0.42274,NHLF@0.193254,SKNSHRA@0.928429, 0 0 0 0 ENSG00000223477.1 ENST00000422732.1 chr10:47096454-47099716 3 2441 817 intergenic 0.57 1 0,1,1 0 0,0,0 0 0 0 3.0073740270381 18.9718482252142 0 3.08480131093814 19.3133414932681 0 0 0 chimp,human,macaque,marmoset,orangutan, lincRNA lincRNA A549@11.2656,AG04450@0.186107,BJ@0.204094,GM12878@0,H1HESC@0.01892,HELAS3@1.34674,HEPG2@0.501107,HMEC@0.762508,HSMM@0,HUVEC@0,K562@0,MCF7@0.273392,NHEK@1.98693,NHLF@0.064725,SKNSHRA@0.487198, 0 0 0 0 ENSG00000224919.1 ENST00000434533.1 chr10:47186203-47192185 2 232 5748 exonic -0.17 0 0,0,0 0 0,0,0 0 0 0 0 0 0 487.086206896552 40.6659707724426 0 0 0 chimp,horse,human,macaque,marmoset,orangutan,panda, antisense antisense A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 54 3 33 3 ENSG00000227310.1 ENST00000456034.1 chr10:47279192-47280335 2 489 652 intergenic 4.65 1 0,0,0 0 0,0,0 0 0 0 0 0 0 0 0 0 0 0 chimp,human,macaque,marmoset,orangutan, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0.141295,HEPG2@0.145232,HMEC@0,HSMM@0,HUVEC@0,K562@0.0283735,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000227310.1 ENST00000439776.1 chr10:47279192-47289833 3 706 9931 intergenic 4.42 1 0,0,0 0 0,0,0 0 0 0 0 0 0 0 0 0 0 0 chimp,human,marmoset,orangutan, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0.141295,HEPG2@0.145232,HMEC@0,HSMM@0,HUVEC@0,K562@0.0283735,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 24 4 15 4 ENSG00000229577.1 ENST00000453605.1 chr10:47556165-47566804 2 157 10480 intergenic 0 0 0,0,0 0 0,0,0 0 0 0 0 0 0 0 0 0 0 0 chimp,human,macaque,marmoset,orangutan, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000226667.1 ENST00000418196.1 chr10:47570513-47573855 2 165 3175 intergenic -0.23 0 0,0,0 0 0,0,0 0 0 0 29.3636363636364 4.19055118110236 0 32.0121212121212 8.22614173228346 0 0 0 chimp,horse,human,macaque,marmoset,orangutan,panda, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000243536.2 ENST00000454837.1 chr10:47620145-47640809 4 426 20232 intergenic 0.11 0 0,0,1 0 0,0,0 0 0 0 0 0 0 0 0 0 0 0 chimp,cow,dog,horse,human,macaque,orangutan,pig, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0.128009,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000243536.2 ENST00000543148.1 chr10:47639863-47644793 7 470 4448 intergenic 0 0 0,0,1 0 0,0,0 0 0 0 1.05531914893617 0.278776978417266 10.478 1.06808510638298 0.28214928057554 10.322 0 0 chimp,human,macaque,orangutan,panda, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0.128009,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 158 2 102 2 ENSG00000198250.7 ENST00000424375.1 chr10:47658234-47701443 20 2114 41057 intergenic 20.97 0 0,1,0 0 0,0,0 0 0 7.106 6.50378429517502 0.474267481793604 15.715 14.3982970671712 0.740677594563655 15.435 0 0 chimp,human,macaque,orangutan, lincRNA lincRNA A549@0.032673,AG04450@0,BJ@0,GM12878@0.0024065,H1HESC@0,HELAS3@0.066484,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0.001192,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000198250.7 ENST00000441923.1 chr10:47658249-47665128 3 631 6244 intergenic 16.68 0 0,1,0 0 0,0,0 0 0 7.106 3.06180665610143 2.57030749519539 15.715 6.02377179080824 3.60089686098655 15.435 0 0 cat,chimp,cow,guinea_pig,human,macaque,marmoset,mouse,orangutan,panda,pig,rabbit,rat, lincRNA lincRNA A549@0.032673,AG04450@0,BJ@0,GM12878@0.0024065,H1HESC@0,HELAS3@0.066484,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0.001192,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000198250.7 ENST00000537271.1 chr10:47658249-47701342 19 1929 41128 intergenic 16.68 0 0,1,0 0 0,0,0 0 0 7.106 5.27682737169518 0.54785061272126 15.715 13.8745463970969 0.815989107177592 15.435 0 1 human,macaque, lincRNA lincRNA A549@0.032673,AG04450@0,BJ@0,GM12878@0.0024065,H1HESC@0,HELAS3@0.066484,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0.001192,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000198250.7 ENST00000447511.1 chr10:47668557-47681735 8 498 12666 intergenic -5.01 0 0,0,0 0 0,0,0 0 0 0 11.9518072289157 0.270251065845571 0 18.8453815261044 0.547134059687352 0 0 0 chimp,cow,horse,human,macaque,orangutan,pig, lincRNA lincRNA A549@0.032673,AG04450@0,BJ@0,GM12878@0.0024065,H1HESC@0,HELAS3@0.066484,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0.001192,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 158 2 102 2 ENSG00000198250.7 ENST00000434908.1 chr10:47668642-47681735 6 422 12661 intergenic -3.46 0 0,0,0 0 0,0,0 0 0 0 14.1042654028436 0.289945501935076 0 22.239336492891 0.569781217913277 0 0 0 chimp,cow,guinea_pig,horse,human,macaque,orangutan,pig, lincRNA lincRNA A549@0.032673,AG04450@0,BJ@0,GM12878@0.0024065,H1HESC@0,HELAS3@0.066484,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0.001192,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000226044.1 ENST00000454672.1 chr10:48324788-48332197 4 595 6808 intergenic 2.35 0 0,1,0 0 0,0,0 0 0 0 0 0.670681551116334 0 0 2.08328437132785 0 0 0 chimp,human,macaque,marmoset,orangutan, lincRNA lincRNA A549@0.386952,AG04450@0,BJ@0.00411,GM12878@0,H1HESC@0,HELAS3@0.146212,HEPG2@0.180874,HMEC@0.041015,HSMM@0,HUVEC@0,K562@0.026818,MCF7@0.232092,NHEK@0.00867033,NHLF@0,SKNSHRA@0.0359225, 0 0 0 0 ENSG00000228865.1 ENST00000431774.1 chr10:48357926-48358600 2 225 447 intronic -1.36 0 0,0,0 0 0,0,0 0 0 0 0 0 0 0 0 0 0 0 chimp,human,macaque,marmoset,orangutan, antisense antisense A549@0.120443,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0.089558,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000204164.5 ENST00000425187.1 chr10:48901102-48922972 7 2424 19434 intergenic 99.36 0 0,1,1 0 0,1,0 0 0 0 74.0041254125413 10.0749202428733 63.662 537.43399339934 23.9486467016569 67.791 0 1 chimp,human,macaque,orangutan, processed_transcript processed_transcript A549@6.56476,AG04450@2.97004,BJ@3.4146,GM12878@4.54318,H1HESC@8.88207,HELAS3@9.24442,HEPG2@12.7233,HMEC@3.25664,HSMM@2.50069,HUVEC@4.56521,K562@15.1307,MCF7@5.30537,NHEK@6.50756,NHLF@1.39417,SKNSHRA@9.421, 0 0 0 0 ENSG00000204164.5 ENST00000445434.2 chr10:48901194-48922958 10 2377 19369 intergenic 76.84 0 0,1,0 0 0,1,0 0 0 0 83.2128733697938 9.14151479167742 63.662 538.363483382415 22.9938561619082 67.791 0 1 chimp,human,macaque,orangutan, processed_transcript processed_transcript A549@6.56476,AG04450@2.97004,BJ@3.4146,GM12878@4.54318,H1HESC@8.88207,HELAS3@9.24442,HEPG2@12.7233,HMEC@3.25664,HSMM@2.50069,HUVEC@4.56521,K562@15.1307,MCF7@5.30537,NHEK@6.50756,NHLF@1.39417,SKNSHRA@9.421, 0 0 0 0 ENSG00000204164.5 ENST00000436180.1 chr10:48903540-48942646 9 750 38340 intergenic 6.72 0 0,0,0 0 0,1,0 0 0 0 237.337333333333 9.80286906624935 70.265 338.872 26.962676056338 133.849 0 0 chimp,guinea_pig,human,macaque,marmoset,orangutan,rat, processed_transcript processed_transcript A549@6.56476,AG04450@2.97004,BJ@3.4146,GM12878@4.54318,H1HESC@8.88207,HELAS3@9.24442,HEPG2@12.7233,HMEC@3.25664,HSMM@2.50069,HUVEC@4.56521,K562@15.1307,MCF7@5.30537,NHEK@6.50756,NHLF@1.39417,SKNSHRA@9.421, 0 0 0 0 ENSG00000204164.5 ENST00000449800.1 chr10:48927373-48950972 8 4066 19519 intergenic 5.30 0 0,0,0 0 0,0,0 0 0 0 79.8622725036891 3.43188687945079 0 158.104279390064 22.3962293150264 1.186 1 1 chimp,human,macaque,marmoset,orangutan, processed_transcript processed_transcript A549@6.56476,AG04450@2.97004,BJ@3.4146,GM12878@4.54318,H1HESC@8.88207,HELAS3@9.24442,HEPG2@12.7233,HMEC@3.25664,HSMM@2.50069,HUVEC@4.56521,K562@15.1307,MCF7@5.30537,NHEK@6.50756,NHLF@1.39417,SKNSHRA@9.421, 0 0 0 0 ENSG00000227781.2 ENST00000438010.1 chr10:48952569-48980342 7 565 27196 intergenic 11.60 0 0,0,0 0 0,0,0 35.1150442477876 0.1094278570378 0 102.782300884956 3.79849977937932 0 333.125663716814 80.5556331813502 0 0 0 chimp,cow,dog,elephant,horse,human,rat, processed_transcript processed_transcript A549@0.099663,AG04450@0.0575865,BJ@0,GM12878@0.027577,H1HESC@0.133079,HELAS3@0.0259025,HEPG2@0.0597785,HMEC@0.028634,HSMM@0,HUVEC@0,K562@0,MCF7@0.0579155,NHEK@0.0523207,NHLF@0.0831185,SKNSHRA@0.175496, 0 0 0 0 ENSG00000232426.1 ENST00000423864.1 chr10:48988121-48989268 2 489 656 intergenic 3.86 1 0,1,1 0 0,0,0 0 0 0 0 0 0 0 0 0 0 0 chimp,human,macaque,marmoset,orangutan, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000232426.1 ENST00000430284.1 chr10:48988121-48998766 3 706 9935 intergenic 2.34 1 0,0,1 0 0,0,0 0 0 0 0 4.58681429290387 0 0 8.02566683442375 0 0 0 chimp,human,marmoset,orangutan, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 24 4 15 4 ENSG00000232462.1 ENST00000429307.1 chr10:49363368-49364177 2 419 388 intergenic -0.46 0 0,0,0 0 0,0,0 0 0 0 8.66587112171838 5.11855670103093 23.439 9.68973747016706 5.02577319587629 27.689 0 0 cat,chimp,cow,dog,elephant,horse,human,macaque,marmoset,orangutan,pig, sense_intronic sense_intronic A549@0.052178,AG04450@0,BJ@0,GM12878@0.0260385,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0.066966,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000248682.1 ENST00000505718.1 chr10:49718568-49719632 2 468 594 intronic -2.38 0 0,0,0 0 0,0,0 0 0 0 0 0 3.468 0 0 3.468 0 0 cat,chimp,human,macaque,marmoset,orangutan,panda, sense_intronic sense_intronic A549@0.006076,AG04450@0.0544385,BJ@0.045773,GM12878@0,H1HESC@0.0803575,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0.149236,K562@0.0677835,MCF7@0,NHEK@0.000721,NHLF@0,SKNSHRA@0.0135795, 0 0 0 0 ENSG00000251413.1 ENST00000514425.1 chr10:49832049-49833138 2 595 492 intronic -12.30 0 0,1,0 0 0,0,0 0 0 0 0 0 4.302 0 0 4.518 0 1 chimp,human,orangutan, sense_intronic sense_intronic A549@0.016002,AG04450@0.0086945,BJ@0.00978,GM12878@0.0036585,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0.002038,HSMM@0,HUVEC@0.0303315,K562@0,MCF7@0.0015305,NHEK@0,NHLF@0,SKNSHRA@0.033027, 1 96 0 0 ENSG00000236800.1 ENST00000440750.1 chr10:49872244-49880469 2 333 7890 intergenic 0.56 0 0,0,0 0 0,0,0 0 0 0 0 1.25690747782003 0 0 1.54106463878327 0 0 0 chimp,dog,human,macaque,marmoset,orangutan, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0.149234,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000237241.1 ENST00000414178.1 chr10:50042957-50044714 4 507 1244 intronic -7.37 0 0,0,0 0 0,0,0 0 251.329581993569 0 0 243.637459807074 0 0 257.24115755627 0 0 0 chimp,human,macaque,marmoset,orangutan,panda, antisense antisense A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000228403.1 ENST00000423256.1 chr10:50086067-50086694 2 271 354 intronic -2.08 0 0,0,0 0 0,0,0 0 0 37.942 0 0 51.567 0 0 52.806 0 0 cat,chimp,cow,dog,human,macaque,marmoset,orangutan, sense_intronic sense_intronic A549@0,AG04450@0,BJ@0,GM12878@0.23427,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000233665.1 ENST00000428825.1 chr10:50184597-50186927 2 685 1643 exonic 3.79 0 0,0,0 0 0,0,0 120.624817518248 0 0 109.094890510949 9.8776628119294 0 106.585401459854 9.00182592818016 0 0 0 chimp,cow,dog,elephant,horse,human,macaque,marmoset,orangutan,panda,pig,rat, antisense antisense A549@0,AG04450@0,BJ@0.054434,GM12878@0.012215,H1HESC@0.009641,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0.0066365,HUVEC@0,K562@0.0792895,MCF7@0,NHEK@0,NHLF@0.005617,SKNSHRA@0.042092, 0 0 0 0 ENSG00000226576.1 ENST00000422966.1 chr10:50192609-50226942 2 472 33859 exonic -5.28 0 0,0,1 0 0,0,0 0 6.56345432529017 11.5 0 8.7354617679199 6.43 0 12.0265217519714 6.715 0 0 chimp,human,macaque,marmoset,orangutan, antisense antisense A549@0,AG04450@0,BJ@0.015582,GM12878@0.263015,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000234736.1 ENST00000442525.1 chr10:50329884-50359592 6 1994 27704 encompassing 0.83 1 0,0,0 0 0,0,0 8.88164493480441 4.60485850418712 0 1.93781344032096 9.61879151025123 0 1.99398194583751 9.22603234190009 0 0 0 chimp,horse,human,macaque,marmoset,orangutan,pig, antisense antisense A549@0,AG04450@0,BJ@0,GM12878@0.005424,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0.002165,HUVEC@0,K562@0.0027255,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0.0026895, 0 0 0 0 ENSG00000234736.1 ENST00000443389.1 chr10:50329889-50359019 6 1047 28073 encompassing 0.83 0 0,0,0 0 0,0,0 0 4.54433085170805 0 0 9.49235920635486 0 0 9.10476258326506 0 0 0 chimp,human,macaque,orangutan,pig, antisense antisense A549@0,AG04450@0,BJ@0,GM12878@0.005424,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0.002165,HUVEC@0,K562@0.0027255,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0.0026895, 0 0 0 0 ENSG00000234736.1 ENST00000435809.1 chr10:50330131-50349375 3 471 18769 encompassing -3.15 0 0,0,0 0 0,0,0 0 6.15232564334807 0 0 12.5286376471842 0 0 11.9493313442378 0 0 0 chimp,cow,dog,horse,human,macaque,orangutan,pig, antisense antisense A549@0,AG04450@0,BJ@0,GM12878@0.005424,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0.002165,HUVEC@0,K562@0.0027255,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0.0026895, 0 0 0 0 ENSG00000234736.1 ENST00000440054.1 chr10:50345540-50359195 3 674 12977 intergenic 1.74 1 0,0,0 0 0,0,0 26.2759643916914 5.31016413654928 0 5.73293768545994 6.58780920089389 0 5.89910979228487 6.62572243199507 0 0 0 chimp,human,macaque,marmoset,orangutan,panda,pig, antisense antisense A549@0,AG04450@0,BJ@0,GM12878@0.005424,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0.002165,HUVEC@0,K562@0.0027255,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0.0026895, 0 0 0 0 ENSG00000236208.1 ENST00000437677.1 chr10:50504157-50506825 2 751 1915 intergenic 7.03 0 0,1,1 0 0,0,0 90.4207723035952 8.36657963446475 193.306 86.7323568575233 2.39686684073107 129.242 62.4460719041278 2.49086161879896 468.5 0 0 cat,chimp,cow,dog,elephant,horse,human,macaque,marmoset,orangutan,panda,pig,rabbit, antisense antisense A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0.005465,HUVEC@0.0050005,K562@0.765462,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000236208.1 ENST00000442700.1 chr10:50504495-50507063 2 532 2034 intergenic 7.03 1 1,1,1 0 0,0,0 193.669172932331 30.4601769911504 112.632 168.71992481203 8.56194690265487 91.696 134.265037593985 7.73205506391347 111.913 0 0 cat,chimp,cow,dog,elephant,guinea_pig,horse,human,macaque,marmoset,mouse,orangutan,panda,pig,rabbit,rat, antisense antisense A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0.005465,HUVEC@0.0050005,K562@0.765462,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000235939.1 ENST00000423283.1 chr10:50627323-50680949 2 433 53191 intronic 5.38 0 1,1,1 0 0,0,0 0 8.65627643774323 0 1.45034642032333 7.179146848151 0 1.89376443418014 14.6968096106484 0 0 0 elephant,horse,human,macaque,marmoset,orangutan,panda, antisense antisense A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0.0047265,NHEK@0.017902,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000214986.4 ENST00000426412.2 chr10:51214507-51216406 2 320 1577 intergenic 17.87 0 0,0,0 0 0,0,0 0 0 0 0 0 0 45.9 2.77362079898542 66.374 0 0 cat,chimp,cow,elephant,horse,human,macaque,marmoset,opossum,orangutan,panda,pig,rabbit,rat, lincRNA lincRNA A549@0,AG04450@0.0219415,BJ@0.007646,GM12878@0.014559,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0.0166295,MCF7@0.0326905,NHEK@0.0246003,NHLF@0,SKNSHRA@0.0595725, 191 2 123 2 ENSG00000244393.2 ENST00000418400.1 chr10:51253146-51291409 5 804 37451 intergenic 3.82 0 0,0,0 0 0,0,0 0 0 0 125.332089552239 14.0412806066594 8.338 154.582089552239 74.8214733918987 12.5 0 0 chimp,human,macaque,marmoset,orangutan, processed_transcript processed_transcript A549@3.48602,AG04450@3.86689,BJ@3.50116,GM12878@5.92571,H1HESC@4.69227,HELAS3@5.01484,HEPG2@6.48353,HMEC@1.4483,HSMM@1.78012,HUVEC@2.92523,K562@10.1504,MCF7@3.12464,NHEK@3.39948,NHLF@1.30156,SKNSHRA@9.77256, 111 2 63 2 ENSG00000244393.2 ENST00000415340.1 chr10:51253787-51262426 2 558 8079 intergenic 1.79 0 0,0,0 0 0,0,0 0 0 0 0 0 0 0 0 0 0 0 chimp,elephant,human,macaque,opossum,orangutan,pig, processed_transcript processed_transcript A549@3.48602,AG04450@3.86689,BJ@3.50116,GM12878@5.92571,H1HESC@4.69227,HELAS3@5.01484,HEPG2@6.48353,HMEC@1.4483,HSMM@1.78012,HUVEC@2.92523,K562@10.1504,MCF7@3.12464,NHEK@3.39948,NHLF@1.30156,SKNSHRA@9.77256, 147 2 94 2 ENSG00000244393.2 ENST00000399508.2 chr10:51253926-51371300 9 947 116411 intergenic 5.37 0 0,1,0 0 0,0,1 92.0718057022175 11.1573992148508 0 382.848996832101 22.6927524031234 87.357 430.128827877508 47.5203803764249 105.521 0 0 chimp,cow,dog,guinea_pig,horse,human,macaque,marmoset,mouse,opossum,orangutan,panda,pig,platypus,rabbit,rat, processed_transcript processed_transcript A549@3.48602,AG04450@3.86689,BJ@3.50116,GM12878@5.92571,H1HESC@4.69227,HELAS3@5.01484,HEPG2@6.48353,HMEC@1.4483,HSMM@1.78012,HUVEC@2.92523,K562@10.1504,MCF7@3.12464,NHEK@3.39948,NHLF@1.30156,SKNSHRA@9.77256, 0 0 0 0 ENSG00000244393.2 ENST00000432221.2 chr10:51287202-51371338 7 973 83151 intergenic 7.95 0 0,1,0 0 0,0,1 131.510791366906 14.3989609265072 0 489.255909558068 26.1436302630155 77.757 488.424460431655 33.8367788721723 96.329 0 0 chimp,cow,dog,elephant,guinea_pig,horse,human,macaque,marmoset,mouse,opossum,orangutan,panda,pig,rabbit,rat, processed_transcript processed_transcript A549@3.48602,AG04450@3.86689,BJ@3.50116,GM12878@5.92571,H1HESC@4.69227,HELAS3@5.01484,HEPG2@6.48353,HMEC@1.4483,HSMM@1.78012,HUVEC@2.92523,K562@10.1504,MCF7@3.12464,NHEK@3.39948,NHLF@1.30156,SKNSHRA@9.77256, 109 2 62 2 ENSG00000235618.2 ENST00000456967.1 chr10:51780942-51827563 7 2170 44439 intergenic 8.72 0 0,1,1 1 0,0,0 0 0 0 58.4027649769585 2.02018497265915 83.593 67.2884792626728 34.433335583609 68.069 0 0 chimp,human,orangutan, processed_transcript processed_transcript A549@0.067758,AG04450@0.264786,BJ@0.216937,GM12878@0.392272,H1HESC@0.201844,HELAS3@0.231994,HEPG2@0.288976,HMEC@0.059247,HSMM@0.0924415,HUVEC@0.220458,K562@0.329166,MCF7@0.335911,NHEK@0.137966,NHLF@0.0485285,SKNSHRA@0.305345, 0 0 0 0 ENSG00000225303.1 ENST00000437213.1 chr10:52232574-52234006 2 371 1059 intronic -1.93 0 0,0,0 0 0,0,0 0 25.0509915014164 0 0 11.4164305949008 0 0 11.9414542020774 0 0 0 chimp,cow,horse,human,macaque,marmoset,orangutan,pig, antisense antisense A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0.0060575,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000226561.1 ENST00000431906.1 chr10:52348409-52349592 2 441 740 intronic -1.95 0 0,0,0 0 0,0,0 0 0 0 0 0 0 0 0 0 0 0 chimp,cow,human,macaque,marmoset,orangutan, sense_intronic sense_intronic A549@0,AG04450@0.021122,BJ@0.029067,GM12878@0.027369,H1HESC@0,HELAS3@0.0232795,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0.0409575,MCF7@0,NHEK@0.0175983,NHLF@0,SKNSHRA@0.021718, 2 44 0 0 ENSG00000226200.1 ENST00000443374.1 chr10:52388910-52391396 2 2087 397 intergenic 5.55 0 0,0,0 0 0,0,0 0 0 0 0 0 0 330.451844753234 50.2342569269521 0 0 0 chimp,human,macaque,orangutan, antisense antisense A549@0.737461,AG04450@0.449352,BJ@0.504781,GM12878@0.932008,H1HESC@0.554174,HELAS3@0.575733,HEPG2@0.513661,HMEC@0.170528,HSMM@0.495148,HUVEC@0.444623,K562@0.747518,MCF7@0.662216,NHEK@0.33503,NHLF@0.745306,SKNSHRA@1.36538, 0 0 0 0 ENSG00000231345.2 ENST00000449695.1 chr10:52415727-52420028 2 2760 1539 exonic 15.96 0 0,0,1 0 0,0,0 0 0 0 120.014130434783 0 0 373.077898550725 0 0 0 0 cat,chimp,cow,dog,elephant,guinea_pig,horse,human,macaque,marmoset,mouse,opossum,orangutan,panda,rabbit, processed_transcript processed_transcript A549@0.010777,AG04450@0.00202,BJ@0,GM12878@0.020969,H1HESC@0.0139875,HELAS3@0.010579,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0.006327,K562@0.0058565,MCF7@0.018794,NHEK@0.00165933,NHLF@0,SKNSHRA@0.012348, 0 0 0 0 ENSG00000229711.1 ENST00000438919.1 chr10:52582452-52584285 4 632 1195 intronic 4.11 0 0,0,1 0 0,0,0 0 5.94644351464435 0 0 5.5071129707113 0 0 7.06108786610879 0 0 0 chimp,human,macaque,marmoset,orangutan, sense_intronic sense_intronic A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0.0614895,HEPG2@0.012068,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000223502.1 ENST00000343087.4 chr10:52822339-52828313 2 419 5553 intronic -8.36 1 0,1,0 0 0,0,0 0 7.24833423374752 40.894 0 11.3021790023411 45.881 0 11.1395641995318 41.915 0 0 chimp,human,macaque,marmoset,orangutan, antisense antisense A549@0,AG04450@0.0324835,BJ@0.023192,GM12878@0,H1HESC@0.204341,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0.104987,NHEK@0.00606433,NHLF@0.0644735,SKNSHRA@0.053967, 2 44 0 0 ENSG00000231132.1 ENST00000435271.1 chr10:53004654-53005566 3 443 465 intronic -2.28 0 0,0,0 0 0,0,0 166.699774266366 31.5870967741935 0 96.9232505643341 36.6838709677419 3.179 79.1264108352144 47.2043010752688 3.245 0 0 cat,chimp,cow,guinea_pig,human,macaque,marmoset,orangutan,pig,rabbit,rat, antisense antisense A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000235279.1 ENST00000419889.1 chr10:53062326-53066469 2 398 3743 intronic -2.94 0 0,0,1 0 0,0,0 0 0 0 4.80402010050251 1.4034197168047 0 4.88442211055276 2.84183809778253 0 0 0 cat,chimp,cow,elephant,guinea_pig,horse,human,macaque,marmoset,orangutan,pig, sense_intronic sense_intronic A549@0,AG04450@0.392478,BJ@0.270109,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0.0806945, 0 0 0 0 ENSG00000236671.1 ENST00000452247.1 chr10:53990519-54061062 4 865 69672 exonic -2.93 0 0,0,1 0 0,0,0 40.5780346820809 38.4823889080262 0 46.2890173410405 39.3024600987484 0 40.5179190751445 36.7790504076243 50.337 0 0 chimp,guinea_pig,human,macaque,marmoset,mouse,orangutan,rabbit, lincRNA processed_transcript A549@0.563778,AG04450@0.0414905,BJ@0.341314,GM12878@0,H1HESC@0.0028475,HELAS3@0.103881,HEPG2@0.0686345,HMEC@0.098398,HSMM@0.220973,HUVEC@0.147523,K562@0,MCF7@0.463447,NHEK@0.132284,NHLF@0.041873,SKNSHRA@0.503243, 0 0 0 0 ENSG00000236671.1 ENST00000426785.1 chr10:54011725-54057675 4 1106 44838 exonic -0.67 1 0,0,1 0 0,0,0 110.565099457505 41.6854230786386 349.148 120.245027124774 43.562380124002 300.242 109.777576853526 40.8657388821981 262.669 0 0 cat,chimp,cow,dog,elephant,guinea_pig,horse,human,macaque,marmoset,mouse,opossum,orangutan,panda,pig,platypus,rabbit,rat, lincRNA processed_transcript A549@0.563778,AG04450@0.0414905,BJ@0.341314,GM12878@0,H1HESC@0.0028475,HELAS3@0.103881,HEPG2@0.0686345,HMEC@0.098398,HSMM@0.220973,HUVEC@0.147523,K562@0,MCF7@0.463447,NHEK@0.132284,NHLF@0.041873,SKNSHRA@0.503243, 0 0 0 0 ENSG00000236671.1 ENST00000420193.1 chr10:54060563-54073888 6 965 12350 intergenic 2.25 0 0,0,0 0 0,0,0 55.7502590673575 21.139028340081 258.089 61.8124352331606 16.1995141700405 160.342 62.0880829015544 23.6780566801619 154.926 0 0 chimp,cow,human,macaque,orangutan,pig, lincRNA processed_transcript A549@0.563778,AG04450@0.0414905,BJ@0.341314,GM12878@0,H1HESC@0.0028475,HELAS3@0.103881,HEPG2@0.0686345,HMEC@0.098398,HSMM@0.220973,HUVEC@0.147523,K562@0,MCF7@0.463447,NHEK@0.132284,NHLF@0.041873,SKNSHRA@0.503243, 0 0 0 0 ENSG00000231131.1 ENST00000435813.1 chr10:54210637-54215032 3 969 3422 intergenic 3.89 1 1,1,1 0 0,0,0 0 81.635885447107 0 0 95.27089421391 0 0 92.333722969024 0 0 0 chimp,horse,human,marmoset,orangutan,rabbit, lincRNA processed_transcript A549@3.04216,AG04450@0.0064375,BJ@0.107403,GM12878@0,H1HESC@0,HELAS3@0.0491455,HEPG2@0.151582,HMEC@2.67568,HSMM@0.0070355,HUVEC@0,K562@0,MCF7@8.12342,NHEK@4.23662,NHLF@0.0020075,SKNSHRA@0.007053, 0 0 0 0 ENSG00000231131.1 ENST00000422763.1 chr10:54211074-54230293 4 566 18647 intergenic 3.89 0 0,0,1 0 0,0,0 0 19.8804633453102 0 0 34.4920898804097 0 0 35.6839706118947 1.944 0 0 chimp,dog,horse,human,macaque,marmoset,orangutan, lincRNA processed_transcript A549@3.04216,AG04450@0.0064375,BJ@0.107403,GM12878@0,H1HESC@0,HELAS3@0.0491455,HEPG2@0.151582,HMEC@2.67568,HSMM@0.0070355,HUVEC@0,K562@0,MCF7@8.12342,NHEK@4.23662,NHLF@0.0020075,SKNSHRA@0.007053, 0 0 0 0 ENSG00000228651.1 ENST00000448017.1 chr10:54316462-54320865 2 538 3863 intergenic -0.88 0 0,0,0 0 0,0,0 0 0 0 0 3.09241522133057 0 0 4.24592285788247 1.645 0 0 chimp,cow,horse,human,macaque,marmoset,orangutan,panda, antisense antisense A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0.101766,HEPG2@0.603389,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000228651.1 ENST00000443523.1 chr10:54316743-54515169 3 366 198056 encompassing -1.71 1 1,1,1 0 0,0,0 0 13.3343195863796 0 0 16.9242537464152 0 0 17.9833430948823 0 0 0 chimp,cow,horse,human,macaque,marmoset,orangutan,panda,pig, antisense antisense A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0.101766,HEPG2@0.603389,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000227121.1 ENST00000444155.1 chr10:54733248-54735575 3 412 1911 intergenic 3.40 0 0,0,1 0 0,0,0 0 0 0 0 0 0 0 3.80900052328624 3.18 0 0 chimp,human,macaque,marmoset,orangutan, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0.0420765,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0.05327,MCF7@0.177039,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000226296.1 ENST00000449272.1 chr10:55050832-55070825 2 595 19396 intergenic -8.26 1 0,0,0 0 0,0,0 0 0.533615178387296 0 0 0.189832955248505 0 0 1.48494534955661 0 0 0 chimp,cow,elephant,horse,human,macaque,marmoset,orangutan,panda,pig,rabbit, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0.0152015, 0 0 0 0 ENSG00000234173.1 ENST00000422842.1 chr10:56245990-56415811 6 2294 167517 intronic 3.25 0 0,0,0 0 0,0,0 0 2.36409439042008 0 0 4.60904863386999 3.42 0.847428073234525 9.63944554880997 4.606 0 0 chimp,human,macaque,marmoset,orangutan, processed_transcript processed_transcript A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000236958.1 ENST00000414295.1 chr10:56624434-56628882 2 205 4241 intronic 0 0 0,0,0 0 0,0,0 0 10.477481726008 0 0 18.6434803112473 0 0 20.0646074039142 0 0 0 chimp,human,macaque,marmoset,orangutan, sense_intronic sense_intronic A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000236744.1 ENST00000457975.1 chr10:57007508-57356993 4 442 349037 intronic -2.13 0 0,0,0 0 0,0,0 0 2.51641803018018 0 0 3.89238676701897 0 0 4.56697140990783 216.802 0 0 chimp,human,macaque,marmoset,orangutan, processed_transcript processed_transcript A549@0.0045395,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0.0115085, 0 0 0 0 ENSG00000223800.1 ENST00000453639.1 chr10:57228087-57228982 2 314 579 intronic 0 0 0,0,0 0 0,0,0 0 0 0 0 28.4887737478411 0 0 36.0949913644214 0 0 0 chimp,dog,horse,human,macaque,orangutan, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000228048.1 ENST00000427182.1 chr10:57265979-57272977 2 434 6562 intronic 0 0 0,0,0 0 0,0,0 27.0967741935484 6.2730874733313 0 85.1751152073733 6.49664736360866 0 85.4055299539171 6.84928375495276 0 0 0 cat,chimp,cow,dog,elephant,guinea_pig,horse,human,macaque,marmoset,mouse,orangutan,panda,pig,rabbit,rat, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000228527.1 ENST00000440189.1 chr10:60064313-60065381 2 326 740 intergenic 3.66 0 0,1,0 0 0,0,0 0 0 0 25.7668711656442 11.6756756756757 0 28.9079754601227 12.2810810810811 0 0 0 cat,chimp,dog,horse,human,macaque,marmoset,orangutan,panda, lincRNA lincRNA A549@0.015039,AG04450@0.00718,BJ@0.0147555,GM12878@0.0142925,H1HESC@0,HELAS3@0.056531,HEPG2@0.025983,HMEC@0,HSMM@0,HUVEC@0,K562@0.029134,MCF7@0.0309255,NHEK@0.00778367,NHLF@0.0058825,SKNSHRA@0, 0 0 0 0 ENSG00000237949.1 ENST00000432535.1 chr10:60759386-60761303 2 475 1440 intergenic -3.58 1 1,1,1 0 0,0,0 0 0 39.294 12.9368421052632 0 43.097 13.2421052631579 0 49.524 0 0 chimp,dog,guinea_pig,horse,human,macaque,marmoset,mouse,orangutan,pig,rabbit,rat, lincRNA lincRNA A549@0.009101,AG04450@0.0093975,BJ@0.0101465,GM12878@0.01828,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0.0876685,HUVEC@0,K562@0,MCF7@0,NHEK@0.00553567,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000236556.1 ENST00000433249.1 chr10:61041907-61042595 2 334 352 intronic -13.50 0 0,0,0 0 0,0,0 0 0 0 0 6.34090909090909 0 0 6.62215909090909 4.86 0 0 cat,chimp,cow,dog,elephant,horse,human,macaque,marmoset,orangutan,panda,pig, antisense antisense A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0.0579995,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0.0135285, 0 0 0 0 ENSG00000235140.1 ENST00000450677.1 chr10:61348908-61371006 4 533 21559 intergenic -2.27 0 0,0,0 0 0,0,0 0 12.1595157474837 0 0 11.0019945266478 0 0 13.6912194443156 0 0 0 chimp,dog,horse,human,macaque,marmoset,orangutan, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0.0042325, 0 0 0 0 ENSG00000227877.1 ENST00000430431.1 chr10:61496753-61513154 4 491 15904 intergenic -13.30 1 0,0,0 0 0,0,0 140.747454175153 3.20233903420523 58.286 190.40733197556 5.93008048289738 40.814 197.06517311609 6.49415241448692 48.843 0 0 cat,chimp,cow,dog,elephant,horse,human,macaque,marmoset,orangutan,panda,pig,rabbit, lincRNA lincRNA A549@0.0051435,AG04450@0,BJ@0,GM12878@0,H1HESC@0.004191,HELAS3@0.0110765,HEPG2@0,HMEC@0,HSMM@1.92698,HUVEC@0,K562@0,MCF7@0.0041535,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000227877.1 ENST00000414264.1 chr10:61496753-61513203 3 419 16027 intergenic -7.01 1 0,0,0 0 0,0,0 210.073985680191 3.17776252573782 39.372 236.873508353222 5.88456978848194 34.625 244.639618138425 6.44431272228115 42.629 0 0 cat,chimp,cow,dog,elephant,guinea_pig,horse,human,macaque,marmoset,mouse,orangutan,panda,pig,rabbit, lincRNA lincRNA A549@0.0051435,AG04450@0,BJ@0,GM12878@0,H1HESC@0.004191,HELAS3@0.0110765,HEPG2@0,HMEC@0,HSMM@1.92698,HUVEC@0,K562@0,MCF7@0.0041535,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000232682.1 ENST00000414383.1 chr10:61815632-61820501 2 1544 3323 exonic -2.30 0 0,0,0 0 0,0,0 373.843264248705 10.6903400541679 106.215 389.319300518135 5.44056575383689 119.51 340.76878238342 7.41287992777611 106.783 0 0 cat,chimp,cow,dog,elephant,guinea_pig,horse,human,macaque,marmoset,orangutan,panda,pig,platypus,rabbit, antisense antisense A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0.003765,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0.0015885,MCF7@0.0247675,NHEK@0.007629,NHLF@0,SKNSHRA@0.010288, 0 0 0 0 ENSG00000254271.1 ENST00000517854.1 chr10:62494100-62501586 2 432 7052 intergenic -7.89 0 0,0,1 0 0,0,0 15.4907407407407 10.7185195689166 9.799 14.0023148148148 14.9370391378332 14.612 14.4814814814815 18.7453204764606 14.839 0 0 chimp,horse,human,macaque,marmoset,orangutan, antisense antisense A549@0,AG04450@0,BJ@0,GM12878@0.010802,H1HESC@0.0815285,HELAS3@0,HEPG2@0,HMEC@0.037738,HSMM@0,HUVEC@0,K562@0,MCF7@0.079487,NHEK@0.00588267,NHLF@0,SKNSHRA@0.0180515, 0 0 0 0 ENSG00000227244.1 ENST00000441142.1 chr10:62732875-62786178 2 661 52640 intronic -7.10 0 0,0,1 0 0,0,0 0 41.261759118541 0 2.99697428139183 51.2720934650456 22.47 4.67019667170953 48.6353343465046 33.684 0 0 cat,chimp,cow,dog,guinea_pig,horse,human,macaque,marmoset,orangutan,panda,pig,rabbit, lincRNA lincRNA A549@0.016693,AG04450@0.003552,BJ@0,GM12878@0,H1HESC@0,HELAS3@0.006296,HEPG2@0.009777,HMEC@0,HSMM@0,HUVEC@0.013005,K562@0.0037045,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000227244.1 ENST00000417931.1 chr10:62776033-62786178 2 694 9449 intergenic -7.10 0 0,0,1 0 0,0,0 0 48.4375066144566 0 0 67.9030585247116 2.39 0 59.8981902846862 2.43 0 0 cat,chimp,cow,guinea_pig,horse,human,macaque,marmoset,orangutan,panda,pig,rabbit, lincRNA lincRNA A549@0.016693,AG04450@0.003552,BJ@0,GM12878@0,H1HESC@0,HELAS3@0.006296,HEPG2@0.009777,HMEC@0,HSMM@0,HUVEC@0.013005,K562@0.0037045,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000237233.1 ENST00000389640.3 chr10:63212397-63227351 2 745 14207 exonic 3.91 0 0,0,0 0 0,0,0 84.9570469798658 30.6921939888787 0.9 159.076510067114 32.2243260364609 0.956 141.357046979866 32.0468782994299 0.972 0 0 chimp,cow,dog,elephant,guinea_pig,horse,human,macaque,marmoset,mouse,orangutan,pig,rabbit, antisense antisense A549@0.0090295,AG04450@0.0309185,BJ@0.127349,GM12878@0.0071095,H1HESC@0.357955,HELAS3@0.016388,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0.0147085,K562@0,MCF7@0.094673,NHEK@0,NHLF@0.015498,SKNSHRA@0.0967375, 0 0 0 0 ENSG00000233643.1 ENST00000441001.1 chr10:63541514-63581004 4 473 39011 intergenic 0.86 0 0,0,0 0 0,0,0 19.7632135306554 42.2582348568353 41.293 16.1310782241015 46.5333111173772 44.654 16.0718816067653 44.1056881392428 73.418 0 0 cat,chimp,cow,horse,human,macaque,marmoset,orangutan, lincRNA lincRNA A549@0,AG04450@0.004699,BJ@0,GM12878@0,H1HESC@0,HELAS3@0.684454,HEPG2@0.074341,HMEC@0,HSMM@0.0043135,HUVEC@0,K562@0.414187,MCF7@0.029886,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000234756.1 ENST00000442753.1 chr10:64049280-64063792 3 703 13805 intergenic -3.49 0 0,0,0 0 0,0,0 0 1.24302788844622 0 25.5334281650071 7.0335385729808 1.673 26.2446657183499 10.4856211517566 3.888 0 0 cat,chimp,cow,dog,guinea_pig,horse,human,macaque,marmoset,orangutan,panda,pig,rabbit, lincRNA lincRNA A549@0,AG04450@0,BJ@0.0034275,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0.042374,HUVEC@0,K562@0,MCF7@0.0056955,NHEK@0.0212363,NHLF@0.0164595,SKNSHRA@0.0076195, 0 0 0 0 ENSG00000239604.2 ENST00000504060.2 chr10:64099347-64134886 4 2617 32916 intronic 8.87 0 0,0,0 0 0,0,0 0 4.85797180702394 32.634 2.01184562476118 7.89193705188966 16.827 1.7508597630875 8.19346214606878 19.905 0 1 chimp,human,macaque, lincRNA lincRNA A549@0.0082405,AG04450@0.049258,BJ@0.035965,GM12878@0,H1HESC@0.0037765,HELAS3@0.003567,HEPG2@0,HMEC@0.006249,HSMM@0.002609,HUVEC@0,K562@0,MCF7@0.0218255,NHEK@0.0457973,NHLF@0.014839,SKNSHRA@0.103037, 0 0 0 0 ENSG00000238280.1 ENST00000425290.1 chr10:64553322-64565647 3 685 11636 exonic 4.24 0 0,1,1 0 0,0,0 149.004379562044 94.2905637676177 375.853 95.7109489051095 87.0488999656239 110.671 87.6759124087591 87.1695599862496 108.303 0 0 chimp,dog,horse,human,macaque,marmoset,orangutan,pig, antisense antisense A549@0.0552245,AG04450@0.008606,BJ@0.0938995,GM12878@0.448631,H1HESC@0.0035965,HELAS3@0.0671505,HEPG2@0.026017,HMEC@0.017854,HSMM@0.06788,HUVEC@0,K562@0.0246005,MCF7@0.0681385,NHEK@0.0430617,NHLF@0.011344,SKNSHRA@0.0099045, 0 0 0 0 ENSG00000224301.1 ENST00000433019.1 chr10:64883698-64885297 3 502 1093 intergenic 0 1 0,1,0 0 0,0,0 0 0 0 0 0 0 20.0597609561753 0 0 0 0 chimp,human,marmoset,orangutan, antisense antisense A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0.0049,HELAS3@0,HEPG2@0.0043085,HMEC@0,HSMM@0.004514,HUVEC@0,K562@0.004598,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000230677.1 ENST00000428581.1 chr10:65035906-65041994 2 475 5611 intronic -9.48 0 0,0,1 0 0,0,0 0 0 0 19.2757894736842 0 8.408 52.6484210526316 0.476385671003386 8.464 0 0 cat,chimp,cow,dog,elephant,guinea_pig,horse,human,macaque,marmoset,orangutan,panda,pig, antisense antisense A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000226095.1 ENST00000417210.1 chr10:65086093-65086670 2 438 137 intronic -7.23 0 0,0,0 0 0,0,0 0 0 0 0 0 2.868 279.920091324201 349.197080291971 4.267 0 0 chimp,human,macaque,marmoset,orangutan, sense_intronic sense_intronic A549@0.058237,AG04450@0.036705,BJ@0.056137,GM12878@0.038535,H1HESC@0.0273885,HELAS3@0.0583585,HEPG2@0.10456,HMEC@0,HSMM@0,HUVEC@0.083279,K562@0.036881,MCF7@0,NHEK@0.0199767,NHLF@0,SKNSHRA@0.0462325, 0 0 0 0 ENSG00000228566.1 ENST00000444770.1 chr10:65424424-65750328 3 791 325109 intergenic 3.96 0 0,1,1 0 0,0,0 0 14.5171434811094 0 0 15.9160404664282 0 0 19.8530092984199 0 0 0 elephant,guinea_pig,human, lincRNA lincRNA A549@0,AG04450@0.01545,BJ@0,GM12878@0,H1HESC@0.0501395,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0.005742,HUVEC@0,K562@0,MCF7@0,NHEK@0.009749,NHLF@0.0048605,SKNSHRA@0.184306, 0 0 0 0 ENSG00000226426.1 ENST00000451946.1 chr10:65796105-65797040 2 620 313 intergenic 2.01 0 0,1,1 0 0,0,0 178.029032258065 40.9712460063898 0 107.238709677419 6.33865814696486 0 128.691935483871 6.61980830670927 0 0 0 cat,chimp,cow,dog,elephant,horse,human,macaque,marmoset,mouse,orangutan,panda,pig,rabbit, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0.006274,SKNSHRA@0, 0 0 0 0 ENSG00000224714.1 ENST00000425902.1 chr10:66662885-66684276 2 579 20810 intergenic 1.77 0 0,0,1 0 0,0,0 0 0.581451225372417 0 0 0.0803940413262854 0 0 1.48543969245555 0 0 0 chimp,human,macaque,marmoset,orangutan, lincRNA processed_transcript A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0.0705055,HELAS3@0.0287375,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0.0684015,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000235356.1 ENST00000428346.1 chr10:67073543-67074728 3 304 877 intergenic 0 0 0,0,0 0 0,0,0 0 0 0 0 0 0 0 0 0 0 0 cat,chimp,cow,guinea_pig,human,macaque,marmoset,orangutan,pig, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0.015226,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0.0151265,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000228065.1 ENST00000433152.1 chr10:67345446-67441220 3 741 95029 intergenic -2.00 0 0,0,0 0 0,0,0 0 1.8123941112713 0 0 3.62420945185154 0 0 5.85670689999895 0 0 0 chimp,guinea_pig,horse,human,macaque,marmoset,orangutan, lincRNA lincRNA A549@0.701218,AG04450@0.334261,BJ@0.562349,GM12878@0.647042,H1HESC@1.49903,HELAS3@0.309805,HEPG2@0.421534,HMEC@0.27022,HSMM@0.197973,HUVEC@0.209194,K562@0.679409,MCF7@0.642738,NHEK@0.254255,NHLF@0.0629415,SKNSHRA@1.29607, 0 0 0 0 ENSG00000225299.1 ENST00000422963.1 chr10:68812367-68814786 2 503 1914 intronic -2.85 1 0,0,0 0 0,0,0 0 0 0 0 0 0 0 1.01567398119122 0 0 0 cat,chimp,cow,dog,guinea_pig,horse,human,macaque,marmoset,orangutan,panda,pig, antisense antisense A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000233590.1 ENST00000444086.1 chr10:69993008-70002136 3 462 8662 intergenic -3.36 0 0,0,0 0 0,0,0 274.181818181818 231.065458323713 0 216.974025974026 13.3858231355345 0 156.127705627706 18.6298776264142 0 0 0 chimp,cow,dog,elephant,horse,human,macaque,marmoset,mouse,opossum,orangutan,panda,platypus,rabbit,rat, lincRNA lincRNA A549@0.024263,AG04450@0,BJ@0,GM12878@0.005621,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0.025615,K562@0,MCF7@0,NHEK@0.003166,NHLF@0.004679,SKNSHRA@0.005441, 0 0 0 0 ENSG00000233590.1 ENST00000429634.1 chr10:69993010-69995190 2 415 1763 intergenic -3.36 0 0,1,0 0 0,0,0 305.233734939759 495.398752127056 0 241.546987951807 2.29495178672717 6.226 206.607228915663 5.29608621667612 32.601 0 0 cat,chimp,cow,dog,elephant,horse,human,macaque,marmoset,mouse,opossum,orangutan,panda,platypus,rabbit,rat, lincRNA lincRNA A549@0.024263,AG04450@0,BJ@0,GM12878@0.005621,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0.025615,K562@0,MCF7@0,NHEK@0.003166,NHLF@0.004679,SKNSHRA@0.005441, 0 0 0 0 ENSG00000234635.1 ENST00000439904.1 chr10:70237755-70240521 2 1778 986 intergenic -7.40 1 0,0,0 0 0,0,0 9.00618672665917 0 22.466 20.1974128233971 0 67.396 22.0523059617548 0 64.869 0 0 chimp,human,macaque,orangutan,pig, lincRNA lincRNA A549@0.353381,AG04450@0.4252,BJ@0.40401,GM12878@0.596842,H1HESC@0.297229,HELAS3@0.418076,HEPG2@0.435347,HMEC@0.462005,HSMM@0.798456,HUVEC@0.568949,K562@0.455359,MCF7@0.192945,NHEK@0.43521,NHLF@0.768099,SKNSHRA@0.493354, 0 0 0 0 ENSG00000228088.1 ENST00000416028.1 chr10:70451421-70452698 2 347 928 exonic 1.89 0 0,0,0 0 0,0,0 643.616714697406 540.918103448276 378.615 442.4265129683 482.648706896552 292.365 397.85878962536 463.838362068966 286.293 0 0 chimp,cow,dog,elephant,guinea_pig,horse,human,macaque,marmoset,mouse,opossum,orangutan,panda,pig,platypus,rabbit,rat, antisense antisense A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0.006653,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000229261.1 ENST00000450995.1 chr10:70975089-70992246 5 1928 15221 intronic 3.94 0 0,1,0 0 0,0,0 0 3.55101504500361 76.335 19.9896265560166 14.6645424085146 118.092 23.8599585062241 14.9749687931148 113.559 0 0 chimp,cow,guinea_pig,horse,human,macaque,orangutan, lincRNA processed_transcript A549@0.0517345,AG04450@0.038657,BJ@0.033554,GM12878@0,H1HESC@0.0071725,HELAS3@0.0540975,HEPG2@0.038101,HMEC@0.027538,HSMM@0.015967,HUVEC@0,K562@0,MCF7@0.0062405,NHEK@0.0257197,NHLF@0.08143,SKNSHRA@0.0023515, 0 0 0 0 ENSG00000231748.1 ENST00000413220.1 chr10:71025098-71027904 2 432 2372 exonic -0.37 0 0,0,0 0 0,0,0 123.5 34.9776559865093 0 175.185185185185 40.2824620573356 0 171.895833333333 351.680860033727 0 0 0 cat,chimp,cow,dog,elephant,guinea_pig,horse,human,macaque,marmoset,mouse,opossum,orangutan,panda,pig, antisense antisense A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0.01257,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000236154.1 ENST00000428753.1 chr10:71335563-71336910 2 501 844 intergenic -0.50 1 0,0,1 0 0,0,0 235.508982035928 89.1113744075829 28.764 245.407185628743 92.1812796208531 20.975 244.263473053892 80.1018957345972 32.682 0 0 chimp,guinea_pig,human,macaque,marmoset,orangutan, antisense antisense A549@0.0305955,AG04450@0,BJ@0,GM12878@0.0266555,H1HESC@0.147517,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0.139522, 0 0 0 0 ENSG00000235645.1 ENST00000434931.1 chr10:71426984-71451529 7 1892 22641 intergenic 4.17 1 0,0,0 0 0,0,0 0 5.43540479660792 0 3.80972515856237 10.3394284704739 2.16 3.9154334038055 13.1461949560532 2.176 0 0 chimp,human,macaque,marmoset,orangutan, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0.0010925,HELAS3@0,HEPG2@0,HMEC@0.001346,HSMM@0,HUVEC@0,K562@0,MCF7@0.014123,NHEK@0,NHLF@0,SKNSHRA@0.0144035, 0 0 0 0 ENSG00000235645.1 ENST00000416265.1 chr10:71426992-71477999 8 3035 47958 intergenic 6.45 0 0,0,0 0 0,0,0 0 3.66524875933108 0 1.93443163097199 8.1181450435798 2.16 1.92158154859967 9.95289628424872 2.176 0 0 chimp,human,macaque,marmoset,orangutan, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0.0010925,HELAS3@0,HEPG2@0,HMEC@0.001346,HSMM@0,HUVEC@0,K562@0,MCF7@0.014123,NHEK@0,NHLF@0,SKNSHRA@0.0144035, 0 0 0 0 ENSG00000224222.1 ENST00000427247.1 chr10:71754382-71767592 3 521 12685 intergenic -3.18 1 0,0,1 0 0,0,0 0 10.1491525423729 0 0 9.34599921166732 2.232 0 8.7854158454868 2.331 0 0 chimp,human,orangutan, lincRNA lincRNA A549@0.033548,AG04450@0.033898,BJ@0,GM12878@0,H1HESC@0.003959,HELAS3@0,HEPG2@0.0083045,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0.003837,NHEK@0,NHLF@0,SKNSHRA@0.183498, 0 0 0 0 ENSG00000230620.1 ENST00000434829.1 chr10:71968555-71969331 2 495 279 exonic -4.44 0 0,0,0 0 0,0,0 140.339393939394 0 0 120.650505050505 0 0 120.183838383838 0 0 0 0 chimp,cow,dog,elephant,guinea_pig,horse,human,macaque,marmoset,mouse,orangutan,panda,pig,rabbit,rat, antisense antisense A549@0.0198885,AG04450@0,BJ@0.004869,GM12878@0.0128285,H1HESC@0,HELAS3@0,HEPG2@0.010977,HMEC@0,HSMM@0,HUVEC@0,K562@0.0142855,MCF7@0,NHEK@0.00770567,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000227918.1 ENST00000432960.1 chr10:72307689-72316552 2 310 8551 intronic 0 0 0,0,1 0 0,0,0 0 0 51.224 0 3.19354461466495 60.824 0 4.22827739445679 77.759 0 0 human,macaque,marmoset,orangutan, sense_intronic sense_intronic A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0.0227935,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0.00552333,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000246025.2 ENST00000500803.2 chr10:72370073-72428508 3 1478 56953 intergenic 5.37 0 0,0,1 0 0,0,0 0 3.28537566063245 0 0 2.74110231243306 0 0 5.04219268519657 0 0 0 NA lincRNA lincRNA A549@0,AG04450@0.15357,BJ@0.0132425,GM12878@0.0366555,H1HESC@0,HELAS3@0,HEPG2@0.0057545,HMEC@0,HSMM@0.288174,HUVEC@0,K562@0.462472,MCF7@0,NHEK@0.026643,NHLF@0.133461,SKNSHRA@0.525222, 0 0 0 0 ENSG00000233104.1 ENST00000454400.1 chr10:72577323-72577968 2 589 54 intronic -7.34 0 0,0,0 0 0,0,0 0 0 0 8.92699490662139 0 20.235 9.8981324278438 0 16.552 0 0 chimp,cow,dog,elephant,human,macaque,marmoset,orangutan,pig, sense_intronic sense_intronic A549@0.087913,AG04450@0.071504,BJ@0.030482,GM12878@0.139055,H1HESC@0.136352,HELAS3@0.196832,HEPG2@0.04593,HMEC@0,HSMM@0.004024,HUVEC@0.102707,K562@0.092096,MCF7@0.203018,NHEK@0.0654013,NHLF@0.0139155,SKNSHRA@0.11623, 0 0 0 0 ENSG00000237998.1 ENST00000448452.1 chr10:72622528-72626426 2 728 3168 intronic 0.27 0 0,0,0 0 0,0,0 0 5.65814393939394 0 4.87225274725275 7.44318181818182 4.738 8.30906593406593 7.77588383838384 4.935 0 0 chimp,human,macaque,marmoset,orangutan, antisense antisense A549@0.006757,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0.0400255,HEPG2@0.006932,HMEC@0,HSMM@0,HUVEC@0,K562@0.013458,MCF7@0.005508,NHEK@0.00533733,NHLF@0,SKNSHRA@0.0076185, 0 0 0 0 ENSG00000237047.1 ENST00000415746.1 chr10:72689682-72691814 2 1961 169 intergenic -0.99 0 0,0,0 0 0,0,0 12.0637429882713 0 0 4.73329933707292 0 7.292 4.81998980112188 0 10.476 0 0 chimp,human,macaque,orangutan, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0.0090835,HELAS3@0,HEPG2@0.0044775,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000237512.1 ENST00000449737.1 chr10:72976981-72977582 2 470 129 intronic 9.80 1 1,1,1 0 0,0,0 17.2340425531915 0 31.497 12.7468085106383 15.8139534883721 16.276 19.0957446808511 102.472868217054 22.126 0 0 chimp,elephant,horse,human,macaque,orangutan,panda, antisense antisense A549@0,AG04450@0.0358095,BJ@0.027491,GM12878@0.0119185,H1HESC@0.21488,HELAS3@0,HEPG2@0,HMEC@0.053437,HSMM@0,HUVEC@0.0167545,K562@0,MCF7@0.019902,NHEK@0.0149287,NHLF@0,SKNSHRA@0.091837, 0 0 0 0 ENSG00000237512.1 ENST00000447119.1 chr10:72976981-72977969 3 610 374 intronic -1.22 1 1,1,1 0 0,0,0 13.2786885245902 35.1470588235294 18.352 9.37049180327869 39.9679144385027 3.312 13.0950819672131 81.9144385026738 5.367 0 0 chimp,elephant,horse,human,macaque,orangutan,panda, antisense antisense A549@0,AG04450@0.0358095,BJ@0.027491,GM12878@0.0119185,H1HESC@0.21488,HELAS3@0,HEPG2@0,HMEC@0.053437,HSMM@0,HUVEC@0.0167545,K562@0,MCF7@0.019902,NHEK@0.0149287,NHLF@0,SKNSHRA@0.091837, 0 0 0 0 ENSG00000223817.1 ENST00000428918.1 chr10:73267910-73271630 3 375 3341 intronic -1.73 0 0,0,0 0 0,0,0 23.6666666666667 36.7548638132296 93.192 45.6533333333333 60.8533373241544 100.127 53.2053333333333 61.1059563005088 95.961 0 0 chimp,cow,elephant,horse,human,macaque,marmoset,orangutan,panda,pig, antisense antisense A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000230526.1 ENST00000441348.1 chr10:73638114-73638865 2 523 226 intergenic -1.50 0 0,0,1 0 0,0,0 0 0 0 0 0 0 0 0 2.115 0 0 chimp,human,macaque,marmoset,orangutan,panda, lincRNA lincRNA A549@0.64075,AG04450@0.0085385,BJ@0,GM12878@0,H1HESC@0.0212805,HELAS3@0.060254,HEPG2@0,HMEC@0.015599,HSMM@0,HUVEC@0,K562@0.0135235,MCF7@0.023498,NHEK@0.009726,NHLF@0,SKNSHRA@0.218188, 0 0 0 0 ENSG00000226163.1 ENST00000431638.1 chr10:74261504-74262714 2 160 1048 intronic -8.06 0 0,0,1 0 0,0,0 0 17.6564885496183 19.61 0 0 15.166 0 0 12.337 0 0 cat,chimp,cow,dog,elephant,horse,human,macaque,marmoset,mouse,opossum,orangutan,panda,pig,platypus,rabbit,rat, antisense antisense A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000228673.1 ENST00000443299.1 chr10:74461207-74463097 2 552 1336 intronic 2.86 0 0,0,0 0 0,0,0 0 0 14.03 0 1.29940119760479 24.26 0 1.31511976047904 33.084 0 0 chimp,human,macaque,marmoset,orangutan,panda, sense_intronic sense_intronic A549@0.15468,AG04450@0.088277,BJ@0.0728665,GM12878@0.103171,H1HESC@0.079201,HELAS3@0.081464,HEPG2@0.03191,HMEC@0,HSMM@0.00467,HUVEC@0.167754,K562@0.353568,MCF7@0.0977755,NHEK@0.0461077,NHLF@0.0047135,SKNSHRA@0.0732175, 0 0 0 0 ENSG00000237768.1 ENST00000431293.1 chr10:74831101-74833766 2 241 2422 exonic 0 0 0,1,0 0 0,0,0 84.9211618257261 42.204789430223 0 115.892116182573 55.2477291494633 5.66 116.381742738589 64.191990090834 5.9 0 0 cat,chimp,cow,dog,elephant,guinea_pig,horse,human,macaque,marmoset,orangutan,panda,pig,rabbit, antisense antisense A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000227540.1 ENST00000457147.1 chr10:75012549-75014107 2 760 796 exonic -2.96 1 1,1,1 1 0,0,0 50.6802631578947 0 77.316 44.1276315789474 16.0213567839196 138.602 44.021052631579 18.5175879396985 127.538 0 0 cat,chimp,cow,elephant,horse,human,macaque,marmoset,orangutan,panda, lincRNA processed_transcript A549@1.17427,AG04450@0.287075,BJ@0.248771,GM12878@0.931272,H1HESC@0.834831,HELAS3@3.88987,HEPG2@0.629254,HMEC@0.405402,HSMM@0.223518,HUVEC@0.226062,K562@3.47807,MCF7@1.08346,NHEK@0.417003,NHLF@0.243131,SKNSHRA@0.841273, 0 0 0 0 ENSG00000227540.1 ENST00000457758.1 chr10:75012790-75014102 3 545 763 exonic -4.75 1 0,0,1 0 0,0,0 70.6733944954129 0 0 61.5357798165138 16.7142857142857 8.127 61.3871559633027 19.3184796854522 8.043 0 0 cat,chimp,cow,dog,elephant,horse,human,macaque,marmoset,orangutan,panda,rabbit,rat, lincRNA processed_transcript A549@1.17427,AG04450@0.287075,BJ@0.248771,GM12878@0.931272,H1HESC@0.834831,HELAS3@3.88987,HEPG2@0.629254,HMEC@0.405402,HSMM@0.223518,HUVEC@0.226062,K562@3.47807,MCF7@1.08346,NHEK@0.417003,NHLF@0.243131,SKNSHRA@0.841273, 0 0 0 0 ENSG00000227540.1 ENST00000394864.2 chr10:75012927-75014107 2 633 545 exonic -4.75 1 0,0,1 0 0,0,0 60.8483412322275 0 0 52.9810426540284 23.4 8.127 52.8530805687204 27.045871559633 8.043 0 0 cat,chimp,cow,dog,guinea_pig,horse,human,macaque,marmoset,orangutan,panda,pig,rabbit, lincRNA processed_transcript A549@1.17427,AG04450@0.287075,BJ@0.248771,GM12878@0.931272,H1HESC@0.834831,HELAS3@3.88987,HEPG2@0.629254,HMEC@0.405402,HSMM@0.223518,HUVEC@0.226062,K562@3.47807,MCF7@1.08346,NHEK@0.417003,NHLF@0.243131,SKNSHRA@0.841273, 0 0 0 0 ENSG00000233144.1 ENST00000427492.1 chr10:75141191-75143254 2 399 1662 exonic 3.63 0 0,1,0 0 0,0,0 114.77694235589 17.511432009627 0 162.055137844612 30.4771359807461 0 171.786967418546 31.5306859205776 0 0 0 chimp,dog,elephant,guinea_pig,horse,human,macaque,marmoset,mouse,opossum,orangutan,panda,pig,platypus,rabbit,rat, antisense antisense A549@0.016821,AG04450@0,BJ@0.0061395,GM12878@0.010054,H1HESC@0,HELAS3@0,HEPG2@0.0054255,HMEC@0,HSMM@0,HUVEC@0,K562@0.029955,MCF7@0,NHEK@0.0275837,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000221817.2 ENST00000422977.1 chr10:75255283-75256536 2 928 323 exonic 4.11 0 0,0,0 0 0,0,0 63.1314655172414 415.015479876161 0 117.543103448276 420.396284829721 44.129 119.598060344828 400.195046439628 44.189 0 0 chimp,cow,dog,human,macaque,marmoset,panda,pig,rabbit, antisense antisense A549@1.44678,AG04450@0.99527,BJ@1.10189,GM12878@0.847969,H1HESC@0.0639525,HELAS3@1.86889,HEPG2@0.774733,HMEC@0.699146,HSMM@0.648718,HUVEC@0.50155,K562@0.769786,MCF7@0.98782,NHEK@0.661749,NHLF@1.20523,SKNSHRA@1.08313, 0 0 0 0 ENSG00000221817.2 ENST00000442133.1 chr10:75256041-75264940 4 758 8135 exonic -0.22 0 0,1,0 0 0,0,0 150.597625329815 69.6569145666871 181.142 122.060686015831 73.6491702519975 275.916 124.970976253298 71.0222495390289 260.36 0 0 chimp,human,macaque,marmoset,orangutan,pig, antisense antisense A549@1.44678,AG04450@0.99527,BJ@1.10189,GM12878@0.847969,H1HESC@0.0639525,HELAS3@1.86889,HEPG2@0.774733,HMEC@0.699146,HSMM@0.648718,HUVEC@0.50155,K562@0.769786,MCF7@0.98782,NHEK@0.661749,NHLF@1.20523,SKNSHRA@1.08313, 0 0 0 0 ENSG00000221817.2 ENST00000439792.1 chr10:75258314-75259585 2 543 726 exonic -7.87 1 0,0,1 0 0,0,0 38.0662983425414 219.833333333333 175.958 106.029465930018 480.848484848485 121.747 86.1804788213628 184.801652892562 113.67 0 0 chimp,elephant,horse,human,macaque,marmoset,mouse,orangutan, antisense antisense A549@1.44678,AG04450@0.99527,BJ@1.10189,GM12878@0.847969,H1HESC@0.0639525,HELAS3@1.86889,HEPG2@0.774733,HMEC@0.699146,HSMM@0.648718,HUVEC@0.50155,K562@0.769786,MCF7@0.98782,NHEK@0.661749,NHLF@1.20523,SKNSHRA@1.08313, 0 0 0 0 ENSG00000234606.1 ENST00000415661.1 chr10:75413858-75434477 3 438 20177 exonic 1.51 0 0,1,1 0 0,0,0 140.216894977169 5.59176289834961 213.662 215.260273972603 17.2615354116073 272.475 424.091324200913 22.6220944639937 183.389 0 0 chimp,cow,guinea_pig,horse,human,macaque,mouse,pig,platypus, antisense antisense A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0.0131985,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0.0258455,HUVEC@0.018166,K562@0.005265,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0.539246, 54 3 33 3 ENSG00000242288.3 ENST00000415917.1 chr10:75463983-75473267 3 538 8742 intergenic 0.12 0 0,0,1 0 0,1,0 0 0 0 0 1.14321665522764 0 0 15.278082818577 0 0 0 chimp,cow,human,macaque,marmoset,orangutan,pig, processed_transcript processed_transcript A549@1.26221,AG04450@0.914848,BJ@0.685849,GM12878@2.04943,H1HESC@0.998936,HELAS3@1.6374,HEPG2@1.58675,HMEC@0.688588,HSMM@0.850318,HUVEC@1.08791,K562@4.15503,MCF7@1.37382,NHEK@1.2208,NHLF@0.585804,SKNSHRA@1.5997, 147 2 94 2 ENSG00000242288.3 ENST00000449532.2 chr10:75478936-75490272 8 1123 10199 intergenic 1.61 0 0,1,1 1 0,1,0 0 0 0 298.137132680321 30.8755760368664 0 551.325912733749 37.7511520737327 302.445 0 0 cat,chimp,cow,dog,elephant,guinea_pig,horse,human,macaque,marmoset,mouse,opossum,orangutan,panda,pig,platypus,rabbit,rat, processed_transcript processed_transcript A549@1.26221,AG04450@0.914848,BJ@0.685849,GM12878@2.04943,H1HESC@0.998936,HELAS3@1.6374,HEPG2@1.58675,HMEC@0.688588,HSMM@0.850318,HUVEC@1.08791,K562@4.15503,MCF7@1.37382,NHEK@1.2208,NHLF@0.585804,SKNSHRA@1.5997, 0 0 0 0 ENSG00000236370.1 ENST00000456638.1 chr10:75556276-75561157 4 1452 3423 exonic 5.59 0 0,1,1 0 0,0,0 427.981404958678 325.002921413964 381.993 460.542699724518 359.555945077417 393.723 445.651515151515 319.591294186386 339.388 0 0 cat,chimp,cow,dog,elephant,guinea_pig,horse,human,macaque,marmoset,opossum,orangutan,panda,pig,rabbit, antisense antisense A549@0.943909,AG04450@0.28851,BJ@0.345023,GM12878@2.14557,H1HESC@1.81904,HELAS3@1.26975,HEPG2@1.70549,HMEC@0.247477,HSMM@0.45179,HUVEC@0.930948,K562@1.22523,MCF7@1.00307,NHEK@0.428444,NHLF@0.150821,SKNSHRA@0.854768, 0 0 0 0 ENSG00000224195.1 ENST00000434147.1 chr10:75573276-75574495 2 443 774 exonic 5.43 1 0,1,0 0 0,0,0 191.471783295711 388.351421188631 594.892 244.257336343115 467.751937984496 523.395 257.182844243792 460.636950904393 496.147 0 0 cat,chimp,cow,dog,guinea_pig,horse,human,macaque,marmoset,mouse,opossum,orangutan,panda,pig,rabbit,rat, antisense antisense A549@0,AG04450@0.0066525,BJ@0.0164085,GM12878@0.0131435,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0.0050985, 0 0 0 0 ENSG00000229990.1 ENST00000446730.1 chr10:75601591-75606370 2 361 4416 intronic 0.06 0 0,0,0 0 0,0,0 0 15.161231884058 45.25 0 21.7126358695652 21.106 0 22.3263134057971 20.355 0 0 cat,dog,elephant,horse,human,macaque,marmoset,orangutan,panda,pig, antisense antisense A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0.011499,HEPG2@0.011739,HMEC@0,HSMM@0,HUVEC@0,K562@0.0075085,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000225761.1 ENST00000416076.1 chr10:75764895-75787673 2 440 22336 intronic -6.26 0 0,0,0 0 0,0,0 0 22.5945558739255 22.466 8.14772727272727 20.9793159025788 0 12.1431818181818 22.3698961318052 7.015 0 0 chimp,dog,elephant,guinea_pig,horse,human,macaque,marmoset,mouse,orangutan,panda,pig,rat, sense_intronic sense_intronic A549@0.0108335,AG04450@0.054706,BJ@0.0410895,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0.006593,HUVEC@0,K562@0.0297375,MCF7@0,NHEK@0.00778867,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000226458.1 ENST00000426210.1 chr10:75788171-75789962 2 939 850 intronic -4.29 0 0,0,0 0 0,0,0 0 0 0 10.751863684771 0 3.585 11.2406815761448 0 3.885 0 0 cat,chimp,cow,dog,elephant,horse,human,macaque,marmoset,mouse,orangutan,panda,pig,rabbit, sense_intronic sense_intronic A549@0.272806,AG04450@0.231423,BJ@0.113677,GM12878@0.034028,H1HESC@0.618021,HELAS3@0.097097,HEPG2@0.183306,HMEC@0,HSMM@0.007051,HUVEC@0.853163,K562@1.08756,MCF7@0.0131065,NHEK@0.315542,NHLF@0.0179075,SKNSHRA@0.0869165, 0 0 0 0 ENSG00000228726.1 ENST00000452836.1 chr10:75855924-75862185 2 358 5901 intronic -16.72 0 0,0,0 0 0,0,0 0 20.1226910693103 12.76 5.69832402234637 28.8542619894933 0 8.14245810055866 34.7407219115404 0 0 0 chimp,human,macaque,marmoset,orangutan, antisense antisense A549@0.0060295,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0.017755,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000227539.1 ENST00000430363.1 chr10:76185995-76186461 2 411 53 intronic -3.02 0 0,0,0 0 0,0,0 0 0 7.04 0 0 29.943 0 0 32.061 0 0 chimp,human,macaque,marmoset,orangutan, sense_intronic sense_intronic A549@0,AG04450@0,BJ@0.010947,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0.0153765,HMEC@0,HSMM@0,HUVEC@0.0102225,K562@0.0328535,MCF7@0.006712,NHEK@0.0769127,NHLF@0,SKNSHRA@0.012204, 0 0 0 0 ENSG00000232342.1 ENST00000448214.1 chr10:76266273-76287606 4 290 21037 intronic -5.79 0 0,0,0 0 0,0,0 0 23.5118600560916 0 0 26.8123781908067 0 38.5448275862069 27.5381946094976 167.857 0 0 chimp,human,macaque,marmoset,orangutan, antisense antisense A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000234149.1 ENST00000413431.1 chr10:76762813-76784932 2 187 21930 exonic -1.83 0 0,0,0 0 0,0,0 264.641711229947 130.780072959416 50.316 245.390374331551 105.654217966256 61.184 134.475935828877 96.1238030095759 37.795 0 0 cat,chimp,cow,dog,elephant,horse,human,macaque,marmoset,mouse,orangutan,pig,rabbit, antisense antisense A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000227186.1 ENST00000436608.1 chr10:76783233-76784009 2 378 396 intronic -0.70 0 0,0,0 0 0,0,0 0 0 335.071 0 9.01515151515152 331.215 0 9.61616161616162 259.237 0 0 chimp,horse,human,macaque,marmoset,orangutan, antisense antisense A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000226051.2 ENST00000524517.1 chr10:77029577-77118465 6 784 88094 intergenic -1.87 0 0,0,0 0 0,0,0 117.795918367347 17.840238835789 0 94.593112244898 23.695938429405 24.306 92.2602040816327 27.5252684632325 91.107 0 0 chimp,elephant,guinea_pig,horse,human,macaque,marmoset,mouse,orangutan,panda,pig,rat, antisense antisense A549@0.001485,AG04450@0.052667,BJ@0.0026245,GM12878@0.021392,H1HESC@0.0013305,HELAS3@0.002244,HEPG2@0.017499,HMEC@0,HSMM@0.025531,HUVEC@0,K562@0.006722,MCF7@0.0065835,NHEK@0.0462923,NHLF@0.040784,SKNSHRA@0, 0 0 0 0 ENSG00000226051.2 ENST00000530606.1 chr10:77033055-77118366 4 545 84760 intergenic -9.74 0 0,0,1 0 0,0,0 334.515596330275 16.8267461066541 38.989 333.565137614679 21.9925554506843 64.769 356.078899082569 25.908459178858 54.485 0 0 cat,chimp,cow,dog,guinea_pig,horse,human,macaque,marmoset,mouse,opossum,orangutan,panda,pig,platypus,rat, antisense antisense A549@0.001485,AG04450@0.052667,BJ@0.0026245,GM12878@0.021392,H1HESC@0.0013305,HELAS3@0.002244,HEPG2@0.017499,HMEC@0,HSMM@0.025531,HUVEC@0,K562@0.006722,MCF7@0.0065835,NHEK@0.0462923,NHLF@0.040784,SKNSHRA@0, 0 0 0 0 ENSG00000226051.2 ENST00000531808.1 chr10:77043559-77133258 3 572 89123 intergenic -8.35 0 0,0,0 0 0,0,0 339.188811188811 22.0992897456324 101.897 363.868881118881 26.0747955073326 140.285 400.659090909091 29.4612165209879 159.883 0 0 cat,chimp,cow,dog,elephant,guinea_pig,horse,human,macaque,marmoset,mouse,opossum,orangutan,panda,pig,rabbit,rat, antisense antisense A549@0.001485,AG04450@0.052667,BJ@0.0026245,GM12878@0.021392,H1HESC@0.0013305,HELAS3@0.002244,HEPG2@0.017499,HMEC@0,HSMM@0.025531,HUVEC@0,K562@0.006722,MCF7@0.0065835,NHEK@0.0462923,NHLF@0.040784,SKNSHRA@0, 0 0 0 0 ENSG00000226051.2 ENST00000528121.1 chr10:77056141-77120657 3 743 63769 intergenic -1.66 0 0,1,0 0 0,0,0 68.5222072678331 9.72458404553937 488.911 35.742934051144 13.0786118646992 509.396 37.4091520861373 15.1056783076416 580.23 0 0 cat,chimp,dog,elephant,horse,human,macaque,mouse,orangutan, antisense antisense A549@0.001485,AG04450@0.052667,BJ@0.0026245,GM12878@0.021392,H1HESC@0.0013305,HELAS3@0.002244,HEPG2@0.017499,HMEC@0,HSMM@0.025531,HUVEC@0,K562@0.006722,MCF7@0.0065835,NHEK@0.0462923,NHLF@0.040784,SKNSHRA@0, 0 0 0 0 ENSG00000226051.2 ENST00000416398.1 chr10:77056148-77121436 3 1857 63427 intergenic -1.66 1 1,1,1 0 0,0,0 27.4162627894453 9.77701925047693 484.242 21.21647819063 12.9402462673625 506.883 26.8922994076467 14.8309079729453 577.409 0 0 cat,chimp,cow,dog,elephant,horse,human,macaque,orangutan, antisense antisense A549@0.001485,AG04450@0.052667,BJ@0.0026245,GM12878@0.021392,H1HESC@0.0013305,HELAS3@0.002244,HEPG2@0.017499,HMEC@0,HSMM@0.025531,HUVEC@0,K562@0.006722,MCF7@0.0065835,NHEK@0.0462923,NHLF@0.040784,SKNSHRA@0, 0 0 0 0 ENSG00000226051.2 ENST00000526759.1 chr10:77056187-77120447 4 597 63657 intergenic -1.66 0 0,1,0 0 0,0,0 85.2797319932998 9.74169376502191 458.229 59.6197654941373 12.9478454843929 497.637 77.2747068676717 14.8316760136356 565.798 0 0 cat,chimp,dog,elephant,human,macaque,orangutan,panda,rabbit, antisense antisense A549@0.001485,AG04450@0.052667,BJ@0.0026245,GM12878@0.021392,H1HESC@0.0013305,HELAS3@0.002244,HEPG2@0.017499,HMEC@0,HSMM@0.025531,HUVEC@0,K562@0.006722,MCF7@0.0065835,NHEK@0.0462923,NHLF@0.040784,SKNSHRA@0, 0 0 0 0 ENSG00000226051.2 ENST00000533822.1 chr10:77056255-77120562 4 656 63645 intergenic -9.11 0 0,1,1 0 0,0,0 77.609756097561 9.74353052085788 412.873 40.4832317073171 13.1040930159478 444.053 42.3704268292683 15.135108806662 508.406 0 0 chimp,horse,human,macaque,marmoset,orangutan, antisense antisense A549@0.001485,AG04450@0.052667,BJ@0.0026245,GM12878@0.021392,H1HESC@0.0013305,HELAS3@0.002244,HEPG2@0.017499,HMEC@0,HSMM@0.025531,HUVEC@0,K562@0.006722,MCF7@0.0065835,NHEK@0.0462923,NHLF@0.040784,SKNSHRA@0, 0 0 0 0 ENSG00000236842.1 ENST00000427610.1 chr10:77190329-77191346 2 258 757 exonic 0 0 0,1,1 0 0,0,0 0 0 0 0 4.49141347424042 32.376 0 8.81505944517833 33.478 0 0 chimp,horse,human,macaque,marmoset,orangutan, antisense antisense A549@0.117508,AG04450@0,BJ@0.0093075,GM12878@0,H1HESC@0,HELAS3@0.170509,HEPG2@0.310351,HMEC@0,HSMM@0,HUVEC@0.0102705,K562@0,MCF7@0.0077325,NHEK@0,NHLF@0,SKNSHRA@0.0689745, 0 0 0 0 ENSG00000228280.1 ENST00000445111.1 chr10:77502498-77503513 2 432 581 intronic -3.52 0 0,0,0 0 0,0,0 120.074074074074 42.6144578313253 0 212.178240740741 95.7074010327022 0 205.388888888889 99.4096385542169 0 0 0 chimp,cow,elephant,human,macaque,marmoset,orangutan,panda,pig,platypus, sense_intronic sense_intronic A549@0.0048125,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0.0272595,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0.0011625, 0 0 0 0 ENSG00000232704.1 ENST00000423541.1 chr10:78042428-78044842 2 460 1952 intronic -1.13 0 0,1,0 0 0,0,0 302.060869565217 0 239.397 340.923913043478 6.07735655737705 200.921 333.480434782609 8.16086065573771 212.268 0 0 cat,chimp,cow,dog,elephant,guinea_pig,horse,human,macaque,marmoset,mouse,opossum,orangutan,panda,pig,rabbit,rat, antisense antisense A549@0,AG04450@0.0048515,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000230575.1 ENST00000412137.1 chr10:78197166-78198533 2 379 986 intronic -3.34 0 0,1,0 0 0,0,0 398.335092348285 166.679513184584 105.219 480.878627968338 167.809330628803 68.214 419.176781002639 85.6501014198783 60.133 0 0 cat,chimp,cow,dog,elephant,guinea_pig,horse,human,macaque,marmoset,mouse,opossum,orangutan,panda,pig,rabbit, antisense antisense A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000236467.1 ENST00000429850.1 chr10:78647802-78663848 2 2523 13521 intronic 2.50 1 0,0,0 0 0,0,0 37.0114942528736 19.4482656608239 301.938 70.906460562822 28.7154056652614 331.259 73.0281411018629 32.796168922417 313.876 0 0 chimp,elephant,guinea_pig,horse,human,macaque,marmoset,orangutan, antisense antisense A549@0,AG04450@0.0017755,BJ@0.005668,GM12878@0.0053095,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0.0027685,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000227323.1 ENST00000426234.1 chr10:78664583-78709221 3 474 44160 exonic 7.48 0 0,0,0 0 0,0,0 279.73417721519 82.5355298913043 0 248.092827004219 95.3734148550724 0 247.417721518987 96.2017663043478 1.88 0 0 cat,chimp,cow,dog,elephant,guinea_pig,horse,human,macaque,marmoset,mouse,orangutan,panda,pig,rabbit,rat, antisense antisense A549@0,AG04450@0,BJ@0.007501,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000226911.1 ENST00000458661.1 chr10:78737456-78738351 2 257 636 intronic 0 1 0,0,0 0 0,0,0 175.525291828794 474.455974842767 0 141.727626459144 536.569182389937 4.902 113.700389105058 530.254716981132 1.506 0 0 chimp,dog,guinea_pig,horse,human,macaque,marmoset,mouse,orangutan,panda,rabbit,rat, antisense antisense A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000225497.1 ENST00000428936.1 chr10:78907410-78909858 2 425 2021 intronic 2.36 0 0,0,0 0 0,0,0 0 59.2756061355764 0 41.3647058823529 32.0455220188026 0 79.4258823529412 32.6620484908461 2.673 0 0 cat,chimp,cow,dog,elephant,guinea_pig,horse,human,macaque,marmoset,orangutan,panda,pig,rat, antisense antisense A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000225497.1 ENST00000430464.1 chr10:78908050-78909858 2 288 1518 intronic 2.36 0 0,0,0 0 0,0,0 45.0104166666667 37.102766798419 49.617 68.4583333333333 24.2852437417655 24.749 110.013888888889 25.298418972332 31.356 0 0 cat,chimp,cow,dog,elephant,horse,human,macaque,marmoset,mouse,orangutan,panda,pig,platypus,rat, antisense antisense A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000224500.1 ENST00000413564.1 chr10:79073699-79075452 2 416 1335 intronic 1.18 1 0,0,0 0 0,0,0 176.153846153846 33.6741573033708 0 248.103365384615 1.91011235955056 0 248.370192307692 3.52808988764045 4.051 0 0 cat,chimp,cow,dog,elephant,guinea_pig,horse,human,macaque,marmoset,orangutan,panda,pig,rabbit,rat, antisense antisense A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000225652.1 ENST00000418515.1 chr10:79114162-79136371 5 696 21505 intronic -1.77 0 0,1,0 0 0,0,0 0 14.2931411299698 30.277 0 17.6545454545455 17.356 0 18.3924203673564 24.217 0 0 chimp,human,macaque,marmoset,orangutan, antisense antisense A549@0.004811,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000228748.1 ENST00000434097.1 chr10:79542624-79551665 2 757 8282 exonic 2.25 0 0,0,0 0 0,0,0 0 31.290026563632 0 3.88771466314399 23.0620623037914 9.57 4.56142668428005 23.2876116879981 26.052 0 0 chimp,horse,human,macaque,marmoset,orangutan, antisense antisense A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0.0065675,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000233871.1 ENST00000449852.1 chr10:79687130-79689582 2 485 1965 intergenic 4.12 0 0,1,1 0 0,0,0 0 0 142.104 0 2.24732824427481 264.338 0 3.17964376590331 246.098 0 0 chimp,cow,dog,elephant,horse,human,macaque,marmoset,panda,pig, antisense antisense A549@0.324431,AG04450@0.283112,BJ@0.194489,GM12878@0.0225625,H1HESC@0.206359,HELAS3@0.11273,HEPG2@0.1121,HMEC@0.134526,HSMM@0.0804195,HUVEC@0.055518,K562@0.194641,MCF7@0.585277,NHEK@0.045505,NHLF@0.161386,SKNSHRA@0.47258, 0 0 0 0 ENSG00000230417.4 ENST00000429250.2 chr10:80008497-80310446 4 603 301340 intergenic 1.89 0 0,1,0 0 0,0,0 232.44776119403 22.907675715139 0 164.260364842454 22.7925068029468 3.224 168.283582089552 24.0635229309086 3.327 0 0 cat,chimp,dog,elephant,horse,human,marmoset,mouse,orangutan,rat, lincRNA processed_transcript A549@0.0585055,AG04450@0.347878,BJ@0.178982,GM12878@0.005032,H1HESC@0.031516,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0.212929,HUVEC@0.0067945,K562@0.004772,MCF7@0.004505,NHEK@0.0216787,NHLF@4.47326,SKNSHRA@0.121904, 0 0 0 0 ENSG00000230417.4 ENST00000546103.1 chr10:80008497-80311112 5 1262 301345 intergenic 3.77 0 0,1,0 0 0,0,0 121.183042789223 23.0224891735387 0 61.1600633914422 22.8718711111848 3.224 62.9421553090333 24.1491678972606 3.327 0 0 chimp,horse,human,macaque,marmoset,opossum,orangutan, lincRNA processed_transcript A549@0.0585055,AG04450@0.347878,BJ@0.178982,GM12878@0.005032,H1HESC@0.031516,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0.212929,HUVEC@0.0067945,K562@0.004772,MCF7@0.004505,NHEK@0.0216787,NHLF@4.47326,SKNSHRA@0.121904, 0 0 0 0 ENSG00000230417.4 ENST00000434974.1 chr10:80008505-80012402 2 2690 1205 intergenic 8.64 1 0,1,0 0 0,0,0 79.942750929368 215.297925311203 0 64.6081784386617 116.578423236515 3.224 68.0379182156134 121.953526970954 3.327 0 0 chimp,human,macaque,marmoset,orangutan, lincRNA processed_transcript A549@0.0585055,AG04450@0.347878,BJ@0.178982,GM12878@0.005032,H1HESC@0.031516,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0.212929,HUVEC@0.0067945,K562@0.004772,MCF7@0.004505,NHEK@0.0216787,NHLF@4.47326,SKNSHRA@0.121904, 0 0 0 0 ENSG00000230417.4 ENST00000423770.1 chr10:80008565-80010208 2 436 1205 intergenic -3.42 0 0,0,0 0 0,0,0 294.02752293578 215.297925311203 11.628 215.685779816514 116.578423236515 7.958 228.942660550459 121.953526970954 4.699 0 0 cat,chimp,cow,horse,human,macaque,marmoset,orangutan, lincRNA processed_transcript A549@0.0585055,AG04450@0.347878,BJ@0.178982,GM12878@0.005032,H1HESC@0.031516,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0.212929,HUVEC@0.0067945,K562@0.004772,MCF7@0.004505,NHEK@0.0216787,NHLF@4.47326,SKNSHRA@0.121904, 0 0 0 0 ENSG00000230417.4 ENST00000432742.1 chr10:80008565-80113093 3 680 103844 intergenic 11.74 1 0,0,1 0 0,0,0 188.523529411765 25.0442972150534 11.628 138.292647058824 23.0084164708601 7.958 146.792647058824 23.4030468780093 4.699 0 0 cat,chimp,elephant,guinea_pig,horse,human,macaque,orangutan,rabbit, lincRNA processed_transcript A549@0.0585055,AG04450@0.347878,BJ@0.178982,GM12878@0.005032,H1HESC@0.031516,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0.212929,HUVEC@0.0067945,K562@0.004772,MCF7@0.004505,NHEK@0.0216787,NHLF@4.47326,SKNSHRA@0.121904, 0 0 0 0 ENSG00000227136.2 ENST00000415959.1 chr10:80027085-80037822 3 381 10352 intergenic 0 0 0,1,0 0 0,1,0 8.96062992125984 40.5571870170015 0 116.535433070866 38.2062403400309 3.585 0 37.7341576506955 3.263 0 0 cat,chimp,dog,human,macaque,marmoset,orangutan, lincRNA lincRNA A549@0.013951,AG04450@0.0221725,BJ@0.0335385,GM12878@0,H1HESC@0.0292015,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0.290449,HUVEC@0,K562@0.0029935,MCF7@0.005204,NHEK@0.002888,NHLF@0.492329,SKNSHRA@0.276138, 0 0 0 0 ENSG00000227136.2 ENST00000461034.1 chr10:80027136-80061803 2 802 33863 intergenic 0 0 0,1,0 0 0,1,0 0 38.4418982370138 0 0 36.2322003366506 3.585 6.96882793017456 36.238195080176 3.263 0 0 chimp,horse,human,macaque,marmoset,orangutan,panda, lincRNA lincRNA A549@0.013951,AG04450@0.0221725,BJ@0.0335385,GM12878@0,H1HESC@0.0292015,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0.290449,HUVEC@0,K562@0.0029935,MCF7@0.005204,NHEK@0.002888,NHLF@0.492329,SKNSHRA@0.276138, 0 0 0 0 ENSG00000227136.2 ENST00000476909.1 chr10:80027167-80039970 3 789 12010 intergenic -1.19 1 1,1,1 0 0,1,0 113.011406844106 35.2898417985013 0 169.027883396705 32.956786011657 3.585 173.842839036755 32.5248959200666 3.263 0 0 cat,chimp,dog,elephant,human,macaque,marmoset,orangutan,panda,rabbit, lincRNA lincRNA A549@0.013951,AG04450@0.0221725,BJ@0.0335385,GM12878@0,H1HESC@0.0292015,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0.290449,HUVEC@0,K562@0.0029935,MCF7@0.005204,NHEK@0.002888,NHLF@0.492329,SKNSHRA@0.276138, 0 0 0 0 ENSG00000227136.2 ENST00000459633.1 chr10:80027199-80090352 2 546 62605 intergenic 4.88 0 0,0,0 0 0,1,0 0 29.1562974203338 0 0 25.7421132497405 3.585 0 26.1432473444613 3.263 0 0 cat,chimp,dog,horse,human,macaque,marmoset,orangutan,panda, lincRNA lincRNA A549@0.013951,AG04450@0.0221725,BJ@0.0335385,GM12878@0,H1HESC@0.0292015,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0.290449,HUVEC@0,K562@0.0029935,MCF7@0.005204,NHEK@0.002888,NHLF@0.492329,SKNSHRA@0.276138, 0 0 0 0 ENSG00000229543.1 ENST00000434440.1 chr10:80053599-80060760 2 518 6641 intergenic -0.18 0 0,0,0 0 0,0,0 0 7.35807860262009 59.248 0 7.81282939316368 98.102 0 9.31787381418461 95.115 0 0 chimp,dog,horse,human,macaque,marmoset,orangutan,panda,rabbit, lincRNA lincRNA A549@0.008614,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0.0055875,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0.231355, 0 0 0 0 ENSG00000230229.1 ENST00000416341.1 chr10:80112354-80115857 2 379 3122 intergenic -3.85 0 0,0,0 0 0,0,0 0 0 0 21.3720316622691 8.59288917360666 0 22.4802110817942 14.5179372197309 0 0 0 chimp,human,macaque,marmoset,orangutan, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000230417.4 ENST00000510550.1 chr10:80166301-80310614 4 591 143716 intergenic 3.77 0 0,0,1 0 0,0,0 0 17.6416543739041 7.36 0 17.6903406718807 11.785 0 18.8738205906093 11.767 0 0 chimp,horse,human,macaque,marmoset,orangutan, lincRNA processed_transcript A549@0.0585055,AG04450@0.347878,BJ@0.178982,GM12878@0.005032,H1HESC@0.031516,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0.212929,HUVEC@0.0067945,K562@0.004772,MCF7@0.004505,NHEK@0.0216787,NHLF@4.47326,SKNSHRA@0.121904, 0 0 0 0 ENSG00000230417.4 ENST00000421324.1 chr10:80288508-80434724 2 341 145873 intergenic 5.80 1 0,0,0 0 0,0,0 0 30.5831922288566 0 0 27.0865753086589 0 0 27.8487451413216 0 0 0 chimp,human,macaque,marmoset,orangutan, lincRNA processed_transcript A549@0.0585055,AG04450@0.347878,BJ@0.178982,GM12878@0.005032,H1HESC@0.031516,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0.212929,HUVEC@0.0067945,K562@0.004772,MCF7@0.004505,NHEK@0.0216787,NHLF@4.47326,SKNSHRA@0.121904, 0 0 0 0 ENSG00000228683.1 ENST00000455498.1 chr10:80455819-80456779 2 577 381 intergenic -3.42 0 0,1,0 0 0,0,0 0 0 6.692 0 0 76.966 0 0 76.336 0 0 chimp,dog,horse,human,macaque,marmoset,orangutan, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0.0284085,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000224596.1 ENST00000428862.1 chr10:80703085-80722151 4 2847 16213 intergenic 2.54 1 0,0,1 0 0,0,0 1.41131015103618 23.4189230864121 0 4.16051984545135 28.9360389810646 0 5.53143659992975 28.5402454820206 0 0 0 chimp,human,macaque,marmoset, lincRNA processed_transcript A549@0.137969,AG04450@0.202516,BJ@0.328819,GM12878@0.0405495,H1HESC@0.0398425,HELAS3@0.62701,HEPG2@1.21156,HMEC@0.05297,HSMM@0.232273,HUVEC@0.0674365,K562@0.111012,MCF7@0.076313,NHEK@0.00403767,NHLF@0.110728,SKNSHRA@0.421134, 0 0 0 0 ENSG00000224596.1 ENST00000456353.1 chr10:80703085-80827652 10 2868 121681 intergenic -0.45 1 0,1,1 0 0,0,0 18.0753138075314 21.037787329164 32.175 19.0596234309623 21.7010708327512 38.56 18.5836820083682 22.9494580090565 43.456 0 0 chimp,horse,human,macaque,marmoset,orangutan, lincRNA processed_transcript A549@0.137969,AG04450@0.202516,BJ@0.328819,GM12878@0.0405495,H1HESC@0.0398425,HELAS3@0.62701,HEPG2@1.21156,HMEC@0.05297,HSMM@0.232273,HUVEC@0.0674365,K562@0.111012,MCF7@0.076313,NHEK@0.00403767,NHLF@0.110728,SKNSHRA@0.421134, 0 0 0 0 ENSG00000229569.1 ENST00000427035.1 chr10:80760241-80763560 2 2016 1301 intergenic 4.22 0 0,1,0 0 0,0,0 3.41765873015873 0 15.37 15.7058531746032 0 7.225 14.4017857142857 0 5.103 0 0 chimp,human,macaque,orangutan, lincRNA lincRNA A549@0.005115,AG04450@0.006369,BJ@0,GM12878@0,H1HESC@0.002755,HELAS3@0.003992,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0.0130445,K562@0.0014685,MCF7@0.061434,NHEK@0.000461333,NHLF@0.026165,SKNSHRA@0.018083, 0 0 0 0 ENSG00000224596.1 ENST00000440151.1 chr10:80803905-80827225 5 809 22503 intergenic 3.65 0 0,1,0 0 0,0,0 29.5920889987639 22.0791894414078 24.319 55.9901112484549 22.5346842643203 11.573 57.1866501854141 23.742612096165 9.366 0 0 cat,chimp,cow,dog,guinea_pig,horse,human,macaque,marmoset,orangutan,pig, lincRNA processed_transcript A549@0.137969,AG04450@0.202516,BJ@0.328819,GM12878@0.0405495,H1HESC@0.0398425,HELAS3@0.62701,HEPG2@1.21156,HMEC@0.05297,HSMM@0.232273,HUVEC@0.0674365,K562@0.111012,MCF7@0.076313,NHEK@0.00403767,NHLF@0.110728,SKNSHRA@0.421134, 0 0 0 0 ENSG00000224596.1 ENST00000455378.1 chr10:80815781-80828817 4 377 12653 exonic -1.42 0 0,1,0 0 0,0,0 157.480106100796 29.7356358175927 143.983 240.745358090186 35.7986248320556 150.624 238.371352785146 37.2082510076662 178.541 0 0 chimp,cow,dog,guinea_pig,horse,human,macaque,marmoset,orangutan,panda,pig,rabbit, lincRNA processed_transcript A549@0.137969,AG04450@0.202516,BJ@0.328819,GM12878@0.0405495,H1HESC@0.0398425,HELAS3@0.62701,HEPG2@1.21156,HMEC@0.05297,HSMM@0.232273,HUVEC@0.0674365,K562@0.111012,MCF7@0.076313,NHEK@0.00403767,NHLF@0.110728,SKNSHRA@0.421134, 0 0 0 0 ENSG00000235426.1 ENST00000438554.1 chr10:81142084-81169030 2 504 26440 exonic -1.37 0 0,1,1 0 0,0,0 103.674603174603 46.7820726172466 21.722 127.396825396825 36.3090771558245 22.391 144.696428571429 39.3887670196672 26.705 0 0 cow,guinea_pig,horse,human,macaque,marmoset,mouse,orangutan, antisense antisense A549@0,AG04450@0,BJ@0.019296,GM12878@0,H1HESC@0,HELAS3@0.049495,HEPG2@0.0559725,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000241317.1 ENST00000456546.1 chr10:81263829-81266037 2 331 1875 intergenic 0 0 0,0,1 0 0,0,0 0 0 0 0 0 0 61.1359516616314 13.7813333333333 103.446 0 0 chimp,human,macaque,marmoset,orangutan, processed_transcript processed_transcript A549@0,AG04450@0,BJ@0.007267,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000226676.1 ENST00000429070.1 chr10:81388513-81391944 3 603 2824 intergenic 1.21 1 0,0,0 0 0,0,0 0 0 0 0 0 0 216.771144278607 271.275495750708 134.393 0 0 chimp,human,macaque,marmoset,orangutan, lincRNA lincRNA A549@0.016696,AG04450@0,BJ@0.005904,GM12878@0.004382,H1HESC@0.0048025,HELAS3@0.0344395,HEPG2@0.052407,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0.0358085, 0 0 0 0 ENSG00000226676.1 ENST00000421256.1 chr10:81390511-81391942 2 383 1046 intergenic 1.21 0 0,0,0 0 0,0,0 0 0 0 0 0 0 410.639686684073 699 134.393 0 0 chimp,human,macaque,marmoset,orangutan, lincRNA lincRNA A549@0.016696,AG04450@0,BJ@0.005904,GM12878@0.004382,H1HESC@0.0048025,HELAS3@0.0344395,HEPG2@0.052407,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0.0358085, 0 0 0 0 ENSG00000244733.1 ENST00000479920.1 chr10:81420645-81430911 4 444 9816 intergenic 0 0 0,1,0 0 0,0,0 0 0 0 0 3.23991442542787 0 0 4.19254278728606 0 0 0 chimp,cow,horse,human,macaque,marmoset,orangutan, lincRNA lincRNA A549@0.440881,AG04450@0.216543,BJ@0.352451,GM12878@0.612958,H1HESC@0.338851,HELAS3@0.781772,HEPG2@0.229851,HMEC@0.196019,HSMM@0.260806,HUVEC@0.37707,K562@1.17952,MCF7@0.534389,NHEK@0.686098,NHLF@0.378235,SKNSHRA@0.17742, 44 3 26 3 ENSG00000244733.1 ENST00000482985.1 chr10:81420645-81436855 5 935 15267 intergenic -11.78 0 0,1,0 0 0,0,0 0 0 0 0 2.08312045588524 0 0 2.695617999607 0 0 0 chimp,human,macaque,marmoset,orangutan, lincRNA lincRNA A549@0.440881,AG04450@0.216543,BJ@0.352451,GM12878@0.612958,H1HESC@0.338851,HELAS3@0.781772,HEPG2@0.229851,HMEC@0.196019,HSMM@0.260806,HUVEC@0.37707,K562@1.17952,MCF7@0.534389,NHEK@0.686098,NHLF@0.378235,SKNSHRA@0.17742, 0 0 0 0 ENSG00000226381.1 ENST00000445306.1 chr10:81524486-81546199 2 2219 19492 intergenic 0.97 0 0,0,0 0 0,0,0 8.72420009013069 8.95090293453725 0 4.97791798107256 5.6217422532321 0 5.37539432176656 7.68561461112251 7.928 0 0 chimp,horse,human,macaque,orangutan, lincRNA processed_transcript A549@2.30917,AG04450@1.35709,BJ@2.30755,GM12878@4.7583,H1HESC@3.81891,HELAS3@1.75839,HEPG2@2.56923,HMEC@0.668286,HSMM@1.43599,HUVEC@4.34835,K562@5.99539,MCF7@1.4144,NHEK@2.25462,NHLF@0.516011,SKNSHRA@1.87391, 68 2 0 0 ENSG00000225484.2 ENST00000430963.1 chr10:81563813-81565878 2 553 1510 intergenic -15.60 1 0,0,1 0 0,0,0 0 0 0 0 0 0 0 0 0 0 0 chimp,horse,human,macaque,marmoset,orangutan, lincRNA processed_transcript A549@4.54772,AG04450@1.56735,BJ@3.26434,GM12878@3.88736,H1HESC@3.04179,HELAS3@3.28941,HEPG2@2.79204,HMEC@2.9454,HSMM@2.24519,HUVEC@3.64798,K562@5.59673,MCF7@2.27321,NHEK@2.68571,NHLF@1.3833,SKNSHRA@1.83948, 0 0 0 0 ENSG00000225484.2 ENST00000419697.1 chr10:81563813-81574410 2 511 10084 intergenic -15.60 1 0,1,1 0 0,0,0 0 0 0 0 1.30345101150337 0 0 1.39280047600159 0 0 0 cat,chimp,dog,horse,human,macaque,marmoset,orangutan, lincRNA processed_transcript A549@4.54772,AG04450@1.56735,BJ@3.26434,GM12878@3.88736,H1HESC@3.04179,HELAS3@3.28941,HEPG2@2.79204,HMEC@2.9454,HSMM@2.24519,HUVEC@3.64798,K562@5.59673,MCF7@2.27321,NHEK@2.68571,NHLF@1.3833,SKNSHRA@1.83948, 0 0 0 0 ENSG00000225484.2 ENST00000484794.1 chr10:81564241-81574400 4 229 9924 intergenic 0 0 0,1,1 0 0,0,0 0 0 0 0 1.32446594115276 0 0 1.41525594518339 0 0 0 chimp,human,macaque,marmoset,orangutan, lincRNA processed_transcript A549@4.54772,AG04450@1.56735,BJ@3.26434,GM12878@3.88736,H1HESC@3.04179,HELAS3@3.28941,HEPG2@2.79204,HMEC@2.9454,HSMM@2.24519,HUVEC@3.64798,K562@5.59673,MCF7@2.27321,NHEK@2.68571,NHLF@1.3833,SKNSHRA@1.83948, 0 0 0 0 ENSG00000225484.2 ENST00000477192.1 chr10:81564241-81585538 5 795 20494 intergenic -1.61 0 0,1,1 0 0,0,0 0 0 0 0 1.33112130379623 366.548 0 1.76036888845516 405.874 0 0 chimp,dog,guinea_pig,human,macaque,marmoset,mouse, lincRNA processed_transcript A549@4.54772,AG04450@1.56735,BJ@3.26434,GM12878@3.88736,H1HESC@3.04179,HELAS3@3.28941,HEPG2@2.79204,HMEC@2.9454,HSMM@2.24519,HUVEC@3.64798,K562@5.59673,MCF7@2.27321,NHEK@2.68571,NHLF@1.3833,SKNSHRA@1.83948, 0 0 0 0 ENSG00000225484.2 ENST00000496359.1 chr10:81564241-81586109 4 383 21479 intergenic 10.83 0 0,1,1 1 0,0,0 0 0 0 199.921671018277 9.71078728059966 107.692 221.370757180157 11.0259323059733 119.246 0 0 chimp,cow,horse,human,rat, lincRNA processed_transcript A549@4.54772,AG04450@1.56735,BJ@3.26434,GM12878@3.88736,H1HESC@3.04179,HELAS3@3.28941,HEPG2@2.79204,HMEC@2.9454,HSMM@2.24519,HUVEC@3.64798,K562@5.59673,MCF7@2.27321,NHEK@2.68571,NHLF@1.3833,SKNSHRA@1.83948, 0 0 0 0 ENSG00000225484.2 ENST00000488805.1 chr10:81564241-81586160 4 424 21489 intergenic 10.83 0 0,1,1 1 0,0,0 0 0 0 240.009433962264 9.70626832332821 82.498 265.759433962264 11.0208013402206 91.349 0 0 chimp,human,rat, lincRNA processed_transcript A549@4.54772,AG04450@1.56735,BJ@3.26434,GM12878@3.88736,H1HESC@3.04179,HELAS3@3.28941,HEPG2@2.79204,HMEC@2.9454,HSMM@2.24519,HUVEC@3.64798,K562@5.59673,MCF7@2.27321,NHEK@2.68571,NHLF@1.3833,SKNSHRA@1.83948, 0 0 0 0 ENSG00000225484.2 ENST00000483080.1 chr10:81564241-81586240 5 587 21404 intergenic 10.83 0 0,1,1 1 0,0,0 0 0 0 240.688245315162 9.74481405344795 42.978 266.511073253833 11.0645673705849 47.589 0 0 human,macaque,marmoset,orangutan,rabbit, lincRNA processed_transcript A549@4.54772,AG04450@1.56735,BJ@3.26434,GM12878@3.88736,H1HESC@3.04179,HELAS3@3.28941,HEPG2@2.79204,HMEC@2.9454,HSMM@2.24519,HUVEC@3.64798,K562@5.59673,MCF7@2.27321,NHEK@2.68571,NHLF@1.3833,SKNSHRA@1.83948, 0 0 0 0 ENSG00000225484.2 ENST00000470445.1 chr10:81564241-81586272 5 619 21404 intergenic 10.83 0 0,1,1 1 0,0,0 0 0 0 253.78352180937 9.74481405344795 27.17 281.011308562197 11.0645673705849 30.085 0 0 human,macaque,marmoset,orangutan,rabbit, lincRNA processed_transcript A549@4.54772,AG04450@1.56735,BJ@3.26434,GM12878@3.88736,H1HESC@3.04179,HELAS3@3.28941,HEPG2@2.79204,HMEC@2.9454,HSMM@2.24519,HUVEC@3.64798,K562@5.59673,MCF7@2.27321,NHEK@2.68571,NHLF@1.3833,SKNSHRA@1.83948, 0 0 0 0 ENSG00000225484.2 ENST00000495430.1 chr10:81564241-81586350 5 824 21277 intergenic 10.83 0 0,1,1 1 0,0,0 0 0 0 224.218446601942 9.80297974338488 0 248.27427184466 11.1306105184002 0 0 0 human,marmoset,orangutan, lincRNA processed_transcript A549@4.54772,AG04450@1.56735,BJ@3.26434,GM12878@3.88736,H1HESC@3.04179,HELAS3@3.28941,HEPG2@2.79204,HMEC@2.9454,HSMM@2.24519,HUVEC@3.64798,K562@5.59673,MCF7@2.27321,NHEK@2.68571,NHLF@1.3833,SKNSHRA@1.83948, 44 3 26 3 ENSG00000224428.2 ENST00000518000.1 chr10:81586637-81600751 5 2246 11860 intergenic 6.64 1 0,1,0 0 0,0,0 0 0 0 0 0 341.848 0 4.35741989881956 378.524 1 1 chimp,human,macaque,marmoset,orangutan, processed_transcript processed_transcript A549@3.5576,AG04450@1.53612,BJ@3.6044,GM12878@2.01604,H1HESC@2.93389,HELAS3@2.62071,HEPG2@3.76845,HMEC@6.90463,HSMM@2.47544,HUVEC@3.49493,K562@7.18978,MCF7@4.75449,NHEK@5.57889,NHLF@3.16743,SKNSHRA@6.57218, 0 0 0 0 ENSG00000230091.1 ENST00000448729.1 chr10:81806616-81838600 4 2742 29236 exonic 4.48 1 0,0,1 0 0,0,0 0 0 10.78 6.009117432531 0.292550280476125 11.761 6.14478482859227 0.441613079764674 11.973 0 0 chimp,human,orangutan, lincRNA processed_transcript A549@0.395317,AG04450@0.071484,BJ@0.120552,GM12878@0.0541535,H1HESC@0.963769,HELAS3@0.0851495,HEPG2@0.033023,HMEC@0.036236,HSMM@0.102209,HUVEC@0.0232725,K562@0.003676,MCF7@0.98437,NHEK@0.132896,NHLF@0.135948,SKNSHRA@0.138941, 0 0 0 0 ENSG00000230091.1 ENST00000412298.1 chr10:81806616-81838651 6 3115 28910 exonic 4.48 1 1,1,1 0 0,0,0 0 0 10.78 6.2430176565008 0.29584918713248 8.791 6.36950240770465 0.446592874437911 8.981 0 0 chimp,human,orangutan, lincRNA processed_transcript A549@0.395317,AG04450@0.071484,BJ@0.120552,GM12878@0.0541535,H1HESC@0.963769,HELAS3@0.0851495,HEPG2@0.033023,HMEC@0.036236,HSMM@0.102209,HUVEC@0.0232725,K562@0.003676,MCF7@0.98437,NHEK@0.132896,NHLF@0.135948,SKNSHRA@0.138941, 0 0 0 0 ENSG00000230091.1 ENST00000432070.1 chr10:81806616-81838668 5 3046 28998 exonic 4.48 1 1,1,1 0 0,0,0 0 0 10.78 6.38443860801051 0.294951375956963 8.791 6.51378857518056 0.445237602593282 8.981 0 0 chimp,human,orangutan, lincRNA processed_transcript A549@0.395317,AG04450@0.071484,BJ@0.120552,GM12878@0.0541535,H1HESC@0.963769,HELAS3@0.0851495,HEPG2@0.033023,HMEC@0.036236,HSMM@0.102209,HUVEC@0.0232725,K562@0.003676,MCF7@0.98437,NHEK@0.132896,NHLF@0.135948,SKNSHRA@0.138941, 0 0 0 0 ENSG00000237523.1 ENST00000422847.1 chr10:81967466-81979413 2 2159 9786 intergenic 6.00 1 1,1,1 1 0,0,0 0 0 0 1.49328392774433 2.08093194359289 0 1.59564613246874 22.6781115879828 0 0 0 chimp,human,macaque,orangutan, lincRNA processed_transcript A549@6.39699,AG04450@2.04413,BJ@2.90674,GM12878@0.013045,H1HESC@0.212568,HELAS3@4.98194,HEPG2@0.975165,HMEC@0.584639,HSMM@1.09417,HUVEC@0.270796,K562@0.090936,MCF7@0.326383,NHEK@0.202452,NHLF@5.35689,SKNSHRA@0.112304, 0 0 0 0 ENSG00000237523.1 ENST00000432308.1 chr10:81967965-81978370 2 627 9776 intergenic 6.00 1 0,0,1 0 0,0,0 0 0 0 5.14194577352472 2.08306055646481 0 5.49441786283892 22.7013093289689 0 0 0 NA lincRNA processed_transcript A549@6.39699,AG04450@2.04413,BJ@2.90674,GM12878@0.013045,H1HESC@0.212568,HELAS3@4.98194,HEPG2@0.975165,HMEC@0.584639,HSMM@1.09417,HUVEC@0.270796,K562@0.090936,MCF7@0.326383,NHEK@0.202452,NHLF@5.35689,SKNSHRA@0.112304, 0 0 0 0 ENSG00000235858.1 ENST00000416657.1 chr10:82093527-82094182 2 337 316 intergenic -0.53 1 0,0,0 0 0,0,0 0 0 0 0 0 0 0 0 0 0 0 cat,chimp,horse,human,macaque,marmoset,orangutan,panda,rabbit, antisense antisense A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000226659.1 ENST00000417559.1 chr10:82289353-82295698 2 596 5747 intergenic 7.46 1 1,1,1 1 0,0,0 0 0 0 0 0 6.762 0 0 6.9 0 0 cat,chimp,human,macaque,marmoset,orangutan, antisense antisense A549@0.935847,AG04450@0,BJ@0,GM12878@1.45338,H1HESC@0.0148055,HELAS3@0,HEPG2@0,HMEC@0.082166,HSMM@0.0304955,HUVEC@0.0356595,K562@0.050557,MCF7@0.477345,NHEK@0.0174377,NHLF@0.275811,SKNSHRA@0, 0 0 0 0 ENSG00000231082.1 ENST00000436500.1 chr10:82409553-82413488 3 367 3564 intergenic -1.14 1 0,0,0 0 0,0,0 0 29.2098765432099 0 0 14.7182940516274 0 0 15.0019640852974 0 0 0 chimp,human,macaque,marmoset,orangutan,pig, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0.0324725,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0.005434,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000229458.2 ENST00000440589.2 chr10:83983969-83988935 3 524 4438 intronic 0.89 0 0,0,0 0 0,0,0 0 0 0 0 8.78346101847679 0 0 7.50270392068499 0 0 0 chimp,cow,human,macaque,orangutan, antisense antisense A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0.0521275, 0 0 0 0 ENSG00000225738.2 ENST00000502725.1 chr10:83988741-83992333 3 277 3311 intronic 0 0 0,1,0 0 0,1,0 0 0 0 0 2.82331621866506 0 0 2.92932648746602 0 1 1 chimp,human,macaque,marmoset,orangutan, antisense antisense A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0.018013, 0 0 0 0 ENSG00000225738.2 ENST00000448936.2 chr10:83989886-83992675 3 552 2233 intronic -0.22 0 0,0,0 0 0,1,0 0 0 0 0 4.18629646215853 0 0 4.34348410210479 0 1 1 chimp,human,macaque,marmoset,orangutan, antisense antisense A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0.018013, 0 0 0 0 ENSG00000225738.2 ENST00000505481.1 chr10:83992006-83992676 2 548 120 intronic -0.22 0 0,0,1 0 0,1,0 0 0 0 0 0 0 0 0 0 0 0 chimp,guinea_pig,human,macaque,marmoset,orangutan, antisense retained_intron A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0.018013, 0 0 0 0 ENSG00000233945.1 ENST00000441776.1 chr10:85432162-85435195 3 348 2681 intergenic -0.85 0 0,0,0 0 0,0,0 0 3.04028347631481 0 0 6.2331219694144 0 7.42816091954023 9.85229392017904 0 0 0 chimp,elephant,horse,human,macaque,marmoset,orangutan,pig, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000233258.1 ENST00000432108.1 chr10:85671410-85672678 2 307 959 intergenic 1.35 1 0,0,0 0 0,0,0 0 0 0 0 0 0 0 0 0 0 0 cat,chimp,human,macaque,marmoset,orangutan, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000248253.2 ENST00000514797.2 chr10:85926988-85931832 2 1851 2991 intergenic 6.91 0 1,1,1 0 0,0,0 0 0 0 0 0 0 0 0 0 0 0 NA lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@38.7248,H1HESC@0,HELAS3@0.092357,HEPG2@0.419357,HMEC@0.004419,HSMM@0.0134445,HUVEC@0,K562@0.006483,MCF7@0,NHEK@1.34291,NHLF@0.0576065,SKNSHRA@0, 0 0 0 0 ENSG00000229404.1 ENST00000415469.1 chr10:86039736-86054415 6 2679 11990 intergenic 5.34 0 0,0,1 0 0,0,0 3.34826427771557 0.880733944954128 0 5.61926091825308 5.58765638031693 0 6.13064576334453 5.8000834028357 0 0 0 chimp,horse,human,macaque,marmoset,orangutan, lincRNA processed_transcript A549@0.66063,AG04450@0,BJ@0.006134,GM12878@0.004339,H1HESC@0.353507,HELAS3@0.02021,HEPG2@0.0639635,HMEC@0,HSMM@0,HUVEC@0,K562@0.276769,MCF7@0.814894,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000229404.1 ENST00000437892.1 chr10:86039747-86048751 3 671 8329 intergenic -1.37 0 0,0,0 0 0,0,0 0 0 0 0 0 0 0 0 0 0 0 chimp,human,macaque,marmoset,orangutan, lincRNA processed_transcript A549@0.66063,AG04450@0,BJ@0.006134,GM12878@0.004339,H1HESC@0.353507,HELAS3@0.02021,HEPG2@0.0639635,HMEC@0,HSMM@0,HUVEC@0,K562@0.276769,MCF7@0.814894,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000237267.1 ENST00000454178.1 chr10:86953177-86957714 3 2026 2507 intergenic 3.61 0 0,0,0 0 0,0,0 0 31.635021938572 148.966 8.66485686080948 37.5715995213402 226.949 12.3657453109576 37.0913442361388 238.815 0 0 chimp,human,macaque,marmoset,orangutan, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000223993.1 ENST00000444137.1 chr10:87191699-87192271 2 401 169 intergenic 0 0 0,0,0 0 0,0,0 0 0 0 0 0 0 0 0 0 0 0 chimp,dog,horse,human,macaque,marmoset,orangutan,pig,rabbit,rat, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000224504.1 ENST00000435367.1 chr10:87192619-87204685 2 498 11566 intergenic -0.59 0 0,0,0 0 0,0,0 0 8.79621303821546 0 0 9.74329932560955 0 0 11.5303475704652 0 0 0 cat,chimp,horse,human,macaque,marmoset,orangutan, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000230962.1 ENST00000441457.1 chr10:87209349-87251753 6 1481 40913 intergenic 4.72 0 0,0,0 0 0,0,0 0 2.91648131400777 29.988 1.89196488858879 4.31664752034806 53.499 2.08102633355841 4.72302202234009 59.419 0 0 chimp,elephant,human,macaque,marmoset,orangutan,rabbit, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000234942.1 ENST00000443311.1 chr10:87365150-87366263 2 428 683 intronic 2.72 0 0,0,0 0 0,0,0 0 0 0 0 0 0 0 0 0 0 0 cat,cow,human,macaque,marmoset,orangutan,pig, antisense antisense A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000227896.1 ENST00000428940.1 chr10:88281702-88282443 2 641 98 intergenic 3.37 1 1,1,1 1 0,0,0 2.23712948517941 0 274.455 53.9001560062402 0 365.405 51.7176287051482 0 327.053 0 0 cat,chimp,cow,elephant,human,macaque,marmoset,orangutan,pig, antisense antisense A549@0.355428,AG04450@0.142644,BJ@0.216442,GM12878@0.236428,H1HESC@2.13094,HELAS3@0.520991,HEPG2@0.580928,HMEC@0.28656,HSMM@0.299439,HUVEC@0.588185,K562@0.349281,MCF7@0.475761,NHEK@0.157899,NHLF@0.238736,SKNSHRA@0.540628, 0 0 0 0 ENSG00000233165.1 ENST00000440490.1 chr10:88725496-88728935 2 500 2937 intronic 1.28 0 1,1,1 0 0,0,0 0 0 0 0 2.67109295199183 0 0 6.78345250255363 0 0 0 human,macaque,orangutan, processed_transcript processed_transcript A549@0.535467,AG04450@0.230006,BJ@0.584184,GM12878@0.628215,H1HESC@0.166957,HELAS3@1.64314,HEPG2@0.14187,HMEC@0.995192,HSMM@0.385532,HUVEC@0.207894,K562@0,MCF7@0.961689,NHEK@3.09748,NHLF@0.268614,SKNSHRA@0.02016, 0 0 0 0 ENSG00000233165.1 ENST00000418273.1 chr10:88725496-88729158 3 715 2943 intronic 1.28 0 1,1,1 0 0,0,0 0 0 0 0 2.66564729867482 16.91 0 6.76962283384302 20.644 0 0 human,macaque,orangutan, processed_transcript processed_transcript A549@0.535467,AG04450@0.230006,BJ@0.584184,GM12878@0.628215,H1HESC@0.166957,HELAS3@1.64314,HEPG2@0.14187,HMEC@0.995192,HSMM@0.385532,HUVEC@0.207894,K562@0,MCF7@0.961689,NHEK@3.09748,NHLF@0.268614,SKNSHRA@0.02016, 0 0 0 0 ENSG00000151303.9 ENST00000444431.1 chr10:88752163-88769960 7 4553 13232 intergenic 97.07 0 0,0,1 0 0,0,1 0 0 0 13.9828684383923 0 0 351.945310784098 49.5401299879081 125.716 0 0 human, processed_transcript processed_transcript A549@0.149578,AG04450@0.143504,BJ@1.60713,GM12878@0.053043,H1HESC@0.327765,HELAS3@0.159757,HEPG2@0.123203,HMEC@5.79071,HSMM@0.771261,HUVEC@0.142383,K562@0.460222,MCF7@1.29595,NHEK@1.3411,NHLF@2.53568,SKNSHRA@0.105401, 0 0 0 0 ENSG00000229969.1 ENST00000451760.1 chr10:88769542-88775539 2 232 5763 intergenic 0.37 0 0,1,0 0 0,0,0 0 0 0 0 0 0 433.594827586207 18.2425819885476 0 0 0 chimp,horse,human,macaque,marmoset,orangutan,panda, antisense antisense A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0.178241, 54 3 33 3 ENSG00000237280.1 ENST00000454709.1 chr10:88873711-88875280 2 686 881 intronic -6.53 0 0,0,0 0 0,0,0 0 0 0 8.67638483965015 0 0 27.5568513119534 0 0 0 0 chimp,human,macaque,marmoset,orangutan, sense_intronic sense_intronic A549@0.0213565,AG04450@0.082764,BJ@0.0307075,GM12878@0.088257,H1HESC@0.030649,HELAS3@0.138216,HEPG2@0.302716,HMEC@0,HSMM@0.007943,HUVEC@0.0154495,K562@0.127407,MCF7@0.217707,NHEK@0.0487283,NHLF@0.003954,SKNSHRA@0.0147865, 0 0 0 0 ENSG00000223482.1 ENST00000451940.1 chr10:88963610-89102299 6 678 138001 encompassing 10.18 0 0,1,0 1 0,0,0 0 0.653357584365331 0 0 4.2589908768777 0 0 19.9398047840233 0 0 0 chimp,cow,dog,guinea_pig,human,macaque,marmoset,mouse,opossum,orangutan,rat, antisense antisense A549@17.1127,AG04450@4.29162,BJ@15.098,GM12878@21.6401,H1HESC@14.4106,HELAS3@12.753,HEPG2@14.5849,HMEC@11.8378,HSMM@8.63837,HUVEC@19.19,K562@29.5268,MCF7@10.1553,NHEK@15.9664,NHLF@8.66358,SKNSHRA@14.7633, 0 0 0 0 ENSG00000223482.1 ENST00000456104.1 chr10:88995384-89086431 4 482 90559 intergenic -5.99 0 0,0,0 0 0,0,0 0 0.99563820271867 0 0 4.57051204187325 0 0 8.1564284057907 0 0 0 chimp,human,macaque,marmoset,orangutan, antisense antisense A549@17.1127,AG04450@4.29162,BJ@15.098,GM12878@21.6401,H1HESC@14.4106,HELAS3@12.753,HEPG2@14.5849,HMEC@11.8378,HSMM@8.63837,HUVEC@19.19,K562@29.5268,MCF7@10.1553,NHEK@15.9664,NHLF@8.66358,SKNSHRA@14.7633, 0 0 0 0 ENSG00000223482.1 ENST00000433530.1 chr10:88998424-89096565 5 396 97737 intergenic 1.14 1 0,0,1 0 0,0,0 0 0.922516549515537 0 0 4.47487645415759 0 12.8863636363636 8.09367997789987 0 0 0 chimp,dog,horse,human,macaque,marmoset,orangutan, antisense antisense A549@17.1127,AG04450@4.29162,BJ@15.098,GM12878@21.6401,H1HESC@14.4106,HELAS3@12.753,HEPG2@14.5849,HMEC@11.8378,HSMM@8.63837,HUVEC@19.19,K562@29.5268,MCF7@10.1553,NHEK@15.9664,NHLF@8.66358,SKNSHRA@14.7633, 0 0 0 0 ENSG00000223482.1 ENST00000447424.1 chr10:88998424-89096631 6 565 97632 intergenic 1.14 1 0,0,1 0 0,0,0 0 0.923508685676827 0 0 4.47968903638151 0 9.03185840707965 8.10238446411013 0 0 0 chimp,human,macaque,marmoset,orangutan, antisense antisense A549@17.1127,AG04450@4.29162,BJ@15.098,GM12878@21.6401,H1HESC@14.4106,HELAS3@12.753,HEPG2@14.5849,HMEC@11.8378,HSMM@8.63837,HUVEC@19.19,K562@29.5268,MCF7@10.1553,NHEK@15.9664,NHLF@8.66358,SKNSHRA@14.7633, 0 0 0 0 ENSG00000223482.1 ENST00000433920.1 chr10:88998424-89102369 6 870 103065 intergenic 10.18 1 0,1,1 1 0,0,0 0 0.874826565759472 0 0 4.35869596856353 0 5.86551724137931 9.7255227283753 0 0 0 chimp,cow,dog,human,macaque,marmoset,mouse,orangutan,rat, antisense antisense A549@17.1127,AG04450@4.29162,BJ@15.098,GM12878@21.6401,H1HESC@14.4106,HELAS3@12.753,HEPG2@14.5849,HMEC@11.8378,HSMM@8.63837,HUVEC@19.19,K562@29.5268,MCF7@10.1553,NHEK@15.9664,NHLF@8.66358,SKNSHRA@14.7633, 44 3 0 0 ENSG00000223482.1 ENST00000444062.1 chr10:88998501-89066627 4 307 67813 intergenic 1.14 1 0,0,0 0 0,0,0 0 1.3295975697875 0 0 3.62355300606079 0 0 6.23995399112265 0 0 0 chimp,human,macaque,marmoset,orangutan, antisense antisense A549@17.1127,AG04450@4.29162,BJ@15.098,GM12878@21.6401,H1HESC@14.4106,HELAS3@12.753,HEPG2@14.5849,HMEC@11.8378,HSMM@8.63837,HUVEC@19.19,K562@29.5268,MCF7@10.1553,NHEK@15.9664,NHLF@8.66358,SKNSHRA@14.7633, 0 0 0 0 ENSG00000223482.1 ENST00000446751.1 chr10:89003889-89102369 6 2388 96082 intergenic 10.18 0 0,1,1 1 0,0,0 0 0.938406777544181 0 0 4.59287899918819 0 0 10.3460897982973 0 0 0 chimp,human,macaque,marmoset,orangutan, antisense antisense A549@17.1127,AG04450@4.29162,BJ@15.098,GM12878@21.6401,H1HESC@14.4106,HELAS3@12.753,HEPG2@14.5849,HMEC@11.8378,HSMM@8.63837,HUVEC@19.19,K562@29.5268,MCF7@10.1553,NHEK@15.9664,NHLF@8.66358,SKNSHRA@14.7633, 0 0 0 0 ENSG00000223482.1 ENST00000420424.1 chr10:89046655-89068341 2 2224 19460 intergenic 0.97 1 0,0,0 0 0,0,0 0 4.63329907502569 0 0 4.05765673175745 3.57 0 6.84660842754368 6.53 0 0 chimp,horse,human,macaque,orangutan, antisense antisense A549@17.1127,AG04450@4.29162,BJ@15.098,GM12878@21.6401,H1HESC@14.4106,HELAS3@12.753,HEPG2@14.5849,HMEC@11.8378,HSMM@8.63837,HUVEC@19.19,K562@29.5268,MCF7@10.1553,NHEK@15.9664,NHLF@8.66358,SKNSHRA@14.7633, 68 2 0 0 ENSG00000223482.1 ENST00000413722.1 chr10:89047714-89102044 4 728 53596 intergenic 0.97 1 1,1,1 1 0,0,0 0 1.68228972311367 0 0 5.27030002238973 0 0 13.2928949921636 0 0 0 cat,chimp,horse,human,macaque,marmoset,orangutan, antisense antisense A549@17.1127,AG04450@4.29162,BJ@15.098,GM12878@21.6401,H1HESC@14.4106,HELAS3@12.753,HEPG2@14.5849,HMEC@11.8378,HSMM@8.63837,HUVEC@19.19,K562@29.5268,MCF7@10.1553,NHEK@15.9664,NHLF@8.66358,SKNSHRA@14.7633, 0 0 0 0 ENSG00000223482.1 ENST00000417860.1 chr10:89079613-89090709 3 445 10647 intergenic -11.78 0 0,0,0 0 0,0,0 0 0 0 0 3.42133934441627 10.994 0 10.5787545787546 12.512 0 0 chimp,human,macaque,marmoset,orangutan, antisense antisense A549@17.1127,AG04450@4.29162,BJ@15.098,GM12878@21.6401,H1HESC@14.4106,HELAS3@12.753,HEPG2@14.5849,HMEC@11.8378,HSMM@8.63837,HUVEC@19.19,K562@29.5268,MCF7@10.1553,NHEK@15.9664,NHLF@8.66358,SKNSHRA@14.7633, 0 0 0 0 ENSG00000223482.1 ENST00000413961.1 chr10:89080310-89102087 5 496 21273 intergenic 10.18 0 0,1,0 1 0,0,0 0 0 0 0 3.05518732665821 0 0 17.0950970714051 0 0 0 chimp,cow,dog,guinea_pig,human,macaque,marmoset,orangutan, antisense antisense A549@17.1127,AG04450@4.29162,BJ@15.098,GM12878@21.6401,H1HESC@14.4106,HELAS3@12.753,HEPG2@14.5849,HMEC@11.8378,HSMM@8.63837,HUVEC@19.19,K562@29.5268,MCF7@10.1553,NHEK@15.9664,NHLF@8.66358,SKNSHRA@14.7633, 0 0 0 0 ENSG00000223482.1 ENST00000458739.1 chr10:89084801-89102242 6 727 16704 intergenic 10.18 0 0,1,0 1 0,0,0 0 0 0 0 2.43684147509579 0 0 16.429058908046 0 0 0 chimp,cow,horse,human, antisense antisense A549@17.1127,AG04450@4.29162,BJ@15.098,GM12878@21.6401,H1HESC@14.4106,HELAS3@12.753,HEPG2@14.5849,HMEC@11.8378,HSMM@8.63837,HUVEC@19.19,K562@29.5268,MCF7@10.1553,NHEK@15.9664,NHLF@8.66358,SKNSHRA@14.7633, 0 0 26 3 ENSG00000223482.1 ENST00000366446.4 chr10:89093797-89096586 2 817 1970 intergenic -5.34 0 0,0,0 0 0,0,0 0 0 0 0 0 0 0 3.7005076142132 0 0 0 chimp,human,macaque,orangutan, antisense antisense A549@17.1127,AG04450@4.29162,BJ@15.098,GM12878@21.6401,H1HESC@14.4106,HELAS3@12.753,HEPG2@14.5849,HMEC@11.8378,HSMM@8.63837,HUVEC@19.19,K562@29.5268,MCF7@10.1553,NHEK@15.9664,NHLF@8.66358,SKNSHRA@14.7633, 0 0 0 0 ENSG00000224914.1 ENST00000439559.1 chr10:89102681-89115187 4 887 11613 intergenic 6.64 0 0,1,0 0 0,0,0 0 0 0 0 3.25962283647636 0 0 10.0493412554895 0 0 0 chimp,human,macaque,marmoset,orangutan, lincRNA lincRNA A549@2.01093,AG04450@1.42923,BJ@1.9851,GM12878@1.01575,H1HESC@1.57507,HELAS3@2.45011,HEPG2@4.03886,HMEC@2.81848,HSMM@1.76164,HUVEC@3.6316,K562@2.67794,MCF7@1.29355,NHEK@5.31691,NHLF@0.981107,SKNSHRA@4.93322, 0 0 0 0 ENSG00000228055.1 ENST00000429129.1 chr10:89156819-89167457 3 704 9930 intergenic 5.96 1 0,0,0 0 0,0,0 0 0 0 0 0 49.95 0 0 53.465 0 0 chimp,human,marmoset,orangutan, lincRNA processed_transcript A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0.0715195,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 24 4 15 4 ENSG00000228055.1 ENST00000447936.1 chr10:89156819-89184549 3 508 27218 intergenic 7.04 1 0,0,0 0 0,0,0 0 0 0 0 7.63079579689911 0 39.740157480315 159.473693879051 696.486 0 0 chimp,human,macaque,marmoset,orangutan, lincRNA processed_transcript A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0.0715195,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000223761.1 ENST00000446794.1 chr10:89351364-89365781 2 166 14249 intergenic 0 0 0,1,0 0 0,0,0 0 4.26640465997614 0 0 9.87121903291459 0 0 12.2843006526774 0 0 0 cat,chimp,dog,guinea_pig,horse,human,macaque,marmoset,orangutan,rabbit, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000225913.1 ENST00000438082.1 chr10:89367742-89419036 4 491 50797 intergenic 3.47 1 0,0,0 0 0,0,0 37.4460285132383 2.94688662716302 0 0 1.85430241943422 0 0 7.96694686694096 0 0 0 chimp,cow,horse,human,macaque,marmoset,orangutan,panda,pig, processed_transcript processed_transcript A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0.006602,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0.022209,K562@0,MCF7@0.0180935,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000225913.1 ENST00000439051.1 chr10:89367769-89419036 3 399 50864 intergenic 3.47 1 0,1,0 0 0,0,0 46.0802005012531 2.94300487574709 0 0 1.8518598615917 0 0 7.95645250078641 0 0 0 chimp,cow,horse,human,macaque,marmoset,orangutan,panda,pig, processed_transcript processed_transcript A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0.006602,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0.022209,K562@0,MCF7@0.0180935,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000196566.2 ENST00000354527.2 chr10:89369920-89419760 4 740 49094 exonic 24.35 0 0,1,0 0 0,0,0 10.4351351351351 1.47596447631075 0 17.8216216216216 3.60616368599014 4.411 17.9675675675676 9.4432720902758 4.609 0 0 chimp,human,macaque,marmoset,orangutan, antisense antisense A549@0,AG04450@0,BJ@0.0043495,GM12878@0.0294445,H1HESC@0.022875,HELAS3@0.0152895,HEPG2@0.0272945,HMEC@0.005504,HSMM@0,HUVEC@0.012663,K562@0,MCF7@0,NHEK@0.00171567,NHLF@0.005187,SKNSHRA@0.012774, 0 0 0 0 ENSG00000224745.1 ENST00000416679.1 chr10:89638449-89640184 3 496 1235 intronic -11.41 0 0,0,0 0 0,0,0 0 39.9060728744939 13.144 2 60.2882591093117 5.258 10.5463709677419 64.2388663967611 9.728 0 0 cat,chimp,cow,dog,elephant,guinea_pig,horse,human,macaque,marmoset,orangutan,panda,pig,rabbit,rat, sense_intronic sense_intronic A549@0.117287,AG04450@0.089441,BJ@0.131528,GM12878@0.716126,H1HESC@0.264783,HELAS3@0.675009,HEPG2@0.287733,HMEC@0.048758,HSMM@0,HUVEC@0.0682575,K562@0.17799,MCF7@0,NHEK@0.0359037,NHLF@0.02036,SKNSHRA@0.074186, 0 0 0 0 ENSG00000180139.7 ENST00000437930.1 chr10:90692441-90699731 5 2035 5247 exonic 4.03 0 0,0,0 0 0,0,0 93.8142506142506 16.9300552696779 0 110.299262899263 14.3215170573661 0 118.888452088452 15.9151896321708 0 0 0 chimp,human,macaque,marmoset,orangutan, antisense antisense A549@0.292813,AG04450@0.466523,BJ@0.425366,GM12878@0.409003,H1HESC@0.0569025,HELAS3@0.152678,HEPG2@0.137037,HMEC@0,HSMM@0.02066,HUVEC@0.0021375,K562@0,MCF7@0,NHEK@0.02074,NHLF@0.222161,SKNSHRA@0.188744, 0 0 0 0 ENSG00000180139.7 ENST00000540599.1 chr10:90692441-90699731 5 2038 5244 exonic 4.03 0 0,0,0 0 0,0,0 93.6761530912659 16.9397406559878 0 110.13689892051 14.3297101449275 0 118.713444553484 15.9242944317315 0 1 1 chimp,human,macaque,marmoset,orangutan, antisense antisense A549@0.292813,AG04450@0.466523,BJ@0.425366,GM12878@0.409003,H1HESC@0.0569025,HELAS3@0.152678,HEPG2@0.137037,HMEC@0,HSMM@0.02066,HUVEC@0.0021375,K562@0,MCF7@0,NHEK@0.02074,NHLF@0.222161,SKNSHRA@0.188744, 0 0 0 0 ENSG00000232110.1 ENST00000444849.1 chr10:91043394-91046706 2 333 2977 intronic -12.10 0 0,1,0 0 0,0,0 0 0 0 0 0 0 0 0 0 0 0 dog,elephant,horse,human,orangutan,pig, antisense antisense A549@0.00558,AG04450@0.129468,BJ@0.922381,GM12878@0,H1HESC@0.0523525,HELAS3@0.722037,HEPG2@0.0856745,HMEC@0.04136,HSMM@0.132079,HUVEC@0.006012,K562@0,MCF7@0,NHEK@0.097844,NHLF@0.0658335,SKNSHRA@2.33791, 0 0 0 0 ENSG00000232110.1 ENST00000354541.3 chr10:91043522-91051882 3 492 7864 intronic 1.18 1 1,1,1 0 0,0,0 0 0 0 0 0 0 0 0 0 0 0 human, antisense antisense A549@0.00558,AG04450@0.129468,BJ@0.922381,GM12878@0,H1HESC@0.0523525,HELAS3@0.722037,HEPG2@0.0856745,HMEC@0.04136,HSMM@0.132079,HUVEC@0.006012,K562@0,MCF7@0,NHEK@0.097844,NHLF@0.0658335,SKNSHRA@2.33791, 0 0 0 0 ENSG00000232110.1 ENST00000448897.1 chr10:91043556-91051882 2 230 8094 intronic 1.18 1 1,1,1 0 0,0,0 0 0 0 0 0 0 0 0 0 0 0 human, antisense antisense A549@0.00558,AG04450@0.129468,BJ@0.922381,GM12878@0,H1HESC@0.0523525,HELAS3@0.722037,HEPG2@0.0856745,HMEC@0.04136,HSMM@0.132079,HUVEC@0.006012,K562@0,MCF7@0,NHEK@0.097844,NHLF@0.0658335,SKNSHRA@2.33791, 0 0 0 0 ENSG00000232110.1 ENST00000437032.1 chr10:91043563-91044311 2 601 145 intronic -5.33 0 0,1,0 0 0,0,0 0 0 0 0 0 0 0 0 0 0 0 chimp,dog,human,orangutan,panda,pig, antisense antisense A549@0.00558,AG04450@0.129468,BJ@0.922381,GM12878@0,H1HESC@0.0523525,HELAS3@0.722037,HEPG2@0.0856745,HMEC@0.04136,HSMM@0.132079,HUVEC@0.006012,K562@0,MCF7@0,NHEK@0.097844,NHLF@0.0658335,SKNSHRA@2.33791, 0 0 0 0 ENSG00000234452.1 ENST00000454270.1 chr10:91215821-91227897 3 475 11597 exonic -1.31 0 0,0,0 0 0,0,0 75.8652631578947 9.9133396568078 33.976 32.76 5.05699749935328 0 47.1094736842105 6.54764163145641 2.187 0 0 cat,chimp,cow,dog,elephant,guinea_pig,horse,human,macaque,marmoset,mouse,opossum,orangutan,pig,rabbit, antisense antisense A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0.062618,HUVEC@0,K562@0,MCF7@0,NHEK@0.002762,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000234452.1 ENST00000423474.1 chr10:91222372-91227897 3 402 5119 exonic -1.51 0 0,0,0 0 0,0,0 0 8.22602070716937 92.268 6.58208955223881 0 68.6 12.589552238806 2.43289705020512 77.687 0 0 cat,chimp,cow,elephant,horse,human,macaque,marmoset,orangutan,panda,pig,rabbit, antisense antisense A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0.062618,HUVEC@0,K562@0,MCF7@0,NHEK@0.002762,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000232936.1 ENST00000454174.1 chr10:91405039-91410424 4 559 4820 exonic 3.57 1 1,1,1 0 0,0,0 63.9713774597496 54.8163900414938 131.439 101.347048300537 24.1163900414938 192.81 101.454382826476 26.9464730290456 190.529 0 0 chimp,cow,dog,horse,human,macaque,marmoset,orangutan, antisense antisense A549@0.106627,AG04450@0.02059,BJ@0.0109705,GM12878@0.048212,H1HESC@0.029691,HELAS3@0.090962,HEPG2@0.014535,HMEC@0.015781,HSMM@0,HUVEC@0,K562@0.021474,MCF7@0.010794,NHEK@0,NHLF@0.010782,SKNSHRA@0.039834, 0 0 0 0 ENSG00000232936.1 ENST00000451733.1 chr10:91405199-91410424 4 441 4778 exonic 3.57 1 0,0,1 0 0,0,0 12.6938775510204 54.0615320217664 167.646 28.6984126984127 22.7505232314776 244.565 32.7437641723356 25.272289660946 242.148 0 0 chimp,cow,horse,human,macaque,marmoset,orangutan, antisense antisense A549@0.106627,AG04450@0.02059,BJ@0.0109705,GM12878@0.048212,H1HESC@0.029691,HELAS3@0.090962,HEPG2@0.014535,HMEC@0.015781,HSMM@0,HUVEC@0,K562@0.021474,MCF7@0.010794,NHEK@0,NHLF@0.010782,SKNSHRA@0.039834, 0 0 0 0 ENSG00000225836.1 ENST00000428166.1 chr10:91406046-91410579 2 366 4165 intergenic 5.78 0 0,0,0 0 0,0,0 0 31.4989195678271 0 10.1639344262295 4.8405762304922 0 10.6147540983607 9.9078031212485 0 0 0 cat,chimp,dog,horse,human,macaque,marmoset,orangutan,rabbit, lincRNA lincRNA A549@0,AG04450@0.0175245,BJ@0,GM12878@0.014432,H1HESC@0.015817,HELAS3@0.0113425,HEPG2@0.0390815,HMEC@0,HSMM@0,HUVEC@0,K562@0.026933,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000235100.2 ENST00000449882.1 chr10:91426944-91461177 4 1609 32618 intergenic 3.49 1 1,1,1 1 0,0,0 0 9.36734318474462 15.163 20.3561218147918 15.8030228708075 31.39 20.5792417650715 19.5565332025262 30.611 0 0 cat,chimp,dog,horse,human,macaque,marmoset,orangutan,panda,pig, antisense antisense A549@0.076988,AG04450@0.0503855,BJ@0.043617,GM12878@0.0524035,H1HESC@0.11067,HELAS3@0.150627,HEPG2@0.350613,HMEC@0.019357,HSMM@0.0078265,HUVEC@0.0108885,K562@0.049607,MCF7@0.109685,NHEK@0.0482483,NHLF@0.013256,SKNSHRA@0.0760825, 0 0 0 0 ENSG00000240996.1 ENST00000455699.1 chr10:91454052-91457685 2 665 2966 intergenic -8.53 0 0,0,0 0 0,0,0 6.56992481203008 33.1112609575185 0 34.3097744360902 5.14733648010789 0 45.4812030075188 5.31051921780175 0 0 0 chimp,cow,dog,elephant,guinea_pig,horse,human,macaque,marmoset,orangutan,panda,rabbit, antisense antisense A549@0.037286,AG04450@0.028704,BJ@0.011359,GM12878@0.140515,H1HESC@0.016332,HELAS3@0.188383,HEPG2@0.080242,HMEC@0.008439,HSMM@0.000581,HUVEC@0.0064195,K562@0.164631,MCF7@0.022193,NHEK@0.0262363,NHLF@0.0175105,SKNSHRA@0.180268, 0 0 0 0 ENSG00000232229.1 ENST00000448963.1 chr10:91589267-91600618 4 4268 7077 intergenic 8.01 1 0,1,1 0 0,0,0 0 0 0 1.10402999062793 0.99265225377985 0 13.0234301780694 1.40511516179172 4.617 0 0 chimp,horse,human,macaque,orangutan, lincRNA processed_transcript A549@0.00071,AG04450@0.262511,BJ@0.183401,GM12878@0.0006025,H1HESC@0.001272,HELAS3@0,HEPG2@0,HMEC@0.152341,HSMM@0.000529,HUVEC@0.0553765,K562@0.0056125,MCF7@0.386827,NHEK@0.010551,NHLF@0.195308,SKNSHRA@0.000583, 0 0 0 0 ENSG00000232229.1 ENST00000448490.1 chr10:91589313-91600618 3 3888 7413 intergenic 8.01 1 0,0,1 0 0,0,0 0 0 0 1.2119341563786 0.947659517064616 0 14.2962962962963 1.34142722244705 3.402 0 0 chimp,horse,human,macaque,orangutan, lincRNA processed_transcript A549@0.00071,AG04450@0.262511,BJ@0.183401,GM12878@0.0006025,H1HESC@0.001272,HELAS3@0,HEPG2@0,HMEC@0.152341,HSMM@0.000529,HUVEC@0.0553765,K562@0.0056125,MCF7@0.386827,NHEK@0.010551,NHLF@0.195308,SKNSHRA@0.000583, 0 0 0 0 ENSG00000226159.1 ENST00000428485.1 chr10:91675246-91717130 4 1856 40022 intergenic -0.08 0 0,0,0 0 0,0,0 0 5.64784368597272 0 33.125 8.93920843536055 1.785 35.7095905172414 10.54604967268 1.813 0 0 chimp,elephant,horse,human,marmoset,rat, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0.008561,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0.001081,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000236373.1 ENST00000418379.1 chr10:92162278-92300562 7 974 137298 intergenic -1.38 1 0,0,0 0 0,0,0 0 4.23831374091392 0 1.08008213552361 5.07417442351673 0 1.1170431211499 7.67678334717184 0 0 0 chimp,dog,horse,human,macaque,marmoset,orangutan,rabbit, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0.005962,H1HESC@0.172054,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0.002096,NHEK@0.0179613,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000224750.1 ENST00000422206.1 chr10:92213927-92261197 3 2365 44901 intergenic 1.51 1 0,0,0 0 0,0,0 31.5488372093023 3.97919868154384 0 31.0016913319239 2.9012048729427 0 27.3353065539112 4.30353444244004 0 0 0 cat,chimp,human,macaque,marmoset,orangutan,pig, lincRNA lincRNA A549@0.0046985,AG04450@0.0025005,BJ@0.0414155,GM12878@0.002571,H1HESC@0,HELAS3@0,HEPG2@0.0034795,HMEC@0.035906,HSMM@0,HUVEC@0,K562@0,MCF7@0.000849,NHEK@0.0112447,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000224750.1 ENST00000453889.1 chr10:92214437-92221258 2 872 5947 intergenic -1.50 0 0,0,1 0 0,0,0 0 0 0 0 0 0 0 0.54868000672608 0 0 0 chimp,dog,elephant,horse,human,macaque,marmoset,orangutan,panda,pig,rabbit,rat, lincRNA lincRNA A549@0.0046985,AG04450@0.0025005,BJ@0.0414155,GM12878@0.002571,H1HESC@0,HELAS3@0,HEPG2@0.0034795,HMEC@0.035906,HSMM@0,HUVEC@0,K562@0,MCF7@0.000849,NHEK@0.0112447,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000224750.1 ENST00000414903.1 chr10:92214455-92262725 4 458 47806 intergenic -4.28 0 0,0,0 0 0,0,0 0 5.29814249257415 0 0 4.25858678826925 0 0 5.42482115215663 0 0 0 chimp,human,macaque,marmoset,orangutan, lincRNA lincRNA A549@0.0046985,AG04450@0.0025005,BJ@0.0414155,GM12878@0.002571,H1HESC@0,HELAS3@0,HEPG2@0.0034795,HMEC@0.035906,HSMM@0,HUVEC@0,K562@0,MCF7@0.000849,NHEK@0.0112447,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000224750.1 ENST00000439157.1 chr10:92214455-92290873 4 780 75632 intergenic 6.89 0 0,0,0 0 0,0,0 0 3.88240427332346 0 0 5.06288343558282 0 0 5.9168473661942 0 0 0 chimp,human,macaque,marmoset,orangutan, lincRNA lincRNA A549@0.0046985,AG04450@0.0025005,BJ@0.0414155,GM12878@0.002571,H1HESC@0,HELAS3@0,HEPG2@0.0034795,HMEC@0.035906,HSMM@0,HUVEC@0,K562@0,MCF7@0.000849,NHEK@0.0112447,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000238291.1 ENST00000425365.1 chr10:92222474-92227709 3 828 4403 intergenic 0.19 0 0,0,0 0 0,0,0 0 31.8192141721553 11.66 0 7.93595275948217 15.195 0 9.0204406086759 15.775 0 0 chimp,human,macaque,marmoset,orangutan, lincRNA lincRNA A549@0,AG04450@0,BJ@0.004926,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000225525.1 ENST00000455465.1 chr10:92720833-92757505 2 361 36309 intergenic 0 0 0,1,0 0 0,0,0 0 11.3674295629183 0 13.7396121883657 11.1911922663802 21.727 14.3490304709141 13.248450797323 20.982 0 0 chimp,human,macaque,marmoset,orangutan, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0.092469,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0.0056685,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000225519.1 ENST00000412362.1 chr10:92754377-92766147 2 378 11390 intergenic -7.94 0 1,1,1 0 0,0,0 100.981481481481 9.66417910447761 8.897 6.42857142857143 11.2949956101844 13.413 7.1957671957672 14.1755048287972 13.872 0 0 NA lincRNA lincRNA A549@0,AG04450@0,BJ@0.025473,GM12878@1.40541,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0.251256,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0.030466,SKNSHRA@0, 0 0 0 0 ENSG00000224851.1 ENST00000423621.1 chr10:92806923-92821916 3 442 14547 intergenic -7.02 0 1,1,1 0 0,0,0 0 40.135904310167 135.995 59.9457013574661 39.0929401251117 167.066 83.6085972850679 100.609335258129 161.309 0 0 cat,chimp,horse,human,macaque,marmoset,orangutan,panda,pig,rabbit, processed_transcript processed_transcript A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000228701.1 ENST00000432938.1 chr10:93542596-93558048 2 375 15075 intergenic -10.60 0 0,1,1 1 0,0,0 127.592 3.38713101160862 60.984 9.35733333333333 1.96789386401327 207.771 83.392 2.72444444444444 228.395 0 0 chimp,elephant,horse,human,macaque,marmoset,orangutan,pig, antisense antisense A549@0.210297,AG04450@0.0837705,BJ@0.017865,GM12878@0.233683,H1HESC@0.223018,HELAS3@0.136116,HEPG2@0.0692635,HMEC@0.148418,HSMM@0.109415,HUVEC@0.0455205,K562@0.0249265,MCF7@0.384483,NHEK@0.00851833,NHLF@0.043869,SKNSHRA@0.0752965, 0 0 0 0 ENSG00000228701.1 ENST00000432246.1 chr10:93542693-93557953 2 607 14651 intergenic -5.62 0 0,1,0 1 0,0,0 78.825370675453 3.48515459695584 60.984 0 2.02484472049689 208.173 36.9621087314662 2.80328987782404 227.407 0 0 chimp,dog,horse,human,marmoset,orangutan,pig, antisense antisense A549@0.210297,AG04450@0.0837705,BJ@0.017865,GM12878@0.233683,H1HESC@0.223018,HELAS3@0.136116,HEPG2@0.0692635,HMEC@0.148418,HSMM@0.109415,HUVEC@0.0455205,K562@0.0249265,MCF7@0.384483,NHEK@0.00851833,NHLF@0.043869,SKNSHRA@0.0752965, 0 0 0 0 ENSG00000256759.1 ENST00000541710.1 chr10:94178255-94180347 2 1923 167 intergenic -0.48 0 0,1,0 0 0,0,0 0 0 0 0 0 0 70.2267290691628 0 0 0 0 cat,chimp,elephant,horse,human,macaque,orangutan,panda, lincRNA lincRNA A549@0.139271,AG04450@0.029507,BJ@0.114654,GM12878@0.069498,H1HESC@0.061948,HELAS3@0.131298,HEPG2@0.056238,HMEC@0.034033,HSMM@0.0462765,HUVEC@0.270466,K562@0.040414,MCF7@0.0914,NHEK@0.158808,NHLF@0.036377,SKNSHRA@0.139733, 0 0 0 0 ENSG00000226425.1 ENST00000444965.1 chr10:94819420-94820183 2 440 321 intergenic 0 0 0,1,1 0 0,0,0 0 0 104.959 0 0 125.498 0 0 131.307 0 0 cat,chimp,cow,dog,elephant,guinea_pig,horse,human,macaque,marmoset,orangutan,panda,pig, antisense antisense A549@0,AG04450@0,BJ@0.00557,GM12878@0,H1HESC@0.027992,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0.015472,HUVEC@0,K562@0.0111135,MCF7@0.0045485,NHEK@0,NHLF@0.008829,SKNSHRA@0.127729, 0 0 0 0 ENSG00000232913.1 ENST00000438899.1 chr10:95841707-95868537 8 937 25879 intronic 8.70 0 0,0,0 0 0,0,0 0 21.8940453649677 4.883 41.0608324439701 33.7644035704625 11.316 51.1995731056564 34.6045828664168 15.636 0 0 chimp,elephant,human,macaque,marmoset,orangutan, antisense antisense A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0.0012765,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000232913.1 ENST00000432782.1 chr10:95859405-95868542 3 1609 7524 intronic -2.48 1 0,0,0 0 0,0,0 0 16.4294258373206 6.168 4.49409571162213 29.941254651781 13.496 8.1491609695463 31.3379851143009 17.796 0 0 chimp,human,macaque,marmoset,panda, antisense antisense A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0.0012765,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000232913.1 ENST00000419353.1 chr10:95860253-95867629 3 455 6917 intronic 6.31 0 0,0,0 0 0,0,0 0 17.8711869307503 0 11.8483516483516 32.5687436750036 0 24.5450549450549 34.0880439496892 0 0 0 cat,chimp,horse,human,macaque,marmoset,panda, antisense antisense A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0.0012765,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000232913.1 ENST00000453183.1 chr10:95863883-95868506 4 423 4194 intronic 6.06 0 0,0,0 0 0,0,0 0 7.0963280877444 0 17.2127659574468 20.4015259895088 8.7 31.0023640661939 21.1628516928946 13.044 0 0 cat,chimp,dog,elephant,guinea_pig,horse,human,macaque,marmoset,mouse,orangutan,pig,rabbit, antisense antisense A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0.0012765,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000232913.1 ENST00000433038.1 chr10:95867350-95868232 2 394 486 intronic 6.73 0 0,0,0 0 0,0,0 0 0 0 0 0 0 0 0 0 0 0 cat,chimp,dog,guinea_pig,horse,human,macaque,marmoset,orangutan, antisense antisense A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0.0012765,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000231575.1 ENST00000432707.1 chr10:95868873-95880864 2 444 11545 intronic -1.33 0 0,0,0 0 0,0,0 0 15.9689909051537 0 0 27.9974014724989 0 0 29.301515807709 0 0 0 chimp,cow,dog,guinea_pig,horse,human,macaque,marmoset,orangutan,panda,pig,rabbit, sense_intronic sense_intronic A549@0.0113955,AG04450@0.009028,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0.019028, 0 0 0 0 ENSG00000228553.1 ENST00000447227.1 chr10:95984917-95987045 2 382 1744 intronic -4.77 0 0,0,0 0 0,0,0 0 0 73.006 0 2.28899082568807 79.808 0 2.31766055045872 85.811 0 0 chimp,dog,human,macaque,marmoset,orangutan, antisense antisense A549@0,AG04450@0.015419,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000241714.1 ENST00000425267.1 chr10:96039763-96043218 3 434 3017 intronic 1.67 0 0,0,1 0 0,0,0 0 18.2485913158767 40.016 24.5483870967742 25.4610540271793 92.901 24.2764976958525 29.8538283062645 89.115 0 0 cat,chimp,dog,elephant,horse,human,macaque,marmoset,orangutan,panda,pig, antisense antisense A549@0,AG04450@0.13131,BJ@0.203672,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@4.02871,HUVEC@0.0791975,K562@0,MCF7@0,NHEK@0,NHLF@0.0493365,SKNSHRA@0.005201, 0 0 0 0 ENSG00000229130.2 ENST00000440198.1 chr10:96042918-96046828 2 555 3353 intronic -4.13 0 0,0,0 0 0,0,0 0 35.6224276767074 0 20.2900900900901 51.6382344169401 0 21.6936936936937 54.0852967491798 0 0 0 cat,chimp,cow,dog,elephant,guinea_pig,horse,human,macaque,marmoset,mouse,orangutan,panda,pig,rabbit,rat, antisense antisense A549@0.004959,AG04450@0.139888,BJ@0.208612,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0.517691,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0.075648,SKNSHRA@0.0081465, 0 0 0 0 ENSG00000231829.1 ENST00000422744.1 chr10:96901682-96928182 5 416 26076 intergenic -2.64 0 0,0,0 0 0,0,0 0 0 0 0 0 0 0 0 0 0 0 chimp,human,macaque, antisense antisense A549@0.0657505,AG04450@0.014691,BJ@0,GM12878@0.053016,H1HESC@0.391251,HELAS3@0.0099145,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0.05999,K562@0.005515,MCF7@0.354233,NHEK@0.078873,NHLF@0.004583,SKNSHRA@0.0763205, 0 0 0 0 ENSG00000234026.1 ENST00000451737.1 chr10:96988000-96990901 2 661 2238 intronic -1.38 0 0,1,0 1 0,0,0 0 3.82886505808758 0 0 12.78418230563 0 0 14.0227882037534 0 0 0 chimp,human,macaque,marmoset,orangutan, lincRNA processed_transcript A549@0.12642,AG04450@0.280807,BJ@0.346898,GM12878@0.232747,H1HESC@3.42412,HELAS3@0.182578,HEPG2@0.200877,HMEC@0.012352,HSMM@0.0031035,HUVEC@0.330474,K562@0.0245205,MCF7@2.69654,NHEK@0.807918,NHLF@0.245958,SKNSHRA@0.849767, 0 0 0 0 ENSG00000226688.1 ENST00000416301.1 chr10:97512963-97849971 6 4235 332763 exonic 2.14 0 0,1,1 1 0,0,0 40.8916174734357 11.7879211330587 0 61.3220779220779 17.1274089967935 16.532 55.6531286894923 23.1487034315714 16.337 0 0 chimp,dog,human,macaque,marmoset,orangutan, processed_transcript processed_transcript A549@3.60142,AG04450@1.98316,BJ@1.54255,GM12878@6.44867,H1HESC@2.35799,HELAS3@7.11409,HEPG2@3.80048,HMEC@2.18446,HSMM@0.945344,HUVEC@1.14539,K562@5.1715,MCF7@1.96609,NHEK@2.89393,NHLF@1.42353,SKNSHRA@3.59452, 0 0 0 0 ENSG00000226688.1 ENST00000451364.1 chr10:97621070-97849912 4 712 228124 exonic 1.03 0 0,1,0 1 0,0,0 4.9438202247191 14.3576256772632 0 10.9915730337079 20.8205888025811 18.332 17.7963483146067 26.504681664358 18.137 0 0 chimp,cow,dog,elephant,horse,human,macaque,marmoset,orangutan,pig, processed_transcript processed_transcript A549@3.60142,AG04450@1.98316,BJ@1.54255,GM12878@6.44867,H1HESC@2.35799,HELAS3@7.11409,HEPG2@3.80048,HMEC@2.18446,HSMM@0.945344,HUVEC@1.14539,K562@5.1715,MCF7@1.96609,NHEK@2.89393,NHLF@1.42353,SKNSHRA@3.59452, 0 0 0 0 ENSG00000226688.1 ENST00000449419.1 chr10:97634841-97667532 4 944 31741 exonic 3.62 0 0,1,0 1 0,0,0 35.5805084745763 8.36596200497779 0 7.47457627118644 11.7257175262279 8.138 12.1641949152542 20.9921237516146 8.19 0 0 chimp,elephant,human,macaque,marmoset,orangutan, processed_transcript processed_transcript A549@3.60142,AG04450@1.98316,BJ@1.54255,GM12878@6.44867,H1HESC@2.35799,HELAS3@7.11409,HEPG2@3.80048,HMEC@2.18446,HSMM@0.945344,HUVEC@1.14539,K562@5.1715,MCF7@1.96609,NHEK@2.89393,NHLF@1.42353,SKNSHRA@3.59452, 0 0 0 0 ENSG00000226688.1 ENST00000452728.1 chr10:97635145-97849955 6 852 213948 exonic 3.62 0 0,1,0 1 0,0,0 42.4589201877934 14.5147045076374 0 12 21.6003842055079 18.332 17.5269953051643 27.5056836240582 18.137 0 0 chimp,dog,elephant,horse,human,macaque,marmoset,orangutan,pig,rabbit, processed_transcript processed_transcript A549@3.60142,AG04450@1.98316,BJ@1.54255,GM12878@6.44867,H1HESC@2.35799,HELAS3@7.11409,HEPG2@3.80048,HMEC@2.18446,HSMM@0.945344,HUVEC@1.14539,K562@5.1715,MCF7@1.96609,NHEK@2.89393,NHLF@1.42353,SKNSHRA@3.59452, 0 0 0 0 ENSG00000226688.1 ENST00000452942.1 chr10:97635157-97667639 5 741 31733 exonic -3.32 0 0,1,0 1 0,0,0 45.3279352226721 8.36807109318375 0 9.52226720647773 11.7286736205212 8.138 15.4966261808367 20.9974159392431 8.19 0 0 chimp,human,macaque,marmoset,orangutan, processed_transcript processed_transcript A549@3.60142,AG04450@1.98316,BJ@1.54255,GM12878@6.44867,H1HESC@2.35799,HELAS3@7.11409,HEPG2@3.80048,HMEC@2.18446,HSMM@0.945344,HUVEC@1.14539,K562@5.1715,MCF7@1.96609,NHEK@2.89393,NHLF@1.42353,SKNSHRA@3.59452, 0 0 0 0 ENSG00000226688.1 ENST00000414006.1 chr10:97635283-97667620 4 587 31744 exonic -7.94 0 0,1,0 1 0,0,0 55.6303236797274 8.39456275201613 0 10.5178875638842 11.7523941532258 8.138 18.0545144804089 21.0180191532258 8.19 0 0 chimp,dog,elephant,horse,human,macaque,marmoset,orangutan,panda, processed_transcript processed_transcript A549@3.60142,AG04450@1.98316,BJ@1.54255,GM12878@6.44867,H1HESC@2.35799,HELAS3@7.11409,HEPG2@3.80048,HMEC@2.18446,HSMM@0.945344,HUVEC@1.14539,K562@5.1715,MCF7@1.96609,NHEK@2.89393,NHLF@1.42353,SKNSHRA@3.59452, 0 0 0 0 ENSG00000226688.1 ENST00000427300.1 chr10:97664413-97667640 2 387 2838 intergenic 0 0 1,1,1 1 0,0,0 90.8087855297158 10.7392529950669 0 18.2325581395349 0.310782241014799 8.138 18.2945736434109 0.31183932346723 8.19 0 0 chimp,dog,elephant,human,macaque,orangutan,pig, processed_transcript processed_transcript A549@3.60142,AG04450@1.98316,BJ@1.54255,GM12878@6.44867,H1HESC@2.35799,HELAS3@7.11409,HEPG2@3.80048,HMEC@2.18446,HSMM@0.945344,HUVEC@1.14539,K562@5.1715,MCF7@1.96609,NHEK@2.89393,NHLF@1.42353,SKNSHRA@3.59452, 0 0 0 0 ENSG00000226688.1 ENST00000454638.1 chr10:97678695-97849969 3 2930 168340 intronic 2.14 0 0,1,0 1 0,0,0 1.20136518771331 16.7017821076393 0 1.99658703071672 24.9953724604966 16.532 2.0938566552901 29.4656647261495 16.337 0 0 human, processed_transcript processed_transcript A549@3.60142,AG04450@1.98316,BJ@1.54255,GM12878@6.44867,H1HESC@2.35799,HELAS3@7.11409,HEPG2@3.80048,HMEC@2.18446,HSMM@0.945344,HUVEC@1.14539,K562@5.1715,MCF7@1.96609,NHEK@2.89393,NHLF@1.42353,SKNSHRA@3.59452, 0 0 0 0 ENSG00000226688.1 ENST00000458228.1 chr10:97778477-97849982 4 3270 68229 exonic 3.18 0 1,1,1 1 0,0,0 24.4553516819572 27.263289803456 0 63.9308868501529 32.9907224200853 16.532 65.1030581039755 36.1708804174178 16.337 0 0 chimp,human,macaque,marmoset,orangutan, processed_transcript processed_transcript A549@3.60142,AG04450@1.98316,BJ@1.54255,GM12878@6.44867,H1HESC@2.35799,HELAS3@7.11409,HEPG2@3.80048,HMEC@2.18446,HSMM@0.945344,HUVEC@1.14539,K562@5.1715,MCF7@1.96609,NHEK@2.89393,NHLF@1.42353,SKNSHRA@3.59452, 0 0 0 0 ENSG00000226688.1 ENST00000449197.1 chr10:97781035-97802602 3 520 21043 intronic -5.96 1 0,0,1 0 0,0,0 18.2865384615385 5.0474266977142 60.841 0 11.9913985648434 139.423 0 15.9093285177969 135.285 0 0 chimp,dog,horse,human,macaque,marmoset,orangutan, processed_transcript processed_transcript A549@3.60142,AG04450@1.98316,BJ@1.54255,GM12878@6.44867,H1HESC@2.35799,HELAS3@7.11409,HEPG2@3.80048,HMEC@2.18446,HSMM@0.945344,HUVEC@1.14539,K562@5.1715,MCF7@1.96609,NHEK@2.89393,NHLF@1.42353,SKNSHRA@3.59452, 0 0 0 0 ENSG00000226688.1 ENST00000427846.1 chr10:97802235-97849995 3 746 47010 encompassing 2.14 0 1,1,1 1 0,0,0 4.71849865951743 37.1075303126994 0 12.4383378016086 43.5553073814082 14.477 12.8820375335121 46.4370772176133 14.312 0 0 cow,dog,guinea_pig,horse,human,macaque,mouse,orangutan,pig,rabbit, processed_transcript processed_transcript A549@3.60142,AG04450@1.98316,BJ@1.54255,GM12878@6.44867,H1HESC@2.35799,HELAS3@7.11409,HEPG2@3.80048,HMEC@2.18446,HSMM@0.945344,HUVEC@1.14539,K562@5.1715,MCF7@1.96609,NHEK@2.89393,NHLF@1.42353,SKNSHRA@3.59452, 0 0 0 0 ENSG00000226688.1 ENST00000444375.1 chr10:97848666-97849956 2 615 673 intergenic 2.14 0 0,1,0 1 0,0,0 8.94308943089431 0 0 10.5365853658537 0 18.332 16.4146341463415 0 18.137 0 0 cat,chimp,cow,dog,elephant,horse,human,macaque,marmoset,orangutan,panda,pig,rabbit, processed_transcript processed_transcript A549@3.60142,AG04450@1.98316,BJ@1.54255,GM12878@6.44867,H1HESC@2.35799,HELAS3@7.11409,HEPG2@3.80048,HMEC@2.18446,HSMM@0.945344,HUVEC@1.14539,K562@5.1715,MCF7@1.96609,NHEK@2.89393,NHLF@1.42353,SKNSHRA@3.59452, 0 0 0 0 ENSG00000177853.9 ENST00000534948.1 chr10:97889472-97923508 7 8277 25747 intergenic 3.13 1 0,1,1 1 0,1,1 253.58523619669 8.87361634365169 0 264.334541500544 12.0089330795821 1.434 245.206354959526 14.6425991377636 0 0 0 chimp,dog,elephant,guinea_pig,horse,human,macaque,marmoset,mouse,orangutan,panda,pig, lincRNA processed_transcript A549@8.92917,AG04450@2.40136,BJ@1.37394,GM12878@8.07292,H1HESC@6.19853,HELAS3@4.0167,HEPG2@6.45348,HMEC@1.65867,HSMM@1.29559,HUVEC@0.962102,K562@12.6483,MCF7@3.27423,NHEK@2.82181,NHLF@1.43633,SKNSHRA@2.45808, 0 0 0 0 ENSG00000177853.9 ENST00000488700.1 chr10:97889492-97915776 6 723 25551 intergenic -4.50 0 0,1,0 1 0,1,1 141.112033195021 7.55289421157685 0 91.6417704011065 11.3422958005558 3.746 100.925311203319 13.7038472075457 2.312 0 0 chimp,cow,dog,horse,human,macaque,marmoset,orangutan,panda,pig,rabbit,rat, lincRNA processed_transcript A549@8.92917,AG04450@2.40136,BJ@1.37394,GM12878@8.07292,H1HESC@6.19853,HELAS3@4.0167,HEPG2@6.45348,HMEC@1.65867,HSMM@1.29559,HUVEC@0.962102,K562@12.6483,MCF7@3.27423,NHEK@2.82181,NHLF@1.43633,SKNSHRA@2.45808, 0 0 0 0 ENSG00000177853.9 ENST00000316045.5 chr10:97889656-97920530 8 3445 27415 intergenic 0.58 0 0,1,1 0 0,1,1 271.069666182874 33.5318621192778 0 313.785486211901 33.8872515046508 3.746 282.396806966618 35.6923217216852 2.312 0 0 cat,chimp,cow,dog,elephant,guinea_pig,horse,human,macaque,marmoset,mouse,orangutan,panda,pig,rabbit,rat, lincRNA processed_transcript A549@8.92917,AG04450@2.40136,BJ@1.37394,GM12878@8.07292,H1HESC@6.19853,HELAS3@4.0167,HEPG2@6.45348,HMEC@1.65867,HSMM@1.29559,HUVEC@0.962102,K562@12.6483,MCF7@3.27423,NHEK@2.82181,NHLF@1.43633,SKNSHRA@2.45808, 0 0 0 0 ENSG00000177853.9 ENST00000539666.1 chr10:97889813-97911323 5 480 21022 intergenic 4.11 0 0,1,0 1 0,1,1 114.05 6.71487013604795 45.72 183.8375 9.99319760251166 30.115 187.770833333333 12.315479021977 33.222 0 0 chimp,cow,dog,horse,human,macaque,marmoset,mouse,orangutan,panda,pig,rabbit,rat, lincRNA processed_transcript A549@8.92917,AG04450@2.40136,BJ@1.37394,GM12878@8.07292,H1HESC@6.19853,HELAS3@4.0167,HEPG2@6.45348,HMEC@1.65867,HSMM@1.29559,HUVEC@0.962102,K562@12.6483,MCF7@3.27423,NHEK@2.82181,NHLF@1.43633,SKNSHRA@2.45808, 0 0 0 0 ENSG00000177853.9 ENST00000478086.1 chr10:97889813-97917094 6 1573 25698 intergenic 4.11 1 0,1,1 1 0,1,1 462.420216147489 6.41536306327341 45.72 365.811188811189 10.4564946688458 30.115 351.769866497139 12.7435208965678 33.222 0 0 chimp,cow,dog,elephant,guinea_pig,horse,human,macaque,marmoset,mouse,opossum,orangutan,panda,pig,platypus,rabbit,rat, lincRNA processed_transcript A549@8.92917,AG04450@2.40136,BJ@1.37394,GM12878@8.07292,H1HESC@6.19853,HELAS3@4.0167,HEPG2@6.45348,HMEC@1.65867,HSMM@1.29559,HUVEC@0.962102,K562@12.6483,MCF7@3.27423,NHEK@2.82181,NHLF@1.43633,SKNSHRA@2.45808, 0 0 0 0 ENSG00000177853.9 ENST00000484770.1 chr10:97890436-97892666 2 466 1762 intergenic -1.68 0 0,0,1 0 0,1,1 130.931330472103 3.72417707150965 118.328 151.545064377682 18.4699205448354 163.196 177.371244635193 21.1299659477866 162.113 0 0 cat,chimp,cow,dog,elephant,guinea_pig,horse,human,macaque,marmoset,mouse,opossum,orangutan,panda,pig,rabbit, lincRNA retained_intron A549@8.92917,AG04450@2.40136,BJ@1.37394,GM12878@8.07292,H1HESC@6.19853,HELAS3@4.0167,HEPG2@6.45348,HMEC@1.65867,HSMM@1.29559,HUVEC@0.962102,K562@12.6483,MCF7@3.27423,NHEK@2.82181,NHLF@1.43633,SKNSHRA@2.45808, 0 0 0 0 ENSG00000177853.9 ENST00000371192.1 chr10:97915100-97923517 2 8267 148 intergenic 3.13 1 0,0,1 0 0,1,1 249.302286198137 116.472972972973 8.215 258.164630458449 126.831081081081 8.67 239.038587153744 144.945945945946 15.68 0 0 chimp,dog,elephant,guinea_pig,horse,human,macaque,marmoset,mouse,orangutan,panda,pig, lincRNA processed_transcript A549@8.92917,AG04450@2.40136,BJ@1.37394,GM12878@8.07292,H1HESC@6.19853,HELAS3@4.0167,HEPG2@6.45348,HMEC@1.65867,HSMM@1.29559,HUVEC@0.962102,K562@12.6483,MCF7@3.27423,NHEK@2.82181,NHLF@1.43633,SKNSHRA@2.45808, 0 0 0 0 ENSG00000233789.1 ENST00000442635.1 chr10:97963330-97963885 2 263 290 exonic -2.83 1 0,0,1 0 0,0,0 0 0 0 70.8479087452472 14.5379310344828 11.759 55.7376425855513 24.3241379310345 12.225 0 0 chimp,cow,dog,elephant,horse,human,macaque,marmoset,orangutan,pig,rabbit, antisense antisense A549@0.320863,AG04450@0.0435775,BJ@0.054791,GM12878@0.0417495,H1HESC@0,HELAS3@0.0088195,HEPG2@0.089802,HMEC@0.015451,HSMM@0,HUVEC@0,K562@0.0938455,MCF7@0,NHEK@0.00963433,NHLF@0,SKNSHRA@0.077129, 0 0 0 0 ENSG00000229418.1 ENST00000454484.1 chr10:98053537-98066452 4 820 12089 intronic -0.26 0 0,0,0 0 0,0,0 0 12.1122508065183 7.48 6.39512195121951 15.1650260567458 17.508 6.58048780487805 16.2122590785011 17.545 0 0 chimp,horse,human,macaque,marmoset,orangutan,panda, processed_transcript processed_transcript A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000231025.1 ENST00000421806.1 chr10:98752207-98755716 1 3509 0 intergenic 3.08 1 0,0,1 0 0,0,0 233.859789113708 0 132.88 313.130236534625 0 84.304 279.703334283272 0 97.571 0 0 chimp,elephant,horse,human,macaque,orangutan,pig,rabbit, antisense antisense A549@2.38016,AG04450@2.04291,BJ@1.94154,GM12878@2.65334,H1HESC@3.63265,HELAS3@4.3929,HEPG2@4.86212,HMEC@1.83584,HSMM@3.58638,HUVEC@2.88844,K562@2.00467,MCF7@3.59691,NHEK@2.38535,NHLF@2.6728,SKNSHRA@2.69249, 0 0 0 0 ENSG00000234855.1 ENST00000424428.1 chr10:98862513-98863504 3 686 301 intronic -1.71 0 0,0,0 0 0,0,0 72.198250728863 101.34219269103 0 6.69096209912536 20.5980066445183 0 14.2930029154519 22.5913621262458 0 0 0 chimp,dog,elephant,horse,human,macaque,marmoset,orangutan,panda, antisense antisense A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000225850.1 ENST00000445808.1 chr10:99094321-99102960 2 803 7834 exonic 10.89 1 0,1,0 0 0,0,0 0 28.1540719938729 85.44 61.0896637608966 48.4218789890222 159.169 68.3947696139477 49.0994383456727 136.303 0 0 chimp,dog,horse,human,orangutan,panda, antisense antisense A549@0.039017,AG04450@0.0129235,BJ@0.0243105,GM12878@0.0199745,H1HESC@0.730791,HELAS3@0.09132,HEPG2@0.198186,HMEC@0.015259,HSMM@0.0359855,HUVEC@0.0628005,K562@0.0384965,MCF7@0.0303095,NHEK@0.00327267,NHLF@0,SKNSHRA@0.026672, 0 0 0 0 ENSG00000231970.1 ENST00000422848.1 chr10:99160872-99179281 2 546 17861 exonic 4.44 0 0,1,0 0 0,0,0 86.043956043956 1.60819662952802 62.515 131.767399267399 2.47796875874811 111.562 130.789377289377 2.61245171043055 107.744 0 0 cat,chimp,cow,elephant,guinea_pig,horse,human,macaque,panda,pig, antisense antisense A549@0.0531035,AG04450@0.0203635,BJ@0.0044925,GM12878@0,H1HESC@0.148748,HELAS3@0.0775185,HEPG2@0.024951,HMEC@0.014944,HSMM@0.00416,HUVEC@0.006378,K562@0.178041,MCF7@0.20701,NHEK@0.0613877,NHLF@0.007121,SKNSHRA@0.277752, 0 0 0 0 ENSG00000227356.1 ENST00000427379.1 chr10:99588235-99609535 3 393 20903 intergenic 0 1 0,1,0 0 0,0,0 0 7.35171984882553 82.632 0 11.7420944362053 142.833 0 13.3608094531885 137.571 0 0 chimp,human,macaque,marmoset,orangutan,panda, antisense antisense A549@0.0313545,AG04450@0,BJ@0,GM12878@0,H1HESC@0.0052385,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0.0124045,MCF7@0.0255,NHEK@0.00644733,NHLF@0,SKNSHRA@0.0950295, 0 0 0 0 ENSG00000230928.1 ENST00000433374.1 chr10:100011780-100016332 2 1166 3384 exonic 7.41 1 0,0,0 0 0,0,0 23.4648370497427 49.6539598108747 98.659 58.7024013722127 75.5363475177305 137.265 52.5694682675815 75.5780141843971 149.437 0 0 chimp,cow,guinea_pig,human,macaque,marmoset,orangutan,rabbit, antisense antisense A549@0.312026,AG04450@0.150288,BJ@0.0802585,GM12878@0.622281,H1HESC@0.36487,HELAS3@0.575371,HEPG2@0.663135,HMEC@0.003506,HSMM@0.198342,HUVEC@0.399417,K562@0.14963,MCF7@0.0630435,NHEK@0.297515,NHLF@0.202692,SKNSHRA@0.533855, 0 0 0 0 ENSG00000224934.1 ENST00000416191.1 chr10:101190948-101195542 4 662 3926 intergenic -0.25 0 0,0,1 0 0,0,0 0 10.8680590932247 50.966 11.5468277945619 19.1245542536933 117.484 14.3761329305136 21.5624044829343 112.675 0 0 cat,chimp,dog,elephant,guinea_pig,horse,human,macaque,marmoset,orangutan,panda,pig,rabbit, antisense antisense A549@0.970877,AG04450@0.249101,BJ@0.235058,GM12878@1.19178,H1HESC@0.584662,HELAS3@1.17418,HEPG2@0.871214,HMEC@0.092221,HSMM@0.032228,HUVEC@0.18191,K562@3.03146,MCF7@0.367577,NHEK@0.225618,NHLF@0.0611335,SKNSHRA@0.715253, 0 0 0 0 ENSG00000228778.1 ENST00000452494.1 chr10:101286838-101288018 2 390 788 intergenic 0 0 0,1,0 0 0,0,0 0 0 17.925 0 0 24.262 0 0 24.086 0 0 human,macaque,marmoset,orangutan,pig, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000229278.1 ENST00000452391.1 chr10:101411746-101413662 2 301 1613 intergenic 0 0 0,0,1 0 0,0,0 0 0 25.334 0 0 25.731 0 0 31.649 0 0 chimp,horse,human,macaque,marmoset,orangutan,pig, antisense antisense A549@0.007164,AG04450@0.0677005,BJ@0.0081255,GM12878@0.0442495,H1HESC@0,HELAS3@0.007457,HEPG2@0.0090025,HMEC@0.013514,HSMM@0.050465,HUVEC@0.0080245,K562@0.156626,MCF7@0.0735895,NHEK@0.0938473,NHLF@0,SKNSHRA@0.129049, 0 0 0 0 ENSG00000227695.1 ENST00000427093.1 chr10:101686767-101689595 3 471 2353 exonic 0.67 0 0,0,0 0 0,0,0 0 6.91882702932427 0 0 19.0701232469188 3.113 0 21.2630684232894 3.179 0 0 cat,chimp,elephant,horse,human,marmoset,orangutan, antisense antisense A549@0.11868,AG04450@0.0047285,BJ@0,GM12878@0.004287,H1HESC@0,HELAS3@0.0037205,HEPG2@0.0077575,HMEC@0,HSMM@0,HUVEC@0.0457505,K562@0,MCF7@0,NHEK@0.00937733,NHLF@0,SKNSHRA@0.0095815, 0 0 0 0 ENSG00000227695.1 ENST00000434409.1 chr10:101686966-101718138 5 2029 29135 exonic 2.01 1 0,1,1 1 0,0,0 122.33070478068 5.1529775184486 0 105.995071463775 10.890852926034 3.113 112.891572203056 13.3145014587266 3.179 0 0 chimp,human,macaque,marmoset,orangutan, antisense non_coding A549@0.11868,AG04450@0.0047285,BJ@0,GM12878@0.004287,H1HESC@0,HELAS3@0.0037205,HEPG2@0.0077575,HMEC@0,HSMM@0,HUVEC@0.0457505,K562@0,MCF7@0,NHEK@0.00937733,NHLF@0,SKNSHRA@0.0095815, 0 0 0 0 ENSG00000236308.1 ENST00000443919.1 chr10:101949793-101950504 2 576 133 intronic 0 0 0,1,1 0 0,0,0 0 0 12.189 21.0607638888889 0 39.308 15.1788194444444 0 30.02 0 0 cat,chimp,cow,dog,elephant,guinea_pig,horse,human,macaque,marmoset,orangutan,panda,pig, antisense antisense A549@0.0595615,AG04450@0.016952,BJ@0,GM12878@0.257811,H1HESC@0.050534,HELAS3@0.46964,HEPG2@0.065701,HMEC@0.007084,HSMM@0,HUVEC@0,K562@0.560164,MCF7@0.077391,NHEK@0.0469563,NHLF@0,SKNSHRA@0.102346, 0 0 0 0 ENSG00000227492.1 ENST00000444359.1 chr10:101989424-101993757 5 841 3484 exonic -1.85 0 0,1,0 0 0,0,0 62.5826397146254 8.54334098737084 75.775 89.0986920332937 9.07060849598163 104.686 95.4601664684899 12.215269804822 105.276 0 0 chimp,human,macaque,marmoset,orangutan, antisense antisense A549@0.044506,AG04450@0.021273,BJ@0.031368,GM12878@0.07911,H1HESC@0.021738,HELAS3@0.155214,HEPG2@0.155103,HMEC@0.00968,HSMM@0.02859,HUVEC@0.034697,K562@0.02137,MCF7@0.168192,NHEK@0.03202,NHLF@0.013838,SKNSHRA@0.0192845, 0 0 0 0 ENSG00000231188.1 ENST00000429420.1 chr10:102095320-102106147 4 467 10354 intergenic -1.02 0 0,0,1 0 0,0,0 0 6.10817075526367 66.725 0 4.89926598416071 94.038 0 4.89511299980684 102.426 0 0 chimp,human,macaque,marmoset,orangutan, antisense antisense A549@0.0046085,AG04450@0,BJ@0,GM12878@0.0277345,H1HESC@0.018929,HELAS3@0.0177245,HEPG2@0.090709,HMEC@0,HSMM@0,HUVEC@0.0103245,K562@0.0336365,MCF7@0.008537,NHEK@0.00542067,NHLF@0,SKNSHRA@0.009634, 0 0 0 0 ENSG00000235823.1 ENST00000454935.1 chr10:102133372-102143125 2 2549 7202 intergenic 9.64 0 1,1,1 1 0,0,0 0 0 63.36 0 3.30574840322133 39.649 0 3.62565953901694 44.863 0 0 chimp,human,macaque,orangutan, lincRNA processed_transcript A549@1.72303,AG04450@0.436526,BJ@0.51217,GM12878@2.79849,H1HESC@6.57757,HELAS3@3.79339,HEPG2@3.74158,HMEC@0.839609,HSMM@0.610267,HUVEC@2.42822,K562@4.32861,MCF7@4.48386,NHEK@0.64913,NHLF@0.383938,SKNSHRA@3.1926, 0 0 0 0 ENSG00000236662.1 ENST00000447344.1 chr10:102740264-102745371 2 340 4765 exonic -0.27 0 0,1,0 0 0,0,0 165.076470588235 127.712277019937 0 409.4 200.546065057713 3.98 325.211764705882 172.401259181532 5.279 0 0 cat,cow,dog,elephant,guinea_pig,horse,human,macaque,mouse,opossum,orangutan,panda,rabbit,rat, processed_transcript processed_transcript A549@0,AG04450@0,BJ@0,GM12878@0.053981,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0.007082,NHLF@0,SKNSHRA@0.01319, 0 0 0 0 ENSG00000236311.1 ENST00000445873.1 chr10:102849078-102890883 3 1859 39942 exonic 2.75 1 0,1,0 0 0,0,1 48.375470683163 18.5178258474788 245.649 71.4857450242065 33.120199288969 460.181 145.270575578268 31.407941515197 451.253 0 0 chimp,cow,dog,horse,human,macaque,marmoset,orangutan,pig, lincRNA processed_transcript A549@0.002401,AG04450@0,BJ@0.006952,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0.0176445,HMEC@0,HSMM@0,HUVEC@0,K562@0.027899,MCF7@0.019895,NHEK@0.00104633,NHLF@0,SKNSHRA@0.003659, 0 0 0 0 ENSG00000236311.1 ENST00000425505.1 chr10:102850065-102890883 3 901 39913 exonic 2.75 0 0,1,1 0 0,0,1 91.3096559378468 18.2166712599905 245.649 66.284128745838 32.8180292135394 460.181 62.3285238623751 31.1168792122867 451.253 0 0 chimp,cow,dog,elephant,horse,human,marmoset,orangutan, lincRNA processed_transcript A549@0.002401,AG04450@0,BJ@0.006952,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0.0176445,HMEC@0,HSMM@0,HUVEC@0,K562@0.027899,MCF7@0.019895,NHEK@0.00104633,NHLF@0,SKNSHRA@0.003659, 0 0 0 0 ENSG00000236311.1 ENST00000441069.1 chr10:102874956-102901023 3 757 25306 encompassing 0.26 0 0,0,1 0 0,0,1 0 37.8050659922548 0 36.0290620871863 63.7530625148186 4.128 35.6829590488771 61.5147000711294 4.188 0 0 cat,chimp,cow,dog,guinea_pig,horse,human,macaque,marmoset,orangutan,panda,pig,rabbit, lincRNA processed_transcript A549@0.002401,AG04450@0,BJ@0.006952,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0.0176445,HMEC@0,HSMM@0,HUVEC@0,K562@0.027899,MCF7@0.019895,NHEK@0.00104633,NHLF@0,SKNSHRA@0.003659, 0 0 0 0 ENSG00000226740.1 ENST00000411459.1 chr10:102896232-102899468 2 814 2420 exonic 9.47 0 0,0,0 0 0,0,0 122.542997542998 30.2376033057851 0 194.041769041769 32.3082644628099 7.275 170.519656019656 31.4363636363636 8.919 0 0 cow,dog,horse,human,macaque,marmoset,opossum,orangutan,panda,rabbit, antisense antisense A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0.006505,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0.0086,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000237579.1 ENST00000434189.1 chr10:102941447-102953904 4 845 11606 intergenic 1.66 0 0,0,0 0 0,0,0 18.7810650887574 3.47458211270033 0 34.785798816568 9.06453558504222 0 64.6426035502959 16.6848181974841 187.528 0 0 cat,chimp,elephant,horse,human,marmoset,orangutan, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000227128.2 ENST00000454527.1 chr10:102992009-102998249 3 551 5685 intergenic 7.61 0 0,0,1 0 0,0,0 0 1.59753737906772 0 0 9.86437994722955 0 0 12.0008795074758 0 0 0 chimp,human,macaque,marmoset,orangutan, lincRNA processed_transcript A549@0.006437,AG04450@0.011979,BJ@0.0019285,GM12878@0.007488,H1HESC@0.0009695,HELAS3@0,HEPG2@0,HMEC@0.007391,HSMM@0.0784365,HUVEC@0,K562@0,MCF7@0.002398,NHEK@0.00230433,NHLF@0.0015205,SKNSHRA@0, 0 0 0 0 ENSG00000227128.2 ENST00000430651.1 chr10:102995825-102998605 2 2551 227 intergenic 7.61 1 0,0,0 0 0,0,0 13.2716581732654 0 0 40.9270874166993 0 0 44.9917679341435 0 0 0 0 cat,chimp,cow,dog,human,macaque,marmoset,orangutan,panda, lincRNA processed_transcript A549@0.006437,AG04450@0.011979,BJ@0.0019285,GM12878@0.007488,H1HESC@0.0009695,HELAS3@0,HEPG2@0,HMEC@0.007391,HSMM@0.0784365,HUVEC@0,K562@0,MCF7@0.002398,NHEK@0.00230433,NHLF@0.0015205,SKNSHRA@0, 0 0 0 0 ENSG00000227128.2 ENST00000434878.1 chr10:102997695-103029905 3 415 31791 intergenic -3.06 1 0,0,0 0 0,0,0 0 37.049196313422 0 0 45.998018307068 0 0 45.1966908873581 0 0 0 human, lincRNA processed_transcript A549@0.006437,AG04450@0.011979,BJ@0.0019285,GM12878@0.007488,H1HESC@0.0009695,HELAS3@0,HEPG2@0,HMEC@0.007391,HSMM@0.0784365,HUVEC@0,K562@0,MCF7@0.002398,NHEK@0.00230433,NHLF@0.0015205,SKNSHRA@0, 0 0 0 0 ENSG00000227128.2 ENST00000456391.1 chr10:102997760-102998616 3 418 434 intergenic 0.05 1 0,0,0 0 0,0,0 90.6794258373206 0 0 219.124401913876 0 0 230.11961722488 0 0 0 0 cat,chimp,cow,dog,elephant,guinea_pig,horse,human,macaque,marmoset,mouse,orangutan,panda,pig,rabbit, lincRNA processed_transcript A549@0.006437,AG04450@0.011979,BJ@0.0019285,GM12878@0.007488,H1HESC@0.0009695,HELAS3@0,HEPG2@0,HMEC@0.007391,HSMM@0.0784365,HUVEC@0,K562@0,MCF7@0.002398,NHEK@0.00230433,NHLF@0.0015205,SKNSHRA@0, 0 0 0 0 ENSG00000229649.1 ENST00000422661.1 chr10:103012578-103023307 3 2219 8506 intergenic -1.87 0 0,0,0 0 0,0,0 51.5263632266787 50.2692217258406 27.896 29.4943668319063 69.1578885492593 22.632 29.2604776926543 63.3608041382554 22.796 0 0 chimp,human,macaque,orangutan, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0.0080245,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0.082978,SKNSHRA@0, 0 0 0 0 ENSG00000225208.1 ENST00000442188.1 chr10:103070775-103071262 2 380 105 intergenic -3.96 0 0,1,0 0 0,0,0 363.684210526316 225.238095238095 161.7 109.281578947368 17.9047619047619 199.521 94.0342105263158 18.5142857142857 175.938 0 0 chimp,dog,human,macaque,marmoset,mouse,orangutan,panda,pig,rat, lincRNA lincRNA A549@0,AG04450@0,BJ@0.02578,GM12878@0,H1HESC@0.0184795,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0.0107645,NHEK@0,NHLF@0,SKNSHRA@0.252938, 0 0 0 0 ENSG00000230967.1 ENST00000450669.1 chr10:103082400-103082763 2 280 81 intergenic -0.41 0 0,0,1 0 0,0,0 591 591 78.603 773 773 104.367 785 785 96.327 0 0 cat,chimp,cow,dog,elephant,guinea_pig,human,macaque,marmoset,mouse,opossum,orangutan,panda,pig,platypus,rabbit,rat, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000224817.1 ENST00000458489.1 chr10:103464409-103468158 2 289 3458 intergenic 0 0 0,0,0 0 0,0,0 504.615916955017 65.9817813765182 128.535 656.553633217993 72.7562174667438 168.01 660.636678200692 79.5841526894158 169.063 0 0 cat,chimp,cow,dog,elephant,guinea_pig,horse,human,macaque,marmoset,mouse,opossum,orangutan,panda,pig,platypus,rabbit,rat, lincRNA lincRNA A549@0.405933,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@1.15301,HEPG2@0.234342,HMEC@0,HSMM@0,HUVEC@0,K562@0.312252,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000229793.1 ENST00000437697.1 chr10:103570752-103571371 2 304 313 intronic -5.19 0 0,1,0 0 0,0,0 0 0 56.092 0 0 93.536 0 0 106.203 0 0 chimp,human,marmoset,orangutan, antisense antisense A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 2 44 0 0 ENSG00000226009.1 ENST00000412353.1 chr10:103578835-103588536 3 847 8850 exonic 3.48 0 0,0,1 0 0,0,0 158.648170011806 27.8053107344633 97.797 193.295159386068 34.4736723163842 153.695 195.919716646989 33.5623728813559 141.301 0 0 cat,chimp,cow,dog,elephant,horse,human,macaque,opossum,orangutan,panda,pig,rat, antisense antisense A549@0.0677655,AG04450@0.0448185,BJ@0.069759,GM12878@0.310535,H1HESC@0.362665,HELAS3@0.609654,HEPG2@0.716484,HMEC@0.081892,HSMM@0.035852,HUVEC@0.062038,K562@0.633765,MCF7@0.0526795,NHEK@0.074099,NHLF@0.038896,SKNSHRA@0.226836, 0 0 0 0 ENSG00000248959.1 ENST00000507720.1 chr10:103596053-103599032 2 2270 707 intronic 1.50 0 0,0,0 0 0,0,0 18.8022026431718 0 29.85 34.231718061674 0 26.808 31.9903083700441 0 29.524 1 1 chimp,human,macaque,marmoset,orangutan, lincRNA lincRNA A549@0.002969,AG04450@0.002606,BJ@0,GM12878@0.0023375,H1HESC@0.002616,HELAS3@0.013323,HEPG2@0.0193245,HMEC@0,HSMM@0,HUVEC@0,K562@0.0070705,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000228091.1 ENST00000440123.1 chr10:103880410-103881139 2 372 355 intergenic -5.30 0 1,1,1 1 0,0,0 80.3333333333333 72.2478873239437 271.567 175.846774193548 185.625352112676 369.277 147.967741935484 155.416901408451 327.629 0 0 cow,dog,elephant,horse,human,macaque,marmoset,mouse,orangutan,panda,pig,rabbit,rat, antisense antisense A549@0.0328055,AG04450@0.034418,BJ@0.097993,GM12878@0.0383925,H1HESC@0.050563,HELAS3@0.040468,HEPG2@0.022961,HMEC@0.010948,HSMM@0.006095,HUVEC@0.0144585,K562@0.0496665,MCF7@0.027,NHEK@0.00341333,NHLF@0.010434,SKNSHRA@0.12483, 0 0 0 0 ENSG00000245773.2 ENST00000501575.1 chr10:104209595-104216051 3 1284 5168 exonic -2.79 0 1,1,1 0 0,0,0 0 2.72445820433437 0 0 23.4945820433437 0 0 25.4522058823529 0 1 1 chimp,human,macaque,marmoset,orangutan, lincRNA lincRNA A549@2.34422,AG04450@0.666076,BJ@0.88998,GM12878@9.3728,H1HESC@10.7897,HELAS3@12.2188,HEPG2@7.52623,HMEC@2.63587,HSMM@0.168847,HUVEC@0.872548,K562@19.9719,MCF7@7.42324,NHEK@1.3933,NHLF@0.455245,SKNSHRA@2.75266, 0 0 0 0 ENSG00000203886.4 ENST00000369884.4 chr10:104592478-104594273 2 489 1304 intronic 3.08 1 0,0,1 0 0,0,0 0 6.41104294478528 22.644 0 25.3895705521472 52.426 0 52.4302147239264 69.581 0 0 cat,cow,dog,horse,human,macaque,marmoset,orangutan,panda, antisense antisense A549@0.095371,AG04450@0.036176,BJ@0.054557,GM12878@0,H1HESC@0.0355635,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0.0251435,HUVEC@0.009904,K562@0.0589335,MCF7@0.061357,NHEK@0.0752813,NHLF@0.213926,SKNSHRA@0.108477, 0 0 0 0 ENSG00000244967.1 ENST00000499348.1 chr10:104958490-105036751 2 1550 76709 intergenic 1.81 0 0,1,0 0 0,0,0 0 4.69201788577612 504.96 6.19548387096774 8.98796751359033 514.043 6.23870967741936 28.4065233544956 576.35 1 1 chimp,human,macaque,marmoset,orangutan, lincRNA lincRNA A549@0.0850075,AG04450@0.0165885,BJ@0.0125825,GM12878@0,H1HESC@0.0503065,HELAS3@0,HEPG2@0.0070305,HMEC@0,HSMM@0.005875,HUVEC@0,K562@0,MCF7@0.0104805,NHEK@0.015706,NHLF@0.0024865,SKNSHRA@0.055276, 0 0 0 0 ENSG00000234699.1 ENST00000411906.1 chr10:105212603-105222452 2 655 9192 exonic 3.56 1 0,0,1 0 0,0,0 0 21.9143820713664 35.453 0 49.4857484769365 12.446 0 52.0735422106179 16.203 0 0 chimp,horse,human,orangutan, antisense antisense A549@0.0940125,AG04450@0.100447,BJ@0.390535,GM12878@0.933191,H1HESC@0.164075,HELAS3@0.0492665,HEPG2@0.023093,HMEC@0.012465,HSMM@0.083025,HUVEC@0.143577,K562@0.00815,MCF7@0.163987,NHEK@0.0169337,NHLF@0.171492,SKNSHRA@0.185636, 0 0 0 0 ENSG00000235470.1 ENST00000453753.1 chr10:105239360-105277150 4 636 37148 intronic 5.81 1 0,0,0 0 0,0,0 0 7.802681167223 0 20.6761006289308 14.5858188866157 0 23.3993710691824 15.8243781630236 0 0 0 chimp,cow,horse,human,macaque,orangutan, antisense antisense A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000235470.1 ENST00000447820.1 chr10:105271536-105275159 2 437 3184 intronic -1.56 0 0,0,0 0 0,0,0 0 26.2923994974874 0 3.97254004576659 31.3008793969849 20.706 4.02059496567506 33.4949748743719 19.073 0 0 cat,chimp,cow,dog,horse,human,macaque,marmoset,orangutan,panda, antisense antisense A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000226431.1 ENST00000457120.1 chr10:105308832-105310721 2 522 1365 intronic 6.33 0 0,0,0 0 0,0,0 0 38.4 22.392 6.83333333333333 68.9238095238095 41.373 7.02490421455939 71.1567765567765 42.059 0 0 cat,chimp,cow,elephant,horse,human,macaque,marmoset,orangutan,pig, sense_intronic sense_intronic A549@0,AG04450@0.004918,BJ@0,GM12878@0.0050675,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0.016139,K562@0,MCF7@0.040006,NHEK@0,NHLF@0,SKNSHRA@0.0267075, 0 0 0 0 ENSG00000228261.1 ENST00000434792.1 chr10:106083127-106086762 3 951 2680 intronic 1.61 0 0,0,1 0 0,0,0 0 0 36.387 1.60883280757098 6.56231343283582 11.241 4.78548895899054 7.35149253731343 11.478 0 0 chimp,cow,horse,human,macaque,marmoset,orangutan,pig, lincRNA lincRNA A549@0.0598725,AG04450@0,BJ@0,GM12878@0,H1HESC@0.0139875,HELAS3@0.0268675,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0.0761385,K562@0.01366,MCF7@0.218494,NHEK@0.167172,NHLF@0.004045,SKNSHRA@0, 0 0 0 0 ENSG00000231233.1 ENST00000435434.1 chr10:106111349-106113333 2 793 1189 intergenic -0.59 0 0,1,1 1 0,0,0 0 15.3574432296047 24.108 0 11.4331370899916 47.726 0 11.6148023549201 51.937 0 0 chimp,dog,horse,human,macaque,marmoset,orangutan,panda,pig, antisense antisense A549@0.139037,AG04450@0.094754,BJ@0.030679,GM12878@0.0345935,H1HESC@0.296526,HELAS3@0,HEPG2@0.00536,HMEC@0.11331,HSMM@0,HUVEC@0.055418,K562@1.18753,MCF7@0.144027,NHEK@0.118714,NHLF@0.168422,SKNSHRA@0.724499, 0 0 0 0 ENSG00000225768.1 ENST00000447860.1 chr10:106234697-106240032 3 1010 4321 intergenic -0.71 1 0,0,0 0 0,0,0 26.780198019802 40.8845174728072 131.705 64.6584158415842 55.1962508678547 224.457 60.2623762376238 57.9208516547096 228.425 0 0 chimp,cow,dog,elephant,horse,human,macaque,marmoset,orangutan,panda,pig,rabbit, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0.132204,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000237761.1 ENST00000450054.1 chr10:106375860-106376731 2 367 502 intergenic 4.17 1 0,0,0 0 0,0,0 0 0 22.576 0 3.80876494023904 1.912 4.63487738419619 3.87250996015936 2.008 0 0 chimp,human,macaque,marmoset, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000226387.1 ENST00000449805.1 chr10:106424368-106425974 2 1518 86 intronic 5.70 0 0,0,0 0 0,0,0 3.5197628458498 0 55.485 13.5177865612648 79.3255813953488 83.262 13.0184453227931 42.2093023255814 82.747 0 0 cat,chimp,elephant,horse,human,macaque,marmoset,orangutan, antisense antisense A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000236043.1 ENST00000429680.1 chr10:107249354-107262113 3 447 12308 intergenic -2.48 0 0,0,0 0 0,0,0 32.6152125279642 9.75243743906402 9.799 16.1252796420582 33.5145433864153 7.72 22.331096196868 37.0728794280143 13.662 0 0 chimp,guinea_pig,horse,human,macaque,marmoset,orangutan, lincRNA lincRNA A549@0.0048235,AG04450@0,BJ@0,GM12878@0.057402,H1HESC@0,HELAS3@0,HEPG2@0.00967,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000229466.1 ENST00000447757.1 chr10:107568533-107578955 3 453 9965 intergenic 0 0 0,0,0 0 0,0,0 16.8167770419426 7.22468640240843 0 14.0132450331126 9.65218263923733 0 23.112582781457 11.9296537882589 0 0 0 cat,chimp,cow,dog,horse,human,macaque,marmoset,orangutan,pig, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0.0410125,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000229775.1 ENST00000449761.1 chr10:107900022-107948480 5 458 47992 intergenic -0.99 0 0,0,0 0 0,0,0 0 3.46776546091015 0 91.6266375545852 8.08093015502584 0 65.9519650655022 8.59414069011502 0 0 0 cat,chimp,cow,dog,elephant,guinea_pig,horse,human,macaque,marmoset,orangutan,panda,pig,rabbit, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0.0049505,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000229775.1 ENST00000424701.1 chr10:107900049-107917903 2 549 17303 intergenic 1.35 1 0,0,0 0 0,0,0 0 2.90990001733803 0 0 4.01126972201352 0 0 5.8066809223834 0 0 0 chimp,dog,elephant,horse,human,macaque,marmoset,orangutan,panda, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0.0049505,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000229775.1 ENST00000452286.1 chr10:107923106-107948378 4 661 24605 intergenic 4.16 0 0,0,1 0 0,0,0 0 4.71753708595814 0 61.0136157337368 13.0074375127007 0 43.482602118003 12.7389148547043 0 0 0 chimp,human,macaque,orangutan,pig,rat, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0.0049505,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000229775.1 ENST00000426752.1 chr10:107944143-107959138 2 681 14312 intergenic -5.19 0 0,0,0 0 0,0,0 0 8.93788429290106 0 0 18.2091950810509 3.044 0 17.4369759642258 3.124 0 0 chimp,human,macaque,marmoset,orangutan, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0.0049505,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000230151.1 ENST00000429110.1 chr10:109136308-109160994 4 524 24156 intergenic 2.91 0 0,1,0 0 0,0,0 0 0.875972843185958 0 0 1.52069879119059 0 0 2.408014571949 0 0 0 chimp,human,macaque,marmoset,orangutan, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000229981.1 ENST00000425050.1 chr10:109631334-109829052 5 717 196993 intergenic -0.15 1 0,0,0 0 0,0,0 0 0.783890798150188 0 0 1.67431837679511 0 0 3.0766981567873 0 0 0 chimp,cow,dog,horse,human,macaque,marmoset,orangutan,pig, lincRNA lincRNA A549@0,AG04450@0,BJ@0.0336645,GM12878@0.729769,H1HESC@0.006904,HELAS3@0,HEPG2@0,HMEC@0.005671,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0.02434, 0 0 0 0 ENSG00000203434.2 ENST00000366253.2 chr10:110307733-110321573 3 572 13264 intergenic -8.44 0 0,0,1 0 0,0,0 0 4.05579010856454 0 0 2.58835946924005 0 0 5.15922798552473 0 0 0 chimp,human,macaque,marmoset,orangutan, lincRNA lincRNA A549@0,AG04450@0,BJ@0.0210085,GM12878@0.719235,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0.0039645,HUVEC@0.0103515,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0.015797, 1 96 0 0 ENSG00000223381.1 ENST00000421481.1 chr10:110470276-110599121 3 477 128364 intergenic -0.73 0 0,0,0 0 0,0,0 0 1.73203546165592 0 0 3.917523604749 0 0 4.96181172291297 0 0 0 chimp,human,macaque,orangutan, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0.0450205,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000228417.1 ENST00000451656.1 chr10:111967608-111968349 3 467 270 exonic -7.42 0 0,0,1 0 0,0,0 334.460385438972 213.548148148148 99.153 461.237687366167 391.040740740741 133.179 456.423982869379 335.507407407407 117.573 0 0 cat,chimp,cow,dog,elephant,guinea_pig,horse,human,macaque,marmoset,mouse,opossum,panda,pig,rat, antisense antisense A549@0.034165,AG04450@0,BJ@0.0682885,GM12878@0.0148,H1HESC@0,HELAS3@0.0112935,HEPG2@0.0092585,HMEC@0,HSMM@0,HUVEC@0,K562@0.005799,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0.03295, 0 0 0 0 ENSG00000235874.1 ENST00000445730.1 chr10:112188598-112255954 4 493 66857 intergenic 7.74 0 1,1,1 1 0,0,0 0 6.36865249712072 28.16 0 10.934711398956 34.012 0 27.8346620398762 33.609 0 0 chimp,human,macaque,marmoset,orangutan, antisense antisense A549@0.868344,AG04450@0.078556,BJ@0.12079,GM12878@0.0241745,H1HESC@0,HELAS3@0.491397,HEPG2@0.153483,HMEC@0.74972,HSMM@3.11624,HUVEC@0.132997,K562@0.019227,MCF7@0.004137,NHEK@0.489683,NHLF@0.0860215,SKNSHRA@0.046736, 0 0 0 0 ENSG00000225461.1 ENST00000456985.1 chr10:112257757-112258300 2 467 74 exonic 0 0 0,0,1 0 0,0,0 278.209850107066 256.216216216216 0 497.640256959315 702 23.828 512.785867237687 573.864864864865 33.455 0 0 cow,dog,elephant,guinea_pig,human,macaque,marmoset,mouse,opossum,orangutan,pig,platypus,rabbit,rat, antisense antisense A549@0,AG04450@0,BJ@0.0152575,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0.0113875,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000232470.1 ENST00000416249.1 chr10:112629501-112631352 2 399 1450 intergenic 2.78 0 0,1,0 0 0,0,0 0 0 0 0 0 5.83 0 0 6.128 0 0 chimp,cow,dog,human,macaque,marmoset,orangutan,panda,pig,rabbit, antisense antisense A549@0,AG04450@0,BJ@0.0181045,GM12878@0.323022,H1HESC@0,HELAS3@0.0480285,HEPG2@0,HMEC@0,HSMM@0.0273165,HUVEC@0,K562@0,MCF7@0.0100275,NHEK@0.00329233,NHLF@0,SKNSHRA@0.05965, 0 0 0 0 ENSG00000203497.2 ENST00000420367.1 chr10:112629626-112631991 2 776 1587 intronic 4.53 0 0,1,0 1 0,0,0 8.22164948453608 20.166981726528 0 13.360824742268 30.1644612476371 4.8 18.3427835051546 33.3131695022054 4.944 0 0 chimp,cow,human,macaque,marmoset,orangutan, antisense antisense A549@4.93949,AG04450@1.31881,BJ@0.809562,GM12878@3.55985,H1HESC@3.58754,HELAS3@8.43759,HEPG2@5.41837,HMEC@1.66311,HSMM@3.58652,HUVEC@2.38401,K562@1.13305,MCF7@3.21455,NHEK@1.05883,NHLF@1.87296,SKNSHRA@7.67511, 0 0 0 0 ENSG00000227851.1 ENST00000421597.1 chr10:113109697-113111861 2 425 1737 intergenic -4.25 0 0,0,0 0 0,0,0 0 0 0 0 0 7.039 0 0 9.751 0 0 chimp,horse,human,macaque,marmoset,orangutan,pig, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000232934.1 ENST00000449782.1 chr10:114166052-114169252 4 502 2692 intronic -3.35 0 0,0,0 0 0,0,0 0 12.8354383358098 53.265 4.7609561752988 15.2284546805349 69.85 3.69521912350598 23.1853640416048 89.539 0 0 chimp,cow,dog,guinea_pig,horse,human,macaque,marmoset,orangutan,pig,rabbit, antisense antisense A549@0,AG04450@0,BJ@0,GM12878@0.090147,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000233346.1 ENST00000424422.1 chr10:114172053-114179765 3 548 7160 intronic 7.42 1 0,1,0 0 0,0,0 42.6861313868613 3.47192737430168 0 0 15.9659217877095 0 0 21.4627094972067 0 0 0 chimp,dog,elephant,guinea_pig,human,macaque,marmoset,orangutan, antisense antisense A549@0.0089525,AG04450@0.0107455,BJ@0.032656,GM12878@0.041824,H1HESC@0,HELAS3@0.059113,HEPG2@0.0039485,HMEC@0,HSMM@0.0078715,HUVEC@0.043618,K562@0.013287,MCF7@0.003649,NHEK@0,NHLF@0,SKNSHRA@0.004125, 0 0 0 0 ENSG00000233340.1 ENST00000443652.1 chr10:114431571-114437578 3 355 5648 intronic -2.54 0 0,1,0 0 0,0,0 0 4.81373937677054 389.445 0 11.697769121813 281.06 0 14.4959277620397 303.033 0 0 chimp,human,macaque,marmoset,orangutan, antisense antisense A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000234221.1 ENST00000420207.1 chr10:114447364-114511234 2 481 63387 intronic -6.71 0 0,0,1 0 0,0,0 0 73.8319213718901 0 22.6652806652807 72.0932998879896 17.13 28.8295218295218 72.3594427879534 27.64 0 0 cat,chimp,cow,elephant,horse,human,macaque,marmoset,orangutan,panda,pig,rabbit, processed_transcript processed_transcript A549@0.032576,AG04450@0.0195855,BJ@0.027051,GM12878@0.0076255,H1HESC@0.0197045,HELAS3@0.045849,HEPG2@0.022821,HMEC@0,HSMM@0,HUVEC@0.0208185,K562@0.0166815,MCF7@0,NHEK@0.020543,NHLF@0,SKNSHRA@0.031549, 0 0 0 0 ENSG00000225292.1 ENST00000428766.1 chr10:114648492-114665870 3 314 17060 intronic -5.71 0 0,0,0 0 0,0,0 0 3.52098475967175 13.86 0 8.31049237983587 10.179 17.0955414012739 10.0953692848769 23.168 0 0 cat,chimp,horse,human,macaque,marmoset,orangutan, sense_intronic sense_intronic A549@0.026136,AG04450@0,BJ@0.0200605,GM12878@0.021099,H1HESC@0.0429255,HELAS3@0.018989,HEPG2@0.0803585,HMEC@0,HSMM@0,HUVEC@0.0314295,K562@0.0347025,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0.101067, 0 0 0 0 ENSG00000233547.1 ENST00000369391.3 chr10:114710405-114711634 2 458 769 exonic 0 0 0,0,1 0 0,0,0 331.17903930131 0 143.572 475.788209606987 353.091027308192 129.877 515.364628820961 304.907672301691 124.597 0 0 chimp,horse,human,macaque,marmoset,mouse,opossum,panda,pig,platypus,rabbit,rat, antisense antisense A549@0.351681,AG04450@0.120522,BJ@0.245598,GM12878@0.0050955,H1HESC@0.566123,HELAS3@0.40077,HEPG2@0.387597,HMEC@0.053408,HSMM@0.06407,HUVEC@0.202526,K562@0.144833,MCF7@0.26673,NHEK@0.151968,NHLF@0.0675845,SKNSHRA@0.237821, 0 0 0 0 ENSG00000237996.1 ENST00000420773.1 chr10:114843553-114846535 2 1950 1030 intronic -0.65 0 0,0,1 0 0,0,0 0 0 12.512 0 0 0 0 0 31.655 0 0 chimp,human,macaque,marmoset,orangutan,panda, sense_intronic sense_intronic A549@0.423434,AG04450@0.1827,BJ@0.32294,GM12878@0.013429,H1HESC@2.09723,HELAS3@0.717538,HEPG2@1.03625,HMEC@0.004117,HSMM@0.0819585,HUVEC@0.88212,K562@0.041713,MCF7@0.445414,NHEK@0.148,NHLF@0.0229545,SKNSHRA@0.223589, 0 0 0 0 ENSG00000234393.1 ENST00000448834.1 chr10:115470440-115479091 3 689 7958 intronic 1.56 1 0,1,0 0 0,0,0 0 10.3939432018095 0 0 2.52978135209852 1.61 0 4.5939934656949 1.645 0 0 chimp,cow,dog,horse,human,macaque,orangutan,pig, antisense antisense A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000228484.1 ENST00000436932.1 chr10:116524547-116539662 3 2375 12736 intergenic 4.40 0 0,0,0 0 0,0,0 4.90947368421053 23.5266959798995 4.18 8.10821052631579 18.5399654522613 7.192 8.38147368421053 17.7232255025126 8.786 0 0 chimp,human,macaque,marmoset,orangutan, lincRNA lincRNA A549@0.005974,AG04450@0.0101165,BJ@0.0132825,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0.003444,HSMM@0,HUVEC@0.009554,K562@0,MCF7@0.002594,NHEK@0.002184,NHLF@0.0048865,SKNSHRA@0.0181495, 0 0 0 0 ENSG00000236799.1 ENST00000433085.1 chr10:116754416-116756352 3 341 1591 intergenic 2.58 0 0,1,1 0 0,0,0 0 153.152105593966 0 0 187.043997485858 9.119 0 176.834066624764 17.124 0 0 chimp,human,macaque,marmoset,orangutan, lincRNA lincRNA A549@0.0251375,AG04450@0.018747,BJ@0.0208015,GM12878@0.05374,H1HESC@0.110511,HELAS3@0.05879,HEPG2@0.159508,HMEC@0.011903,HSMM@0.190426,HUVEC@0.0382425,K562@0.0314125,MCF7@0.0671765,NHEK@0.064308,NHLF@0.005609,SKNSHRA@0.114937, 0 0 0 0 ENSG00000232767.1 ENST00000433600.1 chr10:118429614-118432250 3 775 1857 exonic 0.20 1 0,0,1 0 0,0,0 20.2322580645161 61.8325255788907 0 38.3470967741935 87.6488960689284 4.082 70.1122580645161 98.5907377490576 4.121 0 0 cat,chimp,dog,human,macaque,marmoset,orangutan,panda, antisense antisense A549@0.0229195,AG04450@0.0175775,BJ@0,GM12878@0,H1HESC@0.724979,HELAS3@0,HEPG2@0.044165,HMEC@0.026315,HSMM@0,HUVEC@0,K562@0,MCF7@0.127387,NHEK@0.010062,NHLF@0,SKNSHRA@0.0058325, 0 0 0 0 ENSG00000225302.1 ENST00000453491.1 chr10:118592512-118609212 4 653 16041 exonic 3.67 1 1,1,1 1 0,0,0 182.728943338438 75.8441493672464 18.705 203.071975497703 58.6376161087214 42.459 189.43797856049 58.1203790287388 36.915 0 0 cat,chimp,dog,elephant,guinea_pig,horse,human,macaque,marmoset,orangutan,panda,pig, antisense antisense A549@0.931453,AG04450@0.113043,BJ@0.306061,GM12878@3.03262,H1HESC@0.690268,HELAS3@0,HEPG2@0.0357405,HMEC@1.7777,HSMM@0.076761,HUVEC@0.040324,K562@0,MCF7@0.510578,NHEK@0.712529,NHLF@0.041281,SKNSHRA@0.266725, 0 0 0 0 ENSG00000225302.1 ENST00000434227.1 chr10:118594489-118609716 2 158 15067 intronic 5.97 0 0,1,1 0 0,0,0 119.746835443038 62.2655472224066 0 141.189873417722 48.5429747129488 1.984 103.981012658228 47.8309550673658 2.072 0 0 chimp,human,macaque,marmoset,orangutan, antisense antisense A549@0.931453,AG04450@0.113043,BJ@0.306061,GM12878@3.03262,H1HESC@0.690268,HELAS3@0,HEPG2@0.0357405,HMEC@1.7777,HSMM@0.076761,HUVEC@0.040324,K562@0,MCF7@0.510578,NHEK@0.712529,NHLF@0.041281,SKNSHRA@0.266725, 0 0 0 0 ENSG00000234474.1 ENST00000419373.1 chr10:118918167-118928566 2 2379 8018 intergenic 1.31 1 0,1,1 0 0,0,0 122.695670449769 47.015589922674 0 90.4388398486759 41.2481915689698 0 93.2732240437159 43.0778248939885 0 0 0 chimp,cow,guinea_pig,human,macaque,marmoset,orangutan,panda,pig, lincRNA processed_transcript A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000225936.1 ENST00000425264.1 chr10:118999111-119001434 3 741 1578 exonic 8.40 0 0,1,0 0 0,0,0 73.5587044534413 9.17110266159696 0 83.5411605937922 17.6970849176172 15.588 78.4210526315789 19.8263624841572 15.227 0 0 chimp,cow,dog,elephant,guinea_pig,horse,human,macaque,marmoset,mouse,orangutan,rabbit,rat, antisense antisense A549@0,AG04450@0,BJ@0,GM12878@0.005419,H1HESC@0.191194,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0.038532,MCF7@0,NHEK@0.00962767,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000229847.1 ENST00000412075.1 chr10:119232726-119236135 2 474 2933 intergenic 0.19 1 0,0,0 0 0,0,0 0 0 71.888 5.23206751054852 0 50.241 5.12658227848101 0 52.791 0 0 chimp,human,macaque,marmoset,orangutan, antisense antisense A549@0.045311,AG04450@0,BJ@0.479366,GM12878@0.034763,H1HESC@0.0131275,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0.0060465,HUVEC@0,K562@0,MCF7@0,NHEK@0.521061,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000229847.1 ENST00000424371.1 chr10:119232726-119245709 2 452 12529 intergenic 2.89 1 0,0,0 0 0,0,0 0 5.73772846994972 0 0 4.75744273285977 4.86 0 6.26682097533722 19.658 0 0 human,macaque,marmoset, antisense antisense A549@0.045311,AG04450@0,BJ@0.479366,GM12878@0.034763,H1HESC@0.0131275,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0.0060465,HUVEC@0,K562@0,MCF7@0,NHEK@0.521061,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000229847.1 ENST00000450314.1 chr10:119232726-119301830 3 517 68583 intergenic 5.07 1 0,1,0 1 0,0,0 79.0135396518375 31.3331583628596 515.369 57.2688588007737 28.9687240278203 606.377 84.7292069632495 31.4056836242217 563.854 0 0 cow,human,macaque,marmoset,mouse,rabbit,rat, antisense antisense A549@0.045311,AG04450@0,BJ@0.479366,GM12878@0.034763,H1HESC@0.0131275,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0.0060465,HUVEC@0,K562@0,MCF7@0,NHEK@0.521061,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000229847.1 ENST00000440007.1 chr10:119249996-119301845 3 751 51094 intergenic 1.36 0 0,1,0 1 0,0,0 62.982689747004 40.6512310643128 518.474 47.9533954727031 37.4906251223236 610.802 74.0399467376831 39.938035777195 571.675 0 0 elephant,guinea_pig,horse,human,macaque,marmoset,orangutan,panda,pig,rabbit, antisense antisense A549@0.045311,AG04450@0,BJ@0.479366,GM12878@0.034763,H1HESC@0.0131275,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0.0060465,HUVEC@0,K562@0,MCF7@0,NHEK@0.521061,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000229847.1 ENST00000423419.1 chr10:119250160-119254199 3 469 3566 intergenic 1.36 1 0,0,1 0 0,0,0 0 2.15928210880538 0 0 3.17134043746495 0 16.8059701492537 5.67947279865395 0 0 0 cat,chimp,cow,horse,human,macaque,marmoset,orangutan,panda,rabbit, antisense antisense A549@0.045311,AG04450@0,BJ@0.479366,GM12878@0.034763,H1HESC@0.0131275,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0.0060465,HUVEC@0,K562@0,MCF7@0,NHEK@0.521061,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000235198.1 ENST00000450247.1 chr10:119321595-119331968 3 472 9897 intergenic 2.05 1 0,0,0 0 0,0,0 141.762711864407 7.43467717490149 0 153.201271186441 6.92906941497423 0 173.972457627119 8.87733656663635 0 0 0 chimp,cow,dog,guinea_pig,horse,human,macaque,marmoset,panda, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000234952.1 ENST00000445647.1 chr10:119494824-119495918 2 242 850 intergenic 0 0 0,0,0 0 0,0,0 0 0 282.75 0 2.33411764705882 109.428 0 2.36235294117647 151.449 0 0 chimp,cow,human,macaque,marmoset,orangutan, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0.209396,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000231104.1 ENST00000451610.1 chr10:119776998-119804868 3 439 27427 exonic 4.40 1 0,0,0 0 0,0,0 248.683371298405 50.4524738396471 44.416 166.537585421412 55.0730666861122 0 158.46013667426 55.5659022131476 0 0 0 chimp,dog,guinea_pig,human,macaque,marmoset,mouse,orangutan,panda,pig,rabbit, antisense antisense A549@0,AG04450@0,BJ@0.00557,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000231104.1 ENST00000417968.1 chr10:119799664-119804844 3 370 4806 exonic 4.40 1 0,1,0 0 0,0,0 286.67027027027 86.3990844777362 302.109 230.310810810811 111.506034124012 239.132 215.727027027027 109.567207657095 279.839 0 0 cat,chimp,cow,dog,guinea_pig,horse,human,macaque,mouse,orangutan,panda,pig,rabbit,rat, antisense antisense A549@0,AG04450@0,BJ@0.00557,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000177640.11 ENST00000414722.1 chr10:119805790-119966171 4 675 159700 exonic 1.21 0 0,0,0 0 0,0,0 35.8711111111111 29.6711772072636 267.269 26.6548148148148 34.5313212273012 256.083 30.2459259259259 37.2463869755792 256.824 0 0 chimp,cow,dog,elephant,guinea_pig,horse,human,macaque,marmoset,orangutan,pig,rabbit,rat, lincRNA non_coding A549@0.714382,AG04450@0.205043,BJ@0.317799,GM12878@0.0743795,H1HESC@0.218034,HELAS3@0.627919,HEPG2@0.128144,HMEC@0.235842,HSMM@0.119103,HUVEC@0.0799835,K562@0.258551,MCF7@0.49689,NHEK@0.12589,NHLF@0.147692,SKNSHRA@1.0784, 0 0 0 0 ENSG00000177640.11 ENST00000435944.1 chr10:119806335-119969663 5 3263 160057 intergenic 10.32 1 0,1,0 0 0,0,0 118.427214220043 30.9973571915005 253.737 145.903463070794 35.6147934798228 260.101 154.561752988048 38.4553315381396 253.912 0 0 chimp,dog,elephant,guinea_pig,horse,human,macaque,marmoset,orangutan,panda,pig,rabbit,rat, lincRNA non_coding A549@0.714382,AG04450@0.205043,BJ@0.317799,GM12878@0.0743795,H1HESC@0.218034,HELAS3@0.627919,HEPG2@0.128144,HMEC@0.235842,HSMM@0.119103,HUVEC@0.0799835,K562@0.258551,MCF7@0.49689,NHEK@0.12589,NHLF@0.147692,SKNSHRA@1.0784, 0 0 0 0 ENSG00000177640.11 ENST00000426021.1 chr10:119806505-119815736 4 3228 5997 intergenic 1.78 0 0,1,0 1 0,0,0 8.79770755885998 41.0088377522094 182.987 7.61307311028501 30.9264632316158 191.834 12.2744733581165 35.0820410205103 193.327 0 0 chimp,human,macaque,marmoset,orangutan, lincRNA non_coding A549@0.714382,AG04450@0.205043,BJ@0.317799,GM12878@0.0743795,H1HESC@0.218034,HELAS3@0.627919,HEPG2@0.128144,HMEC@0.235842,HSMM@0.119103,HUVEC@0.0799835,K562@0.258551,MCF7@0.49689,NHEK@0.12589,NHLF@0.147692,SKNSHRA@1.0784, 0 0 0 0 ENSG00000177640.11 ENST00000454781.1 chr10:119806515-119859650 4 2212 50917 intergenic -1.37 1 0,1,0 1 0,0,0 17.1912296564195 31.56519433588 177.998 44.880650994575 37.1272266630006 186.573 49.0863471971067 39.5486772590687 188.786 0 0 cat,chimp,cow,human,orangutan,pig, lincRNA non_coding A549@0.714382,AG04450@0.205043,BJ@0.317799,GM12878@0.0743795,H1HESC@0.218034,HELAS3@0.627919,HEPG2@0.128144,HMEC@0.235842,HSMM@0.119103,HUVEC@0.0799835,K562@0.258551,MCF7@0.49689,NHEK@0.12589,NHLF@0.147692,SKNSHRA@1.0784, 0 0 0 0 ENSG00000177640.11 ENST00000454857.1 chr10:119806535-119966501 4 716 159244 intergenic -0.66 0 0,1,0 1 0,0,0 173.296089385475 29.551166762955 166.298 136.643854748603 34.3085767752631 173.573 171.655027932961 37.0376968676999 175.992 0 0 cat,chimp,cow,dog,elephant,guinea_pig,horse,human,macaque,marmoset,mouse,opossum,orangutan,panda,pig,rabbit,rat, lincRNA non_coding A549@0.714382,AG04450@0.205043,BJ@0.317799,GM12878@0.0743795,H1HESC@0.218034,HELAS3@0.627919,HEPG2@0.128144,HMEC@0.235842,HSMM@0.119103,HUVEC@0.0799835,K562@0.258551,MCF7@0.49689,NHEK@0.12589,NHLF@0.147692,SKNSHRA@1.0784, 0 0 0 0 ENSG00000177640.11 ENST00000439517.1 chr10:119809125-119967332 3 452 157751 intergenic -0.38 1 0,0,1 0 0,0,0 5.93362831858407 30.0248746442178 0 42.646017699115 35.3353893160741 9.019 42.641592920354 38.1744394647261 18.11 0 0 cat,chimp,cow,dog,elephant,guinea_pig,horse,human,macaque,marmoset,mouse,orangutan,panda,pig,rabbit,rat, lincRNA non_coding A549@0.714382,AG04450@0.205043,BJ@0.317799,GM12878@0.0743795,H1HESC@0.218034,HELAS3@0.627919,HEPG2@0.128144,HMEC@0.235842,HSMM@0.119103,HUVEC@0.0799835,K562@0.258551,MCF7@0.49689,NHEK@0.12589,NHLF@0.147692,SKNSHRA@1.0784, 0 0 0 0 ENSG00000238276.1 ENST00000413810.1 chr10:120001076-120001586 2 409 99 intergenic -1.37 0 0,1,0 0 0,0,0 0 0 0 0 40.7575757575758 12.576 0 35.6464646464647 15.725 0 0 cat,chimp,cow,dog,elephant,guinea_pig,horse,human,macaque,marmoset,orangutan,panda,pig,rat, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0.005616, 0 0 0 0 ENSG00000238276.1 ENST00000431695.1 chr10:120001155-120007385 5 489 5733 intergenic -1.72 0 0,0,1 0 0,0,0 0 25.004884004884 0 0 38.7319030176173 12.576 0 47.7969649398221 15.725 0 0 chimp,cow,elephant,human,macaque,marmoset,orangutan, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0.005616, 0 0 0 0 ENSG00000238276.1 ENST00000436975.1 chr10:120001157-120007385 4 400 5822 intergenic -1.86 0 0,0,1 0 0,0,0 0 24.6226382686362 0 0 38.1398144967365 12.576 0 47.0663002404672 15.725 0 0 cat,chimp,cow,human,macaque,marmoset, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0.005616, 0 0 0 0 ENSG00000238276.1 ENST00000436430.1 chr10:120001164-120027222 4 552 25500 intergenic -2.47 0 0,0,1 0 0,0,0 0 79.0249803921569 0 0 71.5865490196079 12.576 0 75.797568627451 15.725 0 0 chimp,human,macaque,marmoset,orangutan,panda, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0.005616, 0 0 0 0 ENSG00000232139.1 ENST00000445161.1 chr10:120116620-120118715 3 577 1514 intergenic 4.50 1 0,0,1 0 0,0,0 235.897746967071 575.988110964333 78.165 165.402079722704 683.988110964333 58.649 178.679376083189 676.221928665786 65.654 0 0 chimp,cow,dog,elephant,guinea_pig,horse,human,macaque,marmoset,mouse,opossum,orangutan,panda,pig,rabbit,rat, lincRNA lincRNA A549@0,AG04450@0.007406,BJ@0.013651,GM12878@0,H1HESC@0.0035765,HELAS3@0.033276,HEPG2@0,HMEC@0.008443,HSMM@0.0046765,HUVEC@0,K562@0.012001,MCF7@0.037778,NHEK@0.028213,NHLF@0.008046,SKNSHRA@0.007147, 0 0 0 0 ENSG00000232139.1 ENST00000411666.1 chr10:120117057-120118715 3 315 1339 intergenic 0 1 0,0,1 0 0,0,0 185.536507936508 708.697535474234 10.125 224.228571428571 791.906646751307 10.725 244.498412698413 784.078416728902 11.15 0 0 cat,chimp,cow,dog,elephant,guinea_pig,horse,human,macaque,marmoset,mouse,orangutan,panda,pig,rabbit,rat, lincRNA lincRNA A549@0,AG04450@0.007406,BJ@0.013651,GM12878@0,H1HESC@0.0035765,HELAS3@0.033276,HEPG2@0,HMEC@0.008443,HSMM@0.0046765,HUVEC@0,K562@0.012001,MCF7@0.037778,NHEK@0.028213,NHLF@0.008046,SKNSHRA@0.007147, 0 0 0 0 ENSG00000232139.1 ENST00000415417.1 chr10:120117071-120124615 3 485 7055 intergenic -5.18 0 0,0,1 0 0,0,0 120.503092783505 160.928703047484 4.455 148.940206185567 187.990928419561 4.719 156.445360824742 183.401133947555 4.906 0 0 cat,chimp,cow,dog,guinea_pig,horse,human,macaque,marmoset,orangutan,panda,pig, lincRNA lincRNA A549@0,AG04450@0.007406,BJ@0.013651,GM12878@0,H1HESC@0.0035765,HELAS3@0.033276,HEPG2@0,HMEC@0.008443,HSMM@0.0046765,HUVEC@0,K562@0.012001,MCF7@0.037778,NHEK@0.028213,NHLF@0.008046,SKNSHRA@0.007147, 0 0 0 0 ENSG00000232139.1 ENST00000453236.1 chr10:120117267-120124615 2 483 6863 intergenic -5.18 0 0,1,1 0 0,0,0 148.068322981366 154.225848754189 63.827 155.892339544513 189.635873524698 21.745 162.062111801242 184.731749963573 23.681 0 0 cat,chimp,cow,dog,guinea_pig,horse,human,macaque,marmoset,opossum,orangutan,panda,pig, lincRNA lincRNA A549@0,AG04450@0.007406,BJ@0.013651,GM12878@0,H1HESC@0.0035765,HELAS3@0.033276,HEPG2@0,HMEC@0.008443,HSMM@0.0046765,HUVEC@0,K562@0.012001,MCF7@0.037778,NHEK@0.028213,NHLF@0.008046,SKNSHRA@0.007147, 0 0 0 0 ENSG00000229272.1 ENST00000437838.1 chr10:120763048-120763396 2 227 119 intergenic 5.00 0 0,0,1 0 0,0,0 0 0 0 12.0176211453744 0 2.629 12.1629955947137 0 2.673 0 0 cat,chimp,cow,dog,horse,human,macaque,marmoset,orangutan,pig, antisense antisense A549@0.0094785,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000230139.1 ENST00000450645.1 chr10:120789351-120790661 2 617 691 exonic 22.51 0 0,1,1 0 0,0,0 246.586709886548 100.176555716353 197.728 246.393841166937 356.351664254703 100.897 193.489465153971 350.04486251809 96.346 0 0 cat,chimp,cow,dog,elephant,guinea_pig,horse,human,macaque,marmoset,mouse,orangutan,panda,pig,rabbit,rat, antisense antisense A549@0.143163,AG04450@0.035611,BJ@0.016236,GM12878@0.216745,H1HESC@0.0944215,HELAS3@0.121524,HEPG2@0.158146,HMEC@0,HSMM@0,HUVEC@0.0713435,K562@0.138987,MCF7@0.019635,NHEK@0.043186,NHLF@0,SKNSHRA@0.167397, 0 0 0 0 ENSG00000236426.1 ENST00000457948.1 chr10:121094144-121095542 2 469 927 intronic 0.87 0 0,0,0 0 0,0,0 187.396588486141 0 53.28 191.223880597015 0 56.138 199.02132196162 0 55.221 0 0 cat,chimp,cow,dog,elephant,guinea_pig,horse,human,macaque,marmoset,mouse,opossum,orangutan,panda,pig,rabbit,rat, antisense antisense A549@0,AG04450@0.0100005,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000233177.1 ENST00000448423.1 chr10:121331316-121334113 2 1526 1269 intergenic 2.25 1 0,1,0 0 0,0,0 159.942988204456 43.6312056737589 29.51 228.53997378768 36.5610717100079 17.444 244.832896461337 36.3853427895981 17.136 0 0 cat,chimp,cow,dog,elephant,guinea_pig,horse,human,macaque,marmoset,mouse,opossum,orangutan,panda,pig,rabbit,rat, antisense antisense A549@0.0173025,AG04450@0.0278585,BJ@0,GM12878@0.003068,H1HESC@0,HELAS3@0.003059,HEPG2@0.002848,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0.0074295, 0 0 0 0 ENSG00000224489.1 ENST00000436838.1 chr10:121430230-121484200 3 488 53478 exonic -3.79 0 1,1,1 0 0,0,0 149.84631147541 16.0133512846404 0 121.217213114754 13.3779872096937 0 135.090163934426 21.0453083510976 0 0 0 cat,chimp,guinea_pig,horse,human,macaque,marmoset,mouse,opossum,orangutan,pig,rabbit,rat, processed_transcript processed_transcript A549@0.0111415,AG04450@0,BJ@0.005438,GM12878@0,H1HESC@0,HELAS3@0.0154125,HEPG2@0.0328085,HMEC@0.027052,HSMM@0,HUVEC@0,K562@0.0118375,MCF7@0,NHEK@0.0415343,NHLF@0,SKNSHRA@0.0050985, 0 0 0 0 ENSG00000224489.1 ENST00000433708.1 chr10:121430236-121431581 2 443 900 intronic -3.79 1 0,0,1 0 0,0,0 0 0 130.572 0 0 140.631 0 0 122.776 0 0 chimp,dog,horse,human,macaque,marmoset,orangutan, processed_transcript processed_transcript A549@0.0111415,AG04450@0,BJ@0.005438,GM12878@0,H1HESC@0,HELAS3@0.0154125,HEPG2@0.0328085,HMEC@0.027052,HSMM@0,HUVEC@0,K562@0.0118375,MCF7@0,NHEK@0.0415343,NHLF@0,SKNSHRA@0.0050985, 0 0 0 0 ENSG00000229304.1 ENST00000444568.1 chr10:121672907-121673914 2 542 463 intronic -5.02 0 0,0,0 0 0,0,0 0 0 0 0 0 0 0 0 0 0 0 chimp,human,orangutan, sense_intronic sense_intronic A549@0.045552,AG04450@0.0404135,BJ@0.134166,GM12878@0.0725095,H1HESC@0.10148,HELAS3@0.144527,HEPG2@0.033501,HMEC@0,HSMM@0,HUVEC@0.0703205,K562@0.0612535,MCF7@0,NHEK@0.0376447,NHLF@0.0062215,SKNSHRA@0.118493, 0 0 0 0 ENSG00000228270.1 ENST00000411599.1 chr10:121940742-121968507 4 475 27284 intergenic 2.03 0 0,0,1 0 0,0,0 0 3.59566046034306 0 0 3.1709793285442 4.692 0 3.58964961149392 4.913 0 0 human,macaque,marmoset,orangutan, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@17.0078,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0.004759,HUVEC@0.005076,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000227165.1 ENST00000456120.1 chr10:122521324-122536396 2 2012 13058 intergenic -1.08 0 0,0,0 0 0,0,0 0 5.38313677439118 0 2.60636182902585 6.65775769643131 0 2.68190854870775 6.60820952672691 0 0 0 chimp,human,macaque,orangutan, lincRNA processed_transcript A549@0,AG04450@0.007128,BJ@0,GM12878@0.021612,H1HESC@0.008655,HELAS3@0.0020725,HEPG2@0.0032185,HMEC@0,HSMM@0.0045075,HUVEC@0.0063065,K562@0.0013535,MCF7@0,NHEK@0.00271533,NHLF@0.000969,SKNSHRA@0.020525, 0 0 0 0 ENSG00000227165.1 ENST00000451706.1 chr10:122522913-122551437 4 903 27615 intergenic -0.21 0 0,0,0 0 0,0,0 0 2.54546442151005 0 0 4.22328444685859 0 0 4.76110809342749 50.258 0 0 chimp,cow,elephant,human,macaque,marmoset,orangutan, lincRNA processed_transcript A549@0,AG04450@0.007128,BJ@0,GM12878@0.021612,H1HESC@0.008655,HELAS3@0.0020725,HEPG2@0.0032185,HMEC@0,HSMM@0.0045075,HUVEC@0.0063065,K562@0.0013535,MCF7@0,NHEK@0.00271533,NHLF@0.000969,SKNSHRA@0.020525, 0 0 0 0 ENSG00000227307.1 ENST00000414774.1 chr10:122685059-122740213 2 941 54211 intergenic 0 0 0,1,0 0 0,0,0 0 22.5565660105883 0 13.4155154091392 16.713969489587 0 13.874601487779 16.4455922229806 0 0 0 chimp,cow,guinea_pig,horse,human,panda, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0.096947,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000227143.1 ENST00000429809.1 chr10:122938214-122945480 2 2862 4402 intergenic 6.31 1 0,1,1 0 0,0,0 12.1911250873515 18.6151749204907 0 22.2844164919637 13.719445706497 0 28.6114605171209 16.8262153566561 5.035 0 0 chimp,guinea_pig,human,macaque,marmoset,orangutan,panda, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0.002042,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0.0159605,HUVEC@0,K562@0,MCF7@0,NHEK@0.00136033,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000223432.1 ENST00000434988.1 chr10:123374939-123375353 2 308 104 intergenic 0 0 0,1,0 0 0,0,0 115.493506493506 0 0 31.8311688311688 0 42.669 61.9090909090909 0 48.064 0 0 cat,chimp,cow,dog,elephant,guinea_pig,horse,human,macaque,marmoset,orangutan,panda,pig, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0.013265,NHEK@0.03407,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000224250.1 ENST00000447943.1 chr10:123495818-123499245 3 296 3127 intergenic -0.60 1 0,0,0 0 0,0,0 0 19.4953629677007 0 0 20.2673488967061 9.114 0 26.1851614966421 18.971 0 0 cat,chimp,guinea_pig,human,macaque,marmoset,orangutan,panda, antisense antisense A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000226864.1 ENST00000437593.1 chr10:123687827-123711480 2 949 22702 exonic 7.54 1 0,1,0 1 0,0,0 29.7892518440464 9.74138842392741 69.552 69.5711275026343 7.45361642146066 90.884 71.9947312961012 9.36463747687428 85.067 0 0 cow,elephant,guinea_pig,horse,human,macaque,marmoset,mouse,orangutan,panda,rat, antisense antisense A549@0.0363715,AG04450@0.279077,BJ@0.561674,GM12878@0.043553,H1HESC@0.077051,HELAS3@0.141535,HEPG2@0.274378,HMEC@0.021528,HSMM@0.199734,HUVEC@0.185198,K562@0.0323055,MCF7@0.312126,NHEK@0.0479937,NHLF@0.462786,SKNSHRA@0.892281, 0 0 0 0 ENSG00000230131.1 ENST00000448347.1 chr10:125115966-125277224 5 826 160424 intergenic 0.34 0 0,0,0 0 0,0,0 37.4237288135593 43.8269585598165 62.46 16.6307506053269 41.4609410063332 11.81 15.3728813559322 46.7823580012966 19.482 0 0 chimp,cow,dog,horse,human,macaque,marmoset,mouse,orangutan,pig, lincRNA lincRNA A549@0.0121755,AG04450@0,BJ@0,GM12878@0.09621,H1HESC@0.196292,HELAS3@0.005023,HEPG2@0.0550865,HMEC@0,HSMM@0,HUVEC@0.007132,K562@0,MCF7@0,NHEK@0.00158867,NHLF@0,SKNSHRA@0.0722715, 0 0 0 0 ENSG00000225152.1 ENST00000415509.1 chr10:125185229-125187156 2 414 1511 intergenic 1.62 0 0,0,0 0 0,0,0 43.9613526570048 37.554599602912 407.911 13.3719806763285 31.5307743216413 387.034 12.8695652173913 38.656518861681 457.06 0 0 chimp,horse,human,macaque,marmoset,orangutan, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000230131.1 ENST00000448671.1 chr10:125208869-125248852 2 572 39409 intergenic 0 0 0,0,1 0 0,0,0 0 44.078027861656 0 0 45.8000202999315 0 0 52.0968052982821 0 0 0 chimp,human,macaque,orangutan, lincRNA lincRNA A549@0.0121755,AG04450@0,BJ@0,GM12878@0.09621,H1HESC@0.196292,HELAS3@0.005023,HEPG2@0.0550865,HMEC@0,HSMM@0,HUVEC@0.007132,K562@0,MCF7@0,NHEK@0.00158867,NHLF@0,SKNSHRA@0.0722715, 0 0 0 0 ENSG00000234542.1 ENST00000451295.1 chr10:125333743-125343283 3 435 9101 intergenic 0.43 1 0,1,0 0 0,0,0 0 2.14613778705637 0 0 3.51697615646632 0 0 4.84045709262718 0 0 0 chimp,human,macaque,marmoset,orangutan,pig, lincRNA lincRNA A549@0.0154,AG04450@0,BJ@0,GM12878@0.0060625,H1HESC@0.018025,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000231138.1 ENST00000446888.1 chr10:125536186-125537265 2 804 273 intronic -0.94 0 0,1,1 0 0,0,0 0 0 0 0 0 0 0 0 0 0 0 human,macaque,marmoset,orangutan,panda, antisense antisense A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000234677.1 ENST00000435782.1 chr10:125673090-125691113 3 386 17633 intronic -10.37 0 0,0,1 0 0,0,0 0 11.4864742244655 0 67.2331606217617 6.96903533148075 0 67.139896373057 8.17217716781036 0 0 0 chimp,cow,elephant,guinea_pig,human,macaque,marmoset,mouse,orangutan,panda,pig,rat, sense_intronic sense_intronic A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000233334.1 ENST00000448422.1 chr10:126392194-126402489 2 1192 9101 intronic 4.18 0 0,0,0 0 0,0,0 12.0738255033557 16.4356664102846 0 8.16778523489933 15.9969234150093 0 9.68204697986577 15.3860015382925 0 0 0 cat,chimp,dog,elephant,horse,human,macaque,orangutan,pig, antisense antisense A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0.0032685,SKNSHRA@0.0019035, 0 0 0 0 ENSG00000233334.1 ENST00000432699.1 chr10:126392753-126402272 3 555 8960 intronic 4.18 1 0,0,1 0 0,0,0 0 16.6943080357143 0 0 16.2486607142857 0 3.06486486486486 15.628125 0 0 0 cat,chimp,cow,dog,horse,human,macaque,marmoset,orangutan, antisense antisense A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0.0032685,SKNSHRA@0.0019035, 0 0 0 0 ENSG00000237866.1 ENST00000446713.1 chr10:126617452-126619962 2 428 2080 intergenic -2.80 0 0,0,0 0 0,0,0 0 0 0 10.8831775700935 0 0 12.6939252336449 0 0 0 0 chimp,human,macaque,orangutan, antisense antisense A549@0,AG04450@0,BJ@0,GM12878@0.025953,H1HESC@0,HELAS3@0,HEPG2@0.0063435,HMEC@0,HSMM@0,HUVEC@0,K562@0.770288,MCF7@0.0047815,NHEK@0,NHLF@0,SKNSHRA@0.0250205, 0 0 0 0 ENSG00000226899.1 ENST00000449984.1 chr10:126633773-126635001 2 828 398 intronic -5.87 0 0,1,0 0 0,0,0 9.29951690821256 0 0 0 0 0 0 0 3.888 0 0 chimp,human,macaque,marmoset,orangutan, antisense antisense A549@0,AG04450@0.0149035,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0.010103,HMEC@0,HSMM@0,HUVEC@0,K562@0.771662,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0.020102, 0 0 0 0 ENSG00000237675.1 ENST00000446081.1 chr10:127262940-127267014 5 744 3322 intronic 0 1 0,0,0 0 0,0,0 134.037634408602 21.9036724864539 0 11.1155913978495 1.53521974714028 0 13.8763440860215 6.29078868151716 0 0 0 chimp,human,macaque,marmoset,orangutan, antisense antisense A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000237675.1 ENST00000431861.1 chr10:127263014-127266935 3 380 3537 intronic 0 1 0,0,0 0 0,0,0 174.578947368421 20.5722363584959 0 21.7631578947368 1.44189991518236 0 26.4526315789474 5.90839694656488 0 0 0 cat,chimp,cow,dog,guinea_pig,horse,human,macaque,marmoset,mouse,orangutan, antisense antisense A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000228021.1 ENST00000415305.1 chr10:127371812-127398246 5 3144 23282 intergenic 4.28 0 0,0,0 0 0,0,0 51.4818702290076 54.2807318958852 0 19.0817430025445 39.3145777854136 21.675 20.2105597964377 37.553904303754 21.858 0 0 chimp,human,macaque,marmoset,orangutan, antisense antisense A549@0.001675,AG04450@0,BJ@0.00852,GM12878@0,H1HESC@0,HELAS3@0.306562,HEPG2@0.077713,HMEC@0,HSMM@0.000724,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0.00433,SKNSHRA@0.0039275, 0 0 0 0 ENSG00000228021.1 ENST00000449693.1 chr10:127371862-127389178 4 367 16943 intergenic 4.28 0 0,0,0 0 0,0,0 21.2861035422343 52.5415805937555 0 0 35.5824234197013 21.675 0 34.6544885793543 21.858 0 0 chimp,horse,human,macaque,marmoset,orangutan,panda, antisense antisense A549@0.001675,AG04450@0,BJ@0.00852,GM12878@0,H1HESC@0,HELAS3@0.306562,HEPG2@0.077713,HMEC@0,HSMM@0.000724,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0.00433,SKNSHRA@0.0039275, 0 0 0 0 ENSG00000224023.4 ENST00000527483.1 chr10:127389005-127408029 5 759 18257 intergenic -1.64 0 1,1,1 1 0,0,0 193.924901185771 28.5709043106754 14.136 73.9631093544137 19.7214766938708 328.924 80.5823451910408 18.5606616640193 335.314 0 0 cat,chimp,dog,guinea_pig,horse,human,macaque,marmoset,mouse,orangutan,panda,pig,rabbit, antisense antisense A549@0.780798,AG04450@0.311427,BJ@0.641223,GM12878@0.462597,H1HESC@0.185986,HELAS3@0.772621,HEPG2@0.140557,HMEC@0.217231,HSMM@0.474918,HUVEC@0.132732,K562@0.121728,MCF7@0.491274,NHEK@0.564284,NHLF@0.507054,SKNSHRA@0.545283, 0 0 0 0 ENSG00000224023.4 ENST00000419400.1 chr10:127389006-127396118 4 442 6664 intergenic -1.64 0 0,1,1 0 0,0,0 100.676470588235 56.0552220888355 116.871 71.5588235294118 46.8861044417767 30.596 81.685520361991 43.094087635054 29.624 0 0 cat,chimp,cow,dog,guinea_pig,horse,human,macaque,marmoset,orangutan,panda,pig,rat, antisense antisense A549@0.780798,AG04450@0.311427,BJ@0.641223,GM12878@0.462597,H1HESC@0.185986,HELAS3@0.772621,HEPG2@0.140557,HMEC@0.217231,HSMM@0.474918,HUVEC@0.132732,K562@0.121728,MCF7@0.491274,NHEK@0.564284,NHLF@0.507054,SKNSHRA@0.545283, 0 0 0 0 ENSG00000224023.4 ENST00000423178.2 chr10:127393859-127408135 5 2595 11673 intergenic 0.42 0 0,1,0 1 0,0,0 58.9050559629487 12.6802260854672 14.136 26.0463141644153 4.07690331420742 43.607 28.2003087610961 4.42605121178385 44.067 0 0 chimp,horse,human,macaque,orangutan,panda, antisense retained_intron A549@0.780798,AG04450@0.311427,BJ@0.641223,GM12878@0.462597,H1HESC@0.185986,HELAS3@0.772621,HEPG2@0.140557,HMEC@0.217231,HSMM@0.474918,HUVEC@0.132732,K562@0.121728,MCF7@0.491274,NHEK@0.564284,NHLF@0.507054,SKNSHRA@0.545283, 0 0 0 0 ENSG00000224023.4 ENST00000528844.1 chr10:127395806-127408115 3 715 11590 intergenic -4.04 0 1,1,1 1 0,0,0 205.858741258741 12.7754098360656 14.136 79.0293706293706 4.10750647109577 43.607 86.0293706293706 4.45927523727351 44.067 0 0 cat,chimp,dog,guinea_pig,horse,human,macaque,marmoset,orangutan,panda,rabbit, antisense antisense A549@0.780798,AG04450@0.311427,BJ@0.641223,GM12878@0.462597,H1HESC@0.185986,HELAS3@0.772621,HEPG2@0.140557,HMEC@0.217231,HSMM@0.474918,HUVEC@0.132732,K562@0.121728,MCF7@0.491274,NHEK@0.564284,NHLF@0.507054,SKNSHRA@0.545283, 0 0 0 0 ENSG00000224023.4 ENST00000525909.1 chr10:127395871-127408093 2 485 11735 intergenic -8.22 0 1,1,1 1 0,0,0 303.482474226804 12.6175543246698 14.136 106.478350515464 4.27379633574776 45.924 116.830927835052 4.62582019599489 46.314 0 0 cat,chimp,cow,dog,guinea_pig,horse,human,macaque,marmoset,mouse,orangutan,panda,pig,rabbit,rat, antisense antisense A549@0.780798,AG04450@0.311427,BJ@0.641223,GM12878@0.462597,H1HESC@0.185986,HELAS3@0.772621,HEPG2@0.140557,HMEC@0.217231,HSMM@0.474918,HUVEC@0.132732,K562@0.121728,MCF7@0.491274,NHEK@0.564284,NHLF@0.507054,SKNSHRA@0.545283, 0 0 0 0 ENSG00000224023.4 ENST00000531977.1 chr10:127397575-127408017 2 587 9853 intergenic -3.31 0 0,1,0 1 0,0,0 0 13.5883487262763 14.136 0 3.98406576677154 48.471 0 4.54724449406272 48.915 0 1 chimp,human,macaque,orangutan, antisense retained_intron A549@0.780798,AG04450@0.311427,BJ@0.641223,GM12878@0.462597,H1HESC@0.185986,HELAS3@0.772621,HEPG2@0.140557,HMEC@0.217231,HSMM@0.474918,HUVEC@0.132732,K562@0.121728,MCF7@0.491274,NHEK@0.564284,NHLF@0.507054,SKNSHRA@0.545283, 0 0 0 0 ENSG00000234134.1 ENST00000430970.1 chr10:127407340-127407934 2 298 294 intergenic 0 0 0,0,1 1 0,0,0 0 0 14.136 0 0 48.471 0 0 48.915 0 0 chimp,human,macaque,marmoset,orangutan, antisense antisense A549@0.002214,AG04450@0,BJ@0.0479385,GM12878@0.003025,H1HESC@0.0028325,HELAS3@0.0067755,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0.0183545,MCF7@0,NHEK@0.002839,NHLF@0,SKNSHRA@0.0048455, 0 0 0 0 ENSG00000236991.1 ENST00000449436.1 chr10:127433296-127439035 4 501 5232 exonic 2.94 0 0,0,0 0 0,0,0 23.0179640718563 30.7270642201835 0 33.3013972055888 38.2347094801223 5.26 67.4830339321357 45.0017201834862 5.3 0 0 cat,chimp,dog,guinea_pig,human,macaque,marmoset,mouse,orangutan, antisense antisense A549@0,AG04450@0.025541,BJ@0.004875,GM12878@0.0145415,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0.009028,HUVEC@0,K562@0,MCF7@0,NHEK@0.00252767,NHLF@0.003821,SKNSHRA@0, 0 0 0 0 ENSG00000233409.1 ENST00000445458.1 chr10:127660757-127661695 3 425 509 intronic 2.39 0 0,0,0 0 0,0,0 0 0 0 0 0 0 0 0 0 0 0 chimp,human,macaque,marmoset,orangutan, antisense antisense A549@0.014505,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000235180.1 ENST00000456514.1 chr10:128102438-128110448 4 1164 6840 intergenic 2.08 0 0,0,0 0 0,0,0 33.4063573883162 5.44429824561404 0 2.4639175257732 1.29941520467836 22.876 19.2104810996564 3.8140350877193 26.506 0 0 chimp,horse,human,marmoset,orangutan, lincRNA lincRNA A549@0.0253395,AG04450@0.060873,BJ@0.056103,GM12878@0,H1HESC@0,HELAS3@0.83758,HEPG2@0.007006,HMEC@0,HSMM@0.06779,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0.0730585,SKNSHRA@0.0727895, 0 0 0 0 ENSG00000232935.1 ENST00000420941.1 chr10:128811765-128814220 3 402 2049 intronic 1.72 1 0,1,0 0 0,0,0 0 0 0 0 1.24450951683748 0 0 1.32747681795998 0 0 0 elephant,human,macaque,marmoset,orangutan, antisense antisense A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000223528.1 ENST00000432554.1 chr10:128823205-128824687 2 473 1007 exonic 0 1 0,0,0 0 0,0,0 22.4101479915433 0 0 72.1458773784355 0 2.244 98.9344608879493 0 2.754 0 0 cat,chimp,cow,dog,elephant,horse,human,macaque,marmoset,orangutan,panda, antisense antisense A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000232259.1 ENST00000420845.1 chr10:129727640-129732781 2 746 4393 intronic 3.51 0 0,0,0 0 0,0,0 0 16.7393580696563 0 0 8.70908263145914 9.09 0 9.06442066924653 9.406 0 0 cat,chimp,dog,horse,human,macaque,marmoset,orangutan, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0.011919,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0.0365125,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0.0143835, 0 0 0 0 ENSG00000227076.1 ENST00000433110.1 chr10:129732962-129734431 2 369 1098 intronic -2.13 0 0,0,0 0 0,0,0 0 0 0 0 8.27868852459016 0 0 8.56648451730419 0 0 0 chimp,human,macaque,marmoset,orangutan, sense_intronic sense_intronic A549@0,AG04450@0,BJ@0,GM12878@0.0240615,H1HESC@0,HELAS3@0.0100475,HEPG2@0,HMEC@0,HSMM@0.0155865,HUVEC@0.101967,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0.047191, 0 0 0 0 ENSG00000256413.1 ENST00000536791.1 chr10:130084199-130115983 6 3013 28761 intergenic 2.03 0 0,1,0 0 0,0,0 53.4537006306007 38.8845659052189 0 56.4228343843345 41.9729494801989 0 60.0862927314968 44.7220541705782 0 0 1 chimp,human,macaque,orangutan, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0.0152225,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0.000755,HUVEC@0,K562@0.0081925,MCF7@0.001362,NHEK@0,NHLF@0,SKNSHRA@0.158343, 0 0 0 0 ENSG00000234640.1 ENST00000454492.1 chr10:130114546-130118478 2 344 3586 intergenic -1.99 0 0,0,0 0 0,0,0 138.53488372093 5.3446737311768 0 124.273255813953 5.72225320691578 0 125.581395348837 4.49749023982153 0 0 0 chimp,dog,guinea_pig,human,macaque,marmoset,orangutan, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000231308.1 ENST00000443888.1 chr10:130695766-130696233 2 198 267 intergenic 0 0 0,0,1 0 0,0,0 54.3181818181818 0 0 123.853535353535 61.434456928839 17.399 114.954545454545 51.3408239700374 18.199 0 0 cat,chimp,cow,dog,elephant,horse,human,macaque,marmoset,mouse,orangutan,pig,rat, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000224190.1 ENST00000446589.1 chr10:130711143-130714535 5 445 2939 intergenic 5.21 0 0,0,0 0 0,0,0 0 12.4984688669616 119.978 6.44494382022472 14.0629465804695 47.143 7.49662921348315 17.2191221503913 56.852 0 0 chimp,cow,dog,guinea_pig,human,macaque,marmoset,orangutan,panda, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0.00870433,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000232985.1 ENST00000453367.1 chr10:130757036-130758326 3 372 914 intergenic 11.10 0 0,0,0 0 0,0,0 399.465053763441 286.382932166302 404.463 237.021505376344 223.814004376368 263.736 314.422043010753 262.996717724289 320.853 0 0 chimp,dog,horse,human,macaque,marmoset,opossum,orangutan,pig,rat, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000225424.1 ENST00000414581.1 chr10:131076515-131089986 2 473 12996 intergenic 1.20 1 0,0,0 0 0,0,0 0 25.5911049553709 0 0 24.3798091720529 0 0 27.9866112650046 0 0 0 chimp,dog,horse,human,macaque,orangutan, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000237224.1 ENST00000428178.1 chr10:131498980-131499526 3 314 228 intronic 0.67 1 0,0,0 0 0,0,0 0 0 0 0 0 0 0 0 0 0 0 chimp,human,macaque,marmoset,orangutan, antisense antisense A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000227374.1 ENST00000428273.1 chr10:131567108-131567699 2 493 96 intergenic 2.20 0 0,0,1 0 0,0,0 24.2596348884381 0 0 6.71805273833671 0 3.924 7.48884381338742 0 3.9 0 0 cat,chimp,dog,guinea_pig,horse,human,macaque,marmoset,orangutan,panda,rat, lincRNA lincRNA A549@0.0155835,AG04450@0.100766,BJ@0.067039,GM12878@0,H1HESC@0.205712,HELAS3@0.331132,HEPG2@0.360226,HMEC@0,HSMM@0.0405495,HUVEC@0.155702,K562@0,MCF7@0.229001,NHEK@0.0928087,NHLF@0.0078835,SKNSHRA@0.142983, 0 0 0 0 ENSG00000228671.1 ENST00000430326.1 chr10:131581117-131584811 3 2702 988 intergenic 2.89 0 0,0,0 0 0,0,0 13.9096965210955 43.3603238866397 0 9.05884529977794 48.5495951417004 0 9.86528497409326 54.2601214574899 0 0 0 chimp,human,macaque,marmoset,orangutan, lincRNA lincRNA A549@0.0271845,AG04450@0.0466505,BJ@0.0350625,GM12878@0,H1HESC@0.139535,HELAS3@0.20869,HEPG2@0.276575,HMEC@0.001514,HSMM@0.012437,HUVEC@0.0288225,K562@0,MCF7@0.159949,NHEK@0.0844973,NHLF@0.0162225,SKNSHRA@0.164833, 0 0 0 0 ENSG00000234440.1 ENST00000423976.1 chr10:131702617-131703216 2 414 183 intronic 0.60 0 0,0,1 0 0,0,0 0 0 0 0 94.7049180327869 0 1.65700483091787 99.3387978142077 0 0 0 chimp,cow,human,macaque,orangutan,pig, antisense antisense A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000237489.2 ENST00000456581.1 chr10:131864638-131909081 6 2837 41596 intergenic 5.57 0 0,1,0 1 0,0,0 10.2714134649277 23.0292095393788 0 7.13570673246387 12.6169583613809 10.187 26.887909763835 13.107438215213 10.383 0 0 chimp,guinea_pig,human,macaque,marmoset,orangutan, lincRNA processed_transcript A549@0.197883,AG04450@0.103243,BJ@0.243264,GM12878@0.169252,H1HESC@0.25917,HELAS3@0.147856,HEPG2@0.112102,HMEC@0.051849,HSMM@0.169015,HUVEC@0.084739,K562@0.088183,MCF7@0.420339,NHEK@0.183745,NHLF@0.100255,SKNSHRA@0.199128, 0 0 0 0 ENSG00000244919.1 ENST00000502243.1 chr10:131910186-131919006 2 870 7948 intergenic 2.05 0 0,0,0 0 0,0,0 0 0 0 0 0 6.869 0 0 7.047 0 1 human,macaque,orangutan, lincRNA lincRNA A549@0.237212,AG04450@0.116551,BJ@0.193098,GM12878@0.255617,H1HESC@0.288376,HELAS3@0.331062,HEPG2@0.309315,HMEC@0.009391,HSMM@0.0499925,HUVEC@0.046138,K562@0.112306,MCF7@0.128277,NHEK@0.147942,NHLF@0.353795,SKNSHRA@0.788703, 0 0 0 0 ENSG00000203417.2 ENST00000440388.1 chr10:131984445-131985130 2 550 133 intergenic -6.89 0 0,0,0 0 0,0,0 0 0 0 0 0 0 0 0 0 0 0 chimp,human,macaque,marmoset,orangutan, lincRNA lincRNA A549@0.466224,AG04450@0.346059,BJ@0.437389,GM12878@0.410802,H1HESC@0.345383,HELAS3@0.850349,HEPG2@0.804156,HMEC@0.492695,HSMM@0,HUVEC@0.786655,K562@0.351303,MCF7@2.142,NHEK@0.953253,NHLF@0.0034955,SKNSHRA@0.454421, 0 0 0 0 ENSG00000237364.1 ENST00000449936.1 chr10:132001138-132001392 2 222 30 intergenic 0 0 0,0,0 0 0,0,0 0 0 17.608 0 0 2.629 52.7567567567568 0 2.673 0 0 chimp,human,macaque,orangutan, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0.0186345,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000236303.1 ENST00000439421.1 chr10:132237331-132281418 2 295 43790 intergenic -1.55 0 0,0,0 0 0,0,0 0 1.71445535510391 0 0 2.40212377255081 0 0 3.13350079926924 2.115 0 0 chimp,human,macaque,marmoset,orangutan, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000230098.1 ENST00000436942.1 chr10:132893481-132894040 2 470 87 intronic 0.22 1 0,0,1 0 0,0,0 0 0 0 0 0 0 0 0 0 0 0 chimp,horse,human,macaque,marmoset,orangutan, antisense antisense A549@0.0150495,AG04450@0,BJ@0,GM12878@0.004271,H1HESC@0.12259,HELAS3@0.0088435,HEPG2@0.0502275,HMEC@0.0347,HSMM@0,HUVEC@0,K562@0,MCF7@0.108226,NHEK@0.008206,NHLF@0.008176,SKNSHRA@0, 138 2 105 2 ENSG00000223835.1 ENST00000445868.1 chr10:132897968-132903660 5 755 4929 intronic -1.90 0 0,0,0 0 0,0,0 0 8.1034692635423 0 0 12.7616149320349 0 0 13.1383647798742 0 0 0 chimp,human,macaque,marmoset,orangutan, antisense antisense A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000235010.1 ENST00000414106.1 chr10:133994729-133998503 3 478 3292 exonic -10.10 0 0,0,1 0 0,0,0 19.1966527196653 15.9902794653706 0 18.4623430962343 23.8396111786148 8.464 34.6569037656904 31.3869987849332 29.62 0 0 chimp,guinea_pig,horse,human,macaque,marmoset,orangutan, antisense antisense A549@0.040006,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0.187787,HEPG2@0.0973825,HMEC@0.008513,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0.312601, 0 0 0 0 ENSG00000235010.1 ENST00000443922.1 chr10:133997578-133999466 3 475 1409 exonic 0 0 0,1,0 0 0,0,0 19.3178947368421 37.3598296664301 0 28.498947368421 55.4017033356991 0.992 86.6821052631579 67.6557842441448 7.535 0 0 chimp,horse,human,macaque,marmoset,orangutan,panda,pig,platypus, antisense antisense A549@0.040006,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0.187787,HEPG2@0.0973825,HMEC@0.008513,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0.312601, 0 0 0 0 ENSG00000231705.1 ENST00000428814.1 chr10:134232587-134234457 2 295 1573 intergenic -12.27 1 0,0,1 0 0,0,0 0 0 0 0 0 0 29.8508474576271 3.86013986013986 5.522 0 0 chimp,human,marmoset,orangutan, lincRNA lincRNA A549@0.033217,AG04450@0,BJ@0,GM12878@0,H1HESC@0.0281365,HELAS3@0.04148,HEPG2@0.0183685,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0.0412295,NHEK@0.0309753,NHLF@0,SKNSHRA@0.015305, 0 0 0 0 ENSG00000234311.1 ENST00000450206.1 chr10:134247237-134254988 2 1011 6738 intergenic -0.63 0 0,0,1 0 0,0,0 0 0 0 0 0 0 0 117.817601662214 3.319 0 0 chimp,human,macaque,orangutan, antisense antisense A549@0.705795,AG04450@0,BJ@0,GM12878@0,H1HESC@0.107272,HELAS3@0.513004,HEPG2@0.180493,HMEC@0,HSMM@0.0045005,HUVEC@0,K562@0.129513,MCF7@0.0119985,NHEK@0.00252033,NHLF@0,SKNSHRA@0.020177, 0 0 0 0 ENSG00000226900.1 ENST00000455414.1 chr10:134325130-134331695 2 632 5931 intergenic 1.29 1 1,1,1 1 0,0,0 0 2.9742033383915 0 0 4.96020907098297 0 0 5.16877423705952 0 0 0 chimp,human,macaque,marmoset, lincRNA processed_transcript A549@0.024274,AG04450@0.122039,BJ@0.702599,GM12878@0,H1HESC@0.784286,HELAS3@0.382864,HEPG2@6.5949,HMEC@0,HSMM@0.075345,HUVEC@0,K562@0.0264825,MCF7@0.165698,NHEK@0,NHLF@0.186434,SKNSHRA@1.74117, 0 0 0 0 ENSG00000229081.1 ENST00000445190.1 chr10:134334331-134335953 1 1622 0 intergenic 2.91 1 0,0,1 0 0,0,0 0 0 0 0 0 0 0 0 0 0 0 chimp,human,macaque, antisense antisense A549@0.022151,AG04450@0.0571005,BJ@0.547724,GM12878@0,H1HESC@0,HELAS3@0.08894,HEPG2@0.0654555,HMEC@0,HSMM@0.001268,HUVEC@0.024935,K562@0,MCF7@0.478391,NHEK@0.00970033,NHLF@0.13422,SKNSHRA@0.352067, 0 0 0 0 ENSG00000234531.1 ENST00000441365.1 chr10:134596683-134598197 2 401 1111 exonic 0 1 0,1,1 0 0,0,0 78.9825436408978 0 177.862 34.7655860349127 8.38163816381638 402.241 94.0548628428928 9.93519351935194 471.537 0 0 chimp,human,macaque,marmoset,orangutan, antisense antisense A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0.00614,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000232903.1 ENST00000424193.1 chr10:134757471-134778928 2 2617 18838 encompassing 9.32 0 0,0,0 0 0,0,0 0 0 0 0 1.18675018579467 0 9.03782957585021 5.59533920798386 76.21 0 0 human,macaque,marmoset, processed_transcript processed_transcript A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0.010471,HELAS3@0.005206,HEPG2@0.001061,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0.109095,NHEK@0.000987667,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000224758.1 ENST00000423232.1 chr10:134774844-134775741 2 602 293 intergenic -0.04 0 0,0,0 0 0,0,0 0 0 0 0 0 11.024 0 0 17.096 0 0 chimp,human,macaque,orangutan,panda, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0.0822935,HELAS3@0.026364,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0.011069,K562@0,MCF7@0.300994,NHEK@0.0152837,NHLF@0,SKNSHRA@0.003763, 0 0 0 0 ENSG00000240707.1 ENST00000461291.1 chr10:134779038-134789858 3 5252 5564 intergenic 5.20 0 0,0,0 0 0,0,0 4.40727341964966 0 0 1.05102817974105 0 0 11.9141279512567 3.87958303378864 75.539 0 0 chimp,human,orangutan, lincRNA processed_transcript A549@0,AG04450@0,BJ@0.0049265,GM12878@0,H1HESC@0.027393,HELAS3@0,HEPG2@0.001038,HMEC@0,HSMM@0.002848,HUVEC@0.002776,K562@0,MCF7@0.0547735,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000256925.1 ENST00000444433.1 chr10:134898748-134900201 3 472 977 intronic 2.50 0 0,0,1 0 0,0,0 0 0 0 0 0 2.868 0 1.85568065506653 3.159 0 0 chimp,human,macaque,marmoset,orangutan, processed_transcript processed_transcript A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0.0062565,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000166917.5 ENST00000300167.5 chr10:135060392-135061389 2 256 739 intergenic 0 0 0,0,0 0 0,0,0 0 30.8849797023004 0 0 47.1515561569689 0 0 55.8646820027064 0 0 0 human,macaque,orangutan, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000151651.10 ENST00000485491.1 chr10:135075907-135090372 23 3256 11165 intergenic 257.96 1 1,1,1 1 0,1,1 5.43181818181818 0.0428123600537394 0 111.831081081081 3.63143752798925 0 149.770577395577 37.3748320644872 2.761 0 0 chimp,cow,dog,elephant,human,macaque,marmoset,opossum,orangutan,pig,rabbit, lincRNA lincRNA A549@0.278142,AG04450@0.081278,BJ@0.135739,GM12878@3.71779,H1HESC@2.75834,HELAS3@0.377895,HEPG2@0.271497,HMEC@5.41175,HSMM@0.0909685,HUVEC@0.13526,K562@0.780496,MCF7@0.557902,NHEK@13.3278,NHLF@0.076119,SKNSHRA@0.51322, 0 0 0 0 ENSG00000151651.10 ENST00000415217.2 chr10:135075921-135090407 22 3111 11333 intergenic 214.21 1 1,1,1 1 0,1,1 5.6849887495982 0.0421777111091503 0 108.067823850852 4.16156357539928 0 144.678881388621 37.4071296214594 6.777 0 0 cow,dog,elephant,horse,human,macaque,marmoset,opossum,orangutan,panda,pig,rabbit, lincRNA lincRNA A549@0.278142,AG04450@0.081278,BJ@0.135739,GM12878@3.71779,H1HESC@2.75834,HELAS3@0.377895,HEPG2@0.271497,HMEC@5.41175,HSMM@0.0909685,HUVEC@0.13526,K562@0.780496,MCF7@0.557902,NHEK@13.3278,NHLF@0.076119,SKNSHRA@0.51322, 0 0 0 0 ENSG00000151651.10 ENST00000445355.2 chr10:135075921-135090407 20 3007 11441 intergenic 221.41 1 1,1,1 1 0,1,1 5.88160957765214 0.0417795647233633 0 107.396075823079 5.52364303819596 0 142.666444961756 38.7841097806136 6.777 0 0 cow,dog,elephant,horse,human,macaque,marmoset,orangutan,pig,platypus,rabbit, lincRNA lincRNA A549@0.278142,AG04450@0.081278,BJ@0.135739,GM12878@3.71779,H1HESC@2.75834,HELAS3@0.377895,HEPG2@0.271497,HMEC@5.41175,HSMM@0.0909685,HUVEC@0.13526,K562@0.780496,MCF7@0.557902,NHEK@13.3278,NHLF@0.076119,SKNSHRA@0.51322, 0 0 0 0 ENSG00000151651.10 ENST00000468964.1 chr10:135083957-135084929 3 610 358 intergenic 19.63 0 0,1,1 0 0,1,1 0 0 18.403 81.1770491803279 5.39664804469274 79.852 245.427868852459 16.8631284916201 100.815 0 0 cat,chimp,cow,dog,elephant,guinea_pig,horse,human,macaque,marmoset,mouse,opossum,orangutan,panda,pig,platypus,rabbit,rat, lincRNA lincRNA A549@0.278142,AG04450@0.081278,BJ@0.135739,GM12878@3.71779,H1HESC@2.75834,HELAS3@0.377895,HEPG2@0.271497,HMEC@5.41175,HSMM@0.0909685,HUVEC@0.13526,K562@0.780496,MCF7@0.557902,NHEK@13.3278,NHLF@0.076119,SKNSHRA@0.51322, 0 0 0 0 ENSG00000151651.10 ENST00000537099.1 chr10:135085318-135089498 10 1569 2593 intergenic 90.07 0 0,1,1 1 0,1,1 11.7291268323773 0 0 210.026131293818 5.9105283455457 1.578 157.189292543021 10.2915541843425 2.259 0 0 cat,chimp,cow,dog,elephant,human,macaque,marmoset,opossum,orangutan,panda,rabbit, lincRNA lincRNA A549@0.278142,AG04450@0.081278,BJ@0.135739,GM12878@3.71779,H1HESC@2.75834,HELAS3@0.377895,HEPG2@0.271497,HMEC@5.41175,HSMM@0.0909685,HUVEC@0.13526,K562@0.780496,MCF7@0.557902,NHEK@13.3278,NHLF@0.076119,SKNSHRA@0.51322, 0 0 0 0 ENSG00000151651.10 ENST00000463298.1 chr10:135086242-135090360 7 1115 2991 intergenic 6.20 0 0,1,1 1 0,1,1 0 0 0 136.812556053812 4.14677365429622 0 143.938116591928 7.14409896355734 0 0 0 cat,cow,dog,guinea_pig,human,macaque,marmoset,mouse,opossum,orangutan,panda,pig,rabbit,rat, lincRNA lincRNA A549@0.278142,AG04450@0.081278,BJ@0.135739,GM12878@3.71779,H1HESC@2.75834,HELAS3@0.377895,HEPG2@0.271497,HMEC@5.41175,HSMM@0.0909685,HUVEC@0.13526,K562@0.780496,MCF7@0.557902,NHEK@13.3278,NHLF@0.076119,SKNSHRA@0.51322, 0 0 0 0 ENSG00000151651.10 ENST00000486609.1 chr10:135086790-135090361 7 769 2790 intergenic 10.33 0 0,1,0 1 0,1,1 0 0 0 165.031209362809 4.13512544802867 0 165.015604681404 7.11039426523297 0 0 0 cat,chimp,cow,dog,elephant,guinea_pig,human,macaque,marmoset,opossum,orangutan,panda,pig,platypus,rabbit,rat, lincRNA lincRNA A549@0.278142,AG04450@0.081278,BJ@0.135739,GM12878@3.71779,H1HESC@2.75834,HELAS3@0.377895,HEPG2@0.271497,HMEC@5.41175,HSMM@0.0909685,HUVEC@0.13526,K562@0.780496,MCF7@0.557902,NHEK@13.3278,NHLF@0.076119,SKNSHRA@0.51322, 0 0 0 0 ENSG00000235245.1 ENST00000424450.1 chr10:135108691-135109481 3 623 163 intronic 1.65 0 0,1,1 0 0,0,0 0 0 0 0 0 0 0 0 0 0 0 chimp,human,macaque,marmoset,orangutan, antisense antisense A549@0.558886,AG04450@0.48176,BJ@0.871609,GM12878@0.687939,H1HESC@1.35615,HELAS3@1.62483,HEPG2@1.77622,HMEC@0.152876,HSMM@0.320133,HUVEC@0.906015,K562@0.854845,MCF7@0.799249,NHEK@0.607885,NHLF@0.179897,SKNSHRA@1.61146, 0 0 0 0 ENSG00000226699.1 ENST00000452591.1 chr10:135159258-135164230 2 182 4788 intronic 0 0 0,1,0 0 0,0,0 0 0 0 0 0.741436925647452 6.358 0 0.664160401002506 15.848 0 0 chimp,human,macaque,orangutan, antisense antisense A549@0.384276,AG04450@0.246661,BJ@0.168712,GM12878@0.1738,H1HESC@0.448657,HELAS3@1.15144,HEPG2@1.4742,HMEC@0,HSMM@0,HUVEC@0.192353,K562@0.0575255,MCF7@0.02761,NHEK@0.238075,NHLF@0,SKNSHRA@0.766756, 0 0 0 0 ENSG00000254468.1 ENST00000529266.1 chr11:121279-125784 2 353 4150 intergenic 0 0 0,0,0 0 0,0,0 0 0 0 0 0 0 301.305949008499 267.486746987952 17.11 0 0 chimp,cow,dog,elephant,guinea_pig,horse,human,macaque,marmoset,mouse,orangutan,pig,platypus,rat, lincRNA lincRNA A549@0.0628105,AG04450@0.093342,BJ@0.0684845,GM12878@0.118982,H1HESC@0.173837,HELAS3@0.953555,HEPG2@2.58724,HMEC@0.023068,HSMM@0.010539,HUVEC@0.037126,K562@0.800203,MCF7@0.166106,NHEK@0.050244,NHLF@0.0054355,SKNSHRA@0.211372, 5 7 2 7 ENSG00000230724.3 ENST00000540375.1 chr11:127115-131056 2 2659 1280 intergenic 6.26 0 0,0,1 0 0,1,0 0 0 0 0 0 0 340.127491538172 223.08671875 348.965 0 0 chimp,human,macaque,marmoset,orangutan,rabbit, lincRNA processed_transcript A549@1.53041,AG04450@0.983704,BJ@1.38081,GM12878@2.4737,H1HESC@16.218,HELAS3@2.8839,HEPG2@5.78202,HMEC@1.00955,HSMM@1.42866,HUVEC@4.82979,K562@14.2024,MCF7@6.87434,NHEK@2.86169,NHLF@1.82942,SKNSHRA@7.70049, 32 3 19 3 ENSG00000230724.3 ENST00000457006.1 chr11:128960-131297 2 1156 1179 intergenic 6.26 0 0,0,1 0 0,1,0 0 0 0 0 0 0 341.538062283737 426.064461407973 205.329 0 0 chimp,human,macaque,marmoset,orangutan,platypus,rabbit, lincRNA processed_transcript A549@1.53041,AG04450@0.983704,BJ@1.38081,GM12878@2.4737,H1HESC@16.218,HELAS3@2.8839,HEPG2@5.78202,HMEC@1.00955,HSMM@1.42866,HUVEC@4.82979,K562@14.2024,MCF7@6.87434,NHEK@2.86169,NHLF@1.82942,SKNSHRA@7.70049, 93 2 53 2 ENSG00000255229.1 ENST00000527297.1 chr11:129279-186136 3 586 56267 intronic 0.51 0 0,1,0 0 0,0,0 0 0 0 0 0 0 33.4044368600683 24.0475056427391 278.726 0 1 chimp,human,marmoset,orangutan, lincRNA processed_transcript A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0.0549495,HMEC@0,HSMM@0,HUVEC@0,K562@0.420318,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000230724.3 ENST00000526704.1 chr11:129531-139099 5 2296 7264 intergenic 4.62 0 0,0,0 0 0,1,0 0 0 0 0 0 0 349.40287456446 74.9936674008811 0 0 0 cat,chimp,elephant,human,macaque,marmoset,orangutan,rabbit, lincRNA processed_transcript A549@1.53041,AG04450@0.983704,BJ@1.38081,GM12878@2.4737,H1HESC@16.218,HELAS3@2.8839,HEPG2@5.78202,HMEC@1.00955,HSMM@1.42866,HUVEC@4.82979,K562@14.2024,MCF7@6.87434,NHEK@2.86169,NHLF@1.82942,SKNSHRA@7.70049, 0 0 0 0 ENSG00000230724.3 ENST00000542435.1 chr11:129916-131374 3 1167 287 intergenic 4.24 0 0,0,0 0 0,1,0 0 0 0 0 0 0 503.468723221937 475.554006968641 159.437 0 0 cat,chimp,human,macaque,marmoset,orangutan,platypus,rat, lincRNA processed_transcript A549@1.53041,AG04450@0.983704,BJ@1.38081,GM12878@2.4737,H1HESC@16.218,HELAS3@2.8839,HEPG2@5.78202,HMEC@1.00955,HSMM@1.42866,HUVEC@4.82979,K562@14.2024,MCF7@6.87434,NHEK@2.86169,NHLF@1.82942,SKNSHRA@7.70049, 0 0 0 0 ENSG00000230724.3 ENST00000435244.2 chr11:130183-133779 3 1438 2154 intergenic 4.62 0 0,0,0 0 0,1,0 0 0 0 0 0 0 439.915855354659 81.9168987929434 368.305 0 0 cat,chimp,human,macaque,marmoset,orangutan,rabbit, lincRNA processed_transcript A549@1.53041,AG04450@0.983704,BJ@1.38081,GM12878@2.4737,H1HESC@16.218,HELAS3@2.8839,HEPG2@5.78202,HMEC@1.00955,HSMM@1.42866,HUVEC@4.82979,K562@14.2024,MCF7@6.87434,NHEK@2.86169,NHLF@1.82942,SKNSHRA@7.70049, 0 0 0 0 ENSG00000230724.3 ENST00000427071.1 chr11:130207-131297 2 1057 31 intergenic 4.62 0 0,0,0 0 0,1,0 0 0 0 0 0 0 505.585619678335 596 205.329 0 0 cat,chimp,elephant,human,macaque,marmoset,orangutan, lincRNA processed_transcript A549@1.53041,AG04450@0.983704,BJ@1.38081,GM12878@2.4737,H1HESC@16.218,HELAS3@2.8839,HEPG2@5.78202,HMEC@1.00955,HSMM@1.42866,HUVEC@4.82979,K562@14.2024,MCF7@6.87434,NHEK@2.86169,NHLF@1.82942,SKNSHRA@7.70049, 0 0 0 0 ENSG00000230724.3 ENST00000527683.1 chr11:133614-139117 5 678 4817 intergenic 0.73 0 0,0,0 0 0,1,0 0 0 0 0 0 0 39.7728613569322 70.8613244758148 0 1 1 chimp,human,macaque,marmoset,orangutan, lincRNA processed_transcript A549@1.53041,AG04450@0.983704,BJ@1.38081,GM12878@2.4737,H1HESC@16.218,HELAS3@2.8839,HEPG2@5.78202,HMEC@1.00955,HSMM@1.42866,HUVEC@4.82979,K562@14.2024,MCF7@6.87434,NHEK@2.86169,NHLF@1.82942,SKNSHRA@7.70049, 0 0 0 0 ENSG00000254559.1 ENST00000526963.1 chr11:203623-205470 2 572 1273 exonic 5.65 0 0,0,0 0 0,0,0 25.6783216783217 0 0 66.7744755244755 14.5003927729772 0 80.8426573426573 14.172034564022 0 0 0 cat,chimp,horse,human,macaque,marmoset,opossum,orangutan,panda,pig,rabbit,rat, antisense antisense A549@0.0134055,AG04450@0.008008,BJ@0,GM12878@0.014048,H1HESC@0.0051775,HELAS3@0,HEPG2@0.0037905,HMEC@0.007133,HSMM@0.0132725,HUVEC@0,K562@0.009497,MCF7@0.0140105,NHEK@0.0069,NHLF@0.0067985,SKNSHRA@0.037487, 0 0 0 0 ENSG00000255026.1 ENST00000533924.1 chr11:287305-288298 2 307 684 intergenic 0 0 0,0,1 0 0,0,0 0 0 0 0 0 0 0 0 327.148 0 1 human,macaque,orangutan, antisense antisense A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0.0941625,HELAS3@0,HEPG2@0.0069065,HMEC@0,HSMM@0,HUVEC@0,K562@0.851799,MCF7@0.006517,NHEK@0.001626,NHLF@0,SKNSHRA@0.0036835, 0 0 0 0 ENSG00000255026.1 ENST00000534742.1 chr11:288038-288987 2 810 137 intergenic 1.52 0 1,1,1 0 0,0,0 0 0 0 0 0 0 18.5925925925926 0 566 0 1 human,macaque,orangutan, antisense antisense A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0.0941625,HELAS3@0,HEPG2@0.0069065,HMEC@0,HSMM@0,HUVEC@0,K562@0.851799,MCF7@0.006517,NHEK@0.001626,NHLF@0,SKNSHRA@0.0036835, 0 0 0 0 ENSG00000255026.1 ENST00000525217.1 chr11:288086-288978 3 614 274 intergenic 0 0 1,1,1 0 0,0,0 0 0 0 0 0 0 0 54.963503649635 0 0 1 human,macaque,orangutan, antisense antisense A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0.0941625,HELAS3@0,HEPG2@0.0069065,HMEC@0,HSMM@0,HUVEC@0,K562@0.851799,MCF7@0.006517,NHEK@0.001626,NHLF@0,SKNSHRA@0.0036835, 0 0 0 0 ENSG00000254910.1 ENST00000526612.1 chr11:310139-311141 2 390 610 intronic 0 0 0,1,1 0 0,0,0 0 0 0 0 0 0 0 41.0147540983607 50.659 0 0 chimp,horse,human,macaque,orangutan, antisense antisense A549@1.02265,AG04450@0.442122,BJ@1.15438,GM12878@0.679297,H1HESC@2.14352,HELAS3@0.76113,HEPG2@0.937371,HMEC@0.104455,HSMM@0.115172,HUVEC@0.619935,K562@2.03876,MCF7@0.143114,NHEK@0.119854,NHLF@0.456062,SKNSHRA@2.18541, 183 2 118 2 ENSG00000251661.2 ENST00000508004.2 chr11:318640-319615 2 364 609 intergenic 0 1 0,1,1 0 0,0,0 0 0 0 0 0 0 0 0 0 0 0 chimp,horse,human,macaque,orangutan, lincRNA processed_transcript A549@0.438063,AG04450@0.160937,BJ@0.474255,GM12878@0.507524,H1HESC@1.124,HELAS3@0.493582,HEPG2@0.571163,HMEC@0.022375,HSMM@0.0503735,HUVEC@0.292071,K562@0.899653,MCF7@0.067662,NHEK@0.0588227,NHLF@0.189039,SKNSHRA@1.16698, 183 2 118 2 ENSG00000255089.1 ENST00000534271.1 chr11:321991-322426 2 278 155 intergenic 0 0 0,0,0 0 0,0,0 0 0 0 0 0 0 485.701438848921 491 215.549 0 1 chimp,human, antisense antisense A549@0.866189,AG04450@0.355587,BJ@0.39659,GM12878@0.792983,H1HESC@1.23058,HELAS3@0.65607,HEPG2@0.338907,HMEC@0.043871,HSMM@0.64139,HUVEC@0.492445,K562@0.729104,MCF7@0.254241,NHEK@0.0164683,NHLF@0.963549,SKNSHRA@2.40634, 0 0 0 0 ENSG00000255328.1 ENST00000534483.1 chr11:327171-329453 2 825 1455 intergenic 0 0 0,1,1 0 0,0,0 0 0 0 0 0 0 0 0 0 1 1 chimp,human,macaque,marmoset,orangutan, lincRNA lincRNA A549@0.044841,AG04450@0.0035795,BJ@0.0185515,GM12878@0.082711,H1HESC@0,HELAS3@0.0265565,HEPG2@0.070077,HMEC@0,HSMM@0.004606,HUVEC@0.083752,K562@0.081715,MCF7@0,NHEK@0,NHLF@0.009202,SKNSHRA@0.096116, 0 0 0 0 ENSG00000255328.1 ENST00000524824.1 chr11:327310-330122 3 584 2224 intergenic -2.48 0 1,1,1 1 0,0,0 0 0 0 0 0 0 0 0 0 0 1 chimp,human,macaque,orangutan, lincRNA lincRNA A549@0.044841,AG04450@0.0035795,BJ@0.0185515,GM12878@0.082711,H1HESC@0,HELAS3@0.0265565,HEPG2@0.070077,HMEC@0,HSMM@0.004606,HUVEC@0.083752,K562@0.081715,MCF7@0,NHEK@0,NHLF@0.009202,SKNSHRA@0.096116, 0 0 0 0 ENSG00000255328.1 ENST00000531076.1 chr11:327400-327957 2 455 100 intergenic -4.92 0 0,1,1 1 0,0,0 0 0 0 0 0 0 0 0 0 1 1 chimp,human,macaque,marmoset,orangutan, lincRNA lincRNA A549@0.044841,AG04450@0.0035795,BJ@0.0185515,GM12878@0.082711,H1HESC@0,HELAS3@0.0265565,HEPG2@0.070077,HMEC@0,HSMM@0.004606,HUVEC@0.083752,K562@0.081715,MCF7@0,NHEK@0,NHLF@0.009202,SKNSHRA@0.096116, 0 0 0 0 ENSG00000255237.1 ENST00000525893.1 chr11:462930-463899 2 662 305 intronic -3.26 0 0,1,0 0 0,0,0 0 0 0 0 0 0 136.912386706949 291.796721311475 201.369 1 1 chimp,human,macaque,marmoset,orangutan, antisense antisense A549@0,AG04450@0,BJ@0,GM12878@0.0088085,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 2 44 0 0 ENSG00000254739.1 ENST00000526431.1 chr11:528907-529659 2 545 205 intergenic 2.38 0 0,0,0 0 0,0,0 0 0 0 0 0 0 189.76880733945 0 0 1 1 chimp,human,macaque,marmoset,orangutan, antisense antisense A549@0.200036,AG04450@0.151002,BJ@0.16041,GM12878@0.030288,H1HESC@0.31352,HELAS3@0.216802,HEPG2@0.255852,HMEC@0,HSMM@0.104093,HUVEC@0.198892,K562@0.310428,MCF7@0.841128,NHEK@0.0384897,NHLF@0.296222,SKNSHRA@0.231718, 0 0 0 0 ENSG00000254815.1 ENST00000527620.1 chr11:557595-560106 2 2208 301 exonic 10.34 1 1,1,1 0 0,1,0 0 0 0 40.1458333333333 0 22.857 37.5294384057971 0 26.063 0 0 cat,chimp,dog,elephant,horse,human,mouse,orangutan,panda, antisense antisense A549@0.622235,AG04450@0.01228,BJ@0.0232395,GM12878@0.016672,H1HESC@2.76323,HELAS3@0.162748,HEPG2@0.256046,HMEC@0.085227,HSMM@0.003686,HUVEC@0.010641,K562@0.295675,MCF7@0.417277,NHEK@0.259647,NHLF@0.0021955,SKNSHRA@5.43173, 0 0 0 0 ENSG00000254815.1 ENST00000527113.1 chr11:558892-560106 3 524 686 exonic -0.44 1 0,0,1 0 0,1,0 0 0 0 37.1545801526718 3.06705539358601 61.083 45.324427480916 4.1399416909621 47.825 0 0 cat,chimp,dog,horse,human,macaque,marmoset, antisense antisense A549@0.622235,AG04450@0.01228,BJ@0.0232395,GM12878@0.016672,H1HESC@2.76323,HELAS3@0.162748,HEPG2@0.256046,HMEC@0.085227,HSMM@0.003686,HUVEC@0.010641,K562@0.295675,MCF7@0.417277,NHEK@0.259647,NHLF@0.0021955,SKNSHRA@5.43173, 0 0 0 0 ENSG00000254815.1 ENST00000533844.1 chr11:559476-560107 2 535 94 exonic -0.44 1 0,0,1 0 0,1,0 0 0 0 0 0 46.423 0 0 50.727 0 1 chimp,human,macaque,marmoset, antisense antisense A549@0.622235,AG04450@0.01228,BJ@0.0232395,GM12878@0.016672,H1HESC@2.76323,HELAS3@0.162748,HEPG2@0.256046,HMEC@0.085227,HSMM@0.003686,HUVEC@0.010641,K562@0.295675,MCF7@0.417277,NHEK@0.259647,NHLF@0.0021955,SKNSHRA@5.43173, 0 0 0 0 ENSG00000247095.2 ENST00000500447.1 chr11:565660-568420 2 1963 795 intergenic 0.09 1 1,1,1 1 0,0,0 0 33.2125786163522 0 3.63627101375446 78.4981132075472 65.754 3.36984207845135 101.041509433962 61.242 0 1 chimp,human,macaque,orangutan, lincRNA processed_transcript A549@0.813279,AG04450@0.696595,BJ@4.20482,GM12878@3.9237,H1HESC@3.40033,HELAS3@0.700137,HEPG2@5.42425,HMEC@7.93181,HSMM@2.80341,HUVEC@0.630534,K562@6.50811,MCF7@0.500316,NHEK@4.1807,NHLF@1.72162,SKNSHRA@3.28648, 0 0 0 0 ENSG00000247095.2 ENST00000528245.1 chr11:567083-568408 2 657 666 intergenic -0.93 0 1,1,1 1 0,0,0 0 39.6456456456456 0 3.98173515981735 93.7027027027027 65.754 3.14307458143075 120.612612612613 61.242 0 0 chimp,elephant,horse,human,macaque,marmoset,orangutan,panda,pig, lincRNA processed_transcript A549@0.813279,AG04450@0.696595,BJ@4.20482,GM12878@3.9237,H1HESC@3.40033,HELAS3@0.700137,HEPG2@5.42425,HMEC@7.93181,HSMM@2.80341,HUVEC@0.630534,K562@6.50811,MCF7@0.500316,NHEK@4.1807,NHLF@1.72162,SKNSHRA@3.28648, 0 0 0 0 ENSG00000247095.2 ENST00000533920.1 chr11:567144-568457 2 814 497 intergenic -0.93 0 1,1,1 1 0,0,0 0 53.1267605633803 0 3.21375921375921 125.565392354125 65.754 6.81695331695332 157.225352112676 59.945 0 0 cat,chimp,horse,human,macaque,marmoset,orangutan,pig, lincRNA processed_transcript A549@0.813279,AG04450@0.696595,BJ@4.20482,GM12878@3.9237,H1HESC@3.40033,HELAS3@0.700137,HEPG2@5.42425,HMEC@7.93181,HSMM@2.80341,HUVEC@0.630534,K562@6.50811,MCF7@0.500316,NHEK@4.1807,NHLF@1.72162,SKNSHRA@3.28648, 0 0 0 0 ENSG00000247095.2 ENST00000534540.1 chr11:567526-568369 2 365 476 intergenic 0 0 1,1,1 1 0,0,0 0 55.4705882352941 0 11.6465753424658 128.357142857143 65.754 15.6904109589041 161.682773109244 61.242 0 0 chimp,horse,human,macaque,marmoset,orangutan, lincRNA processed_transcript A549@0.813279,AG04450@0.696595,BJ@4.20482,GM12878@3.9237,H1HESC@3.40033,HELAS3@0.700137,HEPG2@5.42425,HMEC@7.93181,HSMM@2.80341,HUVEC@0.630534,K562@6.50811,MCF7@0.500316,NHEK@4.1807,NHLF@1.72162,SKNSHRA@3.28648, 0 0 0 0 ENSG00000246532.1 ENST00000500108.1 chr11:573801-575885 2 1666 416 intergenic 9.02 0 1,1,1 1 0,0,0 0 0 0 0 0 15.023 0 0 26.489 0 1 chimp,human,macaque,orangutan, lincRNA lincRNA A549@0.238912,AG04450@0.13996,BJ@0.227821,GM12878@0.120714,H1HESC@0.290555,HELAS3@0.341133,HEPG2@0.293079,HMEC@0.125195,HSMM@0.0849725,HUVEC@0.06969,K562@0.812528,MCF7@0.315295,NHEK@0.103299,NHLF@0.173504,SKNSHRA@0.502897, 0 0 0 0 ENSG00000255158.1 ENST00000527799.1 chr11:665910-678391 3 909 11568 intronic 9.24 0 0,0,0 0 0,0,0 0 0 0 0 4.41519709543569 0 0 15.9980117565698 0 0 0 chimp,horse,human,macaque,marmoset,orangutan, antisense antisense A549@0.012156,AG04450@0.0146935,BJ@0.010614,GM12878@0.015255,H1HESC@0,HELAS3@0.0209405,HEPG2@0,HMEC@0.00449,HSMM@0.01378,HUVEC@0.0292805,K562@0.005092,MCF7@0.06453,NHEK@0.00289533,NHLF@0.110592,SKNSHRA@0.0124475, 0 0 0 0 ENSG00000255142.1 ENST00000533938.1 chr11:781645-782105 2 282 176 intronic 0 0 0,1,1 0 0,0,0 0 0 0 0 0 0 0 0 0 1 1 chimp,human,macaque,marmoset,orangutan, antisense antisense A549@0,AG04450@0.034496,BJ@0,GM12878@0.06383,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0.036527,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000255108.1 ENST00000532946.1 chr11:823634-832883 3 533 8712 exonic 0 0 0,1,1 0 0,0,0 0 16.7011019283747 0 99.5759849906191 66.8962350780533 2.558 105.461538461538 67.4072543617998 7.166 0 0 cat,chimp,cow,dog,guinea_pig,horse,human,macaque,marmoset,mouse,opossum,orangutan,pig,platypus, antisense antisense A549@0.0214795,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0.005879,HMEC@0,HSMM@0.0090505,HUVEC@0.01151,K562@0.005004,MCF7@0,NHEK@0,NHLF@0.0036405,SKNSHRA@0.029623, 0 0 0 0 ENSG00000255108.1 ENST00000528982.1 chr11:823656-824645 2 462 525 exonic 0 0 0,1,1 0 0,0,0 19.2121212121212 47.7009523809524 12.336 127.738095238095 176.384761904762 51.992 180.307359307359 175.641904761905 49.396 0 0 cat,chimp,cow,guinea_pig,horse,human,macaque,marmoset,mouse,opossum,orangutan,panda,pig,platypus, antisense antisense A549@0.0214795,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0.005879,HMEC@0,HSMM@0.0090505,HUVEC@0.01151,K562@0.005004,MCF7@0,NHEK@0,NHLF@0.0036405,SKNSHRA@0.029623, 0 0 0 0 ENSG00000250397.2 ENST00000506172.2 chr11:856880-859795 2 2059 854 intronic 8.75 0 0,1,0 0 0,0,0 0 0 0 3.83487129674599 0 0 31.0087421078193 142.612412177986 0 1 1 chimp,human,macaque,marmoset,orangutan, antisense antisense A549@0.0663195,AG04450@0.02879,BJ@0.0141305,GM12878@0.032023,H1HESC@0.0459025,HELAS3@0.141554,HEPG2@0.178591,HMEC@0.003973,HSMM@0.0064205,HUVEC@0.0476445,K562@0.0130445,MCF7@0.156181,NHEK@0.012802,NHLF@0.242018,SKNSHRA@0.240552, 0 0 0 0 ENSG00000254872.1 ENST00000534584.1 chr11:1049880-1055284 4 625 4773 intergenic 4.91 0 0,1,0 0 0,0,0 0 0 0 0 9.19442698512466 0 0 9.18730358265242 0 1 1 chimp,human,macaque,marmoset,orangutan, lincRNA lincRNA A549@0.0616835,AG04450@0,BJ@0,GM12878@0,H1HESC@0.01397,HELAS3@0.0293775,HEPG2@0.008791,HMEC@0,HSMM@0.000726,HUVEC@0,K562@0,MCF7@0.0077585,NHEK@0,NHLF@0,SKNSHRA@0.0040175, 0 0 0 0 ENSG00000254872.1 ENST00000531160.1 chr11:1052611-1055749 1 3138 0 intergenic 6.14 1 0,0,1 0 0,0,0 0 0 0 10.8158062460166 0 9.945 10.755258126195 0 10.101 0 1 chimp,human,macaque,orangutan, lincRNA TEC A549@0.0616835,AG04450@0,BJ@0,GM12878@0,H1HESC@0.01397,HELAS3@0.0293775,HEPG2@0.008791,HMEC@0,HSMM@0.000726,HUVEC@0,K562@0,MCF7@0.0077585,NHEK@0,NHLF@0,SKNSHRA@0.0040175, 0 0 0 0 ENSG00000255177.1 ENST00000532061.1 chr11:1263526-1269227 2 389 5310 exonic 0.22 0 0,0,1 0 0,0,0 0 0 0 29.853470437018 1.24312617702448 0 58.5681233933162 7.52900188323917 1.442 0 0 cat,chimp,cow,dog,elephant,guinea_pig,horse,human,macaque,marmoset,mouse,opossum,orangutan,panda,platypus,rat, antisense antisense A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0.363617,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0.0116255, 0 0 0 0 ENSG00000255153.1 ENST00000530897.1 chr11:1330999-1331937 1 938 0 intergenic 10.10 1 1,1,1 0 0,0,0 0 0 18.6 5.13859275053305 0 26.576 5.76226012793177 0 51.359 0 1 chimp,human,macaque,orangutan, antisense antisense A549@0.34595,AG04450@0.3224,BJ@0.461821,GM12878@0.343458,H1HESC@1.06375,HELAS3@0.42853,HEPG2@0.862552,HMEC@0.222392,HSMM@0.264108,HUVEC@0.525524,K562@0.267747,MCF7@0.938166,NHEK@0.08763,NHLF@0.306389,SKNSHRA@0.431204, 0 0 0 0 ENSG00000233930.3 ENST00000524947.1 chr11:1592583-1618813 2 568 25660 exonic 6.27 0 0,1,0 0 0,1,0 0 8.44419329696025 0 0 11.0983632112237 16.431 0 11.4141465315666 17.545 0 0 chimp,horse,human,marmoset,orangutan, lincRNA processed_transcript A549@0.126298,AG04450@0,BJ@0.08219,GM12878@0.0084795,H1HESC@0.0323935,HELAS3@0.319296,HEPG2@0.12199,HMEC@0,HSMM@0.024067,HUVEC@0.112864,K562@0.0106585,MCF7@1.93144,NHEK@0.01464,NHLF@0,SKNSHRA@0.352864, 0 0 0 0 ENSG00000233930.3 ENST00000424148.1 chr11:1593971-1620414 2 2263 24178 exonic 5.97 0 0,1,1 0 0,1,0 40.1484754750331 0 216.678 63.724701723376 5.95206385970717 140.875 77.2819266460451 9.3118537513442 62.934 0 0 cat,chimp,cow,guinea_pig,horse,human,macaque,marmoset,opossum,orangutan,rabbit, lincRNA processed_transcript A549@0.126298,AG04450@0,BJ@0.08219,GM12878@0.0084795,H1HESC@0.0323935,HELAS3@0.319296,HEPG2@0.12199,HMEC@0,HSMM@0.024067,HUVEC@0.112864,K562@0.0106585,MCF7@1.93144,NHEK@0.01464,NHLF@0,SKNSHRA@0.352864, 0 0 0 0 ENSG00000233930.3 ENST00000532922.1 chr11:1594487-1618779 2 517 23773 exonic 6.32 0 0,0,0 0 0,1,0 0 0 57.084 0 6.05346401379717 64.176 0 9.3560762209229 56.416 0 0 chimp,dog,elephant,horse,human,macaque,marmoset,orangutan, lincRNA processed_transcript A549@0.126298,AG04450@0,BJ@0.08219,GM12878@0.0084795,H1HESC@0.0323935,HELAS3@0.319296,HEPG2@0.12199,HMEC@0,HSMM@0.024067,HUVEC@0.112864,K562@0.0106585,MCF7@1.93144,NHEK@0.01464,NHLF@0,SKNSHRA@0.352864, 0 0 0 0 ENSG00000233930.3 ENST00000534077.1 chr11:1594879-1618671 2 407 23383 exonic 6.59 0 0,1,0 0 0,1,0 0 0 0 0 6.15442843091135 1.984 0 9.51212419278963 7.531 1 1 chimp,human,macaque,marmoset,orangutan, lincRNA processed_transcript A549@0.126298,AG04450@0,BJ@0.08219,GM12878@0.0084795,H1HESC@0.0323935,HELAS3@0.319296,HEPG2@0.12199,HMEC@0,HSMM@0.024067,HUVEC@0.112864,K562@0.0106585,MCF7@1.93144,NHEK@0.01464,NHLF@0,SKNSHRA@0.352864, 0 0 0 0 ENSG00000231487.1 ENST00000415865.1 chr11:1683814-1684573 2 586 171 intergenic 7.96 1 0,1,1 0 0,0,0 0 0 0 0 0 0 0 0 0 0 0 chimp,human,macaque,marmoset,orangutan, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0.0045135,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0.066014,SKNSHRA@0, 141 2 86 2 ENSG00000205866.2 ENST00000382167.2 chr11:1686827-1689086 3 1429 826 intergenic 3.73 1 0,0,0 0 0,0,0 70.2365290412876 0 0 64.2855143456963 0 0 63.7662701189643 0 0 0 0 cat,chimp,dog,elephant,horse,human,macaque,marmoset,orangutan,panda, processed_transcript processed_transcript A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0.401652,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000205865.4 ENST00000382166.2 chr11:1704499-1706859 3 1064 1292 intergenic 3.73 0 0,1,1 0 0,0,0 24.9304511278195 0 0 27.0704887218045 0 0 35.8496240601504 7.86222910216718 0 0 0 cat,chimp,dog,elephant,horse,human,macaque,marmoset,orangutan,panda, antisense antisense A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0.129096,HEPG2@1.499,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000227306.1 ENST00000436539.1 chr11:1709527-1710286 2 585 172 intergenic 7.96 0 0,0,0 0 0,0,0 0 0 0 0 0 0 0 0 0 0 0 chimp,human,macaque,marmoset,orangutan, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0.0722245,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0.77699,SKNSHRA@0, 141 2 86 2 ENSG00000235027.1 ENST00000449248.1 chr11:1781578-1783716 2 2013 123 exonic 13.83 1 0,0,1 0 0,0,0 0 0 0 3.74962742175857 46.3089430894309 46.191 12.872826626925 58.5365853658537 50.982 0 0 chimp,cow,human,macaque,marmoset,orangutan,panda,rabbit, antisense antisense A549@0.0016735,AG04450@0,BJ@0.0024435,GM12878@0,H1HESC@0,HELAS3@0.0048765,HEPG2@0.0021145,HMEC@0,HSMM@0,HUVEC@0.0012065,K562@0,MCF7@0.037203,NHEK@0,NHLF@0,SKNSHRA@0.003384, 0 0 0 0 ENSG00000229512.1 ENST00000446489.1 chr11:1784239-1784979 2 250 488 intronic 0.27 0 0,0,0 0 0,0,0 0 0 0 0 0 24.06 0 0 61.66 0 0 chimp,human,macaque,marmoset, sense_intronic sense_intronic A549@0,AG04450@0,BJ@0.0179255,GM12878@0,H1HESC@0,HELAS3@0.019365,HEPG2@0,HMEC@0,HSMM@0.106519,HUVEC@0,K562@0,MCF7@0.0319625,NHEK@0.0114863,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000230834.1 ENST00000449749.1 chr11:1798160-1799618 2 336 1120 intergenic -0.04 0 0,0,1 0 0,0,0 0 0 0 0 0 21.312 0 9.95714285714286 21.409 0 0 human,macaque,marmoset, lincRNA lincRNA A549@0.014594,AG04450@0,BJ@0,GM12878@0,H1HESC@0.0061375,HELAS3@0,HEPG2@0,HMEC@0.157486,HSMM@0.575605,HUVEC@0,K562@0,MCF7@0.484377,NHEK@0.00389733,NHLF@0,SKNSHRA@0.0134365, 0 0 0 0 ENSG00000229671.1 ENST00000455671.1 chr11:1923877-1929145 3 312 4952 intergenic 0 0 0,0,0 0 0,0,0 0 0 0 0 0 0 0 0 0 0 0 chimp,human,macaque,orangutan, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@1.28772,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0.0840635,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000226416.1 ENST00000419080.1 chr11:2004467-2011150 4 1872 4805 exonic 8.63 0 1,1,1 1 0,0,0 0 8.83995837669095 0 5.21581196581197 12.7177939646202 28.755 5.55128205128205 15.4010405827263 37.184 0 0 chimp,horse,human,macaque,marmoset,orangutan, antisense antisense A549@0.001157,AG04450@0,BJ@0.0076285,GM12878@0.002499,H1HESC@0,HELAS3@0.517873,HEPG2@1.18183,HMEC@0,HSMM@0.262018,HUVEC@0.0014235,K562@0.272065,MCF7@0.0375815,NHEK@0,NHLF@0,SKNSHRA@0.002419, 0 0 0 0 ENSG00000232987.1 ENST00000418612.1 chr11:2012326-2014699 3 719 1650 intergenic -3.45 0 0,1,1 1 0,0,0 62.673157162726 7.00909090909091 7.084 57.5952712100139 33.729696969697 18.099 65.0778859527121 35.9333333333333 20.117 0 0 cat,chimp,cow,dog,guinea_pig,horse,human,macaque,marmoset,orangutan,panda, lincRNA lincRNA A549@0.089852,AG04450@0,BJ@0.011302,GM12878@0.0144145,H1HESC@0.14347,HELAS3@0.165778,HEPG2@1.24262,HMEC@0,HSMM@0.102428,HUVEC@0.008244,K562@0.171855,MCF7@0.031136,NHEK@0,NHLF@0,SKNSHRA@0.205121, 0 0 0 0 ENSG00000130600.9 ENST00000442037.1 chr11:2016406-2017421 3 795 216 intergenic -2.12 1 1,1,1 0 0,0,0 0 0 47.6 62.8377358490566 109.759259259259 92.92 61.0440251572327 107.893518518519 92.102 0 0 cat,chimp,dog,elephant,guinea_pig,horse,human,macaque,marmoset,mouse,orangutan,rat, lincRNA non_coding A549@11.9204,AG04450@0.0567705,BJ@0.691922,GM12878@0.0410405,H1HESC@2.66838,HELAS3@4.45381,HEPG2@1.58083,HMEC@0.214667,HSMM@5412.87,HUVEC@0.742525,K562@111.66,MCF7@30.1337,NHEK@3.25698,NHLF@1.03272,SKNSHRA@24.0641, 0 0 0 0 ENSG00000130600.9 ENST00000411861.1 chr11:2016406-2018447 4 1767 268 intergenic 10.58 1 1,1,1 1 0,0,0 26.9383135257499 0 75.675 91.6859083191851 13.4179104477612 113.568 90.1794001131862 13.4888059701493 118.919 0 0 cat,cow,dog,guinea_pig,horse,human,macaque,marmoset,mouse,orangutan,rat, lincRNA retained_intron A549@11.9204,AG04450@0.0567705,BJ@0.691922,GM12878@0.0410405,H1HESC@2.66838,HELAS3@4.45381,HEPG2@1.58083,HMEC@0.214667,HSMM@5412.87,HUVEC@0.742525,K562@111.66,MCF7@30.1337,NHEK@3.25698,NHLF@1.03272,SKNSHRA@24.0641, 0 0 0 0 ENSG00000130600.9 ENST00000439725.1 chr11:2016406-2018690 5 1924 352 intergenic 8.43 1 1,1,1 1 0,0,0 32.7733887733888 0 59.851 95.5379417879418 15.6704545454545 89.594 95.454261954262 15.7613636363636 92.428 0 0 cat,cow,dog,horse,human,macaque,marmoset,mouse,orangutan,rat, lincRNA non_coding A549@11.9204,AG04450@0.0567705,BJ@0.691922,GM12878@0.0410405,H1HESC@2.66838,HELAS3@4.45381,HEPG2@1.58083,HMEC@0.214667,HSMM@5412.87,HUVEC@0.742525,K562@111.66,MCF7@30.1337,NHEK@3.25698,NHLF@1.03272,SKNSHRA@24.0641, 0 0 0 0 ENSG00000130600.9 ENST00000412788.1 chr11:2016406-2019044 5 2276 354 intergenic 10.58 1 1,1,1 1 0,0,0 45.609841827768 0 19.195 105.198154657294 12.2598870056497 34.878 106.619947275923 12.3389830508475 34.291 0 0 cat,cow,dog,guinea_pig,horse,human,macaque,marmoset,mouse,orangutan,panda,rat, lincRNA non_coding A549@11.9204,AG04450@0.0567705,BJ@0.691922,GM12878@0.0410405,H1HESC@2.66838,HELAS3@4.45381,HEPG2@1.58083,HMEC@0.214667,HSMM@5412.87,HUVEC@0.742525,K562@111.66,MCF7@30.1337,NHEK@3.25698,NHLF@1.03272,SKNSHRA@24.0641, 0 0 0 0 ENSG00000130600.9 ENST00000414790.1 chr11:2016406-2019105 5 2343 348 intergenic 10.58 1 1,1,1 1 0,0,0 49.2479726845924 0 7.648 107.66709346991 12.4712643678161 21.881 109.035851472471 12.551724137931 21.377 0 0 cat,cow,dog,guinea_pig,horse,human,macaque,marmoset,mouse,orangutan,panda,rat, lincRNA non_coding A549@11.9204,AG04450@0.0567705,BJ@0.691922,GM12878@0.0410405,H1HESC@2.66838,HELAS3@4.45381,HEPG2@1.58083,HMEC@0.214667,HSMM@5412.87,HUVEC@0.742525,K562@111.66,MCF7@30.1337,NHEK@3.25698,NHLF@1.03272,SKNSHRA@24.0641, 0 0 0 0 ENSG00000130600.9 ENST00000535745.1 chr11:2016408-2019072 6 2084 570 intergenic 10.58 1 1,1,1 1 0,0,0 39.3013435700576 49.7122807017544 12.667 100.275911708253 66.0035087719298 32.001 102.462571976967 66.1508771929825 30.071 0 0 cat,cow,dog,guinea_pig,horse,human,macaque,marmoset,mouse,orangutan,panda,rat, lincRNA non_coding A549@11.9204,AG04450@0.0567705,BJ@0.691922,GM12878@0.0410405,H1HESC@2.66838,HELAS3@4.45381,HEPG2@1.58083,HMEC@0.214667,HSMM@5412.87,HUVEC@0.742525,K562@111.66,MCF7@30.1337,NHEK@3.25698,NHLF@1.03272,SKNSHRA@24.0641, 0 0 0 0 ENSG00000130600.9 ENST00000422826.1 chr11:2016440-2019027 3 1793 790 intergenic 7.78 1 1,1,1 1 0,0,0 43.9397657557167 25.4784810126582 23.819 200.829336307864 86.5708860759494 38.691 204.106525376464 85.9544303797469 38.216 0 0 cat,dog,elephant,guinea_pig,horse,human,macaque,marmoset,mouse,orangutan,rat, lincRNA non_coding A549@11.9204,AG04450@0.0567705,BJ@0.691922,GM12878@0.0410405,H1HESC@2.66838,HELAS3@4.45381,HEPG2@1.58083,HMEC@0.214667,HSMM@5412.87,HUVEC@0.742525,K562@111.66,MCF7@30.1337,NHEK@3.25698,NHLF@1.03272,SKNSHRA@24.0641, 0 0 0 0 ENSG00000130600.9 ENST00000446406.1 chr11:2016446-2019057 6 1606 995 intergenic 10.58 1 1,1,1 1 0,0,0 50.8991282689913 25.0854271356784 15.659 109.95703611457 57.1236180904523 34.024 111.288916562889 59.4170854271357 32.171 0 0 cat,cow,dog,elephant,guinea_pig,horse,human,macaque,marmoset,mouse,orangutan,rat, lincRNA non_coding A549@11.9204,AG04450@0.0567705,BJ@0.691922,GM12878@0.0410405,H1HESC@2.66838,HELAS3@4.45381,HEPG2@1.58083,HMEC@0.214667,HSMM@5412.87,HUVEC@0.742525,K562@111.66,MCF7@30.1337,NHEK@3.25698,NHLF@1.03272,SKNSHRA@24.0641, 0 0 0 0 ENSG00000130600.9 ENST00000417089.1 chr11:2016464-2018255 5 1439 344 intergenic 8.11 1 1,1,1 0 0,0,0 33.0785267546908 0 75.675 94.8700486448923 9.55813953488372 125.115 92.3884642112578 9.61627906976744 131.219 0 0 cat,cow,dog,guinea_pig,horse,human,macaque,marmoset,mouse,orangutan,rat, lincRNA non_coding A549@11.9204,AG04450@0.0567705,BJ@0.691922,GM12878@0.0410405,H1HESC@2.66838,HELAS3@4.45381,HEPG2@1.58083,HMEC@0.214667,HSMM@5412.87,HUVEC@0.742525,K562@111.66,MCF7@30.1337,NHEK@3.25698,NHLF@1.03272,SKNSHRA@24.0641, 0 0 0 0 ENSG00000130600.9 ENST00000411754.1 chr11:2016467-2019027 6 1782 768 intergenic 10.58 1 1,1,1 1 0,0,0 27.7800224466891 64.6875 23.819 99.8860830527497 61.2721354166667 38.691 100.102132435466 64.7057291666667 38.216 0 0 cat,cow,dog,guinea_pig,horse,human,macaque,marmoset,mouse,orangutan,rat, lincRNA non_coding A549@11.9204,AG04450@0.0567705,BJ@0.691922,GM12878@0.0410405,H1HESC@2.66838,HELAS3@4.45381,HEPG2@1.58083,HMEC@0.214667,HSMM@5412.87,HUVEC@0.742525,K562@111.66,MCF7@30.1337,NHEK@3.25698,NHLF@1.03272,SKNSHRA@24.0641, 0 0 0 0 ENSG00000130600.9 ENST00000431095.1 chr11:2016467-2019045 6 1475 1093 intergenic 10.58 1 1,1,1 1 0,0,0 36.8813559322034 45.4528819762123 18.923 101.255593220339 73.103385178408 310.602 101.741016949153 75.3156450137237 33.987 0 0 cat,cow,dog,guinea_pig,horse,human,macaque,marmoset,mouse,orangutan,rat, lincRNA non_coding A549@11.9204,AG04450@0.0567705,BJ@0.691922,GM12878@0.0410405,H1HESC@2.66838,HELAS3@4.45381,HEPG2@1.58083,HMEC@0.214667,HSMM@5412.87,HUVEC@0.742525,K562@111.66,MCF7@30.1337,NHEK@3.25698,NHLF@1.03272,SKNSHRA@24.0641, 0 0 0 0 ENSG00000130600.9 ENST00000436715.1 chr11:2016669-2017801 4 857 269 intergenic 5.53 0 0,1,1 0 0,0,0 0 0 97.28 84.0233372228705 12.4795539033457 125.925 81.4422403733956 12.5985130111524 126.762 0 0 cat,chimp,cow,dog,elephant,guinea_pig,horse,human,macaque,marmoset,mouse,orangutan,rat, lincRNA retained_intron A549@11.9204,AG04450@0.0567705,BJ@0.691922,GM12878@0.0410405,H1HESC@2.66838,HELAS3@4.45381,HEPG2@1.58083,HMEC@0.214667,HSMM@5412.87,HUVEC@0.742525,K562@111.66,MCF7@30.1337,NHEK@3.25698,NHLF@1.03272,SKNSHRA@24.0641, 0 0 0 0 ENSG00000130600.9 ENST00000428066.1 chr11:2016913-2022700 5 731 5048 intergenic 18.40 0 0,0,1 0 0,0,0 0 24.4205625990491 0 60.7920656634747 39.2428684627575 3.06 58.1203830369357 40.1551109350238 3.108 0 0 chimp,guinea_pig,human,macaque,marmoset,orangutan, lincRNA non_coding A549@11.9204,AG04450@0.0567705,BJ@0.691922,GM12878@0.0410405,H1HESC@2.66838,HELAS3@4.45381,HEPG2@1.58083,HMEC@0.214667,HSMM@5412.87,HUVEC@0.742525,K562@111.66,MCF7@30.1337,NHEK@3.25698,NHLF@1.03272,SKNSHRA@24.0641, 0 0 0 0 ENSG00000130600.9 ENST00000447298.1 chr11:2016918-2017697 4 520 253 intergenic 3.92 0 0,1,1 0 0,0,0 0 0 66 86.5903846153846 8.71541501976285 103.029 82.8384615384615 8.76679841897233 104.75 0 0 cat,chimp,guinea_pig,human,macaque,marmoset,mouse,orangutan,panda,rat, lincRNA non_coding A549@11.9204,AG04450@0.0567705,BJ@0.691922,GM12878@0.0410405,H1HESC@2.66838,HELAS3@4.45381,HEPG2@1.58083,HMEC@0.214667,HSMM@5412.87,HUVEC@0.742525,K562@111.66,MCF7@30.1337,NHEK@3.25698,NHLF@1.03272,SKNSHRA@24.0641, 0 0 0 0 ENSG00000238184.1 ENST00000427151.1 chr11:2349979-2399219 3 1168 48068 exonic 9.18 1 0,1,1 0 0,0,0 0 0.988141799117916 18.381 16.4760273972603 2.36731297328784 6.38 25.8724315068493 9.8471540317883 5.9 0 0 chimp,human, processed_transcript processed_transcript A549@0.077606,AG04450@0.119479,BJ@0.25788,GM12878@0.558635,H1HESC@0.191774,HELAS3@0.132903,HEPG2@0.012419,HMEC@0,HSMM@0.0520785,HUVEC@0.0503825,K562@0.051861,MCF7@0.064671,NHEK@0.035743,NHLF@0.111938,SKNSHRA@0.981304, 0 0 0 0 ENSG00000238184.1 ENST00000413483.1 chr11:2349979-2399222 3 1457 47782 exonic 9.18 1 0,1,1 0 0,0,0 0 0.994056339207233 18.381 13.2079615648593 2.3814825666569 6.38 20.7405628002745 9.9060943451509 5.9 0 0 human, processed_transcript processed_transcript A549@0.077606,AG04450@0.119479,BJ@0.25788,GM12878@0.558635,H1HESC@0.191774,HELAS3@0.132903,HEPG2@0.012419,HMEC@0,HSMM@0.0520785,HUVEC@0.0503825,K562@0.051861,MCF7@0.064671,NHEK@0.035743,NHLF@0.111938,SKNSHRA@0.981304, 0 0 0 0 ENSG00000230483.1 ENST00000433035.1 chr11:2425745-2429138 2 402 2989 exonic -0.74 0 0,1,0 0 0,0,0 28.9253731343284 22.1100702576112 0 63.9353233830846 47.4603546336567 11.477 72.3980099502488 63.1759785881566 21.487 0 0 chimp,elephant,horse,human,macaque,marmoset,orangutan,panda, antisense antisense A549@0.185762,AG04450@0.132263,BJ@0.078859,GM12878@0.199271,H1HESC@0.0732555,HELAS3@0.57953,HEPG2@0.487387,HMEC@0.02027,HSMM@0.271588,HUVEC@0.182912,K562@0.073854,MCF7@0.0175515,NHEK@0.00964433,NHLF@0.020107,SKNSHRA@0.574979, 0 0 0 0 ENSG00000229414.2 ENST00000440887.2 chr11:2861365-2882798 3 1081 20348 intronic 2.24 1 0,0,1 0 0,0,0 0 9.54894829958718 68.385 0 17.1669451543149 74.472 0 21.3398859838805 78.764 0 0 chimp,human,macaque,marmoset,orangutan,panda, lincRNA processed_transcript A549@0.005096,AG04450@0,BJ@0,GM12878@0.0037195,H1HESC@0.082519,HELAS3@0.0399625,HEPG2@0.007862,HMEC@0,HSMM@0,HUVEC@0,K562@0.0490975,MCF7@0,NHEK@0,NHLF@0.0018,SKNSHRA@0.010465, 0 0 0 0 ENSG00000237941.2 ENST00000441418.2 chr11:2891263-2893335 2 1091 979 intergenic -0.68 1 0,1,0 0 0,0,0 0 63.0847803881512 270.036 0 53.6098059244127 360.033 0 52.6394279877426 383.493 0 0 chimp,human,macaque,marmoset,orangutan, antisense non_coding A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0.0181115,HELAS3@0.0097125,HEPG2@0,HMEC@0,HSMM@0.0139405,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000224636.2 ENST00000439505.2 chr11:2965668-2966753 2 546 537 exonic -1.22 0 1,1,1 0 0,0,0 154.556776556777 0 0 130.093406593407 4.27374301675978 0 190.234432234432 5.17877094972067 0 0 0 cat,chimp,cow,dog,guinea_pig,horse,human,macaque,marmoset,orangutan,panda,pig, antisense antisense A549@0,AG04450@0.0042975,BJ@0,GM12878@0,H1HESC@0.010734,HELAS3@0.015234,HEPG2@0.0099555,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0.011274,NHLF@0,SKNSHRA@0.0041475, 0 0 0 0 ENSG00000247473.1 ENST00000499962.1 chr11:3050624-3062490 2 2662 9202 exonic 2.76 0 0,1,0 0 0,0,0 7.3313298271976 0 25.704 17.2096168294515 5.40523799174093 64.315 21.0063861758077 12.4176266029124 84.784 1 1 chimp,human,macaque,marmoset,orangutan, antisense antisense A549@0.005784,AG04450@0.0025665,BJ@0.003047,GM12878@0,H1HESC@0,HELAS3@0.00858,HEPG2@0.0061435,HMEC@0,HSMM@0,HUVEC@0,K562@0.00201,MCF7@0,NHEK@0.000479333,NHLF@0,SKNSHRA@0.000853, 0 0 0 0 ENSG00000234791.1 ENST00000455154.1 chr11:3210776-3211159 2 291 90 intergenic 4.13 1 0,0,0 0 0,0,0 0 0 0 0 0 0 0 0 0 0 0 chimp,human,macaque,marmoset, antisense antisense A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0.833267,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000224513.2 ENST00000418995.2 chr11:3247291-3254068 3 432 6341 encompassing 3.24 0 0,1,1 0 0,0,0 0 2.50307522472796 0 0 2.08169058508122 0 0 3.48225831887715 0 0 1 chimp,human,macaque,orangutan, antisense antisense A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0.011377,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000254592.1 ENST00000526922.1 chr11:3357951-3361860 2 781 3126 intronic 1.20 0 0,0,1 0 0,0,0 0 0 0 0 0 0 0 50.3458093410109 0 0 0 cat,chimp,horse,human,macaque,marmoset,orangutan, antisense antisense A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0.139836,MCF7@0,NHEK@0.00336467,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000254757.1 ENST00000534291.1 chr11:3490549-3552558 3 447 61558 intergenic 6.91 0 0,0,0 0 0,0,0 0 0 0 0 2.5291757367036 0 0 9.20445758471685 0 1 1 chimp,human,macaque,marmoset,orangutan, lincRNA lincRNA A549@0,AG04450@0.0099615,BJ@0,GM12878@0.069643,H1HESC@0.019402,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0.0180635,MCF7@0,NHEK@0.00283667,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000256000.1 ENST00000545935.1 chr11:3494803-3498280 2 2907 568 intergenic 1.83 0 0,1,0 0 0,0,0 0 0 0 0 0 0 0 0 0 0 0 NA lincRNA lincRNA A549@0,AG04450@0.0017415,BJ@0.001664,GM12878@0.0036425,H1HESC@0.127896,HELAS3@0,HEPG2@0,HMEC@0.327549,HSMM@0,HUVEC@0,K562@0.0237435,MCF7@0.27118,NHEK@0.332369,NHLF@0,SKNSHRA@0.000883, 61 2 0 0 ENSG00000256000.1 ENST00000382076.3 chr11:3495285-3498281 3 2571 421 intergenic 5.62 0 0,1,0 0 0,0,0 0 0 0 0 0 0 0 0 0 0 0 NA lincRNA lincRNA A549@0,AG04450@0.0017415,BJ@0.001664,GM12878@0.0036425,H1HESC@0.127896,HELAS3@0,HEPG2@0,HMEC@0.327549,HSMM@0,HUVEC@0,K562@0.0237435,MCF7@0.27118,NHEK@0.332369,NHLF@0,SKNSHRA@0.000883, 0 0 0 0 ENSG00000255367.1 ENST00000527970.1 chr11:3502750-3602441 5 978 98705 intergenic 13.90 0 0,1,0 0 0,0,0 0 0 0 27.6748466257669 4.86642014082367 15.254 167.579754601227 27.0348715870523 42.075 0 0 chimp,horse,human, processed_transcript processed_transcript A549@0.019766,AG04450@0.0030115,BJ@0.0451385,GM12878@0.012955,H1HESC@0.272651,HELAS3@0.012346,HEPG2@0,HMEC@0,HSMM@0.002093,HUVEC@0,K562@0.0947435,MCF7@0.098724,NHEK@0,NHLF@0,SKNSHRA@0.0083935, 0 0 0 0 ENSG00000255367.1 ENST00000526533.1 chr11:3529210-3593217 3 575 63428 intergenic -6.00 0 0,0,0 0 0,0,0 0 0 0 0 5.3360030270543 38.586 0 33.4001229740809 41.536 0 0 chimp,horse,human,macaque,marmoset,orangutan, processed_transcript processed_transcript A549@0.019766,AG04450@0.0030115,BJ@0.0451385,GM12878@0.012955,H1HESC@0.272651,HELAS3@0.012346,HEPG2@0,HMEC@0,HSMM@0.002093,HUVEC@0,K562@0.0947435,MCF7@0.098724,NHEK@0,NHLF@0,SKNSHRA@0.0083935, 0 0 0 0 ENSG00000228661.1 ENST00000415809.1 chr11:3875548-3876739 2 492 697 exonic 4.47 0 1,1,1 0 0,0,0 208.682926829268 0 126.324 252.329268292683 76.428981348637 225.327 239.071138211382 72.9569583931133 172.25 0 0 cat,chimp,cow,dog,elephant,guinea_pig,horse,human,macaque,marmoset,mouse,orangutan,panda,pig,rat, antisense antisense A549@0.220129,AG04450@0.062244,BJ@0.071,GM12878@0.273079,H1HESC@0.0442725,HELAS3@0.114456,HEPG2@0.165521,HMEC@0.041444,HSMM@0.052678,HUVEC@0.0240975,K562@0.071768,MCF7@0.0226775,NHEK@0.026111,NHLF@0.0196615,SKNSHRA@0.166477, 0 0 0 0 ENSG00000255276.1 ENST00000529323.1 chr11:4158346-4159487 2 344 795 exonic -5.40 0 0,1,0 0 0,0,0 81.5406976744186 0 63.931 128.511627906977 0 132.815 150.898255813953 361.056603773585 120.122 0 0 guinea_pig,human,marmoset, antisense antisense A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000236897.1 ENST00000428160.1 chr11:5127292-5128760 2 867 599 intergenic -0.56 0 0,0,1 0 0,0,0 0 0 0 0 0 0 0 0 0 0 0 cat,chimp,cow,dog,guinea_pig,horse,human,orangutan,rabbit, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000224091.1 ENST00000418080.1 chr11:5226271-5228538 2 520 1745 intergenic -2.92 0 0,1,0 0 0,0,0 0 0 0 0 0 0 0 0 0 0 0 cat,chimp,elephant,horse,human,macaque,orangutan,rabbit, antisense antisense A549@0,AG04450@0.135104,BJ@0,GM12878@0,H1HESC@0.0227725,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0.053968,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000255257.1 ENST00000528915.1 chr11:5959981-5966214 3 570 5659 intergenic -3.65 0 0,1,0 0 0,0,0 0 0 0 0 0 0 0 0 0 0 1 chimp,human,macaque, lincRNA lincRNA A549@0,AG04450@0,BJ@0.0187325,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000254444.1 ENST00000529961.1 chr11:6129365-6206806 3 813 76624 exonic 1.62 0 0,0,0 0 0,0,0 19.070110701107 13.0023230319482 0 62.1845018450184 11.6161385466695 0 61.9618696186962 23.9816115055335 0 0 0 cat,chimp,cow,dog,elephant,guinea_pig,horse,human,macaque,marmoset,mouse,opossum,orangutan,panda,pig,platypus,rabbit,rat, processed_transcript processed_transcript A549@0.012567,AG04450@0.0246565,BJ@0.0062765,GM12878@0.026316,H1HESC@0.329759,HELAS3@0,HEPG2@0.005222,HMEC@0.005018,HSMM@0,HUVEC@0,K562@0.0028455,MCF7@0,NHEK@0.0190997,NHLF@0.004729,SKNSHRA@0.016344, 0 0 0 0 ENSG00000254443.1 ENST00000532430.1 chr11:6384029-6386492 2 1286 1175 intergenic 0.36 0 0,0,1 0 0,0,0 0 7.32255319148936 0 0 10.1165957446809 0 0 10.1046808510638 0 0 0 chimp,human,macaque,orangutan,rabbit, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0.001852,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000254443.1 ENST00000531479.1 chr11:6384042-6386497 1 2455 0 intergenic 1.41 0 0,0,1 0 0,0,0 3.50468431771894 0 0 4.84195519348269 0 0 4.83625254582485 0 0 0 0 chimp,cow,dog,elephant,horse,human,macaque,orangutan,rabbit, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0.001852,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000254400.1 ENST00000527191.1 chr11:6624872-6625650 2 397 379 exonic -4.87 0 0,1,1 0 0,0,1 96.3702770780856 56.0738786279683 14.632 196.035264483627 122.427440633245 0.956 204.662468513854 103.89709762533 4.366 0 0 cat,chimp,cow,dog,elephant,guinea_pig,horse,human,macaque,marmoset,mouse,orangutan,panda,rabbit,rat, antisense antisense A549@0.29755,AG04450@0.178011,BJ@0.41517,GM12878@0.268033,H1HESC@0.0594905,HELAS3@0.416124,HEPG2@0.444972,HMEC@0.112884,HSMM@0.156522,HUVEC@0.300924,K562@0.268698,MCF7@0.133631,NHEK@0.0555783,NHLF@0.083079,SKNSHRA@0.080357, 0 0 0 0 ENSG00000254641.1 ENST00000527398.1 chr11:6629897-6631366 3 426 1039 exonic -2.68 0 0,1,1 0 0,0,0 230.361502347418 204.357074109721 430.954 376.410798122066 306.615014436959 484.725 367.460093896714 305.683349374398 493.016 0 0 cat,chimp,cow,dog,elephant,guinea_pig,horse,human,macaque,marmoset,mouse,orangutan,panda,rabbit,rat, processed_transcript processed_transcript A549@0.0765115,AG04450@0,BJ@0,GM12878@0.0170075,H1HESC@0.054602,HELAS3@0.0791345,HEPG2@0.0244535,HMEC@0,HSMM@0.04396,HUVEC@0,K562@0.0756515,MCF7@0.01269,NHEK@0,NHLF@0,SKNSHRA@0.049141, 0 0 0 0 ENSG00000255680.1 ENST00000545572.1 chr11:6640021-6640995 2 462 510 exonic -1.68 0 1,1,1 0 0,0,0 82.2510822510823 104.501960784314 24.216 122.192640692641 145.250980392157 10.622 96.0995670995671 130.254901960784 8.489 0 0 cat,chimp,cow,elephant,horse,human,marmoset,mouse,orangutan,panda,rabbit,rat, antisense antisense A549@0,AG04450@0.0342015,BJ@0.06307,GM12878@0.022892,H1HESC@0.025619,HELAS3@0.00572,HEPG2@0,HMEC@2.63029,HSMM@0.155157,HUVEC@0.0571805,K562@0.005874,MCF7@0,NHEK@0.688489,NHLF@0.0084105,SKNSHRA@0.0467665, 0 0 0 0 ENSG00000255390.1 ENST00000526456.1 chr11:6642682-6643553 2 818 51 exonic 4.24 0 0,1,0 0 0,0,0 527.831295843521 612 51.336 537.090464547677 688 75.648 431.436430317848 535.588235294118 54.724 0 0 cat,chimp,cow,dog,elephant,guinea_pig,horse,human,macaque,marmoset,mouse,opossum,orangutan,panda,rabbit,rat, antisense antisense A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0.021438,HMEC@0.607035,HSMM@0.0091255,HUVEC@0.0032565,K562@0.006648,MCF7@0,NHEK@0.119332,NHLF@0,SKNSHRA@0.0083105, 0 0 0 0 ENSG00000255410.1 ENST00000526633.1 chr11:6651834-6656439 3 484 4117 exonic 0.56 0 0,0,1 0 0,0,0 108.917355371901 251.022589264027 190.067 135.247933884298 308.905756618897 313.036 114.146694214876 252.493320378917 281.63 0 0 cat,chimp,elephant,guinea_pig,horse,human,marmoset,mouse,orangutan,panda, antisense antisense A549@0,AG04450@0,BJ@0.009938,GM12878@0,H1HESC@0.0203245,HELAS3@0,HEPG2@0.00875,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0.004222,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000255179.1 ENST00000534653.1 chr11:7244164-7252094 2 527 7401 intergenic -3.72 0 0,1,0 0 0,0,0 0 14.1651128225915 79.119 0 15.0959329820295 159.282 0 17.399135251993 161.688 0 0 chimp,human,macaque,marmoset,orangutan,panda, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0.0056255,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000251364.2 ENST00000514126.2 chr11:7448497-7461756 4 723 12530 intronic -1.52 0 0,0,1 0 0,0,0 0 6.49082202713488 0 10.6334716459198 7.17861133280128 0 12.6473029045643 9.46711891460495 0 0 0 cat,chimp,cow,dog,elephant,guinea_pig,horse,human,macaque,marmoset,mouse,orangutan,pig,rabbit, antisense antisense A549@0.57174,AG04450@0.0328595,BJ@0.82944,GM12878@3.71964,H1HESC@0.481843,HELAS3@0.165767,HEPG2@0.302584,HMEC@0.101346,HSMM@0.0573695,HUVEC@0.251899,K562@0.085919,MCF7@0.197705,NHEK@0.472723,NHLF@0.323122,SKNSHRA@1.50036, 0 0 0 0 ENSG00000251364.2 ENST00000530846.1 chr11:7448818-7456861 4 624 7413 intronic -1.34 0 0,0,0 0 0,0,0 92.8846153846154 2.20288682045056 7.04 66.2708333333333 2.83879670848509 6.48 84.9791666666667 4.33090516659922 6.672 0 0 cat,chimp,dog,elephant,horse,human,macaque,marmoset,orangutan,panda,rabbit, antisense antisense A549@0.57174,AG04450@0.0328595,BJ@0.82944,GM12878@3.71964,H1HESC@0.481843,HELAS3@0.165767,HEPG2@0.302584,HMEC@0.101346,HSMM@0.0573695,HUVEC@0.251899,K562@0.085919,MCF7@0.197705,NHEK@0.472723,NHLF@0.323122,SKNSHRA@1.50036, 0 0 0 0 ENSG00000251364.2 ENST00000530169.1 chr11:7449177-7487053 5 496 37372 intronic -0.56 0 0,0,0 0 0,0,0 0 12.3415658781976 8.51 6.5 12.7374772556995 19.769 8.81854838709677 14.369126618859 25.361 0 0 chimp,elephant,human,macaque,marmoset,mouse,orangutan,rabbit, antisense antisense A549@0.57174,AG04450@0.0328595,BJ@0.82944,GM12878@3.71964,H1HESC@0.481843,HELAS3@0.165767,HEPG2@0.302584,HMEC@0.101346,HSMM@0.0573695,HUVEC@0.251899,K562@0.085919,MCF7@0.197705,NHEK@0.472723,NHLF@0.323122,SKNSHRA@1.50036, 0 0 0 0 ENSG00000251364.2 ENST00000533693.1 chr11:7456954-7487021 4 500 29561 intronic 4.18 0 0,0,0 0 0,0,0 0 13.0895098271371 5.06 0 14.1014174080714 13.365 0 15.4340177937147 15.375 1 1 chimp,human,macaque,marmoset,orangutan, antisense antisense A549@0.57174,AG04450@0.0328595,BJ@0.82944,GM12878@3.71964,H1HESC@0.481843,HELAS3@0.165767,HEPG2@0.302584,HMEC@0.101346,HSMM@0.0573695,HUVEC@0.251899,K562@0.085919,MCF7@0.197705,NHEK@0.472723,NHLF@0.323122,SKNSHRA@1.50036, 1 96 0 0 ENSG00000251364.2 ENST00000525534.1 chr11:7457059-7461923 2 714 4148 intronic -4.63 0 0,0,0 0 0,0,0 0 1.69720347155256 0 0 7.41923818707811 0 0 9.12849566055931 0 0 0 chimp,dog,elephant,horse,human,macaque,marmoset,orangutan,panda, antisense antisense A549@0.57174,AG04450@0.0328595,BJ@0.82944,GM12878@3.71964,H1HESC@0.481843,HELAS3@0.165767,HEPG2@0.302584,HMEC@0.101346,HSMM@0.0573695,HUVEC@0.251899,K562@0.085919,MCF7@0.197705,NHEK@0.472723,NHLF@0.323122,SKNSHRA@1.50036, 0 0 0 0 ENSG00000251364.2 ENST00000504206.2 chr11:7458858-7482575 4 4429 19282 intronic 1.89 0 0,0,0 0 0,0,0 0 12.1813608546831 13.78 5.48543689320388 13.4333575355254 3.05 7.04289907428313 14.8373612695778 3.09 0 0 chimp,dog,horse,human,marmoset,orangutan, antisense antisense A549@0.57174,AG04450@0.0328595,BJ@0.82944,GM12878@3.71964,H1HESC@0.481843,HELAS3@0.165767,HEPG2@0.302584,HMEC@0.101346,HSMM@0.0573695,HUVEC@0.251899,K562@0.085919,MCF7@0.197705,NHEK@0.472723,NHLF@0.323122,SKNSHRA@1.50036, 0 0 0 0 ENSG00000251364.2 ENST00000526695.1 chr11:7462646-7487061 4 553 23856 intronic 5.13 0 0,0,1 0 0,0,0 0 15.9246730382294 8.51 0 16.1836435278337 23.593 0 17.5377263581489 29.025 0 1 chimp,human,macaque,orangutan, antisense antisense A549@0.57174,AG04450@0.0328595,BJ@0.82944,GM12878@3.71964,H1HESC@0.481843,HELAS3@0.165767,HEPG2@0.302584,HMEC@0.101346,HSMM@0.0573695,HUVEC@0.251899,K562@0.085919,MCF7@0.197705,NHEK@0.472723,NHLF@0.323122,SKNSHRA@1.50036, 0 0 0 0 ENSG00000251364.2 ENST00000526706.1 chr11:7471608-7487066 5 422 15028 intronic 4.95 0 0,0,0 0 0,0,0 0 12.8432925206282 8.51 0 12.2130023955283 25.983 0 13.7113388341762 31.315 0 0 chimp,elephant,human,macaque,marmoset,orangutan, antisense antisense A549@0.57174,AG04450@0.0328595,BJ@0.82944,GM12878@3.71964,H1HESC@0.481843,HELAS3@0.165767,HEPG2@0.302584,HMEC@0.101346,HSMM@0.0573695,HUVEC@0.251899,K562@0.085919,MCF7@0.197705,NHEK@0.472723,NHLF@0.323122,SKNSHRA@1.50036, 0 0 0 0 ENSG00000251364.2 ENST00000533684.1 chr11:7478263-7487005 3 1051 7687 intronic 4.98 0 0,0,0 0 0,0,0 25.8553758325404 18.8653570963965 1.38 10.2226450999049 17.821777026148 6.229 10.5670789724072 20.3395342786523 8.207 0 0 cat,chimp,cow,dog,elephant,guinea_pig,horse,human,macaque,marmoset,orangutan,panda,pig,rabbit, antisense antisense A549@0.57174,AG04450@0.0328595,BJ@0.82944,GM12878@3.71964,H1HESC@0.481843,HELAS3@0.165767,HEPG2@0.302584,HMEC@0.101346,HSMM@0.0573695,HUVEC@0.251899,K562@0.085919,MCF7@0.197705,NHEK@0.472723,NHLF@0.323122,SKNSHRA@1.50036, 0 0 0 0 ENSG00000251364.2 ENST00000530201.1 chr11:7490918-7533746 2 471 42355 encompassing 0 0 0,0,0 0 0,0,0 0 22.1551882894582 90.675 12.7070063694268 21.8178255223704 83.861 13.1634819532909 21.3182623066934 91.705 0 0 cat,chimp,cow,elephant,guinea_pig,horse,human,macaque,marmoset,orangutan,panda,pig,rabbit, antisense antisense A549@0.57174,AG04450@0.0328595,BJ@0.82944,GM12878@3.71964,H1HESC@0.481843,HELAS3@0.165767,HEPG2@0.302584,HMEC@0.101346,HSMM@0.0573695,HUVEC@0.251899,K562@0.085919,MCF7@0.197705,NHEK@0.472723,NHLF@0.323122,SKNSHRA@1.50036, 0 0 0 0 ENSG00000254864.1 ENST00000530963.1 chr11:7590097-7593277 2 548 2630 intronic -0.98 0 0,0,1 0 0,0,0 33.5510948905109 3.54410646387833 47.11 38.470802919708 7.55399239543726 80.321 38.9416058394161 8.91863117870722 79.051 0 0 chimp,horse,human,macaque,orangutan, antisense antisense A549@0.005022,AG04450@0,BJ@0.0088,GM12878@0,H1HESC@0.0108065,HELAS3@0.009651,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0.197369,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000254707.1 ENST00000527443.1 chr11:7726835-7731064 3 536 3689 intronic 2.67 0 0,0,0 0 0,0,0 0 0 0 0 9.63025210084034 38.34 0 10.2876118189211 37.208 0 1 chimp,human,macaque,orangutan, antisense antisense A549@0,AG04450@0.0087385,BJ@0.0405265,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0.0198175,K562@0,MCF7@0,NHEK@0,NHLF@0.0071595,SKNSHRA@0.0455835, 0 0 0 0 ENSG00000254951.2 ENST00000529488.1 chr11:7775940-7904529 6 654 127925 encompassing 2.15 0 0,0,0 0 0,0,0 0 2.75001758843072 0 0 8.13381278092633 0 0 17.1370334180184 0 1 1 chimp,human,macaque,marmoset,orangutan, processed_transcript processed_transcript A549@0,AG04450@0.0519455,BJ@1.59415,GM12878@0.0031825,H1HESC@0.211772,HELAS3@0.014944,HEPG2@0.00109,HMEC@0.116722,HSMM@0.009514,HUVEC@0.0330795,K562@0.005684,MCF7@0.0016065,NHEK@1.47176,NHLF@0.0042625,SKNSHRA@0.0054385, 0 0 0 0 ENSG00000254951.2 ENST00000527847.1 chr11:7872298-7927502 8 2495 52695 intergenic 2.08 0 0,1,1 0 0,0,0 0 0.138817724641807 0 1.53266533066132 5.40482019166904 0 3.57234468937876 6.56160926084069 0 0 1 chimp,human,orangutan, processed_transcript processed_transcript A549@0,AG04450@0.0519455,BJ@1.59415,GM12878@0.0031825,H1HESC@0.211772,HELAS3@0.014944,HEPG2@0.00109,HMEC@0.116722,HSMM@0.009514,HUVEC@0.0330795,K562@0.005684,MCF7@0.0016065,NHEK@1.47176,NHLF@0.0042625,SKNSHRA@0.0054385, 0 0 0 0 ENSG00000254951.2 ENST00000533634.1 chr11:7902528-7904529 3 407 1590 intergenic -3.07 0 0,0,0 0 0,0,0 0 0 0 0 0 0 0 0 0 0 1 chimp,human,macaque,marmoset, processed_transcript processed_transcript A549@0,AG04450@0.0519455,BJ@1.59415,GM12878@0.0031825,H1HESC@0.211772,HELAS3@0.014944,HEPG2@0.00109,HMEC@0.116722,HSMM@0.009514,HUVEC@0.0330795,K562@0.005684,MCF7@0.0016065,NHEK@1.47176,NHLF@0.0042625,SKNSHRA@0.0054385, 0 0 0 0 ENSG00000254951.2 ENST00000502624.2 chr11:7903541-7904464 2 136 785 intergenic 0 0 0,1,0 0 0,0,0 0 0 0 0 0 0 0 0 0 0 0 NA processed_transcript processed_transcript A549@0,AG04450@0.0519455,BJ@1.59415,GM12878@0.0031825,H1HESC@0.211772,HELAS3@0.014944,HEPG2@0.00109,HMEC@0.116722,HSMM@0.009514,HUVEC@0.0330795,K562@0.005684,MCF7@0.0016065,NHEK@1.47176,NHLF@0.0042625,SKNSHRA@0.0054385, 0 0 0 0 ENSG00000255420.1 ENST00000534076.1 chr11:8032825-8038036 3 1560 3647 intergenic 0.41 0 0,1,0 0 0,0,0 0 2.89553057307376 86.12 7.67179487179487 0.45873320537428 7.192 7.91923076923077 1.30408554976693 7.279 0 1 human,marmoset,orangutan, antisense antisense A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0.005309,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000254921.1 ENST00000526646.1 chr11:8056993-8061265 2 813 3457 exonic 6.90 0 0,1,0 1 0,0,0 163.693726937269 38.9840902516633 10.58 89.9692496924969 31.372288111079 2.745 92.4981549815498 27.2554237778421 2.736 0 0 cat,chimp,cow,dog,guinea_pig,horse,human,macaque,marmoset,mouse,orangutan,pig,rabbit,rat, antisense antisense A549@0,AG04450@0,BJ@0,GM12878@0.022261,H1HESC@0.0123835,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0.183482,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000254921.1 ENST00000528151.1 chr11:8060136-8061246 2 595 513 exonic -5.04 0 0,1,0 1 0,0,0 274.248739495798 28.3118908382066 411.21 173.847058823529 35.9551656920078 7.722 166.826890756303 35.2300194931774 9.808 0 0 cat,chimp,cow,dog,guinea_pig,horse,human,macaque,marmoset,mouse,orangutan,panda,pig,rabbit,rat, antisense antisense A549@0,AG04450@0,BJ@0,GM12878@0.022261,H1HESC@0.0123835,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0.183482,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000248332.2 ENST00000530466.1 chr11:8081585-8089487 3 528 7370 intronic 0.32 0 0,1,0 0 0,0,0 151.715909090909 26.8788331071913 3.971 196.003787878788 21.5464043419267 0 156.183712121212 23.2363636363636 0 0 0 cat,cow,horse,human,macaque,marmoset,orangutan,panda,pig,rabbit, sense_intronic sense_intronic A549@0,AG04450@0.0265095,BJ@0.016142,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0.001289,HMEC@0,HSMM@0.0165325,HUVEC@0.0043755,K562@0,MCF7@0,NHEK@0,NHLF@0.001103,SKNSHRA@0.058156, 0 0 0 0 ENSG00000248332.2 ENST00000506601.1 chr11:8081585-8090920 4 2017 7312 intronic 3.60 0 0,1,0 0 0,0,0 52.7783837382251 27.0920404814004 3.971 56.6931085770947 21.7173140043764 0 45.2974714923153 23.4206783369803 0 0 0 horse,human,macaque,marmoset,orangutan,panda, sense_intronic sense_intronic A549@0,AG04450@0.0265095,BJ@0.016142,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0.001289,HMEC@0,HSMM@0.0165325,HUVEC@0.0043755,K562@0,MCF7@0,NHEK@0,NHLF@0.001103,SKNSHRA@0.058156, 0 0 0 0 ENSG00000246820.2 ENST00000499752.2 chr11:8190714-8200450 3 3731 6001 intergenic 10.99 0 0,0,0 0 0,0,0 95.4023050120611 0 26.235 109.958992227285 0.827862022996167 65.725 97.1675154114179 34.4452591234794 73.266 0 0 chimp,dog,horse,human,macaque,marmoset,orangutan,panda, lincRNA processed_transcript A549@0,AG04450@0,BJ@0.0017335,GM12878@0,H1HESC@0.071234,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0.0189445, 0 0 0 0 ENSG00000254900.1 ENST00000534169.1 chr11:8700636-8702460 2 535 1287 intergenic 1.33 0 0,0,0 0 0,0,0 0 0 0 17.6859813084112 13.5874125874126 39.423 18.4654205607477 13.9277389277389 54.086 0 0 chimp,cow,dog,elephant,horse,human,macaque,marmoset,orangutan,panda, antisense antisense A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0.0051785, 0 0 0 0 ENSG00000254665.1 ENST00000529883.1 chr11:8714904-8718154 2 742 2506 exonic 3.70 0 0,1,0 0 0,0,0 359.094339622642 59.7270550678372 15.918 467.699460916442 59.7254588986433 296.328 435.921832884097 56.170790103751 292.252 0 0 chimp,cow,elephant,guinea_pig,horse,human,macaque,marmoset,mouse,opossum,orangutan,pig,rabbit,rat, antisense antisense A549@0.140221,AG04450@0.0672355,BJ@0.035429,GM12878@0.143034,H1HESC@0.20284,HELAS3@0.329211,HEPG2@0.394674,HMEC@0,HSMM@0.107517,HUVEC@0.089338,K562@0.267659,MCF7@0.023101,NHEK@0.051649,NHLF@0.009517,SKNSHRA@0.112883, 0 0 0 0 ENSG00000255159.1 ENST00000532930.1 chr11:8790325-8807318 3 847 16142 intronic -0.39 0 0,0,0 0 0,0,0 4.271546635183 23.4304918845248 0 31.9574970484061 35.0866063684797 7.199 42.4427390791027 36.5932350390286 8.2 0 0 chimp,cow,elephant,horse,human,macaque,orangutan, antisense antisense A549@0,AG04450@0,BJ@0.0028965,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000255159.1 ENST00000533843.1 chr11:8806088-8831776 3 474 25210 intronic -0.41 0 0,0,0 0 0,0,0 27.8523206751055 18.1776675922253 0 65.7510548523207 21.5946449821499 1.912 66.8481012658228 23.6846886156287 1.944 0 0 chimp,horse,human,macaque,orangutan, antisense antisense A549@0,AG04450@0,BJ@0.0028965,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000255159.1 ENST00000527725.1 chr11:8806948-8831778 3 447 24379 intronic -0.70 0 0,0,0 0 0,0,0 29.5346756152125 18.7972845481767 0 58.9194630872483 22.2032897165593 7.936 58.7136465324385 24.3581771196522 8.704 0 0 cat,chimp,dog,guinea_pig,horse,human,macaque,marmoset,orangutan,pig,rabbit, antisense antisense A549@0,AG04450@0,BJ@0.0028965,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000254860.1 ENST00000525484.1 chr11:8986222-8997830 5 1048 10552 exonic 1.26 0 0,0,1 0 0,0,0 6.08778625954198 1.87215693707354 119.079 0 10.2960576194086 67.853 0 11.355193328279 72.978 0 0 chimp,elephant,guinea_pig,horse,human,macaque,marmoset,orangutan,panda, antisense antisense A549@2.53512,AG04450@0.75182,BJ@0.722695,GM12878@0.462368,H1HESC@0.379759,HELAS3@1.87006,HEPG2@1.3237,HMEC@0.100439,HSMM@0.0773585,HUVEC@0.339375,K562@0.601786,MCF7@0.317114,NHEK@0.883529,NHLF@0.67916,SKNSHRA@2.0605, 0 0 0 0 ENSG00000254860.1 ENST00000532599.1 chr11:8986595-8999019 5 610 11806 intergenic 1.26 0 0,1,0 0 0,0,0 0 1.67330171099441 125.459 0 10.0563272912079 67.853 0 11.3600711502626 72.978 0 0 chimp,elephant,horse,human,macaque,marmoset,orangutan,pig, antisense antisense A549@2.53512,AG04450@0.75182,BJ@0.722695,GM12878@0.462368,H1HESC@0.379759,HELAS3@1.87006,HEPG2@1.3237,HMEC@0.100439,HSMM@0.0773585,HUVEC@0.339375,K562@0.601786,MCF7@0.317114,NHEK@0.883529,NHLF@0.67916,SKNSHRA@2.0605, 0 0 0 0 ENSG00000254860.1 ENST00000534349.1 chr11:8988127-8999074 3 380 10563 intergenic 1.26 0 0,0,0 0 0,0,0 0 1.87020732746379 0 0 11.2397046293667 0 0 12.6968664205245 0 0 0 chimp,elephant,horse,human,macaque,marmoset,orangutan,panda, antisense antisense A549@2.53512,AG04450@0.75182,BJ@0.722695,GM12878@0.462368,H1HESC@0.379759,HELAS3@1.87006,HEPG2@1.3237,HMEC@0.100439,HSMM@0.0773585,HUVEC@0.339375,K562@0.601786,MCF7@0.317114,NHEK@0.883529,NHLF@0.67916,SKNSHRA@2.0605, 0 0 0 0 ENSG00000253973.2 ENST00000531592.1 chr11:9025709-9078831 3 557 52561 intronic 0 0 0,1,0 0 0,0,0 8.93177737881508 40.3321474096764 84.669 83.4775583482944 40.3789882232073 129.92 72.2639138240575 43.1364700062784 145.103 0 0 cat,chimp,dog,elephant,guinea_pig,horse,human,macaque,marmoset,mouse,orangutan,panda,pig, antisense antisense A549@0,AG04450@0.010325,BJ@0.006742,GM12878@0,H1HESC@0.009519,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0.0023635, 0 0 0 0 ENSG00000253973.2 ENST00000521394.2 chr11:9078798-9086701 3 957 6942 intronic 2.49 0 0,0,0 0 0,0,0 12.4608150470219 51.6836646499568 116.68 36.3814002089864 49.9783923941227 130.965 37.1222570532915 54.2839239412273 120.504 0 0 chimp,cow,dog,elephant,guinea_pig,horse,human,macaque,orangutan,panda,rabbit, antisense antisense A549@0,AG04450@0.010325,BJ@0.006742,GM12878@0,H1HESC@0.009519,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0.0023635, 0 0 0 0 ENSG00000255097.1 ENST00000528520.1 chr11:9263995-9267056 2 559 2500 intronic -14.73 0 0,1,0 0 0,0,0 0 0 0 0 5.4904 0 0 10.052 0 0 1 chimp,human,macaque, sense_intronic sense_intronic A549@0.0334635,AG04450@0.0192585,BJ@0.011031,GM12878@0.060503,H1HESC@0.0258225,HELAS3@0.071249,HEPG2@0.0235605,HMEC@0,HSMM@0,HUVEC@0.0369605,K562@0.149193,MCF7@0,NHEK@0.0103107,NHLF@0.005743,SKNSHRA@0.047836, 0 0 0 0 ENSG00000254397.1 ENST00000531111.1 chr11:9451903-9455033 2 595 2533 intronic -8.91 0 0,0,0 0 0,0,0 0 25.9692064745361 96.083 0 33.9131464666403 111.007 0 39.3497828661666 118.977 0 0 chimp,elephant,horse,human,macaque,marmoset,orangutan, antisense antisense A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000255180.1 ENST00000529929.1 chr11:9511189-9514557 3 727 2637 intronic -1.56 0 0,1,1 0 0,0,0 0 0 0 0 0 0 0 30.8672734167615 0 0 0 chimp,cow,elephant,human,macaque,marmoset,orangutan, antisense antisense A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0.0063615,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000245522.2 ENST00000500698.1 chr11:9776317-9781080 3 2308 2451 intergenic 1.37 0 1,1,1 0 0,0,0 0 59.8155854753162 85.914 5.17590987868284 38.8669930640555 71.663 5.27816291161179 38.6421868625051 71.265 0 0 chimp,horse,human,marmoset,orangutan, lincRNA processed_transcript A549@0.309455,AG04450@0.48317,BJ@0.558388,GM12878@0.102011,H1HESC@0.071174,HELAS3@0.192997,HEPG2@0.281728,HMEC@0.029057,HSMM@0.731855,HUVEC@0.095075,K562@0.034472,MCF7@0.089003,NHEK@0.257893,NHLF@0.427714,SKNSHRA@0.153871, 0 0 0 0 ENSG00000245522.2 ENST00000525154.1 chr11:9776676-9779711 2 2166 867 intergenic 1.37 0 1,1,1 0 0,0,0 0 0 111.86 5.51523545706371 0 79.643 5.62419205909511 0 78.99 0 0 chimp,horse,human,marmoset,orangutan, lincRNA processed_transcript A549@0.309455,AG04450@0.48317,BJ@0.558388,GM12878@0.102011,H1HESC@0.071174,HELAS3@0.192997,HEPG2@0.281728,HMEC@0.029057,HSMM@0.731855,HUVEC@0.095075,K562@0.034472,MCF7@0.089003,NHEK@0.257893,NHLF@0.427714,SKNSHRA@0.153871, 0 0 0 0 ENSG00000246273.2 ENST00000498905.2 chr11:9779839-9832866 3 2706 50317 exonic 1.65 0 0,1,0 1 0,0,0 52.1585365853659 35.5969354293778 0 66.8133776792314 35.8535286284953 8.976 69.6633407243163 39.9919907784645 8.784 0 0 chimp,guinea_pig,human,macaque,marmoset,orangutan, lincRNA processed_transcript A549@2.85656,AG04450@16.2685,BJ@7.10849,GM12878@0.605241,H1HESC@0.419477,HELAS3@4.20866,HEPG2@1.8596,HMEC@0.188411,HSMM@8.23045,HUVEC@0.206238,K562@1.14752,MCF7@0.94226,NHEK@0.844375,NHLF@6.93529,SKNSHRA@1.02812, 0 0 0 0 ENSG00000246273.2 ENST00000527406.1 chr11:9779841-9802378 2 664 21871 exonic -3.33 0 0,1,0 1 0,0,0 74.9638554216867 33.6368250194321 0 95.0376506024096 26.3331352018655 8.976 101.760542168675 36.664670111106 8.784 0 0 chimp,cow,elephant,human,macaque,marmoset,orangutan,panda,pig,rabbit, lincRNA processed_transcript A549@2.85656,AG04450@16.2685,BJ@7.10849,GM12878@0.605241,H1HESC@0.419477,HELAS3@4.20866,HEPG2@1.8596,HMEC@0.188411,HSMM@8.23045,HUVEC@0.206238,K562@1.14752,MCF7@0.94226,NHEK@0.844375,NHLF@6.93529,SKNSHRA@1.02812, 0 0 0 0 ENSG00000246273.2 ENST00000499953.2 chr11:9779843-9812791 4 850 32092 exonic 0.93 1 1,1,1 1 0,0,0 83.8129411764706 37.1072229839212 0 84.9070588235294 34.6395051726287 8.976 95.2435294117647 43.3392745855665 8.784 0 0 chimp,dog,elephant,guinea_pig,horse,human,macaque,marmoset,mouse,orangutan,panda,pig, lincRNA processed_transcript A549@2.85656,AG04450@16.2685,BJ@7.10849,GM12878@0.605241,H1HESC@0.419477,HELAS3@4.20866,HEPG2@1.8596,HMEC@0.188411,HSMM@8.23045,HUVEC@0.206238,K562@1.14752,MCF7@0.94226,NHEK@0.844375,NHLF@6.93529,SKNSHRA@1.02812, 0 0 0 0 ENSG00000246273.2 ENST00000525636.1 chr11:9797192-9829585 4 634 31753 exonic 0.38 0 0,0,0 0 0,0,0 127.794952681388 43.2681321449942 0 146.255520504732 44.8378420936605 3.472 155 45.9217711712279 3.514 0 0 cat,chimp,cow,dog,elephant,horse,human,macaque,marmoset,mouse,orangutan,pig,rat, lincRNA processed_transcript A549@2.85656,AG04450@16.2685,BJ@7.10849,GM12878@0.605241,H1HESC@0.419477,HELAS3@4.20866,HEPG2@1.8596,HMEC@0.188411,HSMM@8.23045,HUVEC@0.206238,K562@1.14752,MCF7@0.94226,NHEK@0.844375,NHLF@6.93529,SKNSHRA@1.02812, 0 0 0 0 ENSG00000246273.2 ENST00000534671.1 chr11:9797278-9829926 3 764 31880 exonic -5.22 1 1,1,1 0 0,0,0 197.057591623037 43.3234943538268 0 233.107329842932 44.9452007528231 3.472 240.141361256545 45.8662484316186 3.514 0 0 cat,chimp,cow,dog,elephant,horse,human,macaque,marmoset,mouse,orangutan,panda,pig,platypus,rabbit,rat, lincRNA processed_transcript A549@2.85656,AG04450@16.2685,BJ@7.10849,GM12878@0.605241,H1HESC@0.419477,HELAS3@4.20866,HEPG2@1.8596,HMEC@0.188411,HSMM@8.23045,HUVEC@0.206238,K562@1.14752,MCF7@0.94226,NHEK@0.844375,NHLF@6.93529,SKNSHRA@1.02812, 0 0 0 0 ENSG00000246273.2 ENST00000526617.1 chr11:9806698-9812784 2 486 5598 exonic 0.93 1 0,0,1 0 0,0,0 132.545267489712 48.9167559842801 64.564 82.6481481481482 446.092711682744 54.129 106.244855967078 548.709539121115 65.169 0 0 cat,chimp,cow,dog,elephant,guinea_pig,horse,human,macaque,marmoset,mouse,orangutan,panda,pig, lincRNA processed_transcript A549@2.85656,AG04450@16.2685,BJ@7.10849,GM12878@0.605241,H1HESC@0.419477,HELAS3@4.20866,HEPG2@1.8596,HMEC@0.188411,HSMM@8.23045,HUVEC@0.206238,K562@1.14752,MCF7@0.94226,NHEK@0.844375,NHLF@6.93529,SKNSHRA@1.02812, 0 0 0 0 ENSG00000255476.1 ENST00000533659.1 chr11:9860690-9950810 3 583 89533 intronic -4.35 0 0,0,0 0 0,0,0 0 18.1959724347447 0 0 25.3153474138027 5.512 0 26.2208682832028 14.181 0 0 chimp,dog,human,marmoset,orangutan, antisense antisense A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0.0186925,HUVEC@0,K562@0,MCF7@0,NHEK@0.00901167,NHLF@0,SKNSHRA@0, 25 4 0 0 ENSG00000254865.1 ENST00000532735.1 chr11:10170739-10186656 2 520 15395 intronic 0.92 0 0,0,0 0 0,0,0 0 3.34952906787918 0 0 8.1194543683014 8.925 0 8.33354985384865 9.52 0 0 chimp,dog,horse,human, antisense antisense A549@0.0059465,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0.0159925,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0.0036965,SKNSHRA@0, 0 0 0 0 ENSG00000254554.1 ENST00000526906.1 chr11:10324204-10325251 2 801 244 intergenic 2.45 0 0,1,0 1 0,0,0 14.0699126092385 0 17.873 32.0536828963795 0 72.049 32.0886392009988 0 69.896 0 0 chimp,cow,dog,elephant,horse,human,macaque,marmoset,mouse,orangutan,panda,pig,rabbit, antisense antisense A549@1.1197,AG04450@1.20565,BJ@2.44039,GM12878@0.0132275,H1HESC@1.48405,HELAS3@2.22318,HEPG2@1.65354,HMEC@0.367377,HSMM@0.049432,HUVEC@0.121602,K562@0,MCF7@0.159966,NHEK@0.455683,NHLF@0.881596,SKNSHRA@0.350455, 0 0 0 0 ENSG00000177112.3 ENST00000529829.1 chr11:10562819-10621479 3 584 58072 exonic 5.16 1 1,1,1 1 0,1,0 49.9109589041096 17.943862791018 0 45.3630136986301 25.6334550213528 24.387 53.7260273972603 25.0917137346742 26.144 0 0 cat,chimp,dog,elephant,horse,human,macaque,marmoset,mouse,orangutan,rabbit, antisense antisense A549@0.0564885,AG04450@0.010117,BJ@0.0083885,GM12878@0,H1HESC@0.049097,HELAS3@0.0116325,HEPG2@0,HMEC@0.013951,HSMM@0.0296825,HUVEC@0.0434675,K562@0.0545195,MCF7@0.0052295,NHEK@0.0618257,NHLF@0.0131485,SKNSHRA@0.100685, 0 0 0 0 ENSG00000177112.3 ENST00000529979.1 chr11:10562844-10621424 5 779 57793 exonic 2.71 1 1,1,1 1 0,1,0 54.5738125802311 17.7922239717613 0 40.9050064184852 25.6539027217829 24.387 60.5186136071887 24.9299050057965 26.144 0 0 cat,chimp,dog,horse,human,macaque,marmoset,orangutan, antisense antisense A549@0.0564885,AG04450@0.010117,BJ@0.0083885,GM12878@0,H1HESC@0.049097,HELAS3@0.0116325,HEPG2@0,HMEC@0.013951,HSMM@0.0296825,HUVEC@0.0434675,K562@0.0545195,MCF7@0.0052295,NHEK@0.0618257,NHLF@0.0131485,SKNSHRA@0.100685, 0 0 0 0 ENSG00000177112.3 ENST00000525578.1 chr11:10614744-10621453 5 824 5877 exonic 2.84 1 0,0,1 0 0,1,0 42.3264563106796 27.8392036753446 0 41.1043689320388 34.5496001361239 4.239 47.8980582524272 37.725370086779 2.849 0 0 cat,chimp,cow,dog,horse,human,macaque,marmoset,orangutan,panda, antisense antisense A549@0.0564885,AG04450@0.010117,BJ@0.0083885,GM12878@0,H1HESC@0.049097,HELAS3@0.0116325,HEPG2@0,HMEC@0.013951,HSMM@0.0296825,HUVEC@0.0434675,K562@0.0545195,MCF7@0.0052295,NHEK@0.0618257,NHLF@0.0131485,SKNSHRA@0.100685, 0 0 0 0 ENSG00000255125.1 ENST00000532365.1 chr11:10804860-10823172 3 438 17870 intronic 0.28 0 0,1,1 0 0,0,0 101.461187214612 62.9020145495244 0 196.557077625571 89.870789031897 0 169.835616438356 95.0348069390039 0 0 0 chimp,dog,horse,human,macaque,marmoset,orangutan,pig, antisense antisense A549@0,AG04450@0.010165,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0.0046625,NHEK@0.125473,NHLF@0,SKNSHRA@0.048793, 0 0 0 0 ENSG00000246308.1 ENST00000499765.1 chr11:10830844-10844478 3 2332 11298 intergenic -5.02 0 0,1,0 0 0,0,0 0 0.776951672862453 275.91 0 8.22039298990972 264.999 1.04202401372213 12.3375818728979 270.292 1 1 chimp,human,macaque,marmoset,orangutan, lincRNA processed_transcript A549@0.0921285,AG04450@0.04699,BJ@0.0548625,GM12878@0.124291,H1HESC@0.14723,HELAS3@0.183525,HEPG2@0.102504,HMEC@0.010522,HSMM@0.011836,HUVEC@0.031563,K562@0.082601,MCF7@0.061052,NHEK@0.011041,NHLF@0.0427795,SKNSHRA@0.102739, 0 0 0 0 ENSG00000247271.2 ENST00000501079.1 chr11:10879806-10900823 3 1068 19945 exonic -5.06 0 1,1,1 1 0,0,0 0 5.03955878666332 123.102 0 11.7876660817247 92.695 0 22.5186262221108 95.134 0 1 chimp,human,macaque,orangutan, lincRNA processed_transcript A549@6.40611,AG04450@2.17952,BJ@1.3615,GM12878@2.51987,H1HESC@1.11934,HELAS3@1.70477,HEPG2@1.82477,HMEC@3.56363,HSMM@2.05573,HUVEC@2.26401,K562@2.10061,MCF7@1.60448,NHEK@5.89197,NHLF@2.16594,SKNSHRA@7.30656, 0 0 0 0 ENSG00000247271.2 ENST00000529014.1 chr11:10879815-10899956 3 768 19369 exonic -1.13 0 0,1,0 1 0,0,0 0 5.18942640301513 123.102 0 12.1382105426196 92.695 0 23.1882905674015 95.134 0 0 chimp,elephant,human,macaque,marmoset,orangutan, lincRNA processed_transcript A549@6.40611,AG04450@2.17952,BJ@1.3615,GM12878@2.51987,H1HESC@1.11934,HELAS3@1.70477,HEPG2@1.82477,HMEC@3.56363,HSMM@2.05573,HUVEC@2.26401,K562@2.10061,MCF7@1.60448,NHEK@5.89197,NHLF@2.16594,SKNSHRA@7.30656, 0 0 0 0 ENSG00000247271.2 ENST00000530344.1 chr11:10886808-10928349 2 413 41126 intergenic -2.32 0 0,1,0 0 0,0,0 31.4285714285714 12.875674755629 29.545 0 16.6773817050041 140.677 0 22.1111705490444 155.37 0 0 cat,chimp,cow,dog,elephant,guinea_pig,horse,human,macaque,marmoset,orangutan, lincRNA processed_transcript A549@6.40611,AG04450@2.17952,BJ@1.3615,GM12878@2.51987,H1HESC@1.11934,HELAS3@1.70477,HEPG2@1.82477,HMEC@3.56363,HSMM@2.05573,HUVEC@2.26401,K562@2.10061,MCF7@1.60448,NHEK@5.89197,NHLF@2.16594,SKNSHRA@7.30656, 0 0 0 0 ENSG00000250041.2 ENST00000503469.2 chr11:10906432-10920869 2 429 14006 intergenic -2.23 0 0,1,0 0 0,0,0 42.8904428904429 15.3399257461088 102.525 110.771561771562 21.3736969870056 138.463 110.806526806527 22.0354133942596 129.121 0 1 chimp,human,macaque,orangutan, lincRNA processed_transcript A549@0.173005,AG04450@0.397125,BJ@0.0460235,GM12878@0.0254695,H1HESC@0,HELAS3@0.036463,HEPG2@0.043354,HMEC@0.217613,HSMM@0.541908,HUVEC@0,K562@0.0971455,MCF7@0.0791585,NHEK@0.353847,NHLF@0.659739,SKNSHRA@0.13029, 0 0 0 0 ENSG00000250041.2 ENST00000533941.1 chr11:10918050-10920719 2 555 2112 intergenic -1.30 0 0,0,0 0 0,0,0 4.14414414414414 0 118.395 7.09189189189189 2.98295454545455 177.973 7.34594594594595 3.02746212121212 168.596 0 0 cat,chimp,dog,guinea_pig,horse,human,macaque,marmoset,orangutan,panda, lincRNA processed_transcript A549@0.173005,AG04450@0.397125,BJ@0.0460235,GM12878@0.0254695,H1HESC@0,HELAS3@0.036463,HEPG2@0.043354,HMEC@0.217613,HSMM@0.541908,HUVEC@0,K562@0.0971455,MCF7@0.0791585,NHEK@0.353847,NHLF@0.659739,SKNSHRA@0.13029, 0 0 0 0 ENSG00000254401.1 ENST00000525758.1 chr11:11139401-11205158 7 1826 63919 intergenic 4.19 1 0,0,0 0 0,0,0 0 9.64262582330762 0 0 15.5514009918803 0 14.4414019715225 27.6047966958181 0 1 1 chimp,human,macaque,marmoset,orangutan, processed_transcript processed_transcript A549@0.0103795,AG04450@0.001759,BJ@0.001343,GM12878@0.002782,H1HESC@0.0058755,HELAS3@0,HEPG2@0,HMEC@0.002234,HSMM@0,HUVEC@0.0013265,K562@0.001795,MCF7@0,NHEK@0.005349,NHLF@0.0121435,SKNSHRA@0.0425895, 0 0 0 0 ENSG00000255260.1 ENST00000524855.1 chr11:11264735-11265262 2 424 101 intergenic 0.11 0 0,0,0 0 0,0,0 0 0 43.206 0 0 67.606 0 0 66.029 0 0 cow,horse,human,macaque,marmoset,orangutan,panda,rabbit, lincRNA lincRNA A549@0.010191,AG04450@0,BJ@0,GM12878@0.0110045,H1HESC@0.0535575,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0.005351,HUVEC@0,K562@0,MCF7@0.009653,NHEK@0.00599333,NHLF@0.0091605,SKNSHRA@0, 0 0 0 0 ENSG00000255351.1 ENST00000526867.1 chr11:11373973-11374854 2 592 287 intronic -1.19 0 0,0,1 0 0,0,0 559 559 363.35 61.9037162162162 109.634146341463 80.715 513.295608108108 702 324.174 0 0 cat,chimp,dog,elephant,guinea_pig,human,macaque,mouse,panda,rabbit,rat, antisense antisense A549@0.789157,AG04450@0.441708,BJ@0.337662,GM12878@0.132106,H1HESC@0.074839,HELAS3@0.0851245,HEPG2@0.072725,HMEC@0,HSMM@0.006928,HUVEC@0,K562@0.24325,MCF7@0.006846,NHEK@0.153677,NHLF@0.003285,SKNSHRA@0.234891, 0 0 0 0 ENSG00000255462.1 ENST00000527726.1 chr11:11591631-11595329 2 370 3326 intronic 5.83 0 1,1,1 0 0,0,0 0 7.48346361996392 0 0 10.3866506313891 16.674 0 14.0183403487673 17.248 0 0 chimp,dog,human,macaque,marmoset,orangutan,panda, antisense antisense A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0.143092,HSMM@0,HUVEC@0.016,K562@0,MCF7@0,NHEK@0.52237,NHLF@0.0313545,SKNSHRA@0, 0 0 0 0 ENSG00000254486.1 ENST00000531559.1 chr11:12052422-12083332 2 3306 27602 intergenic 7.62 0 0,0,0 0 0,0,0 0 2.84414172886023 0 1.69691470054446 5.28287805231505 0 2.22141560798548 8.14361278168249 0 1 1 chimp,human,macaque,marmoset,orangutan, lincRNA lincRNA A549@0.0059645,AG04450@0.001424,BJ@0,GM12878@0.003543,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0.101208,K562@0.001485,MCF7@0.002486,NHEK@0.00990233,NHLF@0.007026,SKNSHRA@0.0082375, 0 0 0 0 ENSG00000254991.1 ENST00000476130.2 chr11:12088476-12094561 2 897 5186 intergenic -6.43 0 0,0,0 0 0,0,0 24.2073578595318 13.7680293096799 0 14.6744704570792 17.4838025453143 0 14.5562987736901 18.9371384496722 0 1 1 chimp,human,macaque,marmoset,orangutan, lincRNA lincRNA A549@0.713378,AG04450@0.034517,BJ@0.0190765,GM12878@0.0044845,H1HESC@0.0078125,HELAS3@0.0715215,HEPG2@0.052049,HMEC@0.214068,HSMM@0,HUVEC@0.095028,K562@0,MCF7@0.022668,NHEK@0.215529,NHLF@0.004341,SKNSHRA@0.0151685, 0 0 0 0 ENSG00000255400.1 ENST00000527997.1 chr11:12108438-12110988 2 548 2000 intergenic -1.79 0 1,1,1 0 0,0,0 9.53649635036496 0 82.194 23.1149635036496 1.7 132.698 22.3266423357664 1.7595 138.4 0 0 chimp,cow,dog,guinea_pig,horse,human,macaque,marmoset,orangutan,rabbit, lincRNA lincRNA A549@2.13099,AG04450@0.878196,BJ@3.48642,GM12878@0,H1HESC@0,HELAS3@0.022768,HEPG2@0,HMEC@0.178675,HSMM@0.058025,HUVEC@1.38243,K562@0,MCF7@0,NHEK@1.78937,NHLF@0.723208,SKNSHRA@0.114724, 0 0 0 0 ENSG00000254680.1 ENST00000527288.1 chr11:12282973-12284720 2 498 1247 exonic -1.72 0 0,1,0 0 0,0,0 0 28.6615878107458 181.132 0 98.5685645549318 209.169 0 89.6832397754611 177.687 0 0 cat,chimp,cow,elephant,guinea_pig,horse,human,macaque,marmoset,mouse,orangutan,panda,rat, antisense antisense A549@0.006208,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0.0468775,HMEC@0,HSMM@0,HUVEC@0,K562@0.0207265,MCF7@0.0061395,NHEK@0,NHLF@0,SKNSHRA@0.009091, 0 0 0 0 ENSG00000254983.1 ENST00000526616.1 chr11:12325080-12329763 2 382 4299 intronic -15.01 0 0,0,0 0 0,0,0 0 0 0 29.8638743455497 0 0 45.3507853403141 3.38636892300535 42.6 0 0 NA sense_intronic sense_intronic A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@2.19513,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0.155897,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000254847.1 ENST00000526112.1 chr11:12559630-12562514 2 517 2365 intergenic -3.19 0 0,0,0 0 0,0,0 0 0 33.166 0 1.04862579281184 41.598 0 1.88329809725159 40.812 0 0 chimp,cow,dog,horse,human,macaque,marmoset,orangutan,panda,pig,rabbit, lincRNA lincRNA A549@0.010644,AG04450@0.095575,BJ@0.0675515,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0.012321,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0.0187975,SKNSHRA@0.0087585, 0 0 0 0 ENSG00000254688.1 ENST00000526953.1 chr11:12843982-12845214 2 487 743 intronic -5.50 0 0,0,0 0 0,0,0 0 48.5598923283984 91.74 0 45.4885598923284 3.841 0 60.5612382234186 7.555 0 0 chimp,cow,elephant,guinea_pig,horse,human,macaque,marmoset,orangutan,panda, antisense antisense A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0.0042425,HELAS3@0,HEPG2@0.0190625,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000255067.1 ENST00000528792.1 chr11:12870342-12870980 2 417 219 intronic -10.76 0 0,0,0 0 0,0,0 0 0 0 0 0 1.434 0 0 3.765 0 1 chimp,human,macaque,orangutan, sense_intronic sense_intronic A549@0.0622825,AG04450@0.076408,BJ@0.101326,GM12878@0,H1HESC@0.0378245,HELAS3@0.1186,HEPG2@0.147558,HMEC@0,HSMM@0.186756,HUVEC@0.0907895,K562@0.007024,MCF7@0.071352,NHEK@0.0596807,NHLF@0.0923785,SKNSHRA@0.091115, 1 96 0 0 ENSG00000203258.3 ENST00000454086.2 chr11:12942733-12944472 2 564 1173 intronic -6.36 0 0,1,0 0 0,0,0 0 0 0 0 13.1440750213129 0 0 17.2020460358056 0 1 1 chimp,human,macaque,marmoset,orangutan, antisense antisense A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0.0096385,HMEC@0,HSMM@0.158647,HUVEC@0.009436,K562@0.158023,MCF7@0,NHEK@0.011549,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000251381.2 ENST00000527945.1 chr11:12984057-13011094 3 450 26583 intergenic 0.68 0 1,1,1 0 0,0,0 0 3.53763683557161 0 0 11.999661437761 0 0 12.9942444419366 0 0 1 chimp,human,marmoset,orangutan, lincRNA processed_transcript A549@0.034572,AG04450@0,BJ@0,GM12878@0.27984,H1HESC@0.0423955,HELAS3@6.02011,HEPG2@3.29793,HMEC@0.015353,HSMM@0,HUVEC@0.056874,K562@20.1136,MCF7@0,NHEK@4.75837,NHLF@0.0086145,SKNSHRA@0.0039185, 0 0 0 0 ENSG00000251381.2 ENST00000504230.2 chr11:13001082-13011095 2 1556 8455 intergenic 3.59 1 1,1,1 0 0,0,0 6.53470437017995 0 0 6.07647814910026 2.80224719101124 0 8.22750642673522 3.0561797752809 0 1 1 chimp,human,macaque,marmoset,orangutan, lincRNA processed_transcript A549@0.034572,AG04450@0,BJ@0,GM12878@0.27984,H1HESC@0.0423955,HELAS3@6.02011,HEPG2@3.29793,HMEC@0.015353,HSMM@0,HUVEC@0.056874,K562@20.1136,MCF7@0,NHEK@4.75837,NHLF@0.0086145,SKNSHRA@0.0039185, 0 0 0 0 ENSG00000251381.2 ENST00000532541.1 chr11:13001585-13011084 4 1120 8373 intergenic 3.59 0 1,1,1 0 0,0,0 6.64285714285714 0.296190134957602 0 15.9705357142857 1.79302520004777 0 19.6875 1.94912217843067 0 0 0 chimp,elephant,human,macaque,marmoset,orangutan, lincRNA processed_transcript A549@0.034572,AG04450@0,BJ@0,GM12878@0.27984,H1HESC@0.0423955,HELAS3@6.02011,HEPG2@3.29793,HMEC@0.015353,HSMM@0,HUVEC@0.056874,K562@20.1136,MCF7@0,NHEK@4.75837,NHLF@0.0086145,SKNSHRA@0.0039185, 0 0 0 0 ENSG00000251381.2 ENST00000534477.1 chr11:13001758-13011086 3 885 8439 intergenic 3.59 0 0,1,0 0 0,0,0 8.40677966101695 0.293873681715843 0 20.2112994350282 1.77900225145159 0 24.9152542372881 1.93387842161394 0 0 0 chimp,elephant,human,macaque,marmoset,orangutan, lincRNA processed_transcript A549@0.034572,AG04450@0,BJ@0,GM12878@0.27984,H1HESC@0.0423955,HELAS3@6.02011,HEPG2@3.29793,HMEC@0.015353,HSMM@0,HUVEC@0.056874,K562@20.1136,MCF7@0,NHEK@4.75837,NHLF@0.0086145,SKNSHRA@0.0039185, 0 0 0 0 ENSG00000251381.2 ENST00000529328.1 chr11:13002034-13005839 2 578 3225 intergenic 3.59 0 0,0,1 0 0,0,0 17.5916955017301 0 0 0 0 0 0 0 0 0 0 chimp,elephant,horse,human,macaque,marmoset,orangutan, lincRNA processed_transcript A549@0.034572,AG04450@0,BJ@0,GM12878@0.27984,H1HESC@0.0423955,HELAS3@6.02011,HEPG2@3.29793,HMEC@0.015353,HSMM@0,HUVEC@0.056874,K562@20.1136,MCF7@0,NHEK@4.75837,NHLF@0.0086145,SKNSHRA@0.0039185, 0 0 0 0 ENSG00000251381.2 ENST00000531402.1 chr11:13002176-13011093 4 586 8325 intergenic 3.59 0 0,1,0 0 0,0,0 12.6962457337884 0.297897897897898 0 14.3890784982935 1.80336336336336 0 15.7815699658703 1.96036036036036 0 0 0 chimp,horse,human,macaque,marmoset,orangutan, lincRNA processed_transcript A549@0.034572,AG04450@0,BJ@0,GM12878@0.27984,H1HESC@0.0423955,HELAS3@6.02011,HEPG2@3.29793,HMEC@0.015353,HSMM@0,HUVEC@0.056874,K562@20.1136,MCF7@0,NHEK@4.75837,NHLF@0.0086145,SKNSHRA@0.0039185, 0 0 0 0 ENSG00000251381.2 ENST00000526388.1 chr11:13002216-13011085 5 602 8259 intergenic 3.59 0 0,1,0 0 0,0,0 12.358803986711 0.300278484077976 0 14.0066445182724 1.81777454897687 0 15.3621262458472 1.97602615328732 0 0 0 chimp,horse,human,macaque,orangutan,rabbit, lincRNA processed_transcript A549@0.034572,AG04450@0,BJ@0,GM12878@0.27984,H1HESC@0.0423955,HELAS3@6.02011,HEPG2@3.29793,HMEC@0.015353,HSMM@0,HUVEC@0.056874,K562@20.1136,MCF7@0,NHEK@4.75837,NHLF@0.0086145,SKNSHRA@0.0039185, 0 0 0 0 ENSG00000254670.1 ENST00000533002.1 chr11:13022637-13030706 2 668 7399 intergenic 3.84 0 0,1,0 0 0,0,0 0 4.29341802946344 269.82 0 3.52236788755237 339.44 0 5.60251385322341 351.765 0 0 chimp,cow,elephant,guinea_pig,horse,human,macaque,marmoset,orangutan,rabbit, lincRNA lincRNA A549@0.314478,AG04450@0,BJ@0,GM12878@0.0078635,H1HESC@0.988296,HELAS3@0,HEPG2@0,HMEC@0.470576,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0.702459,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000255558.1 ENST00000531136.1 chr11:13076162-13156386 2 465 79757 intergenic -3.25 0 0,0,0 0 0,0,0 0 5.33659741464699 23.183 0 10.3981719472899 15.96 0 11.7729102147774 18.461 0 0 chimp,horse,human,macaque,marmoset,orangutan, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0.0172665,H1HESC@0,HELAS3@1.04818,HEPG2@0.093456,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0.016962,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000254791.1 ENST00000525233.1 chr11:13690874-13691696 2 366 454 intronic 0 0 0,1,0 0 0,0,0 0 0 37.72 5.03005464480874 0 90.423 4.80054644808743 0 81.068 0 0 chimp,cow,elephant,guinea_pig,horse,human,macaque,marmoset,mouse,orangutan,panda,pig,rabbit,rat, sense_intronic sense_intronic A549@0.231131,AG04450@0.084359,BJ@0.0831045,GM12878@0.182598,H1HESC@0.0125915,HELAS3@0.071236,HEPG2@0.008177,HMEC@0.01383,HSMM@0.019841,HUVEC@0.0437315,K562@0.727131,MCF7@0.0492275,NHEK@0.0196677,NHLF@0.0120185,SKNSHRA@0.189333, 0 0 0 0 ENSG00000255411.1 ENST00000531749.1 chr11:13806937-13869549 3 481 62127 intergenic 4.76 0 0,0,0 0 0,0,0 0 6.87942440484813 18.961 20.2411642411642 13.1825776232556 0 21.1995841995842 15.0301962109872 0 0 0 cat,chimp,cow,dog,elephant,horse,human,macaque,orangutan,panda,pig,rabbit, lincRNA lincRNA A549@0,AG04450@0,BJ@0.0099995,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000254927.1 ENST00000530492.1 chr11:13848390-13901046 2 514 52140 intergenic -14.30 0 0,0,0 0 0,0,0 0 23.9030111238972 0 0 22.8762754123514 7.654 0 23.909666283084 7.846 0 0 chimp,horse,human,macaque,marmoset,orangutan,panda, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000254930.1 ENST00000525381.1 chr11:13866409-13892163 4 302 25446 intergenic 0 0 0,1,1 0 0,0,0 2.55298013245033 33.1096046529906 0 0 27.5676727186984 0 0 28.7410201996384 0 0 0 cat,chimp,dog,elephant,horse,human,macaque,marmoset,orangutan, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000254438.1 ENST00000532065.1 chr11:13942997-13946410 2 682 2729 intergenic -1.40 0 0,0,0 0 0,0,0 149.420821114369 129.261634298278 0 102.013196480938 117.408574569439 38.221 101.604105571847 117.806888970319 40.395 0 0 chimp,cow,horse,human,macaque,marmoset,mouse,orangutan,panda,pig,rabbit, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0.0060655,HELAS3@0.0155205,HEPG2@0,HMEC@0.005986,HSMM@0,HUVEC@0.0304565,K562@0,MCF7@0,NHEK@0.0113927,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000254418.1 ENST00000534587.1 chr11:14284392-14295237 2 238 10605 exonic 0 0 0,0,0 0 0,0,0 285.558823529412 33.0050919377652 0 240.147058823529 32.2237623762376 5.298 247.563025210084 33.7319189061763 8.56 0 0 chimp,cow,dog,elephant,guinea_pig,horse,human,macaque,marmoset,mouse,orangutan,panda,rabbit,rat, antisense antisense A549@0.131416,AG04450@0.285859,BJ@0.816809,GM12878@0.279307,H1HESC@0.252173,HELAS3@0.256205,HEPG2@0.542733,HMEC@0.119427,HSMM@0.238804,HUVEC@0.477276,K562@0.08056,MCF7@0.198656,NHEK@0.381093,NHLF@0.537027,SKNSHRA@0.326676, 0 0 0 0 ENSG00000254946.1 ENST00000527770.1 chr11:15574401-15612644 5 566 37669 intergenic 2.45 0 0,0,0 0 0,0,0 0 39.2317821019937 0 0 43.1029759218456 12.428 0 42.212960259099 13.468 0 1 chimp,human,marmoset,orangutan, lincRNA lincRNA A549@0.0279885,AG04450@0,BJ@0,GM12878@0.0293925,H1HESC@2.999,HELAS3@0.059042,HEPG2@0.0525485,HMEC@0,HSMM@0,HUVEC@0,K562@0.0043015,MCF7@0.0072015,NHEK@0,NHLF@0,SKNSHRA@0.024758, 0 0 0 0 ENSG00000254789.1 ENST00000533082.1 chr11:15593569-15643937 2 463 49903 intergenic -9.19 0 0,0,1 0 0,0,0 84.7710583153348 56.1093521431577 266.771 58.4708423326134 56.1319960723804 342.822 44.0669546436285 53.8039196040318 324.563 0 0 chimp,dog,guinea_pig,horse,human,macaque,marmoset,orangutan,panda,rabbit, lincRNA lincRNA A549@0.007253,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0.0164475, 0 0 0 0 ENSG00000254695.1 ENST00000532242.1 chr11:15665431-15726914 3 468 61011 intergenic 0.84 0 0,1,1 0 0,0,0 24.3846153846154 31.0087525200374 0 50.2564102564103 33.7363754077134 0 18.3653846153846 34.2934880595302 0 0 0 cat,chimp,cow,horse,human,macaque,marmoset,orangutan,panda,rabbit, lincRNA lincRNA A549@0.0046085,AG04450@0,BJ@0,GM12878@0,H1HESC@0.0176175,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0.009634, 0 0 0 0 ENSG00000254645.1 ENST00000524613.1 chr11:15723509-15780444 9 984 55935 intergenic 2.16 0 0,0,0 0 0,0,0 106.80487804878 33.7407705372307 423.168 104.826219512195 36.5608652900688 336.514 98.0711382113821 37.3998748547421 323.045 0 0 chimp,horse,human,macaque,marmoset,mouse,orangutan, lincRNA lincRNA A549@0,AG04450@0.05347,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0.00393,SKNSHRA@0, 0 0 0 0 ENSG00000254661.1 ENST00000528194.1 chr11:15932495-15940087 3 543 7045 intergenic 1.94 0 0,0,0 0 0,0,0 150.497237569061 15.4685592618879 221.892 120.110497237569 25.4975159687722 193.477 129.473296500921 24.9088715400994 184.36 0 0 cow,dog,guinea_pig,horse,human,macaque,marmoset,orangutan,panda,pig,rabbit,rat, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000254661.1 ENST00000530418.1 chr11:15932503-15948989 4 524 15956 intergenic 2.18 0 0,0,0 0 0,0,0 0 14.2819002256205 221.892 3.40648854961832 17.4368889445976 193.477 3.54007633587786 18.5345951366257 184.36 0 0 cat,dog,horse,human,macaque,marmoset,orangutan,panda, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000254878.1 ENST00000531763.1 chr11:16044736-16053061 2 195 8128 intronic 0 0 0,1,0 0 0,0,0 0 73.2514763779528 0 0 85.171875 3 0 93.7892470472441 5.871 0 0 chimp,human,macaque,orangutan,pig, antisense antisense A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000254586.1 ENST00000524885.1 chr11:17716569-17719018 3 599 1846 intergenic -6.25 0 0,1,0 0 0,0,0 113.395659432387 44.3028169014084 66.6 84.4257095158598 67.6289274106175 66.432 82.5025041736227 65.6478873239437 65.883 0 0 cat,cow,dog,elephant,horse,human,macaque,marmoset,mouse,orangutan,panda,pig,rabbit,rat, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0.810499,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000254586.1 ENST00000524479.1 chr11:17716600-17718844 2 641 1601 intergenic -6.25 0 0,1,1 0 0,0,0 32.5897035881435 51.0824484697064 66.6 0 77.9781386633354 66.432 0 75.6939412866958 65.883 0 0 cow,dog,horse,human,macaque,marmoset,orangutan,panda,pig,rabbit, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0.810499,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000255335.1 ENST00000529781.1 chr11:17716814-17718487 2 554 1117 intergenic -3.27 1 0,0,1 0 0,0,0 0 73.2166517457475 67.924 0 111.766338406446 50.571 0 108.492390331244 49.419 0 0 chimp,cow,elephant,horse,human,macaque,marmoset,orangutan,panda, antisense antisense A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0.021259,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000256006.1 ENST00000496975.2 chr11:18427156-18428278 2 268 852 intronic 0 0 0,1,0 0 0,0,0 0 0 32.984 0 0 75.852 0 0 81.539 0 0 chimp,cow,elephant,horse,human,macaque,marmoset,orangutan,panda,pig, sense_intronic sense_intronic A549@0.0275945,AG04450@0.0131715,BJ@0.0666725,GM12878@0.117464,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0.208539,MCF7@0,NHEK@0.0840837,NHLF@0,SKNSHRA@0.011114, 0 0 0 0 ENSG00000256588.1 ENST00000539313.1 chr11:18529155-18530367 2 628 582 intronic 0 0 0,1,0 0 0,0,0 0 0 137.766 6.93630573248408 0 194.186 7.19426751592357 2.50515463917526 192.585 0 0 chimp,cow,horse,human,macaque,marmoset,orangutan,pig, sense_intronic sense_intronic A549@0.01663,AG04450@0.0351985,BJ@0.0056975,GM12878@0.023901,H1HESC@0.016682,HELAS3@0.062198,HEPG2@0.0370755,HMEC@0,HSMM@0.0055405,HUVEC@0.004845,K562@0.07585,MCF7@0.02244,NHEK@0.0214077,NHLF@0,SKNSHRA@0.061056, 0 0 0 0 ENSG00000247595.2 ENST00000501599.2 chr11:18621334-18631802 5 1449 9011 exonic 4.94 0 0,0,1 0 0,0,0 322.579020013803 68.0762401509267 8.073 270.071083505866 91.3704361336145 11.018 228.318150448585 77.8203307069138 18.966 0 0 cat,chimp,cow,dog,elephant,guinea_pig,horse,human,macaque,marmoset,opossum,orangutan,panda,pig,rabbit, antisense lincRNA A549@0.156983,AG04450@0.0891465,BJ@0.053582,GM12878@0.19194,H1HESC@0.087505,HELAS3@0.113567,HEPG2@0.164419,HMEC@0,HSMM@0,HUVEC@0,K562@0.249164,MCF7@0.0305395,NHEK@0.059601,NHLF@0.001342,SKNSHRA@0.115089, 0 0 0 0 ENSG00000247595.2 ENST00000511927.2 chr11:18621336-18623311 3 570 1401 intergenic -1.55 0 0,0,0 0 0,0,0 146.935087719298 3.27765881513205 8.775 166.514035087719 10.6845110635261 11.018 140.740350877193 10.96573875803 18.966 0 1 human,macaque,marmoset,orangutan, antisense antisense A549@0.156983,AG04450@0.0891465,BJ@0.053582,GM12878@0.19194,H1HESC@0.087505,HELAS3@0.113567,HEPG2@0.164419,HMEC@0,HSMM@0,HUVEC@0,K562@0.249164,MCF7@0.0305395,NHEK@0.059601,NHLF@0.001342,SKNSHRA@0.115089, 0 0 0 0 ENSG00000247595.2 ENST00000542172.1 chr11:18624534-18625440 2 329 575 intergenic 3.05 0 0,0,1 0 0,0,0 228.382978723404 31.4782608695652 0 338.422492401216 6.65913043478261 14.037 316.781155015198 6.76695652173913 9.014 0 0 cat,chimp,cow,dog,elephant,guinea_pig,horse,human,macaque,marmoset,mouse,opossum,orangutan,pig,rabbit, antisense retained_intron A549@0.156983,AG04450@0.0891465,BJ@0.053582,GM12878@0.19194,H1HESC@0.087505,HELAS3@0.113567,HEPG2@0.164419,HMEC@0,HSMM@0,HUVEC@0,K562@0.249164,MCF7@0.0305395,NHEK@0.059601,NHLF@0.001342,SKNSHRA@0.115089, 0 0 0 0 ENSG00000254966.1 ENST00000527285.1 chr11:18728084-18762115 3 871 33156 exonic 0.28 0 0,1,0 0 0,0,0 109.873708381171 61.0141754131982 145.2 63.4649827784156 53.3336952587767 65.657 91.3559127439725 58.8902159488479 96.189 0 0 cat,chimp,cow,dog,horse,human,macaque,marmoset,mouse,orangutan,panda,pig, antisense antisense A549@0.0298615,AG04450@0.0067745,BJ@0.0249675,GM12878@0.0214555,H1HESC@0.495533,HELAS3@0,HEPG2@0,HMEC@0.01874,HSMM@0.053985,HUVEC@0.168127,K562@0.02513,MCF7@0.144052,NHEK@0.286112,NHLF@0,SKNSHRA@1.69125, 0 0 0 0 ENSG00000255244.1 ENST00000528646.1 chr11:18956532-18961268 2 705 4029 exonic 4.73 0 0,0,0 0 0,0,0 0 0 0 0 0 10.654 0 0 67.118 0 0 chimp,human,macaque,marmoset,orangutan,pig, antisense antisense A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000255308.1 ENST00000527978.1 chr11:19218322-19302973 4 512 84133 exonic 3.71 0 0,0,0 0 0,0,0 45.685546875 25.4416816231443 42.312 72.955078125 33.0392354961787 67.355 92.177734375 40.2674812499257 71.072 0 0 cat,chimp,cow,dog,elephant,horse,human,macaque,marmoset,mouse,orangutan,pig,rabbit,rat, antisense antisense A549@0,AG04450@0,BJ@0,GM12878@0.026691,H1HESC@0.00564,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0.005282,MCF7@0.0039845,NHEK@0.005117,NHLF@0.0037815,SKNSHRA@0.0044045, 0 0 0 0 ENSG00000255160.1 ENST00000528326.1 chr11:19321430-19329905 4 644 7825 intergenic 2.12 0 0,0,1 0 0,0,0 33.1180124223603 12.8523961661342 0 19.2531055900621 19.4421725239617 0 22.6506211180124 19.3987220447284 0 1 1 chimp,human,macaque,marmoset,orangutan, lincRNA lincRNA A549@0.0065455,AG04450@0,BJ@0.0037995,GM12878@0.0234705,H1HESC@0.009407,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0.0107495,MCF7@0.0233295,NHEK@0,NHLF@0,SKNSHRA@0.0124525, 0 0 0 0 ENSG00000255160.1 ENST00000529082.1 chr11:19321549-19329905 3 419 7933 intergenic -8.29 0 0,0,1 0 0,0,0 29.5942720763723 12.6774234211521 8.68 17.054892601432 19.1774864490105 4.944 21.9522673031026 19.1346275053574 5.072 0 0 chimp,dog,elephant,horse,human,macaque,marmoset,orangutan, lincRNA lincRNA A549@0.0065455,AG04450@0,BJ@0.0037995,GM12878@0.0234705,H1HESC@0.009407,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0.0107495,MCF7@0.0233295,NHEK@0,NHLF@0,SKNSHRA@0.0124525, 0 0 0 0 ENSG00000255270.1 ENST00000528204.1 chr11:19402031-19406561 2 504 4024 intronic 7.65 0 0,1,1 0 0,0,0 0 30.8489065606362 34.776 0 22.7278827037773 9.769 0 23.2798210735587 10.035 0 0 cat,chimp,cow,dog,elephant,guinea_pig,horse,human,macaque,marmoset,orangutan,panda,rabbit,rat, sense_intronic sense_intronic A549@0,AG04450@0,BJ@0,GM12878@0.0042885,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0.005163,HUVEC@0.044347,K562@0,MCF7@0,NHEK@0,NHLF@0.0150725,SKNSHRA@0, 0 0 0 0 ENSG00000255043.1 ENST00000528726.1 chr11:19524219-19528776 3 3304 1249 intronic 3.77 0 0,0,0 0 0,0,0 0.144673123486683 0 21.271 0 0 92.954 0 0 106.013 1 1 chimp,human,macaque,marmoset,orangutan, antisense antisense A549@0,AG04450@0,BJ@0.003914,GM12878@0,H1HESC@0,HELAS3@0.001486,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0.0006215,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000255043.1 ENST00000530652.1 chr11:19526438-19527447 3 566 439 intronic -1.10 0 0,0,0 0 0,0,0 0 0 0 0 0 0 0 0 0 0 0 chimp,elephant,horse,human,macaque,marmoset,orangutan, antisense antisense A549@0,AG04450@0,BJ@0.003914,GM12878@0,H1HESC@0,HELAS3@0.001486,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0.0006215,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000254622.1 ENST00000532874.1 chr11:19532437-19541443 3 1178 7824 intronic 1.28 0 0,0,0 0 0,0,0 3.69439728353141 11.284509202454 20.276 7.47198641765705 5.37359406952965 29.629 10.2258064516129 6.39519427402863 39.44 0 0 chimp,guinea_pig,human,macaque,marmoset,orangutan, antisense antisense A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0.0157005,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000254542.1 ENST00000534036.1 chr11:20000245-20002883 2 596 2040 intronic -0.19 0 0,0,0 0 0,0,0 16.6442953020134 0 102.604 19.4060402684564 8.73186274509804 67.511 17.9765100671141 7.42696078431373 59.939 0 0 cat,chimp,cow,dog,elephant,horse,human,macaque,marmoset,orangutan,panda,pig,rabbit, antisense antisense A549@0.044013,AG04450@0.0153725,BJ@0.052611,GM12878@0.008881,H1HESC@0,HELAS3@0.0384445,HEPG2@0.021528,HMEC@0,HSMM@0,HUVEC@0.0049765,K562@0.037866,MCF7@0.0851175,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000254453.1 ENST00000533767.1 chr11:20065392-20070849 2 780 4675 exonic 3.79 0 0,0,1 0 0,0,0 375.615384615385 119.477647058824 60.984 276.130769230769 115.959572192513 120.446 302.610256410256 116.704385026738 120.299 0 0 cat,chimp,cow,dog,elephant,guinea_pig,horse,human,macaque,marmoset,opossum,orangutan,panda,platypus,rabbit, antisense antisense A549@0.0086255,AG04450@0.006023,BJ@0.137719,GM12878@0,H1HESC@0.0053055,HELAS3@0.0556495,HEPG2@0.0037465,HMEC@0.005236,HSMM@0.064137,HUVEC@0.121065,K562@0.586557,MCF7@0.002571,NHEK@0.031846,NHLF@0.004935,SKNSHRA@0.017418, 0 0 0 0 ENSG00000254894.1 ENST00000526642.1 chr11:20141230-20142178 2 658 288 exonic -0.79 0 0,1,1 0 0,0,0 37.7674772036474 0 245.067 70.6534954407295 177.684027777778 344.754 74.1580547112462 133.503472222222 403.714 0 0 cat,chimp,dog,elephant,horse,human,macaque,marmoset,opossum,orangutan,panda,pig, antisense antisense A549@0.0065775,AG04450@0,BJ@0.0036665,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0.0060925,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000254906.1 ENST00000528795.1 chr11:20691971-20692843 2 394 476 intronic 0 0 0,0,0 0 0,0,0 0 29.7142857142857 26.496 3.77664974619289 26.2542016806723 19.684 3.82233502538071 26.3340336134454 29.158 0 0 cat,chimp,cow,elephant,human,macaque,marmoset,orangutan,panda,pig,rabbit, lincRNA processed_transcript A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000255167.1 ENST00000526362.1 chr11:21281607-21284116 2 721 1786 intronic 2.64 0 0,0,0 0 0,0,0 16.2690707350902 10.2754759238522 0 29.1858529819695 12.7217245240761 0 35.6477115117892 8.83538633818589 0 0 0 chimp,cow,dog,elephant,guinea_pig,horse,human,macaque,marmoset,mouse,orangutan,panda,pig,rabbit,rat, antisense antisense A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000254820.1 ENST00000530837.1 chr11:22134994-22138547 2 475 3076 intergenic -5.33 0 0,0,1 0 0,0,0 0 15.221066319896 0 0 23.2841352405722 0 0 26.9596879063719 0 0 1 chimp,human,macaque,orangutan, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000255372.1 ENST00000526935.1 chr11:22282755-22283802 2 514 531 exonic -3.78 0 0,0,0 0 0,0,0 64.5836575875486 30.5310734463277 10.81 78.579766536965 45.105461393597 58.242 94.2101167315175 45.9152542372881 74.967 0 1 chimp,human,macaque, antisense antisense A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0.015539,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 1 96 0 0 ENSG00000254768.1 ENST00000528009.1 chr11:22305276-22359791 4 631 53878 exonic -2.49 0 0,0,1 0 0,0,0 44.7480190174326 4.50232005642377 137.845 59.6402535657686 3.87024388433127 242.746 46.8129952456418 4.44183154534318 215.311 0 0 cat,chimp,cow,dog,elephant,horse,human,macaque,mouse,orangutan,panda,pig,rat, antisense antisense A549@0,AG04450@0,BJ@0.006815,GM12878@0,H1HESC@0.0039515,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000254768.1 ENST00000530569.1 chr11:22339298-22359770 2 523 19947 exonic -0.54 0 0,0,0 0 0,0,0 42.7456978967495 12.1610267208101 143.725 47.1013384321224 10.4537524439765 255.745 33.7131931166348 11.7905449441019 227.218 0 0 human, antisense antisense A549@0,AG04450@0,BJ@0.006815,GM12878@0,H1HESC@0.0039515,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000254768.1 ENST00000531304.1 chr11:22341366-22359770 2 569 17833 exonic -2.49 0 0,0,0 0 0,0,0 39.2899824253076 13.6026467784445 143.725 43.2934973637961 11.6929849156059 255.745 30.98769771529 12.8658666517131 227.218 0 0 cat,chimp,cow,dog,elephant,horse,human,macaque,marmoset,mouse,orangutan,pig,rabbit,rat, antisense antisense A549@0,AG04450@0,BJ@0.006815,GM12878@0,H1HESC@0.0039515,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000254540.1 ENST00000534543.1 chr11:22382759-22383840 2 170 909 intronic -7.15 0 0,0,1 0 0,0,0 0 0 26.307 0 0 56.826 0 4.25192519251925 61.099 0 0 chimp,dog,human,macaque,marmoset,mouse,opossum,rabbit, antisense antisense A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000255323.1 ENST00000534135.1 chr11:22467234-22468922 2 341 1345 intergenic -0.59 0 0,0,0 0 0,0,0 0 0 0 0 0 0 0 0 0 0 1 chimp,human,macaque,orangutan, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000255323.1 ENST00000532380.1 chr11:22467234-22513565 4 417 45908 intergenic -4.77 0 0,0,0 0 0,0,0 156.872901678657 18.1570314542128 185.555 171.587529976019 19.9639060730156 124.247 178.820143884892 19.1043391130086 128.096 0 0 cat,chimp,cow,dog,elephant,guinea_pig,horse,human,macaque,marmoset,mouse,opossum,orangutan,panda,pig,platypus,rat, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000255357.1 ENST00000531858.1 chr11:22513658-22524392 2 279 10453 intergenic -6.16 0 0,0,1 0 0,0,0 207.412186379928 22.1362288338276 288.711 169.878136200717 23.5855735195638 236.134 170.129032258065 19.4466660288912 255.362 0 0 cat,chimp,cow,dog,elephant,guinea_pig,human,macaque,marmoset,mouse,orangutan,panda,pig,rabbit,rat, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000246225.2 ENST00000525963.1 chr11:22850926-22898394 4 871 46591 intronic 6.14 0 0,1,0 1 0,0,0 0 0.620699276684338 0 0 1.25105707110815 8.382 25.1366245694604 13.4794702839604 8.595 0 0 cat,chimp,human,macaque,marmoset,orangutan, lincRNA non_coding A549@0.0446385,AG04450@0.031715,BJ@0.032425,GM12878@0.796253,H1HESC@0.005798,HELAS3@0.267707,HEPG2@0.134841,HMEC@0,HSMM@0.0072715,HUVEC@0.124819,K562@0.0314865,MCF7@0.0374125,NHEK@0.00735433,NHLF@0.003112,SKNSHRA@0.200675, 0 0 0 0 ENSG00000246225.2 ENST00000528701.1 chr11:22850958-22942196 4 623 90609 intronic 6.14 0 0,1,1 1 0,0,0 0 0.319162555596022 0 0 0.942268428081096 8.382 35.1428571428571 7.62157180853999 8.595 0 1 chimp,human,macaque,orangutan, lincRNA non_coding A549@0.0446385,AG04450@0.031715,BJ@0.032425,GM12878@0.796253,H1HESC@0.005798,HELAS3@0.267707,HEPG2@0.134841,HMEC@0,HSMM@0.0072715,HUVEC@0.124819,K562@0.0314865,MCF7@0.0374125,NHEK@0.00735433,NHLF@0.003112,SKNSHRA@0.200675, 0 0 0 0 ENSG00000246225.2 ENST00000499625.1 chr11:22850968-22966939 5 2024 113939 intronic 6.14 0 0,1,0 1 0,0,0 10.2134387351779 0.358077567821378 0 7.60177865612648 0.936308024469233 8.382 21.0163043478261 6.35865682514328 8.595 0 0 cat,chimp,horse,human,macaque,marmoset,mouse,orangutan,rabbit, lincRNA non_coding A549@0.0446385,AG04450@0.031715,BJ@0.032425,GM12878@0.796253,H1HESC@0.005798,HELAS3@0.267707,HEPG2@0.134841,HMEC@0,HSMM@0.0072715,HUVEC@0.124819,K562@0.0314865,MCF7@0.0374125,NHEK@0.00735433,NHLF@0.003112,SKNSHRA@0.200675, 0 0 0 0 ENSG00000255359.1 ENST00000532798.1 chr11:22868903-22881972 4 361 12702 intergenic -3.19 0 0,1,0 0 0,0,1 0 0 0 57.2963988919668 0.415997480711699 6.335 68.5678670360111 0.890962053219965 6.468 0 0 cat,chimp,elephant,guinea_pig,horse,human,macaque,marmoset,orangutan,panda,rabbit,rat, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000255359.1 ENST00000529466.1 chr11:22868925-22879698 2 372 10399 intergenic -5.50 0 0,1,0 0 0,0,1 0 0 0 30.3602150537634 0.145206269833638 0 40.9086021505376 0.721511683815752 0 0 0 cat,chimp,dog,elephant,guinea_pig,horse,human,macaque,marmoset,orangutan,panda,rabbit,rat, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000255418.1 ENST00000530576.1 chr11:23186446-23188332 4 506 1374 intergenic 2.36 0 0,1,0 0 0,0,0 0 0 0 0 0 5.704 0 0 5.957 1 1 chimp,human,macaque,marmoset,orangutan, lincRNA lincRNA A549@0,AG04450@0.021441,BJ@0,GM12878@0.135981,H1HESC@0,HELAS3@0.022609,HEPG2@0.0277615,HMEC@0,HSMM@0,HUVEC@0.0207325,K562@0.0052495,MCF7@0.007088,NHEK@0,NHLF@0,SKNSHRA@0.0196765, 0 0 0 0 ENSG00000255418.1 ENST00000533591.1 chr11:23186733-23224707 7 678 37284 intergenic 6.47 0 0,0,1 0 0,0,0 12.6902654867257 0.57051282051282 0 0 0.603154168007724 5.704 0 1.02274434073597 5.957 0 0 chimp,marmoset,orangutan, lincRNA lincRNA A549@0,AG04450@0.021441,BJ@0,GM12878@0.135981,H1HESC@0,HELAS3@0.022609,HEPG2@0.0277615,HMEC@0,HSMM@0,HUVEC@0.0207325,K562@0.0052495,MCF7@0.007088,NHEK@0,NHLF@0,SKNSHRA@0.0196765, 0 0 0 0 ENSG00000255193.1 ENST00000534068.1 chr11:23752134-23818516 4 679 65697 intergenic 1.64 0 0,0,0 0 0,0,0 0 0.373883130127707 0 0 1.54299283072286 0 0 6.79002085331141 0 0 0 cat,chimp,elephant,horse,human,macaque,orangutan,panda,rabbit, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0.0085635,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0.076691,HUVEC@0,K562@0,MCF7@0.0029435,NHEK@0,NHLF@0.014208,SKNSHRA@0, 0 0 0 0 ENSG00000254861.1 ENST00000525512.1 chr11:23782876-23826144 3 503 42761 intergenic -2.11 0 0,0,0 0 0,0,0 0 0.278594981408293 0 0 2.25757115128271 0 0 10.7681298379364 0 0 0 chimp,horse,human,macaque,marmoset,orangutan,panda, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000254594.1 ENST00000527283.1 chr11:24257023-24283751 6 548 26170 intergenic 2.04 0 0,0,0 0 0,0,0 0 0 0 0 1.16897210546427 0 0 2.54069545280856 0 0 0 chimp,horse,human,macaque,marmoset,orangutan, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000254594.1 ENST00000534492.1 chr11:24280945-24283764 3 395 2420 intergenic 2.04 0 0,0,0 0 0,0,0 0 0 0 0 0 0 0 0.602479338842975 0 0 0 chimp,elephant,horse,human,macaque,marmoset,orangutan, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000254456.1 ENST00000526327.1 chr11:25756317-25803213 5 458 46430 intergenic 3.71 0 0,0,0 0 0,0,0 0 0.326168425586905 0 0 0.280486754253715 0 0 0.543958647426233 0 0 1 chimp,human, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0.0039525, 0 0 0 0 ENSG00000254456.1 ENST00000533049.1 chr11:25756317-25803305 5 563 46417 intergenic 2.23 0 0,0,1 0 0,0,0 0 0.326259775513282 0 0 0.280565310123446 0 0 0.544110993816921 0 1 1 chimp,human,macaque,marmoset,orangutan, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0.0039525, 0 0 0 0 ENSG00000254456.1 ENST00000533942.1 chr11:25756356-25795970 5 570 39036 intergenic 0.66 0 0,0,0 0 0,0,0 0 0.387949584998463 0 0 0.280587150322779 0 0 0.534942104723845 0 0 0 chimp,elephant,horse,human,macaque,marmoset,orangutan, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0.0039525, 0 0 0 0 ENSG00000254754.1 ENST00000531157.1 chr11:25945735-25948355 2 346 2272 intergenic 0 0 0,0,0 0 0,0,0 0 8.61971830985915 0 0 1.57790492957746 0 0 2.92605633802817 0 0 0 chimp,horse,human,macaque,marmoset,orangutan,panda,pig, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000254819.1 ENST00000524858.1 chr11:26307258-26309554 3 713 1579 intronic -0.94 0 0,1,0 0 0,0,0 0 0 0 7.33800841514726 1.93793540215326 0 9.07152875175316 2.06713109563015 0 0 0 chimp,horse,human,macaque,marmoset,mouse,orangutan, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0.50056,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000254560.1 ENST00000526061.1 chr11:27068733-27240282 4 467 171076 intronic 1.50 0 0,1,0 0 0,0,0 0 12.7230587575113 0 0 11.8888681054034 0 0 12.6453915218967 0 0 0 cat,chimp,human,macaque,marmoset,orangutan, antisense antisense A549@0.0783755,AG04450@0.020626,BJ@0.0128955,GM12878@0.018759,H1HESC@0.756464,HELAS3@0.033617,HEPG2@0.0173025,HMEC@0,HSMM@0.033095,HUVEC@0,K562@1.2298,MCF7@0.107461,NHEK@0,NHLF@0.0136535,SKNSHRA@0.731721, 0 0 0 0 ENSG00000254560.1 ENST00000525302.1 chr11:27084530-27241660 5 578 156544 intronic 2.08 0 0,0,0 0 0,0,0 0 12.3472058973835 0 0 11.4400999080131 0 0 12.208305652085 0 0 0 chimp,dog,human,macaque,marmoset,orangutan, antisense antisense A549@0.0783755,AG04450@0.020626,BJ@0.0128955,GM12878@0.018759,H1HESC@0.756464,HELAS3@0.033617,HEPG2@0.0173025,HMEC@0,HSMM@0.033095,HUVEC@0,K562@1.2298,MCF7@0.107461,NHEK@0,NHLF@0.0136535,SKNSHRA@0.731721, 0 0 0 0 ENSG00000254560.1 ENST00000530430.1 chr11:27084567-27241633 5 874 156184 intronic 2.08 0 0,0,0 0 0,0,0 0 12.3756658812683 0 0 11.466469036521 0 0 12.2364454745685 0 0 1 chimp,human,macaque,orangutan, antisense antisense A549@0.0783755,AG04450@0.020626,BJ@0.0128955,GM12878@0.018759,H1HESC@0.756464,HELAS3@0.033617,HEPG2@0.0173025,HMEC@0,HSMM@0.033095,HUVEC@0,K562@1.2298,MCF7@0.107461,NHEK@0,NHLF@0.0136535,SKNSHRA@0.731721, 10 6 0 0 ENSG00000254560.1 ENST00000531363.1 chr11:27238699-27241649 2 743 2205 intergenic 1.50 0 0,0,0 0 0,0,0 0 14.6031746031746 0 0 13.3741496598639 0 0 16.0122448979592 0 0 1 chimp,human, antisense antisense A549@0.0783755,AG04450@0.020626,BJ@0.0128955,GM12878@0.018759,H1HESC@0.756464,HELAS3@0.033617,HEPG2@0.0173025,HMEC@0,HSMM@0.033095,HUVEC@0,K562@1.2298,MCF7@0.107461,NHEK@0,NHLF@0.0136535,SKNSHRA@0.731721, 0 0 0 0 ENSG00000254862.1 ENST00000525833.1 chr11:27493276-27497768 5 1345 3139 intronic 2.49 0 0,1,0 0 0,0,0 78.5472118959108 53.8047148773495 0 87.9553903345725 85.3055113093342 25.743 70.3799256505576 92.2666454284804 24.863 0 0 chimp,cow,elephant,horse,human,macaque,marmoset,orangutan,pig, antisense antisense A549@0.0714485,AG04450@0.0057935,BJ@0.0089935,GM12878@0,H1HESC@0.0221035,HELAS3@0.078164,HEPG2@0.0171425,HMEC@0.003033,HSMM@0,HUVEC@0,K562@0.003703,MCF7@0.0060585,NHEK@0.000945667,NHLF@0.0014455,SKNSHRA@0.029717, 0 0 0 0 ENSG00000254862.1 ENST00000529258.1 chr11:27493345-27503980 4 466 10163 intronic 5.35 0 0,0,0 0 0,0,0 188.607296137339 18.3393682967628 0 193.62660944206 30.0513627865788 25.743 156.579399141631 31.6328839909476 24.863 0 0 cat,chimp,cow,elephant,horse,human,macaque,marmoset,mouse,orangutan,panda,pig,rabbit,rat, antisense antisense A549@0.0714485,AG04450@0.0057935,BJ@0.0089935,GM12878@0,H1HESC@0.0221035,HELAS3@0.078164,HEPG2@0.0171425,HMEC@0.003033,HSMM@0,HUVEC@0,K562@0.003703,MCF7@0.0060585,NHEK@0.000945667,NHLF@0.0014455,SKNSHRA@0.029717, 0 0 0 0 ENSG00000245573.3 ENST00000530686.1 chr11:27528385-27697525 6 967 168163 exonic -2.45 0 0,1,0 1 0,0,0 181.837642192347 34.4995153511771 16.79 115.709410548087 34.2998578759894 28.752 139.352637021717 36.9895280174593 34.99 0 0 chimp,dog,horse,human,macaque,marmoset,orangutan,panda,rabbit, lincRNA non_coding A549@0.277134,AG04450@0.533553,BJ@0.332592,GM12878@0.592129,H1HESC@0.306756,HELAS3@0.120491,HEPG2@0.076151,HMEC@0.302866,HSMM@0.53089,HUVEC@0.341695,K562@0.482364,MCF7@0.157777,NHEK@0.500968,NHLF@0.704252,SKNSHRA@1.06542, 0 0 0 0 ENSG00000245573.3 ENST00000532965.1 chr11:27528396-27679880 6 566 150908 exonic -2.21 0 0,1,0 1 0,0,0 119.3074204947 36.1783603254963 16.79 87.0883392226148 35.4283536989424 28.752 110.902826855124 38.1890357038726 34.99 0 0 cat,chimp,cow,human,macaque,marmoset,mouse,orangutan,panda,pig,rabbit, lincRNA non_coding A549@0.277134,AG04450@0.533553,BJ@0.332592,GM12878@0.592129,H1HESC@0.306756,HELAS3@0.120491,HEPG2@0.076151,HMEC@0.302866,HSMM@0.53089,HUVEC@0.341695,K562@0.482364,MCF7@0.157777,NHEK@0.500968,NHLF@0.704252,SKNSHRA@1.06542, 0 0 0 0 ENSG00000245573.3 ENST00000499008.3 chr11:27528399-27699354 8 2316 168625 exonic 3.14 1 1,1,1 1 0,0,0 75.9227115716753 34.4049933283914 16.79 57.4991364421416 34.2031786508525 29.458 71.1705526770294 36.8797865085248 35.342 0 0 chimp,horse,human,macaque,orangutan,panda, lincRNA non_coding A549@0.277134,AG04450@0.533553,BJ@0.332592,GM12878@0.592129,H1HESC@0.306756,HELAS3@0.120491,HEPG2@0.076151,HMEC@0.302866,HSMM@0.53089,HUVEC@0.341695,K562@0.482364,MCF7@0.157777,NHEK@0.500968,NHLF@0.704252,SKNSHRA@1.06542, 0 0 0 0 ENSG00000245573.3 ENST00000501176.2 chr11:27528399-27699354 7 1473 169470 exonic -1.50 1 1,1,1 1 0,0,0 119.373387644263 34.2334454475718 16.79 81.0264765784114 34.1141617985484 29.458 97.89816700611 36.8176137369446 35.342 0 0 cat,chimp,human,macaque,marmoset,panda,pig, lincRNA non_coding A549@0.277134,AG04450@0.533553,BJ@0.332592,GM12878@0.592129,H1HESC@0.306756,HELAS3@0.120491,HEPG2@0.076151,HMEC@0.302866,HSMM@0.53089,HUVEC@0.341695,K562@0.482364,MCF7@0.157777,NHEK@0.500968,NHLF@0.704252,SKNSHRA@1.06542, 0 0 0 0 ENSG00000245573.3 ENST00000499568.2 chr11:27528399-27719721 9 2030 189276 exonic 3.14 1 0,1,0 1 0,0,0 181.612315270936 33.1888564847102 16.79 127.245812807882 33.024028402967 29.458 134.692610837438 35.7161658107737 35.342 0 0 chimp,elephant,horse,human,macaque,orangutan,panda,pig,rabbit, lincRNA non_coding A549@0.277134,AG04450@0.533553,BJ@0.332592,GM12878@0.592129,H1HESC@0.306756,HELAS3@0.120491,HEPG2@0.076151,HMEC@0.302866,HSMM@0.53089,HUVEC@0.341695,K562@0.482364,MCF7@0.157777,NHEK@0.500968,NHLF@0.704252,SKNSHRA@1.06542, 0 0 0 0 ENSG00000245573.3 ENST00000500662.2 chr11:27528399-27719721 7 1433 189877 exonic -1.08 1 0,1,0 1 0,0,0 257.273551988835 33.0838068855101 16.79 175.889741800419 32.9524639635132 29.458 184.358688066992 35.6517798364205 35.342 0 0 cat,chimp,guinea_pig,horse,human,macaque,marmoset,panda,pig,rabbit, lincRNA processed_transcript A549@0.277134,AG04450@0.533553,BJ@0.332592,GM12878@0.592129,H1HESC@0.306756,HELAS3@0.120491,HEPG2@0.076151,HMEC@0.302866,HSMM@0.53089,HUVEC@0.341695,K562@0.482364,MCF7@0.157777,NHEK@0.500968,NHLF@0.704252,SKNSHRA@1.06542, 0 0 0 0 ENSG00000245573.3 ENST00000502161.2 chr11:27528399-27719721 6 1276 190036 exonic -1.08 1 0,1,0 1 0,0,0 288.92868338558 33.0561262076659 16.79 190.854231974922 32.9713054368646 29.458 199.084639498433 35.6772348397146 35.342 0 0 chimp,cow,dog,elephant,guinea_pig,horse,human,macaque,marmoset,opossum,orangutan,panda,rabbit,rat, lincRNA non_coding A549@0.277134,AG04450@0.533553,BJ@0.332592,GM12878@0.592129,H1HESC@0.306756,HELAS3@0.120491,HEPG2@0.076151,HMEC@0.302866,HSMM@0.53089,HUVEC@0.341695,K562@0.482364,MCF7@0.157777,NHEK@0.500968,NHLF@0.704252,SKNSHRA@1.06542, 0 0 0 0 ENSG00000254934.1 ENST00000527083.1 chr11:27639173-27656069 3 783 16109 intergenic 3.74 0 0,0,0 0 0,0,0 0 14.3304984791111 0 6.53639846743295 18.013843193246 0 6.30906768837803 20.4865603079024 0 1 1 chimp,human,macaque,marmoset,orangutan, lincRNA lincRNA A549@0.0078985,AG04450@0,BJ@0.0030325,GM12878@0.006285,H1HESC@113.777,HELAS3@0.005947,HEPG2@0.0068365,HMEC@0,HSMM@0,HUVEC@0.02304,K562@0.003355,MCF7@0,NHEK@0.00412933,NHLF@0.007254,SKNSHRA@0, 0 0 0 0 ENSG00000254934.1 ENST00000534757.1 chr11:27639540-27656174 4 794 15834 intergenic 3.74 0 0,0,0 0 0,0,0 0 14.5793861311103 0 0 18.3267020335986 0 2.33627204030227 20.7252115700392 0 0 0 chimp,human,marmoset,orangutan,rat, lincRNA lincRNA A549@0.0078985,AG04450@0,BJ@0.0030325,GM12878@0.006285,H1HESC@113.777,HELAS3@0.005947,HEPG2@0.0068365,HMEC@0,HSMM@0,HUVEC@0.02304,K562@0.003355,MCF7@0,NHEK@0.00412933,NHLF@0.007254,SKNSHRA@0, 0 0 0 0 ENSG00000245573.3 ENST00000530313.1 chr11:27661436-27681196 2 594 19164 exonic -4.33 0 0,0,1 0 0,0,0 73.8905723905724 123.480171154248 17.71 55.3215488215488 123.856971404717 14.202 56.2138047138047 124.567731162597 26.259 0 0 cat,chimp,cow,elephant,horse,human,macaque,marmoset,orangutan,panda,pig,rabbit, lincRNA processed_transcript A549@0.277134,AG04450@0.533553,BJ@0.332592,GM12878@0.592129,H1HESC@0.306756,HELAS3@0.120491,HEPG2@0.076151,HMEC@0.302866,HSMM@0.53089,HUVEC@0.341695,K562@0.482364,MCF7@0.157777,NHEK@0.500968,NHLF@0.704252,SKNSHRA@1.06542, 0 0 0 0 ENSG00000245573.3 ENST00000501663.2 chr11:27686807-27699354 2 957 11588 intronic 4.59 1 0,0,1 0 0,0,0 0 6.856403175699 0 8.90282131661442 13.4087849499482 9.837 10.6102403343783 16.7317052122886 10.163 0 0 cat,chimp,human,macaque,orangutan,panda, lincRNA non_coding A549@0.277134,AG04450@0.533553,BJ@0.332592,GM12878@0.592129,H1HESC@0.306756,HELAS3@0.120491,HEPG2@0.076151,HMEC@0.302866,HSMM@0.53089,HUVEC@0.341695,K562@0.482364,MCF7@0.157777,NHEK@0.500968,NHLF@0.704252,SKNSHRA@1.06542, 0 0 0 0 ENSG00000255496.1 ENST00000530663.1 chr11:27717859-27899195 2 356 180978 intronic 0 0 0,0,0 0 0,0,0 120.699438202247 48.5573495120954 168.632 104.741573033708 55.8770513543083 139.548 123.926966292135 54.3612372774591 142.492 0 0 cow,dog,guinea_pig,horse,human,opossum,panda,platypus, processed_transcript processed_transcript A549@0.215612,AG04450@1.04765,BJ@0.619992,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0.0982095, 0 0 0 0 ENSG00000255094.1 ENST00000525309.1 chr11:28000216-28041122 4 802 40098 intergenic 3.11 0 0,0,0 0 0,0,0 0 5.88473240560626 0 0 12.6697341513292 2.97 0 15.7773704424161 6.713 0 0 chimp,cow,elephant,horse,human,macaque,marmoset,orangutan,rabbit, lincRNA lincRNA A549@0.0190975,AG04450@0.0265295,BJ@0.03629,GM12878@0.138851,H1HESC@0,HELAS3@0.063602,HEPG2@0.0539385,HMEC@0,HSMM@0.0235265,HUVEC@0.0086725,K562@0.038728,MCF7@0.0178,NHEK@0.00633533,NHLF@0.014525,SKNSHRA@0.0184565, 0 0 0 0 ENSG00000255322.1 ENST00000532947.1 chr11:28373654-28548588 5 682 174244 intergenic -1.34 1 0,1,1 0 0,0,0 0 16.5613450104451 0 2.18181818181818 16.795166548059 0 2.20821114369501 17.3650914809118 0 0 0 cat,chimp,elephant,horse,human,macaque,orangutan,panda,pig, lincRNA lincRNA A549@0.26024,AG04450@0.088111,BJ@0.08547,GM12878@0.366497,H1HESC@0.017976,HELAS3@0.0883445,HEPG2@0.158625,HMEC@0.00596,HSMM@0.0222575,HUVEC@0.042914,K562@0.109262,MCF7@0.104028,NHEK@0.0482063,NHLF@0.039573,SKNSHRA@0.0852115, 0 0 0 0 ENSG00000254606.1 ENST00000524707.1 chr11:28538379-28540888 2 745 1762 intergenic -7.58 0 0,0,0 0 0,0,0 0 126.385357548241 0 0 167.241203178207 0 0 159.739500567537 0 0 0 cat,chimp,cow,elephant,horse,human,macaque,marmoset,orangutan,panda,pig, lincRNA lincRNA A549@0.0657305,AG04450@0.0325785,BJ@0.0237125,GM12878@0.150154,H1HESC@0.0567675,HELAS3@0.043753,HEPG2@0.0408955,HMEC@0,HSMM@0,HUVEC@0.011952,K562@0.056242,MCF7@0.0093,NHEK@0.002512,NHLF@0,SKNSHRA@0.0129675, 0 0 0 0 ENSG00000248990.1 ENST00000505409.1 chr11:28700730-28705016 3 517 3765 intergenic -2.42 0 0,0,1 0 0,0,0 0 24.1859229747676 0 0 33.1710491367862 0 0 32.4236387782205 0 0 0 chimp,dog,human,macaque,marmoset,orangutan,pig,rabbit, lincRNA lincRNA A549@0.0301175,AG04450@0,BJ@0.0093075,GM12878@0.0173995,H1HESC@0,HELAS3@0.0379455,HEPG2@0.0104915,HMEC@0,HSMM@0,HUVEC@0,K562@0.0094465,MCF7@0,NHEK@0.00490967,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000249867.1 ENST00000513853.1 chr11:28724162-29066418 4 802 341448 intergenic 1.71 0 0,1,0 0 0,0,0 94.9775561097257 16.6181409760784 227.96 56.8690773067332 18.9095704177503 280.046 47.7019950124688 19.4661119701975 231.322 0 0 cat,chimp,cow,elephant,guinea_pig,horse,human,macaque,marmoset,orangutan,pig,rabbit, lincRNA lincRNA A549@0.199219,AG04450@0.002781,BJ@0,GM12878@0.0036285,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0.045897,HSMM@0.013315,HUVEC@0.213943,K562@0,MCF7@0.0101475,NHEK@0.017724,NHLF@0,SKNSHRA@0.056242, 0 0 0 0 ENSG00000249867.1 ENST00000511073.1 chr11:28923828-29085368 4 777 160757 intergenic 0.32 0 0,0,0 0 0,0,0 0 15.2521756439844 0 0 16.6569045204875 0 0 17.1117400797477 1.175 0 1 chimp,human,macaque,orangutan, lincRNA lincRNA A549@0.199219,AG04450@0.002781,BJ@0,GM12878@0.0036285,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0.045897,HSMM@0.013315,HUVEC@0.213943,K562@0,MCF7@0.0101475,NHEK@0.017724,NHLF@0,SKNSHRA@0.056242, 0 0 0 0 ENSG00000254526.1 ENST00000530960.1 chr11:29181503-29288281 5 487 106283 intergenic 0.27 0 0,0,0 0 0,0,0 0 18.3116208612854 0 129.977412731006 22.6285859450712 7.337 130.242299794661 23.2522698832363 10.075 0 0 chimp,cow,dog,human,macaque,marmoset,mouse,orangutan,panda,pig,rabbit,rat, lincRNA lincRNA A549@0.141405,AG04450@0.22709,BJ@0.070778,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0.0071035,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000254530.1 ENST00000525097.1 chr11:29357425-29615842 4 444 257967 intergenic -1.09 0 0,0,1 0 0,0,0 0 4.50019963793819 0 0 7.2340027988076 0 0 15.7439439928363 0 0 0 cat,chimp,elephant,horse,human,macaque,marmoset,orangutan,rabbit, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000254530.1 ENST00000528553.1 chr11:29357445-29371896 2 303 14146 intergenic -0.04 0 0,0,0 0 0,0,0 0 9.75788208680899 0 0 19.011381309204 0 0 20.3509119185636 0 0 0 cat,chimp,horse,human,macaque,marmoset,orangutan,panda, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000255227.1 ENST00000527727.1 chr11:29467034-29478940 6 557 11339 intergenic -3.87 0 0,0,0 0 0,0,0 0 1.58920539730135 0 0 2.25672457888703 0 0 2.52535496957404 0 0 0 chimp,cow,dog,human,macaque,marmoset,orangutan,panda, lincRNA lincRNA A549@0.054738,AG04450@0.0268445,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0.0148455,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0.017615, 0 0 0 0 ENSG00000255029.1 ENST00000530389.1 chr11:29540623-29574186 2 561 33000 intergenic 3.41 0 0,0,0 0 0,0,0 0 2.90851515151515 0 0 3.74857575757576 0 0 3.84760606060606 0 0 1 chimp,human, lincRNA lincRNA A549@0.051364,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0.0455485,HEPG2@0.004845,HMEC@0,HSMM@0.0113585,HUVEC@0.358829,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0.0161475, 0 0 0 0 ENSG00000255117.1 ENST00000527492.1 chr11:29616465-29652211 3 393 35349 intergenic -6.13 0 0,0,0 0 0,0,0 0 5.00265919828001 0 0 5.33884975529718 0 0 5.93456674870576 0 0 0 cat,chimp,cow,dog,elephant,horse,human,macaque,marmoset,orangutan,panda, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0.011412,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000255117.1 ENST00000528119.1 chr11:29640349-29652211 3 798 11060 intergenic -5.09 0 0,0,0 0 0,0,0 0 10.2408679927667 0 0 10.5952983725136 0 0 10.2438517179024 0 0 0 chimp,elephant,human,macaque,marmoset,orangutan, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0.011412,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000254734.1 ENST00000530249.1 chr11:29735456-29903261 3 573 167228 intergenic -2.74 0 0,0,0 0 0,0,0 0 4.16200636257086 0 0 6.66312459635946 0 0 11.6807233238453 0 0 0 chimp,cow,elephant,horse,human,macaque,marmoset,orangutan,pig, processed_transcript processed_transcript A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000254532.1 ENST00000527819.1 chr11:30065605-30105890 2 427 39856 intergenic -2.62 0 0,0,0 0 0,0,0 0 3.22581292653553 0 0 4.63997892412686 0 0 5.57680148534725 0 0 0 chimp,elephant,human,macaque,marmoset,orangutan, lincRNA lincRNA A549@0.040933,AG04450@0,BJ@0,GM12878@0,H1HESC@0.013568,HELAS3@0.010896,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0.0119027,NHLF@0,SKNSHRA@0.11589, 0 0 0 0 ENSG00000255480.1 ENST00000529078.1 chr11:30447099-30450815 2 363 3351 intronic -2.72 0 0,0,0 0 0,0,0 22.8099173553719 0 74.91 0 1.59952253058788 88.419 0 1.60429722470904 79.895 0 0 chimp,dog,human,macaque,marmoset,orangutan, antisense antisense A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000254489.1 ENST00000531002.1 chr11:30605677-30652055 5 536 45834 intronic -9.44 0 0,1,0 1 0,0,0 95.3134328358209 35.7863812889994 148.748 134.85447761194 43.3094864074704 111.41 69.6417910447761 43.043875725444 91.907 0 0 chimp,dog,elephant,human,macaque,marmoset,mouse,orangutan,panda,pig,rat, antisense antisense A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0.1534,NHEK@0,NHLF@0,SKNSHRA@0.274224, 0 0 0 0 ENSG00000254489.1 ENST00000525871.1 chr11:30605710-30606507 2 437 358 intronic 0 0 1,1,1 1 0,0,0 159.908466819222 103.91061452514 165.116 213.672768878719 120.134078212291 128.273 172.034324942792 93.8631284916201 108.308 0 0 cat,chimp,cow,dog,elephant,horse,human,macaque,marmoset,mouse,orangutan,panda,pig,rabbit,rat, antisense antisense A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0.1534,NHEK@0,NHLF@0,SKNSHRA@0.274224, 0 0 0 0 ENSG00000255525.1 ENST00000528872.1 chr11:31327232-31336095 4 572 8285 exonic 0 0 0,0,0 0 0,0,0 248.262237762238 19.5841882920941 282.18 148.526223776224 20.9397706698853 326.938 183.791958041958 19.5781532890766 332.04 0 0 chimp,cow,dog,guinea_pig,horse,human,macaque,marmoset,mouse,opossum,orangutan,pig,platypus, antisense antisense A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000228061.1 ENST00000429821.1 chr11:31658875-31789501 4 573 130047 intronic -5.60 0 0,0,0 0 0,0,0 132.492146596859 61.0488823271586 196.339 166.417102966841 71.681153736726 190.737 152.542757417103 73.3067583258361 178.721 0 0 chimp,cow,dog,elephant,horse,human,macaque,marmoset,mouse,orangutan,panda,pig,rabbit,rat, processed_transcript processed_transcript A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0.0236375,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000228061.1 ENST00000454509.1 chr11:31710730-31789373 3 595 78044 intronic -5.60 0 0,0,0 0 0,0,0 14.0504201680672 44.308531085029 125.555 46.8571428571429 56.0704090000512 159.44 44.0638655462185 57.8839372661576 142.616 0 0 chimp,cow,dog,elephant,horse,human,macaque,marmoset,mouse,orangutan,panda,pig,rabbit, processed_transcript processed_transcript A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0.0236375,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000228061.1 ENST00000434742.1 chr11:31749333-31789373 3 451 39585 intronic -5.60 0 0,0,0 0 0,0,0 18.5365853658537 49.8677781988127 125.555 61.8181818181818 63.8307692307692 159.44 58.1330376940133 65.124415814071 142.616 0 0 chimp,cow,dog,elephant,horse,human,macaque,marmoset,mouse,orangutan,panda,pig,rabbit,rat, processed_transcript processed_transcript A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0.0236375,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000254584.1 ENST00000531962.1 chr11:32057527-32062864 3 817 4516 intronic -3.21 0 0,0,1 0 0,0,0 0 0 129.037 5.55813953488372 1.29207263064659 214.998 20.6891064871481 1.81443755535872 284.551 0 0 chimp,elephant,human,macaque,marmoset,mouse,orangutan,pig,rabbit, antisense antisense A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0.0026535,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000254584.1 ENST00000531627.1 chr11:32061652-32062794 2 411 729 intronic 3.65 0 0,0,0 0 0,0,0 0 0 129.037 8.43795620437956 0 214.998 8.43795620437956 0 291.272 0 0 cat,chimp,cow,dog,elephant,human,macaque,marmoset,orangutan,panda, antisense antisense A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0.0026535,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000254836.1 ENST00000525382.1 chr11:32074389-32074806 2 239 176 intronic 0 0 0,0,0 0 0,0,0 0 0 0 0 0 0 0 0 0 0 0 chimp,cow,human,macaque,marmoset,orangutan, antisense antisense A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000254627.1 ENST00000533832.1 chr11:32086458-32093719 3 323 6934 intronic -2.39 1 0,0,1 0 0,0,0 0 13.2655033169888 52.397 0 19.6753677531007 116.196 0 23.9671185462936 116.177 0 0 cat,chimp,dog,human,macaque,marmoset,orangutan,panda,rabbit, sense_intronic sense_intronic A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000255252.1 ENST00000533009.1 chr11:32118689-32126637 2 148 7798 exonic 0 0 0,1,1 0 0,1,0 158.77027027027 28.8200820723262 11.308 209.72972972973 43.0870736086176 24.86 236.871621621622 46.613618876635 18.184 0 0 cat,chimp,dog,guinea_pig,human,macaque,marmoset,orangutan,panda,pig,platypus,rabbit,rat, antisense antisense A549@0.098655,AG04450@0.275027,BJ@0.172682,GM12878@0.223461,H1HESC@0.0414895,HELAS3@0.0618075,HEPG2@0.12904,HMEC@0.027298,HSMM@0.096021,HUVEC@0.0720995,K562@0.0684455,MCF7@0.0545245,NHEK@0.16485,NHLF@0.0773255,SKNSHRA@0.0757065, 0 0 0 0 ENSG00000255375.1 ENST00000525133.1 chr11:32154245-32165125 3 643 10233 intergenic 5.48 0 0,1,0 0 0,0,0 0 5.9521157040946 0 0 3.32746995016124 0 0 3.85927880386983 0 0 1 chimp,human,marmoset,orangutan, lincRNA lincRNA A549@0.057643,AG04450@0,BJ@0,GM12878@1.12266,H1HESC@0,HELAS3@0.0142315,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0.0071885,MCF7@0,NHEK@0.002039,NHLF@0,SKNSHRA@0.0105545, 0 0 0 0 ENSG00000183242.7 ENST00000494911.1 chr11:32457064-32460253 3 1317 1868 exonic 1.87 0 0,1,0 1 0,1,0 27.4533029612756 4.3576017130621 202.002 60.5117691723614 10.7901498929336 293.529 53.8238420652999 10.3576017130621 336.229 1 1 chimp,human,macaque,marmoset,orangutan, lincRNA antisense A549@0.168743,AG04450@0,BJ@0,GM12878@0.0006125,H1HESC@0.0009675,HELAS3@0.0375885,HEPG2@0.0089695,HMEC@0,HSMM@0.0073355,HUVEC@0.01307,K562@1.49085,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0.357333, 0 0 0 0 ENSG00000183242.7 ENST00000395900.1 chr11:32457125-32462950 2 3826 1997 exonic 3.80 0 0,1,1 1 0,1,0 71.4947726084684 4.07611417125689 225.975 109.261630946158 10.0931397095643 328.055 94.5551489806586 9.6885327991988 371.792 0 0 chimp,dog,human,orangutan,pig, lincRNA antisense A549@0.168743,AG04450@0,BJ@0,GM12878@0.0006125,H1HESC@0.0009675,HELAS3@0.0375885,HEPG2@0.0089695,HMEC@0,HSMM@0.0073355,HUVEC@0.01307,K562@1.49085,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0.357333, 0 0 0 0 ENSG00000183242.7 ENST00000459866.1 chr11:32457322-32458597 2 326 947 intergenic 0 0 1,1,1 1 0,1,0 0 8.59556494192186 198.351 8.91717791411043 19.129883843717 316.406 9.19938650306748 18.2428722280887 353.938 0 0 chimp,cow,elephant,horse,human,macaque,marmoset,orangutan,panda,rabbit, lincRNA antisense A549@0.168743,AG04450@0,BJ@0,GM12878@0.0006125,H1HESC@0.0009675,HELAS3@0.0375885,HEPG2@0.0089695,HMEC@0,HSMM@0.0073355,HUVEC@0.01307,K562@1.49085,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0.357333, 0 0 0 0 ENSG00000183242.7 ENST00000525436.1 chr11:32457347-32480315 5 1249 21711 intergenic 7.01 0 0,1,1 1 0,1,0 109.727782225781 41.7037907051725 188.301 127.467574059247 45.7903366956842 301.181 110.7742193755 46.3517571737829 338.013 0 0 chimp,cow,dog,elephant,horse,human,macaque,orangutan,panda, lincRNA antisense A549@0.168743,AG04450@0,BJ@0,GM12878@0.0006125,H1HESC@0.0009675,HELAS3@0.0375885,HEPG2@0.0089695,HMEC@0,HSMM@0.0073355,HUVEC@0.01307,K562@1.49085,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0.357333, 0 0 0 0 ENSG00000183242.7 ENST00000478367.1 chr11:32459169-32459872 2 559 142 intergenic 0 0 0,0,1 0 0,1,0 0 0 8.14 0 0 2.04 0 0 2.072 0 0 cat,chimp,human,marmoset,orangutan, lincRNA antisense A549@0.168743,AG04450@0,BJ@0,GM12878@0.0006125,H1HESC@0.0009675,HELAS3@0.0375885,HEPG2@0.0089695,HMEC@0,HSMM@0.0073355,HUVEC@0.01307,K562@1.49085,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0.357333, 0 0 0 0 ENSG00000183242.7 ENST00000426618.2 chr11:32459475-32461618 1 2143 0 intergenic 3.80 1 0,0,1 0 0,1,0 38.6374241717219 0 0 101.627158189454 0 0 77.4274381707886 0 0 0 0 chimp,cow,human,macaque,orangutan,pig,rat, lincRNA antisense A549@0.168743,AG04450@0,BJ@0,GM12878@0.0006125,H1HESC@0.0009675,HELAS3@0.0375885,HEPG2@0.0089695,HMEC@0,HSMM@0.0073355,HUVEC@0.01307,K562@1.49085,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0.357333, 0 0 0 0 ENSG00000183242.7 ENST00000442957.1 chr11:32459916-32460678 2 480 280 intergenic 0.91 1 0,1,1 0 0,1,0 0 0 0 8.5 0 0 8.83333333333333 0 0 0 0 cat,chimp,cow,dog,elephant,horse,human,macaque,marmoset,orangutan,panda,pig,rabbit, lincRNA antisense A549@0.168743,AG04450@0,BJ@0,GM12878@0.0006125,H1HESC@0.0009675,HELAS3@0.0375885,HEPG2@0.0089695,HMEC@0,HSMM@0.0073355,HUVEC@0.01307,K562@1.49085,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0.357333, 0 0 0 0 ENSG00000247151.2 ENST00000531870.1 chr11:33183203-33211840 3 565 28068 intronic -2.75 0 0,1,0 1 0,0,0 0 5.72858771554795 158.39 0 12.327846658116 105.554 0 24.7224953683911 104.145 0 0 cat,chimp,cow,dog,elephant,guinea_pig,horse,human,macaque,marmoset,mouse,orangutan,panda,pig,rabbit,rat, lincRNA non_coding A549@0.161903,AG04450@0.0207895,BJ@0.037109,GM12878@0.247381,H1HESC@0.572724,HELAS3@0.0429245,HEPG2@0.131478,HMEC@0.028192,HSMM@0.068326,HUVEC@0.065081,K562@0.299262,MCF7@0.0426595,NHEK@0.00127733,NHLF@0.0530425,SKNSHRA@0.129827, 0 0 0 0 ENSG00000247151.2 ENST00000500025.2 chr11:33183234-33213144 4 2027 27877 intronic 6.40 1 1,1,1 1 0,0,0 0 5.7678372852172 158.39 0.707449432659102 12.4123112243068 105.554 2.48445979279724 24.891882196793 101.958 0 0 chimp,human,macaque,marmoset,mouse,orangutan, lincRNA non_coding A549@0.161903,AG04450@0.0207895,BJ@0.037109,GM12878@0.247381,H1HESC@0.572724,HELAS3@0.0429245,HEPG2@0.131478,HMEC@0.028192,HSMM@0.068326,HUVEC@0.065081,K562@0.299262,MCF7@0.0426595,NHEK@0.00127733,NHLF@0.0530425,SKNSHRA@0.129827, 0 0 0 0 ENSG00000255202.1 ENST00000534431.1 chr11:33686766-33718247 4 644 30831 exonic 4.05 0 1,1,1 1 0,0,0 0 14.325419220914 0 60.2034161490683 17.9786578443774 6.792 50.4425465838509 17.6349129123285 6.936 0 0 chimp,human,macaque,marmoset,orangutan,pig, antisense antisense A549@0.048529,AG04450@0.027541,BJ@0.0225365,GM12878@0.003111,H1HESC@0,HELAS3@0.0772085,HEPG2@0.202055,HMEC@0.183247,HSMM@0.009526,HUVEC@0.0323615,K562@0.0071665,MCF7@0.0186155,NHEK@0.184616,NHLF@0.0059885,SKNSHRA@0.0105165, 0 0 0 0 ENSG00000254549.1 ENST00000524444.1 chr11:33730981-33731568 2 566 19 exonic 2.18 0 0,1,1 0 0,0,0 0 0 0 0 0 0 0 0 0 0 0 cat,chimp,cow,dog,human,macaque,marmoset,orangutan,panda,pig, antisense non_coding A549@0.313933,AG04450@0.797013,BJ@0.875355,GM12878@0.0613475,H1HESC@0.073249,HELAS3@0.207093,HEPG2@0.101764,HMEC@0.016399,HSMM@0,HUVEC@0.068723,K562@0.169656,MCF7@0,NHEK@0.763149,NHLF@0.506822,SKNSHRA@0.363433, 0 0 0 0 ENSG00000254508.1 ENST00000533046.1 chr11:33796245-33797216 3 383 584 intergenic 1.69 1 0,1,0 0 0,0,0 0 0 23.32 0 0 93.231 0 0 99.035 0 0 chimp,horse,human,macaque,marmoset,orangutan, antisense antisense A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0.005517,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0.00342033,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000254508.1 ENST00000530352.1 chr11:33796251-33797216 3 373 588 intergenic 5.50 1 0,1,0 0 0,0,0 0 0 23.32 0 0 91.317 0 0 97.085 0 0 chimp,horse,human,macaque,marmoset,orangutan, antisense antisense A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0.005517,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0.00342033,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000255272.1 ENST00000528779.1 chr11:33797734-33801041 2 484 2821 intergenic 0.95 0 0,0,0 0 0,0,0 0 0 0 0 1.8110599078341 1.673 6.74380165289256 3.11520737327189 8.176 0 0 cat,chimp,cow,dog,elephant,horse,human,macaque,marmoset,orangutan,panda, antisense antisense A549@0,AG04450@0,BJ@0,GM12878@0.010928,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000255169.1 ENST00000534666.1 chr11:33826314-33827187 3 544 325 intergenic -4.25 0 0,0,1 0 0,0,0 11.3235294117647 42.6461538461539 0 177.066176470588 21.2307692307692 0 10.1452205882353 38.3938461538462 7.53 0 0 chimp,cow,dog,elephant,human,macaque,marmoset,orangutan,panda,pig, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000254619.1 ENST00000527270.1 chr11:33831691-33832724 2 319 712 intergenic -1.62 0 0,0,0 0 0,0,0 0 0 0 0 0 0 0 0 0 0 1 chimp,human,macaque,orangutan, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000255133.1 ENST00000525320.1 chr11:33836423-33843641 3 305 6909 intergenic 6.44 0 0,0,0 0 0,0,0 0 0 34.695 0 1.77551020408163 49.588 0 1.83022145028224 51.499 0 1 chimp,human,macaque,marmoset, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0.0171363,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000255271.1 ENST00000527984.1 chr11:34554561-34579471 3 386 24520 intergenic -9.16 0 0,0,0 0 0,0,0 0 3.61676182707993 0 0 17.5423327895595 0 0 18.5340946166395 3.402 1 1 chimp,human,macaque,marmoset,orangutan, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000255427.1 ENST00000527135.1 chr11:34592423-34595529 2 562 2542 intergenic -5.47 0 0,1,1 0 0,0,0 75.4466192170818 0 39.289 43.7437722419929 0.601888276947286 32.232 47.9555160142349 0.981117230527144 35.24 0 0 chimp,cow,dog,elephant,guinea_pig,horse,human,macaque,marmoset,mouse,orangutan,panda,pig,rabbit,rat, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0.0096655,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0.004023, 0 0 0 0 ENSG00000255521.1 ENST00000528366.1 chr11:35154202-35159579 3 1099 4274 intergenic 6.41 0 0,0,1 0 0,0,0 0 0 0 0 6.18998596162845 0 0 7.0982686008423 0 0 0 chimp,elephant,human,macaque,marmoset, antisense antisense A549@0.0623405,AG04450@0.0718835,BJ@0.020332,GM12878@0.027812,H1HESC@0.0135405,HELAS3@0.0521195,HEPG2@0.0049505,HMEC@0.108223,HSMM@0.0039355,HUVEC@0,K562@0.0107785,MCF7@0.0313045,NHEK@0.036406,NHLF@0.056494,SKNSHRA@0.125014, 0 0 0 0 ENSG00000255521.1 ENST00000530263.1 chr11:35157781-35159273 2 420 1070 intergenic 6.41 0 0,0,0 0 0,0,0 0 0 0 0 4.69065420560748 0 0 5.08317757009346 0 0 0 chimp,cow,guinea_pig,horse,human,macaque,marmoset,orangutan,panda, antisense antisense A549@0.0623405,AG04450@0.0718835,BJ@0.020332,GM12878@0.027812,H1HESC@0.0135405,HELAS3@0.0521195,HEPG2@0.0049505,HMEC@0.108223,HSMM@0.0039355,HUVEC@0,K562@0.0107785,MCF7@0.0313045,NHEK@0.036406,NHLF@0.056494,SKNSHRA@0.125014, 0 0 0 0 ENSG00000255443.1 ENST00000528869.1 chr11:35231890-35236532 2 585 4055 exonic -5.49 0 0,1,0 0 0,0,0 0 0 0 10.7641025641026 9.14599260172626 0 17.3059829059829 9.9422934648582 0 0 0 cat,chimp,cow,elephant,human,macaque,marmoset,orangutan,panda,pig,rabbit, antisense antisense A549@0,AG04450@0.017723,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0.01003,NHLF@0.006648,SKNSHRA@0, 0 0 0 0 ENSG00000251194.2 ENST00000510619.2 chr11:35234097-35235554 2 702 753 intronic -2.11 0 0,0,0 0 0,0,0 0 0 0 0 7.89243027888446 1.24 3.11538461538462 8.47808764940239 4.276 0 0 chimp,cow,guinea_pig,human,macaque,marmoset,orangutan,rat, sense_intronic sense_intronic A549@0.438551,AG04450@5.77025,BJ@1.91041,GM12878@0.956809,H1HESC@0.0662105,HELAS3@0.145298,HEPG2@0.313744,HMEC@2.06324,HSMM@0.040631,HUVEC@0.0485265,K562@0.0596655,MCF7@0.0094825,NHEK@2.20975,NHLF@0.392968,SKNSHRA@0.799681, 0 0 0 0 ENSG00000255004.1 ENST00000532760.1 chr11:35303360-35307556 2 774 3420 intronic 0.29 0 0,0,0 0 0,0,0 0 0 80.088 0 4.55058479532164 95.431 2.67700258397933 4.49941520467836 96.779 0 0 chimp,elephant,human,macaque,marmoset,orangutan, antisense antisense A549@0,AG04450@0,BJ@0.0031725,GM12878@0.0112365,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0.004973,SKNSHRA@0, 0 0 0 0 ENSG00000255542.1 ENST00000534165.1 chr11:35440604-35442549 2 516 1427 exonic 3.14 0 0,1,1 0 0,0,0 40.6976744186046 266.76594253679 71.26 44.9166666666667 147.122634898388 49.305 34.8333333333333 139.354590049054 42.25 0 0 chimp,cow,horse,human,marmoset,orangutan,panda,rabbit, antisense antisense A549@0,AG04450@0.006225,BJ@0,GM12878@0,H1HESC@0.0264785,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0.0075335,SKNSHRA@0, 0 0 0 0 ENSG00000254669.1 ENST00000527684.1 chr11:35600978-35606858 4 533 5341 intergenic -4.86 0 0,1,0 0 0,0,0 0 9.17936715970792 70.244 3.13883677298311 6.322785995132 141.84 3.29643527204503 8.85976408912189 156.689 1 1 chimp,human,macaque,marmoset,orangutan, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0.0437595,NHEK@0,NHLF@0,SKNSHRA@0.012675, 0 0 0 0 ENSG00000254686.1 ENST00000525573.1 chr11:35677775-35682887 4 798 4308 intergenic -4.54 0 0,1,1 0 0,0,0 0 0 14.135 8.2468671679198 0.575673166202414 42.802 8.51127819548872 0.58263695450325 57.06 0 1 chimp,human,macaque,orangutan, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0.005131,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000254919.1 ENST00000531569.1 chr11:35936601-35940268 3 538 3125 intergenic -2.71 0 0,0,0 0 0,0,0 0 0 72.568 7.00371747211896 0 62.153 13.5520446096654 0 57.717 0 0 cat,chimp,human,macaque,marmoset,orangutan,pig,rabbit, antisense antisense A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0.010759,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0.0042135,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0.0167825, 0 0 0 0 ENSG00000254919.1 ENST00000525363.1 chr11:35939217-35940289 2 605 465 intergenic -6.52 0 0,0,0 0 0,0,0 0 0 72.568 0 0 62.153 0 0 57.717 0 0 chimp,cow,elephant,guinea_pig,human,macaque,marmoset,orangutan,pig, antisense antisense A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0.010759,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0.0042135,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0.0167825, 0 0 0 0 ENSG00000255256.1 ENST00000534594.1 chr11:35993978-36010557 2 492 16085 intronic 0 0 0,1,0 0 0,0,0 0 4.08958657133976 0 0 4.43214174696923 3.585 0 5.84755983835872 3.765 0 0 cat,chimp,cow,guinea_pig,horse,human,macaque,marmoset,orangutan, sense_intronic sense_intronic A549@0.0052455,AG04450@0.011316,BJ@0,GM12878@0.002361,H1HESC@0.047853,HELAS3@0,HEPG2@0.030467,HMEC@0,HSMM@0,HUVEC@0.036302,K562@0.0059985,MCF7@0,NHEK@0.011843,NHLF@0,SKNSHRA@0.0120005, 0 0 0 0 ENSG00000254566.1 ENST00000529910.1 chr11:36342708-36344990 2 533 1747 intronic -2.51 0 0,0,0 0 0,0,0 0 0 0 0 0 0 0 0 0 0 0 chimp,dog,guinea_pig,human,macaque,marmoset,orangutan,panda, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000255186.1 ENST00000533203.1 chr11:36408071-36409800 2 149 1578 intronic 0 1 0,0,0 0 0,0,0 0 0 0 0 1.74904942965779 1.195 0 1.79974651457541 1.215 0 0 chimp,cow,guinea_pig,human,macaque,marmoset,orangutan,panda,pig,rabbit, sense_intronic sense_intronic A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000255060.1 ENST00000531966.1 chr11:36446997-36447672 2 476 197 intronic 0.70 0 0,0,0 0 0,0,0 0 0 0 0 0 0 0 0 0 0 0 chimp,cow,elephant,horse,human,macaque,marmoset,orangutan,panda,pig,rabbit, antisense antisense A549@0.0825285,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0.0044575,HMEC@0,HSMM@0,HUVEC@0,K562@0.009715,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0.004755, 0 0 0 0 ENSG00000254516.1 ENST00000532562.1 chr11:37960151-37976213 3 373 15685 intergenic -3.14 0 0,0,0 0 0,0,0 0 3.82684093082563 0 0 9.53203697800446 0 0 12.4908511316544 0 0 0 chimp,cow,horse,human,macaque,orangutan, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0.005347,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000255477.1 ENST00000526554.1 chr11:38520545-38521736 2 508 681 intergenic 0.65 0 0,0,0 0 0,0,0 0 0 0 0 0 0 0 0 0 0 0 NA lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0.041631,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0.0358365,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000255175.1 ENST00000529017.1 chr11:38639814-38667898 5 424 27652 intergenic -2.54 0 0,0,0 0 0,0,0 0 6.24146535512802 0 0 14.0440112830898 2.295 0 15.2001663532475 2.331 0 0 chimp,human,macaque,marmoset,orangutan,panda, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000255175.1 ENST00000531882.1 chr11:38639879-38667906 5 472 27547 intergenic -2.54 0 0,0,0 0 0,0,0 0 6.26525574472719 0 0 14.0975423821106 2.295 0 15.2581043307801 2.331 0 0 chimp,human,macaque,marmoset,orangutan,panda, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000254562.1 ENST00000533575.1 chr11:38668026-38695791 4 577 27182 intergenic 1.46 0 0,0,1 0 0,0,0 0 7.42406739754249 0 0 5.84864984180708 0 0 8.05227724229269 0 1 1 chimp,human,macaque,marmoset,orangutan, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000254562.1 ENST00000530102.1 chr11:38670314-38688407 3 457 17632 intergenic -4.66 0 0,1,0 0 0,0,0 0 11.4451565335753 0 0 8.88628629764066 0 0 12.2814201451906 0 0 0 chimp,cow,dog,elephant,guinea_pig,human,macaque,marmoset,orangutan, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000254562.1 ENST00000534756.1 chr11:38670408-38676802 3 506 5884 intergenic -2.85 0 0,0,0 0 0,0,0 0 23.361658735554 0 21.598814229249 10.9881033310673 0 24.2905138339921 18.9977906186268 0 0 0 cat,chimp,dog,elephant,guinea_pig,horse,human,macaque,marmoset,mouse,opossum,orangutan,rabbit,rat, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000255132.1 ENST00000524493.1 chr11:41416145-41448054 3 575 31330 intronic 1.94 0 0,1,1 0 0,0,0 36.0347826086957 24.2933290775614 76.937 6.33391304347826 27.9792531120332 92.688 6.5704347826087 30.0999042451325 130.504 0 0 chimp,elephant,guinea_pig,horse,human,macaque,marmoset,orangutan,panda,pig, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@1.36423,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000255388.1 ENST00000526978.1 chr11:41540445-41735998 7 852 194689 intergenic 7.61 0 0,0,0 0 0,0,0 0 4.2930828141292 23.936 4.63028169014085 8.94094170703019 0 5 11.7194654037978 0 0 0 chimp,horse,human,macaque,marmoset,orangutan, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0.005006, 0 0 0 0 ENSG00000255388.1 ENST00000531210.1 chr11:41608285-41733958 3 451 125218 intergenic -4.12 0 0,0,0 0 0,0,0 0 4.33852960436998 0 0 9.82182274113945 0 0 11.2513935696146 0 1 1 chimp,human,macaque,marmoset,orangutan, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0.005006, 0 0 0 0 ENSG00000255171.1 ENST00000528720.1 chr11:41736118-41857992 6 547 121317 intergenic 2.40 0 0,0,0 0 0,0,0 0 2.65290107734283 0 0 3.20976450126528 0 4.44241316270567 4.99708202477806 0 0 0 chimp,elephant,horse,human,macaque,marmoset,mouse,orangutan,pig,rat, processed_transcript processed_transcript A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000255171.1 ENST00000529282.1 chr11:41736540-41847772 6 557 110665 intergenic 2.40 0 0,0,0 0 0,0,0 0 2.69196222834681 23.936 0 3.51871865540144 0 0 5.33614964080784 0 0 0 chimp,horse,human,macaque,marmoset,mouse,orangutan,pig,rat, processed_transcript processed_transcript A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000255171.1 ENST00000530379.1 chr11:41741993-41756304 2 553 13756 intergenic -2.76 0 0,1,0 0 0,0,0 0 7.33810700785112 0 16.7179023508137 9.33163710380925 0 40.8679927667269 10.7969613259669 0 0 0 cat,chimp,cow,dog,guinea_pig,horse,human,macaque,marmoset,orangutan,pig,rabbit, processed_transcript processed_transcript A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000255279.1 ENST00000532199.1 chr11:41877470-41883380 3 492 5414 intergenic -4.67 0 0,0,1 0 0,0,0 0 0 0 0 1.30679719246398 0 0 1.81603250831178 0 1 1 chimp,human,macaque,marmoset,orangutan, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000255279.1 ENST00000526179.1 chr11:41877896-41897547 2 429 19220 intergenic 0 0 0,0,0 0 0,0,0 0 8.04594172736733 0 0 13.75296566077 0 0 13.9679500520291 0 0 0 human, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000255279.1 ENST00000530946.1 chr11:41881393-41883880 3 530 1953 intergenic -1.41 0 0,0,0 0 0,0,0 0 0 0 0 0 4.78 0 0 7.447 0 0 chimp,elephant,horse,human,macaque,orangutan, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000254822.1 ENST00000526455.1 chr11:41898184-41898628 2 268 174 intergenic -1.95 0 0,1,0 0 0,0,0 0 0 0 0 0 12.144 8.89925373134328 0 258.592 0 0 chimp,cow,elephant,guinea_pig,horse,human,macaque,marmoset,orangutan,panda,pig,rabbit, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000255300.1 ENST00000527828.1 chr11:42014935-42107008 4 580 91487 intergenic -3.30 0 0,0,0 0 0,0,0 40.0086206896552 15.7744269677659 162.87 112.934482758621 21.5159968082897 168.694 251.8 23.0711795118432 168.676 0 0 chimp,cow,dog,elephant,guinea_pig,horse,human,macaque,marmoset,mouse,opossum,orangutan,panda,pig,rabbit,rat, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000255300.1 ENST00000534059.1 chr11:42090125-42185401 5 620 94648 intergenic -2.26 0 0,0,0 0 0,0,0 15.1693548387097 7.73228171752177 0 37.4322580645161 12.0647768574085 0 38.0322580645161 13.0813857662074 0 0 0 chimp,cow,dog,elephant,guinea_pig,horse,human,macaque,marmoset,mouse,orangutan,panda,pig,rabbit, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000255109.1 ENST00000525641.1 chr11:42204842-42261369 4 443 56078 intergenic -13.14 0 0,0,0 0 0,0,0 0 7.08513142408788 6.82 6.09480812641084 8.59279931523949 0 5.87133182844244 12.5930133028995 0 1 1 chimp,human,macaque,marmoset,orangutan, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000255109.1 ENST00000530387.1 chr11:42204847-42261285 5 457 55973 intergenic -2.75 0 0,0,0 0 0,0,0 0 7.09842245368303 0 5.90809628008753 8.6089185857467 0 5.69146608315098 12.6166365926429 0 1 1 chimp,human,macaque,marmoset,orangutan, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000255109.1 ENST00000527757.1 chr11:42236345-42275262 5 541 38368 intergenic -13.14 0 0,0,0 0 0,0,0 0 12.2645694328607 0 4.99075785582255 11.4943703085905 0 4.80776340110906 11.9326522101751 0 1 1 chimp,human,macaque,marmoset,orangutan, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000254907.1 ENST00000526220.1 chr11:43350298-43380846 4 783 29759 exonic -5.56 0 0,1,1 0 0,0,0 117.915708812261 44.6865150038644 19.61 161.716475095785 44.4912463456433 46.2 178.974457215837 43.275950132733 43.369 0 0 chimp,human,macaque,marmoset,orangutan,rat, antisense antisense A549@0.016797,AG04450@0.0081945,BJ@0,GM12878@0.014864,H1HESC@0,HELAS3@0.0067445,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0.0127645,MCF7@0.098543,NHEK@0.009788,NHLF@0,SKNSHRA@0.0609165, 0 0 0 0 ENSG00000255340.1 ENST00000530042.1 chr11:43400432-43407221 2 442 6345 exonic 0 0 0,1,0 0 0,0,0 41.3642533936652 3.5558707643814 0 66.5158371040724 6.32828999211978 0 68.1606334841629 10.1750985027581 0 0 0 chimp,cow,dog,elephant,guinea_pig,horse,human,macaque,marmoset,orangutan,panda,pig,rabbit, antisense antisense A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000254577.1 ENST00000394183.2 chr11:43411833-43417045 2 181 5029 intronic -6.42 0 0,0,0 0 0,0,0 0 36.3861602704315 107.124 0 38.6730960429509 121.667 0 45.4247365281368 117.596 0 1 chimp,human,orangutan, processed_transcript processed_transcript A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0.016808,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000246250.2 ENST00000499066.2 chr11:43851259-43855467 2 2188 2018 exonic 2.26 0 0,1,0 0 0,0,0 147.627056672761 0 133.578 117.852833638026 1.65807730426165 151.28 118.058043875686 3.90882061446977 115.374 0 0 cat,chimp,cow,dog,elephant,guinea_pig,horse,human,macaque,marmoset,orangutan,panda,rabbit,rat, antisense non_coding A549@0,AG04450@0.011385,BJ@0,GM12878@0.0110125,H1HESC@0,HELAS3@0.0020985,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0.000889667,NHLF@0.009772,SKNSHRA@0.0562545, 0 0 0 0 ENSG00000246250.2 ENST00000524643.1 chr11:43854605-43855492 2 702 183 intronic 0.57 0 0,1,1 0 0,0,0 133.042735042735 0 120.003 138.823361823362 0 134.155 102.269230769231 0 99.799 0 0 chimp,dog,elephant,guinea_pig,horse,human,macaque,marmoset,orangutan,panda,rat, antisense antisense A549@0,AG04450@0.011385,BJ@0,GM12878@0.0110125,H1HESC@0,HELAS3@0.0020985,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0.000889667,NHLF@0.009772,SKNSHRA@0.0562545, 0 0 0 0 ENSG00000246250.2 ENST00000530450.1 chr11:43854722-43902276 4 589 46959 intronic 3.84 0 0,0,0 0 0,0,0 0 12.5900040460828 0 0.811544991511036 15.8498264443451 2.918 0.825127334465195 16.2796482037522 5.834 1 1 chimp,human,macaque,marmoset,orangutan, antisense antisense A549@0,AG04450@0.011385,BJ@0,GM12878@0.0110125,H1HESC@0,HELAS3@0.0020985,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0.000889667,NHLF@0.009772,SKNSHRA@0.0562545, 0 0 0 0 ENSG00000246250.2 ENST00000528765.1 chr11:43896109-43899623 2 460 3052 intergenic 3.84 0 0,0,0 0 0,0,0 0 0 0 0 0 0 0 0 0 0 0 cat,chimp,cow,elephant,guinea_pig,horse,human,macaque,marmoset,orangutan,panda,pig,rabbit, antisense antisense A549@0,AG04450@0.011385,BJ@0,GM12878@0.0110125,H1HESC@0,HELAS3@0.0020985,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0.000889667,NHLF@0.009772,SKNSHRA@0.0562545, 0 0 0 0 ENSG00000244926.2 ENST00000499194.1 chr11:43930842-43942476 6 1900 9724 intronic -1.28 0 0,0,0 0 0,0,0 12.3157894736842 13.0304401480872 0 13.1131578947368 19.7091731797614 13.399 14.2010526315789 21.0669477581242 11.219 0 0 chimp,cow,horse,human,macaque,marmoset,orangutan,rabbit, antisense non_coding A549@0,AG04450@0.005412,BJ@0,GM12878@0.0041795,H1HESC@0.0010885,HELAS3@0.0097035,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0.00589533,NHLF@0,SKNSHRA@0.018963, 0 0 0 0 ENSG00000244926.2 ENST00000528285.1 chr11:43933812-43942494 4 446 8230 intronic -1.22 0 0,0,0 0 0,0,0 52.4663677130045 15.3958687727825 0 41.1995515695067 23.3380315917375 13.399 47.1143497757847 24.8437424058323 11.219 0 0 cat,chimp,cow,horse,human,macaque,marmoset,mouse,orangutan,rat, antisense antisense A549@0,AG04450@0.005412,BJ@0,GM12878@0.0041795,H1HESC@0.0010885,HELAS3@0.0097035,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0.00589533,NHLF@0,SKNSHRA@0.018963, 0 0 0 0 ENSG00000244926.2 ENST00000534287.1 chr11:43933866-43942409 4 538 7999 intronic -0.23 0 0,0,0 0 0,0,0 43.4944237918216 15.8404800600075 0 46.0315985130111 22.1540192524066 21.871 64.775092936803 22.7093386673334 20.195 0 0 cat,chimp,cow,elephant,guinea_pig,horse,human,macaque,marmoset,mouse,orangutan,panda,rabbit,rat, antisense antisense A549@0,AG04450@0.005412,BJ@0,GM12878@0.0041795,H1HESC@0.0010885,HELAS3@0.0097035,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0.00589533,NHLF@0,SKNSHRA@0.018963, 0 0 0 0 ENSG00000244926.2 ENST00000527960.1 chr11:43933997-43942444 2 545 7900 intronic 5.72 0 0,0,0 0 0,0,0 55.045871559633 15.2415189873418 0 62.8 21.3288607594937 21.165 85.7357798165138 21.5870886075949 19.447 0 0 cat,chimp,cow,dog,elephant,human,macaque,marmoset,mouse,orangutan,panda,rabbit,rat, antisense antisense A549@0,AG04450@0.005412,BJ@0,GM12878@0.0041795,H1HESC@0.0010885,HELAS3@0.0097035,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0.00589533,NHLF@0,SKNSHRA@0.018963, 0 0 0 0 ENSG00000244953.1 ENST00000501541.1 chr11:43965337-43968756 2 2043 1374 exonic 3.94 0 0,0,0 0 0,0,0 22.942731277533 0 0 31.0513950073421 0 6.684 23.5017131669114 0 9.949 0 1 human,macaque,orangutan, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0.0324335,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0.007318,HUVEC@0,K562@0.007555,MCF7@0,NHEK@0.00129133,NHLF@0,SKNSHRA@0.195393, 0 0 0 0 ENSG00000255165.1 ENST00000531268.1 chr11:44093012-44093953 2 462 477 intronic -2.37 0 0,0,0 0 0,0,0 0 0 7.106 0 0 33.723 0 0 37.6 1 1 chimp,human,macaque,marmoset,orangutan, sense_intronic sense_intronic A549@0.0321385,AG04450@0.0060535,BJ@0.004012,GM12878@0.0883485,H1HESC@0.0057775,HELAS3@0.003708,HEPG2@0.00202,HMEC@0,HSMM@0,HUVEC@0,K562@0.053183,MCF7@0,NHEK@0.00921767,NHLF@0,SKNSHRA@0.0338495, 1 96 0 0 ENSG00000255451.1 ENST00000528183.1 chr11:44490014-44491979 3 517 1444 intergenic 6.00 0 0,1,0 0 0,0,0 0 0 0 0 0 0 0 0 0 0 0 chimp,dog,human,macaque,marmoset,orangutan,panda, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0.0079785,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0.0573117,NHLF@0,SKNSHRA@0.0087265, 0 0 0 0 ENSG00000254693.1 ENST00000533814.1 chr11:44626058-44626887 2 541 286 exonic 14.04 0 0,1,1 0 0,0,0 21.1460258780037 0 0 73.3031423290203 0 38.076 99.6635859519409 0 38.341 0 0 chimp,guinea_pig,human,macaque,marmoset,orangutan,panda,rabbit, antisense antisense A549@0.007995,AG04450@0,BJ@0.0044565,GM12878@0,H1HESC@0,HELAS3@0.0377905,HEPG2@0.0150705,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000255092.1 ENST00000532524.1 chr11:44627720-44629651 4 563 1362 intronic 0.63 0 0,1,0 0 0,0,0 0 0 0 0 0 5.194 0 0 8.308 0 0 chimp,cow,human,macaque,marmoset,orangutan, antisense antisense A549@0.0038285,AG04450@0.0120595,BJ@0,GM12878@0,H1HESC@0,HELAS3@0.141151,HEPG2@0.0192435,HMEC@0,HSMM@0,HUVEC@0,K562@0.004722,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000255079.1 ENST00000532748.1 chr11:44716413-44717851 2 787 649 intergenic -2.87 0 0,0,0 0 0,0,0 0 0 0 0 0 3.06 0 0 3.18 0 0 chimp,elephant,human,macaque,marmoset,orangutan, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0.0059415,H1HESC@0.0052585,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0.0061635,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0.054661, 0 0 0 0 ENSG00000255032.1 ENST00000530039.1 chr11:44740942-44758242 3 625 16671 intronic 3.84 0 0,0,0 0 0,0,0 0 6.14504228900486 0 0 13.8452402375382 2.89 0 14.5628936476516 2.89 0 0 cow,elephant,human,marmoset, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000254654.1 ENST00000525114.1 chr11:44995453-44999579 4 1235 2885 intergenic -5.27 1 0,1,0 0 0,0,0 0 0 8.184 4.54251012145749 0.662738301559792 25.227 4.61376518218623 0.673830155979203 25.002 1 1 chimp,human,macaque,marmoset,orangutan, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0.004955,NHEK@0.026016,NHLF@0,SKNSHRA@0.0044885, 0 0 0 0 ENSG00000246343.1 ENST00000499027.1 chr11:45168194-45236289 2 1864 66229 exonic 1.06 0 1,1,1 0 0,0,0 67.1824034334764 23.739056908605 22.32 87.5954935622318 25.159643056667 25.484 84.7805793991416 24.7950444669254 23.502 0 0 chimp,elephant,human,macaque,orangutan,pig, lincRNA lincRNA A549@0,AG04450@0.009436,BJ@0.0034685,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0.001645,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000214934.3 ENST00000534751.1 chr11:45230762-45236264 2 2328 3172 intronic 15.10 0 1,1,1 0 0,1,0 166.056701030928 13.0129255989912 268.95 94.5210481099656 19.4744640605296 284.495 86.0128865979381 20.3732660781841 234.297 0 0 chimp,dog,elephant,human,macaque,marmoset,orangutan,pig, processed_transcript processed_transcript A549@0.773023,AG04450@0.577395,BJ@0.664363,GM12878@0.075762,H1HESC@0.481625,HELAS3@1.85153,HEPG2@0.666396,HMEC@0.327054,HSMM@0.443338,HUVEC@1.61033,K562@0.069214,MCF7@0.781729,NHEK@0.550487,NHLF@0.745202,SKNSHRA@0.436856, 0 0 0 0 ENSG00000254664.1 ENST00000527450.1 chr11:45237366-45256843 2 565 18910 intronic -4.24 0 0,0,0 0 0,0,0 15.0530973451327 131.932734003173 32.033 0 117.343945002644 0 2.15044247787611 120.448334214701 0 0 0 chimp,dog,guinea_pig,horse,human,macaque,marmoset,mouse,orangutan,panda,pig, antisense antisense A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000254497.1 ENST00000531663.1 chr11:45275435-45276134 2 421 276 exonic 2.66 0 0,0,1 0 0,0,0 121.942992874109 0 0 162.598574821853 0 1.38 165.225653206651 0 1.458 0 0 cat,chimp,cow,dog,guinea_pig,horse,human,macaque,marmoset,opossum,orangutan,panda,pig, antisense antisense A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0.004904,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000254497.1 ENST00000534342.1 chr11:45275533-45276200 3 446 217 exonic 2.66 0 0,0,1 0 0,0,0 33.7533632286995 165.428571428571 0 51.1726457399103 207.603686635945 0 54.3318385650224 206.152073732719 0 0 0 cat,chimp,human,macaque,marmoset,orangutan, antisense antisense A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0.004904,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000254427.1 ENST00000524410.1 chr11:45376922-45387672 2 603 10145 intergenic 2.92 0 0,0,0 1 0,0,0 4.80597014925373 21.9921143420404 21.51 3.43117744610282 17.276490882208 23.67 3.84577114427861 19.2611138491868 24.48 0 0 cat,horse,human,macaque,marmoset,orangutan, lincRNA lincRNA A549@0.322831,AG04450@0.02515,BJ@0.017753,GM12878@0.166753,H1HESC@0.118249,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0.0957295,HUVEC@0.00962,K562@0.022296,MCF7@0.200605,NHEK@0,NHLF@0.002213,SKNSHRA@1.36106, 0 0 0 0 ENSG00000254427.1 ENST00000524488.1 chr11:45377051-45378204 2 359 792 intergenic -2.17 0 1,1,1 1 0,0,0 0 0 21.51 0 2.11237373737374 23.67 10.2841225626741 2.21843434343434 24.48 0 0 chimp,cow,dog,elephant,guinea_pig,horse,human,macaque,marmoset,orangutan,panda,pig,platypus,rabbit,rat, lincRNA lincRNA A549@0.322831,AG04450@0.02515,BJ@0.017753,GM12878@0.166753,H1HESC@0.118249,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0.0957295,HUVEC@0.00962,K562@0.022296,MCF7@0.200605,NHEK@0,NHLF@0.002213,SKNSHRA@1.36106, 0 0 0 0 ENSG00000254427.1 ENST00000524565.1 chr11:45377052-45378199 2 870 275 intergenic -2.17 0 1,1,1 1 0,0,0 0 0 21.51 1.92298850574713 0 23.67 6.2632183908046 0 24.48 0 0 cat,chimp,cow,dog,elephant,guinea_pig,horse,human,macaque,marmoset,orangutan,panda,pig, lincRNA lincRNA A549@0.322831,AG04450@0.02515,BJ@0.017753,GM12878@0.166753,H1HESC@0.118249,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0.0957295,HUVEC@0.00962,K562@0.022296,MCF7@0.200605,NHEK@0,NHLF@0.002213,SKNSHRA@1.36106, 0 0 0 0 ENSG00000255267.1 ENST00000528390.1 chr11:45392948-45410059 5 2592 14511 intergenic 9.10 0 0,0,1 0 0,1,0 6.13425925925926 12.6465440011026 0 8.03780864197531 11.03666184274 11.625 8.23996913580247 12.1365171249397 12.347 0 1 chimp,human,macaque,orangutan, lincRNA processed_transcript A549@0.0012985,AG04450@0,BJ@0,GM12878@0.0041935,H1HESC@0.0577295,HELAS3@0,HEPG2@0.003351,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0.0269523,NHLF@0,SKNSHRA@0.0189955, 0 0 0 0 ENSG00000255041.1 ENST00000528445.1 chr11:45408766-45535352 3 603 125979 intergenic -2.35 0 0,0,0 0 0,0,0 0 9.61337206994817 0 0 9.28636518784877 0 0 12.9545162288953 174.42 0 0 cat,chimp,dog,horse,human,macaque,marmoset,orangutan,panda,pig, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000254651.1 ENST00000534604.1 chr11:45420998-45422078 2 559 519 intergenic 3.82 0 0,1,0 0 0,0,0 0 0 0 9.17710196779964 0 0 10.5026833631485 0 261.303 0 0 chimp,elephant,horse,human,macaque,orangutan, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0.005213,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0.0170253,NHLF@0,SKNSHRA@0.028767, 0 0 0 0 ENSG00000254746.1 ENST00000533315.1 chr11:45511239-45564024 5 568 52209 intergenic 1.74 0 0,0,0 0 0,0,0 51.25 10.5224386600011 0 9.00176056338028 9.25378766113122 1.785 10.5211267605634 14.9156084200042 2.331 0 0 cat,chimp,guinea_pig,human,macaque,marmoset,orangutan, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000254746.1 ENST00000527642.1 chr11:45511249-45564024 6 562 52203 intergenic -4.54 0 0,0,0 0 0,0,0 45.4804270462633 10.5236480662031 0 9.09786476868327 9.25485125375936 1.785 10.6334519572954 14.9173227592284 2.331 0 0 chimp,elephant,human,macaque,marmoset,orangutan, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000254746.1 ENST00000529127.1 chr11:45552766-45555084 4 876 1436 intergenic 1.74 0 0,0,1 0 0,0,0 0 0 96.35 0 0 69.966 0 0 89.6 1 1 chimp,human,macaque,marmoset,orangutan, lincRNA retained_intron A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000254746.1 ENST00000525855.1 chr11:45552870-45564023 4 568 10579 intergenic -4.54 0 0,0,0 0 0,0,0 0 22.2312127800359 0 0 19.4023064561868 1.785 0 20.8093392570186 2.331 1 1 chimp,human,macaque,marmoset,orangutan, lincRNA retained_intron A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000254514.1 ENST00000525926.1 chr11:45604075-45605024 2 562 385 intergenic 4.12 0 0,1,1 0 0,0,0 0 0 0 0 0 0 0 0 0 0 0 chimp,elephant,human,macaque,orangutan, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000255091.1 ENST00000525563.1 chr11:45673079-45674241 2 247 913 exonic 0 0 0,1,0 0 0,0,0 0 13.0996714129244 282.438 13.417004048583 7.01533406352683 240.32 13.5506072874494 7.10733844468784 270.011 0 0 cat,chimp,dog,elephant,human,macaque,marmoset,orangutan,panda,pig, antisense antisense A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000254519.1 ENST00000532307.1 chr11:45743858-45745849 3 538 1449 intergenic -0.46 0 0,0,1 0 0,0,0 0 0 0 12.1096654275093 3.40924775707384 15.699 6.68029739776952 3.56383712905452 17.688 0 0 cat,chimp,human,macaque,marmoset,orangutan, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000254519.1 ENST00000530051.1 chr11:45743951-45746102 3 540 1607 intergenic -6.25 1 0,0,1 0 0,0,0 0 0 0 31.0907407407407 4.99128811449907 13.425 29.8148148148148 3.99439950217797 15.432 0 0 cat,chimp,cow,dog,elephant,guinea_pig,horse,human,macaque,marmoset,orangutan,panda,pig, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000254519.1 ENST00000529769.1 chr11:45744859-45765801 4 874 20062 intergenic -0.46 0 0,0,1 0 0,0,0 0 21.4971588076961 0 8.02173913043478 21.9913268866514 0 4.68649885583524 21.6110058817665 0 0 0 chimp,guinea_pig,human,macaque,marmoset,orangutan, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000255426.1 ENST00000532068.1 chr11:45755545-45757317 2 858 912 intergenic 4.92 0 0,0,0 0 0,0,0 0 0 0 3.46153846153846 33.0899122807018 0 3.56410256410256 28.655701754386 0 0 0 cat,chimp,cow,dog,elephant,horse,human,macaque,mouse,orangutan,panda,pig,rat, lincRNA lincRNA A549@0,AG04450@0,BJ@0.0057255,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000255226.1 ENST00000531982.1 chr11:45772374-45773422 2 532 514 intergenic 9.39 0 0,0,0 0 0,0,0 0 51.0408560311284 0 0 96.3929961089494 0 0 90.7237354085603 1.41 0 0 cat,chimp,cow,dog,horse,human,macaque,marmoset,orangutan,panda,pig, antisense antisense A549@0.0051725,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000255226.1 ENST00000526225.1 chr11:45772657-45773124 2 164 301 intergenic 0 0 0,0,0 0 0,0,0 0 0 26.235 0 0 49.546 0 0 48.042 0 0 cat,chimp,dog,horse,human,macaque,marmoset,orangutan,panda,pig, antisense antisense A549@0.0051725,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000255447.1 ENST00000534128.1 chr11:45834770-45846809 3 466 11569 intergenic -1.28 0 0,0,1 0 0,0,0 0 6.48240988849512 0 0 1.46927132855044 0 0 8.52052899991356 0 1 1 chimp,human,macaque,marmoset,orangutan, lincRNA lincRNA A549@0,AG04450@0,BJ@0.0138,GM12878@0,H1HESC@0,HELAS3@0.0169765,HEPG2@0.004543,HMEC@0,HSMM@0,HUVEC@0,K562@0.004951,MCF7@0.004384,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000255498.1 ENST00000533218.1 chr11:45927492-45928012 2 407 111 exonic 0 0 0,1,0 0 0,0,0 79.2972972972973 70.8648648648649 27.599 93.002457002457 0 86.455 79.6977886977887 0 66.681 0 0 cat,chimp,cow,dog,elephant,guinea_pig,horse,human,macaque,marmoset,mouse,orangutan,panda,pig,rabbit,rat, antisense antisense A549@0.092677,AG04450@0.142036,BJ@0.16631,GM12878@0.0702,H1HESC@0.0751205,HELAS3@0.473874,HEPG2@0.55677,HMEC@0.010011,HSMM@0.033441,HUVEC@0.112636,K562@0.029369,MCF7@0.0968525,NHEK@0.134129,NHLF@0.0236945,SKNSHRA@0.389911, 0 0 0 0 ENSG00000254653.1 ENST00000528480.1 chr11:46138129-46138869 2 603 135 intronic 0 0 0,1,0 0 0,0,0 13.4991708126036 0 154.222 109.761194029851 0 111.265 131.810945273632 0 91.372 0 0 chimp,guinea_pig,horse,human,macaque,marmoset,orangutan,pig, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0.0137155,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0.003838,MCF7@0,NHEK@0,NHLF@0.0063785,SKNSHRA@0, 0 0 0 0 ENSG00000255314.1 ENST00000533793.1 chr11:46193498-46198656 3 938 4216 intergenic -2.36 1 1,1,1 0 0,0,0 17.3475479744136 9.82352941176471 31.28 16.728144989339 6.82542694497154 38.103 18.0479744136461 12.5647533206831 57.279 0 0 chimp,elephant,horse,human,macaque,marmoset,orangutan,pig, lincRNA lincRNA A549@0.028938,AG04450@0,BJ@0,GM12878@0.11571,H1HESC@0.0435865,HELAS3@0,HEPG2@0.002264,HMEC@0,HSMM@0,HUVEC@0,K562@0.15698,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000255269.1 ENST00000530941.1 chr11:46235372-46237409 2 534 1501 intergenic 0.04 0 0,0,0 0 0,0,0 0 0 157.388 97.1910112359551 1.072618254497 191.412 101.994382022472 1.13324450366422 189.343 0 0 cat,chimp,cow,dog,elephant,horse,human,macaque,orangutan,panda, lincRNA lincRNA A549@0,AG04450@0.0041815,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000254639.1 ENST00000530049.1 chr11:46259933-46260818 2 651 232 intergenic -0.08 0 0,1,1 0 0,0,0 194.500768049155 193.771551724138 15.376 480.774193548387 204.034482758621 21.494 505.133640552995 184.646551724138 27.805 0 0 cat,chimp,cow,dog,elephant,guinea_pig,human,macaque,marmoset,mouse,orangutan,panda,pig,rabbit,rat, lincRNA lincRNA A549@0.390571,AG04450@0.19158,BJ@0.155419,GM12878@0,H1HESC@0.105106,HELAS3@2.15176,HEPG2@0.56393,HMEC@0.068975,HSMM@0.142677,HUVEC@0.222023,K562@1.24233,MCF7@0.009446,NHEK@0.156978,NHLF@1.1088,SKNSHRA@0.220772, 0 0 0 0 ENSG00000255007.1 ENST00000527239.1 chr11:46277906-46296098 2 352 17838 intergenic -0.51 0 0,0,1 0 0,0,0 0 29.8280636842695 9.12 32.5397727272727 32.6454198901222 31.158 35.2897727272727 30.7308554770714 21.851 0 0 cat,cow,dog,elephant,horse,human,marmoset,panda,pig, antisense antisense A549@0,AG04450@0.0329425,BJ@0.041016,GM12878@0.03218,H1HESC@0,HELAS3@0.0321335,HEPG2@0,HMEC@0,HSMM@0.032197,HUVEC@0,K562@0.126002,MCF7@0,NHEK@0.003606,NHLF@0.038583,SKNSHRA@0.142041, 0 0 0 0 ENSG00000247675.2 ENST00000531719.1 chr11:46867963-46895064 4 727 26368 exonic 3.64 0 0,1,1 1 0,0,0 199.588720770289 32.3410194174757 93.587 223.977991746905 45.6812803398058 119.853 217.944979367263 44.2902002427185 123.116 0 0 cat,chimp,dog,guinea_pig,horse,human,macaque,marmoset,mouse,orangutan,panda,rabbit, lincRNA processed_transcript A549@0.108744,AG04450@0.020832,BJ@0.017762,GM12878@0.0332855,H1HESC@0.144335,HELAS3@0.02162,HEPG2@0.128832,HMEC@0.722309,HSMM@0.026232,HUVEC@0.0032335,K562@0.0335825,MCF7@0.195433,NHEK@0.0690957,NHLF@0.165212,SKNSHRA@0.143089, 0 0 0 0 ENSG00000247675.2 ENST00000502049.2 chr11:46867978-46895947 3 1501 26464 exonic 8.32 0 1,1,1 1 0,0,0 130.876748834111 32.223700120919 93.587 147.29380413058 45.5155683192261 119.853 139.477015323118 44.1295344619105 123.116 0 0 chimp,guinea_pig,human,macaque,marmoset,orangutan,rabbit, lincRNA processed_transcript A549@0.108744,AG04450@0.020832,BJ@0.017762,GM12878@0.0332855,H1HESC@0.144335,HELAS3@0.02162,HEPG2@0.128832,HMEC@0.722309,HSMM@0.026232,HUVEC@0.0032335,K562@0.0335825,MCF7@0.195433,NHEK@0.0690957,NHLF@0.165212,SKNSHRA@0.143089, 0 0 0 0 ENSG00000255520.1 ENST00000532022.1 chr11:47144655-47152352 2 330 7365 intronic 1.48 0 0,0,1 0 0,0,0 143.727272727273 26.2397827562797 112.71 94.0454545454545 31.8416836388323 67.885 128.763636363636 31.5538357094365 48.224 0 0 chimp,cow,dog,elephant,horse,human,macaque,marmoset,mouse,orangutan,pig, antisense antisense A549@0,AG04450@0,BJ@0,GM12878@0.006072,H1HESC@0.0062485,HELAS3@0.0070395,HEPG2@0.012971,HMEC@0,HSMM@0,HUVEC@0,K562@0.0080645,MCF7@0.0122485,NHEK@0.003845,NHLF@0,SKNSHRA@0.0136675, 0 0 0 0 ENSG00000256897.1 ENST00000540410.1 chr11:47241769-47243302 2 608 923 intronic -2.60 0 0,0,0 0 0,0,0 0 0 0 0 0 0 0 0 0 0 0 cat,chimp,dog,elephant,horse,human,macaque,marmoset,orangutan,panda,rabbit, antisense antisense A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0.0158365,K562@0.0080525,MCF7@0,NHEK@0.0529147,NHLF@0,SKNSHRA@0.0162575, 0 0 0 0 ENSG00000256746.1 ENST00000543925.1 chr11:47292208-47293661 3 419 1030 intronic 3.14 0 0,0,0 0 0,0,0 105.162291169451 0.615533980582524 69.225 152.08830548926 4.25436893203883 89.677 150.551312649165 3.97087378640777 80.057 0 0 cat,chimp,cow,dog,elephant,guinea_pig,horse,human,macaque,marmoset,mouse,opossum,orangutan,panda,pig,rat, antisense antisense A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0.0063445,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000256746.1 ENST00000545474.1 chr11:47292217-47293626 3 489 916 intronic 3.14 0 0,0,0 0 0,0,0 90.1083844580777 0.692139737991266 69.225 133.867075664622 2.88864628820961 89.677 129 4.46506550218341 80.057 0 0 cat,chimp,cow,dog,elephant,guinea_pig,horse,human,macaque,marmoset,mouse,opossum,orangutan,panda,pig,rabbit,rat, antisense antisense A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0.0063445,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000255197.1 ENST00000527426.1 chr11:47404699-47417191 2 834 11656 intergenic -3.27 0 0,0,0 0 0,0,0 27.7541966426859 28.8941317776253 2.93 62.9904076738609 45.0813315030885 65.149 62.3980815347722 43.1077556623199 64.831 0 0 cat,chimp,elephant,horse,human,macaque,marmoset,orangutan,rat, antisense antisense A549@0.016453,AG04450@0.152514,BJ@0.156793,GM12878@0.013587,H1HESC@0.008037,HELAS3@0.03409,HEPG2@0.0517925,HMEC@0.036287,HSMM@0.693454,HUVEC@0.979285,K562@0,MCF7@0.040334,NHEK@0.168767,NHLF@0.659438,SKNSHRA@0.0475105, 0 0 0 0 ENSG00000255197.1 ENST00000532943.1 chr11:47404800-47430643 4 847 24990 intronic 0.70 0 0,1,0 0 0,0,0 5.53482880755608 20.1039615846339 108.173 14.9409681227863 39.5324929971989 83.323 14.8040141676505 38.3810324129652 67.313 0 0 horse,human,macaque,marmoset,orangutan,pig, antisense antisense A549@0.016453,AG04450@0.152514,BJ@0.156793,GM12878@0.013587,H1HESC@0.008037,HELAS3@0.03409,HEPG2@0.0517925,HMEC@0.036287,HSMM@0.693454,HUVEC@0.979285,K562@0,MCF7@0.040334,NHEK@0.168767,NHLF@0.659438,SKNSHRA@0.0475105, 0 0 0 0 ENSG00000255197.1 ENST00000532340.1 chr11:47405095-47430741 3 563 25079 intronic 0.11 0 0,1,1 0 0,0,0 22.3783303730018 20.2312293153634 143.007 17.1190053285968 39.9345667690099 112.891 14.1154529307282 38.7822879700148 90.86 0 0 cat,chimp,horse,human,macaque,marmoset,orangutan,rabbit, antisense antisense A549@0.016453,AG04450@0.152514,BJ@0.156793,GM12878@0.013587,H1HESC@0.008037,HELAS3@0.03409,HEPG2@0.0517925,HMEC@0.036287,HSMM@0.693454,HUVEC@0.979285,K562@0,MCF7@0.040334,NHEK@0.168767,NHLF@0.659438,SKNSHRA@0.0475105, 0 0 0 0 ENSG00000254879.1 ENST00000533964.1 chr11:48035958-48037407 2 299 1148 intronic 1.62 0 0,0,0 0 0,0,0 0 9.21602787456446 0 0 12.3074912891986 7.312 0 12.6872822299652 8.4 0 0 NA antisense antisense A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000254518.1 ENST00000525654.1 chr11:50257750-50261299 2 522 3025 intergenic -1.07 0 0,1,0 0 0,0,0 0 0 0 0 0 0 64.7509578544061 74.1738842975207 210.19 1 1 chimp,human,macaque,marmoset,orangutan, lincRNA lincRNA A549@0,AG04450@0,BJ@0.117301,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0.555961,MCF7@0,NHEK@0.004611,NHLF@0,SKNSHRA@1.57736, 0 0 0 0 ENSG00000254518.1 ENST00000529219.1 chr11:50257789-50263827 3 497 5537 intergenic -1.07 0 0,1,0 0 0,0,0 0 0 0 0 0 0 68.0080482897384 40.523026909879 195.448 1 1 chimp,human,macaque,marmoset,orangutan, lincRNA lincRNA A549@0,AG04450@0,BJ@0.117301,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0.555961,MCF7@0,NHEK@0.004611,NHLF@0,SKNSHRA@1.57736, 0 0 0 0 ENSG00000254804.1 ENST00000528000.1 chr11:55451617-55453636 2 343 1674 intergenic -1.64 0 0,0,0 0 0,0,0 0 0 0 50.0116618075802 0 0 21.5889212827988 58.3637992831541 0 0 0 human, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 28 4 0 0 ENSG00000255433.1 ENST00000532274.1 chr11:56615954-56644687 4 2030 26697 intergenic -1.33 0 0,0,0 0 0,0,0 0 0 0 0 1.61407648799491 0 0 1.792935535828 0 0 0 chimp,guinea_pig,horse,human,macaque,orangutan, lincRNA lincRNA A549@0.434437,AG04450@0.001102,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0.000979,NHLF@0,SKNSHRA@0.270734, 0 0 0 0 ENSG00000255433.1 ENST00000526436.1 chr11:56616044-56645554 3 2688 26818 intergenic -1.33 0 0,0,0 0 0,0,0 0 0 0 0.978050595238095 1.60679394436572 0 0.994419642857143 1.78484599895593 0 0 0 chimp,horse,human,macaque,orangutan, lincRNA lincRNA A549@0.434437,AG04450@0.001102,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0.000979,NHLF@0,SKNSHRA@0.270734, 0 0 0 0 ENSG00000254662.1 ENST00000534162.1 chr11:57093077-57095432 2 309 2044 exonic 0 0 0,0,1 0 0,0,0 190.093851132686 115.161937377691 0 252.964401294498 128.09637964775 99.759 288.320388349515 127.60469667319 102.72 0 0 cat,chimp,cow,dog,elephant,guinea_pig,horse,human,macaque,marmoset,mouse,orangutan,panda,platypus,rabbit,rat, antisense antisense A549@0.0515085,AG04450@0.0447045,BJ@0.089252,GM12878@0,H1HESC@0.028667,HELAS3@0.0085335,HEPG2@0.0279835,HMEC@0.013166,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0.006274,SKNSHRA@0.036489, 0 0 0 0 ENSG00000255301.1 ENST00000528885.1 chr11:57243966-57245007 2 682 357 exonic 0 0 1,1,1 0 0,0,0 235.530791788856 0 0 276.231671554252 485.008403361345 0 239.203812316716 273.859943977591 3.159 0 0 chimp,cow,dog,elephant,horse,human,macaque,marmoset,mouse,orangutan,panda,rat, antisense antisense A549@0,AG04450@0.003277,BJ@0,GM12878@0.015529,H1HESC@0.0546755,HELAS3@0.03217,HEPG2@0.052593,HMEC@0,HSMM@0.0090245,HUVEC@0.007808,K562@0.0118835,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0.0157295, 0 0 0 0 ENSG00000254602.1 ENST00000528466.1 chr11:57405497-57418182 2 565 12118 intronic -0.37 0 0,0,0 0 0,0,0 0 143.864994223469 45.92 27.1185840707965 127.602739726027 42.676 24.6566371681416 118.869615448094 13.458 0 0 cat,chimp,cow,dog,elephant,horse,human,macaque,marmoset,mouse,pig,rabbit,rat, processed_transcript processed_transcript A549@0.465898,AG04450@0.682651,BJ@0.674052,GM12878@0.004937,H1HESC@2.5031,HELAS3@0.081595,HEPG2@0.085863,HMEC@1.15143,HSMM@0.21244,HUVEC@0.239258,K562@0.0098395,MCF7@0.001042,NHEK@0.361335,NHLF@0.319504,SKNSHRA@0.733567, 0 0 0 0 ENSG00000254602.1 ENST00000530595.1 chr11:57405849-57420263 2 2788 11624 intronic 3.11 0 0,1,0 1 0,0,0 29.1115494978479 136.040605643496 125.956 22.9078192252511 120.198898830007 145.838 22.2794117647059 110.464384033035 124.332 0 1 chimp,human,marmoset,orangutan, processed_transcript processed_transcript A549@0.465898,AG04450@0.682651,BJ@0.674052,GM12878@0.004937,H1HESC@2.5031,HELAS3@0.081595,HEPG2@0.085863,HMEC@1.15143,HSMM@0.21244,HUVEC@0.239258,K562@0.0098395,MCF7@0.001042,NHEK@0.361335,NHLF@0.319504,SKNSHRA@0.733567, 0 0 0 0 ENSG00000254602.1 ENST00000525988.1 chr11:57414359-57418205 2 568 3276 exonic 9.31 0 0,0,0 0 0,0,0 49.7746478873239 217.972527472528 199.746 56.8292253521127 174.25 224.913 64.1584507042253 152.396825396825 231.342 0 0 cat,chimp,cow,dog,elephant,horse,human,macaque,marmoset,mouse,panda,pig,rabbit,rat, processed_transcript processed_transcript A549@0.465898,AG04450@0.682651,BJ@0.674052,GM12878@0.004937,H1HESC@2.5031,HELAS3@0.081595,HEPG2@0.085863,HMEC@1.15143,HSMM@0.21244,HUVEC@0.239258,K562@0.0098395,MCF7@0.001042,NHEK@0.361335,NHLF@0.319504,SKNSHRA@0.733567, 0 0 0 0 ENSG00000254602.1 ENST00000529908.1 chr11:57415819-57418248 2 578 1849 exonic -0.37 0 0,1,1 0 0,0,0 0 298.408869659275 23.936 24.5190311418685 210.954570037858 18.285 17.856401384083 180.972417522985 21.445 0 0 cat,chimp,cow,dog,elephant,horse,human,macaque,marmoset,mouse,panda,pig,rabbit,rat, processed_transcript processed_transcript A549@0.465898,AG04450@0.682651,BJ@0.674052,GM12878@0.004937,H1HESC@2.5031,HELAS3@0.081595,HEPG2@0.085863,HMEC@1.15143,HSMM@0.21244,HUVEC@0.239258,K562@0.0098395,MCF7@0.001042,NHEK@0.361335,NHLF@0.319504,SKNSHRA@0.733567, 0 0 0 0 ENSG00000255146.1 ENST00000526131.1 chr11:57811582-57827610 4 1886 14136 intronic 1.94 1 0,0,0 0 0,0,0 0 0.439303904923599 0 3.29003181336161 2.97198641765705 0 19.9209968186638 4.55157045840407 0 0 1 chimp,human,macaque,orangutan, lincRNA lincRNA A549@0.0011485,AG04450@0.041367,BJ@0.002561,GM12878@0,H1HESC@0.002882,HELAS3@0,HEPG2@0.0023025,HMEC@0,HSMM@0.0454655,HUVEC@0.003149,K562@0,MCF7@0,NHEK@0.0490787,NHLF@0.013306,SKNSHRA@0, 0 0 0 0 ENSG00000255299.1 ENST00000531715.1 chr11:58265361-58270509 3 582 4562 intergenic 4.96 0 0,0,1 0 0,0,0 0 4.58790004384042 0 4.92783505154639 0.692897851819378 0 5.17525773195876 6.25558965366067 3.466 0 0 chimp,horse,human,macaque,marmoset,orangutan, lincRNA lincRNA A549@0.0047215,AG04450@0.017561,BJ@0.0115165,GM12878@0.963815,H1HESC@0.0680365,HELAS3@0,HEPG2@0.008226,HMEC@0,HSMM@0.0073225,HUVEC@0,K562@0,MCF7@0,NHEK@0.0817147,NHLF@0.019864,SKNSHRA@0.0038785, 0 0 0 0 ENSG00000255299.1 ENST00000528978.1 chr11:58265388-58273068 4 558 7116 intergenic 4.96 0 1,1,1 0 0,0,0 0 4.08516020236088 9.509 0 2.31365935919056 18.598 0 10.5584598088814 13.736 1 1 chimp,human,macaque,marmoset,orangutan, lincRNA lincRNA A549@0.0047215,AG04450@0.017561,BJ@0.0115165,GM12878@0.963815,H1HESC@0.0680365,HELAS3@0,HEPG2@0.008226,HMEC@0,HSMM@0.0073225,HUVEC@0,K562@0,MCF7@0,NHEK@0.0817147,NHLF@0.019864,SKNSHRA@0.0038785, 0 0 0 0 ENSG00000255299.1 ENST00000527054.1 chr11:58265457-58273231 3 526 7244 intergenic 4.96 0 0,0,0 0 0,0,0 0 4.01297625621204 9.509 0 2.27277747101049 18.598 0 10.3718939812258 13.736 0 0 chimp,cow,elephant,human,macaque,marmoset,orangutan, lincRNA lincRNA A549@0.0047215,AG04450@0.017561,BJ@0.0115165,GM12878@0.963815,H1HESC@0.0680365,HELAS3@0,HEPG2@0.008226,HMEC@0,HSMM@0.0073225,HUVEC@0,K562@0,MCF7@0,NHEK@0.0817147,NHLF@0.019864,SKNSHRA@0.0038785, 0 0 0 0 ENSG00000254717.1 ENST00000529451.1 chr11:58645775-58660445 3 507 14159 intergenic 13.97 0 0,0,0 0 0,0,0 0 0 0 0 0.50794547637545 0 0 1.21018433505191 0 0 0 chimp,elephant,human,macaque,marmoset,opossum,orangutan, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000255523.1 ENST00000531918.1 chr11:58684488-58696162 2 641 11031 intronic -6.28 0 0,0,0 0 0,0,0 0 0 0 0 0 0 0 0 0 0 1 chimp,human,macaque,orangutan, antisense antisense A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0.021953,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000255240.1 ENST00000533954.1 chr11:58701116-58826132 6 2804 122202 intronic 1.71 0 0,1,0 0 0,0,0 0 0.150177574835109 0 0 0.320608500679203 0 0 0.7155938528011 0 1 1 chimp,human,macaque,marmoset,orangutan, processed_transcript processed_transcript A549@0,AG04450@0.0007975,BJ@0,GM12878@0.100501,H1HESC@0.49126,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0.0046765,K562@0,MCF7@0.0068995,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000255240.1 ENST00000525714.1 chr11:58725690-58746758 3 891 20173 intergenic -1.59 0 0,0,0 0 0,0,0 0 0 0 0 0 0 0 0 2.187 0 0 chimp,horse,human,marmoset,orangutan, processed_transcript processed_transcript A549@0,AG04450@0.0007975,BJ@0,GM12878@0.100501,H1HESC@0.49126,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0.0046765,K562@0,MCF7@0.0068995,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000255240.1 ENST00000532098.1 chr11:58736426-58825923 5 566 88923 intergenic -1.70 0 0,1,0 0 0,0,0 0 0 0 0 0.440594671794699 0 0 0.880042283773602 0 0 0 chimp,horse,human,macaque,marmoset,orangutan, processed_transcript processed_transcript A549@0,AG04450@0.0007975,BJ@0,GM12878@0.100501,H1HESC@0.49126,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0.0046765,K562@0,MCF7@0.0068995,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000245571.2 ENST00000501817.2 chr11:58897606-58910228 5 2105 10509 exonic 7.11 0 0,1,1 1 0,0,0 0 0 0 0 0 0 0 0 0 0 0 chimp,horse,human,macaque,orangutan, lincRNA lincRNA A549@0.836157,AG04450@1.20061,BJ@1.81793,GM12878@1.6136,H1HESC@2.83717,HELAS3@1.63175,HEPG2@0.440992,HMEC@0.875122,HSMM@1.10843,HUVEC@0.955319,K562@0.054505,MCF7@1.27794,NHEK@1.13925,NHLF@1.18816,SKNSHRA@1.41579, 0 0 0 0 ENSG00000245571.2 ENST00000531708.1 chr11:58902763-58910488 4 876 6843 exonic 0.53 0 0,1,0 1 0,0,0 0 0 0 0 0 0 0 0 0 0 1 chimp,human,macaque,orangutan, lincRNA lincRNA A549@0.836157,AG04450@1.20061,BJ@1.81793,GM12878@1.6136,H1HESC@2.83717,HELAS3@1.63175,HEPG2@0.440992,HMEC@0.875122,HSMM@1.10843,HUVEC@0.955319,K562@0.054505,MCF7@1.27794,NHEK@1.13925,NHLF@1.18816,SKNSHRA@1.41579, 0 0 0 0 ENSG00000245571.2 ENST00000532845.1 chr11:58903398-58907588 2 514 3674 intergenic 0.53 0 0,0,0 0 0,0,0 0 0 0 0 0 0 0 0 0 0 0 chimp,horse,human,macaque, lincRNA lincRNA A549@0.836157,AG04450@1.20061,BJ@1.81793,GM12878@1.6136,H1HESC@2.83717,HELAS3@1.63175,HEPG2@0.440992,HMEC@0.875122,HSMM@1.10843,HUVEC@0.955319,K562@0.054505,MCF7@1.27794,NHEK@1.13925,NHLF@1.18816,SKNSHRA@1.41579, 0 0 0 0 ENSG00000245571.2 ENST00000533220.1 chr11:58907188-58910244 2 532 2522 exonic 0.84 0 0,1,0 1 0,0,0 0 0 0 0 0 0 0 0 0 1 1 chimp,human,macaque,marmoset,orangutan, lincRNA lincRNA A549@0.836157,AG04450@1.20061,BJ@1.81793,GM12878@1.6136,H1HESC@2.83717,HELAS3@1.63175,HEPG2@0.440992,HMEC@0.875122,HSMM@1.10843,HUVEC@0.955319,K562@0.054505,MCF7@1.27794,NHEK@1.13925,NHLF@1.18816,SKNSHRA@1.41579, 0 0 0 0 ENSG00000214797.3 ENST00000399003.1 chr11:59036349-59051506 2 2803 12352 intergenic 1.12 0 0,0,1 0 0,1,0 0 0 0 0 0 36.306 1.28933285765252 0.157545336787565 36.934 1 1 chimp,human,macaque,marmoset,orangutan, lincRNA processed_transcript A549@0,AG04450@0,BJ@0.0023075,GM12878@0.329531,H1HESC@0,HELAS3@0.0016665,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0.00933733,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000255008.1 ENST00000533552.1 chr11:59328572-59333547 6 810 4155 intergenic -10.96 0 0,1,0 0 0,0,0 0 0 12.88 0 3.06594464500602 20.335 0 3.23393501805054 20.09 1 1 chimp,human,macaque,marmoset,orangutan, lincRNA lincRNA A549@0.0272395,AG04450@0.0441825,BJ@0.0208455,GM12878@0.0649615,H1HESC@0.007284,HELAS3@0.103383,HEPG2@0.0069335,HMEC@0.016433,HSMM@0.0027935,HUVEC@0.016202,K562@0.106709,MCF7@0,NHEK@0.00887967,NHLF@0.0073685,SKNSHRA@0.057701, 0 0 0 0 ENSG00000255139.1 ENST00000531108.1 chr11:59383902-59407015 4 436 22671 exonic 4.37 0 0,1,1 0 0,0,0 49.644495412844 30.6050019849146 195.341 54.2935779816514 21.5215473512417 217.682 72.954128440367 20.8771117286401 182.404 0 0 chimp,dog,elephant,horse,human,macaque,marmoset,mouse,orangutan,rabbit, antisense antisense A549@0.031886,AG04450@0.0129135,BJ@0.008123,GM12878@0.129171,H1HESC@0.0195635,HELAS3@0.0664635,HEPG2@0.031885,HMEC@0.055013,HSMM@0.028383,HUVEC@0.0135275,K562@0.178206,MCF7@0.031985,NHEK@0.047662,NHLF@0.0366285,SKNSHRA@0.063855, 0 0 0 0 ENSG00000255139.1 ENST00000531311.1 chr11:59387887-59407334 2 599 18846 exonic -0.05 0 0,0,1 0 0,0,0 36.135225375626 34.757349039584 0 39.5191986644407 25.8895786904383 0 50.6677796327212 25.1143478722275 0 0 0 cat,chimp,dog,elephant,horse,human,macaque,marmoset,orangutan,rabbit, antisense antisense A549@0.031886,AG04450@0.0129135,BJ@0.008123,GM12878@0.129171,H1HESC@0.0195635,HELAS3@0.0664635,HEPG2@0.031885,HMEC@0.055013,HSMM@0.028383,HUVEC@0.0135275,K562@0.178206,MCF7@0.031985,NHEK@0.047662,NHLF@0.0366285,SKNSHRA@0.063855, 0 0 0 0 ENSG00000255355.1 ENST00000534120.1 chr11:59436785-59443268 2 628 5853 intergenic 9.18 0 0,0,0 1 0,0,0 177.057324840764 0 17.794 178.676751592357 0.483512728515291 165.59 186.773885350318 1.41944302067316 171.969 0 1 chimp,human,marmoset,orangutan, antisense antisense A549@0.023313,AG04450@0.003448,BJ@0.003908,GM12878@0.069549,H1HESC@0.008645,HELAS3@0.041572,HEPG2@0.0086595,HMEC@0,HSMM@0.0033375,HUVEC@0.0055475,K562@0.008012,MCF7@0.01864,NHEK@0.019435,NHLF@0,SKNSHRA@0.0036015, 0 0 0 0 ENSG00000255355.1 ENST00000531276.1 chr11:59442409-59443514 2 681 422 intergenic -4.96 0 0,0,0 0 0,0,0 163.277533039648 0 0 164.770925110132 0 0 172.237885462555 0 0 0 1 chimp,human,orangutan, antisense antisense A549@0.023313,AG04450@0.003448,BJ@0.003908,GM12878@0.069549,H1HESC@0.008645,HELAS3@0.041572,HEPG2@0.0086595,HMEC@0,HSMM@0.0033375,HUVEC@0.0055475,K562@0.008012,MCF7@0.01864,NHEK@0.019435,NHLF@0,SKNSHRA@0.0036015, 0 0 0 0 ENSG00000254477.1 ENST00000525337.1 chr11:59520488-59522448 2 877 1081 intronic 1.51 0 0,1,0 0 0,0,0 0 0 0 9.06157354618016 4.01017576318224 68.775 9.29418472063854 4.01017576318224 54.486 1 1 chimp,human,macaque,marmoset,orangutan, antisense antisense A549@0.0323935,AG04450@0.114747,BJ@0.033324,GM12878@0,H1HESC@0.422635,HELAS3@0.203327,HEPG2@0.129191,HMEC@0.051241,HSMM@0.050925,HUVEC@0.759843,K562@0.259238,MCF7@0.090065,NHEK@0.0609823,NHLF@0.130576,SKNSHRA@0.099166, 0 0 0 0 ENSG00000255453.1 ENST00000533323.1 chr11:59561584-59562189 2 562 41 intronic -1.35 0 0,1,0 0 0,0,0 44.270462633452 311 191.352 13.1814946619217 463 124.843 12.3843416370107 319.268292682927 124.608 0 0 chimp,elephant,horse,human,macaque,marmoset,panda,pig, antisense antisense A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0.00468167,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000255393.1 ENST00000534388.1 chr11:59792381-59798550 3 519 5646 intergenic -4.95 0 0,0,1 0 0,0,0 0 1.07350336521431 0 1.38150289017341 2.30021253985122 4.734 7.53757225433526 2.54994686503719 6.672 0 0 cat,chimp,cow,dog,guinea_pig,horse,human,macaque,marmoset,mouse,orangutan,panda,pig,rat, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0.008896,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000254952.1 ENST00000533106.1 chr11:59927160-59928295 3 382 749 intergenic 1.93 1 0,1,0 0 0,0,0 0 0 0 0 0 0 0 0 0 0 1 chimp,human,orangutan, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0.0752755,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0.060292,K562@0.042565,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000181995.7 ENST00000412599.1 chr11:60383209-60454622 6 766 70637 intergenic -5.19 1 0,1,0 0 0,0,0 0 0.885173492645497 0 8.54699738903394 1.30316972691366 0 12.845953002611 3.02173082095785 0 0 0 chimp,cow,dog,horse,human,macaque,orangutan,pig, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000181995.7 ENST00000320202.4 chr11:60383224-60454622 7 845 70541 intergenic -5.78 1 0,1,0 0 0,0,0 4.35502958579882 0.830949376958081 0 11.4934911242604 1.25544009866602 0 15.4733727810651 2.97531931784352 0 0 0 chimp,dog,human,macaque,marmoset,orangutan,rabbit, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000181995.7 ENST00000527161.1 chr11:60414754-60454622 4 745 39117 intergenic 3.27 1 0,0,0 0 0,0,0 0 1.59843546284224 0 7.67651006711409 2.01628447989365 0 12.0644295302013 4.54809929186799 0 1 1 chimp,human,macaque,marmoset,orangutan, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000181995.7 ENST00000532591.1 chr11:60421191-60454622 4 466 32959 intergenic -3.90 1 0,0,0 0 0,0,0 7.89699570815451 0.837889499074608 0 19.0643776824034 2.27886161594709 0 26.2296137339056 4.54261355016839 0 0 0 chimp,cow,dog,guinea_pig,horse,human,macaque,marmoset,mouse,orangutan,rabbit, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000255845.1 ENST00000541495.1 chr11:60581405-60589212 3 352 7451 intergenic -3.51 1 0,0,1 0 0,0,0 0 0 0 0 0 0 0 0 0 0 0 chimp,horse,human,macaque,orangutan,pig, antisense antisense A549@0,AG04450@0,BJ@0,GM12878@0.865592,H1HESC@0.0167425,HELAS3@0,HEPG2@0.0122575,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000255959.1 ENST00000539897.1 chr11:60603469-60610438 2 499 6468 exonic 5.70 0 0,1,0 0 0,0,0 0 2.27581941867656 0 85.2004008016032 7.23438466295609 0 86.627254509018 8.03679653679654 0 0 0 chimp,cow,elephant,guinea_pig,horse,human,macaque,marmoset,mouse,opossum,orangutan,panda,rat, antisense antisense A549@0,AG04450@0,BJ@0.0127315,GM12878@0,H1HESC@0.005144,HELAS3@0.029007,HEPG2@0.0669695,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0.012344,SKNSHRA@0, 0 0 0 0 ENSG00000257052.1 ENST00000544421.1 chr11:60674261-60677214 2 808 2143 intergenic -0.54 0 0,1,1 1 0,0,0 0 0 49.69 0 0 64.426 0 3.62855809612693 62.532 0 1 chimp,human,macaque, antisense antisense A549@0.103508,AG04450@0.054061,BJ@0.093006,GM12878@0.159963,H1HESC@0.044237,HELAS3@0.265695,HEPG2@0.169623,HMEC@0.030331,HSMM@0.073793,HUVEC@0.0202925,K562@0.134784,MCF7@0.100521,NHEK@0.0314727,NHLF@0.140077,SKNSHRA@0.273531, 0 0 0 0 ENSG00000256944.1 ENST00000543275.1 chr11:60680638-60681524 2 403 481 exonic 1.54 1 0,0,1 0 0,0,0 0 0 61.776 21.0223325062035 17.5634095634096 89.571 20.9627791563275 27.6216216216216 101.479 0 1 chimp,human,marmoset,orangutan, antisense antisense A549@0.026798,AG04450@0.0262495,BJ@0.012158,GM12878@0.0137775,H1HESC@0.0327895,HELAS3@0.285001,HEPG2@0.110409,HMEC@0.02022,HSMM@0.0157895,HUVEC@0,K562@0.107045,MCF7@0.0050765,NHEK@0.0288617,NHLF@0.0048175,SKNSHRA@0.0498725, 0 0 0 0 ENSG00000256196.1 ENST00000543907.1 chr11:60685941-60692869 2 862 6064 intronic 2.16 0 0,1,0 0 0,0,0 0 55.3895118733509 6.44 0 62.8062335092348 26.878 0 57.0130277044855 28.207 1 1 chimp,human,macaque,marmoset,orangutan, antisense antisense A549@0.003197,AG04450@0.0051885,BJ@0.0187275,GM12878@0.010852,H1HESC@0.0546675,HELAS3@0.24525,HEPG2@0.0982195,HMEC@0.018957,HSMM@0.0184685,HUVEC@0,K562@0.008373,MCF7@0.188919,NHEK@0.0167303,NHLF@0.0044665,SKNSHRA@0.089711, 0 0 0 0 ENSG00000256733.1 ENST00000536495.1 chr11:60823209-60835007 4 448 11344 intergenic -0.11 0 0,0,0 0 0,0,0 79.78125 12.8951868829337 0 34.9151785714286 16.4895098730606 0 37.5647321428571 15.2078631875882 0 0 0 chimp,horse,human,macaque,marmoset,orangutan,panda, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0.0617245,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000255931.1 ENST00000534856.1 chr11:61263912-61267548 2 552 3082 intergenic 5.22 0 0,0,0 0 0,0,0 12.1159420289855 0 16.646 8.31521739130435 0 16.169 15.9963768115942 7.53049967553537 27.296 0 0 chimp,dog,horse,human,macaque,marmoset,orangutan, antisense lincRNA A549@0.0156725,AG04450@0,BJ@0,GM12878@0.0115085,H1HESC@0.008933,HELAS3@0.019288,HEPG2@0.035577,HMEC@0,HSMM@0.0041145,HUVEC@0,K562@0.0439215,MCF7@0.0074225,NHEK@0,NHLF@0,SKNSHRA@0.120724, 0 0 0 0 ENSG00000250230.2 ENST00000506329.2 chr11:61355966-61375022 4 2345 16705 intergenic 5.51 0 0,1,0 0 0,0,0 5.87633262260128 12.0483687518707 16.24 5.82899786780384 14.5085303801257 26.851 5.86055437100213 15.5303801257109 27.527 0 0 chimp,dog,human,macaque,marmoset,pig, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0.128732,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0.001752,HUVEC@0,K562@0,MCF7@0.0881705,NHEK@0.001124,NHLF@0.0016615,SKNSHRA@0.017653, 0 0 0 0 ENSG00000255947.1 ENST00000542121.1 chr11:61422137-61423174 2 460 575 intergenic -1.39 0 0,0,0 0 0,0,0 0 0 0 0 0 0 0 0 0 0 0 chimp,dog,horse,human,macaque,marmoset,orangutan,panda,rabbit, lincRNA lincRNA A549@0.0239145,AG04450@0,BJ@0,GM12878@0,H1HESC@0.0064325,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000124915.6 ENST00000536405.1 chr11:61513965-61525121 6 2460 8686 exonic 1.56 0 0,1,0 0 0,1,0 34.4479674796748 35.1483997236933 0 73.430487804878 44.5697674418605 0 68.3219512195122 42.6345843886714 0 0 0 chimp,human,macaque,marmoset,orangutan,panda, lincRNA lincRNA A549@0.115755,AG04450@0,BJ@0.003491,GM12878@0.573365,H1HESC@0.008008,HELAS3@0.100313,HEPG2@0.145355,HMEC@0,HSMM@0,HUVEC@0,K562@0.012805,MCF7@0.013693,NHEK@0,NHLF@0,SKNSHRA@0.015865, 0 0 0 0 ENSG00000124915.6 ENST00000541891.1 chr11:61514397-61516165 3 460 1304 exonic 0.09 0 0,0,1 0 0,0,0 53.7782608695652 0 0 99.2934782608696 4.79754601226994 4.466 86.6434782608696 4.73236196319018 4.55 0 0 chimp,cow,dog,elephant,horse,human,macaque,marmoset,orangutan, lincRNA lincRNA A549@0.115755,AG04450@0,BJ@0.003491,GM12878@0.573365,H1HESC@0.008008,HELAS3@0.100313,HEPG2@0.145355,HMEC@0,HSMM@0,HUVEC@0,K562@0.012805,MCF7@0.013693,NHEK@0,NHLF@0,SKNSHRA@0.015865, 0 0 0 0 ENSG00000124915.6 ENST00000244906.6 chr11:61521501-61525127 4 923 2697 intronic 1.56 0 0,1,0 0 0,1,0 0 56.9358546533185 0 0 66.613644790508 0 0 69.3563218390805 0 0 0 cat,chimp,cow,horse,human,macaque,marmoset,orangutan,panda,pig, lincRNA lincRNA A549@0.115755,AG04450@0,BJ@0.003491,GM12878@0.573365,H1HESC@0.008008,HELAS3@0.100313,HEPG2@0.145355,HMEC@0,HSMM@0,HUVEC@0,K562@0.012805,MCF7@0.013693,NHEK@0,NHLF@0,SKNSHRA@0.015865, 0 0 0 0 ENSG00000255553.1 ENST00000524942.1 chr11:61844749-61849656 2 786 4119 intergenic -1.10 0 0,1,1 0 0,0,0 0 0 0 0 0 7.14 0 0 7.42 1 1 chimp,human,macaque,marmoset,orangutan, lincRNA lincRNA A549@0.014021,AG04450@0.008533,BJ@0.0082135,GM12878@0.0051165,H1HESC@0,HELAS3@0.038065,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0.00335067,NHLF@0.002476,SKNSHRA@0.0057585, 0 0 0 0 ENSG00000254404.1 ENST00000529875.1 chr11:61980899-62028021 3 350 46768 intronic -1.75 0 0,0,0 0 0,0,0 0 0 0 0 0.356205097502566 0 0 0.425803968525488 0 0 0 chimp,horse,human,macaque,marmoset,orangutan, antisense antisense A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000255118.1 ENST00000400902.4 chr11:62104383-62105562 2 483 694 exonic 8.12 0 0,1,1 0 0,0,0 0 0 17.16 28.3561076604555 12.1959654178674 18.175 43.2691511387164 12.1296829971182 22.201 0 1 chimp,human,macaque,orangutan, antisense antisense A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0.081834,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0.0122195,K562@0.010128,MCF7@0.0165815,NHEK@0,NHLF@0,SKNSHRA@0.004678, 2 44 0 0 ENSG00000255126.1 ENST00000526045.1 chr11:62158988-62160844 2 588 1266 exonic -4.31 0 0,1,0 0 0,0,0 51.3044217687075 45.044233807267 0 54.8401360544218 39.1563981042654 18.362 77.8469387755102 55.1682464454976 18.775 0 0 chimp,cow,dog,elephant,human,macaque,marmoset,orangutan, antisense antisense A549@0,AG04450@0,BJ@0,GM12878@0.01025,H1HESC@0,HELAS3@0.0079225,HEPG2@0.0072225,HMEC@0,HSMM@0,HUVEC@0,K562@0.0046195,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0.0115565, 0 0 0 0 ENSG00000255446.1 ENST00000528983.1 chr11:62189317-62194196 2 508 4369 exonic -4.87 0 0,0,0 0 0,0,0 0 0 0 1.50590551181102 2.90981918059052 12.11 6.28149606299213 3.50011444266423 12.425 0 0 cat,chimp,cow,elephant,horse,human,macaque,marmoset,orangutan,pig, antisense antisense A549@0.0345065,AG04450@0.046085,BJ@0.022263,GM12878@0.048338,H1HESC@0,HELAS3@0.0947645,HEPG2@0.039212,HMEC@0,HSMM@0,HUVEC@0,K562@0.043342,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0.12039, 0 0 0 0 ENSG00000250659.2 ENST00000544108.1 chr11:62304784-62309490 2 262 4442 intronic -4.18 0 0,1,0 0 0,0,0 0 3.62899594777127 0 0 13.1942818550203 28.903 0 13.5520036019811 26.09 0 1 chimp,human,orangutan, antisense antisense A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 1 96 0 0 ENSG00000257058.1 ENST00000538101.1 chr11:62313471-62315171 2 389 1309 intronic 0 0 0,1,1 0 0,0,0 107.928020565553 56.1695951107716 79.165 99.6195372750643 145.689075630252 153.519 69.4601542416452 135.409472880061 125.87 0 0 cat,chimp,cow,dog,elephant,horse,human,macaque,marmoset,orangutan,panda,pig,rabbit, antisense antisense A549@0.022116,AG04450@0.029534,BJ@0.0578625,GM12878@0.0051555,H1HESC@0.029597,HELAS3@0.0514015,HEPG2@0.225594,HMEC@0.010472,HSMM@0.0915225,HUVEC@0.179654,K562@0.017815,MCF7@0.020801,NHEK@0.0218037,NHLF@0.01486,SKNSHRA@0.0477405, 0 0 0 0 ENSG00000254742.1 ENST00000525500.1 chr11:62357121-62357959 2 692 144 intronic -4.44 0 0,0,0 0 0,0,0 0 0 41.86 0 0 53.295 0 0 54.815 0 0 chimp,horse,human,macaque,marmoset,orangutan,panda,pig, antisense antisense A549@0.223317,AG04450@0.020761,BJ@0.049922,GM12878@0.263294,H1HESC@0.200304,HELAS3@0.76522,HEPG2@0.360405,HMEC@0.008357,HSMM@0.0233425,HUVEC@0.149344,K562@0.539246,MCF7@0.29772,NHEK@0.0764223,NHLF@0.307734,SKNSHRA@0.123291, 0 0 0 0 ENSG00000254964.1 ENST00000532626.1 chr11:62373633-62373877 2 90 152 exonic 0 0 0,0,0 0 0,0,0 269.888888888889 0 134.112 339.1 0 197.601 373.066666666667 0 189.075 0 0 cat,chimp,cow,dog,elephant,guinea_pig,horse,human,macaque,marmoset,mouse,orangutan,panda,rabbit,rat, antisense antisense A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000256690.1 ENST00000535817.1 chr11:62599706-62601515 2 563 1244 exonic 3.33 0 1,1,1 0 0,0,0 82.0603907637655 59.9236334405145 97.341 199.165186500888 74.0112540192926 143.173 215.726465364121 75.5361736334405 128.309 0 0 cat,chimp,cow,dog,elephant,horse,human,macaque,marmoset,mouse,opossum,orangutan,panda,rabbit,rat, antisense antisense A549@0.0126425,AG04450@0.085441,BJ@0.104862,GM12878@0.0518,H1HESC@0.178741,HELAS3@0.579425,HEPG2@0.498758,HMEC@0.007247,HSMM@0.0274565,HUVEC@0.15149,K562@0.134729,MCF7@0.204169,NHEK@0.006896,NHLF@0.0137485,SKNSHRA@0.254435, 0 0 0 0 ENSG00000256690.1 ENST00000535867.1 chr11:62600407-62601391 2 555 427 exonic 3.33 0 1,1,1 0 0,0,0 91.009009009009 0 88.211 339.291891891892 0 114.734 371.951351351351 2.57142857142857 112.529 0 0 chimp,cow,dog,elephant,guinea_pig,horse,human,macaque,marmoset,mouse,opossum,orangutan,rabbit,rat, antisense antisense A549@0.0126425,AG04450@0.085441,BJ@0.104862,GM12878@0.0518,H1HESC@0.178741,HELAS3@0.579425,HEPG2@0.498758,HMEC@0.007247,HSMM@0.0274565,HUVEC@0.15149,K562@0.134729,MCF7@0.204169,NHEK@0.006896,NHLF@0.0137485,SKNSHRA@0.254435, 0 0 0 0 ENSG00000255717.1 ENST00000539921.1 chr11:62619460-62622708 9 1062 2170 intergenic -0.10 1 1,1,1 0 0,0,0 0 61.8709677419355 7.82 1.06026365348399 83.3995391705069 56.873 25.0084745762712 90.331797235023 57.274 0 1 chimp,human,macaque,orangutan, lincRNA ncrna_host A549@121.103,AG04450@37.9205,BJ@28.4804,GM12878@128.43,H1HESC@213.561,HELAS3@511.709,HEPG2@110.948,HMEC@37.5142,HSMM@17.2969,HUVEC@47.8529,K562@350.051,MCF7@87.1345,NHEK@56.334,NHLF@22.2315,SKNSHRA@27.5674, 0 0 0 0 ENSG00000255717.1 ENST00000540725.1 chr11:62619460-62623218 10 1364 2376 intergenic 2.61 1 1,1,1 1 0,0,0 5.73313782991202 56.506734006734 0 13.158357771261 85.118265993266 26.962 32.2719941348974 91.7592592592593 23.808 0 1 chimp,human,macaque,orangutan, lincRNA ncrna_host A549@121.103,AG04450@37.9205,BJ@28.4804,GM12878@128.43,H1HESC@213.561,HELAS3@511.709,HEPG2@110.948,HMEC@37.5142,HSMM@17.2969,HUVEC@47.8529,K562@350.051,MCF7@87.1345,NHEK@56.334,NHLF@22.2315,SKNSHRA@27.5674, 0 0 0 0 ENSG00000255717.1 ENST00000537925.1 chr11:62619460-62623339 10 1477 2384 intergenic 2.61 1 1,1,1 1 0,0,0 5.29451591062965 56.3171140939597 0 12.1516587677725 84.8326342281879 26.962 29.8029790115098 91.4513422818792 23.808 0 1 chimp,human,macaque,orangutan, lincRNA ncrna_host A549@121.103,AG04450@37.9205,BJ@28.4804,GM12878@128.43,H1HESC@213.561,HELAS3@511.709,HEPG2@110.948,HMEC@37.5142,HSMM@17.2969,HUVEC@47.8529,K562@350.051,MCF7@87.1345,NHEK@56.334,NHLF@22.2315,SKNSHRA@27.5674, 0 0 0 0 ENSG00000255717.1 ENST00000537068.1 chr11:62619460-62623353 9 620 3257 intergenic 1.02 1 1,1,1 1 0,0,0 0 43.6229659195579 0 1.28387096774194 67.369665336199 26.962 3.1 79.9453484801965 23.808 0 0 chimp,horse,human,macaque,marmoset,orangutan, lincRNA ncrna_host A549@121.103,AG04450@37.9205,BJ@28.4804,GM12878@128.43,H1HESC@213.561,HELAS3@511.709,HEPG2@110.948,HMEC@37.5142,HSMM@17.2969,HUVEC@47.8529,K562@350.051,MCF7@87.1345,NHEK@56.334,NHLF@22.2315,SKNSHRA@27.5674, 0 0 0 0 ENSG00000255717.1 ENST00000538654.1 chr11:62619461-62623357 5 2763 1125 intergenic 2.61 1 1,1,1 1 0,0,0 37.2515381831343 34.8035555555556 0 60.9077090119435 46.368 26.962 71.4683315237061 58.7902222222222 23.103 1 1 chimp,human,macaque,marmoset,orangutan, lincRNA ncrna_host A549@121.103,AG04450@37.9205,BJ@28.4804,GM12878@128.43,H1HESC@213.561,HELAS3@511.709,HEPG2@110.948,HMEC@37.5142,HSMM@17.2969,HUVEC@47.8529,K562@350.051,MCF7@87.1345,NHEK@56.334,NHLF@22.2315,SKNSHRA@27.5674, 0 0 0 0 ENSG00000255717.1 ENST00000537869.1 chr11:62619463-62622932 9 1029 2424 intergenic -0.10 1 1,1,1 1 0,0,0 0 55.3877887788779 7.82 0.838678328474247 83.6497524752475 43.784 25.4946550048591 90.2103960396039 41.268 0 1 chimp,human,macaque,orangutan, lincRNA ncrna_host A549@121.103,AG04450@37.9205,BJ@28.4804,GM12878@128.43,H1HESC@213.561,HELAS3@511.709,HEPG2@110.948,HMEC@37.5142,HSMM@17.2969,HUVEC@47.8529,K562@350.051,MCF7@87.1345,NHEK@56.334,NHLF@22.2315,SKNSHRA@27.5674, 0 0 0 0 ENSG00000255717.1 ENST00000539975.1 chr11:62619492-62622708 7 948 2256 intergenic -0.10 1 1,1,1 0 0,0,0 0 59.5124113475177 7.82 0.554852320675105 80.6192375886525 56.873 26.9293248945148 87.5731382978723 57.274 0 1 chimp,human,macaque,orangutan, lincRNA ncrna_host A549@121.103,AG04450@37.9205,BJ@28.4804,GM12878@128.43,H1HESC@213.561,HELAS3@511.709,HEPG2@110.948,HMEC@37.5142,HSMM@17.2969,HUVEC@47.8529,K562@350.051,MCF7@87.1345,NHEK@56.334,NHLF@22.2315,SKNSHRA@27.5674, 0 0 0 0 ENSG00000255717.1 ENST00000535076.1 chr11:62619520-62621168 4 845 797 intergenic -0.10 1 1,1,1 0 0,0,0 5.30177514792899 85.67252195734 50.782 13.1065088757396 114.984943538269 60.23 42.5029585798817 112.181932245922 77.25 0 1 chimp,human,macaque,orangutan, lincRNA ncrna_host A549@121.103,AG04450@37.9205,BJ@28.4804,GM12878@128.43,H1HESC@213.561,HELAS3@511.709,HEPG2@110.948,HMEC@37.5142,HSMM@17.2969,HUVEC@47.8529,K562@350.051,MCF7@87.1345,NHEK@56.334,NHLF@22.2315,SKNSHRA@27.5674, 0 0 0 0 ENSG00000255717.1 ENST00000545440.1 chr11:62619724-62622960 8 746 2476 intergenic 1.88 0 0,1,1 1 0,0,0 0 54.2245557350565 7.82 1.80026809651475 82.2564620355412 42.704 35.8954423592493 88.6453957996769 40.18 1 1 chimp,human,macaque,marmoset,orangutan, lincRNA ncrna_host A549@121.103,AG04450@37.9205,BJ@28.4804,GM12878@128.43,H1HESC@213.561,HELAS3@511.709,HEPG2@110.948,HMEC@37.5142,HSMM@17.2969,HUVEC@47.8529,K562@350.051,MCF7@87.1345,NHEK@56.334,NHLF@22.2315,SKNSHRA@27.5674, 0 0 0 0 ENSG00000255717.1 ENST00000542112.1 chr11:62619730-62623386 9 771 2869 intergenic 1.02 0 1,1,1 1 0,0,0 0 49.5224817009411 0 2.93125810635538 76.6688741721855 313.939 36.686121919585 82.3617985360753 334.225 1 1 chimp,human,macaque,marmoset,orangutan, lincRNA ncrna_host A549@121.103,AG04450@37.9205,BJ@28.4804,GM12878@128.43,H1HESC@213.561,HELAS3@511.709,HEPG2@110.948,HMEC@37.5142,HSMM@17.2969,HUVEC@47.8529,K562@350.051,MCF7@87.1345,NHEK@56.334,NHLF@22.2315,SKNSHRA@27.5674, 0 0 0 0 ENSG00000255717.1 ENST00000541615.1 chr11:62619762-62622960 9 739 2443 intergenic 1.02 0 0,1,1 1 0,0,0 0 54.9570200573066 7.82 2.17320703653586 83.1522717969709 42.704 36.6752368064953 89.5767498976668 40.18 1 1 chimp,human,macaque,marmoset,orangutan, lincRNA ncrna_host A549@121.103,AG04450@37.9205,BJ@28.4804,GM12878@128.43,H1HESC@213.561,HELAS3@511.709,HEPG2@110.948,HMEC@37.5142,HSMM@17.2969,HUVEC@47.8529,K562@350.051,MCF7@87.1345,NHEK@56.334,NHLF@22.2315,SKNSHRA@27.5674, 0 0 0 0 ENSG00000255717.1 ENST00000541578.1 chr11:62619769-62622960 11 577 2594 intergenic -3.01 0 0,1,1 1 0,0,0 0 51.7579028527371 7.82 3.82322357019064 77.9649190439476 42.704 16.7279029462738 90.8712413261372 40.18 0 0 chimp,human,macaque,marmoset,orangutan,rabbit, lincRNA ncrna_host A549@121.103,AG04450@37.9205,BJ@28.4804,GM12878@128.43,H1HESC@213.561,HELAS3@511.709,HEPG2@110.948,HMEC@37.5142,HSMM@17.2969,HUVEC@47.8529,K562@350.051,MCF7@87.1345,NHEK@56.334,NHLF@22.2315,SKNSHRA@27.5674, 0 0 0 0 ENSG00000255717.1 ENST00000538266.1 chr11:62620081-62622939 7 340 2506 intergenic 1.88 0 0,1,1 1 0,0,0 0 53.5754189944134 7.82 2.36176470588235 81.2717478052674 42.974 5.49705882352941 88.1129289704708 40.452 0 0 chimp,horse,human,macaque,marmoset,orangutan,pig, lincRNA ncrna_host A549@121.103,AG04450@37.9205,BJ@28.4804,GM12878@128.43,H1HESC@213.561,HELAS3@511.709,HEPG2@110.948,HMEC@37.5142,HSMM@17.2969,HUVEC@47.8529,K562@350.051,MCF7@87.1345,NHEK@56.334,NHLF@22.2315,SKNSHRA@27.5674, 0 0 0 0 ENSG00000255717.1 ENST00000545688.1 chr11:62620221-62622932 9 601 2094 intergenic -6.19 0 0,1,0 1 0,0,0 45.2978369384359 50.9589302769819 7.82 65.8136439267887 77.9665711556829 43.784 72.7603993344426 84.6394460362942 41.268 0 0 cat,chimp,cow,dog,elephant,human,macaque,marmoset,orangutan,rabbit, lincRNA ncrna_host A549@121.103,AG04450@37.9205,BJ@28.4804,GM12878@128.43,H1HESC@213.561,HELAS3@511.709,HEPG2@110.948,HMEC@37.5142,HSMM@17.2969,HUVEC@47.8529,K562@350.051,MCF7@87.1345,NHEK@56.334,NHLF@22.2315,SKNSHRA@27.5674, 0 0 0 0 ENSG00000255717.1 ENST00000544550.1 chr11:62620304-62622960 8 628 2014 intergenic -3.23 0 0,1,0 1 0,0,0 67.8980891719745 45.4915590863952 7.82 86.6353503184713 74.4985104270109 42.704 96.6273885350318 80.409632571996 40.18 0 0 chimp,cow,dog,elephant,horse,human,macaque,marmoset,orangutan,panda,pig,rabbit, lincRNA ncrna_host A549@121.103,AG04450@37.9205,BJ@28.4804,GM12878@128.43,H1HESC@213.561,HELAS3@511.709,HEPG2@110.948,HMEC@37.5142,HSMM@17.2969,HUVEC@47.8529,K562@350.051,MCF7@87.1345,NHEK@56.334,NHLF@22.2315,SKNSHRA@27.5674, 0 0 0 0 ENSG00000255717.1 ENST00000545920.1 chr11:62620544-62621814 3 622 644 intergenic -4.34 0 0,0,0 0 0,0,0 26.8569131832797 60.25 36.114 34.1463022508039 103.468944099379 56.123 56.1800643086817 96.2717391304348 60.715 0 0 chimp,cow,dog,guinea_pig,horse,human,macaque,marmoset,orangutan,panda,rabbit, lincRNA ncrna_host A549@121.103,AG04450@37.9205,BJ@28.4804,GM12878@128.43,H1HESC@213.561,HELAS3@511.709,HEPG2@110.948,HMEC@37.5142,HSMM@17.2969,HUVEC@47.8529,K562@350.051,MCF7@87.1345,NHEK@56.334,NHLF@22.2315,SKNSHRA@27.5674, 0 0 0 0 ENSG00000255717.1 ENST00000540865.1 chr11:62620545-62622960 6 778 1627 intergenic -5.63 0 0,1,0 1 0,0,0 32.9575835475578 40.5525507068224 7.82 53.194087403599 68.299938537185 42.704 46.646529562982 79.4474492931776 40.18 0 0 chimp,horse,human,macaque,marmoset,orangutan,panda, lincRNA ncrna_host A549@121.103,AG04450@37.9205,BJ@28.4804,GM12878@128.43,H1HESC@213.561,HELAS3@511.709,HEPG2@110.948,HMEC@37.5142,HSMM@17.2969,HUVEC@47.8529,K562@350.051,MCF7@87.1345,NHEK@56.334,NHLF@22.2315,SKNSHRA@27.5674, 0 0 0 0 ENSG00000255717.1 ENST00000535689.1 chr11:62620826-62622960 7 543 1579 intergenic -6.19 0 0,1,1 1 0,0,0 26.9834254143646 41.7853071564281 7.82 44.3075506445672 70.043065231159 42.704 36.7421731123389 81.4509183027233 40.18 0 0 chimp,cow,dog,elephant,horse,human,macaque,marmoset,orangutan,panda, lincRNA ncrna_host A549@121.103,AG04450@37.9205,BJ@28.4804,GM12878@128.43,H1HESC@213.561,HELAS3@511.709,HEPG2@110.948,HMEC@37.5142,HSMM@17.2969,HUVEC@47.8529,K562@350.051,MCF7@87.1345,NHEK@56.334,NHLF@22.2315,SKNSHRA@27.5674, 0 0 0 0 ENSG00000255717.1 ENST00000537024.1 chr11:62621019-62622951 6 526 1396 intergenic -6.19 0 0,1,1 1 0,0,0 31.7585551330798 35.2965616045845 7.82 43.5722433460076 64.5759312320917 42.704 49.4714828897338 76.2664756446991 40.18 0 0 chimp,cow,elephant,guinea_pig,horse,human,macaque,marmoset,orangutan,panda,rabbit, lincRNA ncrna_host A549@121.103,AG04450@37.9205,BJ@28.4804,GM12878@128.43,H1HESC@213.561,HELAS3@511.709,HEPG2@110.948,HMEC@37.5142,HSMM@17.2969,HUVEC@47.8529,K562@350.051,MCF7@87.1345,NHEK@56.334,NHLF@22.2315,SKNSHRA@27.5674, 0 0 0 0 ENSG00000255717.1 ENST00000539303.1 chr11:62621045-62622646 6 234 1357 intergenic -10.03 0 0,1,1 0 0,0,0 0 48.6212232866618 7.82 4.81196581196581 65.8319823139278 56.873 11.7008547008547 78.3633014001474 57.274 0 0 chimp,guinea_pig,human,macaque,marmoset,orangutan,pig, lincRNA ncrna_host A549@121.103,AG04450@37.9205,BJ@28.4804,GM12878@128.43,H1HESC@213.561,HELAS3@511.709,HEPG2@110.948,HMEC@37.5142,HSMM@17.2969,HUVEC@47.8529,K562@350.051,MCF7@87.1345,NHEK@56.334,NHLF@22.2315,SKNSHRA@27.5674, 0 0 0 0 ENSG00000255717.1 ENST00000541416.1 chr11:62621552-62623284 4 992 734 intergenic 2.61 0 0,1,1 1 0,0,0 7.88306451612903 49.2016348773842 0 17.5625 85.7711171662125 26.962 29.7681451612903 90.9577656675749 23.808 0 0 chimp,human,macaque,marmoset,panda, lincRNA ncrna_host A549@121.103,AG04450@37.9205,BJ@28.4804,GM12878@128.43,H1HESC@213.561,HELAS3@511.709,HEPG2@110.948,HMEC@37.5142,HSMM@17.2969,HUVEC@47.8529,K562@350.051,MCF7@87.1345,NHEK@56.334,NHLF@22.2315,SKNSHRA@27.5674, 0 0 0 0 ENSG00000255717.1 ENST00000537965.1 chr11:62621840-62622960 3 575 541 intergenic -4.70 0 0,1,0 1 0,0,0 17.6 48.0480591497227 7.82 32 85.463955637708 42.704 35.56 89.5268022181146 40.18 0 0 cat,chimp,horse,human,macaque,marmoset,orangutan,panda,rabbit, lincRNA ncrna_host A549@121.103,AG04450@37.9205,BJ@28.4804,GM12878@128.43,H1HESC@213.561,HELAS3@511.709,HEPG2@110.948,HMEC@37.5142,HSMM@17.2969,HUVEC@47.8529,K562@350.051,MCF7@87.1345,NHEK@56.334,NHLF@22.2315,SKNSHRA@27.5674, 0 0 0 0 ENSG00000255717.1 ENST00000545308.1 chr11:62621914-62622960 3 643 399 intergenic -5.40 0 0,1,0 1 0,0,0 40.4261275272162 25.3634085213033 7.82 41.9160186625194 95.1979949874687 42.704 45.2052877138414 101.075187969925 40.18 0 0 cat,chimp,cow,elephant,guinea_pig,horse,human,macaque,marmoset,orangutan,panda, lincRNA ncrna_host A549@121.103,AG04450@37.9205,BJ@28.4804,GM12878@128.43,H1HESC@213.561,HELAS3@511.709,HEPG2@110.948,HMEC@37.5142,HSMM@17.2969,HUVEC@47.8529,K562@350.051,MCF7@87.1345,NHEK@56.334,NHLF@22.2315,SKNSHRA@27.5674, 0 0 0 0 ENSG00000255717.1 ENST00000540904.1 chr11:62622152-62622960 2 592 214 intergenic -4.70 0 0,1,1 1 0,0,0 26.7331081081081 0 7.82 45.3783783783784 99.3644859813084 42.704 48.3057432432432 102.803738317757 40.18 0 0 cat,chimp,cow,elephant,guinea_pig,horse,human,macaque,marmoset,orangutan,panda,rabbit, lincRNA ncrna_host A549@121.103,AG04450@37.9205,BJ@28.4804,GM12878@128.43,H1HESC@213.561,HELAS3@511.709,HEPG2@110.948,HMEC@37.5142,HSMM@17.2969,HUVEC@47.8529,K562@350.051,MCF7@87.1345,NHEK@56.334,NHLF@22.2315,SKNSHRA@27.5674, 0 0 0 0 ENSG00000255717.1 ENST00000544983.1 chr11:62622154-62623230 2 868 206 intergenic 2.61 0 0,1,1 1 0,0,0 26.5115207373272 0 0 48.6336405529954 103.223300970874 26.962 51.3329493087558 106.796116504854 23.808 0 0 cat,chimp,elephant,guinea_pig,human,macaque,marmoset,mouse,orangutan,panda,rabbit, lincRNA ncrna_host A549@121.103,AG04450@37.9205,BJ@28.4804,GM12878@128.43,H1HESC@213.561,HELAS3@511.709,HEPG2@110.948,HMEC@37.5142,HSMM@17.2969,HUVEC@47.8529,K562@350.051,MCF7@87.1345,NHEK@56.334,NHLF@22.2315,SKNSHRA@27.5674, 0 0 0 0 ENSG00000257002.1 ENST00000543624.1 chr11:62677018-62685833 3 746 8065 exonic 2.80 0 0,0,1 1 0,0,0 313.084450402145 121.500805951643 281.794 219.234584450402 78.9616862988221 117.054 180.824396782842 71.8729076255425 90.849 0 0 cat,chimp,cow,dog,elephant,guinea_pig,horse,human,macaque,orangutan,rabbit, antisense antisense A549@0.0041445,AG04450@0,BJ@0,GM12878@0,H1HESC@2.70707,HELAS3@0.0509965,HEPG2@0.0821675,HMEC@0.021867,HSMM@0,HUVEC@0.0209315,K562@0,MCF7@0.100412,NHEK@0.006926,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000203520.3 ENST00000542805.1 chr11:63383780-63389143 2 571 4790 intergenic 1.11 0 0,0,0 0 0,0,0 0 0 0 2.51138353765324 0 0 2.63747810858144 0 0 0 0 chimp,cow,human,marmoset,orangutan,pig, antisense antisense A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000256789.1 ENST00000540307.1 chr11:63405149-63426434 3 420 20861 exonic -4.60 0 0,1,0 0 0,0,0 116.678571428571 9.29207612290878 0 145.17380952381 15.9082019078664 1.488 123.502380952381 69.9098796797852 1.554 0 0 cat,chimp,cow,dog,elephant,guinea_pig,horse,human,macaque,marmoset,mouse,opossum,orangutan,pig,rabbit,rat, antisense antisense A549@0,AG04450@0.0055675,BJ@0,GM12878@0,H1HESC@0,HELAS3@0.0053415,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000256481.1 ENST00000544948.1 chr11:63849162-63854647 3 729 4752 intronic 2.70 0 0,0,0 0 0,0,0 0 3.62478956228956 0 13.2578875171468 18.1492003367003 0 14.3196159122085 18.545664983165 0 0 0 chimp,dog,elephant,guinea_pig,human,macaque,marmoset,orangutan,rabbit, antisense antisense A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0.00179967,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000256341.1 ENST00000543817.1 chr11:63885744-63886682 2 573 363 exonic 2.21 0 0,0,1 0 0,0,0 10.9738219895288 0 9.805 74.7888307155323 4.09917355371901 41.049 91.2478184991274 8.20936639118457 45.757 0 0 cat,chimp,cow,dog,elephant,guinea_pig,horse,human,macaque,marmoset,mouse,orangutan,panda,pig,rat, antisense antisense A549@0.0163345,AG04450@0.0064785,BJ@0.013554,GM12878@0.0050585,H1HESC@0.0106095,HELAS3@0.0310875,HEPG2@0.011209,HMEC@0,HSMM@0.0032945,HUVEC@0.005965,K562@0.00951,MCF7@0.02636,NHEK@0.00744533,NHLF@0.00152,SKNSHRA@0.001334, 0 0 0 0 ENSG00000256116.1 ENST00000534988.1 chr11:63996686-64001764 2 921 4155 exonic -1.60 0 1,1,1 1 0,0,0 164.186753528773 18.5468110709988 133.726 135.056460369164 50.6539109506618 274.878 147.064060803474 52.5326113116727 257.303 0 0 cat,chimp,cow,dog,elephant,guinea_pig,horse,human,macaque,marmoset,mouse,opossum,orangutan,panda,pig, antisense antisense A549@0.098929,AG04450@0.130929,BJ@0.177146,GM12878@0.206931,H1HESC@0.232323,HELAS3@0.594526,HEPG2@1.07275,HMEC@0.039926,HSMM@0.033042,HUVEC@0.260277,K562@0.196896,MCF7@0.327823,NHEK@0.118712,NHLF@0.201928,SKNSHRA@2.74503, 0 0 0 0 ENSG00000256116.1 ENST00000539963.1 chr11:63998695-64001824 2 225 2902 exonic 0 0 0,1,0 1 0,0,0 0 19.2929014472777 147.588 11.56 61.9531357684356 274.878 10.36 64.6402481047553 257.303 0 0 chimp,cow,dog,elephant,human,macaque,marmoset,orangutan,pig, antisense antisense A549@0.098929,AG04450@0.130929,BJ@0.177146,GM12878@0.206931,H1HESC@0.232323,HELAS3@0.594526,HEPG2@1.07275,HMEC@0.039926,HSMM@0.033042,HUVEC@0.260277,K562@0.196896,MCF7@0.327823,NHEK@0.118712,NHLF@0.201928,SKNSHRA@2.74503, 0 0 0 0 ENSG00000256940.1 ENST00000544553.1 chr11:64013436-64015689 2 389 1862 exonic 3.09 0 1,1,1 1 0,0,0 14.9460154241645 108.838345864662 325.388 0 151.940386680988 275.235 0 152.019334049409 199.065 0 0 elephant,human,macaque,orangutan, antisense antisense A549@1.28472,AG04450@0.914676,BJ@2.53932,GM12878@0.10551,H1HESC@0.509841,HELAS3@2.22267,HEPG2@0.713474,HMEC@3.59812,HSMM@4.62332,HUVEC@1.55386,K562@0.441102,MCF7@1.02575,NHEK@6.29937,NHLF@1.01005,SKNSHRA@1.21931, 0 0 0 0 ENSG00000256940.1 ENST00000538355.1 chr11:64014526-64015649 2 429 692 intergenic -4.86 0 1,1,1 1 0,0,0 0 10.1734104046243 195.617 0 25.7413294797688 265.1 0 25.4696531791908 265.435 0 0 cat,chimp,cow,horse,human,macaque,marmoset, antisense antisense A549@1.28472,AG04450@0.914676,BJ@2.53932,GM12878@0.10551,H1HESC@0.509841,HELAS3@2.22267,HEPG2@0.713474,HMEC@3.59812,HSMM@4.62332,HUVEC@1.55386,K562@0.441102,MCF7@1.02575,NHEK@6.29937,NHLF@1.01005,SKNSHRA@1.21931, 0 0 0 0 ENSG00000236935.1 ENST00000447028.1 chr11:64092522-64096976 3 669 3781 intergenic 6.57 1 0,0,1 0 0,0,0 0 0 0 0 0 2.151 0 0 2.259 0 0 chimp,human,marmoset,orangutan, antisense antisense A549@0.00646,AG04450@0,BJ@0,GM12878@2.06912,H1HESC@0.0552185,HELAS3@0.052943,HEPG2@0,HMEC@0.012186,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0.0116577,NHLF@0.0318105,SKNSHRA@0.006764, 0 0 0 0 ENSG00000231680.1 ENST00000457725.1 chr11:64161814-64163303 2 983 504 intergenic 1.56 1 0,0,1 0 0,0,0 0 0 0 0 0 4.245 0 0 4.335 0 0 chimp,human,macaque,marmoset,orangutan, lincRNA lincRNA A549@0,AG04450@0.004551,BJ@0,GM12878@0,H1HESC@0.187571,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0.0188005,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0.001959,SKNSHRA@0, 0 0 0 0 ENSG00000224456.1 ENST00000452309.1 chr11:64177548-64187687 3 416 9719 intergenic 5.58 0 0,0,1 0 0,0,0 0 0 0 5.36538461538461 0 8.232 25.4375 6.18592447782694 8.4 0 0 chimp,cow,guinea_pig,human,macaque,marmoset,orangutan, antisense antisense A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000231492.1 ENST00000449694.1 chr11:64195633-64200142 3 311 4194 intergenic 2.72 0 0,0,0 0 0,0,0 0 7.55126371006199 0 0 7.35431568907964 0 0 7.50381497377206 0 0 0 NA lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0.008452,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000232500.1 ENST00000444862.1 chr11:64268325-64272858 3 519 4010 intergenic 1.12 0 0,1,1 0 0,0,0 0 0 0 0 0 0 0 0 0 0 0 chimp,human,orangutan, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0.008896,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000237410.1 ENST00000433606.1 chr11:64413871-64427153 2 467 12813 intronic -0.76 0 0,0,0 0 0,0,0 0 76.6674471240147 8.151 0 90.9505190041364 4.199 0 85.6703348162023 5.731 0 0 chimp,dog,guinea_pig,horse,human,macaque,orangutan,panda,pig, antisense antisense A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000228732.1 ENST00000428350.1 chr11:64418767-64423783 2 905 4109 exonic 4.18 1 0,1,1 0 0,0,0 216.450828729282 73.2314431735216 228.422 483.265193370166 124.073010464833 194.591 494.380110497238 113.264541250913 193.099 0 0 chimp,cow,dog,guinea_pig,horse,human,macaque,marmoset,orangutan,panda,pig,rabbit, antisense antisense A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0.036042,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0.0195715, 0 0 0 0 ENSG00000229719.1 ENST00000413053.1 chr11:64658898-64660921 2 1779 242 intergenic 3.22 1 0,0,0 0 0,0,0 15.8999437886453 0 67.083 35.1287240022485 7.56198347107438 31.287 41.2973580663294 7.43801652892562 33.388 0 0 chimp,human,macaque,marmoset,orangutan, lincRNA lincRNA A549@1.17914,AG04450@0.0013225,BJ@0.009085,GM12878@0.0528805,H1HESC@0.028271,HELAS3@0.873621,HEPG2@1.42221,HMEC@0,HSMM@0.031511,HUVEC@0.0057665,K562@0.0226385,MCF7@0.051022,NHEK@0.0104327,NHLF@0.0010835,SKNSHRA@0.034675, 0 0 0 0 ENSG00000254501.1 ENST00000528887.1 chr11:64878186-64879167 2 542 437 exonic 4.22 0 1,1,1 0 0,0,0 242.514760147601 25.5377574370709 20.837 338.330258302583 0 87.207 353.343173431734 0 92.622 0 0 cat,chimp,cow,dog,elephant,guinea_pig,horse,human,macaque,marmoset,mouse,opossum,orangutan,panda,pig,rabbit,rat, antisense antisense A549@0.065986,AG04450@0.011855,BJ@0.023795,GM12878@0.0107515,H1HESC@0.273076,HELAS3@0.313744,HEPG2@0.256059,HMEC@0.007527,HSMM@0,HUVEC@0.0044695,K562@0.042036,MCF7@0.104187,NHEK@0.012016,NHLF@0,SKNSHRA@0.46407, 0 0 0 0 ENSG00000255173.1 ENST00000527789.1 chr11:64884629-64884930 2 173 126 exonic 0 0 0,1,1 0 0,0,0 110.843930635838 0 38.694 158.011560693642 253.420634920635 206.491 131.277456647399 273.81746031746 198.725 0 0 cat,chimp,cow,dog,elephant,guinea_pig,horse,human,macaque,marmoset,mouse,orangutan,panda,pig,rabbit,rat, antisense antisense A549@0,AG04450@0.0169165,BJ@0,GM12878@0,H1HESC@0.01414,HELAS3@0,HEPG2@0.0654415,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0.117065,NHEK@0.00729467,NHLF@0,SKNSHRA@0.20764, 0 0 0 0 ENSG00000255478.1 ENST00000533886.1 chr11:65134909-65142770 3 561 7296 exonic -2.67 1 0,0,1 0 0,0,0 0 0 0 0 1.29043311403509 0 0 30.7619243421053 0 0 1 human,macaque,marmoset,orangutan, antisense antisense A549@0.0119595,AG04450@0.010498,BJ@0,GM12878@0,H1HESC@0.003678,HELAS3@0.0329395,HEPG2@0.083116,HMEC@0,HSMM@0,HUVEC@0,K562@0.048929,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 1 96 0 0 ENSG00000245532.2 ENST00000499732.1 chr11:65190245-65192232 2 1743 242 intergenic 3.08 0 1,1,1 1 0,0,0 94.2943201376936 36.2066115702479 0 116.003442340792 39.1694214876033 57.194 136.81124497992 69.2479338842975 58.511 0 0 cat,chimp,cow,dog,elephant,horse,human,macaque,marmoset,panda,pig, lincRNA processed_transcript A549@63.0179,AG04450@36.0476,BJ@62.8423,GM12878@36.9176,H1HESC@2.84572,HELAS3@119.279,HEPG2@35.0329,HMEC@16.5362,HSMM@10.1336,HUVEC@110.943,K562@40.1312,MCF7@63.1715,NHEK@66.8934,NHLF@26.7449,SKNSHRA@156.793, 0 0 0 0 ENSG00000245532.2 ENST00000501122.2 chr11:65190269-65213011 1 22742 0 intergenic 4.94 0 0,1,1 1 0,0,0 7.98544543136048 0 0 12.842054348782 0 60.814 15.6613314572157 0 62.121 0 0 human,orangutan lincRNA non_coding A549@63.0179,AG04450@36.0476,BJ@62.8423,GM12878@36.9176,H1HESC@2.84572,HELAS3@119.279,HEPG2@35.0329,HMEC@16.5362,HSMM@10.1336,HUVEC@110.943,K562@40.1312,MCF7@63.1715,NHEK@66.8934,NHLF@26.7449,SKNSHRA@156.793, 0 0 0 0 ENSG00000251562.3 ENST00000534336.1 chr11:65265233-65273940 1 8707 0 exonic 1.72 1 0,1,1 1 0,1,0 227.238658550591 0 0 204.578500057425 0 26.47 191.947972895372 0 34.117 1 1 chimp,human,macaque,marmoset,orangutan, lincRNA non_coding A549@255.079,AG04450@396.496,BJ@361.471,GM12878@110.76,H1HESC@46.1705,HELAS3@223.874,HEPG2@98.3902,HMEC@83.4261,HSMM@46.2177,HUVEC@154.279,K562@305.63,MCF7@256.565,NHEK@335.575,NHLF@57.36,SKNSHRA@373.589, 0 0 0 0 ENSG00000251562.3 ENST00000544868.1 chr11:65266516-65271100 1 4584 0 exonic -0.33 0 1,1,1 1 0,1,0 189.488001745201 0 0 168.762870855148 0 16.787 158.720113438045 0 18.764 1 1 chimp,human,macaque,marmoset,orangutan, lincRNA processed_transcript A549@255.079,AG04450@396.496,BJ@361.471,GM12878@110.76,H1HESC@46.1705,HELAS3@223.874,HEPG2@98.3902,HMEC@83.4261,HSMM@46.2177,HUVEC@154.279,K562@305.63,MCF7@256.565,NHEK@335.575,NHLF@57.36,SKNSHRA@373.589, 0 0 0 0 ENSG00000251562.3 ENST00000508832.1 chr11:65269807-65271080 2 1029 242 exonic -1.44 0 1,1,1 0 0,0,0 342.251700680272 166.181818181818 310.389 307.461613216715 205 256.551 275.934888241011 235.995867768595 259.186 0 0 cat,chimp,dog,elephant,guinea_pig,horse,human,macaque,marmoset,mouse,orangutan,panda,rabbit,rat, lincRNA processed_transcript A549@255.079,AG04450@396.496,BJ@361.471,GM12878@110.76,H1HESC@46.1705,HELAS3@223.874,HEPG2@98.3902,HMEC@83.4261,HSMM@46.2177,HUVEC@154.279,K562@305.63,MCF7@256.565,NHEK@335.575,NHLF@57.36,SKNSHRA@373.589, 0 0 0 0 ENSG00000255557.1 ENST00000534505.1 chr11:65513200-65539056 2 462 25392 intergenic 4.27 0 0,0,0 0 0,0,0 0 0 0 0 0 0 0 4.45018115942029 0 1 1 chimp,human,macaque,marmoset,orangutan, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0.0114395,HEPG2@0.005879,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000254470.1 ENST00000532090.1 chr11:65543364-65547496 1 4132 0 intergenic 122.90 0 0,0,1 0 0,0,1 52.9160212971926 0 82.594 114.696999031946 0 182.576 117.297434656341 0 174.949 0 1 chimp,human,macaque,orangutan, processed_transcript processed_transcript A549@2.31049,AG04450@1.18129,BJ@2.39268,GM12878@2.28437,H1HESC@4.11035,HELAS3@5.65008,HEPG2@3.1837,HMEC@2.39346,HSMM@1.48162,HUVEC@4.53927,K562@2.95317,MCF7@3.34613,NHEK@2.50258,NHLF@1.16795,SKNSHRA@1.91714, 0 0 0 0 ENSG00000255120.1 ENST00000534178.1 chr11:65556522-65557346 2 491 331 intronic 4.58 1 0,0,1 0 0,0,0 78.7087576374745 44.0332326283988 15.296 93.4541751527495 162.435045317221 0 96.8737270875764 172.861027190332 4.662 0 0 cat,chimp,cow,dog,elephant,guinea_pig,horse,human,macaque,marmoset,orangutan,panda,pig, antisense antisense A549@0,AG04450@0,BJ@0.004984,GM12878@0.0081615,H1HESC@0,HELAS3@0.0577405,HEPG2@0,HMEC@0.01735,HSMM@0,HUVEC@0,K562@0,MCF7@0.029924,NHEK@0.0237873,NHLF@0,SKNSHRA@0.004807, 0 0 0 0 ENSG00000255120.1 ENST00000527453.1 chr11:65556522-65557492 2 470 498 intronic 4.58 1 0,1,1 0 0,0,0 82.2255319148936 29.2670682730924 15.296 91.1702127659574 114.060240963855 0 93.8723404255319 121.81124497992 4.662 0 0 cat,chimp,cow,dog,elephant,guinea_pig,horse,human,macaque,marmoset,orangutan,panda,pig,rat, antisense antisense A549@0,AG04450@0,BJ@0.004984,GM12878@0.0081615,H1HESC@0,HELAS3@0.0577405,HEPG2@0,HMEC@0.01735,HSMM@0,HUVEC@0,K562@0,MCF7@0.029924,NHEK@0.0237873,NHLF@0,SKNSHRA@0.004807, 0 0 0 0 ENSG00000255120.1 ENST00000532454.1 chr11:65556522-65558339 2 492 1323 intronic 4.58 1 0,0,1 0 0,0,0 78.5487804878049 22.578231292517 21.114 87.0934959349593 42.9342403628118 22.605 89.6747967479675 49.3756613756614 40.509 0 0 cat,chimp,cow,dog,elephant,guinea_pig,horse,human,macaque,marmoset,orangutan,panda,pig, antisense antisense A549@0,AG04450@0,BJ@0.004984,GM12878@0.0081615,H1HESC@0,HELAS3@0.0577405,HEPG2@0,HMEC@0.01735,HSMM@0,HUVEC@0,K562@0,MCF7@0.029924,NHEK@0.0237873,NHLF@0,SKNSHRA@0.004807, 0 0 0 0 ENSG00000255404.1 ENST00000531155.1 chr11:65563417-65564690 2 1042 229 exonic 4.19 0 0,1,0 0 0,0,0 76.7514395393474 0 0 73.4213051823417 0 0 70.3368522072937 0 2.259 0 0 chimp,cow,dog,guinea_pig,horse,human,macaque,orangutan,pig,rat, antisense antisense A549@0.007132,AG04450@0,BJ@0,GM12878@0.0075335,H1HESC@0.021332,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0.021321,NHEK@0.0193403,NHLF@0,SKNSHRA@0.0234815, 0 0 0 0 ENSG00000175513.4 ENST00000532620.1 chr11:65712916-65727434 8 1917 12587 intergenic 87.09 0 0,1,1 0 0,1,1 30.7188315075639 0.823548105187892 0 107.547730829421 1.52220545006753 2.629 109.802295252999 1.50218479383491 2.673 0 0 cat,chimp,cow,dog,elephant,guinea_pig,horse,human,macaque,marmoset,mouse,orangutan,panda,pig,rat, lincRNA lincRNA A549@0,AG04450@0.0063665,BJ@0,GM12878@0.0020945,H1HESC@1.12888,HELAS3@0.0100075,HEPG2@0.0154285,HMEC@0,HSMM@0.0298315,HUVEC@0.0033675,K562@0.0027515,MCF7@0.003652,NHEK@0,NHLF@0.0060815,SKNSHRA@0.009644, 0 0 0 0 ENSG00000175513.4 ENST00000533763.1 chr11:65713115-65727434 8 1581 12724 intergenic 45.16 0 0,0,1 1 0,1,1 37.247311827957 0.81468091795033 0 114.943074003795 2.90121031122289 8.63 120.346616065781 2.57709839673059 8.305 0 0 cat,chimp,cow,dog,elephant,guinea_pig,horse,human,macaque,marmoset,mouse,orangutan,panda,pig,rabbit,rat, lincRNA lincRNA A549@0,AG04450@0.0063665,BJ@0,GM12878@0.0020945,H1HESC@1.12888,HELAS3@0.0100075,HEPG2@0.0154285,HMEC@0,HSMM@0.0298315,HUVEC@0.0033675,K562@0.0027515,MCF7@0.003652,NHEK@0,NHLF@0.0060815,SKNSHRA@0.009644, 0 0 0 0 ENSG00000175513.4 ENST00000534740.1 chr11:65713115-65727434 5 717 13594 intergenic 9.41 0 0,0,1 1 0,1,1 68.4644351464435 1.48337501839047 0 197.02649930265 5.79630719435045 8.63 200.672245467225 5.93761953803148 8.305 0 0 cat,chimp,cow,dog,elephant,guinea_pig,horse,human,macaque,marmoset,mouse,opossum,orangutan,panda,pig,rabbit,rat, lincRNA lincRNA A549@0,AG04450@0.0063665,BJ@0,GM12878@0.0020945,H1HESC@1.12888,HELAS3@0.0100075,HEPG2@0.0154285,HMEC@0,HSMM@0.0298315,HUVEC@0.0033675,K562@0.0027515,MCF7@0.003652,NHEK@0,NHLF@0.0060815,SKNSHRA@0.009644, 0 0 0 0 ENSG00000175513.4 ENST00000531518.1 chr11:65713127-65714767 2 626 1012 intergenic -0.01 0 0,0,0 1 0,1,1 15.6533546325879 0 0 55.0095846645367 2.12549407114625 9.825 59.3769968051118 2.16106719367589 9.56 0 0 cat,chimp,cow,dog,elephant,guinea_pig,horse,human,macaque,marmoset,mouse,orangutan,panda,pig,rabbit,rat, lincRNA retained_intron A549@0,AG04450@0.0063665,BJ@0,GM12878@0.0020945,H1HESC@1.12888,HELAS3@0.0100075,HEPG2@0.0154285,HMEC@0,HSMM@0.0298315,HUVEC@0.0033675,K562@0.0027515,MCF7@0.003652,NHEK@0,NHLF@0.0060815,SKNSHRA@0.009644, 0 0 0 0 ENSG00000175513.4 ENST00000528291.1 chr11:65713162-65714830 3 560 1104 intergenic 2.47 0 0,0,0 1 0,1,1 17.4982142857143 0 0 60.5821428571429 2.17934782608696 9.825 64.0839285714286 2.88134057971014 9.56 0 0 cat,chimp,cow,dog,elephant,guinea_pig,horse,human,macaque,marmoset,mouse,orangutan,panda,pig,rabbit,rat, lincRNA lincRNA A549@0,AG04450@0.0063665,BJ@0,GM12878@0.0020945,H1HESC@1.12888,HELAS3@0.0100075,HEPG2@0.0154285,HMEC@0,HSMM@0.0298315,HUVEC@0.0033675,K562@0.0027515,MCF7@0.003652,NHEK@0,NHLF@0.0060815,SKNSHRA@0.009644, 0 0 0 0 ENSG00000255320.1 ENST00000531086.1 chr11:66012311-66013710 2 395 1002 intergenic -2.21 1 0,0,1 0 0,0,0 0 0 0 0 0 0 0 0 0 0 0 cat,chimp,dog,horse,human,macaque,marmoset,orangutan,panda, antisense antisense A549@0.35783,AG04450@0.027822,BJ@0.036523,GM12878@0.342681,H1HESC@0.0399035,HELAS3@0.111389,HEPG2@0.0053665,HMEC@0.030942,HSMM@0.005742,HUVEC@0.134528,K562@0.024408,MCF7@0.005064,NHEK@0.0160773,NHLF@0.0486575,SKNSHRA@0.437408, 0 0 0 0 ENSG00000254461.1 ENST00000533576.1 chr11:66027038-66029305 3 536 1727 exonic -1.59 0 0,0,1 0 0,0,0 76.1194029850746 0 106.78 86.2033582089552 4.05327156919514 116.109 109.850746268657 6.60914881297047 136.962 0 0 cat,chimp,dog,elephant,guinea_pig,horse,human,macaque,marmoset,mouse,opossum,orangutan,panda,pig,rat, antisense antisense A549@0.020533,AG04450@0.056216,BJ@0.0874425,GM12878@0.07201,H1HESC@0.103428,HELAS3@0.278371,HEPG2@0.09997,HMEC@0.015193,HSMM@0.041469,HUVEC@0.0290865,K562@0.017729,MCF7@0.129778,NHEK@0.00473667,NHLF@0.035999,SKNSHRA@0.393925, 0 0 0 0 ENSG00000254855.1 ENST00000530805.1 chr11:66032248-66033137 3 476 409 exonic -7.47 0 0,1,0 0 0,0,0 43.0063025210084 54.5036674816626 14.392 81.7226890756303 93.6112469437653 207.259 89.2436974789916 111.117359413203 221.479 0 0 cat,chimp,dog,elephant,guinea_pig,horse,human,macaque,marmoset,orangutan,panda,pig, antisense antisense A549@0.0140815,AG04450@0.050982,BJ@0.0289315,GM12878@0.029257,H1HESC@0.0510275,HELAS3@0.086443,HEPG2@0.0474445,HMEC@0,HSMM@0.045057,HUVEC@0.010152,K562@0.0048475,MCF7@0.00849,NHEK@0.00551233,NHLF@0.016581,SKNSHRA@0.227766, 0 0 0 0 ENSG00000254762.1 ENST00000533287.1 chr11:66035106-66035600 2 270 222 exonic 0 0 0,0,1 0 0,0,0 0 0 65.493 96.3481481481481 99.9279279279279 234.179 80.1888888888889 86.0630630630631 226.49 0 0 cat,chimp,cow,dog,horse,human,macaque,marmoset,orangutan,pig, antisense antisense A549@0,AG04450@0,BJ@0.026308,GM12878@0.0195255,H1HESC@0,HELAS3@0,HEPG2@0.020057,HMEC@0.015054,HSMM@0,HUVEC@0,K562@0.017073,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000245156.1 ENST00000501708.1 chr11:66037303-66045996 2 2790 5901 exonic 0.84 0 0,0,1 0 0,0,0 50.4071684587814 52.8371462463989 54.731 68.4455197132616 124.103880698187 112.222 78.1663082437276 129.554143365531 103.238 0 1 chimp,human,macaque,orangutan, lincRNA lincRNA A549@0.002416,AG04450@0.000803,BJ@0.0017335,GM12878@0.003774,H1HESC@0,HELAS3@0.0024455,HEPG2@0.004481,HMEC@0,HSMM@0,HUVEC@0.002318,K562@0.001711,MCF7@0.003617,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000254452.1 ENST00000526951.1 chr11:66044250-66044958 2 451 255 exonic -2.41 0 1,1,1 0 0,0,0 171.658536585366 35.7176470588235 87.033 343.968957871397 210.078431372549 164.613 344.966740576497 226.258823529412 197.512 0 0 chimp,dog,elephant,guinea_pig,horse,human,macaque,marmoset,mouse,orangutan,panda,rat, antisense antisense A549@0.0057545,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0.014136,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0.008148,NHLF@0.00402,SKNSHRA@0, 0 0 0 0 ENSG00000254452.1 ENST00000528650.1 chr11:66044340-66044963 2 478 143 exonic -3.04 0 1,1,1 0 0,0,0 186.213389121339 0 87.033 417.230125523013 44.3076923076923 164.538 419.412133891213 65.0839160839161 197.912 0 0 chimp,dog,elephant,guinea_pig,horse,human,macaque,marmoset,mouse,orangutan,panda,rat, antisense antisense A549@0.0057545,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0.014136,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0.008148,NHLF@0.00402,SKNSHRA@0, 0 0 0 0 ENSG00000254458.1 ENST00000534065.1 chr11:66080324-66086708 2 542 5840 encompassing -1.48 0 0,1,0 0 0,0,0 0 119.973116438356 0 4.85055350553506 144.098116438356 4.634 6.27675276752768 136.484075342466 4.606 0 0 human,macaque,marmoset,orangutan,panda, antisense antisense A549@0,AG04450@0.010884,BJ@0,GM12878@0,H1HESC@0.0092765,HELAS3@0.08296,HEPG2@0.036055,HMEC@0.015054,HSMM@0.034041,HUVEC@0,K562@0.026842,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0.0552245, 0 0 0 0 ENSG00000254756.1 ENST00000526655.1 chr11:66101965-66107346 3 513 4864 exonic 8.88 0 0,1,1 0 0,0,0 91.037037037037 48.4081003289474 81.99 204 116.621710526316 153.121 212.781676413255 114.900493421053 152.974 0 0 cat,chimp,cow,dog,elephant,guinea_pig,horse,human,macaque,marmoset,mouse,orangutan,panda,pig,rat, antisense antisense A549@0,AG04450@0.043331,BJ@0.06439,GM12878@0,H1HESC@0.0040205,HELAS3@0.0491405,HEPG2@0.037004,HMEC@0.007935,HSMM@0.0044175,HUVEC@0,K562@0,MCF7@0,NHEK@0.00255867,NHLF@0.007521,SKNSHRA@0.015175, 0 0 0 0 ENSG00000254510.1 ENST00000527061.1 chr11:66176629-66177474 2 465 378 intergenic 1.47 0 0,1,0 1 0,0,0 53.1720430107527 20.5 31.286 111.150537634409 27.3280423280423 85.992 108.578494623656 23.1269841269841 84.814 0 0 cat,chimp,dog,guinea_pig,horse,human,marmoset,orangutan,panda,pig,rat, antisense antisense A549@0.0089155,AG04450@0.192567,BJ@0.577144,GM12878@0.006329,H1HESC@0.680519,HELAS3@0.020463,HEPG2@0,HMEC@0,HSMM@0.0068085,HUVEC@0,K562@0,MCF7@0.0043375,NHEK@0.00278533,NHLF@0.0778315,SKNSHRA@0.0156185, 0 0 0 0 ENSG00000254510.1 ENST00000533759.1 chr11:66176665-66184608 4 944 6993 intergenic 2.80 1 0,1,1 1 0,0,0 80.5148305084746 6.2004862004862 41.834 97.5773305084746 15.5209495209495 107.088 87.8262711864407 16.5970255970256 105.298 0 0 cat,chimp,cow,dog,elephant,guinea_pig,horse,human,macaque,orangutan,panda,pig, antisense lincRNA A549@0.0089155,AG04450@0.192567,BJ@0.577144,GM12878@0.006329,H1HESC@0.680519,HELAS3@0.020463,HEPG2@0,HMEC@0,HSMM@0.0068085,HUVEC@0,K562@0,MCF7@0.0043375,NHEK@0.00278533,NHLF@0.0778315,SKNSHRA@0.0156185, 0 0 0 0 ENSG00000254510.1 ENST00000526186.1 chr11:66178143-66184598 2 635 5818 intergenic 2.12 1 0,0,1 0 0,0,0 89.2740157480315 6.12083190099691 0 103.23937007874 14.0768305259539 16.309 90.3653543307087 15.6022688209007 16.547 0 0 chimp,cow,dog,elephant,horse,human,macaque,orangutan,panda,pig, antisense antisense A549@0.0089155,AG04450@0.192567,BJ@0.577144,GM12878@0.006329,H1HESC@0.680519,HELAS3@0.020463,HEPG2@0,HMEC@0,HSMM@0.0068085,HUVEC@0,K562@0,MCF7@0.0043375,NHEK@0.00278533,NHLF@0.0778315,SKNSHRA@0.0156185, 0 0 0 0 ENSG00000255517.1 ENST00000527092.1 chr11:66240961-66247702 4 824 5911 exonic 17.11 0 0,1,0 1 0,0,0 74.2766990291262 83.5295212316021 22.081 78.8992718446602 76.2552867535104 49.016 79.3919902912621 70.7638301471832 43.383 0 0 cat,chimp,cow,dog,guinea_pig,horse,human,macaque,marmoset,opossum,orangutan,panda, antisense antisense A549@0.897562,AG04450@0.399278,BJ@0.733979,GM12878@0.30129,H1HESC@1.00189,HELAS3@1.37686,HEPG2@1.40465,HMEC@0.418029,HSMM@0.714758,HUVEC@1.51933,K562@0.258849,MCF7@1.34621,NHEK@0.556131,NHLF@0.321709,SKNSHRA@1.24093, 0 0 0 0 ENSG00000255517.1 ENST00000533502.1 chr11:66241830-66247663 3 578 5251 exonic 1.28 0 1,1,1 1 0,0,0 0 86.8068939249667 22.081 0 77.2991811083603 49.016 0 72.0321843458389 43.383 0 0 chimp,horse,human,macaque,marmoset,orangutan,panda, antisense antisense A549@0.897562,AG04450@0.399278,BJ@0.733979,GM12878@0.30129,H1HESC@1.00189,HELAS3@1.37686,HEPG2@1.40465,HMEC@0.418029,HSMM@0.714758,HUVEC@1.51933,K562@0.258849,MCF7@1.34621,NHEK@0.556131,NHLF@0.321709,SKNSHRA@1.24093, 0 0 0 0 ENSG00000255517.1 ENST00000527274.1 chr11:66244964-66247702 2 795 1941 exonic -5.51 0 0,1,0 1 0,0,0 0 0 22.081 0 0.738794435857805 49.016 0 0.751159196290572 43.383 0 0 chimp,elephant,guinea_pig,human,macaque,marmoset,orangutan, antisense antisense A549@0.897562,AG04450@0.399278,BJ@0.733979,GM12878@0.30129,H1HESC@1.00189,HELAS3@1.37686,HEPG2@1.40465,HMEC@0.418029,HSMM@0.714758,HUVEC@1.51933,K562@0.258849,MCF7@1.34621,NHEK@0.556131,NHLF@0.321709,SKNSHRA@1.24093, 0 0 0 0 ENSG00000255517.1 ENST00000525142.1 chr11:66245191-66247704 2 565 1946 exonic -5.51 0 0,1,0 1 0,0,0 0 0 22.081 0 0.736896197327852 49.016 0 0.749229188078109 43.383 0 0 cat,chimp,cow,elephant,guinea_pig,human,macaque,orangutan,panda,rat, antisense antisense A549@0.897562,AG04450@0.399278,BJ@0.733979,GM12878@0.30129,H1HESC@1.00189,HELAS3@1.37686,HEPG2@1.40465,HMEC@0.418029,HSMM@0.714758,HUVEC@1.51933,K562@0.258849,MCF7@1.34621,NHEK@0.556131,NHLF@0.321709,SKNSHRA@1.24093, 0 0 0 0 ENSG00000250105.1 ENST00000504911.1 chr11:66326337-66327855 2 578 938 intergenic -0.96 1 0,0,0 0 0,0,0 90.2283737024221 77.7867803837953 100.898 108.484429065744 117.579957356077 134.468 123.994809688581 151.746268656716 143.435 0 0 cat,chimp,elephant,horse,human,macaque,marmoset,orangutan,panda,pig, lincRNA lincRNA A549@0,AG04450@0,BJ@0.0256725,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0.0343365,K562@0.004616,MCF7@0.00709,NHEK@0,NHLF@0,SKNSHRA@0.023972, 0 0 0 0 ENSG00000255698.1 ENST00000541406.1 chr11:67180162-67181038 2 310 564 intronic -0.10 0 0,0,0 0 0,0,0 0 0 0 0 0 0 0 0 2.008 1 1 chimp,human,macaque,marmoset,orangutan, antisense antisense A549@0,AG04450@0,BJ@0,GM12878@0.04242,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000255949.1 ENST00000535922.1 chr11:67198838-67202870 2 468 3562 exonic -3.12 0 1,1,1 0 0,0,0 122.709401709402 100.479505895564 82.439 186.523504273504 139.747052217855 110.636 190.205128205128 147.729365524986 106.662 0 0 cat,chimp,cow,dog,elephant,guinea_pig,horse,human,macaque,marmoset,mouse,opossum,orangutan,panda,pig,rabbit, antisense antisense A549@0.026105,AG04450@0,BJ@0.027541,GM12878@0.426682,H1HESC@0.012646,HELAS3@0.005647,HEPG2@0.059638,HMEC@0,HSMM@0.0079605,HUVEC@0.025328,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0.027421, 0 0 0 0 ENSG00000255119.1 ENST00000533876.1 chr11:67372992-67374113 2 553 566 exonic 0.38 0 0,1,0 0 0,0,0 0 18.4628975265018 0 0 0 12.495 0 0 12.7 0 0 horse,human,marmoset, antisense antisense A549@0.007822,AG04450@0.051833,BJ@0.004436,GM12878@0,H1HESC@0.0276655,HELAS3@0.0300835,HEPG2@0.0831375,HMEC@0.022133,HSMM@0,HUVEC@0.037784,K562@1.3433,MCF7@0,NHEK@0.00475767,NHLF@0.0070315,SKNSHRA@0.004095, 0 0 0 0 ENSG00000255318.1 ENST00000533311.1 chr11:67385750-67394775 2 829 8194 intergenic 0.58 0 0,0,0 0 0,0,0 0 0 38.25 0 0 67.335 5.27623642943305 0 71.176 0 0 chimp,human,macaque,marmoset,orangutan,pig, lincRNA lincRNA A549@0.0496915,AG04450@0.0077605,BJ@0.0215025,GM12878@0.12174,H1HESC@0.35814,HELAS3@0.173097,HEPG2@0.258849,HMEC@0.004927,HSMM@0,HUVEC@0.005852,K562@0.361283,MCF7@0.121913,NHEK@0.0158097,NHLF@0.00934,SKNSHRA@0.157036, 0 0 0 0 ENSG00000256848.1 ENST00000545079.1 chr11:67612673-67616144 2 2894 575 intergenic 4.99 0 0,0,0 0 0,0,0 0 0 0 0 0 0 0 0 0 0 0 NA lincRNA lincRNA A549@0.09591,AG04450@0,BJ@0.0017005,GM12878@0.0214955,H1HESC@0.168237,HELAS3@0.003121,HEPG2@0.021647,HMEC@0.019794,HSMM@0.013742,HUVEC@0,K562@0.022992,MCF7@0.140398,NHEK@0.162736,NHLF@0,SKNSHRA@0.0015695, 61 2 0 0 ENSG00000251637.2 ENST00000529069.1 chr11:67653948-67661564 3 597 7015 intergenic -5.27 1 1,1,1 0 0,0,0 0 0 0 30.7470686767169 1.44946543121882 0 10.8458961474037 3.31717747683535 0 0 1 chimp,human,orangutan, lincRNA lincRNA A549@0,AG04450@0.000952,BJ@0.0021125,GM12878@0.549512,H1HESC@0.003245,HELAS3@0.016784,HEPG2@0.077352,HMEC@0,HSMM@0,HUVEC@0,K562@0.01212,MCF7@0.0005935,NHEK@0.0375893,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000251637.2 ENST00000511677.1 chr11:67653967-67658816 2 3385 1462 intergenic -1.42 0 0,1,0 0 0,0,0 0 0 0 3.00384047267356 0 0 6.87444608567208 0 0 0 1 chimp,human,orangutan, lincRNA lincRNA A549@0,AG04450@0.000952,BJ@0.0021125,GM12878@0.549512,H1HESC@0.003245,HELAS3@0.016784,HEPG2@0.077352,HMEC@0,HSMM@0,HUVEC@0,K562@0.01212,MCF7@0.0005935,NHEK@0.0375893,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000251637.2 ENST00000533670.1 chr11:67654061-67673821 3 610 19146 intergenic 4.50 0 0,0,0 0 0,0,0 0 0 0 0 5.031181447822 0 0 6.25519690797033 0 0 0 chimp,human,macaque,marmoset,mouse,orangutan,rat, lincRNA lincRNA A549@0,AG04450@0.000952,BJ@0.0021125,GM12878@0.549512,H1HESC@0.003245,HELAS3@0.016784,HEPG2@0.077352,HMEC@0,HSMM@0,HUVEC@0,K562@0.01212,MCF7@0.0005935,NHEK@0.0375893,NHLF@0,SKNSHRA@0, 137 2 0 0 ENSG00000254610.1 ENST00000527543.1 chr11:67702034-67707245 3 452 4755 intergenic -8.79 0 0,0,0 0 0,0,0 0 0 0 0 2.30599369085173 0 0 55.6058885383806 0 1 1 chimp,human,macaque,marmoset,orangutan, lincRNA lincRNA A549@0.0438775,AG04450@0,BJ@0,GM12878@0,H1HESC@0.476735,HELAS3@0.0102735,HEPG2@0.005995,HMEC@0,HSMM@0.0090445,HUVEC@0,K562@0,MCF7@0.0715,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000006534.11 ENST00000433100.1 chr11:67776048-67796163 10 2267 17830 intergenic 105.98 0 0,0,1 0 0,1,1 90.9973533303926 1.23735277621985 0 279.305249228055 3.50201906898486 42.34 362.190119100132 4.10308468872686 41.636 0 0 cat,chimp,cow,dog,elephant,guinea_pig,horse,human,macaque,orangutan,panda,pig,rat, antisense antisense A549@31.1101,AG04450@7.47147,BJ@16.004,GM12878@0.0019715,H1HESC@0.157822,HELAS3@13.7781,HEPG2@4.67417,HMEC@2.56182,HSMM@16.7802,HUVEC@0.311353,K562@0.059617,MCF7@1.37471,NHEK@0.0479,NHLF@11.318,SKNSHRA@3.14874, 0 0 0 0 ENSG00000006534.11 ENST00000539229.1 chr11:67776048-67796741 13 2836 17833 intergenic 232.47 1 0,0,1 0 0,1,1 79.2563469675599 1.26181797790613 0 153.712623413258 3.54494476532272 42.34 197.05077574048 4.14237649301856 41.636 0 1 chimp,human,macaque,orangutan, antisense antisense A549@31.1101,AG04450@7.47147,BJ@16.004,GM12878@0.0019715,H1HESC@0.157822,HELAS3@13.7781,HEPG2@4.67417,HMEC@2.56182,HSMM@16.7802,HUVEC@0.311353,K562@0.059617,MCF7@1.37471,NHEK@0.0479,NHLF@11.318,SKNSHRA@3.14874, 0 0 0 0 ENSG00000247484.1 ENST00000499964.1 chr11:67776911-67784501 2 5295 2293 intergenic 4.86 1 0,0,1 0 0,0,0 2.43550519357885 0 0 5.50349386213409 16.6232010466638 0 5.5590179414542 14.8159616223288 0 0 1 chimp,human,macaque,orangutan, lincRNA lincRNA A549@0.107161,AG04450@0.019592,BJ@0.041086,GM12878@0.0046375,H1HESC@0.197965,HELAS3@0.237067,HEPG2@0.237023,HMEC@0.005411,HSMM@0.0537465,HUVEC@0.0128555,K562@0.0059265,MCF7@0.0542965,NHEK@0.0140467,NHLF@0.005129,SKNSHRA@0.094457, 0 0 0 0 ENSG00000006534.11 ENST00000316367.6 chr11:67777790-67795607 9 755 17046 intergenic 0 0 0,1,1 1 0,1,1 66.3933774834437 10.4480229965974 0 202.622516556291 16.5705737416403 7.448 221.153642384106 18.2139504869178 7.514 0 0 cat,chimp,cow,dog,elephant,guinea_pig,horse,human,macaque,marmoset,mouse,opossum,orangutan,panda,pig,rabbit,rat, antisense antisense A549@31.1101,AG04450@7.47147,BJ@16.004,GM12878@0.0019715,H1HESC@0.157822,HELAS3@13.7781,HEPG2@4.67417,HMEC@2.56182,HSMM@16.7802,HUVEC@0.311353,K562@0.059617,MCF7@1.37471,NHEK@0.0479,NHLF@11.318,SKNSHRA@3.14874, 0 0 0 0 ENSG00000006534.11 ENST00000007633.8 chr11:67777790-67796741 13 2794 16133 intergenic 232.47 1 1,1,1 1 0,1,1 80.4477451682176 1.39478088390256 0 153.423765211167 2.74270129548131 7.448 197.439155332856 3.17436310667576 7.514 0 1 chimp,human,macaque,orangutan, antisense antisense A549@31.1101,AG04450@7.47147,BJ@16.004,GM12878@0.0019715,H1HESC@0.157822,HELAS3@13.7781,HEPG2@4.67417,HMEC@2.56182,HSMM@16.7802,HUVEC@0.311353,K562@0.059617,MCF7@1.37471,NHEK@0.0479,NHLF@11.318,SKNSHRA@3.14874, 0 0 0 0 ENSG00000006534.11 ENST00000342456.6 chr11:67777790-67796741 11 2688 16243 intergenic 213.65 1 1,1,1 1 0,1,1 83.6201636904762 1.38533522132611 0 152.918154761905 3.87656221141415 7.448 199.045758928571 4.21720125592563 7.514 0 1 chimp,human,macaque,orangutan, antisense antisense A549@31.1101,AG04450@7.47147,BJ@16.004,GM12878@0.0019715,H1HESC@0.157822,HELAS3@13.7781,HEPG2@4.67417,HMEC@2.56182,HSMM@16.7802,HUVEC@0.311353,K562@0.059617,MCF7@1.37471,NHEK@0.0479,NHLF@11.318,SKNSHRA@3.14874, 0 0 0 0 ENSG00000006534.11 ENST00000529232.1 chr11:67777797-67796744 9 5867 13064 intergenic 105.98 1 1,1,1 1 0,1,1 35.1612408385887 1.68876301285977 0 131.914266234873 3.05740967544397 7.448 174.497017214931 3.51079301898347 7.514 0 1 human,macaque, antisense retained_intron A549@31.1101,AG04450@7.47147,BJ@16.004,GM12878@0.0019715,H1HESC@0.157822,HELAS3@13.7781,HEPG2@4.67417,HMEC@2.56182,HSMM@16.7802,HUVEC@0.311353,K562@0.059617,MCF7@1.37471,NHEK@0.0479,NHLF@11.318,SKNSHRA@3.14874, 0 0 0 0 ENSG00000006534.11 ENST00000531459.1 chr11:67777813-67795624 9 1582 16213 intergenic 65.53 0 0,1,1 1 0,1,1 117.240202275601 2.67643249244433 0 294.717446270544 4.33386788379695 7.448 376.415297092288 4.93819774255227 7.514 0 0 cat,chimp,cow,dog,elephant,guinea_pig,horse,human,macaque,marmoset,mouse,opossum,orangutan,panda,pig,rabbit,rat, antisense antisense A549@31.1101,AG04450@7.47147,BJ@16.004,GM12878@0.0019715,H1HESC@0.157822,HELAS3@13.7781,HEPG2@4.67417,HMEC@2.56182,HSMM@16.7802,HUVEC@0.311353,K562@0.059617,MCF7@1.37471,NHEK@0.0479,NHLF@11.318,SKNSHRA@3.14874, 0 0 0 0 ENSG00000006534.11 ENST00000434449.1 chr11:67777822-67796743 10 2773 16130 intergenic 105.98 1 1,1,1 1 0,1,1 74.3927154706094 1.36776193428394 0 277.591777857916 2.69510229386237 7.448 367.13090515687 3.1307501549907 7.514 0 1 chimp,human,macaque,orangutan, antisense antisense A549@31.1101,AG04450@7.47147,BJ@16.004,GM12878@0.0019715,H1HESC@0.157822,HELAS3@13.7781,HEPG2@4.67417,HMEC@2.56182,HSMM@16.7802,HUVEC@0.311353,K562@0.059617,MCF7@1.37471,NHEK@0.0479,NHLF@11.318,SKNSHRA@3.14874, 0 0 0 0 ENSG00000006534.11 ENST00000530046.1 chr11:67777837-67796161 9 2067 16241 intergenic 123.18 0 1,1,1 1 0,1,1 99.8021286889211 1.35841389077027 0 293.486695694243 3.85321100917431 7.448 385.205128205128 4.19604704143833 7.514 0 0 cat,chimp,cow,dog,elephant,guinea_pig,horse,human,macaque,marmoset,opossum,orangutan,panda,pig, antisense antisense A549@31.1101,AG04450@7.47147,BJ@16.004,GM12878@0.0019715,H1HESC@0.157822,HELAS3@13.7781,HEPG2@4.67417,HMEC@2.56182,HSMM@16.7802,HUVEC@0.311353,K562@0.059617,MCF7@1.37471,NHEK@0.0479,NHLF@11.318,SKNSHRA@3.14874, 0 0 0 0 ENSG00000006534.11 ENST00000525518.1 chr11:67782438-67788991 7 701 5840 intergenic 35.92 0 0,1,0 0 0,1,1 68.9971469329529 1.30325342465753 12.896 217.105563480742 2.94520547945206 4.704 236.256776034237 3.64383561643836 4.72 0 0 cat,chimp,cow,dog,elephant,guinea_pig,horse,human,macaque,marmoset,mouse,opossum,orangutan,panda,pig,rabbit,rat, antisense antisense A549@31.1101,AG04450@7.47147,BJ@16.004,GM12878@0.0019715,H1HESC@0.157822,HELAS3@13.7781,HEPG2@4.67417,HMEC@2.56182,HSMM@16.7802,HUVEC@0.311353,K562@0.059617,MCF7@1.37471,NHEK@0.0479,NHLF@11.318,SKNSHRA@3.14874, 0 0 0 0 ENSG00000006534.11 ENST00000527179.1 chr11:67782764-67795577 8 1220 11579 intergenic 65.53 0 0,0,1 0 0,1,1 55.0114754098361 12.8557733828483 12.896 291.631147540984 12.9271094222299 5.013 395.947540983607 13.5451247948873 5.094 0 0 cat,chimp,cow,dog,elephant,guinea_pig,horse,human,macaque,marmoset,mouse,opossum,orangutan,panda,pig,rat, antisense antisense A549@31.1101,AG04450@7.47147,BJ@16.004,GM12878@0.0019715,H1HESC@0.157822,HELAS3@13.7781,HEPG2@4.67417,HMEC@2.56182,HSMM@16.7802,HUVEC@0.311353,K562@0.059617,MCF7@1.37471,NHEK@0.0479,NHLF@11.318,SKNSHRA@3.14874, 0 0 0 0 ENSG00000006534.11 ENST00000526609.1 chr11:67786051-67789320 5 811 2450 intergenic 26.48 0 0,1,1 1 0,1,1 224.028360049322 3.1065306122449 0 289.617755856967 4.6134693877551 0 305.319358816276 5.61918367346939 3.617 0 0 cat,chimp,cow,dog,elephant,guinea_pig,horse,human,macaque,marmoset,mouse,opossum,orangutan,panda,pig,rabbit,rat, antisense antisense A549@31.1101,AG04450@7.47147,BJ@16.004,GM12878@0.0019715,H1HESC@0.157822,HELAS3@13.7781,HEPG2@4.67417,HMEC@2.56182,HSMM@16.7802,HUVEC@0.311353,K562@0.059617,MCF7@1.37471,NHEK@0.0479,NHLF@11.318,SKNSHRA@3.14874, 0 0 0 0 ENSG00000006534.11 ENST00000527514.1 chr11:67789312-67792083 3 600 2167 intergenic 29.55 1 0,0,1 0 0,1,1 41.0066666666667 0.717581910475312 152.24 97.2466666666667 1.87494231656668 123.839 202.173333333333 2.11675126903553 121.915 0 1 chimp,human,macaque,orangutan, antisense antisense A549@31.1101,AG04450@7.47147,BJ@16.004,GM12878@0.0019715,H1HESC@0.157822,HELAS3@13.7781,HEPG2@4.67417,HMEC@2.56182,HSMM@16.7802,HUVEC@0.311353,K562@0.059617,MCF7@1.37471,NHEK@0.0479,NHLF@11.318,SKNSHRA@3.14874, 0 0 0 0 ENSG00000255306.1 ENST00000532296.1 chr11:67792277-67797928 4 735 4910 intergenic 15.10 1 1,1,1 0 0,0,0 0 0 0 10 14.3057026476578 35.881 9.71428571428571 18.3824847250509 38.062 1 1 chimp,human,macaque,marmoset,orangutan, antisense antisense A549@0.139493,AG04450@0.0523455,BJ@0.104556,GM12878@0.158388,H1HESC@0.442984,HELAS3@0.602306,HEPG2@0.426473,HMEC@0.027704,HSMM@0.02626,HUVEC@0.0358115,K562@0.177229,MCF7@0.435291,NHEK@0.00614633,NHLF@0.005222,SKNSHRA@0.473507, 0 0 0 0 ENSG00000255031.1 ENST00000526897.1 chr11:67819560-67821161 3 788 809 exonic 2.40 1 1,1,1 0 0,0,0 0 36.0321384425216 0 2.87309644670051 36.778739184178 4.96 37.5571065989848 41.3708281829419 5.18 0 0 chimp,horse,human,macaque,marmoset,orangutan, processed_transcript processed_transcript A549@7.13846,AG04450@4.94907,BJ@9.22801,GM12878@10.3988,H1HESC@0.251484,HELAS3@6.62478,HEPG2@10.6326,HMEC@0.119939,HSMM@1.15619,HUVEC@7.04304,K562@10.9333,MCF7@0.54647,NHEK@2.95739,NHLF@0.50316,SKNSHRA@0.015967, 0 0 0 0 ENSG00000255031.1 ENST00000534517.1 chr11:67820290-67821229 2 662 275 exonic 2.06 1 1,1,1 0 0,0,0 64.166163141994 0 0 53.987915407855 0 0 60.5936555891239 0 0 0 0 chimp,dog,elephant,guinea_pig,horse,human,macaque,marmoset,orangutan,panda, processed_transcript processed_transcript A549@7.13846,AG04450@4.94907,BJ@9.22801,GM12878@10.3988,H1HESC@0.251484,HELAS3@6.62478,HEPG2@10.6326,HMEC@0.119939,HSMM@1.15619,HUVEC@7.04304,K562@10.9333,MCF7@0.54647,NHEK@2.95739,NHLF@0.50316,SKNSHRA@0.015967, 0 0 0 0 ENSG00000255236.1 ENST00000527519.1 chr11:67889520-67897979 2 483 7974 intergenic 14.28 0 0,1,1 0 0,0,0 15.0310559006211 1.22886882367695 17.225 31.8260869565217 3.6117381489842 118.286 31.1821946169772 3.66077251065964 83.678 0 1 human,macaque, antisense antisense A549@0.0892695,AG04450@0.0090885,BJ@0.0050765,GM12878@0.043315,H1HESC@0.0809125,HELAS3@0.470529,HEPG2@0.084512,HMEC@0,HSMM@0,HUVEC@0.005401,K562@0.010128,MCF7@0.159798,NHEK@0,NHLF@0,SKNSHRA@0.286048, 0 0 0 0 ENSG00000255236.1 ENST00000530842.1 chr11:67897265-67897911 2 549 95 intergenic 3.48 0 0,0,1 0 0,0,0 0 0 0 0 0 0 0 0 0 1 1 chimp,human,macaque,marmoset,orangutan, antisense antisense A549@0.0892695,AG04450@0.0090885,BJ@0.0050765,GM12878@0.043315,H1HESC@0.0809125,HELAS3@0.470529,HEPG2@0.084512,HMEC@0,HSMM@0,HUVEC@0.005401,K562@0.010128,MCF7@0.159798,NHEK@0,NHLF@0,SKNSHRA@0.286048, 0 0 0 0 ENSG00000250508.1 ENST00000512200.1 chr11:68638132-68642010 2 3250 626 intergenic 0.74 0 1,1,1 0 0,0,0 0 0 0 0 0 0 0 0 0 0 0 NA lincRNA lincRNA A549@0.020288,AG04450@0.0601355,BJ@0.107678,GM12878@0,H1HESC@0.263894,HELAS3@0.0128355,HEPG2@0.113558,HMEC@0,HSMM@0.0080025,HUVEC@0.764143,K562@0.156855,MCF7@0.0012645,NHEK@0.00722133,NHLF@0.06454,SKNSHRA@0, 0 0 0 0 ENSG00000255741.1 ENST00000542410.1 chr11:68708971-68710320 2 567 780 intergenic 3.48 0 0,1,0 0 0,0,0 0 0 11.04 0 0 12.688 0 0 12.84 0 0 chimp,dog,elephant,horse,human,macaque,marmoset,orangutan, antisense antisense A549@0,AG04450@0.015473,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000256508.1 ENST00000538407.1 chr11:68779899-68785913 6 1482 4522 intronic 0.95 0 0,0,1 0 0,0,0 23.8495276653171 27.2691287041132 0 35.9993252361673 24.9340999557718 1.785 43.8225371120108 26.6758071649713 1.855 0 0 chimp,horse,human,marmoset,orangutan,panda, lincRNA lincRNA A549@0,AG04450@0.233507,BJ@0.371999,GM12878@0,H1HESC@0.162327,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0.127918,HUVEC@0,K562@0,MCF7@0.0041455,NHEK@0,NHLF@0.355299,SKNSHRA@0, 0 0 0 0 ENSG00000249137.2 ENST00000501574.3 chr11:68857484-68858431 2 912 33 exonic -5.99 0 0,0,1 0 0,0,0 0 0 0 0 0 0 0 0 0 0 1 chimp,human,orangutan, antisense antisense A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0.0049645, 0 0 0 0 ENSG00000255980.1 ENST00000545202.1 chr11:69240458-69244389 2 2374 1555 intergenic 10.05 0 0,1,0 0 0,0,0 0 0 0 0 0 0 3.27759056444819 4.63022508038585 0 0 1 chimp,human,macaque,orangutan, lincRNA lincRNA A549@0.006477,AG04450@0,BJ@0.007121,GM12878@0.0033935,H1HESC@0.0121605,HELAS3@0.001902,HEPG2@0,HMEC@0,HSMM@0.001919,HUVEC@0,K562@0,MCF7@0.005077,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000255606.1 ENST00000544004.1 chr11:69253133-69259511 2 579 5797 intergenic 4.01 0 1,1,1 0 0,0,0 0 20.4585130239779 0 19.5060449050086 14.6648266344661 4.845 26.8065630397237 24.366568914956 18.917 0 0 chimp,cow,dog,elephant,horse,human,macaque,marmoset,orangutan,panda,pig, lincRNA lincRNA A549@0.029024,AG04450@0,BJ@0.096345,GM12878@0,H1HESC@0.005115,HELAS3@0.021553,HEPG2@0,HMEC@0.077523,HSMM@0.225185,HUVEC@0,K562@0.038512,MCF7@0.149631,NHEK@0,NHLF@0.0033585,SKNSHRA@0.0173825, 0 0 0 0 ENSG00000255774.1 ENST00000542064.1 chr11:69291901-69294708 2 724 2081 intergenic 3.33 0 0,0,0 1 0,0,0 0 0 0 0 0 7.486 0 0 7.575 0 1 chimp,human,macaque,orangutan, lincRNA lincRNA A549@2.95746,AG04450@0,BJ@0,GM12878@0,H1HESC@0.028654,HELAS3@0.0344965,HEPG2@0.0346075,HMEC@0,HSMM@0.017005,HUVEC@0,K562@0,MCF7@13.8053,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000255191.1 ENST00000534086.1 chr11:69831982-69861921 2 430 29507 intergenic 0 0 0,1,0 0 0,0,0 39.3674418604651 4.20500220286712 34.178 52.2418604651163 7.1458636933609 16.214 37.2813953488372 6.98583386992917 14.25 0 0 chimp,cow,dog,elephant,guinea_pig,human,macaque,marmoset,orangutan,panda,pig,rabbit, lincRNA lincRNA A549@0,AG04450@0.413524,BJ@0,GM12878@0,H1HESC@0.022069,HELAS3@0,HEPG2@0,HMEC@0.48195,HSMM@0,HUVEC@0,K562@0.005375,MCF7@0,NHEK@0,NHLF@0.027268,SKNSHRA@0, 0 0 0 0 ENSG00000254605.1 ENST00000528507.1 chr11:69860964-69867165 3 652 5545 intergenic -5.28 0 1,1,1 0 0,0,0 0 0 8.51 0 0 26.105 0 0.593327321911632 41.641 1 1 chimp,human,macaque,marmoset,orangutan, lincRNA lincRNA A549@0,AG04450@0.0188385,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0.025005,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0.075424,NHLF@0.002979,SKNSHRA@0, 0 0 0 0 ENSG00000254605.1 ENST00000533170.1 chr11:69860973-69862556 2 367 1214 intergenic -5.28 0 0,0,1 0 0,0,0 0 0 0 0 0 0 0 0 0 1 1 chimp,human,macaque,marmoset,orangutan, lincRNA lincRNA A549@0,AG04450@0.0188385,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0.025005,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0.075424,NHLF@0.002979,SKNSHRA@0, 0 0 0 0 ENSG00000248844.2 ENST00000528316.1 chr11:69902336-69910030 2 546 7146 intergenic 1.85 1 0,1,0 0 0,0,0 18.5347985347985 0 0 0 0 0 0 0.51007556675063 0 1 1 chimp,human,macaque,marmoset,orangutan, antisense lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000248844.2 ENST00000511013.2 chr11:69902336-69911477 2 1753 7386 intergenic 2.18 1 0,0,0 0 0,0,0 0 1.37015976171135 0 0 0 0 0 0.493501218521527 0 0 0 chimp,cow,human,macaque,orangutan,pig, antisense lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000254417.1 ENST00000531347.1 chr11:69918540-69921539 2 1002 1995 intergenic 4.47 1 0,1,0 0 0,0,0 0 0 0 2.4750499001996 5.99448621553885 2.976 2.58483033932136 6.14085213032581 3.108 1 1 chimp,human,macaque,marmoset,orangutan, antisense antisense A549@0,AG04450@0.0022325,BJ@0,GM12878@0,H1HESC@0.016854,HELAS3@0,HEPG2@0,HMEC@0.02447,HSMM@0,HUVEC@0.005386,K562@0,MCF7@0,NHEK@0.00256333,NHLF@0.003887,SKNSHRA@0, 0 0 0 0 ENSG00000254417.1 ENST00000533327.1 chr11:69918846-69921454 3 495 2109 intergenic 4.47 0 0,0,0 0 0,0,0 0 0 0 0 5.67045993361783 5.456 0 5.80891417733523 5.698 1 1 chimp,human,macaque,marmoset,orangutan, antisense antisense A549@0,AG04450@0.0022325,BJ@0,GM12878@0,H1HESC@0.016854,HELAS3@0,HEPG2@0,HMEC@0.02447,HSMM@0,HUVEC@0.005386,K562@0,MCF7@0,NHEK@0.00256333,NHLF@0.003887,SKNSHRA@0, 0 0 0 0 ENSG00000255143.1 ENST00000530525.1 chr11:69975403-69995729 2 495 19829 intronic -15.22 0 0,1,0 0 0,0,0 0 3.4749104846437 0 0 5.95637702355136 0 0 6.46356346764839 0 0 1 chimp,human,macaque,orangutan, processed_transcript processed_transcript A549@0,AG04450@0.016996,BJ@0,GM12878@0,H1HESC@0.053593,HELAS3@0,HEPG2@0,HMEC@0.040703,HSMM@0,HUVEC@0,K562@0.0017325,MCF7@0,NHEK@0.184519,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000254902.1 ENST00000524987.1 chr11:70033894-70034615 2 644 75 exonic -5.50 0 0,1,1 0 0,0,0 78.6521739130435 0 29.274 118.821428571429 54.6666666666667 92.436 141.113354037267 15.7333333333333 123.943 0 0 cat,chimp,cow,dog,elephant,guinea_pig,horse,human,macaque,marmoset,mouse,orangutan,panda,pig, antisense antisense A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0.00407833,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000254721.1 ENST00000526174.1 chr11:70052397-70053496 2 974 123 exonic 6.49 0 1,1,1 0 0,0,0 0 0 0 11.4363449691992 0 0 11.4496919917864 0 0 0 0 chimp,elephant,horse,human,macaque,marmoset,orangutan,panda, antisense antisense A549@0.0068605,AG04450@0.0032755,BJ@0,GM12878@0.0036935,H1HESC@0.002885,HELAS3@0.018061,HEPG2@0.006796,HMEC@0,HSMM@0,HUVEC@0,K562@0.0032295,MCF7@0.0350475,NHEK@0.00270967,NHLF@0,SKNSHRA@0.003741, 0 0 0 0 ENSG00000254721.1 ENST00000527232.1 chr11:70052677-70053493 2 717 97 exonic 0.56 0 1,1,1 0 0,0,0 0 0 0 0 0 0 0 0 0 0 0 chimp,horse,human,macaque,marmoset,orangutan,panda, antisense antisense A549@0.0068605,AG04450@0.0032755,BJ@0,GM12878@0.0036935,H1HESC@0.002885,HELAS3@0.018061,HEPG2@0.006796,HMEC@0,HSMM@0,HUVEC@0,K562@0.0032295,MCF7@0.0350475,NHEK@0.00270967,NHLF@0,SKNSHRA@0.003741, 0 0 0 0 ENSG00000254604.1 ENST00000528607.1 chr11:70128473-70209474 2 537 80462 intronic -2.66 0 0,0,0 0 0,0,0 0 9.65788819567 7.36 0 9.95216375431881 0 3.76722532588454 16.0461211503567 0 0 0 chimp,guinea_pig,human,macaque,marmoset,orangutan, antisense antisense A549@0.0194005,AG04450@0.0140205,BJ@0.0044895,GM12878@0,H1HESC@0,HELAS3@0.008384,HEPG2@0.032353,HMEC@0.015193,HSMM@0.007635,HUVEC@0.014863,K562@0.004308,MCF7@0.028276,NHEK@0,NHLF@0.0035305,SKNSHRA@0.027252, 0 0 0 0 ENSG00000254484.1 ENST00000531426.1 chr11:70166034-70167521 2 420 1065 intronic -0.76 0 0,0,0 0 0,0,0 0 0 0 0 0 0 0 0 0 1 1 chimp,human,macaque,marmoset,orangutan, sense_intronic sense_intronic A549@0.0456755,AG04450@0.007867,BJ@0.0662775,GM12878@0.0044405,H1HESC@0.028882,HELAS3@0.0192495,HEPG2@0.008816,HMEC@0,HSMM@0.125529,HUVEC@0.125885,K562@0.0264515,MCF7@0.562128,NHEK@0.00865567,NHLF@0,SKNSHRA@0.12425, 0 0 0 0 ENSG00000255539.1 ENST00000526017.1 chr11:70170977-70173315 2 365 1971 exonic -3.21 0 0,1,0 0 0,0,0 113.178082191781 45.8756976154236 0 61.1561643835616 41.4205986808727 0 164.367123287671 80.8934550989345 0 0 0 cat,chimp,cow,dog,elephant,guinea_pig,horse,human,macaque,marmoset,mouse,opossum,orangutan,panda,pig,platypus,rabbit,rat, antisense antisense A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000254495.1 ENST00000324630.5 chr11:70204304-70204783 2 392 85 intronic 0 0 0,0,0 0 0,0,0 0 0 0 0 0 0 0 0 0 1 1 chimp,human,macaque,marmoset,orangutan, antisense antisense A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0.005075,SKNSHRA@0.0130585, 2 44 0 0 ENSG00000246889.2 ENST00000530690.1 chr11:70218352-70244468 2 552 25562 exonic 5.76 0 0,1,1 1 0,0,0 112.619565217391 14.7425475314921 0 135.942028985507 15.7044049761365 24.504 201.597826086957 25.6499491432595 46.214 0 0 dog,horse,human,orangutan,pig, antisense antisense A549@0.195463,AG04450@0.0772095,BJ@0.063699,GM12878@0.0736125,H1HESC@0.109618,HELAS3@0.401795,HEPG2@0.212974,HMEC@0.020691,HSMM@0.0458455,HUVEC@0.0701165,K562@0.150018,MCF7@0.259867,NHEK@0.0240753,NHLF@0.051646,SKNSHRA@0.227971, 0 0 0 0 ENSG00000246889.2 ENST00000500185.2 chr11:70219516-70244594 2 2600 22476 exonic 5.76 0 0,1,0 1 0,0,0 0 16.0920092543157 0 8.48423076923077 16.1453105534793 24.504 24.8530769230769 25.4389126179035 45.119 1 1 chimp,human,macaque,marmoset,orangutan, antisense antisense A549@0.195463,AG04450@0.0772095,BJ@0.063699,GM12878@0.0736125,H1HESC@0.109618,HELAS3@0.401795,HEPG2@0.212974,HMEC@0.020691,HSMM@0.0458455,HUVEC@0.0701165,K562@0.150018,MCF7@0.259867,NHEK@0.0240753,NHLF@0.051646,SKNSHRA@0.227971, 0 0 0 0 ENSG00000246889.2 ENST00000524619.1 chr11:70227197-70244408 2 390 16819 intronic 1.93 1 1,1,1 1 0,0,0 0 16.3856352934182 0 0 15.8290029133718 24.504 0 26.0887686544979 46.214 0 1 chimp,human,macaque,orangutan, antisense antisense A549@0.195463,AG04450@0.0772095,BJ@0.063699,GM12878@0.0736125,H1HESC@0.109618,HELAS3@0.401795,HEPG2@0.212974,HMEC@0.020691,HSMM@0.0458455,HUVEC@0.0701165,K562@0.150018,MCF7@0.259867,NHEK@0.0240753,NHLF@0.051646,SKNSHRA@0.227971, 0 0 0 0 ENSG00000227726.1 ENST00000445532.1 chr11:70323382-70323697 2 204 109 intronic 0 0 0,0,0 0 0,0,0 0 0 0 0 0 3.965 0 0 14.873 0 0 chimp,human,macaque,marmoset,orangutan, sense_intronic sense_intronic A549@0,AG04450@0.006798,BJ@0,GM12878@0,H1HESC@0.0436,HELAS3@0,HEPG2@0.0843795,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000224119.1 ENST00000445654.1 chr11:70412492-70417428 3 418 4514 intronic -1.88 0 0,0,1 0 0,0,0 0 0 0 0 2.79574656623837 0 0 3.73593265396544 0 0 0 chimp,horse,human,macaque,marmoset,orangutan, sense_intronic sense_intronic A549@0.0567795,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0.039749,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0.028076, 0 0 0 0 ENSG00000226627.1 ENST00000429561.1 chr11:70477199-70481595 3 2249 2143 intronic 3.30 0 0,0,0 0 0,0,0 0 0 0 0 0 0 0 0 0 0 0 chimp,human,macaque,orangutan, antisense antisense A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0.0026395,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0.021813,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000236262.1 ENST00000429268.1 chr11:70492270-70493667 2 354 1041 intronic -5.22 0 0,0,1 0 0,0,0 0 0 0 0 0 2.151 0 0 8.262 0 0 chimp,human,macaque,marmoset,orangutan, antisense antisense A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0.01635,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000171671.6 ENST00000307548.2 chr11:70708895-70711220 3 1680 641 intronic 10.13 1 0,0,0 0 0,0,0 6.84226190476191 0 0 0 0 0 0 0 0 0 0 chimp,human,macaque,marmoset,orangutan, antisense antisense A549@0,AG04450@0,BJ@0.001923,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0.0048865,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000254682.1 ENST00000529369.1 chr11:71159720-71163203 2 678 2803 intronic 4.59 1 1,1,1 1 0,0,0 0 0 0 0 0 2.208 0 79.9382804138423 3.399 0 1 chimp,human,macaque,orangutan, antisense antisense A549@5.47822,AG04450@0.888502,BJ@1.90187,GM12878@21.8528,H1HESC@25.9959,HELAS3@4.56588,HEPG2@9.66117,HMEC@4.6499,HSMM@4.21921,HUVEC@9.20697,K562@41.1703,MCF7@13.9909,NHEK@1.74119,NHLF@3.9439,SKNSHRA@4.98657, 0 0 0 0 ENSG00000254504.1 ENST00000527566.1 chr11:71383721-71421627 2 420 37484 intergenic -0.24 0 0,0,0 0 0,0,0 0 0 0 0 2.67324725216092 0 0 6.7087557357806 0 0 0 chimp,cow,elephant,horse,human,macaque,marmoset,orangutan,panda, processed_transcript processed_transcript A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000254972.1 ENST00000532530.1 chr11:71412314-71416450 3 344 3788 intergenic -0.49 1 0,1,0 0 0,0,0 0 0 0 53.1976744186046 6.6974656810982 0 24.093023255814 11.1644667370644 0 0 0 cat,chimp,cow,dog,human,macaque,marmoset,orangutan, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0.020265,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0.0066915,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000248671.2 ENST00000511954.1 chr11:71505409-71524891 4 1570 17906 intronic 8.37 1 0,1,1 0 0,0,0 0 0 0 48.359872611465 3.8635652853792 0 135.928025477707 31.1061655311069 0 0 0 cat,chimp,cow,dog,guinea_pig,horse,human,macaque,marmoset,orangutan,pig,rabbit, processed_transcript processed_transcript A549@0.0893895,AG04450@0.0268015,BJ@0.0673735,GM12878@0.112957,H1HESC@0.110034,HELAS3@0.0884575,HEPG2@0.154133,HMEC@0.015513,HSMM@0.0020415,HUVEC@0.0100545,K562@0.001316,MCF7@0.040946,NHEK@0.000920333,NHLF@0.0052155,SKNSHRA@0.241299, 0 0 0 0 ENSG00000248671.2 ENST00000524714.1 chr11:71507008-71524492 4 443 17035 exonic 6.64 0 0,1,0 0 0,0,0 0 0 0 96.2121896162528 4.06110948048136 0 164.406320541761 32.4632227766363 0 0 0 cat,chimp,cow,dog,elephant,guinea_pig,horse,human,macaque,marmoset,mouse,orangutan,pig,rabbit, processed_transcript processed_transcript A549@0.0893895,AG04450@0.0268015,BJ@0.0673735,GM12878@0.112957,H1HESC@0.110034,HELAS3@0.0884575,HEPG2@0.154133,HMEC@0.015513,HSMM@0.0020415,HUVEC@0.0100545,K562@0.001316,MCF7@0.040946,NHEK@0.000920333,NHLF@0.0052155,SKNSHRA@0.241299, 0 0 0 0 ENSG00000248671.2 ENST00000508969.2 chr11:71521347-71524905 2 2163 1393 intergenic 8.37 1 0,1,1 0 0,0,0 0 0 0 0 0 0 54.3962089690245 8.99497487437186 0 0 1 chimp,human,orangutan, processed_transcript processed_transcript A549@0.0893895,AG04450@0.0268015,BJ@0.0673735,GM12878@0.112957,H1HESC@0.110034,HELAS3@0.0884575,HEPG2@0.154133,HMEC@0.015513,HSMM@0.0020415,HUVEC@0.0100545,K562@0.001316,MCF7@0.040946,NHEK@0.000920333,NHLF@0.0052155,SKNSHRA@0.241299, 0 0 0 0 ENSG00000251143.1 ENST00000502284.1 chr11:71725337-71731956 4 4229 2384 exonic 22.89 0 0,1,1 0 0,0,0 145.660439820288 39.0209731543624 354.657 189.917238117758 57.5633389261745 315.599 157.186332466304 56.6665268456376 280.849 0 0 chimp,cow,elephant,human,macaque,marmoset,orangutan,pig, antisense antisense A549@0.195709,AG04450@0.0287655,BJ@0.0290845,GM12878@0.170752,H1HESC@0.01196,HELAS3@0.146995,HEPG2@0.177591,HMEC@0.013542,HSMM@0.083979,HUVEC@0.160453,K562@0.0369165,MCF7@0.450107,NHEK@0.0313633,NHLF@0.0270085,SKNSHRA@0.223807, 0 0 0 0 ENSG00000204971.3 ENST00000378140.3 chr11:71874366-71920285 3 474 45441 encompassing -1.71 0 0,0,0 0 0,0,0 0 3.11762505226558 72.352 0 8.81591514271253 76.874 0 19.9431350542462 107.146 1 1 chimp,human,macaque,marmoset,orangutan, antisense antisense A549@0,AG04450@0,BJ@0,GM12878@0.005567,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0.0493745, 0 0 0 0 ENSG00000255843.1 ENST00000546065.1 chr11:72013183-72014009 2 576 248 exonic -1.32 0 0,1,1 0 0,0,0 41.5677083333333 2.79838709677419 90.45 65.1666666666667 0 78.179 81.7916666666667 2.41935483870968 92.609 0 0 cat,chimp,cow,horse,human,macaque,marmoset,orangutan,panda, antisense antisense A549@0,AG04450@0,BJ@0,GM12878@0.0069755,H1HESC@0.0085625,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0.033367,MCF7@0.003557,NHEK@0,NHLF@0,SKNSHRA@0.113957, 0 0 0 0 ENSG00000256739.1 ENST00000544195.1 chr11:72062391-72064254 2 558 1303 intronic -3.23 0 0,1,0 0 0,0,0 0 17.1297006907137 11.96 25.6774193548387 26.464313123561 12.719 27.3440860215054 31.1005372217959 20.386 0 0 chimp,cow,dog,guinea_pig,human,macaque,marmoset,orangutan,rabbit,rat, antisense antisense A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0.064637, 0 0 0 0 ENSG00000255672.1 ENST00000537727.1 chr11:72065560-72074599 3 547 8488 intronic 4.12 0 0,0,0 0 0,0,0 0 63.3846606974552 0 0 49.0497172478794 0 0 49.36321866164 0 0 0 chimp,elephant,human,macaque,marmoset,orangutan,panda, antisense antisense A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@1.15915, 0 0 0 0 ENSG00000256403.1 ENST00000544959.1 chr11:72121760-72123123 2 490 871 intronic 2.41 0 0,0,0 0 0,0,0 385.485714285714 44.3444316877153 5.28 331.224489795918 24.3547646383467 0 303.032653061224 34.7910447761194 0 0 0 cat,chimp,cow,dog,elephant,guinea_pig,horse,human,macaque,marmoset,mouse,orangutan,panda,rabbit,rat, antisense antisense A549@0,AG04450@0,BJ@0,GM12878@0.0053975,H1HESC@0,HELAS3@0.0339355,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0.116829, 0 0 0 0 ENSG00000227467.3 ENST00000450804.3 chr11:72281704-72284273 2 2448 119 intergenic 0.01 1 0,0,0 0 0,0,0 0 0 0 0 0 0 0 0 4.131 0 0 human, lincRNA processed_transcript A549@0,AG04450@0.0026325,BJ@0,GM12878@0.0021675,H1HESC@0,HELAS3@5.83392,HEPG2@1.65668,HMEC@0.010028,HSMM@0.491225,HUVEC@0.0164455,K562@0,MCF7@0,NHEK@0.0903187,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000256633.1 ENST00000545254.1 chr11:72295616-72299023 2 662 2743 exonic 13.98 0 0,1,0 0 0,0,0 129.081570996979 27.4283631060882 46.608 173.865558912387 44.9022967553773 73.816 184.129909365559 52.7437112650383 74.086 0 0 cat,chimp,cow,elephant,horse,human,macaque,marmoset,mouse,orangutan,pig,rabbit,rat, antisense antisense A549@0,AG04450@0.06897,BJ@0.0663185,GM12878@0.0079985,H1HESC@0.453434,HELAS3@0.214243,HEPG2@0.078053,HMEC@0.061666,HSMM@0.172412,HUVEC@0.010527,K562@0,MCF7@0,NHEK@0.0680877,NHLF@0.005812,SKNSHRA@0.0081015, 0 0 0 0 ENSG00000255808.1 ENST00000540912.1 chr11:72354281-72370451 4 558 15606 exonic -3.98 0 0,1,1 0 0,0,0 27.2777777777778 3.16314238113546 37.797 59.6917562724014 16.119313084711 196.043 45.2258064516129 16.0796488530053 170.581 0 0 horse,human,marmoset,orangutan,panda, antisense antisense A549@0.0038625,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0.02291,HEPG2@0.038829,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000256007.1 ENST00000542022.1 chr11:72396120-72404853 2 386 8345 exonic 0 0 1,1,1 0 0,0,0 0 41.2695026962253 0 121.305699481865 59.0587177950869 14.942 128.080310880829 62.3686039544638 17.219 0 0 cat,cow,dog,elephant,guinea_pig,horse,human,macaque,marmoset,mouse,orangutan,panda,pig,rabbit,rat, antisense antisense A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0.0125055,SKNSHRA@0, 0 0 0 0 ENSG00000245148.2 ENST00000500163.2 chr11:72411519-72416652 2 1822 3309 exonic 4.24 0 0,0,0 0 0,0,0 49.3847420417124 30.6083408884859 91.525 86.1520307354556 98.0924750679963 68.898 64.205268935236 87.0374735569658 54.45 0 0 chimp,elephant,human,macaque,marmoset,orangutan,rat, antisense antisense A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0.004577,HEPG2@0.0016065,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0.0615575,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000255709.1 ENST00000538111.1 chr11:72466374-72477338 3 365 10595 exonic -5.01 0 0,1,1 0 0,0,0 0 25.5021236432279 134.75 0 35.0477583765927 159.963 0 36.6442661632846 133.138 1 1 chimp,human,macaque,marmoset,orangutan, antisense antisense A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0.016151,HELAS3@0,HEPG2@0.0074125,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0.14302,NHEK@0,NHLF@0,SKNSHRA@0.036391, 0 0 0 0 ENSG00000256568.1 ENST00000541254.1 chr11:72887739-72892741 2 616 4384 intergenic 5.02 0 0,0,1 0 0,0,0 6.59577922077922 0 26.589 0 10.3410127737226 25.631 0 10.7369981751825 25.984 0 1 chimp,human,macaque, lincRNA lincRNA A549@0.0070245,AG04450@0.0076215,BJ@0.0117475,GM12878@2.10057,H1HESC@0,HELAS3@0,HEPG2@0.017457,HMEC@0,HSMM@0.130567,HUVEC@0,K562@0,MCF7@0,NHEK@0.004263,NHLF@0.012489,SKNSHRA@0.011014, 0 0 0 0 ENSG00000215841.3 ENST00000400985.3 chr11:72926043-72926958 2 260 653 intergenic -5.04 0 0,0,1 0 0,0,0 19.2923076923077 0 0 0 17.4885145482389 0 0 17.9356814701378 0 0 0 chimp,human,macaque,marmoset,mouse,orangutan, antisense antisense A549@0.0316275,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0.0172485,HEPG2@0.022365,HMEC@0.046885,HSMM@0,HUVEC@0,K562@0,MCF7@0.085821,NHEK@0.0497007,NHLF@0,SKNSHRA@0, 1 96 0 0 ENSG00000257038.1 ENST00000546324.1 chr11:73018280-73020406 3 1692 430 exonic 59.54 1 0,1,1 1 0,0,0 240.690307328605 41.5953488372093 287.344 232.413711583924 72.5837209302326 255.965 193.156619385343 75.3953488372093 214.317 0 0 cat,chimp,cow,dog,elephant,human,macaque,marmoset,mouse,orangutan,pig,rat, antisense antisense A549@0.0774975,AG04450@0.195925,BJ@0.404169,GM12878@0.009864,H1HESC@0.031403,HELAS3@0.244879,HEPG2@0.260163,HMEC@0.189753,HSMM@0.711357,HUVEC@0.726121,K562@0.002898,MCF7@0.033129,NHEK@0.039694,NHLF@0.343712,SKNSHRA@0.150176, 0 0 0 0 ENSG00000256928.1 ENST00000544674.1 chr11:73106604-73107481 2 750 125 exonic 3.18 0 0,1,1 0 0,0,0 10.6 0 0 48.3333333333333 0 37.706 59.544 23.328 38.618 0 0 cat,dog,elephant,guinea_pig,horse,human,macaque,marmoset,mouse,orangutan,panda,rat, antisense antisense A549@0.017225,AG04450@0.03124,BJ@0.0043035,GM12878@0.045236,H1HESC@0.039519,HELAS3@0.067181,HEPG2@0.195877,HMEC@0,HSMM@0,HUVEC@0.100722,K562@0.006532,MCF7@0.0629875,NHEK@0.0486457,NHLF@0,SKNSHRA@0.214782, 0 0 0 0 ENSG00000256448.1 ENST00000542598.1 chr11:73116342-73121717 3 331 5040 exonic 4.80 0 0,0,1 0 0,0,0 185.477341389728 107.063888888889 198.167 113.70996978852 120.236111111111 112.445 116.187311178248 328.624404761905 125.419 0 0 cat,chimp,cow,dog,elephant,horse,human,macaque,marmoset,orangutan,panda,pig,rabbit, antisense antisense A549@0,AG04450@0,BJ@0.0072455,GM12878@0.014091,H1HESC@0,HELAS3@0.0149655,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0.008147,MCF7@0,NHEK@0.0135907,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000256448.1 ENST00000536855.1 chr11:73116342-73121727 2 283 5100 exonic 4.80 0 0,0,1 0 0,0,0 162.625441696113 108.87 198.167 101.219081272085 120.694509803922 112.445 103.144876325088 114.254117647059 125.419 0 0 cat,chimp,cow,dog,elephant,horse,human,macaque,marmoset,orangutan,panda,pig,rabbit, antisense antisense A549@0,AG04450@0,BJ@0.0072455,GM12878@0.014091,H1HESC@0,HELAS3@0.0149655,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0.008147,MCF7@0,NHEK@0.0135907,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000255928.1 ENST00000538624.1 chr11:73433394-73433739 2 208 135 intronic 0 0 0,0,0 0 0,0,0 0 0 0 0 0 0 0 0 0 1 1 chimp,human,macaque,marmoset,orangutan, antisense antisense A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000256034.1 ENST00000540547.1 chr11:73471608-73472115 2 426 79 exonic 7.93 0 0,1,1 0 0,0,0 261.347417840376 219.012658227848 115.54 301.828638497653 83.0379746835443 132.228 291.739436619718 60.3924050632911 111.695 0 0 cat,chimp,cow,dog,elephant,guinea_pig,human,macaque,marmoset,mouse,orangutan,panda,pig,rabbit,rat, antisense antisense A549@0.193423,AG04450@0.241306,BJ@0.651671,GM12878@0.0313265,H1HESC@0.198103,HELAS3@0.317554,HEPG2@0.0927325,HMEC@0.211421,HSMM@0.210676,HUVEC@0.703367,K562@0.0274385,MCF7@0,NHEK@0.0334137,NHLF@0.036066,SKNSHRA@0.352595, 0 0 0 0 ENSG00000247629.2 ENST00000421949.3 chr11:73594907-73597748 3 2173 664 intronic 0.42 0 0,0,0 0 0,0,0 0 0 38.584 0 0 61.606 0 0 61.433 0 1 chimp,human,macaque,orangutan, antisense lincRNA A549@0,AG04450@0,BJ@0.002224,GM12878@0.0136225,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0.002461,MCF7@0.001848,NHEK@0,NHLF@0,SKNSHRA@0.008345, 0 0 0 0 ENSG00000256360.1 ENST00000535936.1 chr11:73639578-73641417 2 381 1456 intergenic -8.57 0 0,0,0 0 0,0,0 0 0 9.614 0 0 20.131 0 2.33653846153846 16.906 0 1 chimp,human,orangutan, lincRNA lincRNA A549@0.128793,AG04450@0.12186,BJ@0.0830535,GM12878@0.141412,H1HESC@0.237444,HELAS3@0.164553,HEPG2@0.0509755,HMEC@0.053455,HSMM@0.179305,HUVEC@0.0614015,K562@0.096074,MCF7@0.100927,NHEK@0.145617,NHLF@0.0405865,SKNSHRA@0.163607, 0 0 0 0 ENSG00000255847.1 ENST00000537019.1 chr11:73674702-73681332 7 1405 5213 exonic 3.69 0 0,1,0 0 0,0,0 159.787900355872 13.3458661039708 0 207.712455516014 5.62823709955879 0 219.814234875445 6.18760790331863 0 0 0 cat,guinea_pig,horse,human,macaque,marmoset, antisense antisense A549@0.0050305,AG04450@0,BJ@0,GM12878@0.00166,H1HESC@0.293477,HELAS3@0.0150705,HEPG2@0.02032,HMEC@0,HSMM@0,HUVEC@0.011347,K562@0.0017395,MCF7@0.007144,NHEK@0.002805,NHLF@0,SKNSHRA@0.0051885, 0 0 0 0 ENSG00000255847.1 ENST00000540886.1 chr11:73675108-73676077 3 368 597 exonic -3.31 0 0,0,0 0 0,0,0 183.440217391304 0 3.707 215.304347826087 0 6.292 235.152173913043 0 4.41 0 0 cat,guinea_pig,horse,human,macaque,marmoset,opossum,orangutan,rabbit,rat, antisense antisense A549@0.0050305,AG04450@0,BJ@0,GM12878@0.00166,H1HESC@0.293477,HELAS3@0.0150705,HEPG2@0.02032,HMEC@0,HSMM@0,HUVEC@0.011347,K562@0.0017395,MCF7@0.007144,NHEK@0.002805,NHLF@0,SKNSHRA@0.0051885, 0 0 0 0 ENSG00000246211.2 ENST00000502071.2 chr11:74022407-74035750 7 2150 11181 exonic 4.03 1 0,1,1 0 0,0,0 8.76651162790698 3.10347911635811 0 11.7060465116279 9.9817547625436 2.367 17.6990697674419 11.7675520973079 3.939 1 1 chimp,human,macaque,marmoset,orangutan, lincRNA lincRNA A549@0.011277,AG04450@0,BJ@0.0033175,GM12878@0,H1HESC@0.0019235,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0.0072845,HUVEC@0.0861665,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000254631.1 ENST00000531906.1 chr11:74108594-74139610 3 488 30524 intronic -7.10 0 0,0,0 0 0,0,0 0 3.03256453937885 47.17 43.7786885245902 11.3230900275193 12.23 44.6516393442623 19.0727951775652 12.522 0 0 chimp,human,macaque,marmoset,orangutan,pig, processed_transcript processed_transcript A549@0.0099885,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0.080858,HUVEC@0.0340935,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000254631.1 ENST00000533008.1 chr11:74108698-74196787 4 340 87743 intronic 0 0 0,1,0 0 0,0,0 0 4.46118778705994 47.17 25.3294117647059 11.5945203605986 24.982 164.620588235294 16.6130517534162 25.664 0 0 chimp,horse,human,macaque,marmoset,orangutan, processed_transcript processed_transcript A549@0.0099885,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0.080858,HUVEC@0.0340935,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000255440.1 ENST00000524441.1 chr11:74120105-74127424 2 637 6680 intergenic -0.06 1 0,0,1 0 0,0,0 0 0 0 2.88854003139717 3.57604790419162 6.575 3.05180533751962 7.10808383233533 6.95 0 0 chimp,cow,elephant,human,macaque,marmoset,orangutan,pig,rabbit, lincRNA lincRNA A549@0.0199505,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0.006408,HSMM@0.107986,HUVEC@0.0061135,K562@0.0042655,MCF7@0.009439,NHEK@0.00606133,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000254928.1 ENST00000530510.1 chr11:74166393-74167870 2 607 868 exonic 0 0 0,0,0 0 0,0,0 0 0 0 4.33113673805601 0 0 4.40362438220758 0 1.944 0 0 cat,chimp,cow,dog,horse,human,macaque,marmoset,panda,pig, antisense antisense A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000255395.1 ENST00000530550.1 chr11:74810217-74851193 4 556 40414 intronic 1.27 0 0,1,0 0 0,0,0 0 1.53738803384966 0 0 7.30407779482358 10.154 0 7.24402434799822 12.299 1 1 chimp,human,macaque,marmoset,orangutan, processed_transcript processed_transcript A549@0.003876,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0.0141205,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000255136.1 ENST00000530792.1 chr11:74919099-74952218 4 491 32622 intergenic 3.13 0 0,1,0 0 0,0,0 138.769857433809 25.8249034393967 148.956 190.900203665988 38.6828520630249 540.21 151.704684317719 39.0071117650665 368.114 0 0 chimp,cow,elephant,human,macaque,marmoset,orangutan, processed_transcript processed_transcript A549@0.025084,AG04450@0,BJ@0,GM12878@0,H1HESC@0.0054095,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0.0046905,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0.0214445, 0 0 0 0 ENSG00000255136.1 ENST00000529491.1 chr11:74921894-74926530 2 536 4098 intergenic 3.19 0 0,0,1 0 0,0,0 0 52.0251342118106 0 13.3134328358209 72.5941922889214 0 20.9944029850746 73.5710102489019 4.131 0 0 cat,chimp,cow,dog,elephant,guinea_pig,horse,human,macaque,marmoset,orangutan,panda,rabbit, processed_transcript processed_transcript A549@0.025084,AG04450@0,BJ@0,GM12878@0,H1HESC@0.0054095,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0.0046905,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0.0214445, 0 0 0 0 ENSG00000254429.1 ENST00000529215.1 chr11:74971171-74972069 2 504 392 intergenic -2.23 0 0,1,0 0 0,0,0 87.3888888888889 0 0 145.843253968254 0 0 144.19246031746 0 0 0 0 chimp,cow,dog,horse,human,macaque,marmoset,orangutan,pig, antisense antisense A549@0,AG04450@0.012745,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000254963.1 ENST00000529304.1 chr11:74975333-74976214 2 214 665 exonic -7.19 0 0,1,1 0 0,0,0 0 0 0 0 10.9624060150376 5.157 0 11.2872180451128 5.264 0 0 cat,chimp,dog,elephant,guinea_pig,human,macaque,marmoset,orangutan,panda, antisense antisense A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0.0193245,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000254460.1 ENST00000533740.1 chr11:75217982-75219436 2 384 1068 intronic 0 0 0,0,1 0 0,0,0 0 0 0 0 8.5 10.774 0 9.76123595505618 10.894 0 0 chimp,cow,dog,horse,human,macaque,marmoset,orangutan, sense_intronic sense_intronic A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0.093368,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000254969.1 ENST00000534545.1 chr11:75282944-75283828 2 641 241 exonic -0.84 0 1,1,1 0 0,0,0 224.383775351014 485 0.337 227.332293291732 73.8547717842324 0 230.605304212168 61.0954356846473 0 0 0 cat,chimp,dog,guinea_pig,horse,human,macaque,marmoset,mouse,orangutan,panda,rabbit,rat, antisense antisense A549@0.01357,AG04450@0.274669,BJ@0.333984,GM12878@0,H1HESC@0.011523,HELAS3@0.003215,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0.010362,K562@0.003749,MCF7@0.008761,NHEK@0.0320067,NHLF@0.0030345,SKNSHRA@0.0595325, 0 0 0 0 ENSG00000254969.1 ENST00000531652.1 chr11:75283074-75283832 2 725 31 exonic 3.77 0 1,1,1 0 0,0,0 113.019310344828 0 0 118.696551724138 229.645161290323 0 107.684137931034 175.451612903226 0 0 0 cat,chimp,cow,dog,guinea_pig,horse,human,macaque,marmoset,mouse,orangutan,panda,pig,rabbit,rat, antisense antisense A549@0.01357,AG04450@0.274669,BJ@0.333984,GM12878@0,H1HESC@0.011523,HELAS3@0.003215,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0.010362,K562@0.003749,MCF7@0.008761,NHEK@0.0320067,NHLF@0.0030345,SKNSHRA@0.0595325, 0 0 0 0 ENSG00000254969.1 ENST00000525418.1 chr11:75283080-75283828 2 509 237 exonic -1.25 0 1,1,1 0 0,0,0 153.939096267191 0 0.337 161.94695481336 30.0379746835443 0 145.872298624754 22.9493670886076 0 0 0 cat,chimp,cow,dog,elephant,guinea_pig,horse,human,macaque,marmoset,mouse,orangutan,panda,pig,rabbit,rat, antisense antisense A549@0.01357,AG04450@0.274669,BJ@0.333984,GM12878@0,H1HESC@0.011523,HELAS3@0.003215,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0.010362,K562@0.003749,MCF7@0.008761,NHEK@0.0320067,NHLF@0.0030345,SKNSHRA@0.0595325, 0 0 0 0 ENSG00000255326.1 ENST00000527803.1 chr11:75294241-75305710 2 649 10818 intronic -0.25 0 0,1,1 1 0,0,0 33.6594761171032 18.7640044370494 0 9.1386748844376 19.0628581992975 0 9.36671802773498 17.0955814383435 0 0 0 cat,chimp,cow,dog,elephant,guinea_pig,horse,human,macaque,mouse,orangutan,panda,pig, antisense antisense A549@0.180826,AG04450@0.15944,BJ@0.370086,GM12878@0,H1HESC@0.031752,HELAS3@0.0071805,HEPG2@0.016433,HMEC@0.044028,HSMM@0.0890885,HUVEC@0.492031,K562@0.036027,MCF7@0.021898,NHEK@0.039996,NHLF@0.164148,SKNSHRA@0.293359, 0 0 0 0 ENSG00000255434.1 ENST00000532553.1 chr11:75307189-75308315 2 544 580 intronic -5.42 0 0,0,0 0 0,0,0 0 0 0 0 15.4172413793103 9.559 0 19.4310344827586 11.928 0 0 cat,chimp,cow,elephant,horse,human,macaque,marmoset,orangutan,panda,pig, sense_intronic sense_intronic A549@0,AG04450@0,BJ@0.011267,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0.0330255, 0 0 0 0 ENSG00000254630.1 ENST00000530435.1 chr11:75346928-75349632 2 388 2314 intronic 2.41 0 0,0,0 0 0,0,0 0 8.34917891097666 0 0 0.750216076058773 0 0 0.783491789109767 0 0 0 cat,chimp,dog,elephant,human,macaque,marmoset,orangutan, sense_intronic sense_intronic A549@0,AG04450@0,BJ@0.0059395,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000247867.2 ENST00000499390.2 chr11:75469500-75479692 4 1500 8686 exonic 0.55 1 0,1,1 0 0,0,0 0 2.93345613631131 35.4 0 3.4068616163942 66.823 0 4.44232097628367 65.884 0 0 cow,human,macaque,orangutan, lincRNA processed_transcript A549@0,AG04450@0,BJ@0,GM12878@0.0062115,H1HESC@0.0232205,HELAS3@0.0075635,HEPG2@0.031504,HMEC@0,HSMM@0,HUVEC@0.0016165,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000254826.1 ENST00000524768.1 chr11:75486949-75487974 2 840 183 intronic 3.93 0 0,0,0 0 0,0,0 0 0 0 0 0 0 0 0 0 0 0 chimp,elephant,horse,human,macaque,marmoset,orangutan,panda,pig, sense_intronic sense_intronic A549@0.00096,AG04450@0,BJ@0,GM12878@0.149997,H1HESC@0.038394,HELAS3@0.112676,HEPG2@0.0714995,HMEC@0,HSMM@0,HUVEC@0.0037965,K562@0.001212,MCF7@0.005374,NHEK@0.00426,NHLF@0.000225,SKNSHRA@0, 0 0 0 0 ENSG00000254814.1 ENST00000534354.1 chr11:75511922-75514460 3 755 1779 exonic 5.95 1 0,0,0 0 0,0,0 0 0 0 0.935099337748344 8.37549184935357 3.177 0.924503311258278 10.5025295109612 3.141 0 0 chimp,elephant,guinea_pig,human,macaque,marmoset,orangutan, antisense antisense A549@0.0200245,AG04450@0,BJ@0,GM12878@0.0550615,H1HESC@0,HELAS3@0.02395,HEPG2@0.0291005,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0.140384,NHEK@0.0152083,NHLF@0,SKNSHRA@0.0100955, 0 0 0 0 ENSG00000255507.1 ENST00000533945.1 chr11:75514476-75525621 4 569 10570 intergenic 4.64 0 0,1,1 0 0,0,0 0 0 52.508 3.92267135325132 3.92923368022706 158.134 4.09666080843585 5.41210974456007 144.721 0 0 chimp,horse,human,macaque,marmoset,orangutan, antisense antisense A549@0.0315385,AG04450@0.0160695,BJ@0.0042235,GM12878@0.20108,H1HESC@0.0618865,HELAS3@0.186537,HEPG2@0.104362,HMEC@0.01199,HSMM@0,HUVEC@0.272186,K562@0.0214455,MCF7@0.215629,NHEK@0.0184633,NHLF@0.069726,SKNSHRA@0.199298, 0 0 0 0 ENSG00000255507.1 ENST00000533590.1 chr11:75514507-75525618 4 568 10537 intergenic 4.64 0 0,1,1 0 0,0,0 0 0 52.508 3.92957746478873 3.94153933757236 158.134 4.10387323943662 5.42905950460283 144.721 0 0 cat,chimp,cow,horse,human,macaque,marmoset,mouse,orangutan,panda, antisense antisense A549@0.0315385,AG04450@0.0160695,BJ@0.0042235,GM12878@0.20108,H1HESC@0.0618865,HELAS3@0.186537,HEPG2@0.104362,HMEC@0.01199,HSMM@0,HUVEC@0.272186,K562@0.0214455,MCF7@0.215629,NHEK@0.0184633,NHLF@0.069726,SKNSHRA@0.199298, 0 0 0 0 ENSG00000255507.1 ENST00000525580.1 chr11:75514564-75522613 2 350 7697 intergenic -4.12 1 0,0,0 0 0,0,0 0 0 0 0 2.31986488242172 0 0 3.42120306612966 0 0 0 chimp,cow,horse,human,marmoset,orangutan,panda, antisense antisense A549@0.0315385,AG04450@0.0160695,BJ@0.0042235,GM12878@0.20108,H1HESC@0.0618865,HELAS3@0.186537,HEPG2@0.104362,HMEC@0.01199,HSMM@0,HUVEC@0.272186,K562@0.0214455,MCF7@0.215629,NHEK@0.0184633,NHLF@0.069726,SKNSHRA@0.199298, 0 0 0 0 ENSG00000255507.1 ENST00000527219.1 chr11:75520318-75525600 4 563 4713 intergenic 4.64 0 0,1,0 0 0,0,0 0 0 52.508 3.96447602131439 5.02355187778485 158.134 4.14031971580817 6.55060471037556 144.721 0 0 chimp,horse,human,macaque,marmoset,orangutan, antisense antisense A549@0.0315385,AG04450@0.0160695,BJ@0.0042235,GM12878@0.20108,H1HESC@0.0618865,HELAS3@0.186537,HEPG2@0.104362,HMEC@0.01199,HSMM@0,HUVEC@0.272186,K562@0.0214455,MCF7@0.215629,NHEK@0.0184633,NHLF@0.069726,SKNSHRA@0.199298, 0 0 0 0 ENSG00000255507.1 ENST00000531263.1 chr11:75524559-75525842 2 681 600 intergenic 4.64 1 0,1,1 0 0,0,0 0 0 52.508 28.4992657856094 5.85 142.49 28.5330396475771 5.89333333333333 129.243 0 0 cat,chimp,dog,guinea_pig,horse,human,macaque,marmoset,orangutan,panda,pig,rabbit, antisense antisense A549@0.0315385,AG04450@0.0160695,BJ@0.0042235,GM12878@0.20108,H1HESC@0.0618865,HELAS3@0.186537,HEPG2@0.104362,HMEC@0.01199,HSMM@0,HUVEC@0.272186,K562@0.0214455,MCF7@0.215629,NHEK@0.0184633,NHLF@0.069726,SKNSHRA@0.199298, 0 0 0 0 ENSG00000255507.1 ENST00000529719.1 chr11:75525532-75526451 2 442 475 exonic 1.57 0 0,1,0 0 0,0,0 35.3076923076923 51.7178947368421 12.336 96.0475113122172 154.694736842105 48.52 95.7262443438914 130.867368421053 46.86 0 0 cat,chimp,cow,dog,elephant,guinea_pig,horse,human,macaque,marmoset,mouse,orangutan,panda,pig,rabbit,rat, antisense antisense A549@0.0315385,AG04450@0.0160695,BJ@0.0042235,GM12878@0.20108,H1HESC@0.0618865,HELAS3@0.186537,HEPG2@0.104362,HMEC@0.01199,HSMM@0,HUVEC@0.272186,K562@0.0214455,MCF7@0.215629,NHEK@0.0184633,NHLF@0.069726,SKNSHRA@0.199298, 0 0 0 0 ENSG00000255081.1 ENST00000531215.1 chr11:75625245-75626257 2 469 541 intronic 0 0 0,0,1 0 0,0,0 0 0 0 0 0 0 0 0 0 0 1 human,marmoset,orangutan, sense_intronic sense_intronic A549@0.0545915,AG04450@0.019703,BJ@0.043028,GM12878@0.306454,H1HESC@0.015571,HELAS3@0.089336,HEPG2@0.0575065,HMEC@0,HSMM@0,HUVEC@0.472993,K562@0.146487,MCF7@0,NHEK@0.053354,NHLF@0,SKNSHRA@0.082113, 0 0 0 0 ENSG00000255421.1 ENST00000529298.1 chr11:75848359-75848775 2 283 131 exonic -5.55 0 0,0,0 0 0,0,0 0 0 0 0 0 0 0 0 0 1 1 chimp,human,macaque,marmoset,orangutan, antisense antisense A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000254933.1 ENST00000527314.1 chr11:75901769-75906115 2 611 3733 exonic 13.87 0 0,0,0 0 0,0,0 160.777414075286 47.970533083311 180.8 247.469721767594 72.4342351995714 96.388 222.245499181669 72.1551031342084 95.48 0 0 chimp,cow,elephant,guinea_pig,horse,human,macaque,marmoset,orangutan,panda,pig, antisense antisense A549@0,AG04450@0.003842,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000255362.1 ENST00000531538.1 chr11:75922000-75927069 3 385 4680 intergenic 6.52 0 0,0,1 0 0,0,0 0 7.64871794871795 9.614 0 2.29294871794872 0 0 27.8517094017094 0 0 0 chimp,cow,guinea_pig,human,macaque,orangutan, lincRNA lincRNA A549@0,AG04450@0.00763,BJ@0.006237,GM12878@0,H1HESC@0.106248,HELAS3@0.116282,HEPG2@0.021091,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0.0058575, 0 0 0 0 ENSG00000255135.1 ENST00000530759.1 chr11:76152382-76155618 2 597 2637 intergenic 3.78 0 1,1,1 1 0,0,0 16.0134003350084 1.26886613576033 128.594 0.541038525963149 1.57944634053849 233.643 0.537688442211055 1.59082290481608 200.701 0 1 chimp,human,macaque,orangutan, antisense antisense A549@4.36931,AG04450@1.87341,BJ@1.75833,GM12878@6.72776,H1HESC@11.4311,HELAS3@6.83362,HEPG2@3.74139,HMEC@2.59076,HSMM@2.69237,HUVEC@1.35303,K562@8.32696,MCF7@7.77534,NHEK@1.28612,NHLF@2.79201,SKNSHRA@4.0601, 2 44 0 0 ENSG00000255479.1 ENST00000528781.1 chr11:76336506-76337878 2 829 541 intergenic 0.66 0 0,0,0 0 0,0,0 0 0 33.852 0 0 35.665 0 0 35.772 1 1 chimp,human,macaque,marmoset,orangutan, lincRNA lincRNA A549@0,AG04450@0.0633025,BJ@0.0059255,GM12878@0.042579,H1HESC@0,HELAS3@0.012775,HEPG2@0.0052365,HMEC@0,HSMM@0,HUVEC@0.47722,K562@0.011499,MCF7@0,NHEK@0.009322,NHLF@0.037281,SKNSHRA@0, 0 0 0 0 ENSG00000255363.1 ENST00000532413.1 chr11:76339140-76341407 2 557 1708 intergenic 4.42 0 0,1,1 1 0,0,0 20.7953321364452 49.4367681498829 0 0 64.0895784543326 0 2.32495511669659 63.0749414519906 74.997 0 0 cat,chimp,cow,horse,human,macaque,marmoset,mouse,opossum,orangutan,panda,pig,rabbit,rat, lincRNA lincRNA A549@0.0098825,AG04450@0.272078,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@2.12712,K562@0.02204,MCF7@0,NHEK@0.0117307,NHLF@0.0484795,SKNSHRA@0.004066, 0 0 0 0 ENSG00000254810.1 ENST00000531511.1 chr11:76365213-76367756 2 649 1892 intergenic -4.54 0 0,0,1 0 0,0,0 14.4591679506934 44.5919661733615 0 46.7673343605547 55.9302325581395 30.589 47.8674884437596 55.9149048625793 27.398 0 0 cat,chimp,cow,dog,elephant,guinea_pig,horse,human,macaque,marmoset,orangutan,panda,pig, lincRNA lincRNA A549@0.008486,AG04450@0.196594,BJ@0.005496,GM12878@0.004079,H1HESC@0.0334645,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0.0035015,HUVEC@0.53654,K562@0.023881,MCF7@0.0282925,NHEK@0,NHLF@1.1856,SKNSHRA@0.0279115, 0 0 0 0 ENSG00000236304.1 ENST00000447519.1 chr11:76368100-76374910 3 1423 5383 exonic 2.41 1 0,1,0 0 0,0,0 26.5298664792691 90.7579416682147 0 19.4975404075896 117.716143414453 0 17.6654954321855 110.821289243916 0 0 0 cat,chimp,cow,dog,horse,human,macaque,marmoset,orangutan,panda,pig, antisense antisense A549@0,AG04450@0.0177195,BJ@0,GM12878@0,H1HESC@0.03508,HELAS3@0.003278,HEPG2@0.0076515,HMEC@0,HSMM@0,HUVEC@0,K562@0.0032565,MCF7@0,NHEK@0,NHLF@0.0027365,SKNSHRA@0, 0 0 0 0 ENSG00000254975.1 ENST00000533588.1 chr11:76386123-76414239 3 449 27663 intergenic 2.69 0 0,0,1 0 0,0,0 42.2538975501114 0.873296460976756 0 40.4432071269488 9.79647905144055 26.532 67.0334075723831 15.0452228608611 29.133 0 0 cat,chimp,cow,dog,elephant,horse,human,macaque,orangutan,panda,pig, lincRNA lincRNA A549@0.006111,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0.0107585,K562@0.022225,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000254761.1 ENST00000525328.1 chr11:76423440-76430652 2 830 6380 intergenic 6.90 0 0,0,0 0 0,0,0 11.6385542168675 0 0 109.528915662651 10.8912225705329 32.491 159.075903614458 13.8401253918495 87.025 0 0 cat,chimp,cow,dog,guinea_pig,horse,human,macaque,marmoset,orangutan,panda,pig,rat, lincRNA lincRNA A549@1.56465,AG04450@0,BJ@0,GM12878@0.004846,H1HESC@0,HELAS3@3.86735,HEPG2@1.24402,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0.0342335,NHEK@0,NHLF@0,SKNSHRA@0.013369, 0 0 0 0 ENSG00000254632.1 ENST00000533437.1 chr11:76470960-76479267 2 536 7769 intergenic -1.64 0 0,0,0 0 0,0,0 0 12.5101042605226 17.25 0 6.66353456043249 29.812 0 6.77654781825203 29.528 0 0 chimp,cow,horse,human,macaque,marmoset,orangutan,panda, antisense antisense A549@2.0877,AG04450@0.017087,BJ@0.018045,GM12878@0,H1HESC@0.058342,HELAS3@0.342732,HEPG2@0.260846,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0.230569,NHEK@0,NHLF@0,SKNSHRA@0.023433, 0 0 0 0 ENSG00000255100.1 ENST00000528075.1 chr11:76493625-76494106 2 334 145 intronic 0 0 1,1,1 1 0,0,0 102.610778443114 0 0 32.3592814371257 2.55862068965517 121.671 32.2544910179641 2.5448275862069 133.087 0 0 chimp,cow,elephant,guinea_pig,horse,human,macaque,marmoset,mouse,orangutan,panda,pig, antisense antisense A549@0.37985,AG04450@0.074754,BJ@0.0318465,GM12878@0,H1HESC@0.00708,HELAS3@0.267342,HEPG2@0.020142,HMEC@0.04036,HSMM@0,HUVEC@0,K562@0.0891305,MCF7@0.0866705,NHEK@0.049367,NHLF@0.0433695,SKNSHRA@0.073786, 0 0 0 0 ENSG00000255100.1 ENST00000526585.1 chr11:76493674-76494103 2 294 133 intronic 0 0 1,1,1 1 0,0,0 116.571428571429 0 0 39.2857142857143 0 121.671 39.1530612244898 0 133.087 0 0 chimp,cow,elephant,guinea_pig,horse,human,macaque,marmoset,mouse,orangutan,panda,pig,rat, antisense antisense A549@0.37985,AG04450@0.074754,BJ@0.0318465,GM12878@0,H1HESC@0.00708,HELAS3@0.267342,HEPG2@0.020142,HMEC@0.04036,HSMM@0,HUVEC@0,K562@0.0891305,MCF7@0.0866705,NHEK@0.049367,NHLF@0.0433695,SKNSHRA@0.073786, 0 0 0 0 ENSG00000255100.1 ENST00000527778.1 chr11:76493684-76494104 2 291 127 intronic 0 0 1,1,1 1 0,0,0 117.773195876289 0 0 39.6907216494845 0 121.671 39.5567010309278 0 133.087 0 0 chimp,cow,elephant,guinea_pig,horse,human,macaque,marmoset,mouse,orangutan,panda,pig,rat, antisense antisense A549@0.37985,AG04450@0.074754,BJ@0.0318465,GM12878@0,H1HESC@0.00708,HELAS3@0.267342,HEPG2@0.020142,HMEC@0.04036,HSMM@0,HUVEC@0,K562@0.0891305,MCF7@0.0866705,NHEK@0.049367,NHLF@0.0433695,SKNSHRA@0.073786, 0 0 0 0 ENSG00000254988.1 ENST00000530190.1 chr11:76666461-76689663 3 565 22633 exonic -2.58 0 0,0,0 0 0,0,0 35.1079646017699 1.76755180488667 0 135.883185840708 2.30424601245968 4.541 136.992920353982 3.49273185172094 10.6 1 1 chimp,human,macaque,marmoset,orangutan, antisense antisense A549@0.120541,AG04450@0.022708,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0.0144795,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000254808.1 ENST00000525450.1 chr11:76834749-76835776 2 701 324 exonic -0.97 0 0,0,0 0 0,0,0 33.7574893009986 63.9783950617284 11.395 92.8687589158345 75.5462962962963 23.219 106.493580599144 75.3950617283951 25.432 0 0 cat,chimp,cow,dog,elephant,guinea_pig,horse,human,macaque,marmoset,orangutan,panda,pig, antisense antisense A549@0,AG04450@0.004435,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0.003233, 0 0 0 0 ENSG00000254808.1 ENST00000532906.1 chr11:76835553-76837196 2 529 1112 exonic -0.26 0 0,1,1 0 0,0,0 0 21.1753597122302 0 9.09829867674858 29.169964028777 3.472 9.20793950850662 31.0215827338129 3.626 0 0 chimp,cow,horse,human,macaque,marmoset,orangutan,pig, antisense antisense A549@0,AG04450@0.004435,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0.003233, 0 0 0 0 ENSG00000254808.1 ENST00000529777.1 chr11:76835717-76837201 2 405 1077 exonic -2.52 0 0,1,0 0 0,0,0 0 21.8635097493036 0 12.5234567901235 28.3240482822656 3.472 12.6320987654321 30.2228412256267 3.626 0 0 cat,chimp,cow,dog,elephant,guinea_pig,horse,human,macaque,marmoset,orangutan,pig, antisense antisense A549@0,AG04450@0.004435,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0.003233, 0 0 0 0 ENSG00000254985.1 ENST00000529656.1 chr11:77428757-77429456 2 564 133 intronic -6.37 0 0,1,0 0 0,0,0 0 0 0 0 0 0 0 0 0 0 0 NA sense_intronic sense_intronic A549@0.046288,AG04450@0.0434405,BJ@0.029231,GM12878@0.0867465,H1HESC@0.060062,HELAS3@0.0423065,HEPG2@0.045811,HMEC@0,HSMM@0.0063705,HUVEC@0.0264405,K562@0.161249,MCF7@0.006724,NHEK@0.035928,NHLF@0.013611,SKNSHRA@0.042252, 0 0 0 0 ENSG00000255409.1 ENST00000528233.1 chr11:77449725-77450613 2 630 256 intronic -2.68 0 0,0,1 0 0,0,0 0 0 0 0 0 0 0 0 0 0 0 chimp,elephant,guinea_pig,human,macaque,orangutan, sense_intronic sense_intronic A549@0.0111125,AG04450@0.0253175,BJ@0.0456335,GM12878@0.081059,H1HESC@0.0591635,HELAS3@0.050393,HEPG2@0.0467835,HMEC@0.007673,HSMM@0,HUVEC@0.0129295,K562@0.282154,MCF7@0.023207,NHEK@0.031272,NHLF@0,SKNSHRA@0.0175905, 2 44 0 0 ENSG00000254459.1 ENST00000525594.1 chr11:77540700-77583308 2 583 42023 exonic -1.42 0 0,1,0 0 0,0,0 57.9965694682676 10.708040834781 74.898 67.6089193825043 6.87490183946886 25.654 68.5454545454545 16.6900744830212 25.725 0 0 chimp,guinea_pig,human,marmoset,orangutan, processed_transcript processed_transcript A549@0.0077,AG04450@0,BJ@0.0113895,GM12878@0.0318555,H1HESC@0.0078885,HELAS3@0.0661405,HEPG2@0.0448545,HMEC@0,HSMM@0,HUVEC@0,K562@0.0314675,MCF7@0,NHEK@0.00203033,NHLF@0.006943,SKNSHRA@0.0202185, 0 0 0 0 ENSG00000254691.1 ENST00000527012.1 chr11:77561650-77562557 2 549 356 intronic -1.39 0 0,0,0 0 0,0,0 0 0 118.18 0 0 4.216 0 0 12.048 0 0 cat,chimp,human,macaque,marmoset,orangutan, antisense antisense A549@0.003991,AG04450@0.0043405,BJ@0.008843,GM12878@0.0105945,H1HESC@0.0148455,HELAS3@0,HEPG2@0.028929,HMEC@0,HSMM@0.006889,HUVEC@0.0403385,K562@0.0939445,MCF7@0.052545,NHEK@0.000797333,NHLF@0.0116995,SKNSHRA@0.086632, 0 0 0 0 ENSG00000255449.1 ENST00000530972.1 chr11:77577458-77581137 2 710 2967 exonic 4.59 0 0,0,0 0 0,0,0 128.760563380282 9.19447253117627 0 99.8197183098592 0 0 89.3352112676056 114.782608695652 0 1 1 chimp,human,macaque,marmoset,orangutan, processed_transcript processed_transcript A549@0.0974785,AG04450@0.070911,BJ@0.11207,GM12878@0.251611,H1HESC@0.0715175,HELAS3@0.13142,HEPG2@0.180605,HMEC@0.005751,HSMM@0.012484,HUVEC@0.215329,K562@0.449062,MCF7@0.067012,NHEK@0.0993,NHLF@0.00813,SKNSHRA@0.18474, 0 0 0 0 ENSG00000254829.1 ENST00000533697.1 chr11:77726761-77727541 2 684 94 exonic -10.69 0 1,1,1 0 0,0,0 0 0 0 3.84356725146199 0 0 4.03654970760234 0 0 0 0 chimp,cow,dog,elephant,horse,human,macaque,marmoset,orangutan,pig, antisense antisense A549@0,AG04450@0,BJ@0,GM12878@0.154297,H1HESC@0.034657,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0.276539,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000254675.1 ENST00000526730.1 chr11:77733979-77734767 2 275 511 intronic 0 0 0,0,1 0 0,0,0 0 0 0 0 17.8551859099804 0 0 25.3131115459883 0 0 1 chimp,human,macaque,orangutan, antisense antisense A549@0,AG04450@0,BJ@0,GM12878@0.016924,H1HESC@0.0105065,HELAS3@0,HEPG2@0.105594,HMEC@0,HSMM@0.074963,HUVEC@0,K562@0.025147,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000246174.2 ENST00000532831.1 chr11:77850817-77853105 2 854 1432 intergenic 0.69 0 0,1,0 1 0,0,0 0 0 34.192 8.00702576112412 0 49.512 8.28103044496487 0 44.49 0 1 chimp,human,macaque,orangutan, lincRNA processed_transcript A549@0.731627,AG04450@0.90162,BJ@0.408462,GM12878@1.0115,H1HESC@0.765896,HELAS3@2.02159,HEPG2@1.73007,HMEC@0.315473,HSMM@0.515467,HUVEC@0.385133,K562@2.76757,MCF7@0.741865,NHEK@0.448385,NHLF@0.383863,SKNSHRA@1.66059, 0 0 0 0 ENSG00000246174.2 ENST00000523626.2 chr11:77850839-77885023 3 552 33628 exonic -4.20 0 0,1,0 1 0,1,0 185.157608695652 10.8885749970263 34.192 161.226449275362 9.50020815986678 49.512 136.259057971014 10.084631854407 44.49 0 0 chimp,horse,human,macaque,marmoset,orangutan, lincRNA processed_transcript A549@0.731627,AG04450@0.90162,BJ@0.408462,GM12878@1.0115,H1HESC@0.765896,HELAS3@2.02159,HEPG2@1.73007,HMEC@0.315473,HSMM@0.515467,HUVEC@0.385133,K562@2.76757,MCF7@0.741865,NHEK@0.448385,NHLF@0.383863,SKNSHRA@1.66059, 0 0 0 0 ENSG00000246174.2 ENST00000530261.1 chr11:77850841-77884852 4 906 33099 exonic 2.06 0 0,1,0 1 0,1,0 33.3156732891832 9.89498172150216 34.192 51.2075055187638 8.03631529653464 49.512 51.1799116997792 8.64183207951902 44.49 0 0 elephant,horse,human,macaque, lincRNA processed_transcript A549@0.731627,AG04450@0.90162,BJ@0.408462,GM12878@1.0115,H1HESC@0.765896,HELAS3@2.02159,HEPG2@1.73007,HMEC@0.315473,HSMM@0.515467,HUVEC@0.385133,K562@2.76757,MCF7@0.741865,NHEK@0.448385,NHLF@0.383863,SKNSHRA@1.66059, 0 0 0 0 ENSG00000246174.2 ENST00000500113.1 chr11:77850849-77854134 2 1787 1496 intergenic 0.69 0 1,1,1 1 0,0,0 0 0 34.192 9.40682708449916 0 49.512 9.67039731393397 0 44.49 1 1 chimp,human,macaque,marmoset,orangutan, lincRNA processed_transcript A549@0.731627,AG04450@0.90162,BJ@0.408462,GM12878@1.0115,H1HESC@0.765896,HELAS3@2.02159,HEPG2@1.73007,HMEC@0.315473,HSMM@0.515467,HUVEC@0.385133,K562@2.76757,MCF7@0.741865,NHEK@0.448385,NHLF@0.383863,SKNSHRA@1.66059, 0 0 0 0 ENSG00000246174.2 ENST00000527321.1 chr11:77850861-77852968 2 584 1521 intergenic 2.06 0 0,1,0 1 0,0,0 0 0 34.192 11.708904109589 0 49.512 12.1095890410959 0 44.49 0 0 cat,chimp,dog,elephant,guinea_pig,human,macaque,marmoset,mouse,orangutan,panda,rabbit,rat, lincRNA processed_transcript A549@0.731627,AG04450@0.90162,BJ@0.408462,GM12878@1.0115,H1HESC@0.765896,HELAS3@2.02159,HEPG2@1.73007,HMEC@0.315473,HSMM@0.515467,HUVEC@0.385133,K562@2.76757,MCF7@0.741865,NHEK@0.448385,NHLF@0.383863,SKNSHRA@1.66059, 0 0 0 0 ENSG00000246174.2 ENST00000528468.1 chr11:77878227-77884940 2 552 6159 exonic -2.85 0 0,0,1 0 0,1,0 158.463768115942 20.3013476213671 0 153.280797101449 15.1323266764085 0 142.501811594203 15.9691508361747 0 0 0 cat,chimp,cow,dog,elephant,guinea_pig,horse,human,macaque,marmoset,mouse,orangutan,panda,rabbit,rat, lincRNA processed_transcript A549@0.731627,AG04450@0.90162,BJ@0.408462,GM12878@1.0115,H1HESC@0.765896,HELAS3@2.02159,HEPG2@1.73007,HMEC@0.315473,HSMM@0.515467,HUVEC@0.385133,K562@2.76757,MCF7@0.741865,NHEK@0.448385,NHLF@0.383863,SKNSHRA@1.66059, 0 0 0 0 ENSG00000254420.1 ENST00000534168.1 chr11:78035804-78155095 2 435 118854 exonic -4.65 0 0,0,1 0 0,0,0 90.6114942528736 19.4398589866559 0 122.712643678161 21.6018644723779 3.224 124.786206896552 25.0436922610934 6.179 0 0 cat,chimp,cow,dog,elephant,guinea_pig,horse,human,macaque,marmoset,mouse,opossum,orangutan,panda,pig,rabbit,rat, antisense antisense A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0.005201, 0 0 0 0 ENSG00000254649.1 ENST00000527030.1 chr11:78099107-78103451 2 363 3979 intronic -7.32 0 0,1,0 0 0,0,0 0 0 0 15.9118457300275 1.94923347574768 0 16.8815426997245 7.44106559437045 0 0 0 chimp,human,macaque,marmoset,orangutan,rabbit, antisense antisense A549@0,AG04450@0,BJ@0,GM12878@0.008012,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000251323.2 ENST00000513207.2 chr11:78135028-78140882 4 1638 4210 intergenic -4.07 1 0,0,1 0 0,0,0 107.326617826618 37.4180522565321 0 91.484126984127 25.067458432304 0 98.032967032967 29.809026128266 11.421 0 0 cat,chimp,cow,dog,elephant,guinea_pig,horse,human,macaque,marmoset,orangutan,panda,pig,rabbit, lincRNA lincRNA A549@0.224555,AG04450@0.093595,BJ@0.110285,GM12878@0.312045,H1HESC@0.355474,HELAS3@0.334944,HEPG2@0.379857,HMEC@0.02743,HSMM@0.028957,HUVEC@0.184078,K562@0.491392,MCF7@0.145924,NHEK@0.180118,NHLF@0.0330875,SKNSHRA@0.43552, 0 0 0 0 ENSG00000255084.1 ENST00000526976.1 chr11:78244222-78269611 4 713 24670 intronic -6.85 1 0,0,0 0 0,0,0 0 6.58954195379003 0 0 6.21151195784353 0 8.72230014025245 7.11414673692744 0 0 0 chimp,cow,dog,guinea_pig,horse,human,macaque,marmoset,mouse,orangutan,pig,rabbit,rat, antisense antisense A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000254563.1 ENST00000526741.1 chr11:78460295-78467525 2 318 6910 intronic 3.92 0 0,0,0 0 0,0,0 117.974842767296 14.6506512301013 64.164 116.830188679245 12.5575976845152 68.49 143.122641509434 12.7988422575977 78.094 0 0 chimp,elephant,guinea_pig,horse,human,macaque,marmoset,mouse,orangutan,panda,rabbit, antisense antisense A549@0,AG04450@0.0440095,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0.00398933,NHLF@0,SKNSHRA@0.0425655, 0 0 0 0 ENSG00000255345.1 ENST00000525952.1 chr11:78803893-78804880 4 402 579 intronic 2.51 1 0,1,0 0 0,0,0 0 0 0 0 3.30224525043178 0 0 0 0 0 0 chimp,dog,horse,human,macaque,marmoset,orangutan, lincRNA lincRNA A549@0.0070045,AG04450@0.130291,BJ@0.161946,GM12878@0.040393,H1HESC@0,HELAS3@0,HEPG2@0.001438,HMEC@0.116821,HSMM@0.20696,HUVEC@0.024525,K562@0.0080465,MCF7@0.005371,NHEK@0.0469973,NHLF@0.124182,SKNSHRA@0.184041, 0 0 0 0 ENSG00000255345.1 ENST00000534593.1 chr11:78804331-78809048 2 718 3997 intronic -1.18 0 0,0,1 0 0,0,0 42.0153203342618 22.4918689016763 0 25.2604456824513 18.1018263697773 1.912 21.2646239554318 18.1093319989992 0 0 0 cat,chimp,cow,dog,elephant,guinea_pig,horse,human,macaque,marmoset,orangutan,panda,rabbit, lincRNA lincRNA A549@0.0070045,AG04450@0.130291,BJ@0.161946,GM12878@0.040393,H1HESC@0,HELAS3@0,HEPG2@0.001438,HMEC@0.116821,HSMM@0.20696,HUVEC@0.024525,K562@0.0080465,MCF7@0.005371,NHEK@0.0469973,NHLF@0.124182,SKNSHRA@0.184041, 0 0 0 0 ENSG00000255345.1 ENST00000526091.1 chr11:78804344-78808899 2 1895 2658 intronic 8.30 0 0,0,1 0 0,0,0 35.2200527704485 20.0620767494357 0 30.9240105540897 11.997366440933 1.912 29.8522427440633 11.6933784800602 0 0 1 chimp,human,macaque,marmoset, lincRNA lincRNA A549@0.0070045,AG04450@0.130291,BJ@0.161946,GM12878@0.040393,H1HESC@0,HELAS3@0,HEPG2@0.001438,HMEC@0.116821,HSMM@0.20696,HUVEC@0.024525,K562@0.0080465,MCF7@0.005371,NHEK@0.0469973,NHLF@0.124182,SKNSHRA@0.184041, 0 0 0 0 ENSG00000254885.1 ENST00000527440.1 chr11:78902603-78904205 2 372 1228 intronic 0.50 0 0,0,0 0 0,0,0 0 0 0 0 0 15.093 0 3.16612377850163 15.249 0 1 human,orangutan, lincRNA lincRNA A549@0.005804,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0.007435, 3 10 0 0 ENSG00000255209.1 ENST00000526851.1 chr11:79316011-79323344 2 832 6499 intergenic 2.26 1 0,0,0 0 0,0,0 0 6.26373288198184 0 0 15.1170949376827 5.67 0 16.6794891521773 5.964 0 0 chimp,cow,elephant,human,macaque,marmoset,orangutan,pig, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000254434.1 ENST00000532605.1 chr11:80032664-80038955 2 583 5706 intergenic -12.64 0 0,0,0 0 0,0,0 0 9.16701717490361 109.5 11.6603773584906 10.4568874868559 447.516 12.1132075471698 10.9849281458114 468.15 0 0 cat,chimp,cow,dog,elephant,horse,human,macaque,marmoset,orangutan,panda,pig, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000255178.1 ENST00000526840.1 chr11:80462243-80473869 3 1568 10054 intergenic -1.60 0 0,0,1 0 0,0,0 0 0 0 0 0.894569325641536 1.488 5.28061224489796 1.2644718519992 1.554 0 0 guinea_pig,human,macaque,orangutan, lincRNA lincRNA A549@0,AG04450@0,BJ@0.0022775,GM12878@0.006761,H1HESC@0,HELAS3@0.0014385,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000245832.2 ENST00000530896.1 chr11:81590893-81811085 3 527 219661 intergenic 2.43 0 0,0,0 0 0,0,0 0 3.93556889934945 0 0 7.77210337747711 0 0 8.55665775900137 0 0 0 chimp,cow,dog,elephant,horse,human,macaque,marmoset,orangutan,panda,rabbit, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0.003406,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000245832.2 ENST00000500502.1 chr11:81590896-82114955 8 1389 522656 intergenic 1.36 1 0,0,0 0 0,0,0 0 4.70309725708688 0 0 7.84215047756077 0 0 8.83382760362456 0 1 1 chimp,human,macaque,marmoset,orangutan, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0.003406,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000254511.1 ENST00000526154.1 chr11:81682036-81698855 2 340 16477 intergenic 0.91 0 0,0,0 0 0,0,0 0 0 0 0 1.70528615646052 0 0 2.34393396856224 0 0 0 NA lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@1.12957,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000245832.2 ENST00000532217.1 chr11:81811235-82429124 5 567 617314 intergenic -3.29 0 0,0,0 0 0,0,0 59.4426807760141 7.10049342797993 0 30.342151675485 10.1854420926789 28.786 28.3139329805996 11.8442494419372 33.275 0 0 chimp,guinea_pig,human,macaque,marmoset,mouse,orangutan, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0.003406,NHLF@0,SKNSHRA@0, 1 96 0 0 ENSG00000255246.1 ENST00000527364.1 chr11:82314785-82354461 4 736 38934 intergenic 3.11 1 0,0,0 0 0,0,0 0 23.5591256999024 0 4.50407608695652 22.7675296655879 3.107 7.65217391304348 23.0856577798325 3.263 0 0 chimp,cow,human,macaque,marmoset,orangutan, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000255382.1 ENST00000526305.1 chr11:82502704-82528188 2 444 25038 intergenic -3.33 1 0,0,0 0 0,0,0 0 26.6301621535266 82.572 0 27.1238517453471 72.347 0 64.4887770588705 64.111 0 0 cat,chimp,dog,elephant,guinea_pig,horse,human,macaque,marmoset,orangutan,panda,rabbit, processed_transcript processed_transcript A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0.005087, 0 0 0 0 ENSG00000255263.1 ENST00000530030.1 chr11:82530209-82533921 2 863 2847 intergenic 6.11 0 0,0,0 0 0,1,0 0 3.01369863013699 0 3.1981460023175 1.62346329469617 0 6.58748551564311 4.20758693361433 0 0 0 cat,chimp,cow,dog,elephant,horse,human,macaque,marmoset,orangutan,panda,pig, antisense antisense A549@0.0063865,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0.0061905,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000254698.1 ENST00000527550.1 chr11:82674723-82750157 2 431 75001 intronic -10.16 0 0,0,0 0 0,0,0 0 31.6259649871335 0 0 27.1840908787883 11.835 0 27.5536459513873 20.061 0 0 chimp,horse,human,macaque,orangutan, processed_transcript processed_transcript A549@0,AG04450@0,BJ@0,GM12878@0.0212515,H1HESC@0,HELAS3@0.0239825,HEPG2@0.0086845,HMEC@0,HSMM@0,HUVEC@0.0418915,K562@0.004394,MCF7@0,NHEK@0.00426067,NHLF@0,SKNSHRA@0.0111575, 0 0 0 0 ENSG00000246067.2 ENST00000501011.2 chr11:82783108-82784688 3 604 972 intergenic -0.49 1 1,1,1 1 0,0,0 0 0 350.083 9.78311258278146 8.70473251028807 415.019 12.2516556291391 13.3991769547325 447.016 0 0 chimp,cow,dog,elephant,guinea_pig,horse,human,macaque,marmoset,orangutan,pig,rabbit, lincRNA lincRNA A549@5.39434,AG04450@3.13971,BJ@1.83014,GM12878@6.69827,H1HESC@2.11716,HELAS3@9.43131,HEPG2@4.63545,HMEC@0.632653,HSMM@1.29055,HUVEC@1.90292,K562@8.09398,MCF7@7.40895,NHEK@2.51855,NHLF@2.82726,SKNSHRA@3.66917, 0 0 0 0 ENSG00000246067.2 ENST00000527627.1 chr11:82783108-82817761 3 501 34148 intergenic 0.14 0 0,1,1 1 0,0,0 0 3.40148764202882 350.083 63.2554890219561 4.27708797001289 415.019 214.107784431138 6.02052828862598 447.016 0 0 chimp,dog,elephant,human,macaque,marmoset,mouse,opossum,pig,rabbit,rat, lincRNA lincRNA A549@5.39434,AG04450@3.13971,BJ@1.83014,GM12878@6.69827,H1HESC@2.11716,HELAS3@9.43131,HEPG2@4.63545,HMEC@0.632653,HSMM@1.29055,HUVEC@1.90292,K562@8.09398,MCF7@7.40895,NHEK@2.51855,NHLF@2.82726,SKNSHRA@3.66917, 0 0 0 0 ENSG00000246067.2 ENST00000526795.1 chr11:82783124-82788215 4 563 4522 intergenic -0.49 0 0,1,0 1 0,0,0 0 0 350.083 10.4955595026643 4.52078726227333 413.378 10.9857904085258 6.87173816895179 443.458 0 0 chimp,cow,elephant,human,macaque,marmoset,orangutan,pig, lincRNA lincRNA A549@5.39434,AG04450@3.13971,BJ@1.83014,GM12878@6.69827,H1HESC@2.11716,HELAS3@9.43131,HEPG2@4.63545,HMEC@0.632653,HSMM@1.29055,HUVEC@1.90292,K562@8.09398,MCF7@7.40895,NHEK@2.51855,NHLF@2.82726,SKNSHRA@3.66917, 0 0 0 0 ENSG00000246067.2 ENST00000533528.1 chr11:82783146-82803380 2 338 19894 intergenic 0 0 1,1,1 1 0,0,0 0 1.53131597466573 344.878 0 2.87368050668543 405.58 0 5.07479642103147 436.05 1 1 chimp,human,macaque,marmoset,orangutan, lincRNA lincRNA A549@5.39434,AG04450@3.13971,BJ@1.83014,GM12878@6.69827,H1HESC@2.11716,HELAS3@9.43131,HEPG2@4.63545,HMEC@0.632653,HSMM@1.29055,HUVEC@1.90292,K562@8.09398,MCF7@7.40895,NHEK@2.51855,NHLF@2.82726,SKNSHRA@3.66917, 0 0 0 0 ENSG00000246067.2 ENST00000533708.1 chr11:82783160-82784425 2 823 440 intergenic -0.49 0 1,1,1 1 0,0,0 0 0 340.02 9.11786148238153 5.37954545454545 397.922 17.9599027946537 0 428.518 1 1 chimp,human,macaque,marmoset,orangutan, lincRNA lincRNA A549@5.39434,AG04450@3.13971,BJ@1.83014,GM12878@6.69827,H1HESC@2.11716,HELAS3@9.43131,HEPG2@4.63545,HMEC@0.632653,HSMM@1.29055,HUVEC@1.90292,K562@8.09398,MCF7@7.40895,NHEK@2.51855,NHLF@2.82726,SKNSHRA@3.66917, 0 0 0 0 ENSG00000246067.2 ENST00000534499.1 chr11:82783164-82784236 2 595 475 intergenic -0.49 0 1,1,1 1 0,0,0 0 0 338.632 0 5.53684210526316 395.734 0 0 426.366 1 1 chimp,human,macaque,marmoset,orangutan, lincRNA lincRNA A549@5.39434,AG04450@3.13971,BJ@1.83014,GM12878@6.69827,H1HESC@2.11716,HELAS3@9.43131,HEPG2@4.63545,HMEC@0.632653,HSMM@1.29055,HUVEC@1.90292,K562@8.09398,MCF7@7.40895,NHEK@2.51855,NHLF@2.82726,SKNSHRA@3.66917, 0 0 0 0 ENSG00000246067.2 ENST00000528156.1 chr11:82783385-82784642 2 656 599 intergenic -1.75 1 0,0,1 0 0,0,0 0 0 287.232 2.55030487804878 9.73455759599332 322.333 4.53048780487805 21.7429048414023 360.445 0 0 cat,chimp,cow,horse,human,macaque,marmoset,orangutan,pig, lincRNA lincRNA A549@5.39434,AG04450@3.13971,BJ@1.83014,GM12878@6.69827,H1HESC@2.11716,HELAS3@9.43131,HEPG2@4.63545,HMEC@0.632653,HSMM@1.29055,HUVEC@1.90292,K562@8.09398,MCF7@7.40895,NHEK@2.51855,NHLF@2.82726,SKNSHRA@3.66917, 0 0 0 0 ENSG00000246067.2 ENST00000530270.1 chr11:82783397-82784754 2 858 497 intergenic -0.49 0 0,0,1 0 0,0,0 0 0 281.784 1.94988344988345 11.7323943661972 317.433 3.46386946386946 26.20523138833 358.921 0 0 chimp,cow,dog,elephant,horse,human,macaque,marmoset,orangutan,panda,pig, lincRNA lincRNA A549@5.39434,AG04450@3.13971,BJ@1.83014,GM12878@6.69827,H1HESC@2.11716,HELAS3@9.43131,HEPG2@4.63545,HMEC@0.632653,HSMM@1.29055,HUVEC@1.90292,K562@8.09398,MCF7@7.40895,NHEK@2.51855,NHLF@2.82726,SKNSHRA@3.66917, 0 0 0 0 ENSG00000255503.1 ENST00000533329.1 chr11:82783444-82808238 3 433 24357 intergenic -1.70 0 0,1,0 0 0,0,0 0 3.39368559346389 0 0 4.17633534507534 0 0 6.19062281890216 0 0 0 chimp,dog,horse,human,macaque,marmoset,pig, lincRNA lincRNA A549@0.0071195,AG04450@0.0366585,BJ@0,GM12878@0.009247,H1HESC@0.01335,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0.0094385,HUVEC@0,K562@0,MCF7@0,NHEK@0.002928,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000254676.1 ENST00000528133.1 chr11:82891186-82895562 2 903 3471 intronic -9.11 0 0,0,0 0 0,0,0 0 69.8988764044944 0 0 99.2869490060501 0 0 95.6292134831461 0 0 0 chimp,horse,human,macaque,marmoset,orangutan,pig, processed_transcript processed_transcript A549@0.169329,AG04450@0.166683,BJ@0.122271,GM12878@0.315269,H1HESC@0.081687,HELAS3@0.363275,HEPG2@0.113146,HMEC@0.093101,HSMM@0.047881,HUVEC@0.184177,K562@0.229735,MCF7@0.303546,NHEK@0.194182,NHLF@0.036747,SKNSHRA@0.137497, 0 0 0 0 ENSG00000247137.2 ENST00000528524.1 chr11:82902071-82904836 3 546 2215 exonic 8.06 0 0,1,1 0 0,0,0 76.8717948717949 11.2144469525959 0 89.489010989011 13.9905191873589 19.79 89.9249084249084 17.779683972912 21.06 0 0 cat,chimp,dog,elephant,guinea_pig,horse,human,macaque,marmoset,orangutan,panda,pig,rabbit, lincRNA lincRNA A549@1.73062,AG04450@1.14156,BJ@1.20011,GM12878@1.33146,H1HESC@1.13603,HELAS3@5.27533,HEPG2@3.30207,HMEC@0.960867,HSMM@0.625252,HUVEC@0.913818,K562@2.13921,MCF7@0.806959,NHEK@0.721137,NHLF@0.291013,SKNSHRA@2.03666, 0 0 0 0 ENSG00000247137.2 ENST00000530825.1 chr11:82902105-82903858 4 371 1376 intergenic 0 0 0,0,1 0 0,0,0 46.4150943396226 5.00581395348837 42.976 39.4609164420485 4.11918604651163 61.317 40.5660377358491 10.4774709302326 60.791 0 1 chimp,human,macaque,orangutan, lincRNA lincRNA A549@1.73062,AG04450@1.14156,BJ@1.20011,GM12878@1.33146,H1HESC@1.13603,HELAS3@5.27533,HEPG2@3.30207,HMEC@0.960867,HSMM@0.625252,HUVEC@0.913818,K562@2.13921,MCF7@0.806959,NHEK@0.721137,NHLF@0.291013,SKNSHRA@2.03666, 0 0 0 0 ENSG00000247137.2 ENST00000529031.1 chr11:82902105-82904642 4 431 2100 intergenic -0.77 0 1,1,1 1 0,0,0 97.3828306264501 11.8285714285714 0 52.7494199535963 14.7566666666667 41.581 53.4686774941995 18.7533333333333 41.509 0 1 chimp,human,macaque,orangutan, lincRNA lincRNA A549@1.73062,AG04450@1.14156,BJ@1.20011,GM12878@1.33146,H1HESC@1.13603,HELAS3@5.27533,HEPG2@3.30207,HMEC@0.960867,HSMM@0.625252,HUVEC@0.913818,K562@2.13921,MCF7@0.806959,NHEK@0.721137,NHLF@0.291013,SKNSHRA@2.03666, 0 0 0 0 ENSG00000247137.2 ENST00000529811.1 chr11:82902107-82904662 4 425 2124 intergenic -0.77 1 1,1,1 1 0,0,0 98.7576470588235 11.6949152542373 0 53.4941176470588 14.5899246704331 41.581 54.2235294117647 18.5414312617702 41.509 0 0 chimp,human,macaque,orangutan,rabbit, lincRNA lincRNA A549@1.73062,AG04450@1.14156,BJ@1.20011,GM12878@1.33146,H1HESC@1.13603,HELAS3@5.27533,HEPG2@3.30207,HMEC@0.960867,HSMM@0.625252,HUVEC@0.913818,K562@2.13921,MCF7@0.806959,NHEK@0.721137,NHLF@0.291013,SKNSHRA@2.03666, 0 0 0 0 ENSG00000247137.2 ENST00000529607.1 chr11:82903062-82904611 4 448 1095 intergenic -0.77 0 1,1,1 1 0,0,0 55.25 16.3945205479452 0 18.0691964285714 23.124200913242 41.581 17.8459821428571 22.7990867579909 41.509 0 1 chimp,human,macaque,orangutan, lincRNA lincRNA A549@1.73062,AG04450@1.14156,BJ@1.20011,GM12878@1.33146,H1HESC@1.13603,HELAS3@5.27533,HEPG2@3.30207,HMEC@0.960867,HSMM@0.625252,HUVEC@0.913818,K562@2.13921,MCF7@0.806959,NHEK@0.721137,NHLF@0.291013,SKNSHRA@2.03666, 0 0 0 0 ENSG00000247137.2 ENST00000500634.2 chr11:82903179-82904704 2 874 649 intergenic 8.06 0 0,1,0 1 0,0,0 28.3203661327231 27.6610169491525 0 12.033180778032 39.0154083204931 38.813 11.9187643020595 38.4668721109399 38.741 0 1 chimp,human,macaque,orangutan, lincRNA lincRNA A549@1.73062,AG04450@1.14156,BJ@1.20011,GM12878@1.33146,H1HESC@1.13603,HELAS3@5.27533,HEPG2@3.30207,HMEC@0.960867,HSMM@0.625252,HUVEC@0.913818,K562@2.13921,MCF7@0.806959,NHEK@0.721137,NHLF@0.291013,SKNSHRA@2.03666, 0 0 0 0 ENSG00000247137.2 ENST00000528083.1 chr11:82903315-82904705 3 544 842 intergenic 8.06 0 0,1,0 1 0,0,0 45.5 21.3206650831354 0 19.96875 30.0724465558195 38.467 19.7849264705882 29.6496437054632 38.395 0 1 chimp,human,macaque,orangutan, lincRNA lincRNA A549@1.73062,AG04450@1.14156,BJ@1.20011,GM12878@1.33146,H1HESC@1.13603,HELAS3@5.27533,HEPG2@3.30207,HMEC@0.960867,HSMM@0.625252,HUVEC@0.913818,K562@2.13921,MCF7@0.806959,NHEK@0.721137,NHLF@0.291013,SKNSHRA@2.03666, 0 0 0 0 ENSG00000254551.1 ENST00000531869.1 chr11:82920473-82924421 2 764 3182 exonic 3.29 0 0,0,1 0 0,0,0 0 38.1920175989943 0 38.5589005235602 63.9208045254557 6.62 383.700261780105 110.975801382778 21.975 0 0 cat,chimp,cow,dog,elephant,guinea_pig,horse,human,macaque,marmoset,mouse,opossum,orangutan,panda,pig,rabbit,rat, antisense antisense A549@0.0100455,AG04450@0.012001,BJ@0.0440665,GM12878@0.0166465,H1HESC@0,HELAS3@0.0394625,HEPG2@0.03561,HMEC@0.005345,HSMM@0.248395,HUVEC@0.0309475,K562@0,MCF7@0.0211165,NHEK@0.0203323,NHLF@0.017774,SKNSHRA@0.183144, 0 0 0 0 ENSG00000255234.1 ENST00000530045.1 chr11:82997171-83134559 5 2638 134742 exonic 4.68 1 0,1,0 1 0,0,0 0 3.64742248148313 12.428 2.55875663381349 5.88612310934972 22.496 3.50341167551175 8.48440723753544 15.473 0 1 chimp,human, processed_transcript processed_transcript A549@0.010507,AG04450@0.0308635,BJ@0.029908,GM12878@0.069116,H1HESC@0.04091,HELAS3@0.314347,HEPG2@0.261489,HMEC@0.001549,HSMM@0.0042285,HUVEC@0.061263,K562@0.0102565,MCF7@0.0207245,NHEK@0.026103,NHLF@0.0029445,SKNSHRA@0.0767605, 0 0 0 0 ENSG00000255234.1 ENST00000534572.1 chr11:82997402-83016167 3 450 18311 exonic 0 0 0,0,0 0 0,0,0 0 7.77472557479111 12.428 11.4222222222222 7.39151329801758 22.496 12.26 8.64622358145377 16.768 0 0 chimp,horse,human,macaque,marmoset,orangutan, processed_transcript processed_transcript A549@0.010507,AG04450@0.0308635,BJ@0.029908,GM12878@0.069116,H1HESC@0.04091,HELAS3@0.314347,HEPG2@0.261489,HMEC@0.001549,HSMM@0.0042285,HUVEC@0.061263,K562@0.0102565,MCF7@0.0207245,NHEK@0.026103,NHLF@0.0029445,SKNSHRA@0.0767605, 0 0 0 0 ENSG00000255311.1 ENST00000531424.1 chr11:83354645-83359086 5 540 3893 intronic -3.31 1 0,0,0 0 0,0,0 0 13.2134600565117 2.629 41.0166666666667 10.3200616491138 8.797 48.9555555555556 12.7200102748523 16.724 0 0 chimp,cow,horse,human,macaque,marmoset,orangutan,panda, antisense antisense A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0.346905,HEPG2@0.0669925,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0.0074055, 0 0 0 0 ENSG00000255311.1 ENST00000533669.1 chr11:83356773-83436433 8 900 78746 exonic -0.36 1 0,0,1 0 0,0,0 31.0244444444444 22.0707845477865 24.42 30.6922222222222 21.5545678510655 34.058 41.9033333333333 21.7211667894242 35.786 1 1 chimp,human,macaque,marmoset,orangutan, antisense antisense A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0.346905,HEPG2@0.0669925,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0.0074055, 0 0 0 0 ENSG00000255311.1 ENST00000533101.1 chr11:83356827-83363053 3 573 5649 exonic 2.68 0 0,0,0 0 0,0,0 0 1.36891485218623 19.04 12.9284467713787 0.507700477960701 41.314 13.4642233856894 2.0987785448752 51.613 0 0 chimp,cow,elephant,guinea_pig,horse,human,macaque,marmoset,orangutan,panda,pig,rabbit, antisense antisense A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0.346905,HEPG2@0.0669925,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0.0074055, 0 0 0 0 ENSG00000255311.1 ENST00000526344.1 chr11:83357645-83359086 3 748 689 intronic -1.52 1 0,0,0 0 0,0,0 0 0 19.04 3.83422459893048 0 46.044 4.15508021390374 0 56.598 0 0 chimp,elephant,guinea_pig,horse,human,macaque,marmoset,orangutan, antisense antisense A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0.346905,HEPG2@0.0669925,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0.0074055, 0 0 0 0 ENSG00000254787.1 ENST00000534275.1 chr11:84431869-84511744 4 347 79522 intronic 5.83 1 0,0,0 0 0,0,0 26.0230547550432 5.242373179749 334.38 46.8414985590778 8.53997635874349 264.059 58.2103746397695 9.43733809511833 245.828 0 0 chimp,human,macaque,orangutan,panda, antisense antisense A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0.023041,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000255555.1 ENST00000532123.1 chr11:84647733-84666749 2 417 18597 intronic -7.02 0 0,1,0 0 0,0,0 0 14.3557025326666 0 0 16.001236758617 0 0 16.1505081464752 0 0 0 chimp,dog,horse,human,macaque,marmoset,orangutan,panda,pig, antisense antisense A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000255005.1 ENST00000531414.1 chr11:85627545-85634725 4 444 6730 intronic 0.32 1 0,1,1 0 0,0,0 0 3.7444279346211 0 0 5.97325408618128 0 0 7.72065378900446 0 0 0 chimp,elephant,human,macaque,marmoset,orangutan, antisense antisense A549@0.0061655,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0.009317,HEPG2@0.0095115,HMEC@0,HSMM@0,HUVEC@0.0596065,K562@0.0179285,MCF7@0.0045895,NHEK@0,NHLF@0,SKNSHRA@0.0302225, 0 0 0 0 ENSG00000254699.1 ENST00000530126.1 chr11:85903829-85904524 2 176 517 intergenic 0 0 0,1,0 0 0,0,0 0 28.1992263056093 0 78.2215909090909 31.816247582205 14.712 80.4375 41.4912959381044 15.181 0 0 chimp,cow,horse,human,macaque,marmoset,orangutan,rabbit, lincRNA lincRNA A549@0.0121945,AG04450@0,BJ@0,GM12878@0.133792,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000254733.1 ENST00000524610.1 chr11:86142632-86333909 3 408 190865 intronic 10.21 0 0,1,1 0 0,0,0 55.4705882352941 13.2030807114977 0 108.563725490196 15.2761637806827 1.736 240.81862745098 17.9614963455846 1.757 0 0 cat,chimp,cow,dog,elephant,guinea_pig,horse,human,macaque,marmoset,mouse,opossum,orangutan,pig,platypus,rabbit,rat, processed_transcript processed_transcript A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0.0295795,K562@0.0066315,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000254731.1 ENST00000526206.1 chr11:86414141-86425134 2 430 10561 intergenic 4.35 0 0,0,0 0 0,0,0 0 1.62257361992236 0 0 1.19486791023577 0 0 2.32032951425054 0 0 0 cat,chimp,cow,dog,horse,human,macaque,marmoset,orangutan,panda,pig,rabbit, lincRNA lincRNA A549@0.201993,AG04450@0.0613435,BJ@0.0485455,GM12878@0,H1HESC@0,HELAS3@0.0889165,HEPG2@0,HMEC@0,HSMM@0.0105535,HUVEC@0.168403,K562@0,MCF7@0.235855,NHEK@0.012197,NHLF@0.008933,SKNSHRA@0.165353, 0 0 0 0 ENSG00000255250.1 ENST00000532979.1 chr11:86438397-86476307 5 498 37404 intergenic 5.14 0 0,0,0 0 0,0,0 0 12.8960806330874 0 0 10.3861084376003 0 0 11.233798524222 0 0 0 chimp,horse,human,macaque,marmoset,orangutan, lincRNA lincRNA A549@0.101402,AG04450@0.03621,BJ@0,GM12878@0,H1HESC@0,HELAS3@0.0232325,HEPG2@0,HMEC@0.016281,HSMM@0.004532,HUVEC@0,K562@0,MCF7@0.0243445,NHEK@0,NHLF@0,SKNSHRA@0.126432, 0 0 0 0 ENSG00000255471.1 ENST00000528660.1 chr11:86603256-86633146 3 1153 28733 intronic -0.25 0 0,0,0 0 0,0,0 24.3026886383348 6.12219399296976 0 63.6652211621856 17.2796784185431 0 66.2098872506505 18.3111056972819 4.144 0 0 cat,chimp,elephant,guinea_pig,horse,human,macaque,marmoset,orangutan,panda, antisense antisense A549@0.0436445,AG04450@0.181386,BJ@0.63265,GM12878@0,H1HESC@0.143535,HELAS3@0.134667,HEPG2@0.338168,HMEC@0.003542,HSMM@0.030399,HUVEC@1.05068,K562@0.277855,MCF7@0.083868,NHEK@0.010514,NHLF@0.217625,SKNSHRA@0.126591, 0 0 0 0 ENSG00000255471.1 ENST00000533672.1 chr11:86632964-86636079 2 237 2876 intronic -0.25 0 0,0,1 0 0,0,0 0 0 68.515 0 27.4874826147427 59.445 0 30.5173852573018 62.746 0 0 cat,chimp,dog,elephant,horse,human,macaque,marmoset,orangutan, antisense antisense A549@0.0436445,AG04450@0.181386,BJ@0.63265,GM12878@0,H1HESC@0.143535,HELAS3@0.134667,HEPG2@0.338168,HMEC@0.003542,HSMM@0.030399,HUVEC@1.05068,K562@0.277855,MCF7@0.083868,NHEK@0.010514,NHLF@0.217625,SKNSHRA@0.126591, 0 0 0 0 ENSG00000246523.2 ENST00000499504.2 chr11:86666754-86712001 3 1175 44068 intergenic -3.90 0 1,1,1 1 0,0,0 98.6663829787234 31.7538122900971 255.024 59.663829787234 31.671825360806 300.198 52.531914893617 32.4980030861396 258.693 0 0 cat,chimp,cow,elephant,guinea_pig,horse,human,macaque,marmoset,mouse,orangutan,pig,rat, lincRNA processed_transcript A549@0.105104,AG04450@0.0666635,BJ@0.168579,GM12878@0.002824,H1HESC@0.148838,HELAS3@0.436923,HEPG2@0.511359,HMEC@0.035408,HSMM@0.0580185,HUVEC@0.23968,K562@0.157268,MCF7@0.0939585,NHEK@0.0131747,NHLF@0.138294,SKNSHRA@0.173894, 0 0 0 0 ENSG00000246523.2 ENST00000531827.1 chr11:86667133-86711532 3 827 43568 intergenic -0.69 0 0,1,0 0 0,0,0 172.191051995163 30.4973145427837 83.044 131.697702539299 29.6877524788836 149.824 132.916565900846 30.5414524421594 123.847 0 0 chimp,cow,elephant,guinea_pig,horse,human,macaque,marmoset,mouse,orangutan,pig,rabbit, lincRNA processed_transcript A549@0.105104,AG04450@0.0666635,BJ@0.168579,GM12878@0.002824,H1HESC@0.148838,HELAS3@0.436923,HEPG2@0.511359,HMEC@0.035408,HSMM@0.0580185,HUVEC@0.23968,K562@0.157268,MCF7@0.0939585,NHEK@0.0131747,NHLF@0.138294,SKNSHRA@0.173894, 0 0 0 0 ENSG00000255183.1 ENST00000532606.1 chr11:87429246-87430303 2 677 378 intergenic -5.58 0 0,1,0 0 0,0,0 114.357459379616 0 54.604 100.887740029542 0 41.672 96.9350073855244 0 40.907 0 0 cat,chimp,cow,dog,guinea_pig,horse,human,macaque,marmoset,orangutan,panda,pig,rabbit,rat, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0.034289,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0.027551,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000255516.1 ENST00000532849.1 chr11:87783274-87795278 3 569 11431 intergenic -4.93 0 0,0,0 0 0,0,0 0 0.885311871227364 0 0 5.57326568104278 0 0 7.55095792144169 0 0 0 cat,chimp,dog,elephant,guinea_pig,human,macaque,marmoset,orangutan,panda,rabbit, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0.01088,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000255102.1 ENST00000531454.1 chr11:87794942-87831315 2 486 35885 intergenic 0 0 0,1,0 0 0,0,0 0 0.782276717291347 0 0 0.307147833356556 0 0 0.339194649575031 0 0 0 cat,chimp,dog,elephant,guinea_pig,horse,human,macaque,marmoset,orangutan,pig,rabbit, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0.0119855,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0.209584,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000255241.1 ENST00000528458.1 chr11:87831759-87849003 3 249 16991 intronic 0 0 0,0,0 0 0,0,0 0 5.55093873227003 0 0 7.42310635042081 0 0 8.85321640868695 0 1 1 chimp,human,macaque,marmoset,orangutan, antisense antisense A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000255082.1 ENST00000526448.1 chr11:88237744-88257222 6 4815 14653 exonic -1.01 0 0,0,1 0 0,0,0 359.686812045691 12.912099911281 48.28 274.209968847352 13.7925339520917 46.635 253.569678089304 15.7095475329284 31.392 0 0 cat,chimp,dog,elephant,guinea_pig,horse,human,macaque,marmoset,orangutan,panda,pig,rabbit, antisense antisense A549@0,AG04450@0.000669,BJ@0,GM12878@0,H1HESC@0.109563,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0.0006175,K562@0,MCF7@0,NHEK@0,NHLF@0.0008095,SKNSHRA@0, 0 0 0 0 ENSG00000255082.1 ENST00000531994.1 chr11:88244916-88245529 2 240 371 intronic -2.03 0 0,1,1 0 0,0,0 0 0 0 0 12.6954177897574 0 0 12.8167115902965 0 0 0 cat,chimp,dog,human,marmoset,orangutan,panda,pig,rabbit,rat, antisense antisense A549@0,AG04450@0.000669,BJ@0,GM12878@0,H1HESC@0.109563,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0.0006175,K562@0,MCF7@0,NHEK@0,NHLF@0.0008095,SKNSHRA@0, 0 0 0 0 ENSG00000254971.1 ENST00000527332.1 chr11:89487150-89488121 2 484 485 intergenic -6.06 0 0,0,0 0 0,0,0 0 0 0 0 0 0 0 0 30.147 1 1 chimp,human,macaque,marmoset,orangutan, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000255187.1 ENST00000526509.1 chr11:90891251-90900462 3 501 8706 intergenic -2.09 0 0,0,0 0 0,0,0 0 10.8545830461751 0 0 7.46083161038364 0 0 12.4059269469331 0 0 0 cat,chimp,cow,dog,elephant,guinea_pig,horse,human,macaque,marmoset,orangutan,panda,pig,rabbit, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000254705.1 ENST00000531176.1 chr11:92133357-92141342 5 770 7207 intronic 2.43 0 0,0,0 0 0,0,0 0 19.8673511863466 25.259 10.4883116883117 27.7487165256001 113.695 19.5779220779221 27.164423477175 79.491 0 0 chimp,elephant,guinea_pig,horse,human,macaque,marmoset,orangutan,pig,rabbit,rat, antisense antisense A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0.007965,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000255506.1 ENST00000529884.1 chr11:92481898-92500033 2 581 17552 intronic -0.01 0 0,0,0 0 0,0,0 0 39.3878760255242 0 29.8313253012048 47.4254785779399 0 30.1480206540447 45.8984731084777 0 0 0 cat,chimp,cow,dog,elephant,guinea_pig,horse,human,macaque,marmoset,mouse,orangutan,panda,pig,rabbit,rat, antisense antisense A549@0,AG04450@0,BJ@0,GM12878@0.013831,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000254874.1 ENST00000532770.1 chr11:92698963-92699769 2 264 540 intergenic 0 0 0,0,0 0 0,0,0 0 0 0 0 0 0 0 0 0 0 0 chimp,dog,elephant,horse,human,macaque,marmoset,orangutan, lincRNA lincRNA A549@0.0163205,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000255233.1 ENST00000531846.1 chr11:92973299-92974334 2 398 635 intergenic -7.56 0 0,0,0 0 0,0,0 0 0 0 0 0 0 16.4849246231156 0 0 0 0 chimp,cow,dog,horse,human,macaque,marmoset,orangutan, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000254911.1 ENST00000530422.1 chr11:93454679-93455031 1 352 0 intronic -2.25 0 0,0,0 0 0,0,0 184.585227272727 0 0 161.3125 0 2.04 182.264204545455 0 4.152 0 0 cat,chimp,cow,dog,elephant,guinea_pig,horse,human,macaque,marmoset,mouse,opossum,orangutan,panda,pig,rabbit,rat, antisense non_coding A549@16.9413,AG04450@24.2351,BJ@18.472,GM12878@32.5837,H1HESC@6.07583,HELAS3@13.3006,HEPG2@10.2901,HMEC@8.87666,HSMM@1.28088,HUVEC@14.0867,K562@38.915,MCF7@7.46237,NHEK@8.85774,NHLF@1.76589,SKNSHRA@32.4327, 0 0 0 0 ENSG00000250519.2 ENST00000506309.2 chr11:93971316-94012195 3 543 40332 intergenic 0.85 0 0,0,0 0 0,0,0 0 0 0 0 1.00525637211147 0 0 1.43035306952296 0 0 0 cat,chimp,horse,human,macaque,marmoset,orangutan,panda,rabbit, lincRNA lincRNA A549@0.0411945,AG04450@0.210855,BJ@0.0213015,GM12878@0.0335565,H1HESC@0.438686,HELAS3@0.016265,HEPG2@0,HMEC@0.007184,HSMM@0.004175,HUVEC@0,K562@0.0044985,MCF7@0.0940635,NHEK@0.620849,NHLF@0.0440445,SKNSHRA@0.0528555, 0 0 0 0 ENSG00000250519.2 ENST00000515097.2 chr11:93971316-94012372 2 568 40486 intergenic -1.45 0 0,0,0 0 0,0,0 0 0 0 0 1.00143259398311 0 0 1.42491231536828 0 0 0 chimp,dog,horse,human,macaque,marmoset,orangutan,panda, lincRNA lincRNA A549@0.0411945,AG04450@0.210855,BJ@0.0213015,GM12878@0.0335565,H1HESC@0.438686,HELAS3@0.016265,HEPG2@0,HMEC@0.007184,HSMM@0.004175,HUVEC@0,K562@0.0044985,MCF7@0.0940635,NHEK@0.620849,NHLF@0.0440445,SKNSHRA@0.0528555, 0 0 0 0 ENSG00000255893.1 ENST00000541092.1 chr11:94206074-94206736 2 579 81 intronic -6.25 0 0,1,1 0 0,0,0 0 0 0 0 0 0 7.9740932642487 0 0 0 0 cat,chimp,cow,dog,horse,human,macaque,marmoset,orangutan,panda,pig, antisense antisense A549@3.28792,AG04450@0.576148,BJ@0.650774,GM12878@5.20191,H1HESC@1.015,HELAS3@2.34049,HEPG2@2.80023,HMEC@2.79874,HSMM@0.409672,HUVEC@2.17977,K562@3.68109,MCF7@1.19658,NHEK@0.69163,NHLF@0.080184,SKNSHRA@0.443247, 0 0 0 0 ENSG00000257057.1 ENST00000542198.1 chr11:94245747-94265289 4 548 18988 intergenic 1.40 1 0,1,0 0 0,0,1 141.136861313869 2.73082999789341 0 193.304744525547 3.93306298714978 7.5 212.445255474453 4.42921845376027 10.594 0 0 cat,chimp,cow,dog,elephant,guinea_pig,horse,human,macaque,marmoset,mouse,opossum,orangutan,panda,pig,rabbit, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0.003642,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000255929.1 ENST00000536540.1 chr11:94278496-94473435 5 949 193982 exonic 7.21 0 0,1,1 0 0,0,0 139.640674394099 3.37270468393975 0 89.2434141201265 7.09895763524451 48.275 114.929399367756 9.40780587889596 42.509 0 0 cat,chimp,horse,human,marmoset,orangutan,platypus,rabbit, antisense antisense A549@0,AG04450@0.0070285,BJ@0.0088025,GM12878@0.0076975,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0.011799, 0 0 0 0 ENSG00000255929.1 ENST00000537874.1 chr11:94279357-94473521 4 567 193591 exonic 1.97 0 0,1,1 0 0,0,0 0 3.37951660975975 0 2.10758377425044 7.11329555609506 48.275 2.336860670194 9.42680703131861 42.509 0 0 cat,chimp,elephant,horse,human,macaque,marmoset,orangutan,rabbit, antisense antisense A549@0,AG04450@0.0070285,BJ@0.0088025,GM12878@0.0076975,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0.011799, 0 0 0 0 ENSG00000233536.2 ENST00000438416.2 chr11:94371204-94373999 6 706 2079 intergenic 3.59 0 0,0,0 0 0,0,0 0 0 0 0 6.77633477633478 0 0 10.5416065416065 0 0 1 chimp,human,macaque,orangutan, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0.0029135,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0.046535,MCF7@0,NHEK@0.0375073,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000255666.1 ENST00000544019.1 chr11:94375073-94384794 7 637 9072 intergenic 2.76 0 0,0,0 0 0,0,0 0 3.88503086419753 0 0 0 0 0 0 0 0 0 chimp,horse,human,macaque,orangutan, lincRNA lincRNA A549@0,AG04450@0.0198995,BJ@0.00501,GM12878@0,H1HESC@1.59747,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0.128118,MCF7@0,NHEK@0.179713,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000255666.1 ENST00000541293.1 chr11:94375096-94381740 3 571 6069 intergenic 3.01 0 0,0,0 0 0,0,0 61.7250437828371 0 0 0 0 0 0 0 0 0 0 chimp,dog,horse,human,macaque,orangutan,pig, lincRNA lincRNA A549@0,AG04450@0.0198995,BJ@0.00501,GM12878@0,H1HESC@1.59747,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0.128118,MCF7@0,NHEK@0.179713,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000255666.1 ENST00000540151.1 chr11:94380610-94384797 4 479 3702 intergenic 3.01 0 0,0,0 0 0,0,0 0 9.52052944354403 0 0 0 0 0 0 0 0 1 chimp,human,macaque,orangutan, lincRNA lincRNA A549@0,AG04450@0.0198995,BJ@0.00501,GM12878@0,H1HESC@1.59747,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0.128118,MCF7@0,NHEK@0.179713,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000255666.1 ENST00000542479.1 chr11:94380645-94384795 5 527 3615 intergenic 2.27 0 0,0,0 0 0,0,0 0 9.74965421853389 0 0 0 0 0 0 0 0 1 chimp,human,macaque,orangutan, lincRNA lincRNA A549@0,AG04450@0.0198995,BJ@0.00501,GM12878@0,H1HESC@1.59747,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0.128118,MCF7@0,NHEK@0.179713,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000256469.1 ENST00000545958.1 chr11:94607217-94658686 2 591 50876 exonic 0.21 0 0,1,0 0 0,0,0 0 2.16149068322981 0 0 2.51375894331315 0 0 16.4069305763032 0 0 0 chimp,cow,elephant,guinea_pig,horse,human,macaque,marmoset,orangutan, antisense antisense A549@0,AG04450@0.0108755,BJ@0,GM12878@0,H1HESC@0,HELAS3@0.0044755,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0.0090065,K562@0,MCF7@0,NHEK@0.00215267,NHLF@0,SKNSHRA@0.003826, 0 0 0 0 ENSG00000150316.7 ENST00000545018.1 chr11:94695787-94706776 7 1568 9409 intergenic 8.17 1 1,1,1 1 0,1,1 187.820790816327 2.76458709745988 185.15 273.998724489796 3.03050271017111 211.787 260.419005102041 10.0381549580189 202.197 0 0 chimp,cow,dog,guinea_pig,horse,human,macaque,marmoset,opossum,orangutan,panda,pig,rabbit,rat, antisense antisense A549@8.36569,AG04450@13.9456,BJ@9.79578,GM12878@17.9421,H1HESC@3.46504,HELAS3@15.706,HEPG2@7.40555,HMEC@6.1085,HSMM@10.4188,HUVEC@3.91073,K562@19.9753,MCF7@7.32063,NHEK@10.4125,NHLF@11.9207,SKNSHRA@8.60952, 0 0 0 0 ENSG00000150316.7 ENST00000279839.6 chr11:94695793-94706776 8 1559 9410 intergenic 8.17 1 1,1,1 1 0,1,1 188.148813341886 2.80605738575983 185.15 274.427838357922 3.09383634431456 211.787 260.783194355356 10.1 202.197 0 0 chimp,cow,dog,guinea_pig,horse,human,macaque,marmoset,opossum,orangutan,panda,pig,rabbit,rat, antisense retained_intron A549@8.36569,AG04450@13.9456,BJ@9.79578,GM12878@17.9421,H1HESC@3.46504,HELAS3@15.706,HEPG2@7.40555,HMEC@6.1085,HSMM@10.4188,HUVEC@3.91073,K562@19.9753,MCF7@7.32063,NHEK@10.4125,NHLF@11.9207,SKNSHRA@8.60952, 0 0 0 0 ENSG00000150316.7 ENST00000540722.1 chr11:94696507-94703662 3 798 6353 intergenic 3.74 1 0,0,1 0 0,1,1 210.75313283208 0.890602864788289 82.138 298.510025062657 2.31087675114119 99.602 277.137844611529 12.8498347237526 101.39 0 0 cat,chimp,cow,dog,elephant,guinea_pig,horse,human,macaque,marmoset,mouse,opossum,orangutan,panda,pig,rabbit,rat, antisense antisense A549@8.36569,AG04450@13.9456,BJ@9.79578,GM12878@17.9421,H1HESC@3.46504,HELAS3@15.706,HEPG2@7.40555,HMEC@6.1085,HSMM@10.4188,HUVEC@3.91073,K562@19.9753,MCF7@7.32063,NHEK@10.4125,NHLF@11.9207,SKNSHRA@8.60952, 0 0 0 0 ENSG00000150316.7 ENST00000545971.1 chr11:94696533-94706750 6 1106 9101 intergenic 8.17 1 1,1,1 1 0,1,1 258.035262206148 2.2354686298209 185.15 363.332730560579 2.92912866717943 216.981 354.597649186257 10.1721788814416 207.433 0 0 cat,chimp,cow,dog,elephant,horse,human,macaque,marmoset,mouse,orangutan,panda,rabbit,rat, antisense retained_intron A549@8.36569,AG04450@13.9456,BJ@9.79578,GM12878@17.9421,H1HESC@3.46504,HELAS3@15.706,HEPG2@7.40555,HMEC@6.1085,HSMM@10.4188,HUVEC@3.91073,K562@19.9753,MCF7@7.32063,NHEK@10.4125,NHLF@11.9207,SKNSHRA@8.60952, 0 0 0 0 ENSG00000150316.7 ENST00000539856.1 chr11:94703654-94706736 4 899 2177 intergenic 8.17 0 0,1,0 1 0,1,1 144.967741935484 5.87689480937069 185.15 197.843159065628 3.61966008268259 217.459 196.700778642937 3.3146531924667 207.935 0 0 cat,chimp,cow,dog,guinea_pig,horse,human,macaque,marmoset,orangutan,panda,pig,rabbit, antisense retained_intron A549@8.36569,AG04450@13.9456,BJ@9.79578,GM12878@17.9421,H1HESC@3.46504,HELAS3@15.706,HEPG2@7.40555,HMEC@6.1085,HSMM@10.4188,HUVEC@3.91073,K562@19.9753,MCF7@7.32063,NHEK@10.4125,NHLF@11.9207,SKNSHRA@8.60952, 0 0 0 0 ENSG00000150316.7 ENST00000542907.1 chr11:94703918-94706708 4 832 1952 intergenic 1.71 0 0,1,0 1 0,1,1 156.641826923077 6.55430327868852 185.15 211.972355769231 3.38370901639344 220.473 211.064903846154 3.01793032786885 210.739 0 0 chimp,cow,horse,human,macaque,marmoset,orangutan,panda,pig,rabbit, antisense retained_intron A549@8.36569,AG04450@13.9456,BJ@9.79578,GM12878@17.9421,H1HESC@3.46504,HELAS3@15.706,HEPG2@7.40555,HMEC@6.1085,HSMM@10.4188,HUVEC@3.91073,K562@19.9753,MCF7@7.32063,NHEK@10.4125,NHLF@11.9207,SKNSHRA@8.60952, 0 0 0 0 ENSG00000150316.7 ENST00000542165.1 chr11:94704128-94706710 3 918 1660 intergenic 1.71 0 1,1,1 1 0,1,1 148.899782135076 4.2933734939759 185.15 193.796296296296 2.86084337349398 220.473 192.618736383442 2.4210843373494 210.739 0 0 chimp,cow,dog,elephant,horse,human,macaque,marmoset,orangutan,panda,rabbit,rat, antisense retained_intron A549@8.36569,AG04450@13.9456,BJ@9.79578,GM12878@17.9421,H1HESC@3.46504,HELAS3@15.706,HEPG2@7.40555,HMEC@6.1085,HSMM@10.4188,HUVEC@3.91073,K562@19.9753,MCF7@7.32063,NHEK@10.4125,NHLF@11.9207,SKNSHRA@8.60952, 0 0 0 0 ENSG00000245552.2 ENST00000501356.1 chr11:94883703-94892312 3 1923 6682 intergenic 11.15 0 0,1,0 0 0,0,0 0 0 0 2.56370254810192 5.79257707273271 0 1.60686427457098 7.00972762645914 0 0 0 chimp,horse,human,macaque,marmoset,orangutan, lincRNA non_coding A549@0.163013,AG04450@0.0771745,BJ@0.0649175,GM12878@1.24354,H1HESC@0.849681,HELAS3@0.0341795,HEPG2@0.053275,HMEC@0.159196,HSMM@0.028104,HUVEC@0.382177,K562@0.033218,MCF7@0.192488,NHEK@0.259357,NHLF@0.0735345,SKNSHRA@0.389417, 0 0 0 0 ENSG00000245552.2 ENST00000534864.1 chr11:94884217-94938044 3 698 53125 intronic 5.47 0 0,0,0 0 0,0,0 0 37.6605741176471 0 2.63610315186246 47.1383529411764 0 0 54.1270588235294 0 0 0 chimp,elephant,guinea_pig,horse,human,macaque,marmoset,orangutan,panda,pig, lincRNA non_coding A549@0.163013,AG04450@0.0771745,BJ@0.0649175,GM12878@1.24354,H1HESC@0.849681,HELAS3@0.0341795,HEPG2@0.053275,HMEC@0.159196,HSMM@0.028104,HUVEC@0.382177,K562@0.033218,MCF7@0.192488,NHEK@0.259357,NHLF@0.0735345,SKNSHRA@0.389417, 0 0 0 0 ENSG00000245552.2 ENST00000545216.1 chr11:94884503-94891221 2 592 6124 intergenic 0 0 0,0,1 0 0,0,0 0 0 0 3.10810810810811 2.54245591116917 0 0 2.81041802743305 0 0 0 chimp,cow,elephant,guinea_pig,horse,human,macaque,marmoset,orangutan,panda, lincRNA non_coding A549@0.163013,AG04450@0.0771745,BJ@0.0649175,GM12878@1.24354,H1HESC@0.849681,HELAS3@0.0341795,HEPG2@0.053275,HMEC@0.159196,HSMM@0.028104,HUVEC@0.382177,K562@0.033218,MCF7@0.192488,NHEK@0.259357,NHLF@0.0735345,SKNSHRA@0.389417, 0 0 0 0 ENSG00000245552.2 ENST00000534891.1 chr11:94884910-94966854 4 773 81165 encompassing -17.40 0 0,1,1 1 0,0,0 30.3221216041397 34.1154068872051 0 11.9974126778784 42.886009979671 3.09 14.6170763260026 48.4513645044046 3.09 0 0 cat,chimp,dog,horse,human,macaque,marmoset,panda,pig,rabbit, lincRNA non_coding A549@0.163013,AG04450@0.0771745,BJ@0.0649175,GM12878@1.24354,H1HESC@0.849681,HELAS3@0.0341795,HEPG2@0.053275,HMEC@0.159196,HSMM@0.028104,HUVEC@0.382177,K562@0.033218,MCF7@0.192488,NHEK@0.259357,NHLF@0.0735345,SKNSHRA@0.389417, 0 0 0 0 ENSG00000245552.2 ENST00000536683.1 chr11:94963350-94967093 6 1479 2254 exonic 3.25 0 0,0,0 0 0,0,0 47.3144016227181 127.042590949423 305.527 109.05814739689 138.914818101154 310.281 109.621365787694 145.19387755102 326.898 0 0 cat,chimp,cow,dog,human,macaque,marmoset,orangutan,panda,pig,rabbit, lincRNA antisense A549@0.163013,AG04450@0.0771745,BJ@0.0649175,GM12878@1.24354,H1HESC@0.849681,HELAS3@0.0341795,HEPG2@0.053275,HMEC@0.159196,HSMM@0.028104,HUVEC@0.382177,K562@0.033218,MCF7@0.192488,NHEK@0.259357,NHLF@0.0735345,SKNSHRA@0.389417, 0 0 0 0 ENSG00000245552.2 ENST00000543150.1 chr11:94963560-94966907 5 1562 1777 exonic 3.25 0 0,0,0 0 0,0,0 38.067861715749 161.144625773776 209.332 108.720870678617 164.687113111986 215.435 110.790653008963 170.58863252673 231.33 0 0 cat,chimp,cow,horse,human,macaque,marmoset,orangutan,panda,pig, lincRNA antisense A549@0.163013,AG04450@0.0771745,BJ@0.0649175,GM12878@1.24354,H1HESC@0.849681,HELAS3@0.0341795,HEPG2@0.053275,HMEC@0.159196,HSMM@0.028104,HUVEC@0.382177,K562@0.033218,MCF7@0.192488,NHEK@0.259357,NHLF@0.0735345,SKNSHRA@0.389417, 0 0 0 0 ENSG00000245552.2 ENST00000540692.1 chr11:94964897-94966510 2 1199 412 exonic -2.61 0 0,0,1 0 0,0,0 162.448707256047 66.8932038834951 67.438 138.724770642202 114.157766990291 241.177 145.730608840701 102.276699029126 250.419 0 0 cat,chimp,cow,dog,elephant,guinea_pig,horse,human,macaque,marmoset,orangutan,panda,pig,rabbit, lincRNA antisense A549@0.163013,AG04450@0.0771745,BJ@0.0649175,GM12878@1.24354,H1HESC@0.849681,HELAS3@0.0341795,HEPG2@0.053275,HMEC@0.159196,HSMM@0.028104,HUVEC@0.382177,K562@0.033218,MCF7@0.192488,NHEK@0.259357,NHLF@0.0735345,SKNSHRA@0.389417, 0 0 0 0 ENSG00000245552.2 ENST00000543573.1 chr11:94965735-94967268 2 753 778 intergenic -13.03 0 0,1,0 0 0,0,0 33.2390438247012 293.469151670951 25.705 17.1354581673307 198.818766066838 69.479 24.9322709163347 201.902313624679 67.147 0 0 cat,chimp,cow,dog,elephant,horse,human,macaque,marmoset,orangutan,panda,rabbit, lincRNA non_coding A549@0.163013,AG04450@0.0771745,BJ@0.0649175,GM12878@1.24354,H1HESC@0.849681,HELAS3@0.0341795,HEPG2@0.053275,HMEC@0.159196,HSMM@0.028104,HUVEC@0.382177,K562@0.033218,MCF7@0.192488,NHEK@0.259357,NHLF@0.0735345,SKNSHRA@0.389417, 0 0 0 0 ENSG00000250390.2 ENST00000511947.2 chr11:95215570-95230717 3 567 14576 intergenic -0.22 0 0,0,0 0 0,0,0 0 3.68304061470911 0 0 13.6087403951701 4.733 0 15.3155186608123 6.948 0 0 human, lincRNA lincRNA A549@0,AG04450@0,BJ@0.0239085,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0.006356,NHLF@0,SKNSHRA@0, 142 2 0 0 ENSG00000255605.1 ENST00000545912.1 chr11:95431250-95433787 3 503 2030 intergenic 2.80 0 0,0,0 0 0,0,0 22.2107355864811 52.3684729064039 4.807 27.5904572564612 66.0812807881773 0 32.6640159045726 72.3581280788177 1.701 0 0 cat,chimp,dog,guinea_pig,horse,human,macaque,marmoset,orangutan,panda,pig, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0.024276,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0.0282513,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000255679.1 ENST00000511243.2 chr11:96180296-96239990 4 422 59266 intergenic 2.49 0 0,1,0 0 0,0,0 0 5.05146289609557 0 0 6.88738905949448 0 0 8.38838457125502 0 1 1 chimp,human,macaque,marmoset,orangutan, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0.018562,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000256684.1 ENST00000543403.1 chr11:96241589-96247912 4 400 5917 intergenic 0.33 0 0,0,0 0 0,0,0 1.725 3.69477775899949 0 90.76 12.8945411526111 0 93.785 19.308602332263 0 0 0 cat,chimp,cow,dog,elephant,guinea_pig,horse,human,macaque,marmoset,mouse,orangutan,panda,pig,rabbit,rat, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000254587.1 ENST00000527528.1 chr11:96461317-96584822 4 1643 121856 intergenic 3.09 0 0,0,0 0 0,0,0 48.0706025562994 9.18739331670168 0 31.6019476567255 11.9377051601891 0 33.4181375532562 14.7331768644958 0 0 0 chimp,cow,elephant,guinea_pig,human,macaque,marmoset,mouse,orangutan,pig,rabbit, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0.0856745,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0.0045435,HUVEC@0,K562@0,MCF7@0,NHEK@0.005152,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000255039.1 ENST00000529088.1 chr11:97093644-97130987 3 731 36608 intergenic 1.09 0 0,0,0 0 0,0,0 0 6.96028190559441 0 0 11.3344350961538 0 0 13.6050043706294 0 0 0 horse,human,macaque,marmoset, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000255502.1 ENST00000526385.1 chr11:97749781-97813762 4 542 63433 intergenic -1.26 0 0,0,0 0 0,0,0 0 6.84735074803336 0 0 6.01587501773525 0 0 8.17944918260212 0 0 0 chimp,dog,guinea_pig,horse,human,macaque,marmoset,orangutan,panda,pig,rabbit, processed_transcript processed_transcript A549@0,AG04450@0.0043135,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0.005317,HUVEC@0,K562@0.004992,MCF7@0,NHEK@0.00164933,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000255502.1 ENST00000527281.1 chr11:97789423-97813762 3 771 23564 intergenic -1.95 0 0,0,0 0 0,0,0 0 1.07350195213037 0 0 1.35185028008827 0 0 2.72695637413003 0 0 0 chimp,cow,horse,human,macaque,marmoset,orangutan, processed_transcript processed_transcript A549@0,AG04450@0.0043135,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0.005317,HUVEC@0,K562@0.004992,MCF7@0,NHEK@0.00164933,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000254599.1 ENST00000532109.1 chr11:98547121-98554465 3 432 6908 intergenic -3.45 0 0,0,0 0 0,0,0 0 13.6042269832079 0 0 13.8896931094383 0 0 14.0295309785756 0 0 1 chimp,human,macaque,orangutan, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0.0505285,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000254830.1 ENST00000527345.1 chr11:98809642-98815809 2 378 5787 intergenic 0.24 0 0,0,0 0 0,0,0 0 1.66130983238293 0 0 0 0 0 0 0 1 1 chimp,human,macaque,marmoset,orangutan, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000248027.1 ENST00000501397.1 chr11:100554893-100558686 2 1863 1928 exonic 2.90 0 0,1,0 0 0,0,0 16.4868491680086 18.844398340249 16.416 93.9168008588298 49.5720954356846 25.584 98.9978529253892 47.8641078838174 26.592 0 0 chimp,elephant,human,macaque,marmoset,orangutan,pig,rabbit, lincRNA processed_transcript A549@0.189402,AG04450@0.0534915,BJ@0,GM12878@0.0147305,H1HESC@0.274053,HELAS3@0.166968,HEPG2@0.0695515,HMEC@0,HSMM@0.112948,HUVEC@0.041151,K562@0.143405,MCF7@0.155504,NHEK@0.031784,NHLF@0.050928,SKNSHRA@0, 0 0 0 0 ENSG00000254422.1 ENST00000526310.1 chr11:102100582-102101653 2 626 443 exonic -2.61 0 0,1,1 0 0,0,0 258.846645367412 125.972911963883 166.529 326.980830670926 228.584650112867 232.055 381.958466453674 289.3769751693 263.463 0 0 cat,chimp,cow,dog,elephant,guinea_pig,horse,human,macaque,marmoset,mouse,opossum,orangutan,panda,platypus,rabbit, antisense antisense A549@0.0043985,AG04450@0.0148195,BJ@0.015248,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0.074161,HSMM@0,HUVEC@0,K562@0,MCF7@0.0032015,NHEK@0,NHLF@0,SKNSHRA@0.003613, 0 0 0 0 ENSG00000255337.1 ENST00000528717.1 chr11:102323650-102332739 2 690 8397 exonic 8.32 0 1,1,1 1 0,0,0 0 4.04453971656544 0 3.11739130434783 0.505537692032869 15.208 9.26666666666667 1.62319876146243 16.523 0 0 chimp,horse,human,macaque,marmoset,pig,rabbit, antisense antisense A549@0.151983,AG04450@0.0438025,BJ@0.0455825,GM12878@0.168359,H1HESC@0.046123,HELAS3@0.133882,HEPG2@0.333348,HMEC@0.04142,HSMM@0.0194445,HUVEC@0.018355,K562@0.070338,MCF7@0.129547,NHEK@0.037748,NHLF@0.042013,SKNSHRA@0.160486, 0 0 0 0 ENSG00000256916.1 ENST00000544115.1 chr11:102477647-102478853 3 740 462 intronic 0.04 0 0,1,0 0 0,0,0 0 0 21.465 0 0 41.953 0 0 42.564 0 0 chimp,horse,human,macaque,marmoset,orangutan,panda, antisense antisense A549@0.0136175,AG04450@0,BJ@0,GM12878@0.0295135,H1HESC@0,HELAS3@0,HEPG2@0.0039435,HMEC@0.005511,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0.001718,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000256916.1 ENST00000542119.1 chr11:102478098-102498801 4 739 19958 intronic -2.44 1 0,0,0 0 0,0,0 0 22.0689948892675 21.465 1.86738836265223 25.1311253632629 41.953 1.97293640054127 23.6815813207736 42.564 0 0 chimp,cow,horse,human,macaque,marmoset,orangutan,pig, antisense antisense A549@0.0136175,AG04450@0,BJ@0,GM12878@0.0295135,H1HESC@0,HELAS3@0,HEPG2@0.0039435,HMEC@0.005511,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0.001718,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000110347.7 ENST00000532855.1 chr11:102733467-102745764 10 1863 10416 intergenic 20.14 1 0,0,1 0 0,1,1 33.8132045088567 1.93001152073733 0 111.396135265701 2.8366935483871 10.038 143.590445517982 3.46294162826421 12.417 0 0 chimp,cow,dog,elephant,guinea_pig,horse,human,macaque,marmoset,mouse,orangutan,panda,pig,rabbit,rat, lincRNA lincRNA A549@0.002962,AG04450@0.0036665,BJ@0.02928,GM12878@0.017822,H1HESC@0,HELAS3@0.006099,HEPG2@0,HMEC@0.008745,HSMM@0.002326,HUVEC@0,K562@0,MCF7@0.001078,NHEK@0.0251813,NHLF@0.0322235,SKNSHRA@0.34097, 0 0 0 0 ENSG00000110347.7 ENST00000326227.5 chr11:102733476-102745764 11 1854 10414 intergenic 14.29 1 0,0,1 0 0,1,1 33.9773462783171 1.93038217783753 0 111.037216828479 2.99740733627809 10.038 159.858683926645 3.68014211638179 12.417 0 0 chimp,cow,dog,elephant,guinea_pig,horse,human,macaque,marmoset,mouse,orangutan,panda,pig,rabbit,rat, lincRNA lincRNA A549@0.002962,AG04450@0.0036665,BJ@0.02928,GM12878@0.017822,H1HESC@0,HELAS3@0.006099,HEPG2@0,HMEC@0.008745,HSMM@0.002326,HUVEC@0,K562@0,MCF7@0.001078,NHEK@0.0251813,NHLF@0.0322235,SKNSHRA@0.34097, 0 0 0 0 ENSG00000254987.1 ENST00000533459.1 chr11:103546722-103765999 5 557 218712 intergenic 1.81 0 0,0,0 0 0,0,0 0 4.23687772047258 0 0 7.34618127949084 0 0 8.34883316873332 0 0 0 chimp,horse,human,macaque,marmoset,orangutan, lincRNA lincRNA A549@0.0218315,AG04450@0.0437005,BJ@0.004306,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0.004056,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0.065325, 0 0 0 0 ENSG00000255548.1 ENST00000527804.1 chr11:103816276-103817274 2 545 451 intronic 0 0 0,0,0 0 0,0,0 0 0 5.382 0 0 18.092 0 0 13.169 0 0 chimp,elephant,guinea_pig,horse,human,macaque,marmoset,orangutan,pig,rabbit, antisense antisense A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000256422.1 ENST00000536529.1 chr11:104316596-104480024 5 647 162773 intergenic 0.59 1 0,0,0 0 0,0,0 0 3.88299656576951 314.838 0 3.6679609026067 225.015 0 4.80209862815086 187.402 1 1 chimp,human,macaque,marmoset,orangutan, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0.0035585,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0.003347,SKNSHRA@0, 0 0 0 0 ENSG00000256422.1 ENST00000538641.1 chr11:104410659-104480049 4 538 68846 intergenic 1.13 0 0,0,0 0 0,0,0 0 2.09012869302501 314.838 0 2.64989977631235 225.015 0 3.73477035702873 187.402 1 1 chimp,human,macaque,marmoset,orangutan, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0.0035585,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0.003347,SKNSHRA@0, 0 0 0 0 ENSG00000256422.1 ENST00000545630.1 chr11:104439258-104480030 4 579 40187 intergenic -2.27 0 0,0,0 0 0,0,0 0 1.01102346529972 314.838 0 0.868564461144151 225.015 0 1.21825465946699 187.402 0 0 cat,chimp,dog,horse,human,macaque,marmoset,orangutan,panda,pig,rabbit, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0.0035585,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0.003347,SKNSHRA@0, 0 0 0 0 ENSG00000254998.1 ENST00000528811.1 chr11:105028654-105402424 5 440 373322 intergenic -3.82 0 0,0,0 0 0,0,0 28.2454545454545 2.08416862654759 0 0 3.32646080327438 0 0 4.40567392224407 0 0 0 horse,human,macaque,marmoset,orangutan, processed_transcript processed_transcript A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0.133168,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000254433.1 ENST00000532422.1 chr11:105956717-105972649 5 821 15103 exonic 4.58 0 0,0,0 0 0,0,0 23.1668696711328 12.1926107395882 0 39.4640682095006 26.0883268224856 0 39.9756394640682 24.7593855525392 0 0 0 chimp,cow,guinea_pig,horse,human,macaque,orangutan, antisense antisense A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0.005917,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000254433.1 ENST00000527594.1 chr11:105967274-105972702 2 690 4736 exonic 0.99 0 0,0,0 0 0,0,0 41.9173913043478 3.39949324324324 0 143.378260869565 14.4932432432432 0 124.982608695652 15.1389358108108 0 0 0 chimp,cow,dog,elephant,horse,human,macaque,marmoset,orangutan,panda,pig,rabbit,rat, antisense antisense A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0.005917,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000254580.1 ENST00000524966.1 chr11:105983186-106002843 3 406 19247 intergenic -3.44 0 0,0,0 0 0,0,0 0 7.40769990128332 0 0 8.17161116018081 0 7.36945812807882 10.482464799709 0 0 0 cat,chimp,dog,elephant,horse,human,macaque,marmoset,orangutan,panda, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000255467.1 ENST00000525548.1 chr11:107975801-107992411 4 960 15644 exonic -1.75 0 0,1,0 0 0,0,0 86.0625 41.2723088724111 0.66 73.89375 37.8717080030683 0 66.4916666666667 42.0292124776272 0 0 1 chimp,human,orangutan, antisense antisense A549@0.0190915,AG04450@0.004886,BJ@0.006714,GM12878@0.0146105,H1HESC@0.0102675,HELAS3@0.005506,HEPG2@0.0180425,HMEC@0,HSMM@0,HUVEC@0.0138505,K562@0.0076445,MCF7@0,NHEK@0.005478,NHLF@0,SKNSHRA@0.0128295, 0 0 0 0 ENSG00000255528.1 ENST00000526041.1 chr11:108873192-108908694 2 331 35169 intergenic 0 0 0,0,1 0 0,0,0 0 12.9949387244448 0 0 14.0439307344536 29.863 4.96978851963746 15.2586937359606 32.172 0 0 chimp,horse,human,macaque,marmoset,orangutan,panda, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000255028.1 ENST00000532992.1 chr11:109225812-109454633 5 535 228278 encompassing -7.14 0 0,0,0 0 0,0,0 0 10.7168934369497 63.418 0 14.1281200991773 116.505 0 15.4794066883362 118.864 0 0 cat,chimp,dog,elephant,horse,human,macaque,marmoset,orangutan,pig,rabbit, processed_transcript processed_transcript A549@0,AG04450@0,BJ@0,GM12878@0.0049175,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0.007634,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000255028.1 ENST00000532929.1 chr11:109283980-109454369 4 799 169584 encompassing 3.46 0 0,1,0 0 0,0,0 0 10.7931644494764 9.758 0 14.6527738465893 33.996 0 15.7680972261534 36.505 0 0 cat,chimp,cow,dog,elephant,horse,human,macaque,marmoset,orangutan,pig,rabbit, processed_transcript processed_transcript A549@0,AG04450@0,BJ@0,GM12878@0.0049175,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0.007634,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000254659.1 ENST00000534252.1 chr11:109622172-109694573 4 609 71786 intergenic -5.16 0 0,0,0 0 0,0,0 0 10.8572005683559 0 0 15.1433148524782 41.328 0 16.0615440336556 52.602 0 0 chimp,dog,elephant,horse,human,macaque,marmoset,orangutan,pig,rabbit, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0.008664,H1HESC@0,HELAS3@0.008659,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0.035177,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000254416.1 ENST00000526605.1 chr11:110225855-110277124 3 717 50548 intergenic -4.17 0 0,0,0 1 0,0,0 0 2.68024452006014 13.328 23.3514644351464 2.76707288122181 0 24.1311018131102 5.22353010999446 0 0 0 cat,chimp,horse,human,macaque,marmoset,orangutan,rabbit,rat, lincRNA processed_transcript A549@0.355119,AG04450@0.003113,BJ@0,GM12878@0.0619845,H1HESC@0.0044585,HELAS3@0.387192,HEPG2@0.0942475,HMEC@0,HSMM@0,HUVEC@0.0322175,K562@0,MCF7@5.80976,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000254416.1 ENST00000526703.1 chr11:110225924-110252710 3 552 26230 intergenic -5.73 0 0,0,0 1 0,0,0 0 5.16511627906977 13.328 30.3315217391304 5.33244376667937 0 31.3442028985507 10.06629813191 0 0 0 cat,chimp,horse,human,macaque,marmoset,orangutan,rabbit,rat, lincRNA processed_transcript A549@0.355119,AG04450@0.003113,BJ@0,GM12878@0.0619845,H1HESC@0.0044585,HELAS3@0.387192,HEPG2@0.0942475,HMEC@0,HSMM@0,HUVEC@0.0322175,K562@0,MCF7@5.80976,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000255428.1 ENST00000528614.1 chr11:111284967-111288911 4 2583 1355 intronic 0.52 1 0,1,1 0 0,0,0 48.618660472319 0 0 75.6817653890825 33.4678966789668 0 80.3925667828107 32.850184501845 0 0 0 chimp,horse,human,macaque,orangutan, lincRNA processed_transcript A549@0,AG04450@0.0037395,BJ@0,GM12878@0.153292,H1HESC@0,HELAS3@0.007277,HEPG2@0.0219555,HMEC@0.00141,HSMM@0,HUVEC@0,K562@0,MCF7@0.000823,NHEK@0,NHLF@0,SKNSHRA@0.002715, 0 0 0 0 ENSG00000255208.1 ENST00000531009.1 chr11:111320593-111322036 5 516 919 intronic 2.50 0 0,0,0 0 0,0,0 22.2771317829457 0 0 316.193798449612 20.9847660500544 52.773 228.156976744186 18.5756256800871 56.755 0 0 cat,chimp,dog,elephant,guinea_pig,horse,human,macaque,marmoset,mouse,orangutan,panda,pig,rabbit, antisense antisense A549@0.0053015,AG04450@0,BJ@0,GM12878@0.0203875,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000256523.1 ENST00000540312.1 chr11:111381325-111384610 2 1139 2144 intronic 1.18 0 0,1,0 0 0,0,0 53.4705882352941 34.2975746268657 69.408 79.8366988586479 35.1044776119403 107.602 81.4881474978051 31.1417910447761 100.527 0 0 chimp,cow,elephant,horse,human,macaque,marmoset,mouse,orangutan,panda,pig,rabbit, lincRNA lincRNA A549@0.0528585,AG04450@0.0120435,BJ@0.01025,GM12878@0,H1HESC@0.044734,HELAS3@0,HEPG2@0,HMEC@0.021532,HSMM@0.0056045,HUVEC@0,K562@0,MCF7@0.001802,NHEK@0.0391167,NHLF@0,SKNSHRA@0.043415, 0 0 0 0 ENSG00000254980.1 ENST00000530283.1 chr11:111384768-111397480 2 1153 11557 exonic 3.63 1 0,1,0 0 0,0,0 0 19.1277148048802 43.792 34.3928881179532 33.9301721900147 42.78 36.692974848222 34.403564938998 49.799 0 0 cat,chimp,cow,dog,elephant,guinea_pig,horse,human,macaque,marmoset,orangutan,panda,pig, antisense antisense A549@0.0170835,AG04450@0,BJ@0.0041905,GM12878@0.0207025,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0.017726,HSMM@0.031438,HUVEC@0,K562@0,MCF7@0.0035605,NHEK@0.0378427,NHLF@0,SKNSHRA@0.0246805, 0 0 0 0 ENSG00000254990.1 ENST00000529841.1 chr11:111639392-111649030 4 779 8853 intergenic -3.56 0 0,1,0 0 0,0,0 0 5.99661131819722 11.27 0 17.5247938551903 0 0 19.9649836213713 3.645 0 0 chimp,guinea_pig,human,macaque,marmoset,orangutan, lincRNA lincRNA A549@0.0194525,AG04450@0.0067745,BJ@0.009272,GM12878@0.0141915,H1HESC@0.0100375,HELAS3@0.185578,HEPG2@0.819192,HMEC@0.020918,HSMM@0.014196,HUVEC@0,K562@0.0334195,MCF7@0.0097065,NHEK@0.00978133,NHLF@0,SKNSHRA@0.042398, 0 0 0 0 ENSG00000254990.1 ENST00000534218.1 chr11:111639581-111649074 4 598 8889 intergenic -8.53 0 0,1,1 0 0,0,0 0 5.97232534593318 11.27 0 17.4538193272584 0 0 19.8841264484194 3.645 0 0 chimp,dog,guinea_pig,horse,human,macaque,marmoset,orangutan,rabbit, lincRNA lincRNA A549@0.0194525,AG04450@0.0067745,BJ@0.009272,GM12878@0.0141915,H1HESC@0.0100375,HELAS3@0.185578,HEPG2@0.819192,HMEC@0.020918,HSMM@0.014196,HUVEC@0,K562@0.0334195,MCF7@0.0097065,NHEK@0.00978133,NHLF@0,SKNSHRA@0.042398, 0 0 0 0 ENSG00000254450.1 ENST00000531305.1 chr11:111687938-111699936 2 682 11314 intronic 0 0 0,1,1 0 0,0,0 67.5513196480938 15.6185257203465 131.706 78.4296187683284 12.9512992752342 149.46 60.533724340176 12.7759413116493 144.24 0 0 chimp,cow,dog,elephant,guinea_pig,human,macaque,marmoset,orangutan,rabbit, sense_intronic sense_intronic A549@0,AG04450@0.0245485,BJ@0.0087775,GM12878@0.02576,H1HESC@0.005313,HELAS3@0.0477195,HEPG2@0.0194345,HMEC@0,HSMM@0,HUVEC@0.009611,K562@0.0317345,MCF7@0.003017,NHEK@0.010052,NHLF@0,SKNSHRA@0.0394305, 0 0 0 0 ENSG00000255334.1 ENST00000530733.1 chr11:111886031-111886848 2 320 495 intronic 0 0 0,0,1 0 0,0,0 0 0 0 0 0 0 5.875 0 0 0 1 chimp,human,macaque,marmoset, sense_intronic sense_intronic A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0.005413,NHLF@0,SKNSHRA@0.016403, 0 0 0 0 ENSG00000254638.1 ENST00000527589.1 chr11:112035920-112043329 4 590 6813 exonic 2.69 0 0,0,1 0 0,0,0 0 14.0714809922208 0 106.840677966102 31.4826067811537 0 55.8084745762712 29.2912079847351 1.944 0 0 cat,chimp,dog,elephant,guinea_pig,horse,human,macaque,marmoset,mouse,orangutan,panda,pig,rabbit, antisense antisense A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0.003826, 0 0 0 0 ENSG00000250303.2 ENST00000504610.2 chr11:112141472-112233257 4 2745 89034 intergenic 6.65 0 0,1,0 0 0,0,0 0 14.751566817171 0 0 12.5630321000966 7.225 0 14.9130444549273 7.225 1 1 chimp,human,macaque,marmoset,orangutan, lincRNA processed_transcript A549@0.503302,AG04450@2.37767,BJ@2.58684,GM12878@0.230431,H1HESC@0.277081,HELAS3@0.224576,HEPG2@0.186646,HMEC@0.319982,HSMM@7.72443,HUVEC@5.03783,K562@0.35077,MCF7@2.05008,NHEK@1.41404,NHLF@3.14128,SKNSHRA@0.600939, 0 0 0 0 ENSG00000250303.2 ENST00000532168.1 chr11:112151209-112162495 2 691 10593 intergenic 7.50 1 0,1,1 0 0,0,0 25.4703328509407 0 0 0.552821997105644 2.50646653450392 1.912 0.547033285094067 3.34730482394034 1.944 0 0 chimp,horse,human,macaque,marmoset,orangutan,panda, lincRNA processed_transcript A549@0.503302,AG04450@2.37767,BJ@2.58684,GM12878@0.230431,H1HESC@0.277081,HELAS3@0.224576,HEPG2@0.186646,HMEC@0.319982,HSMM@7.72443,HUVEC@5.03783,K562@0.35077,MCF7@2.05008,NHEK@1.41404,NHLF@3.14128,SKNSHRA@0.600939, 0 0 0 0 ENSG00000250303.2 ENST00000419895.3 chr11:112160924-112163444 2 1709 809 intergenic 2.85 0 0,1,1 1 0,0,0 64.7934464599181 0 0 8.13458162668227 0 7.335 8.42129900526624 0 7.327 0 1 chimp,human,orangutan, lincRNA processed_transcript A549@0.503302,AG04450@2.37767,BJ@2.58684,GM12878@0.230431,H1HESC@0.277081,HELAS3@0.224576,HEPG2@0.186646,HMEC@0.319982,HSMM@7.72443,HUVEC@5.03783,K562@0.35077,MCF7@2.05008,NHEK@1.41404,NHLF@3.14128,SKNSHRA@0.600939, 0 0 0 0 ENSG00000250303.2 ENST00000529938.1 chr11:112160991-112162893 2 1164 736 intergenic 2.85 0 0,1,0 1 0,0,0 15.1202749140893 0 0 5.10567010309278 0 7.335 5.32216494845361 0 7.327 0 0 chimp,human,macaque,orangutan,panda, lincRNA processed_transcript A549@0.503302,AG04450@2.37767,BJ@2.58684,GM12878@0.230431,H1HESC@0.277081,HELAS3@0.224576,HEPG2@0.186646,HMEC@0.319982,HSMM@7.72443,HUVEC@5.03783,K562@0.35077,MCF7@2.05008,NHEK@1.41404,NHLF@3.14128,SKNSHRA@0.600939, 0 0 0 0 ENSG00000250303.2 ENST00000527511.1 chr11:112163296-112164839 2 595 946 intergenic -3.35 0 0,1,1 0 0,0,0 162.03025210084 204.811839323467 41 4.71428571428571 74.723044397463 12.117 4.78823529411765 74.6257928118393 12.579 0 0 chimp,cow,dog,horse,human,macaque,marmoset,orangutan,pig, lincRNA processed_transcript A549@0.503302,AG04450@2.37767,BJ@2.58684,GM12878@0.230431,H1HESC@0.277081,HELAS3@0.224576,HEPG2@0.186646,HMEC@0.319982,HSMM@7.72443,HUVEC@5.03783,K562@0.35077,MCF7@2.05008,NHEK@1.41404,NHLF@3.14128,SKNSHRA@0.600939, 0 0 0 0 ENSG00000254968.2 ENST00000528496.1 chr11:112263841-112412639 3 852 147942 intergenic 7.42 0 0,0,1 0 0,0,0 47.8169014084507 13.5125251787863 78.12 27.4471830985916 22.2695380622136 73.436 24.4225352112676 25.3019696908248 75.871 0 0 chimp,elephant,horse,human,macaque,marmoset,mouse,orangutan, lincRNA lincRNA A549@0,AG04450@0.0026215,BJ@0,GM12878@0.0034205,H1HESC@0.0053205,HELAS3@0,HEPG2@0.01028,HMEC@0,HSMM@0.0072195,HUVEC@0,K562@0.0028725,MCF7@0,NHEK@0.003037,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000254968.2 ENST00000529238.1 chr11:112352955-112492452 4 516 138975 intergenic -2.39 0 0,1,0 0 0,0,0 0 22.5402698327037 41.292 0 26.5862781075733 79.678 0 29.2717323259579 80.889 0 0 chimp,cow,guinea_pig,horse,human,macaque,marmoset,orangutan, lincRNA lincRNA A549@0,AG04450@0.0026215,BJ@0,GM12878@0.0034205,H1HESC@0.0053205,HELAS3@0,HEPG2@0.01028,HMEC@0,HSMM@0.0072195,HUVEC@0,K562@0.0028725,MCF7@0,NHEK@0.003037,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000254968.2 ENST00000529827.1 chr11:112355068-112358559 3 458 3029 intergenic -1.93 1 0,0,0 0 0,0,0 0 0 0 0 10.7088147903599 0 0 11.2066688676131 0 1 1 chimp,human,macaque,marmoset,orangutan, lincRNA lincRNA A549@0,AG04450@0.0026215,BJ@0,GM12878@0.0034205,H1HESC@0.0053205,HELAS3@0,HEPG2@0.01028,HMEC@0,HSMM@0.0072195,HUVEC@0,K562@0.0028725,MCF7@0,NHEK@0.003037,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000255484.1 ENST00000525984.1 chr11:112404945-112426525 4 2061 19513 intergenic 4.28 1 0,0,0 0 0,0,0 7.03056768558952 9.09967713831804 0 14.6069868995633 9.29072925741813 0 14.9767103347889 10.0485317480654 0 0 0 chimp,cow,human,macaque,marmoset,orangutan,rabbit, lincRNA lincRNA A549@0,AG04450@0.009369,BJ@0,GM12878@0,H1HESC@0.008846,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0.012172,HUVEC@0.0011775,K562@0,MCF7@0.01316,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000254626.1 ENST00000524772.1 chr11:112658027-112666577 2 830 7718 intergenic -0.48 0 0,0,0 0 0,0,0 102.420481927711 17.9927442342576 18.164 24.0734939759036 27.0345944545219 100.789 27.9903614457831 29.652759782327 102.802 0 0 chimp,cow,dog,guinea_pig,horse,human,macaque,marmoset,orangutan,panda,rabbit, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0.007686,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000247416.2 ENST00000500537.2 chr11:112830002-112834182 3 1931 2245 intergenic 7.36 1 0,1,0 0 0,0,0 36.6261004660797 173.615590200445 0 55.0895908855515 275.446325167038 9.308 59.1512169860176 235.024053452116 11.507 0 1 chimp,human,macaque,orangutan, lincRNA processed_transcript A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0.0483145,HELAS3@0,HEPG2@0.001515,HMEC@0,HSMM@0.318142,HUVEC@0,K562@0,MCF7@0.001063,NHEK@0,NHLF@0.0050445,SKNSHRA@0.229838, 0 0 0 0 ENSG00000247416.2 ENST00000532002.1 chr11:112831050-112832021 2 564 405 intergenic 0 0 0,1,0 0 0,0,0 40.7801418439716 116.41975308642 209.633 72.7801418439716 153.733333333333 368.835 74.4521276595745 156.691358024691 347.538 0 0 cat,chimp,cow,dog,elephant,guinea_pig,human,macaque,marmoset,orangutan,panda,pig,rabbit, lincRNA processed_transcript A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0.0483145,HELAS3@0,HEPG2@0.001515,HMEC@0,HSMM@0.318142,HUVEC@0,K562@0,MCF7@0.001063,NHEK@0,NHLF@0.0050445,SKNSHRA@0.229838, 0 0 0 0 ENSG00000227487.3 ENST00000533638.1 chr11:113140254-113144528 3 615 3655 exonic 12.83 0 0,0,0 0 0,1,0 338.891056910569 133.348837209302 77.06 367.982113821138 135.124213406293 35.62 330.252032520325 129.265389876881 26.863 0 0 chimp,dog,elephant,guinea_pig,human,macaque,marmoset,mouse,orangutan,rabbit,rat, antisense antisense A549@0,AG04450@0,BJ@0,GM12878@0.001865,H1HESC@0.0105365,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0.0021085,HUVEC@0,K562@0,MCF7@0,NHEK@0.0272667,NHLF@0,SKNSHRA@0.0063075, 0 0 0 0 ENSG00000227487.3 ENST00000526229.1 chr11:113140441-113144623 2 1079 3101 exonic 12.83 0 0,1,0 0 0,1,0 240.518999073216 154.192196065785 36 240.529193697868 156.880683650435 10.348 214.253012048193 149.712995807804 7.501 0 0 chimp,cow,dog,elephant,guinea_pig,horse,human,macaque,marmoset,orangutan,pig,rabbit, antisense antisense A549@0,AG04450@0,BJ@0,GM12878@0.001865,H1HESC@0.0105365,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0.0021085,HUVEC@0,K562@0,MCF7@0,NHEK@0.0272667,NHLF@0,SKNSHRA@0.0063075, 0 0 0 0 ENSG00000255129.1 ENST00000529416.1 chr11:113149159-113154712 4 739 4808 intergenic 3.53 1 0,0,1 0 0,0,0 0 0 0 4.35453315290934 2.18032445923461 0 4.43843031123139 2.94238768718802 0 0 0 cat,chimp,horse,human,macaque,marmoset,orangutan, antisense antisense A549@0.0866595,AG04450@0.042866,BJ@0.0594885,GM12878@0.132234,H1HESC@0.282423,HELAS3@0,HEPG2@0.004121,HMEC@0.263269,HSMM@0.3931,HUVEC@0,K562@0.0277255,MCF7@0.002706,NHEK@0.42067,NHLF@0.051243,SKNSHRA@0.224689, 0 0 0 0 ENSG00000255129.1 ENST00000526487.1 chr11:113149275-113185146 4 584 35281 intergenic 3.53 0 0,1,0 1 0,0,0 0 0 0 0 1.48139225078654 7.104 0 1.73745075252969 7.16 0 0 chimp,cow,elephant,horse,human,macaque,marmoset,orangutan, antisense antisense A549@0.0866595,AG04450@0.042866,BJ@0.0594885,GM12878@0.132234,H1HESC@0.282423,HELAS3@0,HEPG2@0.004121,HMEC@0.263269,HSMM@0.3931,HUVEC@0,K562@0.0277255,MCF7@0.002706,NHEK@0.42067,NHLF@0.051243,SKNSHRA@0.224689, 0 0 0 0 ENSG00000255129.1 ENST00000533504.1 chr11:113150105-113185159 3 514 34536 intergenic -3.46 0 1,1,1 1 0,0,0 0 0 0 0 1.51334839008571 7.104 0 1.77493050729673 7.16 0 0 chimp,elephant,horse,human,macaque,marmoset,orangutan, antisense antisense A549@0.0866595,AG04450@0.042866,BJ@0.0594885,GM12878@0.132234,H1HESC@0.282423,HELAS3@0,HEPG2@0.004121,HMEC@0.263269,HSMM@0.3931,HUVEC@0,K562@0.0277255,MCF7@0.002706,NHEK@0.42067,NHLF@0.051243,SKNSHRA@0.224689, 0 0 0 0 ENSG00000256757.1 ENST00000546284.1 chr11:113276043-113282839 4 520 6270 intronic 1.62 0 0,0,0 0 0,0,0 0 44.828389154705 0 0 60.004625199362 0 0 53.621052631579 0 0 0 chimp,horse,human,macaque,marmoset,orangutan, antisense antisense A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0.005065,HEPG2@0,HMEC@0,HSMM@0.0078535,HUVEC@0,K562@0,MCF7@0,NHEK@0.0136733,NHLF@0,SKNSHRA@0.021227, 0 0 0 0 ENSG00000256603.1 ENST00000543486.1 chr11:113641115-113642413 2 584 712 intronic -4.98 0 0,0,1 0 0,0,0 0 0 0 0 0 0 106.643835616438 0 0 0 0 chimp,dog,elephant,guinea_pig,horse,human,macaque,orangutan,rabbit, antisense antisense A549@0.04368,AG04450@0.020131,BJ@0.005851,GM12878@0.079711,H1HESC@0.0456845,HELAS3@0.100686,HEPG2@0.0416885,HMEC@0.011596,HSMM@0,HUVEC@0.0276435,K562@0.215224,MCF7@0.0742615,NHEK@0.0100543,NHLF@0,SKNSHRA@0.0199815, 0 0 0 0 ENSG00000256452.1 ENST00000399123.2 chr11:113688799-113693180 3 155 4222 intronic -20.56 0 0,0,1 0 0,0,0 0 0 64.801 0 11.2475130270014 56.801 0 51.8647560397916 55.759 0 1 chimp,human,macaque,orangutan, antisense antisense A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000256947.1 ENST00000544925.1 chr11:114081338-114227293 3 390 145561 intronic 0 0 0,0,0 0 0,0,0 326.523076923077 33.0776238140711 0 8.8974358974359 36.5423499426357 26.22 419.84358974359 39.3786316389692 28.025 0 0 cat,chimp,cow,dog,elephant,guinea_pig,horse,human,macaque,marmoset,mouse,orangutan,panda,pig,rabbit,rat, antisense antisense A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000256195.1 ENST00000534904.1 chr11:114231357-114250767 3 3838 15568 intergenic 5.35 1 0,0,0 0 0,0,0 0 27.2029162384378 0 0 29.940775950668 7.74 0 34.1884635149024 9.721 0 1 chimp,human,macaque,orangutan, antisense antisense A549@0.000719,AG04450@0.0011965,BJ@0,GM12878@0.002441,H1HESC@0,HELAS3@0.0047465,HEPG2@0.0011095,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000256558.1 ENST00000546273.1 chr11:115045697-115046044 2 299 46 exonic -1.39 0 0,1,0 0 0,0,0 567.33110367893 589 492.765 582.598662207358 650 499.176 585.234113712375 645 454.557 0 0 cat,chimp,cow,dog,elephant,guinea_pig,horse,human,macaque,marmoset,opossum,orangutan,panda,pig,rabbit, antisense lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0.0289135,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000256972.1 ENST00000545593.1 chr11:115204296-115210981 2 328 6355 intronic -4.08 0 0,0,0 0 0,0,0 0 29.1650668764752 57.564 0 37.7246262785209 0 0 39.8605822187254 0 0 0 cat,chimp,cow,dog,elephant,horse,human,macaque,marmoset,orangutan,panda,pig,rabbit, antisense lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000255580.1 ENST00000535704.1 chr11:115234348-115248649 2 816 13483 intronic 2.60 0 0,0,0 0 0,0,0 26.5294117647059 53.0307053326411 289.369 73.3799019607843 57.7576948750278 192.225 83.8063725490196 61.3933842616628 191.552 0 0 cat,chimp,cow,dog,elephant,guinea_pig,horse,human,macaque,marmoset,mouse,orangutan,panda,pig,rabbit, antisense lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000256315.1 ENST00000543182.1 chr11:115267474-115268376 2 524 376 intronic 2.02 1 0,0,0 0 0,0,0 165.658396946565 588.276595744681 173.463 179.05534351145 584.058510638298 192.127 181.87786259542 602.393617021277 177.747 0 0 chimp,dog,elephant,guinea_pig,horse,human,macaque,marmoset,mouse,orangutan,panda,pig,rabbit,rat, antisense lincRNA A549@0,AG04450@0.010138,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0.0040975,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000256315.1 ENST00000539685.1 chr11:115267538-115268295 2 382 373 intronic 2.02 1 0,1,0 0 0,0,0 119.510471204188 593.008042895442 214.615 129.175392670157 588.756032171582 236.607 139.397905759162 607.238605898123 219.684 0 0 cat,chimp,cow,dog,elephant,horse,human,macaque,marmoset,orangutan,panda,pig, antisense antisense A549@0,AG04450@0.010138,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0.0040975,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000256315.1 ENST00000540545.1 chr11:115267569-115268337 2 713 53 intronic 2.02 1 0,1,0 0 0,0,0 347.201963534362 0 234.548 347.967741935484 0 258.152 360.799438990182 0 242.934 0 0 cat,chimp,cow,dog,elephant,horse,human,macaque,marmoset,opossum,orangutan,panda,pig, antisense antisense A549@0,AG04450@0.010138,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0.0040975,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000256281.1 ENST00000544663.1 chr11:115403040-115403671 2 292 337 intergenic -9.01 0 0,0,1 0 0,0,0 0 0 0 0 0 0 0 0 0 0 0 cat,chimp,dog,elephant,horse,human,macaque,marmoset,orangutan,panda,pig, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000255689.1 ENST00000306533.8 chr11:115453015-115471057 3 373 17665 intergenic -5.64 1 0,1,0 0 0,0,0 7.07774798927614 24.1951882253043 20.817 0 26.1444664590999 15.261 0 26.7412397395981 17.227 0 1 chimp,human,orangutan, lincRNA lincRNA A549@0,AG04450@0.011922,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0.01089,HSMM@0,HUVEC@0,K562@0,MCF7@0.0109365,NHEK@0,NHLF@0,SKNSHRA@0.269724, 0 0 0 0 ENSG00000255599.1 ENST00000424313.2 chr11:115498783-115500461 3 476 1198 intergenic -4.46 0 0,0,0 0 0,0,0 20.8403361344538 0 43.478 4.85714285714286 0 60.521 8.77100840336134 0 71.44 0 0 chimp,elephant,human,macaque,marmoset,orangutan,rabbit, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0.0173235,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0.144312, 0 0 0 0 ENSG00000256717.1 ENST00000539305.1 chr11:115530376-115713864 3 571 182913 intergenic -2.25 0 0,1,0 0 0,0,0 37.9124343257443 52.4420243503742 77.831 32.7005253940455 52.1070891626074 77.276 49.2399299474606 52.2823036088195 85.594 0 0 chimp,guinea_pig,horse,human,macaque,marmoset,mouse,opossum,orangutan,pig,rabbit, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0.0035845,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0.0142165, 0 0 0 0 ENSG00000246100.2 ENST00000499809.1 chr11:115624966-115630912 3 3319 2623 intergenic 9.80 0 0,1,1 1 0,0,0 16.4507381741488 78.8577964163172 23.868 0.971376920759265 71.2931757529546 41.41 3.17143717987346 68.5718642775448 47.238 0 1 chimp,human,orangutan, lincRNA lincRNA A549@0.003251,AG04450@0.930033,BJ@0.556282,GM12878@0.0012135,H1HESC@0.186997,HELAS3@0,HEPG2@0.000882,HMEC@0.102903,HSMM@0,HUVEC@0,K562@0.000806,MCF7@0,NHEK@0.461866,NHLF@0.251878,SKNSHRA@0.225776, 0 0 0 0 ENSG00000246100.2 ENST00000501294.1 chr11:115628169-115631345 3 979 2193 intergenic -0.79 0 0,1,1 0 0,0,0 0.953013278855976 93.7528499772002 23.868 11.3217568947906 80.21796625627 87.327 11.7354443309499 78.218878248974 96.865 0 0 chimp,dog,elephant,guinea_pig,horse,human,macaque,marmoset,orangutan,pig,rat, lincRNA lincRNA A549@0.003251,AG04450@0.930033,BJ@0.556282,GM12878@0.0012135,H1HESC@0.186997,HELAS3@0,HEPG2@0.000882,HMEC@0.102903,HSMM@0,HUVEC@0,K562@0.000806,MCF7@0,NHEK@0.461866,NHLF@0.251878,SKNSHRA@0.225776, 0 0 0 0 ENSG00000246100.2 ENST00000514294.2 chr11:115628181-115630915 2 993 1739 intergenic 15.92 0 0,1,0 1 0,0,0 0 118.944220816561 23.868 3.08157099697885 105.774583093732 41.41 4.67069486404834 101.600920069005 47.238 0 0 chimp,elephant,horse,human,macaque,marmoset,orangutan,pig, lincRNA lincRNA A549@0.003251,AG04450@0.930033,BJ@0.556282,GM12878@0.0012135,H1HESC@0.186997,HELAS3@0,HEPG2@0.000882,HMEC@0.102903,HSMM@0,HUVEC@0,K562@0.000806,MCF7@0,NHEK@0.461866,NHLF@0.251878,SKNSHRA@0.225776, 0 0 0 0 ENSG00000246100.2 ENST00000537070.1 chr11:115628435-115630904 2 691 1776 intergenic 9.80 0 0,1,0 1 0,0,0 0 116.466216216216 23.256 4.42836468885673 103.570945945946 39.638 6.71201157742402 99.4842342342342 45.406 0 0 chimp,cow,dog,elephant,guinea_pig,horse,human,macaque,marmoset,orangutan,pig,rat, lincRNA lincRNA A549@0.003251,AG04450@0.930033,BJ@0.556282,GM12878@0.0012135,H1HESC@0.186997,HELAS3@0,HEPG2@0.000882,HMEC@0.102903,HSMM@0,HUVEC@0,K562@0.000806,MCF7@0,NHEK@0.461866,NHLF@0.251878,SKNSHRA@0.225776, 0 0 0 0 ENSG00000246100.2 ENST00000535683.1 chr11:115628638-115630918 2 502 1776 intergenic 9.80 0 1,1,1 1 0,0,0 0 116.466216216216 23.868 0 103.570945945946 41.41 2.90438247011952 99.4842342342342 47.238 0 0 cat,chimp,dog,elephant,horse,human,macaque,marmoset,orangutan,panda,pig, lincRNA lincRNA A549@0.003251,AG04450@0.930033,BJ@0.556282,GM12878@0.0012135,H1HESC@0.186997,HELAS3@0,HEPG2@0.000882,HMEC@0.102903,HSMM@0,HUVEC@0,K562@0.000806,MCF7@0,NHEK@0.461866,NHLF@0.251878,SKNSHRA@0.225776, 0 0 0 0 ENSG00000257067.1 ENST00000537491.1 chr11:115803492-115813713 4 544 9671 intergenic -4.25 0 0,1,1 0 0,0,0 130.860294117647 33.9274118498604 170.867 129.09375 38.7887498707476 203.879 127.099264705882 37.7195739840761 208.973 0 0 cat,chimp,cow,dog,guinea_pig,horse,human,macaque,marmoset,mouse,orangutan,panda,rabbit, lincRNA lincRNA A549@0,AG04450@0,BJ@0.0089855,GM12878@0.033021,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0.0207225, 0 0 0 0 ENSG00000257067.1 ENST00000539222.1 chr11:115803575-115810928 3 300 7049 intergenic 0 0 0,1,0 0 0,0,0 130.34 25.2489714853171 194.996 145.413333333333 35.6769754575117 218.937 125.646666666667 35.26259043836 229.044 0 0 cat,chimp,cow,dog,horse,human,macaque,marmoset,mouse,orangutan,panda,pig,rabbit,rat, lincRNA lincRNA A549@0,AG04450@0,BJ@0.0089855,GM12878@0.033021,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0.0207225, 0 0 0 0 ENSG00000236437.1 ENST00000452629.1 chr11:116367616-116371347 2 919 2810 intergenic 1.30 0 0,1,0 0 0,0,0 1.24918389553863 55.0861209964413 199.863 7.60500544069641 71.2697508896797 223.318 9.75408052230685 78.5391459074733 242.542 0 0 chimp,guinea_pig,human,macaque,marmoset,orangutan,pig, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0.034289,HELAS3@0.0543855,HEPG2@0.0349925,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0.370811, 0 0 0 0 ENSG00000237937.1 ENST00000444123.1 chr11:116510139-116528969 3 580 18246 intergenic -1.53 1 0,0,0 0 0,0,0 0 34.1862325989258 41.674 0 43.4155431327414 10.811 3.64655172413793 44.2645511344952 11.264 0 0 chimp,dog,horse,human,macaque,marmoset,orangutan,pig, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000237937.1 ENST00000439483.1 chr11:116510197-116525906 3 366 15339 intergenic 0.94 0 0,0,0 0 0,0,0 0 29.5441032661842 41.674 0 36.1986439793989 10.811 5.77868852459016 38.0135602060108 11.264 0 0 chimp,human,macaque,marmoset,orangutan, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000226645.1 ENST00000439104.1 chr11:116644105-116644921 2 417 397 intergenic -1.43 1 0,0,1 0 0,0,0 0 0 34.23 0 0 65.997 0 0 53.031 0 0 chimp,human,macaque,marmoset,orangutan, antisense antisense A549@0,AG04450@0.0053495,BJ@0,GM12878@0.107669,H1HESC@0.041969,HELAS3@0.118489,HEPG2@0.11643,HMEC@0.009772,HSMM@0.0054405,HUVEC@0.0142055,K562@0.109214,MCF7@0.0239915,NHEK@0,NHLF@0.004657,SKNSHRA@0.0807425, 0 0 0 0 ENSG00000231611.1 ENST00000366405.2 chr11:116645826-116646592 2 596 168 intergenic -3.21 0 0,0,0 0 0,0,0 0 0 0 0 0 0 0 0 0 0 0 chimp,human,marmoset,orangutan, lincRNA lincRNA A549@0.49602,AG04450@0.262062,BJ@0.335526,GM12878@0.3449,H1HESC@1.18399,HELAS3@0.356428,HEPG2@0.631742,HMEC@0.506693,HSMM@1.89782,HUVEC@0.859097,K562@0.215577,MCF7@0.074155,NHEK@0.417193,NHLF@0.459577,SKNSHRA@0.667735, 1 96 0 0 ENSG00000236267.1 ENST00000457746.1 chr11:116683920-116684719 2 331 466 intergenic -0.13 0 0,1,0 0 0,0,0 0 0 0 0 5.42918454935622 0 0 5.73605150214592 0 0 0 chimp,cow,dog,human,macaque,orangutan, antisense antisense A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0.0250695,HEPG2@0.129861,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000235910.1 ENST00000444200.1 chr11:116706833-116726445 2 561 19049 exonic -2.94 0 0,1,0 1 0,0,0 15.5080213903743 30.178067090136 46.624 50.8680926916221 41.9153761352302 21.89 36.0053475935829 45.0701874114127 25.892 0 0 cat,chimp,cow,dog,elephant,guinea_pig,human,macaque,marmoset,orangutan,panda,pig,rabbit, antisense antisense A549@0,AG04450@0.0159245,BJ@0.022992,GM12878@0.007161,H1HESC@0.034451,HELAS3@0.029656,HEPG2@0.0531455,HMEC@0,HSMM@0.0263715,HUVEC@0.032777,K562@0,MCF7@0,NHEK@0,NHLF@0.0171745,SKNSHRA@0, 0 0 0 0 ENSG00000231865.1 ENST00000454832.1 chr11:116756762-116761437 3 2469 2202 intronic -7.28 0 0,0,1 0 0,0,0 48.3353584447145 0 0 40.424463345484 17.0840145322434 0 37.6597812879708 18.5272479564033 0 0 0 chimp,human,macaque,marmoset,orangutan, sense_intronic sense_intronic A549@0.095331,AG04450@0.065607,BJ@0.0764835,GM12878@0.297422,H1HESC@0.150631,HELAS3@0.0750915,HEPG2@0.061843,HMEC@0.004533,HSMM@0.0191875,HUVEC@0.211758,K562@0.219887,MCF7@0.0541825,NHEK@0.161766,NHLF@0.0483805,SKNSHRA@0.149217, 0 0 0 0 ENSG00000224077.1 ENST00000442124.1 chr11:116969703-116978886 3 480 8699 intergenic -0.05 0 0,0,1 0 0,0,0 12.4666666666667 1.34452235889183 87.552 13.8916666666667 10.8461892171514 150.942 14.4583333333333 12.6849063110702 259.66 0 0 cat,chimp,cow,elephant,horse,human,macaque,marmoset,orangutan,panda,pig,rabbit, antisense antisense A549@0,AG04450@0,BJ@0,GM12878@0.012521,H1HESC@0.0543455,HELAS3@0.005495,HEPG2@0.0807385,HMEC@0,HSMM@0,HUVEC@0.0552875,K562@0,MCF7@0.069543,NHEK@0,NHLF@0,SKNSHRA@0.0115145, 0 0 0 0 ENSG00000255274.2 ENST00000527329.1 chr11:117886487-117957508 4 300 70715 intronic 1.02 0 0,0,0 0 0,0,0 43.7833333333333 3.76922859365057 17.225 81.6966666666667 4.00931909778689 13.548 71.6033333333333 6.20609488793043 11.495 1 1 chimp,human,macaque,marmoset,orangutan, processed_transcript processed_transcript A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000255274.2 ENST00000527695.1 chr11:117886487-117957508 3 230 70787 intronic -6.98 0 0,0,0 0 0,0,0 57.1086956521739 3.76539477587693 17.225 106.560869565217 4.00524107533869 13.548 84.9434782608696 6.22724511562858 11.495 1 1 chimp,human,macaque,marmoset,orangutan, processed_transcript processed_transcript A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000255435.1 ENST00000532597.1 chr11:118382626-118401292 3 310 18352 exonic -2.74 0 0,1,1 0 0,0,0 150.638709677419 168.692022667829 118.944 184.258064516129 139.450087183958 180.528 203.332258064516 134.436846120314 143.589 0 0 cat,chimp,cow,dog,elephant,guinea_pig,horse,human,macaque,marmoset,mouse,opossum,orangutan,panda,rat, antisense antisense A549@0.007937,AG04450@0.039488,BJ@0.005721,GM12878@0.0269425,H1HESC@0,HELAS3@0.023989,HEPG2@0,HMEC@0,HSMM@0.006574,HUVEC@0,K562@0.015387,MCF7@0,NHEK@0.003114,NHLF@0.0522625,SKNSHRA@0.13596, 0 0 0 0 ENSG00000255435.1 ENST00000525992.1 chr11:118390118-118392034 2 346 1568 exonic 4.02 1 0,0,1 0 0,0,0 127.043352601156 75.313137755102 275.085 195.468208092486 122.614795918367 224.504 187.263005780347 115.616071428571 239.058 0 0 cat,chimp,cow,dog,elephant,guinea_pig,horse,human,macaque,marmoset,mouse,opossum,orangutan,panda,rat, antisense retained_intron A549@0.007937,AG04450@0.039488,BJ@0.005721,GM12878@0.0269425,H1HESC@0,HELAS3@0.023989,HEPG2@0,HMEC@0,HSMM@0.006574,HUVEC@0,K562@0.015387,MCF7@0,NHEK@0.003114,NHLF@0.0522625,SKNSHRA@0.13596, 0 0 0 0 ENSG00000255435.1 ENST00000528578.1 chr11:118390211-118401284 4 419 10648 exonic 4.02 1 0,1,1 0 0,0,0 167.589498806683 285.463936889557 118.944 247.859188544153 231.769346356123 180.528 226.355608591885 223.901389932382 143.589 0 0 cat,chimp,cow,dog,elephant,guinea_pig,horse,human,macaque,marmoset,mouse,opossum,orangutan,panda,rat, antisense antisense A549@0.007937,AG04450@0.039488,BJ@0.005721,GM12878@0.0269425,H1HESC@0,HELAS3@0.023989,HEPG2@0,HMEC@0,HSMM@0.006574,HUVEC@0,K562@0.015387,MCF7@0,NHEK@0.003114,NHLF@0.0522625,SKNSHRA@0.13596, 0 0 0 0 ENSG00000255176.1 ENST00000530198.1 chr11:118507338-118508815 2 1386 89 intronic 4.76 0 0,0,0 0 0,0,0 0 0 0 1.13852813852814 26.5955056179775 1.912 1.17748917748918 27.5056179775281 1.944 0 1 chimp,human,marmoset,orangutan, antisense antisense A549@0.08101,AG04450@0.487548,BJ@0.458108,GM12878@0.003565,H1HESC@0.739716,HELAS3@0.12008,HEPG2@0.252982,HMEC@1.83736,HSMM@0.538089,HUVEC@1.47013,K562@0.328068,MCF7@1.15812,NHEK@0.439972,NHLF@1.07514,SKNSHRA@0.575894, 0 0 0 0 ENSG00000255422.1 ENST00000526274.1 chr11:118575316-118620973 3 422 45231 exonic 5.40 0 0,1,1 0 0,0,0 66.5876777251185 13.5237779399085 0 60.7274881516588 14.9626583537839 0 57.3364928909953 14.8090247838872 0 1 1 chimp,human,macaque,marmoset,orangutan, antisense antisense A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0.00900967,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000254428.1 ENST00000531087.1 chr11:118874452-118875603 2 521 628 intronic -4.99 0 0,0,0 0 0,0,0 0 0 0 0 0 0 474.541266794626 361.955414012739 557.54 1 1 chimp,human,macaque,marmoset,orangutan, antisense antisense A549@0,AG04450@0.009006,BJ@0,GM12878@0,H1HESC@0.0047315,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0.164347,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000137700.10 ENST00000525102.1 chr11:118894824-118901616 10 2834 3940 exonic 59.74 0 1,1,1 1 0,1,1 192.626676076217 58.4672588832487 0 280.261115031757 62.9789340101523 3.897 275.155610444601 52.9581218274112 1.632 0 0 cat,chimp,cow,dog,elephant,guinea_pig,horse,human,macaque,marmoset,mouse,panda,pig,rabbit,rat, antisense antisense A549@6.36022,AG04450@3.71251,BJ@6.34103,GM12878@8.98175,H1HESC@32.1103,HELAS3@16.3522,HEPG2@24.7833,HMEC@12.5901,HSMM@4.01396,HUVEC@14.2117,K562@22.1262,MCF7@26.0842,NHEK@10.4929,NHLF@5.41315,SKNSHRA@7.15132, 0 0 0 0 ENSG00000137700.10 ENST00000357590.5 chr11:118895063-118901616 12 2342 4189 exonic 102.98 1 1,1,1 1 0,1,1 229.644321093083 56.7736930054906 0 346.941929974381 54.4740988302698 3.897 340.65243381725 45.0740033420864 1.632 0 0 cat,chimp,cow,dog,elephant,guinea_pig,horse,human,macaque,marmoset,mouse,panda,pig,rabbit,rat, antisense antisense A549@6.36022,AG04450@3.71251,BJ@6.34103,GM12878@8.98175,H1HESC@32.1103,HELAS3@16.3522,HEPG2@24.7833,HMEC@12.5901,HSMM@4.01396,HUVEC@14.2117,K562@22.1262,MCF7@26.0842,NHEK@10.4929,NHLF@5.41315,SKNSHRA@7.15132, 0 0 0 0 ENSG00000137700.10 ENST00000538950.1 chr11:118895063-118901616 11 2019 4514 exonic 78.40 1 1,1,1 1 0,1,1 242.941555225359 63.2611874169251 0 357.413075780089 71.0405405405405 3.897 345.8568598316 64.2299512627381 1.632 0 0 cat,chimp,cow,dog,elephant,guinea_pig,horse,human,macaque,marmoset,mouse,panda,pig,rabbit,rat, antisense antisense A549@6.36022,AG04450@3.71251,BJ@6.34103,GM12878@8.98175,H1HESC@32.1103,HELAS3@16.3522,HEPG2@24.7833,HMEC@12.5901,HSMM@4.01396,HUVEC@14.2117,K562@22.1262,MCF7@26.0842,NHEK@10.4929,NHLF@5.41315,SKNSHRA@7.15132, 0 0 0 0 ENSG00000137700.10 ENST00000545985.1 chr11:118895063-118901616 11 2593 3940 exonic 101.52 1 1,1,1 1 0,1,1 210.173544157347 58.4672588832487 0 306.08638642499 62.9789340101523 3.897 300.44465869649 52.9581218274112 1.632 0 0 cat,chimp,cow,dog,elephant,guinea_pig,horse,human,macaque,marmoset,mouse,panda,pig,rabbit,rat, antisense antisense A549@6.36022,AG04450@3.71251,BJ@6.34103,GM12878@8.98175,H1HESC@32.1103,HELAS3@16.3522,HEPG2@24.7833,HMEC@12.5901,HSMM@4.01396,HUVEC@14.2117,K562@22.1262,MCF7@26.0842,NHEK@10.4929,NHLF@5.41315,SKNSHRA@7.15132, 0 0 0 0 ENSG00000137700.10 ENST00000526275.1 chr11:118895066-118899744 6 2620 2048 exonic 59.74 1 0,0,1 0 0,1,1 184.703816793893 70.8154296875 119.908 277.139694656489 66.63037109375 164.654 265.61106870229 52.91455078125 169.916 0 0 chimp,cow,dog,elephant,guinea_pig,horse,human,macaque,marmoset,mouse,panda,pig,rat, antisense retained_intron A549@6.36022,AG04450@3.71251,BJ@6.34103,GM12878@8.98175,H1HESC@32.1103,HELAS3@16.3522,HEPG2@24.7833,HMEC@12.5901,HSMM@4.01396,HUVEC@14.2117,K562@22.1262,MCF7@26.0842,NHEK@10.4929,NHLF@5.41315,SKNSHRA@7.15132, 0 0 0 0 ENSG00000137700.10 ENST00000330775.7 chr11:118895066-118901571 11 2104 4381 exonic 104.09 1 1,1,1 1 0,1,1 254.962452471483 54.6019173704634 0 379.539923954373 54.7117096553298 5.427 373.427756653992 45.404702122803 2.668 0 0 cat,chimp,cow,dog,elephant,guinea_pig,horse,human,macaque,marmoset,mouse,panda,pig,rabbit,rat, antisense antisense A549@6.36022,AG04450@3.71251,BJ@6.34103,GM12878@8.98175,H1HESC@32.1103,HELAS3@16.3522,HEPG2@24.7833,HMEC@12.5901,HSMM@4.01396,HUVEC@14.2117,K562@22.1262,MCF7@26.0842,NHEK@10.4929,NHLF@5.41315,SKNSHRA@7.15132, 0 0 0 0 ENSG00000137700.10 ENST00000532085.1 chr11:118895066-118901573 3 5859 644 exonic 16.82 1 1,1,1 1 0,1,1 132.655060590544 5.48136645962733 0 175.252773510838 28.9767080745342 5.427 166.033282130056 29.5124223602485 2.668 0 0 chimp,dog,elephant,horse,human,macaque,marmoset,panda, antisense retained_intron A549@6.36022,AG04450@3.71251,BJ@6.34103,GM12878@8.98175,H1HESC@32.1103,HELAS3@16.3522,HEPG2@24.7833,HMEC@12.5901,HSMM@4.01396,HUVEC@14.2117,K562@22.1262,MCF7@26.0842,NHEK@10.4929,NHLF@5.41315,SKNSHRA@7.15132, 0 0 0 0 ENSG00000137700.10 ENST00000527992.1 chr11:118895098-118901590 9 2031 4445 exonic 59.74 1 1,1,1 1 0,1,1 265.263909404234 53.503937007874 0 378.003938946332 58.6017997750281 5.427 370.67109798129 49.9259842519685 2.668 0 0 cat,chimp,cow,dog,elephant,guinea_pig,horse,human,macaque,marmoset,mouse,opossum,panda,pig,rabbit,rat, antisense antisense A549@6.36022,AG04450@3.71251,BJ@6.34103,GM12878@8.98175,H1HESC@32.1103,HELAS3@16.3522,HEPG2@24.7833,HMEC@12.5901,HSMM@4.01396,HUVEC@14.2117,K562@22.1262,MCF7@26.0842,NHEK@10.4929,NHLF@5.41315,SKNSHRA@7.15132, 0 0 0 0 ENSG00000137700.10 ENST00000456881.2 chr11:118895319-118901582 11 1717 4526 exonic 96.48 0 0,1,0 1 0,1,1 312.04834012813 52.9069818824569 0 437.63715783343 59.1641626159965 5.427 426.84507862551 52.171011931065 2.668 0 0 cat,chimp,cow,dog,elephant,guinea_pig,horse,human,macaque,marmoset,mouse,opossum,panda,pig,rabbit,rat, antisense antisense A549@6.36022,AG04450@3.71251,BJ@6.34103,GM12878@8.98175,H1HESC@32.1103,HELAS3@16.3522,HEPG2@24.7833,HMEC@12.5901,HSMM@4.01396,HUVEC@14.2117,K562@22.1262,MCF7@26.0842,NHEK@10.4929,NHLF@5.41315,SKNSHRA@7.15132, 0 0 0 0 ENSG00000137700.10 ENST00000530407.1 chr11:118895588-118901582 10 1462 4514 exonic 59.74 0 1,1,1 1 0,1,1 336.130642954856 63.2611874169251 0 469.486320109439 71.0405405405405 5.427 455.623803009576 64.2299512627381 2.668 0 0 cat,chimp,cow,dog,elephant,guinea_pig,horse,human,macaque,marmoset,mouse,opossum,panda,pig,rabbit,rat, antisense antisense A549@6.36022,AG04450@3.71251,BJ@6.34103,GM12878@8.98175,H1HESC@32.1103,HELAS3@16.3522,HEPG2@24.7833,HMEC@12.5901,HSMM@4.01396,HUVEC@14.2117,K562@22.1262,MCF7@26.0842,NHEK@10.4929,NHLF@5.41315,SKNSHRA@7.15132, 0 0 0 0 ENSG00000137700.10 ENST00000524428.1 chr11:118895620-118900079 6 1520 2929 exonic 32.16 0 0,1,1 0 0,1,1 321.186184210526 64.9354728576306 99.58 446.261184210526 72.9440081939228 101.413 432.727631578947 63.1389552748378 469.278 0 0 chimp,cow,dog,elephant,guinea_pig,horse,human,macaque,marmoset,mouse,opossum,orangutan,panda,pig,rat, antisense retained_intron A549@6.36022,AG04450@3.71251,BJ@6.34103,GM12878@8.98175,H1HESC@32.1103,HELAS3@16.3522,HEPG2@24.7833,HMEC@12.5901,HSMM@4.01396,HUVEC@14.2117,K562@22.1262,MCF7@26.0842,NHEK@10.4929,NHLF@5.41315,SKNSHRA@7.15132, 0 0 0 0 ENSG00000137700.10 ENST00000525372.1 chr11:118895620-118900079 8 1380 3065 exonic 28.56 0 0,1,1 0 0,1,1 395.252173913044 42.7980424143556 99.58 504.583333333333 63.2730831973899 101.413 488.607971014493 54.4133768352366 469.278 0 0 cat,chimp,cow,dog,elephant,guinea_pig,horse,human,macaque,marmoset,mouse,opossum,panda,pig,rabbit,rat, antisense retained_intron A549@6.36022,AG04450@3.71251,BJ@6.34103,GM12878@8.98175,H1HESC@32.1103,HELAS3@16.3522,HEPG2@24.7833,HMEC@12.5901,HSMM@4.01396,HUVEC@14.2117,K562@22.1262,MCF7@26.0842,NHEK@10.4929,NHLF@5.41315,SKNSHRA@7.15132, 0 0 0 0 ENSG00000137700.10 ENST00000525039.1 chr11:118895620-118901598 11 1769 4189 exonic 28.06 0 0,1,1 1 0,1,1 304.12266817411 56.7736930054906 0 439.053137365743 54.4740988302698 5.427 432.602600339175 45.0740033420864 2.668 0 0 cat,chimp,cow,dog,elephant,guinea_pig,horse,human,macaque,marmoset,mouse,panda,pig,rabbit,rat, antisense antisense A549@6.36022,AG04450@3.71251,BJ@6.34103,GM12878@8.98175,H1HESC@32.1103,HELAS3@16.3522,HEPG2@24.7833,HMEC@12.5901,HSMM@4.01396,HUVEC@14.2117,K562@22.1262,MCF7@26.0842,NHEK@10.4929,NHLF@5.41315,SKNSHRA@7.15132, 0 0 0 0 ENSG00000137700.10 ENST00000529510.1 chr11:118895862-118900097 5 845 3382 exonic 30.34 0 0,1,1 0 0,1,1 358.631952662722 92.1454760496748 99.58 485.760946745562 111.676818450621 101.137 494.923076923077 101.894736842105 402.867 0 0 cat,chimp,cow,dog,elephant,guinea_pig,horse,human,macaque,marmoset,mouse,orangutan,panda,pig,rabbit,rat, antisense antisense A549@6.36022,AG04450@3.71251,BJ@6.34103,GM12878@8.98175,H1HESC@32.1103,HELAS3@16.3522,HEPG2@24.7833,HMEC@12.5901,HSMM@4.01396,HUVEC@14.2117,K562@22.1262,MCF7@26.0842,NHEK@10.4929,NHLF@5.41315,SKNSHRA@7.15132, 0 0 0 0 ENSG00000137700.10 ENST00000532888.1 chr11:118897376-118900278 5 1350 1544 intergenic 7.24 0 0,1,1 1 0,1,1 280.482222222222 18.3555699481865 62.91 357.253333333333 52.4682642487047 49.706 356.904444444444 51.5641191709845 43.634 0 0 cat,chimp,cow,dog,elephant,guinea_pig,horse,human,macaque,marmoset,orangutan,panda,pig,rabbit, antisense retained_intron A549@6.36022,AG04450@3.71251,BJ@6.34103,GM12878@8.98175,H1HESC@32.1103,HELAS3@16.3522,HEPG2@24.7833,HMEC@12.5901,HSMM@4.01396,HUVEC@14.2117,K562@22.1262,MCF7@26.0842,NHEK@10.4929,NHLF@5.41315,SKNSHRA@7.15132, 0 0 0 0 ENSG00000137700.10 ENST00000526626.1 chr11:118897664-118900278 3 731 1879 intergenic 16.78 0 0,1,1 1 0,1,1 327.258549931601 70.2517296434274 62.91 449.439124487004 112.128791910591 49.706 455.75512995896 109.357637040979 43.634 0 0 cat,chimp,cow,dog,elephant,guinea_pig,horse,human,macaque,marmoset,mouse,opossum,orangutan,panda,pig,rabbit,rat, antisense antisense A549@6.36022,AG04450@3.71251,BJ@6.34103,GM12878@8.98175,H1HESC@32.1103,HELAS3@16.3522,HEPG2@24.7833,HMEC@12.5901,HSMM@4.01396,HUVEC@14.2117,K562@22.1262,MCF7@26.0842,NHEK@10.4929,NHLF@5.41315,SKNSHRA@7.15132, 0 0 0 0 ENSG00000137700.10 ENST00000525787.1 chr11:118898522-118900374 2 1056 794 intergenic 31.65 0 0,0,1 1 0,1,1 233.750946969697 9.22040302267003 52.488 324.713068181818 34.5465994962217 34.603 326.223484848485 35.5931989924433 30.926 0 0 chimp,cow,dog,elephant,guinea_pig,horse,human,macaque,marmoset,mouse,opossum,orangutan,panda,pig,rabbit,rat, antisense retained_intron A549@6.36022,AG04450@3.71251,BJ@6.34103,GM12878@8.98175,H1HESC@32.1103,HELAS3@16.3522,HEPG2@24.7833,HMEC@12.5901,HSMM@4.01396,HUVEC@14.2117,K562@22.1262,MCF7@26.0842,NHEK@10.4929,NHLF@5.41315,SKNSHRA@7.15132, 0 0 0 0 ENSG00000137700.10 ENST00000534384.1 chr11:118898951-118900650 3 551 1144 intergenic -7.09 0 0,1,1 0 0,1,1 297.682395644283 36.6424825174825 29.856 399.511796733212 61.3802447552448 19.358 420.317604355717 54.4903846153846 15.892 0 0 cat,chimp,cow,dog,elephant,guinea_pig,human,macaque,marmoset,mouse,opossum,orangutan,panda,pig,rabbit,rat, antisense antisense A549@6.36022,AG04450@3.71251,BJ@6.34103,GM12878@8.98175,H1HESC@32.1103,HELAS3@16.3522,HEPG2@24.7833,HMEC@12.5901,HSMM@4.01396,HUVEC@14.2117,K562@22.1262,MCF7@26.0842,NHEK@10.4929,NHLF@5.41315,SKNSHRA@7.15132, 0 0 0 0 ENSG00000255114.1 ENST00000531886.1 chr11:118914899-118916205 2 665 639 exonic -27.11 0 1,1,1 0 0,0,0 77.5443609022556 21.7339593114241 0 111.069172932331 31.7120500782473 0 107.557894736842 22.5446009389671 0 0 0 cat,chimp,cow,dog,elephant,horse,human,macaque,mouse,orangutan,panda,pig,rat, antisense antisense A549@0.0073955,AG04450@0.0152565,BJ@0.007319,GM12878@0.003514,H1HESC@0.0087265,HELAS3@0.01602,HEPG2@0.012777,HMEC@0,HSMM@0.006835,HUVEC@0,K562@0.004014,MCF7@0.0136035,NHEK@0.0132223,NHLF@0,SKNSHRA@0.027248, 0 0 0 0 ENSG00000160695.8 ENST00000531528.1 chr11:118938403-118952688 16 3296 10959 intergenic 224.75 0 0,0,1 1 0,1,1 389.898361650485 16.5492289442467 0 484.705400485437 9.61100465370928 0 478.233313106796 9.2945524226663 0 0 0 cat,chimp,cow,dog,elephant,guinea_pig,horse,human,macaque,marmoset,mouse,orangutan,panda,pig,rabbit,rat, antisense antisense A549@2.36032,AG04450@5.36196,BJ@3.94043,GM12878@3.48996,H1HESC@3.92943,HELAS3@4.86777,HEPG2@5.35236,HMEC@4.03935,HSMM@6.27268,HUVEC@7.35265,K562@6.25449,MCF7@12.3623,NHEK@5.49445,NHLF@7.48234,SKNSHRA@7.7829, 0 0 0 0 ENSG00000160695.8 ENST00000300793.6 chr11:118938493-118952686 17 3201 10960 intergenic 258.28 0 1,1,1 1 0,1,1 401.024367385192 16.4887773722628 0 498.29272102468 9.5095802919708 1.89 491.384567322712 9.24151459854015 2.191 0 0 cat,chimp,cow,dog,elephant,guinea_pig,horse,human,macaque,marmoset,mouse,orangutan,panda,pig,rabbit,rat, antisense antisense A549@2.36032,AG04450@5.36196,BJ@3.94043,GM12878@3.48996,H1HESC@3.92943,HELAS3@4.86777,HEPG2@5.35236,HMEC@4.03935,HSMM@6.27268,HUVEC@7.35265,K562@6.25449,MCF7@12.3623,NHEK@5.49445,NHLF@7.48234,SKNSHRA@7.7829, 0 0 0 0 ENSG00000160695.8 ENST00000527798.1 chr11:118938532-118952677 16 3371 10744 intergenic 224.75 0 1,1,1 1 0,1,1 383.67813705132 15.5609642591214 1.242 475.591515870661 8.51005212211467 7.707 469.615544348858 7.93047282204021 9.134 0 0 cat,chimp,cow,dog,elephant,guinea_pig,horse,human,macaque,marmoset,mouse,orangutan,panda,pig,rabbit,rat, antisense antisense A549@2.36032,AG04450@5.36196,BJ@3.94043,GM12878@3.48996,H1HESC@3.92943,HELAS3@4.86777,HEPG2@5.35236,HMEC@4.03935,HSMM@6.27268,HUVEC@7.35265,K562@6.25449,MCF7@12.3623,NHEK@5.49445,NHLF@7.48234,SKNSHRA@7.7829, 0 0 0 0 ENSG00000160695.8 ENST00000529838.1 chr11:118938534-118952674 13 3338 10778 intergenic 88.33 0 1,1,1 1 0,1,1 371.244757339724 20.4797736129152 2.07 453.219892150989 17.0614214139915 8.801 444.469143199521 17.3218593431063 10.354 0 0 cat,chimp,cow,dog,horse,human,marmoset,mouse,orangutan,panda,pig,rabbit,rat, antisense retained_intron A549@2.36032,AG04450@5.36196,BJ@3.94043,GM12878@3.48996,H1HESC@3.92943,HELAS3@4.86777,HEPG2@5.35236,HMEC@4.03935,HSMM@6.27268,HUVEC@7.35265,K562@6.25449,MCF7@12.3623,NHEK@5.49445,NHLF@7.48234,SKNSHRA@7.7829, 0 0 0 0 ENSG00000160695.8 ENST00000443691.2 chr11:118938780-118952681 17 3124 10745 intergenic 235.63 0 0,0,1 0 0,1,1 387.975672215109 15.6007445323406 83.214 484.139564660692 8.56621684504421 97.185 477.429257362356 7.98296882270824 99.613 0 0 cat,chimp,cow,dog,elephant,guinea_pig,horse,human,macaque,marmoset,mouse,orangutan,panda,pig,rabbit,rat, antisense antisense A549@2.36032,AG04450@5.36196,BJ@3.94043,GM12878@3.48996,H1HESC@3.92943,HELAS3@4.86777,HEPG2@5.35236,HMEC@4.03935,HSMM@6.27268,HUVEC@7.35265,K562@6.25449,MCF7@12.3623,NHEK@5.49445,NHLF@7.48234,SKNSHRA@7.7829, 0 0 0 0 ENSG00000160695.8 ENST00000529545.1 chr11:118940263-118941494 2 574 655 intergenic 6.37 0 0,0,0 0 0,1,1 138.810104529617 19.3954198473282 134.597 193.386759581882 10.5297709923664 175.53 181.949477351916 13.5068702290076 173.912 0 0 chimp,cow,dog,elephant,guinea_pig,human,macaque,marmoset,orangutan,rabbit, antisense retained_intron A549@2.36032,AG04450@5.36196,BJ@3.94043,GM12878@3.48996,H1HESC@3.92943,HELAS3@4.86777,HEPG2@5.35236,HMEC@4.03935,HSMM@6.27268,HUVEC@7.35265,K562@6.25449,MCF7@12.3623,NHEK@5.49445,NHLF@7.48234,SKNSHRA@7.7829, 0 0 0 0 ENSG00000160695.8 ENST00000526829.1 chr11:118942742-118947638 2 1950 2944 intergenic -0.10 0 0,0,0 0 0,1,1 95.5969230769231 1.99592391304348 153.686 136.366153846154 2.22520380434783 155.396 131.837948717949 4.11854619565217 141.644 1 1 chimp,human,macaque,marmoset,orangutan, antisense retained_intron A549@2.36032,AG04450@5.36196,BJ@3.94043,GM12878@3.48996,H1HESC@3.92943,HELAS3@4.86777,HEPG2@5.35236,HMEC@4.03935,HSMM@6.27268,HUVEC@7.35265,K562@6.25449,MCF7@12.3623,NHEK@5.49445,NHLF@7.48234,SKNSHRA@7.7829, 0 0 0 0 ENSG00000160695.8 ENST00000530809.1 chr11:118944532-118948357 3 539 3282 intergenic 2.00 0 0,0,0 0 0,1,1 376.191094619666 1.52955514929921 112.436 461.376623376623 2.06124314442413 172.784 501.441558441558 3.1066422912858 158.067 0 0 cat,chimp,cow,dog,elephant,guinea_pig,horse,human,macaque,marmoset,mouse,opossum,orangutan,panda,pig,rabbit,rat, antisense antisense A549@2.36032,AG04450@5.36196,BJ@3.94043,GM12878@3.48996,H1HESC@3.92943,HELAS3@4.86777,HEPG2@5.35236,HMEC@4.03935,HSMM@6.27268,HUVEC@7.35265,K562@6.25449,MCF7@12.3623,NHEK@5.49445,NHLF@7.48234,SKNSHRA@7.7829, 0 0 0 0 ENSG00000160695.8 ENST00000534551.1 chr11:118947730-118949039 4 581 722 intergenic 2.00 0 0,1,1 0 0,1,1 387.320137693632 11.2423822714681 54.784 455.917383820998 11.4459833795014 67.174 457.253012048193 10.2908587257618 76.239 0 0 cat,chimp,cow,dog,elephant,guinea_pig,horse,human,macaque,marmoset,mouse,opossum,orangutan,panda,pig,rabbit,rat, antisense antisense A549@2.36032,AG04450@5.36196,BJ@3.94043,GM12878@3.48996,H1HESC@3.92943,HELAS3@4.86777,HEPG2@5.35236,HMEC@4.03935,HSMM@6.27268,HUVEC@7.35265,K562@6.25449,MCF7@12.3623,NHEK@5.49445,NHLF@7.48234,SKNSHRA@7.7829, 0 0 0 0 ENSG00000160695.8 ENST00000524454.1 chr11:118949892-118952675 2 624 2157 intergenic 0.69 0 0,1,1 0 0,1,1 274.11858974359 67.8683356513676 278.93 323.230769230769 68.0050996754752 280.162 316.899038461539 67.2610106629578 283.642 0 0 cat,chimp,cow,dog,elephant,guinea_pig,horse,human,macaque,marmoset,orangutan,panda,pig,rabbit,rat, antisense antisense A549@2.36032,AG04450@5.36196,BJ@3.94043,GM12878@3.48996,H1HESC@3.92943,HELAS3@4.86777,HEPG2@5.35236,HMEC@4.03935,HSMM@6.27268,HUVEC@7.35265,K562@6.25449,MCF7@12.3623,NHEK@5.49445,NHLF@7.48234,SKNSHRA@7.7829, 0 0 0 0 ENSG00000254561.1 ENST00000532153.1 chr11:119479135-119529994 7 4469 46378 exonic 0.55 0 0,0,0 0 0,1,0 5.44170955471023 5.72821165207642 29.56 21.917207428955 7.77873129501057 33.428 26.0727232042963 9.36771745224029 34.163 0 1 chimp,human,orangutan, antisense antisense A549@0.000617,AG04450@0,BJ@0,GM12878@0.001494,H1HESC@0.026328,HELAS3@0.0093255,HEPG2@0.0049485,HMEC@0.000915,HSMM@0.001379,HUVEC@0.0023425,K562@0.001218,MCF7@0.0023515,NHEK@0,NHLF@0,SKNSHRA@0.0144325, 0 0 0 0 ENSG00000254854.1 ENST00000533253.1 chr11:119600293-119610333 4 519 9515 intergenic 8.85 0 0,1,1 1 0,0,0 57.271676300578 39.049605885444 233.494 13.5761078998073 27.1799264319496 296.239 36.131021194605 28.0214398318445 276.201 0 0 cat,chimp,elephant,horse,human,macaque,marmoset,mouse,orangutan,panda, antisense antisense A549@0.304818,AG04450@0.025931,BJ@0.0757695,GM12878@0.307586,H1HESC@0.421967,HELAS3@0.091001,HEPG2@0,HMEC@0.281848,HSMM@0.0165855,HUVEC@0.045751,K562@0,MCF7@0.164525,NHEK@0.128258,NHLF@0.0111095,SKNSHRA@0.394331, 0 0 0 0 ENSG00000254863.1 ENST00000534055.1 chr11:119858663-119859543 2 516 362 intergenic 1.34 0 0,0,0 0 0,0,0 0 24.9171270718232 122.754 0 0 77.755 0 0 90.771 1 1 chimp,human,macaque,marmoset,orangutan, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0.003969,NHEK@0,NHLF@0,SKNSHRA@0, 160 2 0 0 ENSG00000254863.1 ENST00000526934.1 chr11:119859374-119865418 3 476 5564 intergenic -0.84 0 0,0,0 0 0,0,0 183.455882352941 14.0832135154565 48.618 155.886554621849 5.34094176851186 10.762 164.983193277311 8.46117900790798 21.06 0 0 cat,chimp,elephant,guinea_pig,horse,human,macaque,marmoset,mouse,orangutan,pig, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0.003969,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000254863.1 ENST00000524708.1 chr11:119859473-119865746 3 461 5808 intergenic -4.27 0 0,0,1 0 0,0,0 75.7700650759219 22.512741046832 107.102 7.00650759219089 17.3362603305785 57.201 15.7483731019523 20.3770661157025 62.224 0 0 cat,chimp,elephant,horse,human,macaque,marmoset,orangutan,panda,pig,rabbit, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0.003969,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000246790.2 ENST00000501964.1 chr11:121318040-121323722 2 2906 2774 intronic 5.13 0 0,1,0 0 0,0,0 52.4766001376463 115.880677721702 91.346 25.8971094287681 80.3846431146359 23.663 31.2567102546456 74.428622927181 32.437 0 0 horse,human,macaque,orangutan,panda, lincRNA processed_transcript A549@0,AG04450@0.0065935,BJ@0,GM12878@1.58109,H1HESC@0.053505,HELAS3@0.128645,HEPG2@0.548998,HMEC@0,HSMM@0.0051465,HUVEC@0,K562@0,MCF7@0.0384765,NHEK@0.000878,NHLF@0,SKNSHRA@0.00078, 0 0 0 0 ENSG00000246790.2 ENST00000529160.1 chr11:121320405-121323628 2 447 2774 intronic 5.13 0 0,1,0 0 0,0,0 117.711409395973 115.880677721702 132.236 37.3020134228188 80.3846431146359 31.462 54.2527964205817 74.428622927181 40.793 0 0 cat,chimp,dog,elephant,human,mouse,orangutan,pig, lincRNA processed_transcript A549@0,AG04450@0.0065935,BJ@0,GM12878@1.58109,H1HESC@0.053505,HELAS3@0.128645,HEPG2@0.548998,HMEC@0,HSMM@0.0051465,HUVEC@0,K562@0,MCF7@0.0384765,NHEK@0.000878,NHLF@0,SKNSHRA@0.00078, 0 0 0 0 ENSG00000255248.1 ENST00000530955.1 chr11:121899063-121972410 2 745 72600 intergenic 3.48 0 0,1,1 0 0,0,0 252.222818791946 63.9992561983471 511.209 165.681879194631 51.0523691460055 273.494 172.128859060403 63.7166115702479 279.32 0 0 cat,chimp,cow,dog,guinea_pig,horse,human,macaque,marmoset,mouse,orangutan,panda,pig,rabbit,rat, processed_transcript processed_transcript A549@1.63707,AG04450@32.7345,BJ@28.7946,GM12878@0,H1HESC@0.107786,HELAS3@1.97949,HEPG2@0.279703,HMEC@3.90544,HSMM@12.2797,HUVEC@1.63508,K562@0,MCF7@0,NHEK@2.18279,NHLF@25.7651,SKNSHRA@6.96401, 0 0 0 0 ENSG00000255248.1 ENST00000532319.1 chr11:121936268-121971156 2 948 33938 intergenic 7.97 0 0,1,1 1 0,0,0 38.4050632911392 102.040249867405 458.079 7.75 80.9946962107372 171.002 10.4272151898734 81.1983322529318 177.388 1 1 chimp,human,macaque,marmoset,orangutan, processed_transcript processed_transcript A549@1.63707,AG04450@32.7345,BJ@28.7946,GM12878@0,H1HESC@0.107786,HELAS3@1.97949,HEPG2@0.279703,HMEC@3.90544,HSMM@12.2797,HUVEC@1.63508,K562@0,MCF7@0,NHEK@2.18279,NHLF@25.7651,SKNSHRA@6.96401, 0 0 0 0 ENSG00000254446.1 ENST00000531470.1 chr11:121939642-121940864 3 469 749 intergenic 1.09 0 0,0,0 0 0,0,0 129.654584221748 53.0307076101469 133.2 207.89552238806 145.833110814419 178.585 170.266524520256 151.969292389853 167.838 0 0 cat,chimp,cow,dog,elephant,guinea_pig,horse,human,macaque,marmoset,opossum,orangutan,panda,pig,rabbit,rat, lincRNA lincRNA A549@0.0229115,AG04450@0.540555,BJ@1.45185,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0.02159,HSMM@0.0129685,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0.035652,SKNSHRA@0.19269, 0 0 0 0 ENSG00000255248.1 ENST00000531381.1 chr11:121959811-121972886 2 3368 9705 intergenic 0.92 1 0,1,1 0 0,0,0 205.662410926366 223.537248840804 183.123 121.185570071259 162.508706852138 68.325 115.970308788599 163.67552807831 93.085 0 0 cat,chimp,cow,dog,elephant,guinea_pig,horse,human,macaque,orangutan,panda,pig, processed_transcript processed_transcript A549@1.63707,AG04450@32.7345,BJ@28.7946,GM12878@0,H1HESC@0.107786,HELAS3@1.97949,HEPG2@0.279703,HMEC@3.90544,HSMM@12.2797,HUVEC@1.63508,K562@0,MCF7@0,NHEK@2.18279,NHLF@25.7651,SKNSHRA@6.96401, 0 0 0 0 ENSG00000255248.1 ENST00000529823.1 chr11:121959814-121972874 2 3332 9726 intergenic 0.92 1 0,0,1 0 0,0,0 202.388655462185 223.965761875386 188.895 118.784513805522 163.170470902735 67.339 114.529711884754 163.977277400781 92.379 0 0 cat,chimp,cow,dog,elephant,guinea_pig,horse,human,macaque,orangutan,panda,pig, processed_transcript processed_transcript A549@1.63707,AG04450@32.7345,BJ@28.7946,GM12878@0,H1HESC@0.107786,HELAS3@1.97949,HEPG2@0.279703,HMEC@3.90544,HSMM@12.2797,HUVEC@1.63508,K562@0,MCF7@0,NHEK@2.18279,NHLF@25.7651,SKNSHRA@6.96401, 0 0 0 0 ENSG00000255248.1 ENST00000524376.1 chr11:121959818-121971155 2 2682 8653 intergenic 0.93 1 0,1,1 1 0,0,0 73.7665920954512 194.724719750376 457.86 24.8486204325131 162.883970877152 170.909 23.8023862788963 162.723332948111 177.385 0 0 cat,chimp,cow,dog,elephant,guinea_pig,horse,human,macaque,orangutan,panda,pig, processed_transcript processed_transcript A549@1.63707,AG04450@32.7345,BJ@28.7946,GM12878@0,H1HESC@0.107786,HELAS3@1.97949,HEPG2@0.279703,HMEC@3.90544,HSMM@12.2797,HUVEC@1.63508,K562@0,MCF7@0,NHEK@2.18279,NHLF@25.7651,SKNSHRA@6.96401, 0 0 0 0 ENSG00000255248.1 ENST00000528986.1 chr11:121959818-121971737 2 3285 8632 intergenic 0.92 1 0,0,1 0 0,0,0 137.520852359209 194.171802594995 627.102 63.8888888888889 162.139249304912 326.579 61.9768645357686 162.381024096386 325.387 0 0 cat,chimp,cow,dog,elephant,guinea_pig,horse,human,macaque,orangutan,panda,pig, processed_transcript processed_transcript A549@1.63707,AG04450@32.7345,BJ@28.7946,GM12878@0,H1HESC@0.107786,HELAS3@1.97949,HEPG2@0.279703,HMEC@3.90544,HSMM@12.2797,HUVEC@1.63508,K562@0,MCF7@0,NHEK@2.18279,NHLF@25.7651,SKNSHRA@6.96401, 0 0 0 0 ENSG00000255248.1 ENST00000531071.1 chr11:121961763-121972405 3 967 9671 intergenic -3.91 1 0,1,1 0 0,0,0 347.600827300931 222.59342363768 514.764 160.827300930714 162.72536449178 276.519 159.519131334023 163.532623306794 281.2 0 0 cat,chimp,cow,dog,elephant,guinea_pig,horse,human,macaque,marmoset,orangutan,panda,pig,rabbit, processed_transcript processed_transcript A549@1.63707,AG04450@32.7345,BJ@28.7946,GM12878@0,H1HESC@0.107786,HELAS3@1.97949,HEPG2@0.279703,HMEC@3.90544,HSMM@12.2797,HUVEC@1.63508,K562@0,MCF7@0,NHEK@2.18279,NHLF@25.7651,SKNSHRA@6.96401, 0 0 0 0 ENSG00000255248.1 ENST00000534195.1 chr11:121961962-121975877 2 584 13329 intergenic -1.63 1 0,0,1 0 0,0,0 321.431506849315 246.099857453672 257.666 118.412671232877 173.97666741691 184.172 82.3013698630137 176.249080951309 178.109 0 0 cat,chimp,cow,dog,elephant,guinea_pig,horse,human,macaque,marmoset,orangutan,panda,pig,rabbit, processed_transcript processed_transcript A549@1.63707,AG04450@32.7345,BJ@28.7946,GM12878@0,H1HESC@0.107786,HELAS3@1.97949,HEPG2@0.279703,HMEC@3.90544,HSMM@12.2797,HUVEC@1.63508,K562@0,MCF7@0,NHEK@2.18279,NHLF@25.7651,SKNSHRA@6.96401, 0 0 0 0 ENSG00000255248.1 ENST00000532890.1 chr11:121961993-121972394 3 705 9692 intergenic -3.91 1 0,1,1 0 0,0,0 453.116312056738 223.02548493603 522.585 197.185815602837 163.388980602559 283.174 199.860992907801 163.835740817169 287.408 0 0 cat,chimp,cow,dog,elephant,guinea_pig,horse,human,macaque,marmoset,mouse,orangutan,panda,rat, processed_transcript processed_transcript A549@1.63707,AG04450@32.7345,BJ@28.7946,GM12878@0,H1HESC@0.107786,HELAS3@1.97949,HEPG2@0.279703,HMEC@3.90544,HSMM@12.2797,HUVEC@1.63508,K562@0,MCF7@0,NHEK@2.18279,NHLF@25.7651,SKNSHRA@6.96401, 0 0 0 0 ENSG00000255248.1 ENST00000532315.1 chr11:121962125-121976650 2 1173 13350 intergenic 1.79 0 0,0,1 0 0,0,0 367.135549872123 246.376554307116 0 208.012787723785 174.44074906367 0 185.399829497016 176.449138576779 2.331 0 0 cow,dog,elephant,guinea_pig,horse,human,macaque,marmoset,mouse,opossum,orangutan,panda,pig,rabbit,rat, processed_transcript processed_transcript A549@1.63707,AG04450@32.7345,BJ@28.7946,GM12878@0,H1HESC@0.107786,HELAS3@1.97949,HEPG2@0.279703,HMEC@3.90544,HSMM@12.2797,HUVEC@1.63508,K562@0,MCF7@0,NHEK@2.18279,NHLF@25.7651,SKNSHRA@6.96401, 0 0 0 0 ENSG00000255248.1 ENST00000530072.1 chr11:121971386-121972394 2 590 416 intergenic -2.86 0 0,1,1 0 0,0,0 530.740677966102 509.322115384615 522.585 309.710169491525 88.7379807692308 283.174 326.369491525424 104.757211538462 287.408 0 0 cat,chimp,cow,dog,elephant,guinea_pig,horse,human,macaque,marmoset,mouse,orangutan,panda,pig,rabbit,rat, processed_transcript processed_transcript A549@1.63707,AG04450@32.7345,BJ@28.7946,GM12878@0,H1HESC@0.107786,HELAS3@1.97949,HEPG2@0.279703,HMEC@3.90544,HSMM@12.2797,HUVEC@1.63508,K562@0,MCF7@0,NHEK@2.18279,NHLF@25.7651,SKNSHRA@6.96401, 0 0 0 0 ENSG00000255248.1 ENST00000531629.1 chr11:121971617-121972394 2 560 215 intergenic -3.91 0 0,1,0 0 0,0,0 476.919642857143 711 522.585 294.882142857143 41.7767441860465 283.174 298.471428571429 77.5162790697674 287.408 0 0 cat,chimp,cow,dog,guinea_pig,horse,human,macaque,marmoset,mouse,orangutan,panda,pig,rabbit,rat, processed_transcript processed_transcript A549@1.63707,AG04450@32.7345,BJ@28.7946,GM12878@0,H1HESC@0.107786,HELAS3@1.97949,HEPG2@0.279703,HMEC@3.90544,HSMM@12.2797,HUVEC@1.63508,K562@0,MCF7@0,NHEK@2.18279,NHLF@25.7651,SKNSHRA@6.96401, 0 0 0 0 ENSG00000255090.1 ENST00000532350.1 chr11:122026130-122073770 3 570 47066 intergenic -4.15 0 0,0,0 0 0,0,0 255.652631578947 44.6011558237369 47.433 126.10350877193 35.3778311307525 42 96.4859649122807 39.5776781540815 34.767 0 0 chimp,cow,dog,guinea_pig,horse,human,macaque,marmoset,mouse,opossum,orangutan,panda,pig,rat, processed_transcript processed_transcript A549@0.785281,AG04450@3.4307,BJ@2.51262,GM12878@0,H1HESC@0.0329185,HELAS3@2.70266,HEPG2@1.01103,HMEC@0.614547,HSMM@0.677017,HUVEC@0.25709,K562@0,MCF7@0,NHEK@0.811039,NHLF@2.47144,SKNSHRA@0.347405, 0 0 0 0 ENSG00000255090.1 ENST00000533109.1 chr11:122026259-122051108 2 145 24702 intergenic 0 0 0,1,0 0 0,0,0 0 50.8032547971824 30.176 65.3448275862069 33.1884057971015 31.629 112.889655172414 40.9771273581087 33.794 0 0 chimp,dog,guinea_pig,horse,human,macaque,marmoset,orangutan,panda,rabbit, processed_transcript processed_transcript A549@0.785281,AG04450@3.4307,BJ@2.51262,GM12878@0,H1HESC@0.0329185,HELAS3@2.70266,HEPG2@1.01103,HMEC@0.614547,HSMM@0.677017,HUVEC@0.25709,K562@0,MCF7@0,NHEK@0.811039,NHLF@2.47144,SKNSHRA@0.347405, 0 0 0 0 ENSG00000255090.1 ENST00000534782.1 chr11:122026259-122073770 3 441 47066 intergenic -4.15 0 0,0,0 0 0,0,0 330.43537414966 44.6011558237369 47.433 158.920634920635 35.3778311307525 42 120.424036281179 39.5776781540815 34.767 0 0 chimp,cow,dog,guinea_pig,horse,human,macaque,marmoset,orangutan,panda,pig,rat, processed_transcript processed_transcript A549@0.785281,AG04450@3.4307,BJ@2.51262,GM12878@0,H1HESC@0.0329185,HELAS3@2.70266,HEPG2@1.01103,HMEC@0.614547,HSMM@0.677017,HUVEC@0.25709,K562@0,MCF7@0,NHEK@0.811039,NHLF@2.47144,SKNSHRA@0.347405, 0 0 0 0 ENSG00000255090.1 ENST00000534496.1 chr11:122051044-122073754 2 344 22364 intergenic -4.15 0 0,0,0 0 0,0,0 400.866279069767 37.7506707208013 55.257 158.002906976744 37.7961455911286 50.96 102.991279069767 38.0319263101413 40.377 0 0 cat,chimp,cow,dog,elephant,guinea_pig,horse,human,macaque,marmoset,mouse,orangutan,panda,pig,rat, processed_transcript processed_transcript A549@0.785281,AG04450@3.4307,BJ@2.51262,GM12878@0,H1HESC@0.0329185,HELAS3@2.70266,HEPG2@1.01103,HMEC@0.614547,HSMM@0.677017,HUVEC@0.25709,K562@0,MCF7@0,NHEK@0.811039,NHLF@2.47144,SKNSHRA@0.347405, 0 0 0 0 ENSG00000255090.1 ENST00000527474.1 chr11:122051046-122238681 4 955 186674 encompassing 6.16 0 0,0,0 0 0,0,0 245.346596858639 41.0149136998189 207.765 201.285863874346 29.4314848345244 156.042 229.571727748691 32.0822449832328 156.805 0 0 cat,chimp,cow,dog,elephant,guinea_pig,horse,human,macaque,marmoset,mouse,opossum,orangutan,panda,pig,rabbit,rat, processed_transcript processed_transcript A549@0.785281,AG04450@3.4307,BJ@2.51262,GM12878@0,H1HESC@0.0329185,HELAS3@2.70266,HEPG2@1.01103,HMEC@0.614547,HSMM@0.677017,HUVEC@0.25709,K562@0,MCF7@0,NHEK@0.811039,NHLF@2.47144,SKNSHRA@0.347405, 0 0 0 0 ENSG00000255090.1 ENST00000529804.1 chr11:122073472-122180159 3 465 106218 encompassing -4.04 0 0,0,0 0 0,0,0 403.193548387097 39.8228078103523 236.06 104.761290322581 30.2844433146924 98.703 106.023655913979 32.553371368318 67.283 0 0 cat,chimp,elephant,guinea_pig,horse,human,macaque,marmoset,orangutan,pig,rabbit,rat, processed_transcript processed_transcript A549@0.785281,AG04450@3.4307,BJ@2.51262,GM12878@0,H1HESC@0.0329185,HELAS3@2.70266,HEPG2@1.01103,HMEC@0.614547,HSMM@0.677017,HUVEC@0.25709,K562@0,MCF7@0,NHEK@0.811039,NHLF@2.47144,SKNSHRA@0.347405, 0 0 0 0 ENSG00000255090.1 ENST00000529733.1 chr11:122074217-122238580 3 581 163778 encompassing -1.59 0 0,0,0 0 0,0,0 86.1944922547332 41.1576463261244 269.88 56.9707401032702 28.4096337725457 205.869 85.8003442340792 31.565912393606 203.014 0 0 cat,chimp,cow,dog,elephant,guinea_pig,horse,human,macaque,marmoset,opossum,orangutan,panda,pig, processed_transcript processed_transcript A549@0.785281,AG04450@3.4307,BJ@2.51262,GM12878@0,H1HESC@0.0329185,HELAS3@2.70266,HEPG2@1.01103,HMEC@0.614547,HSMM@0.677017,HUVEC@0.25709,K562@0,MCF7@0,NHEK@0.811039,NHLF@2.47144,SKNSHRA@0.347405, 0 0 0 0 ENSG00000255090.1 ENST00000528381.1 chr11:122104970-122238523 3 551 132998 encompassing -1.59 0 0,0,1 0 0,0,0 66.3321234119782 43.9617813801712 284.025 53.1252268602541 29.3437570489782 210.016 82.5662431941924 32.8478548549602 207.733 0 0 cat,chimp,cow,dog,elephant,guinea_pig,horse,human,macaque,marmoset,opossum,orangutan,panda,pig, processed_transcript processed_transcript A549@0.785281,AG04450@3.4307,BJ@2.51262,GM12878@0,H1HESC@0.0329185,HELAS3@2.70266,HEPG2@1.01103,HMEC@0.614547,HSMM@0.677017,HUVEC@0.25709,K562@0,MCF7@0,NHEK@0.811039,NHLF@2.47144,SKNSHRA@0.347405, 0 0 0 0 ENSG00000255090.1 ENST00000526674.1 chr11:122162982-122293579 2 308 130287 encompassing 0 0 0,0,0 0 0,0,0 0 31.2412213037371 0 5.62987012987013 19.8120840912754 0 5.74675324675325 24.0251982162457 5.43 0 0 cat,chimp,elephant,horse,human,macaque,marmoset,orangutan,panda,rabbit, processed_transcript processed_transcript A549@0.785281,AG04450@3.4307,BJ@2.51262,GM12878@0,H1HESC@0.0329185,HELAS3@2.70266,HEPG2@1.01103,HMEC@0.614547,HSMM@0.677017,HUVEC@0.25709,K562@0,MCF7@0,NHEK@0.811039,NHLF@2.47144,SKNSHRA@0.347405, 0 0 0 0 ENSG00000255219.1 ENST00000526777.1 chr11:122165898-122178727 3 568 12257 intronic -6.32 0 0,0,0 0 0,0,0 80.4330985915493 36.7523863914498 0 66.1443661971831 20.5870115036306 0 173.917253521127 27.0908052541405 0 0 0 chimp,cow,elephant,guinea_pig,horse,human,macaque,marmoset,mouse,orangutan,pig,rabbit, antisense antisense A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0.031012,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000254710.1 ENST00000531681.1 chr11:123059510-123098985 5 696 38771 intronic -1.30 0 0,0,0 0 0,0,0 0 12.3793299115318 30.244 4.1566091954023 12.2586985117743 19.697 4.68965517241379 12.9277810734828 18.346 0 0 chimp,elephant,horse,human,macaque,marmoset,orangutan,rabbit, antisense antisense A549@0,AG04450@0,BJ@0.003452,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000254823.1 ENST00000527533.1 chr11:123184382-123185478 2 386 708 intergenic 2.63 0 0,0,0 0 0,0,0 0 0 0 0 0 17.048 0 0 21.092 1 1 chimp,human,macaque,marmoset,orangutan, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000254823.1 ENST00000527774.1 chr11:123184411-123185475 3 442 618 intergenic 2.63 0 0,0,0 0 0,0,0 0 0 0 0 0 17.048 0 0 21.092 1 1 chimp,human,macaque,marmoset,orangutan, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000255414.1 ENST00000525757.1 chr11:123325106-123331118 2 2469 3541 intergenic 2.09 0 0,1,0 0 0,0,0 2.28554070473876 0 0 0 0.50409488844959 0 4.52288375860672 0.5120022592488 0 0 1 chimp,human,macaque,orangutan, lincRNA processed_transcript A549@2.18276,AG04450@0.00421,BJ@0.025509,GM12878@0.321467,H1HESC@0.074527,HELAS3@2.79692,HEPG2@0.564095,HMEC@0.003314,HSMM@0,HUVEC@0.0410765,K562@0,MCF7@0.0016275,NHEK@0.0118163,NHLF@0,SKNSHRA@0.234998, 0 0 0 0 ENSG00000254467.1 ENST00000532961.1 chr11:123539207-123542345 2 664 2472 intergenic -7.12 0 0,1,0 0 0,0,0 0 0 8.05 0 1.02346278317152 0 0 1.80501618122977 0 0 1 chimp,human,macaque,orangutan, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0.0035195,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000255045.1 ENST00000531241.1 chr11:124614530-124616233 3 442 1257 exonic 2.76 0 1,1,1 0 0,0,0 33.10407239819 83.7549721559268 267.072 35.4434389140272 92.8782816229117 217.941 40.8868778280543 100.859188544153 206.138 0 0 cat,chimp,cow,dog,elephant,horse,human,macaque,marmoset,orangutan,pig,rabbit, antisense antisense A549@0.0700575,AG04450@0.0540275,BJ@0.027349,GM12878@0.184464,H1HESC@0,HELAS3@0.104483,HEPG2@0.0367785,HMEC@0.018403,HSMM@0,HUVEC@0.0588475,K562@0,MCF7@0.009036,NHEK@0.0144347,NHLF@0.043652,SKNSHRA@0.010215, 0 0 0 0 ENSG00000250073.2 ENST00000504932.2 chr11:124629025-124635832 2 1491 5314 intronic -0.24 0 0,1,1 0 0,0,0 0 26.8876552502823 0 2.94567404426559 37.3470079036507 18.882 2.18913480885312 36.6266465939029 20.288 0 0 cat,chimp,cow,dog,elephant,horse,human,macaque,marmoset,orangutan,panda,pig, lincRNA processed_transcript A549@0.217846,AG04450@0,BJ@0.001649,GM12878@0.379438,H1HESC@0,HELAS3@1.18174,HEPG2@0.185579,HMEC@0,HSMM@0,HUVEC@0.202304,K562@0.190533,MCF7@0.145787,NHEK@0,NHLF@0.0415195,SKNSHRA@0.0212565, 0 0 0 0 ENSG00000250073.2 ENST00000532579.1 chr11:124632327-124635257 2 676 2252 intergenic -0.24 0 1,1,1 1 0,0,0 0 4.20071047957371 95.979 0 16.2726465364121 91.142 0 17.6891651865009 86.778 0 0 cat,chimp,cow,dog,elephant,guinea_pig,horse,human,macaque,marmoset,orangutan,panda,pig, lincRNA processed_transcript A549@0.217846,AG04450@0,BJ@0.001649,GM12878@0.379438,H1HESC@0,HELAS3@1.18174,HEPG2@0.185579,HMEC@0,HSMM@0,HUVEC@0.202304,K562@0.190533,MCF7@0.145787,NHEK@0,NHLF@0.0415195,SKNSHRA@0.0212565, 0 0 0 0 ENSG00000245498.2 ENST00000499143.2 chr11:124670346-124704383 5 2881 31148 exonic 5.03 0 0,1,0 1 0,0,0 41.1357167650121 0.310774367535636 661.32 110.324887191947 0.855688968794144 608.561 12.745227351614 3.88179016309233 594.502 0 1 chimp,human,macaque, lincRNA non_coding A549@0.285747,AG04450@0.240816,BJ@0.157208,GM12878@0.460344,H1HESC@0.376313,HELAS3@0.279818,HEPG2@0.423737,HMEC@0.040382,HSMM@0.155695,HUVEC@0.119835,K562@0.058183,MCF7@0.183933,NHEK@0.0639117,NHLF@0.114973,SKNSHRA@0.771246, 0 0 0 0 ENSG00000245498.2 ENST00000529392.1 chr11:124670806-124676641 3 2789 3042 intergenic 5.78 0 0,0,1 0 0,0,0 0 0 479.9 1.2126210111151 0 456.498 3.63642882753675 1.99704142011834 417.502 0 1 chimp,human, lincRNA retained_intron A549@0.285747,AG04450@0.240816,BJ@0.157208,GM12878@0.460344,H1HESC@0.376313,HELAS3@0.279818,HEPG2@0.423737,HMEC@0.040382,HSMM@0.155695,HUVEC@0.119835,K562@0.058183,MCF7@0.183933,NHEK@0.0639117,NHLF@0.114973,SKNSHRA@0.771246, 0 0 0 0 ENSG00000254568.1 ENST00000524453.1 chr11:124753587-124757685 2 742 3354 exonic -5.03 0 0,0,1 0 0,0,0 0 78.9084675014908 0 30.0673854447439 83.8082886106142 1.785 31.0323450134771 72.6782945736434 4.896 1 1 chimp,human,macaque,marmoset,orangutan, antisense antisense A549@0.0248355,AG04450@0.215573,BJ@0.0636505,GM12878@0,H1HESC@0.068564,HELAS3@0,HEPG2@0.0137245,HMEC@0,HSMM@0.051199,HUVEC@0.056899,K562@0,MCF7@0,NHEK@0.0205893,NHLF@0,SKNSHRA@0.201018, 0 0 0 0 ENSG00000254880.1 ENST00000532316.1 chr11:125028357-125034505 3 583 5561 intergenic 11.49 0 0,0,0 0 0,0,0 104.716981132075 102.924474015465 353.03 58.0497427101201 60.3510160043158 381.497 52.3945111492281 59.1681352274771 359.31 0 0 chimp,cow,human,macaque,marmoset,mouse, lincRNA lincRNA A549@0,AG04450@0.0207395,BJ@0,GM12878@0,H1HESC@0.067247,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0.082652,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0.0133185,SKNSHRA@0, 0 0 0 0 ENSG00000254694.1 ENST00000532866.1 chr11:126078506-126078922 2 360 54 intronic 0 0 0,0,0 0 0,0,0 0 0 146.64 0 0 100.268 0 0 103.375 0 1 chimp,human,macaque,orangutan, antisense antisense A549@0.238088,AG04450@0.204593,BJ@0.11439,GM12878@0.900249,H1HESC@0.495316,HELAS3@1.00644,HEPG2@1.86178,HMEC@0.024777,HSMM@0.085366,HUVEC@0.734055,K562@0.794384,MCF7@0.642885,NHEK@0.188472,NHLF@0.0214955,SKNSHRA@0.217752, 0 0 0 0 ENSG00000254905.1 ENST00000533378.1 chr11:126162817-126164149 2 490 840 exonic -1.44 0 0,0,0 0 0,0,0 98.8530612244898 5.72261904761905 0 66.4122448979592 30.3321428571429 0 69.434693877551 27.127380952381 0 0 0 cat,chimp,elephant,human,macaque,marmoset,mouse,orangutan,panda, antisense antisense A549@0.091486,AG04450@0.111259,BJ@0.116522,GM12878@0.463531,H1HESC@0.654962,HELAS3@0.614376,HEPG2@0.54843,HMEC@0.925387,HSMM@0,HUVEC@0.218255,K562@0.114076,MCF7@0.566184,NHEK@0.104027,NHLF@0.019697,SKNSHRA@0.350993, 0 0 0 0 ENSG00000247445.1 ENST00000501321.1 chr11:126210853-126225431 2 1458 13118 intronic 1.87 0 1,1,1 1 0,0,0 0 12.1321847842659 78.145 1.96776406035665 19.0744015856076 80.91 3.09876543209877 21.1150327793871 83.785 0 1 chimp,human,macaque,marmoset, lincRNA lincRNA A549@0.876575,AG04450@1.33725,BJ@1.10832,GM12878@0.56758,H1HESC@0.500058,HELAS3@3.45519,HEPG2@0.876702,HMEC@0.595707,HSMM@0.607375,HUVEC@0.889181,K562@1.70752,MCF7@0.952835,NHEK@1.15131,NHLF@0.407563,SKNSHRA@1.71306, 0 0 0 0 ENSG00000247445.1 ENST00000499602.1 chr11:126220067-126225482 3 2286 3125 intergenic 1.24 0 1,1,1 1 0,0,0 0 22.80384 78.145 0.89238845144357 30.34976 78.87 0.906386701662292 29.3872 81.713 1 1 chimp,human,macaque,marmoset,orangutan, lincRNA lincRNA A549@0.876575,AG04450@1.33725,BJ@1.10832,GM12878@0.56758,H1HESC@0.500058,HELAS3@3.45519,HEPG2@0.876702,HMEC@0.595707,HSMM@0.607375,HUVEC@0.889181,K562@1.70752,MCF7@0.952835,NHEK@1.15131,NHLF@0.407563,SKNSHRA@1.71306, 0 0 0 0 ENSG00000254938.1 ENST00000530572.1 chr11:126790084-126810555 2 564 19905 intronic -4.73 0 0,0,0 0 0,0,0 40.6028368794326 13.3119819140919 0 109.13475177305 25.9335342878674 12.293 111.074468085106 27.2972117558402 12.885 0 0 cat,chimp,cow,dog,guinea_pig,horse,human,macaque,marmoset,mouse,opossum,orangutan,panda,pig,rabbit,rat, sense_intronic sense_intronic A549@0.142511,AG04450@0.127852,BJ@0.441306,GM12878@0,H1HESC@0.01691,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0.0045635,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000254960.1 ENST00000532988.1 chr11:126810642-126814984 3 489 3849 intronic 3.19 0 0,0,0 0 0,0,0 0 8.38425565081839 82.898 64.0633946830266 31.5370226032736 168.625 70.480572597137 35.247596778384 161.352 0 0 chimp,dog,elephant,guinea_pig,horse,human,macaque,marmoset,mouse,opossum,orangutan,rabbit, antisense antisense A549@0,AG04450@0,BJ@0.020427,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000218109.3 ENST00000525678.1 chr11:126872805-126875953 3 1765 1379 intergenic 12.12 0 0,1,0 0 0,1,0 68.9563739376771 9.01232777374909 44.216 97.5337110481587 30.6997824510515 57.035 100.573371104816 38.2422044960116 64.225 0 0 chimp,elephant,guinea_pig,horse,human,macaque,marmoset, processed_transcript processed_transcript A549@0.00788,AG04450@0,BJ@0.010138,GM12878@0,H1HESC@0.002858,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0.0011035,SKNSHRA@0, 0 0 0 0 ENSG00000255546.1 ENST00000530177.1 chr11:126891649-126923448 3 569 31226 intergenic -3.98 0 0,0,1 0 0,0,0 70.3690685413005 18.2114904246461 0 184.847100175747 28.653878178441 0 179.079086115993 32.5952731697944 0 0 0 cat,chimp,dog,elephant,guinea_pig,horse,human,macaque,marmoset,mouse,orangutan,panda,pig,rabbit,rat, lincRNA lincRNA A549@0.0388875,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0.0035945,NHEK@0.002308,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000255465.1 ENST00000531784.1 chr11:128485760-128491701 3 1156 4781 intergenic 6.08 0 0,0,0 0 0,0,0 0 3.60803179251203 117.177 41.6634948096886 7.14202049780381 41.924 55.2820069204152 9.8389458272328 47.968 0 0 cat,chimp,dog,elephant,horse,human,macaque,marmoset,orangutan,rabbit, lincRNA lincRNA A549@0,AG04450@0.002782,BJ@0.014797,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0.0023205, 0 0 0 0 ENSG00000255465.1 ENST00000532563.1 chr11:128490599-128491711 3 285 823 intergenic 0 0 0,0,0 0 0,0,0 0 0 117.177 18.5789473684211 0 41.669 26.1052631578947 0 46.908 0 0 chimp,elephant,human,macaque,marmoset,orangutan, lincRNA lincRNA A549@0,AG04450@0.002782,BJ@0.014797,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0.0023205, 0 0 0 0 ENSG00000254703.1 ENST00000526269.1 chr11:128561575-128565918 3 1287 3052 exonic 4.00 0 1,1,1 0 0,0,0 88.5205905205905 273.510812581914 36.823 84.1142191142191 263.409567496723 28.609 74.3193473193473 254.525884665793 37.725 0 0 chimp,cow,dog,elephant,guinea_pig,horse,human,macaque,marmoset,orangutan,panda,rabbit, antisense antisense A549@0,AG04450@0.094911,BJ@0.069558,GM12878@0.02127,H1HESC@0.0064325,HELAS3@0,HEPG2@0,HMEC@0.168229,HSMM@0,HUVEC@1.86989,K562@0,MCF7@0,NHEK@0.0198633,NHLF@0.028851,SKNSHRA@0.122425, 0 0 0 0 ENSG00000233220.3 ENST00000530583.1 chr11:129872833-129874251 1 1418 0 intergenic 7.33 0 0,1,0 0 0,1,0 109.983074753173 0 282.079 73.2023977433004 0 383.291 69.3772919605078 0 357.966 0 0 chimp,dog,elephant,human,macaque,marmoset,orangutan,panda, lincRNA non_coding A549@0.118201,AG04450@0.0401585,BJ@0.0618995,GM12878@0.283106,H1HESC@0.21436,HELAS3@0.335174,HEPG2@0.29325,HMEC@0.670848,HSMM@0.0592525,HUVEC@0.206684,K562@0.206997,MCF7@0.152958,NHEK@0.0238527,NHLF@0.022674,SKNSHRA@0.178182, 0 0 0 0 ENSG00000255658.1 ENST00000538996.1 chr11:130434325-130628495 3 568 193598 encompassing 3.65 0 0,0,0 0 0,0,0 0 13.3713106540357 0 0 14.8475294166262 1.84 489.887323943662 20.088363516152 1.944 0 0 NA lincRNA lincRNA A549@0.0096745,AG04450@0,BJ@0,GM12878@0,H1HESC@0.0447765,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 143 2 0 0 ENSG00000255455.1 ENST00000525716.1 chr11:130732054-130737889 2 3131 2702 intergenic 3.15 0 0,1,0 0 0,0,0 49.7764292558288 13.3234641006662 31.05 34.019801980198 12.1480384900074 5.736 33.1699137655701 12.8704663212435 21.099 0 0 chimp,elephant,human,macaque,orangutan, lincRNA lincRNA A549@0.702771,AG04450@1.51849,BJ@0.808476,GM12878@0.351097,H1HESC@0.442145,HELAS3@0.329029,HEPG2@0.08323,HMEC@0.253935,HSMM@0.425041,HUVEC@0.723813,K562@0.22238,MCF7@0.235812,NHEK@0.858136,NHLF@0.550177,SKNSHRA@1.53729, 0 0 0 0 ENSG00000236129.1 ENST00000441665.1 chr11:131056917-131059648 2 633 2096 intergenic 1.85 1 1,1,1 1 0,0,0 0 0 138.192 11.9320695102686 3.0949427480916 49.211 12.4944707740916 3.35257633587786 88.466 0 0 cat,chimp,dog,elephant,guinea_pig,human,macaque,marmoset,orangutan,panda,rabbit,rat, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0.400398,H1HESC@0.003267,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000227125.1 ENST00000447864.1 chr11:131074894-131085058 2 560 9602 intergenic 3.26 0 0,0,0 0 0,0,0 0 38.1779837533847 0 4.26785714285714 32.6913143095189 0 7.46071428571429 28.2017288064986 0 0 0 chimp,elephant,guinea_pig,horse,human,macaque,marmoset,orangutan,panda,pig, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000237612.1 ENST00000441638.1 chr11:131104433-131121711 2 567 16709 intergenic 3.97 0 0,0,0 0 0,0,0 0 38.5785504817763 0 6.66666666666667 41.0070620623616 3.92 6.8641975308642 44.3593273086361 8.509 0 0 chimp,human,macaque,marmoset,orangutan, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000231698.1 ENST00000416553.1 chr11:131123317-131170666 2 582 46765 intergenic -20.41 0 0,0,0 0 0,0,0 16.4948453608247 17.6768951138672 163.38 37.4054982817869 20.6942799101892 111.233 38.6134020618557 20.8016892975516 106.447 0 0 cat,chimp,cow,horse,human,macaque,marmoset,mouse,orangutan,rabbit,rat, lincRNA processed_transcript A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@35.8338,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0.008327,K562@0,MCF7@0.0035205,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000237654.1 ENST00000443319.1 chr11:131372653-131410510 3 429 37424 intronic 0 0 0,0,1 0 0,0,0 0 22.0500480974776 79.968 0 27.9011329628046 158.217 0 29.6198428815733 170.698 0 0 chimp,horse,human,macaque,marmoset,orangutan, antisense antisense A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0.0037755,HMEC@0,HSMM@0,HUVEC@0.000616,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000237654.1 ENST00000414466.1 chr11:131403751-131410761 8 4327 2669 intronic 8.39 0 0,0,1 0 0,0,0 12.6094291657037 0 79.968 25.3702334180726 0 158.217 27.618904552808 0 170.698 0 0 chimp,human,macaque,orangutan,panda, antisense antisense A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0.0037755,HMEC@0,HSMM@0,HUVEC@0.000616,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000237654.1 ENST00000414856.1 chr11:131406370-131410492 3 533 3585 intronic 1.04 1 0,0,0 0 0,0,0 0 8.45271966527197 79.968 0 19.9347280334728 158.217 0 20.5935843793584 170.698 0 0 chimp,cow,horse,human,macaque,marmoset,orangutan,panda,pig, antisense antisense A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0.0037755,HMEC@0,HSMM@0,HUVEC@0.000616,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000236082.1 ENST00000421650.1 chr11:131416556-131443494 2 147 26789 intronic 0 0 0,0,0 0 0,0,0 120.122448979592 37.3230430400538 0 0 35.3035947590429 1.912 0 41.5206987942812 2.008 0 0 chimp,cow,dog,human,macaque,marmoset,orangutan,rabbit, sense_intronic sense_intronic A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000238117.1 ENST00000419440.1 chr11:131747574-131767002 2 507 18919 intronic 13.34 0 0,0,1 0 0,0,0 30.8086785009862 29.6139330831439 202.007 46.1005917159763 29.7738252550346 193.688 54.9191321499014 31.3625984460067 228.238 0 0 cat,chimp,cow,elephant,guinea_pig,horse,human,macaque,marmoset,orangutan,panda,pig, antisense antisense A549@0,AG04450@0.022911,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0.168933,HSMM@0.132728,HUVEC@0,K562@0,MCF7@0.192012,NHEK@0.344852,NHLF@0.0572455,SKNSHRA@0, 0 0 0 0 ENSG00000224700.1 ENST00000446631.1 chr11:131850990-131854555 2 575 2988 intronic 0.98 0 0,1,0 0 0,0,0 0 48.9307228915663 0 7.13565217391304 50.2523427041499 0 14.1965217391304 53.5358099062918 0 0 0 cat,chimp,cow,dog,elephant,horse,human,macaque,marmoset,orangutan,panda, sense_intronic sense_intronic A549@0,AG04450@0.0821975,BJ@0.097437,GM12878@0,H1HESC@0.35094,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0.713137,HUVEC@0.0059825,K562@0,MCF7@0,NHEK@0.278367,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000238262.1 ENST00000421651.1 chr11:132154196-132154975 2 371 406 intronic 5.68 0 0,0,0 0 0,0,0 0 0 0 0 0 1.53 0 0 1.554 0 0 chimp,human,macaque,marmoset,orangutan,pig, sense_intronic sense_intronic A549@0,AG04450@0.0831275,BJ@0,GM12878@0,H1HESC@0.0931995,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000255371.1 ENST00000533260.1 chr11:132729140-132729972 2 396 434 intronic 2.92 0 0,0,0 0 0,0,0 0 0 47.538 44.3282828282828 0 21.785 69.7474747474747 0 26.036 0 0 cat,chimp,cow,elephant,guinea_pig,horse,human,macaque,marmoset,orangutan,panda,pig,rabbit, sense_intronic sense_intronic A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000254896.1 ENST00000533859.1 chr11:133229924-133235975 2 2934 3115 intronic 3.52 0 0,0,1 0 0,0,0 0 0 32.2 0 0.693418940609952 25.726 4.42399454669393 3.04173354735152 26.057 0 0 human, sense_intronic sense_intronic A549@0,AG04450@0,BJ@0,GM12878@0.019953,H1HESC@0.098202,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000255258.1 ENST00000526254.1 chr11:133653566-133680271 3 972 25729 intergenic 4.40 0 0,1,1 0 0,0,0 33.9259259259259 28.9204788371099 178.13 38.7736625514403 28.1828287146799 65.548 38.1183127572016 29.6961794084496 37.53 0 0 chimp,horse,human,macaque,marmoset,orangutan, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0.0016055, 0 0 0 0 ENSG00000255258.1 ENST00000530621.1 chr11:133667935-133680395 2 2824 9634 intergenic 3.45 0 0,0,0 0 0,0,0 57.3987252124646 0 134.42 53.0184135977337 0.520967407099855 54.246 49.570821529745 0.547124766452149 28.532 0 0 chimp,dog,horse,human,macaque,mouse,orangutan,rat, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0.0016055, 0 0 0 0 ENSG00000254918.1 ENST00000530957.1 chr11:133778894-133782774 2 1271 2607 intergenic 6.82 0 0,0,0 0 0,0,0 112.153422501967 1.69927119294208 0 189.510621557828 3.93862677406981 2.692 175.970889063729 2.58381281166091 4.673 0 0 chimp,elephant,guinea_pig,horse,human,macaque,marmoset,mouse,orangutan,panda,rat, lincRNA lincRNA A549@0.173675,AG04450@0.0037,BJ@0.029941,GM12878@0.543643,H1HESC@2.92952,HELAS3@0,HEPG2@0,HMEC@0.170475,HSMM@0.0423735,HUVEC@0,K562@0.0081405,MCF7@0.512285,NHEK@0.0665317,NHLF@0.0030655,SKNSHRA@1.94691, 0 0 0 0 ENSG00000255406.1 ENST00000532272.1 chr11:133896882-133898013 2 514 615 intergenic 4.68 0 0,1,0 0 0,0,0 0 0 48.501 35.7217898832685 0 69.216 37.0603112840467 0 68.257 0 0 chimp,horse,human,macaque,marmoset,orangutan,panda, lincRNA lincRNA A549@0,AG04450@0.012498,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0.039677,HSMM@0.0039875,HUVEC@0,K562@0,MCF7@0.0038965,NHEK@0.002553,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000204241.3 ENST00000533922.1 chr11:133902167-133911143 3 2203 6769 intergenic 6.98 1 0,0,0 0 0,1,0 93.854289605084 29.6269759196336 0 33.604176123468 18.9406116117595 5.966 37.6836132546527 17.8793027035013 7.392 0 0 chimp,elephant,horse,human,macaque,orangutan,panda,rabbit, lincRNA processed_transcript A549@0.011865,AG04450@0.0753845,BJ@0.201694,GM12878@0.006383,H1HESC@0.277315,HELAS3@0,HEPG2@0.0094965,HMEC@0.011088,HSMM@0.077658,HUVEC@0,K562@0,MCF7@0.083814,NHEK@0.066459,NHLF@0.197375,SKNSHRA@0.466732, 0 0 0 0 ENSG00000204241.3 ENST00000532706.1 chr11:133902282-133909725 2 541 6900 intergenic 4.06 0 0,1,0 0 0,1,0 262.120147874307 29.0644927536232 0 95.5452865064695 18.6191304347826 5.966 98.083179297597 17.5782608695652 7.392 0 0 cat,chimp,dog,elephant,guinea_pig,horse,human,macaque,marmoset,mouse,orangutan,panda,pig,rabbit,rat, lincRNA processed_transcript A549@0.011865,AG04450@0.0753845,BJ@0.201694,GM12878@0.006383,H1HESC@0.277315,HELAS3@0,HEPG2@0.0094965,HMEC@0.011088,HSMM@0.077658,HUVEC@0,K562@0,MCF7@0.083814,NHEK@0.066459,NHLF@0.197375,SKNSHRA@0.466732, 0 0 0 0 ENSG00000204241.3 ENST00000529070.1 chr11:133902547-133908870 2 1671 4650 intergenic 6.98 1 0,0,0 0 0,1,0 23.3087971274686 43.1279569892473 102.384 13.7127468581688 20.8634408602151 46.16 10.4368641532017 20.5086021505376 54.845 0 1 chimp,human,marmoset, lincRNA processed_transcript A549@0.011865,AG04450@0.0753845,BJ@0.201694,GM12878@0.006383,H1HESC@0.277315,HELAS3@0,HEPG2@0.0094965,HMEC@0.011088,HSMM@0.077658,HUVEC@0,K562@0,MCF7@0.083814,NHEK@0.066459,NHLF@0.197375,SKNSHRA@0.466732, 0 0 0 0 ENSG00000204241.3 ENST00000533091.1 chr11:133902691-133910162 2 569 6900 intergenic 3.69 0 0,0,0 0 0,1,0 42.1792618629174 29.0644927536232 117.432 9.701230228471 18.6191304347826 52.136 9.85940246045694 17.5782608695652 54.845 0 0 chimp,horse,human,macaque,marmoset,orangutan,panda,rabbit, lincRNA processed_transcript A549@0.011865,AG04450@0.0753845,BJ@0.201694,GM12878@0.006383,H1HESC@0.277315,HELAS3@0,HEPG2@0.0094965,HMEC@0.011088,HSMM@0.077658,HUVEC@0,K562@0,MCF7@0.083814,NHEK@0.066459,NHLF@0.197375,SKNSHRA@0.466732, 0 0 0 0 ENSG00000204241.3 ENST00000527712.1 chr11:133902700-133916744 4 590 13448 intergenic 5.27 0 0,0,1 0 0,1,0 34.9576271186441 23.1271564544914 120.807 9.35593220338983 14.5925788221297 52.136 9.50847457627119 15.6528851873885 54.845 0 0 chimp,horse,human,macaque,marmoset,orangutan,panda, lincRNA processed_transcript A549@0.011865,AG04450@0.0753845,BJ@0.201694,GM12878@0.006383,H1HESC@0.277315,HELAS3@0,HEPG2@0.0094965,HMEC@0.011088,HSMM@0.077658,HUVEC@0,K562@0,MCF7@0.083814,NHEK@0.066459,NHLF@0.197375,SKNSHRA@0.466732, 0 0 0 0 ENSG00000254648.1 ENST00000526377.1 chr11:133905727-133907002 2 1128 145 intergenic -2.26 0 0,0,0 0 0,0,0 0 0 0 5.27659574468085 0 11.673 6.82978723404255 0 11.83 0 1 chimp,human,macaque,orangutan, lincRNA lincRNA A549@0.003842,AG04450@0.070313,BJ@0.100455,GM12878@0.0218165,H1HESC@0.193914,HELAS3@0,HEPG2@0,HMEC@0.007247,HSMM@0.0181555,HUVEC@0.044962,K562@0,MCF7@0.0459735,NHEK@0.0423573,NHLF@0.256011,SKNSHRA@0.601721, 0 0 0 0 ENSG00000204241.3 ENST00000531938.1 chr11:133907004-133909834 2 709 2119 intergenic 3.69 0 0,1,0 0 0,1,0 0 0 0 0 14.7210948560642 5.952 0 12.1094856064181 7.704 1 1 chimp,human,macaque,marmoset,orangutan, lincRNA processed_transcript A549@0.011865,AG04450@0.0753845,BJ@0.201694,GM12878@0.006383,H1HESC@0.277315,HELAS3@0,HEPG2@0.0094965,HMEC@0.011088,HSMM@0.077658,HUVEC@0,K562@0,MCF7@0.083814,NHEK@0.066459,NHLF@0.197375,SKNSHRA@0.466732, 0 0 0 0 ENSG00000204241.3 ENST00000532327.1 chr11:133908538-133911143 2 1759 844 intergenic 3.69 1 0,0,0 0 0,1,0 36.9266628766345 0 0 12.7003979533826 23.4407582938389 11.41 17.0289937464468 16.7002369668246 11.565 0 0 chimp,elephant,horse,human,macaque,orangutan,panda, lincRNA processed_transcript A549@0.011865,AG04450@0.0753845,BJ@0.201694,GM12878@0.006383,H1HESC@0.277315,HELAS3@0,HEPG2@0.0094965,HMEC@0.011088,HSMM@0.077658,HUVEC@0,K562@0,MCF7@0.083814,NHEK@0.066459,NHLF@0.197375,SKNSHRA@0.466732, 0 0 0 0 ENSG00000255348.1 ENST00000531710.1 chr11:134048719-134056061 2 332 7008 exonic -5.16 0 0,1,1 0 0,0,0 61.8253012048193 9.83504566210046 0 84.9849397590362 22.1809360730594 14.802 111.343373493976 25.6658105022831 23.323 0 0 chimp,guinea_pig,human,macaque,marmoset,opossum,orangutan, antisense antisense A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000255545.1 ENST00000531319.1 chr11:134306367-134337169 2 1400 29400 intergenic 12.66 0 0,1,0 0 0,0,0 0 6.34578231292517 0 0 5.57517006802721 2.367 0 9.06095238095238 2.915 0 0 chimp,guinea_pig,horse,human,macaque,orangutan, lincRNA lincRNA A549@0.0669625,AG04450@0.0209195,BJ@0.0198435,GM12878@0.00167,H1HESC@0.356764,HELAS3@0.113043,HEPG2@0.0539625,HMEC@0,HSMM@0,HUVEC@0.060555,K562@0.0190615,MCF7@0,NHEK@0.000352667,NHLF@0,SKNSHRA@0.590342, 0 0 0 0 ENSG00000255545.1 ENST00000533390.1 chr11:134306629-134374934 6 1857 66438 intergenic 12.66 0 0,0,0 0 0,0,0 0 4.76844576898763 0 0 6.12959450916644 2.367 0 17.8565880971733 2.915 0 1 chimp,human,marmoset,orangutan, lincRNA lincRNA A549@0.0669625,AG04450@0.0209195,BJ@0.0198435,GM12878@0.00167,H1HESC@0.356764,HELAS3@0.113043,HEPG2@0.0539625,HMEC@0,HSMM@0,HUVEC@0.060555,K562@0.0190615,MCF7@0,NHEK@0.000352667,NHLF@0,SKNSHRA@0.590342, 0 0 0 0 ENSG00000255545.1 ENST00000528482.1 chr11:134336079-134357809 6 3614 18106 intergenic 12.66 0 0,0,0 0 0,0,0 0 2.65326411134431 0 0 6.85474428366287 0 69.0370780298838 6.69667513531426 0 0 1 chimp,human, lincRNA lincRNA A549@0.0669625,AG04450@0.0209195,BJ@0.0198435,GM12878@0.00167,H1HESC@0.356764,HELAS3@0.113043,HEPG2@0.0539625,HMEC@0,HSMM@0,HUVEC@0.060555,K562@0.0190615,MCF7@0,NHEK@0.000352667,NHLF@0,SKNSHRA@0.590342, 0 0 0 0 ENSG00000255545.1 ENST00000532886.1 chr11:134349193-134375507 3 4384 21926 intergenic 9.52 1 0,0,1 0 0,0,0 5.27600364963504 4.35327921189455 0 9.93795620437956 5.56927848216729 0 8.58918795620438 36.6243728906321 0 0 0 chimp,horse,human,macaque,marmoset, lincRNA retained_intron A549@0.0669625,AG04450@0.0209195,BJ@0.0198435,GM12878@0.00167,H1HESC@0.356764,HELAS3@0.113043,HEPG2@0.0539625,HMEC@0,HSMM@0,HUVEC@0.060555,K562@0.0190615,MCF7@0,NHEK@0.000352667,NHLF@0,SKNSHRA@0.590342, 0 0 0 0 ENSG00000254573.1 ENST00000532652.1 chr11:134433290-134442950 3 511 9145 intergenic 4.18 0 1,1,1 0 0,0,0 39.0821917808219 0 0 24.4481409001957 0.287479496992892 0 41.8864970645793 0.292290869327501 0 0 0 cat,chimp,horse,human,macaque,marmoset,orangutan,panda,rabbit, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0.027104,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000254989.1 ENST00000529417.1 chr11:134541320-134541918 2 387 209 intergenic -1.95 0 0,0,0 0 0,0,0 0 0 0 0 0 0 0 0 0 1 1 chimp,human,macaque,marmoset,orangutan, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000255344.1 ENST00000529922.1 chr11:134584436-134585816 2 453 925 intergenic -0.17 0 0,0,0 0 0,0,0 0 0 17.219 0 0 0 0 0 1.554 0 0 cat,chimp,horse,human,orangutan,rabbit, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000251226.1 ENST00000513405.1 chr11:134605490-134633704 2 3682 24530 intergenic 18.47 1 0,0,1 0 0,1,0 9.7099402498642 0.337545862209539 25.44 7.52227050516024 0.562535670607419 75.558 18.7854426941879 4.62600896860986 126.981 0 1 chimp,human, lincRNA lincRNA A549@0,AG04450@0.0640775,BJ@0.068286,GM12878@0.0010945,H1HESC@0.104492,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0.036846,HUVEC@0.0666825,K562@0.045045,MCF7@0,NHEK@0.005704,NHLF@0.003178,SKNSHRA@0.0039275, 0 0 0 0 ENSG00000254716.1 ENST00000529881.1 chr11:134815478-134846593 6 1850 29255 intergenic 2.49 0 0,0,0 0 0,0,0 0 0 0 0 0.856537344043753 0 0 2.15470859682106 0 0 0 human, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0.0101035,H1HESC@0,HELAS3@0,HEPG2@0.002296,HMEC@0,HSMM@0.003326,HUVEC@0.006414,K562@0,MCF7@0,NHEK@0,NHLF@0.0021025,SKNSHRA@0, 0 0 0 0 ENSG00000255327.1 ENST00000528497.1 chr11:134820602-134821462 2 760 98 intergenic -1.95 0 0,0,0 0 0,0,0 0 0 0 0 0 0 0 0 0 0 0 cat,dog,horse,human,orangutan, lincRNA lincRNA A549@0,AG04450@0.0322935,BJ@0.051364,GM12878@0,H1HESC@0.0412635,HELAS3@0.0092015,HEPG2@0,HMEC@0,HSMM@0.0455345,HUVEC@0.037626,K562@0,MCF7@0,NHEK@0,NHLF@0.015193,SKNSHRA@0.032804, 0 0 0 0 ENSG00000255512.1 ENST00000532071.1 chr11:134931675-134945793 3 711 13403 intergenic -0.38 0 0,0,0 0 0,0,0 0 0 0 0 0 0 0 9.05297321495188 0 0 1 human,orangutan, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000249054.2 ENST00000504074.1 chr12:67607-69138 3 1184 343 intergenic 3.76 1 0,0,0 0 0,0,0 0 0 0 3.77027027027027 0 24.72 3.9375 0 30.43 0 0 cat,chimp,human,orangutan, lincRNA lincRNA A549@0.0028415,AG04450@0.0579975,BJ@0.0149825,GM12878@0.006675,H1HESC@0.101294,HELAS3@0,HEPG2@0.007683,HMEC@0.00345,HSMM@0,HUVEC@0.002507,K562@0.384815,MCF7@0,NHEK@0.0168927,NHLF@0.0163295,SKNSHRA@0, 0 0 0 0 ENSG00000249054.2 ENST00000546223.1 chr12:67638-69079 2 1197 242 intergenic 3.76 1 0,0,0 0 0,0,0 0 0 0 3.72932330827068 0 24.72 3.89473684210526 0 30.43 0 0 cat,chimp,human,macaque,orangutan, lincRNA lincRNA A549@0.0028415,AG04450@0.0579975,BJ@0.0149825,GM12878@0.006675,H1HESC@0.101294,HELAS3@0,HEPG2@0.007683,HMEC@0.00345,HSMM@0,HUVEC@0.002507,K562@0.384815,MCF7@0,NHEK@0.0168927,NHLF@0.0163295,SKNSHRA@0, 37 3 0 0 ENSG00000206114.4 ENST00000440796.2 chr12:147073-149346 2 603 1668 intergenic 1.91 0 0,0,0 0 0,1,0 0 0 0 0 0 38.106 0 0 39.444 0 1 chimp,human,orangutan, lincRNA lincRNA A549@0,AG04450@0.0301925,BJ@0,GM12878@0,H1HESC@0.012857,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0.0384225,MCF7@0,NHEK@0,NHLF@0.0018135,SKNSHRA@0, 0 0 0 0 ENSG00000206114.4 ENST00000320165.4 chr12:147948-149350 3 1061 337 intergenic 1.77 1 0,0,1 0 0,1,0 0 0 0 0 0 38.106 0 0 39.444 0 0 cat,chimp,human,macaque,orangutan,panda, lincRNA lincRNA A549@0,AG04450@0.0301925,BJ@0,GM12878@0,H1HESC@0.012857,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0.0384225,MCF7@0,NHEK@0,NHLF@0.0018135,SKNSHRA@0, 0 0 0 0 ENSG00000206114.4 ENST00000355746.4 chr12:147948-149408 3 1121 335 intergenic 2.58 1 0,0,1 0 0,1,0 0 0 0 0 0 38.106 0 0 39.444 0 0 cat,chimp,human,macaque,orangutan,panda, lincRNA lincRNA A549@0,AG04450@0.0301925,BJ@0,GM12878@0,H1HESC@0.012857,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0.0384225,MCF7@0,NHEK@0,NHLF@0.0018135,SKNSHRA@0, 37 3 0 0 ENSG00000256948.1 ENST00000540226.1 chr12:215690-221016 2 584 4740 intronic 2.49 0 1,1,1 0 0,0,0 0 0 0 0 0 0 2.91267123287671 25.3888185654008 0 0 0 chimp,human,marmoset,orangutan,pig, antisense non_coding A549@0,AG04450@0,BJ@0,GM12878@0.28088,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0.0242315,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000249695.2 ENST00000505893.2 chr12:246577-258335 10 2897 8843 exonic 7.94 1 0,0,1 0 0,0,0 40.1215050051778 11.4222548908741 0 81.0334829133587 42.3095103471672 5.72 87.6296168450121 48.4359380300803 2.12 0 1 chimp,human,macaque,orangutan, antisense antisense A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0.002274,HELAS3@0,HEPG2@0.001301,HMEC@0.001667,HSMM@0,HUVEC@0,K562@0.000845,MCF7@0,NHEK@0.00272167,NHLF@0,SKNSHRA@0.0017065, 0 0 0 0 ENSG00000249695.2 ENST00000508953.2 chr12:248700-258281 7 4906 4663 exonic 12.11 1 0,0,1 0 0,0,0 8.55116184264166 7.12159553935235 0 21.9637178964533 18.2654943169633 5.72 30.7651854871586 22.9613982414754 2.12 0 1 chimp,human,orangutan, antisense antisense A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0.002274,HELAS3@0,HEPG2@0.001301,HMEC@0.001667,HSMM@0,HUVEC@0,K562@0.000845,MCF7@0,NHEK@0.00272167,NHLF@0,SKNSHRA@0.0017065, 0 0 0 0 ENSG00000256694.1 ENST00000540136.1 chr12:273830-275487 2 1099 556 exonic 9.80 0 0,0,0 0 0,0,0 50.8371246587807 0 0 103.40491355778 0 0 123.801637852593 0 2.43 0 0 chimp,elephant,horse,human,macaque,marmoset,orangutan,panda, antisense antisense A549@0.006989,AG04450@0,BJ@0.0044725,GM12878@0,H1HESC@0.0037685,HELAS3@0,HEPG2@0.021772,HMEC@0,HSMM@0.021364,HUVEC@0,K562@0,MCF7@0,NHEK@0.00115933,NHLF@0.122676,SKNSHRA@0.0041285, 0 0 0 0 ENSG00000256540.1 ENST00000537295.1 chr12:276022-291562 3 1060 14476 intronic 2.46 0 0,0,0 0 0,0,0 0 20.8885741917657 0 0 47.0587178778668 4.624 0 51.5422768720641 5.365 0 0 cat,human,macaque,marmoset,orangutan, antisense lincRNA A549@0.0243675,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0.0113875,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0.05158,SKNSHRA@0.0113495, 0 0 0 0 ENSG00000256540.1 ENST00000537961.1 chr12:276168-291565 2 1036 14359 intronic 2.46 0 0,0,0 0 0,0,0 0 21.058778466467 0 0 47.4421617104255 4.624 0 51.9622536388328 5.365 0 0 elephant,horse,human,macaque,marmoset,orangutan, antisense lincRNA A549@0.0243675,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0.0113875,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0.05158,SKNSHRA@0.0113495, 0 0 0 0 ENSG00000255671.1 ENST00000544067.1 chr12:302202-303296 2 313 779 intronic -1.81 0 0,1,0 0 0,0,0 0 51.0962772785623 38.295 0 74.5725288831836 65.828 0 75.798459563543 71.328 0 0 chimp,elephant,human,macaque,marmoset, antisense non_coding A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000256577.1 ENST00000539568.1 chr12:312808-314189 3 691 686 exonic -5.41 0 0,0,1 0 0,0,0 0 18.2798833819242 26.568 33.232995658466 54.2769679300292 55.006 46.6743849493488 51.701166180758 55.408 0 0 chimp,elephant,human,macaque,marmoset,mouse,pig, antisense antisense A549@0.012511,AG04450@0.0032295,BJ@0,GM12878@0,H1HESC@0.0702985,HELAS3@0.003824,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0.0163685, 0 0 0 0 ENSG00000255746.1 ENST00000540868.1 chr12:362608-366465 3 500 3353 intronic -2.99 0 0,0,1 0 0,0,0 0 0 39.032 0 0.665672532060841 58.062 6.318 0.695198329853862 52.223 0 0 chimp,elephant,horse,human,macaque,marmoset,orangutan,panda,pig, sense_intronic non_coding A549@0,AG04450@0,BJ@0,GM12878@0.003821,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0.0114933,NHLF@0,SKNSHRA@0.025046, 0 0 0 0 ENSG00000256020.1 ENST00000538943.1 chr12:695031-695652 2 371 248 intronic -0.72 0 0,0,1 0 0,0,0 0 0 0 0 0 0 5.89487870619946 0 0 0 0 cat,chimp,dog,horse,human,macaque,marmoset,orangutan,panda, sense_intronic non_coding A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0.016645,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000255825.1 ENST00000538067.1 chr12:699799-700435 2 387 247 intronic -5.61 0 0,0,0 0 0,0,0 0 0 0 0 0 0 0 0 2.72 1 1 chimp,human,macaque,marmoset,orangutan, antisense non_coding A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000177406.4 ENST00000537514.1 chr12:740057-755044 5 2333 12646 intronic 2.92 0 0,1,1 1 0,1,0 42.3591941705958 6.41198798038906 0 21.1037291041577 188.855922821446 20.842 21.3039005572225 16.3673888976752 23.257 0 0 chimp,elephant,human,macaque,marmoset,orangutan, antisense antisense A549@1.25382,AG04450@0.414975,BJ@0.255211,GM12878@2.25989,H1HESC@0.78986,HELAS3@1.4071,HEPG2@0.503367,HMEC@0.115099,HSMM@0.195013,HUVEC@0.499807,K562@1.35627,MCF7@0.495812,NHEK@0.275856,NHLF@0.406599,SKNSHRA@0.126791, 0 0 0 0 ENSG00000177406.4 ENST00000543884.1 chr12:751840-772872 3 596 20432 exonic 2.92 0 0,1,1 1 0,1,0 0 9.40470830070478 0 61.2953020134228 7.21206930305403 5.17 66.1510067114094 8.14707321848082 6.139 0 0 chimp,cow,dog,elephant,horse,human,macaque,marmoset,orangutan,rabbit,rat, antisense antisense A549@1.25382,AG04450@0.414975,BJ@0.255211,GM12878@2.25989,H1HESC@0.78986,HELAS3@1.4071,HEPG2@0.503367,HMEC@0.115099,HSMM@0.195013,HUVEC@0.499807,K562@1.35627,MCF7@0.495812,NHEK@0.275856,NHLF@0.406599,SKNSHRA@0.126791, 0 0 0 0 ENSG00000177406.4 ENST00000318291.4 chr12:752147-754581 2 2192 240 exonic 9.20 0 1,1,1 0 0,1,0 32.5387773722628 0 0 15.0506386861314 0 5.17 15.5109489051095 0 6.139 0 0 chimp,elephant,human,macaque,marmoset,orangutan, antisense antisense A549@1.25382,AG04450@0.414975,BJ@0.255211,GM12878@2.25989,H1HESC@0.78986,HELAS3@1.4071,HEPG2@0.503367,HMEC@0.115099,HSMM@0.195013,HUVEC@0.499807,K562@1.35627,MCF7@0.495812,NHEK@0.275856,NHLF@0.406599,SKNSHRA@0.126791, 0 0 0 0 ENSG00000256672.1 ENST00000541881.1 chr12:783967-793293 3 493 8829 intergenic -2.04 0 0,1,1 0 0,0,0 0 5.10986521689886 0 0 3.97632800996715 9.308 0 6.22901800883452 12.851 0 1 chimp,human,macaque,orangutan, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0.051678,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000249028.2 ENST00000513082.2 chr12:1489226-1500668 2 2086 9354 intronic 5.09 0 0,0,0 0 0,0,0 0 6.08274534958307 0 0 8.19200342099636 0 0 13.7646995937567 0 1 1 chimp,human,macaque,marmoset,orangutan, antisense non_coding A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0.001869,SKNSHRA@0.002177, 0 0 0 0 ENSG00000249628.2 ENST00000515614.2 chr12:1609691-1616484 3 2414 4375 intergenic -0.53 0 0,0,1 0 0,0,0 0 4.36114285714286 0 30.3512841756421 3.57348571428571 1.912 34.8429991714996 31.0806857142857 1.944 0 1 human,marmoset,orangutan, lincRNA lincRNA A549@0.007764,AG04450@0.0048995,BJ@0.0118425,GM12878@0.0244095,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0.062681,HSMM@0.114534,HUVEC@0,K562@0,MCF7@0.219817,NHEK@0.184794,NHLF@0.0049755,SKNSHRA@0.0316295, 0 0 0 0 ENSG00000256706.1 ENST00000544163.1 chr12:2027117-2032033 2 313 4601 intronic 2.68 0 0,1,1 0 0,0,0 0 4.25820473810041 0 0 8.55661812649424 0 0 8.66398608998044 0 1 1 chimp,human,macaque,marmoset,orangutan, antisense non_coding A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000235049.1 ENST00000418006.1 chr12:2038368-2045740 2 2348 5022 intergenic 12.01 0 0,0,0 0 0,1,0 0 0 40.2 0 1.15551573078455 21.293 0 6.01612903225806 32.875 0 0 human, lincRNA lincRNA A549@0,AG04450@0.001372,BJ@0,GM12878@0.024159,H1HESC@0.000883,HELAS3@0,HEPG2@0.014961,HMEC@0,HSMM@0.03417,HUVEC@0.002533,K562@0.0011395,MCF7@0.062013,NHEK@0,NHLF@0.117265,SKNSHRA@0.0818055, 0 0 0 0 ENSG00000203593.3 ENST00000354425.4 chr12:2113832-2120558 2 627 6097 intronic -0.38 0 0,1,0 0 0,0,0 0 8.02033787108414 78.76 0 5.2046908315565 100.917 0 7.65770050844678 121.095 0 0 chimp,guinea_pig,human,macaque,marmoset,orangutan, antisense non_coding A549@0.0223235,AG04450@0.0163925,BJ@0.014284,GM12878@0,H1HESC@0.0053585,HELAS3@0,HEPG2@0.005399,HMEC@0,HSMM@0.0003525,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 2 44 0 0 ENSG00000256837.1 ENST00000542984.1 chr12:2127379-2129698 2 685 1632 intronic -9.31 0 0,0,1 0 0,0,0 0 0 0 3.14014598540146 1.02512254901961 13.942 3.19270072992701 3.45894607843137 25.437 0 0 cat,chimp,dog,horse,human,macaque,marmoset,orangutan,panda, sense_intronic non_coding A549@0.001423,AG04450@0.0041775,BJ@0,GM12878@0.011596,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0.0082065, 0 0 0 0 ENSG00000256257.1 ENST00000541871.1 chr12:2157518-2158629 2 587 522 intronic -5.71 0 0,0,0 0 0,0,0 56.1567291311755 0 0 0 0 0 0 0 0 0 0 guinea_pig,horse,human,macaque,marmoset,orangutan, sense_intronic non_coding A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000256025.1 ENST00000544415.1 chr12:2329703-2332645 4 731 2205 intronic 1.22 0 0,0,1 0 0,0,0 0 0 0 0 8.11156462585034 0 0 11.0263038548753 0 0 0 cat,chimp,dog,guinea_pig,horse,human,macaque,marmoset,orangutan, antisense non_coding A549@0,AG04450@0.008774,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000256721.1 ENST00000542680.1 chr12:2378942-2398103 3 619 18538 intronic 0.11 0 0,0,0 0 0,0,0 16.3489499192246 4.83860179091596 53.057 0 8.25644621857806 19.65 6.16478190630048 23.6571366921998 44.881 0 0 cat,chimp,dog,elephant,human,macaque,marmoset,orangutan,panda, sense_intronic non_coding A549@0,AG04450@0.081246,BJ@0.294518,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0.0063855, 0 0 0 0 ENSG00000256769.1 ENST00000543559.1 chr12:2712516-2716606 2 442 3646 intronic 0.10 0 0,1,0 0 0,0,0 0 41.6313768513439 0 0 53.733680746023 6.489 0 64.3985189248492 6.34 0 0 chimp,guinea_pig,horse,human,macaque,marmoset,orangutan, antisense non_coding A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000256271.1 ENST00000545526.1 chr12:2777666-2781386 2 607 3111 exonic 5.96 0 0,0,1 0 0,0,0 52.0428336079077 2.70781099324976 0 69.505766062603 3.76309868209579 0 78.830313014827 3.69656059144969 0 0 0 chimp,dog,human,macaque,marmoset,mouse,orangutan, antisense antisense A549@0.060913,AG04450@0.033684,BJ@0.0158945,GM12878@0.040799,H1HESC@2.32843,HELAS3@0.0348365,HEPG2@0.170312,HMEC@0,HSMM@0.007486,HUVEC@0.173923,K562@0.0038125,MCF7@0.0067525,NHEK@0,NHLF@0.0192235,SKNSHRA@0.044745, 0 0 0 0 ENSG00000246627.2 ENST00000501371.1 chr12:2785167-2800284 4 2187 12924 exonic 5.12 0 0,0,1 1 0,0,0 41.6538637402835 11.8322500773754 142.528 84.6172839506173 35.1384246363355 187.923 100.144032921811 38.7304240173321 228.375 0 0 cat,chimp,horse,human,marmoset,orangutan, antisense antisense A549@0.004503,AG04450@0.004973,BJ@0.002228,GM12878@0.0021395,H1HESC@0.211054,HELAS3@0.0024225,HEPG2@0.011326,HMEC@0,HSMM@0,HUVEC@0.015761,K562@0,MCF7@0.0037535,NHEK@0.00180767,NHLF@0,SKNSHRA@0.020787, 0 0 0 0 ENSG00000246627.2 ENST00000544517.1 chr12:2799029-2800366 2 740 595 exonic 5.81 0 0,0,0 1 0,0,0 157.708108108108 0 117.926 134.386486486486 0 180.677 165.460810810811 17.1831932773109 215.318 0 0 cat,chimp,dog,horse,human,macaque,marmoset,orangutan,rabbit, antisense antisense A549@0.004503,AG04450@0.004973,BJ@0.002228,GM12878@0.0021395,H1HESC@0.211054,HELAS3@0.0024225,HEPG2@0.011326,HMEC@0,HSMM@0,HUVEC@0.015761,K562@0,MCF7@0.0037535,NHEK@0.00180767,NHLF@0,SKNSHRA@0.020787, 0 0 0 0 ENSG00000246627.2 ENST00000541673.1 chr12:2799064-2800323 3 572 683 exonic 0 0 0,0,0 1 0,0,0 99.5804195804196 57.3352855051245 137.62 87.9825174825175 52.6720351390922 187.953 106.036713286713 72.3367496339678 227.134 0 0 cat,chimp,dog,horse,human,macaque,marmoset,orangutan,rabbit, antisense antisense A549@0.004503,AG04450@0.004973,BJ@0.002228,GM12878@0.0021395,H1HESC@0.211054,HELAS3@0.0024225,HEPG2@0.011326,HMEC@0,HSMM@0,HUVEC@0.015761,K562@0,MCF7@0.0037535,NHEK@0.00180767,NHLF@0,SKNSHRA@0.020787, 0 0 0 0 ENSG00000256150.1 ENST00000540093.1 chr12:2851792-2881074 2 218 29062 intergenic 5.07 0 0,1,0 0 0,0,0 0 0 0 0 9.21660587709036 0 0 13.2783703805657 0 0 1 chimp,human,macaque,orangutan, processed_transcript lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000255669.1 ENST00000536497.1 chr12:2870366-2879621 4 546 8703 intergenic 8.79 0 0,0,1 0 0,0,0 0 0 0 3.06410256410256 3.86786165689992 0 9.80952380952381 4.1023784901758 5.957 0 1 chimp,human,macaque, antisense lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0.025177,HEPG2@0.0087855,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0.010682, 0 0 0 0 ENSG00000256908.1 ENST00000537710.1 chr12:2945977-2968957 4 874 22100 exonic -1.10 0 0,1,1 0 0,0,0 27.58352402746 6.5262443438914 0 20.6693363844394 18.5785520361991 0 32.3935926773455 18.3749321266968 0 0 0 chimp,cow,dog,elephant,horse,human,marmoset,orangutan, antisense antisense A549@0.60858,AG04450@0.086809,BJ@0.147238,GM12878@0.235364,H1HESC@0.2195,HELAS3@0.544908,HEPG2@0.751653,HMEC@0.531603,HSMM@0.070929,HUVEC@0.22146,K562@0.295634,MCF7@0.282582,NHEK@0.263788,NHLF@0.0805965,SKNSHRA@0.241578, 0 0 0 0 ENSG00000256908.1 ENST00000540300.1 chr12:2966418-2966848 2 276 152 intergenic 0 1 0,1,1 0 0,0,0 0 0 0 0 0 25.81 0 0 23.874 0 0 chimp,dog,elephant,horse,human,macaque,marmoset,orangutan,panda,pig, antisense antisense A549@0.60858,AG04450@0.086809,BJ@0.147238,GM12878@0.235364,H1HESC@0.2195,HELAS3@0.544908,HEPG2@0.751653,HMEC@0.531603,HSMM@0.070929,HUVEC@0.22146,K562@0.295634,MCF7@0.282582,NHEK@0.263788,NHLF@0.0805965,SKNSHRA@0.241578, 0 0 0 0 ENSG00000256908.1 ENST00000545509.1 chr12:2966454-2968948 2 1291 1201 exonic -0.15 0 0,0,1 0 0,0,0 18.6738962044926 64.5886761032473 0 33.1099922540666 170.109908409659 25.81 33.8845855925639 190.343880099917 23.874 0 0 cat,chimp,cow,dog,elephant,horse,human,macaque,marmoset,orangutan,panda,rabbit, antisense antisense A549@0.60858,AG04450@0.086809,BJ@0.147238,GM12878@0.235364,H1HESC@0.2195,HELAS3@0.544908,HEPG2@0.751653,HMEC@0.531603,HSMM@0.070929,HUVEC@0.22146,K562@0.295634,MCF7@0.282582,NHEK@0.263788,NHLF@0.0805965,SKNSHRA@0.241578, 0 0 0 0 ENSG00000250899.2 ENST00000513358.2 chr12:3150603-3154116 2 3483 28 intergenic 0.99 0 0,0,1 0 0,0,0 0 0 92.136 2.8196956646569 0 63.889 4.90152167671548 0 64.369 0 1 human,macaque,orangutan, lincRNA lincRNA A549@0.91517,AG04450@0.445453,BJ@0.821635,GM12878@0,H1HESC@5.48547,HELAS3@1.40509,HEPG2@1.57734,HMEC@0.551384,HSMM@9.38012,HUVEC@1.27545,K562@0.545642,MCF7@1.05699,NHEK@0.423338,NHLF@0.91309,SKNSHRA@0.536361, 0 0 0 0 ENSG00000256197.1 ENST00000539784.1 chr12:3258963-3260642 2 560 1117 intronic -6.01 0 0,0,0 0 0,0,0 153.801785714286 27.3948075201432 61.984 169.341071428571 35.325872873769 63.885 181.294642857143 35.0089525514772 76.83 0 0 chimp,elephant,guinea_pig,human,macaque,marmoset,mouse,opossum,orangutan,rabbit,rat, sense_intronic sense_intronic A549@0.076573,AG04450@0.017607,BJ@0.013424,GM12878@0,H1HESC@0.035831,HELAS3@0.13664,HEPG2@0.0794155,HMEC@0,HSMM@0,HUVEC@0.576763,K562@0,MCF7@0.359727,NHEK@0.0553737,NHLF@0,SKNSHRA@0.057466, 0 0 0 0 ENSG00000250770.2 ENST00000505276.2 chr12:3405368-3409390 2 2301 1719 intergenic 7.85 0 0,0,0 0 0,0,0 0 0 0 6.57670578009561 2.1413612565445 1.195 7.12342459800087 2.31937172774869 1.215 1 1 chimp,human,macaque,marmoset,orangutan, lincRNA lincRNA A549@0.004814,AG04450@0.030467,BJ@0.0380755,GM12878@0.0035015,H1HESC@0.0217905,HELAS3@0.003457,HEPG2@0,HMEC@0.072449,HSMM@0.085912,HUVEC@0.0025845,K562@0,MCF7@0.0115685,NHEK@0.046157,NHLF@0.072062,SKNSHRA@0.032602, 0 0 0 0 ENSG00000236908.2 ENST00000432994.2 chr12:3427884-3434509 2 3002 3621 intergenic 9.36 0 0,0,1 0 0,0,0 0 0 18.104 16.4953364423718 1.68461750897542 14.816 26.9693537641572 3.38690969345485 23.825 0 0 elephant,human,macaque,marmoset,orangutan, lincRNA lincRNA A549@0.051945,AG04450@0.013424,BJ@0.0256685,GM12878@0.0032195,H1HESC@0.014777,HELAS3@0.006997,HEPG2@0.0035915,HMEC@0.040523,HSMM@0.068427,HUVEC@0,K562@0,MCF7@0.162737,NHEK@0.120872,NHLF@0.001299,SKNSHRA@0.043214, 0 0 0 0 ENSG00000236908.2 ENST00000543036.1 chr12:3428607-3434506 3 638 5257 intergenic 3.94 0 0,0,1 0 0,0,0 0 0 0 38.0047021943574 5.87863800646757 0 73.0376175548589 8.75822712573711 0 0 0 cat,elephant,horse,human,macaque,marmoset,orangutan, lincRNA lincRNA A549@0.051945,AG04450@0.013424,BJ@0.0256685,GM12878@0.0032195,H1HESC@0.014777,HELAS3@0.006997,HEPG2@0.0035915,HMEC@0.040523,HSMM@0.068427,HUVEC@0,K562@0,MCF7@0.162737,NHEK@0.120872,NHLF@0.001299,SKNSHRA@0.043214, 0 0 0 0 ENSG00000257048.1 ENST00000542449.1 chr12:3476999-3480512 3 512 2997 intergenic 0 0 0,1,0 0 0,0,0 2.9296875 13.013013013013 0 0.96875 6.12212212212212 0 0.98046875 6.27927927927928 0 0 0 chimp,elephant,human,macaque,marmoset,orangutan, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0.070808,HELAS3@0,HEPG2@0,HMEC@0.007951,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000256691.1 ENST00000546078.1 chr12:3571884-3572752 2 528 338 intronic -4.31 0 0,0,0 0 0,0,0 0 0 0 22.4640151515152 0 26.413 22.3541666666667 0 33.023 0 0 cat,chimp,cow,dog,elephant,human,macaque,marmoset,orangutan,panda,pig, antisense antisense A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000249143.1 ENST00000503679.1 chr12:3592880-3601975 2 5965 3128 intronic 9.86 0 0,0,0 0 0,1,0 20.6404023470243 145.675191815857 158.29 35.9966471081308 170.2976342711 214.89 35.0202849958089 165.050191815857 179.524 1 1 chimp,human,macaque,marmoset,orangutan, lincRNA lincRNA A549@0,AG04450@0.0009925,BJ@0,GM12878@0,H1HESC@0.110114,HELAS3@0,HEPG2@0,HMEC@0.144132,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0.111436,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000256862.1 ENST00000537149.1 chr12:3980900-4019504 2 676 37926 intronic -4.80 0 0,0,1 0 0,0,0 0 19.3858303011127 0 0 23.3237884301007 0 0 22.9420977693403 0 0 1 human,macaque,marmoset, antisense non_coding A549@0,AG04450@0,BJ@0.0044845,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000256862.1 ENST00000545357.1 chr12:4008219-4019472 2 556 10695 intergenic -4.02 0 0,1,0 0 0,0,0 0 2.79336138382422 0 11.3309352517986 5.3137914913511 7.41 11.6708633093525 6.57166900420757 7.648 1 1 chimp,human,macaque,marmoset,orangutan, antisense non_coding A549@0,AG04450@0,BJ@0.0044845,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000256862.1 ENST00000545163.1 chr12:4014386-4019436 2 547 4501 intergenic -0.70 0 0,0,0 0 0,0,0 0 6.63741390802044 0 0 11.7998222617196 0 0 14.7320595423239 0 1 1 chimp,human,macaque,marmoset,orangutan, antisense non_coding A549@0,AG04450@0,BJ@0.0044845,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000256969.1 ENST00000543206.1 chr12:4130143-4135824 2 540 5139 intergenic 7.65 0 0,0,1 0 0,0,0 0 46.8546409807356 0 0 53.5257832263086 0 0 49.9408445222806 0 0 0 chimp,human,macaque,marmoset,orangutan,rabbit, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0.108845,HELAS3@0,HEPG2@0.0177575,HMEC@0.015109,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0.00544467,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000256969.1 ENST00000536141.1 chr12:4135151-4135779 2 436 190 intergenic 7.65 0 1,1,1 1 0,0,0 0 0 202.626 0 0 216.557 0 0 198.785 0 0 chimp,horse,human,macaque,marmoset,orangutan,rabbit, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0.108845,HELAS3@0,HEPG2@0.0177575,HMEC@0.015109,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0.00544467,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000256164.1 ENST00000539135.1 chr12:4357931-4385350 2 553 26864 exonic -0.34 0 0,1,1 0 0,0,0 105.786618444846 50.5928752233472 85.67 127.915009041591 56.776950565813 62.814 115.564195298373 51.3194982132222 65.802 0 0 chimp,dog,guinea_pig,horse,human,macaque,marmoset,orangutan,panda,rabbit, antisense antisense A549@0.027118,AG04450@0.0421935,BJ@0.0087205,GM12878@0.227317,H1HESC@0.073106,HELAS3@0.004782,HEPG2@0,HMEC@0.029511,HSMM@0.062425,HUVEC@0.0413225,K562@0.0353775,MCF7@0,NHEK@0.0240597,NHLF@0.0111015,SKNSHRA@0, 0 0 0 0 ENSG00000255920.1 ENST00000537370.1 chr12:4361901-4384231 2 493 21835 intronic -1.14 0 0,1,1 0 0,0,0 147.819472616633 45.4473093656973 280.548 180.371196754564 55.2398442866957 224.561 181.949290060852 51.0937943668422 167.722 0 0 cat,chimp,cow,dog,elephant,guinea_pig,horse,human,macaque,marmoset,mouse,opossum,orangutan,panda,pig,rabbit,rat, antisense non_coding A549@0,AG04450@0.004108,BJ@0.007228,GM12878@0.0113515,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0.068436,HUVEC@0.009255,K562@0.009586,MCF7@0,NHEK@0.00732567,NHLF@0.0072175,SKNSHRA@0, 0 0 0 0 ENSG00000256381.1 ENST00000544380.1 chr12:4754662-4757193 2 570 1959 intronic 0 0 0,1,0 0 0,0,0 0 0 50.7 0 0 83.167 0 0 92.082 1 1 chimp,human,macaque,marmoset,orangutan, sense_intronic lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000255474.1 ENST00000527518.1 chr12:4809583-4829268 4 1245 18434 intergenic 7.13 0 0,1,1 0 0,0,0 0 1.81132689595313 0 4.58473895582329 1.5777910382988 1.275 4.7574297188755 2.0379733101877 3.685 0 1 human,macaque,marmoset,orangutan, antisense lincRNA A549@0,AG04450@0.003589,BJ@0,GM12878@0.004683,H1HESC@0.522331,HELAS3@0.008809,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0.0018195, 0 0 0 0 ENSG00000256988.1 ENST00000542988.1 chr12:4915708-4917807 2 447 1650 intronic 5.08 0 0,0,0 0 0,0,0 16.6733780760626 0 163.076 35.2930648769575 3.50666666666667 108.731 37.0872483221477 4.93878787878788 123.161 0 0 cat,chimp,cow,dog,elephant,human,macaque,marmoset,orangutan,panda,pig,rabbit, antisense lincRNA A549@0,AG04450@0,BJ@0,GM12878@1.81428,H1HESC@0.005511,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000255608.1 ENST00000512511.2 chr12:4948121-4951841 2 558 3160 intronic -0.56 0 0,0,0 0 0,0,0 0 4.08417721518987 0 0 0.680696202531646 0 0 2.14462025316456 2.187 0 0 chimp,human,macaque,marmoset,orangutan,panda, sense_intronic non_coding A549@0,AG04450@0,BJ@0,GM12878@0.0602475,H1HESC@0.0344085,HELAS3@0,HEPG2@0.0065515,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000256790.1 ENST00000540533.1 chr12:5127631-5130879 2 602 2644 intergenic -0.34 0 0,0,0 0 0,0,0 0 0 0 0 0 6.9 5.20099667774086 0.210287443267776 7.076 0 0 cat,chimp,cow,dog,elephant,horse,human,macaque,marmoset,mouse,orangutan,panda,pig,rabbit, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0.046745,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0.0247775,HUVEC@0,K562@0,MCF7@0.0134655,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000256654.1 ENST00000538202.1 chr12:5132848-5134758 2 721 1187 intergenic 3.27 0 0,1,1 0 0,0,0 0 0 0 5.61719833564494 0 0 64.4590846047157 43.2148272957035 0 0 0 cat,chimp,elephant,horse,human,macaque,marmoset,orangutan,panda,pig, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0.0120605,H1HESC@0.158504,HELAS3@0,HEPG2@0,HMEC@0.011327,HSMM@0,HUVEC@0,K562@0,MCF7@0.028249,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000256115.1 ENST00000544717.1 chr12:5343163-5349269 4 750 5350 intergenic 1.38 0 0,0,0 0 0,0,0 79.8173333333333 14.7127102803738 97.682 174.7 16.4472897196262 74.905 171.452 17.9611214953271 74.402 0 0 chimp,dog,human,macaque,marmoset,orangutan, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0.0446545,NHEK@0,NHLF@0,SKNSHRA@0.010702, 0 0 0 0 ENSG00000256115.1 ENST00000540619.1 chr12:5343584-5349271 4 622 5059 intergenic 1.38 0 0,0,1 0 0,0,0 97.4131832797428 15.5590037556829 96.954 212.33922829582 17.3933583712196 73.855 208.393890675241 18.9942676418264 73.37 0 0 chimp,dog,elephant,horse,human,macaque,marmoset,orangutan,panda,pig, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0.0446545,NHEK@0,NHLF@0,SKNSHRA@0.010702, 0 0 0 0 ENSG00000256115.1 ENST00000540237.1 chr12:5343840-5347438 3 321 3273 intergenic 1.38 0 0,0,0 0 0,0,0 70.5794392523364 13.6028108768714 54.234 196.118380062305 15.4641002138711 50.25 192.722741433022 15.305835624809 56.359 0 0 cat,chimp,dog,elephant,horse,human,macaque,marmoset,orangutan,panda,pig,rabbit, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0.0446545,NHEK@0,NHLF@0,SKNSHRA@0.010702, 0 0 0 0 ENSG00000256115.1 ENST00000536518.1 chr12:5347214-5352317 3 582 4517 intergenic -3.66 0 0,0,1 0 0,0,0 200.814432989691 28.4695594421076 144.255 237.26116838488 23.2740757139694 176.852 224.824742268041 25.0843480185964 173.251 0 0 cat,chimp,cow,dog,elephant,guinea_pig,horse,human,macaque,marmoset,mouse,orangutan,panda,pig,rabbit,rat, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0.0446545,NHEK@0,NHLF@0,SKNSHRA@0.010702, 0 0 0 0 ENSG00000256417.1 ENST00000537192.1 chr12:5399646-5487520 5 987 86879 intergenic -0.29 0 0,0,0 0 0,0,0 20.354609929078 13.2968266209326 0 50.0577507598784 14.5446080180481 0 59.1043566362715 14.6479011038341 0 0 0 chimp,horse,human,macaque,marmoset,orangutan,panda,pig, lincRNA lincRNA A549@0.0327895,AG04450@0.023606,BJ@0.0090065,GM12878@0.0040815,H1HESC@0.89518,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0.0041485,HUVEC@0.0823485,K562@0.261927,MCF7@1.68689,NHEK@0.121506,NHLF@0.006513,SKNSHRA@2.90936, 0 0 0 0 ENSG00000256146.1 ENST00000544842.1 chr12:5425127-5428513 1 3386 0 intergenic 0.67 0 0,0,0 0 0,0,0 0 0 0 0.271707028942705 0 3.107 2.59273479031305 0 3.263 0 1 human,macaque,orangutan, lincRNA lincRNA A549@0.001833,AG04450@0.00168,BJ@0.0010565,GM12878@0.002963,H1HESC@0.141426,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0.00556,K562@0.072834,MCF7@0.0894925,NHEK@0.039981,NHLF@0.0003905,SKNSHRA@0.344437, 0 0 0 0 ENSG00000256218.1 ENST00000543308.1 chr12:5475214-5476940 1 1726 0 intergenic 4.06 0 0,0,0 0 0,0,0 19.9594438006953 0 0 30.130359212051 0 0.744 30.2056778679027 0 0 0 0 chimp,human,macaque,orangutan,panda, lincRNA lincRNA A549@0,AG04450@0.0051915,BJ@0,GM12878@0,H1HESC@0.012012,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0.0145545,HUVEC@0.0030925,K562@0,MCF7@0,NHEK@0,NHLF@0.0067035,SKNSHRA@0, 0 0 0 0 ENSG00000256417.1 ENST00000537714.1 chr12:5480729-5492819 2 646 11442 intergenic 0.18 0 0,1,1 0 0,0,0 0 4.09456388743227 49.449 0 10.615888830624 72.328 0 11.859465128474 71.169 0 0 horse,human,panda, lincRNA lincRNA A549@0.0327895,AG04450@0.023606,BJ@0.0090065,GM12878@0.0040815,H1HESC@0.89518,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0.0041485,HUVEC@0.0823485,K562@0.261927,MCF7@1.68689,NHEK@0.121506,NHLF@0.006513,SKNSHRA@2.90936, 0 0 0 0 ENSG00000255983.1 ENST00000538430.1 chr12:5497755-5515817 5 1400 16654 intergenic 1.20 0 0,0,0 0 0,0,0 0 4.30491173291702 13.57 0.885714285714286 16.3722829350306 0 0.925 16.6871622433049 0 0 0 cat,chimp,dog,guinea_pig,horse,human,macaque,marmoset,orangutan,panda,pig,rabbit, lincRNA lincRNA A549@0.0083505,AG04450@0,BJ@0,GM12878@0.0033365,H1HESC@0.653139,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0.0014645,HUVEC@0.003461,K562@0.103606,MCF7@0.384553,NHEK@0.0409457,NHLF@0.0054935,SKNSHRA@2.09673, 0 0 0 0 ENSG00000255775.1 ENST00000539206.1 chr12:6264201-6269885 3 650 5030 intergenic 4.45 0 0,0,0 0 0,0,0 0 0 0 0 2.16938369781312 0 0 2.31809145129225 0 0 1 chimp,human,macaque,orangutan, lincRNA lincRNA A549@0,AG04450@0.0157575,BJ@0.0223435,GM12878@0,H1HESC@0.010143,HELAS3@0.0982585,HEPG2@0.0292405,HMEC@0,HSMM@0.103256,HUVEC@1.79598,K562@0,MCF7@0,NHEK@0,NHLF@0.111403,SKNSHRA@0.020514, 0 0 0 0 ENSG00000256433.1 ENST00000541888.1 chr12:6503071-6504235 3 721 439 intergenic 0.47 0 0,0,1 0 0,0,0 0 0 0 0 0 0 0 0 0 0 0 chimp,horse,human,macaque,marmoset,orangutan,panda,pig, lincRNA lincRNA A549@1.58466,AG04450@0.148599,BJ@0.114159,GM12878@0,H1HESC@0.0116275,HELAS3@1.27532,HEPG2@0.724961,HMEC@0.882267,HSMM@0.368901,HUVEC@0.199001,K562@0.391999,MCF7@1.14141,NHEK@0.803407,NHLF@0.605845,SKNSHRA@0, 0 0 0 0 ENSG00000215039.2 ENST00000535639.1 chr12:6548167-6560683 6 2358 10148 exonic 7.45 0 1,1,1 1 0,1,0 6.63273960983885 0 0 20.7298558100085 10.8453882538431 20.104 18.626802374894 9.65756799369334 20.299 0 0 chimp,human,macaque,marmoset,orangutan,panda, lincRNA processed_transcript A549@0.975193,AG04450@1.96216,BJ@3.62519,GM12878@9.12757,H1HESC@0.647753,HELAS3@0.672342,HEPG2@1.35106,HMEC@0.563903,HSMM@1.94709,HUVEC@1.88727,K562@0.104453,MCF7@7.83601,NHEK@0.881758,NHLF@3.07167,SKNSHRA@3.0012, 0 0 0 0 ENSG00000215039.2 ENST00000417058.2 chr12:6548324-6556939 3 1501 7110 intronic 7.45 0 0,0,1 0 0,1,0 0 0 0 0 11.2412095639944 0 0 10.457805907173 0 0 1 chimp,human,macaque, lincRNA processed_transcript A549@0.975193,AG04450@1.96216,BJ@3.62519,GM12878@9.12757,H1HESC@0.647753,HELAS3@0.672342,HEPG2@1.35106,HMEC@0.563903,HSMM@1.94709,HUVEC@1.88727,K562@0.104453,MCF7@7.83601,NHEK@0.881758,NHLF@3.07167,SKNSHRA@3.0012, 0 0 0 0 ENSG00000215039.2 ENST00000545339.1 chr12:6548327-6560733 7 1759 10635 exonic 7.45 0 1,1,1 1 0,1,0 0 1.47061589092619 0 10.8419556566231 13.1517630465444 20.104 9.8664013644116 11.7133991537377 20.299 0 0 chimp,human,macaque,marmoset,orangutan,panda, lincRNA processed_transcript A549@0.975193,AG04450@1.96216,BJ@3.62519,GM12878@9.12757,H1HESC@0.647753,HELAS3@0.672342,HEPG2@1.35106,HMEC@0.563903,HSMM@1.94709,HUVEC@1.88727,K562@0.104453,MCF7@7.83601,NHEK@0.881758,NHLF@3.07167,SKNSHRA@3.0012, 0 0 0 0 ENSG00000215039.2 ENST00000399492.2 chr12:6548405-6560668 7 1087 11164 exonic 7.45 0 1,1,1 1 0,1,0 0 1.40093156574704 0 13.506899724011 12.9470619849516 20.104 7.88500459981601 11.9451809387316 20.299 1 1 chimp,human,macaque,marmoset,orangutan, lincRNA processed_transcript A549@0.975193,AG04450@1.96216,BJ@3.62519,GM12878@9.12757,H1HESC@0.647753,HELAS3@0.672342,HEPG2@1.35106,HMEC@0.563903,HSMM@1.94709,HUVEC@1.88727,K562@0.104453,MCF7@7.83601,NHEK@0.881758,NHLF@3.07167,SKNSHRA@3.0012, 0 0 0 0 ENSG00000215039.2 ENST00000504270.2 chr12:6556782-6560681 3 697 3198 exonic 1.46 0 0,1,0 1 0,0,0 0 4.89055659787367 0 0 24.7961225766104 20.104 0 21.1294559099437 20.299 0 0 chimp,human,rabbit, lincRNA processed_transcript A549@0.975193,AG04450@1.96216,BJ@3.62519,GM12878@9.12757,H1HESC@0.647753,HELAS3@0.672342,HEPG2@1.35106,HMEC@0.563903,HSMM@1.94709,HUVEC@1.88727,K562@0.104453,MCF7@7.83601,NHEK@0.881758,NHLF@3.07167,SKNSHRA@3.0012, 0 0 0 0 ENSG00000215039.2 ENST00000536388.1 chr12:6556939-6560700 5 860 2893 exonic 1.46 0 0,1,1 1 0,0,0 0 5.40615278257864 0 19.7697674418605 21.4279294849637 20.104 19.1197674418605 17.5682682336675 20.299 0 0 chimp,cow,human,macaque,marmoset,orangutan,pig,rabbit, lincRNA processed_transcript A549@0.975193,AG04450@1.96216,BJ@3.62519,GM12878@9.12757,H1HESC@0.647753,HELAS3@0.672342,HEPG2@1.35106,HMEC@0.563903,HSMM@1.94709,HUVEC@1.88727,K562@0.104453,MCF7@7.83601,NHEK@0.881758,NHLF@3.07167,SKNSHRA@3.0012, 0 0 0 0 ENSG00000215039.2 ENST00000447687.2 chr12:6556996-6557951 2 465 488 intronic 1.46 0 0,0,1 0 0,0,0 0 0 0 0 0 0 0 0 0 0 0 chimp,guinea_pig,human,marmoset,orangutan, lincRNA processed_transcript A549@0.975193,AG04450@1.96216,BJ@3.62519,GM12878@9.12757,H1HESC@0.647753,HELAS3@0.672342,HEPG2@1.35106,HMEC@0.563903,HSMM@1.94709,HUVEC@1.88727,K562@0.104453,MCF7@7.83601,NHEK@0.881758,NHLF@3.07167,SKNSHRA@3.0012, 0 0 0 0 ENSG00000215039.2 ENST00000537003.1 chr12:6557156-6560678 4 939 2577 exonic 0.73 0 0,1,0 1 0,0,0 0 6.06907256499806 0 20.3099041533546 23.2611563833915 20.104 18.482428115016 19.4866123399301 20.299 0 0 chimp,cow,dog,elephant,horse,human,macaque,marmoset,orangutan,panda,pig,rabbit, lincRNA processed_transcript A549@0.975193,AG04450@1.96216,BJ@3.62519,GM12878@9.12757,H1HESC@0.647753,HELAS3@0.672342,HEPG2@1.35106,HMEC@0.563903,HSMM@1.94709,HUVEC@1.88727,K562@0.104453,MCF7@7.83601,NHEK@0.881758,NHLF@3.07167,SKNSHRA@3.0012, 0 0 0 0 ENSG00000215039.2 ENST00000538616.1 chr12:6559577-6560615 2 655 381 exonic -32.52 0 0,1,1 1 0,0,0 4.56488549618321 32.5984251968504 0 34.0519083969466 66.7034120734908 20.104 33.4229007633588 56.9055118110236 20.299 0 0 cat,chimp,cow,dog,elephant,horse,human,macaque,marmoset,orangutan,panda,pig, lincRNA processed_transcript A549@0.975193,AG04450@1.96216,BJ@3.62519,GM12878@9.12757,H1HESC@0.647753,HELAS3@0.672342,HEPG2@1.35106,HMEC@0.563903,HSMM@1.94709,HUVEC@1.88727,K562@0.104453,MCF7@7.83601,NHEK@0.881758,NHLF@3.07167,SKNSHRA@3.0012, 0 0 0 0 ENSG00000256329.1 ENST00000541782.1 chr12:6619441-6619688 1 247 0 intronic 0 0 0,0,0 0 0,0,0 464.105263157895 0 51.792 256.85020242915 0 115.612 203.765182186235 0 106.743 0 0 chimp,cow,dog,elephant,guinea_pig,horse,human,macaque,marmoset,mouse,opossum,orangutan,panda,rabbit,rat, antisense ncrna_host A549@398.303,AG04450@400.975,BJ@246.914,GM12878@347.187,H1HESC@94.7741,HELAS3@318.5,HEPG2@277.758,HMEC@87.6084,HSMM@53.5009,HUVEC@165.123,K562@232.92,MCF7@130.065,NHEK@125.579,NHLF@33.7447,SKNSHRA@298.697, 0 0 0 0 ENSG00000255966.1 ENST00000537921.1 chr12:6641456-6642664 2 475 731 intergenic -1.29 0 0,1,0 1 0,0,0 9.2 17.0424076607387 47.768 15.4336842105263 57.7127222982216 44.433 12.08 51.1504787961696 49.14 0 0 cat,chimp,cow,elephant,horse,human,macaque,marmoset,orangutan, antisense antisense A549@1.17382,AG04450@0.194956,BJ@0.487322,GM12878@2.37025,H1HESC@0.824223,HELAS3@1.46431,HEPG2@1.90959,HMEC@0.017168,HSMM@0.268642,HUVEC@0.235403,K562@0.642443,MCF7@0.583519,NHEK@0.0969783,NHLF@0.0528595,SKNSHRA@1.11524, 0 0 0 0 ENSG00000245667.2 ENST00000499202.2 chr12:6652670-6654097 2 558 867 intronic -0.38 0 0,0,0 0 0,0,0 0 0 0 0 0 0 0 0 0 0 0 chimp,human,macaque,panda, antisense antisense A549@0,AG04450@0.0052865,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0.021317,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000247853.2 ENST00000501075.2 chr12:6687788-6693905 2 2194 3921 exonic 5.88 0 0,0,1 0 0,0,0 165.896991795807 74.8355011476664 194.381 217.255697356427 90.985207855139 242.31 215.472196900638 96.2994134149452 227.925 0 0 chimp,horse,human,macaque,marmoset,orangutan, antisense ncrna_host A549@0.340921,AG04450@0.132319,BJ@0.134165,GM12878@0.143771,H1HESC@0.0105395,HELAS3@0.281721,HEPG2@0.200964,HMEC@0.048479,HSMM@0.0369925,HUVEC@0.043447,K562@0.0252465,MCF7@0.26774,NHEK@0.122149,NHLF@0.0971355,SKNSHRA@0.166951, 0 0 0 0 ENSG00000257084.1 ENST00000537269.1 chr12:7072409-7073610 2 348 851 intergenic 0.47 0 1,1,1 1 0,0,0 33.9683908045977 82.689776733255 57.211 115.034482758621 158.673325499412 81.478 82.2270114942529 124.841363102233 85.265 0 0 cat,chimp,cow,dog,elephant,horse,human,macaque,marmoset,mouse,orangutan,panda,rabbit,rat, antisense antisense A549@0.0636165,AG04450@0,BJ@0,GM12878@0.0057595,H1HESC@0.015385,HELAS3@0,HEPG2@0,HMEC@0.128688,HSMM@0,HUVEC@0,K562@0.006634,MCF7@0.09308,NHEK@0.764017,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000126749.7 ENST00000261406.6 chr12:7079944-7085165 7 1062 4147 exonic 26.70 0 1,1,1 1 0,1,1 168.840866290019 4.5273691825416 41.114 292.074387947269 3.23607427055703 182.675 365.640301318267 3.84977091873644 176.998 0 0 cat,chimp,cow,dog,elephant,guinea_pig,horse,human,macaque,marmoset,orangutan,panda,rabbit, antisense antisense A549@19.7383,AG04450@14.6907,BJ@13.8109,GM12878@10.9367,H1HESC@16.0403,HELAS3@31.7948,HEPG2@14.3676,HMEC@13.5005,HSMM@7.29237,HUVEC@12.3555,K562@17.598,MCF7@13.0431,NHEK@15.0419,NHLF@14.5131,SKNSHRA@8.14016, 0 0 0 0 ENSG00000126749.7 ENST00000546220.1 chr12:7080056-7085781 6 1569 4146 exonic 14.31 0 0,1,0 1 0,1,1 190.333333333333 4.45610226724554 41.114 260.738049713193 3.10057887120116 194.906 273.139579349904 3.71128798842258 185.029 0 0 cat,chimp,dog,elephant,guinea_pig,horse,human,macaque,marmoset,orangutan,panda,rabbit, antisense antisense A549@19.7383,AG04450@14.6907,BJ@13.8109,GM12878@10.9367,H1HESC@16.0403,HELAS3@31.7948,HEPG2@14.3676,HMEC@13.5005,HSMM@7.29237,HUVEC@12.3555,K562@17.598,MCF7@13.0431,NHEK@15.0419,NHLF@14.5131,SKNSHRA@8.14016, 0 0 0 0 ENSG00000126749.7 ENST00000539440.1 chr12:7080076-7084735 4 1218 3435 intergenic 6.09 0 0,1,0 1 0,1,1 119.879310344828 3.35021834061135 41.114 213.775041050903 2.35109170305677 196.64 221.53776683087 2.52605531295488 186.449 0 0 chimp,dog,elephant,guinea_pig,horse,human,macaque,marmoset,orangutan,panda, antisense retained_intron A549@19.7383,AG04450@14.6907,BJ@13.8109,GM12878@10.9367,H1HESC@16.0403,HELAS3@31.7948,HEPG2@14.3676,HMEC@13.5005,HSMM@7.29237,HUVEC@12.3555,K562@17.598,MCF7@13.0431,NHEK@15.0419,NHLF@14.5131,SKNSHRA@8.14016, 0 0 0 0 ENSG00000126749.7 ENST00000439543.2 chr12:7080079-7095921 7 667 15163 intronic 1.00 0 1,1,1 1 0,1,1 206.683658170915 50.9465804919871 41.114 379.11844077961 56.9456571918486 196.64 390.454272863568 58.4151553122733 186.449 0 0 cat,chimp,cow,dog,elephant,guinea_pig,horse,human,macaque,marmoset,mouse,orangutan,panda,rabbit,rat, antisense antisense A549@19.7383,AG04450@14.6907,BJ@13.8109,GM12878@10.9367,H1HESC@16.0403,HELAS3@31.7948,HEPG2@14.3676,HMEC@13.5005,HSMM@7.29237,HUVEC@12.3555,K562@17.598,MCF7@13.0431,NHEK@15.0419,NHLF@14.5131,SKNSHRA@8.14016, 0 0 0 0 ENSG00000126749.7 ENST00000451846.2 chr12:7080098-7084063 2 717 3246 intergenic 6.09 0 0,1,0 1 0,1,1 156.125523012552 1.94423906346272 41.114 237.177126917713 1.43807763401109 202.784 244.887029288703 1.54282193468885 193.361 0 0 cat,chimp,cow,elephant,guinea_pig,horse,human,macaque,marmoset,orangutan,panda,rabbit, antisense retained_intron A549@19.7383,AG04450@14.6907,BJ@13.8109,GM12878@10.9367,H1HESC@16.0403,HELAS3@31.7948,HEPG2@14.3676,HMEC@13.5005,HSMM@7.29237,HUVEC@12.3555,K562@17.598,MCF7@13.0431,NHEK@15.0419,NHLF@14.5131,SKNSHRA@8.14016, 0 0 0 0 ENSG00000126749.7 ENST00000541016.1 chr12:7080123-7084541 5 642 3768 intergenic 0 0 1,1,1 1 0,1,1 219.841121495327 3.42914012738854 41.114 476.110591900311 2.85456475583864 206.717 474.864485981308 3.02733545647558 197.969 0 0 cat,chimp,cow,dog,elephant,guinea_pig,horse,human,macaque,marmoset,mouse,orangutan,panda,rabbit,rat, antisense antisense A549@19.7383,AG04450@14.6907,BJ@13.8109,GM12878@10.9367,H1HESC@16.0403,HELAS3@31.7948,HEPG2@14.3676,HMEC@13.5005,HSMM@7.29237,HUVEC@12.3555,K562@17.598,MCF7@13.0431,NHEK@15.0419,NHLF@14.5131,SKNSHRA@8.14016, 0 0 0 0 ENSG00000126749.7 ENST00000539196.1 chr12:7080223-7085139 5 611 4297 intergenic 13.68 0 1,1,1 1 0,1,1 252.42062193126 7.6879218059111 52.514 327.345335515548 15.5396788457063 241.241 361.713584288052 16.337910169886 227.565 0 0 cat,chimp,cow,dog,elephant,guinea_pig,horse,human,macaque,marmoset,opossum,orangutan,panda,rabbit,rat, antisense antisense A549@19.7383,AG04450@14.6907,BJ@13.8109,GM12878@10.9367,H1HESC@16.0403,HELAS3@31.7948,HEPG2@14.3676,HMEC@13.5005,HSMM@7.29237,HUVEC@12.3555,K562@17.598,MCF7@13.0431,NHEK@15.0419,NHLF@14.5131,SKNSHRA@8.14016, 0 0 0 0 ENSG00000205885.3 ENST00000435921.2 chr12:7260648-7264202 3 569 2981 intronic 7.56 0 0,1,1 0 0,1,0 0 16.6172425360617 0 0 33.7420328748742 7.905 0 34.1445823549145 8.432 1 1 chimp,human,macaque,marmoset,orangutan, antisense antisense A549@6.26374,AG04450@2.27643,BJ@2.52727,GM12878@3.91485,H1HESC@0.618815,HELAS3@5.00068,HEPG2@3.00008,HMEC@4.92035,HSMM@0.294779,HUVEC@0.407525,K562@1.14489,MCF7@0.0033105,NHEK@2.79175,NHLF@1.04999,SKNSHRA@1.14033, 0 0 0 0 ENSG00000205885.3 ENST00000541775.1 chr12:7260904-7274447 12 5260 8261 exonic 3.39 0 1,1,1 1 0,1,0 5.65551330798479 6.25590122261227 19.229 9.68536121673004 15.3678731388452 24.943 8.29372623574145 15.5165234233144 26.828 0 1 chimp,human,macaque,orangutan, antisense antisense A549@6.26374,AG04450@2.27643,BJ@2.52727,GM12878@3.91485,H1HESC@0.618815,HELAS3@5.00068,HEPG2@3.00008,HMEC@4.92035,HSMM@0.294779,HUVEC@0.407525,K562@1.14489,MCF7@0.0033105,NHEK@2.79175,NHLF@1.04999,SKNSHRA@1.14033, 0 0 0 0 ENSG00000205885.3 ENST00000536679.1 chr12:7261167-7263066 2 548 1349 intronic -4.59 0 1,1,1 1 0,1,0 0 0 38.976 0 23.833209785026 64.099 0 26.9014084507042 57.816 1 1 chimp,human,macaque,marmoset,orangutan, antisense antisense A549@6.26374,AG04450@2.27643,BJ@2.52727,GM12878@3.91485,H1HESC@0.618815,HELAS3@5.00068,HEPG2@3.00008,HMEC@4.92035,HSMM@0.294779,HUVEC@0.407525,K562@1.14489,MCF7@0.0033105,NHEK@2.79175,NHLF@1.04999,SKNSHRA@1.14033, 0 0 0 0 ENSG00000205885.3 ENST00000382215.3 chr12:7261167-7273623 8 2078 10364 intronic 0.74 0 0,1,1 1 0,1,0 5.08180943214629 0 38.976 5.8902791145332 3.5754534928599 64.099 6.28296438883542 4.26669239675801 57.816 0 1 chimp,human,macaque,marmoset, antisense antisense A549@6.26374,AG04450@2.27643,BJ@2.52727,GM12878@3.91485,H1HESC@0.618815,HELAS3@5.00068,HEPG2@3.00008,HMEC@4.92035,HSMM@0.294779,HUVEC@0.407525,K562@1.14489,MCF7@0.0033105,NHEK@2.79175,NHLF@1.04999,SKNSHRA@1.14033, 0 0 0 0 ENSG00000205885.3 ENST00000545775.1 chr12:7271602-7274444 4 328 2508 intergenic -0.41 0 0,1,1 0 0,1,0 0 0 0 0 1.67783094098884 0 0 1.73524720893142 0 0 0 cat,chimp,dog,elephant,horse,human,macaque,marmoset,orangutan,panda,pig,rabbit, antisense antisense A549@6.26374,AG04450@2.27643,BJ@2.52727,GM12878@3.91485,H1HESC@0.618815,HELAS3@5.00068,HEPG2@3.00008,HMEC@4.92035,HSMM@0.294779,HUVEC@0.407525,K562@1.14489,MCF7@0.0033105,NHEK@2.79175,NHLF@1.04999,SKNSHRA@1.14033, 0 0 0 0 ENSG00000205885.3 ENST00000535078.1 chr12:7273154-7275097 2 323 1618 intergenic -0.14 0 0,0,1 0 0,1,0 0 0 0 0 2.60074165636588 0 0 2.68974042027194 0 0 0 cat,chimp,dog,elephant,horse,human,macaque,marmoset,orangutan,panda,pig, antisense antisense A549@6.26374,AG04450@2.27643,BJ@2.52727,GM12878@3.91485,H1HESC@0.618815,HELAS3@5.00068,HEPG2@3.00008,HMEC@4.92035,HSMM@0.294779,HUVEC@0.407525,K562@1.14489,MCF7@0.0033105,NHEK@2.79175,NHLF@1.04999,SKNSHRA@1.14033, 0 0 0 0 ENSG00000256967.1 ENST00000544657.1 chr12:7281675-7282848 2 747 424 exonic 0 0 0,1,1 1 0,0,0 49.9759036144578 0 58.919 87.4872824631861 0 161.377 88.4698795180723 0 152.068 0 0 cat,chimp,cow,dog,elephant,guinea_pig,horse,human,macaque,marmoset,orangutan,panda,pig,rabbit, antisense antisense A549@0,AG04450@0.0287015,BJ@0.0131645,GM12878@0.0299265,H1HESC@0.179967,HELAS3@0.230989,HEPG2@0.954306,HMEC@0,HSMM@0,HUVEC@0.019728,K562@0.121886,MCF7@0.043655,NHEK@0.00175867,NHLF@0.044761,SKNSHRA@0.140253, 0 0 0 0 ENSG00000256967.1 ENST00000538062.1 chr12:7282104-7283794 3 732 954 exonic 1.50 1 0,0,1 0 0,0,0 49.870218579235 55.6708595387841 13.727 80.6844262295082 160.825995807128 43.897 68.9234972677596 154.875262054507 36.616 0 0 chimp,cow,human,macaque,marmoset,orangutan,rabbit, antisense antisense A549@0,AG04450@0.0287015,BJ@0.0131645,GM12878@0.0299265,H1HESC@0.179967,HELAS3@0.230989,HEPG2@0.954306,HMEC@0,HSMM@0,HUVEC@0.019728,K562@0.121886,MCF7@0.043655,NHEK@0.00175867,NHLF@0.044761,SKNSHRA@0.140253, 0 0 0 0 ENSG00000255572.1 ENST00000543061.1 chr12:7319270-7341665 2 438 21955 exonic 0.78 0 0,0,1 0 0,0,0 17.4611872146119 0.655522659986336 10.038 54.3013698630137 0.719335003416078 22.856 56.7990867579909 1.68649510362104 21.81 0 0 cat,chimp,cow,dog,elephant,guinea_pig,horse,human,macaque,marmoset,mouse,orangutan,panda,pig,rat, antisense antisense A549@0.0398305,AG04450@0,BJ@0,GM12878@0.165794,H1HESC@0,HELAS3@0.0361905,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0.0367285,MCF7@0,NHEK@0.0309933,NHLF@0,SKNSHRA@0.048577, 0 0 0 0 ENSG00000255572.1 ENST00000545794.1 chr12:7322381-7341620 3 487 18748 exonic 1.49 0 0,1,0 0 0,0,0 0 0.767655216556433 17.925 35.5687885010267 0.200394708768935 29.677 37.6673511293634 0.75773415831022 28.707 0 0 chimp,elephant,human,macaque,orangutan,panda, antisense antisense A549@0.0398305,AG04450@0,BJ@0,GM12878@0.165794,H1HESC@0,HELAS3@0.0361905,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0.0367285,MCF7@0,NHEK@0.0309933,NHLF@0,SKNSHRA@0.048577, 0 0 0 0 ENSG00000226711.2 ENST00000456135.2 chr12:8332805-8356982 4 1212 22959 intergenic 2.78 0 0,1,0 1 0,1,0 0 0 0 0 0 0 68.2475247524752 15.8332244435733 5.18 0 1 chimp,human,macaque,orangutan, antisense antisense A549@1.49886,AG04450@0.747526,BJ@1.24303,GM12878@0.188544,H1HESC@0.377112,HELAS3@0.050349,HEPG2@0.044123,HMEC@0.051824,HSMM@0.189831,HUVEC@0.293052,K562@0.010012,MCF7@0.613854,NHEK@0.137666,NHLF@0.683163,SKNSHRA@2.66303, 8 6 5 6 ENSG00000226711.2 ENST00000454799.2 chr12:8332805-8368747 7 2160 33770 intergenic 2.78 0 0,1,0 1 0,1,0 0 0 0 0 0 0 38.2944444444444 10.7644358898431 5.18 0 1 chimp,human, antisense antisense A549@1.49886,AG04450@0.747526,BJ@1.24303,GM12878@0.188544,H1HESC@0.377112,HELAS3@0.050349,HEPG2@0.044123,HMEC@0.051824,HSMM@0.189831,HUVEC@0.293052,K562@0.010012,MCF7@0.613854,NHEK@0.137666,NHLF@0.683163,SKNSHRA@2.66303, 72 2 41 2 ENSG00000226711.2 ENST00000544214.1 chr12:8332818-8353596 6 2617 18151 intergenic 2.78 1 0,1,0 1 0,1,0 0 0 0 0 0 0 31.6071837982423 20.0272712247259 5.18 0 1 chimp,human, antisense antisense A549@1.49886,AG04450@0.747526,BJ@1.24303,GM12878@0.188544,H1HESC@0.377112,HELAS3@0.050349,HEPG2@0.044123,HMEC@0.051824,HSMM@0.189831,HUVEC@0.293052,K562@0.010012,MCF7@0.613854,NHEK@0.137666,NHLF@0.683163,SKNSHRA@2.66303, 0 0 0 0 ENSG00000226711.2 ENST00000541558.1 chr12:8332865-8352477 8 2079 17519 intergenic 2.78 1 1,1,1 1 0,1,0 0 0 0 0 0 0 39.7864357864358 20.7497574062447 5.18 0 1 chimp,human, antisense antisense A549@1.49886,AG04450@0.747526,BJ@1.24303,GM12878@0.188544,H1HESC@0.377112,HELAS3@0.050349,HEPG2@0.044123,HMEC@0.051824,HSMM@0.189831,HUVEC@0.293052,K562@0.010012,MCF7@0.613854,NHEK@0.137666,NHLF@0.683163,SKNSHRA@2.66303, 0 0 0 0 ENSG00000226711.2 ENST00000372173.5 chr12:8341081-8368631 4 674 26870 intergenic 1.46 0 0,0,0 0 0,1,0 0 0 0 0 0 0 0 0 13.872 1 1 chimp,human,macaque,marmoset,orangutan, antisense antisense A549@1.49886,AG04450@0.747526,BJ@1.24303,GM12878@0.188544,H1HESC@0.377112,HELAS3@0.050349,HEPG2@0.044123,HMEC@0.051824,HSMM@0.189831,HUVEC@0.293052,K562@0.010012,MCF7@0.613854,NHEK@0.137666,NHLF@0.683163,SKNSHRA@2.66303, 0 0 0 0 ENSG00000226711.2 ENST00000535567.1 chr12:8346127-8356724 6 718 9869 intergenic 0.19 0 0,0,0 0 0,1,0 0 0 0 0 0 0 0 0 0 0 1 chimp,human, antisense antisense A549@1.49886,AG04450@0.747526,BJ@1.24303,GM12878@0.188544,H1HESC@0.377112,HELAS3@0.050349,HEPG2@0.044123,HMEC@0.051824,HSMM@0.189831,HUVEC@0.293052,K562@0.010012,MCF7@0.613854,NHEK@0.137666,NHLF@0.683163,SKNSHRA@2.66303, 0 0 0 0 ENSG00000226711.2 ENST00000420514.2 chr12:8346800-8349114 3 605 1705 intergenic 1.46 0 0,0,0 0 0,1,0 0 0 0 0 0 0 0 0 0 0 1 chimp,human, antisense antisense A549@1.49886,AG04450@0.747526,BJ@1.24303,GM12878@0.188544,H1HESC@0.377112,HELAS3@0.050349,HEPG2@0.044123,HMEC@0.051824,HSMM@0.189831,HUVEC@0.293052,K562@0.010012,MCF7@0.613854,NHEK@0.137666,NHLF@0.683163,SKNSHRA@2.66303, 0 0 0 0 ENSG00000226711.2 ENST00000438689.2 chr12:8346895-8347872 4 499 472 intergenic -2.17 0 0,0,0 0 0,1,0 0 0 0 0 0 0 0 0 0 1 1 chimp,human,macaque,marmoset,orangutan, antisense antisense A549@1.49886,AG04450@0.747526,BJ@1.24303,GM12878@0.188544,H1HESC@0.377112,HELAS3@0.050349,HEPG2@0.044123,HMEC@0.051824,HSMM@0.189831,HUVEC@0.293052,K562@0.010012,MCF7@0.613854,NHEK@0.137666,NHLF@0.683163,SKNSHRA@2.66303, 0 0 0 0 ENSG00000226711.2 ENST00000540566.1 chr12:8347026-8348248 3 493 725 intergenic -1.06 0 0,0,0 0 0,1,0 0 0 0 0 0 0 0 0 0 0 1 chimp,human,marmoset, antisense antisense A549@1.49886,AG04450@0.747526,BJ@1.24303,GM12878@0.188544,H1HESC@0.377112,HELAS3@0.050349,HEPG2@0.044123,HMEC@0.051824,HSMM@0.189831,HUVEC@0.293052,K562@0.010012,MCF7@0.613854,NHEK@0.137666,NHLF@0.683163,SKNSHRA@2.66303, 0 0 0 0 ENSG00000215241.3 ENST00000304751.9 chr12:8388011-8391542 2 793 2736 intergenic 9.87 1 0,0,1 0 0,0,0 0 0 0 18.6885245901639 14.0380116959064 4.464 122.017654476671 23.3234649122807 35.892 0 0 cat,chimp,dog,guinea_pig,horse,human,macaque,marmoset,orangutan,panda, lincRNA lincRNA A549@0.0436175,AG04450@0.259745,BJ@1.01986,GM12878@1.02894,H1HESC@0.139192,HELAS3@0.026252,HEPG2@0.044006,HMEC@0,HSMM@0.10921,HUVEC@0.235356,K562@1.28802,MCF7@0.005115,NHEK@0.084537,NHLF@0.343587,SKNSHRA@0.234663, 0 0 0 0 ENSG00000215241.3 ENST00000399866.3 chr12:8388478-8390769 2 515 1774 intergenic -6.74 1 0,0,0 0 0,0,0 0 0 0 0 13.6313416009019 15.504 0 22.4391206313416 122.683 0 1 chimp,human,macaque,orangutan, lincRNA lincRNA A549@0.0436175,AG04450@0.259745,BJ@1.01986,GM12878@1.02894,H1HESC@0.139192,HELAS3@0.026252,HEPG2@0.044006,HMEC@0,HSMM@0.10921,HUVEC@0.235356,K562@1.28802,MCF7@0.005115,NHEK@0.084537,NHLF@0.343587,SKNSHRA@0.234663, 2 44 0 0 ENSG00000215241.3 ENST00000536034.1 chr12:8388526-8395160 3 448 6182 intergenic 2.32 1 0,0,1 0 0,0,0 0 0 0 8.4375 10.2940795858945 15.504 11.8125 14.5886444516338 122.683 0 0 chimp,dog,human,macaque,marmoset,orangutan,panda, lincRNA lincRNA A549@0.0436175,AG04450@0.259745,BJ@1.01986,GM12878@1.02894,H1HESC@0.139192,HELAS3@0.026252,HEPG2@0.044006,HMEC@0,HSMM@0.10921,HUVEC@0.235356,K562@1.28802,MCF7@0.005115,NHEK@0.084537,NHLF@0.343587,SKNSHRA@0.234663, 0 0 0 0 ENSG00000250937.2 ENST00000509919.2 chr12:8404007-8450140 6 1577 44546 intergenic 5.82 0 0,0,1 0 0,0,0 0 0 0 0.199112238427394 4.06887262604948 0 2.53392517438174 14.3687648722669 0 0 0 chimp,horse,human,macaque,marmoset,orangutan, lincRNA lincRNA A549@0.016952,AG04450@0.041356,BJ@0.152554,GM12878@0.027235,H1HESC@0.416809,HELAS3@0.018458,HEPG2@0.034664,HMEC@0.020693,HSMM@0.0256775,HUVEC@0.0288065,K562@0.0293875,MCF7@0.0459945,NHEK@0.0441357,NHLF@0.029377,SKNSHRA@0.0375935, 0 0 0 0 ENSG00000226091.2 ENST00000536864.1 chr12:8448582-8549399 6 3025 97782 intergenic 20.73 0 0,1,0 0 0,0,0 0 0 0 32.7332231404959 5.46969789940889 0 62.6892561983471 18.5857417520607 72.534 0 1 chimp,human,marmoset, processed_transcript processed_transcript A549@0.114326,AG04450@0,BJ@0.119086,GM12878@0.0104375,H1HESC@0.802196,HELAS3@0.002461,HEPG2@0.0019335,HMEC@0.01064,HSMM@0.00448,HUVEC@0.0088525,K562@0.0273625,MCF7@0.184677,NHEK@0.00552567,NHLF@0.0589635,SKNSHRA@0.018809, 0 0 0 0 ENSG00000226091.2 ENST00000544461.1 chr12:8448582-8549399 5 3028 97781 intergenic 20.73 0 0,1,0 0 0,0,0 0 0 0 32.7007926023778 5.46975383765762 0 62.9134742404227 18.5829762428284 72.534 0 1 chimp,human,marmoset, processed_transcript processed_transcript A549@0.114326,AG04450@0,BJ@0.119086,GM12878@0.0104375,H1HESC@0.802196,HELAS3@0.002461,HEPG2@0.0019335,HMEC@0.01064,HSMM@0.00448,HUVEC@0.0088525,K562@0.0273625,MCF7@0.184677,NHEK@0.00552567,NHLF@0.0589635,SKNSHRA@0.018809, 0 0 0 0 ENSG00000256552.1 ENST00000537764.1 chr12:8472977-8522151 2 618 48554 intergenic 2.75 0 0,0,0 0 0,0,0 0 0 0 0 6.40472463648721 0 384.333333333333 24.8027145034395 0 0 0 cat,chimp,cow,dog,elephant,guinea_pig,horse,human,macaque,marmoset,mouse,opossum,orangutan,panda,pig,rabbit,rat, processed_transcript processed_transcript A549@0.004455,AG04450@0.003615,BJ@0.027322,GM12878@0.01041,H1HESC@0.004694,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0.0094295,HUVEC@0,K562@0.009492,MCF7@0.003316,NHEK@0,NHLF@0.0315525,SKNSHRA@0, 0 0 0 0 ENSG00000256101.1 ENST00000535746.1 chr12:8474472-8482210 3 600 7134 intergenic 2.72 1 0,0,0 0 0,0,0 0 0 0 38.6466666666667 4.66778805719092 0 57.9983333333333 5.5677039529016 0 0 1 chimp,human,orangutan, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0.028522,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0.0874715,MCF7@0,NHEK@0.002117,NHLF@0,SKNSHRA@0, 137 2 0 0 ENSG00000256101.1 ENST00000539795.1 chr12:8474549-8482210 3 599 7058 intergenic 6.04 1 0,0,0 0 0,0,0 0 0 0 38.7111853088481 4.71805043921791 0 58.0951585976628 5.62765655993199 0 0 1 chimp,human,orangutan, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0.028522,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0.0874715,MCF7@0,NHEK@0.002117,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000226091.2 ENST00000537659.1 chr12:8509559-8527109 4 620 16924 intergenic 1.06 1 0,0,0 0 0,0,0 0 0 0 0 6.6720042543134 0 0 66.5565469156228 0 1 1 chimp,human,macaque,marmoset,orangutan, processed_transcript processed_transcript A549@0.114326,AG04450@0,BJ@0.119086,GM12878@0.0104375,H1HESC@0.802196,HELAS3@0.002461,HEPG2@0.0019335,HMEC@0.01064,HSMM@0.00448,HUVEC@0.0088525,K562@0.0273625,MCF7@0.184677,NHEK@0.00552567,NHLF@0.0589635,SKNSHRA@0.018809, 0 0 0 0 ENSG00000226091.2 ENST00000539348.1 chr12:8509559-8542933 3 444 32926 intergenic 0 1 0,1,0 0 0,0,0 0 0 0 24.1216216216216 8.55220798153435 22.413 26.2972972972973 40.5131810727085 35.566 0 0 chimp,elephant,human,macaque,marmoset,orangutan, processed_transcript processed_transcript A549@0.114326,AG04450@0,BJ@0.119086,GM12878@0.0104375,H1HESC@0.802196,HELAS3@0.002461,HEPG2@0.0019335,HMEC@0.01064,HSMM@0.00448,HUVEC@0.0088525,K562@0.0273625,MCF7@0.184677,NHEK@0.00552567,NHLF@0.0589635,SKNSHRA@0.018809, 0 0 0 0 ENSG00000226091.2 ENST00000420040.2 chr12:8509559-8543348 2 660 33127 intergenic 17.11 1 0,1,0 0 0,0,0 0 0 0 56.7545454545455 8.369456938449 0 70.8909090909091 40.1247019047907 12.614 0 0 cat,chimp,cow,dog,elephant,guinea_pig,horse,human,macaque,marmoset,orangutan,panda, processed_transcript processed_transcript A549@0.114326,AG04450@0,BJ@0.119086,GM12878@0.0104375,H1HESC@0.802196,HELAS3@0.002461,HEPG2@0.0019335,HMEC@0.01064,HSMM@0.00448,HUVEC@0.0088525,K562@0.0273625,MCF7@0.184677,NHEK@0.00552567,NHLF@0.0589635,SKNSHRA@0.018809, 0 0 0 0 ENSG00000226091.2 ENST00000536560.1 chr12:8535440-8538323 2 270 2611 intergenic 0 0 0,0,0 0 0,0,0 0 0 0 0 0 38.19 0 0 40.626 0 0 chimp,elephant,horse,human,macaque,marmoset,orangutan,panda, processed_transcript processed_transcript A549@0.114326,AG04450@0,BJ@0.119086,GM12878@0.0104375,H1HESC@0.802196,HELAS3@0.002461,HEPG2@0.0019335,HMEC@0.01064,HSMM@0.00448,HUVEC@0.0088525,K562@0.0273625,MCF7@0.184677,NHEK@0.00552567,NHLF@0.0589635,SKNSHRA@0.018809, 0 0 0 0 ENSG00000226091.2 ENST00000538304.1 chr12:8536701-8549091 7 2150 10228 intergenic 12.26 1 0,0,0 0 0,0,0 0 0 0 21.4060465116279 10.0528940164255 38.01 28.9548837209302 16.8224481814627 77.923 0 1 chimp,human,macaque,orangutan, processed_transcript processed_transcript A549@0.114326,AG04450@0,BJ@0.119086,GM12878@0.0104375,H1HESC@0.802196,HELAS3@0.002461,HEPG2@0.0019335,HMEC@0.01064,HSMM@0.00448,HUVEC@0.0088525,K562@0.0273625,MCF7@0.184677,NHEK@0.00552567,NHLF@0.0589635,SKNSHRA@0.018809, 70 2 39 2 ENSG00000226091.2 ENST00000536539.1 chr12:8536713-8543016 2 454 5847 intergenic -4.39 1 0,0,0 0 0,0,0 0 0 0 33.1387665198238 15.0822644090987 22.413 36.1277533039648 19.2529502308876 43 0 1 chimp,human,marmoset,orangutan, processed_transcript processed_transcript A549@0.114326,AG04450@0,BJ@0.119086,GM12878@0.0104375,H1HESC@0.802196,HELAS3@0.002461,HEPG2@0.0019335,HMEC@0.01064,HSMM@0.00448,HUVEC@0.0088525,K562@0.0273625,MCF7@0.184677,NHEK@0.00552567,NHLF@0.0589635,SKNSHRA@0.018809, 2 44 0 0 ENSG00000255801.1 ENST00000542819.1 chr12:8700957-8720209 3 559 18689 intergenic -12.05 0 0,0,0 0 0,0,0 0 0 23.422 0 0.817004655144738 24.99 0 1.05083204023757 26.656 0 0 chimp,dog,horse,human,macaque,marmoset,orangutan, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0.0048535,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000255829.1 ENST00000539089.1 chr12:8816607-8821576 2 451 4516 intergenic 2.03 0 0,0,0 0 0,0,0 0 19.3666961913198 0 0 29.2838795394154 0 0 24.7398139946856 3.012 0 0 chimp,human,macaque,orangutan,rabbit, antisense antisense A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0.0468695,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000255829.1 ENST00000544922.1 chr12:8816633-8821607 2 460 4512 intergenic 2.03 0 0,0,0 0 0,0,0 0 19.383865248227 0 0 29.3098404255319 0 0 24.7617464539007 3.012 0 0 cat,chimp,human,macaque,orangutan, antisense antisense A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0.0468695,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000256661.1 ENST00000537288.1 chr12:8928815-8983543 2 450 54276 exonic -7.36 0 0,1,1 0 0,0,0 113.866666666667 29.1108040386174 0 36.0711111111111 27.919854079151 3.679 21.1466666666667 26.7667293094554 3.757 0 0 cat,chimp,cow,dog,elephant,horse,human,macaque,marmoset,orangutan,panda,pig,rabbit, antisense antisense A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000249790.2 ENST00000422780.3 chr12:8940853-8947093 2 721 5517 intergenic -1.19 0 0,0,0 0 0,0,0 0 0 0 0 0 0 0 0 0 0 0 NA lincRNA processed_transcript A549@0.072671,AG04450@0.0249845,BJ@0.0840685,GM12878@0.0374645,H1HESC@170.647,HELAS3@0.563654,HEPG2@1.45184,HMEC@0.045429,HSMM@0.296363,HUVEC@2.02431,K562@0.23736,MCF7@0.051412,NHEK@3.27469,NHLF@0.240442,SKNSHRA@0.037652, 0 0 0 0 ENSG00000249790.2 ENST00000540299.1 chr12:8940870-8946932 3 806 5252 intergenic -6.78 0 0,0,0 0 0,0,0 0 0 0 0 0 0 0 0 0 0 0 NA lincRNA processed_transcript A549@0.072671,AG04450@0.0249845,BJ@0.0840685,GM12878@0.0374645,H1HESC@170.647,HELAS3@0.563654,HEPG2@1.45184,HMEC@0.045429,HSMM@0.296363,HUVEC@2.02431,K562@0.23736,MCF7@0.051412,NHEK@3.27469,NHLF@0.240442,SKNSHRA@0.037652, 9 6 0 0 ENSG00000249790.2 ENST00000514568.2 chr12:8940870-8948385 2 1970 5543 intergenic 4.49 1 0,0,0 0 0,0,0 0 0 0 0 0 0 0 0 0 0 0 NA lincRNA processed_transcript A549@0.072671,AG04450@0.0249845,BJ@0.0840685,GM12878@0.0374645,H1HESC@170.647,HELAS3@0.563654,HEPG2@1.45184,HMEC@0.045429,HSMM@0.296363,HUVEC@2.02431,K562@0.23736,MCF7@0.051412,NHEK@3.27469,NHLF@0.240442,SKNSHRA@0.037652, 0 0 0 0 ENSG00000256904.1 ENST00000394240.3 chr12:8972412-8973309 2 384 511 intergenic -4.17 0 0,1,0 0 0,0,0 0 0 0 0 0 0 0 0 0 1 1 chimp,human,macaque,marmoset,orangutan, antisense antisense A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000257105.1 ENST00000545706.1 chr12:9139771-9149162 3 493 8894 intronic -4.72 0 0,0,0 0 0,0,0 0 7.45019114009444 0 0 8.55700472228469 12.63 0 10.0232741173825 18.14 1 1 chimp,human,macaque,marmoset,orangutan, antisense antisense A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000214851.3 ENST00000538094.1 chr12:9208182-9217666 3 2210 7270 intergenic 26.54 1 0,1,0 0 0,1,0 0 0 0 3.8 0.50687757909216 0 5.9185520361991 35.5895460797799 0 0 0 human, lincRNA processed_transcript A549@0.004772,AG04450@0,BJ@0.0023655,GM12878@0,H1HESC@0.0330705,HELAS3@0.142729,HEPG2@0.0906805,HMEC@0.001984,HSMM@0.0011045,HUVEC@0.0276475,K562@0,MCF7@0.016623,NHEK@0.000639667,NHLF@0.0032965,SKNSHRA@0.0024465, 0 0 0 0 ENSG00000214851.3 ENST00000399104.3 chr12:9210134-9217672 3 2061 5473 intergenic 26.54 0 0,1,0 0 0,1,0 0 0 0 5.01504124211548 0 0 7.33624454148472 45.8088799561484 0 0 1 chimp,human,orangutan, lincRNA processed_transcript A549@0.004772,AG04450@0,BJ@0.0023655,GM12878@0,H1HESC@0.0330705,HELAS3@0.142729,HEPG2@0.0906805,HMEC@0.001984,HSMM@0.0011045,HUVEC@0.0276475,K562@0,MCF7@0.016623,NHEK@0.000639667,NHLF@0.0032965,SKNSHRA@0.0024465, 0 0 0 0 ENSG00000245105.1 ENST00000499762.1 chr12:9217773-9220651 3 2184 690 exonic 6.02 0 0,1,0 0 0,0,0 0 0 0 3.36721611721612 0 0 4.24496336996337 0 0 1 1 chimp,human,macaque,marmoset,orangutan, lincRNA processed_transcript A549@0.502173,AG04450@0.0185785,BJ@0.298091,GM12878@0.234391,H1HESC@1.08655,HELAS3@1.50081,HEPG2@0.540965,HMEC@0.422734,HSMM@0.363333,HUVEC@0.81495,K562@0.0285025,MCF7@0.457462,NHEK@0.0711137,NHLF@0.481503,SKNSHRA@0.432982, 0 0 0 0 ENSG00000256359.1 ENST00000543404.1 chr12:9381129-9386803 9 1192 4466 intergenic 7.28 0 0,0,0 0 0,0,0 83.2860738255034 2.01074787281684 46.621 155.950503355705 4.8179579041648 63.475 208.956375838926 6.65450067174205 84.815 0 0 cat,chimp,cow,dog,elephant,horse,human,macaque,marmoset,mouse,orangutan,pig,rabbit, lincRNA lincRNA A549@0,AG04450@0,BJ@0.0163995,GM12878@0,H1HESC@0,HELAS3@0.660218,HEPG2@0.0222525,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0.163859,NHEK@0.00425167,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000237248.3 ENST00000427111.3 chr12:9392599-9395635 2 2457 577 intergenic 2.67 0 0,1,1 0 0,0,0 18.2547822547823 21.5857885615251 349.332 97.1102971102971 71.8821490467938 409.792 139.127798127798 107.133448873484 425.685 0 1 chimp,human,macaque,orangutan, lincRNA processed_transcript A549@0.057237,AG04450@0.010177,BJ@0.010809,GM12878@0.0389325,H1HESC@0.337481,HELAS3@0.80036,HEPG2@0.161044,HMEC@0.123222,HSMM@0.043126,HUVEC@0.334407,K562@0.020268,MCF7@0.0445955,NHEK@0.009593,NHLF@0.119896,SKNSHRA@0.250117, 0 0 0 0 ENSG00000256427.1 ENST00000538219.1 chr12:9399093-9410556 3 221 11238 intergenic 0 0 0,0,0 0 0,0,0 0 0.552589428723972 0 0 4.071187043958 12.288 0 6.23242569852287 12.384 0 0 chimp,dog,horse,human,macaque,marmoset,orangutan, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0.026534,HELAS3@0.302984,HEPG2@0.024355,HMEC@0,HSMM@0.036743,HUVEC@0.0108545,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0.030404, 0 0 0 0 ENSG00000256069.1 ENST00000545343.1 chr12:9400252-9412153 4 536 11359 intergenic -5.87 0 0,0,0 0 0,0,0 6.00746268656716 0.242979135487279 0 71.4794776119403 0.544238049124043 0 93.9179104477612 1.52372568007747 0 0 0 chimp,cow,elephant,guinea_pig,horse,human,macaque,marmoset,mouse,opossum,orangutan,rabbit,rat, lincRNA lincRNA A549@0,AG04450@0,BJ@0.01837,GM12878@0,H1HESC@0.0029425,HELAS3@0.726255,HEPG2@0.046221,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0.234871,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000256069.1 ENST00000544183.1 chr12:9406181-9420709 7 982 13534 intergenic -5.87 0 0,0,0 0 0,0,0 3.27902240325866 0.203930840845279 0 74.928716904277 1.20976799172455 2.89 103.687372708758 2.07839515294813 3 0 0 chimp,cow,dog,elephant,horse,human,macaque,marmoset,mouse,opossum,orangutan,panda,pig,rabbit,rat, lincRNA lincRNA A549@0,AG04450@0,BJ@0.01837,GM12878@0,H1HESC@0.0029425,HELAS3@0.726255,HEPG2@0.046221,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0.234871,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000256442.1 ENST00000546259.1 chr12:9799610-9800605 2 530 463 intergenic -0.96 0 0,1,1 0 0,0,0 0 0 0 0 0 0 0 0 0 0 1 chimp,human,macaque,orangutan, antisense non_coding A549@0.053589,AG04450@0.0261335,BJ@0.0092555,GM12878@0.008812,H1HESC@0.0350945,HELAS3@0.030764,HEPG2@0.053227,HMEC@0,HSMM@0.0077355,HUVEC@0.0050195,K562@0.0705975,MCF7@0.0572865,NHEK@0,NHLF@0.155047,SKNSHRA@0.0346645, 0 0 0 0 ENSG00000256302.1 ENST00000545363.1 chr12:9800643-9801422 2 546 231 intergenic -1.15 0 0,0,1 0 0,0,0 0 0 0 0 0 0 0 0 0 1 1 chimp,human,macaque,marmoset,orangutan, antisense non_coding A549@0.0123085,AG04450@0,BJ@0,GM12878@0,H1HESC@0.010846,HELAS3@0,HEPG2@0,HMEC@0.118982,HSMM@0.0139025,HUVEC@0,K562@0.0048855,MCF7@0.050168,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000257027.1 ENST00000537616.1 chr12:9811163-9814681 2 2506 1010 intronic 0.74 0 0,0,1 0 0,0,0 0 0 0 0 0 0 0 0 0 0 1 chimp,human,macaque,orangutan, sense_intronic non_coding A549@1.17965,AG04450@0.617473,BJ@1.25275,GM12878@0.103904,H1HESC@2.37016,HELAS3@2.15508,HEPG2@1.96329,HMEC@0.307708,HSMM@0.416519,HUVEC@0.673153,K562@1.76536,MCF7@1.09449,NHEK@0.533384,NHLF@0.185883,SKNSHRA@0.743629, 0 0 0 0 ENSG00000256582.1 ENST00000541404.1 chr12:9856673-9861946 2 558 4713 intergenic -4.26 0 0,1,0 0 0,0,0 0 0 0 0 0 0 0 0 0 0 1 chimp,human,orangutan, antisense lincRNA A549@0.0197295,AG04450@0.017274,BJ@0.052619,GM12878@0.02467,H1HESC@0.0999415,HELAS3@0.076503,HEPG2@0.1449,HMEC@0.014624,HSMM@0.014697,HUVEC@0.0249645,K562@0.0248775,MCF7@0.04182,NHEK@0.012753,NHLF@0,SKNSHRA@0.004803, 0 0 0 0 ENSG00000255882.1 ENST00000545258.1 chr12:10019626-10022407 2 717 2062 exonic -4.57 0 0,0,1 0 0,0,0 0 0 0 0 0 5.456 0 0 5.522 0 0 chimp,human,macaque,marmoset,orangutan,panda, antisense non_coding A549@0.0153665,AG04450@0.0089695,BJ@0,GM12878@0.0900065,H1HESC@0,HELAS3@0.03229,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0.0634655,K562@0.0896005,MCF7@0,NHEK@0.0144383,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000225231.1 ENST00000412084.1 chr12:10089178-10096094 5 974 5934 intergenic 2.04 1 0,0,0 0 0,0,0 0 0 0 43.9240246406571 1.94573643410853 0 46.7977412731006 1.99494438827098 0 0 0 chimp,cow,dog,horse,human,macaque,marmoset,orangutan, antisense lincRNA A549@0,AG04450@0,BJ@0.006611,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000231560.1 ENST00000420905.1 chr12:10100736-10105935 3 3953 1242 exonic 2.15 0 0,1,0 0 0,0,0 0 0 0 0 0 0 0 0 0 0 0 chimp,human,macaque, antisense lincRNA A549@0,AG04450@0,BJ@0,GM12878@0.0116015,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0.0006145,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000256803.1 ENST00000544225.1 chr12:10167839-10183205 3 779 14583 exonic -3.91 0 0,1,0 0 0,0,0 73.8947368421053 1.24597133648769 0 99.8189987163029 3.90852362339711 0 96.788189987163 5.15634643077556 0 0 0 chimp,cow,dog,elephant,horse,human,macaque,marmoset,mouse,orangutan,rabbit,rat, antisense antisense A549@0.0070645,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0.0062185,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000255895.1 ENST00000541344.1 chr12:10331631-10342707 2 550 10524 exonic -3.36 0 0,0,1 0 0,0,0 0 4.6539338654504 0 20.6181818181818 16.1994488787533 5.026 16.2690909090909 34.1382554161916 5.535 0 0 cat,chimp,cow,dog,elephant,guinea_pig,horse,human,macaque,marmoset,orangutan,panda,pig,rabbit,rat, antisense antisense A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0.132695,HEPG2@0.024708,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0.007358,SKNSHRA@0, 0 0 0 0 ENSG00000255958.1 ENST00000538416.1 chr12:10366760-10367360 2 327 271 exonic 0 0 0,1,1 0 0,0,0 0 0 0 0 0 0 0 0 0 0 0 chimp,dog,elephant,guinea_pig,horse,human,macaque,marmoset,orangutan, antisense antisense A549@0,AG04450@0,BJ@0.014711,GM12878@0,H1HESC@0,HELAS3@0.021312,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0.0081755, 0 0 0 0 ENSG00000245856.3 ENST00000509307.2 chr12:10370462-10372350 2 660 1226 exonic -7.16 0 0,0,0 0 0,0,0 48.1909090909091 0 70.179 62.2 0 91.964 71.8257575757576 1.98205546492659 88.901 1 1 chimp,human,macaque,marmoset,orangutan, antisense antisense A549@0.0436255,AG04450@0.0138865,BJ@0.007438,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0.021118,K562@0,MCF7@0,NHEK@0.013931,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000256288.1 ENST00000539009.1 chr12:10485460-10490891 3 646 4781 intergenic 3.87 0 0,0,0 0 0,0,0 0 0 0 0 0 0 0 0 0 0 0 human, lincRNA lincRNA A549@0.0203685,AG04450@0,BJ@0,GM12878@0,H1HESC@0.979568,HELAS3@0.136322,HEPG2@0.082359,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 107 2 0 0 ENSG00000256155.1 ENST00000535911.1 chr12:10511063-10513644 2 560 2019 intergenic 4.32 0 0,1,0 0 0,0,0 0 0 0 0 0 0 0 0 0 1 1 chimp,human,macaque,marmoset,orangutan, lincRNA lincRNA A549@0,AG04450@0.0220105,BJ@0.0230325,GM12878@0,H1HESC@0.0926975,HELAS3@0.448876,HEPG2@0.257602,HMEC@0,HSMM@0,HUVEC@0.008653,K562@0.00485,MCF7@0.017968,NHEK@0.105715,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000245648.1 ENST00000500682.1 chr12:10516368-10551105 4 2826 31905 exonic 4.62 0 0,1,0 0 0,0,0 0 0.434477354646607 0 1.69851380042463 2.73546466071149 0 1.58740268931352 2.87713524525936 0 0 0 chimp,dog,horse,human,macaque,marmoset,orangutan,panda, lincRNA lincRNA A549@0.067402,AG04450@0.133605,BJ@0.0431465,GM12878@0.770719,H1HESC@0.138435,HELAS3@4.3152,HEPG2@0.484264,HMEC@0.832901,HSMM@0.111601,HUVEC@2.59587,K562@0.655649,MCF7@0.123381,NHEK@1.62752,NHLF@0.010311,SKNSHRA@0.0168415, 0 0 0 0 ENSG00000256039.1 ENST00000544591.1 chr12:10705962-10710648 2 866 3818 intergenic -3.89 0 0,1,1 0 0,0,0 0 0 0 0 0 0 0 0 0 0 0 chimp,cow,elephant,horse,human,macaque,marmoset,orangutan, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0.38915,H1HESC@0,HELAS3@0.0317745,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000256888.1 ENST00000541949.1 chr12:10902833-10929987 7 689 26453 intergenic -3.09 0 0,1,0 0 0,0,0 0 0 0 5.46879535558781 1.97092957320531 4.016 11.1698113207547 8.78093221940801 4.128 0 0 chimp,elephant,guinea_pig,horse,human,macaque,marmoset,orangutan,pig, processed_transcript processed_transcript A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000256888.1 ENST00000544815.1 chr12:10921992-10930043 3 211 7836 intergenic 2.66 0 0,0,0 0 0,0,0 0 0 0 0 3.33907605921388 0 18.4454976303318 25.5523226135784 2.008 0 0 chimp,elephant,horse,human,macaque,marmoset,orangutan, processed_transcript lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000256888.1 ENST00000540188.1 chr12:10922020-10930038 4 467 7545 intergenic 1.19 0 0,0,0 0 0,0,0 0 0 0 0 3.46785950960901 0 14.8822269807281 26.5378396288933 5.622 0 0 cat,chimp,elephant,horse,human,macaque,marmoset,orangutan,rabbit, processed_transcript lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000256419.1 ENST00000544947.1 chr12:11047767-11049551 2 295 1487 intergenic 0 0 0,0,1 0 0,0,0 0 0 0 0 0 0 0 0 0 0 0 cat,chimp,cow,dog,elephant,guinea_pig,horse,human,macaque,marmoset,mouse,opossum,orangutan,panda,pig,rabbit, processed_transcript non_coding A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0.015132,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000256712.1 ENST00000543969.1 chr12:11318689-11323952 2 383 4878 intergenic -4.06 0 0,1,1 0 0,0,0 0 2.52562525625256 74.82 0 2.80094300943009 75.456 0 5.02521525215252 77.665 1 1 chimp,human,macaque,marmoset,orangutan, sense_intronic sense_intronic A549@1.61586,AG04450@1.0983,BJ@0.707074,GM12878@2.42656,H1HESC@1.4976,HELAS3@0.613046,HEPG2@1.21516,HMEC@0,HSMM@0,HUVEC@1.0947,K562@1.15573,MCF7@0.598823,NHEK@0.418374,NHLF@0,SKNSHRA@1.73991, 0 0 0 0 ENSG00000256373.1 ENST00000539328.1 chr12:11365126-11404303 2 504 38671 intergenic -12.03 0 0,0,0 0 0,0,0 0 0 0 0 0 0 0 8.12221044193323 0 0 0 NA antisense lincRNA A549@0.005459,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0.0079465,NHEK@0,NHLF@0,SKNSHRA@0.0106315, 0 0 0 0 ENSG00000255790.1 ENST00000538349.1 chr12:11552315-11639612 5 545 86744 intergenic 2.26 0 0,0,0 0 0,0,0 0 0 0 0 0.286728765101909 5.374 0 1.5842133173476 5.416 0 1 chimp,human,macaque,orangutan, sense_intronic non_coding A549@0,AG04450@0.008332,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0.0011115,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000255790.1 ENST00000542062.1 chr12:11554419-11639608 6 556 84623 intergenic 2.81 0 0,0,0 0 0,0,0 0 0 0 0 0.293915365798896 5.374 0 1.62392021081739 5.416 0 1 chimp,human,macaque,orangutan, sense_intronic non_coding A549@0,AG04450@0.008332,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0.0011115,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000255790.1 ENST00000539178.1 chr12:11583144-11589254 4 383 5721 intergenic 6.28 0 0,0,0 0 0,0,0 0 0 0 0 0.260094389092816 0 0 0.297850026219192 5.02 0 0 cat,chimp,cow,dog,horse,human,macaque,marmoset,orangutan,panda,pig,rabbit, sense_intronic non_coding A549@0,AG04450@0.008332,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0.0011115,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000255790.1 ENST00000540635.1 chr12:11583296-11639566 5 518 55744 intergenic -6.69 0 0,0,0 0 0,0,0 0 0 0 0 0.313253444316877 5.374 0 2.06314580941447 5.416 0 0 chimp,horse,human,macaque,marmoset,orangutan,panda,pig, sense_intronic non_coding A549@0,AG04450@0.008332,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0.0011115,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000256237.1 ENST00000536492.1 chr12:11694329-11708772 2 186 14255 intergenic 1.05 0 1,1,1 0 0,0,0 0 1.04251139950894 8.7 0 1.62336022448264 7.514 0 2.21374956155735 11.001 0 1 human,macaque,orangutan, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0.185525,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000247157.2 ENST00000499291.2 chr12:11700964-11717337 8 3665 12694 intergenic 4.46 1 0,1,1 0 0,0,0 6.23765347885402 0.693240901213172 0 5.36289222373806 2.97754844808571 0 8.07639836289222 4.06507011186387 0 0 1 chimp,human,macaque,orangutan, lincRNA lincRNA A549@0.086658,AG04450@0.065517,BJ@0.081643,GM12878@3.19483,H1HESC@0.0840815,HELAS3@0.001867,HEPG2@0.0081945,HMEC@0.02787,HSMM@0.01724,HUVEC@0.335038,K562@0.00744,MCF7@0.353407,NHEK@0.0165657,NHLF@0.0922715,SKNSHRA@0.712403, 0 0 0 0 ENSG00000247157.2 ENST00000545239.1 chr12:11708634-11709986 2 500 850 intergenic 0 0 0,0,1 0 0,0,0 0 19.7647058823529 11.121 0 8.84 2.629 1.458 18.66 2.761 0 0 chimp,elephant,horse,human,macaque,marmoset,orangutan,pig,rabbit, lincRNA processed_transcript A549@0.086658,AG04450@0.065517,BJ@0.081643,GM12878@3.19483,H1HESC@0.0840815,HELAS3@0.001867,HEPG2@0.0081945,HMEC@0.02787,HSMM@0.01724,HUVEC@0.335038,K562@0.00744,MCF7@0.353407,NHEK@0.0165657,NHLF@0.0922715,SKNSHRA@0.712403, 0 0 0 0 ENSG00000247157.2 ENST00000541162.1 chr12:11709900-11743303 3 460 32939 intergenic 4.46 0 0,1,0 0 0,0,0 0 4.46971674914235 16.8 6.28913043478261 7.51176417013267 7.514 4.22608695652174 9.8210631773885 16.833 0 0 chimp,elephant,human,macaque,marmoset,orangutan, lincRNA lincRNA A549@0.086658,AG04450@0.065517,BJ@0.081643,GM12878@3.19483,H1HESC@0.0840815,HELAS3@0.001867,HEPG2@0.0081945,HMEC@0.02787,HSMM@0.01724,HUVEC@0.335038,K562@0.00744,MCF7@0.353407,NHEK@0.0165657,NHLF@0.0922715,SKNSHRA@0.712403, 0 0 0 0 ENSG00000255670.1 ENST00000544086.1 chr12:12638287-12644515 2 410 5816 intronic -2.53 1 0,0,0 0 0,0,0 0 11.5710110041265 0 0 12.8959766162311 0 0 17.5495185694635 0 0 0 chimp,guinea_pig,human,macaque,marmoset,orangutan, antisense lincRNA A549@0.083809,AG04450@0.0530045,BJ@0.0117475,GM12878@0.047221,H1HESC@0.0290595,HELAS3@0.0580775,HEPG2@0.031466,HMEC@0,HSMM@0.170878,HUVEC@0.035375,K562@0.030884,MCF7@0.01475,NHEK@0.0141227,NHLF@0.0141025,SKNSHRA@0.117567, 0 0 0 0 ENSG00000257004.1 ENST00000539988.1 chr12:12821916-12838009 2 239 15852 intronic -11.61 1 0,0,0 0 0,0,0 19.3305439330544 19.3591344940701 0 34.9790794979079 24.6775170325511 11.092 35.0585774058577 24.5614433509967 11.604 0 0 cat,chimp,dog,guinea_pig,horse,human,macaque,marmoset,orangutan,panda,rabbit, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0.18264,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0.0085315,NHEK@0,NHLF@0,SKNSHRA@0.077889, 0 0 0 0 ENSG00000256658.1 ENST00000542291.1 chr12:12876231-12876945 2 148 564 intergenic 0 0 0,1,1 0 0,0,0 0 0 0 0 79.0390070921986 80.006 0 102.370567375887 63.909 0 0 cat,chimp,cow,elephant,human,macaque,marmoset,orangutan,panda, antisense antisense A549@0.014471,AG04450@0,BJ@0,GM12878@0.013439,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0.013707,NHEK@0,NHLF@0,SKNSHRA@0.0302775, 0 0 0 0 ENSG00000247498.2 ENST00000545914.1 chr12:13080660-13133241 4 562 52013 intronic 3.35 0 1,1,1 0 0,0,0 0 11.481841078192 0 0 15.2762194066868 1.195 8.2153024911032 15.0469498010113 1.215 0 0 chimp,cow,dog,elephant,human,macaque,marmoset,orangutan, antisense antisense A549@2.32539,AG04450@1.71518,BJ@0.479425,GM12878@0,H1HESC@0,HELAS3@0.459428,HEPG2@2.96692,HMEC@5.03053,HSMM@0.037946,HUVEC@3.2992,K562@3.95543,MCF7@2.20203,NHEK@1.08284,NHLF@0.457012,SKNSHRA@1.63639, 0 0 0 0 ENSG00000256893.1 ENST00000540198.1 chr12:13080661-13105684 4 400 24617 intronic -9.56 0 0,1,0 0 0,0,0 0 18.4318966567819 0 15.1225 21.8287362391843 1.195 16.33 21.075476296868 1.215 0 0 chimp,dog,horse,human,macaque,marmoset, antisense antisense A549@0.24795,AG04450@0.0549455,BJ@0.00333,GM12878@0,H1HESC@0,HELAS3@0.121578,HEPG2@0.126068,HMEC@0.043678,HSMM@0,HUVEC@0.0519445,K562@0.098179,MCF7@0.028691,NHEK@0.0184103,NHLF@0.003591,SKNSHRA@0.0605165, 0 0 0 0 ENSG00000247498.2 ENST00000543515.1 chr12:13080692-13133309 3 518 52095 intronic 3.35 0 0,1,0 0 0,0,0 0 11.463768115942 0 0 15.2521739130435 1.195 3.28378378378378 15.0792398502735 1.215 0 0 cat,chimp,dog,horse,human,macaque,marmoset,orangutan,pig, antisense antisense A549@2.32539,AG04450@1.71518,BJ@0.479425,GM12878@0,H1HESC@0,HELAS3@0.459428,HEPG2@2.96692,HMEC@5.03053,HSMM@0.037946,HUVEC@3.2992,K562@3.95543,MCF7@2.20203,NHEK@1.08284,NHLF@0.457012,SKNSHRA@1.63639, 0 0 0 0 ENSG00000247498.2 ENST00000542078.1 chr12:13080696-13136747 3 375 55672 exonic -1.46 0 0,1,0 0 0,0,0 0 10.7272057766921 0 18.3306666666667 14.4397901997413 1.195 19.3253333333333 14.3096350050295 1.215 0 0 chimp,elephant,guinea_pig,human,macaque,marmoset,orangutan, antisense antisense A549@2.32539,AG04450@1.71518,BJ@0.479425,GM12878@0,H1HESC@0,HELAS3@0.459428,HEPG2@2.96692,HMEC@5.03053,HSMM@0.037946,HUVEC@3.2992,K562@3.95543,MCF7@2.20203,NHEK@1.08284,NHLF@0.457012,SKNSHRA@1.63639, 0 0 0 0 ENSG00000247498.2 ENST00000536029.1 chr12:13080698-13133028 4 462 51862 intronic 0 0 0,1,0 0 0,0,0 0 11.5152712969033 0 0 15.3206972349697 1.195 3.68181818181818 15.1469862326945 1.215 1 1 chimp,human,macaque,marmoset,orangutan, antisense antisense A549@2.32539,AG04450@1.71518,BJ@0.479425,GM12878@0,H1HESC@0,HELAS3@0.459428,HEPG2@2.96692,HMEC@5.03053,HSMM@0.037946,HUVEC@3.2992,K562@3.95543,MCF7@2.20203,NHEK@1.08284,NHLF@0.457012,SKNSHRA@1.63639, 0 0 0 0 ENSG00000256893.1 ENST00000394742.3 chr12:13100085-13106891 3 397 6405 intronic -27.15 1 0,0,0 0 0,0,0 0 50.9270882123341 0 0 62.767681498829 6.049 0 57.3850117096019 6.532 0 0 cat,chimp,elephant,horse,human,macaque,marmoset,orangutan,panda,rabbit, antisense antisense A549@0.24795,AG04450@0.0549455,BJ@0.00333,GM12878@0,H1HESC@0,HELAS3@0.121578,HEPG2@0.126068,HMEC@0.043678,HSMM@0,HUVEC@0.0519445,K562@0.098179,MCF7@0.028691,NHEK@0.0184103,NHLF@0.003591,SKNSHRA@0.0605165, 0 0 0 0 ENSG00000256893.1 ENST00000538231.1 chr12:13100099-13101511 2 455 955 intronic -4.97 0 0,0,0 0 0,0,0 62.1714285714286 0 0 77.978021978022 2.31204188481675 6.049 84.2 3.65130890052356 6.532 0 0 cat,chimp,cow,dog,elephant,guinea_pig,horse,human,macaque,marmoset,mouse,orangutan,panda,rabbit,rat, antisense antisense A549@0.24795,AG04450@0.0549455,BJ@0.00333,GM12878@0,H1HESC@0,HELAS3@0.121578,HEPG2@0.126068,HMEC@0.043678,HSMM@0,HUVEC@0.0519445,K562@0.098179,MCF7@0.028691,NHEK@0.0184103,NHLF@0.003591,SKNSHRA@0.0605165, 0 0 0 0 ENSG00000256011.1 ENST00000545158.1 chr12:13115234-13116473 2 367 870 intergenic 0 0 0,0,0 0 0,0,0 0 0 0 0 0 8.1 0 0 12.072 0 0 cat,chimp,elephant,human,macaque,marmoset,orangutan,panda, antisense antisense A549@0,AG04450@0.0032905,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0.0131765,K562@0.0040605,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0.002974, 0 0 0 0 ENSG00000247498.2 ENST00000499948.2 chr12:13132771-13137579 3 1743 3061 exonic 4.90 1 0,0,1 0 0,0,0 0 0 0 6.16064257028112 1.78569095066972 10.319 9.22719449225473 1.76935641947076 17.683 0 0 chimp,elephant,human,macaque,marmoset,orangutan,panda,rabbit, antisense antisense A549@2.32539,AG04450@1.71518,BJ@0.479425,GM12878@0,H1HESC@0,HELAS3@0.459428,HEPG2@2.96692,HMEC@5.03053,HSMM@0.037946,HUVEC@3.2992,K562@3.95543,MCF7@2.20203,NHEK@1.08284,NHLF@0.457012,SKNSHRA@1.63639, 0 0 0 0 ENSG00000255621.1 ENST00000543321.1 chr12:13153385-13193613 5 2398 37822 intergenic 4.29 0 0,1,1 1 0,1,0 0 0.314975411136376 0 3.81693077564637 7.19893183861245 49.24 11.8915763135947 36.8588387710856 71.529 0 0 chimp,horse,human, processed_transcript processed_transcript A549@0.0705315,AG04450@0.0417345,BJ@0.010811,GM12878@0.001678,H1HESC@0.0547035,HELAS3@0.024585,HEPG2@0.016186,HMEC@0.027196,HSMM@0.00429,HUVEC@0.0205925,K562@0.068591,MCF7@0.029467,NHEK@0.0309967,NHLF@0.003604,SKNSHRA@0.0333485, 0 0 0 0 ENSG00000256175.1 ENST00000542311.1 chr12:13172444-13193613 3 2038 19127 intergenic 4.41 0 0,1,1 0 0,0,0 0 0.622836827521305 0 1.76054955839058 4.92941914571025 0 11.247791952895 17.6890782663251 0 0 1 chimp,human,macaque, processed_transcript processed_transcript A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000256306.1 ENST00000535528.1 chr12:13679788-13683809 2 311 3708 intergenic -2.62 0 0,1,1 0 0,0,0 0 0 0 0 0.310140237324703 0 0 0.327669902912621 103.102 0 0 chimp,horse,human,macaque,marmoset,orangutan,panda, antisense antisense A549@0,AG04450@0.010302,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000256306.1 ENST00000543347.1 chr12:13683589-13700516 2 380 16545 intergenic -2.62 0 0,0,0 0 0,0,0 0 30.5442127530976 0 0 34.2727712299788 1.15 0 34.2434572378362 1.215 0 0 chimp,cow,dog,elephant,guinea_pig,horse,human,macaque,marmoset,orangutan, antisense lincRNA A549@0,AG04450@0.010302,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000256084.1 ENST00000538329.1 chr12:14369524-14374231 2 638 4067 intergenic 2.92 0 0,1,0 0 0,0,0 0 0 0 0 0 3.315 0 0 3.367 0 1 chimp,human,macaque,orangutan, lincRNA lincRNA A549@0,AG04450@0,BJ@0.050564,GM12878@0.0062995,H1HESC@0.0129655,HELAS3@0.0368265,HEPG2@0.0553345,HMEC@0,HSMM@0.458572,HUVEC@0,K562@0.022187,MCF7@0.006425,NHEK@0.0267617,NHLF@0.042615,SKNSHRA@0.0532495, 0 0 0 0 ENSG00000255649.1 ENST00000544122.1 chr12:14683085-14686163 3 424 2650 intronic 0.15 0 0,0,0 0 0,0,0 0 0 0 0 3.63094339622642 7.65 0 2.93735849056604 7.53 0 1 chimp,human,macaque,orangutan, antisense antisense A549@0,AG04450@0.0226545,BJ@0,GM12878@0.0219575,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0.00618367,NHLF@0,SKNSHRA@0.0053225, 0 0 0 0 ENSG00000256751.1 ENST00000545424.1 chr12:14720684-14772232 5 470 51070 exonic 4.01 0 0,1,0 0 0,0,0 77.3617021276596 2.79212845114549 0 103.963829787234 4.74437047190131 4.589 109.129787234043 8.08343450166438 4.718 0 0 chimp,cow,horse,human,macaque,marmoset,pig,rabbit, antisense antisense A549@0.0810385,AG04450@0,BJ@0.0089795,GM12878@0,H1HESC@0.0043675,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0.0096135,MCF7@0.0543275,NHEK@0.0169297,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000256751.1 ENST00000542401.1 chr12:14720925-14772689 5 534 51222 exonic 4.01 0 0,1,1 0 0,0,0 77.5280898876404 2.78384288001249 0 104.612359550562 4.49892624263012 16.44 111.964419475655 7.70001171371676 23.129 0 0 cow,horse,human,macaque,orangutan,pig, antisense antisense A549@0.0810385,AG04450@0,BJ@0.0089795,GM12878@0,H1HESC@0.0043675,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0.0096135,MCF7@0.0543275,NHEK@0.0169297,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000214772.2 ENST00000501178.2 chr12:14818589-14910897 5 652 91648 intronic -4.27 0 0,1,0 0 0,0,0 0 1.66308048184358 0 0 5.37541462988827 0 0 6.55472023393854 0 0 1 chimp,human,macaque,orangutan, antisense antisense A549@0,AG04450@0,BJ@0.0147335,GM12878@0.0035675,H1HESC@0.1068,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0.117415,MCF7@0,NHEK@0.003948,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000256339.1 ENST00000444324.2 chr12:14994026-14997642 2 355 3259 exonic 2.37 0 0,1,0 0 0,0,0 37.6450704225352 0 49.848 45.6985915492958 3.94262043571648 120.32 54.8422535211268 5.25836146057073 131.051 0 0 cat,chimp,cow,dog,elephant,guinea_pig,human,macaque,marmoset,mouse,orangutan, antisense antisense A549@0.0159125,AG04450@0,BJ@0,GM12878@0.020061,H1HESC@0,HELAS3@0,HEPG2@0.015701,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000255727.1 ENST00000542689.1 chr12:15154767-15159617 4 601 4243 intergenic 0.20 0 1,1,1 0 0,0,0 0 0 0 0 3.03629507423992 0 0 3.21447089323592 0 0 0 chimp,human,macaque,marmoset,orangutan,rabbit, lincRNA lincRNA A549@0,AG04450@0.011114,BJ@0,GM12878@0,H1HESC@0.0137155,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0.013594,NHEK@0,NHLF@0,SKNSHRA@0.030027, 0 0 0 0 ENSG00000256650.1 ENST00000539734.1 chr12:15265297-15267632 2 299 2034 intronic -4.86 0 0,0,1 0 0,0,0 0 0 0 0 0 0 0 0 0 1 1 chimp,human,macaque,marmoset,orangutan, sense_intronic sense_intronic A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000255660.1 ENST00000541243.1 chr12:15304857-15308217 3 334 3022 intronic 0 1 0,1,0 0 0,0,0 0 29.2213765718068 0 86.2095808383233 29.295168762409 51.894 61.5868263473054 31.1429516876241 58.959 0 0 cat,chimp,cow,dog,elephant,horse,human,macaque,marmoset,orangutan,rabbit,rat, antisense lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0.008094,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000255565.1 ENST00000544015.1 chr12:15933002-15935054 2 463 1587 intronic -1.08 0 0,0,0 0 0,0,0 0 0 0 0 4.20730938878387 4.692 9.44708423326134 5.15942028985507 4.828 1 1 chimp,human,macaque,marmoset,orangutan, lincRNA lincRNA A549@0.038582,AG04450@0,BJ@0.0974305,GM12878@0.006289,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000256953.1 ENST00000545999.1 chr12:15966427-15981208 3 414 14363 intronic 3.28 1 0,0,0 0 0,0,0 16.1642512077295 0.465640882823923 0 0 4.22641509433962 0 0 6.31574183666365 0 0 0 chimp,cow,horse,human,macaque,marmoset,orangutan,pig,rabbit, sense_intronic lincRNA A549@0,AG04450@0.017479,BJ@0.041985,GM12878@0.06246,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0.007207,MCF7@0,NHEK@0,NHLF@0.030339,SKNSHRA@0.006331, 0 0 0 0 ENSG00000256564.1 ENST00000541892.1 chr12:16720345-16726874 2 601 5926 intronic -1.16 0 0,0,0 0 0,0,0 467.545757071547 12.2300033749578 0 474.737104825291 15.860614242322 0 469.141430948419 20.8619642254472 0 0 0 cat,chimp,cow,dog,elephant,guinea_pig,horse,human,macaque,marmoset,mouse,opossum,orangutan,panda,pig,rabbit,rat, antisense antisense A549@0.985219,AG04450@0.375157,BJ@0.036876,GM12878@0.13086,H1HESC@0.272206,HELAS3@0.0983235,HEPG2@0.03539,HMEC@0.046954,HSMM@0,HUVEC@0.06945,K562@0.0122135,MCF7@0.0046275,NHEK@0,NHLF@0.021657,SKNSHRA@0, 0 0 0 0 ENSG00000255871.1 ENST00000418574.2 chr12:16846734-16848911 2 2071 104 intergenic 2.54 0 0,0,1 0 0,0,0 0 0 0 0 0 0 0 0 0 0 1 chimp,human,macaque,orangutan, lincRNA lincRNA A549@0.0334395,AG04450@0.0294515,BJ@0,GM12878@0.0084645,H1HESC@0.002808,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0.007729,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000255740.1 ENST00000539266.1 chr12:16939696-16940775 2 254 823 intergenic 0 0 0,0,0 0 0,0,0 477.070866141732 334.765492102066 218.541 593.220472440945 272.869987849332 285.151 615.826771653543 348.083839611179 273.469 0 0 chimp,cow,dog,elephant,guinea_pig,horse,human,macaque,marmoset,mouse,opossum,orangutan,panda,pig,platypus,rabbit,rat, lincRNA lincRNA A549@0,AG04450@0.012596,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0.008499,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000256994.1 ENST00000540399.1 chr12:17662287-17742926 8 995 79630 intergenic -2.39 0 0,0,0 0 0,0,0 11.0954773869347 12.6764410398091 24.295 0 16.2741931432877 8.387 0 21.9681275901042 8.648 0 0 chimp,dog,human,macaque,marmoset,orangutan,pig,rabbit, lincRNA lincRNA A549@0.0064925,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000256389.1 ENST00000539105.1 chr12:17742191-17768397 2 458 25746 intergenic -1.02 1 0,1,0 0 0,0,0 0 44.8173696884953 0 0 56.4782102074109 0 0 58.7900256350501 0 0 0 chimp,horse,human,macaque,marmoset,orangutan,panda,rabbit, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000255648.1 ENST00000536931.1 chr12:18867729-18890812 3 569 22510 intronic -1.64 0 0,0,1 0 0,0,0 0 6.55859617947579 0 9.32513181019332 10.2916481563749 0 9.25131810193322 11.0514882274545 0 0 0 chimp,cow,dog,horse,human,macaque,marmoset,orangutan,pig, antisense antisense A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0.004294,MCF7@0,NHEK@0.0201617,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000253284.2 ENST00000501211.2 chr12:19300008-19307593 2 5389 2194 intronic -0.37 1 0,0,0 0 0,0,0 7.58823529411765 0 0 4.59083317869735 5.1175934366454 0 7.54574132492113 5.32953509571559 0 0 1 chimp,human,orangutan, sense_intronic sense_intronic A549@0.106197,AG04450@0.394593,BJ@0.177917,GM12878@0,H1HESC@1.15752,HELAS3@0.144091,HEPG2@0.15943,HMEC@0.128234,HSMM@0.001532,HUVEC@0.155514,K562@0.409239,MCF7@0.121503,NHEK@0.368449,NHLF@0.017974,SKNSHRA@0.425113, 0 0 0 0 ENSG00000257006.1 ENST00000541575.1 chr12:19411205-19412877 2 676 994 intronic -8.06 0 0,0,1 0 0,0,0 0 0 51.858 0 0 49.17 2.87573964497041 2.68913480885312 66.521 0 0 chimp,cow,dog,elephant,horse,human,macaque,marmoset,orangutan, sense_intronic sense_intronic A549@0.029401,AG04450@0.063493,BJ@0.0204335,GM12878@0,H1HESC@0.042916,HELAS3@0.023398,HEPG2@0.022383,HMEC@0,HSMM@0,HUVEC@0.0337075,K562@0.0365235,MCF7@0.004602,NHEK@0.0240677,NHLF@0,SKNSHRA@0.113042, 0 0 0 0 ENSG00000255910.1 ENST00000535764.1 chr12:19928385-20162871 5 713 233765 intergenic 0.79 0 0,1,0 0 0,0,0 0 9.70218809488161 0 0 14.0420935554938 0 0 18.8607362094411 0 1 1 chimp,human,macaque,marmoset,orangutan, processed_transcript processed_transcript A549@0.009222,AG04450@0,BJ@0.0347025,GM12878@0.0735365,H1HESC@0.0216665,HELAS3@0.0962185,HEPG2@0.0264175,HMEC@0,HSMM@0,HUVEC@0.0276855,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0.019168, 0 0 0 0 ENSG00000256287.1 ENST00000536666.1 chr12:20167714-20251802 3 428 83656 intergenic -1.52 0 0,0,0 0 0,0,0 0 10.1968298747251 0 0 13.4676652003443 16.523 6.24532710280374 14.5438103662618 23.191 0 0 chimp,dog,elephant,horse,human,macaque,marmoset,orangutan,rat, lincRNA lincRNA A549@0.0100725,AG04450@0,BJ@0,GM12878@0.097925,H1HESC@0,HELAS3@0.106555,HEPG2@0.0759465,HMEC@0,HSMM@0,HUVEC@0.0305235,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0.005264, 0 0 0 0 ENSG00000256499.1 ENST00000543778.1 chr12:20273914-20282747 5 628 8197 intergenic -1.23 0 0,0,1 0 0,0,0 0 5.25765523972185 0 3.2484076433121 10.3437843113334 3.474 3.29936305732484 14.2092228864219 7.028 0 0 chimp,elephant,guinea_pig,horse,human,macaque,marmoset,orangutan, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0.0031845,H1HESC@0,HELAS3@0,HEPG2@0.0129275,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000256879.1 ENST00000535755.1 chr12:20514666-20523196 2 523 8005 exonic 7.39 0 0,1,0 1 0,0,0 562.621414913958 63.0659587757652 27.401 521.420650095602 58.2392254840725 6.962 507.323135755258 53.48519675203 5.376 0 0 cat,chimp,cow,dog,elephant,guinea_pig,horse,human,macaque,marmoset,mouse,opossum,orangutan,panda,pig,rabbit,rat, antisense antisense A549@0.0493775,AG04450@0,BJ@0.050269,GM12878@0,H1HESC@0.059749,HELAS3@0.809167,HEPG2@0.332525,HMEC@0,HSMM@0,HUVEC@0.148387,K562@0,MCF7@0,NHEK@0,NHLF@0.0073505,SKNSHRA@0.0189045, 0 0 0 0 ENSG00000256615.1 ENST00000541860.1 chr12:21815247-21912966 2 576 97141 intronic 1.66 0 0,1,0 0 0,0,0 0 5.37232476503227 0 0 6.82280396536993 0 0 7.61904859945852 0 0 1 chimp,human,orangutan, antisense antisense A549@2.01304,AG04450@0,BJ@0,GM12878@0,H1HESC@0.0154245,HELAS3@0.0540035,HEPG2@0.0187635,HMEC@0,HSMM@0.003944,HUVEC@0,K562@0.0114505,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000255644.1 ENST00000542489.1 chr12:21912914-21919639 2 454 6269 exonic 6.87 0 0,0,1 0 0,0,0 390.132158590308 83.2421438825969 0 225.409691629956 60.4980060615728 0 294.066079295154 70.5691497846546 0 0 0 cat,chimp,cow,dog,elephant,guinea_pig,horse,human,macaque,marmoset,mouse,opossum,orangutan,panda,pig,platypus,rabbit,rat, antisense antisense A549@0.673547,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0.0061255,HMEC@0,HSMM@0,HUVEC@0,K562@0.0195765,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000257022.1 ENST00000539874.1 chr12:21980144-22040891 4 518 60223 exonic -1.20 0 0,1,1 0 0,0,0 120.766409266409 24.5515666771831 10.574 94.2722007722008 28.0615379506169 11.362 104.92277992278 28.7124022383475 12.278 0 0 chimp,guinea_pig,human,macaque,mouse,orangutan,rabbit,rat, antisense antisense A549@0.16191,AG04450@0.0045115,BJ@0,GM12878@0,H1HESC@0.0170795,HELAS3@0.0159925,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0.0052215,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0.004354, 0 0 0 0 ENSG00000256714.1 ENST00000536786.1 chr12:22548022-22551009 2 387 2598 intergenic -2.70 0 0,1,1 0 0,0,0 0 8.08622016936105 0 0 4.04157043879908 0 0 4.09545804464973 0 0 0 chimp,guinea_pig,human,macaque,orangutan, sense_intronic lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000256973.1 ENST00000543604.1 chr12:22613453-22616848 2 736 2657 intronic -9.63 0 0,0,0 0 0,0,0 8.75 0 3.91 0 0 0 0 0 0.972 0 0 chimp,human,macaque,orangutan,pig, sense_intronic lincRNA A549@0.187043,AG04450@0.315149,BJ@0.17466,GM12878@0.51941,H1HESC@0.184464,HELAS3@0.168513,HEPG2@0.125098,HMEC@0.007191,HSMM@0.045904,HUVEC@0.191968,K562@0.239984,MCF7@0.128957,NHEK@0.0957033,NHLF@0.125813,SKNSHRA@0.208885, 0 0 0 0 ENSG00000250166.2 ENST00000508615.2 chr12:22754359-22771801 2 427 17013 intergenic 2.14 0 0,0,0 0 0,0,0 0 0 0 0 2.39023099982366 0 123.021077283372 79.8642214776935 7.992 1 1 chimp,human,macaque,marmoset,orangutan, lincRNA lincRNA A549@0.0193155,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0.0054125,MCF7@0,NHEK@0.00595133,NHLF@0,SKNSHRA@0.0105955, 0 0 0 0 ENSG00000257023.1 ENST00000542076.1 chr12:22762162-22777949 2 860 14925 intergenic 0.72 0 0,1,0 0 0,0,0 0 0 206.935 11.8127906976744 2.73467336683417 273.181 12.5790697674419 95.3219430485762 242.598 0 0 chimp,horse,human,orangutan,panda, antisense antisense A549@0.323179,AG04450@0.0330665,BJ@0.0084705,GM12878@0.0965565,H1HESC@0.115384,HELAS3@0.121748,HEPG2@0.029629,HMEC@0.128364,HSMM@0.002387,HUVEC@0.0188195,K562@0.036357,MCF7@0.0046645,NHEK@0.077035,NHLF@0.0067405,SKNSHRA@0.0465675, 0 0 0 0 ENSG00000256995.1 ENST00000413794.2 chr12:22852793-23040977 4 561 187617 intergenic 1.08 0 0,0,0 0 0,0,0 128.181818181818 29.213338876541 0 121.837789661319 31.6809031164553 0 115.096256684492 34.327955355858 0 0 0 chimp,dog,horse,human,macaque,mouse,orangutan,panda,pig,rabbit, processed_transcript lincRNA A549@0.007369,AG04450@0.002325,BJ@0,GM12878@0.0445075,H1HESC@0.657983,HELAS3@0,HEPG2@0.005619,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0.0137255,NHEK@0.00566533,NHLF@0.003304,SKNSHRA@0.002184, 0 0 0 0 ENSG00000256995.1 ENST00000536744.1 chr12:22852875-23041867 5 642 188342 intergenic -0.45 0 0,0,0 0 0,0,0 112.009345794393 29.1008856229625 0 106.465732087227 31.5589512694991 0 100.57476635514 34.1958139979399 0 0 0 chimp,cow,elephant,horse,human,macaque,mouse,orangutan,panda,pig,rabbit,rat, processed_transcript lincRNA A549@0.007369,AG04450@0.002325,BJ@0,GM12878@0.0445075,H1HESC@0.657983,HELAS3@0,HEPG2@0.005619,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0.0137255,NHEK@0.00566533,NHLF@0.003304,SKNSHRA@0.002184, 0 0 0 0 ENSG00000256923.1 ENST00000537293.1 chr12:22895516-22896025 2 422 85 intergenic -0.05 0 0,0,0 0 0,0,0 0 0 0 0 0 2.151 0 0 2.259 0 0 chimp,dog,horse,human,macaque,orangutan,panda, lincRNA lincRNA A549@0.0159085,AG04450@0.000581,BJ@0,GM12878@0,H1HESC@0.276089,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0.0242225,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000256995.1 ENST00000538317.1 chr12:23012409-23123942 5 579 110946 intergenic -2.50 0 0,0,0 0 0,0,0 124.19689119171 28.2009265768933 0 118.050086355786 23.3533340544048 0 111.518134715026 27.0511870639771 0 0 0 chimp,dog,elephant,horse,human,macaque,mouse,orangutan,panda,pig,rabbit,rat, processed_transcript lincRNA A549@0.007369,AG04450@0.002325,BJ@0,GM12878@0.0445075,H1HESC@0.657983,HELAS3@0,HEPG2@0.005619,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0.0137255,NHEK@0.00566533,NHLF@0.003304,SKNSHRA@0.002184, 0 0 0 0 ENSG00000256995.1 ENST00000540895.1 chr12:23117506-23327057 9 1911 207624 intergenic 3.84 0 0,0,0 0 0,0,0 13.1470434327577 51.608484568258 187.59 18.4353741496599 42.6782260239664 62.654 23.2328623757195 42.517170461989 60.627 0 0 chimp,dog,elephant,human,macaque, processed_transcript lincRNA A549@0.007369,AG04450@0.002325,BJ@0,GM12878@0.0445075,H1HESC@0.657983,HELAS3@0,HEPG2@0.005619,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0.0137255,NHEK@0.00566533,NHLF@0.003304,SKNSHRA@0.002184, 0 0 0 0 ENSG00000256995.1 ENST00000540994.1 chr12:23174721-23207175 4 481 31967 intergenic 3.84 0 0,0,0 0 0,0,0 52.2328482328482 54.5319861106766 0 66.6819126819127 48.6993149185097 0 85.5176715176715 47.7667594707042 0 0 0 chimp,cow,dog,elephant,horse,human,macaque,opossum,orangutan,panda, processed_transcript lincRNA A549@0.007369,AG04450@0.002325,BJ@0,GM12878@0.0445075,H1HESC@0.657983,HELAS3@0,HEPG2@0.005619,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0.0137255,NHEK@0.00566533,NHLF@0.003304,SKNSHRA@0.002184, 0 0 0 0 ENSG00000256321.1 ENST00000541288.1 chr12:23252302-23341472 3 638 88528 intergenic -4.84 0 0,0,0 0 0,0,0 0 30.2239065606362 476.22 0 28.3710803361648 420.865 0 28.8517418217965 391.183 0 0 chimp,dog,horse,human,macaque,orangutan,panda, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0.006278,H1HESC@0.226733,HELAS3@0,HEPG2@0,HMEC@0.002514,HSMM@0.0116735,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0.005488, 0 0 0 0 ENSG00000256321.1 ENST00000534841.1 chr12:23328576-23341453 3 678 12195 intergenic -1.48 0 0,0,0 0 0,0,0 0 52.9878638786388 0 0 39.319475194752 0 0 39.1156211562116 0 0 0 chimp,dog,human,macaque,orangutan,panda, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0.006278,H1HESC@0.226733,HELAS3@0,HEPG2@0,HMEC@0.002514,HSMM@0.0116735,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0.005488, 0 0 0 0 ENSG00000256321.1 ENST00000545400.1 chr12:23328582-23344521 5 1624 14307 intergenic 0.33 0 0,0,0 0 0,0,0 41.7339901477833 84.98609072482 0 45.8793103448276 81.565806947648 0 45.5886699507389 80.912140910044 0 0 0 chimp,dog,elephant,horse,human,macaque,orangutan,panda, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0.006278,H1HESC@0.226733,HELAS3@0,HEPG2@0,HMEC@0.002514,HSMM@0.0116735,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0.005488, 0 0 0 0 ENSG00000115934.11 ENST00000538297.1 chr12:23334268-23404433 2 1327 68836 intergenic 7.31 0 0,0,0 0 0,0,0 0 52.0656487884247 0 0 49.1978325294904 0 0 48.1407403103027 0 0 0 chimp,cow,dog,elephant,horse,human,macaque,orangutan,panda,pig, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0.00821,HMEC@0,HSMM@0,HUVEC@0.0018295,K562@2.11967,MCF7@0.0491275,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000256473.1 ENST00000546118.1 chr12:23790907-23791421 2 399 113 intronic -6.84 0 0,0,1 0 0,0,0 0 0 0 0 0 0 8.80701754385965 0 0 0 1 chimp,human,macaque,orangutan, antisense antisense A549@0,AG04450@0,BJ@0,GM12878@0.0233815,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0.079723,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000255864.1 ENST00000540811.1 chr12:24366190-24715524 5 671 348655 intergenic 0 0 0,1,0 1 0,0,1 343.301043219076 57.3406433293657 375.091 270.235469448584 49.2048959573217 179.967 296.590163934426 49.3542355623755 162.371 0 0 cat,chimp,cow,dog,elephant,guinea_pig,horse,human,macaque,mouse,opossum,orangutan,panda,pig,rabbit, lincRNA lincRNA A549@0,AG04450@1.7282,BJ@0.048896,GM12878@0,H1HESC@0.242432,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0.01399,HUVEC@0.100241,K562@0,MCF7@0.042688,NHEK@0.004713,NHLF@0.96543,SKNSHRA@0.326519, 0 0 0 0 ENSG00000255864.1 ENST00000446891.2 chr12:24366276-24715421 4 405 348734 intergenic 0 0 0,1,0 1 0,0,1 402.8 57.3198655708936 445.028 292.881481481481 49.2046975631856 237.925 331.214814814815 49.3542097988725 221.243 0 0 cat,chimp,cow,dog,elephant,guinea_pig,horse,human,macaque,opossum,orangutan,panda,pig,rabbit, lincRNA lincRNA A549@0,AG04450@1.7282,BJ@0.048896,GM12878@0,H1HESC@0.242432,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0.01399,HUVEC@0.100241,K562@0,MCF7@0.042688,NHEK@0.004713,NHLF@0.96543,SKNSHRA@0.326519, 0 0 0 0 ENSG00000255864.1 ENST00000536729.1 chr12:24366277-24510364 3 262 143821 intergenic -3.73 0 0,0,0 0 0,0,1 136.30534351145 50.1431779781812 0 70.412213740458 44.3061583496152 0 124.629770992366 45.5988694279695 0 0 0 cat,chimp,cow,dog,elephant,guinea_pig,horse,human,macaque,orangutan,pig,rabbit, lincRNA lincRNA A549@0,AG04450@1.7282,BJ@0.048896,GM12878@0,H1HESC@0.242432,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0.01399,HUVEC@0.100241,K562@0,MCF7@0.042688,NHEK@0.004713,NHLF@0.96543,SKNSHRA@0.326519, 0 0 0 0 ENSG00000256120.1 ENST00000540733.1 chr12:24376205-24380442 2 399 3836 intergenic 3.46 0 0,0,0 0 0,0,0 0 102.361835245047 0 0 78.2262773722628 19.701 0 79.9627215849844 21.043 0 0 cat,chimp,cow,dog,guinea_pig,horse,human,macaque,mouse,orangutan,panda,pig, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000256120.1 ENST00000539583.1 chr12:24376221-24390899 5 568 14102 intergenic 3.46 0 0,0,1 0 0,0,0 31.056338028169 117.290384342646 0 18.6285211267606 93.5351723159836 19.701 16.3943661971831 94.3092469153312 21.043 0 0 cat,chimp,elephant,horse,human,macaque,orangutan, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000255864.1 ENST00000429944.2 chr12:24430184-24715427 5 554 284681 intergenic -3.18 0 0,1,0 1 0,0,1 327.092057761733 54.4087311762991 440.954 219.353790613718 47.9015740425248 234.619 218.705776173285 48.0492972836263 217.877 0 0 cat,chimp,cow,dog,elephant,guinea_pig,horse,human,macaque,orangutan,panda,rabbit, lincRNA lincRNA A549@0,AG04450@1.7282,BJ@0.048896,GM12878@0,H1HESC@0.242432,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0.01399,HUVEC@0.100241,K562@0,MCF7@0.042688,NHEK@0.004713,NHLF@0.96543,SKNSHRA@0.326519, 0 0 0 0 ENSG00000255864.1 ENST00000456299.2 chr12:24484220-24715478 4 572 230680 intergenic -3.18 0 0,1,0 1 0,0,1 337.017482517483 57.7637419802324 406.325 218.363636363636 49.7376148777527 208.073 221.517482517483 49.2592465753424 190.891 0 0 cat,chimp,cow,dog,elephant,guinea_pig,horse,human,macaque,orangutan,panda,rabbit, lincRNA lincRNA A549@0,AG04450@1.7282,BJ@0.048896,GM12878@0,H1HESC@0.242432,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0.01399,HUVEC@0.100241,K562@0,MCF7@0.042688,NHEK@0.004713,NHLF@0.96543,SKNSHRA@0.326519, 0 0 0 0 ENSG00000255864.1 ENST00000538905.1 chr12:24520869-24715316 3 829 193614 intergenic -16.59 0 0,0,0 1 0,0,1 62.5705669481303 61.5951222535561 500.423 54.4451145958987 52.4926451599574 285.089 54.8275030156815 52.0442994824755 269.058 0 0 cat,chimp,cow,dog,elephant,guinea_pig,horse,human,macaque,orangutan,panda,pig,rabbit, lincRNA lincRNA A549@0,AG04450@1.7282,BJ@0.048896,GM12878@0,H1HESC@0.242432,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0.01399,HUVEC@0.100241,K562@0,MCF7@0.042688,NHEK@0.004713,NHLF@0.96543,SKNSHRA@0.326519, 0 0 0 0 ENSG00000197503.4 ENST00000483544.1 chr12:24719898-24737102 4 1706 15492 intergenic -0.61 1 0,0,0 0 0,1,0 5.88042203985932 8.81932610379551 0 0 13.2103666408469 0 0 13.56700232378 0 0 1 chimp,human,orangutan, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0.012693,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000255745.1 ENST00000536131.1 chr12:24857499-24927147 5 665 68975 intergenic -2.35 1 0,0,0 0 0,0,0 0 50.3237404856832 0 7.61503759398496 48.8491047480972 0 10.4255639097744 49.6577165639724 0 0 0 chimp,dog,elephant,horse,human,macaque,orangutan,panda,rabbit, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0.06853,HEPG2@0.976702,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000256482.1 ENST00000545410.1 chr12:24983355-24989492 2 449 5686 exonic -8.14 0 0,0,0 0 0,0,0 30.0445434298441 33.1960956735842 16.5 57.0601336302895 50.0847696095674 28.654 61.988864142539 60.1334857544847 29.818 0 0 cat,chimp,cow,dog,elephant,guinea_pig,horse,human,macaque,mouse,opossum,orangutan,panda,pig,rabbit, antisense antisense A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0.009079,HSMM@0.0045625,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000255921.1 ENST00000546353.1 chr12:25102097-25113092 4 724 10265 exonic -0.32 0 0,1,0 0 0,0,0 0 0 0 0 0 11.138 0 0 11.25 0 0 chimp,human,macaque,orangutan,panda, antisense antisense A549@0.0257465,AG04450@0.0061575,BJ@0.003382,GM12878@0.405859,H1HESC@0.059262,HELAS3@0,HEPG2@0.0117065,HMEC@0.005624,HSMM@0.0062625,HUVEC@0.028032,K562@0.0407195,MCF7@0,NHEK@0.003167,NHLF@0,SKNSHRA@0.0187315, 0 0 0 0 ENSG00000257009.1 ENST00000546101.1 chr12:25738928-25745859 2 534 6395 intronic 0 0 0,0,0 0 0,0,0 0 4.65363565285379 0 0 0 0 0 1.60250195465207 0 0 1 chimp,human,macaque,orangutan, sense_intronic sense_intronic A549@0.0057915,AG04450@0.0016775,BJ@0.004361,GM12878@0.005456,H1HESC@0,HELAS3@0.0011235,HEPG2@0.001625,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0.0108243,NHLF@0,SKNSHRA@0.173592, 0 0 0 0 ENSG00000257009.1 ENST00000535066.1 chr12:25738944-25745862 2 535 6381 intronic 0 0 0,0,0 0 0,0,0 0 4.66384579219558 0 0 0 0 0 1.60601786553832 0 0 1 chimp,human,macaque,orangutan, sense_intronic sense_intronic A549@0.0057915,AG04450@0.0016775,BJ@0.004361,GM12878@0.005456,H1HESC@0,HELAS3@0.0011235,HEPG2@0.001625,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0.0108243,NHLF@0,SKNSHRA@0.173592, 0 0 0 0 ENSG00000256686.1 ENST00000536949.1 chr12:25935640-25967105 3 769 30692 intergenic 0.72 0 0,0,0 0 0,0,0 0 11.8309983057474 0 3.7295188556567 24.9747491202919 2.48 11.8556566970091 160.131858464747 2.59 0 0 chimp,guinea_pig,horse,human,macaque,orangutan, lincRNA lincRNA A549@0,AG04450@0.0076695,BJ@0.0031345,GM12878@0.014456,H1HESC@0,HELAS3@0.0068755,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0.0441735,NHEK@0.00629333,NHLF@0,SKNSHRA@0.016026, 0 0 0 0 ENSG00000256440.1 ENST00000545704.1 chr12:25984350-25987116 2 371 2393 intergenic -4.17 0 0,0,0 0 0,0,0 0 0 0 3.22102425876011 3.42122858336816 3.585 3.27493261455526 3.60384454659423 3.885 0 0 cat,chimp,cow,horse,human,macaque,panda,rabbit, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000256256.1 ENST00000544399.1 chr12:26035888-26038788 2 484 2414 intergenic -2.24 0 0,0,0 0 0,0,0 46.7272727272727 0 0 16.2004132231405 0 4.05 30.6384297520661 2.3152444076222 9.828 0 0 chimp,cow,dog,elephant,guinea_pig,human,macaque,orangutan,rabbit,rat, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000246695.3 ENST00000545729.1 chr12:26092262-26112375 4 538 19569 intronic -3.37 0 0,0,0 1 0,0,0 0 9.57907915580765 36.723 41.5724907063197 10.1983238796055 27.35 51.6338289962825 9.55138228831315 39.81 0 0 chimp,cow,dog,horse,human,macaque,orangutan, lincRNA antisense A549@1.18451,AG04450@2.8521,BJ@2.02417,GM12878@0,H1HESC@1.78729,HELAS3@3.67925,HEPG2@0.315311,HMEC@1.79736,HSMM@2.36543,HUVEC@1.67199,K562@0.0070525,MCF7@0.415606,NHEK@0.90277,NHLF@2.47804,SKNSHRA@4.16538, 0 0 0 0 ENSG00000246695.3 ENST00000500276.2 chr12:26097790-26111511 7 2603 11106 intergenic 4.23 1 0,1,1 1 0,0,0 41.2420284287361 0.600576265081938 49.086 27.0964271993853 4.04619124797407 80.526 29.0441797925471 3.67152890329552 67.297 0 1 chimp,human,macaque,orangutan, lincRNA antisense A549@1.18451,AG04450@2.8521,BJ@2.02417,GM12878@0,H1HESC@1.78729,HELAS3@3.67925,HEPG2@0.315311,HMEC@1.79736,HSMM@2.36543,HUVEC@1.67199,K562@0.0070525,MCF7@0.415606,NHEK@0.90277,NHLF@2.47804,SKNSHRA@4.16538, 0 0 0 0 ENSG00000246695.3 ENST00000502069.2 chr12:26105796-26112314 5 616 5894 intronic 0.76 0 0,1,0 1 0,0,0 0 27.7646759416356 36.723 22.2970779220779 27.6927383780115 36.392 30.5730519480519 24.6106209704785 49.182 0 0 chimp,guinea_pig,human,macaque,orangutan, lincRNA antisense A549@1.18451,AG04450@2.8521,BJ@2.02417,GM12878@0,H1HESC@1.78729,HELAS3@3.67925,HEPG2@0.315311,HMEC@1.79736,HSMM@2.36543,HUVEC@1.67199,K562@0.0070525,MCF7@0.415606,NHEK@0.90277,NHLF@2.47804,SKNSHRA@4.16538, 0 0 0 0 ENSG00000246695.3 ENST00000545226.1 chr12:26105941-26111975 5 526 5500 exonic 0.76 0 0,1,0 0 0,0,0 0 27.0045454545455 38.22 33.2984790874525 26.2483636363636 43.343 41.0532319391635 22.6109090909091 58.864 0 0 chimp,cow,dog,human,macaque,orangutan, lincRNA antisense A549@1.18451,AG04450@2.8521,BJ@2.02417,GM12878@0,H1HESC@1.78729,HELAS3@3.67925,HEPG2@0.315311,HMEC@1.79736,HSMM@2.36543,HUVEC@1.67199,K562@0.0070525,MCF7@0.415606,NHEK@0.90277,NHLF@2.47804,SKNSHRA@4.16538, 0 0 0 0 ENSG00000246695.3 ENST00000546134.1 chr12:26107588-26110979 3 738 2649 intergenic 3.71 0 0,0,1 0 0,0,0 5.92140921409214 2.51793129482824 137.255 14.5135501355014 21.1562853907135 94.678 15.0094850948509 21.4601736504341 77.567 0 1 chimp,human,macaque,orangutan, lincRNA antisense A549@1.18451,AG04450@2.8521,BJ@2.02417,GM12878@0,H1HESC@1.78729,HELAS3@3.67925,HEPG2@0.315311,HMEC@1.79736,HSMM@2.36543,HUVEC@1.67199,K562@0.0070525,MCF7@0.415606,NHEK@0.90277,NHLF@2.47804,SKNSHRA@4.16538, 0 0 0 0 ENSG00000246695.3 ENST00000542086.1 chr12:26107738-26111998 4 811 3443 exonic 2.40 0 1,1,1 0 0,0,0 0 43.138251524833 38.459 24.8384710234279 41.1667150740633 43.343 30.0308261405672 35.317746151612 58.864 0 1 chimp,human,macaque,orangutan, lincRNA antisense A549@1.18451,AG04450@2.8521,BJ@2.02417,GM12878@0,H1HESC@1.78729,HELAS3@3.67925,HEPG2@0.315311,HMEC@1.79736,HSMM@2.36543,HUVEC@1.67199,K562@0.0070525,MCF7@0.415606,NHEK@0.90277,NHLF@2.47804,SKNSHRA@4.16538, 0 0 0 0 ENSG00000246695.3 ENST00000535436.1 chr12:26107741-26112698 4 1117 3834 intronic 2.40 0 0,1,1 0 0,0,0 0 42.6825769431403 36.723 34.5389435989257 41.886280646844 14.176 40.0107430617726 37.113719353156 26.084 0 1 chimp,human,orangutan, lincRNA antisense A549@1.18451,AG04450@2.8521,BJ@2.02417,GM12878@0,H1HESC@1.78729,HELAS3@3.67925,HEPG2@0.315311,HMEC@1.79736,HSMM@2.36543,HUVEC@1.67199,K562@0.0070525,MCF7@0.415606,NHEK@0.90277,NHLF@2.47804,SKNSHRA@4.16538, 0 0 0 0 ENSG00000246695.3 ENST00000500102.2 chr12:26107854-26110518 4 694 1964 intergenic 2.40 0 0,1,1 0 0,0,0 0 0 116.701 26.8861671469741 9.15376782077393 79.281 34.5518731988473 9.53309572301426 74.138 0 0 cat,chimp,human,macaque,orangutan, lincRNA antisense A549@1.18451,AG04450@2.8521,BJ@2.02417,GM12878@0,H1HESC@1.78729,HELAS3@3.67925,HEPG2@0.315311,HMEC@1.79736,HSMM@2.36543,HUVEC@1.67199,K562@0.0070525,MCF7@0.415606,NHEK@0.90277,NHLF@2.47804,SKNSHRA@4.16538, 0 0 0 0 ENSG00000246695.3 ENST00000537801.1 chr12:26107968-26111998 4 584 3440 exonic 0.76 0 0,1,0 0 0,0,0 0 43.1758720930233 38.459 34.4931506849315 41.2026162790698 43.343 41.7037671232877 35.3485465116279 58.864 0 0 cat,chimp,human,macaque,orangutan, lincRNA antisense A549@1.18451,AG04450@2.8521,BJ@2.02417,GM12878@0,H1HESC@1.78729,HELAS3@3.67925,HEPG2@0.315311,HMEC@1.79736,HSMM@2.36543,HUVEC@1.67199,K562@0.0070525,MCF7@0.415606,NHEK@0.90277,NHLF@2.47804,SKNSHRA@4.16538, 0 0 0 0 ENSG00000256894.1 ENST00000535914.1 chr12:26278088-26279017 3 433 492 intronic 0 0 0,1,1 1 0,0,0 320.348729792148 174.94512195122 188.433 263.59584295612 202.345528455285 139.828 249.956120092379 207.270325203252 129.347 0 0 chimp,guinea_pig,horse,human,macaque,opossum,orangutan,panda,pig, lincRNA antisense A549@0.025005,AG04450@0.03997,BJ@0.078762,GM12878@0.008765,H1HESC@0,HELAS3@0.0353705,HEPG2@0.0048195,HMEC@0.233655,HSMM@0.0740305,HUVEC@0.004296,K562@0,MCF7@0.0195605,NHEK@0.015279,NHLF@0.018862,SKNSHRA@0.165612, 0 0 0 0 ENSG00000256894.1 ENST00000545819.1 chr12:26278246-26279550 3 563 737 intronic 0 0 0,1,0 0 0,0,0 178.66785079929 269.507462686567 73.542 202.422735346359 204.366350067843 53.516 190.637655417407 189.431478968792 57.975 0 0 chimp,cow,guinea_pig,horse,human,macaque,mouse,opossum,orangutan,panda,pig, lincRNA antisense A549@0.025005,AG04450@0.03997,BJ@0.078762,GM12878@0.008765,H1HESC@0,HELAS3@0.0353705,HEPG2@0.0048195,HMEC@0.233655,HSMM@0.0740305,HUVEC@0.004296,K562@0,MCF7@0.0195605,NHEK@0.015279,NHLF@0.018862,SKNSHRA@0.165612, 0 0 0 0 ENSG00000256234.1 ENST00000540392.1 chr12:26364097-26488789 4 695 123991 intronic 4.41 0 0,0,1 0 0,1,1 42.5338129496403 24.9500366962118 36.945 17.5985611510791 18.0482535022703 20.66 17.9294964028777 19.5541127985096 27.775 0 0 cat,chimp,cow,dog,elephant,guinea_pig,horse,human,macaque,mouse,orangutan,panda,pig,rabbit, antisense antisense A549@0,AG04450@0,BJ@0,GM12878@0.109592,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0.005858,HSMM@0,HUVEC@0.01,K562@0,MCF7@0.00252,NHEK@0.00101667,NHLF@0,SKNSHRA@0.0049065, 0 0 0 0 ENSG00000255750.1 ENST00000540625.1 chr12:26383752-26472653 3 480 88417 exonic 4.12 0 0,0,1 0 0,0,0 291.164583333333 22.8369431217978 34.875 308.44375 18.4722508114955 7.732 244.247916666667 19.9210445954963 13.853 0 0 cat,chimp,cow,dog,elephant,guinea_pig,horse,human,macaque,mouse,opossum,orangutan,panda,pig,rabbit, antisense antisense A549@0.015946,AG04450@0.029856,BJ@0,GM12878@0.3076,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0.002906,HUVEC@0,K562@0,MCF7@0.00332,NHEK@0.055147,NHLF@0,SKNSHRA@0.057029, 0 0 0 0 ENSG00000255750.1 ENST00000537525.1 chr12:26383782-26424755 3 491 40478 exonic 4.12 0 0,1,0 0 0,0,0 220.578411405295 25.6545283857898 27.16 237.535641547862 19.3160729285044 47.054 184.617107942974 20.5954098522654 43.854 0 0 cat,chimp,dog,elephant,guinea_pig,human,panda, antisense antisense A549@0.015946,AG04450@0.029856,BJ@0,GM12878@0.3076,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0.002906,HUVEC@0,K562@0,MCF7@0.00332,NHEK@0.055147,NHLF@0,SKNSHRA@0.057029, 0 0 0 0 ENSG00000255750.1 ENST00000541940.1 chr12:26384327-26424853 3 705 39817 exonic -3.34 0 0,1,0 0 0,0,0 46.2255319148936 25.4954165306276 27.16 30.9957446808511 18.8826882989678 47.054 20.6397163120567 20.3544465931637 43.854 0 0 cat,chimp,cow,dog,guinea_pig,horse,human,macaque,mouse,orangutan,panda, antisense antisense A549@0.015946,AG04450@0.029856,BJ@0,GM12878@0.3076,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0.002906,HUVEC@0,K562@0,MCF7@0.00332,NHEK@0.055147,NHLF@0,SKNSHRA@0.057029, 0 0 0 0 ENSG00000255858.1 ENST00000539552.1 chr12:26468648-26470746 2 473 1623 intergenic 1.41 0 0,0,0 0 0,0,0 0 0 0 0 0 0 0 0 0 0 0 chimp,elephant,guinea_pig,horse,human,macaque,orangutan,panda, antisense lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0.0143545, 0 0 0 0 ENSG00000255968.1 ENST00000535324.1 chr12:26471886-26574395 6 769 101730 intronic -0.74 0 0,0,0 0 0,0,0 0 20.1193453258626 71.352 17.1287386215865 14.3776270520004 36.553 17.6007802340702 17.9079524230807 39.982 0 0 cat,chimp,cow,elephant,horse,human,macaque,orangutan,panda,pig, antisense antisense A549@0,AG04450@0,BJ@0,GM12878@0.0030245,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0.0034705, 0 0 0 0 ENSG00000256185.1 ENST00000537724.1 chr12:26488797-26489883 2 170 914 intergenic 0 0 0,1,0 0 0,1,1 58.2352941176471 33.9223194748359 0 58.2705882352941 16.5973741794311 8.744 65.8647058823529 23.1969365426696 9.641 0 0 chimp,dog,human,macaque,orangutan,panda, lincRNA lincRNA A549@0.382006,AG04450@0.119264,BJ@0.0489405,GM12878@3.90732,H1HESC@0.038508,HELAS3@0.447061,HEPG2@0.919207,HMEC@0.095224,HSMM@0.059814,HUVEC@0.233672,K562@0,MCF7@0.130167,NHEK@0.18832,NHLF@0.011344,SKNSHRA@0.385213, 0 0 0 0 ENSG00000234428.2 ENST00000414098.2 chr12:26776302-26802412 3 873 25233 intronic -2.81 0 0,0,0 0 0,0,0 60.0389461626575 20.3948004597155 39.783 62.4856815578465 21.5614473110609 17.238 70.2817869415807 26.3927000356676 17.049 0 0 cat,chimp,cow,dog,elephant,guinea_pig,horse,human,macaque,orangutan,pig, antisense antisense A549@0,AG04450@0.005117,BJ@0,GM12878@0.018337,H1HESC@0,HELAS3@0,HEPG2@0.01733,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0.00518, 0 0 0 0 ENSG00000247903.1 ENST00000500632.1 chr12:27124519-27132515 2 2547 5447 intronic -9.46 0 0,1,1 0 0,0,0 4.18688653317629 43.1290618689187 0 4.98665096191598 31.9539195887645 17.763 4.97447978013349 39.4532770332293 21.391 0 1 chimp,human,macaque,orangutan, antisense antisense A549@0.0077555,AG04450@0.0042885,BJ@0.004706,GM12878@0.01799,H1HESC@0.004567,HELAS3@0.009357,HEPG2@0.0055095,HMEC@0,HSMM@0,HUVEC@0,K562@0.0209555,MCF7@0.006969,NHEK@0.00616233,NHLF@0.001531,SKNSHRA@0.0207985, 0 0 0 0 ENSG00000256226.1 ENST00000538920.1 chr12:27258084-27314326 2 349 55891 intergenic 0.50 0 0,0,0 0 0,0,0 0 0.291281243849636 0 0 10.1257984290852 0 0 15.7275589987655 4.86 0 0 chimp,horse,human,macaque,orangutan, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0.0476205,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0.0054105,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000256226.1 ENST00000540595.1 chr12:27301216-27314199 2 378 12603 intergenic -1.99 0 0,1,0 0 0,0,0 0 0 0 13.7777777777778 2.46116004126002 0 14.3888888888889 6.80964849638975 4.86 0 1 chimp,human,macaque,orangutan, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0.0476205,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0.0054105,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000245311.2 ENST00000500498.2 chr12:27542722-27599558 4 800 56030 exonic 2.84 1 0,0,0 0 0,0,0 10.20625 10.4151882919864 0 15.275 11.033606996252 0 26.63125 15.2385150812065 0 0 0 cat,chimp,cow,dog,elephant,horse,human,macaque,orangutan,panda,pig,rabbit, antisense antisense A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000248100.2 ENST00000506925.2 chr12:27699983-27705706 2 2637 3084 intronic 1.18 0 0,0,0 0 0,0,0 0 3.56679636835279 0 5.37315130830489 3.88391699092088 0 7.50436101630641 4.06939040207523 2.673 0 0 chimp,human,macaque,orangutan,panda, lincRNA lincRNA A549@0.0127,AG04450@0.004487,BJ@0.0027115,GM12878@0,H1HESC@0.001572,HELAS3@0.041083,HEPG2@0.025371,HMEC@0.003103,HSMM@0.015905,HUVEC@0.0011275,K562@0,MCF7@0,NHEK@0.00199667,NHLF@0.0429405,SKNSHRA@0.004622, 0 0 0 0 ENSG00000256377.1 ENST00000536317.1 chr12:27849321-27863703 4 1106 13270 exonic 3.94 1 0,1,0 0 0,0,0 83.3634719710669 10.2800301431801 0 114.173598553345 10.6820648078372 7.079 156.478300180832 49.2951770911831 7.296 0 0 chimp,cow,horse,human,macaque,orangutan, antisense antisense A549@0,AG04450@0.003408,BJ@0.0137265,GM12878@0.0059995,H1HESC@0,HELAS3@0,HEPG2@0.0415935,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0.012896, 0 0 0 0 ENSG00000256377.1 ENST00000536922.1 chr12:27849489-27857344 3 669 7182 exonic -2.18 0 0,0,0 0 0,0,0 137.817638266069 18.9941520467836 0 187.751868460389 18.6262879420774 0 258.692077727952 89.6180729601782 0 0 0 chimp,dog,elephant,horse,human,macaque,marmoset,mouse,orangutan,panda,rabbit,rat, antisense antisense A549@0,AG04450@0.003408,BJ@0.0137265,GM12878@0.0059995,H1HESC@0,HELAS3@0,HEPG2@0.0415935,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0.012896, 0 0 0 0 ENSG00000256377.1 ENST00000542660.1 chr12:27849834-27863664 3 688 13138 exonic 2.03 0 0,1,0 0 0,0,0 209.168604651163 0 0 163.297965116279 6.37144161972903 7.079 244.773255813953 43.8553813365809 7.296 0 0 cat,chimp,cow,dog,guinea_pig,human,macaque,mouse,opossum,orangutan,pig,rabbit,rat, antisense antisense A549@0,AG04450@0.003408,BJ@0.0137265,GM12878@0.0059995,H1HESC@0,HELAS3@0,HEPG2@0.0415935,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0.012896, 0 0 0 0 ENSG00000256504.1 ENST00000538640.1 chr12:27857501-27861296 2 425 3368 intergenic 0.90 1 0,0,0 0 0,0,0 0 0 0 0 0.702790973871734 32.538 0 0.726840855106888 73.846 0 1 chimp,human,orangutan, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0.010677,HUVEC@0,K562@0,MCF7@0,NHEK@0.0967303,NHLF@0,SKNSHRA@0.0485295, 180 2 0 0 ENSG00000256747.1 ENST00000545904.1 chr12:27932754-27934000 2 677 567 exonic 0 0 0,1,1 0 0,0,0 562.127031019202 206.79012345679 105.19 368.850812407681 124.798941798942 83.472 380.243722304284 192.776014109347 75.183 0 0 chimp,cow,dog,guinea_pig,horse,human,macaque,mouse,opossum,orangutan,panda,pig,rabbit,rat, antisense antisense A549@0.008136,AG04450@0,BJ@0.016784,GM12878@0.0078215,H1HESC@0.0817495,HELAS3@0.012295,HEPG2@0.0754475,HMEC@0.036182,HSMM@0.0110205,HUVEC@0,K562@0.010456,MCF7@0.023202,NHEK@0.0169777,NHLF@0.005747,SKNSHRA@0.0246415, 0 0 0 0 ENSG00000256512.1 ENST00000543527.1 chr12:27951574-27953641 2 189 1876 exonic 0 0 0,1,0 0 0,0,0 0 31.7036247334755 0 0 9.80703624733475 6.177 0 19.8688699360341 6.355 0 0 chimp,cow,dog,elephant,horse,human,macaque,orangutan,panda, antisense antisense A549@0.043384,AG04450@0,BJ@0.01267,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0.012859,MCF7@0,NHEK@0.020279,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000257042.1 ENST00000538113.1 chr12:28111450-28122746 2 790 10504 exonic 0.32 0 0,1,1 0 0,0,0 225.782278481013 94.13261614623 291.477 197.079746835443 59.6707920792079 338.85 178.711392405063 64.0804455445545 352.338 0 0 cat,chimp,cow,dog,elephant,guinea_pig,horse,human,macaque,mouse,orangutan,panda,pig,rabbit,rat, antisense antisense A549@0.07722,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0.05687,HSMM@0,HUVEC@0.008826,K562@0.011727,MCF7@0.007788,NHEK@0.141972,NHLF@0.0024365,SKNSHRA@0.052897, 0 0 0 0 ENSG00000247934.3 ENST00000473753.2 chr12:28316231-28343299 4 735 26327 intronic -0.95 0 0,1,0 0 0,0,0 0 3.57169445816082 49.316 0 6.2595814183158 28.435 0 17.4091996809359 25.465 0 0 cat,chimp,cow,human,macaque,orangutan,panda, antisense antisense A549@0.592723,AG04450@0.420423,BJ@0.442512,GM12878@1.21409,H1HESC@0.491844,HELAS3@1.38042,HEPG2@0.731865,HMEC@0.307495,HSMM@0.044167,HUVEC@0.075386,K562@1.00102,MCF7@0.533069,NHEK@0.321746,NHLF@0.163205,SKNSHRA@1.09254, 0 0 0 0 ENSG00000256513.1 ENST00000537327.1 chr12:28974908-28978764 2 431 3423 intergenic 0.50 1 0,1,0 0 0,0,0 0 8.23079170318434 0 0 5.53549517966696 2.07 0 7.68039731229915 2.187 0 1 chimp,human,macaque,orangutan, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0.00304233,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000246331.1 ENST00000500076.1 chr12:30908008-30933672 2 1549 24113 intergenic 0.32 1 0,1,0 0 0,0,0 11.1362169141382 1.69796375399162 78.521 0.462879276952873 1.9077261228383 31.736 0.526791478373144 4.24924314685025 14.259 0 1 chimp,human,macaque, lincRNA lincRNA A549@0.022808,AG04450@0.022476,BJ@0.015765,GM12878@0.004485,H1HESC@0.0154385,HELAS3@0.0085555,HEPG2@0.0017585,HMEC@0.00792,HSMM@0.109785,HUVEC@0.02366,K562@0.0246095,MCF7@0.009133,NHEK@0.01294,NHLF@0.015096,SKNSHRA@0.140571, 0 0 0 0 ENSG00000226472.3 ENST00000222396.5 chr12:31149973-31158938 4 612 8347 intergenic 2.05 0 0,0,0 0 0,0,0 0 4.58763627650653 0 41.7647058823529 16.2054630406134 0 45.4509803921569 16.9636995327663 0 0 0 chimp,human,macaque,marmoset,orangutan,rabbit, lincRNA lincRNA A549@0.131011,AG04450@0.0097455,BJ@0.0234095,GM12878@0.0107035,H1HESC@0.128619,HELAS3@0.093291,HEPG2@0.228372,HMEC@0,HSMM@0.439076,HUVEC@0.009089,K562@0.013043,MCF7@0.217156,NHEK@0,NHLF@0,SKNSHRA@0.067512, 0 0 0 0 ENSG00000226472.3 ENST00000418254.2 chr12:31150189-31158921 3 555 8173 intergenic -14.64 0 0,0,0 0 0,0,0 0 4.6853052734614 0 46.0540540540541 16.5504710632571 0 50.1189189189189 17.3248501162364 0 1 1 chimp,human,macaque,marmoset,orangutan, lincRNA lincRNA A549@0.131011,AG04450@0.0097455,BJ@0.0234095,GM12878@0.0107035,H1HESC@0.128619,HELAS3@0.093291,HEPG2@0.228372,HMEC@0,HSMM@0.439076,HUVEC@0.009089,K562@0.013043,MCF7@0.217156,NHEK@0,NHLF@0,SKNSHRA@0.067512, 0 0 0 0 ENSG00000226472.3 ENST00000544329.1 chr12:31151851-31158907 2 563 6491 intergenic -9.88 0 0,0,0 0 0,0,0 0 0 0 45.3996447602131 19.0958249884455 0 49.4067495559503 20.020335849638 0 0 0 chimp,horse,human,macaque,orangutan, lincRNA lincRNA A549@0.131011,AG04450@0.0097455,BJ@0.0234095,GM12878@0.0107035,H1HESC@0.128619,HELAS3@0.093291,HEPG2@0.228372,HMEC@0,HSMM@0.439076,HUVEC@0.009089,K562@0.013043,MCF7@0.217156,NHEK@0,NHLF@0,SKNSHRA@0.067512, 0 0 0 0 ENSG00000256984.1 ENST00000537555.1 chr12:31165437-31168601 2 346 2816 intergenic 2.94 0 0,0,0 0 0,0,0 0 0 0 0 0 60.389 167.21098265896 20.9616477272727 55.294 0 0 cat,chimp,guinea_pig,horse,human,macaque,marmoset,orangutan,panda, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0.080466,HEPG2@0,HMEC@0,HSMM@0.0065505,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0.298783, 0 0 0 0 ENSG00000245614.2 ENST00000500527.1 chr12:31173697-31226781 3 2028 51052 exonic 5.43 0 0,1,1 1 0,0,0 0 0 0 0 0.701461255190786 0 0 2.33064326568989 0 0 1 chimp,human,macaque,orangutan, lincRNA processed_transcript A549@0.413353,AG04450@0.119062,BJ@0.081877,GM12878@0.190439,H1HESC@0.89978,HELAS3@0.872656,HEPG2@0.671331,HMEC@0.079864,HSMM@0.0504685,HUVEC@0.115225,K562@0.217733,MCF7@1.20209,NHEK@0.0354313,NHLF@0.011464,SKNSHRA@0.410917, 0 0 0 0 ENSG00000245614.2 ENST00000535870.1 chr12:31203850-31213684 2 569 9263 intergenic -0.65 0 0,0,1 0 0,0,0 0 0 0 0 0 0 0 0 0 0 1 chimp,human,macaque,orangutan, lincRNA processed_transcript A549@0.413353,AG04450@0.119062,BJ@0.081877,GM12878@0.190439,H1HESC@0.89978,HELAS3@0.872656,HEPG2@0.671331,HMEC@0.079864,HSMM@0.0504685,HUVEC@0.115225,K562@0.217733,MCF7@1.20209,NHEK@0.0354313,NHLF@0.011464,SKNSHRA@0.410917, 0 0 0 0 ENSG00000256232.1 ENST00000541749.1 chr12:31516415-31522235 2 866 4952 intergenic 5.84 1 0,0,1 0 0,0,0 0 0 37.044 0 3.65306946688207 33.545 0 113.411348949919 40.349 0 0 cat,chimp,cow,dog,elephant,horse,human,macaque,marmoset,orangutan,panda, lincRNA lincRNA A549@0.0368235,AG04450@0.0486355,BJ@0,GM12878@0,H1HESC@0.485209,HELAS3@0.0026925,HEPG2@0.004909,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0.003042,NHLF@0,SKNSHRA@0.0252095, 0 0 0 0 ENSG00000255867.1 ENST00000536397.1 chr12:31742857-31768285 3 561 24863 intronic -2.69 0 0,1,0 1 0,0,0 28.5436720142602 3.74214696537023 33.899 44.8823529411765 12.5886658890721 42.835 45.0891265597148 24.1041306358847 40.97 0 0 chimp,dog,human,macaque,marmoset,orangutan, antisense antisense A549@0.26922,AG04450@0.025557,BJ@0.0189475,GM12878@0,H1HESC@0.0543805,HELAS3@0.281914,HEPG2@0.222191,HMEC@0,HSMM@0.0072965,HUVEC@0.0278385,K562@0.0155015,MCF7@0.0248095,NHEK@0.00119367,NHLF@0,SKNSHRA@0.0433835, 0 0 0 0 ENSG00000255867.1 ENST00000537346.1 chr12:31744246-31768600 3 1103 23247 intergenic 0 0 0,0,0 0 0,0,0 0 2.27061556329849 40.256 28.2130553037171 6.38891039704048 153.329 61.5367180417044 19.1100357035316 148.506 0 1 chimp,human, antisense antisense A549@0.26922,AG04450@0.025557,BJ@0.0189475,GM12878@0,H1HESC@0.0543805,HELAS3@0.281914,HEPG2@0.222191,HMEC@0,HSMM@0.0072965,HUVEC@0.0278385,K562@0.0155015,MCF7@0.0248095,NHEK@0.00119367,NHLF@0,SKNSHRA@0.0433835, 0 0 0 0 ENSG00000255760.1 ENST00000535163.1 chr12:32030013-32040137 2 850 9272 intergenic -6.44 0 0,1,0 0 0,0,0 0 0 0 0 0.773295944779983 0 0 1.72940034512511 0 1 1 chimp,human,macaque,marmoset,orangutan, lincRNA lincRNA A549@0.0050955,AG04450@0,BJ@0,GM12878@0.0423605,H1HESC@0.002435,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0.0054505,MCF7@0,NHEK@0,NHLF@0.219289,SKNSHRA@0, 0 0 0 0 ENSG00000245482.2 ENST00000501954.2 chr12:34175216-34199352 2 2177 21957 exonic 3.96 0 0,0,0 0 0,0,0 0 3.81381791683746 0 79.0496095544327 13.6811950630778 0 84.7354157096922 26.4688709750877 0 0 0 chimp,elephant,human,macaque,marmoset,orangutan,pig, lincRNA non_coding A549@0.002535,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0.0061275,K562@0.0371795,MCF7@0.0047045,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000256538.1 ENST00000537655.1 chr12:34190373-34209675 3 791 18507 intergenic 7.30 0 0,0,0 0 0,0,0 0 2.40644080618145 0 0 5.58421137947804 0 0 6.51526449451559 0 0 0 chimp,dog,guinea_pig,horse,human,macaque,marmoset,orangutan,panda,pig, lincRNA lincRNA A549@0.129009,AG04450@0.031278,BJ@0.015345,GM12878@0.435181,H1HESC@0.213544,HELAS3@0.0576975,HEPG2@0.021906,HMEC@0.010314,HSMM@0.0212905,HUVEC@0.18742,K562@0.331755,MCF7@0.0508145,NHEK@0.084458,NHLF@0.031728,SKNSHRA@0.113202, 0 0 0 0 ENSG00000255628.1 ENST00000538025.1 chr12:34302774-34315173 3 531 11864 intergenic -8.99 0 0,0,0 0 0,0,0 0 0 0 0 0 0 0 17.3749157113958 0 0 1 chimp,human,macaque,orangutan, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000255652.1 ENST00000545923.1 chr12:34343972-34371788 4 622 27188 intergenic -9.63 0 0,1,0 0 0,0,0 0 0 0 0 0 0 0 0 0 0 0 chimp,human,macaque,marmoset,orangutan,pig, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0.025839,NHEK@0,NHLF@0,SKNSHRA@0.010886, 0 0 0 0 ENSG00000223914.1 ENST00000457989.1 chr12:40550041-40561414 2 468 10903 intergenic -3.80 0 0,0,0 0 0,0,0 0 4.09804640924516 9.405 0 1.89718426121251 17.391 7.26923076923077 2.51783912684582 22.913 0 0 cat,chimp,cow,dog,elephant,guinea_pig,horse,human,macaque,marmoset,orangutan,panda,pig,rat, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0.009276,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000223914.1 ENST00000417422.1 chr12:40560054-40561509 2 557 896 intergenic -3.80 0 0,0,1 0 0,0,0 0 0 0 0 0 0 0 0 0 0 0 chimp,elephant,horse,human,macaque,marmoset,orangutan,rabbit, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0.009276,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000225342.1 ENST00000412812.1 chr12:40579811-40617605 4 581 37207 intronic -0.50 0 0,0,0 0 0,0,0 0 1.86214959550622 43.68 0 1.5066519740909 45.57 0 2.6120353696885 44.982 0 0 chimp,human,macaque,marmoset,orangutan, antisense antisense A549@0.072888,AG04450@0.0078575,BJ@0.0290055,GM12878@0.476612,H1HESC@0,HELAS3@0.0119855,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0.0035145,NHEK@0,NHLF@0.0066705,SKNSHRA@0.0038785, 0 0 0 0 ENSG00000247774.1 ENST00000500365.1 chr12:47602203-47610226 3 2499 5520 exonic 1.41 0 0,1,0 0 0,0,0 0 3.3695652173913 34.972 0 1.48134057971014 37.137 1.6530612244898 2.52735507246377 40.118 0 1 chimp,human,macaque,orangutan, lincRNA lincRNA A549@0.131832,AG04450@0.0023665,BJ@0.001968,GM12878@0.571781,H1HESC@0.0207745,HELAS3@0,HEPG2@0,HMEC@0.003273,HSMM@0.001822,HUVEC@0,K562@0.095576,MCF7@0.016253,NHEK@0.0192317,NHLF@0,SKNSHRA@0.001817, 0 0 0 0 ENSG00000250952.2 ENST00000527253.1 chr12:49962182-50001023 3 4479 34358 exonic 15.33 0 0,1,0 1 0,0,0 40.6405447644564 5.34347168054019 119.5 61.9707524000893 15.4490366144712 85.425 54.4905112748381 26.5268350893533 84.721 1 1 chimp,human,macaque,marmoset,orangutan, antisense antisense A549@0.307032,AG04450@0.065245,BJ@0.086745,GM12878@0.203412,H1HESC@0.306009,HELAS3@0.306184,HEPG2@0.444434,HMEC@0.005731,HSMM@0.097618,HUVEC@0.281777,K562@0.157246,MCF7@0.309219,NHEK@0.0353723,NHLF@0.188599,SKNSHRA@0.538029, 0 0 0 0 ENSG00000250952.2 ENST00000508736.1 chr12:49993609-49998502 2 1859 3032 exonic 8.08 0 0,0,1 0 0,0,0 87.4066702528241 4.13588390501319 5.434 133.070467993545 22.8934696569921 39.363 113.12426035503 26.7209762532982 51.992 0 0 cat,chimp,cow,dog,elephant,horse,human,macaque,marmoset,mouse,orangutan,panda,rabbit,rat, antisense antisense A549@0.307032,AG04450@0.065245,BJ@0.086745,GM12878@0.203412,H1HESC@0.306009,HELAS3@0.306184,HEPG2@0.444434,HMEC@0.005731,HSMM@0.097618,HUVEC@0.281777,K562@0.157246,MCF7@0.309219,NHEK@0.0353723,NHLF@0.188599,SKNSHRA@0.538029, 0 0 0 0 ENSG00000249641.1 ENST00000512916.1 chr12:54329796-54333427 3 721 2906 exonic 2.82 0 1,1,1 1 0,0,0 143.402219140083 151.45526496903 148.511 219.074895977809 242.439435650379 191.76 213.352288488211 234.592567102546 131.416 0 0 chimp,cow,elephant,guinea_pig,horse,human,macaque,marmoset,panda, antisense antisense A549@0.300957,AG04450@0,BJ@0.448776,GM12878@0,H1HESC@0,HELAS3@3.18271,HEPG2@0.252429,HMEC@1.44217,HSMM@1.24065,HUVEC@0,K562@0,MCF7@2.28397,NHEK@1.6609,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000228630.1 ENST00000424518.1 chr12:54356092-54368740 7 2414 10222 intronic 11.55 1 0,1,1 0 0,0,0 63.4896437448219 195.108589317159 347.009 84.8492129246065 212.807082762669 347.21 77.1454018227009 205.947368421053 362.345 0 0 chimp,cow,elephant,horse,human,macaque,marmoset,orangutan,panda,rabbit, lincRNA non_coding A549@0.144544,AG04450@0.000926,BJ@2.62866,GM12878@0,H1HESC@0.001202,HELAS3@1.82868,HEPG2@0.044619,HMEC@0.113601,HSMM@1.60444,HUVEC@0,K562@0.0090555,MCF7@2.02518,NHEK@1.04212,NHLF@0,SKNSHRA@0.0039665, 0 0 0 0 ENSG00000228630.1 ENST00000455246.1 chr12:54357533-54368731 6 912 10276 intronic 1.62 0 0,1,1 0 0,0,0 92.702850877193 195.534254573764 343.283 107.737938596491 214.062572985597 341.954 91.0559210526316 207.228785519657 357.197 0 0 chimp,elephant,guinea_pig,horse,human,macaque,marmoset,orangutan,panda, lincRNA non_coding A549@0.144544,AG04450@0.000926,BJ@2.62866,GM12878@0,H1HESC@0.001202,HELAS3@1.82868,HEPG2@0.044619,HMEC@0.113601,HSMM@1.60444,HUVEC@0,K562@0.0090555,MCF7@2.02518,NHEK@1.04212,NHLF@0,SKNSHRA@0.0039665, 0 0 0 0 ENSG00000228630.1 ENST00000425595.1 chr12:54357586-54360414 4 568 2254 intergenic 1.62 0 0,0,0 0 0,0,0 132.855633802817 161.866459627329 0 157.491197183099 178.045696539485 10.509 133.100352112676 172.523513753327 11.154 0 0 chimp,cow,dog,elephant,guinea_pig,horse,human,macaque,marmoset,orangutan,panda,rabbit, lincRNA non_coding A549@0.144544,AG04450@0.000926,BJ@2.62866,GM12878@0,H1HESC@0.001202,HELAS3@1.82868,HEPG2@0.044619,HMEC@0.113601,HSMM@1.60444,HUVEC@0,K562@0.0090555,MCF7@2.02518,NHEK@1.04212,NHLF@0,SKNSHRA@0.0039665, 0 0 0 0 ENSG00000228630.1 ENST00000453875.1 chr12:54357685-54361139 5 557 2889 intergenic -2.71 0 0,1,0 0 0,0,0 143.24236983842 124.363793700242 116.518 174.093357271095 136.511249567324 120.786 163.412926391382 129.631360332295 122.104 0 0 chimp,cow,dog,guinea_pig,horse,human,macaque,marmoset,orangutan,panda, lincRNA non_coding A549@0.144544,AG04450@0.000926,BJ@2.62866,GM12878@0,H1HESC@0.001202,HELAS3@1.82868,HEPG2@0.044619,HMEC@0.113601,HSMM@1.60444,HUVEC@0,K562@0.0090555,MCF7@2.02518,NHEK@1.04212,NHLF@0,SKNSHRA@0.0039665, 0 0 0 0 ENSG00000228630.1 ENST00000439545.1 chr12:54357869-54362698 4 556 4267 intergenic 1.62 0 0,0,1 0 0,0,0 169.976618705036 125.244902741973 38.1 205.293165467626 144.60464026248 144.787 173.974820143885 140.297632997422 138.242 0 0 chimp,cow,elephant,guinea_pig,horse,human,macaque,marmoset,orangutan,panda, lincRNA non_coding A549@0.144544,AG04450@0.000926,BJ@2.62866,GM12878@0,H1HESC@0.001202,HELAS3@1.82868,HEPG2@0.044619,HMEC@0.113601,HSMM@1.60444,HUVEC@0,K562@0.0090555,MCF7@2.02518,NHEK@1.04212,NHLF@0,SKNSHRA@0.0039665, 0 0 0 0 ENSG00000251151.1 ENST00000509870.1 chr12:54377234-54378622 2 542 844 intergenic -4.22 0 0,1,0 1 0,0,0 246.629151291513 107.116113744076 659.404 196.680811808118 51.531990521327 793.348 181.105166051661 46.0651658767772 708.627 0 0 cat,chimp,cow,dog,elephant,guinea_pig,horse,human,macaque,marmoset,mouse,orangutan,panda,rabbit,rat, antisense antisense A549@0.019443,AG04450@0,BJ@0.075811,GM12878@0.005478,H1HESC@0,HELAS3@0.720578,HEPG2@0.14221,HMEC@0,HSMM@0.15332,HUVEC@0,K562@0,MCF7@0.272627,NHEK@0.0495217,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000251151.1 ENST00000513165.1 chr12:54377455-54378542 2 531 554 intergenic -11.20 0 0,1,0 1 0,0,0 162.868173258004 85.5054151624549 628.316 126.370998116761 42.442238267148 739.498 126.529190207156 34.514440433213 681.733 0 0 cat,chimp,cow,elephant,guinea_pig,horse,human,macaque,marmoset,mouse,orangutan,panda,rabbit, antisense antisense A549@0.019443,AG04450@0,BJ@0.075811,GM12878@0.005478,H1HESC@0,HELAS3@0.720578,HEPG2@0.14221,HMEC@0,HSMM@0.15332,HUVEC@0,K562@0,MCF7@0.272627,NHEK@0.0495217,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000251151.1 ENST00000514702.1 chr12:54377735-54379303 3 365 1199 exonic 10.26 0 1,1,1 1 0,0,0 388.452054794521 340.413678065054 450.99 378.147945205479 370.726438698916 495.975 331.413698630137 348.941618015013 411.606 0 0 cat,chimp,cow,dog,elephant,guinea_pig,human,macaque,marmoset,orangutan,rat, antisense antisense A549@0.019443,AG04450@0,BJ@0.075811,GM12878@0.005478,H1HESC@0,HELAS3@0.720578,HEPG2@0.14221,HMEC@0,HSMM@0.15332,HUVEC@0,K562@0,MCF7@0.272627,NHEK@0.0495217,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000250133.1 ENST00000513533.1 chr12:54388992-54390569 3 501 1072 exonic -7.44 0 0,1,1 0 0,0,0 449.948103792415 409.671641791045 96.564 301.588822355289 255.03171641791 135.069 268.249500998004 248.15578358209 141.029 0 0 cat,chimp,cow,elephant,guinea_pig,horse,human,macaque,marmoset,mouse,orangutan,panda,rat, antisense antisense A549@0.0585505,AG04450@0,BJ@0.004885,GM12878@0.0079995,H1HESC@0,HELAS3@0.206858,HEPG2@0.0811825,HMEC@0.008124,HSMM@0.647436,HUVEC@0,K562@0.0368635,MCF7@0.0300605,NHEK@0.020586,NHLF@0,SKNSHRA@0.0045095, 0 0 0 0 ENSG00000250451.1 ENST00000512427.1 chr12:54392806-54393404 2 288 308 intronic 0 1 1,1,1 0 0,0,0 255.083333333333 256.733766233766 671.011 451.652777777778 533.373376623377 609.78 415.826388888889 419.568181818182 600.909 0 0 cat,chimp,cow,elephant,guinea_pig,horse,human,macaque,marmoset,mouse,panda,rabbit,rat, antisense antisense A549@0.183929,AG04450@0,BJ@0.063787,GM12878@0,H1HESC@0,HELAS3@0.07593,HEPG2@0.014933,HMEC@0.099839,HSMM@0.093496,HUVEC@0.004437,K562@0.120351,MCF7@0.0484425,NHEK@0.0583713,NHLF@0,SKNSHRA@0.0836945, 0 0 0 0 ENSG00000250451.1 ENST00000505700.1 chr12:54392806-54393794 2 546 440 intronic 0.21 1 1,1,1 1 0,0,0 408.005494505495 351.613636363636 731 348.302197802198 584.261363636364 689.108 317.450549450549 494.097727272727 682.166 0 0 cat,chimp,cow,elephant,horse,human,macaque,marmoset,mouse,panda,rabbit,rat, antisense antisense A549@0.183929,AG04450@0,BJ@0.063787,GM12878@0,H1HESC@0,HELAS3@0.07593,HEPG2@0.014933,HMEC@0.099839,HSMM@0.093496,HUVEC@0.004437,K562@0.120351,MCF7@0.0484425,NHEK@0.0583713,NHLF@0,SKNSHRA@0.0836945, 0 0 0 0 ENSG00000248265.1 ENST00000515617.1 chr12:54452038-54516018 2 3940 60038 intergenic 2.77 0 0,1,0 0 0,0,0 44.4779187817259 48.1711082980779 39.895 47.3294416243655 57.8549085579134 118.363 53.8616751269035 56.2348512608681 136.741 0 1 chimp,human,marmoset,orangutan, lincRNA lincRNA A549@0,AG04450@0,BJ@0.038684,GM12878@0.0084555,H1HESC@0,HELAS3@0.027066,HEPG2@0.004152,HMEC@0,HSMM@0.173203,HUVEC@0.000617,K562@0.006214,MCF7@0.0067195,NHEK@0.00582433,NHLF@0.000495,SKNSHRA@0.189381, 0 0 0 0 ENSG00000249388.1 ENST00000504891.1 chr12:54475902-54496477 2 526 20047 intergenic 4.08 0 0,0,1 0 0,0,0 0 43.9284182171896 247.342 13.6292775665399 66.7873497281389 248.522 13.671102661597 68.2488651668579 229.407 0 0 cat,chimp,dog,horse,human,macaque,orangutan,panda,pig, lincRNA lincRNA A549@0,AG04450@0,BJ@0.004744,GM12878@0.0635215,H1HESC@0,HELAS3@0.005112,HEPG2@0,HMEC@0,HSMM@0.022014,HUVEC@0,K562@0.0184825,MCF7@0,NHEK@0.0399563,NHLF@0,SKNSHRA@0.311311, 50 3 0 0 ENSG00000250432.1 ENST00000513381.1 chr12:54478916-54519614 3 496 40198 intergenic 0 0 0,0,0 0 0,0,0 0 35.9947012289169 110.848 11.5645161290323 50.4939051694114 135.74 12.5322580645161 50.0271406537639 136.036 0 0 chimp,cow,elephant,human,macaque,marmoset,orangutan,panda, lincRNA lincRNA A549@0.094891,AG04450@0,BJ@0,GM12878@0.061629,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0.027258,HUVEC@0,K562@0.0373445,MCF7@0,NHEK@0.088753,NHLF@0,SKNSHRA@0.949465, 0 0 0 0 ENSG00000250432.1 ENST00000508763.1 chr12:54507797-54519675 4 715 11157 intergenic 2.77 1 0,1,1 0 0,0,0 37.3692307692308 23.8477189208569 110.848 38.5440559440559 26.3708882316035 133.7 36.8041958041958 26.9031101550596 134.976 0 0 chimp,cow,human,macaque,marmoset,orangutan,rabbit, lincRNA lincRNA A549@0.094891,AG04450@0,BJ@0,GM12878@0.061629,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0.027258,HUVEC@0,K562@0.0373445,MCF7@0,NHEK@0.088753,NHLF@0,SKNSHRA@0.949465, 0 0 0 0 ENSG00000250432.1 ENST00000504278.1 chr12:54515060-54519678 2 305 4311 intergenic 0 0 0,1,1 0 0,0,0 0 26.5924379494317 110.848 7.52459016393443 32.3787984226398 133.445 9.05245901639344 33.3648805381582 134.976 0 0 chimp,cow,horse,human,macaque,marmoset,orangutan, lincRNA lincRNA A549@0.094891,AG04450@0,BJ@0,GM12878@0.061629,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0.027258,HUVEC@0,K562@0.0373445,MCF7@0,NHEK@0.088753,NHLF@0,SKNSHRA@0.949465, 0 0 0 0 ENSG00000250432.1 ENST00000505661.1 chr12:54515063-54519776 2 408 4303 intergenic -3.61 0 0,1,1 0 0,0,0 95.4166666666667 26.6418777597025 71.46 128.117647058824 32.438996049268 82.851 125.786764705882 33.4269114571229 87.024 0 0 chimp,cow,elephant,horse,human,macaque,marmoset,mouse,orangutan,panda, lincRNA retained_intron A549@0.094891,AG04450@0,BJ@0,GM12878@0.061629,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0.027258,HUVEC@0,K562@0.0373445,MCF7@0,NHEK@0.088753,NHLF@0,SKNSHRA@0.949465, 0 0 0 0 ENSG00000250742.1 ENST00000508564.1 chr12:54519882-54526627 2 1367 5376 intergenic 16.09 0 1,1,1 1 0,0,0 22.121433796635 4.70535714285714 94.248 26.2904169714704 3.12369791666667 124.451 29.4059985369422 5.87537202380952 125.758 0 0 chimp,cow,elephant,guinea_pig,horse,human,macaque,marmoset,orangutan,panda,pig,rabbit,rat, lincRNA processed_transcript A549@0.716987,AG04450@0.006715,BJ@2.45381,GM12878@0.36005,H1HESC@0.085551,HELAS3@0.041497,HEPG2@0.0513905,HMEC@7.79413,HSMM@4.24367,HUVEC@0.199754,K562@0.010568,MCF7@0.0881455,NHEK@4.04211,NHLF@4.31376,SKNSHRA@22.9963, 0 0 0 0 ENSG00000248576.1 ENST00000504210.1 chr12:54556923-54562379 3 400 5052 intergenic -7.98 1 0,1,0 0 0,0,0 0 7.12094220110847 130.971 5.1 5.74703087885986 107.683 5.18 5.05859065716548 107.133 0 0 chimp,cow,elephant,horse,human,macaque,marmoset,orangutan,panda, antisense antisense A549@0,AG04450@0,BJ@0.006005,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0.0099775,NHEK@0,NHLF@0,SKNSHRA@0.118335, 0 0 0 0 ENSG00000224713.1 ENST00000356672.3 chr12:58005901-58011848 3 2352 3591 exonic 5.39 0 0,0,0 0 0,0,0 251.111819727891 126.250905040379 0 200.718537414966 162.031189083821 113.042 206.277636054422 172.077972709552 125.189 0 0 cat,chimp,cow,horse,human,macaque,marmoset,mouse,panda,pig, antisense antisense A549@0,AG04450@0.001076,BJ@0,GM12878@0.000968,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0.0022295,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0.0032735, 0 0 0 0 ENSG00000224713.1 ENST00000444467.1 chr12:58006122-58011828 3 2080 3622 exonic 5.39 0 0,0,1 0 0,0,0 236.448076923077 128.713694091662 0 218.436538461538 162.485919381557 115.672 223.55625 173.010215350635 128.229 0 0 cat,chimp,cow,horse,human,macaque,marmoset,mouse,panda,pig, antisense antisense A549@0,AG04450@0.001076,BJ@0,GM12878@0.000968,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0.0022295,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0.0032735, 0 0 0 0 ENSG00000245651.1 ENST00000499481.1 chr12:58263619-58290267 4 3504 23138 intergenic 2.34 1 0,1,1 0 0,0,0 70.824200913242 24.7449217737056 59.55 57.5328196347032 17.1846745613277 80.311 61.2945205479452 19.8229751923243 79.148 0 0 chimp,guinea_pig,horse,human,macaque,marmoset,orangutan, lincRNA lincRNA A549@0.004327,AG04450@0.066575,BJ@0.0053425,GM12878@0,H1HESC@0.0433295,HELAS3@0.003026,HEPG2@0.004896,HMEC@0,HSMM@0.003249,HUVEC@0.0245135,K562@0.0045795,MCF7@0,NHEK@0,NHLF@0.107895,SKNSHRA@0.0716795, 0 0 0 0 ENSG00000245867.1 ENST00000500610.1 chr12:62636214-62653509 5 1957 15330 intergenic 1.33 1 0,1,1 0 0,0,0 0 5.57540769732551 83.725 0 11.0214611872146 164.537 0 15.4560991519896 190.135 1 1 chimp,human,macaque,marmoset,orangutan, lincRNA lincRNA A549@0.212426,AG04450@0.142631,BJ@0.095867,GM12878@0.449227,H1HESC@0.21622,HELAS3@0.303993,HEPG2@0.0684895,HMEC@0.043826,HSMM@0.024656,HUVEC@0.109676,K562@5.44618,MCF7@0.126723,NHEK@0.142331,NHLF@0.0208515,SKNSHRA@0.177737, 0 0 0 0 ENSG00000249753.2 ENST00000509615.2 chr12:64017568-64189498 2 273 171655 intronic 0 0 0,0,1 0 0,0,0 0 6.07796452186071 0 0 13.7813463050887 0 0 18.5096268678454 21.995 0 1 chimp,human,macaque,marmoset, processed_transcript processed_transcript A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000255850.1 ENST00000546214.1 chr12:64202625-64215936 4 559 12746 exonic 0.25 0 0,0,0 0 0,0,0 12.3220035778175 3.44829750509964 160.581 59.5992844364937 4.75670798681939 223.237 304.593917710197 13.5425231445159 852 0 0 chimp,cow,dog,elephant,guinea_pig,horse,human,macaque,marmoset,mouse,orangutan, antisense antisense A549@0,AG04450@0.129409,BJ@0.173974,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0.00453467,NHLF@0.080046,SKNSHRA@0, 0 0 0 0 ENSG00000256571.1 ENST00000541870.1 chr12:64272567-64273254 2 513 172 intronic -3.41 0 0,1,0 0 0,0,0 0 0 0 0 0 0 0 0 0 1 1 chimp,human,macaque,marmoset,orangutan, sense_intronic sense_intronic A549@0.28051,AG04450@0.167538,BJ@0.167289,GM12878@0,H1HESC@0.0563105,HELAS3@0.0889565,HEPG2@0.0556045,HMEC@0.036475,HSMM@0,HUVEC@0.117964,K562@0,MCF7@0,NHEK@0,NHLF@0.0071185,SKNSHRA@0.0338575, 0 0 0 0 ENSG00000255886.1 ENST00000535594.1 chr12:64432342-64491398 3 668 58384 exonic -4.88 0 0,0,1 0 0,0,0 20.5389221556886 13.5073821594958 0 106.425149700599 31.4869142230748 0 131.146706586826 34.0899732803508 0 0 0 cat,chimp,cow,dog,elephant,guinea_pig,horse,human,macaque,marmoset,mouse,opossum,orangutan,panda,rabbit,rat, antisense antisense A549@0.0230735,AG04450@0.007922,BJ@0,GM12878@0,H1HESC@0,HELAS3@0.003483,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0.0079595,K562@0,MCF7@0,NHEK@0,NHLF@0.028924,SKNSHRA@0.0283165, 0 0 0 0 ENSG00000255817.1 ENST00000535806.1 chr12:64502543-64514269 2 388 11336 exonic -7.88 1 0,0,0 0 0,0,0 37.8556701030928 9.4408962597036 0 187.59793814433 22.549841213832 0 209.301546391753 26.7230945659845 0 0 0 cat,chimp,cow,dog,elephant,guinea_pig,horse,human,macaque,marmoset,mouse,orangutan,panda,platypus,rabbit,rat, antisense antisense A549@0.033214,AG04450@0.016536,BJ@0,GM12878@0.006809,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0.017923,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000255629.1 ENST00000536455.1 chr12:64540168-64541637 2 460 1007 exonic 0.40 0 0,1,0 0 0,0,0 126.358695652174 156.103277060576 0 196.460869565217 251.995034756703 0 220.028260869565 281.75769612711 0 0 0 cat,chimp,cow,dog,elephant,horse,human,macaque,marmoset,mouse,opossum,orangutan,panda,platypus,rabbit, antisense antisense A549@0.050008,AG04450@0.0050975,BJ@0.010476,GM12878@0.060635,H1HESC@0.0475645,HELAS3@0.0222925,HEPG2@0,HMEC@0,HSMM@0.008245,HUVEC@0,K562@0.0058995,MCF7@0.0043515,NHEK@0.00552633,NHLF@0.0087915,SKNSHRA@0.0107415, 0 0 0 0 ENSG00000256199.1 ENST00000541885.1 chr12:64900946-64927418 3 709 25759 intergenic 3.90 0 0,0,0 0 0,0,0 3.14809590973202 3.19670794673706 0 63.0620592383639 4.31192981093987 34.314 79.3441466854725 5.65751776078264 34.033 0 1 chimp,human,orangutan, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0.0089545,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0.0031865, 0 0 0 0 ENSG00000256670.1 ENST00000546135.1 chr12:64992858-65003239 2 252 10127 intergenic -3.15 1 1,1,1 0 0,0,0 0 6.08047793028538 0 0 10.3058161350844 6.878 0 13.9236693986373 8.996 0 1 chimp,human,marmoset, antisense antisense A549@0,AG04450@0,BJ@0,GM12878@0.023027,H1HESC@0.0468005,HELAS3@0.018403,HEPG2@0.083882,HMEC@0,HSMM@0,HUVEC@0,K562@0.0483475,MCF7@0.023746,NHEK@0,NHLF@0,SKNSHRA@0.008948, 0 0 0 0 ENSG00000225195.2 ENST00000444853.2 chr12:65022124-65023756 2 279 1351 intronic -14.75 0 0,0,0 0 0,0,0 0 0 0 0 0 12.727 0 0 17.077 0 0 chimp,horse,human,macaque,marmoset,orangutan,panda, processed_transcript processed_transcript A549@0,AG04450@0.01499,BJ@0.016069,GM12878@0.0481085,H1HESC@0,HELAS3@0.0138545,HEPG2@0.0756125,HMEC@0,HSMM@0,HUVEC@0.0664815,K562@0.0241985,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000256314.1 ENST00000545821.1 chr12:65047840-65048799 2 480 477 intronic -0.20 0 0,0,0 0 0,0,0 0 0 0 0 0 0 0 0 0 1 1 chimp,human,macaque,marmoset,orangutan, antisense antisense A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000215159.3 ENST00000434563.3 chr12:65153301-65173098 3 586 19207 intergenic 1.53 0 0,1,0 1 0,0,0 0 5.25974904982558 24.208 0 5.58962878117353 67.473 18.4556313993174 5.95616181600458 76.957 0 0 chimp,guinea_pig,horse,human,macaque,marmoset,orangutan, antisense antisense A549@0.00527,AG04450@0.072558,BJ@0.00418,GM12878@0,H1HESC@0,HELAS3@0.009012,HEPG2@0.0269845,HMEC@0,HSMM@0.0139735,HUVEC@0,K562@0.009173,MCF7@0.0346555,NHEK@0,NHLF@0.003276,SKNSHRA@0.031014, 0 0 0 0 ENSG00000255693.1 ENST00000535058.1 chr12:65277174-65371302 3 3543 90581 intergenic 3.04 1 1,1,1 0 0,0,0 0 6.48906503571389 0 4.2887383573243 17.3891875779689 0 5.05588484335309 19.7716629315198 0 0 0 cat,chimp,elephant,horse,human,macaque,orangutan,panda, lincRNA lincRNA A549@0.001563,AG04450@0,BJ@0,GM12878@0.621881,H1HESC@0,HELAS3@0.0145915,HEPG2@0.0046155,HMEC@0,HSMM@0.006911,HUVEC@0.005137,K562@0,MCF7@0.018903,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000255693.1 ENST00000540024.1 chr12:65277554-65368391 5 552 90277 intergenic -0.03 0 0,1,0 0 0,0,0 0 6.51091640174131 0 0 17.5523444509676 0 0 19.9185174518427 0 0 0 chimp,cow,human,macaque,marmoset,orangutan,pig, lincRNA lincRNA A549@0.001563,AG04450@0,BJ@0,GM12878@0.621881,H1HESC@0,HELAS3@0.0145915,HEPG2@0.0046155,HMEC@0,HSMM@0.006911,HUVEC@0.005137,K562@0,MCF7@0.018903,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000248995.2 ENST00000510459.2 chr12:65314625-65376304 3 444 61231 intergenic -13.58 0 0,0,0 0 0,0,0 0 4.03713805098725 0 0 12.536051999804 0 0 15.9945615782855 0 0 0 cat,chimp,cow,human,macaque,marmoset,orangutan, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0.162523,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000198671.2 ENST00000360528.2 chr12:65411248-65413586 2 598 1738 intergenic -0.90 0 0,0,0 0 0,0,0 0 0 0 0 0 111.929 0 0 103.44 1 1 chimp,human,macaque,marmoset,orangutan, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0.0150635,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 1 96 0 0 ENSG00000250280.2 ENST00000545709.1 chr12:65675437-65680508 2 3455 1614 intronic -4.75 0 0,0,0 0 0,0,0 0 0 0 0 4.69330855018587 13.93 0 5.99380421313507 21.791 1 1 chimp,human,macaque,marmoset,orangutan, sense_intronic sense_intronic A549@0.21125,AG04450@0.357399,BJ@0.548038,GM12878@0.000547,H1HESC@0.003911,HELAS3@0.04815,HEPG2@0.074499,HMEC@0.001289,HSMM@0.016257,HUVEC@0.51168,K562@0,MCF7@0.017162,NHEK@0.0574273,NHLF@0.0252095,SKNSHRA@0.097761, 0 0 0 0 ENSG00000250748.2 ENST00000537250.1 chr12:65860600-66035978 4 686 174686 exonic -0.59 1 0,1,0 1 0,0,0 37.6530612244898 19.6952646462796 0 136.211370262391 39.4583996427876 0 140.740524781341 40.2079273668182 0 0 0 cat,chimp,cow,dog,elephant,guinea_pig,horse,human,macaque,marmoset,mouse,orangutan,panda,pig,rabbit, antisense lincRNA A549@0,AG04450@0.0431985,BJ@0.016483,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0.006972,HMEC@0.021407,HSMM@0,HUVEC@0,K562@0.12526,MCF7@0,NHEK@0.0738473,NHLF@0.050293,SKNSHRA@23.1013, 0 0 0 0 ENSG00000250748.2 ENST00000535315.1 chr12:65893471-66035937 5 739 141719 intergenic 3.93 0 0,0,0 1 0,0,0 24.4668470906631 21.9061099781963 0 85.6684709066306 44.1116505196903 0 91.8024357239513 44.9388649369527 0 0 0 cat,chimp,cow,dog,guinea_pig,horse,human,macaque,marmoset,orangutan,pig,rabbit, antisense lincRNA A549@0,AG04450@0.0431985,BJ@0.016483,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0.006972,HMEC@0.021407,HSMM@0,HUVEC@0,K562@0.12526,MCF7@0,NHEK@0.0738473,NHLF@0.050293,SKNSHRA@23.1013, 0 0 0 0 ENSG00000250748.2 ENST00000540652.1 chr12:65893667-65952469 3 723 58075 intergenic 0 0 0,0,1 0 0,0,0 25.0082987551867 24.2272922944468 0 98.4232365145228 37.8753852776582 3.713 104.087136929461 38.710977184675 4.582 0 0 chimp,cow,dog,guinea_pig,horse,human,macaque,marmoset,orangutan,pig, antisense lincRNA A549@0,AG04450@0.0431985,BJ@0.016483,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0.006972,HMEC@0.021407,HSMM@0,HUVEC@0,K562@0.12526,MCF7@0,NHEK@0.0738473,NHLF@0.050293,SKNSHRA@23.1013, 0 0 0 0 ENSG00000250748.2 ENST00000539653.1 chr12:65893679-66036142 5 740 141715 intergenic -2.42 0 0,1,1 0 0,0,0 24.4337837837838 21.9067282927001 0 81.5310810810811 44.1128956003246 0 87.4783783783784 44.9401333662632 0 0 0 cat,chimp,cow,dog,horse,human,macaque,marmoset,orangutan,panda,pig,rabbit, antisense lincRNA A549@0,AG04450@0.0431985,BJ@0.016483,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0.006972,HMEC@0.021407,HSMM@0,HUVEC@0,K562@0.12526,MCF7@0,NHEK@0.0738473,NHLF@0.050293,SKNSHRA@23.1013, 0 0 0 0 ENSG00000250748.2 ENST00000538294.1 chr12:65917043-65932479 2 518 14916 intergenic -1.99 0 0,0,0 0 0,0,0 79.8880308880309 29.7635425046929 124.845 161.920849420849 45.498927326361 70.897 169.915057915058 46.205081791365 77.695 0 0 cat,chimp,cow,dog,elephant,guinea_pig,horse,human,macaque,marmoset,mouse,opossum,orangutan,panda,pig, antisense lincRNA A549@0,AG04450@0.0431985,BJ@0.016483,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0.006972,HMEC@0.021407,HSMM@0,HUVEC@0,K562@0.12526,MCF7@0,NHEK@0.0738473,NHLF@0.050293,SKNSHRA@23.1013, 0 0 0 0 ENSG00000250748.2 ENST00000511935.2 chr12:65938018-65951091 3 722 12347 intergenic 0.19 1 0,0,0 0 0,0,0 0 9.21624686158581 0 14.9958448753463 25.8957641532356 0 14.5720221606648 25.3920790475419 0 0 0 chimp,horse,human,macaque,marmoset,orangutan, antisense lincRNA A549@0,AG04450@0.0431985,BJ@0.016483,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0.006972,HMEC@0.021407,HSMM@0,HUVEC@0,K562@0.12526,MCF7@0,NHEK@0.0738473,NHLF@0.050293,SKNSHRA@23.1013, 0 0 0 0 ENSG00000250748.2 ENST00000546198.1 chr12:65951914-66035922 5 1067 82933 intergenic -0.42 0 0,0,0 1 0,0,0 0 20.4684745517466 0 0 48.7263091893456 0 0 49.5584387397056 0 0 0 chimp,horse,human,macaque,marmoset,orangutan, antisense lincRNA A549@0,AG04450@0.0431985,BJ@0.016483,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0.006972,HMEC@0.021407,HSMM@0,HUVEC@0,K562@0.12526,MCF7@0,NHEK@0.0738473,NHLF@0.050293,SKNSHRA@23.1013, 0 0 0 0 ENSG00000250748.2 ENST00000537298.1 chr12:65952208-66035940 5 771 82953 intergenic 2.70 0 0,0,0 1 0,0,0 0 20.4635395947103 0 0 48.7145612575796 0 0 49.546490181187 0 1 1 chimp,human,macaque,marmoset,orangutan, antisense lincRNA A549@0,AG04450@0.0431985,BJ@0.016483,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0.006972,HMEC@0.021407,HSMM@0,HUVEC@0,K562@0.12526,MCF7@0,NHEK@0.0738473,NHLF@0.050293,SKNSHRA@23.1013, 0 0 0 0 ENSG00000250748.2 ENST00000544557.1 chr12:65952211-66036152 4 850 83085 intergenic -0.59 0 0,1,0 0 0,0,0 0 20.4310284648252 0 0 48.6371667569357 0 0 49.4677739664199 0 0 0 cat,chimp,dog,human,macaque,marmoset,orangutan,panda,pig, antisense lincRNA A549@0,AG04450@0.0431985,BJ@0.016483,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0.006972,HMEC@0.021407,HSMM@0,HUVEC@0,K562@0.12526,MCF7@0,NHEK@0.0738473,NHLF@0.050293,SKNSHRA@23.1013, 0 0 0 0 ENSG00000255866.1 ENST00000545750.1 chr12:65953371-65954669 2 441 855 intergenic 3.88 0 0,0,0 0 0,0,0 0 0 0 0 1.67719298245614 3.713 0 1.70526315789474 4.582 0 0 chimp,cow,horse,human,macaque,marmoset,orangutan,panda,pig, lincRNA lincRNA A549@0,AG04450@0.0354165,BJ@0.038523,GM12878@0,H1HESC@0,HELAS3@0.0146985,HEPG2@0,HMEC@0.018486,HSMM@0.0247265,HUVEC@0,K562@0.0609855,MCF7@0.004641,NHEK@0,NHLF@0,SKNSHRA@0.035895, 0 0 0 0 ENSG00000256268.1 ENST00000539116.1 chr12:65996649-66000283 2 587 3045 intergenic 0.58 0 1,1,1 1 0,0,0 149.560477001704 20.9825944170772 28.288 151.039182282794 50.0752052545156 82.381 192.195911413969 53.0666666666667 87.062 0 0 cat,chimp,cow,dog,elephant,guinea_pig,horse,human,macaque,marmoset,mouse,orangutan,panda,pig,rabbit,rat, lincRNA lincRNA A549@0.125359,AG04450@1.32647,BJ@0.793324,GM12878@0,H1HESC@0,HELAS3@0.0389445,HEPG2@0.004457,HMEC@1.82403,HSMM@1.16767,HUVEC@0.512473,K562@0.294686,MCF7@0.034484,NHEK@2.55877,NHLF@1.57848,SKNSHRA@0.076456, 0 0 0 0 ENSG00000256268.1 ENST00000541391.1 chr12:65996658-66006777 3 609 9506 intergenic -0.03 1 1,1,1 1 0,0,0 0 24.7101830422891 28.288 41.3809523809524 60.4379339364612 84.313 54.5747126436782 65.3161161371765 89.19 0 0 cat,chimp,cow,elephant,guinea_pig,human,macaque,orangutan,panda,pig,rat, lincRNA lincRNA A549@0.125359,AG04450@1.32647,BJ@0.793324,GM12878@0,H1HESC@0,HELAS3@0.0389445,HEPG2@0.004457,HMEC@1.82403,HSMM@1.16767,HUVEC@0.512473,K562@0.294686,MCF7@0.034484,NHEK@2.55877,NHLF@1.57848,SKNSHRA@0.076456, 0 0 0 0 ENSG00000250748.2 ENST00000355869.2 chr12:66002251-66007009 2 872 3884 intergenic -2.48 0 0,0,0 0 0,0,0 0 19.6042739443872 0 0 73.8362512873327 1.984 0 77.9214727085479 2.008 1 1 chimp,human,macaque,marmoset,orangutan, antisense lincRNA A549@0,AG04450@0.0431985,BJ@0.016483,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0.006972,HMEC@0.021407,HSMM@0,HUVEC@0,K562@0.12526,MCF7@0,NHEK@0.0738473,NHLF@0.050293,SKNSHRA@23.1013, 0 0 0 0 ENSG00000256915.1 ENST00000540875.1 chr12:66038114-66057079 3 542 18419 intergenic 3.57 0 0,0,1 0 0,0,0 0 22.786741951246 0 2.91143911439114 41.7246321732993 0 2.93357933579336 65.6835875997611 0 0 0 chimp,human,macaque,orangutan,rabbit, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0.0079845,HMEC@0.014971,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0.01183,NHLF@0.014067,SKNSHRA@0.1924, 0 0 0 0 ENSG00000256915.1 ENST00000545188.1 chr12:66038177-66041635 2 545 2911 intergenic 3.57 1 1,1,1 0 0,0,0 0 0 0 0 6.98728959120577 0 0 161.23290965304 0 0 0 chimp,horse,human,macaque,marmoset,orangutan,pig, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0.0079845,HMEC@0.014971,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0.01183,NHLF@0.014067,SKNSHRA@0.1924, 0 0 0 0 ENSG00000256083.1 ENST00000544279.1 chr12:66328557-66342259 3 451 13247 intronic -1.17 0 0,0,0 0 0,0,0 29.1618625277162 10.9183211293123 130.858 5.29046563192905 33.9059409677663 215.59 7.01330376940133 40.6680757907451 277.357 0 0 cat,chimp,dog,horse,human,macaque,marmoset,orangutan,panda, antisense antisense A549@0,AG04450@0,BJ@0,GM12878@0.050347,H1HESC@0,HELAS3@0,HEPG2@0.0095845,HMEC@0.009019,HSMM@0,HUVEC@0.110765,K562@0,MCF7@0,NHEK@0.00843533,NHLF@0,SKNSHRA@0.0049975, 0 0 0 0 ENSG00000256259.1 ENST00000536217.1 chr12:66421505-66424846 3 373 2964 intergenic -6.38 0 0,0,0 0 0,0,0 0 0 107.36 22.8766756032172 42.3562753036437 303.715 24.2252010723861 44.9051956815115 302.506 0 0 cat,chimp,cow,dog,elephant,guinea_pig,horse,human,macaque,marmoset,mouse,orangutan,panda,pig,rabbit,rat, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0.815267,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0.016417,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000239335.4 ENST00000510317.2 chr12:66524531-66528229 2 621 3075 exonic 0.33 0 0,1,0 1 0,0,0 0 0 0 10.2705314009662 0.777235772357724 1.673 10.3671497584541 0.775609756097561 1.701 0 0 human, antisense antisense A549@0.282532,AG04450@0.109957,BJ@0.035386,GM12878@0.652103,H1HESC@0.15219,HELAS3@0.780373,HEPG2@0.479942,HMEC@0.18764,HSMM@0.206166,HUVEC@0.0133495,K562@0.666462,MCF7@0.689075,NHEK@0.003127,NHLF@0.053615,SKNSHRA@0.505551, 3 10 0 0 ENSG00000256072.1 ENST00000536412.1 chr12:66645525-66651214 4 519 5164 exonic -0.51 1 0,0,0 0 0,0,0 0 3.40821068938807 0 2.21579961464355 14.3146785437645 0 2.34104046242775 18.4140201394268 0 0 0 chimp,cow,dog,elephant,guinea_pig,horse,human,macaque,marmoset,orangutan,rabbit, antisense antisense A549@0,AG04450@0.015824,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000256248.1 ENST00000535721.1 chr12:67285656-67462942 2 190 177094 intergenic -1.40 0 0,1,0 0 0,0,0 0 6.24316464702361 45.746 148.105263157895 16.9225270195489 120.012 167.5 18.2278902729624 129.062 0 0 chimp,cow,elephant,human,macaque,marmoset,mouse,orangutan,pig, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000257083.1 ENST00000535917.1 chr12:67429288-67490186 5 770 60120 intergenic -0.12 0 0,0,0 0 0,0,0 34.787012987013 8.67919161676647 0 126.275324675325 28.4180472388556 6.975 118.462337662338 31.1800232867598 7.413 0 0 cat,chimp,cow,dog,elephant,guinea_pig,horse,human,macaque,marmoset,mouse,opossum,orangutan,panda,pig,rabbit,rat, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0.00476333,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000257083.1 ENST00000538008.1 chr12:67471406-67490064 4 504 18148 intergenic 1.70 1 0,0,0 0 0,0,0 0 4.81849239585629 0 44.3492063492063 30.1443134229667 9.135 43.6507936507937 32.8329843508927 9.637 0 0 cat,chimp,cow,dog,elephant,guinea_pig,horse,human,macaque,marmoset,mouse,orangutan,panda,pig,rabbit,rat, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0.00476333,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000257083.1 ENST00000502700.2 chr12:67480558-67489334 4 405 8365 intergenic -5.36 1 0,0,0 0 0,0,0 0 1.8 0 55.1901234567901 12.2802151823072 3.833 54.320987654321 13.9153616258219 4.232 0 0 chimp,dog,elephant,human,macaque,marmoset,orangutan,rat, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0.00476333,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000256172.1 ENST00000543387.1 chr12:67834778-67836339 2 739 820 intergenic -3.77 1 0,0,0 0 0,0,0 27.3883626522327 0 10.78 72.8484438430311 21.1634146341463 30.276 67.8335588633288 15.5524390243902 55.897 0 0 chimp,cow,dog,human,macaque,marmoset,orangutan,panda,pig,rabbit,rat, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000203585.3 ENST00000538573.1 chr12:67913609-67942943 3 556 28774 intergenic -3.32 0 0,0,0 0 0,0,0 0 7.48123305762146 0 68.4478417266187 15.256690067422 85.845 69.0755395683453 16.3617154375478 89.512 0 0 chimp,cow,dog,elephant,guinea_pig,human,macaque,marmoset,orangutan,pig,rabbit, lincRNA lincRNA A549@0.002793,AG04450@0.001269,BJ@0.001394,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0.018808,HUVEC@0,K562@0,MCF7@0.0080725,NHEK@0.00303133,NHLF@0.0010925,SKNSHRA@0, 0 0 0 0 ENSG00000203585.3 ENST00000400306.2 chr12:67913862-67960906 3 1763 45277 intergenic 2.33 0 0,1,0 0 0,0,0 0 5.00415221856572 0 1.49120816789563 9.46182388409126 134.758 2.70504821327283 9.97177374826071 150.789 0 0 chimp,cow,dog,horse,human,macaque,marmoset,orangutan,panda, lincRNA lincRNA A549@0.002793,AG04450@0.001269,BJ@0.001394,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0.018808,HUVEC@0,K562@0,MCF7@0.0080725,NHEK@0.00303133,NHLF@0.0010925,SKNSHRA@0, 0 0 0 0 ENSG00000256077.1 ENST00000540761.1 chr12:67964977-67983767 3 379 18407 intergenic -4.99 0 0,0,0 0 0,0,0 0 3.80132558265877 27.242 0 10.3303091215299 1.434 0 11.5153474221764 1.458 0 0 chimp,horse,human,macaque,marmoset,orangutan,pig, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000256077.1 ENST00000537732.1 chr12:67980370-67981086 2 341 373 intergenic 0 0 0,0,0 0 0,0,0 0 0 0 0 0 0 0 0 0 0 0 NA lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000235872.2 ENST00000425371.2 chr12:68052771-68064699 3 774 11150 exonic -2.02 1 0,0,0 0 0,0,0 57.6162790697674 69.150134529148 25.7 57.5968992248062 131.551390134529 28.968 57.1356589147287 122.744304932735 27.991 0 0 cat,chimp,cow,dog,guinea_pig,horse,human,macaque,marmoset,mouse,orangutan,panda,pig,rabbit,rat, antisense antisense A549@0.0517665,AG04450@0.00415,BJ@0.035966,GM12878@0.006835,H1HESC@0,HELAS3@0.0068315,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0.00328567,NHLF@0,SKNSHRA@0.0217575, 0 0 0 0 ENSG00000255970.1 ENST00000542219.1 chr12:68102827-68123255 5 3130 17290 intergenic 6.57 0 0,0,0 0 0,0,0 0 5.10942741469057 0 2.64217252396166 9.01388085598612 0.992 1.44856230031949 10.9816078658184 1.458 0 0 chimp,dog,horse,human,marmoset,orangutan, lincRNA lincRNA A549@0.013438,AG04450@0.0015025,BJ@0.0145,GM12878@0,H1HESC@0.007011,HELAS3@0.0140295,HEPG2@0.060647,HMEC@0,HSMM@0.0229365,HUVEC@0,K562@0.004444,MCF7@0.0026235,NHEK@0,NHLF@0,SKNSHRA@0.004611, 0 0 0 0 ENSG00000255772.1 ENST00000545520.1 chr12:68323015-68326728 3 506 3203 intergenic 4.14 0 0,0,0 0 0,0,0 48.0592885375494 0 161.64 0 1.94567592881673 60.019 0 2.12457071495473 66.799 0 0 chimp,guinea_pig,horse,human,macaque,marmoset,orangutan, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0.0091765,HUVEC@0,K562@0,MCF7@0,NHEK@0.00547467,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000255772.1 ENST00000546170.1 chr12:68323043-68363797 3 441 40309 intergenic 4.14 1 0,0,1 0 0,0,0 30.6349206349206 0.237167878141358 172.448 4.62585034013605 5.22163784762708 60.019 4.80725623582766 6.13423801136223 66.799 0 0 chimp,guinea_pig,human,macaque,marmoset,orangutan, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0.0091765,HUVEC@0,K562@0,MCF7@0,NHEK@0.00547467,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000255733.1 ENST00000538665.1 chr12:68383225-68415107 4 1787 30089 intergenic 1.69 0 1,1,1 0 0,0,0 0 0.889627438598824 0 10.5265808617795 5.71155571803649 28.814 13.1052042529379 7.19807903220446 28.57 0 0 chimp,cow,human,panda, lincRNA processed_transcript A549@0,AG04450@0,BJ@0,GM12878@0.619925,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0.0010895,SKNSHRA@0.002536, 0 0 0 0 ENSG00000255733.1 ENST00000541715.1 chr12:68383236-68414111 5 897 29970 intergenic 1.69 0 0,1,0 0 0,0,0 0 0.89315982649316 0 14.2095875139353 5.73423423423423 30.792 17.1382385730212 7.22665999332666 30.908 0 0 chimp,cow,guinea_pig,horse,human,macaque,marmoset,orangutan,panda,rabbit, lincRNA processed_transcript A549@0,AG04450@0,BJ@0,GM12878@0.619925,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0.0010895,SKNSHRA@0.002536, 0 0 0 0 ENSG00000255733.1 ENST00000536914.1 chr12:68383309-68628466 6 488 244659 encompassing 2.34 1 0,1,0 0 0,0,0 0 3.25237166832203 0 12.0184426229508 6.43125738272453 37.956 12.4897540983607 11.0691860916623 40.475 0 0 chimp,dog,horse,human,macaque,marmoset,orangutan,panda,rabbit, lincRNA processed_transcript A549@0,AG04450@0,BJ@0,GM12878@0.619925,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0.0010895,SKNSHRA@0.002536, 0 0 0 0 ENSG00000251301.2 ENST00000541707.1 chr12:68726668-68729561 2 902 1989 intergenic 3.83 1 0,0,1 0 0,0,0 22.5044345898004 24.8401206636501 19.02 37.6130820399113 29.5897435897436 15.944 37.8292682926829 29.8657616892911 28.713 0 0 cat,chimp,cow,elephant,guinea_pig,horse,human,macaque,marmoset,orangutan,panda,pig, lincRNA lincRNA A549@0,AG04450@0.048092,BJ@0.014383,GM12878@9.80776,H1HESC@0.0073435,HELAS3@0.0238185,HEPG2@0,HMEC@0,HSMM@0.0114005,HUVEC@0.0047095,K562@0.0520035,MCF7@0,NHEK@0.0123497,NHLF@0.0275575,SKNSHRA@0.134356, 0 0 0 0 ENSG00000251301.2 ENST00000539404.1 chr12:68726728-68797580 2 783 70067 intergenic 3.83 1 0,1,1 0 0,0,0 25.9246487867178 8.10016127420897 0 43.3295019157088 14.91677965376 0 43.5785440613027 17.0449569697575 0 0 0 cat,chimp,cow,dog,elephant,guinea_pig,horse,human,macaque,marmoset,orangutan,panda,pig,rabbit, lincRNA lincRNA A549@0,AG04450@0.048092,BJ@0.014383,GM12878@9.80776,H1HESC@0.0073435,HELAS3@0.0238185,HEPG2@0,HMEC@0,HSMM@0.0114005,HUVEC@0.0047095,K562@0.0520035,MCF7@0,NHEK@0.0123497,NHLF@0.0275575,SKNSHRA@0.134356, 0 0 0 0 ENSG00000251301.2 ENST00000546086.1 chr12:68727033-68835996 2 563 108398 intergenic 3.83 0 1,1,1 0 0,0,0 36.0550621669627 5.89592058894076 0 60.2611012433393 14.1977988523774 0 60.607460035524 16.337644605989 0 0 0 cat,chimp,cow,elephant,guinea_pig,horse,human,macaque,marmoset,orangutan,panda,pig,rabbit, lincRNA lincRNA A549@0,AG04450@0.048092,BJ@0.014383,GM12878@9.80776,H1HESC@0.0073435,HELAS3@0.0238185,HEPG2@0,HMEC@0,HSMM@0.0114005,HUVEC@0.0047095,K562@0.0520035,MCF7@0,NHEK@0.0123497,NHLF@0.0275575,SKNSHRA@0.134356, 0 0 0 0 ENSG00000256273.1 ENST00000544089.1 chr12:68738444-68743739 2 474 4819 intergenic -2.02 1 0,0,0 0 0,0,0 0 9.14359825689977 0 30.2721518987342 17.9863042124922 0 32.048523206751 18.9591201494086 0 0 0 cat,dog,horse,human,macaque,marmoset,orangutan,panda, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000251301.2 ENST00000536094.1 chr12:68774215-68777385 2 435 2733 intergenic -1.59 1 0,0,1 0 0,0,0 0 0 0 0 8.00109769484084 0 0 8.74313940724479 0 0 0 NA lincRNA lincRNA A549@0,AG04450@0.048092,BJ@0.014383,GM12878@9.80776,H1HESC@0.0073435,HELAS3@0.0238185,HEPG2@0,HMEC@0,HSMM@0.0114005,HUVEC@0.0047095,K562@0.0520035,MCF7@0,NHEK@0.0123497,NHLF@0.0275575,SKNSHRA@0.134356, 0 0 0 0 ENSG00000251301.2 ENST00000441255.2 chr12:68777100-68845264 4 563 67595 intergenic 4.50 0 0,1,1 0 0,0,0 0 3.12327834899031 20.47 4.67140319715808 12.8917819365338 135.084 8.15985790408526 14.6129447444338 128.743 0 0 chimp,cow,guinea_pig,horse,human,macaque,marmoset,orangutan,rabbit, lincRNA lincRNA A549@0,AG04450@0.048092,BJ@0.014383,GM12878@9.80776,H1HESC@0.0073435,HELAS3@0.0238185,HEPG2@0,HMEC@0,HSMM@0.0114005,HUVEC@0.0047095,K562@0.0520035,MCF7@0,NHEK@0.0123497,NHLF@0.0275575,SKNSHRA@0.134356, 0 0 0 0 ENSG00000251301.2 ENST00000360485.3 chr12:68825626-68845165 4 467 19066 intergenic 0.55 1 0,1,1 0 0,0,0 0 3.38744361690968 20.47 11.7922912205567 16.4319206965279 137.714 15.0192719486081 17.5794608203084 131.879 0 0 chimp,dog,elephant,horse,human,macaque,marmoset,mouse,orangutan,panda,rabbit, lincRNA lincRNA A549@0,AG04450@0.048092,BJ@0.014383,GM12878@9.80776,H1HESC@0.0073435,HELAS3@0.0238185,HEPG2@0,HMEC@0,HSMM@0.0114005,HUVEC@0.0047095,K562@0.0520035,MCF7@0,NHEK@0.0123497,NHLF@0.0275575,SKNSHRA@0.134356, 0 0 0 0 ENSG00000251301.2 ENST00000536112.1 chr12:68825635-68826434 2 415 382 intergenic 0.55 1 0,0,1 0 0,0,0 0 0 0 13.2698795180723 0 53.446 13.9734939759036 0 56.923 0 0 cat,chimp,dog,human,macaque,marmoset,mouse,orangutan,panda,pig, lincRNA lincRNA A549@0,AG04450@0.048092,BJ@0.014383,GM12878@9.80776,H1HESC@0.0073435,HELAS3@0.0238185,HEPG2@0,HMEC@0,HSMM@0.0114005,HUVEC@0.0047095,K562@0.0520035,MCF7@0,NHEK@0.0123497,NHLF@0.0275575,SKNSHRA@0.134356, 0 0 0 0 ENSG00000251301.2 ENST00000542875.1 chr12:68835668-68845443 2 549 9224 intergenic 7.81 0 0,1,0 0 0,0,0 0 3.57816565481353 38.551 40.0601092896175 14.8729401561145 126.943 21.0018214936248 15.3398742411101 133.519 1 1 chimp,human,macaque,marmoset,orangutan, lincRNA lincRNA A549@0,AG04450@0.048092,BJ@0.014383,GM12878@9.80776,H1HESC@0.0073435,HELAS3@0.0238185,HEPG2@0,HMEC@0,HSMM@0.0114005,HUVEC@0.0047095,K562@0.0520035,MCF7@0,NHEK@0.0123497,NHLF@0.0275575,SKNSHRA@0.134356, 0 0 0 0 ENSG00000247363.2 ENST00000500695.2 chr12:69068151-69080639 3 1730 10754 exonic -1.65 1 1,1,1 1 0,0,0 7.12138728323699 0 0 33.1393063583815 2.50511437604612 24.296 90.2300578034682 20.2302399107309 25.668 0 0 chimp,horse,human,macaque,marmoset,opossum,orangutan,panda,pig, lincRNA lincRNA A549@0.403116,AG04450@0.0348835,BJ@0.015099,GM12878@0.979133,H1HESC@0.378167,HELAS3@0.0707945,HEPG2@0.226177,HMEC@0.028332,HSMM@0.010859,HUVEC@0.0248595,K562@0.300009,MCF7@0.169041,NHEK@0.0284307,NHLF@0.0589885,SKNSHRA@0.096073, 0 0 0 0 ENSG00000247363.2 ENST00000502102.2 chr12:69069130-69081535 3 1446 10955 exonic 4.33 1 0,0,1 0 0,0,0 0 0 5.852 18.9737206085754 3.23432222729347 5.943 80.7489626556016 20.8581469648562 6.195 0 1 chimp,human, lincRNA lincRNA A549@0.403116,AG04450@0.0348835,BJ@0.015099,GM12878@0.979133,H1HESC@0.378167,HELAS3@0.0707945,HEPG2@0.226177,HMEC@0.028332,HSMM@0.010859,HUVEC@0.0248595,K562@0.300009,MCF7@0.169041,NHEK@0.0284307,NHLF@0.0589885,SKNSHRA@0.096073, 0 0 0 0 ENSG00000247363.2 ENST00000433116.2 chr12:69079349-69080617 2 548 718 exonic 0 0 0,1,0 1 0,0,0 0 0 0 5.54014598540146 11.1866295264624 26.494 228.591240875912 207.809192200557 27.859 0 0 cat,chimp,cow,dog,elephant,guinea_pig,human,macaque,marmoset,mouse,opossum,orangutan,panda,pig,rabbit,rat, lincRNA lincRNA A549@0.403116,AG04450@0.0348835,BJ@0.015099,GM12878@0.979133,H1HESC@0.378167,HELAS3@0.0707945,HEPG2@0.226177,HMEC@0.028332,HSMM@0.010859,HUVEC@0.0248595,K562@0.300009,MCF7@0.169041,NHEK@0.0284307,NHLF@0.0589885,SKNSHRA@0.096073, 0 0 0 0 ENSG00000256325.1 ENST00000544710.1 chr12:69221898-69222333 2 372 61 intronic -9.86 0 0,0,0 0 0,0,0 0 0 0 0 0 0 0 0 0 0 0 chimp,horse,human,macaque,marmoset,orangutan, antisense antisense A549@0.038682,AG04450@0.022267,BJ@0.0176685,GM12878@0.078797,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0.071867,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0.00401733,NHLF@0,SKNSHRA@0.0190195, 0 0 0 0 ENSG00000247131.1 ENST00000501387.1 chr12:70107413-70132348 4 2534 22395 intergenic -0.70 1 0,0,0 0 0,0,0 0 2.77847733869167 0 5.38279400157853 3.70350524670685 36.659 5.78255722178374 4.9194016521545 49.459 1 1 chimp,human,macaque,marmoset,orangutan, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0.018385,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0.0111455,NHEK@0.00745,NHLF@0,SKNSHRA@0.0258415, 0 0 0 0 ENSG00000247131.1 ENST00000501300.1 chr12:70116102-70132342 3 700 15536 intergenic -8.00 0 0,0,1 0 0,0,0 0 3.24047373841401 0 2.12571428571429 4.13684346035016 36.659 2.38285714285714 4.94065396498455 49.459 0 0 cat,chimp,dog,elephant,human,macaque,orangutan,panda, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0.018385,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0.0111455,NHEK@0.00745,NHLF@0,SKNSHRA@0.0258415, 0 0 0 0 ENSG00000236333.1 ENST00000435350.1 chr12:72647293-72666306 2 2964 16047 intergenic 8.68 1 0,1,0 0 0,0,0 43.3839406207827 33.6125755592946 300.918 37.2864372469636 38.4195176668536 472.707 36.5 44.1703745248333 448.176 0 0 human,macaque,orangutan, lincRNA processed_transcript A549@0.0112265,AG04450@5.29681,BJ@2.74706,GM12878@0.0152385,H1HESC@0.211708,HELAS3@0,HEPG2@0,HMEC@1.00733,HSMM@0.0014945,HUVEC@0,K562@0.0029625,MCF7@0,NHEK@0.050381,NHLF@0.440341,SKNSHRA@0.619363, 0 0 0 0 ENSG00000236333.1 ENST00000426250.1 chr12:72656327-72667264 3 3132 7801 exonic 15.22 1 0,0,1 1 0,0,0 132.275223499361 52.9294962184335 2.997 197.002873563218 63.9442379182156 58.796 285.067049808429 68.4591719010383 67.159 0 0 chimp,cow,guinea_pig,horse,human,macaque,marmoset,mouse,orangutan,panda,pig,rat, lincRNA processed_transcript A549@0.0112265,AG04450@5.29681,BJ@2.74706,GM12878@0.0152385,H1HESC@0.211708,HELAS3@0,HEPG2@0,HMEC@1.00733,HSMM@0.0014945,HUVEC@0,K562@0.0029625,MCF7@0,NHEK@0.050381,NHLF@0.440341,SKNSHRA@0.619363, 0 0 0 0 ENSG00000251138.1 ENST00000515416.1 chr12:74593353-74686402 4 961 92082 intergenic 2.75 1 1,1,1 1 0,0,0 0 6.25133033600486 0 0 8.75508785647575 0 0 11.8124714927999 0 1 1 chimp,human,macaque,marmoset,orangutan, lincRNA lincRNA A549@0.428297,AG04450@0.012271,BJ@0,GM12878@0.0491165,H1HESC@0.043879,HELAS3@0.100141,HEPG2@0.03335,HMEC@0,HSMM@0.002362,HUVEC@0.033207,K562@8.71931,MCF7@0.0421875,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000254451.1 ENST00000534648.1 chr12:75688836-75692274 2 406 3030 intronic -1.18 1 0,0,0 0 0,0,0 0 0 0 0 0 0 0 0 0 0 0 chimp,cow,human,macaque,marmoset,panda,pig, antisense antisense A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0.007284,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000246363.1 ENST00000500381.1 chr12:89404903-89413469 3 2506 6056 intergenic 3.94 0 0,0,0 0 0,0,0 0 0 0 0 1.38754953764861 3.708 2.68794892258579 2.21053500660502 3.756 0 0 chimp,elephant,human,macaque,marmoset,orangutan, lincRNA lincRNA A549@0.014013,AG04450@0.0035735,BJ@0.0077495,GM12878@0,H1HESC@0.010588,HELAS3@0,HEPG2@0,HMEC@0.003264,HSMM@0.0069145,HUVEC@0.020369,K562@0.0123915,MCF7@0.019926,NHEK@0.0186293,NHLF@0.020064,SKNSHRA@0.147956, 0 0 0 0 ENSG00000245904.1 ENST00000501008.1 chr12:92539861-92561333 4 961 20505 intergenic 0.98 0 0,1,0 1 0,0,0 1.67533818938606 7.53294318458912 234.488 12.5785639958377 11.7921970251158 331.658 12.5535900104058 13.7074372104365 330.916 0 0 cat,chimp,dog,horse,human,macaque,marmoset,orangutan,panda, lincRNA lincRNA A549@0.053266,AG04450@0.01245,BJ@0,GM12878@0.144838,H1HESC@0.0256455,HELAS3@0.0023415,HEPG2@0,HMEC@0.002246,HSMM@0.038741,HUVEC@0.0124665,K562@0.0220665,MCF7@0.026772,NHEK@0.0223027,NHLF@0.002129,SKNSHRA@0.0464055, 0 0 0 0 ENSG00000245904.1 ENST00000499685.1 chr12:92539957-92579560 3 1820 37779 intergenic 4.19 0 0,1,0 1 0,0,0 5.51208791208791 6.46478202175812 236.42 7.28406593406593 12.5828370258609 339.081 8.18406593406593 20.8595251330104 338.923 0 0 chimp,cow,dog,horse,human,macaque,marmoset,orangutan,panda, lincRNA lincRNA A549@0.053266,AG04450@0.01245,BJ@0,GM12878@0.144838,H1HESC@0.0256455,HELAS3@0.0023415,HEPG2@0,HMEC@0.002246,HSMM@0.038741,HUVEC@0.0124665,K562@0.0220665,MCF7@0.026772,NHEK@0.0223027,NHLF@0.002129,SKNSHRA@0.0464055, 0 0 0 0 ENSG00000246985.1 ENST00000499137.1 chr12:93936240-93965524 3 3301 25979 intronic 10.90 0 1,1,1 1 0,0,0 0 8.22760691327611 78.792 0 15.2100157819778 107.71 0.863071796425326 15.6032564763848 67.65 0 1 chimp,human,macaque,orangutan, lincRNA lincRNA A549@0.644444,AG04450@0.155918,BJ@2.73067,GM12878@0.068522,H1HESC@0.254895,HELAS3@0.0395495,HEPG2@0.021386,HMEC@0.102982,HSMM@0.099611,HUVEC@0.0530185,K562@1.09952,MCF7@0.305068,NHEK@0.166138,NHLF@1.24474,SKNSHRA@2.54255, 0 0 0 0 ENSG00000246985.1 ENST00000500986.1 chr12:93936240-93965544 5 1650 27646 intronic 8.59 0 1,1,1 1 0,0,0 0 7.7314982275917 78.792 3.61575757575758 14.2928814295016 101.43 4.77818181818182 14.6624104752948 62.35 1 1 chimp,human,macaque,marmoset,orangutan, lincRNA lincRNA A549@0.644444,AG04450@0.155918,BJ@2.73067,GM12878@0.068522,H1HESC@0.254895,HELAS3@0.0395495,HEPG2@0.021386,HMEC@0.102982,HSMM@0.099611,HUVEC@0.0530185,K562@1.09952,MCF7@0.305068,NHEK@0.166138,NHLF@1.24474,SKNSHRA@2.54255, 0 0 0 0 ENSG00000255794.1 ENST00000541282.1 chr12:97858799-97927544 9 2090 66639 intergenic -0.63 0 0,0,0 0 0,0,0 139.759330143541 20.8217560287519 534.74 210.581339712919 32.4254865769294 459.993 211.376076555024 33.5326910667927 460.813 0 0 chimp,dog,elephant,guinea_pig,horse,human,macaque,marmoset,orangutan,panda,pig, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0.054064,H1HESC@7.74602,HELAS3@0.0145195,HEPG2@0.0029545,HMEC@0,HSMM@0.002941,HUVEC@0,K562@0,MCF7@0.0073195,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000255794.1 ENST00000538559.1 chr12:97887676-97958793 7 1360 69745 intergenic 2.35 1 0,1,0 0 0,0,0 141.197058823529 32.1292279016417 87.899 258.836029411765 57.2887805577461 164.599 292.128676470588 59.7359954118574 105.162 0 0 chimp,cow,elephant,guinea_pig,horse,human,macaque,marmoset,mouse,opossum,orangutan,panda,pig,platypus,rat, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0.054064,H1HESC@7.74602,HELAS3@0.0145195,HEPG2@0.0029545,HMEC@0,HSMM@0.002941,HUVEC@0,K562@0,MCF7@0.0073195,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000245017.1 ENST00000501499.1 chr12:98879322-98897633 4 1821 16484 intergenic 1.99 0 1,1,1 0 0,0,0 10.9884678747941 6.80611502062606 35.91 59.8786381109281 5.4247755399175 68.205 64.0851180669961 5.75588449405484 67.562 1 1 chimp,human,macaque,marmoset,orangutan, lincRNA lincRNA A549@0.215667,AG04450@0.027642,BJ@0.002698,GM12878@0.163438,H1HESC@0.252781,HELAS3@0.217732,HEPG2@0.0971435,HMEC@0.008975,HSMM@0.026904,HUVEC@0.0278895,K562@0.135333,MCF7@0.116243,NHEK@0.029825,NHLF@0.0138635,SKNSHRA@0.149535, 0 0 0 0 ENSG00000197041.4 ENST00000355965.4 chr12:104424522-104426026 2 1387 115 intronic 2.69 0 0,0,1 0 0,0,0 33.352559480894 0 0 48.7772170151406 65.4695652173913 20.001 291.612833453497 563.078260869565 27.008 0 0 chimp,cow,dog,elephant,guinea_pig,horse,human,macaque,marmoset,mouse,orangutan,panda,pig,rabbit,rat, lincRNA lincRNA A549@0.044913,AG04450@0.243719,BJ@0.26056,GM12878@0.049794,H1HESC@0.177407,HELAS3@0.121327,HEPG2@0.161207,HMEC@0.015829,HSMM@0.105151,HUVEC@0.128441,K562@0.030885,MCF7@0.003491,NHEK@0.0752083,NHLF@0.0925995,SKNSHRA@0.196615, 0 0 0 0 ENSG00000245335.1 ENST00000502037.1 chr12:104852873-104862733 2 4227 5631 intronic -1.72 0 0,0,1 0 0,0,0 11.8509581263307 0 0 20.4076176957653 7.53578405256615 0 19.3203217411876 8.56029124489433 0 1 1 chimp,human,macaque,marmoset,orangutan, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0.0146625,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0.0017695,HUVEC@0.001263,K562@0.0024275,MCF7@0.0019015,NHEK@0,NHLF@0,SKNSHRA@0.0006575, 0 0 0 0 ENSG00000235162.2 ENST00000443585.1 chr12:105724414-105765296 6 1360 39512 intergenic 9.27 1 1,1,1 1 0,0,1 44.0323529411765 4.69614294391577 26.051 84.1580882352941 5.21894614294392 35.512 243.056617647059 6.12398764932173 38.036 0 0 cat,chimp,cow,dog,elephant,horse,human,macaque,marmoset,mouse,opossum,orangutan,panda,platypus,rabbit,rat, lincRNA processed_transcript A549@67.8029,AG04450@75.0823,BJ@160.517,GM12878@55.1646,H1HESC@7.31896,HELAS3@17.2174,HEPG2@5.51746,HMEC@45.5736,HSMM@38.8881,HUVEC@10.4854,K562@0.184346,MCF7@18.1999,NHEK@45.0422,NHLF@108.23,SKNSHRA@21.3774, 0 0 0 0 ENSG00000247213.1 ENST00000502160.1 chr12:108827907-108909764 20 3109 78710 intronic 0.54 1 0,0,0 0 0,0,0 0 12.6104179900902 0 4.47410743004181 8.63965188667259 16.664 5.31392730781602 10.2854275187397 21.301 0 1 chimp,human,marmoset,orangutan, lincRNA lincRNA A549@0.0075905,AG04450@0.0007165,BJ@0,GM12878@0.011954,H1HESC@0.0146225,HELAS3@0.00733,HEPG2@0.0017435,HMEC@0,HSMM@0,HUVEC@0.002331,K562@0.0059895,MCF7@0.0241535,NHEK@0.000816,NHLF@0,SKNSHRA@0.0594425, 0 0 0 0 ENSG00000256262.1 ENST00000478808.2 chr12:109490155-109491757 2 654 946 exonic 19.38 0 1,1,1 0 0,0,0 24.954128440367 7.76321353065539 0 39.2507645259939 15.1384778012685 0 38.1437308868502 15.1744186046512 0 0 0 chimp,dog,guinea_pig,horse,human,macaque,marmoset,orangutan,panda,pig, antisense antisense A549@0.044224,AG04450@0.0782155,BJ@0.059151,GM12878@2.96332,H1HESC@0.003772,HELAS3@0.027943,HEPG2@0.013129,HMEC@0.037451,HSMM@0.0208495,HUVEC@0.0155545,K562@0.007488,MCF7@0.0061295,NHEK@0.0236087,NHLF@0.165013,SKNSHRA@0.10994, 0 0 0 0 ENSG00000256486.1 ENST00000542331.1 chr12:109541772-109545809 2 558 3477 intronic -8.91 0 0,0,1 0 0,0,0 0 0 63.273 0 0 66.007 0 0 77.666 1 1 chimp,human,macaque,marmoset,orangutan, processed_transcript processed_transcript A549@0.167648,AG04450@0.013101,BJ@0.0377325,GM12878@0.136289,H1HESC@0.363216,HELAS3@0.168418,HEPG2@0.102987,HMEC@0.021445,HSMM@0.01256,HUVEC@0.178949,K562@0.108034,MCF7@0.288116,NHEK@0.0170987,NHLF@0.0130975,SKNSHRA@0.042764, 1 96 0 0 ENSG00000256139.1 ENST00000541704.1 chr12:109549023-109551183 2 537 1621 intergenic 4.72 0 0,1,0 1 0,0,0 0 0 0 0 0 4.905 0 0 4.995 1 1 chimp,human,macaque,marmoset,orangutan, processed_transcript processed_transcript A549@0.426049,AG04450@0.191547,BJ@0.098309,GM12878@0.0048215,H1HESC@0.016128,HELAS3@0.473137,HEPG2@0.393235,HMEC@0.027895,HSMM@0.01738,HUVEC@0.0168375,K562@0.016382,MCF7@0,NHEK@0.07327,NHLF@0.0113695,SKNSHRA@0.679688, 0 0 0 0 ENSG00000256139.1 ENST00000545731.1 chr12:109551149-109563369 2 374 11844 intronic -0.13 0 0,0,0 0 0,0,0 0 4.1063829787234 0 19.1711229946524 2.96335697399527 0 20.1336898395722 2.88171225937183 0 0 0 human, processed_transcript processed_transcript A549@0.426049,AG04450@0.191547,BJ@0.098309,GM12878@0.0048215,H1HESC@0.016128,HELAS3@0.473137,HEPG2@0.393235,HMEC@0.027895,HSMM@0.01738,HUVEC@0.0168375,K562@0.016382,MCF7@0,NHEK@0.07327,NHLF@0.0113695,SKNSHRA@0.679688, 0 0 0 0 ENSG00000256560.1 ENST00000538041.1 chr12:109791888-109797293 3 713 4688 intergenic 3.25 0 0,1,0 0 0,0,0 173.158485273492 19.1096416382253 330.6 118.001402524544 10.9782423208191 262.756 146.143057503506 15.1345989761092 304.387 0 0 chimp,dog,human,macaque,marmoset,orangutan,panda, antisense lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000255655.1 ENST00000539987.1 chr12:109883215-109885302 2 601 1484 exonic 0 0 0,1,1 0 0,0,0 49.8668885191348 8.07816711590296 0 57.1014975041597 10.1212938005391 0 62.6638935108153 11.4770889487871 0 0 0 chimp,dog,elephant,guinea_pig,horse,human,macaque,marmoset,orangutan, antisense antisense A549@0.288406,AG04450@0.320933,BJ@0.612502,GM12878@0.275033,H1HESC@0.355494,HELAS3@0.240992,HEPG2@0.114258,HMEC@0.033952,HSMM@0.296567,HUVEC@0.26608,K562@0.229359,MCF7@0.60736,NHEK@0.171023,NHLF@1.205,SKNSHRA@0.429327, 0 0 0 0 ENSG00000255650.1 ENST00000541723.1 chr12:110171971-110211313 3 868 38470 intronic 6.66 0 0,1,0 1 0,0,0 10.7384792626728 46.2455939693267 0 2.11981566820277 50.0476475175461 0 2.31336405529954 54.4708344164284 0 1 1 chimp,human,macaque,marmoset,orangutan, lincRNA processed_transcript A549@0.02177,AG04450@0,BJ@0,GM12878@0.0042695,H1HESC@0.0109695,HELAS3@0.25962,HEPG2@0.104919,HMEC@0.073298,HSMM@0,HUVEC@0,K562@0,MCF7@0.003745,NHEK@0.0943103,NHLF@0.003554,SKNSHRA@0, 0 0 0 0 ENSG00000255650.1 ENST00000541460.1 chr12:110172128-110211289 4 747 38408 intronic 6.66 0 0,1,0 1 0,0,0 12.4779116465863 46.3202457821287 0 2.46318607764391 50.1284367840033 0 2.68808567603748 54.5587637992085 0 1 1 chimp,human,macaque,marmoset,orangutan, lincRNA antisense A549@0.02177,AG04450@0,BJ@0,GM12878@0.0042695,H1HESC@0.0109695,HELAS3@0.25962,HEPG2@0.104919,HMEC@0.073298,HSMM@0,HUVEC@0,K562@0,MCF7@0.003745,NHEK@0.0943103,NHLF@0.003554,SKNSHRA@0, 0 0 0 0 ENSG00000255650.1 ENST00000536474.1 chr12:110172217-110173762 2 547 996 intronic 6.66 0 0,0,0 0 0,0,0 17.0402193784278 0 0 3.36380255941499 0 10.531 3.6709323583181 0 13.526 0 0 chimp,horse,human,macaque,orangutan,pig, lincRNA antisense A549@0.02177,AG04450@0,BJ@0,GM12878@0.0042695,H1HESC@0.0109695,HELAS3@0.25962,HEPG2@0.104919,HMEC@0.073298,HSMM@0,HUVEC@0,K562@0,MCF7@0.003745,NHEK@0.0943103,NHLF@0.003554,SKNSHRA@0, 0 0 0 0 ENSG00000249094.2 ENST00000446473.2 chr12:110318481-110326272 2 726 7063 intergenic -2.69 0 0,1,0 0 0,0,0 0 2.69290669687102 45.264 4.18181818181818 3.56477417527963 151.204 3.68181818181818 55.6470338383123 139.43 0 0 cat,chimp,human,macaque,marmoset, antisense lincRNA A549@0.0097575,AG04450@0,BJ@0.004445,GM12878@0,H1HESC@0,HELAS3@0.0619745,HEPG2@0.0192005,HMEC@0.005624,HSMM@0.0056525,HUVEC@0,K562@0,MCF7@0.0028245,NHEK@0.007254,NHLF@0.005301,SKNSHRA@0.0322675, 0 0 0 0 ENSG00000234608.1 ENST00000443596.1 chr12:112277571-112279706 2 928 1205 intergenic -2.02 1 1,1,1 1 0,0,0 0 12.2323651452282 58.35 0 3.27385892116183 125.681 6.80818965517241 3.38589211618257 127.914 0 0 chimp,human,macaque,marmoset, processed_transcript processed_transcript A549@17.8978,AG04450@4.59021,BJ@4.03937,GM12878@8.00666,H1HESC@7.20436,HELAS3@11.4421,HEPG2@4.14684,HMEC@2.96682,HSMM@2.77928,HUVEC@2.7635,K562@13.6332,MCF7@6.07094,NHEK@3.55985,NHLF@2.36531,SKNSHRA@4.69871, 0 0 0 0 ENSG00000234608.1 ENST00000456429.1 chr12:112277572-112280706 3 1954 1176 exonic 7.93 1 0,0,1 0 0,0,0 29.8618219037871 12.5340136054422 0 64.3198567041965 3.35459183673469 1.984 65.4626407369498 8.84183673469388 2.072 0 0 cat,chimp,cow,human,macaque,pig, processed_transcript processed_transcript A549@17.8978,AG04450@4.59021,BJ@4.03937,GM12878@8.00666,H1HESC@7.20436,HELAS3@11.4421,HEPG2@4.14684,HMEC@2.96682,HSMM@2.77928,HUVEC@2.7635,K562@13.6332,MCF7@6.07094,NHEK@3.55985,NHLF@2.36531,SKNSHRA@4.69871, 0 0 0 0 ENSG00000234608.1 ENST00000428207.1 chr12:112277573-112280706 2 2283 848 exonic 7.93 1 0,0,1 0 0,0,0 25.5584756898817 17.3820754716981 0 55.0508103372755 4.65212264150943 1.984 58.796320630749 4.81132075471698 2.072 0 0 chimp,human,macaque, processed_transcript processed_transcript A549@17.8978,AG04450@4.59021,BJ@4.03937,GM12878@8.00666,H1HESC@7.20436,HELAS3@11.4421,HEPG2@4.14684,HMEC@2.96682,HSMM@2.77928,HUVEC@2.7635,K562@13.6332,MCF7@6.07094,NHEK@3.55985,NHLF@2.36531,SKNSHRA@4.69871, 0 0 0 0 ENSG00000234608.1 ENST00000442119.1 chr12:112277574-112279710 3 599 1533 intergenic 5.29 1 1,1,1 1 0,0,0 0 9.61513372472277 58.35 0 2.573385518591 125.681 0 6.78277886497065 127.914 0 0 chimp,human,macaque, processed_transcript processed_transcript A549@17.8978,AG04450@4.59021,BJ@4.03937,GM12878@8.00666,H1HESC@7.20436,HELAS3@11.4421,HEPG2@4.14684,HMEC@2.96682,HSMM@2.77928,HUVEC@2.7635,K562@13.6332,MCF7@6.07094,NHEK@3.55985,NHLF@2.36531,SKNSHRA@4.69871, 0 0 0 0 ENSG00000249550.1 ENST00000510694.1 chr12:114188835-114211444 4 1447 21156 intergenic 8.44 0 0,1,0 0 0,0,0 0 22.4775477405937 0 0 24.6170826243146 0 0 35.0568160332766 0 0 1 chimp,human,macaque,orangutan, lincRNA lincRNA A549@1.02375,AG04450@0.006179,BJ@0.003898,GM12878@0.306999,H1HESC@0.0482965,HELAS3@0.330342,HEPG2@0.421743,HMEC@0,HSMM@0.007396,HUVEC@0.0281735,K562@0.665475,MCF7@0.012753,NHEK@0,NHLF@0,SKNSHRA@0.321752, 0 0 0 0 ENSG00000255399.1 ENST00000531202.1 chr12:114845996-114847817 3 819 998 exonic 5.04 0 0,1,0 1 0,0,0 12.4639804639805 17.8036072144289 146.2 17.1721611721612 24.3957915831663 193.737 16.7643467643468 23.3226452905812 181.339 0 0 cat,chimp,dog,elephant,horse,human,macaque,marmoset,orangutan,panda,pig, antisense antisense A549@0,AG04450@6.69351,BJ@9.23462,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0.0005685,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@6.13058,SKNSHRA@0.000627, 0 0 0 0 ENSG00000255399.1 ENST00000532697.1 chr12:114846001-114847419 2 959 457 exonic 5.04 0 0,1,0 1 0,0,0 8.2252346193952 38.8796498905908 148.52 24.0031282586027 33.6805251641138 193.737 22.5505735140772 33.6542669584245 181.339 0 0 cat,chimp,cow,elephant,horse,human,macaque,marmoset,orangutan,panda,pig, antisense retained_intron A549@0,AG04450@6.69351,BJ@9.23462,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0.0005685,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@6.13058,SKNSHRA@0.000627, 0 0 0 0 ENSG00000255399.1 ENST00000531024.1 chr12:114846010-114847804 3 763 1027 exonic 4.91 0 0,1,0 1 0,0,0 4.86500655307995 17.300876338851 152.696 18.43250327654 23.7069133398247 193.737 17.9947575360419 22.6640701071081 181.339 0 0 cat,chimp,dog,elephant,horse,human,macaque,marmoset,orangutan,panda,pig, antisense antisense A549@0,AG04450@6.69351,BJ@9.23462,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0.0005685,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@6.13058,SKNSHRA@0.000627, 0 0 0 0 ENSG00000255399.1 ENST00000528549.1 chr12:114846559-114850636 2 3618 457 intergenic 5.04 0 0,1,0 0 0,1,0 27.0917634051962 38.8796498905908 115.536 47.8391376451078 33.6805251641138 163.756 43.8253178551686 33.6542669584245 166.631 1 1 chimp,human,macaque,marmoset,orangutan, antisense antisense A549@0,AG04450@6.69351,BJ@9.23462,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0.0005685,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@6.13058,SKNSHRA@0.000627, 0 0 0 0 ENSG00000196668.3 ENST00000480237.1 chr12:116971227-116973326 2 1595 502 intergenic 0.07 0 1,1,1 1 0,1,0 223.245141065831 327.406374501992 0 174.295297805643 52.2649402390438 5.476 181.31724137931 52.9442231075697 5.51 0 0 chimp,cow,elephant,horse,human,macaque,marmoset,orangutan,panda,pig, lincRNA retained_intron A549@2.1436,AG04450@0.078864,BJ@0.0463495,GM12878@1.0178,H1HESC@1.44388,HELAS3@0.123368,HEPG2@0.0119565,HMEC@1.4797,HSMM@0.0162145,HUVEC@0.033497,K562@0.766141,MCF7@0.313856,NHEK@0.677214,NHLF@0.087551,SKNSHRA@1.39214, 0 0 0 0 ENSG00000196668.3 ENST00000470091.1 chr12:116971240-116974318 3 432 2642 intergenic -3.98 1 1,1,1 1 0,1,0 46 189.463285389856 0 18.1805555555556 112.040121120363 5.476 19.7083333333333 116.153671461014 5.51 0 1 human,macaque,marmoset,orangutan, lincRNA processed_transcript A549@2.1436,AG04450@0.078864,BJ@0.0463495,GM12878@1.0178,H1HESC@1.44388,HELAS3@0.123368,HEPG2@0.0119565,HMEC@1.4797,HSMM@0.0162145,HUVEC@0.033497,K562@0.766141,MCF7@0.313856,NHEK@0.677214,NHLF@0.087551,SKNSHRA@1.39214, 0 0 0 0 ENSG00000196668.3 ENST00000489452.1 chr12:116971273-116972164 2 541 348 intergenic -3.98 0 0,1,1 1 0,1,0 229.353049907579 414 0 101.170055452865 51.75 5.476 104.441774491682 50.7959770114943 5.51 0 0 cow,dog,elephant,horse,human,macaque,marmoset,panda,pig, lincRNA processed_transcript A549@2.1436,AG04450@0.078864,BJ@0.0463495,GM12878@1.0178,H1HESC@1.44388,HELAS3@0.123368,HEPG2@0.0119565,HMEC@1.4797,HSMM@0.0162145,HUVEC@0.033497,K562@0.766141,MCF7@0.313856,NHEK@0.677214,NHLF@0.087551,SKNSHRA@1.39214, 0 0 0 0 ENSG00000247019.1 ENST00000502085.1 chr12:116971978-116973135 2 1092 63 intergenic -0.09 0 0,1,0 0 0,0,0 265.102564102564 326.539682539683 0 248.155677655678 58.0952380952381 0 258.078754578755 60.3809523809524 0 0 0 cat,chimp,cow,dog,elephant,horse,human,macaque,marmoset,orangutan,panda,pig,rat, lincRNA lincRNA A549@0.005675,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000196668.3 ENST00000477702.1 chr12:116973869-116974323 2 312 140 intergenic 0 1 0,0,1 0 0,0,0 0 0 0 0 0 0 0 0 0 1 1 chimp,human,macaque,marmoset,orangutan, lincRNA retained_intron A549@2.1436,AG04450@0.078864,BJ@0.0463495,GM12878@1.0178,H1HESC@1.44388,HELAS3@0.123368,HEPG2@0.0119565,HMEC@1.4797,HSMM@0.0162145,HUVEC@0.033497,K562@0.766141,MCF7@0.313856,NHEK@0.677214,NHLF@0.087551,SKNSHRA@1.39214, 0 0 0 0 ENSG00000255686.1 ENST00000540161.1 chr12:117890817-117894791 2 560 3412 exonic 1.08 0 0,1,1 0 0,0,0 186.257142857143 8.53458382180539 0 232.942857142857 17.8388042203986 1.35 275.732142857143 22.3437866354045 1.36 0 0 cat,chimp,cow,dog,elephant,guinea_pig,horse,human,macaque,marmoset,mouse,opossum,orangutan,panda,pig,rabbit,rat, antisense antisense A549@0,AG04450@0,BJ@0,GM12878@0.0272415,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000256071.1 ENST00000544667.1 chr12:118327259-118328813 2 546 1006 intronic -4.22 0 0,0,0 0 0,0,0 72.2142857142857 6.02982107355865 0 156.901098901099 3.37574552683897 9.703 163.271062271062 3.51888667992048 10.423 0 0 chimp,cow,dog,elephant,horse,human,macaque,orangutan,panda,pig,rabbit,rat, antisense antisense A549@0,AG04450@0,BJ@0,GM12878@0.333908,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000255714.1 ENST00000543558.1 chr12:119083120-119086529 3 533 2872 intergenic -6.93 0 0,0,0 0 0,0,0 48.7992495309568 7.58321727019499 136.68 61.4727954971857 18.8133704735376 99.409 52.4821763602251 21.3318245125348 108.391 0 0 cat,chimp,cow,horse,human,macaque,mouse,opossum,orangutan,panda, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000256750.1 ENST00000542577.1 chr12:119196559-119199484 3 457 2464 intergenic 1.87 0 0,0,0 0 0,0,0 74.074398249453 30.5795454545455 0 51.8533916849015 11.2836850649351 0 51.6345733041576 11.2305194805195 0 0 0 chimp,dog,elephant,horse,human,macaque,marmoset,orangutan,panda,pig,rabbit, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000256750.1 ENST00000536572.1 chr12:119196610-119199462 2 291 2559 intergenic 0 0 0,0,0 0 0,0,0 0 42.9574052364205 0 0 20.4384525205158 0 0 20.3454474404064 0 0 0 chimp,human,macaque,marmoset,orangutan,panda, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000255618.1 ENST00000545276.1 chr12:119210837-119212942 4 676 1423 intergenic 0.01 0 0,0,1 0 0,0,0 0 0 0 5.8905325443787 27.4933239634575 2.151 6.67455621301775 30.4982431482783 5.661 1 1 chimp,human,macaque,marmoset,orangutan, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0.455854,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0.176685, 0 0 0 0 ENSG00000255814.1 ENST00000538783.1 chr12:119256609-119271341 3 447 14281 intergenic -11.71 1 0,0,0 0 0,0,0 0 17.2051677053428 0 57.7091722595078 17.6821651144878 0 58.572706935123 19.2090189762622 0 0 0 chimp,human,marmoset,orangutan,pig,rabbit, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000256149.1 ENST00000544515.1 chr12:119287159-119346735 5 565 59003 intergenic 3.98 0 0,0,1 0 0,0,0 14.4424778761062 15.1026727454536 105.928 0 12.6392386827788 106.707 0 12.9715099232242 99.521 0 0 cat,chimp,cow,dog,horse,human,macaque,marmoset,orangutan,pig,rabbit, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000256031.1 ENST00000534886.1 chr12:119438581-119439647 3 452 610 intronic 4.17 1 0,1,0 0 0,0,0 0 0 0 0 0 20.596 0 0 21.354 0 0 chimp,elephant,human,macaque,marmoset,orangutan, sense_intronic sense_intronic A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0.0105695,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0.007766, 0 0 0 0 ENSG00000257095.1 ENST00000537730.1 chr12:119468844-119554766 4 603 85313 exonic 0.22 0 0,1,0 0 0,0,0 18.1492537313433 14.3544125748714 19.494 24.8888888888889 17.5500802925697 26.264 19.865671641791 19.0333712329891 28.566 0 0 cat,chimp,cow,dog,horse,human,macaque,marmoset,orangutan,panda,rabbit, antisense antisense A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0.0034175,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000256884.1 ENST00000538405.1 chr12:119611870-119614289 2 575 1842 intergenic 2.09 1 0,1,1 0 0,0,0 0 0 25.33 0 0.999457111834962 20.295 0 2.43648208469055 21.806 1 1 chimp,human,macaque,marmoset,orangutan, antisense non_coding A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0.0071905,HELAS3@0.318383,HEPG2@0.0283645,HMEC@0,HSMM@0.021396,HUVEC@0.0181715,K562@0.00928,MCF7@0.010453,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000256609.1 ENST00000535921.1 chr12:119619853-119621064 2 539 670 intronic 0 0 0,0,1 0 0,0,0 0 0 0 11.3896103896104 0 4.5 11.8274582560297 0 4.56 0 1 chimp,human,macaque, antisense antisense A549@0,AG04450@0.0109445,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0.0529617,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000256311.1 ENST00000536009.1 chr12:119663639-119696822 5 496 32679 intergenic -2.63 0 0,0,0 0 0,0,0 0 10.509011903669 0 4.8991935483871 11.8914899476728 0 5.15322580645161 12.186541815845 0 0 0 chimp,horse,human,macaque,marmoset,orangutan, antisense non_coding A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000248636.2 ENST00000537366.1 chr12:119825792-120105884 4 689 279397 exonic -4.40 0 1,1,1 1 0,0,0 0 11.2575296084067 63.384 8.18867924528302 10.5646123616216 129.412 8.37880986937591 12.5507145746017 128.971 0 0 chimp,cow,elephant,horse,human,macaque,marmoset,orangutan,pig, lincRNA lincRNA A549@0,AG04450@0.0079265,BJ@0.0035525,GM12878@0.013543,H1HESC@0,HELAS3@0,HEPG2@0.004304,HMEC@0,HSMM@0.231942,HUVEC@0.0370015,K562@0.0046905,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0.100467, 0 0 0 0 ENSG00000248636.2 ENST00000535511.1 chr12:119825796-120032045 3 492 205753 intronic -3.43 0 0,0,1 0 0,0,0 0 13.0478243330595 22.4 0 12.2365409009832 10.184 0.49390243902439 14.578961181611 15.241 1 1 chimp,human,macaque,marmoset,orangutan, lincRNA lincRNA A549@0,AG04450@0.0079265,BJ@0.0035525,GM12878@0.013543,H1HESC@0,HELAS3@0,HEPG2@0.004304,HMEC@0,HSMM@0.231942,HUVEC@0.0370015,K562@0.0046905,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0.100467, 0 0 0 0 ENSG00000248636.2 ENST00000509470.2 chr12:119825796-120032306 3 692 205814 intronic -2.82 0 0,0,1 0 0,0,0 0 13.0439571652074 31.08 0 12.2329141846522 14.012 0 14.5770015645194 18.781 0 0 cat,chimp,dog,elephant,horse,human,marmoset,orangutan,pig, lincRNA lincRNA A549@0,AG04450@0.0079265,BJ@0.0035525,GM12878@0.013543,H1HESC@0,HELAS3@0,HEPG2@0.004304,HMEC@0,HSMM@0.231942,HUVEC@0.0370015,K562@0.0046905,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0.100467, 0 0 0 0 ENSG00000255857.1 ENST00000542265.1 chr12:120639094-120650722 4 850 10772 exonic 9.52 0 0,1,0 1 0,0,0 88.0941176470588 17.2360750092833 49.815 162.027058823529 29.1844597103602 89.082 148.264705882353 82.0151318232455 89.05 0 0 chimp,dog,horse,human,macaque,marmoset,orangutan, antisense antisense A549@4.04534,AG04450@0.966236,BJ@0.934351,GM12878@2.40109,H1HESC@6.80589,HELAS3@4.63166,HEPG2@3.13435,HMEC@0.868388,HSMM@0.685499,HUVEC@1.4665,K562@3.6469,MCF7@2.17718,NHEK@0.42353,NHLF@1.16305,SKNSHRA@1.27167, 0 0 0 0 ENSG00000255857.1 ENST00000542314.1 chr12:120639130-120648322 4 703 8483 exonic 1.65 1 1,1,1 1 0,0,0 32.6600284495021 0 49.815 62.5177809388336 5.34374631616174 89.082 63.5689900426743 74.1085700813392 89.05 0 0 chimp,dog,horse,human,macaque,marmoset,orangutan,panda, antisense antisense A549@4.04534,AG04450@0.966236,BJ@0.934351,GM12878@2.40109,H1HESC@6.80589,HELAS3@4.63166,HEPG2@3.13435,HMEC@0.868388,HSMM@0.685499,HUVEC@1.4665,K562@3.6469,MCF7@2.17718,NHEK@0.42353,NHLF@1.16305,SKNSHRA@1.27167, 0 0 0 0 ENSG00000255857.1 ENST00000538804.1 chr12:120639159-120647910 3 505 8242 intergenic 0 0 0,1,1 1 0,0,0 0 0 49.815 0 5.5 93.882 0 76.2755399174957 93.914 0 0 chimp,horse,human,macaque,orangutan, antisense antisense A549@4.04534,AG04450@0.966236,BJ@0.934351,GM12878@2.40109,H1HESC@6.80589,HELAS3@4.63166,HEPG2@3.13435,HMEC@0.868388,HSMM@0.685499,HUVEC@1.4665,K562@3.6469,MCF7@2.17718,NHEK@0.42353,NHLF@1.16305,SKNSHRA@1.27167, 0 0 0 0 ENSG00000255857.1 ENST00000539446.1 chr12:120639159-120649315 4 823 9327 exonic -0.56 0 1,1,1 1 0,0,0 63.0255164034022 2.46167041921304 49.815 83.6148238153098 11.6200278760588 93.882 69.9295261239368 74.3873700010721 93.914 0 0 cat,chimp,cow,guinea_pig,horse,human,macaque,marmoset,orangutan,panda,rabbit, antisense antisense A549@4.04534,AG04450@0.966236,BJ@0.934351,GM12878@2.40109,H1HESC@6.80589,HELAS3@4.63166,HEPG2@3.13435,HMEC@0.868388,HSMM@0.685499,HUVEC@1.4665,K562@3.6469,MCF7@2.17718,NHEK@0.42353,NHLF@1.16305,SKNSHRA@1.27167, 0 0 0 0 ENSG00000255857.1 ENST00000535200.1 chr12:120639174-120650941 5 1165 10594 exonic 9.52 0 0,1,0 1 0,0,0 71.9742489270386 16.6789692278648 49.815 120.622317596567 28.9572399471399 93.882 108.388841201717 82.9106097791203 93.914 1 1 chimp,human,macaque,marmoset,orangutan, antisense antisense A549@4.04534,AG04450@0.966236,BJ@0.934351,GM12878@2.40109,H1HESC@6.80589,HELAS3@4.63166,HEPG2@3.13435,HMEC@0.868388,HSMM@0.685499,HUVEC@1.4665,K562@3.6469,MCF7@2.17718,NHEK@0.42353,NHLF@1.16305,SKNSHRA@1.27167, 0 0 0 0 ENSG00000256695.1 ENST00000536933.1 chr12:120827349-120833797 4 361 6081 intergenic 5.78 0 0,1,0 1 0,0,0 0 11.4579838842296 176.058 14.0858725761773 12.5203091596777 195.069 17.393351800554 11.5994079921066 187.103 0 0 cat,chimp,horse,human,macaque,orangutan, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0.029843,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000248008.1 ENST00000500741.1 chr12:120925114-120933749 3 3575 5056 intronic 5.84 0 0,1,0 1 0,0,0 7.1627972027972 10.9905063291139 201.268 19.0662937062937 10.9956487341772 246.003 19.5241958041958 14.4351265822785 248.566 0 0 chimp,human,macaque,marmoset,orangutan,pig, lincRNA lincRNA A549@5.11932,AG04450@1.19871,BJ@1.34645,GM12878@1.1234,H1HESC@1.71287,HELAS3@4.10534,HEPG2@1.23979,HMEC@2.37505,HSMM@1.67362,HUVEC@1.04936,K562@1.38524,MCF7@1.8242,NHEK@2.47668,NHLF@1.43735,SKNSHRA@2.04649, 0 0 0 0 ENSG00000256008.1 ENST00000544339.1 chr12:121067908-121077956 2 494 9552 intergenic -3.98 1 0,1,0 0 0,0,0 488.538461538462 17.6632118927973 103.74 452.188259109312 25.0519262981575 315.23 346.429149797571 27.3579355108878 327.51 0 0 cat,chimp,cow,dog,elephant,guinea_pig,horse,human,macaque,marmoset,mouse,orangutan,panda,pig,rabbit, antisense antisense A549@0.016656,AG04450@0,BJ@0,GM12878@0.0195315,H1HESC@0.202925,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0.0207245,MCF7@0.0043515,NHEK@0,NHLF@0,SKNSHRA@0.0098305, 0 0 0 0 ENSG00000256008.1 ENST00000540369.1 chr12:121067967-121079394 2 460 10965 intronic -0.33 1 0,1,0 0 0,0,0 439.795652173913 34.3866849065207 89.35 507.734782608696 61.4787049703602 64.588 486.773913043478 67.7175558595531 62.792 0 0 cat,chimp,cow,dog,elephant,guinea_pig,horse,human,macaque,marmoset,mouse,orangutan,panda,pig,platypus,rabbit,rat, antisense antisense A549@0.016656,AG04450@0,BJ@0,GM12878@0.0195315,H1HESC@0.202925,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0.0207245,MCF7@0.0043515,NHEK@0,NHLF@0,SKNSHRA@0.0098305, 0 0 0 0 ENSG00000256364.1 ENST00000541383.1 chr12:121134927-121137304 2 573 1802 exonic -1.58 0 0,1,0 0 0,0,0 212.631762652705 277.853496115427 190.724 129.771378708551 209.636514983352 185.645 141.176265270506 212.907880133185 148.675 0 0 chimp,cow,elephant,human,macaque,marmoset,orangutan,panda,pig, antisense non_coding A549@0.029511,AG04450@0.0462,BJ@0,GM12878@0.008041,H1HESC@0.0050975,HELAS3@0,HEPG2@0.004744,HMEC@0,HSMM@0,HUVEC@0,K562@0.004038,MCF7@0,NHEK@0.0133203,NHLF@0,SKNSHRA@0.016536, 0 0 0 0 ENSG00000256364.1 ENST00000535720.1 chr12:121136067-121137344 2 581 694 exonic -2.94 0 0,1,0 0 0,0,0 78.5679862306368 664.972622478386 190.724 70.1170395869191 230.556195965418 185.884 77.9896729776248 230.309798270893 148.675 0 0 cat,chimp,cow,dog,elephant,human,macaque,marmoset,mouse,orangutan,panda,pig, antisense non_coding A549@0.029511,AG04450@0.0462,BJ@0,GM12878@0.008041,H1HESC@0.0050975,HELAS3@0,HEPG2@0.004744,HMEC@0,HSMM@0,HUVEC@0,K562@0.004038,MCF7@0,NHEK@0.0133203,NHLF@0,SKNSHRA@0.016536, 0 0 0 0 ENSG00000256569.1 ENST00000544939.1 chr12:121159310-121161442 2 567 1563 exonic 0 0 0,1,0 0 0,0,0 42.2222222222222 31.9584133077415 311 60.68430335097 39.4376199616123 3.72 62.1093474426808 44.9916826615483 3.885 0 0 cat,chimp,cow,dog,elephant,guinea_pig,horse,human,macaque,marmoset,mouse,orangutan,panda, antisense non_coding A549@0.0654645,AG04450@0,BJ@0.0113745,GM12878@0.014171,H1HESC@0.005115,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0.0081615,MCF7@0.02158,NHEK@0.008104,NHLF@0,SKNSHRA@0.019228, 0 0 0 0 ENSG00000255946.1 ENST00000542620.1 chr12:121178273-121199395 3 580 20538 intergenic 0.61 0 0,1,1 0 0,0,0 0 0 0 0 1.05156295647093 2.232 0 11.3514947901451 6.633 0 0 cat,chimp,dog,elephant,human,macaque, antisense non_coding A549@0.050002,AG04450@0.0242815,BJ@0.0275985,GM12878@0.118363,H1HESC@0.066905,HELAS3@0.0979425,HEPG2@0.0568205,HMEC@0,HSMM@0.00391,HUVEC@0.0720595,K562@0.0307135,MCF7@0.017477,NHEK@0.0896803,NHLF@0,SKNSHRA@0.105508, 0 0 0 0 ENSG00000241388.2 ENST00000537361.1 chr12:121406416-121418709 2 657 11634 intronic -0.07 0 1,1,1 0 0,0,0 0 32.1051229155922 79.236 41.3348554033486 39.7775485645522 117.672 24.0441400304414 37.2298435619735 114.277 0 0 chimp,dog,horse,human,macaque,marmoset,orangutan,pig, antisense antisense A549@2.05997,AG04450@0,BJ@0,GM12878@0.001776,H1HESC@0.0113375,HELAS3@2.58175,HEPG2@5.20236,HMEC@0,HSMM@0,HUVEC@0.0114215,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0.00185, 0 0 0 0 ENSG00000241388.2 ENST00000539163.1 chr12:121407641-121410095 1 2454 0 intergenic 0.72 0 0,0,1 0 0,1,0 0 0 0 1.49918500407498 0 5.975 1.53096984515077 0 6.275 0 1 chimp,human,orangutan, antisense antisense A549@2.05997,AG04450@0,BJ@0,GM12878@0.001776,H1HESC@0.0113375,HELAS3@2.58175,HEPG2@5.20236,HMEC@0,HSMM@0,HUVEC@0.0114215,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0.00185, 0 0 0 0 ENSG00000241388.2 ENST00000433033.2 chr12:121407933-121417550 4 608 9003 intronic -1.82 0 0,0,1 0 0,0,0 9.51480263157895 26.2803509941131 130.679 15.0427631578947 36.0887481950461 140.008 14.3782894736842 33.3800955237143 134.642 1 1 chimp,human,macaque,marmoset,orangutan, antisense antisense A549@2.05997,AG04450@0,BJ@0,GM12878@0.001776,H1HESC@0.0113375,HELAS3@2.58175,HEPG2@5.20236,HMEC@0,HSMM@0,HUVEC@0.0114215,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0.00185, 0 0 0 0 ENSG00000241388.2 ENST00000535301.1 chr12:121412188-121418768 2 534 6044 intronic 0 0 0,1,1 0 0,0,0 32.7415730337079 61.7986432825943 61.38 107.449438202247 74.9698874917273 86.808 60.9887640449438 70.0033090668431 96.831 0 0 chimp,cow,dog,elephant,guinea_pig,horse,human,macaque,marmoset,orangutan,pig,rat, antisense antisense A549@2.05997,AG04450@0,BJ@0,GM12878@0.001776,H1HESC@0.0113375,HELAS3@2.58175,HEPG2@5.20236,HMEC@0,HSMM@0,HUVEC@0.0114215,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0.00185, 0 0 0 0 ENSG00000214271.2 ENST00000394512.2 chr12:121633051-122226808 5 1380 592369 intronic 2.46 0 0,0,0 0 0,0,0 0 18.970925217221 0 3.59420289855072 21.6642076138353 15.354 3.7536231884058 27.4296004686268 15.466 0 1 chimp,human,marmoset,orangutan, lincRNA lincRNA A549@0.279811,AG04450@0.0174655,BJ@0.007908,GM12878@0.336437,H1HESC@0.0734475,HELAS3@0.589228,HEPG2@0.778565,HMEC@0,HSMM@0.004802,HUVEC@0.0109715,K562@0.0082985,MCF7@0.195769,NHEK@0.00232733,NHLF@0.0013405,SKNSHRA@0.048468, 0 0 0 0 ENSG00000256742.1 ENST00000541574.1 chr12:122018697-122031409 2 542 12168 exonic -7.70 0 0,1,1 1 0,0,0 144.014760147601 25.5187376725838 519.309 121.477859778598 30.0873602892834 535.739 119.579335793358 30.0770874424721 476.047 0 0 cat,chimp,cow,dog,elephant,guinea_pig,horse,human,macaque,marmoset,mouse,orangutan,panda,pig,rabbit,rat, antisense lincRNA A549@0.365979,AG04450@0.666296,BJ@0.15119,GM12878@2.62362,H1HESC@2.89004,HELAS3@0.856527,HEPG2@1.44231,HMEC@0.007527,HSMM@0.148067,HUVEC@0.11269,K562@0.457035,MCF7@0.411512,NHEK@0.13656,NHLF@0.832612,SKNSHRA@0.870051, 0 0 0 0 ENSG00000256811.1 ENST00000543848.1 chr12:122294165-122294965 3 431 365 exonic 6.03 0 0,0,1 0 0,0,0 31.6032482598608 27.7260273972603 0 104.227378190255 15.1479452054795 0 124.215777262181 19.5287671232877 0 0 0 cat,chimp,cow,dog,elephant,horse,human,macaque,marmoset,orangutan,panda,pig,rat, antisense antisense A549@0.0355925,AG04450@0.006821,BJ@0.016488,GM12878@0.0067385,H1HESC@0.0272485,HELAS3@0.0532185,HEPG2@0.0377105,HMEC@0.450707,HSMM@0,HUVEC@0.123059,K562@0.0853955,MCF7@0.490345,NHEK@0.00531233,NHLF@0,SKNSHRA@0.120265, 0 0 0 0 ENSG00000257020.1 ENST00000536910.1 chr12:122337854-122338900 2 432 612 intronic 0.09 0 0,1,0 0 0,0,0 0 0 0 0 0 0 0 0 0 1 1 chimp,human,macaque,marmoset,orangutan, antisense antisense A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000255856.1 ENST00000538710.1 chr12:122445340-122457920 2 814 11764 exonic -1.48 0 0,1,0 0 0,0,0 0 3.94967698061884 0 0 2.59342060523631 1.912 0 3.16729003740224 2.008 0 0 chimp,elephant,horse,human,marmoset,orangutan, antisense lincRNA A549@0.0856015,AG04450@0.067037,BJ@0.017845,GM12878@0,H1HESC@0.051328,HELAS3@0,HEPG2@0.0052775,HMEC@0.055197,HSMM@0.208129,HUVEC@0.003647,K562@0.0991955,MCF7@0.837529,NHEK@0.110809,NHLF@0.212123,SKNSHRA@0.187033, 0 0 0 0 ENSG00000256546.1 ENST00000538790.1 chr12:122501212-122506522 4 847 4457 intergenic 4.89 1 0,0,1 0 0,0,0 52.7461629279811 9.43414853040161 30.189 52.495867768595 19.9690374691497 0 51.4840613931523 20.255104330267 2.673 0 0 chimp,horse,human,macaque,marmoset,orangutan,panda, lincRNA lincRNA A549@1.29346,AG04450@0.162907,BJ@0.60557,GM12878@0.0865345,H1HESC@1.66938,HELAS3@0.473276,HEPG2@0.796796,HMEC@0.014435,HSMM@0.732679,HUVEC@1.46611,K562@4.83773,MCF7@0.140426,NHEK@0.037457,NHLF@0.610322,SKNSHRA@2.11343, 0 0 0 0 ENSG00000256546.1 ENST00000540968.1 chr12:122501255-122502564 3 584 721 intergenic -2.07 0 0,1,0 0 0,0,0 0 0 30.189 8.35616438356164 0 0 8.46575342465753 0 2.673 0 0 chimp,horse,human,macaque,marmoset,orangutan,panda, lincRNA lincRNA A549@1.29346,AG04450@0.162907,BJ@0.60557,GM12878@0.0865345,H1HESC@1.66938,HELAS3@0.473276,HEPG2@0.796796,HMEC@0.014435,HSMM@0.732679,HUVEC@1.46611,K562@4.83773,MCF7@0.140426,NHEK@0.037457,NHLF@0.610322,SKNSHRA@2.11343, 0 0 0 0 ENSG00000256546.1 ENST00000423999.2 chr12:122502263-122503728 2 891 572 intergenic -1.47 0 0,1,0 1 0,0,0 0 0 0 10.9461279461279 0 4.88 11.3389450056117 0 4.944 0 0 chimp,cow,horse,human,macaque,marmoset,orangutan,pig, lincRNA lincRNA A549@1.29346,AG04450@0.162907,BJ@0.60557,GM12878@0.0865345,H1HESC@1.66938,HELAS3@0.473276,HEPG2@0.796796,HMEC@0.014435,HSMM@0.732679,HUVEC@1.46611,K562@4.83773,MCF7@0.140426,NHEK@0.037457,NHLF@0.610322,SKNSHRA@2.11343, 0 0 0 0 ENSG00000256546.1 ENST00000535337.1 chr12:122505932-122506464 2 434 96 intergenic 0 1 0,0,1 0 0,0,0 102.940092165899 438 0 102.451612903226 774.677083333333 0 100.476958525346 783.645833333333 0 0 0 chimp,cow,dog,elephant,guinea_pig,human,macaque,marmoset,mouse,orangutan,panda,rabbit, lincRNA retained_intron A549@1.29346,AG04450@0.162907,BJ@0.60557,GM12878@0.0865345,H1HESC@1.66938,HELAS3@0.473276,HEPG2@0.796796,HMEC@0.014435,HSMM@0.732679,HUVEC@1.46611,K562@4.83773,MCF7@0.140426,NHEK@0.037457,NHLF@0.610322,SKNSHRA@2.11343, 0 0 0 0 ENSG00000223456.2 ENST00000423957.2 chr12:122739619-122740275 2 521 133 intronic 0 0 0,0,0 0 0,0,0 0 0 0 0 0 0 0 0 0 0 1 chimp,human,macaque,orangutan, sense_intronic sense_intronic A549@0.029109,AG04450@0.0106915,BJ@0.019053,GM12878@0.045078,H1HESC@0.063742,HELAS3@0.080362,HEPG2@0.0307985,HMEC@0,HSMM@0.004641,HUVEC@0.0807075,K562@0.0625615,MCF7@0.0190685,NHEK@0.013869,NHLF@0.008129,SKNSHRA@0.019156, 0 0 0 0 ENSG00000257097.1 ENST00000539034.1 chr12:122880089-122884165 2 445 3629 exonic 0 0 0,0,1 0 0,0,0 0 0 5.643 2.22921348314607 1.38440341691926 14.672 7.73483146067416 59.9895287958115 15.177 0 0 cat,chimp,dog,elephant,horse,human,macaque,marmoset,orangutan,panda,pig, lincRNA lincRNA A549@0.0196145,AG04450@0,BJ@0.001387,GM12878@0,H1HESC@0,HELAS3@0.0190455,HEPG2@0.007816,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0.0013, 0 0 0 0 ENSG00000257097.1 ENST00000535976.1 chr12:122880153-122885404 3 1742 3505 exonic 7.00 0 0,0,0 0 0,0,0 17.9563719862227 0 5.643 26.3053960964409 1.43338088445078 14.672 33.9282433983927 62.1118402282454 15.177 0 0 cat,chimp,elephant,horse,human,macaque,orangutan,panda,pig, lincRNA lincRNA A549@0.0196145,AG04450@0,BJ@0.001387,GM12878@0,H1HESC@0,HELAS3@0.0190455,HEPG2@0.007816,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0.0013, 0 0 0 0 ENSG00000256249.1 ENST00000543611.1 chr12:123171672-123200526 3 1728 27122 exonic -1.81 0 0,0,0 0 0,0,0 11.6481481481481 13.4149030307499 0 51.1909722222222 13.1465231177642 0 53.1400462962963 13.769707248728 0 0 0 cat,chimp,cow,dog,elephant,guinea_pig,human,macaque,marmoset,orangutan,panda, antisense lincRNA A549@0.042643,AG04450@0,BJ@0.043591,GM12878@0.0050585,H1HESC@0.0034335,HELAS3@0.005101,HEPG2@0.003632,HMEC@0.007096,HSMM@0.0011885,HUVEC@0,K562@0,MCF7@0.0094495,NHEK@0.210448,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000256249.1 ENST00000545293.1 chr12:123198838-123200255 2 749 666 exonic -2.75 0 0,0,0 0 0,0,0 0 0 0 19.8344459279039 0 5.704 26.0307076101469 0 10.824 0 0 cat,chimp,cow,dog,elephant,guinea_pig,horse,human,macaque,marmoset,mouse,orangutan,panda, antisense lincRNA A549@0.042643,AG04450@0,BJ@0.043591,GM12878@0.0050585,H1HESC@0.0034335,HELAS3@0.005101,HEPG2@0.003632,HMEC@0.007096,HSMM@0.0011885,HUVEC@0,K562@0,MCF7@0.0094495,NHEK@0.210448,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000256152.1 ENST00000537827.1 chr12:123349882-123351568 2 480 1204 exonic -2.23 0 1,1,1 0 0,0,0 0 0 0 26.5625 270.959302325581 0 30.51875 269.241694352159 0 0 0 cat,chimp,dog,horse,human,macaque,marmoset,mouse,orangutan,panda,pig,rat, antisense lincRNA A549@0.0840795,AG04450@0.021584,BJ@0.010041,GM12878@0.022037,H1HESC@0.014646,HELAS3@0.22324,HEPG2@0.094545,HMEC@0.03398,HSMM@0,HUVEC@1.10898,K562@0,MCF7@0.501294,NHEK@0.0322343,NHLF@0,SKNSHRA@0.440482, 0 0 0 0 ENSG00000251497.2 ENST00000506255.1 chr12:123565931-123569291 3 2188 1168 intronic 6.39 0 0,1,1 0 0,0,0 58.9424131627057 0 0 50.5356489945155 0 22.387 55.2440585009141 0 18.758 0 0 guinea_pig,human,macaque,marmoset,orangutan, lincRNA lincRNA A549@0.0083535,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0.015379,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0.001832,SKNSHRA@0.002134, 0 0 0 0 ENSG00000251497.2 ENST00000537292.1 chr12:123567337-123568676 2 1063 274 intronic 6.39 0 0,0,0 0 0,0,0 0 0 0 4.89369708372531 0 0 4.99529633113829 0 0 0 0 guinea_pig,human,macaque,marmoset,orangutan, lincRNA lincRNA A549@0.0083535,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0.015379,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0.001832,SKNSHRA@0.002134, 0 0 0 0 ENSG00000235423.2 ENST00000543217.1 chr12:123736575-123743742 2 666 6499 intronic -5.48 0 0,0,1 0 0,0,0 18.1081081081081 37.5536236344053 0 28.7267267267267 20.6674873057393 0 28.493993993994 25.2306508693645 0 1 1 chimp,human,macaque,marmoset,orangutan, processed_transcript retained_intron A549@3.3956,AG04450@5.09493,BJ@5.53648,GM12878@1.48992,H1HESC@3.13258,HELAS3@2.5677,HEPG2@3.88448,HMEC@3.27615,HSMM@4.65691,HUVEC@3.49993,K562@1.66064,MCF7@5.81183,NHEK@2.10521,NHLF@4.22159,SKNSHRA@4.90875, 0 0 0 0 ENSG00000235423.2 ENST00000542427.1 chr12:123743295-123743697 2 289 111 intergenic 3.52 0 0,0,0 0 0,0,0 0 0 0 0 0 0 0 0 0 1 1 chimp,human,macaque,marmoset,orangutan, processed_transcript retained_intron A549@3.3956,AG04450@5.09493,BJ@5.53648,GM12878@1.48992,H1HESC@3.13258,HELAS3@2.5677,HEPG2@3.88448,HMEC@3.27615,HSMM@4.65691,HUVEC@3.49993,K562@1.66064,MCF7@5.81183,NHEK@2.10521,NHLF@4.22159,SKNSHRA@4.90875, 0 0 0 0 ENSG00000256092.1 ENST00000543072.1 chr12:123849500-123850660 2 750 408 intergenic 0 0 0,1,0 1 0,0,0 8.928 28.5686274509804 41.87 110.14 196.958333333333 99.46 95.936 175.281862745098 103.389 0 0 chimp,cow,dog,elephant,guinea_pig,human,macaque,marmoset,mouse,orangutan,pig,rat, lincRNA lincRNA A549@1.1105,AG04450@0.358164,BJ@0.623714,GM12878@1.19795,H1HESC@1.41596,HELAS3@1.52685,HEPG2@1.24256,HMEC@0.310364,HSMM@0.380494,HUVEC@0.654353,K562@1.5012,MCF7@0.65632,NHEK@0.256833,NHLF@0.165309,SKNSHRA@0.750058, 0 0 0 0 ENSG00000247373.2 ENST00000498967.2 chr12:124066767-124069662 3 1947 944 exonic 34.17 0 0,1,1 0 0,0,0 50.522855675398 0 0 94.0713918849512 0 4.407 99.2675911658963 0 4.459 0 1 human,macaque,marmoset,orangutan, lincRNA lincRNA A549@0.375284,AG04450@0.212834,BJ@0.202348,GM12878@0.547518,H1HESC@0.502597,HELAS3@1.12556,HEPG2@0.659563,HMEC@0.207144,HSMM@0.271394,HUVEC@0.416587,K562@1.02511,MCF7@0.734127,NHEK@0.197161,NHLF@0.219474,SKNSHRA@0.306976, 0 0 0 0 ENSG00000255839.1 ENST00000538837.1 chr12:124192149-124192933 2 319 463 exonic -18.82 0 0,1,0 0 0,0,0 0 0 0 41.7899686520376 0 12.621 43.1473354231975 0 13.056 1 1 chimp,human,macaque,marmoset,orangutan, antisense lincRNA A549@0,AG04450@0.018445,BJ@0,GM12878@0,H1HESC@0.0064625,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000256596.1 ENST00000539391.1 chr12:124690774-124693564 2 2254 534 intergenic -0.98 0 0,0,0 0 0,0,0 0 0 0 0 0 0 0 0 0 0 1 chimp,human,marmoset,orangutan, lincRNA lincRNA A549@0.0031355,AG04450@0.011531,BJ@0,GM12878@0.0093225,H1HESC@0.044232,HELAS3@0,HEPG2@0,HMEC@0.003592,HSMM@0.0026125,HUVEC@0,K562@0.0083215,MCF7@0.0056105,NHEK@0,NHLF@0.001652,SKNSHRA@0.022779, 0 0 0 0 ENSG00000214650.2 ENST00000543970.1 chr12:124997768-124999359 2 1280 309 intronic 6.68 0 0,0,1 0 0,0,0 0 0 16.048 8.72265625 0 13.513 9.42265625 0 15.507 1 1 chimp,human,macaque,marmoset,orangutan, lincRNA lincRNA A549@0.0026305,AG04450@0.009649,BJ@0,GM12878@0,H1HESC@0.106633,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0.0730895,HUVEC@0.0670225,K562@0.004252,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0.110115, 0 0 0 0 ENSG00000246139.2 ENST00000501570.2 chr12:125343129-125362549 2 1790 17628 intronic -3.38 0 0,1,1 0 0,0,0 0 0.600181529385069 0 0 3.64488314045836 2.367 0 5.95024960290447 2.385 0 1 chimp,human,orangutan, processed_transcript lincRNA A549@0.0108705,AG04450@0.0149085,BJ@0.0123035,GM12878@0.041137,H1HESC@0.0031355,HELAS3@0.0802255,HEPG2@0.211652,HMEC@0.197044,HSMM@0.002078,HUVEC@0.03333,K562@0.0398905,MCF7@0.0432885,NHEK@0.0265317,NHLF@0.00525,SKNSHRA@0.0245945, 0 0 0 0 ENSG00000256814.1 ENST00000543922.1 chr12:125634604-125635940 2 583 751 intergenic -12.72 0 0,0,0 0 0,0,0 0 0 16.592 0 0 5.456 0 0 5.522 1 1 chimp,human,macaque,marmoset,orangutan, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0.0669875,H1HESC@0.04064,HELAS3@0.031757,HEPG2@0,HMEC@0.013999,HSMM@0,HUVEC@0,K562@0.0045765,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0.0077565, 0 0 0 0 ENSG00000249267.2 ENST00000545784.1 chr12:126443234-126467920 6 2072 22604 intergenic 4.30 0 0,1,0 0 0,0,0 0 9.04808883383472 0 0 2.45071668731198 0 0 6.71009555830827 0 1 1 chimp,human,macaque,marmoset,orangutan, lincRNA lincRNA A549@0.003278,AG04450@0,BJ@0.0034435,GM12878@0.165728,H1HESC@0.155157,HELAS3@0.0139125,HEPG2@0.0254295,HMEC@0.021573,HSMM@0,HUVEC@0,K562@0,MCF7@0.0146335,NHEK@0.007358,NHLF@0,SKNSHRA@0.029623, 0 0 0 0 ENSG00000249267.2 ENST00000507313.1 chr12:126443236-126467919 6 2813 21860 intergenic 0.15 0 0,1,0 0 0,0,0 0 9.3560384263495 0 0 2.53412625800549 0 0 6.93847209515096 0 0 1 chimp,human,macaque,marmoset, lincRNA lincRNA A549@0.003278,AG04450@0,BJ@0.0034435,GM12878@0.165728,H1HESC@0.155157,HELAS3@0.0139125,HEPG2@0.0254295,HMEC@0.021573,HSMM@0,HUVEC@0,K562@0,MCF7@0.0146335,NHEK@0.007358,NHLF@0,SKNSHRA@0.029623, 0 0 0 0 ENSG00000249267.2 ENST00000502479.1 chr12:126443248-126464994 6 4966 16770 intergenic 4.31 0 0,0,0 0 0,0,0 10.4071687474829 6.1309481216458 49.59 0 3.02689326177698 4.635 1.35602094240838 8.11454979129398 8.86 0 1 chimp,human,macaque,orangutan, lincRNA lincRNA A549@0.003278,AG04450@0,BJ@0.0034435,GM12878@0.165728,H1HESC@0.155157,HELAS3@0.0139125,HEPG2@0.0254295,HMEC@0.021573,HSMM@0,HUVEC@0,K562@0,MCF7@0.0146335,NHEK@0.007358,NHLF@0,SKNSHRA@0.029623, 0 0 0 0 ENSG00000256276.1 ENST00000534849.1 chr12:126468248-126470780 3 567 1961 intergenic 2.68 0 0,0,0 0 0,0,0 0 0 0 0 0 0 0 0 0 1 1 chimp,human,macaque,marmoset,orangutan, lincRNA lincRNA A549@0.0134995,AG04450@0,BJ@0,GM12878@0.116766,H1HESC@0.12371,HELAS3@0.0241935,HEPG2@0,HMEC@0.050285,HSMM@0,HUVEC@0,K562@0,MCF7@0.007134,NHEK@0.0190677,NHLF@0,SKNSHRA@0.075278, 0 0 0 0 ENSG00000256342.1 ENST00000545642.1 chr12:126580538-126588481 5 638 7297 intergenic -1.37 0 0,0,0 0 0,0,0 0 0 0 0 0.594079758804988 0 0 0.617377004248321 0 1 1 chimp,human,macaque,marmoset,orangutan, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000256763.1 ENST00000542804.1 chr12:126652781-126656212 4 633 2792 intergenic -2.04 0 0,0,0 0 0,0,0 0 0 0 0 0 0 0 0 0 1 1 chimp,human,macaque,marmoset,orangutan, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0.016338,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000255778.1 ENST00000536505.1 chr12:126675924-126709860 2 278 33656 intergenic 0.92 0 0,1,1 0 0,0,0 0 1.38724150225814 0 0 0.463037794152603 0 0 3.65955550273354 0 0 0 chimp,human,macaque,marmoset,orangutan,rabbit, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0.0428505,H1HESC@0.0296355,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0.051652, 0 0 0 0 ENSG00000257061.1 ENST00000539588.1 chr12:126842580-126843442 2 773 87 intergenic 2.72 0 0,1,1 0 0,0,0 0 0 0 0 0 0 3.91461836998706 0 19.08 0 0 cow,dog,elephant,horse,human,macaque,marmoset,orangutan,pig,platypus, lincRNA lincRNA A549@0.007128,AG04450@0,BJ@0,GM12878@0.029626,H1HESC@0.0256355,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0.008798, 0 0 0 0 ENSG00000255595.1 ENST00000536639.1 chr12:126843848-126845611 2 1308 453 intergenic -4.08 1 0,0,0 0 0,0,0 16.0795107033639 0 20.4 0 0 2.232 0 0 5.049 1 1 chimp,human,macaque,marmoset,orangutan, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0.107687,H1HESC@0.21873,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0.0726245, 0 0 0 0 ENSG00000256494.1 ENST00000536422.1 chr12:126885338-126890074 2 972 3762 intergenic 2.97 0 0,0,0 0 0,0,0 0 0 0 0 0 0 0 0.452153110047847 0 0 0 chimp,horse,human,macaque,marmoset,orangutan,panda, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0.0041395,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000256927.1 ENST00000544419.1 chr12:126910536-126918554 3 477 7537 intergenic -1.87 0 0,0,0 0 0,0,0 16.1635220125786 2.71606740082261 0 27.9412997903564 1.73663261244527 0 28.440251572327 3.37455220910176 0 1 1 chimp,human,macaque,marmoset,orangutan, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0.005793, 0 0 0 0 ENSG00000214043.3 ENST00000544759.1 chr12:126927027-126942847 5 737 15075 intergenic -0.12 0 0,0,0 0 0,1,0 0 0 0 0 0 0 0 0.274029850746269 0 1 1 chimp,human,macaque,marmoset,orangutan, lincRNA processed_transcript A549@0,AG04450@0,BJ@0,GM12878@0.0239795,H1HESC@0.0184665,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0.008232, 0 0 0 0 ENSG00000214043.3 ENST00000397346.3 chr12:126927027-126957336 12 2446 27841 intergenic 6.73 0 0,0,0 0 0,1,0 0 0 0 0 0 0 0 0.148378291009662 0 1 1 chimp,human,macaque,marmoset,orangutan, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0.0239795,H1HESC@0.0184665,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0.008232, 0 0 0 0 ENSG00000214043.3 ENST00000539969.1 chr12:126927072-126954352 11 1791 25469 intergenic 5.46 0 0,0,0 0 0,1,0 0 0 0 0 0 0 0 0.162197180886568 0 0 1 chimp,human,macaque,orangutan, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0.0239795,H1HESC@0.0184665,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0.008232, 0 0 0 0 ENSG00000214043.3 ENST00000545767.1 chr12:126927072-126954352 10 1553 25709 intergenic 1.43 0 0,0,0 0 0,1,0 0 0 0 0 0 0 0 0.160683029289354 0 1 1 chimp,human,macaque,marmoset,orangutan, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0.0239795,H1HESC@0.0184665,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0.008232, 0 0 0 0 ENSG00000214043.3 ENST00000540774.1 chr12:126927512-126954352 9 1491 25333 intergenic 1.43 0 0,0,0 0 0,1,0 0 0 0 0 0 0 0 0.163067935104409 0 1 1 chimp,human,macaque,marmoset,orangutan, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0.0239795,H1HESC@0.0184665,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0.008232, 0 0 0 0 ENSG00000256732.1 ENST00000545853.1 chr12:127094580-127174806 2 454 79770 intergenic -0.60 0 0,0,0 0 0,0,0 0 1.04341231039238 0 0 1.01652250219381 0 0 1.27521624670929 0 1 1 chimp,human,macaque,marmoset,orangutan, processed_transcript lincRNA A549@0,AG04450@0,BJ@0,GM12878@0.029403,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000255944.1 ENST00000541769.1 chr12:127112718-127174868 3 416 61730 intergenic -0.60 0 0,0,0 0 0,0,0 0 1.07344889032885 0 0 1.31359144662239 0 0 1.60285112587073 0 1 1 chimp,human,macaque,marmoset,orangutan, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 163 2 106 2 ENSG00000256732.1 ENST00000540814.1 chr12:127137496-127174852 2 408 36946 intergenic -0.60 0 0,0,0 0 0,0,0 0 0.184593731391761 0 0 0.831131922264927 0 0 1.31454013966329 0 1 1 chimp,human,macaque,marmoset,orangutan, processed_transcript lincRNA A549@0,AG04450@0,BJ@0,GM12878@0.029403,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000256732.1 ENST00000541065.1 chr12:127137512-127174864 3 523 36825 intergenic -0.60 0 0,0,0 0 0,0,0 0 0.18520027155465 0 0 0.833862864901561 0 0 1.31885947046843 0 1 1 chimp,human,macaque,marmoset,orangutan, processed_transcript lincRNA A549@0,AG04450@0,BJ@0,GM12878@0.029403,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 163 2 106 2 ENSG00000256732.1 ENST00000537478.1 chr12:127148225-127174814 2 652 25935 intergenic -0.60 1 0,0,0 0 0,0,0 0 0 0 0 0.589897821476769 0 0 1.13441295546559 0 0 1 chimp,human,marmoset, processed_transcript lincRNA A549@0,AG04450@0,BJ@0,GM12878@0.029403,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000255998.1 ENST00000544711.1 chr12:127175025-127176464 2 337 1100 intergenic 2.77 0 0,0,0 0 0,0,0 0 0 0 0 0 0 0 0 0 1 1 chimp,human,macaque,marmoset,orangutan, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000255998.1 ENST00000545535.1 chr12:127175027-127180378 3 537 4810 intergenic 5.60 0 0,0,0 0 0,0,0 0 0 0 0 0 0 0 0 0 0 1 chimp,human,macaque,orangutan, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000189238.4 ENST00000537374.1 chr12:127210816-127229872 4 1684 17366 intergenic 0.15 1 0,1,0 0 0,1,0 0 0 0 0 0 0 0 0 0 1 1 chimp,human,macaque,marmoset,orangutan, lincRNA lincRNA A549@0.002396,AG04450@0,BJ@0,GM12878@0.0154885,H1HESC@0.008101,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000189238.4 ENST00000541359.1 chr12:127211108-127227590 2 674 15806 intergenic 10.02 0 0,0,0 0 0,1,0 0 0 0 0 0 0 0 0 0 0 1 chimp,human,macaque,orangutan, lincRNA lincRNA A549@0.002396,AG04450@0,BJ@0,GM12878@0.0154885,H1HESC@0.008101,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000189238.4 ENST00000539315.1 chr12:127211146-127230074 2 854 18072 intergenic 16.38 0 0,0,0 0 0,1,0 0 0 0 0 0 0 0 0 0 0 1 chimp,human,orangutan, lincRNA lincRNA A549@0.002396,AG04450@0,BJ@0,GM12878@0.0154885,H1HESC@0.008101,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000256128.1 ENST00000540684.1 chr12:127214333-127256957 6 882 41732 intergenic 5.11 0 0,0,1 0 0,0,0 0 0 0 0 1.16493338445318 0 0 2.78136681683121 0 0 1 chimp,human,marmoset,orangutan, lincRNA lincRNA A549@0.0069915,AG04450@0,BJ@0,GM12878@0.118732,H1HESC@0.016269,HELAS3@0.0386835,HEPG2@0.0194375,HMEC@0,HSMM@0.16477,HUVEC@0,K562@0.008905,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0.0025595, 0 0 0 0 ENSG00000256128.1 ENST00000544499.1 chr12:127216842-127219944 2 364 2736 intergenic -1.66 0 0,0,1 0 0,0,0 0 0 0 0 0 0 0 0 0 1 1 chimp,human,macaque,marmoset,orangutan, lincRNA lincRNA A549@0.0069915,AG04450@0,BJ@0,GM12878@0.118732,H1HESC@0.016269,HELAS3@0.0386835,HEPG2@0.0194375,HMEC@0,HSMM@0.16477,HUVEC@0,K562@0.008905,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0.0025595, 0 0 0 0 ENSG00000256128.1 ENST00000546117.1 chr12:127216889-127221377 2 229 4257 intergenic 0.20 0 0,0,1 0 0,0,0 0 0 0 0 0 0 0 0 0 1 1 chimp,human,macaque,marmoset,orangutan, lincRNA lincRNA A549@0.0069915,AG04450@0,BJ@0,GM12878@0.118732,H1HESC@0.016269,HELAS3@0.0386835,HEPG2@0.0194375,HMEC@0,HSMM@0.16477,HUVEC@0,K562@0.008905,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0.0025595, 0 0 0 0 ENSG00000189238.4 ENST00000535118.1 chr12:127221553-127227563 2 456 5552 intergenic -5.25 0 0,1,0 0 0,1,0 0 0 0 0 0 0 0 0 0 0 1 chimp,human,marmoset,orangutan, lincRNA lincRNA A549@0.002396,AG04450@0,BJ@0,GM12878@0.0154885,H1HESC@0.008101,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000189238.4 ENST00000535544.1 chr12:127226211-127230798 3 2812 1771 intergenic 6.47 0 0,0,0 0 0,1,0 0 0 0 0 0 0 0 0 0 1 1 chimp,human,macaque,marmoset,orangutan, lincRNA lincRNA A549@0.002396,AG04450@0,BJ@0,GM12878@0.0154885,H1HESC@0.008101,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000189238.4 ENST00000345111.3 chr12:127227282-127230782 3 2123 1373 intergenic 2.39 0 0,0,0 0 0,1,0 0 0 0 0 0 0 0 0 0 1 1 chimp,human,macaque,marmoset,orangutan, lincRNA lincRNA A549@0.002396,AG04450@0,BJ@0,GM12878@0.0154885,H1HESC@0.008101,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000189238.4 ENST00000540250.1 chr12:127227283-127229878 3 1187 1404 intergenic 0.15 1 0,0,0 0 0,1,0 0 0 0 0 0 0 0 0 0 0 0 chimp,horse,human,macaque,marmoset,mouse,orangutan, lincRNA lincRNA A549@0.002396,AG04450@0,BJ@0,GM12878@0.0154885,H1HESC@0.008101,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000256128.1 ENST00000542248.1 chr12:127232602-127256902 4 544 23750 intergenic 0 0 0,0,0 0 0,0,0 0 0 0 0 2.04694736842105 0 0 4.88724210526316 0 1 1 chimp,human,macaque,marmoset,orangutan, lincRNA lincRNA A549@0.0069915,AG04450@0,BJ@0,GM12878@0.118732,H1HESC@0.016269,HELAS3@0.0386835,HEPG2@0.0194375,HMEC@0,HSMM@0.16477,HUVEC@0,K562@0.008905,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0.0025595, 0 0 0 0 ENSG00000256128.1 ENST00000545508.1 chr12:127236710-127245591 2 400 8479 intergenic 0 0 0,0,0 0 0,0,0 0 0 0 0 0.421040217006723 0 0 1.13456775563156 0 1 1 chimp,human,macaque,marmoset,orangutan, lincRNA lincRNA A549@0.0069915,AG04450@0,BJ@0,GM12878@0.118732,H1HESC@0.016269,HELAS3@0.0386835,HEPG2@0.0194375,HMEC@0,HSMM@0.16477,HUVEC@0,K562@0.008905,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0.0025595, 0 0 0 0 ENSG00000256128.1 ENST00000536517.1 chr12:127236887-127256808 3 418 19499 intergenic 0 0 0,1,1 0 0,0,0 0 0 0 0 1.63269911277501 0 0 5.0726703933535 0 0 1 chimp,human,macaque,orangutan, lincRNA lincRNA A549@0.0069915,AG04450@0,BJ@0,GM12878@0.118732,H1HESC@0.016269,HELAS3@0.0386835,HEPG2@0.0194375,HMEC@0,HSMM@0.16477,HUVEC@0,K562@0.008905,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0.0025595, 0 0 0 0 ENSG00000249873.2 ENST00000507482.2 chr12:127354036-127359236 3 1483 3713 intergenic 1.31 0 0,0,0 0 0,0,0 0 0 0 0 0 0 0 0 0 0 1 chimp,human,macaque,orangutan, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000249873.2 ENST00000541348.1 chr12:127354647-127359196 3 824 3721 intergenic 1.31 0 0,0,0 0 0,0,0 0 0 0 0 0 0 0 0 0 0 1 chimp,human,macaque,orangutan, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000249873.2 ENST00000544727.1 chr12:127355012-127359211 3 479 3716 intergenic 1.31 0 0,0,1 0 0,0,0 0 0 0 0 0 0 0 0 0 0 0 chimp,cow,human,macaque,marmoset,orangutan, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000256286.1 ENST00000543451.1 chr12:127359367-127360778 2 284 1125 intergenic 0 0 0,0,0 0 0,0,0 0 0 0 0 0 0 0 0 0 1 1 chimp,human,macaque,marmoset,orangutan, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000249345.2 ENST00000512624.2 chr12:127399766-127544942 7 1337 143827 intergenic 4.53 0 0,1,0 1 0,0,0 0 1.16005339748448 0 0 1.00914292865735 0 0 3.00408824490534 0 1 1 chimp,human,macaque,marmoset,orangutan, lincRNA lincRNA A549@0.0055135,AG04450@0,BJ@0.005748,GM12878@0.01399,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0.819786,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000249345.2 ENST00000540244.1 chr12:127460384-127544946 4 685 83871 intergenic 0.08 0 0,1,0 1 0,0,0 0 0.400364846013521 0 0 0.313636417832147 0 0 2.98991308080266 0 1 1 chimp,human,macaque,marmoset,orangutan, lincRNA lincRNA A549@0.0055135,AG04450@0,BJ@0.005748,GM12878@0.01399,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0.819786,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000249345.2 ENST00000546062.1 chr12:127515073-127544894 3 560 29257 intergenic 0.51 0 0,1,1 1 0,0,0 0 0.641248248282462 0 0 0.899101069829443 0 0 1.84034590012647 0 1 1 chimp,human,macaque,marmoset,orangutan, lincRNA lincRNA A549@0.0055135,AG04450@0,BJ@0.005748,GM12878@0.01399,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0.819786,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000256001.1 ENST00000541419.1 chr12:127629617-127631077 3 502 954 intergenic -6.21 0 0,1,0 0 0,0,0 0 0 0 0 0 0 0 0 0 1 1 chimp,human,macaque,marmoset,orangutan, lincRNA lincRNA A549@0.0183645,AG04450@0,BJ@0.0099995,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0.0749595,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0.0093755, 0 0 0 0 ENSG00000256001.1 ENST00000535022.1 chr12:127630186-127630534 2 240 106 intergenic -8.05 0 0,1,1 1 0,0,0 0 0 0 0 0 0 0 0 0 0 0 chimp,elephant,human,macaque,marmoset,orangutan, lincRNA lincRNA A549@0.0183645,AG04450@0,BJ@0.0099995,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0.0749595,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0.0093755, 0 0 0 0 ENSG00000256292.1 ENST00000536330.1 chr12:127759012-127768828 4 720 9090 intergenic 5.96 0 0,1,0 0 0,0,0 0 0 0 0 1.57029702970297 0 0 2.03685368536854 0 0 1 chimp,human,orangutan, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0.0141005,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000256362.1 ENST00000545739.1 chr12:127808700-127824617 3 849 15064 intergenic -3.47 0 0,0,0 0 0,0,0 0 4.00577535847053 0 0 2.16887944768986 0 4.80565371024735 11.9024163568773 0 0 0 chimp,cow,dog,horse,human,macaque,marmoset,opossum,orangutan, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000255945.1 ENST00000535247.1 chr12:128082713-128084260 2 554 991 intergenic -3.05 0 0,0,1 0 0,0,0 0 0 0 0 3.13521695257316 0 0 2.2795156407669 0 1 1 chimp,human,macaque,marmoset,orangutan, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0.0351645,H1HESC@0.01069,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000256022.1 ENST00000544251.1 chr12:128115793-128120664 3 676 4191 intergenic -0.46 0 0,0,0 0 0,0,0 0 0 0 0 1.01288475304223 0 0 1.03435934144596 0 0 1 chimp,human,macaque,orangutan, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000256022.1 ENST00000540490.1 chr12:128118641-128120640 3 845 1150 intergenic -1.04 0 0,0,0 0 0,0,0 0 0 0 0 0 0 0 0 0 0 1 chimp,human,orangutan, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000256022.1 ENST00000546180.1 chr12:128118641-128121012 4 955 1410 intergenic -1.04 0 0,0,0 0 0,0,0 0 0 18.36 0 0 51.669 0 0 53.839 0 1 chimp,human,marmoset,orangutan, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000256922.1 ENST00000541797.1 chr12:128278072-128305728 3 459 27193 intergenic 0.38 0 0,0,0 0 0,0,0 0 3.45596293163682 0 0 0.679035045783841 0 0 2.00062516088699 0 1 1 chimp,human,macaque,marmoset,orangutan, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0.0174535,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0.0276825,HUVEC@0,K562@0.147666,MCF7@0,NHEK@0.002763,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000256597.1 ENST00000536342.1 chr12:128366162-128367536 3 403 967 intergenic -1.35 0 0,0,1 0 0,0,0 32.0099255583127 25.4395036194416 0 14.7766749379653 13.7104446742503 0 26.0272952853598 18.4281282316443 0 0 0 chimp,dog,guinea_pig,horse,human,macaque,marmoset,mouse,orangutan,rat, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000256193.1 ENST00000544645.1 chr12:128399917-128436055 3 1927 34207 intergenic -0.46 0 0,0,1 0 0,0,0 2.74001037882719 0.573566813810039 75.072 1.67306694343539 0.482386646008127 10.189 1.74727555786196 0.717280088870699 10.69 1 1 chimp,human,macaque,marmoset,orangutan, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0.0015155,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0.001178,HUVEC@0,K562@0.002799,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000256193.1 ENST00000540882.1 chr12:128399987-128435995 4 1931 34071 intergenic -0.46 0 0,0,0 0 0,0,0 0 0.575856300079246 80.352 1.66960124287934 0.484312171641572 10.189 1.74365613671673 0.72014323031317 10.69 0 1 chimp,human,macaque,orangutan, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0.0015155,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0.001178,HUVEC@0,K562@0.002799,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000256193.1 ENST00000542089.1 chr12:128400017-128436097 4 1928 34146 intergenic -0.46 0 0,0,1 0 0,0,0 0 0.574591460200316 80.352 1.67219917012448 0.483248403912611 10.189 1.74636929460581 0.718561471328999 10.69 1 1 chimp,human,macaque,marmoset,orangutan, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0.0015155,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0.001178,HUVEC@0,K562@0.002799,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000256971.1 ENST00000538901.1 chr12:128425140-128434705 2 192 9371 intergenic 0 0 0,0,0 0 0,0,0 0 0 0 0 0.374559812186533 0 0 0.393981432077686 0 1 1 chimp,human,macaque,marmoset,orangutan, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0.0587205,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@2.23771,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000256643.1 ENST00000543651.1 chr12:128508333-128511711 3 549 2825 intergenic 1.99 0 0,0,0 0 0,0,0 0 0 0 0 0 0 0 0 0 1 1 chimp,human,macaque,marmoset,orangutan, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0.013556,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000256551.1 ENST00000540745.1 chr12:128571530-128602677 4 797 30344 intergenic 3.36 0 0,0,1 0 0,0,0 0 1.80332190877933 0 0 0.188307408383865 0 0 0.641543633008173 20.14 0 0 cat,chimp,human,macaque,marmoset,orangutan, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000256551.1 ENST00000536341.1 chr12:128596774-128602675 3 543 5354 intergenic 3.36 0 0,0,1 0 0,0,0 0 5.34553604781472 0 0 0 0 0 0 20.14 0 0 human,macaque,marmoset,pig, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000256659.1 ENST00000541258.1 chr12:128602762-128606497 3 1653 2078 intergenic 3.22 0 0,0,0 0 0,0,0 0 0 0 0 0 0 0 68.5726660250241 0 0 1 human,macaque,marmoset,orangutan, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0.012601, 0 0 0 0 ENSG00000257025.1 ENST00000536216.1 chr12:128884523-128889359 2 562 4272 intronic 0.80 0 0,1,0 0 0,0,0 0 18.25 116.277 0 10.4805711610487 31.654 0 11.374297752809 53.284 0 0 chimp,human,macaque,marmoset,panda, sense_intronic lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0.0511385, 0 0 0 0 ENSG00000249196.2 ENST00000512133.2 chr12:129594174-129597839 2 2269 1394 intronic 9.09 0 0,0,1 1 0,0,0 0 0 0 0 4.09182209469154 0 0 4.27331420373027 0 0 0 chimp,horse,human,marmoset,orangutan, lincRNA lincRNA A549@0.135334,AG04450@0,BJ@0.029286,GM12878@0.16296,H1HESC@0.0048395,HELAS3@0.021967,HEPG2@0.004945,HMEC@0,HSMM@0,HUVEC@0.0898245,K562@1.88699,MCF7@0.0079345,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000249196.2 ENST00000542535.1 chr12:129594238-129597839 3 439 3158 intronic 2.72 0 1,1,1 1 0,0,0 0 0 0 0 1.80620645978467 0 0 1.8863204559848 0 0 0 NA lincRNA lincRNA A549@0.135334,AG04450@0,BJ@0.029286,GM12878@0.16296,H1HESC@0.0048395,HELAS3@0.021967,HEPG2@0.004945,HMEC@0,HSMM@0,HUVEC@0.0898245,K562@1.88699,MCF7@0.0079345,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000249196.2 ENST00000510001.2 chr12:129594240-129597839 2 291 3306 intronic 1.08 0 1,1,1 1 0,0,0 0 0 0 0 1.72534785238959 0 0 1.80187537810042 0 0 0 NA lincRNA lincRNA A549@0.135334,AG04450@0,BJ@0.029286,GM12878@0.16296,H1HESC@0.0048395,HELAS3@0.021967,HEPG2@0.004945,HMEC@0,HSMM@0,HUVEC@0.0898245,K562@1.88699,MCF7@0.0079345,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000249196.2 ENST00000541320.1 chr12:129594240-129597839 3 437 3158 intronic 2.72 0 1,1,1 1 0,0,0 0 0 0 0 1.80620645978467 0 0 1.8863204559848 0 0 0 NA lincRNA lincRNA A549@0.135334,AG04450@0,BJ@0.029286,GM12878@0.16296,H1HESC@0.0048395,HELAS3@0.021967,HEPG2@0.004945,HMEC@0,HSMM@0,HUVEC@0.0898245,K562@1.88699,MCF7@0.0079345,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000249196.2 ENST00000537367.1 chr12:129594244-129597838 4 527 3061 intronic 2.72 0 1,1,1 1 0,0,0 0 0 0 0 1.86344331917674 0 0 1.94609604704345 0 0 1 chimp,human,orangutan, lincRNA lincRNA A549@0.135334,AG04450@0,BJ@0.029286,GM12878@0.16296,H1HESC@0.0048395,HELAS3@0.021967,HEPG2@0.004945,HMEC@0,HSMM@0,HUVEC@0.0898245,K562@1.88699,MCF7@0.0079345,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000249196.2 ENST00000508925.2 chr12:129595538-129597839 3 624 1673 intronic 1.81 0 1,1,1 0 0,0,0 0 0 0 0 3.40944411237298 0 0 3.56066945606695 0 0 1 chimp,human,marmoset,orangutan, lincRNA lincRNA A549@0.135334,AG04450@0,BJ@0.029286,GM12878@0.16296,H1HESC@0.0048395,HELAS3@0.021967,HEPG2@0.004945,HMEC@0,HSMM@0,HUVEC@0.0898245,K562@1.88699,MCF7@0.0079345,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000249196.2 ENST00000540739.1 chr12:129595639-129597839 3 487 1709 intronic 1.81 0 1,1,1 0 0,0,0 0 0 0 0 3.3376243417203 0 0 3.4856641310708 0 0 1 chimp,human,marmoset,orangutan, lincRNA processed_transcript A549@0.135334,AG04450@0,BJ@0.029286,GM12878@0.16296,H1HESC@0.0048395,HELAS3@0.021967,HEPG2@0.004945,HMEC@0,HSMM@0,HUVEC@0.0898245,K562@1.88699,MCF7@0.0079345,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000256699.1 ENST00000542578.1 chr12:129693146-129697207 5 1563 2490 exonic 3.08 0 0,0,0 0 0,0,0 13.9763275751759 0 0 19.469609724888 2.67710843373494 0 26.9520153550864 7.03815261044177 0 0 0 chimp,cow,human,macaque,marmoset,orangutan, antisense lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0.0083255,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000256085.1 ENST00000539362.1 chr12:130005848-130007308 2 737 721 intronic -0.89 0 0,0,0 0 0,0,0 0 0 0 0 0 3.018 0 0 10.943 0 0 chimp,dog,horse,human,macaque,marmoset,orangutan, sense_intronic lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0.248414,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000256137.1 ENST00000544036.1 chr12:130165972-130182772 3 389 16407 intronic -9.53 0 0,0,0 0 0,0,0 0 1.02785396477113 10.063 0 0.354421893094411 0 0 0.540379106478942 0 1 1 chimp,human,macaque,marmoset,orangutan, sense_intronic lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0.019106,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000251536.2 ENST00000502221.2 chr12:130336753-130339489 2 1984 750 intronic 3.32 0 0,0,0 0 0,0,0 0 0 0 0 0 0 0 0 192.189 1 1 chimp,human,macaque,marmoset,orangutan, sense_intronic lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0.248048,HELAS3@0.0022755,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000214039.2 ENST00000397340.2 chr12:130517999-130526887 4 3524 5358 intergenic 4.58 0 0,0,0 0 0,1,0 0 0 0 0 0 0 2.82548240635641 1.29376633072042 0 0 1 chimp,human,macaque,orangutan, lincRNA lincRNA A549@0.0044735,AG04450@0,BJ@0,GM12878@0,H1HESC@0.002175,HELAS3@0.0109175,HEPG2@0.0018245,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0.000583,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000214039.2 ENST00000538806.1 chr12:130517999-130529602 4 4547 7050 intergenic 5.60 0 0,0,0 0 0,1,0 0 0 185.06 0 0 50.303 2.18979546954036 0.983262411347518 62.415 0 1 chimp,human,orangutan, lincRNA lincRNA A549@0.0044735,AG04450@0,BJ@0,GM12878@0,H1HESC@0.002175,HELAS3@0.0109175,HEPG2@0.0018245,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0.000583,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000214039.2 ENST00000291374.6 chr12:130521159-130526887 2 518 5208 intergenic 0 0 0,0,0 0 0,1,0 0 0 0 0 0 0 19.2220077220077 1.3310291858679 0 0 0 chimp,elephant,human,macaque,marmoset,orangutan, lincRNA lincRNA A549@0.0044735,AG04450@0,BJ@0,GM12878@0,H1HESC@0.002175,HELAS3@0.0109175,HEPG2@0.0018245,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0.000583,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000256298.1 ENST00000536512.1 chr12:130531677-130532921 2 351 891 intergenic 0 0 0,0,1 0 0,0,0 0 0 0 0 0 3.72 0 0 3.885 0 0 chimp,horse,human,macaque,marmoset,orangutan, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000256906.1 ENST00000535487.1 chr12:130554870-130557230 2 1711 647 intergenic 5.21 1 0,1,0 0 0,0,0 0 0 0 0 0 0 0 0 0 0 1 chimp,human,macaque,orangutan, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0.0685325,HELAS3@0.0030985,HEPG2@0,HMEC@0,HSMM@0.0026615,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000250208.2 ENST00000505807.2 chr12:130634894-130646768 4 4155 7713 intergenic 4.66 0 0,1,0 1 0,0,0 0.332129963898917 63.0775314404253 225.69 2.4043321299639 50.6237521068326 248.728 1.20818291215403 76.0824581874757 253.592 0 1 chimp,human,macaque,orangutan, lincRNA lincRNA A549@0.00059,AG04450@0,BJ@0,GM12878@0,H1HESC@0.037585,HELAS3@6.2964,HEPG2@1.29399,HMEC@0,HSMM@0.184459,HUVEC@0,K562@0,MCF7@0,NHEK@0.322564,NHLF@0.016535,SKNSHRA@0, 0 0 0 0 ENSG00000250208.2 ENST00000509760.1 chr12:130636138-130646223 4 3674 6405 intergenic 4.83 0 0,1,1 0 0,0,0 0 73.9480093676815 14.49 3.73434948285248 54.4529274004684 53.006 7.93984757757213 82.1862607338017 90.08 0 1 chimp,human,macaque,orangutan, lincRNA lincRNA A549@0.00059,AG04450@0,BJ@0,GM12878@0,H1HESC@0.037585,HELAS3@6.2964,HEPG2@1.29399,HMEC@0,HSMM@0.184459,HUVEC@0,K562@0,MCF7@0,NHEK@0.322564,NHLF@0.016535,SKNSHRA@0, 0 0 0 0 ENSG00000250208.2 ENST00000542000.1 chr12:130639817-130646689 2 692 6178 intergenic 1.46 1 1,1,1 1 0,0,0 1.99421965317919 78.7499190676594 169.521 14.4364161849711 63.2018452573648 191.295 7.25433526011561 94.9860796374231 197.344 0 0 chimp,horse,human,macaque,marmoset,orangutan, lincRNA retained_intron A549@0.00059,AG04450@0,BJ@0,GM12878@0,H1HESC@0.037585,HELAS3@6.2964,HEPG2@1.29399,HMEC@0,HSMM@0.184459,HUVEC@0,K562@0,MCF7@0,NHEK@0.322564,NHLF@0.016535,SKNSHRA@0, 0 0 0 0 ENSG00000250208.2 ENST00000537095.1 chr12:130640279-130646801 3 508 6010 intergenic -4.57 0 0,1,0 1 0,0,0 2.71653543307087 80.9512479201331 249.153 19.6653543307087 64.9685524126456 272.719 17.0196850393701 97.0379367720465 277.088 0 1 chimp,human,marmoset,orangutan, lincRNA lincRNA A549@0.00059,AG04450@0,BJ@0,GM12878@0,H1HESC@0.037585,HELAS3@6.2964,HEPG2@1.29399,HMEC@0,HSMM@0.184459,HUVEC@0,K562@0,MCF7@0,NHEK@0.322564,NHLF@0.016535,SKNSHRA@0, 0 0 0 0 ENSG00000256064.1 ENST00000539532.1 chr12:130904080-130905564 2 413 1069 intronic 0 0 0,1,1 0 0,0,0 0 0 0 0 0 0 0 0 1.701 1 1 chimp,human,macaque,marmoset,orangutan, sense_intronic lincRNA A549@0,AG04450@0,BJ@0,GM12878@0.0145975,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0.291046, 0 0 0 0 ENSG00000256343.1 ENST00000443685.2 chr12:131143286-131145039 2 525 1226 intronic 2.50 0 0,0,0 0 0,0,0 0 0 0 0 0 28.022 0 0 44.251 1 1 chimp,human,macaque,marmoset,orangutan, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000256250.1 ENST00000546264.1 chr12:131295151-131296983 2 585 1245 intronic 5.87 0 0,1,0 0 0,0,0 0 0 0 0 0 0 0 0 0 0 1 chimp,human,macaque,marmoset, antisense lincRNA A549@0,AG04450@0.0050435,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000256299.1 ENST00000542821.1 chr12:131295366-131297167 2 315 1484 intronic -0.78 0 0,0,0 0 0,0,0 0 0 20.646 0 0 27.384 0 0 43.621 0 1 chimp,human,macaque,marmoset, processed_transcript lincRNA A549@0.0694805,AG04450@0,BJ@0.050836,GM12878@0.101618,H1HESC@0,HELAS3@0.010741,HEPG2@0.011077,HMEC@0,HSMM@0,HUVEC@0.0157095,K562@0.0413065,MCF7@0.0351115,NHEK@0,NHLF@0,SKNSHRA@0.027784, 0 0 0 0 ENSG00000256204.1 ENST00000537998.1 chr12:131462107-131463313 2 407 797 intronic -2.97 0 0,0,1 0 0,0,0 18.3783783783784 0 0 0 0 0 0 9.62107904642409 0 0 0 chimp,cow,horse,human,macaque,marmoset,orangutan,panda, antisense lincRNA A549@0,AG04450@0,BJ@0.114888,GM12878@0.054025,H1HESC@0,HELAS3@0,HEPG2@0.059032,HMEC@0,HSMM@0.001286,HUVEC@0,K562@0.042604,MCF7@0,NHEK@0,NHLF@0.020754,SKNSHRA@0, 0 0 0 0 ENSG00000256151.1 ENST00000542980.1 chr12:131474683-131478521 3 1274 2560 exonic -1.49 0 0,1,1 0 0,0,0 0 0 0 5.86106750392465 1.96171875 0 7.86342229199372 6.388671875 0 0 0 cat,chimp,dog,horse,human,macaque,marmoset,orangutan,panda, antisense lincRNA A549@0.610896,AG04450@0,BJ@0,GM12878@0.0228305,H1HESC@0,HELAS3@0.00183,HEPG2@0.001704,HMEC@0,HSMM@0,HUVEC@0,K562@0.144747,MCF7@0.031469,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000256151.1 ENST00000536673.1 chr12:131474706-131478512 2 1035 2769 exonic -1.49 0 0,1,1 0 0,0,0 0 0 0 5.02028985507246 2.63380281690141 0 5.68792270531401 7.49404117009751 0 0 0 cat,chimp,dog,horse,human,macaque,marmoset,orangutan,panda, antisense lincRNA A549@0.610896,AG04450@0,BJ@0,GM12878@0.0228305,H1HESC@0,HELAS3@0.00183,HEPG2@0.001704,HMEC@0,HSMM@0,HUVEC@0,K562@0.144747,MCF7@0.031469,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000256810.1 ENST00000535370.1 chr12:131515115-131520032 2 566 4349 intronic 2.94 0 0,0,0 0 0,0,0 0 0 0 0 0 0 0 5.47896068061623 19.186 1 1 chimp,human,macaque,marmoset,orangutan, antisense lincRNA A549@0,AG04450@0,BJ@0,GM12878@0.051203,H1HESC@0,HELAS3@0.072378,HEPG2@0.0480235,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000204603.2 ENST00000376678.2 chr12:131649556-131697476 5 2468 45444 intergenic 16.67 0 0,0,0 0 0,1,0 0 0 0 0 0 0 0 0.121754246985301 0 0 1 chimp,human,marmoset,orangutan, lincRNA lincRNA A549@0,AG04450@0,BJ@0.0043405,GM12878@0.010193,H1HESC@0.0265115,HELAS3@0,HEPG2@0.00088,HMEC@0,HSMM@0,HUVEC@0,K562@0.0402835,MCF7@0,NHEK@0.00186467,NHLF@0,SKNSHRA@0.000919, 0 0 0 0 ENSG00000204603.2 ENST00000536191.1 chr12:131691752-131694060 3 580 1724 intergenic 0.94 0 0,0,0 0 0,1,0 0 0 0 0 0 0 0 0 0 1 1 chimp,human,macaque,marmoset,orangutan, lincRNA lincRNA A549@0,AG04450@0,BJ@0.0043405,GM12878@0.010193,H1HESC@0.0265115,HELAS3@0,HEPG2@0.00088,HMEC@0,HSMM@0,HUVEC@0,K562@0.0402835,MCF7@0,NHEK@0.00186467,NHLF@0,SKNSHRA@0.000919, 0 0 0 0 ENSG00000248703.2 ENST00000508505.2 chr12:131780655-131782517 2 1313 547 intergenic 4.62 0 0,0,0 0 0,0,0 0 0 0 0 0 0 0 0 22.1 0 0 horse,human,macaque,orangutan, lincRNA lincRNA A549@0,AG04450@0.001791,BJ@0,GM12878@0,H1HESC@0.321954,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0.002658,K562@0,MCF7@0,NHEK@0,NHLF@0.018449,SKNSHRA@0, 0 0 0 0 ENSG00000230294.3 ENST00000428272.3 chr12:131832015-131852100 4 1789 18290 intergenic 8.17 0 1,1,1 0 0,1,0 0 1.56150902132313 0 0 0 0 32.7361654555618 11.1380535811919 0 0 0 cow,human,macaque,marmoset,orangutan, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0.00138,HELAS3@0.0025205,HEPG2@0.003268,HMEC@0,HSMM@0,HUVEC@0,K562@0.015839,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000256484.1 ENST00000539209.1 chr12:131851205-131855604 2 530 3867 intergenic 0 0 0,0,0 0 0,0,0 0 0 0 0 2.40677527799328 0 0 27.2684251357642 0 0 0 chimp,cow,horse,human,macaque,marmoset,orangutan, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000256209.1 ENST00000535133.1 chr12:131953856-131977496 3 490 23146 intergenic 2.66 0 0,0,0 0 0,0,0 0 0 0 0 0 0 0 0.125982891212304 0 0 0 chimp,horse,human,macaque,marmoset,orangutan, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0.020162,H1HESC@0.013435,HELAS3@0,HEPG2@0.011066,HMEC@0,HSMM@0,HUVEC@0,K562@0.0750105,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000256258.1 ENST00000542797.1 chr12:132106436-132107748 2 615 695 intergenic 3.07 0 0,0,0 0 0,0,0 0 0 0 8.28292682926829 8.13093525179856 0 8.45853658536585 18.3194244604317 0 0 1 chimp,human,macaque,orangutan, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0.0129115,H1HESC@0.0329065,HELAS3@0.0221335,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0.838881,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000256424.1 ENST00000537280.1 chr12:132131658-132132666 2 492 514 intergenic -0.94 0 0,0,0 0 0,0,0 0 0 0 0 0 0 0 0 0 1 1 chimp,human,macaque,marmoset,orangutan, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0.187004,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000249926.2 ENST00000508145.2 chr12:132147141-132149249 2 1559 547 intergenic 4.79 0 0,0,1 0 0,0,0 0 0 0 0 0 0 0 0 0 0 1 human,macaque,orangutan, lincRNA lincRNA A549@0,AG04450@0.0015085,BJ@0.0063085,GM12878@0,H1HESC@0.200079,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0.004478,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000255933.1 ENST00000537032.1 chr12:132241511-132242592 2 664 415 intronic 4.09 0 0,0,0 0 0,0,0 0 0 0 0 0 0 0 0 0 0 0 chimp,horse,human,macaque,marmoset,orangutan,pig, antisense lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000256955.1 ENST00000542763.1 chr12:132341965-132348596 3 280 6347 intergenic 1.21 0 0,0,0 0 0,0,0 0 0 0 0 4.33716716559004 0 45.3035714285714 34.3392153773436 27.325 0 1 chimp,human,macaque,orangutan, lincRNA lincRNA A549@0.131081,AG04450@0.0245635,BJ@0.0385925,GM12878@0,H1HESC@0.0893575,HELAS3@0.196351,HEPG2@0.268636,HMEC@0.014469,HSMM@0.0072705,HUVEC@0,K562@0.0082045,MCF7@0.694422,NHEK@0.0325873,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000255992.1 ENST00000539078.1 chr12:132409281-132413896 3 423 4188 exonic 0 0 0,1,0 0 0,0,0 0 0 0 32.2553191489362 0 33.556 41.0449172576832 16.5002387774594 41.681 1 1 chimp,human,macaque,marmoset,orangutan, antisense lincRNA A549@0.269516,AG04450@0.13393,BJ@0.142674,GM12878@0.087297,H1HESC@0.139986,HELAS3@0.530101,HEPG2@0.671006,HMEC@0.096118,HSMM@0.077731,HUVEC@0.031035,K562@0.232309,MCF7@0.437835,NHEK@0.0549293,NHLF@0.0364895,SKNSHRA@0.347863, 0 0 0 0 ENSG00000257000.1 ENST00000542422.1 chr12:132562348-132565005 2 493 2162 exonic -2.82 0 0,1,1 0 0,0,0 0 0 0 66.2251521298174 0 0 76.0608519269777 0 0 0 0 chimp,cow,horse,human,macaque,marmoset,orangutan,pig, antisense antisense A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0.0093815,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0.0045835, 0 0 0 0 ENSG00000256576.1 ENST00000538731.1 chr12:132671287-132674240 2 1475 1476 intergenic 4.41 1 1,1,1 1 0,0,0 0 0 0 8.13694915254237 0 0 25.8793220338983 0 0 0 1 chimp,human,marmoset,orangutan, lincRNA lincRNA A549@0.334824,AG04450@0.147745,BJ@0.233664,GM12878@0.0054595,H1HESC@1.46658,HELAS3@0.721929,HEPG2@0.0947695,HMEC@0.274454,HSMM@0.061522,HUVEC@0.405321,K562@0.0134865,MCF7@0.227712,NHEK@0.284537,NHLF@0.0473525,SKNSHRA@0.0030775, 0 0 0 0 ENSG00000256312.1 ENST00000535242.1 chr12:132674758-132675542 2 389 393 intergenic -0.44 0 0,1,0 0 0,0,0 0 0 0 0 0 0 0 0 0 0 1 human,macaque,orangutan, antisense lincRNA A549@0.0522125,AG04450@0.025641,BJ@0.0125935,GM12878@0,H1HESC@0.0053055,HELAS3@0.100119,HEPG2@0.0767395,HMEC@0.010472,HSMM@0,HUVEC@0,K562@0.012786,MCF7@0.0348,NHEK@0.0366407,NHLF@0.0099805,SKNSHRA@0, 0 0 0 0 ENSG00000256943.1 ENST00000543317.1 chr12:132851977-132853092 2 720 393 intronic 8.85 0 0,0,0 0 0,1,0 0 0 0 9.29444444444444 0 0 9.76111111111111 0 0 0 1 chimp,human,macaque,orangutan, antisense antisense A549@0.118013,AG04450@0,BJ@0,GM12878@0,H1HESC@0.590326,HELAS3@0.0587585,HEPG2@0.0015445,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0.100222,NHEK@0,NHLF@0.005474,SKNSHRA@0, 0 0 0 0 ENSG00000256943.1 ENST00000376617.3 chr12:132852030-132854915 3 1763 1118 intronic 8.85 0 0,0,0 0 0,1,0 0 0 0 3.79580260918888 8.82737030411449 0 3.98638684061259 28.1672629695885 0 0 1 chimp,human,macaque,orangutan, antisense antisense A549@0.118013,AG04450@0,BJ@0,GM12878@0,H1HESC@0.590326,HELAS3@0.0587585,HEPG2@0.0015445,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0.100222,NHEK@0,NHLF@0.005474,SKNSHRA@0, 0 0 0 0 ENSG00000256542.1 ENST00000537762.1 chr12:132853935-132855447 2 998 512 intronic -1.34 0 0,0,1 0 0,1,0 0 0 0 0 0 9.869 0 0 31.491 0 1 chimp,human,macaque,orangutan, antisense antisense A549@0.011556,AG04450@0,BJ@0,GM12878@0,H1HESC@0.308706,HELAS3@0.0135385,HEPG2@0.004306,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0.0160335,NHEK@0,NHLF@0.0038525,SKNSHRA@0, 0 0 0 0 ENSG00000255916.1 ENST00000537720.1 chr12:132906436-132908161 2 474 1249 intergenic 5.89 0 0,1,1 0 0,0,0 0 0 97.929 0 0 124.385 0 0 199.869 0 0 cat,human,macaque,marmoset,orangutan, antisense antisense A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0.010397,HELAS3@0.043701,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000256783.1 ENST00000542627.1 chr12:133033746-133036610 2 1033 1829 intergenic 7.01 1 0,1,0 0 0,0,0 0 0 0 0 0 0 0 0 0 0 1 human,orangutan, lincRNA lincRNA A549@0.0041945,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0.0351365,HEPG2@0.005271,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0.003973,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000256875.1 ENST00000537742.1 chr12:133038828-133039312 1 484 0 intergenic 2.32 1 0,1,0 0 0,0,0 0 0 0 0 0 0 0 0 0 0 0 cow,human,macaque,marmoset,orangutan, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0.0761195,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000204583.4 ENST00000538369.1 chr12:133179736-133181119 3 447 932 intergenic 3.10 0 0,1,1 0 0,1,1 0 0 0 33.4116331096197 1.4881974248927 14.37 20.6890380313199 1.49892703862661 16.513 0 0 chimp,dog,guinea_pig,horse,human,macaque,orangutan,panda,pig, lincRNA processed_transcript A549@0,AG04450@0.028698,BJ@0.0094805,GM12878@0,H1HESC@0.02877,HELAS3@0.004576,HEPG2@0.0091125,HMEC@0,HSMM@0.0074375,HUVEC@0.204464,K562@0,MCF7@0,NHEK@0,NHLF@0.011855,SKNSHRA@0.287763, 0 0 0 0 ENSG00000204583.4 ENST00000376608.4 chr12:133179738-133181405 4 609 1052 intergenic 10.48 0 1,1,1 0 0,1,1 0 0 0 45.6075533661741 2.29562737642586 0 39.6502463054187 2.35931558935361 18.744 0 0 chimp,cow,dog,guinea_pig,horse,human,macaque,marmoset,orangutan, lincRNA lincRNA A549@0,AG04450@0.028698,BJ@0.0094805,GM12878@0,H1HESC@0.02877,HELAS3@0.004576,HEPG2@0.0091125,HMEC@0,HSMM@0.0074375,HUVEC@0.204464,K562@0,MCF7@0,NHEK@0,NHLF@0.011855,SKNSHRA@0.287763, 0 0 0 0 ENSG00000204583.4 ENST00000545517.1 chr12:133180601-133182850 4 917 1326 intergenic 9.41 0 0,0,0 0 0,1,1 0 0 0 31.4362050163577 1.2262443438914 0 27.5452562704471 15.3785822021116 0 0 0 chimp,cow,dog,elephant,guinea_pig,horse,human,macaque,panda,pig,rat, lincRNA lincRNA A549@0,AG04450@0.028698,BJ@0.0094805,GM12878@0,H1HESC@0.02877,HELAS3@0.004576,HEPG2@0.0091125,HMEC@0,HSMM@0.0074375,HUVEC@0.204464,K562@0,MCF7@0,NHEK@0,NHLF@0.011855,SKNSHRA@0.287763, 0 0 0 0 ENSG00000204583.4 ENST00000544018.1 chr12:133180925-133186983 5 480 5570 intergenic 1.84 0 0,1,1 0 0,1,1 0 0 0 42.2333333333333 0.291921005385996 0 46.83125 7.20197486535009 0 0 0 chimp,cow,elephant,horse,human,macaque,marmoset,panda,pig,rat, lincRNA lincRNA A549@0,AG04450@0.028698,BJ@0.0094805,GM12878@0,H1HESC@0.02877,HELAS3@0.004576,HEPG2@0.0091125,HMEC@0,HSMM@0.0074375,HUVEC@0.204464,K562@0,MCF7@0,NHEK@0,NHLF@0.011855,SKNSHRA@0.287763, 0 0 0 0 ENSG00000204583.4 ENST00000536100.1 chr12:133182400-133187037 2 578 4057 intergenic 12.11 0 0,1,0 0 0,1,1 0 0 0 0 0 0 0 4.86147399556322 0 1 1 chimp,human,macaque,marmoset,orangutan, lincRNA lincRNA A549@0,AG04450@0.028698,BJ@0.0094805,GM12878@0,H1HESC@0.02877,HELAS3@0.004576,HEPG2@0.0091125,HMEC@0,HSMM@0.0074375,HUVEC@0.204464,K562@0,MCF7@0,NHEK@0,NHLF@0.011855,SKNSHRA@0.287763, 0 0 0 0 ENSG00000236617.2 ENST00000424075.2 chr12:133464428-133465169 2 553 186 intronic -1.31 1 1,1,1 0 0,0,0 0 0 0 0 0 80.529 0 0 86.854 0 1 chimp,human,macaque,orangutan, antisense antisense A549@0.408715,AG04450@0.152359,BJ@0.0961565,GM12878@0.315597,H1HESC@0.280356,HELAS3@0.052646,HEPG2@0.144554,HMEC@0.19182,HSMM@0.083854,HUVEC@0.198049,K562@0.0632955,MCF7@0.760794,NHEK@0.131892,NHLF@0.119103,SKNSHRA@0.262191, 0 0 0 0 ENSG00000250790.2 ENST00000503695.2 chr12:133488056-133491318 2 2753 507 intergenic 0.23 0 0,0,0 0 0,0,0 0 0 0 0 0 0 0 0 0 0 1 chimp,human,orangutan, lincRNA lincRNA A549@0.001576,AG04450@0.0532035,BJ@0.109754,GM12878@0.106834,H1HESC@0.137353,HELAS3@0,HEPG2@0,HMEC@0.060936,HSMM@0.0551805,HUVEC@0.0867555,K562@0.0085255,MCF7@0.362927,NHEK@0.112785,NHLF@0.112984,SKNSHRA@0.254259, 0 0 0 0 ENSG00000246394.2 ENST00000443154.3 chr12:133609245-133613808 3 1148 3411 intergenic -5.91 0 0,0,0 0 0,0,0 0 17.8686602169452 0 0 23.6628554676048 0 279.141114982578 136.034300791557 0 1 1 chimp,human,macaque,marmoset,orangutan, lincRNA lincRNA A549@0,AG04450@0.004092,BJ@0.005623,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0.0088715,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0.0078985, 0 0 0 0 ENSG00000231238.1 ENST00000448748.1 chr13:19114637-19124837 2 839 9359 intergenic 5.91 1 0,1,0 0 0,0,0 0 0 0 0 5.78961427502938 0 0 6.55839299070414 0 0 0 chimp,horse,human,macaque,marmoset, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000230473.1 ENST00000456756.1 chr13:19174124-19187652 2 414 13112 intergenic 2.20 0 0,0,0 0 0,0,0 0 0 0 0 0 0 0 44.6652684563758 0 0 0 chimp,human,macaque,orangutan, processed_transcript processed_transcript A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000229788.1 ENST00000412714.1 chr13:19184438-19185815 2 661 714 intergenic 8.87 0 0,0,1 0 0,0,0 0 0 0 0 0 0 146.81845688351 0 0 0 0 cat,chimp,dog,human,macaque,orangutan, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000231914.1 ENST00000422609.1 chr13:19246967-19250303 2 456 2878 intergenic 0.69 0 0,0,0 0 0,0,0 0 0 0 0 15.6289089645587 167.988 0 22.6233495482974 166.034 0 0 cat,chimp,cow,human,macaque,marmoset,orangutan, lincRNA lincRNA A549@0,AG04450@0.014081,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0.013169,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000236169.1 ENST00000444605.1 chr13:19292907-19293869 2 428 532 intergenic -10.40 0 0,0,0 0 0,0,0 198.967289719626 37.2857142857143 0 597.766355140187 148.165413533835 0 614.768691588785 152.37969924812 0 0 0 cat,chimp,cow,dog,elephant,guinea_pig,horse,human,macaque,marmoset,mouse,opossum,orangutan,panda,pig,rabbit,rat, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000236092.2 ENST00000453176.1 chr13:19312245-19317477 6 1273 3949 intergenic 4.02 1 0,0,1 0 0,0,0 0 0 0 0 0 0 0 0 9 0 0 chimp,human,marmoset,orangutan, processed_transcript processed_transcript A549@0.059535,AG04450@0,BJ@0,GM12878@0.003152,H1HESC@0,HELAS3@0.03364,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0.0998965,MCF7@0.081344,NHEK@0.0227453,NHLF@0.051379,SKNSHRA@0.0663495, 0 0 0 0 ENSG00000227332.1 ENST00000418741.1 chr13:19433967-19434882 2 487 426 intergenic -3.95 0 0,0,0 0 0,0,0 0 0 0 0 0 0 0 0 0 0 0 cat,chimp,dog,elephant,horse,human,macaque,marmoset,orangutan, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0.0697565,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000226250.1 ENST00000447784.1 chr13:19479579-19481950 4 556 1809 intergenic 0.87 0 0,0,0 0 0,0,0 0 0 0 0 0 0 0 0 0 0 0 chimp,human,macaque,orangutan, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0.0083715,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000231358.1 ENST00000422082.1 chr13:19496029-19497905 2 744 1130 intergenic -2.81 0 0,0,0 0 0,0,0 0 0 0 0 0 0 0 0 0 0 0 chimp,dog,guinea_pig,human,macaque,marmoset,orangutan, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0.024364,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0.0030415, 0 0 0 0 ENSG00000232685.2 ENST00000542070.1 chr13:19582399-19586157 4 1514 2238 intergenic 6.22 0 0,0,0 0 0,0,0 0 0 0 0 0 0 0 0 0 1 1 chimp,human,macaque,marmoset,orangutan, antisense antisense A549@0,AG04450@0.002124,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000232685.2 ENST00000456737.1 chr13:19582399-19586699 4 2059 2235 intergenic 9.37 0 0,0,0 0 0,0,0 0 0 0 0 0 0 0 0 0 0 0 chimp,human,orangutan, antisense antisense A549@0,AG04450@0.002124,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000232685.2 ENST00000428086.1 chr13:19582404-19589338 4 2285 4643 intergenic 9.37 0 0,0,0 0 0,0,0 0 0 0 0 0 0 0 0 0 0 0 chimp,human,macaque,marmoset,orangutan, antisense antisense A549@0,AG04450@0.002124,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000226619.1 ENST00000450212.1 chr13:19601977-19602841 2 197 665 intronic -4.45 0 0,1,0 0 0,0,0 0 0 0 0 0 0 0 0 42.038 0 0 chimp,human,macaque,orangutan, antisense antisense A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000232243.1 ENST00000428785.1 chr13:19836937-19837285 1 348 0 intergenic -12.86 1 0,0,0 0 0,0,0 0 0 0 0 0 0 0 0 0 0 0 cat,chimp,cow,dog,elephant,guinea_pig,horse,human,macaque,marmoset,orangutan,pig,rabbit, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0.00514,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000232243.1 ENST00000437057.1 chr13:19836937-19838013 3 397 675 intergenic -6.51 1 0,0,0 0 0,0,0 0 0 0 0 0 0 0 0 0 0 0 cat,chimp,cow,dog,elephant,horse,human,macaque,marmoset,orangutan,pig,rabbit, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0.00514,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000236834.1 ENST00000413833.1 chr13:19919189-19920889 2 1052 646 intergenic 9.98 1 0,0,0 0 0,0,0 0 0 0 0 0 0 95.6264258555133 44.1656346749226 0 0 0 chimp,cow,dog,horse,human,marmoset,orangutan, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000230057.1 ENST00000442144.1 chr13:19978749-19979239 2 278 210 intergenic -5.72 0 0,0,1 0 0,0,0 0 0 0 0 0 0 42.4352517985612 0 0 0 0 chimp,human,macaque,marmoset,orangutan, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000229791.1 ENST00000443554.1 chr13:19982182-19983669 2 1057 428 intergenic 2.95 1 0,0,0 0 0,0,0 0 0 0 0 0 0 0 0 0 0 0 chimp,human,macaque,marmoset,orangutan, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0.007883,HEPG2@0,HMEC@0.139194,HSMM@0.047889,HUVEC@0,K562@0.349596,MCF7@0,NHEK@0.0409823,NHLF@0.0586525,SKNSHRA@0, 19 4 0 0 ENSG00000225316.1 ENST00000438640.1 chr13:20161258-20162490 2 420 810 intergenic -8.22 0 0,1,0 0 0,0,0 0 0 0 0 11.4814814814815 0 0 11.8259259259259 0 0 0 cat,chimp,dog,human,macaque,marmoset,orangutan,panda,pig,rabbit, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0.080409,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000226352.1 ENST00000423023.1 chr13:20248764-20250024 2 374 884 intergenic -3.72 0 0,0,0 0 0,0,0 0 0 0 0 0 0 0 0 0 0 0 chimp,horse,human,macaque,marmoset,orangutan, processed_transcript processed_transcript A549@0.05465,AG04450@0.065775,BJ@0.0772865,GM12878@0.209976,H1HESC@0.089579,HELAS3@0.0823895,HEPG2@0.0754795,HMEC@0,HSMM@0.0518085,HUVEC@0,K562@0.141517,MCF7@0.114977,NHEK@0.083621,NHLF@0.0070425,SKNSHRA@0.135599, 0 0 0 0 ENSG00000237644.1 ENST00000426340.1 chr13:20252830-20253837 2 261 744 intergenic -7.99 0 0,1,0 0 0,0,0 0 0 0 0 0 1.275 0 0 5.408 0 0 chimp,human,macaque,marmoset,orangutan, antisense antisense A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000223576.1 ENST00000422148.1 chr13:20417276-20417812 2 434 100 intronic -11.25 0 0,0,0 0 0,0,0 0 0 0 0 0 0 0 0 0 0 0 chimp,human,macaque, antisense antisense A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000230625.1 ENST00000421863.1 chr13:20651665-20653696 2 548 1481 intronic -22.12 0 0,1,0 0 0,0,0 0 0 0 0 0 3.682 0 0 3.808 0 0 chimp,horse,human,macaque,marmoset,orangutan, sense_intronic sense_intronic A549@0.0579135,AG04450@0.0709025,BJ@0,GM12878@0.115083,H1HESC@0.0839215,HELAS3@0.006685,HEPG2@0.0495905,HMEC@0,HSMM@0,HUVEC@0.0814225,K562@0.06499,MCF7@0.0063565,NHEK@0.0341523,NHLF@0,SKNSHRA@0.110917, 0 0 0 0 ENSG00000236076.1 ENST00000455848.1 chr13:20676840-20677369 2 429 98 intergenic -3.68 0 0,0,0 0 0,0,0 0 0 0 0 0 0 6.82284382284382 0 0 0 0 chimp,dog,elephant,horse,human,macaque,marmoset,mouse,orangutan,panda, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0.0123225,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0.0756383,NHLF@0,SKNSHRA@0.14058, 0 0 0 0 ENSG00000241831.1 ENST00000424329.1 chr13:21512703-21523567 6 745 10109 intergenic 4.82 0 0,0,0 0 0,0,0 0 0 0 0 1.13631417548719 0 94.8818791946309 55.2561084182412 113.811 0 0 chimp,human,macaque,marmoset,orangutan,rat, processed_transcript processed_transcript A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000233851.1 ENST00000422510.1 chr13:21579296-21592261 2 630 12333 intronic -11.39 0 0,1,0 0 0,0,0 0 5.37030730560285 0 0 5.28662936836131 0 0 10.0886240168653 0 0 0 chimp,horse,human,macaque,marmoset,orangutan,panda, antisense antisense A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000233405.1 ENST00000443719.1 chr13:21808707-21809343 2 403 231 intergenic 3.28 0 0,0,0 0 0,0,0 0 0 0 0 0 4.734 27.0992555831265 0 4.77 0 0 cat,chimp,dog,elephant,guinea_pig,horse,human,macaque,marmoset,orangutan,panda,rabbit,rat, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000239501.1 ENST00000427890.1 chr13:21834168-21867568 7 614 32774 intergenic 10.82 0 0,1,0 0 0,0,0 0 1.38554952096174 0 17.5162866449511 13.1551229633246 0 282.00651465798 94.5172392750351 134.462 0 0 chimp,human,mouse,orangutan, processed_transcript processed_transcript A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000229137.1 ENST00000453309.1 chr13:21861545-21868997 2 675 6775 intergenic 2.68 0 0,0,0 0 0,0,0 0 0 0 0 0 0 7.6 138.789372693727 358.989 0 0 chimp,human,macaque,orangutan, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000244054.1 ENST00000424756.1 chr13:21872278-21878694 3 344 6068 intergenic 0 0 0,1,0 1 0,0,0 0 0 0 0 0 0 312.962209302326 24.3607448912327 0 0 0 chimp,elephant,human,marmoset,opossum,orangutan, processed_transcript processed_transcript A549@0.0316535,AG04450@0.103224,BJ@0.0913875,GM12878@0.0685355,H1HESC@0.048116,HELAS3@0.012029,HEPG2@0.0098825,HMEC@0.010423,HSMM@0,HUVEC@0.007007,K562@0.049163,MCF7@0.005794,NHEK@0.0319983,NHLF@0.0232965,SKNSHRA@0.0792145, 0 0 0 0 ENSG00000246151.1 ENST00000500111.1 chr13:21872480-21876009 2 3403 124 intergenic 0.62 0 0,1,1 0 0,0,0 0 0 0 0 0 0 70.17396414928 0 0 0 1 chimp,human,orangutan, lincRNA lincRNA A549@0,AG04450@0,BJ@0.0105935,GM12878@0.004654,H1HESC@0.0101195,HELAS3@0.012239,HEPG2@0.0073625,HMEC@0,HSMM@0.005356,HUVEC@0.017851,K562@0,MCF7@0.0009015,NHEK@0.00115033,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000224429.1 ENST00000434601.1 chr13:21877651-21922860 8 1171 44024 intergenic 2.27 0 0,0,1 0 0,0,0 0 2.93192349627476 0 5.29547395388557 4.10900872251499 96.92 6.22801024765158 36.4724014174087 130.287 0 0 chimp,human,macaque,marmoset, lincRNA lincRNA A549@0.0204755,AG04450@0,BJ@0,GM12878@0.172433,H1HESC@0.002099,HELAS3@0,HEPG2@0.010746,HMEC@0,HSMM@0,HUVEC@0.0086545,K562@0,MCF7@0.0101305,NHEK@0.00568333,NHLF@0,SKNSHRA@0.0068455, 0 0 0 0 ENSG00000224429.1 ENST00000423575.1 chr13:21897408-21918984 3 696 20876 intergenic -1.76 0 0,1,0 0 0,0,0 0 0.892412339528645 0 0 3.57118221881587 0 6.49137931034483 4.37593408698985 0 0 0 chimp,dog,horse,human,macaque,marmoset, lincRNA lincRNA A549@0.0204755,AG04450@0,BJ@0,GM12878@0.172433,H1HESC@0.002099,HELAS3@0,HEPG2@0.010746,HMEC@0,HSMM@0,HUVEC@0.0086545,K562@0,MCF7@0.0101305,NHEK@0.00568333,NHLF@0,SKNSHRA@0.0068455, 0 0 0 0 ENSG00000224429.1 ENST00000411525.1 chr13:21899764-21922860 5 659 22429 intergenic 1.79 0 0,0,0 0 0,0,0 0 0.83062107093495 0 9.40971168437026 3.24432654153105 96.92 11.0667678300455 4.03785277988319 130.287 0 0 chimp,human,macaque,marmoset,orangutan, lincRNA lincRNA A549@0.0204755,AG04450@0,BJ@0,GM12878@0.172433,H1HESC@0.002099,HELAS3@0,HEPG2@0.010746,HMEC@0,HSMM@0,HUVEC@0.0086545,K562@0,MCF7@0.0101305,NHEK@0.00568333,NHLF@0,SKNSHRA@0.0068455, 0 0 0 0 ENSG00000227146.1 ENST00000429933.1 chr13:21947808-21950797 2 728 2259 exonic -9.37 0 0,0,0 0 0,0,0 72.5425824175824 19.8326693227092 226.776 54.3626373626374 34.912793271359 242.156 37.0082417582418 39.8393094289509 227.23 0 0 cat,chimp,cow,dog,elephant,guinea_pig,horse,human,macaque,marmoset,mouse,orangutan,panda,rabbit, antisense antisense A549@0,AG04450@0.0221155,BJ@0.00663,GM12878@0.030761,H1HESC@0.010766,HELAS3@0.009605,HEPG2@0.0178205,HMEC@0,HSMM@0,HUVEC@0,K562@0.007098,MCF7@0.005633,NHEK@0.00180867,NHLF@0.0052865,SKNSHRA@0.0031135, 0 0 0 0 ENSG00000236953.1 ENST00000417513.1 chr13:21951116-21952013 2 438 457 intronic 0 0 0,0,0 0 0,0,0 0 0 47.124 0 0 74.676 5.73059360730594 125.166301969365 75.278 0 0 chimp,horse,human,macaque,marmoset,orangutan, sense_intronic sense_intronic A549@0,AG04450@0.0079965,BJ@0.0102625,GM12878@0.0272405,H1HESC@0,HELAS3@0,HEPG2@0.0232065,HMEC@0,HSMM@0,HUVEC@0.0187395,K562@0.0279895,MCF7@0,NHEK@0.0138123,NHLF@0,SKNSHRA@0.037322, 0 0 0 0 ENSG00000226722.1 ENST00000413124.1 chr13:22446909-22450817 3 1620 2284 intergenic 0.31 0 0,0,0 0 0,0,0 0 16.8730297723292 0 1.99012345679012 33.3471978984238 0 2.12654320987654 43.6444833625219 0 0 0 chimp,human,macaque,marmoset,orangutan,panda, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000231330.2 ENST00000413646.2 chr13:22615114-22850663 2 2410 233137 intergenic 1.60 0 0,1,1 1 0,0,0 0 13.9352397946272 0 0 16.3317877471187 0 0 19.6613493353693 8.991 0 0 chimp,dog,elephant,horse,human,macaque,marmoset,panda,rabbit, lincRNA lincRNA A549@0.381468,AG04450@0.079884,BJ@0,GM12878@1.14308,H1HESC@1.04131,HELAS3@0.0011005,HEPG2@0,HMEC@0,HSMM@0.001065,HUVEC@0.001248,K562@0.158907,MCF7@0,NHEK@0.104123,NHLF@0.008505,SKNSHRA@0, 0 0 0 0 ENSG00000231330.2 ENST00000456886.2 chr13:22784424-22850657 2 2138 64093 intergenic 1.60 0 0,1,1 0 0,0,0 0 19.2220367278798 156.267 0 22.139469208806 179.54 0 29.5616369962398 155.056 0 0 chimp,dog,elephant,horse,human,macaque,marmoset,orangutan,panda,rabbit, lincRNA lincRNA A549@0.381468,AG04450@0.079884,BJ@0,GM12878@1.14308,H1HESC@1.04131,HELAS3@0.0011005,HEPG2@0,HMEC@0,HSMM@0.001065,HUVEC@0.001248,K562@0.158907,MCF7@0,NHEK@0.104123,NHLF@0.008505,SKNSHRA@0, 0 0 0 0 ENSG00000229556.1 ENST00000445646.1 chr13:23426135-23426991 2 531 323 intergenic -8.03 0 0,0,0 0 0,0,0 0 0 0 0 0 0 44.0169491525424 0 0 0 0 cat,chimp,cow,dog,elephant,guinea_pig,horse,human,macaque,marmoset,mouse,opossum,orangutan,panda,pig,rabbit,rat, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000248788.1 ENST00000379093.3 chr13:23429412-23490508 4 2997 58093 intergenic 1.03 0 0,1,0 0 0,0,0 0 0.231008899523178 0 0 3.59864355430086 0 120.666332999666 15.3084881138864 193.63 0 1 chimp,human,marmoset,orangutan, lincRNA lincRNA A549@0.0032875,AG04450@0,BJ@0.0021565,GM12878@0.010653,H1HESC@0.0159705,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0.0086615,HUVEC@0,K562@0.006703,MCF7@0.008085,NHEK@0.000864333,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000250943.1 ENST00000515722.1 chr13:23477402-23493348 4 2765 13175 intergenic -6.98 0 0,0,0 0 0,0,0 0 0 0 0 0 0 14.2112115732369 47.49889943074 0 0 0 chimp,cow,dog,elephant,guinea_pig,human,macaque,marmoset,opossum,orangutan,panda,pig,rat, lincRNA lincRNA A549@0.0317705,AG04450@0.001619,BJ@0,GM12878@0.679482,H1HESC@0.109143,HELAS3@0,HEPG2@0.0008795,HMEC@0,HSMM@0.006036,HUVEC@0.0031185,K562@0.219137,MCF7@0.099537,NHEK@0.0124777,NHLF@0.002098,SKNSHRA@0.001004, 0 0 0 0 ENSG00000229483.1 ENST00000414345.1 chr13:23743974-23744736 2 262 498 intergenic 0.94 0 0,1,0 0 0,0,0 0 0 0 0 0 0 0 0 0 0 0 chimp,horse,human,macaque,marmoset,orangutan, lincRNA lincRNA A549@0,AG04450@0.012214,BJ@0.0091665,GM12878@0,H1HESC@0.011024,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0.0103245,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000229558.1 ENST00000443092.1 chr13:23993110-24002818 2 2042 7664 intronic 3.88 0 0,1,1 0 0,0,0 0 0 0 5.21498530852106 0 0 5.55386875612145 361.861038622129 0 0 0 chimp,dog,guinea_pig,human,macaque,orangutan, lincRNA lincRNA A549@0.0168505,AG04450@0.0640785,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0.0266075,HUVEC@0.07804,K562@0,MCF7@0,NHEK@0.00241967,NHLF@0,SKNSHRA@0.076924, 0 0 0 0 ENSG00000232977.1 ENST00000443778.1 chr13:24044186-24060449 3 395 15864 intergenic 0 0 0,0,0 0 0,0,0 0 7.62027231467474 0 22.6556962025316 3.90563540090772 9.724 23.3721518987342 5.21514120020171 12.27 0 0 chimp,cow,dog,horse,human,macaque,marmoset,mouse,orangutan,panda,pig,rat, lincRNA processed_transcript A549@0.0565155,AG04450@1.69209,BJ@2.93489,GM12878@0.144149,H1HESC@0.059735,HELAS3@0,HEPG2@0.021413,HMEC@0,HSMM@0.229131,HUVEC@0.0122185,K562@0,MCF7@0.030538,NHEK@0,NHLF@1.52602,SKNSHRA@0.246445, 0 0 0 0 ENSG00000227893.1 ENST00000425800.1 chr13:24072935-24077013 2 550 3526 intergenic -5.61 0 0,0,0 0 0,0,0 0 11.005955757232 0 0 13.3431650595576 1.673 0 17.539421440726 0 0 0 chimp,human,macaque,marmoset,orangutan, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 1 96 0 0 ENSG00000205861.7 ENST00000382133.4 chr13:24463028-24466243 4 801 2408 exonic 5.00 1 1,1,1 1 0,0,1 97.6029962546816 14.8525747508306 0 174.468164794007 37.0901162790698 0 219.503121098627 39.7093023255814 0 0 0 cat,chimp,cow,dog,elephant,guinea_pig,horse,human,macaque,marmoset,mouse,opossum,orangutan,panda,pig,rabbit,rat, antisense antisense A549@0.221783,AG04450@0.608872,BJ@0.15995,GM12878@0.336286,H1HESC@0.499335,HELAS3@0.553087,HEPG2@0.195012,HMEC@0.707732,HSMM@0.428337,HUVEC@0.004986,K562@0.041714,MCF7@0.212457,NHEK@0.423315,NHLF@3.46088,SKNSHRA@0.0631355, 0 0 0 0 ENSG00000205861.7 ENST00000435039.2 chr13:24463592-24466242 4 697 1947 exonic 0.23 1 1,1,1 1 0,0,1 112.166427546628 0 35.765 181.388809182209 34.7380585516179 34.996 214.513629842181 44.9455572675912 34.441 0 0 cat,chimp,cow,dog,elephant,guinea_pig,horse,human,macaque,marmoset,mouse,opossum,orangutan,panda,pig,rabbit,rat, antisense antisense A549@0.221783,AG04450@0.608872,BJ@0.15995,GM12878@0.336286,H1HESC@0.499335,HELAS3@0.553087,HEPG2@0.195012,HMEC@0.707732,HSMM@0.428337,HUVEC@0.004986,K562@0.041714,MCF7@0.212457,NHEK@0.423315,NHLF@3.46088,SKNSHRA@0.0631355, 0 0 0 0 ENSG00000205861.7 ENST00000417034.1 chr13:24465598-24471402 2 466 5336 exonic 3.10 1 0,0,0 0 0,0,1 0 14.6514242878561 0 104.495708154506 28.1896551724138 54.646 585.517167381974 35.5264242878561 60.803 0 0 cat,chimp,dog,elephant,guinea_pig,horse,human,macaque,marmoset,orangutan,panda,pig,rabbit,rat, antisense antisense A549@0.221783,AG04450@0.608872,BJ@0.15995,GM12878@0.336286,H1HESC@0.499335,HELAS3@0.553087,HEPG2@0.195012,HMEC@0.707732,HSMM@0.428337,HUVEC@0.004986,K562@0.041714,MCF7@0.212457,NHEK@0.423315,NHLF@3.46088,SKNSHRA@0.0631355, 0 0 0 0 ENSG00000196593.4 ENST00000442969.1 chr13:24513696-24520921 4 2792 4427 intergenic 9.16 0 0,0,1 0 0,0,0 0 0 0 0 0 0 176.443767908309 1.8244861079738 665 0 0 chimp,human,orangutan, lincRNA lincRNA A549@0.0015525,AG04450@0.0016035,BJ@0.0008655,GM12878@0.0093575,H1HESC@0.006851,HELAS3@0.000836,HEPG2@0.00381,HMEC@0,HSMM@0,HUVEC@0.00191,K562@0.076298,MCF7@0.027908,NHEK@0.00400167,NHLF@0,SKNSHRA@0.011794, 0 0 0 0 ENSG00000196593.4 ENST00000420143.1 chr13:24515108-24520363 5 636 4611 intergenic -9.46 0 0,1,1 0 0,0,0 0 0 0 0 0 0 156.62893081761 6.36673172847538 665 0 0 chimp,cow,dog,guinea_pig,human,macaque,marmoset,orangutan,rabbit,rat, lincRNA lincRNA A549@0.0015525,AG04450@0.0016035,BJ@0.0008655,GM12878@0.0093575,H1HESC@0.006851,HELAS3@0.000836,HEPG2@0.00381,HMEC@0,HSMM@0,HUVEC@0.00191,K562@0.076298,MCF7@0.027908,NHEK@0.00400167,NHLF@0,SKNSHRA@0.011794, 0 0 0 0 ENSG00000228741.1 ENST00000439928.1 chr13:24553949-24608145 5 696 53492 intergenic 0.40 0 0,1,0 0 0,0,0 0 0.974033500336499 0 4.27586206896552 2.07236596126524 8.375 5.08620689655172 4.37033575114036 10.974 0 0 chimp,dog,horse,human,marmoset,orangutan, lincRNA processed_transcript A549@0.077809,AG04450@1.60899,BJ@1.18424,GM12878@0.079685,H1HESC@0.033686,HELAS3@0,HEPG2@0,HMEC@0.011682,HSMM@0.591089,HUVEC@0.155603,K562@0,MCF7@0.318115,NHEK@0,NHLF@1.47132,SKNSHRA@1.12509, 0 0 0 0 ENSG00000227213.1 ENST00000430733.1 chr13:24826887-24828577 3 430 1256 intronic -0.30 0 0,1,1 0 0,0,0 0 0 0 0 0 7.688 0 0 12.005 0 0 chimp,human,macaque,marmoset,orangutan, antisense antisense A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000240868.1 ENST00000449656.1 chr13:24889863-24895736 2 468 5403 exonic 1.28 1 0,0,0 0 0,1,0 94.6581196581197 24.5632056265038 61.2 94.5448717948718 22.658523042754 383.67 128.380341880342 29.9367018323154 457.467 0 0 cat,chimp,dog,elephant,horse,human,macaque,marmoset,orangutan,panda,rabbit, processed_transcript processed_transcript A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000238179.1 ENST00000416351.1 chr13:24993688-24995180 2 1068 422 exonic -1.76 1 0,0,1 0 0,0,0 0 0 0 0 0 0 0 0 0 0 0 chimp,human,macaque,marmoset,orangutan, processed_transcript processed_transcript A549@0,AG04450@0,BJ@0,GM12878@0.000411,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 19 4 0 0 ENSG00000205822.5 ENST00000453498.1 chr13:25141011-25171814 13 1697 29082 intergenic 4.71 1 0,0,1 0 0,0,0 0 0 0 57.8049499116087 3.00233821607867 0 81.9917501473188 21.527267725741 314.028 0 0 chimp,human,macaque,marmoset,orangutan, processed_transcript processed_transcript A549@0.135941,AG04450@0.056245,BJ@0.045588,GM12878@0.031866,H1HESC@0.214077,HELAS3@0.009312,HEPG2@0,HMEC@0.006423,HSMM@0.001788,HUVEC@0.017467,K562@0.001821,MCF7@0.0084425,NHEK@0.22903,NHLF@0.021153,SKNSHRA@0.126665, 0 0 0 0 ENSG00000205822.5 ENST00000440905.1 chr13:25160142-25171814 4 1271 10395 intergenic 4.60 1 0,0,1 0 0,0,0 0 0 0 0 1.03030303030303 0 0 12.7211159211159 0 0 0 chimp,human,macaque,marmoset,orangutan, processed_transcript processed_transcript A549@0.135941,AG04450@0.056245,BJ@0.045588,GM12878@0.031866,H1HESC@0.214077,HELAS3@0.009312,HEPG2@0,HMEC@0.006423,HSMM@0.001788,HUVEC@0.017467,K562@0.001821,MCF7@0.0084425,NHEK@0.22903,NHLF@0.021153,SKNSHRA@0.126665, 0 0 0 0 ENSG00000205822.5 ENST00000450973.1 chr13:25161362-25171814 5 644 9800 intergenic 4.60 1 0,0,1 0 0,0,0 0 0 0 0 0 10.71 0 12.3277551020408 11.424 0 0 cat,chimp,cow,dog,elephant,guinea_pig,horse,human,macaque,marmoset,mouse,opossum,orangutan,panda,pig,rabbit,rat, processed_transcript processed_transcript A549@0.135941,AG04450@0.056245,BJ@0.045588,GM12878@0.031866,H1HESC@0.214077,HELAS3@0.009312,HEPG2@0,HMEC@0.006423,HSMM@0.001788,HUVEC@0.017467,K562@0.001821,MCF7@0.0084425,NHEK@0.22903,NHLF@0.021153,SKNSHRA@0.126665, 0 0 0 0 ENSG00000228009.1 ENST00000420140.1 chr13:25511014-25512491 2 1057 418 intronic 4.07 0 0,0,1 0 0,0,0 0 0 0 0 0 0 0 0 0 0 0 chimp,human,macaque,marmoset,orangutan, processed_transcript processed_transcript A549@0.039759,AG04450@0.00212,BJ@0.0062755,GM12878@0.007225,H1HESC@0.05489,HELAS3@0,HEPG2@0,HMEC@0.000391,HSMM@0,HUVEC@0.002296,K562@0.036637,MCF7@0.0062375,NHEK@0.00167033,NHLF@0.0046125,SKNSHRA@0.0079025, 19 4 0 0 ENSG00000234056.1 ENST00000413501.1 chr13:25746966-25754217 4 1143 6102 intergenic 2.29 0 0,0,1 0 0,0,0 0 1.58308751229105 72.182 0 1.76679777122255 53.254 0 3.25434283841363 65.663 0 0 chimp,human,marmoset,orangutan,panda, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0.242115,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000238169.1 ENST00000457628.1 chr13:25755579-25763898 3 768 7547 intergenic -14.33 0 0,1,0 0 0,0,0 0 6.05830131177952 187.38 2.48958333333333 3.26129587915728 130.518 2.61458333333333 3.97681197826951 136.243 0 0 cat,chimp,human,macaque,marmoset,orangutan,panda, antisense antisense A549@0,AG04450@0,BJ@0,GM12878@0.421569,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000225105.1 ENST00000435725.1 chr13:25767245-25784433 2 300 16886 intergenic 5.10 0 0,1,0 0 0,0,0 0 0 0 15.09 3.40749733507047 19.794 23.34 21.8817363496388 18.84 0 0 chimp,human,macaque,marmoset, processed_transcript processed_transcript A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0.0138215,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000231983.1 ENST00000439079.1 chr13:26626414-26627523 2 433 674 intergenic 2.35 0 0,0,0 0 0,0,0 10.6581986143187 95.3338278931751 0 4.04157043879908 30.4955489614243 0 3.99538106235566 31.2967359050445 0 0 0 cat,chimp,elephant,horse,human,macaque,marmoset,orangutan,panda, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0.482793,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000237001.1 ENST00000413063.1 chr13:27212586-27215501 2 354 2559 intronic 0 0 0,0,0 0 0,0,0 0 0 39.76 11.909604519774 0 41.081 12.725988700565 0 53.515 0 0 cat,chimp,dog,elephant,horse,human,macaque,marmoset,orangutan,panda, antisense antisense A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0.0151105, 0 0 0 0 ENSG00000232162.1 ENST00000440657.1 chr13:27736992-27743272 2 266 6012 intronic 0 0 0,1,0 0 0,0,0 0 2.33616101131071 0 4.49248120300752 1.42631403858949 0 4.56766917293233 2.45508982035928 0 0 0 cat,chimp,horse,human,macaque,marmoset,orangutan,panda, antisense antisense A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000230641.1 ENST00000452222.1 chr13:27746396-27757135 2 277 10460 intergenic -3.87 0 0,1,1 0 0,0,0 0 2.73040152963671 193.984 0 1.85927342256214 260.92 0 2.1763862332696 226.013 0 0 chimp,human,marmoset,orangutan, antisense antisense A549@0.0650605,AG04450@0.0556565,BJ@0.092791,GM12878@0.0144505,H1HESC@0.0177385,HELAS3@0.116209,HEPG2@0,HMEC@0,HSMM@0.0081705,HUVEC@0,K562@0.0083225,MCF7@0,NHEK@0.033113,NHLF@0,SKNSHRA@0.091372, 0 0 0 0 ENSG00000234772.1 ENST00000444744.1 chr13:27810419-27810948 2 418 109 intergenic 0 0 0,0,1 0 0,0,0 0 0 0 0 0 0 0 0 0 0 0 cat,chimp,cow,dog,guinea_pig,human,macaque,marmoset,orangutan,pig,rabbit, antisense antisense A549@0.112195,AG04450@0.0053365,BJ@0,GM12878@0.191316,H1HESC@0.12132,HELAS3@0.039722,HEPG2@0.037194,HMEC@0,HSMM@0.0152255,HUVEC@0.006358,K562@0.479392,MCF7@0.0484115,NHEK@0.0506507,NHLF@0.013937,SKNSHRA@0.0810905, 0 0 0 0 ENSG00000229609.1 ENST00000431171.1 chr13:27947485-27948503 2 578 438 intergenic -0.40 0 0,0,0 0 0,0,0 0 0 25.8 0 0 49.625 0 0 52.49 0 0 chimp,dog,horse,human,macaque,marmoset,orangutan,panda,pig, lincRNA lincRNA A549@0.0356945,AG04450@0.0038645,BJ@0,GM12878@0,H1HESC@0.193361,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0.009232,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000247381.1 ENST00000499662.1 chr13:28403906-28495541 4 1988 89641 intronic 3.80 0 0,0,0 0 0,0,0 0 9.89210294396537 0 1.80482897384306 12.6514095112727 10.686 9.61619718309859 14.1778092613871 12.318 0 1 chimp,human,marmoset,orangutan, lincRNA lincRNA A549@0,AG04450@0,BJ@0.0227435,GM12878@0.0283875,H1HESC@0,HELAS3@0.0053255,HEPG2@0.0021845,HMEC@0,HSMM@0,HUVEC@0.005362,K562@0,MCF7@0.0111055,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000246716.1 ENST00000500917.1 chr13:29293262-29299073 3 1264 4543 intergenic 6.90 0 0,0,0 0 0,0,0 0 25.0363196125908 0 1.9620253164557 33.2544574069998 8.207 59.4042721518987 209.437376183139 8.321 0 1 chimp,human,orangutan, lincRNA lincRNA A549@0.015573,AG04450@0,BJ@0.0038865,GM12878@0.003182,H1HESC@0.031612,HELAS3@0,HEPG2@0.0086115,HMEC@0.006463,HSMM@0.0266375,HUVEC@0,K562@0.0109955,MCF7@0.0097365,NHEK@0.0165153,NHLF@0,SKNSHRA@0.010757, 0 0 0 0 ENSG00000236758.1 ENST00000434779.1 chr13:29813516-29824691 2 718 10455 intronic 0.04 0 0,0,1 0 0,0,0 0 0 0 0 0.297178383548541 0 0 0.312099473935916 0 0 0 chimp,human,macaque,marmoset,orangutan,rabbit, antisense antisense A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0.007437,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000236758.1 ENST00000417624.1 chr13:29813760-29824691 3 643 10284 intronic 0.03 0 0,0,0 0 0,0,0 0 0 0 0 0.302119797744068 0 0 0.317288992609879 0 0 0 cat,dog,elephant,horse,human,macaque,marmoset,orangutan,panda, antisense antisense A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0.007437,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000236758.1 ENST00000452602.1 chr13:29813924-29824691 3 648 10115 intronic 0.03 0 0,0,0 0 0,0,0 0 0 0 0 0.307167572911518 0 0 0.32259021255561 0 0 0 cat,dog,elephant,horse,human,marmoset,orangutan,panda, antisense antisense A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0.007437,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000179141.3 ENST00000323380.3 chr13:30051033-30061887 3 730 10120 intronic 3.98 0 0,0,0 0 0,0,0 0 10.0681818181818 37.638 0 7.46521739130435 37.382 0 8.07094861660079 35.818 0 0 chimp,horse,human,macaque,marmoset,orangutan,panda, antisense antisense A549@0.015073,AG04450@0,BJ@0,GM12878@0.022001,H1HESC@0.095324,HELAS3@0.175117,HEPG2@0.129186,HMEC@0.005586,HSMM@0.027081,HUVEC@0,K562@0,MCF7@0.0221915,NHEK@0.0624417,NHLF@0,SKNSHRA@0.0154765, 0 0 0 0 ENSG00000224329.1 ENST00000453470.1 chr13:30446750-30462542 2 911 14879 intergenic 0.72 0 0,0,0 0 0,0,0 23.4906695938529 30.2846965521876 0 2.85510428100988 25.6318973049264 0 2.85510428100988 26.2062638618187 0 0 0 chimp,horse,human,macaque,orangutan,panda,pig, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000224405.1 ENST00000450264.1 chr13:30492784-30500788 2 573 7429 intergenic 0.44 0 0,1,1 0 0,0,0 0 3.41095706016961 0 45.6928446771379 8.15627944541661 0 53.7294938917976 11.6411360883026 0.729 0 0 cat,chimp,cow,dog,elephant,guinea_pig,horse,human,macaque,marmoset,panda,pig,rabbit, antisense antisense A549@0.010797,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0.015389,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0.0734265,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000224511.1 ENST00000413591.1 chr13:30677315-30683005 2 2616 3072 intergenic 8.88 1 0,1,0 0 0,0,0 21.6238532110092 12.0703125 12.152 11.9315749235474 5.80208333333333 43.55 13.5080275229358 6.13834635416667 42.904 0 0 cat,chimp,dog,human,macaque,marmoset,orangutan,panda,rabbit, lincRNA lincRNA A549@0,AG04450@0.0049065,BJ@0.0028055,GM12878@0.001887,H1HESC@0.0017375,HELAS3@0.0008925,HEPG2@0,HMEC@0.001564,HSMM@0.0008705,HUVEC@0.0009285,K562@0.0031235,MCF7@0.218835,NHEK@0.0319677,NHLF@0.001474,SKNSHRA@0.0147445, 0 0 0 0 ENSG00000224511.1 ENST00000432770.1 chr13:30681736-30683012 2 478 796 intergenic 1.45 0 0,1,1 0 0,0,0 0 0 12.152 6.84100418410042 7.80150753768844 41.261 7.30125523012552 7.17587939698493 40.461 0 0 chimp,human,macaque,marmoset,orangutan, lincRNA lincRNA A549@0,AG04450@0.0049065,BJ@0.0028055,GM12878@0.001887,H1HESC@0.0017375,HELAS3@0.0008925,HEPG2@0,HMEC@0.001564,HSMM@0.0008705,HUVEC@0.0009285,K562@0.0031235,MCF7@0.218835,NHEK@0.0319677,NHLF@0.001474,SKNSHRA@0.0147445, 0 0 0 0 ENSG00000232117.1 ENST00000437721.1 chr13:30726023-30733758 2 6850 883 intergenic 8.10 1 0,1,1 0 0,0,0 5.00671532846715 0 0 1.83795620437956 0 2.97 1.9407299270073 0 2.992 0 0 chimp,human,orangutan, lincRNA lincRNA A549@0.0090165,AG04450@0.005239,BJ@0.026807,GM12878@0.0111935,H1HESC@0.0162295,HELAS3@0.004648,HEPG2@0.000855,HMEC@0,HSMM@0.0006655,HUVEC@0.076785,K562@0.0025935,MCF7@0.0002935,NHEK@0.0159347,NHLF@0.0053875,SKNSHRA@0.0556035, 0 0 0 0 ENSG00000232643.1 ENST00000435044.1 chr13:30728203-30728723 2 372 146 intergenic 0 0 0,0,0 0 0,0,0 0 0 29.016 0 0 6.416 0 0 7.12 0 0 chimp,human,macaque,marmoset,orangutan, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000236463.1 ENST00000412722.1 chr13:30890497-30894040 2 428 3113 intergenic 1.26 1 0,0,1 0 0,0,0 16.9626168224299 5.57661419852233 0 0 9.37198843559267 0 0 22.3996145197559 5.346 0 0 chimp,cow,dog,horse,human,macaque,marmoset,orangutan,panda,pig, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0.10899,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000238121.1 ENST00000447147.1 chr13:30914407-30948036 5 1584 32037 intergenic -0.50 1 1,1,1 0 0,0,0 16.4103535353535 6.11527296563349 0 1.38825757575758 4.63857414864063 0 1.38068181818182 11.3125136560852 0 0 0 cat,chimp,dog,horse,human,macaque,marmoset,orangutan,panda, lincRNA lincRNA A549@0.0072015,AG04450@0.008201,BJ@0.0111615,GM12878@3.63746,H1HESC@0.055365,HELAS3@0.035662,HEPG2@0.033545,HMEC@0.002577,HSMM@0,HUVEC@0.307155,K562@0.003261,MCF7@0,NHEK@0.021321,NHLF@0.00358,SKNSHRA@0.0221265, 0 0 0 0 ENSG00000238121.1 ENST00000420210.1 chr13:30915496-30941804 4 504 25798 intergenic 2.77 0 0,0,0 0 0,0,0 0 6.13551438095976 0 1.51785714285714 5.07581983099465 0 1.44642857142857 12.9162725792697 0 0 0 chimp,dog,horse,human,macaque,marmoset,orangutan,panda, lincRNA lincRNA A549@0.0072015,AG04450@0.008201,BJ@0.0111615,GM12878@3.63746,H1HESC@0.055365,HELAS3@0.035662,HEPG2@0.033545,HMEC@0.002577,HSMM@0,HUVEC@0.307155,K562@0.003261,MCF7@0,NHEK@0.021321,NHLF@0.00358,SKNSHRA@0.0221265, 0 0 0 0 ENSG00000238121.1 ENST00000417079.1 chr13:30916597-30939898 5 1040 22253 intergenic 2.77 0 0,1,0 0 0,0,0 0 6.06174448388981 23.392 0.735576923076923 5.30804835303105 0 0.700961538461538 14.2299465240642 3.514 0 0 chimp,human,macaque,marmoset,orangutan,pig, lincRNA lincRNA A549@0.0072015,AG04450@0.008201,BJ@0.0111615,GM12878@3.63746,H1HESC@0.055365,HELAS3@0.035662,HEPG2@0.033545,HMEC@0.002577,HSMM@0,HUVEC@0.307155,K562@0.003261,MCF7@0,NHEK@0.021321,NHLF@0.00358,SKNSHRA@0.0221265, 0 0 0 0 ENSG00000238121.1 ENST00000429808.1 chr13:30931402-30938333 5 588 6335 intergenic 2.77 0 0,0,0 0 0,0,0 0 14.168271507498 45.136 1.30102040816327 16.3790055248619 0.992 106.852040816327 18.8981846882399 2.414 0 0 chimp,human,macaque,marmoset,orangutan, lincRNA lincRNA A549@0.0072015,AG04450@0.008201,BJ@0.0111615,GM12878@3.63746,H1HESC@0.055365,HELAS3@0.035662,HEPG2@0.033545,HMEC@0.002577,HSMM@0,HUVEC@0.307155,K562@0.003261,MCF7@0,NHEK@0.021321,NHLF@0.00358,SKNSHRA@0.0221265, 0 0 0 0 ENSG00000238121.1 ENST00000420219.1 chr13:30931879-30951282 6 1050 18343 intergenic 1.64 0 0,1,0 0 0,0,0 0 10.6806411165022 0 2.61809523809524 7.02551381998583 6.696 2.66761904761905 8.80286757891293 6.993 0 0 chimp,human,macaque,marmoset,orangutan, lincRNA lincRNA A549@0.0072015,AG04450@0.008201,BJ@0.0111615,GM12878@3.63746,H1HESC@0.055365,HELAS3@0.035662,HEPG2@0.033545,HMEC@0.002577,HSMM@0,HUVEC@0.307155,K562@0.003261,MCF7@0,NHEK@0.021321,NHLF@0.00358,SKNSHRA@0.0221265, 0 0 0 0 ENSG00000238121.1 ENST00000450327.1 chr13:30931882-30946511 4 420 14203 intergenic -0.74 0 0,0,0 0 0,0,0 0 11.1444061113849 37.631 1.82142857142857 8.79398718580581 3.968 1.73571428571429 11.0770259804267 4.144 0 0 chimp,human,macaque,marmoset,orangutan, lincRNA lincRNA A549@0.0072015,AG04450@0.008201,BJ@0.0111615,GM12878@3.63746,H1HESC@0.055365,HELAS3@0.035662,HEPG2@0.033545,HMEC@0.002577,HSMM@0,HUVEC@0.307155,K562@0.003261,MCF7@0,NHEK@0.021321,NHLF@0.00358,SKNSHRA@0.0221265, 0 0 0 0 ENSG00000238121.1 ENST00000452659.1 chr13:30937313-30947169 4 465 9385 intergenic -0.50 0 0,0,0 0 0,0,0 0 11.3115610015983 0 0 2.67533297815663 0 0 4.448694725626 0 0 0 chimp,human,macaque,marmoset,orangutan, lincRNA lincRNA A549@0.0072015,AG04450@0.008201,BJ@0.0111615,GM12878@3.63746,H1HESC@0.055365,HELAS3@0.035662,HEPG2@0.033545,HMEC@0.002577,HSMM@0,HUVEC@0.307155,K562@0.003261,MCF7@0,NHEK@0.021321,NHLF@0.00358,SKNSHRA@0.0221265, 0 0 0 0 ENSG00000238121.1 ENST00000444319.1 chr13:30944609-30948051 3 273 3165 intergenic 5.86 0 0,1,0 0 0,0,0 0 11.8897314375987 0 0 4.82464454976303 0 0 6.12922590837283 0 0 0 chimp,human,macaque,marmoset,orangutan, lincRNA lincRNA A549@0.0072015,AG04450@0.008201,BJ@0.0111615,GM12878@3.63746,H1HESC@0.055365,HELAS3@0.035662,HEPG2@0.033545,HMEC@0.002577,HSMM@0,HUVEC@0.307155,K562@0.003261,MCF7@0,NHEK@0.021321,NHLF@0.00358,SKNSHRA@0.0221265, 0 0 0 0 ENSG00000238121.1 ENST00000416261.1 chr13:30948140-30951101 3 536 2421 intergenic 1.64 0 0,1,0 0 0,0,0 0 0 0 0 0 8.68 0 0 9.065 0 0 chimp,human,macaque,marmoset,orangutan, lincRNA lincRNA A549@0.0072015,AG04450@0.008201,BJ@0.0111615,GM12878@3.63746,H1HESC@0.055365,HELAS3@0.035662,HEPG2@0.033545,HMEC@0.002577,HSMM@0,HUVEC@0.307155,K562@0.003261,MCF7@0,NHEK@0.021321,NHLF@0.00358,SKNSHRA@0.0221265, 0 0 0 0 ENSG00000225039.1 ENST00000420694.1 chr13:30993656-30996374 2 446 2270 intergenic 1.94 0 0,1,0 0 0,0,0 0 6.18061674008811 55.107 0 1.49383259911894 4.944 0 1.54801762114537 5.008 0 0 chimp,dog,horse,human,macaque,marmoset,orangutan,panda, lincRNA lincRNA A549@0.179727,AG04450@0.0354225,BJ@0.075067,GM12878@0.176314,H1HESC@0.270764,HELAS3@0.300539,HEPG2@0.0547985,HMEC@0.082258,HSMM@0.118745,HUVEC@0,K562@0.0207315,MCF7@0.022642,NHEK@0.0232883,NHLF@0.0389565,SKNSHRA@0.202003, 0 0 0 0 ENSG00000237879.1 ENST00000414407.1 chr13:31377343-31384782 2 904 6533 intergenic -5.73 0 0,0,0 0 0,0,0 0 0 15.87 0 1.49181080667381 4.844 0 1.56666156436553 6.086 0 0 chimp,human,macaque,marmoset,orangutan,pig, lincRNA lincRNA A549@0,AG04450@0.0139565,BJ@0.157554,GM12878@0.146495,H1HESC@0,HELAS3@0.0184285,HEPG2@0,HMEC@0.018078,HSMM@0.0857445,HUVEC@0.0334065,K562@0,MCF7@0,NHEK@0.014559,NHLF@0.0086145,SKNSHRA@0.015043, 0 0 0 0 ENSG00000236094.1 ENST00000440633.1 chr13:31456688-31457532 2 409 433 intergenic -0.71 1 0,0,1 0 0,0,0 74.5036674816626 104.981524249423 5.274 55.8141809290954 113.870669745958 2.39 47.7701711491443 111.131639722864 0 0 0 cat,chimp,dog,elephant,horse,human,macaque,marmoset,orangutan, lincRNA lincRNA A549@0,AG04450@0.12467,BJ@0.0827375,GM12878@0.0357345,H1HESC@6.19144,HELAS3@0,HEPG2@0.026249,HMEC@0,HSMM@0.134338,HUVEC@0.011832,K562@0,MCF7@0,NHEK@0,NHLF@0.746005,SKNSHRA@0.0602425, 0 0 0 0 ENSG00000224743.1 ENST00000451495.1 chr13:31504814-31505619 2 433 370 intergenic 0 0 0,0,0 0 0,0,0 0 52.7891891891892 0 0 137.932432432432 0 0 143.756756756757 0 0 0 cat,chimp,cow,elephant,guinea_pig,horse,human,macaque,marmoset,orangutan,panda, antisense antisense A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000228905.1 ENST00000411835.1 chr13:31505638-31506723 2 745 338 intergenic -0.03 0 0,0,0 0 0,0,0 0 0 0 0 0 12.048 0 0 13.434 0 0 chimp,human,macaque,marmoset,orangutan, antisense antisense A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000228905.1 ENST00000429200.1 chr13:31505766-31506337 2 398 171 intergenic -4.43 0 0,0,0 0 0,0,0 0 0 0 0 0 12.048 0 0 11.976 0 0 chimp,horse,human,macaque,orangutan, antisense antisense A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000238185.1 ENST00000433788.1 chr13:31547426-31551760 3 334 3996 exonic -6.33 0 0,0,1 0 0,0,0 0 0 0 31.7724550898204 0.566566566566567 4.216 36.6946107784431 1.2474974974975 4.267 0 0 chimp,dog,human,macaque,marmoset,mouse,orangutan,pig, antisense antisense A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000230403.1 ENST00000415283.1 chr13:31569299-31570275 2 397 577 intergenic -7.17 0 0,0,0 0 0,0,0 46.7254408060453 0 0 15.7783375314861 0 3.107 16.7909319899244 0 3.263 0 0 cat,chimp,cow,dog,elephant,guinea_pig,horse,human,macaque,marmoset,orangutan,panda,pig, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000229715.3 ENST00000428783.1 chr13:32420978-32527609 4 1305 105320 intergenic 57.38 1 0,1,1 1 0,0,0 57.7287356321839 9.03202620584884 0 64.1264367816092 8.35338966957842 26.744 450.07816091954 10.5594189137866 34.971 0 0 cat,chimp,cow,dog,elephant,guinea_pig,horse,human,macaque,marmoset,mouse,opossum,orangutan,pig,platypus,rabbit,rat, lincRNA lincRNA A549@0.008531,AG04450@0.0872515,BJ@0.237986,GM12878@0.257962,H1HESC@0.201524,HELAS3@0.0917235,HEPG2@0.0146175,HMEC@0.018768,HSMM@0.400591,HUVEC@0.0117945,K562@0.0020455,MCF7@0.0271255,NHEK@0.0366007,NHLF@0.056118,SKNSHRA@0.109744, 0 0 0 0 ENSG00000229715.3 ENST00000490410.1 chr13:32524296-32527578 1 3282 0 intergenic 57.38 1 0,0,1 0 0,0,0 3.02254722730043 0 18.761 4.02132845825716 0 0 156.044180377818 0 0 0 0 chimp,human,macaque,marmoset,orangutan, lincRNA lincRNA A549@0.008531,AG04450@0.0872515,BJ@0.237986,GM12878@0.257962,H1HESC@0.201524,HELAS3@0.0917235,HEPG2@0.0146175,HMEC@0.018768,HSMM@0.400591,HUVEC@0.0117945,K562@0.0020455,MCF7@0.0271255,NHEK@0.0366007,NHLF@0.056118,SKNSHRA@0.109744, 0 0 0 0 ENSG00000235822.1 ENST00000441659.1 chr13:32559822-32565134 2 147 5163 intergenic 0 0 0,0,0 0 0,0,0 0 16.6163083478598 20.24 0 4.96165020337013 22.816 6.61224489795918 10.2767770675964 23.828 0 0 chimp,cow,human,macaque,marmoset,orangutan,panda,rabbit, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0.013529,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000237637.1 ENST00000428419.1 chr13:32599451-32605776 4 1111 5208 exonic 0.88 0 1,1,1 1 0,0,0 16.1296129612961 37.0407066052227 270.291 35.1323132313231 12.598886328725 221.887 27.1431143114311 15.5506912442396 237.334 0 0 cat,chimp,horse,human,macaque,marmoset,orangutan, lincRNA processed_transcript A549@0.0058405,AG04450@0.050469,BJ@0.189889,GM12878@0.0078205,H1HESC@0.0938985,HELAS3@0.133059,HEPG2@0.42042,HMEC@0.007345,HSMM@0.0020445,HUVEC@0.0067565,K562@0,MCF7@0.0072125,NHEK@0,NHLF@0.0069805,SKNSHRA@0.0523775, 0 0 0 0 ENSG00000230633.1 ENST00000418076.1 chr13:32872291-32872849 2 435 121 intergenic -2.16 0 0,0,0 0 0,0,0 0 0 14.579 0 0 0 0 0 0 0 0 chimp,guinea_pig,horse,human,macaque,orangutan,panda,rabbit, antisense antisense A549@0,AG04450@1.64441,BJ@1.53697,GM12878@0.05254,H1HESC@0.166541,HELAS3@0.0638035,HEPG2@0.655848,HMEC@0,HSMM@0.436787,HUVEC@0.653759,K562@0,MCF7@0,NHEK@0.003021,NHLF@0.186438,SKNSHRA@0.602092, 0 0 0 0 ENSG00000230905.1 ENST00000450112.1 chr13:33066436-33072629 3 3510 2679 intronic -1.12 0 0,0,1 0 0,0,0 0 0 0 1.83846153846154 1.87346024636058 0 1.91481481481481 1.96752519596865 0 0 0 human,macaque,orangutan, sense_intronic sense_intronic A549@0.0286865,AG04450@0.122267,BJ@0.112121,GM12878@0.196015,H1HESC@0.085875,HELAS3@0.0908925,HEPG2@0.148309,HMEC@0.007746,HSMM@0.005837,HUVEC@0.19197,K562@0.150292,MCF7@0.031789,NHEK@0.264119,NHLF@0.0262685,SKNSHRA@0.132662, 0 0 0 0 ENSG00000226968.1 ENST00000421002.1 chr13:33451569-33485788 4 899 33314 intergenic 2.56 0 0,0,0 0 0,0,0 9.5706340378198 10.0077144743952 0 8.18242491657397 6.57960617157952 0 9.03559510567297 6.31563306717896 0 0 0 cat,chimp,dog,horse,human,macaque,marmoset,orangutan,panda,pig, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0.0439955,H1HESC@0.0128915,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0.0156865,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000233226.1 ENST00000430637.1 chr13:33696713-33697797 2 599 483 intronic -2.97 0 0,0,0 0 0,0,0 72.1602671118531 0 0 124.088480801336 27.111801242236 0 140.464106844741 25.9482401656315 0 0 0 cat,chimp,cow,dog,elephant,guinea_pig,horse,human,macaque,marmoset,mouse,opossum,orangutan,panda,pig,platypus,rabbit,rat, antisense antisense A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0.010187,NHEK@0,NHLF@0,SKNSHRA@0.003775, 0 0 0 0 ENSG00000230300.1 ENST00000456087.1 chr13:33732724-33738546 2 450 5370 intronic -3.44 0 0,0,0 0 0,0,0 8.82444444444444 9.02141527001862 27.066 0.6 7.31508379888268 48.093 0 6.23296089385475 48.258 0 0 cat,chimp,cow,dog,elephant,horse,human,macaque,marmoset,panda,pig,rabbit, sense_intronic sense_intronic A549@0.0077175,AG04450@0.050307,BJ@0.0504415,GM12878@0.148823,H1HESC@0.0124385,HELAS3@0.062326,HEPG2@0.0085835,HMEC@0,HSMM@0,HUVEC@0.010984,K562@0,MCF7@0,NHEK@0.0132697,NHLF@0,SKNSHRA@0.0372695, 0 0 0 0 ENSG00000236581.1 ENST00000424853.1 chr13:33851690-33855471 3 543 3234 intronic 1.14 0 0,0,0 0 0,0,0 0 8.20500927643785 7.106 0 5.91682127396413 0 0 6.46536796536797 2.43 0 0 chimp,cow,dog,elephant,human,macaque,marmoset,orangutan,pig, antisense antisense A549@0.020961,AG04450@0.0226555,BJ@0.013106,GM12878@0,H1HESC@0,HELAS3@0.0126995,HEPG2@0.0172375,HMEC@0,HSMM@0.0765895,HUVEC@0.048908,K562@0,MCF7@0,NHEK@0.063605,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000227911.1 ENST00000443576.1 chr13:33907983-33909403 2 464 954 intronic -4.13 0 0,0,0 0 0,0,0 0 0 0 0 0 0 0 0 0 0 0 chimp,human,macaque,marmoset,orangutan, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000230490.1 ENST00000454681.1 chr13:33929343-34250905 6 838 320714 intergenic 0.09 0 0,1,0 0 0,0,0 60.8699284009546 5.37997093984048 337.288 32.7708830548926 6.06094214783265 300.583 43.1980906921241 7.65085403194123 370.42 0 0 chimp,elephant,guinea_pig,human,macaque,marmoset,opossum,orangutan,pig, lincRNA lincRNA A549@0.003678,AG04450@0.0153965,BJ@0.0068165,GM12878@0.008681,H1HESC@0,HELAS3@0.037055,HEPG2@0.073261,HMEC@0,HSMM@0.0156795,HUVEC@0,K562@0,MCF7@0.08186,NHEK@0.0108463,NHLF@0.002286,SKNSHRA@0, 0 0 0 0 ENSG00000230490.1 ENST00000437698.1 chr13:34085467-34098459 3 352 12636 intergenic -1.60 0 0,0,0 0 0,0,0 62.8409090909091 12.5685343463121 4.2 52.6590909090909 11.7279202279202 0 60.0482954545455 13.9181703070592 0 0 0 cat,chimp,cow,dog,elephant,guinea_pig,horse,human,macaque,marmoset,mouse,opossum,orangutan,panda,pig,rabbit,rat, lincRNA lincRNA A549@0.003678,AG04450@0.0153965,BJ@0.0068165,GM12878@0.008681,H1HESC@0,HELAS3@0.037055,HEPG2@0.073261,HMEC@0,HSMM@0.0156795,HUVEC@0,K562@0,MCF7@0.08186,NHEK@0.0108463,NHLF@0.002286,SKNSHRA@0, 0 0 0 0 ENSG00000234535.1 ENST00000442716.1 chr13:34185104-34185659 2 383 170 intergenic -11.15 0 0,1,0 0 0,0,0 121.174934725849 97.1529411764706 4.352 130.879895561358 113.417647058824 1.932 146.206266318538 115.770588235294 3.89 0 0 cat,chimp,cow,dog,elephant,guinea_pig,horse,human,macaque,marmoset,mouse,opossum,orangutan,panda,pig,rabbit,rat, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0.327775,HEPG2@0.147758,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0.015903,NHEK@0,NHLF@0.010136,SKNSHRA@0.0144455, 0 0 0 0 ENSG00000230490.1 ENST00000445227.1 chr13:34228796-34250861 4 416 21643 intergenic -2.47 0 0,1,0 0 0,0,0 25.1466346153846 1.72526914013769 34.236 18.7764423076923 3.90597421799196 26.239 20.28125 5.22584669408123 50.194 0 0 chimp,cow,horse,human,macaque,marmoset,orangutan,pig, lincRNA lincRNA A549@0.003678,AG04450@0.0153965,BJ@0.0068165,GM12878@0.008681,H1HESC@0,HELAS3@0.037055,HEPG2@0.073261,HMEC@0,HSMM@0.0156795,HUVEC@0,K562@0,MCF7@0.08186,NHEK@0.0108463,NHLF@0.002286,SKNSHRA@0, 0 0 0 0 ENSG00000232986.1 ENST00000452207.1 chr13:34231573-34234065 3 379 2109 intergenic 0.19 0 0,0,0 0 0,0,0 0 0 0 6.06860158311346 0 0 18.401055408971 1.49786628733997 0 0 0 chimp,human,macaque,marmoset,orangutan,panda,pig, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000225179.1 ENST00000440160.1 chr13:35009587-35214822 3 391 204840 intergenic -1.59 0 0,0,0 0 0,0,0 10.1278772378517 10.9611404022652 25.694 24.4884910485933 11.3542179261863 23.492 29.4322250639386 14.559846709627 30.534 0 0 cat,chimp,cow,dog,elephant,guinea_pig,horse,human,macaque,marmoset,mouse,orangutan,panda,pig,rabbit,rat, processed_transcript processed_transcript A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000225179.1 ENST00000428706.1 chr13:35107983-35108487 2 411 91 intergenic 1.54 0 0,0,0 0 0,0,0 0 0 63.444 9.14111922141119 15.1648351648352 68.236 13.5328467153285 61.1208791208791 69.146 0 0 cat,chimp,cow,dog,elephant,guinea_pig,horse,human,macaque,marmoset,orangutan,panda,pig, processed_transcript processed_transcript A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000225474.1 ENST00000430191.1 chr13:35621967-35623401 2 501 931 intronic -0.87 0 0,0,1 0 0,0,0 0 44.7432867883996 0 0 92.6541353383459 0 0 92.5134264232009 0 0 0 chimp,cow,dog,elephant,horse,human,macaque,marmoset,orangutan,panda,pig,rabbit, antisense antisense A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000236036.1 ENST00000422430.1 chr13:36271661-36273138 2 374 1101 intergenic -1.42 1 0,0,0 0 0,0,0 37.0909090909091 0 0 65.9144385026738 0 8.206 73.4545454545455 0 8.518 0 0 chimp,human,macaque,marmoset,orangutan,rabbit, lincRNA lincRNA A549@0,AG04450@0.005015,BJ@0.015054,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0.151187,SKNSHRA@0, 0 0 0 0 ENSG00000236036.1 ENST00000456848.1 chr13:36271864-36273393 2 641 886 intergenic -1.42 1 0,0,0 0 0,0,0 132.03120124805 0 0 177.82527301092 0 8.206 169.358814352574 0 8.518 0 0 cat,chimp,elephant,guinea_pig,human,macaque,marmoset,orangutan,panda,rabbit, lincRNA lincRNA A549@0,AG04450@0.005015,BJ@0.015054,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0.151187,SKNSHRA@0, 0 0 0 0 ENSG00000236711.1 ENST00000437983.1 chr13:37423503-37424183 2 502 176 intronic -5.89 0 0,1,1 0 0,0,0 0 0 34.224 8.63545816733068 0 64.397 10.2231075697211 0 84.885 0 0 chimp,guinea_pig,horse,human,macaque,marmoset,orangutan, antisense antisense A549@0.012318,AG04450@0.015292,BJ@0.048128,GM12878@0.087013,H1HESC@0.0058965,HELAS3@0.0150145,HEPG2@0.0773745,HMEC@0,HSMM@0.0040825,HUVEC@0.0414385,K562@0.009214,MCF7@0,NHEK@0.0127963,NHLF@0,SKNSHRA@0.0597765, 0 0 0 0 ENSG00000230390.1 ENST00000414480.1 chr13:38055604-38058906 4 507 2789 intergenic -3.79 0 0,0,0 0 0,0,0 0 9.31158121190391 0 0 5.74793832915023 0 0 11.2158479741843 0 0 0 chimp,human,macaque,marmoset,orangutan,panda, lincRNA lincRNA A549@0,AG04450@0,BJ@0.004818,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0.011328,SKNSHRA@0.013343, 0 0 0 0 ENSG00000223685.1 ENST00000434565.1 chr13:38624954-38717369 6 515 91890 intergenic -0.87 0 0,0,0 0 0,0,0 0 1.85354227881162 0 0 2.96277070410273 0 0 4.22109043421482 0 0 0 chimp,human,macaque,marmoset,orangutan, lincRNA lincRNA A549@0.0301935,AG04450@0.171791,BJ@0.114427,GM12878@0.206608,H1HESC@0.055672,HELAS3@0.224326,HEPG2@0.246493,HMEC@0.063677,HSMM@0.112259,HUVEC@0.174772,K562@0.0257745,MCF7@0.0117515,NHEK@0.431914,NHLF@0.0822975,SKNSHRA@0, 0 0 0 0 ENSG00000223685.1 ENST00000454060.1 chr13:38627835-38635585 2 523 7225 intergenic -4.14 0 0,0,1 0 0,0,0 0 0 0 0 0 0 0 0 0 0 0 chimp,dog,guinea_pig,horse,human,macaque,orangutan,rabbit, lincRNA lincRNA A549@0.0301935,AG04450@0.171791,BJ@0.114427,GM12878@0.206608,H1HESC@0.055672,HELAS3@0.224326,HEPG2@0.246493,HMEC@0.063677,HSMM@0.112259,HUVEC@0.174772,K562@0.0257745,MCF7@0.0117515,NHEK@0.431914,NHLF@0.0822975,SKNSHRA@0, 0 0 0 0 ENSG00000223685.1 ENST00000451826.1 chr13:38628057-38635590 3 495 7034 intergenic -2.93 0 0,0,0 0 0,0,0 0 0 0 0 0 0 0 0 0 0 0 chimp,human,marmoset,orangutan, lincRNA lincRNA A549@0.0301935,AG04450@0.171791,BJ@0.114427,GM12878@0.206608,H1HESC@0.055672,HELAS3@0.224326,HEPG2@0.246493,HMEC@0.063677,HSMM@0.112259,HUVEC@0.174772,K562@0.0257745,MCF7@0.0117515,NHEK@0.431914,NHLF@0.0822975,SKNSHRA@0, 0 0 0 0 ENSG00000236354.1 ENST00000414161.1 chr13:39107480-39119436 2 789 11165 intergenic 0.35 0 0,0,0 0 0,0,0 0 24.0279444693238 0 6.82889733840304 14.6232870577698 0 7.09125475285171 15.3119570085087 0 0 0 chimp,human,macaque,marmoset,orangutan, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0.0026225,HELAS3@0.0067105,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0.010167,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000229437.1 ENST00000441430.1 chr13:39150777-39153131 3 432 1918 intergenic 0 0 0,0,0 0 0,0,0 0 0 0 0 0 239 0 0 259 0 0 chimp,human,macaque,marmoset,orangutan, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0.010777,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000225350.1 ENST00000448887.1 chr13:39395935-39401707 2 463 5307 intronic -2.93 0 0,0,0 0 0,0,0 0 7.27416619559073 0 5.89200863930886 6.0103636706237 0 4.19870410367171 8.1888072357264 0 0 0 cat,chimp,horse,human,macaque,marmoset,orangutan,panda,pig, antisense antisense A549@0,AG04450@0,BJ@0,GM12878@0.0285535,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000230710.1 ENST00000455241.1 chr13:40755946-40763165 4 830 6383 intergenic 4.19 0 0,0,0 0 0,0,0 0 1.57167476108413 0 7.23855421686747 12.0126899577001 4.299 7.45542168674699 12.8991070029767 4.394 0 0 chimp,elephant,human,macaque,marmoset,orangutan, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0.0024655,NHEK@0.006332,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000230058.1 ENST00000400432.3 chr13:40918094-40924440 2 442 5902 intergenic -2.76 0 0,0,0 0 0,0,0 8.11085972850679 2.55116909522196 8.36 1.56108597285068 8.44425618434429 39.45 1.59502262443439 9.30565909861064 49.594 0 0 cat,chimp,guinea_pig,horse,human,macaque,orangutan,panda, lincRNA lincRNA A549@0.03248,AG04450@0,BJ@0.0161165,GM12878@0.155824,H1HESC@0.392267,HELAS3@0.021356,HEPG2@0.034302,HMEC@0,HSMM@0,HUVEC@0,K562@0.00603,MCF7@0,NHEK@0.011894,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000215483.4 ENST00000400430.2 chr13:41025131-41055143 5 697 29307 intergenic 2.41 0 0,0,0 0 0,0,0 32.5423242467719 10.3463677619681 0 50.8378766140603 20.3451052649538 0 51.1951219512195 20.8571331081312 0 0 0 cat,chimp,cow,dog,guinea_pig,human,macaque,marmoset,mouse,orangutan,panda,rat, lincRNA lincRNA A549@0.006871,AG04450@0,BJ@0,GM12878@0,H1HESC@0.0250495,HELAS3@0.023784,HEPG2@0.021649,HMEC@0.010186,HSMM@0,HUVEC@0.003804,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000215483.4 ENST00000400431.2 chr13:41026794-41034546 2 181 7569 intergenic -0.43 0 0,0,0 0 0,0,0 0 7.26172545910953 0 0 15.0140044920069 0 0 16.0109657814771 0 0 0 cat,chimp,cow,dog,horse,human,orangutan,panda, lincRNA lincRNA A549@0.006871,AG04450@0,BJ@0,GM12878@0,H1HESC@0.0250495,HELAS3@0.023784,HEPG2@0.021649,HMEC@0.010186,HSMM@0,HUVEC@0.003804,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000215483.4 ENST00000542632.1 chr13:41032671-41040785 3 399 7711 intergenic -6.59 0 0,0,1 0 0,0,0 0 1.02710413694722 0 0 0.611075087537284 7.405 0 0.999610945402672 7.649 0 0 cat,chimp,horse,human,macaque,marmoset,orangutan, lincRNA lincRNA A549@0.006871,AG04450@0,BJ@0,GM12878@0,H1HESC@0.0250495,HELAS3@0.023784,HEPG2@0.021649,HMEC@0.010186,HSMM@0,HUVEC@0.003804,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000168852.6 ENST00000432905.1 chr13:41400485-41429127 4 742 27894 intergenic 3.58 1 0,0,0 0 0,0,0 0 0 0 43.2075471698113 1.16103821610382 7.32 70.1765498652291 1.3642360364236 23.904 0 0 cat,chimp,cow,dog,elephant,guinea_pig,horse,human,macaque,marmoset,mouse,opossum,orangutan,panda,pig,rabbit,rat, processed_transcript processed_transcript A549@0.116372,AG04450@0.235006,BJ@0.0744175,GM12878@0.0924475,H1HESC@0.029062,HELAS3@0.057193,HEPG2@0.0456785,HMEC@0.013955,HSMM@0.011288,HUVEC@0.018583,K562@0.01892,MCF7@0.137682,NHEK@0.0515893,NHLF@0.053259,SKNSHRA@0.318604, 0 0 0 0 ENSG00000244848.1 ENST00000499512.1 chr13:41707075-41810822 4 1906 101835 intronic 1.86 0 1,1,1 1 0,0,0 0 11.5115137231797 320.1 14.5456453305352 17.6075808906565 373.472 15.7628541448059 24.8138852064614 317.867 0 0 chimp,dog,human,macaque,marmoset,orangutan, lincRNA lincRNA A549@0.235158,AG04450@0.279679,BJ@0.268123,GM12878@0.471029,H1HESC@0.455321,HELAS3@0.233562,HEPG2@0.190389,HMEC@0.115764,HSMM@0.161883,HUVEC@0.163679,K562@0.25333,MCF7@0.180164,NHEK@0.251455,NHLF@0.121828,SKNSHRA@0.13409, 0 0 0 0 ENSG00000247502.1 ENST00000501265.1 chr13:42535305-42555700 4 2074 18315 intergenic 6.03 0 0,1,1 0 0,0,0 42.0130183220829 2.28654108654109 47.329 8.46624879459981 3.2990444990445 54.172 8.87367405978785 4.3962871962872 54.734 0 0 chimp,human,macaque,marmoset,panda, lincRNA lincRNA A549@0.031656,AG04450@0.00954,BJ@0.0069875,GM12878@0.0543515,H1HESC@0.0896845,HELAS3@0.0209085,HEPG2@0.023367,HMEC@0.015764,HSMM@0.0105425,HUVEC@0,K562@0.0779045,MCF7@0.054992,NHEK@0.0437917,NHLF@0.0018675,SKNSHRA@0.066092, 0 0 0 0 ENSG00000231530.1 ENST00000413246.1 chr13:42617863-42618383 2 361 157 intronic -0.76 0 0,0,0 0 0,0,0 0 0 0 0 0 4.116 0 0 4.864 0 0 chimp,human,macaque,marmoset,orangutan, antisense antisense A549@0.0934925,AG04450@0.269721,BJ@0.118027,GM12878@0.014514,H1HESC@0.038697,HELAS3@0.181236,HEPG2@0,HMEC@0.0564,HSMM@0.0824555,HUVEC@0.084632,K562@0.0799535,MCF7@0.201262,NHEK@0.0359847,NHLF@0.0747155,SKNSHRA@0.485339, 0 0 0 0 ENSG00000226176.1 ENST00000432967.1 chr13:42848464-42851124 2 537 2121 intronic -5.30 0 0,0,0 0 0,0,0 17.6163873370577 0 0 0 0.991984912776992 2.76 0 2.17161716171617 3.124 0 0 cat,chimp,dog,guinea_pig,horse,human,macaque,marmoset,orangutan,panda,rabbit, sense_intronic sense_intronic A549@0.0800845,AG04450@0.076456,BJ@0.098752,GM12878@0.631601,H1HESC@0.087175,HELAS3@0.204957,HEPG2@0.113764,HMEC@0.008594,HSMM@0.0163665,HUVEC@0.0217815,K562@0.409946,MCF7@0.247994,NHEK@0.077256,NHLF@0,SKNSHRA@0.17012, 0 0 0 0 ENSG00000230901.1 ENST00000419514.1 chr13:43385973-43386428 2 190 263 intergenic -17.54 0 0,0,0 0 0,0,0 0 0 0 0 0 0 0 0 0 0 0 cat,chimp,cow,dog,elephant,guinea_pig,horse,human,macaque,marmoset,orangutan,panda,pig,rabbit, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000229546.1 ENST00000415620.1 chr13:43416550-43417023 2 225 246 intergenic 0.52 0 0,0,0 0 0,0,0 0 0 0 0 43.3373983739837 0 0 46.5406504065041 0 0 0 chimp,horse,human,macaque,marmoset,orangutan,panda,pig, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0.045693,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000229928.1 ENST00000425609.1 chr13:43732767-43733602 2 545 288 intergenic -6.99 0 0,0,0 0 0,0,0 57.3137614678899 0 0 99.2642201834862 0 2.232 97.3045871559633 0 2.259 0 0 cat,chimp,dog,guinea_pig,horse,human,macaque,marmoset,orangutan,panda,rabbit, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0.017091,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0.0203345, 0 0 0 0 ENSG00000238189.1 ENST00000434273.1 chr13:44032601-44033259 2 246 410 intronic -11.02 0 0,0,0 0 0,0,0 0 0 0 0 0 0 0 0 0 0 0 cat,chimp,cow,elephant,guinea_pig,horse,human,macaque,orangutan,panda,pig,rabbit, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000233821.1 ENST00000444442.1 chr13:44118054-44122192 2 3905 231 intronic -0.25 0 0,0,0 0 0,0,0 27.4798975672215 0 0 10.806914212548 0 0 15.5518565941101 0 0 0 0 chimp,dog,horse,human,macaque,orangutan,panda, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000233725.1 ENST00000439707.1 chr13:44596624-44604073 3 1882 5563 intergenic 0.87 0 0,0,0 0 0,0,0 0 0 0 1.52391073326249 1.869494876865 22.549 1.65143464399575 1.6627718856732 29.001 0 0 chimp,human,macaque,orangutan, lincRNA lincRNA A549@0.118121,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0.615455,NHEK@0,NHLF@0,SKNSHRA@0.213048, 0 0 0 0 ENSG00000233725.1 ENST00000423211.1 chr13:44599455-44604073 2 3206 1410 intergenic 0.86 0 0,0,0 0 0,0,0 0 0 0 0.894572676232065 6.07021276595745 1.841 0.96943231441048 3.6936170212766 2.827 0 0 chimp,human,macaque,marmoset,orangutan, lincRNA lincRNA A549@0.118121,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0.615455,NHEK@0,NHLF@0,SKNSHRA@0.213048, 0 0 0 0 ENSG00000226519.1 ENST00000432331.1 chr13:44680514-44711372 3 337 30517 intergenic -2.68 0 0,0,0 0 0,0,0 0 20.7435527738637 0 15.6083086053412 21.7337877248747 0 16.1424332344214 22.0358816397418 1.458 0 0 chimp,horse,human,macaque,marmoset,orangutan, lincRNA lincRNA A549@0.016248,AG04450@0,BJ@0,GM12878@0,H1HESC@0.0171195,HELAS3@0.019937,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0.006047,NHEK@0.00375467,NHLF@0.01135,SKNSHRA@0, 0 0 0 0 ENSG00000227258.1 ENST00000444663.1 chr13:44716682-44722166 4 495 4983 exonic 0 0 0,0,1 0 0,0,0 0 13.2281757977122 0 0 23.1585390327112 3.528 0 22.9544451133855 5.561 0 0 chimp,horse,human,macaque,marmoset,orangutan, antisense antisense A549@0.111511,AG04450@0.0503115,BJ@0.009699,GM12878@0,H1HESC@0.0108715,HELAS3@0.169253,HEPG2@0,HMEC@0.024617,HSMM@0,HUVEC@0,K562@0,MCF7@0.040747,NHEK@0.0826467,NHLF@0.039059,SKNSHRA@0.063671, 0 0 0 0 ENSG00000227258.1 ENST00000437867.1 chr13:44717729-44813010 3 263 95014 exonic 0.01 0 0,0,0 0 0,0,0 0 9.82141579135706 0 0 13.9482076325594 18.065 0 14.4464710463721 12.873 0 0 chimp,cow,horse,human,macaque,marmoset,orangutan, antisense antisense A549@0.111511,AG04450@0.0503115,BJ@0.009699,GM12878@0,H1HESC@0.0108715,HELAS3@0.169253,HEPG2@0,HMEC@0.024617,HSMM@0,HUVEC@0,K562@0,MCF7@0.040747,NHEK@0.0826467,NHLF@0.039059,SKNSHRA@0.063671, 0 0 0 0 ENSG00000235285.1 ENST00000415082.1 chr13:44720606-44732358 3 475 11273 intronic 8.54 0 0,0,0 0 0,0,0 0 5.67834649161714 28.244 0 16.1536414441586 25.293 0 16.9842987669653 23.016 0 0 chimp,dog,elephant,human,macaque,marmoset,orangutan, sense_intronic sense_intronic A549@0.0171015,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0.124345,HEPG2@0,HMEC@0.016907,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0.003514,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000230731.1 ENST00000421190.1 chr13:44806061-44810195 2 321 3811 intergenic 0 0 0,0,0 0 0,0,0 0 0 0 19.190031152648 22.429021254264 2.232 31.398753894081 24.7336657045395 2.331 0 0 cat,chimp,dog,horse,human,macaque,marmoset,orangutan,pig,rabbit, lincRNA lincRNA A549@0.061926,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0.02465,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0.0330695,K562@0,MCF7@0,NHEK@0.150658,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000237361.1 ENST00000432701.1 chr13:44974487-44980002 2 856 4657 intergenic 4.45 0 0,1,0 0 0,0,0 14.9065420560748 0 0 0 0.888984324672536 0 0 1.10972729224823 0 0 0 chimp,elephant,human,macaque,marmoset,orangutan, lincRNA processed_transcript A549@0.0072355,AG04450@0,BJ@0,GM12878@0.00619,H1HESC@0.256802,HELAS3@0.383418,HEPG2@1.05521,HMEC@0,HSMM@0,HUVEC@0.018674,K562@0.0031205,MCF7@0.002343,NHEK@0,NHLF@0,SKNSHRA@0.0079425, 0 0 0 0 ENSG00000237585.1 ENST00000426509.1 chr13:45225948-45275152 3 292 48908 intergenic 0 0 0,1,1 0 0,0,0 0 14.2680338594913 0 12.2260273972603 17.425656334342 0 12.0342465753425 17.9347754968512 1.215 0 0 chimp,horse,human,macaque,marmoset,orangutan,panda,rabbit, lincRNA lincRNA A549@0,AG04450@0.007598,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0.0118475,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000235097.1 ENST00000414562.1 chr13:45373639-45383766 3 2033 8090 intergenic 17.19 0 0,0,0 0 0,0,0 1.13084112149533 9.77775030902349 0 0 18.9504326328801 89.851 1.55386128873586 19.5919653893696 98.547 0 0 chimp,human,macaque,marmoset,orangutan, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0.001975,NHEK@0.00388767,NHLF@0.0019165,SKNSHRA@0.0022325, 0 0 0 0 ENSG00000223732.1 ENST00000437748.1 chr13:45620725-45657260 2 238 36295 intergenic 0.04 0 0,0,0 0 0,0,0 19.390756302521 3.92062267529963 0 21.2142857142857 7.1377324700372 0 20.844537815126 8.91549800247968 0 0 0 chimp,elephant,horse,human,macaque,marmoset,orangutan,pig, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000170919.9 ENST00000517509.1 chr13:45915480-45965618 11 1515 48603 exonic 3.66 1 0,1,1 1 0,1,0 0 0 219.34 42.1775577557756 6.89157047918853 221.069 190.009900990099 31.3961278110405 233.175 0 1 chimp,human, lincRNA processed_transcript A549@3.2728,AG04450@6.05831,BJ@4.94713,GM12878@4.53696,H1HESC@6.10989,HELAS3@2.94977,HEPG2@11.5287,HMEC@3.59413,HSMM@7.26328,HUVEC@9.12772,K562@2.30835,MCF7@1.69389,NHEK@6.71217,NHLF@5.49001,SKNSHRA@7.11404, 0 0 0 0 ENSG00000170919.9 ENST00000412946.2 chr13:45915554-45944051 5 739 27750 intergenic -2.05 0 0,1,0 1 0,1,0 0 0 219.34 0 1.58627027027027 221.069 0 24.2391711711712 233.175 1 1 chimp,human,macaque,marmoset,orangutan, lincRNA processed_transcript A549@3.2728,AG04450@6.05831,BJ@4.94713,GM12878@4.53696,H1HESC@6.10989,HELAS3@2.94977,HEPG2@11.5287,HMEC@3.59413,HSMM@7.26328,HUVEC@9.12772,K562@2.30835,MCF7@1.69389,NHEK@6.71217,NHLF@5.49001,SKNSHRA@7.11404, 0 0 0 0 ENSG00000170919.9 ENST00000520622.1 chr13:45915555-45951262 4 600 35101 intergenic -2.05 0 0,1,0 1 0,1,0 0 0 219.34 0 1.51149539899148 221.069 0 19.6975299849007 233.175 0 1 chimp,human,marmoset, lincRNA processed_transcript A549@3.2728,AG04450@6.05831,BJ@4.94713,GM12878@4.53696,H1HESC@6.10989,HELAS3@2.94977,HEPG2@11.5287,HMEC@3.59413,HSMM@7.26328,HUVEC@9.12772,K562@2.30835,MCF7@1.69389,NHEK@6.71217,NHLF@5.49001,SKNSHRA@7.11404, 0 0 0 0 ENSG00000170919.9 ENST00000520590.1 chr13:45915564-45952806 6 867 36365 intergenic 0.70 0 0,1,0 1 0,1,0 0 0 219.34 0 1.45895778908291 221.069 0 21.1497593840231 233.175 0 1 chimp,human,marmoset, lincRNA processed_transcript A549@3.2728,AG04450@6.05831,BJ@4.94713,GM12878@4.53696,H1HESC@6.10989,HELAS3@2.94977,HEPG2@11.5287,HMEC@3.59413,HSMM@7.26328,HUVEC@9.12772,K562@2.30835,MCF7@1.69389,NHEK@6.71217,NHLF@5.49001,SKNSHRA@7.11404, 0 0 0 0 ENSG00000170919.9 ENST00000523506.1 chr13:45915626-45952798 4 570 36596 intergenic 0.70 0 0,1,0 1 0,1,0 0 0 219.34 0 1.44974860640507 221.069 0 21.0162586074981 233.175 0 1 chimp,human, lincRNA processed_transcript A549@3.2728,AG04450@6.05831,BJ@4.94713,GM12878@4.53696,H1HESC@6.10989,HELAS3@2.94977,HEPG2@11.5287,HMEC@3.59413,HSMM@7.26328,HUVEC@9.12772,K562@2.30835,MCF7@1.69389,NHEK@6.71217,NHLF@5.49001,SKNSHRA@7.11404, 0 0 0 0 ENSG00000170919.9 ENST00000521336.1 chr13:45915646-45952806 5 754 36398 intergenic 0.70 0 0,1,0 1 0,1,0 0 0 219.34 0 1.45763503489203 221.069 0 21.1305840980274 233.175 0 1 chimp,human,orangutan, lincRNA processed_transcript A549@3.2728,AG04450@6.05831,BJ@4.94713,GM12878@4.53696,H1HESC@6.10989,HELAS3@2.94977,HEPG2@11.5287,HMEC@3.59413,HSMM@7.26328,HUVEC@9.12772,K562@2.30835,MCF7@1.69389,NHEK@6.71217,NHLF@5.49001,SKNSHRA@7.11404, 0 0 0 0 ENSG00000170919.9 ENST00000522859.1 chr13:45915648-45944642 3 766 28224 intergenic -0.39 0 0,1,1 1 0,1,0 0 0 219.34 0 1.55963010204082 221.069 0 23.8320932539683 233.175 0 0 chimp,horse,human,macaque,marmoset,orangutan, lincRNA retained_intron A549@3.2728,AG04450@6.05831,BJ@4.94713,GM12878@4.53696,H1HESC@6.10989,HELAS3@2.94977,HEPG2@11.5287,HMEC@3.59413,HSMM@7.26328,HUVEC@9.12772,K562@2.30835,MCF7@1.69389,NHEK@6.71217,NHLF@5.49001,SKNSHRA@7.11404, 0 0 0 0 ENSG00000170919.9 ENST00000405697.3 chr13:45915648-45965872 9 2275 47933 intergenic 1.17 0 1,1,1 1 0,1,0 0 0 219.34 28.0874725274725 6.98789977677174 221.069 111.259340659341 32.550914818601 233.175 0 1 chimp,human, lincRNA processed_transcript A549@3.2728,AG04450@6.05831,BJ@4.94713,GM12878@4.53696,H1HESC@6.10989,HELAS3@2.94977,HEPG2@11.5287,HMEC@3.59413,HSMM@7.26328,HUVEC@9.12772,K562@2.30835,MCF7@1.69389,NHEK@6.71217,NHLF@5.49001,SKNSHRA@7.11404, 0 0 0 0 ENSG00000170919.9 ENST00000524062.1 chr13:45915648-45965872 8 2277 47933 intergenic 3.66 0 1,1,1 1 0,1,0 0 0 219.34 28.0628019323672 6.98789977677174 221.069 111.513833992095 32.550914818601 233.175 0 1 chimp,human, lincRNA retained_intron A549@3.2728,AG04450@6.05831,BJ@4.94713,GM12878@4.53696,H1HESC@6.10989,HELAS3@2.94977,HEPG2@11.5287,HMEC@3.59413,HSMM@7.26328,HUVEC@9.12772,K562@2.30835,MCF7@1.69389,NHEK@6.71217,NHLF@5.49001,SKNSHRA@7.11404, 0 0 0 0 ENSG00000170919.9 ENST00000520310.1 chr13:45915673-45952755 4 559 36517 intergenic 0.70 0 0,1,0 1 0,1,0 0 0 211.075 0 1.45288495769094 214.853 0 21.0617246761782 227.107 0 1 chimp,human, lincRNA processed_transcript A549@3.2728,AG04450@6.05831,BJ@4.94713,GM12878@4.53696,H1HESC@6.10989,HELAS3@2.94977,HEPG2@11.5287,HMEC@3.59413,HSMM@7.26328,HUVEC@9.12772,K562@2.30835,MCF7@1.69389,NHEK@6.71217,NHLF@5.49001,SKNSHRA@7.11404, 0 0 0 0 ENSG00000170919.9 ENST00000520924.1 chr13:45915727-45944465 3 550 28184 intergenic -4.46 0 0,1,0 1 0,1,0 0 0 187.585 0 1.56184359920522 183.587 0 23.8659168322453 197.731 0 1 chimp,human,orangutan, lincRNA retained_intron A549@3.2728,AG04450@6.05831,BJ@4.94713,GM12878@4.53696,H1HESC@6.10989,HELAS3@2.94977,HEPG2@11.5287,HMEC@3.59413,HSMM@7.26328,HUVEC@9.12772,K562@2.30835,MCF7@1.69389,NHEK@6.71217,NHLF@5.49001,SKNSHRA@7.11404, 0 0 0 0 ENSG00000170919.9 ENST00000521507.1 chr13:45918439-45953409 5 660 34302 intergenic 0.70 0 0,0,0 0 0,1,0 0 0 0 0 1.54670281616232 0 0 15.1797271296134 64.764 0 1 chimp,human, lincRNA processed_transcript A549@3.2728,AG04450@6.05831,BJ@4.94713,GM12878@4.53696,H1HESC@6.10989,HELAS3@2.94977,HEPG2@11.5287,HMEC@3.59413,HSMM@7.26328,HUVEC@9.12772,K562@2.30835,MCF7@1.69389,NHEK@6.71217,NHLF@5.49001,SKNSHRA@7.11404, 0 0 0 0 ENSG00000170919.9 ENST00000523445.1 chr13:45918514-45955352 7 849 35977 intergenic 0.70 0 0,0,0 0 0,1,0 0 0 0 0 1.47469216443839 0 0 14.4729966367401 41.328 0 0 human, lincRNA processed_transcript A549@3.2728,AG04450@6.05831,BJ@4.94713,GM12878@4.53696,H1HESC@6.10989,HELAS3@2.94977,HEPG2@11.5287,HMEC@3.59413,HSMM@7.26328,HUVEC@9.12772,K562@2.30835,MCF7@1.69389,NHEK@6.71217,NHLF@5.49001,SKNSHRA@7.11404, 0 0 0 0 ENSG00000228886.1 ENST00000420693.1 chr13:45924458-45925485 2 308 717 intergenic 0 0 0,0,1 0 0,0,0 0 0 0 0 0 0 47.1428571428571 275.264993026499 164.99 0 0 chimp,human,orangutan, lincRNA lincRNA A549@0.014342,AG04450@0.0335885,BJ@0.029719,GM12878@0.0225125,H1HESC@0.0221395,HELAS3@0.0768295,HEPG2@0.0864125,HMEC@0,HSMM@0,HUVEC@0.004807,K562@0.097117,MCF7@0,NHEK@0.00580567,NHLF@0,SKNSHRA@0.081415, 0 0 0 0 ENSG00000170919.9 ENST00000522845.1 chr13:45940522-45952767 4 513 11726 intergenic 0.70 0 0,0,0 0 0,1,0 0 0 0 0 0.770595258400137 0 0 8.22735800784581 0 0 1 chimp,human, lincRNA processed_transcript A549@3.2728,AG04450@6.05831,BJ@4.94713,GM12878@4.53696,H1HESC@6.10989,HELAS3@2.94977,HEPG2@11.5287,HMEC@3.59413,HSMM@7.26328,HUVEC@9.12772,K562@2.30835,MCF7@1.69389,NHEK@6.71217,NHLF@5.49001,SKNSHRA@7.11404, 0 0 0 0 ENSG00000170919.9 ENST00000434849.1 chr13:45949069-45955297 2 2370 3856 intergenic 2.60 0 0,0,0 0 0,1,0 0 0 0 0 0 0 4.02447257383966 20.152489626556 0 0 1 chimp,human, lincRNA retained_intron A549@3.2728,AG04450@6.05831,BJ@4.94713,GM12878@4.53696,H1HESC@6.10989,HELAS3@2.94977,HEPG2@11.5287,HMEC@3.59413,HSMM@7.26328,HUVEC@9.12772,K562@2.30835,MCF7@1.69389,NHEK@6.71217,NHLF@5.49001,SKNSHRA@7.11404, 0 0 0 0 ENSG00000170919.9 ENST00000520585.1 chr13:45952665-45965014 7 810 11527 intergenic 1.50 0 0,0,1 0 0,1,0 0 0 0 64.3148148148148 15.6595818513056 0 116.958024691358 53.9865533096209 58.651 0 1 chimp,human, lincRNA processed_transcript A549@3.2728,AG04450@6.05831,BJ@4.94713,GM12878@4.53696,H1HESC@6.10989,HELAS3@2.94977,HEPG2@11.5287,HMEC@3.59413,HSMM@7.26328,HUVEC@9.12772,K562@2.30835,MCF7@1.69389,NHEK@6.71217,NHLF@5.49001,SKNSHRA@7.11404, 0 0 0 0 ENSG00000170919.9 ENST00000522673.1 chr13:45952695-45965857 8 1511 11637 intergenic 1.50 0 0,0,1 0 0,1,0 0 0 0 89.9576439444077 17.9957033599725 0 241.317008603574 58.3493168342356 58.651 0 1 chimp,human, lincRNA processed_transcript A549@3.2728,AG04450@6.05831,BJ@4.94713,GM12878@4.53696,H1HESC@6.10989,HELAS3@2.94977,HEPG2@11.5287,HMEC@3.59413,HSMM@7.26328,HUVEC@9.12772,K562@2.30835,MCF7@1.69389,NHEK@6.71217,NHLF@5.49001,SKNSHRA@7.11404, 0 0 0 0 ENSG00000170919.9 ENST00000519454.1 chr13:45953419-45965292 7 702 11159 intergenic 1.50 0 0,0,0 0 0,1,0 0 0 0 146.680911680912 20.5527377005108 0 278.505698005698 63.7389551035039 0 0 0 chimp,human,rat, lincRNA processed_transcript A549@3.2728,AG04450@6.05831,BJ@4.94713,GM12878@4.53696,H1HESC@6.10989,HELAS3@2.94977,HEPG2@11.5287,HMEC@3.59413,HSMM@7.26328,HUVEC@9.12772,K562@2.30835,MCF7@1.69389,NHEK@6.71217,NHLF@5.49001,SKNSHRA@7.11404, 0 0 0 0 ENSG00000170919.9 ENST00000520432.1 chr13:45956960-45965487 4 893 7628 intergenic 0.21 0 0,0,1 0 0,1,0 0 0 0 71.555431131019 36.9554273728369 0 248.417693169093 78.5621394861038 52.699 0 0 chimp,dog,human, lincRNA retained_intron A549@3.2728,AG04450@6.05831,BJ@4.94713,GM12878@4.53696,H1HESC@6.10989,HELAS3@2.94977,HEPG2@11.5287,HMEC@3.59413,HSMM@7.26328,HUVEC@9.12772,K562@2.30835,MCF7@1.69389,NHEK@6.71217,NHLF@5.49001,SKNSHRA@7.11404, 0 0 0 0 ENSG00000170919.9 ENST00000330825.3 chr13:45961720-45965610 3 2866 1020 intergenic 1.50 1 0,0,1 0 0,1,0 0 0 0 53.9424284717376 187.002941176471 0 142.585484996511 434.770588235294 0 0 1 chimp,human,orangutan, lincRNA retained_intron A549@3.2728,AG04450@6.05831,BJ@4.94713,GM12878@4.53696,H1HESC@6.10989,HELAS3@2.94977,HEPG2@11.5287,HMEC@3.59413,HSMM@7.26328,HUVEC@9.12772,K562@2.30835,MCF7@1.69389,NHEK@6.71217,NHLF@5.49001,SKNSHRA@7.11404, 0 0 0 0 ENSG00000170919.9 ENST00000379050.2 chr13:45964880-45965683 2 629 172 intergenic 3.08 1 0,0,0 0 0,1,0 0 0 0 182.969793322735 320.825581395349 155.946 464.406995230525 632.296511627907 404.564 0 0 chimp,horse,human,macaque,orangutan,rat, lincRNA processed_transcript A549@3.2728,AG04450@6.05831,BJ@4.94713,GM12878@4.53696,H1HESC@6.10989,HELAS3@2.94977,HEPG2@11.5287,HMEC@3.59413,HSMM@7.26328,HUVEC@9.12772,K562@2.30835,MCF7@1.69389,NHEK@6.71217,NHLF@5.49001,SKNSHRA@7.11404, 0 0 0 0 ENSG00000251015.1 ENST00000506633.1 chr13:45992297-45994506 2 699 1508 exonic 20.24 1 0,1,0 0 0,0,0 0 0 0 3.01001430615165 0 0 3.03290414878398 0 0 0 0 cat,chimp,human, lincRNA lincRNA A549@0,AG04450@0.006557,BJ@0.0173205,GM12878@0.021372,H1HESC@0.01059,HELAS3@0.0059545,HEPG2@0.0521845,HMEC@0,HSMM@0.0094385,HUVEC@0.233779,K562@0,MCF7@0.0615255,NHEK@0.00751667,NHLF@0.005567,SKNSHRA@0.045357, 0 0 0 0 ENSG00000235366.1 ENST00000435067.1 chr13:46255225-46256554 2 518 809 intergenic -6.54 0 0,0,1 0 0,0,0 0 0 7.92 0 0 8.624 0 0 12.127 0 0 chimp,horse,human,macaque,marmoset,orangutan,pig,rabbit, antisense antisense A549@0,AG04450@0,BJ@0,GM12878@5.00014,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000235903.1 ENST00000415033.1 chr13:46669028-46687467 3 641 17794 intronic 0.77 0 0,1,0 0 0,0,0 0 1.53984489153647 0 0 4.28206136900079 0 0 5.24092390693492 0 0 0 NA lincRNA processed_transcript A549@0.221788,AG04450@0.0585915,BJ@0.0150305,GM12878@0.192124,H1HESC@0.195319,HELAS3@0.249245,HEPG2@0.237881,HMEC@0.044507,HSMM@0.0365235,HUVEC@0.020569,K562@1.36103,MCF7@0.0126295,NHEK@0.899035,NHLF@0.245654,SKNSHRA@0.33305, 0 0 0 0 ENSG00000243079.1 ENST00000416521.1 chr13:47029338-47035157 3 458 5357 intergenic -2.26 0 0,0,0 0 0,0,0 0 0 0 50.6004366812227 5.66455105469479 0 88.1004366812227 39.6764980399477 0 0 0 chimp,cow,human,rat, processed_transcript processed_transcript A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000231817.1 ENST00000458282.1 chr13:47029488-47032373 2 560 2323 intergenic -2.01 0 0,0,0 0 0,0,0 0 0 0 0 0 0 0 36.6409814894533 21.497 0 0 chimp,dog,human,marmoset,orangutan, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0.0291955,H1HESC@0,HELAS3@0.0222815,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0.0069435,SKNSHRA@0, 130 2 0 0 ENSG00000224517.1 ENST00000455126.1 chr13:47426278-47430434 2 292 3862 intronic 0 1 0,0,0 0 0,0,0 0 0 0 0 0 0 0 0 0 0 0 cat,chimp,elephant,horse,human,macaque,orangutan, antisense antisense A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000224517.1 ENST00000452352.1 chr13:47426287-47428382 2 382 1711 intronic 0 1 0,0,0 0 0,0,0 0 0 0 0 0 0 0 0 0 0 0 chimp,cow,horse,human,macaque,marmoset,orangutan,panda,rabbit, antisense antisense A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000224517.1 ENST00000430913.1 chr13:47426287-47430434 3 425 3718 intronic 1.37 1 0,0,0 0 0,0,0 0 0 0 0 0 0 0 0 0 0 0 chimp,cow,guinea_pig,human,macaque,marmoset,orangutan, antisense antisense A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000228573.1 ENST00000417987.1 chr13:48399465-48410091 3 408 10214 intergenic -4.58 0 0,1,1 0 0,0,0 0 1.73399255923243 0 0 1.57372234188369 0 0 2.08889759154102 0 0 0 chimp,human,macaque,orangutan, lincRNA lincRNA A549@0.012002,AG04450@0,BJ@0.011776,GM12878@0.090841,H1HESC@0,HELAS3@0.0211515,HEPG2@0,HMEC@0,HSMM@0.0100125,HUVEC@0.059526,K562@0,MCF7@0,NHEK@0.0441323,NHLF@0.0093895,SKNSHRA@0.519386, 0 0 0 0 ENSG00000234689.1 ENST00000435617.1 chr13:48479464-48481492 3 212 1812 intergenic 0 0 0,0,0 0 0,0,0 0 0 0 0 0 0 0 1.80077262693157 0 0 0 chimp,cow,dog,human,macaque,marmoset,orangutan,panda, lincRNA lincRNA A549@0.190841,AG04450@0.010954,BJ@0,GM12878@0.009376,H1HESC@0,HELAS3@0.088528,HEPG2@0.068136,HMEC@0,HSMM@0,HUVEC@0.027684,K562@0.022847,MCF7@0.009351,NHEK@0.0184217,NHLF@0,SKNSHRA@0.0625515, 0 0 0 0 ENSG00000227848.1 ENST00000423869.1 chr13:48575525-48576688 2 550 611 intronic 9.32 0 0,1,1 0 0,0,0 0 0 0 0.478181818181818 0 39.953 0.494545454545455 0 45.434 0 0 chimp,human,macaque,orangutan, antisense antisense A549@0.0758195,AG04450@0.056953,BJ@0.055668,GM12878@0.131644,H1HESC@0.088152,HELAS3@0.153735,HEPG2@0.208795,HMEC@0.037089,HSMM@0.0082595,HUVEC@0,K562@0.0576145,MCF7@0.0437065,NHEK@0.0595433,NHLF@0.366223,SKNSHRA@0.0688415, 0 0 0 0 ENSG00000229111.1 ENST00000422483.1 chr13:48651273-48654127 3 539 2311 exonic -2.42 0 1,1,1 0 0,0,0 207.717996289425 14.2319342276071 0 333.567717996289 0 14.443 343.456400742115 0 17.22 0 0 chimp,cow,dog,elephant,guinea_pig,horse,human,macaque,marmoset,mouse,orangutan,rabbit, antisense antisense A549@0.0080095,AG04450@0.010924,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0.0064485,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000231473.2 ENST00000433480.2 chr13:48870649-48877797 3 1140 6004 intergenic 4.56 0 1,1,1 0 0,0,0 0 0 68.654 1.78947368421053 3.08161225849434 185.589 2.34473684210526 3.80696202531646 168.243 0 0 chimp,human,macaque,orangutan,rabbit, lincRNA processed_transcript A549@0.035078,AG04450@0.015704,BJ@0.0254505,GM12878@0.081699,H1HESC@0.087115,HELAS3@0.072652,HEPG2@0.202129,HMEC@0.021494,HSMM@0.0050735,HUVEC@0.0435545,K562@0.0598895,MCF7@0.0096975,NHEK@0.00796067,NHLF@0.0347245,SKNSHRA@0.145192, 0 0 0 0 ENSG00000231473.2 ENST00000436963.1 chr13:48876583-48877795 2 218 992 intergenic 0 0 1,1,1 0 0,0,0 0 0 68.654 7.01834862385321 0 186.099 0 6.36895161290323 168.243 0 0 chimp,human,macaque,marmoset,orangutan, lincRNA processed_transcript A549@0.035078,AG04450@0.015704,BJ@0.0254505,GM12878@0.081699,H1HESC@0.087115,HELAS3@0.072652,HEPG2@0.202129,HMEC@0.021494,HSMM@0.0050735,HUVEC@0.0435545,K562@0.0598895,MCF7@0.0096975,NHEK@0.00796067,NHLF@0.0347245,SKNSHRA@0.145192, 0 0 0 0 ENSG00000233456.1 ENST00000452288.1 chr13:49144775-49147453 2 411 2265 intergenic 0 0 0,0,1 0 0,0,0 0 0 0 0 12.0551876379691 0 0 16.153642384106 0 0 0 cat,chimp,human,macaque,marmoset,orangutan, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0.0306,H1HESC@0,HELAS3@0.050534,HEPG2@0.182321,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000233610.1 ENST00000425350.1 chr13:49151110-49152224 2 960 152 intergenic -4.28 0 0,1,0 0 0,0,0 0 0 0 3.05729166666667 0 0 2.07083333333333 0 0 0 0 chimp,human,macaque,marmoset,orangutan, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0.330602,H1HESC@0.0061785,HELAS3@0.173559,HEPG2@1.10428,HMEC@0.059589,HSMM@0,HUVEC@0,K562@0.0204245,MCF7@0,NHEK@0.0657203,NHLF@0,SKNSHRA@0.004725, 0 0 0 0 ENSG00000224798.1 ENST00000424106.1 chr13:50351804-50354767 2 2921 40 intronic 0.46 0 0,1,0 0 0,0,0 0 0 0 4.60527216706607 0 2.232 4.87333105100993 0 4.032 0 0 chimp,human,macaque,marmoset,orangutan, sense_intronic sense_intronic A549@0.107077,AG04450@0.17689,BJ@0.070137,GM12878@0.365144,H1HESC@0.158784,HELAS3@0.158993,HEPG2@0.0549855,HMEC@0.138983,HSMM@0.0427075,HUVEC@0.381253,K562@0.282876,MCF7@0.0658185,NHEK@0.126198,NHLF@0.0124815,SKNSHRA@0.30563, 0 0 0 0 ENSG00000231607.2 ENST00000425586.1 chr13:50601269-50699856 7 1260 97315 encompassing 1.88 0 0,1,1 0 0,0,0 202.311111111111 13.6752299234445 25.974 213.052380952381 16.4630838000308 83.009 221.340476190476 20.9401017314905 78.58 0 0 chimp,elephant,human,macaque,marmoset,orangutan,panda, lincRNA processed_transcript A549@2.17286,AG04450@0.908184,BJ@0.628929,GM12878@3.93385,H1HESC@0.597862,HELAS3@4.941,HEPG2@0.928096,HMEC@0.79257,HSMM@1.22967,HUVEC@1.12638,K562@6.21636,MCF7@2.86966,NHEK@0.554466,NHLF@0.943159,SKNSHRA@0.738494, 0 0 0 0 ENSG00000231607.2 ENST00000416253.1 chr13:50613528-50656114 7 1109 41465 intergenic -5.06 0 1,1,1 1 0,0,0 127.422001803427 13.6928493910527 42.114 104.011722272317 18.4603641625467 74.614 100.16862037872 20.4098396237791 83.039 0 0 chimp,cow,dog,elephant,guinea_pig,horse,human,macaque,marmoset,mouse,opossum,orangutan,panda,pig,rabbit,rat, lincRNA processed_transcript A549@2.17286,AG04450@0.908184,BJ@0.628929,GM12878@3.93385,H1HESC@0.597862,HELAS3@4.941,HEPG2@0.928096,HMEC@0.79257,HSMM@1.22967,HUVEC@1.12638,K562@6.21636,MCF7@2.86966,NHEK@0.554466,NHLF@0.943159,SKNSHRA@0.738494, 0 0 0 0 ENSG00000231607.2 ENST00000438752.1 chr13:50617572-50656114 7 2083 36447 intergenic -2.62 0 0,1,0 1 0,0,0 72.0648103696591 15.336625785387 42.114 63.7157945271243 20.2023211786978 74.614 62.8905424867979 22.2750569319834 83.039 0 0 cat,chimp,cow,dog,elephant,guinea_pig,horse,human,macaque,marmoset,mouse,opossum,orangutan,panda,pig,rabbit,rat, lincRNA processed_transcript A549@2.17286,AG04450@0.908184,BJ@0.628929,GM12878@3.93385,H1HESC@0.597862,HELAS3@4.941,HEPG2@0.928096,HMEC@0.79257,HSMM@1.22967,HUVEC@1.12638,K562@6.21636,MCF7@2.86966,NHEK@0.554466,NHLF@0.943159,SKNSHRA@0.738494, 0 0 0 0 ENSG00000231607.2 ENST00000235290.3 chr13:50618050-50656127 5 1289 36780 intergenic -4.80 0 1,1,1 1 0,0,0 117.616757176106 15.0703099510604 36.212 100.197827773468 20.0676454594889 66.385 94.4871993793638 22.2173463839043 74.615 0 0 cat,chimp,cow,dog,elephant,guinea_pig,horse,human,macaque,marmoset,mouse,opossum,orangutan,panda,pig,rabbit,rat, lincRNA processed_transcript A549@2.17286,AG04450@0.908184,BJ@0.628929,GM12878@3.93385,H1HESC@0.597862,HELAS3@4.941,HEPG2@0.928096,HMEC@0.79257,HSMM@1.22967,HUVEC@1.12638,K562@6.21636,MCF7@2.86966,NHEK@0.554466,NHLF@0.943159,SKNSHRA@0.738494, 0 0 0 0 ENSG00000231607.2 ENST00000458725.1 chr13:50618051-50656114 5 1246 36809 intergenic -4.80 0 1,1,1 1 0,0,0 113.411717495987 15.1857969518324 42.114 95.9157303370786 20.0979651715613 74.614 89.9799357945426 22.2407563367655 83.039 0 0 cat,chimp,cow,dog,elephant,guinea_pig,horse,human,macaque,marmoset,mouse,opossum,orangutan,panda,pig,rabbit,rat, lincRNA processed_transcript A549@2.17286,AG04450@0.908184,BJ@0.628929,GM12878@3.93385,H1HESC@0.597862,HELAS3@4.941,HEPG2@0.928096,HMEC@0.79257,HSMM@1.22967,HUVEC@1.12638,K562@6.21636,MCF7@2.86966,NHEK@0.554466,NHLF@0.943159,SKNSHRA@0.738494, 0 0 0 0 ENSG00000231607.2 ENST00000433070.1 chr13:50618523-50656128 4 695 36904 intergenic -4.80 0 1,1,1 1 0,0,0 159.564028776978 16.164535009755 35.758 107.78417266187 21.3157110340342 65.752 97.3107913669065 23.4519835248212 73.967 0 0 cat,chimp,cow,dog,elephant,guinea_pig,horse,human,macaque,marmoset,mouse,opossum,orangutan,panda,pig,rabbit,rat, lincRNA processed_transcript A549@2.17286,AG04450@0.908184,BJ@0.628929,GM12878@3.93385,H1HESC@0.597862,HELAS3@4.941,HEPG2@0.928096,HMEC@0.79257,HSMM@1.22967,HUVEC@1.12638,K562@6.21636,MCF7@2.86966,NHEK@0.554466,NHLF@0.943159,SKNSHRA@0.738494, 0 0 0 0 ENSG00000231607.2 ENST00000443587.1 chr13:50618651-50656108 6 699 36748 intergenic -4.80 0 0,1,0 1 0,0,0 198.264663805436 15.2110046805268 44.838 154.619456366237 20.131326874932 78.412 143.630901287554 22.2776749755089 86.927 0 0 chimp,cow,dog,elephant,guinea_pig,horse,human,macaque,marmoset,mouse,opossum,orangutan,panda,pig,rabbit, lincRNA processed_transcript A549@2.17286,AG04450@0.908184,BJ@0.628929,GM12878@3.93385,H1HESC@0.597862,HELAS3@4.941,HEPG2@0.928096,HMEC@0.79257,HSMM@1.22967,HUVEC@1.12638,K562@6.21636,MCF7@2.86966,NHEK@0.554466,NHLF@0.943159,SKNSHRA@0.738494, 0 0 0 0 ENSG00000231607.2 ENST00000421758.1 chr13:50623325-50656109 3 689 32091 intergenic -10.21 0 1,1,1 1 0,0,0 127.10595065312 13.4284690411642 44.384 100.969521044993 19.1366738337852 77.779 85.6516690856314 21.1701411610732 86.279 0 0 chimp,cow,dog,elephant,guinea_pig,horse,human,macaque,marmoset,mouse,orangutan,panda,pig,rabbit,rat, lincRNA processed_transcript A549@2.17286,AG04450@0.908184,BJ@0.628929,GM12878@3.93385,H1HESC@0.597862,HELAS3@4.941,HEPG2@0.928096,HMEC@0.79257,HSMM@1.22967,HUVEC@1.12638,K562@6.21636,MCF7@2.86966,NHEK@0.554466,NHLF@0.943159,SKNSHRA@0.738494, 0 0 0 0 ENSG00000231607.2 ENST00000449579.1 chr13:50623326-50656114 4 787 31995 intergenic -5.67 0 1,1,1 1 0,0,0 160.773824650572 12.2805750898578 42.114 150.329097839898 17.7182372245663 74.614 136.866581956798 19.7584622597281 83.039 0 0 chimp,cow,dog,elephant,guinea_pig,horse,human,macaque,marmoset,mouse,opossum,orangutan,panda,pig,rabbit,rat, lincRNA processed_transcript A549@2.17286,AG04450@0.908184,BJ@0.628929,GM12878@3.93385,H1HESC@0.597862,HELAS3@4.941,HEPG2@0.928096,HMEC@0.79257,HSMM@1.22967,HUVEC@1.12638,K562@6.21636,MCF7@2.86966,NHEK@0.554466,NHLF@0.943159,SKNSHRA@0.738494, 0 0 0 0 ENSG00000231862.1 ENST00000435843.1 chr13:50638816-50640735 2 785 1132 intergenic -3.44 0 0,0,0 0 0,0,0 0 0 0 45.1082802547771 1.31448763250883 0 47.5821656050955 1.6386925795053 1.458 0 0 chimp,guinea_pig,human,macaque,marmoset,orangutan, lincRNA lincRNA A549@0,AG04450@0,BJ@0.0062565,GM12878@0.0029785,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000229323.1 ENST00000428276.1 chr13:51095069-51101585 3 728 5784 intergenic -1.57 0 0,1,1 0 0,0,0 0 11.1137621023513 0 0 27.0314661134163 0 3.83104395604396 41.1345089903181 0 0 0 chimp,cow,elephant,horse,human,macaque,marmoset,orangutan,panda,rabbit, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0.026603,SKNSHRA@0.0062185, 0 0 0 0 ENSG00000237152.1 ENST00000413510.1 chr13:51381992-51423145 4 906 40241 intronic 1.84 0 0,0,0 0 0,0,0 0 21.9035809249273 0 2.90176600441501 22.9655575159663 0 3.04746136865342 25.7230188116598 0 0 0 chimp,cow,dog,horse,human,macaque,marmoset,orangutan, antisense antisense A549@0.025388,AG04450@0,BJ@0.031454,GM12878@0,H1HESC@0.0120765,HELAS3@0.064217,HEPG2@0.146989,HMEC@0,HSMM@0,HUVEC@0.002672,K562@0.050394,MCF7@0.0741595,NHEK@0.0141187,NHLF@0,SKNSHRA@0.008867, 0 0 0 0 ENSG00000233672.1 ENST00000454605.1 chr13:51456514-51484848 3 622 27708 intronic 1.43 0 0,0,0 0 0,0,0 0 14.0156994369857 0 0 13.8209181463837 0 0 21.9077161830518 0 0 0 chimp,guinea_pig,horse,human,macaque,marmoset,orangutan,panda, antisense antisense A549@0.0049665,AG04450@0.007536,BJ@0.0829545,GM12878@0.0488035,H1HESC@0.061212,HELAS3@0.106704,HEPG2@0.045261,HMEC@0.058963,HSMM@0.030695,HUVEC@0.062909,K562@0.047931,MCF7@0.070679,NHEK@0.0188143,NHLF@0.0247325,SKNSHRA@0.0799605, 0 0 0 0 ENSG00000230349.1 ENST00000413926.1 chr13:51657937-51659535 2 604 992 intergenic -2.27 0 0,0,0 0 0,0,0 70.5794701986755 0 0 142.289735099338 7.46673387096774 0 135.774834437086 5.46270161290323 0 0 0 chimp,cow,dog,elephant,guinea_pig,horse,human,macaque,marmoset,mouse,orangutan,panda, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000226792.1 ENST00000433280.1 chr13:51659560-51685078 3 428 25086 intergenic 1.21 0 0,1,1 0 0,0,0 76.0981308411215 2.24220680857849 35.437 161.210280373832 3.19979271306705 92.366 213.822429906542 3.82862951447022 133.782 0 0 chimp,cow,guinea_pig,horse,human,macaque,marmoset,mouse,orangutan,panda,rat, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@5.07056,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000236778.1 ENST00000434512.1 chr13:52028283-52124128 2 464 95379 exonic 0 0 0,0,0 0 0,0,0 0 8.10116482663899 28.657 0 10.3362375365647 91.342 0 16.9792511978528 92.064 0 0 chimp,elephant,horse,human,macaque,marmoset,orangutan,panda, lincRNA processed_transcript A549@0.0267315,AG04450@0.0142035,BJ@0.0084325,GM12878@0.023763,H1HESC@0,HELAS3@0,HEPG2@0.015102,HMEC@0,HSMM@0,HUVEC@0,K562@0.0259225,MCF7@0,NHEK@0.0140197,NHLF@0,SKNSHRA@0.024596, 0 0 0 0 ENSG00000226830.1 ENST00000413571.1 chr13:52195049-52197358 2 409 1898 intronic -6.19 0 0,0,0 0 0,0,0 0 0 0 0 0 3.107 0 0 3.159 0 0 cat,chimp,cow,horse,human,macaque,marmoset,orangutan,panda,pig, antisense antisense A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000231856.1 ENST00000456688.1 chr13:52378433-52387356 2 567 8354 intergenic -3.58 0 0,1,0 0 0,0,0 0 16.8096720134068 0 0 15.8404357194158 8.735 0 14.7777112760354 27.878 0 0 chimp,elephant,human,macaque,marmoset,orangutan,pig, antisense antisense A549@0.488842,AG04450@0.176268,BJ@0.67238,GM12878@0.49837,H1HESC@0.84577,HELAS3@1.05321,HEPG2@0.658923,HMEC@0.208689,HSMM@0.86394,HUVEC@0.62007,K562@0.397348,MCF7@1.38579,NHEK@0.331967,NHLF@0.226836,SKNSHRA@1.37147, 0 0 0 0 ENSG00000246013.1 ENST00000499147.1 chr13:52387483-52419286 3 3980 27819 intergenic 35.34 0 0,1,0 0 0,0,0 23.7628140703518 2.29702721161796 0 7.40954773869347 3.65333045760092 2.805 21.9344221105528 4.89791149933499 3.54 0 1 chimp,human,macaque,orangutan, lincRNA lincRNA A549@0.002387,AG04450@0.002296,BJ@0,GM12878@0.013039,H1HESC@0.046061,HELAS3@0.084408,HEPG2@0.193513,HMEC@0.001028,HSMM@0.0005165,HUVEC@0.000747,K562@0.0286615,MCF7@0.0015485,NHEK@0.0103863,NHLF@0,SKNSHRA@0.036839, 0 0 0 0 ENSG00000246013.1 ENST00000501205.1 chr13:52387483-52419286 5 4121 27674 intergenic 39.35 0 0,1,0 0 0,0,0 22.9497694734288 2.30906265809063 0 10.4246542101432 3.17677242176772 2.805 28.8298956563941 3.73596155235962 3.54 0 1 chimp,human,macaque,orangutan, lincRNA lincRNA A549@0.002387,AG04450@0.002296,BJ@0,GM12878@0.013039,H1HESC@0.046061,HELAS3@0.084408,HEPG2@0.193513,HMEC@0.001028,HSMM@0.0005165,HUVEC@0.000747,K562@0.0286615,MCF7@0.0015485,NHEK@0.0103863,NHLF@0,SKNSHRA@0.036839, 0 0 0 0 ENSG00000245521.1 ENST00000499822.1 chr13:52703027-52706855 2 3427 399 exonic 7.96 1 0,1,0 0 0,0,0 0 0 0 0.744091041727458 0 6.54 0.755763058068281 0 6.58 0 1 chimp,human,orangutan, lincRNA lincRNA A549@0.003222,AG04450@0,BJ@0,GM12878@0,H1HESC@0.0190955,HELAS3@0.0155045,HEPG2@0.0130405,HMEC@0,HSMM@0,HUVEC@0,K562@0.019429,MCF7@0.018313,NHEK@0.00690167,NHLF@0,SKNSHRA@0.0028945, 0 0 0 0 ENSG00000217576.4 ENST00000416599.1 chr13:52741844-52768600 9 3485 23255 intergenic 5.17 1 1,1,1 1 0,0,0 0 0 0 64.6565279770445 3.38761556654483 0 95.8757532281205 14.2497527413459 0 0 0 chimp,human,macaque,marmoset,orangutan, processed_transcript processed_transcript A549@0.917832,AG04450@0.756632,BJ@0.651913,GM12878@1.3167,H1HESC@1.16539,HELAS3@1.2024,HEPG2@2.31374,HMEC@0.74807,HSMM@1.10362,HUVEC@0.801474,K562@2.15653,MCF7@1.16903,NHEK@0.889296,NHLF@0.577766,SKNSHRA@1.6345, 0 0 0 0 ENSG00000217576.4 ENST00000451298.1 chr13:52741844-52865692 22 3774 120032 intergenic 5.17 1 0,1,1 0 0,0,0 0 0 0 93.3648648648649 1.76280491868835 2.976 148.94462109168 4.82578812316716 3.18 0 0 chimp,human,macaque,marmoset,orangutan, processed_transcript processed_transcript A549@0.917832,AG04450@0.756632,BJ@0.651913,GM12878@1.3167,H1HESC@1.16539,HELAS3@1.2024,HEPG2@2.31374,HMEC@0.74807,HSMM@1.10362,HUVEC@0.801474,K562@2.15653,MCF7@1.16903,NHEK@0.889296,NHLF@0.577766,SKNSHRA@1.6345, 0 0 0 0 ENSG00000217576.4 ENST00000422308.1 chr13:52793479-52908412 26 2654 112229 intergenic 6.27 1 0,1,0 0 0,0,0 0 0 0 51.595704596835 0.745413395824609 0 103.031650339111 2.35971094815066 0 0 0 chimp,human,macaque,marmoset,orangutan, processed_transcript processed_transcript A549@0.917832,AG04450@0.756632,BJ@0.651913,GM12878@1.3167,H1HESC@1.16539,HELAS3@1.2024,HEPG2@2.31374,HMEC@0.74807,HSMM@1.10362,HUVEC@0.801474,K562@2.15653,MCF7@1.16903,NHEK@0.889296,NHLF@0.577766,SKNSHRA@1.6345, 0 0 0 0 ENSG00000217576.4 ENST00000424511.1 chr13:52898036-52908410 3 720 9650 intergenic 6.27 0 0,1,0 0 0,0,0 0 0 0 0 0 0 0 0 0 0 0 chimp,human,orangutan, processed_transcript processed_transcript A549@0.917832,AG04450@0.756632,BJ@0.651913,GM12878@1.3167,H1HESC@1.16539,HELAS3@1.2024,HEPG2@2.31374,HMEC@0.74807,HSMM@1.10362,HUVEC@0.801474,K562@2.15653,MCF7@1.16903,NHEK@0.889296,NHLF@0.577766,SKNSHRA@1.6345, 120 2 72 2 ENSG00000235660.1 ENST00000443679.1 chr13:53058296-53058815 2 283 234 intergenic -4.02 0 0,0,1 0 0,0,0 0 0 0 0 0 0 0 0 0 0 0 chimp,human,macaque,marmoset,orangutan, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0.065588,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0.058542, 0 0 0 0 ENSG00000244471.1 ENST00000418237.1 chr13:53063128-53073279 4 669 9476 intergenic 6.27 0 0,1,0 0 0,0,0 0 8.97688898269312 0 0 9.78989024905023 0 0 10.4673913043478 0 0 0 chimp,human,macaque,orangutan, processed_transcript processed_transcript A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0.136387,MCF7@0,NHEK@0.00578933,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000244471.1 ENST00000446689.1 chr13:53063128-53073440 3 718 9590 intergenic 6.27 0 0,1,0 0 0,0,0 0 8.87017726798749 0 0 9.67351407716371 0 0 10.3429614181439 0 0 0 chimp,human,orangutan, processed_transcript processed_transcript A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0.136387,MCF7@0,NHEK@0.00578933,NHLF@0,SKNSHRA@0, 120 2 72 2 ENSG00000237092.1 ENST00000417989.1 chr13:53720674-53725943 3 574 4691 intergenic 0.53 0 0,0,0 0 0,0,0 1.66550522648084 88.3630356000853 11.76 3.45644599303136 78.1869537412066 2.728 3.81010452961672 77.0266467704114 2.849 0 0 cat,chimp,cow,dog,guinea_pig,horse,human,macaque,marmoset,orangutan,pig,rabbit, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0.0034845,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000234787.1 ENST00000423442.1 chr13:54689924-54707001 5 1053 16016 intergenic 3.26 0 0,0,0 0 0,0,0 0 2.57342657342657 0 0 6.75643106893107 18.927 0 7.95560689310689 20.706 0 0 chimp,human,macaque,marmoset,orangutan, lincRNA processed_transcript A549@0,AG04450@0,BJ@0,GM12878@0.0172025,H1HESC@7.01384,HELAS3@0,HEPG2@0.0061935,HMEC@0,HSMM@0,HUVEC@0,K562@0.0023215,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000234787.1 ENST00000427299.1 chr13:54698459-54706748 4 1028 7255 intergenic 2.12 0 0,0,1 0 0,0,0 0 0 0 12.9007782101167 0 6.692 12.091439688716 0.323914541695382 7.512 0 0 chimp,human, lincRNA processed_transcript A549@0,AG04450@0,BJ@0,GM12878@0.0172025,H1HESC@7.01384,HELAS3@0,HEPG2@0.0061935,HMEC@0,HSMM@0,HUVEC@0,K562@0.0023215,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000234787.1 ENST00000451744.1 chr13:54700997-54707001 3 1017 4983 intergenic 3.19 0 0,0,0 0 0,0,0 0 0 0 0 0 18.927 2.31071779744346 0 20.706 0 0 chimp,human, lincRNA processed_transcript A549@0,AG04450@0,BJ@0,GM12878@0.0172025,H1HESC@7.01384,HELAS3@0,HEPG2@0.0061935,HMEC@0,HSMM@0,HUVEC@0,K562@0.0023215,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 107 2 0 0 ENSG00000232954.1 ENST00000454780.1 chr13:58785825-58807251 7 800 20614 intergenic -0.50 0 0,0,0 0 0,0,0 0 9.18691180750946 0 0 8.86678956049287 0 0 8.96211312700107 0 0 0 chimp,human,macaque,marmoset,orangutan,pig, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0.0054025,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000227528.1 ENST00000435636.1 chr13:60586885-60618491 4 463 31137 exonic -1.57 0 0,0,0 0 0,0,0 79.7753779697624 9.57272698076244 9.799 86.2937365010799 13.4675787648136 2.367 117.963282937365 13.8734624401837 2.72 0 0 cat,chimp,cow,dog,elephant,guinea_pig,horse,human,macaque,marmoset,mouse,opossum,orangutan,panda,pig,platypus,rabbit,rat, antisense antisense A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000227528.1 ENST00000422052.1 chr13:60587437-60618491 4 424 30624 exonic -1.57 0 0,0,0 0 0,0,0 87.1132075471698 9.73308516196447 0 94.2311320754717 13.1853121734587 15.553 128.813679245283 13.5830067920585 16.012 0 0 cat,chimp,cow,dog,elephant,guinea_pig,horse,human,macaque,marmoset,mouse,opossum,orangutan,panda,pig,rabbit,rat, antisense antisense A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000227528.1 ENST00000432995.1 chr13:60587440-60618491 3 334 30713 exonic -1.57 0 0,0,0 0 0,0,0 110.586826347305 9.70488066942337 0 119.622754491018 13.1471038322534 15.553 163.523952095808 13.5436460130889 16.012 0 0 cat,chimp,cow,dog,elephant,guinea_pig,horse,human,macaque,marmoset,mouse,opossum,orangutan,panda,pig,platypus,rabbit,rat, antisense antisense A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000223815.1 ENST00000428656.1 chr13:60718832-60727639 3 364 8439 intronic -0.72 0 0,0,0 0 0,0,0 0 7.61879369593554 0 0 12.8043607062448 0 0 13.434293162697 3.346 0 0 chimp,dog,human,macaque,marmoset,orangutan,panda, antisense antisense A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000227336.1 ENST00000423739.1 chr13:60788486-60789080 2 417 175 intergenic 1.22 0 0,1,1 0 0,0,0 71.7026378896882 460 0 189.525179856115 685 0.478 191.805755395683 689 0.94 0 0 cat,chimp,cow,dog,elephant,guinea_pig,horse,human,macaque,marmoset,mouse,opossum,orangutan,panda,rabbit,rat, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0.0192445,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000225249.1 ENST00000413402.1 chr13:61259333-61268202 3 400 8465 intergenic 0 0 0,0,0 0 0,0,0 4.2125 26.911754282339 0 14.81 34.840283520378 39.958 12.54 37.2945067926757 40.247 0 0 chimp,dog,human,macaque,marmoset,orangutan,panda,rabbit, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000225249.1 ENST00000455894.1 chr13:61259333-61268662 3 321 9004 intergenic 0 0 0,0,0 0 0,0,0 5.24922118380062 25.3007552199023 0 18.4548286604361 32.754664593514 39.958 15.6261682242991 35.4057085739671 40.247 0 0 chimp,cow,dog,elephant,human,macaque,marmoset,orangutan,panda,pig,rabbit, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000227510.1 ENST00000414201.1 chr13:61491176-61492139 2 401 560 intergenic 0 0 0,0,0 0 0,0,0 0 0 0 0 0 0 0 0 0 0 0 chimp,human,macaque,marmoset,orangutan, lincRNA lincRNA A549@0.0167375,AG04450@0,BJ@0,GM12878@0.0415375,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000229578.1 ENST00000432697.1 chr13:62578226-62603681 2 706 24747 intergenic -2.64 0 0,0,0 0 0,0,0 12.0127478753541 4.0267103083202 27.242 3.97308781869688 7.87461106396735 25.682 4.03541076487252 11.0048894815533 25.923 0 0 human,macaque,orangutan, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000230142.1 ENST00000455977.1 chr13:62798230-62824080 3 315 25531 intergenic 0 0 0,0,1 0 0,0,0 0 0 0 0 7.43206298225686 0 51.9238095238095 9.47859464964161 0 0 0 chimp,dog,horse,human,macaque,marmoset,orangutan,panda, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000227611.1 ENST00000422527.1 chr13:62895438-62896531 2 553 538 intergenic -1.96 1 0,0,0 0 0,0,0 0 22.6579925650558 0 0 0 7.24 0 0 8.34 0 0 cat,chimp,dog,elephant,human,macaque,marmoset,orangutan,rabbit, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000229307.1 ENST00000431656.1 chr13:62897790-62902966 2 374 4800 intergenic 7.16 0 0,0,0 0 0,0,0 397.058823529412 0.9375 47 400.144385026738 0.375 159.915 389.318181818182 71.42625 179.097 0 0 cat,chimp,dog,elephant,guinea_pig,horse,human,macaque,marmoset,mouse,opossum,orangutan,panda,pig,platypus,rabbit,rat, processed_transcript processed_transcript A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000228669.1 ENST00000448411.1 chr13:63246418-63306313 4 429 59460 intergenic -1.45 1 0,1,0 0 0,0,0 0 6.41451395896401 0 0 13.8890010090817 0 0 15.0845778674739 0 0 0 chimp,human,macaque,marmoset,orangutan, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000228669.1 ENST00000438352.1 chr13:63305993-63306492 2 400 97 intergenic 6.00 0 0,0,1 0 0,0,0 0 0 0 0 0 0 0 0 0 0 0 cat,chimp,elephant,horse,human,macaque,marmoset,orangutan,panda, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000227564.1 ENST00000439454.1 chr13:63757234-63801189 3 345 43606 intergenic -5.14 0 0,0,0 0 0,0,0 0 3.25416227124708 0 0 6.14076044581021 0 0 9.46619731229647 0 0 0 chimp,cow,dog,guinea_pig,horse,human,macaque,marmoset,orangutan,panda,pig,rabbit, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000231061.1 ENST00000444536.1 chr13:64241814-64291151 4 402 48929 intergenic 7.29 0 0,0,0 0 0,0,0 0 5.97318563633019 0 0 8.96182223221402 0 0 10.52688589589 0 0 0 chimp,human,macaque,orangutan, antisense antisense A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000231061.1 ENST00000451570.1 chr13:64241815-64312151 4 411 69919 intergenic 1.73 1 0,0,0 0 0,0,0 135.474452554745 7.04824153663525 0 192.408759124088 11.1315808292453 0 189.48905109489 11.8791887755832 0 0 0 cat,chimp,dog,guinea_pig,horse,human,macaque,opossum,rat, antisense antisense A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000237378.1 ENST00000418943.1 chr13:64322132-64325213 2 774 2305 intergenic -3.14 1 0,0,0 0 0,0,0 0 0 0 0 0 19.074 0 0 160.158 0 0 chimp,human,marmoset,orangutan, lincRNA lincRNA A549@0,AG04450@0.0083105,BJ@0,GM12878@0.476116,H1HESC@0,HELAS3@0.0351325,HEPG2@0.24009,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 130 2 0 0 ENSG00000227674.1 ENST00000456627.1 chr13:64560504-64650144 6 1872 87758 intergenic 2.72 0 1,1,1 0 0,0,0 0 4.26820346862964 0 0 5.55878666332414 0 0 8.22098270243169 0 0 0 chimp,human,macaque,marmoset,orangutan, lincRNA processed_transcript A549@0.001156,AG04450@0,BJ@0.0034465,GM12878@13.7961,H1HESC@0.0030995,HELAS3@4.73623,HEPG2@5.47407,HMEC@0,HSMM@0,HUVEC@0.0695905,K562@3.88852,MCF7@0,NHEK@0.002812,NHLF@0.004156,SKNSHRA@0.005923, 0 0 0 0 ENSG00000234767.1 ENST00000437777.1 chr13:66440306-66452351 3 493 11548 intergenic 1.55 0 0,0,0 0 0,0,0 253.354969574036 30.5316072047108 0 458.478701825558 23.9363526151715 0 457.200811359026 25.1835815725667 0 0 0 chimp,cow,dog,elephant,guinea_pig,horse,human,macaque,marmoset,mouse,opossum,orangutan,panda,platypus,rabbit,rat, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000250631.2 ENST00000512415.2 chr13:66715500-66806206 3 841 89861 intergenic 5.45 0 0,0,0 0 0,0,0 0 15.7723595330566 0 0 16.5946406116113 0 0 17.3442427749524 36.9 0 0 NA lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0.0071655,H1HESC@0.243561,HELAS3@0.0049455,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000234527.1 ENST00000430861.1 chr13:66878003-66897693 2 530 19158 exonic -13.50 0 0,0,1 0 0,0,0 133.907547169811 46.9747364025472 544.214 117.820754716981 51.5499008247208 671.746 119.71320754717 53.0329888297317 575.868 0 0 cat,chimp,cow,dog,elephant,guinea_pig,horse,human,macaque,marmoset,mouse,opossum,orangutan,panda,pig,platypus,rabbit,rat, antisense antisense A549@0.00408,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000228842.1 ENST00000419371.1 chr13:67433130-67489163 5 456 55569 intronic 3.05 1 0,0,0 0 0,0,0 31.9166666666667 37.5908870053447 0 0 37.9802227860858 7.89 0 38.6879195234753 9.833 0 0 cat,chimp,cow,dog,elephant,guinea_pig,horse,human,macaque,marmoset,orangutan,panda,pig,rabbit, antisense antisense A549@0.0154085,AG04450@0,BJ@0,GM12878@0.004373,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000225263.1 ENST00000434073.1 chr13:67551564-67559908 3 476 7864 intronic -1.88 0 0,0,0 0 0,0,0 130.405462184874 26.0130976602238 142.329 88.7899159663865 38.6124109867752 44.197 183.128151260504 35.0625635808749 47.517 0 0 cat,chimp,cow,dog,elephant,guinea_pig,horse,human,macaque,marmoset,mouse,opossum,orangutan,panda,pig,rabbit, antisense antisense A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000233840.1 ENST00000456459.1 chr13:67565018-67576139 3 433 10684 intronic -12.15 1 0,0,0 0 0,0,0 0 32.2432609509547 0 0 34.3471546237364 1.434 0 36.2078809434669 8.095 0 0 chimp,cow,elephant,horse,human,macaque,marmoset,orangutan,pig, antisense antisense A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000230040.1 ENST00000415120.1 chr13:67946519-67954108 3 608 6977 intergenic 3.71 1 0,0,0 0 0,0,0 0 41.4802923892791 0 0 48.0983230614878 0 0 55.9266160240791 0 0 0 chimp,human,macaque,marmoset,orangutan, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0.013663,HEPG2@0,HMEC@0,HSMM@0.155439,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000237534.1 ENST00000433664.1 chr13:69796478-69866286 4 813 68989 intergenic -6.50 0 0,1,0 0 0,0,0 0 6.7144762208468 0 0 6.10568351476322 0 0 6.54678282044964 0 0 0 cat,chimp,human,macaque,marmoset,orangutan,panda, lincRNA lincRNA A549@0.0120555,AG04450@0.0078935,BJ@0,GM12878@0.078761,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0.141182,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000235221.1 ENST00000431686.1 chr13:69885465-69896233 2 819 9947 intergenic -7.54 0 0,0,0 0 0,0,0 0 31.1913139640093 0 0 36.6608022519353 0 0 34.1163164773298 0 0 0 chimp,guinea_pig,human,macaque,marmoset,orangutan,rabbit, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0.0139205,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0.00935,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000230223.1 ENST00000414504.1 chr13:70681345-70704974 4 949 22674 exonic 4.61 0 0,0,0 0 0,0,0 223.04425711275 12.3784510893534 11.48 221.918861959958 17.1458939754785 20.3 227.147523709168 16.9903413601482 20.164 0 0 chimp,elephant,human,macaque,marmoset,orangutan,rabbit, antisense antisense A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0.004262,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000230223.1 ENST00000424524.1 chr13:70682044-70705678 4 1232 22396 exonic 4.61 1 0,1,1 0 0,0,0 0 12.5321039471334 223.436 0 17.3587247722808 226.463 0 17.2012412930881 231.921 0 0 chimp,cow,dog,guinea_pig,horse,human,macaque,marmoset,orangutan,panda,rabbit, antisense antisense A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0.004262,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000226846.1 ENST00000428761.1 chr13:71589273-71742549 4 944 152326 intergenic -6.67 1 0,0,0 0 0,0,0 32.7457627118644 24.4148799285742 0 3.03813559322034 31.9419468770926 0 3.13983050847458 31.5063482268293 0 0 0 chimp,human,macaque,marmoset,orangutan, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0.00261,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000224853.1 ENST00000443621.1 chr13:73987610-74120978 2 280 133086 intergenic -0.40 0 0,0,0 0 0,0,0 0 26.0469846565379 0 0 36.0505537772568 27.594 0 37.0895360894459 47.636 0 0 cat,chimp,cow,dog,horse,human,macaque,marmoset,orangutan,panda, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0.00475367,NHLF@0,SKNSHRA@0.0110915, 0 0 0 0 ENSG00000224853.1 ENST00000452852.1 chr13:74120525-74222390 2 483 101380 intergenic -2.01 0 0,0,0 0 0,0,0 0 19.6040441901756 0 0 23.3134050108503 2.39 0 23.7347307161176 2.51 0 0 cat,chimp,cow,dog,elephant,guinea_pig,horse,human,macaque,marmoset,mouse,orangutan,panda,pig,rabbit, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0.00475367,NHLF@0,SKNSHRA@0.0110915, 0 0 0 0 ENSG00000228295.1 ENST00000430033.1 chr13:74138381-74162207 3 554 23268 intergenic -0.42 0 0,0,0 0 0,0,0 0 14.2724342444559 0 0 22.3119305483926 41.167 0 21.9623087502149 24.892 0 0 chimp,elephant,human,macaque,orangutan, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0.00916733,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000235532.1 ENST00000419499.1 chr13:74805594-74834113 2 3338 25179 intergenic 0.46 0 0,0,0 0 0,0,0 15.2813061713601 10.676436713134 0 10.7312762133014 13.2590253782914 0 12.0344517675255 13.8844672147424 0 0 0 chimp,human,macaque,orangutan, lincRNA processed_transcript A549@0,AG04450@0.0928765,BJ@0.045762,GM12878@0.0070045,H1HESC@0.165714,HELAS3@0,HEPG2@0.0026055,HMEC@0.007356,HSMM@0.713248,HUVEC@0.007113,K562@0.030634,MCF7@0.014603,NHEK@0.001581,NHLF@0.018032,SKNSHRA@0.0045795, 0 0 0 0 ENSG00000256370.1 ENST00000535519.1 chr13:74862164-74982939 2 2399 118374 intergenic 6.64 0 0,0,0 0 0,0,0 13.0312630262609 14.1610066399716 471.863 11.0300125052105 14.8369996789836 379.758 11.8282617757399 17.419112305067 380.373 0 0 chimp,dog,elephant,guinea_pig,horse,human,macaque,marmoset,mouse,opossum,orangutan,panda,pig,rabbit,rat, lincRNA lincRNA A549@0,AG04450@0.0122775,BJ@0,GM12878@0,H1HESC@0.026271,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0.298149,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0.0032505,SKNSHRA@0.020896, 0 0 0 0 ENSG00000226240.1 ENST00000423629.1 chr13:74993310-75009296 5 722 15256 intergenic 4.29 1 0,0,0 0 0,0,0 0 13.1136601992659 0 8.37950138504155 17.4573938122706 20.233 9.06094182825485 17.229614577871 21.424 0 0 human, antisense antisense A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0.0031355,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000236678.1 ENST00000451336.1 chr13:75126980-75130021 3 822 2215 intergenic 9.94 0 0,0,0 0 0,0,0 173.330900243309 177.905191873589 0 156.088807785888 187.766591422122 0 166.384428223844 180.025282167043 0 0 0 cat,chimp,dog,elephant,guinea_pig,horse,human,macaque,marmoset,mouse,orangutan,panda,rabbit,rat, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0.009508, 0 0 0 0 ENSG00000236678.1 ENST00000446691.1 chr13:75126987-75129973 3 811 2171 intergenic 9.94 0 0,0,0 0 0,0,0 210.729963008631 168.418240442193 0 197.263871763255 176.027176416398 0 208.831072749692 168.372178719484 0 0 0 cat,chimp,dog,elephant,guinea_pig,horse,human,macaque,marmoset,mouse,opossum,orangutan,panda,pig,rabbit,rat, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0.009508, 0 0 0 0 ENSG00000223880.1 ENST00000434832.1 chr13:75824616-75826148 2 385 1145 intergenic -0.60 0 0,1,0 0 0,0,0 0 0 8.28 0 67.9982532751092 0 342.597402597403 175.139737991266 0 0 0 chimp,human,macaque,marmoset,orangutan, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000225203.1 ENST00000440094.1 chr13:75949647-75950209 2 399 161 intronic -7.71 0 0,1,0 0 0,0,0 0 0 0 0 17.223602484472 2.976 0 17.4223602484472 3.18 0 0 chimp,guinea_pig,horse,human,macaque,orangutan,panda, antisense antisense A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0.0153105,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000228444.1 ENST00000422931.1 chr13:76203370-76206271 2 2042 857 intronic -0.78 0 0,0,1 0 0,0,0 0 0 13.384 1.62340842311459 0 2.104 1.68707149853085 0 2.176 0 0 chimp,human,macaque,orangutan, antisense antisense A549@0.0081265,AG04450@0.411188,BJ@0.64662,GM12878@0.0459415,H1HESC@0.167289,HELAS3@0.301441,HEPG2@0.118857,HMEC@0.026042,HSMM@0.365001,HUVEC@0.134572,K562@0.0693745,MCF7@0.0080025,NHEK@0.0194947,NHLF@0.254934,SKNSHRA@0.378347, 0 0 0 0 ENSG00000223458.1 ENST00000436872.1 chr13:76452849-76455263 3 240 2170 intronic 0 0 0,0,0 0 0,0,0 0 0 0 6.2 4.7331797235023 2.104 19.7875 5.01382488479263 2.176 0 0 chimp,cow,dog,elephant,horse,human,macaque,marmoset,orangutan,panda, sense_intronic sense_intronic A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000224933.1 ENST00000448806.1 chr13:76587159-76588637 2 275 1201 intergenic 0 0 0,0,1 0 0,0,0 0 0 0 0 0 8.148 0 0 14.187 0 0 chimp,dog,elephant,horse,human,macaque,marmoset,orangutan, lincRNA lincRNA A549@0,AG04450@0,BJ@0.0233655,GM12878@0.424928,H1HESC@0,HELAS3@0,HEPG2@0.0098475,HMEC@0,HSMM@0,HUVEC@0,K562@0.0196795,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000236051.1 ENST00000422231.1 chr13:77649649-77661911 4 513 11743 exonic 1.52 1 0,0,0 0 0,0,0 174.417153996101 37.2203866133015 0 204.11306042885 158.431576258196 0 240.052631578947 216.351187941753 0 0 0 cat,chimp,cow,dog,elephant,guinea_pig,horse,human,macaque,marmoset,mouse,opossum,orangutan,panda,pig,platypus,rabbit,rat, antisense antisense A549@0,AG04450@0.0067715,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0.0042085,HMEC@0.01237,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000236051.1 ENST00000450627.1 chr13:77649649-77661911 3 344 11914 exonic 1.10 1 0,0,0 0 0,0,0 149.476744186047 39.877706899446 0 208.43023255814 51.2992277992278 0 233.712209302326 57.066392479436 0 0 0 cat,chimp,cow,dog,elephant,guinea_pig,horse,human,macaque,marmoset,mouse,opossum,orangutan,panda,pig,platypus,rat, antisense antisense A549@0,AG04450@0.0067715,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0.0042085,HMEC@0.01237,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000236051.1 ENST00000448470.1 chr13:77649653-77661832 3 328 11847 exonic 1.52 1 0,0,0 0 0,0,0 191.780487804878 39.1672997383304 0 218.59756097561 51.5893475141386 0 245.112804878049 57.3891280492952 0 0 0 cat,chimp,cow,dog,elephant,guinea_pig,horse,human,macaque,marmoset,mouse,opossum,orangutan,panda,pig,platypus,rabbit,rat, antisense antisense A549@0,AG04450@0.0067715,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0.0042085,HMEC@0.01237,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000229521.1 ENST00000428716.1 chr13:77654646-77655325 2 424 253 intronic -4.36 0 0,0,0 0 0,0,0 0 0 0 0 0 0 0 0 0 0 0 chimp,cow,dog,guinea_pig,human,macaque,marmoset,orangutan,pig, antisense antisense A549@0,AG04450@0,BJ@0,GM12878@0.004732,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000224347.1 ENST00000457528.1 chr13:78173890-78180686 3 447 6345 intronic -3.35 0 0,0,0 0 0,0,0 10.324384787472 13.2115051221434 6.16 0 12.4466509062254 5.926 0 14.8518518518519 10.239 0 0 chimp,elephant,horse,human,marmoset,orangutan,panda, antisense antisense A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000224347.1 ENST00000456280.1 chr13:78173932-78180651 4 489 6224 exonic -0.32 0 0,0,0 0 0,0,0 5.12883435582822 13.0318123393316 6.16 8.90593047034765 11.9889138817481 5.926 13.6564417177914 14.0676413881748 10.239 0 0 chimp,cow,dog,elephant,guinea_pig,horse,human,macaque,marmoset,orangutan,panda,rabbit, antisense antisense A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000228011.1 ENST00000420956.1 chr13:78236635-78237275 2 516 122 intergenic -4.32 0 0,1,1 0 0,0,0 0 0 0 0 0 0 0 0 0 0 0 chimp,cow,horse,human,macaque,marmoset,orangutan, lincRNA lincRNA A549@0,AG04450@0.009093,BJ@0,GM12878@0,H1HESC@0,HELAS3@0.008058,HEPG2@0.011312,HMEC@0.015809,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0.00890167,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000225579.1 ENST00000422405.1 chr13:78402357-78408085 5 596 5124 intergenic 1.88 0 0,1,0 0 0,0,0 42.9261744966443 7.3620218579235 0 54.505033557047 34.0378610460578 0 60.5385906040269 33.5357142857143 7.781 0 0 chimp,guinea_pig,horse,human,macaque,marmoset,mouse,orangutan,rabbit,rat, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0.108645,H1HESC@0.18179,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0.0058155,K562@0,MCF7@0.003421,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000233379.1 ENST00000435281.1 chr13:78513297-78519009 2 900 4810 intergenic -0.48 0 0,0,0 0 0,0,0 0 0 0 0 1.24033264033264 0 0 1.25218295218295 0 0 0 chimp,human,macaque,orangutan, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0.0045995,HELAS3@0,HEPG2@0.004824,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0.006788,NHEK@0.00292733,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000236133.1 ENST00000452933.1 chr13:78563507-78564781 2 544 728 intergenic -3.79 0 0,0,0 0 0,0,0 0 0 20.72 10.3823529411765 0 46.23 23.4264705882353 5.1717032967033 52.609 0 0 cat,chimp,dog,guinea_pig,horse,human,macaque,marmoset,orangutan,panda,rabbit,rat, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0.0098525, 0 0 0 0 ENSG00000229249.1 ENST00000414743.1 chr13:78604115-78611354 3 244 6991 intergenic -1.27 0 0,0,0 0 0,0,0 373.47131147541 48.6682877985982 0 328.766393442623 61.1823773422972 5.168 358.27868852459 60.2500357602632 4.8 0 0 chimp,cow,dog,elephant,guinea_pig,horse,human,macaque,marmoset,mouse,orangutan,panda,pig,rabbit,rat, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000229249.1 ENST00000438327.1 chr13:78605071-78611354 3 205 6074 intergenic 0 0 0,0,0 0 0,0,0 311.058536585366 43.9022061244649 101.28 145.365853658537 45.9173526506421 205.322 180.292682926829 43.4759631215015 213.271 0 0 cat,chimp,cow,elephant,guinea_pig,horse,human,macaque,marmoset,mouse,orangutan,panda,pig,rabbit, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000233364.1 ENST00000430549.1 chr13:78763743-78848472 2 172 84555 intergenic -1.67 0 0,0,0 0 0,0,0 159.06976744186 42.4277807344332 0 79.8139534883721 43.6484063627225 0 71.0232558139535 44.4808822659807 0 0 0 chimp,dog,human,marmoset,orangutan,rabbit, lincRNA processed_transcript A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000235625.1 ENST00000435156.1 chr13:78849855-78851649 2 340 1452 intergenic -2.37 0 0,0,1 0 0,0,0 0 0 0 0 1.70798898071625 0 0 1.78374655647383 0 0 0 chimp,horse,human,macaque,orangutan, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0.0155205,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000234377.1 ENST00000444769.1 chr13:79152611-79181231 3 454 28162 encompassing 2.93 0 0,1,0 0 0,0,0 131.676211453744 161.880583765358 0 137.006607929515 189.516263049499 0 120.795154185022 205.733790213763 0 0 0 chimp,cow,dog,guinea_pig,horse,human,macaque,marmoset,orangutan,panda,pig, lincRNA processed_transcript A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0.0045395,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0.005081,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000225427.1 ENST00000446391.1 chr13:79361454-79366442 3 373 4611 intergenic 0 0 0,0,0 0 0,0,0 36.9973190348525 1.31446540880503 0 13.6675603217158 14.4970722186077 6.111 13.9892761394102 16.5274343960095 7.829 0 0 cat,chimp,cow,dog,elephant,horse,human,macaque,marmoset,orangutan,panda,pig,rabbit, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000227354.1 ENST00000456602.1 chr13:79980444-79997090 6 1750 14886 intergenic 0.46 1 1,1,1 1 0,0,0 5.78285714285714 1.68614805857853 137.715 1.44571428571429 1.68581217251108 256.557 3.15542857142857 1.96244793765955 262.805 0 0 chimp,human,macaque,marmoset,orangutan, lincRNA processed_transcript A549@0.314567,AG04450@0.367721,BJ@0.4562,GM12878@1.06528,H1HESC@1.01098,HELAS3@1.17053,HEPG2@0.464509,HMEC@0.198202,HSMM@0.382001,HUVEC@0.389134,K562@0.838645,MCF7@0.342278,NHEK@0.638059,NHLF@0.219496,SKNSHRA@0.636675, 0 0 0 0 ENSG00000232132.1 ENST00000457171.1 chr13:80051499-80055366 3 428 3435 exonic 0.61 0 0,1,0 0 0,0,0 0 0 58.119 9.68691588785047 5.58719068413392 51.099 7.81308411214953 6.65676855895197 47.333 0 0 cat,chimp,human,macaque,marmoset,orangutan,pig,rabbit, antisense antisense A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0.0107745,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000227676.1 ENST00000450187.1 chr13:80140881-80144983 2 346 3754 intergenic -7.87 0 0,0,0 0 0,0,0 0 0 79.093 0 6.14890783164624 45.621 0 6.38092701118807 85.981 0 0 cat,chimp,cow,dog,horse,human,macaque,orangutan,rabbit, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0.00758733,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000229011.1 ENST00000457858.1 chr13:80378553-80379820 2 426 839 intergenic -3.37 1 0,0,0 0 0,0,0 307.37323943662 0 13.57 280.361502347418 2.96066746126341 132.334 275.652582159624 8.34803337306317 137.534 0 0 cat,chimp,cow,dog,elephant,guinea_pig,horse,human,macaque,marmoset,mouse,orangutan,panda,pig,rabbit,rat, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0.0508915,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0.0048075,HUVEC@0,K562@0,MCF7@0,NHEK@0.132298,NHLF@0,SKNSHRA@0.023596, 0 0 0 0 ENSG00000229175.1 ENST00000427918.1 chr13:80446721-80492079 6 884 44464 intergenic -2.23 0 0,0,0 0 0,0,0 0 29.7783825116949 50.84 1.0814479638009 29.8878643396905 28.41 10.7081447963801 30.1846887369557 29.956 0 0 chimp,cow,elephant,horse,human,macaque,marmoset,orangutan,panda,rabbit,rat, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0.0219863,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000229246.1 ENST00000456588.1 chr13:81617805-81618577 2 655 115 intergenic -0.92 0 0,0,0 0 0,0,0 0 0 0 0 0 0 0 0 0 0 0 chimp,human,macaque,marmoset,orangutan, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@2.58075,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0.018548, 0 0 0 0 ENSG00000229309.1 ENST00000458480.1 chr13:81857308-81876542 4 286 18942 intergenic -3.85 0 0,0,0 0 0,0,0 0 5.5 0 42.7412587412587 4.97006651884701 17.138 66.5874125874126 8.46029986273889 31.313 0 0 chimp,human,macaque,marmoset,mouse,orangutan, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000233349.1 ENST00000446314.1 chr13:85136499-85137371 3 610 258 intergenic -4.19 0 0,0,0 0 0,0,0 0 0 0 0 0 0 0 0 0 0 0 NA lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000226370.1 ENST00000433074.1 chr13:85639222-85653055 5 596 13229 intergenic 0.50 0 0,0,1 0 0,0,0 0 8.1093053140827 0 25.744966442953 297.270617582584 0 25.4161073825503 295.439942550457 0 0 0 chimp,elephant,human,macaque,marmoset,orangutan,pig, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0.018498,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000226317.1 ENST00000424926.1 chr13:85937736-86118705 4 909 180054 intergenic -2.96 0 0,1,0 0 0,0,0 0 4.84709587123863 0 3.54675467546755 5.20549946127273 0 5.84268426842684 5.79852155464472 0 0 0 chimp,horse,human,macaque,marmoset,orangutan, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0.017676, 0 0 0 0 ENSG00000232252.1 ENST00000445967.1 chr13:86634948-86745025 3 191 109882 intergenic 0 0 0,0,0 0 0,0,0 0 2.15255455852642 0 24.6701570680628 4.90431553848674 0 26.3612565445026 7.56476947998762 0 0 0 chimp,cow,horse,human,macaque,orangutan,panda,pig, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0.0117155, 0 0 0 0 ENSG00000233528.1 ENST00000457672.1 chr13:87564173-87589062 2 294 24593 intergenic -3.27 0 0,0,0 0 0,0,0 0 0 0 0 0.819135526369292 0 0 0.879111942422641 0 0 0 chimp,human,macaque,marmoset,orangutan, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0.006946,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000232636.1 ENST00000450888.1 chr13:88079469-88080528 2 508 549 intergenic 0.41 0 0,0,0 0 0,0,0 0 0 54.236 0 0 98.175 0 0 97.9 0 0 chimp,horse,human,macaque,marmoset,orangutan, lincRNA lincRNA A549@0.005416,AG04450@0,BJ@0,GM12878@0.700658,H1HESC@0,HELAS3@0.303832,HEPG2@0.155107,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0.0159475,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000228824.1 ENST00000436290.1 chr13:88096247-88323218 6 1664 225297 intergenic -5.70 1 0,0,0 0 0,0,0 39.1989182692308 2.93917362414946 211.733 37.7824519230769 4.93911148395229 182.404 35.5420673076923 5.82844866997785 149.831 0 0 cat,chimp,cow,dog,elephant,guinea_pig,horse,human,macaque,marmoset,orangutan,pig,rabbit,rat, lincRNA processed_transcript A549@0.107662,AG04450@0,BJ@0,GM12878@0.555129,H1HESC@0,HELAS3@0.4842,HEPG2@0.151728,HMEC@0,HSMM@0,HUVEC@0,K562@0.004432,MCF7@0.028853,NHEK@0,NHLF@0.0161825,SKNSHRA@0.017368, 0 0 0 0 ENSG00000228824.1 ENST00000441617.1 chr13:88237113-88323514 3 837 85560 intergenic 1.15 0 0,0,0 0 0,0,0 58.8614097968937 3.02980364656382 308.801 64.2138590203106 3.82703366058906 260.328 47.7502986857826 4.92843618513324 224.731 0 0 cat,chimp,cow,dog,elephant,guinea_pig,horse,human,macaque,marmoset,orangutan,pig,rabbit, lincRNA processed_transcript A549@0.107662,AG04450@0,BJ@0,GM12878@0.555129,H1HESC@0,HELAS3@0.4842,HEPG2@0.151728,HMEC@0,HSMM@0,HUVEC@0,K562@0.004432,MCF7@0.028853,NHEK@0,NHLF@0.0161825,SKNSHRA@0.017368, 0 0 0 0 ENSG00000228824.1 ENST00000453832.1 chr13:88267818-88323361 3 612 54927 intergenic 8.08 0 0,0,0 0 0,0,0 69.9787581699346 4.71953683980556 276.369 60.0424836601307 5.85249512989968 240.402 37.968954248366 7.49500245780764 214.007 0 0 cat,chimp,cow,dog,elephant,guinea_pig,horse,human,macaque,marmoset,orangutan,pig,rabbit, lincRNA processed_transcript A549@0.107662,AG04450@0,BJ@0,GM12878@0.555129,H1HESC@0,HELAS3@0.4842,HEPG2@0.151728,HMEC@0,HSMM@0,HUVEC@0,K562@0.004432,MCF7@0.028853,NHEK@0,NHLF@0.0161825,SKNSHRA@0.017368, 0 0 0 0 ENSG00000223404.1 ENST00000422074.1 chr13:88453291-88456063 3 341 2427 intergenic 0 0 0,1,0 0 0,0,0 0 0 0 0 0 0 0 0 0 0 0 chimp,cow,dog,guinea_pig,horse,human,macaque,marmoset,orangutan,panda,pig,rabbit, lincRNA lincRNA A549@0.018047,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000231019.1 ENST00000430214.1 chr13:88795122-88888337 5 556 92651 intergenic -12.58 0 0,0,0 0 0,0,0 0 1.09914625854011 0 6.87769784172662 1.39110209279986 0 7.45323741007194 2.12231924102276 0 0 0 chimp,cow,dog,elephant,guinea_pig,horse,human,macaque,marmoset,orangutan,pig, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0.12101,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000229443.1 ENST00000424165.1 chr13:89193119-89194761 3 885 753 intergenic 5.09 1 0,0,0 0 0,0,0 0 0 0 0 0 0 0 0 0 0 0 chimp,human,macaque,orangutan, lincRNA lincRNA A549@0.011394,AG04450@0,BJ@0.015347,GM12878@0,H1HESC@0.01004,HELAS3@0.0141015,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0.0060145,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0.0244365, 0 0 0 0 ENSG00000229443.1 ENST00000448425.1 chr13:89194540-89197764 2 305 2917 intergenic 4.38 0 0,0,0 0 0,0,0 0 0 0 0 0 0 0 1.08296194720603 0 0 0 chimp,human,macaque, lincRNA lincRNA A549@0.011394,AG04450@0,BJ@0.015347,GM12878@0,H1HESC@0.01004,HELAS3@0.0141015,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0.0060145,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0.0244365, 0 0 0 0 ENSG00000232225.1 ENST00000415193.1 chr13:89867101-89889144 5 773 21262 intergenic 1.10 1 0,0,0 0 0,0,0 0 4.7145141567115 0 19.8369987063389 7.64255479258772 0 17.025873221216 7.98283322359138 0 0 0 chimp,cow,dog,elephant,guinea_pig,horse,human,macaque,marmoset,orangutan,panda,pig, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000232225.1 ENST00000445027.1 chr13:89867150-89872813 4 683 4974 intergenic -1.74 1 0,0,0 0 0,0,0 0 15.1236429433052 16.864 0 28.1013268998794 22.72 0 29.015681544029 25.407 0 0 chimp,human,macaque,marmoset,orangutan, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000234660.1 ENST00000446579.1 chr13:89925457-89932494 2 732 6303 intergenic -6.20 0 0,1,0 0 0,0,0 0 0 0 0 6.97017293352372 15.566 0 7.07313977471046 16.168 0 0 chimp,dog,elephant,guinea_pig,horse,human,macaque,marmoset,orangutan,pig, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0.011305,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000226037.1 ENST00000425048.1 chr13:90129862-90152763 2 664 22235 intergenic -5.24 1 0,0,0 0 0,0,0 0 3.19424331009669 0 0 6.61875421632561 0 0 7.18844164605352 0 0 0 cat,chimp,dog,human,macaque,marmoset,orangutan,panda, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0.314793,K562@0,MCF7@0,NHEK@0.00594267,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000236176.1 ENST00000435401.1 chr13:90200945-90206058 3 682 4427 intergenic -7.24 0 0,0,0 0 0,0,0 0 0 0 2.54545454545455 14.2254348317145 10.722 14.7096774193548 20.6464874632934 10.778 0 0 cat,chimp,cow,dog,elephant,guinea_pig,horse,human,macaque,marmoset,orangutan,panda,pig,rabbit, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0.005978,HSMM@0,HUVEC@0.034512,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000236176.1 ENST00000434117.1 chr13:90203487-90204643 2 328 826 intergenic 0 0 0,1,0 0 0,0,0 0 0 0 0 0 0 0 0 0 0 0 chimp,cow,dog,horse,human,macaque,marmoset,orangutan,pig, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0.005978,HSMM@0,HUVEC@0.034512,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000234384.1 ENST00000426840.1 chr13:91145541-91187334 6 736 41047 intergenic 1.71 0 0,0,0 0 0,0,0 71.0380434782609 9.21370623918922 0 81.8722826086957 10.5650595658635 0 64.1684782608696 11.5450824664409 0 0 0 cat,chimp,cow,dog,elephant,horse,human,macaque,marmoset,mouse,orangutan,panda,pig,rabbit,rat, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0.016638,HUVEC@0,K562@0.03293,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000231674.1 ENST00000419272.1 chr13:91543208-91578851 6 2012 33621 intergenic 1.54 0 0,0,0 0 0,0,0 0 10.4451979417626 15.128 20.8832007952286 11.6393623033223 32.533 16.1968190854871 13.411587995598 30.451 0 0 chimp,human,macaque,marmoset,orangutan, lincRNA lincRNA A549@0.057131,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0.001315,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0.0182545,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000234625.1 ENST00000442478.1 chr13:91739508-91741847 2 351 1986 intergenic 0 0 0,0,0 0 0,0,0 0 0 0 0 6.71248741188318 5.516 0 7.38721047331319 12.739 0 0 cat,chimp,dog,elephant,guinea_pig,human,macaque,marmoset,mouse,orangutan,panda, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0.0429145, 0 0 0 0 ENSG00000229557.1 ENST00000427717.1 chr13:91779867-91783661 2 429 3363 intergenic 0 1 0,0,0 0 0,0,0 0 0 0 5.94405594405594 0 0 6.34032634032634 0 0 0 0 chimp,cow,dog,elephant,horse,human,macaque,marmoset,orangutan,panda,pig,rat, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0.004677,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0.16346, 0 0 0 0 ENSG00000229557.1 ENST00000438789.1 chr13:91779906-91783619 3 461 3248 intergenic -5.62 1 0,0,0 0 0,0,0 0 0 0 3.87201735357918 0 0 4.13015184381779 0 0 0 0 chimp,human,macaque,marmoset,orangutan, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0.004677,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0.16346, 0 0 0 0 ENSG00000215417.4 ENST00000400282.2 chr13:92000074-92006833 4 927 5826 intergenic -0.25 1 0,1,1 0 0,0,0 57.740021574973 181.828527291452 284.32 89.4800431499461 177.872983178853 226.541 73.3516720604099 161.594747682801 200.408 0 0 cat,chimp,dog,elephant,guinea_pig,horse,human,macaque,marmoset,orangutan,panda,pig,rabbit, lincRNA non_coding A549@0.98304,AG04450@0.229784,BJ@0.0851365,GM12878@3.40661,H1HESC@2.12379,HELAS3@4.27699,HEPG2@0.637309,HMEC@0.306862,HSMM@0.0581775,HUVEC@0.349665,K562@30.4841,MCF7@0.641343,NHEK@0.345666,NHLF@0.0562375,SKNSHRA@0.538604, 0 0 0 0 ENSG00000232885.1 ENST00000417589.1 chr13:92992047-92992856 2 399 408 intronic -6.70 0 0,0,0 0 0,0,0 0 0 0 0 0 1.673 0 0 4.59 0 0 chimp,dog,human,macaque,marmoset,orangutan, antisense antisense A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000236240.1 ENST00000416664.1 chr13:93136859-93162347 2 656 24830 intronic -4.98 0 0,0,0 0 0,0,0 0 11.4348368908578 0 0 12.6395489327427 0 2.96341463414634 15.0578735400725 0 0 0 chimp,cow,elephant,guinea_pig,horse,human,macaque,marmoset,orangutan,pig,rabbit, sense_intronic sense_intronic A549@0,AG04450@0.018361,BJ@0,GM12878@0.008802,H1HESC@0,HELAS3@0.455397,HEPG2@0.146833,HMEC@0,HSMM@0,HUVEC@0.025557,K562@0.091296,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0.064281, 0 0 0 0 ENSG00000235984.1 ENST00000451897.1 chr13:93353642-93372228 4 376 18204 intronic -7.44 0 0,1,0 0 0,0,0 0 0.861184355086794 111.3 4.06914893617021 6.38568446495276 118.155 6.16755319148936 4.55498791474401 119.995 0 0 chimp,human,marmoset,orangutan, antisense antisense A549@0,AG04450@0,BJ@0,GM12878@0.0061685,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000235984.1 ENST00000419288.1 chr13:93353642-93373867 4 389 19830 intronic -7.44 0 0,0,0 0 0,0,0 0 6.40327786182552 27.472 0 11.8976298537569 68.553 0 10.349621785174 67.51 0 0 chimp,human,macaque,marmoset,orangutan, antisense antisense A549@0,AG04450@0,BJ@0,GM12878@0.0061685,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000232849.1 ENST00000443228.1 chr13:93708910-93710179 2 208 1059 intergenic -0.85 0 0,0,0 0 0,0,0 192.028846153846 0 0 27.0961538461538 18.2124645892351 0 49.9038461538462 20.4230406043437 0 0 0 cat,chimp,cow,dog,elephant,guinea_pig,horse,human,macaque,marmoset,mouse,orangutan,pig,rabbit, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000224394.1 ENST00000445540.1 chr13:94470677-94488397 3 584 17132 intronic 1.16 0 0,0,0 0 0,0,0 0 33.9067826289984 0 1.2277397260274 29.690345552183 35.012 3.95034246575342 31.5609385944432 33.971 0 0 chimp,cow,dog,horse,human,macaque,marmoset,orangutan,pig, antisense antisense A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000236520.1 ENST00000436329.1 chr13:94806447-94840245 4 646 33146 intronic -1.03 0 0,0,0 0 0,0,0 17.6594427244582 27.4028540397031 58.22 12.9736842105263 41.8128582634405 40.822 13.4674922600619 42.4164605080553 47.419 0 0 cat,chimp,cow,dog,elephant,guinea_pig,horse,human,macaque,marmoset,mouse,orangutan,panda,pig,rabbit,rat, antisense antisense A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0.0098335,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000238230.1 ENST00000433569.1 chr13:95351948-95355116 3 1841 1323 intergenic 11.04 0 0,0,0 0 0,0,0 0 0 0 1.57142857142857 0 0 1.62520369364476 0 0 0 0 chimp,cow,human,macaque,marmoset,orangutan, lincRNA lincRNA A549@0.0103915,AG04450@0,BJ@0,GM12878@0,H1HESC@0.273497,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0.0199765,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000248922.1 ENST00000513062.1 chr13:95357000-95360750 3 2386 1360 intergenic 3.92 0 0,1,1 1 0,0,0 20.8570829840738 505.801470588235 360.672 37.4585079631182 589.261029411765 436.044 43.6374685666387 607.419852941176 459.47 0 0 chimp,elephant,horse,human,macaque,marmoset,orangutan, lincRNA lincRNA A549@0.164938,AG04450@0,BJ@0.013832,GM12878@0,H1HESC@0.600885,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0.0145235,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000227640.1 ENST00000438290.1 chr13:95364970-95366749 2 1534 243 intergenic 12.02 0 0,0,1 1 0,0,0 47.5299869621903 394.37037037037 104.729 60.6134289439374 310.329218106996 310.016 49.5775749674055 303.127572016461 358.92 0 0 chimp,cow,elephant,guinea_pig,human,macaque,marmoset,mouse,orangutan,panda,rabbit,rat, lincRNA processed_transcript A549@0.47245,AG04450@0,BJ@0,GM12878@0,H1HESC@0.612393,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0.0311955,MCF7@0.266683,NHEK@0.0180327,NHLF@0,SKNSHRA@0.002954, 0 0 0 0 ENSG00000237796.1 ENST00000429011.1 chr13:95954705-95956401 2 1014 680 intergenic -4.82 0 0,0,0 0 0,0,0 0 0 0 0 0 7.077 0 0 7.294 0 0 chimp,human,macaque,marmoset,orangutan, antisense antisense A549@0,AG04450@0.009048,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0.00688,K562@0.0052705,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000223392.1 ENST00000416909.1 chr13:96131698-96186164 4 891 53569 intronic -5.44 0 0,1,1 0 0,0,0 0 3.59963785024921 0 0 5.54608075566092 0 0 6.60893427168698 0 0 0 chimp,dog,horse,human,macaque,orangutan,panda, lincRNA processed_transcript A549@0,AG04450@0,BJ@0,GM12878@0.092853,H1HESC@0.0046355,HELAS3@0,HEPG2@0.094986,HMEC@0,HSMM@0,HUVEC@0.023485,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0.00507, 0 0 0 0 ENSG00000247400.2 ENST00000499499.2 chr13:96325089-96329179 2 2906 1182 intergenic 3.43 0 1,1,1 1 0,0,0 0 0 60.954 10.7222986923606 3.84179357021997 87.578 14.6548520302822 4.16328257191201 94.794 1 1 chimp,human,macaque,marmoset,orangutan, lincRNA processed_transcript A549@0.323515,AG04450@0.247524,BJ@0.185136,GM12878@0.595359,H1HESC@0.383584,HELAS3@1.32432,HEPG2@0.843894,HMEC@0.083075,HSMM@0.116853,HUVEC@0.286219,K562@1.12831,MCF7@0.692172,NHEK@0.161363,NHLF@0.230837,SKNSHRA@0.543597, 0 0 0 0 ENSG00000237822.1 ENST00000449881.1 chr13:96567601-96568330 2 461 266 intronic -2.21 0 0,0,0 0 0,0,0 0 0 0 0 0 0 0 0 0 0 0 chimp,human,macaque,orangutan, sense_intronic sense_intronic A549@0.013689,AG04450@0.032038,BJ@0.0029905,GM12878@0.035673,H1HESC@0.010252,HELAS3@0.0673225,HEPG2@0.0036355,HMEC@0,HSMM@0.01175,HUVEC@0.012556,K562@0.0158125,MCF7@0.0123905,NHEK@0.0167033,NHLF@0,SKNSHRA@0.031151, 0 0 0 0 ENSG00000243300.1 ENST00000442322.1 chr13:97593535-97600517 2 787 6193 intergenic -3.86 0 0,1,0 0 0,0,0 0 1.20135637009527 0 0 9.22428548361053 0 144.683608640407 27.1655094461489 80.826 0 0 cat,chimp,human,macaque,orangutan, processed_transcript processed_transcript A549@0,AG04450@0,BJ@0,GM12878@0.002971,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000233124.1 ENST00000453862.1 chr13:97824723-97831876 2 690 6461 intergenic -2.76 0 0,0,0 0 0,0,0 1.12753623188406 3.2182324717536 0 15.2536231884058 1.51540009286488 0 13.2550724637681 1.58381055564154 0 0 0 chimp,guinea_pig,human,marmoset, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0.0059425,NHEK@0.00381567,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000226134.1 ENST00000437334.1 chr13:98327265-98330217 2 690 2260 intergenic -3.61 0 0,0,0 0 0,0,0 0 14.7796460176991 0 0 31.7902654867257 0 0 35.3761061946903 0 0 0 cat,chimp,cow,dog,elephant,guinea_pig,horse,human,macaque,marmoset,orangutan,panda, lincRNA lincRNA A549@0.017943,AG04450@0,BJ@0,GM12878@0,H1HESC@0.008589,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0.00281533,NHLF@0.0362485,SKNSHRA@0, 0 0 0 0 ENSG00000225318.1 ENST00000427404.1 chr13:98980972-98985492 2 556 3962 intronic -0.11 1 0,0,0 0 0,0,0 0 0 0 0 0.730186774356386 0 0 0.755174154467441 0 0 0 cat,chimp,cow,dog,elephant,horse,human,macaque,marmoset,orangutan,panda, sense_intronic sense_intronic A549@0.024273,AG04450@0.0289175,BJ@0.0560075,GM12878@0.01765,H1HESC@0.0963245,HELAS3@0.0454925,HEPG2@0.125393,HMEC@0,HSMM@0.008212,HUVEC@0.103178,K562@0,MCF7@0.004042,NHEK@0.0186967,NHLF@0,SKNSHRA@0.0372155, 0 0 0 0 ENSG00000225318.1 ENST00000457431.1 chr13:98981134-98985492 2 746 3610 intronic -0.11 1 0,1,0 0 0,0,0 0 0 0 0 0.801385041551247 0 0 0.828808864265928 0 0 0 cow,human,macaque,marmoset, sense_intronic sense_intronic A549@0.024273,AG04450@0.0289175,BJ@0.0560075,GM12878@0.01765,H1HESC@0.0963245,HELAS3@0.0454925,HEPG2@0.125393,HMEC@0,HSMM@0.008212,HUVEC@0.103178,K562@0,MCF7@0.004042,NHEK@0.0186967,NHLF@0,SKNSHRA@0.0372155, 0 0 0 0 ENSG00000231194.1 ENST00000432229.1 chr13:99087659-99088094 2 321 112 exonic -5.83 1 0,1,1 0 0,0,0 91.8722741433022 106.008928571429 0 119.919003115265 264.178571428571 2.151 132.943925233645 202.75 2.187 0 0 cat,chimp,cow,elephant,horse,human,macaque,marmoset,opossum,orangutan,panda,platypus,rat, antisense antisense A549@0,AG04450@0.023748,BJ@0.022867,GM12878@0.049928,H1HESC@0.0964,HELAS3@0,HEPG2@0.149537,HMEC@0.050707,HSMM@0.02823,HUVEC@0.0920185,K562@0,MCF7@0.012449,NHEK@0.145152,NHLF@0.006041,SKNSHRA@0.222085, 0 0 0 0 ENSG00000250780.1 ENST00000512054.1 chr13:99155296-99158256 2 1791 1167 intronic -1.34 0 0,0,1 0 0,0,0 23.0653266331658 93.5218508997429 0 0 51.0179948586118 0 0 66.3967437874893 0 0 0 chimp,cow,horse,human,macaque,marmoset,orangutan,panda, lincRNA lincRNA A549@0.05391,AG04450@0.079225,BJ@0.0419645,GM12878@0.176162,H1HESC@0.110824,HELAS3@0.0673905,HEPG2@0.097698,HMEC@0.003428,HSMM@0.0022495,HUVEC@0.218681,K562@0.121746,MCF7@0.0488065,NHEK@0.178707,NHLF@0.0086135,SKNSHRA@0.048669, 0 0 0 0 ENSG00000224418.1 ENST00000434547.1 chr13:99229498-99231084 2 1276 308 intergenic 0.46 1 1,1,1 0 0,0,0 11.9631661442006 0 83.425 303.931034482759 7.79220779220779 85.985 304.156739811912 7.79220779220779 101.42 0 0 chimp,cow,horse,human,macaque,orangutan, antisense antisense A549@0.623253,AG04450@0.26043,BJ@0.308121,GM12878@0.650492,H1HESC@0.375366,HELAS3@0.665741,HEPG2@0.669683,HMEC@0.28097,HSMM@0.241546,HUVEC@0.257757,K562@0.22849,MCF7@0.45745,NHEK@0.119383,NHLF@0.121641,SKNSHRA@0.653991, 0 0 0 0 ENSG00000229918.1 ENST00000439367.1 chr13:99484338-99486883 3 389 2152 intronic -1.87 1 0,1,1 0 0,0,0 13.0077120822622 0 118.033 8.78920308483291 0 128.779 14.1233933161954 0 166.228 0 0 chimp,horse,human,macaque,marmoset,orangutan,panda,rabbit, antisense antisense A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000228889.1 ENST00000426037.1 chr13:99848696-99852964 2 1704 2562 intergenic 4.40 1 1,1,1 1 0,0,0 2.08509389671362 0 52.162 0 1.21272443403591 58.286 0.285211267605634 1.31420765027322 58.27 0 0 chimp,human,macaque, lincRNA processed_transcript A549@0.926261,AG04450@0.272973,BJ@0.321432,GM12878@0.279456,H1HESC@0.868874,HELAS3@1.3243,HEPG2@0.542243,HMEC@0.375484,HSMM@0.31216,HUVEC@0.276598,K562@0.867656,MCF7@0.817675,NHEK@0.527755,NHLF@0.21769,SKNSHRA@0.947053, 0 0 0 0 ENSG00000228889.1 ENST00000445737.1 chr13:99848696-99852964 2 1432 2834 intergenic -7.59 1 1,1,1 1 0,0,0 2.48114525139665 0 52.162 0 1.09633027522936 58.286 0.339385474860335 1.18807339449541 58.27 0 0 chimp,human,macaque,marmoset, lincRNA processed_transcript A549@0.926261,AG04450@0.272973,BJ@0.321432,GM12878@0.279456,H1HESC@0.868874,HELAS3@1.3243,HEPG2@0.542243,HMEC@0.375484,HSMM@0.31216,HUVEC@0.276598,K562@0.867656,MCF7@0.817675,NHEK@0.527755,NHLF@0.21769,SKNSHRA@0.947053, 0 0 0 0 ENSG00000203341.3 ENST00000339009.5 chr13:99970408-99971209 2 442 357 intronic 0.86 0 0,0,1 0 0,0,0 0 0 39.576 0 0 64.047 6.81447963800905 0 66.351 0 0 chimp,human,macaque,orangutan, sense_intronic sense_intronic A549@0.007796,AG04450@0,BJ@0,GM12878@0.014714,H1HESC@0.009824,HELAS3@0.033023,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0.016182,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0.0139545, 2 44 0 0 ENSG00000233552.2 ENST00000441924.2 chr13:100139216-100149026 3 999 8807 intergenic 3.06 0 0,1,0 0 0,0,0 0 0 0 0 0 0 28 0 0 0 0 NA lincRNA lincRNA A549@0.284907,AG04450@0.0385815,BJ@0.0449935,GM12878@0.52468,H1HESC@0.148087,HELAS3@0.389642,HEPG2@0.856212,HMEC@0.011716,HSMM@0.209487,HUVEC@0.0452035,K562@0.119424,MCF7@0.629736,NHEK@0.053756,NHLF@0.0701155,SKNSHRA@0.381055, 0 0 0 0 ENSG00000225985.1 ENST00000435885.1 chr13:100143537-100144751 2 333 879 intergenic -9.04 0 0,0,0 0 0,0,0 0 0 0 0 0 0 0 0 0 0 0 NA antisense antisense A549@0,AG04450@0,BJ@0,GM12878@0.041311,H1HESC@0.006468,HELAS3@0.0346685,HEPG2@0.108639,HMEC@0,HSMM@0,HUVEC@0.0072885,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0.010684, 0 0 0 0 ENSG00000233552.2 ENST00000418417.2 chr13:100143729-100148992 4 2792 2465 intergenic 3.78 0 0,1,0 0 0,0,0 0 0 0 0 0 0 0 0 0 0 0 NA lincRNA lincRNA A549@0.284907,AG04450@0.0385815,BJ@0.0449935,GM12878@0.52468,H1HESC@0.148087,HELAS3@0.389642,HEPG2@0.856212,HMEC@0.011716,HSMM@0.209487,HUVEC@0.0452035,K562@0.119424,MCF7@0.629736,NHEK@0.053756,NHLF@0.0701155,SKNSHRA@0.381055, 0 0 0 0 ENSG00000203441.2 ENST00000366259.2 chr13:100151981-100153306 2 870 453 intergenic 3.62 0 0,1,0 0 0,0,0 0 0 154.816 0 0 147.949 0 0 123.184 0 0 cat,chimp,cow,dog,elephant,horse,human,macaque,marmoset,orangutan,panda, antisense antisense A549@0.122895,AG04450@0.0387495,BJ@0.0222015,GM12878@0.326012,H1HESC@0.191679,HELAS3@0.623398,HEPG2@0.200523,HMEC@0.183131,HSMM@0.0230185,HUVEC@0.0296835,K562@0.427035,MCF7@0.10312,NHEK@0.111656,NHLF@0.0510425,SKNSHRA@0.245655, 0 0 0 0 ENSG00000234168.1 ENST00000437113.1 chr13:100229366-100232622 3 649 2603 intergenic 2.18 0 0,0,0 0 0,0,0 0 0 0 2.6748844375963 2.18978102189781 0 2.79352850539291 2.33269304648483 0 0 0 chimp,human,macaque,marmoset,orangutan, lincRNA lincRNA A549@0.017612,AG04450@0.036324,BJ@0,GM12878@0.0044855,H1HESC@0,HELAS3@0.0040705,HEPG2@0.0083675,HMEC@0,HSMM@0,HUVEC@0,K562@0.0041065,MCF7@0.0371535,NHEK@0.030181,NHLF@0,SKNSHRA@0.07694, 0 0 0 0 ENSG00000227659.1 ENST00000430125.1 chr13:100342335-100343225 2 693 195 intronic -7.80 0 0,0,0 0 0,0,0 252.051948051948 139.641025641026 77.265 117.275613275613 0 19.22 151.369408369408 0 23.749 0 0 chimp,cow,dog,elephant,horse,human,macaque,marmoset,mouse,opossum,orangutan,panda,pig,rabbit, antisense antisense A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000234303.1 ENST00000416009.1 chr13:100378501-100379745 2 620 622 intronic -11.36 1 0,0,0 0 0,0,0 37.7209677419355 0 0 0 0 0 0 0 10.693 0 0 cat,cow,human,marmoset,pig, antisense antisense A549@0,AG04450@0,BJ@0,GM12878@0.009723,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000233731.1 ENST00000417102.1 chr13:100426279-100427543 2 372 890 intronic 0 0 0,0,0 0 0,0,0 154.693548387097 91.2247191011236 1.268 95.2338709677419 99.6325842696629 0 96.7043010752688 105.697752808989 2.187 0 0 cat,chimp,cow,dog,elephant,guinea_pig,horse,human,macaque,marmoset,orangutan,panda,rabbit, sense_intronic sense_intronic A549@0,AG04450@0,BJ@0,GM12878@0.025335,H1HESC@0.032614,HELAS3@0.002235,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0.0224815,MCF7@0,NHEK@0.00630667,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000255768.1 ENST00000538409.1 chr13:100504884-100609401 8 3325 101178 intronic 4.49 0 0,0,0 0 0,0,0 183.577744360902 51.7938089307952 102.714 141.648421052632 50.2985135108423 115.887 143.33984962406 54.8349245883493 88.712 0 0 chimp,dog,elephant,guinea_pig,horse,human,macaque,marmoset,orangutan,panda,pig, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0.090568,HELAS3@0.003757,HEPG2@0.0013055,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000234650.1 ENST00000451662.1 chr13:101116694-101132539 5 469 15368 intronic 3.42 0 0,0,0 0 0,0,0 0 13.9015486725664 0 0 17.108407079646 0 0 23.4693519000521 0 0 0 chimp,horse,human,macaque,marmoset,orangutan, antisense antisense A549@0,AG04450@0,BJ@0.0103405,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000234650.1 ENST00000455958.1 chr13:101131801-101133269 3 353 1111 intronic -1.49 0 0,1,0 0 0,0,0 0 0 0 0 0 0 0 0 0 0 0 chimp,human,macaque,marmoset,orangutan, antisense antisense A549@0,AG04450@0,BJ@0.0103405,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000234650.1 ENST00000414553.1 chr13:101131813-101133411 3 343 1251 intronic -0.17 0 0,1,0 0 0,0,0 0 0 0 0 0 0 0 0 0 0 0 chimp,human,macaque,marmoset,orangutan, antisense antisense A549@0,AG04450@0,BJ@0.0103405,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000224356.1 ENST00000454752.1 chr13:101189577-101232371 4 786 42002 intronic -1.64 0 0,0,0 0 0,0,0 0 2.42300366649207 0 0 4.50192847959621 0 0 14.3602685586401 0 0 0 chimp,horse,human,macaque,marmoset,orangutan, processed_transcript processed_transcript A549@0.389331,AG04450@0.131233,BJ@0.088206,GM12878@0.149926,H1HESC@0.179148,HELAS3@0.303145,HEPG2@0.195518,HMEC@0.046186,HSMM@0.203821,HUVEC@0.608953,K562@0.083732,MCF7@0.289407,NHEK@0.526421,NHLF@0,SKNSHRA@0.173399, 0 0 0 0 ENSG00000233009.1 ENST00000457843.1 chr13:101360579-101711638 8 2838 348207 exonic 4.40 1 0,1,0 0 0,0,0 27.0239605355884 10.6555439724072 0 34.6835799859056 12.5932218479238 9.147 49.61592670895 14.8146102749227 14.386 0 0 chimp,horse,human,macaque,orangutan, antisense antisense A549@0,AG04450@0,BJ@0.0025145,GM12878@0.027592,H1HESC@0.0165415,HELAS3@0.020533,HEPG2@0.047405,HMEC@0.004316,HSMM@0.004494,HUVEC@0.0020915,K562@0.0106065,MCF7@0.001445,NHEK@0.00538733,NHLF@0,SKNSHRA@0.004786, 0 0 0 0 ENSG00000229599.1 ENST00000436722.1 chr13:101593116-101596618 2 459 3041 intergenic -4.93 0 0,0,0 0 0,0,0 23.0501089324619 62.549161460046 53.554 77.5904139433551 59.1048997040447 54.54 108.217864923747 68.1706675435712 56.179 0 0 cat,chimp,dog,elephant,guinea_pig,horse,human,macaque,marmoset,orangutan,panda, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000243319.1 ENST00000437115.1 chr13:102945824-103019738 3 865 73045 intronic -6.82 0 0,1,0 0 0,0,0 126.034682080925 16.9729755630091 0 93.8959537572254 15.2949825450065 0 118.500578034682 18.4019850776918 0 0 0 chimp,elephant,guinea_pig,horse,human,macaque,marmoset,mouse,opossum,orangutan,panda,pig,rabbit,rat, processed_transcript processed_transcript A549@0,AG04450@0.0194325,BJ@0.002788,GM12878@0.0506865,H1HESC@0.0791615,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0.00628,MCF7@0,NHEK@0.001683,NHLF@0.0172765,SKNSHRA@1.68657, 0 0 0 0 ENSG00000234445.1 ENST00000444686.1 chr13:103019889-103020395 2 292 212 intronic 2.90 0 0,0,0 0 0,0,0 0 0 0 0 0 1.195 0 0 1.255 0 0 NA antisense antisense A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000234445.1 ENST00000451630.1 chr13:103019914-103026016 2 319 5781 intronic -0.05 0 0,0,0 0 0,0,0 109.191222570533 5.77893098079917 0 287.495297805643 6.53226085452344 1.195 268.297805642633 7.09807991696938 1.255 0 0 chimp,cow,dog,elephant,guinea_pig,horse,human,macaque,marmoset,opossum,orangutan,panda,pig,rabbit, antisense antisense A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000231633.1 ENST00000430111.1 chr13:103395340-103397574 2 1945 287 intergenic -5.98 0 0,0,0 0 0,0,0 0 0 0 0 0 2.151 0 0 0 0 0 cat,chimp,cow,dog,elephant,horse,human,macaque,marmoset,mouse,orangutan,panda,pig,rabbit,rat, antisense antisense A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0.440135,HSMM@0,HUVEC@0,K562@0.00376,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000165366.8 ENST00000416924.1 chr13:103532286-103533517 2 359 870 intergenic -1.23 0 0,0,0 0 0,0,0 0 0 0 70.2339832869081 16.7103448275862 5.244 74.1949860724234 15.4080459770115 12.105 0 0 cat,chimp,cow,dog,elephant,guinea_pig,horse,human,macaque,marmoset,mouse,orangutan,panda,rabbit,rat, lincRNA lincRNA A549@0.0970995,AG04450@0.368883,BJ@0.319584,GM12878@1.1151,H1HESC@0.057455,HELAS3@0.653075,HEPG2@0.901768,HMEC@0.011342,HSMM@0.670035,HUVEC@0.088766,K562@0.03735,MCF7@0,NHEK@1.00282,NHLF@0.75332,SKNSHRA@1.04321, 0 0 0 0 ENSG00000234551.1 ENST00000444795.1 chr13:104077550-104080035 2 490 1993 intergenic -6.03 1 0,0,0 0 0,0,0 0 45.8519819367787 0 0 53.9708981435023 0 0 56.1229302558956 0 0 0 cat,chimp,cow,dog,elephant,horse,human,macaque,marmoset,orangutan, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0.00778367,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000232307.1 ENST00000448407.1 chr13:106111404-106158030 7 2475 44139 exonic 3.43 0 0,0,0 0 0,0,0 10.1183838383838 21.804368019212 0 4.95959595959596 28.0280251025171 0 7.58464646464646 32.6991322866399 0 0 0 chimp,cow,horse,human,macaque,marmoset,orangutan,pig,rabbit, antisense antisense A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0.0037665,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0.00318433,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000226620.1 ENST00000454555.1 chr13:106359218-106414144 4 1232 53688 intergenic -0.73 1 0,0,0 0 0,0,0 0 13.2822232156162 0 0 15.4434324243779 0 0 16.9621889435256 0 0 0 chimp,guinea_pig,horse,human,macaque,marmoset,orangutan,rabbit, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000226620.1 ENST00000415294.1 chr13:106359825-106413747 4 576 53340 intergenic -12.09 0 0,0,0 0 0,0,0 24.9131944444444 13.0944694413198 0 22.3489583333333 15.3028496437945 0 22.6579861111111 16.8229658792651 0 0 0 cat,chimp,dog,elephant,guinea_pig,horse,human,macaque,marmoset,mouse,orangutan,panda,pig,rabbit, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000225562.1 ENST00000414368.1 chr13:106382235-106384063 3 482 1342 intergenic 1.96 0 0,0,1 0 0,0,0 140.383817427386 0 0 97.1618257261411 0 0 98.3112033195021 0 0 0 0 chimp,horse,human,macaque,marmoset,opossum,orangutan,panda,pig,rabbit, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0.002632,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000233532.1 ENST00000439790.1 chr13:107028911-107029723 3 494 314 intergenic 5.35 0 0,1,0 1 0,0,0 0 0 0 0 0 0 0 0 4.08 0 0 chimp,human,macaque,orangutan, lincRNA lincRNA A549@0.165816,AG04450@0.124513,BJ@0.599067,GM12878@0.151686,H1HESC@0,HELAS3@0,HEPG2@0.0058885,HMEC@0.285949,HSMM@0.121328,HUVEC@0.299044,K562@0.005484,MCF7@0,NHEK@0.110695,NHLF@0.0400715,SKNSHRA@0.716392, 0 0 0 0 ENSG00000233532.1 ENST00000435024.1 chr13:107028911-107030565 3 628 1022 intergenic 3.71 0 0,1,0 1 0,0,0 0 0 0 0 0 0 0 0 4.08 0 0 chimp,elephant,human,macaque,orangutan, lincRNA lincRNA A549@0.165816,AG04450@0.124513,BJ@0.599067,GM12878@0.151686,H1HESC@0,HELAS3@0,HEPG2@0.0058885,HMEC@0.285949,HSMM@0.121328,HUVEC@0.299044,K562@0.005484,MCF7@0,NHEK@0.110695,NHLF@0.0400715,SKNSHRA@0.716392, 0 0 0 0 ENSG00000233532.1 ENST00000444865.1 chr13:107029140-107029993 2 737 114 intergenic 5.35 0 0,1,0 0 0,0,0 0 0 0 0 0 0 0 0 4.08 0 0 chimp,human,macaque,orangutan, lincRNA lincRNA A549@0.165816,AG04450@0.124513,BJ@0.599067,GM12878@0.151686,H1HESC@0,HELAS3@0,HEPG2@0.0058885,HMEC@0.285949,HSMM@0.121328,HUVEC@0.299044,K562@0.005484,MCF7@0,NHEK@0.110695,NHLF@0.0400715,SKNSHRA@0.716392, 0 0 0 0 ENSG00000230156.1 ENST00000421601.1 chr13:107306264-107324511 3 1169 17074 intergenic 6.73 0 0,0,0 0 0,0,0 0 17.9370973409863 0 6.45252352437981 18.3787630315099 0 6.55688622754491 31.1913435633126 0 0 0 chimp,human,macaque,marmoset,orangutan, processed_transcript processed_transcript A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0.0084455,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000227248.1 ENST00000449551.1 chr13:108440690-108487799 2 817 46290 intronic 2.60 0 0,0,0 0 0,0,0 0 5.94244977316915 0 0 6.37286670987254 0 8.34271725826193 8.66152516742277 0 0 0 cat,chimp,dog,elephant,horse,human,macaque,marmoset,orangutan,panda,rabbit, sense_intronic sense_intronic A549@0,AG04450@0.458818,BJ@0.04963,GM12878@0,H1HESC@0.273038,HELAS3@0.0364075,HEPG2@0.025204,HMEC@0,HSMM@0,HUVEC@0.388791,K562@0.0203955,MCF7@0.218747,NHEK@0,NHLF@0.0034735,SKNSHRA@0.802727, 0 0 0 0 ENSG00000229938.1 ENST00000412809.1 chr13:109753609-109754267 2 434 222 intronic 3.81 0 0,0,0 0 0,0,0 0 0 43.47 0 0 33.152 0 0 50.271 0 0 chimp,elephant,horse,human,macaque,marmoset,orangutan, antisense antisense A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000236242.1 ENST00000439299.1 chr13:109816250-109853831 4 576 36999 intronic -2.29 1 0,0,0 0 0,0,0 0 10.7250736506392 0 0 9.5654477148031 0 0 11.0014594989054 0 0 0 chimp,dog,elephant,human,macaque,marmoset,orangutan, antisense antisense A549@0.137348,AG04450@0,BJ@0,GM12878@0.0034755,H1HESC@0,HELAS3@0.321827,HEPG2@0.136387,HMEC@0.063537,HSMM@0.175434,HUVEC@0,K562@0,MCF7@0,NHEK@0.0357467,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000223617.1 ENST00000455487.1 chr13:109934321-109940081 2 696 5062 intergenic 1.81 0 0,0,0 0 0,0,0 0 20.9241406558672 163.539 0 0 10.592 0 0 16.924 0 0 chimp,human,macaque,marmoset, lincRNA lincRNA A549@0.146837,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0.107389,HEPG2@0.058619,HMEC@0,HSMM@0.186426,HUVEC@0,K562@0,MCF7@0,NHEK@0.869648,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000236053.1 ENST00000432575.1 chr13:109962483-109964121 2 662 974 intergenic -5.23 0 0,0,1 0 0,0,0 7.85800604229607 19.7926078028747 0 0 5.26694045174538 0 8.45619335347432 7.42505133470226 0 0 0 chimp,human, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0.003433,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 3 10 0 0 ENSG00000229792.1 ENST00000439008.1 chr13:110053043-110053988 2 412 531 intergenic -5.44 1 0,0,0 0 0,0,0 0 55.3220338983051 0 0 3.46516007532957 0 0 3.66101694915254 0 0 0 chimp,human,macaque,marmoset,orangutan, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000234854.1 ENST00000416090.1 chr13:110380629-110382354 3 471 1250 intergenic 0.07 0 0,1,0 0 0,0,0 0 46.656 0 0 52.4248 0 0 55.8848 0 0 0 chimp,human,macaque,marmoset,orangutan, antisense antisense A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000231428.1 ENST00000411690.1 chr13:110705632-110707299 4 433 1228 intergenic -2.13 1 0,0,0 0 0,0,0 0 0 0 0 0 0 0 0 0 0 0 chimp,human,macaque,marmoset,orangutan, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000232814.1 ENST00000417970.1 chr13:111154922-111160526 3 536 5064 exonic 2.88 0 0,0,0 0 0,0,0 22.044776119403 38.5920221169036 0 53.3694029850746 51.1733807266983 36.289 60.009328358209 64.9650473933649 42.092 0 0 chimp,cow,elephant,horse,human,macaque,marmoset,orangutan, antisense antisense A549@0.004027,AG04450@0,BJ@0.0091355,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0.0101215,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0.00373,NHEK@0,NHLF@0,SKNSHRA@0.0084185, 0 0 0 0 ENSG00000229152.1 ENST00000426991.1 chr13:111547406-111551519 2 378 3733 intronic -6.21 0 0,0,0 0 0,0,0 0 0 0 0 0 0 0 0 0 0 0 chimp,human,macaque,marmoset,orangutan, sense_intronic sense_intronic A549@0.530771,AG04450@0.706772,BJ@0.201713,GM12878@5.10787,H1HESC@0.40509,HELAS3@2.44233,HEPG2@0.611972,HMEC@0,HSMM@0.150629,HUVEC@0.161276,K562@3.10371,MCF7@0.186207,NHEK@0.296535,NHLF@0.060635,SKNSHRA@0.715597, 0 0 0 0 ENSG00000225760.1 ENST00000440735.1 chr13:111635654-111642911 2 682 6573 intergenic 13.63 0 0,0,1 0 0,0,0 0 0 0 0 0 8.928 129.041055718475 2.30473147725544 17.823 0 0 cat,chimp,dog,elephant,horse,human,macaque,marmoset,opossum,orangutan,panda,rabbit,rat, lincRNA lincRNA A549@0.975693,AG04450@0.799069,BJ@1.01029,GM12878@1.32953,H1HESC@3.10153,HELAS3@1.82606,HEPG2@2.42096,HMEC@0.580671,HSMM@1.1028,HUVEC@2.72488,K562@6.25938,MCF7@1.69044,NHEK@1.01722,NHLF@1.56226,SKNSHRA@1.56249, 0 0 0 0 ENSG00000225870.1 ENST00000422994.1 chr13:111748185-111755444 3 647 6608 intergenic -1.06 0 0,1,0 0 0,0,0 0 0 0 0 0 0 0 0 0 0 0 chimp,human,orangutan, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000235875.1 ENST00000425094.1 chr13:111766621-111768025 2 775 627 exonic 7.62 0 0,1,0 0 0,0,0 62.88 214.181818181818 50.187 83.3329032258064 278.408293460925 15.226 118.504516129032 232.88038277512 42.344 0 0 chimp,human,macaque,marmoset,orangutan,pig, lincRNA processed_transcript A549@0,AG04450@0,BJ@0.042489,GM12878@0,H1HESC@0.039991,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0.258976, 0 0 0 0 ENSG00000235875.1 ENST00000422836.1 chr13:111767766-111768922 2 491 663 exonic 0 0 0,1,1 0 0,0,0 227.9816700611 52.1809954751131 0 278.545824847251 6.96530920060332 6.3 298.553971486762 30.4374057315234 12.375 0 0 dog,horse,human,macaque,marmoset,mouse,orangutan,pig,rat, lincRNA processed_transcript A549@0,AG04450@0,BJ@0.042489,GM12878@0,H1HESC@0.039991,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0.258976, 0 0 0 0 ENSG00000233644.1 ENST00000423329.1 chr13:111774999-111796611 2 802 20808 intronic -1.05 0 0,1,0 0 0,0,0 0 0.581507112648981 5.016 11.6932668329177 1.17945021145713 5.088 12.0224438902743 1.21313917723952 5.195 0 0 chimp,dog,horse,human,macaque,orangutan,panda, sense_intronic sense_intronic A549@0,AG04450@0.0133775,BJ@0.0207515,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0.0022595,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0.169081, 0 0 0 0 ENSG00000227352.1 ENST00000435037.1 chr13:111796652-111797080 2 319 107 intronic -1.38 0 0,1,0 0 0,0,0 0 0 0 0 0 0 0 0 0 0 0 cat,chimp,dog,elephant,human,macaque,marmoset,orangutan, antisense antisense A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0.0077085,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0.0070805, 0 0 0 0 ENSG00000215881.3 ENST00000401043.3 chr13:112248356-112294426 2 372 45696 intronic -0.20 0 0,1,0 0 0,0,0 0 16.4876356792717 0 0 23.2139136904762 0 0 29.8902529761905 41.27 1 1 chimp,human,macaque,marmoset,orangutan, processed_transcript processed_transcript A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000226903.1 ENST00000440860.1 chr13:112554299-112555490 2 374 815 intergenic -2.12 0 0,0,0 0 0,0,0 0 16.9079754601227 0 0 48.9852760736196 4.208 0 137.569325153374 32.457 0 0 chimp,human,macaque,marmoset,orangutan, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0.007904,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000226903.1 ENST00000412119.1 chr13:112554302-112555250 2 345 601 intergenic 5.62 0 0,0,0 0 0,0,0 39.9420289855072 0 0 69.4521739130435 26.5590682196339 4.208 160.513043478261 94.4126455906822 32.457 0 0 chimp,dog,elephant,horse,human,macaque,marmoset,mouse,opossum,orangutan,platypus,rabbit, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0.007904,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000229520.1 ENST00000418660.1 chr13:112760409-112761196 2 426 359 intergenic 2.10 0 0,0,0 0 0,0,0 0 0 0 119.950704225352 6.94150417827298 2.868 267.87558685446 30.4428969359331 3.108 0 0 cat,chimp,dog,elephant,human,macaque,marmoset,orangutan,panda,rat, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0.021257,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000224243.1 ENST00000421423.1 chr13:112761433-112762329 2 543 351 intergenic -0.02 1 0,0,0 0 0,0,0 0 0 0 0 0 56.815 0 0 128.666 0 0 chimp,human,macaque,orangutan, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0.164301,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000223626.1 ENST00000413637.1 chr13:112976881-112985539 3 654 8000 intergenic 4.56 0 0,0,0 0 0,0,0 0 0 25.239 0 2.324 81.693 0 11.8285 112.816 0 0 chimp,human,macaque,marmoset,orangutan, lincRNA lincRNA A549@0.029165,AG04450@0.0360475,BJ@0.0523765,GM12878@0.0080835,H1HESC@0.031516,HELAS3@0.008079,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0.0187685,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0.115184, 0 0 0 0 ENSG00000237030.1 ENST00000419448.1 chr13:113351145-113371989 2 433 20409 intronic 1.28 0 0,0,0 0 0,0,0 0 2.34636679896124 0 0 1.53187319319908 2.629 0 4.43392620902543 2.761 0 0 chimp,dog,elephant,human,macaque,orangutan, processed_transcript processed_transcript A549@0.050815,AG04450@0.011372,BJ@0.016255,GM12878@0.0621805,H1HESC@0.0405635,HELAS3@0.0498635,HEPG2@0.0752135,HMEC@0,HSMM@0,HUVEC@0.111827,K562@0.087802,MCF7@0.015538,NHEK@0.034654,NHLF@0,SKNSHRA@0.0398805, 0 0 0 0 ENSG00000232684.1 ENST00000446442.1 chr13:113399763-113409007 2 2190 7052 intronic 3.38 1 0,0,0 0 0,0,0 0 0 0 0 0 0 1.41095890410959 1.69058423142371 0 0 0 chimp,human,orangutan, antisense antisense A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0.005307,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000248470.1 ENST00000506034.1 chr13:113517894-113521222 2 1704 1622 intronic 2.07 0 0,0,0 0 0,0,0 31.6026995305164 0 0 43.6572769953052 0 0 134.850938967136 461.959926017263 349.395 0 1 chimp,human,macaque,orangutan, lincRNA lincRNA A549@0.101519,AG04450@0.098331,BJ@0.0665055,GM12878@0.340358,H1HESC@0.686973,HELAS3@0.315454,HEPG2@0.658787,HMEC@0.868962,HSMM@0.097177,HUVEC@0.614466,K562@0.160583,MCF7@0.879592,NHEK@0.244693,NHLF@0.105582,SKNSHRA@0.22179, 0 0 0 0 ENSG00000235280.1 ENST00000446789.1 chr13:113621823-113623138 2 685 628 exonic 10.86 0 0,0,1 0 0,0,0 0 0 15.296 15.9751824817518 1.90286624203822 41.091 17.2467153284672 3.71337579617834 54.486 0 0 human,macaque,orangutan, antisense antisense A549@0.0560035,AG04450@0.0230995,BJ@0,GM12878@0.003412,H1HESC@1.42989,HELAS3@0.61366,HEPG2@3.28157,HMEC@0,HSMM@0.039582,HUVEC@0,K562@0,MCF7@3.56955,NHEK@0,NHLF@0,SKNSHRA@1.76719, 0 0 0 0 ENSG00000231882.1 ENST00000424635.1 chr13:113782469-113783194 2 415 308 intronic 1.07 0 0,0,1 0 0,0,0 0 0 0 0 0 15.252 0 0 74.413 0 0 NA antisense antisense A549@0,AG04450@0,BJ@0.0310415,GM12878@0,H1HESC@0.0287105,HELAS3@0.044093,HEPG2@0.0615285,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0.0217635, 0 0 0 0 ENSG00000225083.1 ENST00000419199.1 chr13:114005988-114010049 2 865 3194 exonic 8.07 0 0,0,1 0 0,0,0 36.4161849710983 0 0 56.2820809248555 0 26.022 68.9826589595376 44.6881653099562 42.347 0 0 chimp,human,macaque,marmoset,orangutan, antisense antisense A549@0.0035805,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0.002606,HEPG2@0,HMEC@0,HSMM@0.002373,HUVEC@0,K562@0,MCF7@0.005912,NHEK@0,NHLF@0.009002,SKNSHRA@0, 0 0 0 0 ENSG00000225083.1 ENST00000423246.1 chr13:114006131-114016183 2 463 9587 intronic 10.56 0 0,0,0 0 0,0,0 0 3.28569938458329 0 0 5.0781266298112 26.022 0 21.1123396265777 42.347 0 0 chimp,human,macaque,marmoset,orangutan, antisense antisense A549@0.0035805,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0.002606,HEPG2@0,HMEC@0,HSMM@0.002373,HUVEC@0,K562@0,MCF7@0.005912,NHEK@0,NHLF@0.009002,SKNSHRA@0, 0 0 0 0 ENSG00000227608.1 ENST00000422615.1 chr13:114110944-114116670 2 419 5305 exonic -9.44 0 0,0,0 0 0,0,0 0 1.61734213006598 0 0 17.302356267672 5.024 0 28.8311027332705 6.53 0 0 chimp,human,macaque,marmoset,orangutan, antisense antisense A549@0.202013,AG04450@0.010918,BJ@0.011496,GM12878@0,H1HESC@0,HELAS3@0.032571,HEPG2@0.0568945,HMEC@0,HSMM@0.035266,HUVEC@0.0173265,K562@0.043172,MCF7@0.0337535,NHEK@0.064344,NHLF@0.0046345,SKNSHRA@0, 0 0 0 0 ENSG00000233613.1 ENST00000414992.1 chr13:114123216-114130450 2 328 6904 intronic 0.86 0 0,0,0 0 0,0,0 0 3.60370799536501 0 0 6.52549246813442 0 0 45.1616454229432 0 0 0 chimp,human,macaque,orangutan, antisense antisense A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000233613.1 ENST00000453584.1 chr13:114129705-114130450 2 317 426 intronic 0.86 0 0,0,0 0 0,0,0 0 0 0 0 0 0 0 0 0 0 0 chimp,human,macaque,orangutan, antisense antisense A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000233695.1 ENST00000458001.1 chr13:114518603-114542321 5 768 22942 exonic -3.24 0 0,1,1 0 0,0,0 24.8645833333333 1.79413303112196 0 70.8216145833333 12.8178885886148 0 151.6875 66.514122569959 78.651 0 0 cat,chimp,cow,dog,elephant,guinea_pig,horse,human,macaque,marmoset,orangutan,panda,rabbit,rat, antisense antisense A549@0.328685,AG04450@0.160412,BJ@0.0031305,GM12878@0.0222605,H1HESC@0.023177,HELAS3@0.0250075,HEPG2@0.0345155,HMEC@0.058268,HSMM@0.197147,HUVEC@0.044381,K562@0.027556,MCF7@0.115594,NHEK@0.0177693,NHLF@0.133322,SKNSHRA@1.05198, 0 0 0 0 ENSG00000237699.1 ENST00000449453.1 chr13:114580581-114582349 2 342 1424 intergenic 0 0 0,0,1 0 0,0,0 0 0 0 0 0 0 0 0 69.454 0 0 chimp,human,macaque,marmoset,orangutan, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0.0312755, 0 0 0 0 ENSG00000226921.1 ENST00000442500.1 chr13:114581673-114584465 2 776 2014 intergenic -0.71 0 0,0,0 0 0,0,0 0 0 0 0 0 0 0 1.93247269116187 0 0 0 chimp,human,macaque,marmoset,orangutan, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0.009939,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000226921.1 ENST00000430978.1 chr13:114582226-114586528 4 559 3737 intergenic 1.23 0 0,0,0 0 0,0,0 0 0 0 0 0 0 136.744186046512 14.6293818571046 98.28 0 0 chimp,human,macaque,marmoset,orangutan, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0.009939,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000226921.1 ENST00000425483.1 chr13:114583505-114584459 2 501 451 intergenic 1.23 0 0,0,0 0 0,0,0 0 0 0 0 0 0 0 0 0 0 0 chimp,human,macaque,marmoset,orangutan, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0.009939,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000230544.1 ENST00000455857.1 chr13:114586640-114588308 2 523 1143 intergenic -8.25 0 0,1,0 0 0,0,0 0 0 0 0 0 0 72.0344168260038 0 188.37 0 0 chimp,human,macaque,marmoset,orangutan, lincRNA lincRNA A549@0,AG04450@0.010628,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0.0051915,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000229373.2 ENST00000426859.1 chr13:114598076-114624290 8 1599 24601 intergenic 25.11 1 0,0,0 0 0,0,0 0 0 0 0 0.639486199747978 0 1.36772983114447 37.2161294256331 0 0 0 chimp,human,macaque,orangutan, lincRNA lincRNA A549@0.0023365,AG04450@0.166672,BJ@0.018191,GM12878@0,H1HESC@0.0007485,HELAS3@0.0025975,HEPG2@0.003752,HMEC@0.124676,HSMM@0.0071585,HUVEC@0,K562@0,MCF7@0,NHEK@0.205692,NHLF@0.0248235,SKNSHRA@0, 0 0 0 0 ENSG00000229373.2 ENST00000535320.1 chr13:114601498-114626485 8 2764 22209 intergenic 26.03 0 0,1,1 0 0,0,0 0 0 0 0 0.708361475077671 0 18.9301736613603 38.8789229591607 0 0 1 chimp,human,macaque,orangutan, lincRNA lincRNA A549@0.0023365,AG04450@0.166672,BJ@0.018191,GM12878@0,H1HESC@0.0007485,HELAS3@0.0025975,HEPG2@0.003752,HMEC@0.124676,HSMM@0.0071585,HUVEC@0,K562@0,MCF7@0,NHEK@0.205692,NHLF@0.0248235,SKNSHRA@0, 0 0 0 0 ENSG00000232487.1 ENST00000454005.1 chr13:114873044-114874295 2 378 871 intronic 0 0 0,0,0 0 0,0,0 0 0 0 0 0 0 33.542328042328 73.2709529276693 0 0 0 chimp,human,macaque,marmoset,orangutan, sense_intronic sense_intronic A549@0,AG04450@0.0342955,BJ@0.0220685,GM12878@0.0129225,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0.0318895, 0 0 0 0 ENSG00000229723.1 ENST00000446989.1 chr13:115095034-115099423 3 511 3874 intergenic -2.16 0 0,0,0 0 0,0,0 0 0 38.44 0 0 41.85 20.600782778865 0 44.02 0 0 chimp,human,macaque,marmoset,orangutan, antisense antisense A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0.12661,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0.008828, 0 0 0 0 ENSG00000225210.1 ENST00000432001.1 chr14:19650018-19691922 3 765 41135 encompassing -2.36 0 0,1,0 0 0,0,0 0 0 0 0 0.50212714233621 0 32.3424836601307 48.2902394554516 0 0 0 cat,chimp,dog,elephant,guinea_pig,horse,human,macaque,marmoset,orangutan,panda,pig,rabbit, processed_transcript processed_transcript A549@39.0163,AG04450@0.032702,BJ@0.0803825,GM12878@0.790629,H1HESC@0,HELAS3@41.9862,HEPG2@59.6172,HMEC@0.392264,HSMM@2.01386,HUVEC@0.185638,K562@22.6962,MCF7@44.6472,NHEK@0.415641,NHLF@2.59495,SKNSHRA@47.3841, 0 0 0 0 ENSG00000225210.1 ENST00000412017.1 chr14:19650021-19691583 4 545 41011 encompassing 4.94 0 0,1,1 0 0,0,0 0 0 0 0 0.503645363439077 0 0 48.4362488112945 0 0 0 cat,chimp,cow,dog,elephant,human,macaque,marmoset,orangutan,pig, processed_transcript processed_transcript A549@39.0163,AG04450@0.032702,BJ@0.0803825,GM12878@0.790629,H1HESC@0,HELAS3@41.9862,HEPG2@59.6172,HMEC@0.392264,HSMM@2.01386,HUVEC@0.185638,K562@22.6962,MCF7@44.6472,NHEK@0.415641,NHLF@2.59495,SKNSHRA@47.3841, 0 0 0 0 ENSG00000225210.1 ENST00000455088.1 chr14:19650028-19692647 8 2094 40511 encompassing 1.18 0 0,1,0 0 0,0,0 0 0 0 0 0.50986151909358 0 31.8624641833811 49.0340648219002 0 0 0 chimp,guinea_pig,human,macaque,marmoset,orangutan, processed_transcript processed_transcript A549@39.0163,AG04450@0.032702,BJ@0.0803825,GM12878@0.790629,H1HESC@0,HELAS3@41.9862,HEPG2@59.6172,HMEC@0.392264,HSMM@2.01386,HUVEC@0.185638,K562@22.6962,MCF7@44.6472,NHEK@0.415641,NHLF@2.59495,SKNSHRA@47.3841, 0 0 0 0 ENSG00000225210.1 ENST00000441500.1 chr14:19650032-19692921 8 2390 40485 encompassing 0.49 1 0,1,0 0 0,0,0 0 0 0 0 0.510188958873657 0 27.9163179916318 49.0655551438805 0 0 0 chimp,human,macaque,marmoset,orangutan, processed_transcript processed_transcript A549@39.0163,AG04450@0.032702,BJ@0.0803825,GM12878@0.790629,H1HESC@0,HELAS3@41.9862,HEPG2@59.6172,HMEC@0.392264,HSMM@2.01386,HUVEC@0.185638,K562@22.6962,MCF7@44.6472,NHEK@0.415641,NHLF@2.59495,SKNSHRA@47.3841, 0 0 0 0 ENSG00000225210.1 ENST00000418499.1 chr14:19650037-19684290 8 1393 32846 intergenic -0.12 0 0,1,0 0 0,0,0 0 0 0 0 0.628843694818243 0 0 60.476739937892 0 0 0 chimp,human,macaque,marmoset,orangutan, processed_transcript processed_transcript A549@39.0163,AG04450@0.032702,BJ@0.0803825,GM12878@0.790629,H1HESC@0,HELAS3@41.9862,HEPG2@59.6172,HMEC@0.392264,HSMM@2.01386,HUVEC@0.185638,K562@22.6962,MCF7@44.6472,NHEK@0.415641,NHLF@2.59495,SKNSHRA@47.3841, 0 0 0 0 ENSG00000225210.1 ENST00000431094.1 chr14:19650064-19695180 4 4112 40998 encompassing 1.01 1 0,1,0 0 0,0,0 0 0 0 0 0.503805063661642 0 16.2256809338521 48.4516073954827 0 0 0 chimp,human,macaque,orangutan, processed_transcript processed_transcript A549@39.0163,AG04450@0.032702,BJ@0.0803825,GM12878@0.790629,H1HESC@0,HELAS3@41.9862,HEPG2@59.6172,HMEC@0.392264,HSMM@2.01386,HUVEC@0.185638,K562@22.6962,MCF7@44.6472,NHEK@0.415641,NHLF@2.59495,SKNSHRA@47.3841, 0 0 0 0 ENSG00000225210.1 ENST00000438128.1 chr14:19650066-19681593 2 1058 30467 intergenic -9.30 0 0,1,0 0 0,0,0 0 0 0 0 0.677946630780845 0 0 65.1990350214987 0 0 0 chimp,human,macaque,marmoset,orangutan, processed_transcript processed_transcript A549@39.0163,AG04450@0.032702,BJ@0.0803825,GM12878@0.790629,H1HESC@0,HELAS3@41.9862,HEPG2@59.6172,HMEC@0.392264,HSMM@2.01386,HUVEC@0.185638,K562@22.6962,MCF7@44.6472,NHEK@0.415641,NHLF@2.59495,SKNSHRA@47.3841, 0 0 0 0 ENSG00000225210.1 ENST00000427798.1 chr14:19653940-19681519 2 988 26589 intergenic -9.30 0 0,0,0 0 0,0,0 0 0 0 0 0.776825002820715 0 0 74.7083004249878 0 0 0 chimp,human,macaque,marmoset,orangutan, processed_transcript processed_transcript A549@39.0163,AG04450@0.032702,BJ@0.0803825,GM12878@0.790629,H1HESC@0,HELAS3@41.9862,HEPG2@59.6172,HMEC@0.392264,HSMM@2.01386,HUVEC@0.185638,K562@22.6962,MCF7@44.6472,NHEK@0.415641,NHLF@2.59495,SKNSHRA@47.3841, 0 0 0 0 ENSG00000228294.1 ENST00000413661.1 chr14:19670792-19681014 3 720 9498 intergenic -3.55 1 0,0,0 0 0,0,0 0 0 0 0 0 0 225.777777777778 22.5740155822278 0 0 0 human, antisense antisense A549@0.008587,AG04450@0,BJ@0.014846,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0.0131055,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0.082331, 0 0 0 0 ENSG00000228294.1 ENST00000444357.1 chr14:19670906-19686002 3 549 14543 exonic -3.55 1 0,0,0 0 0,0,0 0 0 0 0 0 0 275.096539162113 14.7430378876435 0 0 0 human,orangutan, antisense antisense A549@0.008587,AG04450@0,BJ@0.014846,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0.0131055,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0.082331, 0 0 0 0 ENSG00000249549.1 ENST00000493038.2 chr14:19858667-19941024 2 2739 79616 encompassing 2.86 0 0,0,0 0 0,0,0 0 0.261655948553055 0 2.00693683826214 2.32972015675241 0 3.59328221978824 38.302652733119 0 1 1 chimp,human,macaque,marmoset,orangutan, lincRNA lincRNA A549@1.57815,AG04450@0.0046265,BJ@0.0011805,GM12878@0.0147165,H1HESC@0,HELAS3@1.46191,HEPG2@3.93049,HMEC@0,HSMM@0.0013905,HUVEC@0.002799,K562@0.4346,MCF7@0.713076,NHEK@0.00356367,NHLF@0.0019525,SKNSHRA@1.40023, 0 0 0 0 ENSG00000254846.1 ENST00000528210.1 chr14:20812392-20815047 2 466 2187 exonic -6.63 0 0,1,0 0 0,0,0 18.68669527897 10.9053497942387 9.33 30.7038626609442 17.5281207133059 14.308 33.4678111587983 22.0914494741655 15.4 0 0 cat,chimp,human,macaque,marmoset,orangutan,pig, antisense antisense A549@0.005902,AG04450@0.005032,BJ@0,GM12878@0.016266,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0.009853,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000257096.1 ENST00000535893.1 chr14:21989234-21990794 2 470 1088 exonic -7.14 0 0,1,0 0 0,0,0 266.655319148936 33.7472426470588 51.466 260.31914893617 71.2205882352941 73.945 226.610638297872 146.106617647059 70.05 0 0 cat,chimp,cow,dog,elephant,guinea_pig,horse,human,macaque,marmoset,mouse,opossum,orangutan,panda,pig,rabbit,rat, antisense antisense A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0.0043595,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000248358.2 ENST00000542992.1 chr14:22183018-22184486 2 568 898 intergenic -1.23 0 0,0,0 0 0,0,0 0 0 0 0 0 0 0 0 0 0 1 chimp,human,macaque,orangutan, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000251002.2 ENST00000514473.2 chr14:22849083-22951948 3 1948 100913 intronic 0.32 0 1,1,1 0 0,0,0 16.208932238193 20.1355226779503 79.508 481.878850102669 26.0601409134601 120.163 45.6699178644764 26.8670537988168 134.937 0 0 chimp,cow,dog,human,macaque,marmoset,mouse, lincRNA retained_intron A549@0.010894,AG04450@0.001149,BJ@0,GM12878@14.0524,H1HESC@0,HELAS3@0,HEPG2@0.0055525,HMEC@0,HSMM@0.018109,HUVEC@0,K562@0.025388,MCF7@0,NHEK@0.00130867,NHLF@0,SKNSHRA@0.101314, 0 0 0 0 ENSG00000251002.2 ENST00000545498.1 chr14:22849897-22851572 3 339 1332 intronic -2.47 0 0,1,0 0 0,0,0 0 10.1463963963964 0 5.11504424778761 5.73723723723724 0 5.2212389380531 11.9204204204204 0 0 0 cat,chimp,elephant,human,macaque,marmoset,orangutan,panda,rabbit, lincRNA lincRNA A549@0.010894,AG04450@0.001149,BJ@0,GM12878@14.0524,H1HESC@0,HELAS3@0,HEPG2@0.0055525,HMEC@0,HSMM@0.018109,HUVEC@0,K562@0.025388,MCF7@0,NHEK@0.00130867,NHLF@0,SKNSHRA@0.101314, 0 0 0 0 ENSG00000251002.2 ENST00000541008.1 chr14:22849969-22901731 6 570 51182 intronic 3.36 0 0,1,1 0 0,0,0 72.359649122807 22.3602242976046 147.38 63.5912280701754 23.7736704310109 124.493 87.5578947368421 24.5950920245399 119.907 0 0 cat,chimp,cow,dog,elephant,horse,human,macaque,marmoset,orangutan,rabbit,rat, lincRNA lincRNA A549@0.010894,AG04450@0.001149,BJ@0,GM12878@14.0524,H1HESC@0,HELAS3@0,HEPG2@0.0055525,HMEC@0,HSMM@0.018109,HUVEC@0,K562@0.025388,MCF7@0,NHEK@0.00130867,NHLF@0,SKNSHRA@0.101314, 0 0 0 0 ENSG00000251002.2 ENST00000545670.1 chr14:22850513-22901731 4 567 50645 intronic 3.36 0 0,1,0 0 0,0,0 72.7425044091711 22.3304571033666 147.38 67.8624338624339 23.9189258564518 124.493 86.9329805996473 24.6561950834238 119.907 0 0 cat,chimp,cow,dog,elephant,horse,human,macaque,marmoset,orangutan,pig,rabbit, lincRNA retained_intron A549@0.010894,AG04450@0.001149,BJ@0,GM12878@14.0524,H1HESC@0,HELAS3@0,HEPG2@0.0055525,HMEC@0,HSMM@0.018109,HUVEC@0,K562@0.025388,MCF7@0,NHEK@0.00130867,NHLF@0,SKNSHRA@0.101314, 0 0 0 0 ENSG00000251002.2 ENST00000535351.1 chr14:22850773-22901719 5 566 50372 intronic 7.67 0 0,1,0 0 0,0,0 60.8922261484099 22.4514809814977 154.16 46.708480565371 24.0485587231001 132.569 73.0759717314488 24.7029897562138 127.899 0 0 chimp,cow,dog,elephant,horse,human,macaque,marmoset,orangutan,panda,pig, lincRNA lincRNA A549@0.010894,AG04450@0.001149,BJ@0,GM12878@14.0524,H1HESC@0,HELAS3@0,HEPG2@0.0055525,HMEC@0,HSMM@0.018109,HUVEC@0,K562@0.025388,MCF7@0,NHEK@0.00130867,NHLF@0,SKNSHRA@0.101314, 0 0 0 0 ENSG00000251002.2 ENST00000537850.1 chr14:22887345-22901731 2 653 13731 intronic -3.65 0 0,1,0 0 0,0,0 63.1623277182236 10.0477022795135 147.38 57.0796324655436 10.5727914937004 124.493 80.1914241960184 11.8041657563178 119.907 0 0 cat,chimp,cow,dog,elephant,guinea_pig,horse,human,macaque,marmoset,orangutan,panda,pig,rabbit, lincRNA processed_transcript A549@0.010894,AG04450@0.001149,BJ@0,GM12878@14.0524,H1HESC@0,HELAS3@0,HEPG2@0.0055525,HMEC@0,HSMM@0.018109,HUVEC@0,K562@0.025388,MCF7@0,NHEK@0.00130867,NHLF@0,SKNSHRA@0.101314, 0 0 0 0 ENSG00000256590.1 ENST00000535880.1 chr14:22938035-22938690 2 421 232 intronic 0 0 0,0,0 0 0,0,0 0 0 0 53.3230403800475 8.79310344827586 0 60.2897862232779 12.5646551724138 0 0 0 cat,chimp,cow,dog,elephant,guinea_pig,horse,human,macaque,marmoset,mouse,opossum,orangutan,panda,platypus,rabbit,rat, antisense antisense A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000237054.1 ENST00000424245.1 chr14:23388665-23392610 2 2096 1847 exonic 3.48 0 0,0,0 0 0,0,0 90.9222328244275 67.7211694639957 26.732 100.753816793893 90.7379534380076 74.05 108.74284351145 90.4428803465078 80.673 0 0 cat,cow,dog,elephant,human,macaque,marmoset,orangutan,panda, antisense antisense A549@0.031614,AG04450@0.0172195,BJ@0.0015425,GM12878@0.111325,H1HESC@0.0796815,HELAS3@0.076789,HEPG2@0.0994075,HMEC@0,HSMM@0.0071335,HUVEC@0.016846,K562@0.009893,MCF7@0.052393,NHEK@0.001217,NHLF@0,SKNSHRA@0.02797, 0 0 0 0 ENSG00000237054.1 ENST00000457443.1 chr14:23390213-23392610 2 438 1957 exonic -0.72 0 0,1,0 0 0,0,0 83.9474885844749 63.9146653040368 153.361 191.885844748858 95.2999489013797 107.04 215.837899543379 96.252427184466 110.776 0 0 cat,chimp,dog,elephant,guinea_pig,human,macaque,marmoset,mouse,orangutan,rabbit, antisense antisense A549@0.031614,AG04450@0.0172195,BJ@0.0015425,GM12878@0.111325,H1HESC@0.0796815,HELAS3@0.076789,HEPG2@0.0994075,HMEC@0,HSMM@0.0071335,HUVEC@0.016846,K562@0.009893,MCF7@0.052393,NHEK@0.001217,NHLF@0,SKNSHRA@0.02797, 0 0 0 0 ENSG00000257056.1 ENST00000535153.1 chr14:29252697-29254990 2 1650 641 intronic 2.42 1 0,0,0 0 0,0,0 109.938181818182 0 0 91.0818181818182 0 0 81.4727272727273 0 0 0 0 chimp,cow,elephant,human,macaque,marmoset,orangutan,panda,rabbit, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0.0056755,H1HESC@0.152578,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0.002336,SKNSHRA@0, 0 0 0 0 ENSG00000248975.1 ENST00000508469.1 chr14:30637041-30766245 4 913 128285 intergenic -2.37 0 0,0,0 0 0,0,0 0 56.3398682620727 54.72 4.74808324205915 62.9443270842265 46.143 5.06462212486309 67.005994465448 40.097 0 1 chimp,human,marmoset,orangutan, lincRNA lincRNA A549@0,AG04450@0.086242,BJ@0.0391915,GM12878@0.0237535,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0.004972,HUVEC@0,K562@0.127674,MCF7@0,NHEK@0,NHLF@0.0084165,SKNSHRA@0, 0 0 0 0 ENSG00000250365.1 ENST00000502430.1 chr14:31889962-31922086 4 1208 30910 intronic -2.66 0 1,1,1 1 0,0,0 0.910596026490066 17.629634422517 0 8.10264900662252 17.2925913943708 35.334 9.63990066225166 20.682109349725 35.709 0 0 chimp,cow,dog,guinea_pig,horse,human,macaque,marmoset,orangutan,panda,rat, lincRNA lincRNA A549@0.0472775,AG04450@0.041248,BJ@0.0410105,GM12878@0.277034,H1HESC@0.0390305,HELAS3@0.216833,HEPG2@0.224218,HMEC@0.027027,HSMM@0.005459,HUVEC@0.019559,K562@0.129543,MCF7@0.036945,NHEK@0.008426,NHLF@0.033557,SKNSHRA@0.0817935, 0 0 0 0 ENSG00000253563.1 ENST00000521292.1 chr14:36988521-36991722 2 1236 1963 exonic 8.99 0 0,1,1 0 0,1,0 206.770226537217 291.074885379521 250.608 253.398867313916 298.897605705553 316.637 247.540453074434 266.570555272542 299.205 0 0 chimp,cow,elephant,horse,human,macaque,marmoset,mouse,orangutan,panda,pig,rat, antisense antisense A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0.002351,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0.002834,NHEK@0,NHLF@0,SKNSHRA@0.004345, 0 0 0 0 ENSG00000254868.2 ENST00000533625.1 chr14:38080456-38510647 19 3548 426607 encompassing 49.12 0 0,1,1 0 0,0,0 15.7849492671928 9.6676613370151 0 142.737316798196 15.0626501674844 1.35 152.996617812852 16.8805973647877 4.017 0 0 chimp,elephant,human,macaque,marmoset,orangutan,pig, processed_transcript processed_transcript A549@0.0563945,AG04450@0.0050245,BJ@0.005551,GM12878@0,H1HESC@0.0037175,HELAS3@0.389499,HEPG2@0.894315,HMEC@0.001148,HSMM@0.001278,HUVEC@0,K562@0.002548,MCF7@0.163197,NHEK@0.00199133,NHLF@0.000547,SKNSHRA@0, 0 0 0 0 ENSG00000254868.2 ENST00000546321.1 chr14:38091270-38165965 4 1319 73370 intergenic 3.89 0 0,0,1 0 0,0,0 10.5291887793783 9.22421970832766 0 62.1675511751327 12.2418427150061 2.537 63.0106141015921 13.6972604606788 2.356 0 0 cat,chimp,cow,dog,elephant,guinea_pig,human,macaque,marmoset,mouse,orangutan,panda,pig,rabbit, processed_transcript processed_transcript A549@0.0563945,AG04450@0.0050245,BJ@0.005551,GM12878@0,H1HESC@0.0037175,HELAS3@0.389499,HEPG2@0.894315,HMEC@0.001148,HSMM@0.001278,HUVEC@0,K562@0.002548,MCF7@0.163197,NHEK@0.00199133,NHLF@0.000547,SKNSHRA@0, 0 0 0 0 ENSG00000251363.1 ENST00000515218.1 chr14:41423916-41445068 4 866 20280 intergenic -3.30 0 0,0,0 0 0,0,0 0 0 0 4.13972286374134 0 0 5.43302540415704 0.471597633136095 0 0 0 chimp,human,macaque,marmoset,orangutan,panda,pig, lincRNA lincRNA A549@0.053762,AG04450@0.010305,BJ@0.098617,GM12878@0.02453,H1HESC@4.53557,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0.00262,HUVEC@0.036788,K562@0.054259,MCF7@0,NHEK@0.095992,NHLF@0.0134315,SKNSHRA@2.87852, 0 0 0 0 ENSG00000249163.1 ENST00000506005.1 chr14:45552254-45553180 3 794 128 intergenic 1.34 1 0,1,0 0 0,0,0 0 0 14.392 2.18639798488665 0 30.228 2.21284634760705 0 30.28 1 1 chimp,human,macaque,marmoset,orangutan, lincRNA lincRNA A549@0.0069315,AG04450@0,BJ@0,GM12878@0.073762,H1HESC@0.0125085,HELAS3@0.01134,HEPG2@0.006845,HMEC@0,HSMM@0,HUVEC@0,K562@0.0067185,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000237356.1 ENST00000454942.1 chr14:53635772-53793429 4 510 157141 intergenic -0.75 0 0,0,0 0 0,0,0 2.45882352941176 2.46164272850497 0 0 3.38810367758892 5.497 0 5.20409059379793 34.104 0 0 chimp,human,macaque,marmoset,orangutan, processed_transcript processed_transcript A549@0.575615,AG04450@0.355765,BJ@0.077225,GM12878@0.14752,H1HESC@0.76862,HELAS3@0.190251,HEPG2@0.193032,HMEC@0.029143,HSMM@0.004056,HUVEC@0.454626,K562@0.018432,MCF7@0.141524,NHEK@0.121741,NHLF@0.0631045,SKNSHRA@0.27944, 0 0 0 0 ENSG00000237356.1 ENST00000456100.1 chr14:53684430-54153976 4 558 468982 intergenic 0 0 0,1,0 1 0,0,0 2.24731182795699 20.2572870600578 0 0 30.5192779253788 0 0 32.930713758737 0 0 0 chimp,human,macaque,marmoset,orangutan, processed_transcript processed_transcript A549@0.575615,AG04450@0.355765,BJ@0.077225,GM12878@0.14752,H1HESC@0.76862,HELAS3@0.190251,HEPG2@0.193032,HMEC@0.029143,HSMM@0.004056,HUVEC@0.454626,K562@0.018432,MCF7@0.141524,NHEK@0.121741,NHLF@0.0631045,SKNSHRA@0.27944, 0 0 0 0 ENSG00000237356.1 ENST00000435322.1 chr14:53684609-53836219 4 562 151042 intergenic 4.22 0 0,1,0 0 0,0,0 2.23131672597865 10.8881503158062 0 0 13.1078640378173 0 0 14.5570371155043 0 0 0 chimp,horse,human,orangutan, processed_transcript processed_transcript A549@0.575615,AG04450@0.355765,BJ@0.077225,GM12878@0.14752,H1HESC@0.76862,HELAS3@0.190251,HEPG2@0.193032,HMEC@0.029143,HSMM@0.004056,HUVEC@0.454626,K562@0.018432,MCF7@0.141524,NHEK@0.121741,NHLF@0.0631045,SKNSHRA@0.27944, 0 0 0 0 ENSG00000237356.1 ENST00000425648.1 chr14:53836099-53992960 2 551 156308 intergenic -0.91 0 0,0,0 0 0,0,0 0 16.7829989507895 286.349 0 28.3188000614172 208.378 0 31.4102988970494 230.994 0 0 cat,chimp,dog,elephant,guinea_pig,horse,human,macaque,marmoset,orangutan,panda, processed_transcript processed_transcript A549@0.575615,AG04450@0.355765,BJ@0.077225,GM12878@0.14752,H1HESC@0.76862,HELAS3@0.190251,HEPG2@0.193032,HMEC@0.029143,HSMM@0.004056,HUVEC@0.454626,K562@0.018432,MCF7@0.141524,NHEK@0.121741,NHLF@0.0631045,SKNSHRA@0.27944, 0 0 0 0 ENSG00000225680.1 ENST00000436530.1 chr14:54066550-54080744 2 724 13468 intergenic 0.71 0 0,1,0 0 0,0,0 101.033149171271 14.979506979507 0 192.779005524862 12.9253786753787 66.264 191.976519337017 25.740198990199 65.65 0 0 chimp,cow,elephant,guinea_pig,horse,human,macaque,marmoset,mouse,panda,rat, lincRNA lincRNA A549@0.097047,AG04450@0.0437175,BJ@0,GM12878@0,H1HESC@0,HELAS3@0.120738,HEPG2@1.26315,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0.0083705,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000235269.1 ENST00000418927.1 chr14:54235660-54317600 4 598 81336 intergenic 0.36 0 0,0,0 0 0,0,0 0 15.7629462968427 11.107 0 30.4955985049671 94.524 0 30.8975361463559 105.369 0 0 chimp,cow,guinea_pig,human,macaque,marmoset,orangutan,panda,pig, lincRNA lincRNA A549@3.1636,AG04450@0.003723,BJ@0.020099,GM12878@0,H1HESC@0.0148095,HELAS3@0.181809,HEPG2@0.978606,HMEC@0.417765,HSMM@0.0205075,HUVEC@0.382362,K562@0.0044475,MCF7@0.0169255,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000186615.5 ENST00000412224.2 chr14:56024690-56046828 4 2181 19951 intergenic 4.14 0 0,1,0 1 0,1,0 18.2631820265933 3.96621723221894 62.345 0 4.17242243496567 105.874 0.891334250343879 6.08285298982507 106.603 0 1 chimp,human,marmoset,orangutan, lincRNA lincRNA A549@2.39438,AG04450@0.680793,BJ@0.476248,GM12878@0.929949,H1HESC@1.34709,HELAS3@1.69177,HEPG2@0.918365,HMEC@0.271625,HSMM@0.754617,HUVEC@0.250545,K562@2.13385,MCF7@0.51927,NHEK@0.600654,NHLF@0.724027,SKNSHRA@1.0459, 0 0 0 0 ENSG00000186615.5 ENST00000335142.4 chr14:56042875-56046810 3 1509 2422 intergenic -0.07 0 1,1,1 1 0,1,0 26.3962889330683 14.706440957886 62.345 1.15043074884029 1.79108175061932 105.874 2.48972829688535 6.64863748967795 106.603 0 0 chimp,elephant,horse,human,macaque,marmoset,orangutan, lincRNA lincRNA A549@2.39438,AG04450@0.680793,BJ@0.476248,GM12878@0.929949,H1HESC@1.34709,HELAS3@1.69177,HEPG2@0.918365,HMEC@0.271625,HSMM@0.754617,HUVEC@0.250545,K562@2.13385,MCF7@0.51927,NHEK@0.600654,NHLF@0.724027,SKNSHRA@1.0459, 0 0 0 0 ENSG00000186615.5 ENST00000535211.1 chr14:56042905-56046814 2 1352 2555 intergenic -0.07 0 1,1,1 1 0,1,0 0 29.680626223092 62.345 1.28402366863905 1.69784735812133 105.874 1.34097633136095 7.06340508806262 106.603 0 0 chimp,elephant,horse,human,macaque,marmoset,orangutan, lincRNA lincRNA A549@2.39438,AG04450@0.680793,BJ@0.476248,GM12878@0.929949,H1HESC@1.34709,HELAS3@1.69177,HEPG2@0.918365,HMEC@0.271625,HSMM@0.754617,HUVEC@0.250545,K562@2.13385,MCF7@0.51927,NHEK@0.600654,NHLF@0.724027,SKNSHRA@1.0459, 0 0 0 0 ENSG00000248550.2 ENST00000534909.1 chr14:57279901-57397548 4 2421 115220 intergenic -6.72 0 0,0,1 0 0,0,0 65.3882693102024 70.4649019267488 221.888 63.8674101610905 73.2310449574727 220.993 65.2118959107807 74.916837354626 235.686 0 0 chimp,guinea_pig,human,macaque,marmoset,orangutan, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0.0164005,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000131951.5 ENST00000254271.4 chr14:60386431-60530277 33 4882 138900 intergenic 0.39 0 0,0,0 0 0,1,0 289.600368701352 3.11809215262779 0 432.903727980336 4.46113030957523 2.943 437.16837361737 6.15290856731461 3.024 0 0 cat,chimp,cow,dog,elephant,guinea_pig,horse,human,macaque,marmoset,opossum,orangutan,panda,rabbit,rat, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0.0004275,H1HESC@0.031957,HELAS3@0,HEPG2@0.004584,HMEC@0,HSMM@0,HUVEC@0,K562@0.0010415,MCF7@0.000436,NHEK@0.000830333,NHLF@0,SKNSHRA@0.000482, 0 0 0 0 ENSG00000131951.5 ENST00000445360.1 chr14:60386431-60530277 32 4685 139099 intergenic 0.39 0 0,0,0 0 0,1,0 296.947918890075 3.27363244883141 0 440.955816435432 4.79783463576302 2.943 447.110138740662 6.42919072027836 3.024 0 0 cat,chimp,cow,dog,elephant,guinea_pig,horse,human,macaque,marmoset,opossum,orangutan,panda,rabbit,rat, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0.0004275,H1HESC@0.031957,HELAS3@0,HEPG2@0.004584,HMEC@0,HSMM@0,HUVEC@0,K562@0.0010415,MCF7@0.000436,NHEK@0.000830333,NHLF@0,SKNSHRA@0.000482, 0 0 0 0 ENSG00000131951.5 ENST00000454474.1 chr14:60386431-60530277 33 4867 138915 intergenic 0.39 0 0,0,0 0 0,1,0 288.911855352373 3.17314904797898 0 433.956235874255 4.47084188172623 2.943 438.363468255599 6.15759997120541 3.024 0 0 cat,chimp,cow,dog,elephant,guinea_pig,horse,human,macaque,marmoset,opossum,orangutan,panda,rabbit,rat, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0.0004275,H1HESC@0.031957,HELAS3@0,HEPG2@0.004584,HMEC@0,HSMM@0,HUVEC@0,K562@0.0010415,MCF7@0.000436,NHEK@0.000830333,NHLF@0,SKNSHRA@0.000482, 0 0 0 0 ENSG00000254718.1 ENST00000532515.1 chr14:60706839-60712371 2 2857 2673 intergenic 6.24 0 0,1,0 0 0,0,0 0 4.60905349794239 0 0 2.81107369996259 15.261 1.25901295064753 2.91806958473625 15.49 0 0 chimp,dog,horse,human,macaque,marmoset,orangutan,panda, antisense antisense A549@0.0058625,AG04450@0.0023915,BJ@0.003125,GM12878@0.037075,H1HESC@0.02864,HELAS3@0.001635,HEPG2@0.019847,HMEC@0,HSMM@0.005263,HUVEC@0,K562@0.0077225,MCF7@0.071074,NHEK@0.00287967,NHLF@0,SKNSHRA@0.0884665, 0 0 0 0 ENSG00000254718.1 ENST00000529171.1 chr14:60706845-60715483 3 559 8075 intronic 4.06 1 0,1,0 0 0,0,0 0 3.52198142414861 131.655 0 15.5891021671827 200.173 0 16.3686687306502 193.104 0 1 chimp,human,marmoset, antisense antisense A549@0.0058625,AG04450@0.0023915,BJ@0.003125,GM12878@0.037075,H1HESC@0.02864,HELAS3@0.001635,HEPG2@0.019847,HMEC@0,HSMM@0.005263,HUVEC@0,K562@0.0077225,MCF7@0.071074,NHEK@0.00287967,NHLF@0,SKNSHRA@0.0884665, 0 0 0 0 ENSG00000247287.1 ENST00000500036.1 chr14:61769749-61789536 2 4487 15298 intronic 0.95 0 0,1,0 0 0,0,0 6.61466458658346 25.4863380834096 39.663 7.93425451303766 36.2521898287358 44.882 13.5266324938712 35.1326970845862 40.192 1 1 chimp,human,macaque,marmoset,orangutan, lincRNA lincRNA A549@0.014266,AG04450@0,BJ@0,GM12878@0.373591,H1HESC@0.0062905,HELAS3@0,HEPG2@0,HMEC@0.023716,HSMM@0,HUVEC@0.207012,K562@0.0021885,MCF7@0.243569,NHEK@0.109594,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000250548.1 ENST00000508827.1 chr14:62023038-62037371 5 5098 9227 intergenic 1.44 0 1,1,1 0 0,0,0 5.22106708513142 3.1614826053972 22.186 12.0084346802668 6.71821827246125 30.118 12.7314633189486 7.26975181532459 30.679 1 1 chimp,human,macaque,marmoset,orangutan, lincRNA lincRNA A549@0.107855,AG04450@0.102465,BJ@0.0665655,GM12878@0.009383,H1HESC@0.0019395,HELAS3@0.867808,HEPG2@0.274429,HMEC@0.034503,HSMM@0.26173,HUVEC@0.070344,K562@0.0032045,MCF7@0.153525,NHEK@0.114586,NHLF@0.0303175,SKNSHRA@0.146141, 0 0 0 0 ENSG00000232774.2 ENST00000229465.5 chr14:62037256-62125389 5 1627 86498 intergenic 5.95 0 0,0,1 0 0,0,0 5.40872771972956 11.9952253231289 13.86 18.5666871542717 13.5348678582164 7.377 14.4714197910264 14.6009618719508 7.691 0 0 cat,chimp,cow,dog,elephant,guinea_pig,horse,human,macaque,marmoset,mouse,orangutan,panda,pig,rabbit,rat, lincRNA lincRNA A549@0.0477395,AG04450@0.106535,BJ@0.032042,GM12878@0.247045,H1HESC@0.0278215,HELAS3@3.12689,HEPG2@0.455632,HMEC@0.055197,HSMM@51.0525,HUVEC@0.114238,K562@0.00301,MCF7@0.066129,NHEK@0.0852757,NHLF@0.222407,SKNSHRA@0.281996, 80 2 0 0 ENSG00000179600.2 ENST00000539258.1 chr14:63779549-63785593 3 539 5501 intergenic 8.98 0 0,1,0 0 0,1,1 242.73840445269 3.27667696782403 164.63 298.645640074211 5.76531539720051 167.761 271.992578849722 3.54062897654972 156.715 0 0 chimp,cow,dog,elephant,guinea_pig,horse,human,macaque,marmoset,mouse,opossum,orangutan,panda,pig,rat, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000179600.2 ENST00000314140.1 chr14:63779642-63784563 3 387 4530 intergenic 1.58 0 0,0,0 0 0,1,1 330.242894056848 4.07174392935982 0 404.37984496124 6.55871964679912 312.553 368.423772609819 3.70154525386313 4.278 0 0 chimp,cow,dog,elephant,guinea_pig,horse,human,macaque,marmoset,mouse,opossum,orangutan,panda,pig,rabbit,rat, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000255002.1 ENST00000531609.1 chr14:65679611-65689065 4 1438 8010 intergenic 0.99 0 0,0,1 0 0,1,0 18.8734353268428 14.9383270911361 37.092 20.9248956884562 23.6129837702871 25.108 22.3198887343533 22.8960049937578 25.34 1 1 chimp,human,macaque,marmoset,orangutan, lincRNA lincRNA A549@0.0030105,AG04450@0.022313,BJ@0,GM12878@0.03469,H1HESC@0,HELAS3@0.004701,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0.0049175,NHEK@0,NHLF@0,SKNSHRA@0.0037305, 0 0 0 0 ENSG00000196553.8 ENST00000389594.3 chr14:66953072-66965270 10 1132 11048 intergenic 3.76 0 0,0,1 0 0,0,0 118.780918727915 10.2452932657495 0 328.870141342756 20.1333272990586 11.52 312.578621908127 20.2978819695873 15.789 0 0 cat,chimp,cow,elephant,guinea_pig,horse,human,macaque,marmoset,mouse,orangutan,panda,pig,rabbit,rat, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0.0046565,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000196553.8 ENST00000359454.6 chr14:66953089-66965271 10 1073 11091 intergenic 5.86 0 0,0,1 0 0,0,0 115.691519105312 11.1663510954828 0 404.629077353215 20.3442430799748 18.252 389.920782851817 20.6014786764043 22.878 0 0 chimp,cow,dog,elephant,guinea_pig,horse,human,macaque,marmoset,mouse,orangutan,panda,pig,rabbit,rat, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0.0046565,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000196553.8 ENST00000411796.2 chr14:66953109-66965270 11 1121 11020 intergenic 5.97 0 0,0,1 0 0,0,0 104.941123996432 11.8279491833031 0 351.041926851026 21.4770417422867 22.405 335.058876003568 21.6652450090744 24.407 0 0 cat,chimp,cow,dog,elephant,guinea_pig,horse,human,macaque,marmoset,mouse,opossum,orangutan,panda,pig,rabbit,rat, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0.0046565,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000196553.8 ENST00000432289.1 chr14:66953385-66965271 5 536 11342 intergenic 2.81 0 0,0,1 0 0,0,0 100.727611940299 15.9760183389173 13.631 335.505597014925 32.4903897019926 62.606 328.567164179104 32.5393228707459 53.382 0 0 cat,chimp,cow,dog,elephant,guinea_pig,horse,human,macaque,marmoset,mouse,orangutan,panda,pig,rabbit,rat, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0.0046565,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000196553.8 ENST00000450299.1 chr14:66958353-66965270 5 488 6421 intergenic 2.71 0 0,0,1 0 0,0,0 92.2151639344262 8.86388413019779 55.82 331.93237704918 17.7076779317863 94.035 326.504098360656 19.8070394019623 86.957 0 0 chimp,cow,dog,guinea_pig,horse,human,macaque,marmoset,mouse,orangutan,pig,rabbit,rat, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0.0046565,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000196553.8 ENST00000436570.1 chr14:66958814-66965268 5 481 5965 intergenic -8.25 0 0,0,1 0 0,0,0 45.5405405405405 9.54149203688181 45.673 226.091476091476 15.5788767812238 132.48 233.293139293139 19.1081307627829 103.009 0 0 cat,chimp,cow,dog,guinea_pig,horse,human,macaque,marmoset,mouse,orangutan,panda,pig,rabbit, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0.0046565,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000245466.1 ENST00000500016.1 chr14:71075515-71108015 3 2938 29558 intergenic 1.63 0 0,0,0 1 0,0,0 7.3213070115725 2.06154002300562 13.832 8.82437031994554 4.64060491237567 134.094 9.16575901974132 8.00267271127952 108.631 1 1 chimp,human,macaque,marmoset,orangutan, lincRNA lincRNA A549@0.012433,AG04450@0,BJ@0,GM12878@0.465983,H1HESC@0.202149,HELAS3@0.0015895,HEPG2@0.0091915,HMEC@0,HSMM@0.246859,HUVEC@0,K562@0.0007895,MCF7@0.124254,NHEK@0,NHLF@0.0138105,SKNSHRA@0.043399, 0 0 0 0 ENSG00000251393.1 ENST00000515412.1 chr14:73929129-73946655 4 2848 14672 exonic -4.66 0 0,1,0 0 0,0,0 12.5091292134831 19.6235687022901 30.861 21.7110252808989 25.1580561613959 61.633 22.2240168539326 26.7709242093784 62.732 1 1 chimp,human,macaque,marmoset,orangutan, lincRNA lincRNA A549@0.165015,AG04450@0.042198,BJ@0.0059985,GM12878@0.0235125,H1HESC@0.001042,HELAS3@0.184273,HEPG2@0.440813,HMEC@0.011486,HSMM@0.008481,HUVEC@0.0073465,K562@0.000814,MCF7@0.001442,NHEK@0.000895333,NHLF@0.0431565,SKNSHRA@0.270016, 0 0 0 0 ENSG00000224721.1 ENST00000455232.1 chr14:76041231-76045931 3 2156 2540 exonic 12.69 0 0,1,0 0 0,0,0 92.10853432282 0 36.463 119.076994434137 0 34.79 117.066790352505 1.81771653543307 37.047 0 0 cat,chimp,cow,elephant,horse,human,macaque,marmoset,orangutan, lincRNA processed_transcript A549@0.007005,AG04450@0,BJ@0,GM12878@0.013779,H1HESC@0.005449,HELAS3@0.006325,HEPG2@0.0255565,HMEC@0.003793,HSMM@0.0168185,HUVEC@0,K562@0,MCF7@0.0342205,NHEK@0.00915867,NHLF@0.0009035,SKNSHRA@0, 0 0 0 0 ENSG00000246548.1 ENST00000500215.1 chr14:77507407-77535846 4 2920 25513 intergenic 0.21 0 0,0,0 0 0,0,0 45.836301369863 33.9496727158703 462.644 49.225 39.1698349860855 474.166 46.7650684931507 40.775722180849 458.919 1 1 chimp,human,macaque,marmoset,orangutan, lincRNA lincRNA A549@0.0731225,AG04450@0.0593795,BJ@0.050406,GM12878@0.087933,H1HESC@0.0362575,HELAS3@0.0420875,HEPG2@0.025773,HMEC@0,HSMM@0.0293415,HUVEC@0.048465,K562@0.002747,MCF7@0.217226,NHEK@0.00541,NHLF@0.067509,SKNSHRA@0.0757335, 0 0 0 0 ENSG00000247694.1 ENST00000501656.1 chr14:81687562-81688799 2 1123 112 exonic 2.98 0 0,0,1 0 0,0,0 0 0 320.206 9.12377560106857 0 332.965 8.34817453250223 0 276.613 0 0 cat,chimp,elephant,human,orangutan,panda,pig,rabbit,rat, lincRNA lincRNA A549@0.58876,AG04450@0.400213,BJ@0.444416,GM12878@0.7709,H1HESC@1.01157,HELAS3@1.21701,HEPG2@0.639833,HMEC@1.11458,HSMM@0.573443,HUVEC@0.132706,K562@0.748638,MCF7@2.44963,NHEK@0.18989,NHLF@0.385647,SKNSHRA@0.737827, 0 0 0 0 ENSG00000233208.1 ENST00000442515.1 chr14:90921574-90925210 4 666 2964 intergenic 3.13 1 0,0,0 0 0,0,0 0 5.18556005398111 0 0 7.860661268556 11.316 0 8.29048582995951 11.442 0 0 chimp,cow,dog,elephant,horse,human,macaque,marmoset,orangutan,panda,pig, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0.0106645,HELAS3@0,HEPG2@0.0064945,HMEC@0,HSMM@0,HUVEC@0.020422,K562@0,MCF7@0.0049845,NHEK@0,NHLF@0,SKNSHRA@0.0126375, 0 0 0 0 ENSG00000233208.1 ENST00000419459.1 chr14:90921615-90925248 3 2023 1606 intergenic 3.13 1 0,0,0 0 0,0,0 7.5976272862086 0 0 11.5170538803757 0 11.316 12.1468116658428 0 11.442 0 0 chimp,cow,elephant,guinea_pig,horse,human,macaque,marmoset,orangutan,panda,pig, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0.0106645,HELAS3@0,HEPG2@0.0064945,HMEC@0,HSMM@0,HUVEC@0.020422,K562@0,MCF7@0.0049845,NHEK@0,NHLF@0,SKNSHRA@0.0126375, 0 0 0 0 ENSG00000233208.1 ENST00000444942.1 chr14:90921673-90925249 3 1373 2199 intergenic 3.13 1 0,0,0 0 0,0,0 0 6.98954070031833 0 7.16023306627822 6.12460209185994 11.316 7.18135469774217 6.69076853115052 11.442 0 0 chimp,cow,dog,elephant,horse,human,macaque,marmoset,orangutan, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0.0106645,HELAS3@0,HEPG2@0.0064945,HMEC@0,HSMM@0,HUVEC@0.020422,K562@0,MCF7@0.0049845,NHEK@0,NHLF@0,SKNSHRA@0.0126375, 0 0 0 0 ENSG00000175699.8 ENST00000444118.1 chr14:94463616-94473898 9 1928 8338 intergenic 17.30 1 0,1,0 0 0,1,0 0 0 0 14.3609958506224 1.19525065963061 0 16.0119294605809 1.34048932597745 0 0 0 cow,horse,human,marmoset,orangutan,panda, lincRNA processed_transcript A549@0,AG04450@0,BJ@0,GM12878@0.028542,H1HESC@0,HELAS3@0.013095,HEPG2@0.0269965,HMEC@0.003211,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000175699.8 ENST00000455802.1 chr14:94463620-94467569 5 422 3519 intergenic 3.52 0 0,1,0 0 0,1,0 0 0 0 24.5592417061611 1.18130150610969 0 24.8744075829384 1.52941176470588 0 0 0 cat,chimp,dog,horse,human,macaque,marmoset,orangutan,pig, lincRNA processed_transcript A549@0,AG04450@0,BJ@0,GM12878@0.028542,H1HESC@0,HELAS3@0.013095,HEPG2@0.0269965,HMEC@0.003211,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000175699.8 ENST00000359253.2 chr14:94463642-94475209 7 1268 10287 intergenic 44.01 1 0,1,1 0 0,1,0 0 1.13346942743268 0 28.7152996845426 1.46174783707592 0.248 31.3257097791798 1.60309128025663 0.251 0 0 elephant,guinea_pig,human,marmoset,orangutan,rabbit, lincRNA processed_transcript A549@0,AG04450@0,BJ@0,GM12878@0.028542,H1HESC@0,HELAS3@0.013095,HEPG2@0.0269965,HMEC@0.003211,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000175699.8 ENST00000314629.5 chr14:94463642-94478040 10 1711 12669 intergenic 43.61 1 0,1,0 0 0,1,0 0 0.920356776383298 0 16.6171829339568 1.81671797300497 0.248 18.4827586206897 1.94080037887758 0.251 0 0 chimp,cow,human,macaque,marmoset,orangutan, lincRNA processed_transcript A549@0,AG04450@0,BJ@0,GM12878@0.028542,H1HESC@0,HELAS3@0.013095,HEPG2@0.0269965,HMEC@0.003211,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000175699.8 ENST00000422540.1 chr14:94463642-94478040 11 1860 12518 intergenic 39.98 1 0,1,0 0 0,1,0 0 0.931458699472759 0 15.2860215053763 1.83863236938808 0.248 17.0021505376344 1.96421153538904 0.251 0 0 cow,guinea_pig,human,macaque,marmoset,orangutan, lincRNA processed_transcript A549@0,AG04450@0,BJ@0,GM12878@0.028542,H1HESC@0,HELAS3@0.013095,HEPG2@0.0269965,HMEC@0.003211,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000175699.8 ENST00000449472.1 chr14:94463686-94465806 3 474 1642 intergenic -3.15 0 0,1,0 0 0,1,0 0 0 0 4.43881856540084 0 1.24 4.47257383966245 0.715590742996346 1.255 0 0 chimp,cow,horse,human,macaque,marmoset,orangutan,pig, lincRNA processed_transcript A549@0,AG04450@0,BJ@0,GM12878@0.028542,H1HESC@0,HELAS3@0.013095,HEPG2@0.0269965,HMEC@0.003211,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000256357.1 ENST00000536735.1 chr14:94896970-94931067 3 565 33528 exonic 4.12 0 0,1,0 0 0,0,0 0 3.99835958005249 0 9.34336283185841 7.85090073968027 0 15.9982300884956 8.7195180147936 0 0 0 chimp,horse,human,macaque,marmoset,orangutan, antisense antisense A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0.0113325,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0.114872,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000235706.2 ENST00000439819.1 chr14:95624015-95646262 4 806 21435 intronic 4.13 1 1,1,1 1 0,0,0 0 0.401399580125962 61.2 2.28411910669975 3.70468859342197 220.273 2.68362282878412 4.23037088873338 217.579 0 0 chimp,human,macaque,marmoset,orangutan, lincRNA processed_transcript A549@1.06026,AG04450@0.20434,BJ@0.334925,GM12878@1.19063,H1HESC@1.3066,HELAS3@0.287236,HEPG2@0.812195,HMEC@0.435574,HSMM@0.172578,HUVEC@0.145822,K562@0.133814,MCF7@1.35363,NHEK@0.562684,NHLF@0.131095,SKNSHRA@2.12101, 0 0 0 0 ENSG00000235706.2 ENST00000435343.1 chr14:95624097-95646262 4 719 21440 intronic 4.13 1 1,1,1 1 0,0,0 0 0.401305970149254 61.2 0 3.70382462686567 216.148 0 4.22938432835821 212.997 0 0 chimp,human,macaque,marmoset,orangutan, lincRNA processed_transcript A549@1.06026,AG04450@0.20434,BJ@0.334925,GM12878@1.19063,H1HESC@1.3066,HELAS3@0.287236,HEPG2@0.812195,HMEC@0.435574,HSMM@0.172578,HUVEC@0.145822,K562@0.133814,MCF7@1.35363,NHEK@0.562684,NHLF@0.131095,SKNSHRA@2.12101, 0 0 0 0 ENSG00000235706.2 ENST00000439999.1 chr14:95643820-95646262 2 2321 119 intergenic 4.13 1 0,1,1 0 0,0,0 0 0 0 0 0 0 0 0 0 0 0 chimp,human,macaque, lincRNA processed_transcript A549@1.06026,AG04450@0.20434,BJ@0.334925,GM12878@1.19063,H1HESC@1.3066,HELAS3@0.287236,HEPG2@0.812195,HMEC@0.435574,HSMM@0.172578,HUVEC@0.145822,K562@0.133814,MCF7@1.35363,NHEK@0.562684,NHLF@0.131095,SKNSHRA@2.12101, 0 0 0 0 ENSG00000229645.4 ENST00000464767.1 chr14:95873606-95876427 1 2821 0 intergenic 6.71 1 1,1,1 0 0,0,0 24.6221198156682 0 0 10.2300602623183 0 0 14.417227933357 0 0 0 0 chimp,human,macaque,orangutan, lincRNA lincRNA A549@0.0341625,AG04450@1.79002,BJ@1.4971,GM12878@4.66521,H1HESC@0.0044185,HELAS3@0.501275,HEPG2@2.53709,HMEC@1.15295,HSMM@1.50421,HUVEC@1.48639,K562@0.053921,MCF7@0.111697,NHEK@0.371031,NHLF@6.53123,SKNSHRA@0.604959, 0 0 0 0 ENSG00000229645.4 ENST00000541579.1 chr14:95875407-95875976 1 569 0 intergenic 3.25 0 0,1,0 0 0,0,0 0 0 0 4.62214411247803 0 5.704 4.6572934973638 0 5.957 0 0 chimp,human,macaque,marmoset,orangutan,rabbit, lincRNA lincRNA A549@0.0341625,AG04450@1.79002,BJ@1.4971,GM12878@4.66521,H1HESC@0.0044185,HELAS3@0.501275,HEPG2@2.53709,HMEC@1.15295,HSMM@1.50421,HUVEC@1.48639,K562@0.053921,MCF7@0.111697,NHEK@0.371031,NHLF@6.53123,SKNSHRA@0.604959, 0 0 0 0 ENSG00000247092.1 ENST00000500370.1 chr14:95999256-96001209 2 1321 630 intergenic 5.60 0 1,1,1 0 0,0,0 0 122.826984126984 65.723 8.1998485995458 124.911111111111 156.856 5.63588190764572 153.303174603175 183.531 1 1 chimp,human,macaque,marmoset,orangutan, lincRNA lincRNA A549@3.02746,AG04450@1.54666,BJ@0.981731,GM12878@17.4192,H1HESC@4.75551,HELAS3@7.6814,HEPG2@8.75032,HMEC@2.55042,HSMM@0.825832,HUVEC@2.20194,K562@7.15493,MCF7@6.16133,NHEK@1.00071,NHLF@1.14745,SKNSHRA@1.56376, 0 0 0 0 ENSG00000187621.9 ENST00000357168.2 chr14:96116835-96137897 9 1930 19116 intergenic 4.01 0 0,1,0 0 0,1,0 1.01968911917098 6.38695333751831 0 0 3.84018623142917 0 0.629533678756477 4.3103159656832 0 1 1 chimp,human,macaque,marmoset,orangutan, processed_transcript processed_transcript A549@0.0075175,AG04450@0.002585,BJ@0,GM12878@0.02261,H1HESC@0.355473,HELAS3@0.003687,HEPG2@0.004245,HMEC@0,HSMM@0,HUVEC@0.0029315,K562@0.0068425,MCF7@0.0170825,NHEK@0.0297987,NHLF@0,SKNSHRA@0.0324775, 0 0 0 0 ENSG00000187621.9 ENST00000460130.1 chr14:96116838-96120984 4 907 3233 intergenic 4.01 0 0,1,1 0 0,1,0 0 0 0 0 0 0 0 0 0 0 1 chimp,human, processed_transcript processed_transcript A549@0.0075175,AG04450@0.002585,BJ@0,GM12878@0.02261,H1HESC@0.355473,HELAS3@0.003687,HEPG2@0.004245,HMEC@0,HSMM@0,HUVEC@0.0029315,K562@0.0068425,MCF7@0.0170825,NHEK@0.0297987,NHLF@0,SKNSHRA@0.0324775, 9 6 0 0 ENSG00000187621.9 ENST00000483087.1 chr14:96117515-96138187 8 2186 18472 intergenic 4.01 1 0,0,0 0 0,1,0 0.900274473924977 6.60962537895193 0 0 3.97406886097878 0 0.555809698078683 4.46058899956691 0 1 1 chimp,human,macaque,marmoset,orangutan, processed_transcript processed_transcript A549@0.0075175,AG04450@0.002585,BJ@0,GM12878@0.02261,H1HESC@0.355473,HELAS3@0.003687,HEPG2@0.004245,HMEC@0,HSMM@0,HUVEC@0.0029315,K562@0.0068425,MCF7@0.0170825,NHEK@0.0297987,NHLF@0,SKNSHRA@0.0324775, 0 0 0 0 ENSG00000187621.9 ENST00000459662.1 chr14:96117515-96139789 8 3299 18961 intergenic 4.01 1 0,0,0 0 0,1,0 0.596544407396181 6.43916460102315 0 0 3.8715785032435 0 0.368293422249166 4.34555139496862 0 1 1 chimp,human,macaque,marmoset,orangutan, processed_transcript processed_transcript A549@0.0075175,AG04450@0.002585,BJ@0,GM12878@0.02261,H1HESC@0.355473,HELAS3@0.003687,HEPG2@0.004245,HMEC@0,HSMM@0,HUVEC@0.0029315,K562@0.0068425,MCF7@0.0170825,NHEK@0.0297987,NHLF@0,SKNSHRA@0.0324775, 0 0 0 0 ENSG00000187621.9 ENST00000484207.1 chr14:96129593-96138187 5 3775 4811 intergenic 4.00 1 0,0,0 0 0,1,0 0.521324503311258 6.81770941592185 0 0 6.97152359176886 0 0.321854304635762 8.37351901891499 0 0 1 chimp,human, processed_transcript retained_intron A549@0.0075175,AG04450@0.002585,BJ@0,GM12878@0.02261,H1HESC@0.355473,HELAS3@0.003687,HEPG2@0.004245,HMEC@0,HSMM@0,HUVEC@0.0029315,K562@0.0068425,MCF7@0.0170825,NHEK@0.0297987,NHLF@0,SKNSHRA@0.0324775, 0 0 0 0 ENSG00000187621.9 ENST00000467865.1 chr14:96129593-96139789 5 3658 6530 intergenic 3.08 1 0,0,0 0 0,1,0 0.537998906506288 5.02297090352221 0 0 5.13629402756508 0 0.332148715144888 6.16921898928025 0 0 1 chimp,human,orangutan, processed_transcript processed_transcript A549@0.0075175,AG04450@0.002585,BJ@0,GM12878@0.02261,H1HESC@0.355473,HELAS3@0.003687,HEPG2@0.004245,HMEC@0,HSMM@0,HUVEC@0.0029315,K562@0.0068425,MCF7@0.0170825,NHEK@0.0297987,NHLF@0,SKNSHRA@0.0324775, 0 0 0 0 ENSG00000187621.9 ENST00000352367.6 chr14:96129593-96146170 6 3392 13175 intergenic 3.93 1 0,0,1 0 0,1,0 0.580188679245283 2.48956356736243 0 0 6.10747628083492 0 0.358195754716981 5.91370018975332 0 0 1 chimp,human, processed_transcript processed_transcript A549@0.0075175,AG04450@0.002585,BJ@0,GM12878@0.02261,H1HESC@0.355473,HELAS3@0.003687,HEPG2@0.004245,HMEC@0,HSMM@0,HUVEC@0.0029315,K562@0.0068425,MCF7@0.0170825,NHEK@0.0297987,NHLF@0,SKNSHRA@0.0324775, 0 0 0 0 ENSG00000187621.9 ENST00000497248.1 chr14:96129593-96146170 4 4228 12343 intergenic 3.93 1 0,0,1 0 0,1,0 0 2.84339301628453 0 0 6.51916065786276 0 0 6.43044640687029 0 0 1 chimp,human, processed_transcript retained_intron A549@0.0075175,AG04450@0.002585,BJ@0,GM12878@0.02261,H1HESC@0.355473,HELAS3@0.003687,HEPG2@0.004245,HMEC@0,HSMM@0,HUVEC@0.0029315,K562@0.0068425,MCF7@0.0170825,NHEK@0.0297987,NHLF@0,SKNSHRA@0.0324775, 0 0 0 0 ENSG00000187621.9 ENST00000486671.1 chr14:96131199-96136751 2 2502 3048 intergenic 3.93 0 0,0,0 0 0,1,0 9.56994404476419 0 0 11.2565947242206 0 0 14.1994404476419 0 0 0 1 chimp,human,macaque,marmoset, processed_transcript processed_transcript A549@0.0075175,AG04450@0.002585,BJ@0,GM12878@0.02261,H1HESC@0.355473,HELAS3@0.003687,HEPG2@0.004245,HMEC@0,HSMM@0,HUVEC@0.0029315,K562@0.0068425,MCF7@0.0170825,NHEK@0.0297987,NHLF@0,SKNSHRA@0.0324775, 0 0 0 0 ENSG00000187621.9 ENST00000465501.1 chr14:96135821-96144437 4 2074 6536 intergenic 2.42 0 0,0,0 0 0,1,0 0.948891031822565 5.01835985312117 0 1.63886210221794 11.7911566707466 0 2.24590163934426 11.3938188494492 0 0 1 chimp,human,macaque, processed_transcript processed_transcript A549@0.0075175,AG04450@0.002585,BJ@0,GM12878@0.02261,H1HESC@0.355473,HELAS3@0.003687,HEPG2@0.004245,HMEC@0,HSMM@0,HUVEC@0.0029315,K562@0.0068425,MCF7@0.0170825,NHEK@0.0297987,NHLF@0,SKNSHRA@0.0324775, 0 0 0 0 ENSG00000187621.9 ENST00000495696.1 chr14:96136779-96143473 3 786 5904 intergenic 4.72 1 0,1,0 0 0,1,0 2.50381679389313 0 32.8 0 7.3724593495935 33.54 1.54580152671756 5.79014227642277 40.285 0 1 chimp,human,macaque, processed_transcript processed_transcript A549@0.0075175,AG04450@0.002585,BJ@0,GM12878@0.02261,H1HESC@0.355473,HELAS3@0.003687,HEPG2@0.004245,HMEC@0,HSMM@0,HUVEC@0.0029315,K562@0.0068425,MCF7@0.0170825,NHEK@0.0297987,NHLF@0,SKNSHRA@0.0324775, 0 0 0 0 ENSG00000250366.1 ENST00000504119.1 chr14:96342729-96391899 2 2928 46240 intergenic 6.40 0 0,1,0 1 0,0,0 44.6700819672131 4.59826989619377 37.154 68.2988387978142 8.72722750865052 81.794 76.8879781420765 8.66615484429066 79.854 1 1 chimp,human,macaque,marmoset,orangutan, lincRNA lincRNA A549@0,AG04450@0,BJ@0.002478,GM12878@0.000998,H1HESC@4.69853,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0.000686,NHEK@0,NHLF@0,SKNSHRA@0.001867, 0 0 0 0 ENSG00000250366.1 ENST00000503525.1 chr14:96343153-96391899 2 3142 45602 intergenic 6.40 0 0,1,0 1 0,0,0 41.6276257161044 4.66260251743345 37.154 97.4630808402291 5.57738695671242 123.867 97.7937619350732 6.23045041884128 113.8 1 1 chimp,human,macaque,marmoset,orangutan, lincRNA lincRNA A549@0,AG04450@0,BJ@0.002478,GM12878@0.000998,H1HESC@4.69853,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0.000686,NHEK@0,NHLF@0,SKNSHRA@0.001867, 0 0 0 0 ENSG00000246084.1 ENST00000499910.1 chr14:97925207-97930493 3 1109 4173 intergenic 1.19 0 0,0,0 0 0,0,0 19.9936880072137 13.1437814521927 136.902 28.965734896303 13.7431104720824 171.929 36.3697024346258 15.9101365923796 174.664 0 0 chimp,horse,human,macaque,marmoset, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@1.35118,H1HESC@0.144593,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000246223.3 ENST00000499006.1 chr14:98391975-98444461 3 1427 51055 intergenic -2.83 0 0,1,1 1 0,0,0 0 22.9468612280874 105.576 1.42957252978276 22.6653412985996 125.533 6.80868955851437 28.39038292038 499.819 1 1 chimp,human,macaque,marmoset,orangutan, lincRNA lincRNA A549@0,AG04450@0.002853,BJ@0,GM12878@0.0037665,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0.018936,HSMM@0.001439,HUVEC@0,K562@0.001235,MCF7@0,NHEK@1.51842,NHLF@0.006261,SKNSHRA@0.0010465, 0 0 0 0 ENSG00000246223.3 ENST00000502187.1 chr14:98424267-98444447 4 2451 17723 intergenic 4.53 0 0,1,1 1 0,0,0 0 17.0901088980421 105.576 0 24.6543474581053 127.573 2.54018767849857 31.0481295491734 154.658 1 1 chimp,human,macaque,marmoset,orangutan, lincRNA lincRNA A549@0,AG04450@0.002853,BJ@0,GM12878@0.0037665,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0.018936,HSMM@0.001439,HUVEC@0,K562@0.001235,MCF7@0,NHEK@1.51842,NHLF@0.006261,SKNSHRA@0.0010465, 0 0 0 0 ENSG00000246223.3 ENST00000512901.1 chr14:98424397-98444445 3 2165 17879 intergenic -1.65 0 0,1,1 1 0,0,0 0 16.940992225516 105.576 0 24.4392303820124 127.573 2.87575057736721 30.7772246769954 154.658 0 0 chimp,horse,human,macaque,marmoset,orangutan, lincRNA lincRNA A549@0,AG04450@0.002853,BJ@0,GM12878@0.0037665,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0.018936,HSMM@0.001439,HUVEC@0,K562@0.001235,MCF7@0,NHEK@1.51842,NHLF@0.006261,SKNSHRA@0.0010465, 0 0 0 0 ENSG00000237342.1 ENST00000421617.1 chr14:99311233-99311934 3 476 221 intergenic 4.92 0 0,0,0 0 0,0,0 94.7899159663866 280.723981900452 0 88.5966386554622 390.018099547511 4.32 86.5357142857143 375.986425339367 4.408 0 0 chimp,horse,human,macaque,marmoset,mouse,orangutan,panda, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000229402.1 ENST00000423922.1 chr14:99624753-99626006 2 559 692 intergenic 6.36 0 0,0,0 0 0,0,0 0 0 0 0 0 0 0 0 0 0 0 chimp,human,macaque,marmoset,orangutan, antisense antisense A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000235785.1 ENST00000429450.1 chr14:99729285-99731072 3 561 1222 intronic -4.20 0 0,0,0 0 0,0,0 53.541889483066 8.65302782324059 141.672 49.8627450980392 90.2986906710311 85.136 79.0249554367201 96.3829787234043 489.638 0 0 chimp,cow,dog,horse,human,macaque,marmoset,orangutan, antisense antisense A549@0,AG04450@0,BJ@0.0114755,GM12878@0.037851,H1HESC@0,HELAS3@0.0188225,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000247970.1 ENST00000502101.1 chr14:100070893-100092074 2 1034 20145 intergenic 0.58 0 1,1,1 0 0,0,0 21.6257253384913 6.32171754777861 78.51 33.5222437137331 6.32633407793497 336.21 25.1382978723404 7.57483246463142 359.705 0 0 cat,chimp,cow,dog,elephant,horse,human,macaque,marmoset,orangutan,panda,pig, lincRNA lincRNA A549@0.055164,AG04450@0.0809035,BJ@0.0165535,GM12878@0.1184,H1HESC@0.0328685,HELAS3@0,HEPG2@0.028113,HMEC@0.003952,HSMM@0.0625245,HUVEC@0.205813,K562@0.049997,MCF7@0.051475,NHEK@0.0916337,NHLF@0.0675925,SKNSHRA@0.415241, 0 0 0 0 ENSG00000214548.7 ENST00000520714.1 chr14:101292455-101311828 7 1344 18017 exonic 4.82 0 1,1,1 1 0,0,0 106.813244047619 41.3592162957207 110.608 101.862351190476 43.1831048454238 172.745 105.784226190476 45.9235166786923 171.245 0 0 cat,chimp,cow,dog,elephant,human,macaque,marmoset,mouse,panda,pig,rat, processed_transcript non_coding A549@11.8286,AG04450@81.1446,BJ@66.588,GM12878@0.914798,H1HESC@0.0986545,HELAS3@0.007341,HEPG2@0.0188695,HMEC@9.89739,HSMM@11.8049,HUVEC@138.447,K562@0.0085915,MCF7@0.053532,NHEK@1.57463,NHLF@25.4947,SKNSHRA@0.052483, 0 0 0 0 ENSG00000214548.7 ENST00000523671.1 chr14:101292455-101313375 6 4077 16833 exonic 7.43 0 0,1,1 1 0,0,0 124.388275692911 36.2620447929662 110.608 128.92200147167 36.4787619556823 172.745 127.990188864361 39.0516841917662 171.245 0 0 chimp,elephant,human,macaque,orangutan, processed_transcript non_coding A549@11.8286,AG04450@81.1446,BJ@66.588,GM12878@0.914798,H1HESC@0.0986545,HELAS3@0.007341,HEPG2@0.0188695,HMEC@9.89739,HSMM@11.8049,HUVEC@138.447,K562@0.0085915,MCF7@0.053532,NHEK@1.57463,NHLF@25.4947,SKNSHRA@0.052483, 0 0 0 0 ENSG00000214548.7 ENST00000522771.1 chr14:101292456-101313634 7 4475 16691 exonic 7.43 0 0,1,1 1 0,0,0 113.214525139665 36.570547001378 111.104 117.303463687151 36.7891079024624 172.934 116.460111731844 39.3839194775628 171.413 0 0 chimp,elephant,human,macaque,marmoset,orangutan, processed_transcript non_coding A549@11.8286,AG04450@81.1446,BJ@66.588,GM12878@0.914798,H1HESC@0.0986545,HELAS3@0.007341,HEPG2@0.0188695,HMEC@9.89739,HSMM@11.8049,HUVEC@138.447,K562@0.0085915,MCF7@0.053532,NHEK@1.57463,NHLF@25.4947,SKNSHRA@0.052483, 0 0 0 0 ENSG00000214548.7 ENST00000424076.2 chr14:101292463-101313627 7 2649 18503 exonic 7.43 0 0,1,1 1 0,0,0 115.106455266138 43.6860509106631 114.576 119.203095507739 44.2065070529103 174.75 116.0302000755 46.8072744960277 173.078 0 0 chimp,dog,elephant,horse,human,macaque,marmoset,orangutan,panda,pig, processed_transcript non_coding A549@11.8286,AG04450@81.1446,BJ@66.588,GM12878@0.914798,H1HESC@0.0986545,HELAS3@0.007341,HEPG2@0.0188695,HMEC@9.89739,HSMM@11.8049,HUVEC@138.447,K562@0.0085915,MCF7@0.053532,NHEK@1.57463,NHLF@25.4947,SKNSHRA@0.052483, 0 0 0 0 ENSG00000214548.7 ENST00000452120.1 chr14:101292470-101299643 3 4464 2705 exonic 4.82 0 0,1,0 1 0,0,0 92.5418906810036 23.6998151571165 118.048 103.676523297491 56.3937153419593 179.524 109.721774193548 61.3012939001848 177.677 0 1 chimp,human,macaque, processed_transcript retained_intron A549@11.8286,AG04450@81.1446,BJ@66.588,GM12878@0.914798,H1HESC@0.0986545,HELAS3@0.007341,HEPG2@0.0188695,HMEC@9.89739,HSMM@11.8049,HUVEC@138.447,K562@0.0085915,MCF7@0.053532,NHEK@1.57463,NHLF@25.4947,SKNSHRA@0.052483, 0 0 0 0 ENSG00000214548.7 ENST00000455286.1 chr14:101293748-101295643 3 496 1395 intergenic 4.82 0 0,1,1 1 0,0,0 63.0745967741936 9.14695340501792 33.988 57.8629032258064 53.2602150537634 64.901 63.7358870967742 63.6293906810036 63.701 0 0 chimp,cow,dog,elephant,guinea_pig,horse,human,macaque,marmoset,mouse,panda,rat, processed_transcript non_coding A549@11.8286,AG04450@81.1446,BJ@66.588,GM12878@0.914798,H1HESC@0.0986545,HELAS3@0.007341,HEPG2@0.0188695,HMEC@9.89739,HSMM@11.8049,HUVEC@138.447,K562@0.0085915,MCF7@0.053532,NHEK@1.57463,NHLF@25.4947,SKNSHRA@0.052483, 0 0 0 0 ENSG00000214548.7 ENST00000452514.2 chr14:101295948-101311855 4 457 15444 exonic -6.30 0 0,1,1 0 0,0,0 137.702407002188 42.5992618492619 53.853 80.9474835886215 41.1041828541829 94.048 81.9846827133479 43.5996503496503 108.615 0 0 chimp,dog,elephant,horse,human,macaque,marmoset,orangutan,panda, processed_transcript non_coding A549@11.8286,AG04450@81.1446,BJ@66.588,GM12878@0.914798,H1HESC@0.0986545,HELAS3@0.007341,HEPG2@0.0188695,HMEC@9.89739,HSMM@11.8049,HUVEC@138.447,K562@0.0085915,MCF7@0.053532,NHEK@1.57463,NHLF@25.4947,SKNSHRA@0.052483, 0 0 0 0 ENSG00000214548.7 ENST00000521812.1 chr14:101298401-101302560 2 633 3524 exonic -8.91 0 0,1,1 0 0,0,0 116.663507109005 7.23183881952327 85.942 114.126382306477 16.8439273552781 61.936 143.254344391785 19.2534052213394 64.576 0 0 cat,chimp,cow,dog,elephant,horse,human,macaque,marmoset,mouse,orangutan,panda,rat, processed_transcript retained_intron A549@11.8286,AG04450@81.1446,BJ@66.588,GM12878@0.914798,H1HESC@0.0986545,HELAS3@0.007341,HEPG2@0.0188695,HMEC@9.89739,HSMM@11.8049,HUVEC@138.447,K562@0.0085915,MCF7@0.053532,NHEK@1.57463,NHLF@25.4947,SKNSHRA@0.052483, 0 0 0 0 ENSG00000214548.7 ENST00000455531.1 chr14:101299615-101313638 2 4865 9156 exonic 6.65 0 0,1,1 0 0,1,0 51.3516957862282 41.87374399301 78.744 58.2947584789311 31.5416120576671 58.218 56.9027749229188 32.0117955439056 78.885 0 0 chimp,dog,elephant,horse,human,macaque,marmoset,orangutan,panda, processed_transcript retained_intron A549@11.8286,AG04450@81.1446,BJ@66.588,GM12878@0.914798,H1HESC@0.0986545,HELAS3@0.007341,HEPG2@0.0188695,HMEC@9.89739,HSMM@11.8049,HUVEC@138.447,K562@0.0085915,MCF7@0.053532,NHEK@1.57463,NHLF@25.4947,SKNSHRA@0.052483, 0 0 0 0 ENSG00000214548.7 ENST00000520069.1 chr14:101302143-101311870 4 392 9329 exonic 6.65 0 0,0,1 1 0,0,0 0 41.0972237110087 5.94 3.99234693877551 31.3787115446457 28.478 4.02295918367347 31.8440347304105 29.664 1 1 chimp,human,macaque,marmoset,orangutan, processed_transcript non_coding A549@11.8286,AG04450@81.1446,BJ@66.588,GM12878@0.914798,H1HESC@0.0986545,HELAS3@0.007341,HEPG2@0.0188695,HMEC@9.89739,HSMM@11.8049,HUVEC@138.447,K562@0.0085915,MCF7@0.053532,NHEK@1.57463,NHLF@25.4947,SKNSHRA@0.052483, 0 0 0 0 ENSG00000214512.2 ENST00000398460.2 chr14:101323582-101327355 2 3379 392 exonic 2.65 0 0,1,0 0 0,0,0 5.7469665581533 106.885204081633 8.14 37.8978987866233 69.9234693877551 6.276 37.9405149452501 70.0561224489796 5.413 0 0 chimp,human,macaque,orangutan, antisense antisense A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0.0046205,MCF7@0.0269825,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000225746.2 ENST00000427085.1 chr14:101415315-101419089 5 605 3161 intergenic -2.59 0 0,0,0 0 0,0,0 0 3.62923125593167 0 0 1.52325213540019 0 0 2.43435621638722 0 0 0 chimp,dog,horse,human,macaque,marmoset,orangutan,panda, lincRNA lincRNA A549@1.66501,AG04450@27.6132,BJ@8.27985,GM12878@0.138379,H1HESC@0.003715,HELAS3@0.052176,HEPG2@0,HMEC@0.2723,HSMM@1.87419,HUVEC@15.7784,K562@0.127596,MCF7@0.0116425,NHEK@0.130113,NHLF@8.91705,SKNSHRA@0.003763, 0 0 0 0 ENSG00000225746.2 ENST00000434716.1 chr14:101415315-101422514 7 732 6455 intergenic -0.55 0 0,0,0 0 0,0,0 0 1.77722695584818 0 0 1.55445391169636 0 0 2.01239349341596 0 0 0 chimp,dog,horse,human,macaque,marmoset,orangutan, lincRNA lincRNA A549@1.66501,AG04450@27.6132,BJ@8.27985,GM12878@0.138379,H1HESC@0.003715,HELAS3@0.052176,HEPG2@0,HMEC@0.2723,HSMM@1.87419,HUVEC@15.7784,K562@0.127596,MCF7@0.0116425,NHEK@0.130113,NHLF@8.91705,SKNSHRA@0.003763, 0 0 0 0 ENSG00000225746.2 ENST00000414488.1 chr14:101415315-101424887 8 792 8766 intergenic -0.55 0 0,0,0 0 0,0,0 0 1.30869267624914 0 0 1.31918777093315 0 0 1.65913757700205 0 0 0 chimp,human,orangutan, lincRNA lincRNA A549@1.66501,AG04450@27.6132,BJ@8.27985,GM12878@0.138379,H1HESC@0.003715,HELAS3@0.052176,HEPG2@0,HMEC@0.2723,HSMM@1.87419,HUVEC@15.7784,K562@0.127596,MCF7@0.0116425,NHEK@0.130113,NHLF@8.91705,SKNSHRA@0.003763, 0 0 0 0 ENSG00000225746.2 ENST00000443252.2 chr14:101424599-101426510 2 452 1457 intergenic -2.48 0 0,1,1 0 0,0,0 0 0 0 0 0 0 445.557522123894 0 0 1 1 chimp,human,macaque,marmoset,orangutan, lincRNA lincRNA A549@1.66501,AG04450@27.6132,BJ@8.27985,GM12878@0.138379,H1HESC@0.003715,HELAS3@0.052176,HEPG2@0,HMEC@0.2723,HSMM@1.87419,HUVEC@15.7784,K562@0.127596,MCF7@0.0116425,NHEK@0.130113,NHLF@8.91705,SKNSHRA@0.003763, 2 44 0 0 ENSG00000241441.1 ENST00000423708.1 chr14:101427163-101432103 2 504 4434 intergenic -11.86 0 0,0,0 0 0,0,0 0 0 0 0 0 0 0 0 275.258 0 0 chimp,human,macaque,orangutan, lincRNA lincRNA A549@0.0487505,AG04450@1.06883,BJ@0.385012,GM12878@0.005248,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0.0070895,HUVEC@0.179557,K562@0.0044685,MCF7@0,NHEK@0,NHLF@0.019384,SKNSHRA@0, 0 0 0 0 ENSG00000232018.2 ENST00000442197.1 chr14:101427364-101433377 4 621 5386 intergenic -3.79 0 0,0,0 0 0,0,0 0 0 0 0 0 0 0 0 164.124 0 0 cat,chimp,cow,dog,horse,human,macaque,marmoset,orangutan,panda, lincRNA lincRNA A549@0.197341,AG04450@4.65381,BJ@1.51738,GM12878@0.0032255,H1HESC@0.009313,HELAS3@0,HEPG2@0.0069625,HMEC@1.132,HSMM@0.039189,HUVEC@2.02538,K562@0.0215315,MCF7@0.0097965,NHEK@0.02081,NHLF@1.02361,SKNSHRA@0.004449, 0 0 0 0 ENSG00000223403.1 ENST00000429368.1 chr14:101536248-101539271 2 2636 385 intergenic 4.66 0 0,0,1 0 0,0,0 69.9408194233687 0 0 56.654779969651 0 13.394 60.5652503793627 0 19.566 0 0 chimp,elephant,human,macaque,marmoset,orangutan,panda, lincRNA lincRNA A549@0.0561755,AG04450@0.610468,BJ@0.509215,GM12878@0.0009755,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0.057152,HSMM@0.106213,HUVEC@0.889117,K562@0.001862,MCF7@0.0034035,NHEK@0.011291,NHLF@0.346013,SKNSHRA@0.000944, 0 0 0 0 ENSG00000223403.1 ENST00000444846.1 chr14:101536824-101539271 2 2401 44 intergenic 2.16 0 0,1,1 0 0,0,0 76.7863390254061 0 0 60.6255726780508 0 3.78 64.8721366097459 0 3.892 0 0 chimp,human,macaque,marmoset,orangutan, lincRNA lincRNA A549@0.0561755,AG04450@0.610468,BJ@0.509215,GM12878@0.0009755,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0.057152,HSMM@0.106213,HUVEC@0.889117,K562@0.001862,MCF7@0.0034035,NHEK@0.011291,NHLF@0.346013,SKNSHRA@0.000944, 0 0 0 0 ENSG00000223403.1 ENST00000452349.1 chr14:101538144-101538895 2 383 366 intergenic 0 0 0,1,1 0 0,0,0 236.365535248042 135.770491803279 28.044 204.007832898172 115.475409836066 17.416 223.240208877285 113.79781420765 20.694 0 0 chimp,elephant,human,macaque,marmoset,orangutan, lincRNA lincRNA A549@0.0561755,AG04450@0.610468,BJ@0.509215,GM12878@0.0009755,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0.057152,HSMM@0.106213,HUVEC@0.889117,K562@0.001862,MCF7@0.0034035,NHEK@0.011291,NHLF@0.346013,SKNSHRA@0.000944, 0 0 0 0 ENSG00000230805.1 ENST00000448840.1 chr14:101540301-101544008 4 516 3185 intergenic 3.96 0 0,1,0 1 0,0,0 0 6.138147566719 0 0 8.72025117739403 0 0 8.74536891679749 0 0 0 chimp,human,macaque,marmoset,orangutan, lincRNA lincRNA A549@0,AG04450@0.035357,BJ@0.0235115,GM12878@0,H1HESC@0.094009,HELAS3@0.0043455,HEPG2@0,HMEC@0,HSMM@0.0087675,HUVEC@1.28935,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0.071482, 0 0 0 0 ENSG00000251533.1 ENST00000514902.1 chr14:103653562-103655365 3 1551 248 intergenic 0.77 0 0,0,1 0 0,0,0 0 0 0 0 0 0 0 0 0 0 1 chimp,human,orangutan, lincRNA lincRNA A549@0.349355,AG04450@0,BJ@0.024517,GM12878@0.042355,H1HESC@1.11641,HELAS3@0.0034155,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0.001699,NHLF@0.016225,SKNSHRA@0.01753, 0 0 0 0 ENSG00000246451.1 ENST00000498989.1 chr14:104146166-104150352 3 3054 1128 intronic 5.82 0 0,1,0 0 0,0,0 16.5703994760969 0 46.872 7.61951538965291 0 41.37 11.4027504911591 0 43.626 0 1 chimp,human,marmoset, lincRNA lincRNA A549@0.0253565,AG04450@0.0014665,BJ@0.0032215,GM12878@0.01638,H1HESC@0.0125935,HELAS3@0.131077,HEPG2@0.0486855,HMEC@0.001339,HSMM@0.002019,HUVEC@0.016363,K562@0.003126,MCF7@0.08219,NHEK@0.017552,NHLF@0.0038155,SKNSHRA@0.003304, 0 0 0 0 ENSG00000227729.1 ENST00000455348.1 chr14:104406763-104407776 2 719 292 intronic -1.98 0 0,0,0 0 0,0,0 136.968011126565 7.48972602739726 126.704 84.923504867872 6.78424657534247 450.284 136.184979137691 11.2602739726027 562.126 0 0 cat,chimp,cow,dog,elephant,guinea_pig,horse,human,macaque,marmoset,mouse,opossum,orangutan,panda,pig,platypus, antisense antisense A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000256050.1 ENST00000540171.1 chr14:105147483-105151268 2 1304 2479 intergenic 4.08 0 0,1,0 0 0,0,0 0 0 0 0 0 0 0 93.3037515127067 6.075 0 1 human,macaque,marmoset,orangutan, lincRNA lincRNA A549@0.438775,AG04450@0.18355,BJ@0.238884,GM12878@0.007656,H1HESC@0.004551,HELAS3@0.390441,HEPG2@0.162389,HMEC@0.147356,HSMM@0.150798,HUVEC@0.157876,K562@0.0041,MCF7@0.046427,NHEK@0.0507397,NHLF@0.147057,SKNSHRA@0.116842, 0 0 0 0 ENSG00000251602.1 ENST00000504332.1 chr14:105883918-105886076 2 1445 711 intergenic 3.73 0 0,1,0 1 0,0,0 0 0 0 3.00207612456747 0 132.081 9.44844290657439 0 208.221 0 1 chimp,human,orangutan, lincRNA lincRNA A549@0.491027,AG04450@0.861825,BJ@0.796761,GM12878@0.229904,H1HESC@1.09537,HELAS3@1.36455,HEPG2@1.62084,HMEC@0.243357,HSMM@0.702085,HUVEC@0.463243,K562@0.304957,MCF7@0.441056,NHEK@0.274694,NHLF@0.696147,SKNSHRA@2.27557, 0 0 0 0 ENSG00000227468.2 ENST00000428654.1 chr14:106064028-106066420 3 213 2175 intergenic 0 0 0,0,0 0 0,0,0 0 0 0 31.7699530516432 2.37793103448276 40.1 123.117370892019 3.13977011494253 67.713 0 0 cat,chimp,dog,elephant,guinea_pig,horse,human,macaque,marmoset,mouse,orangutan,panda,rabbit,rat, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000227468.2 ENST00000412518.1 chr14:106064224-106066376 2 355 1795 intergenic 0 0 0,0,0 0 0,0,0 0 0 0 29.8366197183099 0 38.86 249.064788732394 0 67.573 0 0 chimp,horse,human,macaque,marmoset,orangutan,rabbit,rat, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000227468.2 ENST00000427543.1 chr14:106064224-106066546 2 228 2092 intergenic 0.85 0 0,1,0 0 0,0,0 0 0 0 27.6622807017544 1.9225621414914 46.313 364.333333333333 2.33413001912046 79.483 0 0 cat,chimp,dog,guinea_pig,horse,human,macaque,marmoset,orangutan,rabbit, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000227468.2 ENST00000420153.1 chr14:106066241-106066546 2 164 139 intergenic 0 0 0,1,1 0 0,0,0 0 0 0 18.109756097561 0 46.313 14.3292682926829 55.2374100719424 79.483 0 0 chimp,human,macaque,marmoset,orangutan, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000254140.1 ENST00000390540.2 chr14:106067809-106071694 2 575 3308 intergenic 0 0 0,0,0 0 0,0,0 51.8226086956522 0 0 69.2834782608696 0 0 91.3234782608696 0.587666263603386 0 0 0 cat,chimp,dog,horse,human,macaque,marmoset,orangutan,panda,rabbit, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0.0109685,MCF7@0.46063,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000254140.1 ENST00000479229.1 chr14:106067994-106069282 2 495 791 intergenic 0 0 0,1,1 0 0,0,0 0 0 0 0 0 0 9.01010101010101 1.53603034134008 0.729 0 0 cat,dog,human,macaque,marmoset,orangutan,panda, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0.0109685,MCF7@0.46063,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000253364.1 ENST00000460164.1 chr14:106110833-106114892 2 522 3535 intergenic -0.09 0 0,0,0 0 0,0,0 0 0 0 15.6187739463602 0 0 53.3850574712644 0 78.645 0 0 cat,chimp,elephant,horse,human,macaque,marmoset,orangutan,panda, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000253364.1 ENST00000497397.1 chr14:106114261-106115394 3 545 584 intergenic 1.85 0 0,1,0 0 0,0,0 0 0 0 0 0 0 15.2073394495413 7.0736301369863 79.057 1 1 chimp,human,macaque,marmoset,orangutan, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000253701.1 ENST00000497872.2 chr14:106170301-106170939 2 357 279 intergenic 21.05 1 0,0,1 0 0,0,0 0 0 0 91.6078431372549 0 0 162.560224089636 0 0 0 0 cat,chimp,guinea_pig,horse,human,macaque,orangutan,panda,rat, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0.250123,HUVEC@0,K562@0,MCF7@0.016801,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000244620.1 ENST00000414005.1 chr14:106355942-106361967 2 239 5784 intergenic -3.59 0 0,1,0 0 0,1,0 0 0 0 0 0 0 0 6.75968188105118 139.479 1 1 chimp,human,macaque,marmoset,orangutan, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0.0111605, 0 0 0 0 ENSG00000244620.1 ENST00000418566.1 chr14:106360504-106362435 4 366 1559 intergenic -0.04 0 0,0,0 0 0,0,0 0 0 0 0 0 0 0 0 15.973 0 0 chimp,human,macaque,marmoset,orangutan, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0.0111605, 0 0 0 0 ENSG00000233988.1 ENST00000452053.1 chr14:106435819-106438358 2 1840 697 intergenic 7.94 0 0,1,0 0 0,0,0 0 0 0 45.529347826087 12.180774748924 0 45.6467391304348 12.4390243902439 0 0 0 cat,chimp,cow,dog,elephant,guinea_pig,horse,human,macaque,marmoset,mouse,orangutan,panda,rabbit,rat, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0.005919,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000229084.1 ENST00000458560.1 chr14:106744269-106744926 2 553 102 intergenic -5.77 0 0,0,0 0 0,0,0 0 0 0 0 0 0 20.3399638336347 0 266.752 0 0 chimp,human,macaque,marmoset,orangutan, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0.003632,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0.00819, 0 0 0 0 ENSG00000229084.1 ENST00000415154.1 chr14:106744315-106744966 2 569 80 intergenic -5.77 0 0,0,0 0 0,0,0 0 0 0 0 0 0 6.83304042179262 0 278.592 0 0 chimp,cow,human,macaque,marmoset,orangutan, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0.003632,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0.00819, 0 0 0 0 ENSG00000187156.4 ENST00000433371.1 chr14:106938445-106977000 4 1495 37054 intergenic 9.73 0 0,1,1 1 0,0,0 0 0 0 0 1.15145463377773 0 0 13.4709882873644 42.092 0 0 chimp,human,orangutan, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0.0014145,H1HESC@0.0042775,HELAS3@0.0226715,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@7.04771,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@4.933, 0 0 0 0 ENSG00000187156.4 ENST00000449670.1 chr14:106938455-106946494 3 482 7553 intergenic 3.48 0 0,1,0 1 0,0,0 0 0 0 0 0 0 24.8298755186722 17.1739706077055 42.092 0 0 chimp,human, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0.0014145,H1HESC@0.0042775,HELAS3@0.0226715,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@7.04771,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@4.933, 0 0 0 0 ENSG00000187156.4 ENST00000334298.3 chr14:106938474-106951462 3 1654 11330 intergenic 3.48 0 0,1,0 1 0,0,0 0 0 0 0 0.730803177405119 0 34.6154776299879 13.6329214474846 42.092 0 1 human,marmoset, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0.0014145,H1HESC@0.0042775,HELAS3@0.0226715,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@7.04771,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@4.933, 0 0 0 0 ENSG00000247765.1 ENST00000500487.1 chr15:21941147-21968151 2 2159 24843 intergenic 4.17 0 0,1,1 0 0,0,0 0 0 0 52.2334414080593 8.55379785050115 1.912 52.341361741547 12.3466972587852 4.681 0 0 human,macaque,orangutan,panda, lincRNA lincRNA A549@0.189064,AG04450@0.0125605,BJ@0.009408,GM12878@0.32402,H1HESC@0.0303255,HELAS3@0.0840525,HEPG2@0.068658,HMEC@0.066317,HSMM@0.107345,HUVEC@0.250296,K562@0.33108,MCF7@0.0746155,NHEK@0.0846643,NHLF@0.0026785,SKNSHRA@0.0152965, 0 0 0 0 ENSG00000187667.5 ENST00000400153.1 chr15:23187731-23208417 11 3635 17031 intergenic 6.34 0 0,1,0 0 0,1,0 0 2.53625741295285 0 26.1235213204952 4.11308789853796 0 199.358459422283 41.6377194527626 211.05 0 1 chimp,human, lincRNA lincRNA A549@1.50435,AG04450@0.424191,BJ@1.04504,GM12878@4.09674,H1HESC@0.043087,HELAS3@0.67377,HEPG2@1.54412,HMEC@0.288044,HSMM@0.230654,HUVEC@0.433211,K562@1.85854,MCF7@0.222009,NHEK@0.354394,NHLF@0.530333,SKNSHRA@0.180092, 0 0 0 0 ENSG00000187667.5 ENST00000340286.5 chr15:23190864-23207967 9 1951 15136 intergenic 6.34 0 0,0,1 1 0,1,0 0 2.8537922832981 0 48.6719630958483 4.62803911205074 0 290.646335212711 45.6826770613108 387.327 0 0 chimp,elephant,human,macaque,marmoset,orangutan,panda,rabbit, lincRNA lincRNA A549@1.50435,AG04450@0.424191,BJ@1.04504,GM12878@4.09674,H1HESC@0.043087,HELAS3@0.67377,HEPG2@1.54412,HMEC@0.288044,HSMM@0.230654,HUVEC@0.433211,K562@1.85854,MCF7@0.222009,NHEK@0.354394,NHLF@0.530333,SKNSHRA@0.180092, 0 0 0 0 ENSG00000224078.1 ENST00000441592.1 chr15:25418126-25427198 8 613 8445 intergenic 4.39 0 0,0,0 0 0,0,0 0 0 0 0 1.14529307282416 10.455 0 1.25612788632327 11.152 0 0 chimp,human,macaque,marmoset,orangutan, antisense non_coding A549@0.0029415,AG04450@0.0162045,BJ@0.0067255,GM12878@0.127858,H1HESC@0.04254,HELAS3@0.188141,HEPG2@0.25612,HMEC@0,HSMM@0.0835515,HUVEC@0.0305005,K562@0.0067985,MCF7@0,NHEK@0.0231957,NHLF@0,SKNSHRA@0.0154545, 0 0 0 0 ENSG00000224078.1 ENST00000447911.1 chr15:25425461-25427855 4 775 1613 intergenic 4.43 0 0,0,1 0 0,0,0 0 0 0 23.7561290322581 0 0 24.4916129032258 0 0 0 0 chimp,human,macaque,marmoset,orangutan,panda,rabbit, antisense non_coding A549@0.0029415,AG04450@0.0162045,BJ@0.0067255,GM12878@0.127858,H1HESC@0.04254,HELAS3@0.188141,HEPG2@0.25612,HMEC@0,HSMM@0.0835515,HUVEC@0.0305005,K562@0.0067985,MCF7@0,NHEK@0.0231957,NHLF@0,SKNSHRA@0.0154545, 0 0 0 0 ENSG00000224078.1 ENST00000424208.1 chr15:25426990-25467432 34 3132 37244 intergenic 8.86 0 0,0,0 0 0,0,0 0 0.654494683707443 0 3.80970625798212 2.97749973150038 0 4.06385696040868 22.2424551605628 0 0 0 chimp,human,macaque,marmoset,orangutan, antisense non_coding A549@0.0029415,AG04450@0.0162045,BJ@0.0067255,GM12878@0.127858,H1HESC@0.04254,HELAS3@0.188141,HEPG2@0.25612,HMEC@0,HSMM@0.0835515,HUVEC@0.0305005,K562@0.0067985,MCF7@0,NHEK@0.0231957,NHLF@0,SKNSHRA@0.0154545, 0 0 0 0 ENSG00000224078.1 ENST00000414175.1 chr15:25434450-25438636 5 605 3573 intergenic 3.10 0 0,1,0 0 0,0,0 0 2.86621886369997 0 19.7223140495868 3.22166246851385 0 20.1619834710744 4.45843828715365 0 0 0 cat,chimp,horse,human,macaque,marmoset,orangutan,panda,pig,rabbit, antisense non_coding A549@0.0029415,AG04450@0.0162045,BJ@0.0067255,GM12878@0.127858,H1HESC@0.04254,HELAS3@0.188141,HEPG2@0.25612,HMEC@0,HSMM@0.0835515,HUVEC@0.0305005,K562@0.0067985,MCF7@0,NHEK@0.0231957,NHLF@0,SKNSHRA@0.0154545, 0 0 0 0 ENSG00000224078.1 ENST00000456576.1 chr15:25438460-25442649 3 541 3644 intergenic 5.69 0 0,0,0 0 0,0,0 0 0 0 22.0554528650647 2.81558726673985 0 22.547134935305 4.40806805708013 0 0 0 cat,chimp,dog,human,macaque,marmoset,orangutan,panda,pig,rabbit, antisense non_coding A549@0.0029415,AG04450@0.0162045,BJ@0.0067255,GM12878@0.127858,H1HESC@0.04254,HELAS3@0.188141,HEPG2@0.25612,HMEC@0,HSMM@0.0835515,HUVEC@0.0305005,K562@0.0067985,MCF7@0,NHEK@0.0231957,NHLF@0,SKNSHRA@0.0154545, 0 0 0 0 ENSG00000224078.1 ENST00000424333.1 chr15:25442575-25459165 16 2081 14479 intergenic 8.86 0 0,0,0 0 0,0,0 0 0 0 0 2.9171904137026 0 1.80922633349351 36.5950687202155 5.271 0 0 chimp,human,macaque,marmoset,orangutan, antisense non_coding A549@0.0029415,AG04450@0.0162045,BJ@0.0067255,GM12878@0.127858,H1HESC@0.04254,HELAS3@0.188141,HEPG2@0.25612,HMEC@0,HSMM@0.0835515,HUVEC@0.0305005,K562@0.0067985,MCF7@0,NHEK@0.0231957,NHLF@0,SKNSHRA@0.0154545, 0 0 0 0 ENSG00000224078.1 ENST00000450809.1 chr15:25451227-25458676 7 670 6767 intergenic 7.68 0 0,0,0 0 0,0,0 0 0 0 0 2.21634402246195 0 0 17.5546032215162 161.568 0 0 chimp,human,macaque,marmoset,orangutan, antisense non_coding A549@0.0029415,AG04450@0.0162045,BJ@0.0067255,GM12878@0.127858,H1HESC@0.04254,HELAS3@0.188141,HEPG2@0.25612,HMEC@0,HSMM@0.0835515,HUVEC@0.0305005,K562@0.0067985,MCF7@0,NHEK@0.0231957,NHLF@0,SKNSHRA@0.0154545, 0 0 0 0 ENSG00000224078.1 ENST00000453082.1 chr15:25463499-25620623 39 6048 151000 exonic 8.31 0 0,1,1 0 0,0,0 1.64583333333333 19.2480132450331 0 1.81084656084656 17.2232582781457 0 3.12929894179894 27.9552119205298 0 0 0 chimp,human,macaque,marmoset,orangutan, antisense non_coding A549@0.0029415,AG04450@0.0162045,BJ@0.0067255,GM12878@0.127858,H1HESC@0.04254,HELAS3@0.188141,HEPG2@0.25612,HMEC@0,HSMM@0.0835515,HUVEC@0.0305005,K562@0.0067985,MCF7@0,NHEK@0.0231957,NHLF@0,SKNSHRA@0.0154545, 0 0 0 0 ENSG00000224078.1 ENST00000452731.1 chr15:25497372-25583343 9 1055 84900 exonic 4.72 0 0,0,1 0 0,0,0 128.710900473934 7.75042402826855 0 90.1260663507109 4.38128386336867 0 109.847393364929 12.7403297997644 0 0 0 chimp,horse,human,macaque,orangutan, antisense non_coding A549@0.0029415,AG04450@0.0162045,BJ@0.0067255,GM12878@0.127858,H1HESC@0.04254,HELAS3@0.188141,HEPG2@0.25612,HMEC@0,HSMM@0.0835515,HUVEC@0.0305005,K562@0.0067985,MCF7@0,NHEK@0.0231957,NHLF@0,SKNSHRA@0.0154545, 0 0 0 0 ENSG00000235731.1 ENST00000422117.1 chr15:25729978-25823938 4 2487 91467 intergenic 0.21 0 0,0,0 0 0,0,0 0 0.931581881990226 0 1.88661037394451 2.47377742792483 0 1.94129473260957 8.1071643324915 0 0 0 chimp,human,macaque,orangutan, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000235160.1 ENST00000451579.1 chr15:26640219-26691921 3 603 51095 intergenic -1.04 0 0,0,0 0 0,0,0 0 0.681964967217927 0 0 1.38357960661513 0 0.902155887230514 4.09701536353851 0 0 0 cat,chimp,dog,elephant,horse,human,macaque,orangutan,panda, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000235160.1 ENST00000450324.1 chr15:26678521-26691748 2 514 12711 intergenic -0.68 0 0,0,0 0 0,0,0 0 0 18.285 0 0.188026119109433 9.579 0 0.807646919990559 10.633 0 0 chimp,horse,human,macaque,marmoset,orangutan, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000235518.1 ENST00000451816.1 chr15:26902177-26903841 2 524 1138 intronic 1.07 0 0,0,1 0 0,0,0 0 0 0 0 0 0 0 0 0 0 0 cat,chimp,horse,human,macaque,marmoset,orangutan,panda, sense_intronic sense_intronic A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0.0273995,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0.054301, 0 0 0 0 ENSG00000228740.1 ENST00000439938.1 chr15:27402882-27406422 3 803 2733 intronic 2.31 0 0,0,0 0 0,0,0 0 0 0 0 0 0 0 5.61287961946579 0 0 0 chimp,dog,human,macaque,orangutan, antisense antisense A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000232394.1 ENST00000419100.1 chr15:28020767-28021944 2 416 759 intronic -0.30 0 0,0,1 0 0,0,0 0 0 0 0 0 0 0 0 0 0 0 chimp,human,marmoset,orangutan, antisense antisense A549@0,AG04450@0,BJ@0.038709,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0.0166645,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000248334.1 ENST00000512149.1 chr15:28982729-29003508 9 5237 15526 intergenic 2.61 0 0,0,0 0 0,0,0 0 0 0 2.96295589077716 0 0 178.510597670422 50.7813989437073 37.392 0 1 chimp,human,orangutan, lincRNA lincRNA A549@1.09457,AG04450@0.253934,BJ@0.83922,GM12878@2.50795,H1HESC@0.0586325,HELAS3@0.836123,HEPG2@1.10793,HMEC@0.190904,HSMM@0.136924,HUVEC@0.513462,K562@1.68424,MCF7@0.288131,NHEK@0.395348,NHLF@0.333971,SKNSHRA@0.467643, 0 0 0 0 ENSG00000248334.1 ENST00000515318.1 chr15:28983050-29003503 11 3642 16791 intergenic 5.47 0 0,1,0 1 0,0,0 0 0 0 4.2605711147721 0 0 222.861339923119 41.5943660294205 249.872 0 1 chimp,human, lincRNA lincRNA A549@1.09457,AG04450@0.253934,BJ@0.83922,GM12878@2.50795,H1HESC@0.0586325,HELAS3@0.836123,HEPG2@1.10793,HMEC@0.190904,HSMM@0.136924,HUVEC@0.513462,K562@1.68424,MCF7@0.288131,NHEK@0.395348,NHLF@0.333971,SKNSHRA@0.467643, 0 0 0 0 ENSG00000248334.1 ENST00000508764.1 chr15:28983340-29024285 12 2194 38729 intergenic 5.47 0 0,1,0 0 0,0,0 0 0 0 60.7862351868733 5.85914947455395 0 343.075660893346 39.9783624674017 426.442 1 1 chimp,human,macaque,marmoset,orangutan, lincRNA lincRNA A549@1.09457,AG04450@0.253934,BJ@0.83922,GM12878@2.50795,H1HESC@0.0586325,HELAS3@0.836123,HEPG2@1.10793,HMEC@0.190904,HSMM@0.136924,HUVEC@0.513462,K562@1.68424,MCF7@0.288131,NHEK@0.395348,NHLF@0.333971,SKNSHRA@0.467643, 0 0 0 0 ENSG00000256802.1 ENST00000536835.1 chr15:29967194-29971367 2 2523 1648 intergenic 4.20 0 0,1,1 1 0,0,0 0 0 0 0 0 0 33.3325406262386 2.94902912621359 0 0 1 chimp,human,macaque,marmoset, lincRNA lincRNA A549@2.559,AG04450@0.173661,BJ@0.082539,GM12878@0,H1HESC@0.33968,HELAS3@0.0066125,HEPG2@0.0643825,HMEC@0.034946,HSMM@0.148934,HUVEC@0.195308,K562@0.0188125,MCF7@0.094205,NHEK@0.016078,NHLF@0.046159,SKNSHRA@0.141153, 0 0 0 0 ENSG00000229389.1 ENST00000421447.1 chr15:30345145-30365267 4 689 19427 intergenic 2.49 0 0,1,0 0 0,0,0 0 0 0 42.3628447024673 0.567406187265146 9.342 107.641509433962 1.32398208678643 12.566 0 0 horse,human,macaque,marmoset,mouse,orangutan,panda,pig, antisense antisense A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000215302.3 ENST00000399971.3 chr15:30763457-30773643 6 1508 8668 intergenic 4.03 0 0,1,0 1 0,1,0 0 0 0 39.0702917771883 2.90216889709275 0 426.911140583554 44.0718735579142 304.973 0 0 chimp,elephant,guinea_pig,human,macaque,marmoset,orangutan, lincRNA lincRNA A549@1.75427,AG04450@0.751877,BJ@0.817786,GM12878@2.69837,H1HESC@0.269664,HELAS3@3.08403,HEPG2@1.79859,HMEC@0.42271,HSMM@0.256095,HUVEC@0.970782,K562@2.68895,MCF7@0.967518,NHEK@0.575512,NHLF@0.565424,SKNSHRA@0.598673, 89 2 0 0 ENSG00000247728.1 ENST00000501830.1 chr15:30857143-30917976 2 963 59868 intronic -0.83 0 0,1,0 1 0,0,0 0 0.851272800160353 0 0 11.2841417785795 69.103 0 48.2830059464154 76.435 0 0 chimp,cow,human,macaque,orangutan, lincRNA lincRNA A549@1.54177,AG04450@0.996802,BJ@0.878992,GM12878@5.04075,H1HESC@1.42578,HELAS3@2.65238,HEPG2@2.24948,HMEC@0.393867,HSMM@0.527804,HUVEC@0.962954,K562@2.88699,MCF7@0.681006,NHEK@0.546487,NHLF@0.476262,SKNSHRA@3.17326, 0 0 0 0 ENSG00000246638.1 ENST00000500533.1 chr15:31685046-31696932 4 1768 10112 intronic 0.16 0 0,0,1 0 0,0,0 0 0 0 0 2.4639042721519 0 0 6.64972310126582 0 0 0 chimp,elephant,human,marmoset, lincRNA lincRNA A549@0.030342,AG04450@0.009012,BJ@0.0054665,GM12878@0.0081265,H1HESC@0.0212615,HELAS3@0.002631,HEPG2@0.002696,HMEC@0.005127,HSMM@0.0078645,HUVEC@0.0133535,K562@0.0048955,MCF7@0,NHEK@0.00366467,NHLF@0.022151,SKNSHRA@0.0286995, 0 0 0 0 ENSG00000223509.2 ENST00000454486.2 chr15:32818481-32828671 6 1508 8672 intergenic 4.03 0 0,1,0 0 0,1,0 0 0 0 0 0 0 386.543103448276 45.2253228782288 293.776 0 0 chimp,elephant,guinea_pig,human,macaque,marmoset,orangutan, lincRNA lincRNA A549@1.9576,AG04450@1.07106,BJ@0.733109,GM12878@2.95629,H1HESC@0.315561,HELAS3@3.35306,HEPG2@1.96327,HMEC@0.411891,HSMM@0.227595,HUVEC@0.851167,K562@3.31448,MCF7@0.925663,NHEK@0.669931,NHLF@0.574878,SKNSHRA@0.667227, 89 2 0 0 ENSG00000244952.1 ENST00000500941.1 chr15:32898619-32907361 2 964 7776 intergenic -0.14 0 0,1,0 1 0,0,0 0 0 51.03 0 0 73.482 0 0.9375 74.959 0 0 chimp,cow,human,macaque,orangutan, lincRNA lincRNA A549@1.42022,AG04450@1.00517,BJ@0.749928,GM12878@4.16578,H1HESC@1.27998,HELAS3@2.35969,HEPG2@1.99797,HMEC@0.338355,HSMM@0.329769,HUVEC@0.921234,K562@2.77454,MCF7@0.724189,NHEK@0.493157,NHLF@0.341336,SKNSHRA@2.80584, 0 0 0 0 ENSG00000241818.1 ENST00000486285.1 chr15:32948285-32961293 3 429 12575 intronic 2.73 0 0,0,1 0 0,0,0 0 6.42520874751491 87.941 3.55477855477855 12.8501789264413 109.881 3.6013986013986 15.4654473161034 126.774 0 0 cat,chimp,cow,horse,human,macaque,marmoset,orangutan,panda,rabbit, antisense antisense A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000241818.1 ENST00000460684.1 chr15:32957903-32965266 4 457 6900 intronic 0.42 0 0,0,0 0 0,0,0 0 35.8311594202899 0 56.6301969365427 73.9346376811594 0 60.5207877461707 79.0569565217392 0 0 0 cat,chimp,dog,guinea_pig,human,macaque,marmoset,orangutan,pig, antisense antisense A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000250007.1 ENST00000503496.1 chr15:35047285-35105124 3 2724 55111 encompassing 4.16 0 0,0,0 0 0,0,0 9.59397944199706 34.5096986082633 216.269 13.9361233480176 35.8120701856254 326.926 14.1350954478708 38.6359347498685 293.421 1 1 chimp,human,macaque,marmoset,orangutan, lincRNA lincRNA A549@0.004947,AG04450@0.071572,BJ@0.010133,GM12878@0.002145,H1HESC@0.003043,HELAS3@0.104215,HEPG2@0.0416065,HMEC@0,HSMM@0.358146,HUVEC@0,K562@0,MCF7@0,NHEK@0.0139077,NHLF@0,SKNSHRA@0.003331, 0 0 0 0 ENSG00000248079.1 ENST00000501169.1 chr15:35838396-36151200 3 1472 311328 exonic 1.80 0 0,1,0 1 0,0,0 349.282608695652 61.83493293247 14.575 385.923233695652 63.1669878713125 22.326 382.3125 63.5627987203207 21.621 0 0 cat,chimp,cow,dog,elephant,guinea_pig,horse,human,macaque,marmoset,mouse,opossum,orangutan,panda,pig,rabbit, lincRNA lincRNA A549@0.106233,AG04450@0.421682,BJ@0.210815,GM12878@0.096928,H1HESC@0.136105,HELAS3@0.136508,HEPG2@0.0956015,HMEC@0.024984,HSMM@0.0653325,HUVEC@0.372872,K562@0.177183,MCF7@0.14871,NHEK@0.0952033,NHLF@0.226031,SKNSHRA@2.17476, 0 0 0 0 ENSG00000223518.2 ENST00000430593.2 chr15:37090798-37110707 4 1980 17923 intronic 3.36 0 0,1,0 0 0,1,0 47.769696969697 86.5037661105842 0 263.148484848485 109.863304134353 6.312 187.24898989899 133.85102940356 10.67 0 1 chimp,human,macaque,orangutan, lincRNA lincRNA A549@0.0099455,AG04450@0.00551,BJ@0.0114735,GM12878@0.011207,H1HESC@0,HELAS3@0.004208,HEPG2@0.0054995,HMEC@0,HSMM@0.0062225,HUVEC@0,K562@0.749049,MCF7@0.003109,NHEK@0,NHLF@0.175021,SKNSHRA@0.082336, 0 0 0 0 ENSG00000236914.2 ENST00000434223.2 chr15:38363831-38364884 2 962 89 intergenic 1.02 0 0,1,1 0 0,0,0 74.0135135135135 0 383.656 68.7962577962578 0 137.189 70.7848232848233 0 151.735 1 1 chimp,human,macaque,marmoset,orangutan, lincRNA lincRNA A549@0.279745,AG04450@0.452736,BJ@0.295585,GM12878@0.189016,H1HESC@0.335172,HELAS3@0.0562895,HEPG2@0.20248,HMEC@0.144416,HSMM@0.299201,HUVEC@0.424912,K562@0,MCF7@0.101148,NHEK@0.079455,NHLF@0.579849,SKNSHRA@0.157799, 0 0 0 0 ENSG00000246863.1 ENST00000499797.1 chr15:40213243-40217099 2 2727 1127 intergenic -0.94 0 0,1,0 0 0,0,0 3.45801246791346 0 30.516 2.08654198753209 0 63.666 3.10964429776311 0 45.638 1 1 chimp,human,macaque,marmoset,orangutan, lincRNA lincRNA A549@0.041782,AG04450@0.018631,BJ@0.045518,GM12878@0.0242925,H1HESC@0.120178,HELAS3@0.1425,HEPG2@0.069682,HMEC@0.006002,HSMM@0.0115535,HUVEC@0.0277205,K562@0.0231635,MCF7@0.0276985,NHEK@0.00664233,NHLF@0.0277625,SKNSHRA@0.0715555, 0 0 0 0 ENSG00000248508.1 ENST00000504245.1 chr15:40331512-40359491 3 2314 25661 intergenic -1.32 0 0,1,0 1 0,0,0 18.1434745030251 5.88180507384747 57.864 22.2869490060501 11.3280074821714 89.699 23.4178910976664 12.5101905615526 108.541 1 1 chimp,human,macaque,marmoset,orangutan, lincRNA lincRNA A549@0.514667,AG04450@0.305554,BJ@0.246119,GM12878@0.635591,H1HESC@0.561788,HELAS3@1.03462,HEPG2@0.744541,HMEC@0.130774,HSMM@0.471224,HUVEC@0.219886,K562@0.978882,MCF7@0.279845,NHEK@0.215142,NHLF@0.187568,SKNSHRA@1.44226, 0 0 0 0 ENSG00000245849.2 ENST00000533146.1 chr15:40978922-40987294 3 715 7653 exonic 8.15 0 0,1,0 1 0,0,0 0 3.86188422840716 0 5.2027972027972 1.41787534300274 11.512 5.26573426573427 1.80635045080361 11.728 0 1 chimp,human,orangutan, lincRNA processed_transcript A549@1.64449,AG04450@1.27019,BJ@1.80051,GM12878@3.0084,H1HESC@2.43473,HELAS3@8.08414,HEPG2@5.29258,HMEC@0.273506,HSMM@0.428265,HUVEC@1.98256,K562@5.53826,MCF7@2.41972,NHEK@1.29963,NHLF@0.588083,SKNSHRA@3.52156, 0 0 0 0 ENSG00000245849.2 ENST00000526635.1 chr15:40979921-40987296 3 416 6955 exonic 8.15 1 0,1,0 1 0,0,0 0 4.24946081955428 0 8.94230769230769 1.56017253774263 11.512 9.05048076923077 1.98763479511143 11.728 0 1 chimp,human,macaque,orangutan, lincRNA processed_transcript A549@1.64449,AG04450@1.27019,BJ@1.80051,GM12878@3.0084,H1HESC@2.43473,HELAS3@8.08414,HEPG2@5.29258,HMEC@0.273506,HSMM@0.428265,HUVEC@1.98256,K562@5.53826,MCF7@2.41972,NHEK@1.29963,NHLF@0.588083,SKNSHRA@3.52156, 0 0 0 0 ENSG00000245849.2 ENST00000499988.2 chr15:40985939-40987305 2 1149 215 exonic 8.15 0 1,1,1 1 0,0,0 0 0 0 3.23759791122715 0 11.512 3.27676240208877 0 11.728 0 1 chimp,human,marmoset,orangutan, lincRNA processed_transcript A549@1.64449,AG04450@1.27019,BJ@1.80051,GM12878@3.0084,H1HESC@2.43473,HELAS3@8.08414,HEPG2@5.29258,HMEC@0.273506,HSMM@0.428265,HUVEC@1.98256,K562@5.53826,MCF7@2.41972,NHEK@1.29963,NHLF@0.588083,SKNSHRA@3.52156, 0 0 0 0 ENSG00000251161.1 ENST00000503052.1 chr15:41199009-41201535 2 582 1942 intergenic 4.10 0 0,0,0 0 0,0,0 15.6340206185567 133.332131822863 306.34 60.8213058419244 192.649845520082 266.705 55.9587628865979 190.152935118435 231.554 0 0 chimp,elephant,horse,human,macaque,marmoset,orangutan, lincRNA lincRNA A549@0.313744,AG04450@0.180791,BJ@0.291728,GM12878@0.0788505,H1HESC@0.57391,HELAS3@0.206736,HEPG2@0.437244,HMEC@0.231374,HSMM@0.434655,HUVEC@0.31507,K562@0.045289,MCF7@1.85258,NHEK@0.629866,NHLF@0.287871,SKNSHRA@0.35779, 0 0 0 0 ENSG00000247556.1 ENST00000500949.1 chr15:41576203-41594168 4 4261 13698 intergenic 2.70 0 1,1,1 1 0,0,0 47.145505749824 1.05781865965834 0 69.9401548932176 1.25237260914002 6.555 72.0614879136353 1.61395824207914 9.372 1 1 chimp,human,macaque,marmoset,orangutan, lincRNA lincRNA A549@8.08943,AG04450@4.11324,BJ@3.70175,GM12878@14.0375,H1HESC@12.7085,HELAS3@11.6097,HEPG2@6.27862,HMEC@7.74544,HSMM@6.24554,HUVEC@3.6277,K562@14.6349,MCF7@3.79914,NHEK@7.93079,NHLF@4.22339,SKNSHRA@4.93715, 0 0 0 0 ENSG00000247556.1 ENST00000501665.1 chr15:41576230-41601901 5 1345 24318 exonic -0.06 0 1,1,1 1 0,0,0 21.307063197026 17.8870384077638 0 21.785873605948 32.8610905502097 12.435 44.0951672862454 34.6136195410807 15.756 0 0 chimp,guinea_pig,horse,human,macaque,marmoset,mouse,orangutan, lincRNA lincRNA A549@8.08943,AG04450@4.11324,BJ@3.70175,GM12878@14.0375,H1HESC@12.7085,HELAS3@11.6097,HEPG2@6.27862,HMEC@7.74544,HSMM@6.24554,HUVEC@3.6277,K562@14.6349,MCF7@3.79914,NHEK@7.93079,NHLF@4.22339,SKNSHRA@4.93715, 0 0 0 0 ENSG00000250379.1 ENST00000510176.1 chr15:42117297-42120134 3 582 2251 exonic -4.04 0 0,0,0 0 0,0,0 58.8762886597938 61.7956463793869 0 161.280068728522 110.212794313638 15.475 137.453608247423 103.914704575744 13.633 0 0 chimp,cow,elephant,guinea_pig,horse,human,macaque,marmoset,mouse,orangutan,panda,pig,rabbit,rat, antisense antisense A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0.0047535, 0 0 0 0 ENSG00000250379.1 ENST00000512295.1 chr15:42118224-42120053 2 511 1316 exonic 0.72 0 1,1,1 0 0,0,0 48.9706457925636 5.08206686930091 0 163.571428571429 16.226443768997 15.475 163.908023483366 17.3601823708207 13.633 0 0 chimp,cow,dog,elephant,guinea_pig,horse,human,macaque,marmoset,mouse,orangutan,panda,pig,rabbit,rat, antisense antisense A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0.0047535, 0 0 0 0 ENSG00000246740.1 ENST00000499478.1 chr15:42264961-42291247 4 2450 23830 exonic 5.60 1 0,1,0 0 0,0,0 11.7142857142857 18.5498111624003 71.4 23.3771428571429 29.1124632815779 146.689 26.0236734693878 28.804657994125 161.079 0 0 chimp,cow,horse,human,marmoset,orangutan, lincRNA lincRNA A549@0.016872,AG04450@0.00212,BJ@0.0102055,GM12878@0.054568,H1HESC@0.071896,HELAS3@0.0366175,HEPG2@0.006656,HMEC@0.01168,HSMM@0.000929,HUVEC@0.02274,K562@0.0380245,MCF7@0.013331,NHEK@0.022738,NHLF@0.0039755,SKNSHRA@0.014016, 0 0 0 0 ENSG00000246283.1 ENST00000500850.1 chr15:43029401-43034389 3 4044 940 exonic 2.79 0 0,1,1 0 0,0,0 45.6120178041543 25.3723404255319 146.039 47.2898120672601 32.4553191489362 248.642 43.9072700296736 34.1159574468085 230.119 1 1 chimp,human,macaque,marmoset,orangutan, lincRNA lincRNA A549@0.027441,AG04450@0.045042,BJ@0.0408135,GM12878@0.047338,H1HESC@0.053508,HELAS3@0.0718995,HEPG2@0.0658975,HMEC@0.001012,HSMM@0.008643,HUVEC@0.0397885,K562@0.110435,MCF7@0.0115385,NHEK@0.0159863,NHLF@0.019991,SKNSHRA@0.104161, 0 0 0 0 ENSG00000230288.3 ENST00000458245.3 chr15:45671395-45694520 3 1111 22010 intergenic -0.19 0 0,1,0 1 0,0,0 0 7.81830985915493 171.342 0 8.94079963652885 216.04 0 9.40645161290323 208.361 0 0 chimp,horse,human,macaque,orangutan, lincRNA processed_transcript A549@0.047783,AG04450@0.024197,BJ@0.0467165,GM12878@0.274841,H1HESC@0.079024,HELAS3@0.310339,HEPG2@0.232289,HMEC@0.03308,HSMM@0.0213135,HUVEC@0.0248095,K562@0.183812,MCF7@0.0636575,NHEK@0.068914,NHLF@0.0087185,SKNSHRA@0.0964485, 0 0 0 0 ENSG00000230288.3 ENST00000527933.1 chr15:45672698-45689453 3 478 16273 intergenic 0 0 0,0,0 0 0,0,0 0 8.5602531801143 0 0 9.31856449333251 6.575 0 9.74104344619922 6.8 0 0 chimp,human,macaque,marmoset,orangutan,rabbit, lincRNA processed_transcript A549@0.047783,AG04450@0.024197,BJ@0.0467165,GM12878@0.274841,H1HESC@0.079024,HELAS3@0.310339,HEPG2@0.232289,HMEC@0.03308,HSMM@0.0213135,HUVEC@0.0248095,K562@0.183812,MCF7@0.0636575,NHEK@0.068914,NHLF@0.0087185,SKNSHRA@0.0964485, 0 0 0 0 ENSG00000256900.1 ENST00000495658.1 chr15:45803351-45811856 5 911 7586 exonic 2.25 0 1,1,1 0 0,1,0 29.5104281009879 7.76377537569206 31.752 49.7628979143798 8.85104139203796 25.482 52.7266739846323 9.97627208014764 28.263 0 1 chimp,human,marmoset,orangutan, processed_transcript processed_transcript A549@0.013584,AG04450@0,BJ@0,GM12878@0.0108375,H1HESC@0,HELAS3@0.0144465,HEPG2@0.0208095,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0.0039195,NHEK@0,NHLF@0,SKNSHRA@0.002049, 0 0 0 0 ENSG00000244879.1 ENST00000499624.1 chr15:50647664-50650501 2 2282 553 intergenic 4.63 0 0,1,0 1 0,0,0 5.17440841367222 0 261.908 8.74452234881683 7.48643761301989 380.577 4.05740578439965 9.06871609403255 366.113 0 1 chimp,human,marmoset,orangutan, lincRNA lincRNA A549@4.36646,AG04450@1.2862,BJ@1.00588,GM12878@4.4874,H1HESC@2.82803,HELAS3@8.78627,HEPG2@5.23247,HMEC@1.10225,HSMM@1.24041,HUVEC@0.806426,K562@7.1801,MCF7@7.61943,NHEK@1.38252,NHLF@0.735828,SKNSHRA@3.31914, 0 0 0 0 ENSG00000244879.1 ENST00000499326.1 chr15:50647750-50648633 2 715 166 intergenic -0.21 0 1,1,1 1 0,0,0 0 0 274.044 5.79020979020979 0 398.748 7.01398601398601 0 373.487 0 0 chimp,cow,dog,elephant,horse,human,macaque,marmoset,orangutan,panda,pig, lincRNA lincRNA A549@4.36646,AG04450@1.2862,BJ@1.00588,GM12878@4.4874,H1HESC@2.82803,HELAS3@8.78627,HEPG2@5.23247,HMEC@1.10225,HSMM@1.24041,HUVEC@0.806426,K562@7.1801,MCF7@7.61943,NHEK@1.38252,NHLF@0.735828,SKNSHRA@3.31914, 0 0 0 0 ENSG00000247586.1 ENST00000500691.1 chr15:51132073-51200796 5 2393 66322 intergenic 3.87 0 0,1,0 1 0,0,0 0 6.38664394921745 68.796 0 9.21271976116522 94.61 0 20.2814752269232 94.399 1 1 chimp,human,macaque,marmoset,orangutan, lincRNA lincRNA A549@0.022725,AG04450@0.0057025,BJ@0.026365,GM12878@0.0507785,H1HESC@0.0470155,HELAS3@0.0352585,HEPG2@0.0418295,HMEC@0.003415,HSMM@0.001901,HUVEC@0.014142,K562@0.036998,MCF7@0.0161385,NHEK@0.001101,NHLF@0,SKNSHRA@0.0461525, 0 0 0 0 ENSG00000231111.2 ENST00000544821.1 chr15:52393790-52403225 2 511 8922 intronic -13.44 0 0,1,0 0 0,0,0 0 0 0 0 0.680228648285138 0 0 1.04920421430173 0 1 1 chimp,human,macaque,marmoset,orangutan, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0.021754,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000225973.2 ENST00000436697.2 chr15:55609382-55611243 2 864 995 exonic -1.95 0 1,1,1 1 0,0,0 0 0 10.516 81.5601851851852 0.480402010050251 12.869 77.9513888888889 16.3989949748744 17.37 1 1 chimp,human,macaque,marmoset,orangutan, lincRNA lincRNA A549@10.2104,AG04450@5.13682,BJ@4.87352,GM12878@4.36829,H1HESC@2.65996,HELAS3@12.2216,HEPG2@5.37213,HMEC@3.24828,HSMM@4.21692,HUVEC@3.30551,K562@11.0543,MCF7@4.9901,NHEK@2.27661,NHLF@5.08464,SKNSHRA@5.08727, 0 0 0 0 ENSG00000247982.1 ENST00000501726.1 chr15:57592563-57599959 3 2527 4865 intergenic 16.46 0 0,0,1 0 0,0,0 5.90027700831025 0 45.486 2.82113177681045 2.42466598150051 50.611 2.9616145627226 2.53566289825283 52.3 0 1 chimp,human,macaque,orangutan, lincRNA lincRNA A549@0.29381,AG04450@0.193242,BJ@0.208507,GM12878@6.98188,H1HESC@0.255842,HELAS3@0.191431,HEPG2@0.291259,HMEC@0.358448,HSMM@0.13686,HUVEC@1.03615,K562@0.20801,MCF7@0.080991,NHEK@0.215831,NHLF@0.0822475,SKNSHRA@0.522975, 0 0 0 0 ENSG00000247982.1 ENST00000500191.1 chr15:57595781-57599965 3 1909 2271 intergenic 16.46 0 1,1,1 0 0,0,0 8.92613933996857 0 0 3.08381351492928 2.57331571994716 0 3.26348873755893 2.69484808454425 0 0 1 human,macaque,orangutan, lincRNA lincRNA A549@0.29381,AG04450@0.193242,BJ@0.208507,GM12878@6.98188,H1HESC@0.255842,HELAS3@0.191431,HEPG2@0.291259,HMEC@0.358448,HSMM@0.13686,HUVEC@1.03615,K562@0.20801,MCF7@0.080991,NHEK@0.215831,NHLF@0.0822475,SKNSHRA@0.522975, 0 0 0 0 ENSG00000247982.1 ENST00000502027.1 chr15:57596923-57599956 3 2138 891 intergenic 5.24 0 0,0,1 0 0,0,0 6.47567820392891 0 0 2.06782039289055 5.28507295173962 0 2.17633302151543 5.51739618406285 0 0 1 chimp,human,macaque,orangutan, lincRNA lincRNA A549@0.29381,AG04450@0.193242,BJ@0.208507,GM12878@6.98188,H1HESC@0.255842,HELAS3@0.191431,HEPG2@0.291259,HMEC@0.358448,HSMM@0.13686,HUVEC@1.03615,K562@0.20801,MCF7@0.080991,NHEK@0.215831,NHLF@0.0822475,SKNSHRA@0.522975, 0 0 0 0 ENSG00000245975.1 ENST00000500929.1 chr15:59060273-59063173 2 1392 1506 intergenic -1.02 0 0,1,0 0 0,0,0 0 0 212.139 17.4317528735632 0 242.411 16.632183908046 0 213.373 0 1 chimp,human,macaque,orangutan, lincRNA lincRNA A549@0.744293,AG04450@0.311998,BJ@0.266056,GM12878@0.55423,H1HESC@0.385598,HELAS3@0.541596,HEPG2@0.311499,HMEC@1.15505,HSMM@0.52898,HUVEC@0.149923,K562@1.31337,MCF7@0.16686,NHEK@0.347577,NHLF@0.723253,SKNSHRA@0.618319, 0 0 0 0 ENSG00000225798.1 ENST00000452467.1 chr15:59182166-59186281 2 381 3732 exonic -3.76 0 0,0,1 0 0,0,0 358.860892388451 140.694801714898 129.352 249.766404199475 142.973740621651 112.826 221.230971128609 140.629153269025 330.852 0 0 cat,chimp,cow,dog,horse,human,macaque,marmoset,orangutan,panda,pig,rabbit,rat, antisense antisense A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0.0054165,HELAS3@0.054492,HEPG2@0.479639,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0.0053685,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000227161.1 ENST00000441746.1 chr15:59936497-59964501 2 95 27907 intronic 0 0 0,0,0 0 0,0,0 0 31.5772745189379 57.572 0 35.2147131544057 66.752 0 35.6974235854804 74.37 0 0 chimp,human,macaque,orangutan, processed_transcript processed_transcript A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000245534.1 ENST00000501579.1 chr15:60771380-60823166 6 1940 49836 exonic 4.84 0 1,1,1 1 0,0,0 42.7216494845361 98.3186050244803 0 49.9639175257732 93.3896179468658 14.866 51.4546391752577 98.4329601091581 14.833 1 1 chimp,human,macaque,marmoset,orangutan, lincRNA lincRNA A549@0.372336,AG04450@0.101161,BJ@0.059173,GM12878@0.44922,H1HESC@0.16898,HELAS3@0.299219,HEPG2@0.124026,HMEC@0.052603,HSMM@0.027407,HUVEC@0.023775,K562@0.424666,MCF7@0.11883,NHEK@0.044355,NHLF@0.052896,SKNSHRA@0.361574, 0 0 0 0 ENSG00000247333.1 ENST00000499528.1 chr15:64663186-64667537 3 1687 2660 exonic 0.65 0 0,1,0 0 0,0,0 16.5121517486663 0.932330827067669 22.227 2.87077652637819 4.76954887218045 21.848 5.53289863663308 5.11729323308271 30.48 0 1 chimp,human,macaque,orangutan, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0.0138435,H1HESC@0,HELAS3@0.005815,HEPG2@0.001614,HMEC@0,HSMM@0,HUVEC@0,K562@0.006394,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000250434.1 ENST00000511020.1 chr15:66952560-66974114 5 3046 18500 intergenic 6.32 0 0,1,1 0 0,0,0 47.8502954694682 7.69513513513513 0 38.4235062376888 5.41027027027027 29.377 38.7186474064347 6.38378378378378 38.095 0 0 chimp,horse,human, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0.016031,HELAS3@0.050865,HEPG2@0.073583,HMEC@0,HSMM@0,HUVEC@0.037882,K562@0.517884,MCF7@0.0466605,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000251428.1 ENST00000502544.1 chr15:67332912-67340583 3 1781 5886 intergenic 7.58 0 0,0,0 0 0,0,0 60.0084222346996 14.9337410805301 0 7.53453116226839 6.45599728168536 0 8.5985401459854 8.34046890927625 0 1 1 chimp,human,macaque,marmoset,orangutan, lincRNA lincRNA A549@0.0949255,AG04450@0.0187925,BJ@0.017459,GM12878@0.0016395,H1HESC@0.0033315,HELAS3@0.161841,HEPG2@0.065757,HMEC@0.006886,HSMM@0.004862,HUVEC@0.0229275,K562@0.002603,MCF7@0.0022795,NHEK@0.00662433,NHLF@0.0131,SKNSHRA@0.010757, 0 0 0 0 ENSG00000245719.1 ENST00000502156.1 chr15:68126648-68131217 3 1983 2582 intergenic 8.34 1 0,1,0 0 0,0,0 65.9727685325265 43.6219984508133 0 45.0695915279879 49.1979085979861 0 46.3605648008069 47.5956622773044 0 0 0 chimp,elephant,human,macaque,orangutan,pig, lincRNA lincRNA A549@0,AG04450@0,BJ@0.0024795,GM12878@0,H1HESC@0.0197715,HELAS3@0.0013365,HEPG2@0.0054095,HMEC@0.004123,HSMM@0,HUVEC@0,K562@0,MCF7@0.0020705,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000212766.3 ENST00000415504.1 chr15:69365266-69388147 5 2209 20664 intergenic 2.77 0 0,0,1 0 0,0,0 0 4.06407278358498 0 14.545043005885 5.7440960123887 8.153 8.49524671797193 6.12354819976771 8.804 0 0 cat,chimp,human,macaque,marmoset,orangutan, lincRNA processed_transcript A549@0.0515675,AG04450@0.048818,BJ@0.0146985,GM12878@0.007877,H1HESC@1.42509,HELAS3@0.170116,HEPG2@0.0381095,HMEC@0.001849,HSMM@0.063066,HUVEC@1.23438,K562@0.0022185,MCF7@0.0124525,NHEK@0.00119267,NHLF@0.005052,SKNSHRA@0.569205, 0 0 0 0 ENSG00000212766.3 ENST00000440444.1 chr15:69373202-69388147 4 2494 12445 intergenic 1.29 0 1,1,1 1 0,0,0 0 0 0 12.8829190056135 2.56633186018481 0 7.52445870088212 2.77501004419446 0 0 0 chimp,horse,human,macaque,marmoset,orangutan,pig, lincRNA processed_transcript A549@0.0515675,AG04450@0.048818,BJ@0.0146985,GM12878@0.007877,H1HESC@1.42509,HELAS3@0.170116,HEPG2@0.0381095,HMEC@0.001849,HSMM@0.063066,HUVEC@1.23438,K562@0.0022185,MCF7@0.0124525,NHEK@0.00119267,NHLF@0.005052,SKNSHRA@0.569205, 0 0 0 0 ENSG00000212766.3 ENST00000435479.1 chr15:69373210-69387595 4 868 13511 intergenic 1.10 0 0,1,1 1 0,0,0 0 0 0 27.926267281106 2.94782029457479 0 12.4608294930876 3.14447487232625 0 0 0 cat,chimp,cow,elephant,horse,human,macaque,marmoset,mouse,orangutan,pig,rat, lincRNA processed_transcript A549@0.0515675,AG04450@0.048818,BJ@0.0146985,GM12878@0.007877,H1HESC@1.42509,HELAS3@0.170116,HEPG2@0.0381095,HMEC@0.001849,HSMM@0.063066,HUVEC@1.23438,K562@0.0022185,MCF7@0.0124525,NHEK@0.00119267,NHLF@0.005052,SKNSHRA@0.569205, 0 0 0 0 ENSG00000245750.2 ENST00000498938.1 chr15:69854059-69863779 5 1700 8012 intergenic 3.84 0 1,1,1 0 0,0,0 25.8088235294118 16.4048926610085 256.379 6.52411764705882 26.1994508237644 268.414 11.0505882352941 23.9257363954069 255.635 1 1 chimp,human,macaque,marmoset,orangutan, lincRNA lincRNA A549@0.265047,AG04450@0.024723,BJ@0.011404,GM12878@0.0247635,H1HESC@0.0229295,HELAS3@0.108044,HEPG2@0.0349895,HMEC@0,HSMM@0.0606955,HUVEC@0,K562@0.06206,MCF7@0.0586615,NHEK@0,NHLF@0.00679,SKNSHRA@0.073114, 0 0 0 0 ENSG00000248804.1 ENST00000513467.1 chr15:70863298-70878945 2 3203 12442 intergenic -1.29 0 1,1,1 0 0,0,0 3.12925382453949 24.1169426137277 0 17.9319388073681 24.6478058190002 0 17.2769278801124 24.8371644430156 0 1 1 chimp,human,macaque,marmoset,orangutan, lincRNA lincRNA A549@0.102857,AG04450@0.0559385,BJ@0.130148,GM12878@0.001825,H1HESC@0.137471,HELAS3@0.116608,HEPG2@0.100523,HMEC@0,HSMM@0.013759,HUVEC@0.062787,K562@0.0185305,MCF7@0.031871,NHEK@0.0284673,NHLF@0.0857355,SKNSHRA@0.0125655, 0 0 0 0 ENSG00000248540.1 ENST00000514871.1 chr15:74418714-74421619 2 2564 339 intergenic 8.37 0 0,0,0 0 0,0,0 3.88533541341654 0 76.241 13.4227769110764 7.67256637168142 411.6 15.2652106084243 13.7551622418879 410.125 0 0 chimp,cow,horse,human,macaque,mouse, lincRNA lincRNA A549@0,AG04450@0.0025135,BJ@0,GM12878@0,H1HESC@0.0658415,HELAS3@0,HEPG2@0,HMEC@0.003191,HSMM@0.0035535,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0.270051, 0 0 0 0 ENSG00000247240.2 ENST00000499217.1 chr15:74753606-74773606 4 1292 18702 intergenic 3.78 0 1,1,1 1 0,0,0 0 0 51.712 3.81733746130031 4.0181264035932 45.941 6.57275541795666 6.7864934231633 48.817 1 1 chimp,human,macaque,marmoset,orangutan, lincRNA lincRNA A549@1.45844,AG04450@0.636556,BJ@1.41701,GM12878@7.15569,H1HESC@6.09388,HELAS3@4.6875,HEPG2@4.29323,HMEC@2.15723,HSMM@1.61922,HUVEC@1.82669,K562@6.42432,MCF7@4.72198,NHEK@2.23846,NHLF@1.02296,SKNSHRA@2.25134, 0 0 0 0 ENSG00000246877.1 ENST00000501931.1 chr15:76020011-76030964 3 3185 7764 exonic 2.29 0 0,1,0 1 0,0,0 9.60502354788069 0 0 19.0700156985871 12.3297269448738 0 46.2392464678179 24.5103039670273 177.029 1 1 chimp,human,macaque,marmoset,orangutan, lincRNA lincRNA A549@0.085441,AG04450@0.07924,BJ@0.0927655,GM12878@0.0973905,H1HESC@0.203488,HELAS3@0.0548995,HEPG2@0.083222,HMEC@0.019619,HSMM@0.032265,HUVEC@0.006578,K562@0.0397315,MCF7@0.17553,NHEK@0.0351473,NHLF@0.01154,SKNSHRA@0.270236, 0 0 0 0 ENSG00000244881.1 ENST00000500709.1 chr15:77713044-77776947 2 972 62929 exonic 0.49 0 0,0,1 0 0,0,0 6.92592592592593 27.0774841488026 65.61 272.564814814815 31.2717348122487 100.845 264.296296296296 33.4005466478094 103.41 0 0 cat,chimp,dog,guinea_pig,horse,human,macaque,marmoset,mouse,orangutan,pig,rat, lincRNA lincRNA A549@0.156066,AG04450@0.077311,BJ@0.0125955,GM12878@0.187457,H1HESC@0.029688,HELAS3@0.118455,HEPG2@0.061074,HMEC@0.008408,HSMM@0.0194685,HUVEC@0,K562@0.127694,MCF7@0.0126655,NHEK@0.0398837,NHLF@0.0020035,SKNSHRA@0.228003, 0 0 0 0 ENSG00000225273.2 ENST00000420908.2 chr15:82647354-82707815 5 1521 58932 intergenic 1.83 0 0,1,0 0 0,1,0 0 5.42854476345619 0 91.3346482577252 14.7858548835947 0 114.934911242604 29.842326749474 0 0 0 chimp,cow,dog,elephant,guinea_pig,human,macaque,marmoset,mouse,opossum,orangutan,rabbit, lincRNA lincRNA A549@1.74986,AG04450@0.983048,BJ@0.506715,GM12878@2.80025,H1HESC@2.45263,HELAS3@1.25887,HEPG2@1.51767,HMEC@0.158311,HSMM@0.44197,HUVEC@0.83405,K562@2.22242,MCF7@2.1034,NHEK@0.967248,NHLF@0.272736,SKNSHRA@1.52698, 0 0 0 0 ENSG00000228141.1 ENST00000440089.1 chr15:83379223-83382745 4 1358 2158 intergenic 7.89 1 0,0,1 0 0,0,0 0 0 14.65 43.0662739322533 1.76367006487488 32.267 45.8276877761414 2.00417052826691 39.922 0 0 chimp,cow,dog,elephant,horse,human,macaque,orangutan,panda,rabbit, lincRNA lincRNA A549@0.004776,AG04450@0.0018335,BJ@0.000942,GM12878@0.024922,H1HESC@0.0148505,HELAS3@0.001659,HEPG2@0.007349,HMEC@0.001594,HSMM@0.0008875,HUVEC@0.023095,K562@0.0137795,MCF7@0.025367,NHEK@0.00801633,NHLF@0,SKNSHRA@0.013562, 0 0 0 0 ENSG00000228141.1 ENST00000440479.1 chr15:83379225-83382778 2 2567 984 intergenic 7.89 1 0,0,1 0 0,0,0 0 0 14.65 23.0950525905727 8.51117886178862 27.243 24.5091546552396 9.52439024390244 34.786 0 0 chimp,human,macaque,orangutan, lincRNA lincRNA A549@0.004776,AG04450@0.0018335,BJ@0.000942,GM12878@0.024922,H1HESC@0.0148505,HELAS3@0.001659,HEPG2@0.007349,HMEC@0.001594,HSMM@0.0008875,HUVEC@0.023095,K562@0.0137795,MCF7@0.025367,NHEK@0.00801633,NHLF@0,SKNSHRA@0.013562, 0 0 0 0 ENSG00000250988.2 ENST00000544685.1 chr15:83419324-83425831 2 6244 261 intergenic -1.05 0 1,1,1 1 0,0,0 17.5432415118514 0 0 15.8403267136451 0 4.017 19.3150224215247 0 4.017 0 1 chimp,human,marmoset, lincRNA lincRNA A549@1.02885,AG04450@0.368336,BJ@0.24157,GM12878@1.46595,H1HESC@0.269375,HELAS3@1.94922,HEPG2@0.670664,HMEC@0.184094,HSMM@0.19767,HUVEC@0.206964,K562@2.09401,MCF7@1.01568,NHEK@0.315342,NHLF@0.183019,SKNSHRA@0.593622, 0 0 0 0 ENSG00000245763.1 ENST00000500334.1 chr15:83626882-83654620 2 1259 26477 intergenic 2.94 0 0,1,0 1 0,0,0 19.5965051628276 6.26275635457189 0 0 7.2471956792688 7.193 0 7.70865279299014 7.191 0 0 chimp,cow,elephant,horse,human,macaque,marmoset,orangutan,pig, lincRNA lincRNA A549@0.262946,AG04450@0.042252,BJ@0.069887,GM12878@0.227988,H1HESC@0.484687,HELAS3@0.287127,HEPG2@0.41755,HMEC@0.006494,HSMM@0.12206,HUVEC@0.017354,K562@0.034685,MCF7@0.938639,NHEK@0.150716,NHLF@0.180195,SKNSHRA@0.530876, 0 0 0 0 ENSG00000245208.1 ENST00000500581.1 chr15:83876655-83896949 3 1465 18825 intergenic -5.50 0 0,0,0 0 0,0,0 72.8600682593857 4.93253652058433 190.251 97.9092150170649 3.32982735723772 112.839 68.8143344709898 5.5797609561753 181.672 1 1 chimp,human,macaque,marmoset,orangutan, lincRNA lincRNA A549@0.007796,AG04450@0.013349,BJ@0.0082285,GM12878@0.003618,H1HESC@0.060989,HELAS3@0.015728,HEPG2@0.0055745,HMEC@0.005579,HSMM@0.012766,HUVEC@0.0069965,K562@0,MCF7@0.082967,NHEK@0,NHLF@0.007916,SKNSHRA@0.02757, 0 0 0 0 ENSG00000225151.4 ENST00000436127.2 chr15:84867600-84874024 6 2983 3431 intergenic 20.43 0 0,1,1 0 0,1,0 0 0 0 0 0 0 162.737512571237 200.097930632469 77.904 0 0 cat,cow,human,macaque,marmoset,orangutan,panda,pig, lincRNA processed_transcript A549@19.2892,AG04450@7.34371,BJ@5.83485,GM12878@15.7412,H1HESC@32.7601,HELAS3@18.8315,HEPG2@24.7435,HMEC@9.0323,HSMM@4.46079,HUVEC@8.48605,K562@10.105,MCF7@20.8582,NHEK@14.6642,NHLF@3.79914,SKNSHRA@21.4523, 0 0 0 0 ENSG00000225151.4 ENST00000400817.2 chr15:84868064-84898722 7 2538 28108 intergenic 21.54 0 0,1,0 0 0,1,0 0 0 0 0 0.252632702433471 0 192.048069345942 33.0496655756368 0 0 0 chimp,cow,dog,elephant,horse,human,macaque,marmoset,orangutan,pig, lincRNA processed_transcript A549@19.2892,AG04450@7.34371,BJ@5.83485,GM12878@15.7412,H1HESC@32.7601,HELAS3@18.8315,HEPG2@24.7435,HMEC@9.0323,HSMM@4.46079,HUVEC@8.48605,K562@10.105,MCF7@20.8582,NHEK@14.6642,NHLF@3.79914,SKNSHRA@21.4523, 0 0 0 0 ENSG00000225151.4 ENST00000316967.6 chr15:84868064-84898888 7 2518 28294 intergenic 21.54 0 0,1,0 0 0,1,0 0 0 0 0 0.250971937513254 0 201.357823669579 32.1294267335831 0 0 0 cat,cow,dog,elephant,guinea_pig,horse,human,marmoset,panda,pig,rat, lincRNA processed_transcript A549@19.2892,AG04450@7.34371,BJ@5.83485,GM12878@15.7412,H1HESC@32.7601,HELAS3@18.8315,HEPG2@24.7435,HMEC@9.0323,HSMM@4.46079,HUVEC@8.48605,K562@10.105,MCF7@20.8582,NHEK@14.6642,NHLF@3.79914,SKNSHRA@21.4523, 0 0 0 0 ENSG00000225151.4 ENST00000335068.5 chr15:84868065-84898890 7 2845 27968 intergenic 10.25 0 0,1,0 0 0,1,0 0 0 0 0 0.253897311212815 0 183.150087873462 31.9936713386728 0 0 0 cat,cow,human,marmoset,pig,rat, lincRNA processed_transcript A549@19.2892,AG04450@7.34371,BJ@5.83485,GM12878@15.7412,H1HESC@32.7601,HELAS3@18.8315,HEPG2@24.7435,HMEC@9.0323,HSMM@4.46079,HUVEC@8.48605,K562@10.105,MCF7@20.8582,NHEK@14.6642,NHLF@3.79914,SKNSHRA@21.4523, 0 0 0 0 ENSG00000225151.4 ENST00000456029.1 chr15:84869932-84874024 7 733 3347 intergenic 16.41 0 0,1,0 0 0,1,0 0 0 0 0 0 0 333.491132332879 188.51359426352 77.904 0 0 cat,chimp,cow,dog,elephant,guinea_pig,horse,human,macaque,marmoset,orangutan,pig,rat, lincRNA processed_transcript A549@19.2892,AG04450@7.34371,BJ@5.83485,GM12878@15.7412,H1HESC@32.7601,HELAS3@18.8315,HEPG2@24.7435,HMEC@9.0323,HSMM@4.46079,HUVEC@8.48605,K562@10.105,MCF7@20.8582,NHEK@14.6642,NHLF@3.79914,SKNSHRA@21.4523, 0 0 0 0 ENSG00000203466.2 ENST00000535062.1 chr15:85142662-85149696 3 600 6430 exonic 6.99 0 0,1,0 0 0,0,0 0 21.4889580093313 0 12.8033333333333 33.5598755832037 0 19.8333333333333 33.0301710730949 0 0 0 chimp,guinea_pig,human,macaque,marmoset,orangutan, antisense antisense A549@0.0071375,AG04450@0.007434,BJ@0.0121095,GM12878@0,H1HESC@0.00344,HELAS3@0,HEPG2@0,HMEC@0.00679,HSMM@0.0140175,HUVEC@0.021089,K562@0,MCF7@0.0066685,NHEK@0,NHLF@0.016335,SKNSHRA@0.003769, 0 0 0 0 ENSG00000203466.2 ENST00000366284.2 chr15:85142665-85147107 2 385 4055 exonic -19.74 0 0,0,0 0 0,0,0 0 5.0288532675709 112.942 9.11688311688312 19.6194821208385 120.941 9.75844155844156 18.5807644882861 123.807 0 0 chimp,human,macaque,marmoset,orangutan,panda, antisense antisense A549@0.0071375,AG04450@0.007434,BJ@0.0121095,GM12878@0,H1HESC@0.00344,HELAS3@0,HEPG2@0,HMEC@0.00679,HSMM@0.0140175,HUVEC@0.021089,K562@0,MCF7@0.0066685,NHEK@0,NHLF@0.016335,SKNSHRA@0.003769, 1 96 0 0 ENSG00000256278.1 ENST00000542197.1 chr15:85154920-85158200 2 1016 2262 intronic 5.23 0 0,0,0 0 0,0,0 0 0 0 0 0 0 0 46.1892130857648 0 1 1 chimp,human,macaque,marmoset,orangutan, antisense antisense A549@0,AG04450@0.006335,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0.00263,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000176700.14 ENST00000348993.5 chr15:85174682-85185695 4 3957 7050 intergenic 14.72 1 0,1,0 1 0,1,0 0 0 0 7.2749557745767 7.02156028368794 0 14.2625726560526 80.7387234042553 2.556 0 1 chimp,human,orangutan, processed_transcript processed_transcript A549@1.29898,AG04450@0.734482,BJ@0.916187,GM12878@1.2753,H1HESC@0.659459,HELAS3@2.12603,HEPG2@1.07739,HMEC@0.546132,HSMM@0.431978,HUVEC@0.794347,K562@2.02157,MCF7@1.42207,NHEK@0.656313,NHLF@0.464976,SKNSHRA@1.2734, 0 0 0 0 ENSG00000176700.14 ENST00000427525.2 chr15:85174710-85178652 2 2416 1524 intergenic 56.60 0 0,1,0 1 0,1,0 0 0 0 29.6423841059603 0 0 240.880794701987 22.8464566929134 2.556 0 0 chimp,human,orangutan,rabbit, processed_transcript processed_transcript A549@1.29898,AG04450@0.734482,BJ@0.916187,GM12878@1.2753,H1HESC@0.659459,HELAS3@2.12603,HEPG2@1.07739,HMEC@0.546132,HSMM@0.431978,HUVEC@0.794347,K562@2.02157,MCF7@1.42207,NHEK@0.656313,NHLF@0.464976,SKNSHRA@1.2734, 0 0 0 0 ENSG00000176700.14 ENST00000541482.1 chr15:85175058-85181644 3 601 5981 intergenic 13.88 0 0,0,1 0 0,1,0 0 0 0 41.3344425956739 8.27654238421669 0 84.3627287853577 95.1693696706236 2.556 0 0 cat,chimp,cow,dog,elephant,guinea_pig,horse,human,macaque,marmoset,mouse,opossum,orangutan,panda,pig,platypus,rabbit,rat, processed_transcript processed_transcript A549@1.29898,AG04450@0.734482,BJ@0.916187,GM12878@1.2753,H1HESC@0.659459,HELAS3@2.12603,HEPG2@1.07739,HMEC@0.546132,HSMM@0.431978,HUVEC@0.794347,K562@2.02157,MCF7@1.42207,NHEK@0.656313,NHLF@0.464976,SKNSHRA@1.2734, 0 0 0 0 ENSG00000254414.1 ENST00000527801.1 chr15:85175129-85177218 2 843 1244 intergenic 7.09 0 0,0,0 0 0,0,0 0 0 0 27.4092526690391 0 0 138.582443653618 11.645498392283 431.406 0 0 cat,chimp,cow,dog,elephant,guinea_pig,horse,human,macaque,marmoset,mouse,opossum,orangutan,panda,pig,platypus,rabbit, lincRNA lincRNA A549@0.143105,AG04450@0.051687,BJ@0.145286,GM12878@0.027641,H1HESC@0.208474,HELAS3@0.0401965,HEPG2@0.0816035,HMEC@0.092068,HSMM@0.155627,HUVEC@0.201999,K562@0.0502595,MCF7@0.0576155,NHEK@0.0570877,NHLF@0.179461,SKNSHRA@0.0213935, 0 0 0 0 ENSG00000249487.1 ENST00000506090.1 chr15:89128802-89147834 3 1832 17196 intergenic 5.04 0 0,1,0 0 0,0,0 48.2598253275109 2.13613631076995 0 30.0807860262009 2.67661083973017 18.176 30.3586244541485 3.43294952314492 15.126 0 0 chimp,guinea_pig,horse,human,macaque,marmoset,orangutan, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0.002477, 0 0 0 0 ENSG00000255571.1 ENST00000536780.1 chr15:89904810-89938553 7 1606 32125 intergenic 11.75 0 0,0,0 0 0,0,0 16.1488169364882 84.0915486381323 80.263 53.4283935242839 93.6738988326848 110.756 49.6114570361146 91.7609338521401 116.805 0 0 chimp,cow,dog,elephant,human,macaque,marmoset,pig, lincRNA lincRNA A549@0.046539,AG04450@0.0032035,BJ@0.007767,GM12878@0,H1HESC@0.429408,HELAS3@0.002588,HEPG2@0.0012995,HMEC@0.01308,HSMM@0.0261585,HUVEC@0.0097835,K562@0.0296895,MCF7@1.04237,NHEK@0.00661567,NHLF@0,SKNSHRA@0.338283, 0 0 0 0 ENSG00000255571.1 ENST00000546186.1 chr15:89911330-89941718 8 2116 28258 intergenic 4.95 0 0,1,0 0 0,0,0 104.610586011342 81.8514049118834 110.586 125.831285444234 90.4000283105669 202.386 133.721644612476 88.6359968858376 178.514 0 0 cat,elephant,guinea_pig,human,macaque,marmoset,mouse,orangutan,panda,pig,rabbit,rat, lincRNA lincRNA A549@0.046539,AG04450@0.0032035,BJ@0.007767,GM12878@0,H1HESC@0.429408,HELAS3@0.002588,HEPG2@0.0012995,HMEC@0.01308,HSMM@0.0261585,HUVEC@0.0097835,K562@0.0296895,MCF7@1.04237,NHEK@0.00661567,NHLF@0,SKNSHRA@0.338283, 0 0 0 0 ENSG00000255571.1 ENST00000538734.1 chr15:89921273-89941718 7 4191 16242 intergenic 13.77 0 0,1,0 0 0,0,0 44.6750178954903 70.3864671838444 0 47.6363636363636 77.8832040389115 14.688 53.8401336196612 77.1295406969585 15.348 0 1 chimp,human,marmoset, lincRNA lincRNA A549@0.046539,AG04450@0.0032035,BJ@0.007767,GM12878@0,H1HESC@0.429408,HELAS3@0.002588,HEPG2@0.0012995,HMEC@0.01308,HSMM@0.0261585,HUVEC@0.0097835,K562@0.0296895,MCF7@1.04237,NHEK@0.00661567,NHLF@0,SKNSHRA@0.338283, 0 0 0 0 ENSG00000245479.1 ENST00000500496.1 chr15:91203465-91208160 3 1254 3437 intergenic -1.72 0 0,0,0 0 0,0,0 0 2.880418970032 0 2.37320574162679 0.468431771894094 0 2.47846889952153 0.494908350305499 0 0 1 chimp,human,macaque,orangutan, lincRNA lincRNA A549@0.0051805,AG04450@0,BJ@0.0077005,GM12878@0.367635,H1HESC@0,HELAS3@0.0042225,HEPG2@0,HMEC@0,HSMM@0.003627,HUVEC@0,K562@0.02989,MCF7@0,NHEK@0,NHLF@0.0046225,SKNSHRA@0, 0 0 0 0 ENSG00000214432.3 ENST00000389283.4 chr15:91413148-91579841 4 1944 164743 intronic 1.77 0 0,1,0 0 0,0,0 0 37.4773070782977 0 1.61316872427984 51.7250201829517 16.863 9.56018518518519 57.9237600383629 18.478 0 0 chimp,human,macaque,marmoset,orangutan,pig, lincRNA lincRNA A549@0.147766,AG04450@0.097211,BJ@0.09176,GM12878@0.089208,H1HESC@0.056148,HELAS3@0.100479,HEPG2@0.0555175,HMEC@0.071532,HSMM@0.0194575,HUVEC@0.026976,K562@0.197189,MCF7@0.107158,NHEK@0.0266203,NHLF@0.047643,SKNSHRA@0.154047, 0 0 0 0 ENSG00000224441.1 ENST00000448987.1 chr15:91475816-91478360 2 365 2177 exonic 1.01 0 0,1,1 1 0,0,0 0 14.8350941662839 84.926 48.7917808219178 37.1378043178686 105.618 34.3561643835616 31.3137344970142 104.237 0 0 cat,chimp,cow,dog,elephant,horse,human,macaque,orangutan,panda,pig,rabbit, antisense antisense A549@0.018379,AG04450@0,BJ@0.006594,GM12878@0,H1HESC@0.0056525,HELAS3@0.0453495,HEPG2@0,HMEC@0.011157,HSMM@0.011213,HUVEC@0,K562@0,MCF7@0.0112045,NHEK@0.010657,NHLF@0,SKNSHRA@0.186427, 0 0 0 0 ENSG00000224441.1 ENST00000438890.1 chr15:91475832-91478284 2 222 2228 exonic 1.01 0 0,1,1 1 0,0,0 0 14.4955116696589 81.468 48.2612612612613 36.2877019748653 106.577 39.7747747747748 30.596947935368 101.416 0 0 cat,chimp,dog,human,macaque,marmoset,orangutan, antisense antisense A549@0.018379,AG04450@0,BJ@0.006594,GM12878@0,H1HESC@0.0056525,HELAS3@0.0453495,HEPG2@0,HMEC@0.011157,HSMM@0.011213,HUVEC@0,K562@0,MCF7@0.0112045,NHEK@0.010657,NHLF@0,SKNSHRA@0.186427, 0 0 0 0 ENSG00000214432.3 ENST00000501381.1 chr15:91565852-91574370 4 1617 6895 intergenic -0.14 0 1,1,1 1 0,0,0 0 0 45.48 4.85714285714286 0 72.728 25.0983302411874 7.76229151559101 70.348 1 1 chimp,human,macaque,marmoset,orangutan, lincRNA lincRNA A549@0.147766,AG04450@0.097211,BJ@0.09176,GM12878@0.089208,H1HESC@0.056148,HELAS3@0.100479,HEPG2@0.0555175,HMEC@0.071532,HSMM@0.0194575,HUVEC@0.026976,K562@0.197189,MCF7@0.107158,NHEK@0.0266203,NHLF@0.047643,SKNSHRA@0.154047, 0 0 0 0 ENSG00000257060.1 ENST00000543286.1 chr15:93855786-94098099 4 2008 240299 intergenic 2.80 0 0,0,0 0 0,0,0 0 6.80995759449686 0 2.45766932270916 6.40442532012202 0 4.31922310756972 10.3843961065173 0 0 1 chimp,human,macaque,orangutan, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0.033573,HELAS3@0,HEPG2@0.015158,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0.00131233,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000248441.1 ENST00000508732.1 chr15:95822521-95870329 4 1372 46430 intergenic 3.56 0 0,1,0 1 0,0,0 36.8483965014577 89.4961016584105 18.17 16.7558309037901 71.7282360542752 6.619 29.3848396501458 80.5694378634504 17.577 0 0 chimp,dog,elephant,horse,human,macaque,marmoset,mouse,orangutan,panda,pig,rabbit,rat, lincRNA lincRNA A549@0,AG04450@0.003258,BJ@0.007157,GM12878@0.0310085,H1HESC@0.0035965,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0.0014955,HUVEC@2.90096,K562@0,MCF7@0.002922,NHEK@0,NHLF@0.161403,SKNSHRA@0, 0 0 0 0 ENSG00000247809.2 ENST00000502125.1 chr15:96812001-96870577 6 1911 56655 intronic 1.69 0 1,1,1 0 0,0,0 212.209314495029 119.82834701262 430.524 187.813186813187 95.6947312682023 404.617 207.445839874411 100.283964345601 434.486 0 0 chimp,cow,guinea_pig,human,macaque,marmoset,orangutan,pig, lincRNA lincRNA A549@0.312801,AG04450@1.06147,BJ@1.00364,GM12878@1.37881,H1HESC@0.006815,HELAS3@0.254757,HEPG2@0.44299,HMEC@0.335805,HSMM@0.293986,HUVEC@1.55744,K562@0.999024,MCF7@0.710933,NHEK@0.3016,NHLF@0.659214,SKNSHRA@0.011848, 0 0 0 0 ENSG00000248661.2 ENST00000541690.1 chr15:96902892-96907471 2 4477 100 intergenic 0.95 0 0,0,0 0 0,0,0 256.673888764798 0 1.299 232.949743131561 27 6.645 253.672995309359 30.4 14.705 0 0 cat,chimp,dog,elephant,horse,human,macaque,orangutan,panda,rabbit,rat, lincRNA lincRNA A549@0,AG04450@0,BJ@0.0010805,GM12878@0.0420505,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0.013365,HUVEC@0.007067,K562@0,MCF7@0.0049615,NHEK@0,NHLF@0.0008615,SKNSHRA@0, 0 0 0 0 ENSG00000251209.1 ENST00000503768.1 chr15:98285543-98417780 3 1938 130295 intergenic -1.66 0 0,1,0 0 0,1,0 15.922600619195 28.948363329368 41.724 1.35655314757482 20.3303196592348 6.38 0.518059855521156 23.651053378871 6.42 0 1 chimp,human,orangutan, lincRNA lincRNA A549@0.44597,AG04450@0,BJ@0.0053205,GM12878@0.0017425,H1HESC@0.0030845,HELAS3@0.0681285,HEPG2@0.045068,HMEC@0,HSMM@0,HUVEC@0,K562@1.8695,MCF7@0.0015285,NHEK@0.168832,NHLF@0.001988,SKNSHRA@0.519522, 0 0 0 0 ENSG00000251209.1 ENST00000503874.1 chr15:98285846-98417659 2 1343 130468 intergenic 0.39 0 0,0,0 0 0,1,0 11.885331347729 28.9099779256216 56.615 1.60163812360387 20.3033617438759 6.619 0.747580044676098 23.6196921850569 6.42 0 1 chimp,human,orangutan, lincRNA lincRNA A549@0.44597,AG04450@0,BJ@0.0053205,GM12878@0.0017425,H1HESC@0.0030845,HELAS3@0.0681285,HEPG2@0.045068,HMEC@0,HSMM@0,HUVEC@0,K562@1.8695,MCF7@0.0015285,NHEK@0.168832,NHLF@0.001988,SKNSHRA@0.519522, 0 0 0 0 ENSG00000254744.1 ENST00000528696.1 chr15:100510055-100514105 4 662 3382 exonic 0.49 1 0,1,0 0 0,0,0 0 22.2519219396807 0 0 31.0266114725015 0 0 46.3007096392667 0 0 0 cat,chimp,horse,human,macaque,marmoset,orangutan,panda,pig, antisense antisense A549@0.0198485,AG04450@0.016414,BJ@0.0181675,GM12878@0.078063,H1HESC@0.287805,HELAS3@0,HEPG2@0.547146,HMEC@0,HSMM@0.01987,HUVEC@0.0134055,K562@0,MCF7@0.003087,NHEK@0,NHLF@0.0058595,SKNSHRA@0.034102, 0 0 0 0 ENSG00000232386.2 ENST00000431060.2 chr15:101390036-101404487 5 3888 10555 intergenic 5.79 0 0,1,0 1 0,1,0 75.3726851851852 27.6561819043108 9.424 51.133487654321 22.041023211748 36.069 68.2970679012346 24.6396020843202 69.214 0 1 chimp,human,macaque,orangutan, lincRNA lincRNA A549@0.284506,AG04450@0.028534,BJ@0.0912635,GM12878@0.009147,H1HESC@0.021234,HELAS3@1.27563,HEPG2@0.317408,HMEC@0.090768,HSMM@0.0005855,HUVEC@0.0541215,K562@0.002776,MCF7@2.02832,NHEK@0.155465,NHLF@0.0134935,SKNSHRA@0.002857, 0 0 0 0 ENSG00000256099.1 ENST00000534888.1 chr15:102062800-102068552 3 2448 3300 intergenic 5.06 0 0,1,0 0 0,0,0 0 0 13.771 0 0 36.575 0.397058823529412 0 43.555 0 0 chimp,horse,human,macaque,marmoset,orangutan, lincRNA lincRNA A549@0.0997605,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0.102181,HEPG2@0.252084,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0.0016405,NHEK@0,NHLF@0.0079185,SKNSHRA@0, 0 0 0 0 ENSG00000233614.4 ENST00000545636.1 chr16:61553-64093 3 1650 886 exonic 1.08 1 0,1,0 0 0,0,0 0 0 0 0 0 0 107.104242424242 87.8532731376975 0 0 0 cat,chimp,cow,dog,elephant,horse,human,macaque,marmoset,orangutan, processed_transcript processed_transcript A549@0.208885,AG04450@0.026218,BJ@0.0831765,GM12878@0.060204,H1HESC@0.001799,HELAS3@0.119048,HEPG2@0.13923,HMEC@0.233038,HSMM@0.119311,HUVEC@0.0125785,K562@0.152205,MCF7@0.176117,NHEK@0.029927,NHLF@0.341059,SKNSHRA@0.0557815, 0 0 0 0 ENSG00000233614.4 ENST00000513886.1 chr16:61555-64090 3 1649 882 exonic 7.70 1 0,1,0 0 0,0,0 0 0 0 0 0 0 108.44754396604 85.8616780045352 0 0 0 cat,chimp,cow,dog,elephant,horse,human,macaque,marmoset,orangutan,pig, processed_transcript processed_transcript A549@0.208885,AG04450@0.026218,BJ@0.0831765,GM12878@0.060204,H1HESC@0.001799,HELAS3@0.119048,HEPG2@0.13923,HMEC@0.233038,HSMM@0.119311,HUVEC@0.0125785,K562@0.152205,MCF7@0.176117,NHEK@0.029927,NHLF@0.341059,SKNSHRA@0.0557815, 0 0 0 0 ENSG00000231439.3 ENST00000329244.5 chr16:72910-75123 3 1077 1132 intergenic 3.61 1 0,1,0 0 0,1,0 0 0 0 0 0 0 0 0 0 1 1 chimp,human,macaque,marmoset,orangutan, antisense non_coding A549@0.120373,AG04450@0,BJ@0.0208635,GM12878@0.0741455,H1HESC@0.231815,HELAS3@0.0079205,HEPG2@0.12287,HMEC@0.042733,HSMM@0.001952,HUVEC@0,K562@0.833931,MCF7@0.687179,NHEK@0.00625433,NHLF@0.005533,SKNSHRA@0.544141, 38 3 0 0 ENSG00000231439.3 ENST00000527434.1 chr16:72910-75123 2 1052 1159 intergenic 9.57 1 0,1,0 0 0,1,0 0 0 0 0 0 0 0 0 0 1 1 chimp,human,macaque,marmoset,orangutan, antisense non_coding A549@0.120373,AG04450@0,BJ@0.0208635,GM12878@0.0741455,H1HESC@0.231815,HELAS3@0.0079205,HEPG2@0.12287,HMEC@0.042733,HSMM@0.001952,HUVEC@0,K562@0.833931,MCF7@0.687179,NHEK@0.00625433,NHLF@0.005533,SKNSHRA@0.544141, 0 0 0 0 ENSG00000228779.1 ENST00000445733.1 chr16:175736-177218 2 799 681 intronic -8.38 0 0,1,0 0 0,0,0 0 0 0 0 0 0 0 0 0 0 0 chimp,human,macaque,marmoset,orangutan, antisense antisense A549@0.008421,AG04450@0,BJ@0,GM12878@0,H1HESC@0.0061785,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0.0028325, 0 0 0 0 ENSG00000236829.4 ENST00000412293.1 chr16:432097-442960 3 1712 9147 intronic 6.84 0 0,1,0 0 0,0,0 0 0 0 0 10.3670055755986 79.637 0 39.9380124631027 80.721 0 0 human,orangutan, processed_transcript processed_transcript A549@0.124078,AG04450@0.15562,BJ@0.063819,GM12878@0.10709,H1HESC@0.424368,HELAS3@0.226821,HEPG2@0.439906,HMEC@0.022179,HSMM@0.007893,HUVEC@0.09458,K562@0.0874035,MCF7@0.541365,NHEK@0.024254,NHLF@0.158323,SKNSHRA@0.606245, 0 0 0 0 ENSG00000236829.4 ENST00000457760.1 chr16:432150-437242 3 1041 4047 exonic 44.50 1 1,1,1 0 0,0,0 0 0 0 91.0922190201729 0 79.637 350.92507204611 0 80.721 0 0 chimp,human,panda,pig,rabbit, processed_transcript processed_transcript A549@0.124078,AG04450@0.15562,BJ@0.063819,GM12878@0.10709,H1HESC@0.424368,HELAS3@0.226821,HEPG2@0.439906,HMEC@0.022179,HSMM@0.007893,HUVEC@0.09458,K562@0.0874035,MCF7@0.541365,NHEK@0.024254,NHLF@0.158323,SKNSHRA@0.606245, 0 0 0 0 ENSG00000236829.4 ENST00000544386.1 chr16:436663-437323 1 660 0 exonic 44.50 1 0,0,1 0 0,0,0 0 0 0 143.677272727273 0 0 553.504545454545 0 0 0 0 cat,chimp,cow,dog,elephant,guinea_pig,horse,human,macaque,marmoset,mouse,opossum,orangutan,panda,pig,rabbit,rat, processed_transcript processed_transcript A549@0.124078,AG04450@0.15562,BJ@0.063819,GM12878@0.10709,H1HESC@0.424368,HELAS3@0.226821,HEPG2@0.439906,HMEC@0.022179,HSMM@0.007893,HUVEC@0.09458,K562@0.0874035,MCF7@0.541365,NHEK@0.024254,NHLF@0.158323,SKNSHRA@0.606245, 0 0 0 0 ENSG00000228201.1 ENST00000455294.1 chr16:698473-699200 2 387 338 exonic 2.80 1 1,1,1 0 0,0,0 0 0 0 0.731266149870801 0 67.644 0.839793281653747 0 110.286 0 0 chimp,human,macaque,marmoset,orangutan, antisense antisense A549@0.163112,AG04450@0.081619,BJ@0.215165,GM12878@0.112464,H1HESC@0.182416,HELAS3@0.289472,HEPG2@0.452028,HMEC@0.094734,HSMM@0.165849,HUVEC@0.116573,K562@0,MCF7@0.0373965,NHEK@0.09916,NHLF@0.07,SKNSHRA@0.495048, 0 0 0 0 ENSG00000206088.1 ENST00000339021.2 chr16:1355571-1359414 2 3219 622 exonic -0.90 0 0,1,0 0 0,1,0 8.07300403852128 0 31.568 8.24231127679404 0 398.39 9.09878844361603 0 89.05 0 1 chimp,human,orangutan, lincRNA lincRNA A549@0.019097,AG04450@0.010095,BJ@0.020133,GM12878@0.125132,H1HESC@0.330746,HELAS3@0.184332,HEPG2@0.208133,HMEC@0.127813,HSMM@0.0144765,HUVEC@0.153371,K562@0.094251,MCF7@0.111781,NHEK@0.016738,NHLF@0.0192515,SKNSHRA@0.091249, 0 0 0 0 ENSG00000226890.1 ENST00000415176.1 chr16:1675629-1676161 2 327 203 exonic -2.59 0 0,1,0 0 0,0,0 155.327217125382 0 0.364 186.960244648318 0 8.598 195.452599388379 0 9.754 0 0 chimp,horse,human,macaque,marmoset,orangutan,rabbit, antisense antisense A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0.006254,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000255198.1 ENST00000531523.1 chr16:2014960-2015510 2 273 275 intergenic 0 1 1,1,1 1 0,0,0 0 60.7636363636364 53.55 8.17582417582418 136.16 124.887 7.76556776556777 149.101818181818 244.75 1 1 chimp,human,macaque,marmoset,orangutan, antisense non_coding A549@1.96124,AG04450@0.917266,BJ@1.03665,GM12878@0.992155,H1HESC@0.175304,HELAS3@0.807881,HEPG2@0.441249,HMEC@0.134006,HSMM@0.11227,HUVEC@0.365339,K562@2.30753,MCF7@0.125113,NHEK@1.43812,NHLF@0.0916075,SKNSHRA@1.64247, 0 0 0 0 ENSG00000215154.1 ENST00000399702.1 chr16:2653351-2680495 4 2744 24394 intronic 9.70 0 0,1,1 1 0,0,0 0 1.86045748954661 175.53 77.935860058309 9.23013855866197 282.19 66.4653790087464 13.5140608346315 390.266 0 0 human, antisense antisense A549@0.746358,AG04450@0.555421,BJ@0.484392,GM12878@1.30539,H1HESC@2.07883,HELAS3@1.19207,HEPG2@1.22403,HMEC@1.32009,HSMM@1.37648,HUVEC@0.9494,K562@1.19115,MCF7@1.72954,NHEK@1.21121,NHLF@1.22742,SKNSHRA@1.70117, 0 0 0 0 ENSG00000249402.1 ENST00000506353.1 chr16:3160462-3165599 3 1215 3918 exonic 2.67 0 0,1,1 0 0,0,0 0 12.6217457886677 46.003 4.67736625514403 12.5612557427259 80.225 5.90699588477366 16.6909137314957 77.959 1 1 chimp,human,macaque,marmoset,orangutan, lincRNA lincRNA A549@0.178694,AG04450@0.179668,BJ@0.266255,GM12878@0.119871,H1HESC@0.0939445,HELAS3@0.301984,HEPG2@0.355258,HMEC@0.070597,HSMM@0.138968,HUVEC@0.162881,K562@0.0874685,MCF7@0.334585,NHEK@0.0417513,NHLF@0.098113,SKNSHRA@0.498915, 0 0 0 0 ENSG00000245923.1 ENST00000501618.1 chr16:3178837-3182043 2 1112 2092 intergenic 11.72 0 0,0,1 0 0,0,0 0 0 0 0 0 0 0 0 0 0 1 chimp,human,orangutan, lincRNA lincRNA A549@3.45214,AG04450@1.88684,BJ@4.21809,GM12878@3.33547,H1HESC@9.64229,HELAS3@7.81883,HEPG2@6.05428,HMEC@1.81207,HSMM@3.62216,HUVEC@5.87457,K562@5.47359,MCF7@7.98416,NHEK@2.33355,NHLF@2.42748,SKNSHRA@6.13765, 0 0 0 0 ENSG00000245388.1 ENST00000500351.1 chr16:4295826-4303790 3 2090 5870 intergenic 3.12 0 0,1,0 1 0,0,0 4.7 0 0 0 8.04974446337308 12.676 0 10.6562180579216 13.016 1 1 chimp,human,macaque,marmoset,orangutan, lincRNA lincRNA A549@0.399455,AG04450@0.272159,BJ@0.314234,GM12878@0.409339,H1HESC@0.516795,HELAS3@0.592491,HEPG2@0.353572,HMEC@0.436926,HSMM@0.193688,HUVEC@0.202033,K562@0.829571,MCF7@1.40212,NHEK@0.201598,NHLF@0.452608,SKNSHRA@0.463931, 0 0 0 0 ENSG00000256013.1 ENST00000535363.1 chr16:10623297-10625939 2 531 2109 exonic 0.10 0 0,0,1 0 0,0,0 0 0 21.389 0 0 43.308 0 0 59.994 0 0 chimp,elephant,human,macaque,marmoset,orangutan, antisense antisense A549@0.02531,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0.0576245,HEPG2@0.010994,HMEC@0,HSMM@0.007721,HUVEC@0,K562@0,MCF7@0.014127,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000248575.1 ENST00000505806.1 chr16:11913694-11922689 4 1303 7686 intergenic 0.28 0 0,1,0 0 0,0,0 0 0 0 0 0 0 0 0 0 0 1 human,macaque,marmoset,orangutan, lincRNA lincRNA A549@0,AG04450@0.0072075,BJ@0.031563,GM12878@0,H1HESC@0.011081,HELAS3@0.0134215,HEPG2@0.02087,HMEC@0,HSMM@0.0015745,HUVEC@0.015716,K562@0.0268545,MCF7@0.0192535,NHEK@0.00748567,NHLF@0.008858,SKNSHRA@0.008689, 0 0 0 0 ENSG00000188477.7 ENST00000493231.1 chr16:19297061-19333467 3 554 35848 intergenic 5.41 0 0,1,0 0 0,1,0 119.729241877256 4.39285315777728 15.498 182.640794223827 6.99386297701406 3 228.370036101083 9.68768132113367 5.457 0 0 cat,chimp,cow,dog,elephant,horse,human,macaque,marmoset,opossum,orangutan,pig,platypus,rabbit, lincRNA lincRNA A549@0.0306895,AG04450@0,BJ@0,GM12878@0.002578,H1HESC@0.134454,HELAS3@0,HEPG2@0.0146915,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0.001708,NHEK@0,NHLF@0,SKNSHRA@0.0053155, 0 0 0 0 ENSG00000188477.7 ENST00000465414.1 chr16:19297101-19315722 3 663 17954 intergenic 5.17 0 0,0,0 0 0,1,0 151.778280542986 3.49654673053359 15.498 195.131221719457 6.64403475548624 3 250.849170437406 7.69650217221789 5.457 0 0 chimp,cow,dog,elephant,guinea_pig,horse,human,macaque,marmoset,orangutan,panda,pig,rabbit, lincRNA retained_intron A549@0.0306895,AG04450@0,BJ@0,GM12878@0.002578,H1HESC@0.134454,HELAS3@0,HEPG2@0.0146915,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0.001708,NHEK@0,NHLF@0,SKNSHRA@0.0053155, 0 0 0 0 ENSG00000188477.7 ENST00000476906.1 chr16:19297105-19315716 4 778 17827 intergenic 5.55 0 0,0,0 0 0,1,0 135.543701799486 3.27340550849835 15.498 112.719794344473 6.49009928759746 3 147.692802056555 7.54400628260504 5.457 0 0 chimp,cow,dog,elephant,human,macaque,marmoset,orangutan,panda,pig,rabbit, lincRNA retained_intron A549@0.0306895,AG04450@0,BJ@0,GM12878@0.002578,H1HESC@0.134454,HELAS3@0,HEPG2@0.0146915,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0.001708,NHEK@0,NHLF@0,SKNSHRA@0.0053155, 0 0 0 0 ENSG00000188477.7 ENST00000468219.1 chr16:19316203-19322269 3 2378 3684 intergenic 6.84 1 0,0,0 0 0,1,0 20.4293523969722 3.03311617806732 35.631 20.6400336417157 2.207111834962 29.649 33.6606391925988 3.87350705754615 41.724 0 1 chimp,human,macaque,orangutan, lincRNA lincRNA A549@0.0306895,AG04450@0,BJ@0,GM12878@0.002578,H1HESC@0.134454,HELAS3@0,HEPG2@0.0146915,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0.001708,NHEK@0,NHLF@0,SKNSHRA@0.0053155, 0 0 0 0 ENSG00000246328.1 ENST00000501740.1 chr16:20685853-20693496 2 3307 4334 intronic 6.02 0 1,1,1 0 0,0,0 0 0 0 0 0 0 292.249470819474 0 0 0 0 NA lincRNA lincRNA A549@0.0041265,AG04450@0,BJ@0.003912,GM12878@0.166183,H1HESC@0.085003,HELAS3@3.54062,HEPG2@9.48741,HMEC@0,HSMM@0,HUVEC@6.99815,K562@4.85356,MCF7@0.119305,NHEK@0.00219,NHLF@0,SKNSHRA@0.0054855, 0 0 0 0 ENSG00000189149.6 ENST00000338573.5 chr16:21312170-21329269 3 1658 15437 intronic 10.98 0 1,1,1 1 0,0,0 3.25512665862485 0.332966249919026 0 11.3697225572979 0.852432467448338 43.098 13.7967430639324 0.859946880870635 43.275 0 0 chimp,human,marmoset,orangutan,panda, lincRNA processed_transcript A549@0.197991,AG04450@0.091608,BJ@0.06776,GM12878@0.162085,H1HESC@0.0258275,HELAS3@0.192073,HEPG2@0.173811,HMEC@0.05332,HSMM@0.020166,HUVEC@0.0296355,K562@0.142376,MCF7@0.224627,NHEK@0.149945,NHLF@0.027802,SKNSHRA@0.0698575, 0 0 0 0 ENSG00000189149.6 ENST00000444326.1 chr16:21314568-21329912 3 2025 13315 intergenic -9.85 0 0,0,1 0 0,0,0 2.66518518518519 0.386030792339467 0 11.5758024691358 0.298835899361622 9.18 19.0834567901235 0.302440856177244 9.248 0 0 chimp,human,macaque,marmoset,orangutan, lincRNA processed_transcript A549@0.197991,AG04450@0.091608,BJ@0.06776,GM12878@0.162085,H1HESC@0.0258275,HELAS3@0.192073,HEPG2@0.173811,HMEC@0.05332,HSMM@0.020166,HUVEC@0.0296355,K562@0.142376,MCF7@0.224627,NHEK@0.149945,NHLF@0.027802,SKNSHRA@0.0698575, 0 0 0 0 ENSG00000245927.1 ENST00000499112.1 chr16:21601019-21610706 3 1330 8353 intergenic 4.30 0 0,1,1 0 0,0,0 0 13.1816113971028 148.519 7.75413533834586 19.748234167365 174.183 8.06766917293233 27.7177062133365 164.537 0 1 chimp,human, lincRNA lincRNA A549@0.119721,AG04450@0.0189555,BJ@0.0398105,GM12878@0.37668,H1HESC@0.238359,HELAS3@0.257989,HEPG2@0.140945,HMEC@0.012287,HSMM@0.0419645,HUVEC@0.0676735,K562@0.135012,MCF7@0.413708,NHEK@0.00685633,NHLF@0.0029275,SKNSHRA@0.100014, 0 0 0 0 ENSG00000185716.6 ENST00000542527.1 chr16:22019456-22095970 3 4437 72073 intergenic 2.75 0 0,1,1 1 0,0,1 521.356096461573 10.7514048256629 33.512 475.578318683795 11.0978868647066 28.168 493.242055442867 13.5857810830686 27.408 0 0 chimp,dog,human,orangutan,platypus, lincRNA processed_transcript A549@2.0419,AG04450@2.0421,BJ@1.36037,GM12878@3.30075,H1HESC@1.45168,HELAS3@3.58491,HEPG2@4.70854,HMEC@3.23822,HSMM@1.24997,HUVEC@1.71096,K562@1.58926,MCF7@1.66094,NHEK@2.69475,NHLF@1.85892,SKNSHRA@3.1772, 0 0 0 0 ENSG00000185716.6 ENST00000331057.4 chr16:22019530-22098855 7 1352 77961 intergenic 19.86 1 1,1,1 1 0,0,1 294.494822485207 35.3197367914726 68.44 294.054733727811 33.2498043893742 39.454 344.002218934911 35.9390592732263 34.193 0 0 chimp,cow,human,macaque,marmoset,orangutan, lincRNA processed_transcript A549@2.0419,AG04450@2.0421,BJ@1.36037,GM12878@3.30075,H1HESC@1.45168,HELAS3@3.58491,HEPG2@4.70854,HMEC@3.23822,HSMM@1.24997,HUVEC@1.71096,K562@1.58926,MCF7@1.66094,NHEK@2.69475,NHLF@1.85892,SKNSHRA@3.1772, 0 0 0 0 ENSG00000224310.1 ENST00000414816.1 chr16:24672743-24682383 3 2904 6732 intergenic -2.04 0 0,0,0 0 0,0,0 25.2427685950413 20.6488413547237 108.6 11.4855371900826 20.8370469399881 7.674 9.607782369146 21.7306892453951 4.928 0 0 chimp,human,marmoset,orangutan, lincRNA lincRNA A549@0.0014935,AG04450@0.00081,BJ@0.00333,GM12878@0.0670315,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0.002984,HUVEC@0.001837,K562@0,MCF7@0,NHEK@0,NHLF@0.00267,SKNSHRA@0.0071125, 0 0 0 0 ENSG00000245776.1 ENST00000500478.1 chr16:25078258-25080246 2 1855 131 intergenic 3.50 0 1,1,1 1 0,0,0 0 0 0 7.27870619946092 0 0 7.34824797843666 0 0 0 1 chimp,human,macaque,orangutan, lincRNA lincRNA A549@0.344804,AG04450@0.424318,BJ@0.407114,GM12878@0.576906,H1HESC@0.53653,HELAS3@0.199369,HEPG2@0.27618,HMEC@0.035279,HSMM@0.279073,HUVEC@0.193876,K562@0.621237,MCF7@0.45258,NHEK@0.183257,NHLF@0.362236,SKNSHRA@0.613803, 0 0 0 0 ENSG00000231876.1 ENST00000452511.1 chr16:26329467-26334302 2 893 3940 intergenic -0.58 0 0,0,0 0 0,0,0 39.2228443449048 17.0532994923858 0 52.4199328107503 40.8624365482234 30.08 54.006718924972 42.0786802030457 33.262 0 0 cat,chimp,cow,dog,elephant,guinea_pig,horse,human,macaque,marmoset,mouse,orangutan,panda,rat, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000231876.1 ENST00000417476.1 chr16:26329467-26345749 3 451 15827 intergenic -1.52 0 0,0,0 0 0,0,0 108.727272727273 7.46534403234978 0 103.793791574279 11.890377203513 30.08 106.935698447894 12.5406583686106 33.262 0 0 cat,chimp,cow,elephant,guinea_pig,horse,human,macaque,marmoset,orangutan,panda,pig,platypus,rat, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000231876.1 ENST00000432973.1 chr16:26333549-26345711 3 391 11767 intergenic 1.75 0 0,0,0 0 0,0,0 59.3606138107417 4.3310954363899 79.006 59.8542199488491 2.31078439704258 111.868 64.7979539641944 2.7781932523158 119.14 0 0 chimp,cow,elephant,horse,human,macaque,marmoset,orangutan,panda, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000236481.1 ENST00000443373.1 chr16:26596076-26606134 2 292 9764 intergenic -1.11 1 0,0,1 0 0,0,0 0 4.01116345759934 0 0 2.26823023351086 0 0 3.42748873412536 0 0 0 human, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0.019798,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000234186.2 ENST00000505035.1 chr16:27078028-27080486 1 2458 0 intergenic 9.40 1 0,0,0 0 0,1,1 4.80960130187144 0 0 26.953620829943 0 0 26.7253864930838 0 0 0 0 chimp,dog,elephant,horse,human,macaque,marmoset,orangutan,panda,pig, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0.0071385,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0.018949,NHEK@0,NHLF@0,SKNSHRA@0.001226, 0 0 0 0 ENSG00000234186.2 ENST00000418886.1 chr16:27078219-27080486 1 2267 0 intergenic 8.82 1 0,0,0 0 0,1,1 5.2148213498015 0 0 23.7044552271725 0 12.168 23.2126157917953 0 12.707 0 0 chimp,dog,elephant,guinea_pig,horse,human,macaque,marmoset,orangutan,panda,pig,rat, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0.0071385,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0.018949,NHEK@0,NHLF@0,SKNSHRA@0.001226, 0 0 0 0 ENSG00000245888.1 ENST00000499939.1 chr16:27280190-27283292 2 2587 513 intergenic 2.98 0 0,1,1 1 0,0,0 0 0 0 1.08426749130267 0 6.228 2.13451874758407 0 6.32 0 1 chimp,human,macaque,orangutan, lincRNA lincRNA A549@0.173559,AG04450@0.0489645,BJ@0.044836,GM12878@0.361579,H1HESC@0.04058,HELAS3@0.412704,HEPG2@0.293678,HMEC@0.012652,HSMM@0.0205475,HUVEC@0.01953,K562@0.368992,MCF7@0.149662,NHEK@0.037664,NHLF@0.0089435,SKNSHRA@0.261135, 0 0 0 0 ENSG00000246465.1 ENST00000501520.1 chr16:28296206-28303385 2 2479 4698 intergenic 3.64 0 0,0,1 1 0,0,0 0 4.96381438910175 228.379 2.44413069786204 0 236.389 3.33198870512303 0 235.449 1 1 chimp,human,macaque,marmoset,orangutan, lincRNA processed_transcript A549@0.145162,AG04450@0.0081115,BJ@0.001951,GM12878@0.045246,H1HESC@1.74826,HELAS3@0.992138,HEPG2@0.219866,HMEC@0.242345,HSMM@0.030602,HUVEC@0.005635,K562@0.003296,MCF7@1.20446,NHEK@0.00212367,NHLF@0.0023505,SKNSHRA@0.544345, 0 0 0 0 ENSG00000251417.1 ENST00000507031.1 chr16:28814097-28829149 2 1928 13122 intergenic -3.32 0 0,0,0 0 0,0,0 0 0 0 0 6.85992988873647 0 2.64678423236515 31.1105776558451 275.711 0 1 chimp,human,macaque,orangutan, lincRNA lincRNA A549@0.368807,AG04450@0.275256,BJ@0.262896,GM12878@0.202613,H1HESC@0.368495,HELAS3@0.959477,HEPG2@1.31599,HMEC@0.368233,HSMM@0.473001,HUVEC@0.565375,K562@0.152338,MCF7@0.24547,NHEK@0.116941,NHLF@0.493894,SKNSHRA@0.7305, 0 0 0 0 ENSG00000245192.1 ENST00000499485.1 chr16:28897204-28936455 3 1172 38075 exonic 0.63 0 0,0,1 0 0,0,0 13.9334470989761 36.9471043992121 0 2.8259385665529 52.4349835850295 0 12.4675767918089 59.4481680892974 0 0 1 chimp,human,marmoset, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0.004035,H1HESC@0,HELAS3@0.0266005,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0.001326,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000246710.1 ENST00000501801.1 chr16:29756600-29761818 3 2124 3090 intronic 9.98 0 0,1,0 0 0,0,0 0 2.77669902912621 25.048 0 15.8411003236246 107.35 0 16.6433656957929 118.072 0 1 chimp,human,orangutan, lincRNA lincRNA A549@0.002597,AG04450@0,BJ@0,GM12878@0.392585,H1HESC@2.59345,HELAS3@0.041446,HEPG2@0.023084,HMEC@0,HSMM@0,HUVEC@0.007371,K562@0.002563,MCF7@0.0575075,NHEK@0.00124133,NHLF@0,SKNSHRA@0.0064, 0 0 0 0 ENSG00000247735.1 ENST00000450909.2 chr16:29938657-29940791 4 1244 884 intergenic -0.50 0 0,0,1 0 0,0,0 0 0 25.53 5.39389067524116 0.270361990950226 2.7 5.46463022508039 0 2.72 1 1 chimp,human,macaque,marmoset,orangutan, lincRNA lincRNA A549@0.600599,AG04450@0.185885,BJ@0.097126,GM12878@0.232743,H1HESC@0.964647,HELAS3@0.520196,HEPG2@0.39644,HMEC@0.360904,HSMM@0.335178,HUVEC@0.108589,K562@0.595607,MCF7@1.79451,NHEK@0.170011,NHLF@0.548517,SKNSHRA@0.665716, 0 0 0 0 ENSG00000250616.1 ENST00000515455.1 chr16:30107751-30116777 2 2988 6036 exonic 5.30 0 0,1,1 0 0,0,0 16.5180722891566 0 152.258 22.2904953145917 0 262.847 21.764390896921 0 209.796 0 1 chimp,human,orangutan, lincRNA lincRNA A549@0.092644,AG04450@0.0952645,BJ@0.0959275,GM12878@0.161701,H1HESC@3.21681,HELAS3@0.220749,HEPG2@0.137922,HMEC@0.036975,HSMM@0.148586,HUVEC@0.0998355,K562@0.124404,MCF7@0.518579,NHEK@0.0360143,NHLF@0.0318675,SKNSHRA@0.0849135, 0 0 0 0 ENSG00000245600.1 ENST00000501009.1 chr16:30538239-30541977 2 1949 1787 exonic 3.85 0 0,1,0 0 0,0,0 38.7414058491534 0 166.329 54.9733196511031 5.33855623950755 346.025 44.6521292970754 17.3973139339675 231.575 0 0 chimp,cow,dog,elephant,horse,human,macaque,orangutan,panda, lincRNA lincRNA A549@0.053925,AG04450@0.0263915,BJ@0.0579145,GM12878@0.256557,H1HESC@0.082351,HELAS3@0.075615,HEPG2@0.082403,HMEC@0.010494,HSMM@0.0379055,HUVEC@0.0124625,K562@0.0909085,MCF7@0.329642,NHEK@0.00641433,NHLF@0.015946,SKNSHRA@0.121221, 0 0 0 0 ENSG00000235560.2 ENST00000457283.2 chr16:30546394-30548465 2 1122 947 intergenic -0.94 0 1,1,1 1 0,0,0 0 0 0 0 0 92.703 0 0 96.233 1 1 chimp,human,macaque,marmoset,orangutan, lincRNA lincRNA A549@0.730723,AG04450@0.395963,BJ@0.258868,GM12878@3.39846,H1HESC@2.90177,HELAS3@2.82424,HEPG2@2.5191,HMEC@0.597436,HSMM@0.196595,HUVEC@0.539197,K562@3.98468,MCF7@5.60875,NHEK@0.676641,NHLF@0.227909,SKNSHRA@1.77534, 0 0 0 0 ENSG00000239791.1 ENST00000486926.1 chr16:30583571-30594213 3 947 9691 exonic 7.52 0 0,1,0 1 0,0,0 33.6504751847941 2.65349293158601 174.413 2.96198521647307 3.47580229078526 156.038 20.7856388595565 6.18408832937777 151.443 0 0 chimp,human,macaque,marmoset,orangutan, antisense antisense A549@0.048323,AG04450@0,BJ@0.007499,GM12878@0.0710055,H1HESC@0.0267315,HELAS3@0.0907315,HEPG2@0.183387,HMEC@0.021364,HSMM@0.010866,HUVEC@0.0358835,K562@0.228797,MCF7@0.341037,NHEK@0.00434433,NHLF@0.003934,SKNSHRA@0.010353, 0 0 0 0 ENSG00000239791.1 ENST00000492040.1 chr16:30583576-30595181 2 1486 10117 exonic 7.52 0 1,1,1 1 0,0,0 46.8364737550471 2.84619946624493 172.828 9.05652759084791 3.60670159138084 156.038 75.9320323014805 6.20529801324503 151.443 0 0 cat,chimp,cow,dog,elephant,guinea_pig,horse,human,macaque,marmoset,mouse,orangutan,panda,rat, antisense antisense A549@0.048323,AG04450@0,BJ@0.007499,GM12878@0.0710055,H1HESC@0.0267315,HELAS3@0.0907315,HEPG2@0.183387,HMEC@0.021364,HSMM@0.010866,HUVEC@0.0358835,K562@0.228797,MCF7@0.341037,NHEK@0.00434433,NHLF@0.003934,SKNSHRA@0.010353, 0 0 0 0 ENSG00000249093.1 ENST00000503629.1 chr16:31052374-31054276 3 1414 484 intergenic 2.58 0 1,1,1 0 0,0,0 0 0 2.576 3.68599717114569 0 12.785 3.84087694483734 0 14.913 0 1 chimp,human,macaque,orangutan, lincRNA lincRNA A549@0.358593,AG04450@0.745968,BJ@1.00785,GM12878@0.416438,H1HESC@0.365278,HELAS3@0.319623,HEPG2@1.17985,HMEC@0.70825,HSMM@1.89839,HUVEC@2.37725,K562@0.240413,MCF7@1.49187,NHEK@0.850368,NHLF@0.483218,SKNSHRA@1.28131, 0 0 0 0 ENSG00000131797.7 ENST00000254109.5 chr16:31711911-31718758 9 1803 5028 intergenic 19.55 0 1,1,1 1 0,0,0 0 0 0 140.769828064337 28.381861575179 0 248.499722684415 44.0431583134447 0 0 0 chimp,guinea_pig,human,macaque,marmoset,orangutan, lincRNA processed_transcript A549@1.7509,AG04450@1.6531,BJ@1.0171,GM12878@9.93261,H1HESC@6.43938,HELAS3@11.7922,HEPG2@21.9543,HMEC@2.74745,HSMM@0.636132,HUVEC@0.230002,K562@4.38348,MCF7@7.19834,NHEK@4.39203,NHLF@0.405315,SKNSHRA@5.18161, 0 0 0 0 ENSG00000131797.7 ENST00000525610.1 chr16:31711916-31718743 7 1442 5373 intergenic 19.55 0 1,1,1 1 0,0,0 0 0 0 176.011095700416 26.5594639865997 0 310.710818307906 41.21514982319 0 0 0 chimp,cow,dog,elephant,guinea_pig,human,macaque,marmoset,orangutan,rabbit, lincRNA processed_transcript A549@1.7509,AG04450@1.6531,BJ@1.0171,GM12878@9.93261,H1HESC@6.43938,HELAS3@11.7922,HEPG2@21.9543,HMEC@2.74745,HSMM@0.636132,HUVEC@0.230002,K562@4.38348,MCF7@7.19834,NHEK@4.39203,NHLF@0.405315,SKNSHRA@5.18161, 0 0 0 0 ENSG00000131797.7 ENST00000532304.1 chr16:31711956-31718758 8 1563 5225 intergenic 19.55 0 1,1,1 1 0,0,0 0 0 0 162.38515674984 27.3117703349282 0 286.657069737684 42.3825837320574 0 0 0 chimp,dog,elephant,guinea_pig,human,macaque,marmoset,orangutan,panda,rabbit, lincRNA processed_transcript A549@1.7509,AG04450@1.6531,BJ@1.0171,GM12878@9.93261,H1HESC@6.43938,HELAS3@11.7922,HEPG2@21.9543,HMEC@2.74745,HSMM@0.636132,HUVEC@0.230002,K562@4.38348,MCF7@7.19834,NHEK@4.39203,NHLF@0.405315,SKNSHRA@5.18161, 0 0 0 0 ENSG00000131797.7 ENST00000411844.1 chr16:31715601-31717339 3 579 1155 intergenic 7.71 0 0,0,1 0 0,0,0 0 0 0 285.929188255613 13.1774891774892 57.827 510.54231433506 27.5125541125541 71.61 0 0 cat,chimp,cow,dog,elephant,guinea_pig,horse,human,macaque,marmoset,mouse,opossum,orangutan,panda,pig,rabbit,rat, lincRNA retained_intron A549@1.7509,AG04450@1.6531,BJ@1.0171,GM12878@9.93261,H1HESC@6.43938,HELAS3@11.7922,HEPG2@21.9543,HMEC@2.74745,HSMM@0.636132,HUVEC@0.230002,K562@4.38348,MCF7@7.19834,NHEK@4.39203,NHLF@0.405315,SKNSHRA@5.18161, 0 0 0 0 ENSG00000131797.7 ENST00000431761.1 chr16:31716991-31718672 4 719 956 intergenic 6.91 0 0,1,1 0 0,0,0 0 0 0 135.728789986092 133.797071129707 46.214 271.785813630042 220.729079497908 97.403 0 0 chimp,cow,dog,elephant,guinea_pig,horse,human,macaque,marmoset,mouse,orangutan,pig,rabbit, lincRNA processed_transcript A549@1.7509,AG04450@1.6531,BJ@1.0171,GM12878@9.93261,H1HESC@6.43938,HELAS3@11.7922,HEPG2@21.9543,HMEC@2.74745,HSMM@0.636132,HUVEC@0.230002,K562@4.38348,MCF7@7.19834,NHEK@4.39203,NHLF@0.405315,SKNSHRA@5.18161, 0 0 0 0 ENSG00000205456.6 ENST00000398664.3 chr16:32264040-32267240 2 2024 1174 intergenic 2.52 1 0,0,0 0 0,0,0 0 0 0 0 0 0 0 0 0 0 0 chimp,human,macaque,orangutan, lincRNA ambiguous_orf A549@0.743911,AG04450@0.013151,BJ@0.0666365,GM12878@0,H1HESC@0,HELAS3@0.0133215,HEPG2@0.004039,HMEC@0.063162,HSMM@0.195095,HUVEC@0.019944,K562@0.751142,MCF7@0.0129785,NHEK@0.0798363,NHLF@0.036383,SKNSHRA@3.07378, 0 0 0 0 ENSG00000205456.6 ENST00000380148.2 chr16:32264643-32267240 4 1876 715 intergenic 5.91 1 0,1,0 0 0,0,0 0 0 0 0 0 0 0 0 0 0 0 chimp,human,macaque,orangutan, lincRNA processed_transcript A549@0.743911,AG04450@0.013151,BJ@0.0666365,GM12878@0,H1HESC@0,HELAS3@0.0133215,HEPG2@0.004039,HMEC@0.063162,HSMM@0.195095,HUVEC@0.019944,K562@0.751142,MCF7@0.0129785,NHEK@0.0798363,NHLF@0.036383,SKNSHRA@3.07378, 0 0 0 0 ENSG00000205456.6 ENST00000354614.3 chr16:32264662-32265178 2 410 104 intergenic 2.52 0 0,1,0 0 0,0,0 0 0 0 0 0 0 0 0 0 0 1 chimp,human,macaque,orangutan, lincRNA processed_transcript A549@0.743911,AG04450@0.013151,BJ@0.0666365,GM12878@0,H1HESC@0,HELAS3@0.0133215,HEPG2@0.004039,HMEC@0.063162,HSMM@0.195095,HUVEC@0.019944,K562@0.751142,MCF7@0.0129785,NHEK@0.0798363,NHLF@0.036383,SKNSHRA@3.07378, 0 0 0 0 ENSG00000249231.1 ENST00000510238.1 chr16:52586008-52640847 4 948 53885 intergenic 2.22 0 0,0,1 0 0,0,0 68.7236286919831 34.1392595341932 144.43 106.585443037975 36.2100955739074 182.095 113.387130801688 37.4236429433052 184.034 0 0 chimp,cow,elephant,horse,human,macaque,marmoset,orangutan,pig,rabbit, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0.00847,H1HESC@0,HELAS3@0.008769,HEPG2@0.225698,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0.00268167,NHLF@0.0040535,SKNSHRA@0.0047665, 0 0 0 0 ENSG00000245694.2 ENST00000502066.1 chr16:54952798-54962708 5 638 9264 intergenic -1.85 0 1,1,1 1 0,0,0 115.844827586207 156.177245250432 113.122 61.0736677115988 158.590349740933 96.189 57.2382445141066 153.963514680484 94.111 0 0 cat,chimp,cow,dog,elephant,guinea_pig,horse,human,macaque,marmoset,mouse,orangutan,panda,rabbit,rat, lincRNA lincRNA A549@5.78617,AG04450@0.04647,BJ@1.44594,GM12878@2.48487,H1HESC@0.153506,HELAS3@4.90882,HEPG2@0.0217175,HMEC@0.887563,HSMM@2.19308,HUVEC@0.190876,K562@4.61205,MCF7@4.71474,NHEK@1.80002,NHLF@0.127096,SKNSHRA@1.42155, 0 0 0 0 ENSG00000245694.2 ENST00000501177.2 chr16:54952844-54962463 5 623 8988 intergenic -1.85 0 1,1,1 0 0,0,0 109.404494382022 160.973075211393 28.107 47.6581059390048 162.474632843792 70.809 45.5088282504013 158.174009790832 60.223 0 0 cat,chimp,cow,dog,elephant,guinea_pig,horse,human,macaque,marmoset,mouse,orangutan,panda,rabbit, lincRNA lincRNA A549@5.78617,AG04450@0.04647,BJ@1.44594,GM12878@2.48487,H1HESC@0.153506,HELAS3@4.90882,HEPG2@0.0217175,HMEC@0.887563,HSMM@2.19308,HUVEC@0.190876,K562@4.61205,MCF7@4.71474,NHEK@1.80002,NHLF@0.127096,SKNSHRA@1.42155, 0 0 0 0 ENSG00000246379.1 ENST00000501259.1 chr16:56126899-56225006 5 2673 95426 intergenic 0.91 0 0,1,0 0 0,0,0 66.6382341937897 23.2017898685893 290.101 51.9356528245417 26.6118563075053 461.758 42.9251777029555 30.7184834321883 344.174 0 0 chimp,elephant,human,macaque,marmoset,orangutan, lincRNA lincRNA A549@0,AG04450@0.006633,BJ@0.0742105,GM12878@0,H1HESC@0.200726,HELAS3@0.0036695,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0.0019945,K562@0.0019995,MCF7@0.0015015,NHEK@0,NHLF@0.0007285,SKNSHRA@0.123368, 0 0 0 0 ENSG00000245768.1 ENST00000500117.1 chr16:58783542-59142878 4 2292 357038 intergenic 1.07 0 0,0,0 0 0,0,0 32.575479930192 16.6227012250797 0 28.3407504363002 25.0399985435724 0 25.2002617801047 27.9242489594945 0 0 0 chimp,horse,human,marmoset,orangutan, lincRNA lincRNA A549@0.001469,AG04450@0,BJ@0.004189,GM12878@0,H1HESC@0,HELAS3@0.0118955,HEPG2@0.008404,HMEC@0,HSMM@0,HUVEC@0.0104675,K562@0,MCF7@0,NHEK@0.0100417,NHLF@0,SKNSHRA@0.0011715, 0 0 0 0 ENSG00000231589.1 ENST00000415422.1 chr16:62630276-62632353 2 556 1519 intergenic -2.27 0 0,0,0 0 0,0,0 0 0 0 74.6258992805755 17.9117840684661 0 68.4730215827338 15.4555628703094 0 0 0 cat,chimp,cow,dog,elephant,guinea_pig,horse,human,macaque,marmoset,mouse,opossum,orangutan,panda,pig,rabbit,rat, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0.0361975, 0 0 0 0 ENSG00000246898.1 ENST00000499966.1 chr16:66442427-66446038 2 2145 1464 intergenic -3.40 0 0,1,1 0 0,0,0 3.11794871794872 0 0 1.42657342657343 0 4.59 1.48251748251748 12.858606557377 4.69 1 1 chimp,human,macaque,marmoset,orangutan, lincRNA lincRNA A549@0.335217,AG04450@0.301408,BJ@0.026257,GM12878@0.175727,H1HESC@0.002305,HELAS3@0.84032,HEPG2@1.14323,HMEC@0.253649,HSMM@0.216985,HUVEC@0.382765,K562@0.0057195,MCF7@0.0131525,NHEK@0.473668,NHLF@0.0812265,SKNSHRA@0.93579, 0 0 0 0 ENSG00000246777.1 ENST00000501143.1 chr16:66785655-66788643 2 2892 94 exonic 8.25 0 0,1,1 0 0,0,0 4.8686030428769 0 140.751 10.1151452282158 0 170.595 11.7396265560166 0 162.424 1 1 chimp,human,macaque,marmoset,orangutan, lincRNA lincRNA A549@0.074572,AG04450@0.0897705,BJ@0.125169,GM12878@0.036735,H1HESC@0.0988225,HELAS3@0.15484,HEPG2@0.0392445,HMEC@0.048105,HSMM@0.0648865,HUVEC@0.080874,K562@0.0411045,MCF7@0.0387625,NHEK@0.027043,NHLF@0.115546,SKNSHRA@0.141364, 0 0 0 0 ENSG00000237718.1 ENST00000388909.4 chr16:67648284-67649245 2 520 439 intronic -1.37 0 0,0,0 0 0,0,0 0 0 0 9.19230769230769 0 1.736 11.9538461538462 0 1.813 0 0 chimp,human,macaque,marmoset,orangutan, antisense antisense A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0.008734,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 1 96 0 0 ENSG00000196696.5 ENST00000531894.1 chr16:70010200-70099851 26 4158 85443 encompassing 14.74 1 0,1,1 1 0,1,0 17.1755651755652 0.6254110927753 0 154.953342953343 2.87201994311997 0 177.824434824435 147.595484709104 0 0 0 human, processed_transcript processed_transcript A549@4.36273,AG04450@3.95418,BJ@5.02705,GM12878@3.92894,H1HESC@6.14998,HELAS3@4.70439,HEPG2@10.7814,HMEC@3.6609,HSMM@1.52113,HUVEC@7.60097,K562@4.88818,MCF7@11.4751,NHEK@3.57175,NHLF@3.41695,SKNSHRA@2.48585, 0 0 0 0 ENSG00000196696.5 ENST00000530079.1 chr16:70010255-70099756 25 2739 86714 encompassing 14.74 1 1,1,1 1 0,1,0 26.0737495436291 0.61624420508799 0 230.684921504199 2.81300597366054 14.063 266.29718875502 145.387722859054 14.063 0 0 human, processed_transcript processed_transcript A549@4.36273,AG04450@3.95418,BJ@5.02705,GM12878@3.92894,H1HESC@6.14998,HELAS3@4.70439,HEPG2@10.7814,HMEC@3.6609,HSMM@1.52113,HUVEC@7.60097,K562@4.88818,MCF7@11.4751,NHEK@3.57175,NHLF@3.41695,SKNSHRA@2.48585, 0 0 0 0 ENSG00000196696.5 ENST00000325845.7 chr16:70011775-70099851 26 2794 85232 encompassing 14.74 0 0,1,0 1 0,1,0 25.5604867573372 0.62695935798761 0 230.599856836077 2.87912990426131 0 264.636363636364 147.960871503661 0 0 0 human, processed_transcript processed_transcript A549@4.36273,AG04450@3.95418,BJ@5.02705,GM12878@3.92894,H1HESC@6.14998,HELAS3@4.70439,HEPG2@10.7814,HMEC@3.6609,HSMM@1.52113,HUVEC@7.60097,K562@4.88818,MCF7@11.4751,NHEK@3.57175,NHLF@3.41695,SKNSHRA@2.48585, 0 0 0 0 ENSG00000196696.5 ENST00000525331.1 chr16:70026923-70055833 8 875 28021 intergenic 10.82 0 0,1,0 0 0,1,0 33.92 0.149887584311766 6.16 182.178285714286 2.45647906926948 14.067 198.086857142857 3.20006423753613 15.579 0 0 chimp,cow,guinea_pig,human,mouse,orangutan,rabbit,rat, processed_transcript processed_transcript A549@4.36273,AG04450@3.95418,BJ@5.02705,GM12878@3.92894,H1HESC@6.14998,HELAS3@4.70439,HEPG2@10.7814,HMEC@3.6609,HSMM@1.52113,HUVEC@7.60097,K562@4.88818,MCF7@11.4751,NHEK@3.57175,NHLF@3.41695,SKNSHRA@2.48585, 0 0 0 0 ENSG00000196696.5 ENST00000526478.1 chr16:70029917-70052325 3 665 21739 intergenic 2.16 0 0,0,0 0 0,1,0 0 0 0 66.3924812030075 5.84088504531027 0 71.7729323308271 6.16422098532591 4.374 0 0 chimp,dog,horse,human,marmoset,orangutan, processed_transcript retained_intron A549@4.36273,AG04450@3.95418,BJ@5.02705,GM12878@3.92894,H1HESC@6.14998,HELAS3@4.70439,HEPG2@10.7814,HMEC@3.6609,HSMM@1.52113,HUVEC@7.60097,K562@4.88818,MCF7@11.4751,NHEK@3.57175,NHLF@3.41695,SKNSHRA@2.48585, 0 0 0 0 ENSG00000196696.5 ENST00000529089.1 chr16:70030067-70099721 18 1562 68058 intergenic 14.74 0 1,1,1 1 0,1,0 45.7208706786172 0.78516853272209 0 388.774647887324 3.57193864057128 20.717 448.944302176697 185.062725910253 20.756 0 0 cat,chimp,cow,dog,elephant,guinea_pig,horse,human,macaque,marmoset,mouse,opossum,panda,rabbit,rat, processed_transcript processed_transcript A549@4.36273,AG04450@3.95418,BJ@5.02705,GM12878@3.92894,H1HESC@6.14998,HELAS3@4.70439,HEPG2@10.7814,HMEC@3.6609,HSMM@1.52113,HUVEC@7.60097,K562@4.88818,MCF7@11.4751,NHEK@3.57175,NHLF@3.41695,SKNSHRA@2.48585, 0 0 0 0 ENSG00000196696.5 ENST00000334913.9 chr16:70044652-70099721 16 1424 53615 intergenic 0.65 0 0,1,1 1 0,1,0 50.1516853932584 0.996680033572694 0 426.872191011236 3.82258696260375 20.717 492.878511235955 234.20167863471 20.756 0 0 cat,chimp,cow,dog,elephant,guinea_pig,horse,human,macaque,marmoset,mouse,opossum,panda,rabbit,rat, processed_transcript processed_transcript A549@4.36273,AG04450@3.95418,BJ@5.02705,GM12878@3.92894,H1HESC@6.14998,HELAS3@4.70439,HEPG2@10.7814,HMEC@3.6609,HSMM@1.52113,HUVEC@7.60097,K562@4.88818,MCF7@11.4751,NHEK@3.57175,NHLF@3.41695,SKNSHRA@2.48585, 0 0 0 0 ENSG00000247228.1 ENST00000502126.1 chr16:70192860-70207351 5 2237 12246 exonic 7.90 0 0,0,0 0 0,0,0 0 1.03299036420056 0 2.31738936075101 2.23713865752082 115.433 2.50067054090299 3.16217540421362 125.43 1 1 chimp,human,macaque,marmoset,orangutan, lincRNA lincRNA A549@0.01505,AG04450@0.0205635,BJ@0.002523,GM12878@0.009774,H1HESC@0.0026235,HELAS3@0.0082735,HEPG2@0.017275,HMEC@0,HSMM@0,HUVEC@0.0047645,K562@0.02918,MCF7@0.004565,NHEK@0,NHLF@0.003623,SKNSHRA@0.0070855, 0 0 0 0 ENSG00000247324.1 ENST00000500612.1 chr16:71496181-71499844 2 2791 870 intergenic 3.20 0 0,1,0 1 0,0,0 0 0 0 1.97778573987818 0 11.28 1.99211752060193 0 13.842 1 1 chimp,human,macaque,marmoset,orangutan, lincRNA lincRNA A549@0.0614445,AG04450@0.034774,BJ@0.030194,GM12878@0.198228,H1HESC@0.053428,HELAS3@0.109352,HEPG2@0.072336,HMEC@0.005864,HSMM@0.013716,HUVEC@0.001741,K562@0.132353,MCF7@0.0159345,NHEK@0.026409,NHLF@0.0111155,SKNSHRA@0.142272, 0 0 0 0 ENSG00000187008.2 ENST00000335106.1 chr16:71963441-72033877 31 5162 65214 intergenic 4.72 0 0,0,0 0 0,1,1 38.5337078651685 0.540466770938756 0 121.189461449051 2.55176802527065 5.25 182.036226268888 3.1308921397246 7.569 0 0 chimp,elephant,horse,human,macaque,marmoset,orangutan, processed_transcript processed_transcript A549@0.004916,AG04450@0,BJ@0,GM12878@0.001799,H1HESC@0.0077625,HELAS3@0.0029445,HEPG2@0.0020685,HMEC@0,HSMM@0,HUVEC@0,K562@0.0078745,MCF7@0.002332,NHEK@0,NHLF@0,SKNSHRA@0.00191, 0 0 0 0 ENSG00000187008.2 ENST00000534738.1 chr16:71963441-72033877 30 5165 65213 intergenic 45.56 0 0,0,0 0 0,1,1 38.5113262342691 0.540475058653949 0 121.178121974831 2.54713017343168 5.25 186.04995159729 3.12583380614295 7.569 0 0 chimp,elephant,horse,human,macaque,marmoset,orangutan, processed_transcript processed_transcript A549@0.004916,AG04450@0,BJ@0,GM12878@0.001799,H1HESC@0.0077625,HELAS3@0.0029445,HEPG2@0.0020685,HMEC@0,HSMM@0,HUVEC@0,K562@0.0078745,MCF7@0.002332,NHEK@0,NHLF@0,SKNSHRA@0.00191, 0 0 0 0 ENSG00000247033.1 ENST00000499110.1 chr16:75142499-75144610 2 1664 445 exonic 4.25 0 0,1,0 0 0,0,0 166.941105769231 142.966292134831 13.464 103.664663461538 188.283146067416 2.1 109.682091346154 139.723595505618 2.1 0 0 cat,chimp,cow,dog,elephant,horse,human,marmoset,mouse,orangutan,rabbit,rat, lincRNA lincRNA A549@0.037807,AG04450@0.0183175,BJ@0.015271,GM12878@0,H1HESC@0.303063,HELAS3@0.220541,HEPG2@0.193653,HMEC@0,HSMM@0.024733,HUVEC@0.0035725,K562@0.004181,MCF7@0.287309,NHEK@0.00276767,NHLF@0.001158,SKNSHRA@0.0704255, 0 0 0 0 ENSG00000203472.2 ENST00000530512.2 chr16:75507023-75529305 3 2207 20071 exonic 2.47 0 1,1,1 0 0,0,0 0 23.0659159982064 0 2.71590394200272 24.9582482188232 0 2.09062075215224 23.6560709481341 0 0 1 human,macaque,marmoset,orangutan, lincRNA lincRNA A549@0,AG04450@0.002918,BJ@0.003238,GM12878@0,H1HESC@0.0053235,HELAS3@0,HEPG2@0.00512,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0.0073025, 0 0 0 0 ENSG00000250514.1 ENST00000512279.1 chr16:76668895-76692375 4 2194 21280 intergenic 0.62 0 0,1,0 0 0,0,0 61.5205104831358 8.46997180451128 0 62.4029170464904 10.6141447368421 0 61.8956244302644 17.944454887218 0 0 0 chimp,dog,horse,human,macaque,marmoset,orangutan, lincRNA lincRNA A549@0,AG04450@0,BJ@0.004404,GM12878@0.212373,H1HESC@0,HELAS3@0,HEPG2@0.0019795,HMEC@0,HSMM@0,HUVEC@0.0072895,K562@0.149036,MCF7@0,NHEK@0.010683,NHLF@0.005267,SKNSHRA@0, 0 0 0 0 ENSG00000245059.1 ENST00000501068.1 chr16:81110924-81112455 2 1075 454 intergenic 0.40 0 1,1,1 0 0,0,0 0 0 0 0 0 12.916 0 0 12.882 0 1 chimp,human,macaque,orangutan, lincRNA lincRNA A549@0.0819355,AG04450@0.011976,BJ@0.0510805,GM12878@0.059355,H1HESC@0.065882,HELAS3@0.0953425,HEPG2@0.060933,HMEC@0,HSMM@0.004233,HUVEC@0.0417045,K562@0.0434895,MCF7@0.125345,NHEK@0.001223,NHLF@0.014709,SKNSHRA@0.165562, 0 0 0 0 ENSG00000248782.2 ENST00000509267.2 chr16:85170756-85183039 3 1992 10287 intergenic 5.45 0 0,1,0 0 0,0,0 0 1.51015845241567 0 0 5.96374064353067 7.089 0 10.058228832507 7.285 0 1 human,macaque,marmoset,orangutan, lincRNA lincRNA A549@0,AG04450@0.004608,BJ@0.002468,GM12878@0,H1HESC@0.0024805,HELAS3@0.0792405,HEPG2@0.217562,HMEC@0,HSMM@0.0266745,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0.01366,SKNSHRA@0.0283505, 0 0 0 0 ENSG00000179219.5 ENST00000366314.4 chr16:85316564-85319569 2 1564 1439 intergenic 4.80 0 0,1,0 0 0,0,0 0 129.385684503127 0 0 12.2070882557331 0 0 14.2821403752606 0 0 0 chimp,human,marmoset,orangutan, lincRNA lincRNA A549@0.055605,AG04450@0.059648,BJ@0.103672,GM12878@0.0054305,H1HESC@0.138616,HELAS3@0.0772595,HEPG2@0.125907,HMEC@0.033991,HSMM@0.002628,HUVEC@0.190319,K562@0.0906195,MCF7@0.199718,NHEK@0.0849647,NHLF@0.097717,SKNSHRA@0.06255, 0 0 0 0 ENSG00000251607.1 ENST00000505771.1 chr16:85319914-85337002 6 1503 15575 intergenic 6.20 0 0,1,0 0 0,0,0 0 3.02279293739968 0 0 11.4884109149278 11.865 1.13173652694611 11.7612841091493 11.76 1 1 chimp,human,macaque,marmoset,orangutan, lincRNA lincRNA A549@0.10798,AG04450@0,BJ@0,GM12878@0,H1HESC@0.018747,HELAS3@0.057577,HEPG2@0.064842,HMEC@0,HSMM@0.0040905,HUVEC@0,K562@0,MCF7@0.0053895,NHEK@0.0284813,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000248463.1 ENST00000511252.1 chr16:86320033-86326993 3 2060 4896 intergenic 6.83 0 0,1,0 0 0,0,0 0 0 0 1.08349514563107 0 0 1.13155339805825 0 0 0 0 chimp,elephant,human,macaque,marmoset,orangutan, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0.002011,HELAS3@0.0253265,HEPG2@0.0211555,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000246979.1 ENST00000501311.1 chr16:86508135-86542466 4 3091 31234 intergenic 0.57 0 0,1,1 1 0,0,0 39.558071821417 7.45178331305628 116.108 74.4555160142349 13.3483383492348 176.667 76.9737948883856 17.0214509829033 179.213 0 1 chimp,human,macaque,orangutan, lincRNA lincRNA A549@0.0054485,AG04450@50.1144,BJ@2.15152,GM12878@0,H1HESC@0,HELAS3@3.51272,HEPG2@0.444413,HMEC@0,HSMM@0.0484485,HUVEC@0.004622,K562@0,MCF7@0.000797,NHEK@0.00189933,NHLF@10.8729,SKNSHRA@0.010956, 0 0 0 0 ENSG00000246979.1 ENST00000499142.1 chr16:86521324-86524485 2 2821 338 intergenic 5.35 0 0,1,1 0 0,0,0 0 0 0 0 0 5.307 0 0 5.787 0 1 chimp,human,marmoset,orangutan, lincRNA lincRNA A549@0.0054485,AG04450@50.1144,BJ@2.15152,GM12878@0,H1HESC@0,HELAS3@3.51272,HEPG2@0.444413,HMEC@0,HSMM@0.0484485,HUVEC@0.004622,K562@0,MCF7@0.000797,NHEK@0.00189933,NHLF@10.8729,SKNSHRA@0.010956, 0 0 0 0 ENSG00000246979.1 ENST00000499071.1 chr16:86521343-86542441 4 2575 18517 intergenic 8.64 0 1,1,1 1 0,0,0 0 11.9856888264838 119.684 21.3867961165049 19.6861262623535 190.893 19.8629126213592 23.5224388399849 193.925 1 1 chimp,human,macaque,marmoset,orangutan, lincRNA lincRNA A549@0.0054485,AG04450@50.1144,BJ@2.15152,GM12878@0,H1HESC@0,HELAS3@3.51272,HEPG2@0.444413,HMEC@0,HSMM@0.0484485,HUVEC@0.004622,K562@0,MCF7@0.000797,NHEK@0.00189933,NHLF@10.8729,SKNSHRA@0.010956, 0 0 0 0 ENSG00000232190.2 ENST00000430050.2 chr16:87091390-87097597 3 4080 2123 intergenic 4.91 0 0,0,0 0 0,0,0 8.25882352941177 60.8257183231277 0 12.1367647058824 35.8068770607631 7.308 10.6799019607843 27.493641073952 7.348 0 1 chimp,human,orangutan, lincRNA lincRNA A549@0,AG04450@0.00145,BJ@0,GM12878@0,H1HESC@0.0094615,HELAS3@0.0013,HEPG2@0.001336,HMEC@0,HSMM@0,HUVEC@0.116766,K562@0,MCF7@0.0321725,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000248168.1 ENST00000504545.1 chr16:88738213-88746008 4 4473 3316 exonic 12.58 0 0,1,0 0 0,0,0 5.12944332662643 13.3805790108565 0 10.2121618600492 25.8691194209891 0 16.7437961099933 25.1914957780458 0 1 1 chimp,human,macaque,marmoset,orangutan, lincRNA lincRNA A549@0.351093,AG04450@0.543273,BJ@0.454713,GM12878@0.634491,H1HESC@0.313275,HELAS3@0.957095,HEPG2@1.06384,HMEC@0.501772,HSMM@0.962622,HUVEC@0.693881,K562@0.566136,MCF7@0.734838,NHEK@0.347898,NHLF@1.31909,SKNSHRA@0.546129, 0 0 0 0 ENSG00000256982.1 ENST00000537498.1 chr16:89112580-89119373 2 2152 4639 intergenic 9.63 0 0,1,0 1 0,0,0 0 0 0 13.5655204460967 17.5794352231084 0 38.128717472119 26.5343824100022 2.84 0 1 chimp,human,orangutan, lincRNA lincRNA A549@0.049949,AG04450@0.005075,BJ@0,GM12878@0,H1HESC@0,HELAS3@0.249827,HEPG2@0.073449,HMEC@0.017108,HSMM@0.0212215,HUVEC@0,K562@0.033716,MCF7@0.502165,NHEK@0.054513,NHLF@0.015307,SKNSHRA@0.13987, 0 0 0 0 ENSG00000180422.2 ENST00000321214.2 chr16:89225628-89230083 4 2239 2210 intergenic 13.09 0 0,0,1 0 0,0,0 0 0 0 0 0 0 20.3689146940598 21.0303167420814 94.816 0 0 human,macaque,orangutan, lincRNA lincRNA A549@0.150823,AG04450@0.1481,BJ@0.0097765,GM12878@0.0017975,H1HESC@0.284671,HELAS3@0.067329,HEPG2@0.0331665,HMEC@0.001826,HSMM@0.0020325,HUVEC@0.016687,K562@0.0068885,MCF7@0.15096,NHEK@0.00117467,NHLF@0.0017205,SKNSHRA@0.108498, 0 0 0 0 ENSG00000245196.1 ENST00000499807.1 chr16:89584045-89588625 2 4146 432 intronic 0.08 0 0,1,1 0 0,0,0 0 0 0 0 0 0 0 0 0 0 1 chimp,human,macaque,orangutan, lincRNA lincRNA A549@0.001626,AG04450@0,BJ@0,GM12878@0.00141,H1HESC@0,HELAS3@0,HEPG2@0.001315,HMEC@0,HSMM@0,HUVEC@0.0012875,K562@0.0026285,MCF7@0.004353,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000255773.1 ENST00000539976.1 chr16:89978527-89981576 2 2462 585 intergenic 7.96 0 0,0,0 0 0,1,0 0 0 20.217 0 0 38.714 135.918765231519 0 45.956 0 1 human,macaque,orangutan, lincRNA lincRNA A549@2.12679,AG04450@0.763537,BJ@0.770583,GM12878@0.95329,H1HESC@1.51013,HELAS3@7.34601,HEPG2@3.82689,HMEC@0.619844,HSMM@1.30499,HUVEC@3.3479,K562@2.16609,MCF7@10.6727,NHEK@1.61173,NHLF@1.85241,SKNSHRA@1.17988, 0 0 0 0 ENSG00000223959.3 ENST00000431757.1 chr16:90038994-90046278 4 565 6713 intergenic 13.15 0 0,1,0 1 0,0,0 0 0 0 22.4530973451327 0.11961865037986 10.146 54.3787610619469 0.483688365857292 18.412 0 0 chimp,cow,elephant,human,marmoset,orangutan, antisense antisense A549@11.5978,AG04450@4.91464,BJ@5.38162,GM12878@11.3148,H1HESC@24.3736,HELAS3@21.1656,HEPG2@19.7482,HMEC@9.46584,HSMM@9.06526,HUVEC@28.2612,K562@17.1829,MCF7@57.1278,NHEK@13.2206,NHLF@6.71956,SKNSHRA@9.16536, 0 0 0 0 ENSG00000223959.3 ENST00000429663.1 chr16:90038994-90048294 4 454 8840 intergenic 10.03 0 0,1,1 1 0,0,0 15.1982378854626 0 0 60.0594713656388 0.448642533936652 10.146 163.20704845815 2.51515837104072 18.412 0 0 chimp,cow,dog,elephant,horse,human,marmoset,mouse,orangutan, antisense antisense A549@11.5978,AG04450@4.91464,BJ@5.38162,GM12878@11.3148,H1HESC@24.3736,HELAS3@21.1656,HEPG2@19.7482,HMEC@9.46584,HSMM@9.06526,HUVEC@28.2612,K562@17.1829,MCF7@57.1278,NHEK@13.2206,NHLF@6.71956,SKNSHRA@9.16536, 0 0 0 0 ENSG00000223959.3 ENST00000418696.1 chr16:90038994-90063034 9 2956 21068 intergenic 13.70 1 1,1,1 1 0,0,0 12.0926928281461 4.73808619707613 0 41.5774695534506 7.7458230491741 10.146 161.598782138024 19.8473988988039 18.412 0 0 human,orangutan, antisense antisense A549@11.5978,AG04450@4.91464,BJ@5.38162,GM12878@11.3148,H1HESC@24.3736,HELAS3@21.1656,HEPG2@19.7482,HMEC@9.46584,HSMM@9.06526,HUVEC@28.2612,K562@17.1829,MCF7@57.1278,NHEK@13.2206,NHLF@6.71956,SKNSHRA@9.16536, 0 0 0 0 ENSG00000223959.3 ENST00000450026.1 chr16:90038997-90044363 2 492 4872 intergenic 14.52 0 0,1,1 1 0,0,0 0 0 0 13.5853658536585 0 10.151 36.8861788617886 0.22824302134647 18.392 0 0 chimp,cow,dog,elephant,human,macaque,marmoset,orangutan, antisense retained_intron A549@11.5978,AG04450@4.91464,BJ@5.38162,GM12878@11.3148,H1HESC@24.3736,HELAS3@21.1656,HEPG2@19.7482,HMEC@9.46584,HSMM@9.06526,HUVEC@28.2612,K562@17.1829,MCF7@57.1278,NHEK@13.2206,NHLF@6.71956,SKNSHRA@9.16536, 0 0 0 0 ENSG00000223959.3 ENST00000436447.1 chr16:90039001-90063031 10 2993 21019 intergenic 17.61 1 1,1,1 1 0,0,0 11.943200801871 4.74913173795138 0 43.0601403274307 7.39706931823588 11.327 163.899097895089 19.1907797706837 19.644 0 0 human,orangutan, antisense antisense A549@11.5978,AG04450@4.91464,BJ@5.38162,GM12878@11.3148,H1HESC@24.3736,HELAS3@21.1656,HEPG2@19.7482,HMEC@9.46584,HSMM@9.06526,HUVEC@28.2612,K562@17.1829,MCF7@57.1278,NHEK@13.2206,NHLF@6.71956,SKNSHRA@9.16536, 0 0 0 0 ENSG00000223959.3 ENST00000457926.1 chr16:90039001-90063031 10 2909 21103 intergenic 17.61 1 1,1,1 1 0,0,0 12.2880715022344 4.73022792967824 0 43.6847713991062 7.43870539733687 11.327 167.887246476452 19.199924181396 19.644 0 0 human,macaque,orangutan,rabbit, antisense antisense A549@11.5978,AG04450@4.91464,BJ@5.38162,GM12878@11.3148,H1HESC@24.3736,HELAS3@21.1656,HEPG2@19.7482,HMEC@9.46584,HSMM@9.06526,HUVEC@28.2612,K562@17.1829,MCF7@57.1278,NHEK@13.2206,NHLF@6.71956,SKNSHRA@9.16536, 0 0 0 0 ENSG00000223959.3 ENST00000423742.1 chr16:90039002-90044925 2 1010 4911 intergenic 18.98 0 0,1,0 1 0,0,0 0 0 0 5.16237623762376 0 11.621 16.4188118811881 0.226430462227652 19.957 0 0 chimp,cow,guinea_pig,human,macaque,orangutan, antisense retained_intron A549@11.5978,AG04450@4.91464,BJ@5.38162,GM12878@11.3148,H1HESC@24.3736,HELAS3@21.1656,HEPG2@19.7482,HMEC@9.46584,HSMM@9.06526,HUVEC@28.2612,K562@17.1829,MCF7@57.1278,NHEK@13.2206,NHLF@6.71956,SKNSHRA@9.16536, 0 0 0 0 ENSG00000223959.3 ENST00000437774.1 chr16:90039025-90063031 11 3123 20863 intergenic 11.41 1 1,1,1 1 0,0,0 21.6535382644893 3.2258064516129 0 56.3272494396414 5.02142549010209 13.973 176.218059558117 16.2692326127594 21.363 0 0 human,orangutan, antisense antisense A549@11.5978,AG04450@4.91464,BJ@5.38162,GM12878@11.3148,H1HESC@24.3736,HELAS3@21.1656,HEPG2@19.7482,HMEC@9.46584,HSMM@9.06526,HUVEC@28.2612,K562@17.1829,MCF7@57.1278,NHEK@13.2206,NHLF@6.71956,SKNSHRA@9.16536, 0 0 0 0 ENSG00000223959.3 ENST00000421164.1 chr16:90039056-90051107 6 1700 10341 intergenic 4.21 0 1,1,1 1 0,0,0 9.06470588235294 0.0889662508461464 0 23.3876470588235 0.263804274248138 8.873 76.6664705882353 0.925925925925926 14.409 0 0 chimp,human,macaque,marmoset,orangutan, antisense antisense A549@11.5978,AG04450@4.91464,BJ@5.38162,GM12878@11.3148,H1HESC@24.3736,HELAS3@21.1656,HEPG2@19.7482,HMEC@9.46584,HSMM@9.06526,HUVEC@28.2612,K562@17.1829,MCF7@57.1278,NHEK@13.2206,NHLF@6.71956,SKNSHRA@9.16536, 0 0 0 0 ENSG00000223959.3 ENST00000421780.1 chr16:90044102-90051109 4 522 6479 intergenic -4.06 0 0,0,1 0 0,0,0 29.5210727969349 0.141997221793487 0 64.7873563218391 1.37953387868498 0 217.900383141762 3.75397437876215 0 0 0 chimp,cow,elephant,guinea_pig,horse,human,macaque,marmoset,mouse,orangutan,rabbit,rat, antisense antisense A549@11.5978,AG04450@4.91464,BJ@5.38162,GM12878@11.3148,H1HESC@24.3736,HELAS3@21.1656,HEPG2@19.7482,HMEC@9.46584,HSMM@9.06526,HUVEC@28.2612,K562@17.1829,MCF7@57.1278,NHEK@13.2206,NHLF@6.71956,SKNSHRA@9.16536, 0 0 0 0 ENSG00000223959.3 ENST00000423684.1 chr16:90044102-90051109 5 590 6409 intergenic -4.06 0 0,0,1 0 0,0,0 26.1186440677966 0.143548135434545 0 67.3881355932203 0.425651427679825 0 214.101694915254 1.77141519737869 0 0 0 chimp,cow,elephant,horse,human,macaque,marmoset,orangutan,rabbit,rat, antisense antisense A549@11.5978,AG04450@4.91464,BJ@5.38162,GM12878@11.3148,H1HESC@24.3736,HELAS3@21.1656,HEPG2@19.7482,HMEC@9.46584,HSMM@9.06526,HUVEC@28.2612,K562@17.1829,MCF7@57.1278,NHEK@13.2206,NHLF@6.71956,SKNSHRA@9.16536, 0 0 0 0 ENSG00000223959.3 ENST00000388970.3 chr16:90044102-90066961 12 1454 21383 intergenic 9.13 0 0,0,1 0 0,0,0 46.5089408528198 3.55890193144086 0 153.830811554333 9.15830332507132 0 355.290921595598 32.7503624374503 0 0 0 cow,elephant,horse,human,macaque,marmoset,mouse,orangutan,panda,rabbit, antisense antisense A549@11.5978,AG04450@4.91464,BJ@5.38162,GM12878@11.3148,H1HESC@24.3736,HELAS3@21.1656,HEPG2@19.7482,HMEC@9.46584,HSMM@9.06526,HUVEC@28.2612,K562@17.1829,MCF7@57.1278,NHEK@13.2206,NHLF@6.71956,SKNSHRA@9.16536, 0 0 0 0 ENSG00000223959.3 ENST00000458301.1 chr16:90046653-90063031 5 2293 14077 intergenic 2.61 1 0,1,1 0 0,0,0 6.21892716964675 8.61746110676991 0 23.2045355429568 15.6339418910279 0 152.584823375491 36.1854798607658 3.757 0 0 human,macaque,orangutan,rabbit, antisense antisense A549@11.5978,AG04450@4.91464,BJ@5.38162,GM12878@11.3148,H1HESC@24.3736,HELAS3@21.1656,HEPG2@19.7482,HMEC@9.46584,HSMM@9.06526,HUVEC@28.2612,K562@17.1829,MCF7@57.1278,NHEK@13.2206,NHLF@6.71956,SKNSHRA@9.16536, 0 0 0 0 ENSG00000223959.3 ENST00000355531.3 chr16:90054904-90066961 7 1322 10723 intergenic 9.13 0 0,0,1 0 0,0,0 58.0075642965204 3.04271192763219 0 164.872163388805 12.6522428424881 0 354.21860816944 41.450620162268 0 0 0 cow,elephant,guinea_pig,horse,human,macaque,marmoset,mouse,orangutan,rabbit,rat, antisense retained_intron A549@11.5978,AG04450@4.91464,BJ@5.38162,GM12878@11.3148,H1HESC@24.3736,HELAS3@21.1656,HEPG2@19.7482,HMEC@9.46584,HSMM@9.06526,HUVEC@28.2612,K562@17.1829,MCF7@57.1278,NHEK@13.2206,NHLF@6.71956,SKNSHRA@9.16536, 0 0 0 0 ENSG00000223959.3 ENST00000427658.1 chr16:90056740-90063018 4 2754 3518 intergenic 10.74 1 0,0,1 0 0,0,0 7.3841684822077 6.58982376350199 0 32.0537400145243 12.0622512791359 0 131.619462599855 21.1654349061967 0 0 1 chimp,human,macaque,orangutan, antisense retained_intron A549@11.5978,AG04450@4.91464,BJ@5.38162,GM12878@11.3148,H1HESC@24.3736,HELAS3@21.1656,HEPG2@19.7482,HMEC@9.46584,HSMM@9.06526,HUVEC@28.2612,K562@17.1829,MCF7@57.1278,NHEK@13.2206,NHLF@6.71956,SKNSHRA@9.16536, 0 0 0 0 ENSG00000223959.3 ENST00000454997.1 chr16:90065014-90068569 3 3324 227 intergenic 61.71 0 0,0,1 0 0,0,0 2.647412755716 0 0 26.1774969915764 186.528634361233 0 76.3405535499398 288.814977973568 0 0 0 human,macaque,marmoset,orangutan, antisense antisense A549@11.5978,AG04450@4.91464,BJ@5.38162,GM12878@11.3148,H1HESC@24.3736,HELAS3@21.1656,HEPG2@19.7482,HMEC@9.46584,HSMM@9.06526,HUVEC@28.2612,K562@17.1829,MCF7@57.1278,NHEK@13.2206,NHLF@6.71956,SKNSHRA@9.16536, 0 0 0 0 ENSG00000240468.1 ENST00000477499.1 chr17:33615-37038 2 785 2636 intergenic 0.50 1 0,0,0 0 0,0,0 4.29936305732484 20.0588012139605 0 5.17070063694268 18.3175265553869 2.232 9.37070063694268 29.0789074355083 3.468 0 0 cat,chimp,cow,elephant,horse,human,macaque,marmoset,orangutan,panda, lincRNA lincRNA A549@0.0397105,AG04450@0.004097,BJ@0,GM12878@0.0025615,H1HESC@0.005272,HELAS3@0,HEPG2@0.0327165,HMEC@0,HSMM@0,HUVEC@0.0161395,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0.0432985, 0 0 0 0 ENSG00000241525.1 ENST00000466740.1 chr17:254332-263814 3 379 9099 exonic 4.08 0 0,0,0 0 0,0,0 0 0 0 53.4749340369393 8.51093526761183 6.322 92.9604221635884 8.74590614353226 6.504 0 0 cat,chimp,cow,dog,elephant,guinea_pig,horse,human,macaque,marmoset,mouse,orangutan,panda,platypus,rat, antisense antisense A549@0,AG04450@0.0168825,BJ@0,GM12878@0.485515,H1HESC@0.0388665,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0.006365,K562@0,MCF7@0.026912,NHEK@0,NHLF@0,SKNSHRA@0.0118785, 0 0 0 0 ENSG00000231784.3 ENST00000536214.1 chr17:655900-658576 1 2676 0 intergenic 23.90 0 0,0,0 0 0,0,0 0 0 0 36.7462630792227 0 27.32 42.3527653213752 0 27.672 0 1 chimp,human,macaque,orangutan, processed_transcript processed_transcript A549@0.576357,AG04450@0.126431,BJ@0.122461,GM12878@0.304419,H1HESC@0.123122,HELAS3@0.267503,HEPG2@0.179626,HMEC@0.120835,HSMM@0.170662,HUVEC@0.233119,K562@0.285718,MCF7@0.479125,NHEK@0.142845,NHLF@0.0929905,SKNSHRA@0.322295, 0 0 0 0 ENSG00000231784.3 ENST00000449830.1 chr17:655907-658128 2 838 1381 intergenic 5.68 0 0,0,1 0 0,0,0 0 0 0 33.1109785202864 51.1122375090514 27.32 38.5990453460621 58.6459087617668 27.672 0 0 cat,chimp,cow,dog,elephant,horse,human,macaque,marmoset,orangutan,panda, processed_transcript processed_transcript A549@0.576357,AG04450@0.126431,BJ@0.122461,GM12878@0.304419,H1HESC@0.123122,HELAS3@0.267503,HEPG2@0.179626,HMEC@0.120835,HSMM@0.170662,HUVEC@0.233119,K562@0.285718,MCF7@0.479125,NHEK@0.142845,NHLF@0.0929905,SKNSHRA@0.322295, 0 0 0 0 ENSG00000235361.1 ENST00000438344.1 chr17:1085187-1088380 3 232 2957 intronic -1.24 0 0,0,0 0 0,0,0 19.7844827586207 6.62292864389584 31.611 46.7413793103448 26.8238079134258 50.051 25.1939655172414 31.4599256002705 49.612 0 0 chimp,horse,human,marmoset,orangutan, antisense antisense A549@0,AG04450@0.0137215,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000236618.1 ENST00000425081.1 chr17:1420225-1421389 2 539 623 exonic -0.80 0 1,1,1 1 0,0,0 115.408163265306 0 15.535 144.78293135436 0 49.9 134.805194805195 0 57.106 0 0 chimp,cow,dog,elephant,guinea_pig,human,macaque,marmoset,orangutan,panda,rat, antisense antisense A549@16.5758,AG04450@5.27405,BJ@3.65731,GM12878@4.9139,H1HESC@9.82158,HELAS3@11.4349,HEPG2@6.4834,HMEC@5.37372,HSMM@6.92244,HUVEC@4.51356,K562@5.8682,MCF7@8.29371,NHEK@4.27165,NHLF@3.93938,SKNSHRA@12.3545, 0 0 0 0 ENSG00000186594.5 ENST00000334146.3 chr17:1614805-1619504 4 1361 3332 intergenic 3.80 0 1,1,1 1 0,0,0 124.457751653196 145.522208883553 64.492 151.126377663483 218.779711884754 171.083 145.673769287289 194.112244897959 148.015 0 0 cat,chimp,cow,dog,elephant,guinea_pig,horse,human,marmoset,orangutan,panda,rabbit, lincRNA processed_transcript A549@5.85848,AG04450@8.84363,BJ@8.1081,GM12878@0.389285,H1HESC@0.0914515,HELAS3@3.07395,HEPG2@2.13476,HMEC@2.4722,HSMM@10.5469,HUVEC@2.79681,K562@0.795412,MCF7@2.16043,NHEK@6.16106,NHLF@9.76766,SKNSHRA@2.13968, 0 0 0 0 ENSG00000228133.1 ENST00000425277.1 chr17:1921177-1924000 2 1745 1076 intronic -2.17 1 0,0,1 0 0,0,0 65.345558739255 21.2342007434944 55.928 143.110028653295 14.953531598513 145.942 140.987965616046 16.5390334572491 160.957 0 0 cat,chimp,cow,dog,horse,human,macaque,mouse,orangutan,panda,pig, antisense antisense A549@0.0062125,AG04450@0,BJ@0,GM12878@0.026771,H1HESC@0.016659,HELAS3@0.040618,HEPG2@0.208865,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0.00297267,NHLF@0.00465,SKNSHRA@0.002602, 0 0 0 0 ENSG00000236838.1 ENST00000433167.1 chr17:2116991-2117922 2 616 313 intronic -2.23 0 0,1,1 0 0,0,0 195.589285714286 337.626198083067 314.25 355.472402597403 393.488817891374 424.285 327.951298701299 375.182108626198 369.856 0 0 cat,chimp,cow,dog,elephant,guinea_pig,horse,human,macaque,marmoset,mouse,orangutan,panda,pig,rabbit,rat, antisense antisense A549@0.0070245,AG04450@0.217943,BJ@0.059508,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0.036168,HUVEC@0.048759,K562@0,MCF7@0,NHEK@0.0115907,NHLF@0.0847555,SKNSHRA@0.0293955, 0 0 0 0 ENSG00000236457.1 ENST00000413674.1 chr17:2118776-2119309 2 321 210 intronic -3.47 0 1,1,1 1 0,0,0 611.890965732087 583.290476190476 30.194 724.127725856698 614.5 89.044 757.669781931464 640.414285714286 64.34 0 0 cat,chimp,cow,dog,elephant,guinea_pig,horse,human,macaque,marmoset,mouse,opossum,orangutan,panda,pig,platypus,rabbit, sense_intronic sense_intronic A549@0.0469515,AG04450@0.0198005,BJ@0,GM12878@0,H1HESC@0,HELAS3@0.0134435,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0.0103,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0.0292565, 0 0 0 0 ENSG00000225084.1 ENST00000414776.1 chr17:2135974-2136904 2 708 220 intronic -4.90 1 0,0,1 0 0,0,0 131.966101694915 0 140.845 288.358757062147 9.77727272727273 243.63 241.584745762712 0 257.089 0 0 cat,chimp,cow,dog,elephant,guinea_pig,horse,human,macaque,marmoset,mouse,orangutan,panda,pig,rabbit,rat, antisense antisense A549@0,AG04450@0.0063135,BJ@0,GM12878@0.0056785,H1HESC@0,HELAS3@0.029904,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000247061.1 ENST00000500520.1 chr17:2574352-2577029 2 883 1792 intronic -5.76 0 0,0,0 0 0,0,0 0 16.171875 124.08 8.42582106455266 39.3571428571429 152.834 14.9592298980747 47.64453125 167.266 1 1 chimp,human,macaque,marmoset,orangutan, lincRNA lincRNA A549@0,AG04450@0.005065,BJ@0.005564,GM12878@0.006609,H1HESC@0,HELAS3@0.005282,HEPG2@0.004917,HMEC@0,HSMM@0,HUVEC@0,K562@0.0055505,MCF7@0.002323,NHEK@0.00738633,NHLF@0,SKNSHRA@0.0051275, 0 0 0 0 ENSG00000229782.1 ENST00000416958.1 chr17:4400689-4402969 2 368 1910 intronic 0 0 0,0,1 0 0,0,0 218.054347826087 70.4424083769634 166.309 216.910326086957 158.758115183246 187.786 201.410326086957 134.992146596859 166.248 0 0 cat,chimp,cow,dog,elephant,guinea_pig,horse,human,macaque,marmoset,mouse,orangutan,pig,rabbit,rat, antisense antisense A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0.043009,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0.805809,K562@0,MCF7@0,NHEK@0.00712033,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000235085.1 ENST00000441700.1 chr17:4578674-4600129 3 384 21067 exonic -0.03 0 0,0,0 0 0,0,0 0 11.0151421654721 135.669 0 17.6814923814497 195.217 0 19.6290406797361 204.7 0 0 chimp,horse,human,macaque,marmoset,orangutan,rabbit, antisense antisense A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000244184.1 ENST00000497885.1 chr17:4607525-4608824 2 470 827 exonic 2.41 1 1,1,1 1 0,0,0 0 0 140.3 5.00425531914894 5.59492140266022 120.369 19.1553191489362 337.631197097944 102.639 0 0 chimp,cow,human,macaque,marmoset,mouse,orangutan,pig,rat, antisense antisense A549@0.860078,AG04450@0.10203,BJ@0.03094,GM12878@0.584877,H1HESC@0.664616,HELAS3@0.672874,HEPG2@0.713928,HMEC@0.182176,HSMM@0.169759,HUVEC@0.285795,K562@0.554094,MCF7@1.28688,NHEK@0.0937427,NHLF@0.168984,SKNSHRA@0.391829, 0 0 0 0 ENSG00000234203.1 ENST00000430920.1 chr17:4876146-4877976 2 437 1391 exonic 7.90 1 0,1,1 0 0,0,0 226.613272311213 120.942487419123 113.814 213.027459954233 181.484543493889 142.94 238.663615560641 173.280373831776 126.762 0 0 cat,chimp,cow,dog,elephant,guinea_pig,horse,human,macaque,marmoset,mouse,orangutan,panda,pig,platypus,rabbit,rat, antisense antisense A549@0.224469,AG04450@0.606073,BJ@0.312543,GM12878@0.216958,H1HESC@0.893513,HELAS3@2.31434,HEPG2@1.57196,HMEC@0.018654,HSMM@0.786751,HUVEC@0.14926,K562@0.05836,MCF7@0.941432,NHEK@0.0395723,NHLF@0.0573165,SKNSHRA@0.800832, 0 0 0 0 ENSG00000227495.1 ENST00000438266.1 chr17:4922509-4923388 2 581 296 exonic 4.88 1 0,1,1 0 0,1,0 51.5421686746988 197.168918918919 110.685 71.1480206540447 250.138513513514 138.698 64.9621342512909 244.337837837838 156.2 0 0 cat,chimp,cow,dog,guinea_pig,horse,human,macaque,marmoset,opossum,orangutan,pig,rabbit, antisense antisense A549@0.097809,AG04450@0.074236,BJ@0.025338,GM12878@0.42475,H1HESC@0.0120475,HELAS3@0.16123,HEPG2@0.038012,HMEC@0.028093,HSMM@0.021176,HUVEC@0.0310625,K562@0.0622715,MCF7@0.0767275,NHEK@0.0134373,NHLF@0.009929,SKNSHRA@0.271779, 0 0 0 0 ENSG00000234327.1 ENST00000413077.1 chr17:5015227-5017672 3 471 1970 exonic 0.28 0 1,1,1 1 0,0,0 0 0 0 0 0 2.04 66.9065817409766 2.69543147208122 3.674 0 0 cat,chimp,cow,dog,elephant,horse,human,macaque,marmoset,mouse,opossum,orangutan,panda,pig,platypus,rabbit,rat, antisense antisense A549@6.47469,AG04450@1.93746,BJ@2.11334,GM12878@13.6097,H1HESC@4.18588,HELAS3@12.8847,HEPG2@2.53944,HMEC@2.64337,HSMM@4.39371,HUVEC@2.5728,K562@14.7827,MCF7@2.72268,NHEK@1.62004,NHLF@2.40549,SKNSHRA@4.0058, 0 0 0 0 ENSG00000232607.1 ENST00000443997.1 chr17:6919137-6922949 3 767 3041 exonic 3.39 0 1,1,1 0 0,0,0 393.027379400261 264.202564945742 543.85 439.954367666232 292.437356132851 585.818 426.280312907431 244.296941795462 565.828 0 0 cat,chimp,cow,dog,guinea_pig,horse,human,macaque,marmoset,mouse,orangutan,panda,pig,rat, antisense antisense A549@0.102648,AG04450@0.01706,BJ@0.006395,GM12878@0.0165605,H1HESC@0.049402,HELAS3@0.0034465,HEPG2@0,HMEC@0.005318,HSMM@0.257474,HUVEC@0.078081,K562@0.027242,MCF7@0.503103,NHEK@0,NHLF@0.366276,SKNSHRA@0.401448, 0 0 0 0 ENSG00000233223.1 ENST00000415124.1 chr17:7485282-7487390 2 350 1756 exonic 0.02 0 1,1,1 1 0,0,0 71.4685714285714 4.10079726651481 5.94 73.4085714285714 20.0187927107061 7.081 88.0685714285714 20.3980637813212 8.13 0 0 cat,chimp,cow,dog,elephant,guinea_pig,horse,human,macaque,marmoset,mouse,orangutan,panda,pig,rabbit, antisense antisense A549@0.481051,AG04450@0.164442,BJ@0.507357,GM12878@0.145289,H1HESC@0.10152,HELAS3@0.745376,HEPG2@0.49266,HMEC@0.104692,HSMM@0.0906225,HUVEC@0.15318,K562@0.167375,MCF7@0.88892,NHEK@0.321385,NHLF@0.130223,SKNSHRA@0.296027, 0 0 0 0 ENSG00000233223.1 ENST00000417897.1 chr17:7485334-7487386 2 297 1753 exonic 1.41 0 1,1,1 1 0,0,0 84.2222222222222 4.10781517398745 5.94 86.5084175084175 20.0530519110097 7.081 103.784511784512 20.4329720479179 8.13 0 0 cat,chimp,cow,dog,elephant,guinea_pig,horse,human,macaque,mouse,orangutan,panda,pig,rabbit,rat, antisense antisense A549@0.481051,AG04450@0.164442,BJ@0.507357,GM12878@0.145289,H1HESC@0.10152,HELAS3@0.745376,HEPG2@0.49266,HMEC@0.104692,HSMM@0.0906225,HUVEC@0.15318,K562@0.167375,MCF7@0.88892,NHEK@0.321385,NHLF@0.130223,SKNSHRA@0.296027, 0 0 0 0 ENSG00000179859.6 ENST00000324348.6 chr17:7816658-7819589 2 2829 100 intergenic 52.50 0 1,1,1 1 0,0,0 79.4747260516083 17.35 22.393 81.2849063273241 32.54 76.284 80.9268292682927 43.24 81.191 0 0 chimp,human,macaque,orangutan, lincRNA processed_transcript A549@0.544762,AG04450@0.336309,BJ@0.742617,GM12878@0.746083,H1HESC@0.351892,HELAS3@3.27297,HEPG2@0.465953,HMEC@1.26185,HSMM@2.71889,HUVEC@0.310939,K562@0.815468,MCF7@0.37501,NHEK@1.13496,NHLF@0.640216,SKNSHRA@0.618148, 0 0 0 0 ENSG00000178977.3 ENST00000315707.3 chr17:8123960-8127361 3 2079 1318 intergenic 5.66 1 0,0,1 0 0,0,0 31.6075036075036 35.6722306525038 0 48.3843193843194 52.7230652503794 0 47.4963924963925 51.2071320182094 0 0 0 chimp,horse,human,macaque,orangutan, antisense antisense A549@0.148274,AG04450@0.211822,BJ@0.146025,GM12878@0.522303,H1HESC@0.182284,HELAS3@1.17178,HEPG2@0.369227,HMEC@0.057034,HSMM@0.159477,HUVEC@0.0977445,K562@0.165256,MCF7@0.136043,NHEK@0.0861157,NHLF@0.0816275,SKNSHRA@0.396477, 0 0 0 0 ENSG00000226871.1 ENST00000458568.1 chr17:8221406-8222030 2 535 87 exonic 1.51 0 0,0,1 0 0,0,0 192.231775700935 0 199.24 165.233644859813 48.9310344827586 253.386 179.657943925234 40.8850574712644 260.251 0 0 chimp,cow,dog,elephant,guinea_pig,horse,human,macaque,marmoset,orangutan,panda,rabbit,rat, antisense antisense A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0.055341,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000174083.11 ENST00000399376.3 chr17:8706041-8770994 21 3267 61646 intergenic 84.55 0 1,1,1 0 0,1,1 103.281910009183 1.629043246926 7.315 181.928986838078 3.50692664568666 258.73 200.43771043771 3.69508159491289 270.514 0 0 chimp,cow,dog,guinea_pig,horse,human,macaque,marmoset,mouse,orangutan,pig,rabbit, lincRNA lincRNA A549@0,AG04450@0,BJ@0.003533,GM12878@26.9596,H1HESC@0.35217,HELAS3@0,HEPG2@0.0048195,HMEC@0.014756,HSMM@0.0033865,HUVEC@0,K562@0.0008815,MCF7@0,NHEK@0.00923433,NHLF@0.002755,SKNSHRA@0.024276, 0 0 0 0 ENSG00000174083.11 ENST00000452122.1 chr17:8706041-8770994 20 3270 61645 intergenic 69.23 0 1,1,1 0 0,1,1 103.187155963303 1.6290696731284 7.315 182.196024464832 3.49931056857815 258.73 200.696024464832 3.68732257279585 270.514 0 0 chimp,cow,dog,guinea_pig,horse,human,macaque,marmoset,mouse,orangutan,pig,rabbit, lincRNA lincRNA A549@0,AG04450@0,BJ@0.003533,GM12878@26.9596,H1HESC@0.35217,HELAS3@0,HEPG2@0.0048195,HMEC@0.014756,HSMM@0.0033865,HUVEC@0,K562@0.0008815,MCF7@0,NHEK@0.00923433,NHLF@0.002755,SKNSHRA@0.024276, 0 0 0 0 ENSG00000174083.11 ENST00000311434.9 chr17:8706055-8770994 21 3017 61882 intergenic 184.90 0 1,1,1 0 0,1,1 114.899569108386 1.46873081025177 7.315 225.433211799801 2.82043243592644 258.73 246.629101756712 2.95058336834621 270.514 0 0 chimp,cow,dog,guinea_pig,horse,human,macaque,marmoset,mouse,orangutan,pig,rabbit, lincRNA lincRNA A549@0,AG04450@0,BJ@0.003533,GM12878@26.9596,H1HESC@0.35217,HELAS3@0,HEPG2@0.0048195,HMEC@0.014756,HSMM@0.0033865,HUVEC@0,K562@0.0008815,MCF7@0,NHEK@0.00923433,NHLF@0.002755,SKNSHRA@0.024276, 0 0 0 0 ENSG00000174083.11 ENST00000434064.2 chr17:8706591-8753111 19 2245 44239 intergenic 161.42 0 0,0,1 0 0,1,1 154.410690423163 2.05447681909627 0 298.343875278396 3.27360473790095 11.158 326.67126948775 3.44921901489636 11.36 0 0 chimp,cow,dog,elephant,guinea_pig,horse,human,macaque,marmoset,mouse,orangutan,pig,rabbit,rat, lincRNA lincRNA A549@0,AG04450@0,BJ@0.003533,GM12878@26.9596,H1HESC@0.35217,HELAS3@0,HEPG2@0.0048195,HMEC@0.014756,HSMM@0.0033865,HUVEC@0,K562@0.0008815,MCF7@0,NHEK@0.00923433,NHLF@0.002755,SKNSHRA@0.024276, 0 0 0 0 ENSG00000225751.1 ENST00000445617.1 chr17:9364561-9373331 3 486 8280 intronic -1.68 1 0,0,1 0 0,0,0 0 28.3684782608696 0 0 21.999154589372 0 0 22.4024154589372 0 0 0 chimp,horse,human,macaque,marmoset,orangutan, antisense antisense A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0.0099445,K562@0,MCF7@0,NHEK@0.0106207,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000249095.1 ENST00000510453.1 chr17:10286461-10527704 12 2560 238661 exonic 0.69 0 0,1,1 0 0,0,0 14.55 49.5936453798484 0 11.94375 61.0346768009855 0 13.63125 64.5412279341828 0 0 0 chimp,elephant,human,orangutan, lincRNA lincRNA A549@0.002281,AG04450@0.0018315,BJ@0.146356,GM12878@0.105034,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0.108926,HSMM@0.66552,HUVEC@0,K562@0,MCF7@0,NHEK@0.0728977,NHLF@0.006811,SKNSHRA@0.004613, 0 0 0 0 ENSG00000205351.2 ENST00000379770.2 chr17:10698230-10707354 2 1466 7656 intergenic 18.31 1 1,1,1 0 0,0,0 19.5395634379263 1.15504179728318 41.127 36.2667121418827 0.43730407523511 47.466 43.356070941337 0.47466039707419 47.781 0 0 chimp,cow,human,macaque,marmoset,orangutan,panda, lincRNA lincRNA A549@0.0091895,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0.0180835,NHEK@0.154335,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000254652.1 ENST00000528745.1 chr17:11464473-11467380 1 2907 0 intergenic 2.63 1 0,1,1 0 0,0,1 129.562091503268 0 32.82 122.69040247678 0 45.272 125.042999656003 0 44.112 0 0 cat,chimp,dog,horse,human,macaque,marmoset,orangutan,panda, lincRNA lincRNA A549@0,AG04450@0.0022175,BJ@0,GM12878@0.006034,H1HESC@0.66173,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0.0869133,NHLF@0,SKNSHRA@0.001563, 0 0 0 0 ENSG00000179136.1 ENST00000313495.1 chr17:12453286-12540504 4 2762 84450 intergenic 4.21 0 0,0,0 0 0,0,0 19.3399710354815 11.7665956187093 207.798 8.01194786386676 9.80786264061574 125.47 8.75633598841419 10.5880521018354 122.52 0 0 chimp,dog,horse,human,macaque,marmoset,orangutan,panda, lincRNA lincRNA A549@0.0075745,AG04450@0.091115,BJ@0.280791,GM12878@0.0041065,H1HESC@0.003,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0.0804505,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0.0160445,SKNSHRA@0, 0 0 0 0 ENSG00000227274.1 ENST00000445508.1 chr17:12575179-12609452 3 1140 33129 intronic 2.38 1 0,0,0 0 0,0,0 0 11.9738597603308 0 1.34210526315789 14.1700624830209 0 1.39473684210526 14.4505720063992 0 0 0 chimp,cow,dog,horse,human,macaque,marmoset,mouse,orangutan,pig,rabbit, antisense antisense A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000234634.1 ENST00000440522.1 chr17:13202501-13210077 5 480 7088 intergenic -6.21 0 0,0,0 0 0,0,0 0 6.80530474040632 0 8.36458333333333 4.31278216704289 1.095 8.31875 7.02948645598194 1.089 0 0 human,macaque,marmoset,orangutan, lincRNA lincRNA A549@0,AG04450@0,BJ@0.0050765,GM12878@0.009666,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000236088.1 ENST00000423323.1 chr17:13679951-13695867 2 2996 12918 intergenic -1.20 1 0,0,1 0 0,0,0 10.1975967957276 16.697244155442 0 0 19.5973060845332 0 2.16622162883845 18.9110543427775 0 0 0 chimp,human,macaque,orangutan, lincRNA lincRNA A549@0.048765,AG04450@0.169079,BJ@0.0487585,GM12878@0.008272,H1HESC@0.0793325,HELAS3@0.0342525,HEPG2@0.0868715,HMEC@0.001366,HSMM@0.067254,HUVEC@0.018958,K562@0.0084885,MCF7@0.048001,NHEK@0.0159437,NHLF@0.0292075,SKNSHRA@0.158463, 0 0 0 0 ENSG00000233852.1 ENST00000457609.1 chr17:13836037-13843911 3 402 7468 intergenic -0.99 0 0,0,0 0 0,0,0 0 0 0 0 0 0 0 0.251740760578468 0 0 0 chimp,cow,horse,human,macaque,marmoset,orangutan, lincRNA lincRNA A549@0.144402,AG04450@0.081239,BJ@0.0176685,GM12878@0.036741,H1HESC@0.0287435,HELAS3@0.005771,HEPG2@0.0372705,HMEC@0,HSMM@0,HUVEC@0,K562@0.0132215,MCF7@0.0597955,NHEK@0.0368603,NHLF@0.019164,SKNSHRA@0.0524195, 0 0 0 0 ENSG00000141028.4 ENST00000268714.3 chr17:13927802-13928981 3 642 533 intergenic 3.49 1 0,0,0 0 0,0,0 0 0 0 0 0 0 0 0 445.877 0 0 chimp,human,macaque,marmoset,orangutan, lincRNA lincRNA A549@0,AG04450@0.003475,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0.0071995,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000141028.4 ENST00000389360.3 chr17:13927813-13928991 3 765 409 intergenic 1.80 1 0,0,0 0 0,0,0 0 0 0 0 0 0 0 0 445.877 0 0 chimp,dog,elephant,horse,human,macaque,marmoset,orangutan, lincRNA lincRNA A549@0,AG04450@0.003475,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0.0071995,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000223385.1 ENST00000449363.1 chr17:13932609-13972775 3 1941 38221 intergenic 0.90 0 1,1,1 1 0,0,0 0 6.77713822244316 0 0 9.225608958426 45.172 0 10.7941969074593 52.428 0 0 human,orangutan, lincRNA processed_transcript A549@2.09583,AG04450@0.863711,BJ@0.870035,GM12878@5.50021,H1HESC@1.32785,HELAS3@2.93567,HEPG2@1.4,HMEC@0.478706,HSMM@0.891584,HUVEC@0.498165,K562@4.08678,MCF7@1.49022,NHEK@1.51378,NHLF@0.583043,SKNSHRA@2.04541, 0 0 0 0 ENSG00000231595.1 ENST00000458492.1 chr17:14113805-14121239 3 1534 5896 intergenic -0.21 1 0,0,1 0 0,0,0 7.34680573663625 0 0 9.98956975228162 3.92113297150611 0 10.8526727509778 4.81784260515604 0 0 0 chimp,cow,dog,guinea_pig,horse,human,marmoset,orangutan, antisense antisense A549@0.466811,AG04450@0.215279,BJ@0.17393,GM12878@0.387123,H1HESC@0.367903,HELAS3@0.456975,HEPG2@0.314874,HMEC@0.452464,HSMM@0.170338,HUVEC@0.180729,K562@0.430282,MCF7@0.276525,NHEK@0.285904,NHLF@0.0884405,SKNSHRA@0.350492, 0 0 0 0 ENSG00000245153.1 ENST00000500420.1 chr17:14198829-14200917 2 1883 203 intergenic 5.65 0 0,1,1 0 0,0,0 0 0 0 2.78491768454594 0 4.41 2.74455655868295 0 4.5 0 0 chimp,elephant,horse,human,marmoset,orangutan, lincRNA lincRNA A549@0.004606,AG04450@0.0310615,BJ@0.0268725,GM12878@0,H1HESC@0.0354755,HELAS3@0.002816,HEPG2@0.0541185,HMEC@0,HSMM@0.0231265,HUVEC@0,K562@0,MCF7@0.045456,NHEK@0.00759867,NHLF@0.151357,SKNSHRA@0, 0 0 0 0 ENSG00000230647.1 ENST00000436469.1 chr17:14277456-14324343 5 799 46080 intergenic -3.44 0 0,1,0 0 0,0,0 0 13.5419487847222 0 0 11.5518446180556 33.968 0 12.4016927083333 32.877 0 0 chimp,human,macaque,marmoset, lincRNA lincRNA A549@0.0210385,AG04450@0.0069395,BJ@0,GM12878@0,H1HESC@0.014785,HELAS3@1.0034,HEPG2@3.52027,HMEC@0,HSMM@0.018614,HUVEC@0.0066425,K562@0.00678,MCF7@0.0051145,NHEK@0.001642,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000226130.1 ENST00000455092.1 chr17:14629046-14633003 2 230 3725 intergenic -0.90 0 0,1,0 0 0,0,0 0 17.0813422818792 0 0 10.0727516778523 5.034 0 12.2765100671141 5.152 0 0 chimp,horse,human,macaque,marmoset,orangutan,rabbit, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0.130126,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000238212.1 ENST00000445035.1 chr17:14741279-14803871 3 624 61964 intergenic -1.96 1 0,0,1 0 0,0,0 0 13.4107223549158 0 0 11.2046672261313 0 0 12.8228810276935 0 0 0 chimp,human,macaque,marmoset,orangutan, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0.0173885,MCF7@0,NHEK@0.00420167,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000232058.1 ENST00000446671.1 chr17:14918122-14955593 2 974 36495 intergenic -1.07 1 0,0,1 0 0,0,0 0 9.79854774626661 0 0 11.2707220167146 0 0 12.7643786820112 0 0 0 chimp,elephant,guinea_pig,horse,human,macaque,marmoset,orangutan,pig,rabbit, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0.0125825,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000227767.1 ENST00000427552.1 chr17:14934292-14935274 3 764 214 intergenic -0.76 1 0,0,0 0 0,0,0 0 0 0 3.75392670157068 0 0 3.94240837696335 0 0 0 0 cat,chimp,horse,human,macaque,marmoset,orangutan,panda,rabbit, lincRNA ambiguous_orf A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000230971.1 ENST00000431343.1 chr17:15170778-15175607 2 1771 3056 intergenic -0.99 0 0,0,0 0 0,0,0 0 6.04712041884817 0 0 10.3102094240838 5.241 0 11.6053664921466 5.469 0 0 chimp,human,macaque,marmoset,orangutan, lincRNA lincRNA A549@0.0038045,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000237377.1 ENST00000453339.1 chr17:15179879-15182794 3 342 2569 intergenic -4.79 0 0,0,0 0 0,0,0 0 0 0 0 0 0 0 0 2.916 0 0 chimp,human,macaque,marmoset,orangutan, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000233002.1 ENST00000434017.1 chr17:15638337-15647105 4 742 8020 exonic -11.92 0 0,0,0 0 0,0,0 0 0 0 0 0.699501246882793 0 18.1509433962264 17.0796758104738 7.29 0 0 chimp,human,macaque,marmoset,orangutan, antisense antisense A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0.05093,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000233002.1 ENST00000433873.1 chr17:15641817-15647113 2 482 4812 exonic -12.69 0 0,0,1 0 0,0,0 0 0 0 0 1.16583541147132 0 17.0995850622407 13.319825436409 7.29 0 0 chimp,human,macaque,marmoset,orangutan, antisense antisense A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0.05093,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000233193.1 ENST00000433051.1 chr17:15664928-15667083 2 413 1740 intergenic -17.07 0 0,0,0 0 0,0,0 0 0 0 0 0 0 0 0 87.666 0 0 NA lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000237057.1 ENST00000418821.1 chr17:15709980-15720943 3 410 10549 intergenic 2.12 0 0,1,0 0 0,0,0 0 0 0 89.6048780487805 0.697506872689354 0 327.063414634146 5.2711157455683 0 0 0 chimp,cow,elephant,guinea_pig,human,macaque,marmoset,orangutan,rabbit, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0.011244,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000225436.1 ENST00000431149.1 chr17:16229799-16250988 3 696 20489 exonic 0.18 0 0,0,0 0 0,0,0 15.1724137931034 5.18429401142076 99.157 21.5186781609195 7.36068134120748 48.368 20.3045977011494 8.46034457513788 48.626 0 0 cat,chimp,cow,dog,elephant,guinea_pig,horse,human,macaque,marmoset,orangutan,panda,rabbit, antisense antisense A549@0.329147,AG04450@0.356166,BJ@0.224004,GM12878@0.573258,H1HESC@0.172595,HELAS3@0.377235,HEPG2@0.741206,HMEC@0.152304,HSMM@0.20747,HUVEC@0.168145,K562@0.347368,MCF7@0.372266,NHEK@0.414276,NHLF@0.352183,SKNSHRA@0.607206, 0 0 0 0 ENSG00000225436.1 ENST00000414755.1 chr17:16230158-16247809 3 385 17262 exonic 4.86 0 0,0,0 0 0,0,0 27.4285714285714 3.08625883443402 39.836 38.9012987012987 5.73809523809524 24.816 36.7064935064935 6.51343992584868 23.556 0 0 chimp,dog,elephant,horse,human,macaque,marmoset,orangutan,rabbit, antisense antisense A549@0.329147,AG04450@0.356166,BJ@0.224004,GM12878@0.573258,H1HESC@0.172595,HELAS3@0.377235,HEPG2@0.741206,HMEC@0.152304,HSMM@0.20747,HUVEC@0.168145,K562@0.347368,MCF7@0.372266,NHEK@0.414276,NHLF@0.352183,SKNSHRA@0.607206, 0 0 0 0 ENSG00000175061.9 ENST00000487066.1 chr17:16342289-16345052 6 757 1996 intergenic -25.48 0 0,1,1 1 0,1,0 0 14.1052104208417 0 203.076618229855 33.1998997995992 8.516 202.273447820343 36.2334669338677 8.806 1 1 chimp,human,macaque,marmoset,orangutan, lincRNA non_coding A549@262.46,AG04450@211.566,BJ@247.806,GM12878@176.423,H1HESC@285.63,HELAS3@318.764,HEPG2@232.863,HMEC@165.403,HSMM@177.703,HUVEC@223.392,K562@347.774,MCF7@140.723,NHEK@249.309,NHLF@205.017,SKNSHRA@117.291, 0 0 0 0 ENSG00000175061.9 ENST00000481898.1 chr17:16342301-16345342 6 987 2044 exonic 1.74 1 1,1,1 1 0,1,0 0 13.7739726027397 0 228.479229989868 32.5327788649706 8.516 224.554204660588 35.5014677103718 8.806 1 1 chimp,human,macaque,marmoset,orangutan, lincRNA non_coding A549@262.46,AG04450@211.566,BJ@247.806,GM12878@176.423,H1HESC@285.63,HELAS3@318.764,HEPG2@232.863,HMEC@165.403,HSMM@177.703,HUVEC@223.392,K562@347.774,MCF7@140.723,NHEK@249.309,NHLF@205.017,SKNSHRA@117.291, 0 0 0 0 ENSG00000175061.9 ENST00000497774.1 chr17:16342325-16345309 4 1658 1320 intergenic 1.75 1 1,1,1 1 0,1,0 9.35102533172497 9.58333333333333 0 150.089264173703 23.2545454545455 8.516 150.7876960193 24.1515151515152 8.806 0 0 chimp,horse,human,macaque,orangutan,panda, lincRNA non_coding A549@262.46,AG04450@211.566,BJ@247.806,GM12878@176.423,H1HESC@285.63,HELAS3@318.764,HEPG2@232.863,HMEC@165.403,HSMM@177.703,HUVEC@223.392,K562@347.774,MCF7@140.723,NHEK@249.309,NHLF@205.017,SKNSHRA@117.291, 0 0 0 0 ENSG00000175061.9 ENST00000475947.1 chr17:16342332-16345047 4 562 2147 intergenic 4.76 0 1,1,1 1 0,1,0 0 13.1131811830461 0 220.169039145907 31.1946902654867 8.516 216.272241992883 34.0451793199814 8.806 1 1 chimp,human,macaque,marmoset,orangutan, lincRNA non_coding A549@262.46,AG04450@211.566,BJ@247.806,GM12878@176.423,H1HESC@285.63,HELAS3@318.764,HEPG2@232.863,HMEC@165.403,HSMM@177.703,HUVEC@223.392,K562@347.774,MCF7@140.723,NHEK@249.309,NHLF@205.017,SKNSHRA@117.291, 0 0 0 0 ENSG00000175061.9 ENST00000492250.1 chr17:16342352-16344816 4 561 1897 intergenic -0.54 0 1,1,1 1 0,1,0 22.5490196078431 8.17290458618872 0 56.1729055258467 18.872430152873 8.516 58.3654188948307 21.4470216130733 8.806 0 0 chimp,cow,elephant,guinea_pig,horse,human,macaque,marmoset,orangutan,panda,pig, lincRNA non_coding A549@262.46,AG04450@211.566,BJ@247.806,GM12878@176.423,H1HESC@285.63,HELAS3@318.764,HEPG2@232.863,HMEC@165.403,HSMM@177.703,HUVEC@223.392,K562@347.774,MCF7@140.723,NHEK@249.309,NHLF@205.017,SKNSHRA@117.291, 0 0 0 0 ENSG00000175061.9 ENST00000472293.1 chr17:16342352-16345332 4 1173 1801 exonic 4.74 1 1,1,1 1 0,1,0 0 15.6324264297612 0 4.68712702472293 35.0399777901166 8.516 4.70417732310315 38.4425319267074 8.806 1 1 chimp,human,macaque,marmoset,orangutan, lincRNA non_coding A549@262.46,AG04450@211.566,BJ@247.806,GM12878@176.423,H1HESC@285.63,HELAS3@318.764,HEPG2@232.863,HMEC@165.403,HSMM@177.703,HUVEC@223.392,K562@347.774,MCF7@140.723,NHEK@249.309,NHLF@205.017,SKNSHRA@117.291, 0 0 0 0 ENSG00000175061.9 ENST00000475953.1 chr17:16342359-16345342 5 1196 1779 exonic 4.33 1 1,1,1 1 0,1,0 0 15.8257448004497 0 188.552675585284 37.3788645306352 8.516 185.313545150502 40.7897695334458 8.806 1 1 chimp,human,macaque,marmoset,orangutan, lincRNA non_coding A549@262.46,AG04450@211.566,BJ@247.806,GM12878@176.423,H1HESC@285.63,HELAS3@318.764,HEPG2@232.863,HMEC@165.403,HSMM@177.703,HUVEC@223.392,K562@347.774,MCF7@140.723,NHEK@249.309,NHLF@205.017,SKNSHRA@117.291, 0 0 0 0 ENSG00000175061.9 ENST00000470491.1 chr17:16342373-16345131 3 872 1882 intergenic 4.74 0 1,1,1 1 0,1,0 0 14.9596174282678 0 174.553899082569 35.5871413390011 8.516 171.464449541284 38.8390010626993 8.806 1 1 chimp,human,macaque,marmoset,orangutan, lincRNA non_coding A549@262.46,AG04450@211.566,BJ@247.806,GM12878@176.423,H1HESC@285.63,HELAS3@318.764,HEPG2@232.863,HMEC@165.403,HSMM@177.703,HUVEC@223.392,K562@347.774,MCF7@140.723,NHEK@249.309,NHLF@205.017,SKNSHRA@117.291, 0 0 0 0 ENSG00000175061.9 ENST00000481027.1 chr17:16342635-16345301 5 1011 1647 intergenic -3.48 1 1,1,1 1 0,1,0 0 17.0941105039466 0 216.385756676558 34.8755312689739 8.516 216.018793273986 36.5239829993928 8.806 1 1 chimp,human,macaque,marmoset,orangutan, lincRNA non_coding A549@262.46,AG04450@211.566,BJ@247.806,GM12878@176.423,H1HESC@285.63,HELAS3@318.764,HEPG2@232.863,HMEC@165.403,HSMM@177.703,HUVEC@223.392,K562@347.774,MCF7@140.723,NHEK@249.309,NHLF@205.017,SKNSHRA@117.291, 0 0 0 0 ENSG00000175061.9 ENST00000477249.1 chr17:16342639-16345280 4 885 1750 intergenic -3.48 1 1,1,1 1 0,1,0 0 16.088 0 280.518644067797 37.816 8.516 280.344632768362 41.2697142857143 8.806 1 1 chimp,human,macaque,marmoset,orangutan, lincRNA non_coding A549@262.46,AG04450@211.566,BJ@247.806,GM12878@176.423,H1HESC@285.63,HELAS3@318.764,HEPG2@232.863,HMEC@165.403,HSMM@177.703,HUVEC@223.392,K562@347.774,MCF7@140.723,NHEK@249.309,NHLF@205.017,SKNSHRA@117.291, 0 0 0 0 ENSG00000175061.9 ENST00000483588.1 chr17:16342640-16367300 5 684 23968 intronic -3.38 1 0,1,1 1 0,1,0 0 15.5807326435247 0 0 16.5342122830441 8.516 0 19.0062583444593 8.806 1 1 chimp,human,macaque,marmoset,orangutan, lincRNA non_coding A549@262.46,AG04450@211.566,BJ@247.806,GM12878@176.423,H1HESC@285.63,HELAS3@318.764,HEPG2@232.863,HMEC@165.403,HSMM@177.703,HUVEC@223.392,K562@347.774,MCF7@140.723,NHEK@249.309,NHLF@205.017,SKNSHRA@117.291, 0 0 0 0 ENSG00000175061.9 ENST00000460249.1 chr17:16342641-16344880 4 769 1464 intergenic -4.98 0 0,1,1 1 0,1,0 16.4499349804941 10.5901639344262 0 77.4681404421327 24.297131147541 8.516 81.1300390117035 27.6243169398907 8.806 0 0 chimp,horse,human,macaque,marmoset,orangutan, lincRNA non_coding A549@262.46,AG04450@211.566,BJ@247.806,GM12878@176.423,H1HESC@285.63,HELAS3@318.764,HEPG2@232.863,HMEC@165.403,HSMM@177.703,HUVEC@223.392,K562@347.774,MCF7@140.723,NHEK@249.309,NHLF@205.017,SKNSHRA@117.291, 0 0 0 0 ENSG00000175061.9 ENST00000491009.1 chr17:16342641-16345093 3 860 1588 intergenic -4.98 0 0,1,1 1 0,1,0 14.7093023255814 9.7632241813602 0 36.643023255814 22.5447103274559 8.516 38.0732558139535 25.6202770780856 8.806 0 0 chimp,dog,human,macaque,marmoset,orangutan, lincRNA non_coding A549@262.46,AG04450@211.566,BJ@247.806,GM12878@176.423,H1HESC@285.63,HELAS3@318.764,HEPG2@232.863,HMEC@165.403,HSMM@177.703,HUVEC@223.392,K562@347.774,MCF7@140.723,NHEK@249.309,NHLF@205.017,SKNSHRA@117.291, 0 0 0 0 ENSG00000175061.9 ENST00000480811.1 chr17:16342641-16345146 4 964 1535 intergenic -25.48 0 0,1,1 1 0,1,0 0 18.3413680781759 0 175.729253112033 35.5889250814332 8.516 177.351659751037 36.7263843648208 8.806 0 0 chimp,guinea_pig,horse,human,macaque,marmoset,orangutan, lincRNA non_coding A549@262.46,AG04450@211.566,BJ@247.806,GM12878@176.423,H1HESC@285.63,HELAS3@318.764,HEPG2@232.863,HMEC@165.403,HSMM@177.703,HUVEC@223.392,K562@347.774,MCF7@140.723,NHEK@249.309,NHLF@205.017,SKNSHRA@117.291, 0 0 0 0 ENSG00000175061.9 ENST00000483140.1 chr17:16342641-16345337 4 932 1758 exonic -3.48 1 1,1,1 1 0,1,0 0 16.0147895335609 0 269.994635193133 37.9664391353811 8.516 267.543991416309 41.4402730375427 8.806 1 1 chimp,human,macaque,marmoset,orangutan, lincRNA non_coding A549@262.46,AG04450@211.566,BJ@247.806,GM12878@176.423,H1HESC@285.63,HELAS3@318.764,HEPG2@232.863,HMEC@165.403,HSMM@177.703,HUVEC@223.392,K562@347.774,MCF7@140.723,NHEK@249.309,NHLF@205.017,SKNSHRA@117.291, 0 0 0 0 ENSG00000175061.9 ENST00000472367.1 chr17:16342641-16367300 6 788 23861 intronic -3.38 1 0,1,1 1 0,1,0 0 15.6506013997737 0 11.0228426395939 16.2287833703533 8.516 15.2322335025381 18.5713926490927 8.806 1 1 chimp,human,macaque,marmoset,orangutan, lincRNA non_coding A549@262.46,AG04450@211.566,BJ@247.806,GM12878@176.423,H1HESC@285.63,HELAS3@318.764,HEPG2@232.863,HMEC@165.403,HSMM@177.703,HUVEC@223.392,K562@347.774,MCF7@140.723,NHEK@249.309,NHLF@205.017,SKNSHRA@117.291, 0 0 0 0 ENSG00000175061.9 ENST00000478103.1 chr17:16342641-16367300 5 1138 23513 intronic -4.40 1 0,1,1 1 0,1,0 0 15.882235359163 0 0.210017574692443 16.8338366010292 8.516 0.23286467486819 19.3515076766044 8.806 0 0 chimp,elephant,human,macaque,marmoset,orangutan,panda, lincRNA non_coding A549@262.46,AG04450@211.566,BJ@247.806,GM12878@176.423,H1HESC@285.63,HELAS3@318.764,HEPG2@232.863,HMEC@165.403,HSMM@177.703,HUVEC@223.392,K562@347.774,MCF7@140.723,NHEK@249.309,NHLF@205.017,SKNSHRA@117.291, 0 0 0 0 ENSG00000175061.9 ENST00000484836.1 chr17:16342659-16345056 5 816 1573 intergenic -25.48 0 0,1,1 1 0,1,0 0 17.8982835346472 0 221.824754901961 36.3134138588684 8.516 227.348039215686 38.0241576605213 8.806 0 0 chimp,elephant,horse,human,macaque,marmoset,orangutan,panda, lincRNA non_coding A549@262.46,AG04450@211.566,BJ@247.806,GM12878@176.423,H1HESC@285.63,HELAS3@318.764,HEPG2@232.863,HMEC@165.403,HSMM@177.703,HUVEC@223.392,K562@347.774,MCF7@140.723,NHEK@249.309,NHLF@205.017,SKNSHRA@117.291, 0 0 0 0 ENSG00000230709.1 ENST00000428142.1 chr17:16879313-16884667 3 2198 3152 intergenic 1.23 0 0,1,0 0 0,0,0 0 7.1510152284264 0 5.46587807097361 0 0 5.74567788898999 0 0 0 0 chimp,human,macaque,marmoset, lincRNA processed_transcript A549@0.00251,AG04450@0,BJ@0,GM12878@0.178426,H1HESC@0,HELAS3@0,HEPG2@0.0024785,HMEC@0,HSMM@0.000935,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0.002444, 0 0 0 0 ENSG00000225442.1 ENST00000428367.1 chr17:16979352-16980672 2 662 656 intronic -3.16 0 0,0,0 0 0,0,0 0 0 22.2 0 0 42.276 0 0 47.414 0 0 chimp,human,macaque,marmoset, antisense antisense A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0.0074535,HELAS3@0.003997,HEPG2@0.009694,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0.003028,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000223979.2 ENST00000456090.2 chr17:17577340-17581002 4 560 3096 intergenic -0.47 1 0,0,1 0 0,1,0 0 0 0 0 2.00710594315245 0 0 4.3921188630491 0 0 0 chimp,elephant,human,macaque,marmoset,orangutan, lincRNA lincRNA A549@0.093406,AG04450@0.012527,BJ@0.0782015,GM12878@0.0190345,H1HESC@0.008775,HELAS3@0.217746,HEPG2@0.0306785,HMEC@0.01452,HSMM@0.0303665,HUVEC@0.0503185,K562@0.0048325,MCF7@0.122654,NHEK@0.0725167,NHLF@0.003421,SKNSHRA@0.15852, 0 0 0 0 ENSG00000237328.1 ENST00000443696.1 chr17:17662468-17674135 3 721 10942 intronic 4.75 0 0,0,0 0 0,0,0 2.30929264909847 22.2064522025224 8.07 3.49514563106796 16.5342716139645 12.238 3.42579750346741 18.0176384573204 17.186 0 0 chimp,horse,human,macaque,marmoset,orangutan, antisense antisense A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0.0073315,HEPG2@0.007535,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0.01696,NHEK@0.00318433,NHLF@0,SKNSHRA@0.003139, 0 0 0 0 ENSG00000205266.4 ENST00000445433.1 chr17:18319042-18328409 8 2325 7028 intergenic 26.54 1 0,0,1 0 0,0,0 0 0 0 107.604731182796 1.95503699487763 0 170.642150537634 52.2693511667615 0 0 0 cat,chimp,dog,elephant,human,macaque,marmoset,orangutan,panda,pig, processed_transcript processed_transcript A549@0.0080585,AG04450@0,BJ@0.0010555,GM12878@0,H1HESC@0.011717,HELAS3@0.0087625,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0.0023365,MCF7@0.0008815,NHEK@0,NHLF@0,SKNSHRA@0.001153, 0 0 0 0 ENSG00000205266.4 ENST00000444070.1 chr17:18323282-18328411 7 2545 2572 intergenic 26.54 1 0,0,1 0 0,0,0 0 0 0 98.3029469548134 5.34214618973561 0 137.073084479371 11.9265163297045 0 0 0 cat,chimp,human,macaque,marmoset,orangutan,panda, processed_transcript processed_transcript A549@0.0080585,AG04450@0,BJ@0.0010555,GM12878@0,H1HESC@0.011717,HELAS3@0.0087625,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0.0023365,MCF7@0.0008815,NHEK@0,NHLF@0,SKNSHRA@0.001153, 0 0 0 0 ENSG00000233327.3 ENST00000425211.1 chr17:18414535-18445234 10 4725 25956 encompassing 24.72 1 0,1,1 0 0,1,0 0 0 0 180.512380952381 1.65279704114656 0 364.130582010582 30.8209277238403 0 0 0 chimp,human,macaque,marmoset,orangutan,panda, processed_transcript processed_transcript A549@1.46548,AG04450@1.79917,BJ@1.10168,GM12878@1.17415,H1HESC@0.794976,HELAS3@0.57601,HEPG2@0.138382,HMEC@0.010306,HSMM@0.297585,HUVEC@1.01378,K562@0.25092,MCF7@1.40031,NHEK@1.03688,NHLF@0.472864,SKNSHRA@0.102647, 0 0 0 0 ENSG00000233327.3 ENST00000412260.1 chr17:18414576-18424120 5 4324 5212 intergenic 24.72 1 0,0,1 0 0,1,0 0 0 0 192.88413506013 5.34190330007675 14.34 391.86493987049 61.8635840368381 15.54 0 0 cat,chimp,dog,horse,human,macaque,marmoset,orangutan,panda, processed_transcript processed_transcript A549@1.46548,AG04450@1.79917,BJ@1.10168,GM12878@1.17415,H1HESC@0.794976,HELAS3@0.57601,HEPG2@0.138382,HMEC@0.010306,HSMM@0.297585,HUVEC@1.01378,K562@0.25092,MCF7@1.40031,NHEK@1.03688,NHLF@0.472864,SKNSHRA@0.102647, 0 0 0 0 ENSG00000233327.3 ENST00000414432.1 chr17:18417386-18424566 3 3756 3420 intergenic 7.29 0 0,0,0 0 0,1,0 0 0 0 74.6466986155484 0.774269005847953 14.34 169.846911608094 61.1450292397661 15.54 1 1 chimp,human,macaque,marmoset,orangutan, processed_transcript processed_transcript A549@1.46548,AG04450@1.79917,BJ@1.10168,GM12878@1.17415,H1HESC@0.794976,HELAS3@0.57601,HEPG2@0.138382,HMEC@0.010306,HSMM@0.297585,HUVEC@1.01378,K562@0.25092,MCF7@1.40031,NHEK@1.03688,NHLF@0.472864,SKNSHRA@0.102647, 0 0 0 0 ENSG00000233327.3 ENST00000421108.1 chr17:18418989-18422885 4 564 3326 intergenic -1.11 0 0,0,0 0 0,0,0 0 0 0 197.893617021277 0.796151533373421 37.695 514.459219858156 62.873120865905 69.72 0 0 chimp,dog,elephant,human,macaque,marmoset,mouse,orangutan,pig,platypus,rabbit,rat, processed_transcript processed_transcript A549@1.46548,AG04450@1.79917,BJ@1.10168,GM12878@1.17415,H1HESC@0.794976,HELAS3@0.57601,HEPG2@0.138382,HMEC@0.010306,HSMM@0.297585,HUVEC@1.01378,K562@0.25092,MCF7@1.40031,NHEK@1.03688,NHLF@0.472864,SKNSHRA@0.102647, 0 0 0 0 ENSG00000233327.3 ENST00000420856.1 chr17:18420604-18432126 3 614 10904 encompassing 0.79 0 0,0,0 0 0,0,0 0 0 0 188.939739413681 1.62380777696258 0 388.846905537459 54.0277879677183 0 0 0 chimp,human,macaque,marmoset,mouse,opossum,orangutan,pig, processed_transcript processed_transcript A549@1.46548,AG04450@1.79917,BJ@1.10168,GM12878@1.17415,H1HESC@0.794976,HELAS3@0.57601,HEPG2@0.138382,HMEC@0.010306,HSMM@0.297585,HUVEC@1.01378,K562@0.25092,MCF7@1.40031,NHEK@1.03688,NHLF@0.472864,SKNSHRA@0.102647, 0 0 0 0 ENSG00000154874.8 ENST00000446853.1 chr17:18431900-18454999 4 481 22612 intergenic -2.40 0 0,0,0 0 0,1,0 0 0 0 2.74220374220374 0.410268883778525 0 3.32848232848233 0.99336635414824 0 0 0 chimp,elephant,human,macaque,marmoset,orangutan, processed_transcript processed_transcript A549@2.85674,AG04450@1.57818,BJ@1.76892,GM12878@0.841516,H1HESC@0.207247,HELAS3@0.0632955,HEPG2@0.0358225,HMEC@0.011319,HSMM@0.851704,HUVEC@3.48615,K562@0.061292,MCF7@1.94997,NHEK@1.02087,NHLF@1.22327,SKNSHRA@0.0336525, 0 0 0 0 ENSG00000154874.8 ENST00000285176.8 chr17:18441117-18528921 18 8664 79106 intergenic 2.31 0 0,0,0 1 0,1,0 0 0.467120066745885 0 5.52793167128347 1.75913331479281 0 40.492728531856 6.66705433216191 0 0 0 chimp,elephant,dog,horse,human,orangutan,macaque,marmoset processed_transcript processed_transcript A549@2.85674,AG04450@1.57818,BJ@1.76892,GM12878@0.841516,H1HESC@0.207247,HELAS3@0.0632955,HEPG2@0.0358225,HMEC@0.011319,HSMM@0.851704,HUVEC@3.48615,K562@0.061292,MCF7@1.94997,NHEK@1.02087,NHLF@1.22327,SKNSHRA@0.0336525, 0 0 0 0 ENSG00000154874.8 ENST00000457330.1 chr17:18443761-18528921 17 6023 79105 intergenic 2.31 0 0,0,0 1 0,1,0 0 0.46712597180962 0 7.95185123692512 1.75915555274635 0 58.2912170014943 6.66386448391378 0 0 0 chimp,cow,dog,elephant,guinea_pig,horse,human,macaque,marmoset,opossum,orangutan,pig,rat, processed_transcript processed_transcript A549@2.85674,AG04450@1.57818,BJ@1.76892,GM12878@0.841516,H1HESC@0.207247,HELAS3@0.0632955,HEPG2@0.0358225,HMEC@0.011319,HSMM@0.851704,HUVEC@3.48615,K562@0.061292,MCF7@1.94997,NHEK@1.02087,NHLF@1.22327,SKNSHRA@0.0336525, 0 0 0 0 ENSG00000154874.8 ENST00000442583.1 chr17:18491593-18509704 5 987 17116 intergenic 2.18 0 0,0,0 0 0,1,0 0 0 0 0 0.376723533535873 7.075 45.0790273556231 1.23282308950689 30.416 0 0 cat,chimp,cow,dog,elephant,guinea_pig,horse,human,macaque,marmoset,mouse,opossum,orangutan,pig,platypus,rabbit,rat, processed_transcript processed_transcript A549@2.85674,AG04450@1.57818,BJ@1.76892,GM12878@0.841516,H1HESC@0.207247,HELAS3@0.0632955,HEPG2@0.0358225,HMEC@0.011319,HSMM@0.851704,HUVEC@3.48615,K562@0.061292,MCF7@1.94997,NHEK@1.02087,NHLF@1.22327,SKNSHRA@0.0336525, 0 0 0 0 ENSG00000154874.8 ENST00000425214.1 chr17:18494173-18507053 4 572 12302 intergenic -1.47 0 0,1,0 0 0,1,0 0 0 0 0 0 0 6.22727272727273 1.04072508535198 0 0 0 chimp,cow,elephant,guinea_pig,human,macaque,marmoset,orangutan,pig, processed_transcript processed_transcript A549@2.85674,AG04450@1.57818,BJ@1.76892,GM12878@0.841516,H1HESC@0.207247,HELAS3@0.0632955,HEPG2@0.0358225,HMEC@0.011319,HSMM@0.851704,HUVEC@3.48615,K562@0.061292,MCF7@1.94997,NHEK@1.02087,NHLF@1.22327,SKNSHRA@0.0336525, 0 0 0 0 ENSG00000154874.8 ENST00000445752.1 chr17:18506602-18528930 6 2191 20127 intergenic 5.45 0 0,0,0 1 0,1,0 0 0 0 5.38977635782748 0 0 35.4783204016431 2.6965270532121 0 0 0 cat,chimp,elephant,guinea_pig,human,macaque,marmoset,orangutan, processed_transcript processed_transcript A549@2.85674,AG04450@1.57818,BJ@1.76892,GM12878@0.841516,H1HESC@0.207247,HELAS3@0.0632955,HEPG2@0.0358225,HMEC@0.011319,HSMM@0.851704,HUVEC@3.48615,K562@0.061292,MCF7@1.94997,NHEK@1.02087,NHLF@1.22327,SKNSHRA@0.0336525, 0 0 0 0 ENSG00000154874.8 ENST00000455629.1 chr17:18509976-18528921 5 941 17996 intergenic 2.31 0 0,0,1 1 0,1,0 0 0 0 5.0308182784272 0 0 11.2178533475027 2.92892865081129 0 0 0 chimp,cow,human,macaque,marmoset,orangutan, processed_transcript processed_transcript A549@2.85674,AG04450@1.57818,BJ@1.76892,GM12878@0.841516,H1HESC@0.207247,HELAS3@0.0632955,HEPG2@0.0358225,HMEC@0.011319,HSMM@0.851704,HUVEC@3.48615,K562@0.061292,MCF7@1.94997,NHEK@1.02087,NHLF@1.22327,SKNSHRA@0.0336525, 0 0 0 0 ENSG00000154874.8 ENST00000450277.1 chr17:18523399-18528854 3 686 4765 intergenic 1.21 1 0,0,0 1 0,1,0 0 0 0 0 0 0 0 0 0 1 1 chimp,human,macaque,marmoset,orangutan, processed_transcript processed_transcript A549@2.85674,AG04450@1.57818,BJ@1.76892,GM12878@0.841516,H1HESC@0.207247,HELAS3@0.0632955,HEPG2@0.0358225,HMEC@0.011319,HSMM@0.851704,HUVEC@3.48615,K562@0.061292,MCF7@1.94997,NHEK@1.02087,NHLF@1.22327,SKNSHRA@0.0336525, 0 0 0 0 ENSG00000213688.4 ENST00000454745.1 chr17:18566485-18585541 4 398 18652 intergenic 0 0 0,1,0 1 0,0,1 54.7236180904523 1.40124383444135 0 118.663316582915 43.9132532704268 24.961 135.314070351759 205.186307098434 29.652 0 0 cat,chimp,cow,dog,horse,human,macaque,marmoset,mouse,orangutan,panda,rabbit,rat, processed_transcript processed_transcript A549@2.10607,AG04450@3.50809,BJ@8.51811,GM12878@1.8251,H1HESC@7.63872,HELAS3@0.91723,HEPG2@0.593438,HMEC@2.34012,HSMM@1.41804,HUVEC@6.46239,K562@1.12445,MCF7@0.920332,NHEK@0.751243,NHLF@0.811389,SKNSHRA@5.28458, 0 0 0 0 ENSG00000248683.1 ENST00000507743.1 chr17:18573265-18576264 2 2872 125 intergenic 15.19 0 0,1,1 0 0,0,0 0 0 0 141.191155988858 472 91.415 544.993732590529 363.92 603 0 0 human, lincRNA lincRNA A549@0.014818,AG04450@0.040416,BJ@0.031373,GM12878@0.001403,H1HESC@0.026109,HELAS3@0.0208535,HEPG2@0.0115535,HMEC@0,HSMM@0.007468,HUVEC@0,K562@0.0018965,MCF7@0.065406,NHEK@0.003209,NHLF@0.006062,SKNSHRA@0.03542, 0 0 0 0 ENSG00000213688.4 ENST00000442380.1 chr17:18576106-18585572 4 636 8824 intergenic 0 0 0,1,0 1 0,0,1 0 0 0 186.885220125786 7.4466228467815 14.7 262.877358490566 78.5886219401632 19.236 0 0 cow,human,marmoset,opossum,rabbit, processed_transcript processed_transcript A549@2.10607,AG04450@3.50809,BJ@8.51811,GM12878@1.8251,H1HESC@7.63872,HELAS3@0.91723,HEPG2@0.593438,HMEC@2.34012,HSMM@1.41804,HUVEC@6.46239,K562@1.12445,MCF7@0.920332,NHEK@0.751243,NHLF@0.811389,SKNSHRA@5.28458, 0 0 0 0 ENSG00000213688.4 ENST00000441807.1 chr17:18576350-18585517 3 695 8468 intergenic 4.04 0 0,1,1 1 0,0,1 0 0 0 53.0805755395683 7.52515351913085 32.905 43.6230215827338 81.6544638639584 37.716 0 0 cat,chimp,dog,horse,human,macaque,marmoset,rabbit,rat, processed_transcript processed_transcript A549@2.10607,AG04450@3.50809,BJ@8.51811,GM12878@1.8251,H1HESC@7.63872,HELAS3@0.91723,HEPG2@0.593438,HMEC@2.34012,HSMM@1.41804,HUVEC@6.46239,K562@1.12445,MCF7@0.920332,NHEK@0.751243,NHLF@0.811389,SKNSHRA@5.28458, 0 0 0 0 ENSG00000213688.4 ENST00000443457.1 chr17:18584064-18585131 2 502 563 intergenic 0 0 0,0,0 0 0,0,1 0 0 0 61.0637450199203 0 35.553 40.1513944223108 0 40.404 0 0 cat,chimp,cow,dog,elephant,guinea_pig,horse,human,macaque,marmoset,mouse,panda,rabbit,rat, processed_transcript processed_transcript A549@2.10607,AG04450@3.50809,BJ@8.51811,GM12878@1.8251,H1HESC@7.63872,HELAS3@0.91723,HEPG2@0.593438,HMEC@2.34012,HSMM@1.41804,HUVEC@6.46239,K562@1.12445,MCF7@0.920332,NHEK@0.751243,NHLF@0.811389,SKNSHRA@5.28458, 0 0 0 0 ENSG00000196893.3 ENST00000354432.3 chr17:18854938-18857462 2 1487 1035 exonic 8.75 1 0,1,0 0 0,0,0 0 0 18.352 18.2044384667115 0 0 21.2010759919301 0 0 0 0 chimp,horse,human,macaque,marmoset,orangutan, antisense antisense A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0.0071295,HEPG2@0.0047545,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0.0018675, 0 0 0 0 ENSG00000226966.1 ENST00000441293.1 chr17:19174706-19177701 3 823 2168 intronic -0.70 1 0,0,1 0 0,0,0 0 21.7269372693727 12.331 0 25.114852398524 0 0 29.1775830258303 0 0 0 chimp,horse,human,macaque,marmoset,orangutan,panda, sense_intronic sense_intronic A549@0.27302,AG04450@0.064876,BJ@0.143394,GM12878@0.030373,H1HESC@0.146381,HELAS3@0.152631,HEPG2@0.13162,HMEC@0.01165,HSMM@0,HUVEC@0.241807,K562@0.075852,MCF7@0.011314,NHEK@0.173689,NHLF@0.0457505,SKNSHRA@0.088408, 0 0 0 0 ENSG00000235397.1 ENST00000451099.1 chr17:19199909-19209574 3 1187 8474 intronic 4.31 1 0,0,1 0 0,0,0 0 0 37.8 2.31255265374895 1.05723389190465 21.724 4.76663858466723 1.08048147274015 24.349 0 0 chimp,human,macaque,marmoset,orangutan,panda, antisense antisense A549@0,AG04450@0,BJ@0,GM12878@0.004915,H1HESC@0,HELAS3@0,HEPG2@0.0107425,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000128482.8 ENST00000461366.1 chr17:19314507-19320589 14 3198 2858 intergenic 135.42 1 0,0,1 1 0,1,1 160.232332707942 36.6763470958712 69.158 195.704190118824 22.0657802659202 77.23 154.044715447154 14.7533240027992 74.44 0 0 chimp,cow,dog,elephant,guinea_pig,human,macaque,marmoset,mouse,orangutan,rat, lincRNA lincRNA A549@0.09876,AG04450@0.890095,BJ@0.148369,GM12878@0.002817,H1HESC@0.290899,HELAS3@0.0083815,HEPG2@0.010707,HMEC@0.00255,HSMM@0.0151405,HUVEC@0.017526,K562@0.00239,MCF7@0.0184645,NHEK@0.020229,NHLF@1.00048,SKNSHRA@2.12664, 0 0 0 0 ENSG00000128482.8 ENST00000453070.2 chr17:19315003-19319825 10 1463 3341 intergenic 69.11 0 0,0,0 0 0,1,1 127.596035543404 103.465130200539 156.288 191.746411483254 99.4313079916193 150.914 174.805878332194 61.2232864411853 145.728 0 0 cat,chimp,dog,elephant,guinea_pig,horse,human,macaque,mouse,orangutan, lincRNA lincRNA A549@0.09876,AG04450@0.890095,BJ@0.148369,GM12878@0.002817,H1HESC@0.290899,HELAS3@0.0083815,HEPG2@0.010707,HMEC@0.00255,HSMM@0.0151405,HUVEC@0.017526,K562@0.00239,MCF7@0.0184645,NHEK@0.020229,NHLF@1.00048,SKNSHRA@2.12664, 0 0 0 0 ENSG00000227078.1 ENST00000437646.1 chr17:19322348-19327670 2 518 4802 intergenic -4.30 1 0,0,1 0 0,0,0 0 3.6734693877551 19.12 0 2.5301957517701 1.62 0 3.23073719283632 1.632 0 0 cat,chimp,cow,dog,elephant,guinea_pig,horse,human,macaque,marmoset,orangutan,panda, lincRNA lincRNA A549@0.047608,AG04450@0.040063,BJ@0.0653165,GM12878@0.027046,H1HESC@0.065663,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0.0037105,SKNSHRA@0.036456, 0 0 0 0 ENSG00000235979.1 ENST00000456537.1 chr17:19342456-19364048 3 438 21150 intergenic -0.79 0 0,0,0 0 0,0,0 0 1.66505910165485 0 0 20.049598108747 0 0 32.0909692671395 0 0 0 cat,chimp,cow,dog,elephant,horse,human,macaque,marmoset,orangutan,panda,pig, processed_transcript processed_transcript A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0.0049, 0 0 0 0 ENSG00000235979.1 ENST00000421796.1 chr17:19351428-19364026 3 537 12057 intergenic 0.03 0 0,0,0 0 0,0,0 0 0 0 0 0 0 0 0 0 0 0 NA processed_transcript processed_transcript A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0.0049, 0 0 0 0 ENSG00000231477.1 ENST00000435953.1 chr17:19360403-19361704 2 523 776 intergenic 1.35 0 0,0,0 0 0,0,0 0 0 0 0 0 0 0 0 0 0 0 chimp,human,macaque,orangutan, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000232820.1 ENST00000426080.1 chr17:19374432-19396222 3 431 21355 intergenic 1.11 0 0,0,0 0 0,0,0 0 0 0 0 0 0 0 0 0 0 0 chimp,human,macaque,orangutan, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0.0134115,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000243820.1 ENST00000420951.1 chr17:19483256-19499371 5 495 15612 intergenic -1.80 0 0,1,0 0 0,0,0 0 1.3025877530105 0 120.286868686869 6.67704330002562 0 189.630303030303 16.7004868050218 0 0 0 cat,chimp,cow,dog,horse,human,macaque,orangutan,pig,rat, processed_transcript processed_transcript A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0.0166965,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000240799.1 ENST00000454535.1 chr17:19484740-19494003 3 405 8854 intergenic -6.20 1 0,0,0 0 0,0,0 0 0 0 18.5802469135802 5.06539417212559 0 43.6098765432099 18.7034108877344 0 0 0 chimp,elephant,guinea_pig,horse,human,macaque,orangutan,panda, processed_transcript processed_transcript A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000231625.1 ENST00000452153.1 chr17:19532764-19537138 4 1146 3222 intergenic -4.19 0 0,1,0 0 0,0,0 0 0 0 22.5026178010471 0.824953445065177 0 199.889179755672 1.61980136561142 0 0 0 cat,chimp,dog,elephant,human,macaque,marmoset,orangutan,rabbit, lincRNA lincRNA A549@0.0578995,AG04450@0,BJ@0,GM12878@0,H1HESC@0.0310105,HELAS3@0.0036295,HEPG2@0.134728,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0.003576,NHEK@0,NHLF@0,SKNSHRA@0.0039525, 0 0 0 0 ENSG00000230528.2 ENST00000458685.1 chr17:20340137-20350557 5 2831 7581 intergenic 25.62 0 0,0,1 0 0,0,0 0 0 0 45.6608972094666 14.0858725761773 0 88.9498410455669 26.9707162643451 0 0 0 chimp,human,orangutan, processed_transcript processed_transcript A549@0.0214375,AG04450@0.009233,BJ@0,GM12878@0,H1HESC@0.0259875,HELAS3@0.063632,HEPG2@0.03595,HMEC@0.001444,HSMM@0.002255,HUVEC@0,K562@0.0033695,MCF7@0.0122605,NHEK@0.0411087,NHLF@0,SKNSHRA@0.0061935, 0 0 0 0 ENSG00000227685.1 ENST00000428134.1 chr17:20516225-20536547 4 616 19700 intergenic 2.02 0 0,1,0 0 0,0,0 0 0 0 0.63961038961039 7.14456852791878 0 212.756493506494 40.0952791878173 0 0 0 chimp,elephant,horse,human,macaque,marmoset,orangutan,pig, processed_transcript processed_transcript A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0.011884,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000227287.1 ENST00000435518.1 chr17:20747401-20747792 2 365 24 intergenic 5.18 0 0,1,1 0 0,0,0 0 0 0 216.405479452055 0 0 676.27397260274 680 15.561 0 0 chimp,cow,dog,elephant,guinea_pig,human,macaque,marmoset,mouse,opossum,orangutan,panda,pig,platypus,rat, sense_intronic sense_intronic A549@0,AG04450@0,BJ@0,GM12878@0.003375,H1HESC@0,HELAS3@0,HEPG2@0.0151355,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0.007109,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000233098.2 ENST00000439794.1 chr17:20771810-20884954 3 442 112698 intronic 4.49 0 0,1,0 0 0,0,0 0 0.337894195105503 0 39.5135746606335 2.30042236774388 0 53.8009049773756 13.1498784361746 0 0 0 chimp,cow,dog,guinea_pig,horse,human,macaque,marmoset,mouse,orangutan,panda,rabbit,rat, processed_transcript processed_transcript A549@0.0707135,AG04450@0.063708,BJ@0.0987665,GM12878@0.0302625,H1HESC@6.36853,HELAS3@1.78548,HEPG2@6.51564,HMEC@0,HSMM@0.171484,HUVEC@0.105639,K562@2.96586,MCF7@0.050372,NHEK@0.011474,NHLF@0.0774185,SKNSHRA@12.6371, 0 0 0 0 ENSG00000233098.2 ENST00000417232.1 chr17:20771919-20832879 4 890 60064 intronic 1.89 0 0,1,1 0 0,0,0 0 0 0 0 2.54744938732019 0 0 18.9422782365477 0 0 0 chimp,human,marmoset,orangutan, processed_transcript processed_transcript A549@0.0707135,AG04450@0.063708,BJ@0.0987665,GM12878@0.0302625,H1HESC@6.36853,HELAS3@1.78548,HEPG2@6.51564,HMEC@0,HSMM@0.171484,HUVEC@0.105639,K562@2.96586,MCF7@0.050372,NHEK@0.011474,NHLF@0.0774185,SKNSHRA@12.6371, 0 0 0 0 ENSG00000233098.2 ENST00000443508.1 chr17:20824338-20833046 3 920 7784 intergenic 2.66 0 0,1,1 0 0,0,0 0 0 0 0 0 0 0 0 0 0 0 chimp,human,macaque,orangutan, processed_transcript processed_transcript A549@0.0707135,AG04450@0.063708,BJ@0.0987665,GM12878@0.0302625,H1HESC@6.36853,HELAS3@1.78548,HEPG2@6.51564,HMEC@0,HSMM@0.171484,HUVEC@0.105639,K562@2.96586,MCF7@0.050372,NHEK@0.011474,NHLF@0.0774185,SKNSHRA@12.6371, 0 0 0 0 ENSG00000233098.2 ENST00000437829.1 chr17:20841851-20861660 5 739 19062 intergenic -7.81 0 0,0,0 0 0,0,0 0 1.99769174273424 0 22.7780784844384 2.81476235442241 0 24.319350473613 15.0040394502151 0 0 0 chimp,cow,elephant,horse,human,macaque,orangutan,panda,rabbit, processed_transcript processed_transcript A549@0.0707135,AG04450@0.063708,BJ@0.0987665,GM12878@0.0302625,H1HESC@6.36853,HELAS3@1.78548,HEPG2@6.51564,HMEC@0,HSMM@0.171484,HUVEC@0.105639,K562@2.96586,MCF7@0.050372,NHEK@0.011474,NHLF@0.0774185,SKNSHRA@12.6371, 0 0 0 0 ENSG00000233098.2 ENST00000423473.1 chr17:20841891-20901341 6 2023 57417 intergenic 5.64 0 0,0,0 0 0,0,0 0 0.663218210634481 0 8.32081067721206 1.97657488200359 0 111.765200197726 10.1917202222338 0 0 0 chimp,dog,horse,human,macaque,marmoset,orangutan,rabbit, processed_transcript processed_transcript A549@0.0707135,AG04450@0.063708,BJ@0.0987665,GM12878@0.0302625,H1HESC@6.36853,HELAS3@1.78548,HEPG2@6.51564,HMEC@0,HSMM@0.171484,HUVEC@0.105639,K562@2.96586,MCF7@0.050372,NHEK@0.011474,NHLF@0.0774185,SKNSHRA@12.6371, 0 0 0 0 ENSG00000233098.2 ENST00000433763.1 chr17:20854749-20861686 4 618 6313 intergenic 0 0 0,0,0 0 0,0,0 0 6.03199746554728 0 27.2378640776699 8.49912878187866 0 29.0809061488673 9.052431490575 0 0 0 chimp,cow,dog,horse,human,macaque,marmoset,orangutan,rabbit,rat, processed_transcript processed_transcript A549@0.0707135,AG04450@0.063708,BJ@0.0987665,GM12878@0.0302625,H1HESC@6.36853,HELAS3@1.78548,HEPG2@6.51564,HMEC@0,HSMM@0.171484,HUVEC@0.105639,K562@2.96586,MCF7@0.050372,NHEK@0.011474,NHLF@0.0774185,SKNSHRA@12.6371, 0 0 0 0 ENSG00000236819.1 ENST00000456235.1 chr17:20978869-20993928 2 748 14309 intergenic 1.15 0 0,1,0 0 0,0,0 0 0 0 0 0 0 0 0 0 0 0 chimp,human, lincRNA lincRNA A549@0,AG04450@0,BJ@0.018365,GM12878@0.0062505,H1HESC@0.0131975,HELAS3@0,HEPG2@0.002841,HMEC@0,HSMM@4.30696,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000235530.1 ENST00000439136.1 chr17:21117671-21133348 3 457 15216 exonic -1.43 1 1,1,1 1 0,0,0 0 0 43.2 0 0.34108832807571 50.133 0 0.368690851735016 59.036 0 0 chimp,human,macaque,orangutan, antisense antisense A549@0.400728,AG04450@0.187781,BJ@0.183288,GM12878@0.168401,H1HESC@0.0598225,HELAS3@0.536095,HEPG2@0.541591,HMEC@0.026704,HSMM@0.004473,HUVEC@0.311934,K562@0.299106,MCF7@0.353206,NHEK@0.213084,NHLF@0.0564325,SKNSHRA@0.274415, 0 0 0 0 ENSG00000154035.6 ENST00000399011.2 chr17:21142183-21156578 4 4780 9609 intergenic 72.30 1 1,1,1 0 0,1,1 27.4309623430962 1.52055364762202 17.663 42.9470711297071 1.55416796753044 28.99 47.7495815899582 1.7046518888542 31.997 0 1 chimp,human, lincRNA processed_transcript A549@0.460329,AG04450@1.66816,BJ@4.14217,GM12878@0.084797,H1HESC@2.85719,HELAS3@0.971427,HEPG2@1.20589,HMEC@1.23562,HSMM@3.0139,HUVEC@2.68,K562@0.652983,MCF7@0.696016,NHEK@1.32021,NHLF@2.19234,SKNSHRA@3.55538, 0 0 0 0 ENSG00000154035.6 ENST00000468196.1 chr17:21142188-21156722 3 4922 9608 intergenic 17.12 1 1,1,1 0 0,1,1 27.0818772856562 1.48834304746045 16.73 42.2127184071516 1.49989592006661 28.037 47.15318976026 1.64498334721066 29.544 0 1 chimp,human, lincRNA processed_transcript A549@0.460329,AG04450@1.66816,BJ@4.14217,GM12878@0.084797,H1HESC@2.85719,HELAS3@0.971427,HEPG2@1.20589,HMEC@1.23562,HSMM@3.0139,HUVEC@2.68,K562@0.652983,MCF7@0.696016,NHEK@1.32021,NHLF@2.19234,SKNSHRA@3.55538, 0 0 0 0 ENSG00000237575.3 ENST00000441253.1 chr17:26553840-26555091 2 823 426 intergenic 19.52 0 0,0,0 0 0,0,0 0 0 0 100.979343863913 0 13.734 150.390036452005 6.60093896713615 13.65 0 0 cat,chimp,dog,elephant,horse,human,macaque,marmoset,mouse,orangutan,pig,rabbit, processed_transcript processed_transcript A549@0.004088,AG04450@0,BJ@0.011835,GM12878@0.004887,H1HESC@0.146093,HELAS3@0.0134645,HEPG2@0.0033065,HMEC@0.004963,HSMM@0.002494,HUVEC@0.104566,K562@0,MCF7@0.0356225,NHEK@0.009545,NHLF@0,SKNSHRA@0.0192745, 0 0 0 0 ENSG00000004142.6 ENST00000540200.1 chr17:26673659-26684473 12 2576 8216 exonic 61.71 0 1,1,1 1 0,0,1 170.96350931677 11.2332035053554 9.2 246.897903726708 9.17259006815969 86.407 261.73097826087 16.176241480039 84.075 0 0 cat,chimp,cow,dog,guinea_pig,horse,human,macaque,marmoset,orangutan,panda,rat, antisense antisense A549@36.732,AG04450@21.3447,BJ@30.3416,GM12878@15.6695,H1HESC@25.4832,HELAS3@40.804,HEPG2@31.9941,HMEC@27.1256,HSMM@30.5501,HUVEC@24.886,K562@18.9466,MCF7@17.8626,NHEK@26.7028,NHLF@35.3077,SKNSHRA@19.9279, 0 0 0 0 ENSG00000004142.6 ENST00000003607.3 chr17:26674233-26684545 11 2077 8215 intergenic 18.18 1 1,1,1 1 0,0,1 205.050553683197 11.2345709068777 4.37 305.772749157439 9.17370663420572 58.599 319.063553201733 16.1782105903834 60.55 0 0 cat,chimp,cow,dog,elephant,guinea_pig,horse,human,macaque,marmoset,orangutan,panda,rabbit,rat, antisense antisense A549@36.732,AG04450@21.3447,BJ@30.3416,GM12878@15.6695,H1HESC@25.4832,HELAS3@40.804,HEPG2@31.9941,HMEC@27.1256,HSMM@30.5501,HUVEC@24.886,K562@18.9466,MCF7@17.8626,NHEK@26.7028,NHLF@35.3077,SKNSHRA@19.9279, 0 0 0 0 ENSG00000227543.1 ENST00000414744.1 chr17:26925808-26944393 2 2139 16444 exonic 5.88 0 0,0,1 0 0,0,0 104.122019635344 57.9382145463391 56.113 170.071061243572 81.1204694721479 115.429 176.572697522207 79.8922403308197 96.284 0 0 chimp,cow,dog,horse,human,macaque,marmoset,orangutan, antisense antisense A549@0.147992,AG04450@0.033693,BJ@0.0402725,GM12878@0.202085,H1HESC@0.0447645,HELAS3@0.494357,HEPG2@0.236684,HMEC@0,HSMM@0.0346775,HUVEC@0.062696,K562@0.210317,MCF7@0.0240475,NHEK@0.0114173,NHLF@0.017555,SKNSHRA@0.076434, 0 0 0 0 ENSG00000227543.1 ENST00000424210.1 chr17:26938950-26944393 3 1548 3891 exonic 7.81 0 0,0,1 0 0,0,0 202.326873385013 148.214854793112 207.114 278.761627906977 210.377794911334 224.13 291.178940568475 198.387047031611 196.331 0 0 chimp,cow,dog,elephant,guinea_pig,horse,human,macaque,marmoset,orangutan,panda,pig,rabbit,rat, antisense antisense A549@0.147992,AG04450@0.033693,BJ@0.0402725,GM12878@0.202085,H1HESC@0.0447645,HELAS3@0.494357,HEPG2@0.236684,HMEC@0,HSMM@0.0346775,HUVEC@0.062696,K562@0.210317,MCF7@0.0240475,NHEK@0.0114173,NHLF@0.017555,SKNSHRA@0.076434, 0 0 0 0 ENSG00000238007.1 ENST00000436028.1 chr17:27339883-27343530 2 222 3423 intergenic 2.53 0 0,1,1 0 0,0,0 65.9864864864865 34.9553023663453 43.125 144.540540540541 54.9284253578732 54.983 125.369369369369 54.2053754016944 65.687 0 0 chimp,cow,dog,guinea_pig,horse,human,macaque,marmoset,mouse,orangutan,panda,pig,rabbit,rat, lincRNA lincRNA A549@0.006271,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000238007.1 ENST00000426489.1 chr17:27342360-27343530 2 493 675 intergenic 2.53 0 0,0,1 0 0,0,0 29.7139959432049 0 119.652 65.0872210953347 8.97925925925926 180.223 56.4543610547667 9.14814814814815 176.19 0 0 chimp,cow,elephant,guinea_pig,horse,human,macaque,marmoset,orangutan,panda,pig,rabbit,rat, lincRNA lincRNA A549@0.006271,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000214719.4 ENST00000398849.2 chr17:28903526-28961341 9 1402 56397 intergenic 13.39 1 0,1,1 0 0,0,0 0 3.70200542582052 0 132.840228245364 16.8101317445963 0 172.675463623395 38.8613578736458 4.662 0 0 guinea_pig,human,macaque, processed_transcript processed_transcript A549@19.9184,AG04450@9.10693,BJ@7.69114,GM12878@8.30684,H1HESC@11.5827,HELAS3@12.6506,HEPG2@22.8982,HMEC@6.3111,HSMM@6.60184,HUVEC@8.1323,K562@0.233116,MCF7@2.55725,NHEK@6.47721,NHLF@7.78877,SKNSHRA@9.68212, 0 0 0 0 ENSG00000214719.4 ENST00000431308.1 chr17:28934664-28961180 6 799 25707 intergenic -0.67 1 0,0,1 0 0,0,0 0 2.34566460497141 0 125.067584480601 16.128175205197 121.951 175.116395494368 57.1302369004551 130.948 0 0 cat,chimp,cow,dog,elephant,guinea_pig,horse,human,macaque,marmoset,mouse,opossum,orangutan,pig,rabbit, processed_transcript processed_transcript A549@19.9184,AG04450@9.10693,BJ@7.69114,GM12878@8.30684,H1HESC@11.5827,HELAS3@12.6506,HEPG2@22.8982,HMEC@6.3111,HSMM@6.60184,HUVEC@8.1323,K562@0.233116,MCF7@2.55725,NHEK@6.47721,NHLF@7.78877,SKNSHRA@9.68212, 0 0 0 0 ENSG00000214719.4 ENST00000440026.1 chr17:28934676-28962484 5 1956 25844 intergenic -0.67 0 0,0,1 0 0,0,0 0 2.33323015013156 0 49.1339468302658 15.9635505339731 127.819 69.9279141104294 56.7227209410308 133.684 0 0 chimp,human,macaque,marmoset,orangutan, processed_transcript processed_transcript A549@19.9184,AG04450@9.10693,BJ@7.69114,GM12878@8.30684,H1HESC@11.5827,HELAS3@12.6506,HEPG2@22.8982,HMEC@6.3111,HSMM@6.60184,HUVEC@8.1323,K562@0.233116,MCF7@2.55725,NHEK@6.47721,NHLF@7.78877,SKNSHRA@9.68212, 0 0 0 0 ENSG00000214719.4 ENST00000412831.1 chr17:28958773-28961188 3 812 1599 intergenic -0.67 1 0,0,1 0 0,0,0 0 0 0 14.9433497536946 0 0 26.3608374384236 0.869293308317699 0 0 0 cat,chimp,cow,elephant,guinea_pig,horse,human,macaque,marmoset,mouse,orangutan,pig,rabbit,rat, processed_transcript processed_transcript A549@19.9184,AG04450@9.10693,BJ@7.69114,GM12878@8.30684,H1HESC@11.5827,HELAS3@12.6506,HEPG2@22.8982,HMEC@6.3111,HSMM@6.60184,HUVEC@8.1323,K562@0.233116,MCF7@2.55725,NHEK@6.47721,NHLF@7.78877,SKNSHRA@9.68212, 0 0 0 0 ENSG00000214719.4 ENST00000417404.1 chr17:28959140-28964482 2 4738 602 intergenic 3.09 1 0,0,1 0 0,0,0 0 0 0 2.56099620092866 0 0 4.51772899957788 2.30897009966777 0 0 0 chimp,human,macaque,orangutan, processed_transcript processed_transcript A549@19.9184,AG04450@9.10693,BJ@7.69114,GM12878@8.30684,H1HESC@11.5827,HELAS3@12.6506,HEPG2@22.8982,HMEC@6.3111,HSMM@6.60184,HUVEC@8.1323,K562@0.233116,MCF7@2.55725,NHEK@6.47721,NHLF@7.78877,SKNSHRA@9.68212, 0 0 0 0 ENSG00000247185.2 ENST00000499895.1 chr17:29036657-29097042 6 1605 58770 intergenic 1.26 0 0,1,1 0 0,0,0 105.828660436137 9.07937723328229 0 246.988161993769 23.2048323974817 290.142 267.728348909657 28.0896375701889 336.636 0 0 chimp,cow,dog,elephant,guinea_pig,horse,human,macaque,marmoset,mouse,opossum,orangutan,panda,pig,rabbit, lincRNA lincRNA A549@2.11383,AG04450@1.19376,BJ@0.784399,GM12878@5.53102,H1HESC@1.83813,HELAS3@2.57655,HEPG2@1.19918,HMEC@0.660065,HSMM@0.47622,HUVEC@0.919039,K562@4.96148,MCF7@1.50795,NHEK@1.06552,NHLF@0.856899,SKNSHRA@1.92344, 0 0 0 0 ENSG00000247185.2 ENST00000502024.1 chr17:29061081-29097067 7 1552 34422 intergenic 0.30 0 0,0,1 0 0,0,0 111.547036082474 3.14467491720411 0 246.063788659794 10.3704898030329 49.22 301.762242268041 12.013654058451 49.648 0 0 chimp,cow,dog,elephant,guinea_pig,horse,human,macaque,marmoset,mouse,opossum,orangutan,panda,pig,rabbit, lincRNA lincRNA A549@2.11383,AG04450@1.19376,BJ@0.784399,GM12878@5.53102,H1HESC@1.83813,HELAS3@2.57655,HEPG2@1.19918,HMEC@0.660065,HSMM@0.47622,HUVEC@0.919039,K562@4.96148,MCF7@1.50795,NHEK@1.06552,NHLF@0.856899,SKNSHRA@1.92344, 0 0 0 0 ENSG00000230113.1 ENST00000442757.1 chr17:29283298-29283979 2 543 136 exonic 0 0 0,1,0 0 0,0,0 125.443830570902 0 16.165 113.48802946593 3.75 12.942 126.633517495396 3.57352941176471 13.08 0 0 cat,chimp,cow,dog,elephant,guinea_pig,horse,human,macaque,marmoset,orangutan,panda,pig, antisense antisense A549@0,AG04450@0,BJ@0,GM12878@0.009745,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000250288.1 ENST00000504550.1 chr17:29351203-29359585 2 365 8015 intergenic 0 0 0,0,1 0 0,0,0 0 0 0 112.624657534247 9.67386150966937 0 161.47397260274 15.5416094822208 11.421 0 0 cat,chimp,cow,dog,elephant,guinea_pig,horse,human,macaque,marmoset,orangutan,panda,rabbit,rat, lincRNA lincRNA A549@0.069747,AG04450@0.314128,BJ@0.124283,GM12878@0.49766,H1HESC@0.013485,HELAS3@0.0467445,HEPG2@0,HMEC@0.011157,HSMM@0.0062115,HUVEC@0.386209,K562@0,MCF7@0.121513,NHEK@0.0423653,NHLF@0.411919,SKNSHRA@0, 0 0 0 0 ENSG00000246715.1 ENST00000429292.2 chr17:30748305-30772564 4 3026 21227 exonic 0.25 0 0,0,0 0 0,0,0 52.163251817581 2.92043152588684 43.47 67.6483807005948 0.807791963065907 42.883 69.1933245208196 8.13675978706365 45.051 0 1 chimp,human, lincRNA lincRNA A549@0.006147,AG04450@0.006211,BJ@0.003204,GM12878@0.0036835,H1HESC@0.0061885,HELAS3@0.0240235,HEPG2@0.0401865,HMEC@0.006757,HSMM@0.0161115,HUVEC@0.0209795,K562@0.010496,MCF7@0,NHEK@0.0175693,NHLF@0.00665,SKNSHRA@0.0078285, 0 0 0 0 ENSG00000226377.1 ENST00000435733.1 chr17:31203777-31205655 3 588 1286 exonic -1.29 0 1,1,1 0 0,0,0 82.812925170068 0 113.352 136.715986394558 44.2519440124417 131.124 151.787414965986 59.144634525661 128.869 0 0 chimp,cow,dog,elephant,guinea_pig,horse,human,macaque,marmoset,mouse,orangutan,panda,pig,rabbit,rat, antisense antisense A549@0.032174,AG04450@0,BJ@0.0206155,GM12878@0.530242,H1HESC@0.178791,HELAS3@0.0423765,HEPG2@0.173433,HMEC@0.360272,HSMM@0.0587095,HUVEC@0.121057,K562@0.221374,MCF7@0.079245,NHEK@0.665534,NHLF@0.0065295,SKNSHRA@0.011537, 0 0 0 0 ENSG00000236377.1 ENST00000444464.1 chr17:31232680-31233602 2 510 410 intergenic -2.44 1 0,0,1 0 0,0,0 0 0 0 31.5156862745098 0 0 47.1490196078431 0 0 0 0 cat,cow,dog,elephant,guinea_pig,horse,human,macaque,marmoset,opossum,orangutan,panda,pig,rabbit, lincRNA lincRNA A549@0,AG04450@0,BJ@0.018988,GM12878@0.071968,H1HESC@0.0341665,HELAS3@0,HEPG2@0,HMEC@0.031989,HSMM@0.017809,HUVEC@0,K562@0.13223,MCF7@0.0200785,NHEK@0.05534,NHLF@0.0037685,SKNSHRA@0, 0 0 0 0 ENSG00000225582.1 ENST00000447729.1 chr17:32806331-32806947 2 319 295 intergenic 0.41 0 0,0,0 0 0,0,0 0 163.501694915254 0 25.9529780564263 522.149152542373 3.566 26.0658307210031 213.494915254237 3.672 0 0 cat,chimp,cow,dog,elephant,horse,human,macaque,marmoset,orangutan,panda,pig,rabbit,rat, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000225582.1 ENST00000441287.1 chr17:32806353-32806976 2 321 300 intergenic -1.47 0 0,0,0 0 0,0,0 0 160.776666666667 0 25.791277258567 518.53 3.566 25.9034267912773 209.936666666667 3.672 0 0 cat,chimp,cow,dog,elephant,horse,human,macaque,marmoset,orangutan,panda,rabbit,rat, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000247843.1 ENST00000499949.1 chr17:33558469-33569346 2 2020 8855 intergenic 1.54 0 0,1,0 0 0,0,0 0 0 0 0 0 0 0 0 0 0 1 chimp,human,macaque,orangutan, lincRNA lincRNA A549@0.255057,AG04450@0.182944,BJ@0.261273,GM12878@0.127188,H1HESC@0.214147,HELAS3@0.271026,HEPG2@0.141322,HMEC@0.101252,HSMM@0.25913,HUVEC@0.12876,K562@0,MCF7@0.198657,NHEK@0.133273,NHLF@0.283,SKNSHRA@0.201871, 0 0 0 0 ENSG00000237805.1 ENST00000413928.1 chr17:34195971-34212867 5 657 16231 encompassing 0.82 0 0,0,1 0 0,0,0 18.751902587519 6.62620910603167 0 7.37442922374429 9.09075226418582 13.302 0.846270928462709 9.98773951081264 13.373 0 0 chimp,horse,human,macaque,orangutan,pig, antisense antisense A549@0.03815,AG04450@0.0067715,BJ@0.02206,GM12878@0.0510955,H1HESC@0.044855,HELAS3@0.0035305,HEPG2@0.006573,HMEC@0,HSMM@0,HUVEC@0.052604,K562@0.0259705,MCF7@0.058751,NHEK@0.00398867,NHLF@0,SKNSHRA@0.0205755, 0 0 0 0 ENSG00000224298.1 ENST00000441575.1 chr17:34408992-34417208 2 391 7823 intronic 1.95 0 0,0,1 0 0,0,0 0 2.8111977502237 0 0 13.7826920618689 0 0 12.9238143934552 0 0 0 chimp,dog,elephant,horse,human,macaque,marmoset,orangutan,panda,pig, antisense antisense A549@0,AG04450@0,BJ@0,GM12878@0.472554,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000245538.1 ENST00000499603.1 chr17:34897582-34900678 2 1363 1731 intergenic 0 0 1,1,1 1 0,0,0 0 0 267.327 0 35.5522819179665 417.099 0 43.1837088388215 406.091 0 0 cat,chimp,human,macaque, lincRNA lincRNA A549@0.182978,AG04450@0.159079,BJ@0.129466,GM12878@0.491978,H1HESC@0.126377,HELAS3@0.640558,HEPG2@0.306471,HMEC@0.077993,HSMM@0.048799,HUVEC@0.108538,K562@0.758339,MCF7@0.251623,NHEK@0.0903957,NHLF@0.0539855,SKNSHRA@0.27799, 0 0 0 0 ENSG00000255509.1 ENST00000528383.1 chr17:35218935-35293960 3 487 74534 intergenic -0.53 0 0,1,0 0 0,0,0 66.9301848049281 51.6454906485631 492.765 109.096509240246 68.0421418413074 348.383 105.595482546201 65.4607024981888 318.108 0 1 chimp,human,macaque,marmoset, lincRNA processed_transcript A549@0.159493,AG04450@0,BJ@0,GM12878@0,H1HESC@0.0975885,HELAS3@0.0036305,HEPG2@0.0080795,HMEC@0,HSMM@0,HUVEC@0,K562@0.12069,MCF7@0.066732,NHEK@0.048728,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000255509.1 ENST00000532387.1 chr17:35264428-35293957 2 490 29037 intergenic -5.34 0 0,1,0 0 0,0,0 78.0612244897959 74.4172951751214 493.305 127.842857142857 90.6737266246513 350.432 114.869387755102 84.3112924888935 319.908 0 0 cat,chimp,cow,dog,elephant,horse,human,macaque,marmoset,orangutan,panda,pig,rabbit,rat, lincRNA processed_transcript A549@0.159493,AG04450@0,BJ@0,GM12878@0,H1HESC@0.0975885,HELAS3@0.0036305,HEPG2@0.0080795,HMEC@0,HSMM@0,HUVEC@0,K562@0.12069,MCF7@0.066732,NHEK@0.048728,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000255509.1 ENST00000529264.1 chr17:35264573-35293951 4 636 28736 intergenic 4.02 0 0,1,1 0 0,0,0 54.3396226415094 75.1967914810691 495.69 97.9433962264151 91.4492274498887 354.53 90.5424528301887 84.987263363029 323.508 0 0 cat,chimp,cow,dog,elephant,guinea_pig,horse,human,macaque,marmoset,orangutan,panda,rabbit, lincRNA processed_transcript A549@0.159493,AG04450@0,BJ@0,GM12878@0,H1HESC@0.0975885,HELAS3@0.0036305,HEPG2@0.0080795,HMEC@0,HSMM@0,HUVEC@0,K562@0.12069,MCF7@0.066732,NHEK@0.048728,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000255509.1 ENST00000525111.1 chr17:35289409-35293921 2 1460 3050 intergenic 6.34 0 0,1,0 0 0,0,0 30.1602739726027 14.7672131147541 514.14 59.0506849315069 51.7150819672131 375.02 54.6534246575342 55.0685245901639 341.508 0 0 cat,chimp,dog,horse,human,macaque,marmoset,orangutan,panda,rabbit, lincRNA processed_transcript A549@0.159493,AG04450@0,BJ@0,GM12878@0,H1HESC@0.0975885,HELAS3@0.0036305,HEPG2@0.0080795,HMEC@0,HSMM@0,HUVEC@0,K562@0.12069,MCF7@0.066732,NHEK@0.048728,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000237184.1 ENST00000420946.1 chr17:36158869-36162759 3 475 3411 intergenic 0.93 0 0,0,0 0 0,0,0 0 28.0401641747288 0 0 22.5537965406039 0 0 29.2870126062738 0 0 0 NA lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0.0253035,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000228576.1 ENST00000429284.1 chr17:36606675-36608643 4 661 1301 intronic -4.76 0 1,1,1 1 0,0,0 0 107.168332052267 0 3.85325264750378 107.785549577248 7.572 3.93494704992436 107.022290545734 7.636 0 0 chimp,human,macaque,marmoset,orangutan, antisense ambiguous_orf A549@0.20874,AG04450@2.62847,BJ@15.4369,GM12878@0.0175095,H1HESC@5.24559,HELAS3@26.4128,HEPG2@5.05611,HMEC@0.240136,HSMM@1.56494,HUVEC@2.68943,K562@0.104027,MCF7@0,NHEK@4.7161,NHLF@4.18881,SKNSHRA@1.0893, 0 0 0 0 ENSG00000214553.3 ENST00000425901.1 chr17:37186159-37201194 4 3235 11794 intergenic 14.22 0 0,1,0 0 0,0,0 0 2.00618958792606 0 14.2132921174652 8.61912837035781 0 17.6710973724884 12.6070035611328 0 0 0 cat,chimp,cow,dog,elephant,guinea_pig,horse,human,macaque,marmoset,mouse,orangutan,pig,rabbit,rat, antisense antisense A549@0,AG04450@0.007964,BJ@0.001494,GM12878@0.005769,H1HESC@0.203717,HELAS3@0.074626,HEPG2@0.0279515,HMEC@0,HSMM@0.0084455,HUVEC@0,K562@0.0014335,MCF7@0.085941,NHEK@0,NHLF@0,SKNSHRA@0.008269, 0 0 0 0 ENSG00000234477.1 ENST00000418393.1 chr17:39077682-39132178 4 811 53679 exonic -2.89 1 0,0,1 0 0,0,0 6.64488286066584 16.8776057676186 0 56.0900123304562 25.897706738203 0 60.5635018495684 26.7042046237821 0 0 0 cat,chimp,cow,dog,elephant,guinea_pig,horse,human,macaque,marmoset,orangutan,panda,pig,rabbit,rat, antisense antisense A549@0.102279,AG04450@0.114597,BJ@0.059746,GM12878@0.0294435,H1HESC@0.0101815,HELAS3@3.5129,HEPG2@0.376572,HMEC@0.005024,HSMM@0.002797,HUVEC@0,K562@0,MCF7@0.5273,NHEK@0.16529,NHLF@0.0331715,SKNSHRA@0.0055675, 0 0 0 0 ENSG00000234859.1 ENST00000430006.1 chr17:39558668-39568840 3 2157 8011 intergenic 3.22 1 0,0,0 0 0,0,0 26.1121928604543 16.239670453127 0 32.4334724153917 29.0576707027837 0 41.653685674548 44.6428660591686 0 0 0 chimp,elephant,human,macaque,orangutan,panda, antisense antisense A549@0.002874,AG04450@0.000576,BJ@0.048738,GM12878@0.004818,H1HESC@0,HELAS3@0.0216045,HEPG2@0.036309,HMEC@0.005263,HSMM@0,HUVEC@0,K562@0,MCF7@0.0020675,NHEK@0.695316,NHLF@0.0008935,SKNSHRA@0.0843755, 0 0 0 0 ENSG00000234859.1 ENST00000432258.1 chr17:39558675-39581301 4 3886 18734 exonic 7.06 0 0,0,1 0 0,0,0 35.1911991765311 21.6079321020604 0 53.4603705609882 23.5475605850326 0 68.798250128667 31.1604035443579 0 0 0 chimp,human,macaque,orangutan,panda, antisense antisense A549@0.002874,AG04450@0.000576,BJ@0.048738,GM12878@0.004818,H1HESC@0,HELAS3@0.0216045,HEPG2@0.036309,HMEC@0.005263,HSMM@0,HUVEC@0,K562@0,MCF7@0.0020675,NHEK@0.695316,NHLF@0.0008935,SKNSHRA@0.0843755, 0 0 0 0 ENSG00000229732.1 ENST00000411759.1 chr17:39657235-39658661 2 474 950 exonic 0.83 0 1,1,1 0 0,0,0 35.8860759493671 0 0 61.1582278481013 8.23368421052631 6.331 58.8586497890295 9.74842105263158 6.63 0 0 cat,chimp,cow,dog,elephant,horse,human,macaque,marmoset,mouse,orangutan,panda,pig,rabbit,rat, antisense antisense A549@0.0188455,AG04450@0.0248775,BJ@0.0103445,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0.005108,K562@0.0652165,MCF7@0.0042235,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000226629.1 ENST00000456403.1 chr17:39705858-39710747 3 2138 2747 intergenic 2.72 0 0,0,1 0 0,0,0 0 0 14.03 1.13657623947615 0.957044048052421 0 1.48596819457437 1.50382235165635 0 0 0 chimp,human,macaque,orangutan, lincRNA processed_transcript A549@0.00258,AG04450@0,BJ@0,GM12878@0,H1HESC@0.006187,HELAS3@0.009917,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0.0022715,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000236194.1 ENST00000436061.1 chr17:40423352-40424701 2 677 670 intronic 3.94 0 0,0,0 0 0,0,0 135.347119645495 0 80.408 166.27917282127 1.90298507462687 99.382 152.09305760709 1.54626865671642 113.823 0 0 chimp,cow,dog,elephant,horse,human,macaque,marmoset,mouse,orangutan,panda,pig,rabbit, antisense antisense A549@0.128701,AG04450@0.171685,BJ@0.0464995,GM12878@0.200701,H1HESC@0.030789,HELAS3@0.452757,HEPG2@0.29933,HMEC@0,HSMM@0.005829,HUVEC@0.0864455,K562@2.0764,MCF7@0.023912,NHEK@0.045316,NHLF@0.0039995,SKNSHRA@0.091583, 0 0 0 0 ENSG00000213373.3 ENST00000301683.3 chr17:41026687-41050721 6 1952 22072 intergenic 5.56 1 0,0,0 0 0,1,0 0 1.55309894889453 0 6.77868852459016 3.12445632475535 0 7.08350409836066 22.3977890540051 6.526 0 1 chimp,human,macaque,orangutan, lincRNA processed_transcript A549@0.003133,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0.031933,HEPG2@0.215325,HMEC@0,HSMM@0.001164,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000213373.3 ENST00000431109.2 chr17:41031197-41050751 3 830 18720 intergenic -4.72 0 0,0,0 0 0,1,0 0 1.83119658119658 0 4.48192771084337 3.68392094017094 0 4.53614457831325 26.4083333333333 6.526 0 0 cat,chimp,dog,horse,human,macaque,marmoset,orangutan, lincRNA processed_transcript A549@0.003133,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0.031933,HEPG2@0.215325,HMEC@0,HSMM@0.001164,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000213373.3 ENST00000417193.1 chr17:41031505-41050717 4 556 18650 intergenic 1.42 0 0,0,0 0 0,1,0 0 1.83806970509383 0 6.69064748201439 3.69774798927614 0 6.77158273381295 26.5074530831099 6.526 0 0 chimp,dog,horse,human,macaque,marmoset,orangutan, lincRNA processed_transcript A549@0.003133,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0.031933,HEPG2@0.215325,HMEC@0,HSMM@0.001164,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000213373.3 ENST00000436546.1 chr17:41031607-41050721 5 574 18532 intergenic 1.42 0 0,0,0 0 0,1,0 0 1.84977336499029 0 15.1864111498258 3.45165119792791 0 16 26.3838225771638 6.526 0 0 chimp,cow,dog,elephant,horse,human,macaque,marmoset,orangutan, lincRNA processed_transcript A549@0.003133,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0.031933,HEPG2@0.215325,HMEC@0,HSMM@0.001164,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000236383.1 ENST00000427995.1 chr17:41368960-41376546 4 908 6672 exonic 5.34 0 0,0,0 0 0,0,0 6.00881057268722 8.3968824940048 0 23.4647577092511 7.89403477218225 2.976 23.2180616740088 8.05230815347722 3.108 0 0 cat,chimp,horse,human,macaque,marmoset,orangutan,panda,rabbit, antisense antisense A549@0,AG04450@0,BJ@0,GM12878@0.002749,H1HESC@0,HELAS3@0.0149505,HEPG2@0,HMEC@0,HSMM@0.002256,HUVEC@0,K562@0.0053675,MCF7@0.004409,NHEK@0,NHLF@0,SKNSHRA@0.002488, 0 0 0 0 ENSG00000236383.1 ENST00000433702.1 chr17:41373437-41381062 5 961 6656 intergenic 15.59 0 0,0,0 0 0,0,0 34.6638917793965 0.677734375 0 42.2622268470343 4.56370192307692 0 41.4297606659729 4.79281850961538 0 0 0 cat,chimp,cow,guinea_pig,horse,human,macaque,marmoset,orangutan,panda,rat, antisense antisense A549@0,AG04450@0,BJ@0,GM12878@0.002749,H1HESC@0,HELAS3@0.0149505,HEPG2@0,HMEC@0,HSMM@0.002256,HUVEC@0,K562@0.0053675,MCF7@0.004409,NHEK@0,NHLF@0,SKNSHRA@0.002488, 0 0 0 0 ENSG00000225445.1 ENST00000453562.1 chr17:42384668-42392683 4 557 7452 exonic 17.53 0 0,1,0 0 0,0,0 99.9856373429084 54.2954911433172 74.362 175.998204667864 84.4557165861513 122.707 186.843806104129 91.2661030595813 120.156 0 0 cat,chimp,cow,dog,horse,human,marmoset,orangutan,panda,rabbit, lincRNA processed_transcript A549@0.344039,AG04450@0.070823,BJ@0.263628,GM12878@0.220519,H1HESC@0.732491,HELAS3@0.292069,HEPG2@0.0525015,HMEC@0.18247,HSMM@0.305275,HUVEC@0,K562@0.042106,MCF7@1.70959,NHEK@0.834208,NHLF@0.0277475,SKNSHRA@0.16747, 0 0 0 0 ENSG00000237411.1 ENST00000424548.1 chr17:42396996-42397584 2 513 73 exonic -3.24 0 1,1,1 0 0,0,0 28.4191033138402 0 6.061 125.534113060429 9.83561643835616 10.657 129.604288499025 12.3013698630137 15.663 0 0 cat,chimp,cow,dog,horse,human,macaque,marmoset,orangutan,panda,pig,rabbit, antisense antisense A549@0.0130975,AG04450@0,BJ@0,GM12878@0,H1HESC@0.0096095,HELAS3@0.01621,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0.0094425,K562@0.009538,MCF7@0.003904,NHEK@0.00895367,NHLF@0,SKNSHRA@0.036909, 0 0 0 0 ENSG00000224911.1 ENST00000441312.1 chr17:42980529-42981914 2 502 881 exonic -1.69 0 0,0,1 0 0,0,0 72.7171314741036 147.032917139614 119.196 105.282868525896 254.465380249716 147.991 119.559760956175 206.50056753689 128.774 0 0 cat,chimp,cow,dog,elephant,guinea_pig,horse,human,macaque,marmoset,orangutan,panda,pig,rabbit, antisense antisense A549@0.006159,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000224505.1 ENST00000452741.1 chr17:43227985-43236822 2 426 8409 exonic 1.21 0 0,0,1 0 0,0,0 287.957746478873 12.9915566654775 0 137.823943661972 11.453323819717 0 127.18779342723 14.1515043405875 0 0 0 chimp,cow,dog,elephant,guinea_pig,horse,human,macaque,marmoset,orangutan,panda,pig,rabbit,rat, antisense antisense A549@0.326242,AG04450@0.23696,BJ@0.124198,GM12878@0.839414,H1HESC@0.0739895,HELAS3@0.695866,HEPG2@0.257362,HMEC@0.009567,HSMM@0.0640525,HUVEC@0.153695,K562@0.943728,MCF7@0.793411,NHEK@0.127796,NHLF@0.104195,SKNSHRA@0.679404, 0 0 0 0 ENSG00000246393.2 ENST00000498986.1 chr17:43289616-43299132 5 1680 7828 intergenic 5.46 0 0,1,0 0 0,0,0 50.8875 1.23403168114461 159.813 59.0767857142857 4.87774655084313 260.76 78.4779761904762 5.44251405212059 268.258 0 0 chimp,horse,human,macaque,marmoset,orangutan, lincRNA lincRNA A549@1.06492,AG04450@0.0842135,BJ@0.257466,GM12878@0.857583,H1HESC@0.195556,HELAS3@1.62081,HEPG2@0.312107,HMEC@0.104492,HSMM@0.780289,HUVEC@0.052022,K562@1.44517,MCF7@0.0338415,NHEK@0.03961,NHLF@0.0218605,SKNSHRA@0.256799, 0 0 0 0 ENSG00000233175.1 ENST00000393507.2 chr17:43317682-43318564 2 375 505 exonic 0.50 0 0,0,1 0 0,0,0 184.76 113.132673267327 49.849 259.109333333333 93.4514851485149 97.975 277.04 76.6277227722772 104.017 0 0 cat,chimp,cow,dog,elephant,horse,human,macaque,mouse,opossum,orangutan,panda,pig,rabbit,rat, antisense antisense A549@0.387217,AG04450@0.0427655,BJ@0.0731835,GM12878@0.052476,H1HESC@0.097849,HELAS3@0.297067,HEPG2@0.128653,HMEC@0.043444,HSMM@0,HUVEC@0,K562@0.152546,MCF7@0.08096,NHEK@0.054988,NHLF@0,SKNSHRA@0.751956, 0 0 0 0 ENSG00000250018.1 ENST00000502258.1 chr17:43357852-43360435 2 2424 157 intronic -1.65 0 0,0,0 0 0,0,0 0 0 26.471 0 0 12.193 0 0 12.673 1 1 chimp,human,macaque,marmoset,orangutan, lincRNA lincRNA A549@0,AG04450@0,BJ@0.0029495,GM12878@0.004822,H1HESC@0.0023995,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0.0031405,HUVEC@0.0022015,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0.004435, 0 0 0 0 ENSG00000236234.1 ENST00000433601.1 chr17:43530210-43541431 4 765 10450 intronic 3.43 0 0,0,0 0 0,0,0 0 3.97138755980861 73.86 3.12418300653595 42.1521531100479 8.388 3.28104575163399 41.7266985645933 8.492 0 0 chimp,human,macaque,marmoset,orangutan, antisense antisense A549@0,AG04450@0,BJ@0,GM12878@0.005243,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0.0088565, 0 0 0 0 ENSG00000232300.1 ENST00000458392.1 chr17:44636196-44640161 2 2181 1782 intronic 13.45 0 0,0,0 0 0,0,0 0 0 0 2.72902338376891 0 0 14.0857404860156 0 0 0 0 chimp,human,macaque,marmoset,orangutan, antisense antisense A549@1.50427,AG04450@0.305738,BJ@0.76357,GM12878@3.09959,H1HESC@4.98503,HELAS3@2.15687,HEPG2@2.4394,HMEC@0.437699,HSMM@0.227146,HUVEC@1.27291,K562@1.64871,MCF7@1.06204,NHEK@0.511336,NHLF@0.17187,SKNSHRA@0.580985, 0 0 0 0 ENSG00000246634.1 ENST00000499972.1 chr17:45132467-45177627 2 2078 43080 intergenic 1.30 0 1,1,1 1 0,0,0 0 0.682381615598886 0 48.3180943214629 5.25366759517177 125.26 112.567853705486 7.06996285979573 122.354 0 1 chimp,human,macaque, lincRNA lincRNA A549@4.81803,AG04450@9.19938,BJ@4.7668,GM12878@3.85224,H1HESC@3.386,HELAS3@4.24625,HEPG2@5.16249,HMEC@2.64659,HSMM@4.60114,HUVEC@6.53372,K562@6.19209,MCF7@2.45439,NHEK@3.26528,NHLF@4.70975,SKNSHRA@8.12894, 0 0 0 0 ENSG00000247683.1 ENST00000501005.1 chr17:45400564-45402367 2 1684 117 exonic 7.79 0 0,1,1 0 0,0,0 0 0 0 11.1698337292162 0 6.312 15.0095011876485 30.2222222222222 6.672 0 1 chimp,human,macaque,orangutan, lincRNA lincRNA A549@0.0832755,AG04450@0.031986,BJ@0.028807,GM12878@0.0753195,H1HESC@0.124268,HELAS3@0.08982,HEPG2@0.0749875,HMEC@0.004857,HSMM@0.005145,HUVEC@0.140597,K562@0.08207,MCF7@0.0525935,NHEK@0.00767167,NHLF@0,SKNSHRA@0.134061, 0 0 0 0 ENSG00000253347.1 ENST00000523101.1 chr17:45486688-45500892 2 511 13691 exonic 0 0 0,0,0 0 0,0,0 0 0 0 0 5.336133226207 18.326 0 6.12329267401943 231.639 0 0 cat,dog,horse,human,macaque,orangutan,panda,pig, antisense antisense A549@0.164116,AG04450@0.165585,BJ@0.077206,GM12878@0.421452,H1HESC@0.313716,HELAS3@0.45829,HEPG2@0.708206,HMEC@0.007982,HSMM@0.0084545,HUVEC@0.18653,K562@0.398508,MCF7@0.0315305,NHEK@0.075428,NHLF@0.0264135,SKNSHRA@0.355832, 0 0 0 0 ENSG00000234494.1 ENST00000451140.1 chr17:45975826-46018776 3 1036 41910 intronic -4.23 0 0,1,1 1 0,0,0 15.6872586872587 38.1953471725125 60.788 39.8861003861004 37.4582438558816 66.4 43.1167953667954 38.1426389883083 60.041 0 0 cat,chimp,cow,elephant,horse,human,macaque,marmoset,mouse,orangutan, antisense antisense A549@1.2868,AG04450@0.61727,BJ@0.6489,GM12878@0.518829,H1HESC@0.0916175,HELAS3@0.633749,HEPG2@0.50068,HMEC@0.725516,HSMM@0.586338,HUVEC@0.052311,K562@0.455097,MCF7@1.31029,NHEK@0.239924,NHLF@1.10251,SKNSHRA@0.721681, 0 0 0 0 ENSG00000234494.1 ENST00000433001.1 chr17:45976997-46018756 3 909 40846 intronic 5.85 0 0,1,1 1 0,0,0 17.3531353135314 39.114233951917 63.895 27.5544554455446 38.5753806982324 76.9 29.8602860286029 39.2205356705675 70.721 0 0 cat,chimp,elephant,horse,human,macaque,marmoset,mouse,orangutan,panda,pig,rabbit,rat, antisense antisense A549@1.2868,AG04450@0.61727,BJ@0.6489,GM12878@0.518829,H1HESC@0.0916175,HELAS3@0.633749,HEPG2@0.50068,HMEC@0.725516,HSMM@0.586338,HUVEC@0.052311,K562@0.455097,MCF7@1.31029,NHEK@0.239924,NHLF@1.10251,SKNSHRA@0.721681, 0 0 0 0 ENSG00000234494.1 ENST00000411573.1 chr17:45977123-46018725 3 763 40835 intronic 5.85 0 0,1,1 1 0,0,0 14.4089121887287 39.0603893718624 71.304 19.0655307994758 38.4443492102363 93.175 21.5766710353866 39.0872535814865 87.275 0 0 cat,chimp,elephant,horse,human,macaque,marmoset,mouse,orangutan,panda,pig,rabbit,rat, antisense antisense A549@1.2868,AG04450@0.61727,BJ@0.6489,GM12878@0.518829,H1HESC@0.0916175,HELAS3@0.633749,HEPG2@0.50068,HMEC@0.725516,HSMM@0.586338,HUVEC@0.052311,K562@0.455097,MCF7@1.31029,NHEK@0.239924,NHLF@1.10251,SKNSHRA@0.721681, 0 0 0 0 ENSG00000235300.1 ENST00000421610.1 chr17:46371707-46385191 2 668 12814 intronic 0.43 1 0,1,0 0 0,0,0 714.508982035928 77.2934290619635 456.59 836.146706586826 65.4552052442641 444.045 727.87125748503 66.2496488216014 367.615 0 0 cat,chimp,cow,dog,elephant,guinea_pig,horse,human,macaque,marmoset,mouse,opossum,orangutan,panda,pig,platypus,rabbit,rat, antisense antisense A549@0.286308,AG04450@0,BJ@0,GM12878@0.006997,H1HESC@0,HELAS3@0.0079225,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0.05092,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0.003392, 0 0 0 0 ENSG00000230148.2 ENST00000504972.1 chr17:46620913-46623449 2 678 1856 exonic 1.82 0 1,1,1 0 0,0,0 71.3569321533923 299.120689655172 149.47 90.1592920353982 318.865840517241 207.953 100.100294985251 297.62338362069 246.173 0 0 cat,chimp,cow,dog,elephant,horse,human,macaque,marmoset,mouse,orangutan,panda,pig,rabbit, antisense retained_intron A549@0.55563,AG04450@0.151369,BJ@0.233401,GM12878@0.158263,H1HESC@0,HELAS3@0.0061385,HEPG2@0,HMEC@0.295292,HSMM@0.641428,HUVEC@0.494248,K562@1.22237,MCF7@0.123796,NHEK@0.639399,NHLF@0.16281,SKNSHRA@0.414362, 0 0 0 0 ENSG00000230148.2 ENST00000435312.1 chr17:46621713-46628610 7 797 6088 exonic 3.79 1 1,1,1 0 0,0,0 347.741530740276 389.647831800263 113.988 357.284818067754 428.337549277267 156.477 357.850690087829 396.611202365309 173.176 0 0 chimp,cow,dog,elephant,human,macaque,marmoset,mouse,opossum,orangutan,panda,pig,rat, antisense antisense A549@0.55563,AG04450@0.151369,BJ@0.233401,GM12878@0.158263,H1HESC@0,HELAS3@0.0061385,HEPG2@0,HMEC@0.295292,HSMM@0.641428,HUVEC@0.494248,K562@1.22237,MCF7@0.123796,NHEK@0.639399,NHLF@0.16281,SKNSHRA@0.414362, 0 0 0 0 ENSG00000230148.2 ENST00000508688.1 chr17:46622871-46628438 5 409 5150 exonic 0 0 0,1,1 0 0,0,0 466.706601466993 368.374951456311 482.08 479.19315403423 407.687378640777 507.359 503.403422982885 374.780776699029 474.572 0 0 chimp,cow,dog,elephant,human,macaque,marmoset,mouse,opossum,orangutan,panda,pig,rabbit,rat, antisense antisense A549@0.55563,AG04450@0.151369,BJ@0.233401,GM12878@0.158263,H1HESC@0,HELAS3@0.0061385,HEPG2@0,HMEC@0.295292,HSMM@0.641428,HUVEC@0.494248,K562@1.22237,MCF7@0.123796,NHEK@0.639399,NHLF@0.16281,SKNSHRA@0.414362, 0 0 0 0 ENSG00000230148.2 ENST00000502764.1 chr17:46624054-46628579 5 542 3975 exonic 0 1 1,1,1 1 0,0,0 489.145756457565 412.088050314465 232.572 508.433579335793 468.893081761006 210.096 537.39667896679 424.088301886792 218.257 0 0 cat,chimp,cow,dog,elephant,horse,human,macaque,marmoset,mouse,opossum,orangutan,panda,pig,rabbit,rat, antisense antisense A549@0.55563,AG04450@0.151369,BJ@0.233401,GM12878@0.158263,H1HESC@0,HELAS3@0.0061385,HEPG2@0,HMEC@0.295292,HSMM@0.641428,HUVEC@0.494248,K562@1.22237,MCF7@0.123796,NHEK@0.639399,NHLF@0.16281,SKNSHRA@0.414362, 0 0 0 0 ENSG00000233101.4 ENST00000465846.1 chr17:46627247-46679694 3 416 52027 exonic -4.72 1 0,1,1 0 0,0,0 179.891826923077 177.975243623503 464.136 291.752403846154 213.778672612297 471.298 276.923076923077 199.706575431987 461.749 0 0 chimp,cow,dog,elephant,guinea_pig,horse,human,macaque,marmoset,mouse,opossum,orangutan,panda,pig,rat, antisense antisense A549@0.390516,AG04450@4.19953,BJ@0,GM12878@0.0667615,H1HESC@0,HELAS3@0.0085015,HEPG2@0,HMEC@0,HSMM@0.575334,HUVEC@0.0675635,K562@0.0715575,MCF7@0,NHEK@0.034465,NHLF@3.04944,SKNSHRA@0.0805585, 0 0 0 0 ENSG00000239552.1 ENST00000464382.1 chr17:46634624-46637409 2 557 2226 intronic 4.42 0 0,0,0 0 0,0,0 0 12.2619047619048 198.429 29.4075403949731 7.0314465408805 187.713 28.2854578096948 9.12848158131177 171.823 0 0 chimp,elephant,guinea_pig,human,macaque,marmoset,orangutan,rabbit, antisense antisense A549@0,AG04450@0.0176815,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0.002114,HUVEC@0,K562@0,MCF7@0,NHEK@0.002222,NHLF@0.02194,SKNSHRA@0, 0 0 0 0 ENSG00000233101.4 ENST00000476204.1 chr17:46667782-46679470 4 535 11147 intronic -1.78 0 0,1,0 0 0,0,0 246.955140186916 228.983941867767 205.625 284.682242990654 276.512693998385 239.145 257.420560747664 251.535300977842 231.632 0 0 chimp,cow,elephant,horse,human,macaque,marmoset,mouse,orangutan,pig,rabbit,rat, antisense antisense A549@0.390516,AG04450@4.19953,BJ@0,GM12878@0.0667615,H1HESC@0,HELAS3@0.0085015,HEPG2@0,HMEC@0,HSMM@0.575334,HUVEC@0.0675635,K562@0.0715575,MCF7@0,NHEK@0.034465,NHLF@3.04944,SKNSHRA@0.0805585, 0 0 0 0 ENSG00000233101.4 ENST00000474040.1 chr17:46667804-46679283 3 738 10737 intronic -1.78 0 0,1,0 0 0,0,0 204.838753387534 234.672999906864 219.375 266.867208672087 280.761478997858 255.601 226.253387533875 256.184688460464 248.836 0 0 cat,chimp,cow,dog,elephant,guinea_pig,horse,human,macaque,mouse,orangutan,panda,pig,rabbit,rat, antisense antisense A549@0.390516,AG04450@4.19953,BJ@0,GM12878@0.0667615,H1HESC@0,HELAS3@0.0085015,HEPG2@0,HMEC@0,HSMM@0.575334,HUVEC@0.0675635,K562@0.0715575,MCF7@0,NHEK@0.034465,NHLF@3.04944,SKNSHRA@0.0805585, 0 0 0 0 ENSG00000233101.4 ENST00000467155.1 chr17:46667839-46683764 3 501 15420 intronic 13.82 1 0,1,1 0 0,1,0 197.105788423154 212.604280155642 241.25 175.265469061876 250.818093385214 281.781 145.413173652695 229.54130998703 270.066 0 0 cat,chimp,cow,dog,elephant,horse,human,macaque,marmoset,orangutan,panda,pig,rabbit,rat, antisense antisense A549@0.390516,AG04450@4.19953,BJ@0,GM12878@0.0667615,H1HESC@0,HELAS3@0.0085015,HEPG2@0,HMEC@0,HSMM@0.575334,HUVEC@0.0675635,K562@0.0715575,MCF7@0,NHEK@0.034465,NHLF@3.04944,SKNSHRA@0.0805585, 0 0 0 0 ENSG00000233101.4 ENST00000480872.1 chr17:46667843-46679699 3 468 11384 intronic -4.72 1 1,1,1 0 0,0,0 308.333333333333 224.21679550246 243.75 361.100427350427 270.75606113844 284.773 325.760683760684 246.430955727337 271.41 0 0 chimp,cow,dog,elephant,guinea_pig,horse,human,macaque,mouse,opossum,orangutan,panda,pig,rabbit,rat, antisense antisense A549@0.390516,AG04450@4.19953,BJ@0,GM12878@0.0667615,H1HESC@0,HELAS3@0.0085015,HEPG2@0,HMEC@0,HSMM@0.575334,HUVEC@0.0675635,K562@0.0715575,MCF7@0,NHEK@0.034465,NHLF@3.04944,SKNSHRA@0.0805585, 0 0 0 0 ENSG00000233101.4 ENST00000429755.2 chr17:46669654-46679699 3 432 9609 exonic -4.72 1 0,1,1 0 0,0,0 279.777777777778 203.129461962743 454.779 388.585648148148 266.399209074826 384.543 373.840277777778 242.528150692059 351.609 0 0 chimp,cow,dog,elephant,guinea_pig,horse,human,macaque,mouse,opossum,orangutan,panda,pig,rabbit,rat, antisense antisense A549@0.390516,AG04450@4.19953,BJ@0,GM12878@0.0667615,H1HESC@0,HELAS3@0.0085015,HEPG2@0,HMEC@0,HSMM@0.575334,HUVEC@0.0675635,K562@0.0715575,MCF7@0,NHEK@0.034465,NHLF@3.04944,SKNSHRA@0.0805585, 0 0 0 0 ENSG00000233101.4 ENST00000492897.1 chr17:46669675-46679697 2 307 9713 exonic -3.74 1 0,0,1 0 0,0,0 262.964169381107 203.743951405333 458.496 329.768729641694 268.894986101102 386.727 311.99348534202 245.066920621847 355.053 0 0 chimp,cow,dog,elephant,guinea_pig,horse,human,macaque,mouse,opossum,orangutan,panda,pig,rabbit,rat, antisense antisense A549@0.390516,AG04450@4.19953,BJ@0,GM12878@0.0667615,H1HESC@0,HELAS3@0.0085015,HEPG2@0,HMEC@0,HSMM@0.575334,HUVEC@0.0675635,K562@0.0715575,MCF7@0,NHEK@0.034465,NHLF@3.04944,SKNSHRA@0.0805585, 0 0 0 0 ENSG00000233101.4 ENST00000487849.1 chr17:46669682-46683756 3 425 13645 exonic 13.82 1 0,0,1 0 0,1,0 131.007058823529 196.243679003298 459.735 150.141176470588 245.156320996702 387.455 139.329411764706 224.595822645658 356.201 0 0 cat,chimp,cow,dog,elephant,horse,human,macaque,marmoset,orangutan,panda,pig,rabbit,rat, antisense antisense A549@0.390516,AG04450@4.19953,BJ@0,GM12878@0.0667615,H1HESC@0,HELAS3@0.0085015,HEPG2@0,HMEC@0,HSMM@0.575334,HUVEC@0.0675635,K562@0.0715575,MCF7@0,NHEK@0.034465,NHLF@3.04944,SKNSHRA@0.0805585, 0 0 0 0 ENSG00000233101.4 ENST00000481995.1 chr17:46673320-46679694 3 520 5850 exonic -4.72 1 0,0,1 0 0,0,0 292.413461538462 154.684615384615 59.436 421.409615384615 212.585811965812 177.396 398.778846153846 186.33452991453 155.224 0 0 cat,chimp,cow,dog,elephant,guinea_pig,horse,human,macaque,mouse,opossum,orangutan,panda,pig,rabbit,rat, antisense antisense A549@0.390516,AG04450@4.19953,BJ@0,GM12878@0.0667615,H1HESC@0,HELAS3@0.0085015,HEPG2@0,HMEC@0,HSMM@0.575334,HUVEC@0.0675635,K562@0.0715575,MCF7@0,NHEK@0.034465,NHLF@3.04944,SKNSHRA@0.0805585, 0 0 0 0 ENSG00000233101.4 ENST00000460041.1 chr17:46673322-46679254 3 725 5203 exonic -1.61 0 0,0,1 0 0,0,0 177.506206896552 167.615798577744 60.372 293.662068965517 225.999615606381 178.82 268.928275862069 198.989429175476 156.612 0 0 cat,chimp,cow,dog,elephant,guinea_pig,horse,human,macaque,marmoset,mouse,orangutan,panda,pig,rabbit,rat, antisense antisense A549@0.390516,AG04450@4.19953,BJ@0,GM12878@0.0667615,H1HESC@0,HELAS3@0.0085015,HEPG2@0,HMEC@0,HSMM@0.575334,HUVEC@0.0675635,K562@0.0715575,MCF7@0,NHEK@0.034465,NHLF@3.04944,SKNSHRA@0.0805585, 0 0 0 0 ENSG00000233101.4 ENST00000474324.1 chr17:46673322-46679693 2 419 5950 exonic -4.72 1 0,0,1 0 0,0,0 296.491646778043 156.638487394958 60.372 397.520286396181 217.743529411765 178.82 374.384248210024 191.586386554622 156.612 0 0 chimp,cow,dog,elephant,guinea_pig,horse,human,macaque,mouse,opossum,orangutan,panda,pig,rabbit, antisense antisense A549@0.390516,AG04450@4.19953,BJ@0,GM12878@0.0667615,H1HESC@0,HELAS3@0.0085015,HEPG2@0,HMEC@0,HSMM@0.575334,HUVEC@0.0675635,K562@0.0715575,MCF7@0,NHEK@0.034465,NHLF@3.04944,SKNSHRA@0.0805585, 0 0 0 0 ENSG00000233101.4 ENST00000477144.1 chr17:46673342-46679700 4 739 5613 exonic -1.61 1 0,0,1 0 0,0,0 195.016238159675 161.215927311598 69.732 277.838971583221 221.561909852129 186.836 264.585926928281 193.933903438446 164.3 0 0 chimp,cow,elephant,horse,human,macaque,mouse,orangutan,pig,rabbit,rat, antisense antisense A549@0.390516,AG04450@4.19953,BJ@0,GM12878@0.0667615,H1HESC@0,HELAS3@0.0085015,HEPG2@0,HMEC@0,HSMM@0.575334,HUVEC@0.0675635,K562@0.0715575,MCF7@0,NHEK@0.034465,NHLF@3.04944,SKNSHRA@0.0805585, 0 0 0 0 ENSG00000233101.4 ENST00000466037.1 chr17:46673856-46683756 3 464 9432 exonic 13.82 1 0,1,1 0 0,1,0 156.409482758621 156.142811704835 250.752 192.189655172414 197.476781170483 376.383 185.226293103448 178.626590330789 321.915 0 0 cat,chimp,cow,dog,elephant,horse,human,macaque,marmoset,mouse,orangutan,panda,pig,rabbit,rat, antisense antisense A549@0.390516,AG04450@4.19953,BJ@0,GM12878@0.0667615,H1HESC@0,HELAS3@0.0085015,HEPG2@0,HMEC@0,HSMM@0.575334,HUVEC@0.0675635,K562@0.0715575,MCF7@0,NHEK@0.034465,NHLF@3.04944,SKNSHRA@0.0805585, 0 0 0 0 ENSG00000233101.4 ENST00000491264.1 chr17:46679500-46683756 3 475 3777 intronic 13.82 1 0,0,1 0 0,1,0 79.5557894736842 182.512046597829 32.8 107.562105263158 186.149854381784 97.974 88.2357894736842 174.337304739211 83.857 0 0 cat,chimp,cow,dog,elephant,horse,human,macaque,marmoset,orangutan,panda,pig,rabbit,rat, antisense antisense A549@0.390516,AG04450@4.19953,BJ@0,GM12878@0.0667615,H1HESC@0,HELAS3@0.0085015,HEPG2@0,HMEC@0,HSMM@0.575334,HUVEC@0.0675635,K562@0.0715575,MCF7@0,NHEK@0.034465,NHLF@3.04944,SKNSHRA@0.0805585, 0 0 0 0 ENSG00000233101.4 ENST00000494420.1 chr17:46679853-46683776 3 428 3491 intronic 13.82 1 0,0,1 0 0,1,0 67.1728971962617 185.306215983959 84.676 76.0981308411215 190.932111142939 134.588 60.0163551401869 179.165282154111 113.524 0 0 chimp,cow,dog,horse,human,macaque,marmoset,orangutan,panda,pig,rabbit, antisense antisense A549@0.390516,AG04450@4.19953,BJ@0,GM12878@0.0667615,H1HESC@0,HELAS3@0.0085015,HEPG2@0,HMEC@0,HSMM@0.575334,HUVEC@0.0675635,K562@0.0715575,MCF7@0,NHEK@0.034465,NHLF@3.04944,SKNSHRA@0.0805585, 0 0 0 0 ENSG00000248304.1 ENST00000510789.1 chr17:46694460-46699890 2 2189 3239 exonic 5.10 0 0,1,1 0 0,0,0 51.1379625399726 64.9607903673973 0 81.6879853814527 86.0793454769991 2.019 65.8698035632709 88.3210867551714 5.437 0 0 chimp,cow,dog,horse,human,macaque,marmoset,mouse,orangutan,panda,pig,rat, lincRNA lincRNA A549@0.011579,AG04450@0.00215,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0.0314415,SKNSHRA@0, 0 0 0 0 ENSG00000242207.1 ENST00000480386.1 chr17:46706037-46712294 2 564 5691 intergenic 2.18 0 0,1,0 0 0,0,0 0 79.5271481286241 121.41 0 85.7021613073273 181.043 0 73.3349147777192 155.012 0 0 chimp,cow,elephant,horse,human,macaque,marmoset,orangutan,panda, antisense antisense A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0.008442,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000242207.1 ENST00000462131.1 chr17:46706911-46712023 2 212 4898 intergenic 0 0 0,1,0 0 0,0,0 0 92.402817476521 12.593 15.8254716981132 96.8995508370764 35.56 15.9952830188679 81.7160065332789 37.402 0 0 cat,chimp,elephant,horse,human,macaque,marmoset,mouse,orangutan,panda,pig,rabbit,rat, antisense antisense A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0.008442,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000233283.1 ENST00000438772.1 chr17:46710869-46724152 3 592 12687 intergenic 0 0 0,1,1 0 0,1,0 212.261824324324 36.2824150705447 0 164.547297297297 37.7933317569165 38.887 136.307432432432 37.3015685347206 36.395 0 0 cat,chimp,cow,dog,elephant,guinea_pig,horse,human,macaque,marmoset,mouse,orangutan,pig,rabbit,rat, processed_transcript processed_transcript A549@0.635237,AG04450@0,BJ@0,GM12878@0.10534,H1HESC@0,HELAS3@0.113013,HEPG2@0.0346065,HMEC@0.039613,HSMM@0.0464355,HUVEC@0,K562@0.37106,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000233283.1 ENST00000433510.1 chr17:46713654-46724385 2 899 9830 intergenic 0 0 0,1,1 0 0,0,0 32.7997775305895 37.366022380468 0 30.4638487208009 42.5968463886063 33.449 28.3459399332592 42.6241098677518 32.996 0 0 cat,chimp,cow,dog,elephant,guinea_pig,horse,human,macaque,marmoset,mouse,orangutan,panda,pig,rabbit,rat, processed_transcript processed_transcript A549@0.635237,AG04450@0,BJ@0,GM12878@0.10534,H1HESC@0,HELAS3@0.113013,HEPG2@0.0346065,HMEC@0.039613,HSMM@0.0464355,HUVEC@0,K562@0.37106,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000233283.1 ENST00000429365.1 chr17:46713901-46716647 2 433 2311 intergenic 6.24 0 1,1,1 1 0,0,0 91.3418013856813 94.4699264387711 130.982 42.4434180138568 99.2795326698399 161.261 42.6997690531178 101.315015144959 151.989 0 0 cat,chimp,cow,dog,elephant,horse,human,macaque,marmoset,mouse,orangutan,panda,pig,rabbit,rat, processed_transcript processed_transcript A549@0.635237,AG04450@0,BJ@0,GM12878@0.10534,H1HESC@0,HELAS3@0.113013,HEPG2@0.0346065,HMEC@0.039613,HSMM@0.0464355,HUVEC@0,K562@0.37106,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000233283.1 ENST00000425510.1 chr17:46713908-46716472 3 376 2184 intergenic 19.62 0 0,1,1 0 0,0,0 78.4228723404255 99.96336996337 141.046 56.563829787234 103.729395604396 161.261 57.0186170212766 105.855769230769 151.989 0 0 cat,chimp,cow,dog,elephant,horse,human,macaque,marmoset,mouse,orangutan,panda,pig,rat, processed_transcript processed_transcript A549@0.635237,AG04450@0,BJ@0,GM12878@0.10534,H1HESC@0,HELAS3@0.113013,HEPG2@0.0346065,HMEC@0.039613,HSMM@0.0464355,HUVEC@0,K562@0.37106,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000244649.1 ENST00000478824.1 chr17:46782565-46784708 2 1434 707 intergenic 1.83 0 0,0,0 0 0,0,0 0 0 16.616 4.89400278940028 0 48.662 4.86331938633194 0 49.398 0 0 chimp,elephant,horse,human,macaque,marmoset,orangutan, antisense antisense A549@4.11351,AG04450@0,BJ@0.003429,GM12878@1.30381,H1HESC@0.036534,HELAS3@0.0015735,HEPG2@0.0029675,HMEC@0.002851,HSMM@0.18377,HUVEC@0.001693,K562@0.0034205,MCF7@0.052125,NHEK@0.000919333,NHLF@0.0065965,SKNSHRA@0, 0 0 0 0 ENSG00000244649.1 ENST00000492522.1 chr17:46782623-46783692 2 693 374 intergenic -0.11 0 0,0,0 0 0,0,0 0 0 16.616 0 0 48.662 0 0 49.398 0 0 chimp,elephant,horse,human,macaque,marmoset,orangutan, antisense antisense A549@4.11351,AG04450@0,BJ@0.003429,GM12878@1.30381,H1HESC@0.036534,HELAS3@0.0015735,HEPG2@0.0029675,HMEC@0.002851,HSMM@0.18377,HUVEC@0.001693,K562@0.0034205,MCF7@0.052125,NHEK@0.000919333,NHLF@0.0065965,SKNSHRA@0, 0 0 0 0 ENSG00000229637.2 ENST00000422730.2 chr17:46800530-46802819 2 1274 1013 exonic 12.89 0 0,1,1 0 0,0,0 0 0 10.794 10.1279434850863 1.76209279368213 12.584 14.0510204081633 1.83119447186575 13.732 0 0 chimp,cow,elephant,human,macaque,orangutan, antisense antisense A549@0,AG04450@0.0018455,BJ@0.0882705,GM12878@0,H1HESC@0.0049095,HELAS3@0.0157975,HEPG2@0,HMEC@0,HSMM@0.0016125,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0.001529,SKNSHRA@0, 0 0 0 0 ENSG00000229637.2 ENST00000432056.1 chr17:46801054-46802113 2 502 555 intergenic 12.89 1 1,1,1 0 0,0,0 0 0 10.794 25.703187250996 3.21621621621622 10.743 29.2868525896414 3.34234234234234 13.083 0 0 cat,chimp,cow,dog,elephant,horse,human,macaque,marmoset,orangutan,panda,pig, antisense antisense A549@0,AG04450@0.0018455,BJ@0.0882705,GM12878@0,H1HESC@0.0049095,HELAS3@0.0157975,HEPG2@0,HMEC@0,HSMM@0.0016125,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0.001529,SKNSHRA@0, 0 0 0 0 ENSG00000242407.1 ENST00000495536.1 chr17:46810453-46811250 2 530 265 intergenic 1.07 0 0,0,0 0 0,0,0 27.9584905660377 335.501886792453 8.126 31.9358490566038 249.728301886792 12.243 33.3396226415094 234.090566037736 12.772 0 0 chimp,elephant,horse,human,macaque,marmoset,orangutan,rabbit, antisense antisense A549@0.0507155,AG04450@0.022259,BJ@0.156269,GM12878@0.009983,H1HESC@0,HELAS3@0.015692,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0.057702,NHEK@0,NHLF@0,SKNSHRA@0.051927, 0 0 0 0 ENSG00000230532.1 ENST00000435491.1 chr17:47009153-47014462 3 480 4825 exonic -12.40 0 0,0,1 0 0,0,0 176.445833333333 25.4574093264249 42.291 244.264583333333 24.7703626943005 40.914 235.03125 21.3879792746114 46.71 0 0 cat,chimp,cow,dog,elephant,horse,human,macaque,marmoset,mouse,orangutan,panda,rabbit,rat, antisense antisense A549@0.701623,AG04450@0.31464,BJ@0.38707,GM12878@1.45883,H1HESC@0.461524,HELAS3@0.954085,HEPG2@2.20776,HMEC@0.076297,HSMM@0.0624975,HUVEC@0.914397,K562@0.399996,MCF7@2.03293,NHEK@0.827311,NHLF@0.0640975,SKNSHRA@1.34773, 0 0 0 0 ENSG00000250838.1 ENST00000505903.1 chr17:47072628-47074854 3 425 1797 exonic -4.33 0 0,1,1 0 0,0,0 218.912941176471 178.735670562048 291.708 182.489411764706 201.244296048971 282.197 169.830588235294 200.736227045075 919.275 0 0 cat,chimp,cow,dog,elephant,horse,human,macaque,marmoset,mouse,orangutan,panda,rat, antisense antisense A549@1.43071,AG04450@0.0180075,BJ@0,GM12878@0.00942,H1HESC@2.3013,HELAS3@0.472948,HEPG2@0.841068,HMEC@0,HSMM@0,HUVEC@0.0686965,K562@1.81962,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000251461.1 ENST00000504865.1 chr17:47082093-47091087 4 428 8560 intronic -3.04 0 0,0,0 0 0,0,0 148.158878504673 20.6130841121495 88.582 238.420560747664 21.2559579439252 90.271 252.327102803738 25.8473130841121 80.843 0 0 dog,horse,human,macaque,marmoset,orangutan,panda, antisense antisense A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0.005728,HELAS3@0,HEPG2@0.009864,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000177369.4 ENST00000322227.2 chr17:47325601-47333811 4 2313 5891 intergenic 3.25 0 0,0,0 0 0,1,0 0 9.89594296384315 0 9.16126242974492 14.3748090307248 0 9.46692607003891 13.8139534883721 0 0 1 chimp,human,orangutan, lincRNA lincRNA A549@0,AG04450@0.0009675,BJ@0,GM12878@0.03442,H1HESC@0.0459235,HELAS3@0.048157,HEPG2@0.054995,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0.0082905,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000177369.4 ENST00000511008.1 chr17:47325605-47336024 3 716 9699 intergenic -3.81 1 0,0,0 0 0,1,0 0 6.01061965151047 0 29.5949720670391 8.73100319620579 0 33.1145251396648 8.39034952056913 0 0 0 cat,chimp,dog,elephant,horse,human,macaque,marmoset,orangutan,panda,rat, lincRNA lincRNA A549@0,AG04450@0.0009675,BJ@0,GM12878@0.03442,H1HESC@0.0459235,HELAS3@0.048157,HEPG2@0.054995,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0.0082905,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000177369.4 ENST00000502951.1 chr17:47325618-47330056 2 494 3942 intergenic -3.81 0 0,0,0 0 0,1,0 0 14.7886859462202 0 42.8947368421053 20.4469812278031 0 44.3259109311741 19.5682394723491 0 0 0 cat,chimp,dog,elephant,human,macaque,marmoset,mouse,orangutan,panda,rabbit,rat, lincRNA retained_intron A549@0,AG04450@0.0009675,BJ@0,GM12878@0.03442,H1HESC@0.0459235,HELAS3@0.048157,HEPG2@0.054995,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0.0082905,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000248714.2 ENST00000502823.1 chr17:47438527-47443477 3 542 4404 intronic 3.84 0 0,1,1 0 0,0,0 49.3874538745387 120.05676657584 65.87 13.570110701107 128.30472297911 99.436 7.98708487084871 113.801544050863 78.571 0 0 chimp,elephant,horse,human,macaque,marmoset,orangutan,panda,rabbit, lincRNA lincRNA A549@0.0439745,AG04450@0.053447,BJ@0.0780435,GM12878@0.246587,H1HESC@0.0289725,HELAS3@0.20008,HEPG2@0.119396,HMEC@0.007513,HSMM@0.106767,HUVEC@0.206579,K562@0.0271125,MCF7@0.011067,NHEK@0,NHLF@0.325555,SKNSHRA@0.102705, 0 0 0 0 ENSG00000248714.2 ENST00000510360.2 chr17:47438551-47447360 3 301 8504 intronic 0 0 0,1,0 0 0,0,0 69.3056478405316 62.1742709313264 77.342 123.568106312292 67.3497177798683 104.336 116.12292358804 59.8620649106303 83.233 1 1 chimp,human,macaque,marmoset,orangutan, lincRNA lincRNA A549@0.0439745,AG04450@0.053447,BJ@0.0780435,GM12878@0.246587,H1HESC@0.0289725,HELAS3@0.20008,HEPG2@0.119396,HMEC@0.007513,HSMM@0.106767,HUVEC@0.206579,K562@0.0271125,MCF7@0.011067,NHEK@0,NHLF@0.325555,SKNSHRA@0.102705, 0 0 0 0 ENSG00000248714.2 ENST00000507337.1 chr17:47439744-47443454 3 598 3108 exonic 3.84 0 0,1,1 0 0,0,0 120.326086956522 5.9494851994852 361.216 91.505016722408 24.8610038610039 406.981 69.8846153846154 27.1518661518662 347.525 0 0 chimp,elephant,human,macaque,marmoset,orangutan, lincRNA lincRNA A549@0.0439745,AG04450@0.053447,BJ@0.0780435,GM12878@0.246587,H1HESC@0.0289725,HELAS3@0.20008,HEPG2@0.119396,HMEC@0.007513,HSMM@0.106767,HUVEC@0.206579,K562@0.0271125,MCF7@0.011067,NHEK@0,NHLF@0.325555,SKNSHRA@0.102705, 0 0 0 0 ENSG00000250948.1 ENST00000511322.1 chr17:47452742-47457456 2 243 4469 intergenic 0 0 0,0,0 0 0,0,0 0 0 0 21.4074074074074 4.56724099351085 0 42.0740740740741 7.02125755202506 0 0 0 chimp,elephant,horse,human,orangutan,panda, antisense antisense A549@0.01267,AG04450@0.045742,BJ@0.0347015,GM12878@0.169223,H1HESC@0,HELAS3@0.104935,HEPG2@0.0088805,HMEC@0.016713,HSMM@0.0447095,HUVEC@0,K562@0.009477,MCF7@0.041588,NHEK@0.0534697,NHLF@0,SKNSHRA@0.0371065, 0 0 0 0 ENSG00000250186.3 ENST00000506504.3 chr17:47481443-47482559 2 961 153 exonic 2.52 0 1,1,1 0 0,0,0 183.22372528616 77.2287581699346 21.073 175.96878251821 40.6470588235294 21.314 169.936524453694 24.8627450980392 22.441 0 0 cat,chimp,cow,dog,elephant,horse,human,macaque,marmoset,mouse,orangutan,panda,pig,rabbit,rat, antisense antisense A549@0.073211,AG04450@0.0526215,BJ@0.0498565,GM12878@0.0111305,H1HESC@0.0152385,HELAS3@0.02864,HEPG2@0.0202475,HMEC@0.008504,HSMM@0.0047345,HUVEC@0,K562@0.0323195,MCF7@0.049715,NHEK@0.0264513,NHLF@0,SKNSHRA@0.040093, 0 0 0 0 ENSG00000249497.1 ENST00000509950.1 chr17:47535223-47539111 3 1751 2133 intergenic 7.89 0 0,0,1 0 0,0,0 0 7.11673699015471 0 6.51399200456882 2.40506329113924 0 6.66704740148487 4.75855602437881 0 0 0 cat,chimp,cow,dog,human,macaque, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0.008718,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000249906.1 ENST00000514506.1 chr17:47583019-47651426 3 1218 67185 exonic 11.14 0 0,0,0 0 0,0,0 148.167487684729 17.7213812606981 224.302 129.796387520525 27.2757311899978 151.838 128.47619047619 28.9802634516633 154.954 0 0 chimp,elephant,guinea_pig,human,macaque,marmoset,orangutan,pig, antisense antisense A549@0.002762,AG04450@0,BJ@0,GM12878@0,H1HESC@0.046414,HELAS3@0.0269645,HEPG2@0.004468,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0.00104533,NHLF@0,SKNSHRA@0.001858, 0 0 0 0 ENSG00000250310.1 ENST00000503624.1 chr17:47622209-47655324 2 575 32538 intronic 2.64 0 1,1,1 0 0,0,0 0 33.553414469236 233.84 0 31.518778044133 193.767 0 29.1848300448706 135.553 0 0 chimp,elephant,horse,human,macaque,marmoset,orangutan,panda, antisense antisense A549@0,AG04450@0,BJ@0,GM12878@0.0162495,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000250751.1 ENST00000512720.1 chr17:47785696-47797422 2 573 11151 exonic 6.34 0 0,0,0 0 0,0,0 112.251308900524 68.0327324903596 112.32 166.698080279232 74.0421486862165 176.886 128.314136125654 68.7029862792575 167.088 0 0 chimp,cow,dog,elephant,horse,human,macaque,marmoset,mouse,orangutan,panda,rabbit,rat, antisense antisense A549@0.00755,AG04450@0.029641,BJ@0.084953,GM12878@0.023091,H1HESC@0,HELAS3@0.019134,HEPG2@0.0797125,HMEC@0,HSMM@0.045548,HUVEC@0.0846575,K562@0.012814,MCF7@0.08748,NHEK@0.002296,NHLF@0.0033555,SKNSHRA@0.106173, 0 0 0 0 ENSG00000204584.1 ENST00000376609.1 chr17:47923272-47926199 3 2097 826 exonic 2.12 0 0,0,0 0 0,1,1 8.27849308536004 11.864406779661 0 29.5097758702909 0 4.71 31.8302336671435 1.4225181598063 11.741 0 0 chimp,elephant,human,orangutan, antisense antisense A549@0.538337,AG04450@0.117205,BJ@0.246708,GM12878@0.415585,H1HESC@0.723296,HELAS3@0.509776,HEPG2@0.686414,HMEC@0.042896,HSMM@0.147925,HUVEC@1.77799,K562@0.299451,MCF7@0.373028,NHEK@0.263869,NHLF@0.057182,SKNSHRA@0.412334, 0 0 0 0 ENSG00000248954.1 ENST00000515692.1 chr17:47964961-47978257 5 1811 11477 intergenic 7.46 0 0,0,0 0 0,0,0 90.7255659856433 26.8046527838285 49.026 110.096631695196 30.4566524353054 52.137 107.300386526781 33.7332055415178 60.997 0 0 chimp,cow,elephant,horse,human,macaque,marmoset,orangutan,rabbit, lincRNA processed_transcript A549@0.016123,AG04450@0,BJ@0.007128,GM12878@0.00111,H1HESC@0.049542,HELAS3@0.00752,HEPG2@0.0135185,HMEC@0,HSMM@0.0012555,HUVEC@0.0048655,K562@0,MCF7@0.489057,NHEK@0.0142213,NHLF@0,SKNSHRA@0.006125, 0 0 0 0 ENSG00000254039.1 ENST00000518420.1 chr17:47991767-48010282 3 392 18119 intergenic -2.21 0 0,0,0 0 0,0,0 8.57142857142857 35.4616700700922 53.76 55.4311224489796 43.8817263645897 8.477 60.3673469387755 42.7139466857994 9.456 0 1 chimp,human,marmoset, lincRNA lincRNA A549@0.012488,AG04450@0,BJ@0,GM12878@0.0148075,H1HESC@0,HELAS3@0.017161,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0.041338,NHEK@0.0583687,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000248172.1 ENST00000511867.1 chr17:48074253-48094208 2 584 19369 intergenic -2.56 0 0,0,1 0 0,0,0 8.41438356164384 3.9517269864216 0 13.7688356164384 8.20889049512107 8.472 18.5256849315068 8.98094893902628 8.376 1 1 chimp,human,macaque,marmoset,orangutan, antisense antisense A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0.018116,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0.0035085,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000246640.1 ENST00000499842.1 chr17:48127713-48133103 3 2530 2856 intergenic 8.67 0 1,1,1 1 0,0,0 0 18.1372549019608 142.251 7.54703557312253 37.233893557423 211.259 7.82806324110672 36.8207282913165 188.219 0 0 chimp,human,marmoset,orangutan,pig, lincRNA processed_transcript A549@0.329206,AG04450@0.0652715,BJ@0.141125,GM12878@0.02134,H1HESC@0.022052,HELAS3@0.164374,HEPG2@0.077741,HMEC@0.151952,HSMM@0.139468,HUVEC@0.0148185,K562@0.002114,MCF7@0.0852415,NHEK@0.339413,NHLF@0.014516,SKNSHRA@0.245049, 0 0 0 0 ENSG00000250282.1 ENST00000511361.1 chr17:48178068-48179284 2 428 786 intronic -1.65 0 0,0,0 0 0,0,0 0 0 0 0 0 3.472 0 0 3.626 1 1 chimp,human,macaque,marmoset,orangutan, antisense antisense A549@0,AG04450@0,BJ@0,GM12878@0.012351,H1HESC@0,HELAS3@0.258955,HEPG2@0.431557,HMEC@0,HSMM@0.0053015,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0.100884, 0 0 0 0 ENSG00000108819.9 ENST00000316878.6 chr17:48211104-48227877 12 4031 12720 intergenic 370.14 0 0,1,1 0 0,1,1 404.913420987348 40.2400157232704 362.894 444.397668072439 30.7688679245283 281.739 424.396675762838 28.8764937106918 267.377 0 0 chimp,cow,dog,guinea_pig,horse,human,marmoset,mouse,orangutan,panda,pig, antisense antisense A549@5.43486,AG04450@5.90376,BJ@7.33502,GM12878@10.545,H1HESC@1.98178,HELAS3@6.05352,HEPG2@4.90805,HMEC@5.09601,HSMM@6.18493,HUVEC@6.65742,K562@4.34478,MCF7@6.27023,NHEK@5.71906,NHLF@8.59765,SKNSHRA@8.17533, 0 0 0 0 ENSG00000108819.9 ENST00000501501.2 chr17:48211105-48227991 10 4148 12720 intergenic 147.83 0 0,1,1 0 0,1,1 413.775072324012 40.2400157232704 281.27 441.169720347155 30.7688679245283 249.835 420.755303760849 28.8764937106918 239.359 0 0 chimp,cow,dog,guinea_pig,human,marmoset,mouse,orangutan,panda,pig, antisense antisense A549@5.43486,AG04450@5.90376,BJ@7.33502,GM12878@10.545,H1HESC@1.98178,HELAS3@6.05352,HEPG2@4.90805,HMEC@5.09601,HSMM@6.18493,HUVEC@6.65742,K562@4.34478,MCF7@6.27023,NHEK@5.71906,NHLF@8.59765,SKNSHRA@8.17533, 0 0 0 0 ENSG00000236472.1 ENST00000451776.1 chr17:48212951-48223541 4 464 10120 intergenic 1.66 0 0,1,1 0 0,0,0 89.7047413793103 47.4661067193676 207.258 202.67025862069 61.3904150197628 286.251 196.717672413793 63.0883399209486 233.912 0 0 chimp,cow,dog,elephant,guinea_pig,human,macaque,marmoset,pig,platypus,rabbit, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0.0283705,H1HESC@0.0044325,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0.11075, 0 0 0 0 ENSG00000108819.9 ENST00000513579.1 chr17:48216825-48222517 5 650 5034 intergenic 21.72 0 0,0,1 0 0,1,1 309.553846153846 24.8496225665475 77.995 458.836923076923 95.8734604688121 80.603 458.970769230769 94.2767183154549 77.016 0 0 cat,chimp,cow,dog,elephant,guinea_pig,horse,human,macaque,marmoset,mouse,opossum,orangutan,panda,pig,rabbit,rat, antisense antisense A549@5.43486,AG04450@5.90376,BJ@7.33502,GM12878@10.545,H1HESC@1.98178,HELAS3@6.05352,HEPG2@4.90805,HMEC@5.09601,HSMM@6.18493,HUVEC@6.65742,K562@4.34478,MCF7@6.27023,NHEK@5.71906,NHLF@8.59765,SKNSHRA@8.17533, 0 0 0 0 ENSG00000253730.1 ENST00000523083.1 chr17:48235694-48238637 2 545 2396 intergenic -1.40 0 0,0,1 0 0,0,0 0 7.86644407345576 28.832 0 41.8998330550918 29.647 0 44.0596828046745 37.203 0 0 cat,cow,human,macaque,orangutan,panda, antisense antisense A549@0.05122,AG04450@0.080469,BJ@0.0358535,GM12878@0.124996,H1HESC@0.0764445,HELAS3@0.120644,HEPG2@0.0138685,HMEC@0.022457,HSMM@0,HUVEC@0.0255575,K562@0.026609,MCF7@0.0518735,NHEK@0,NHLF@0.0212045,SKNSHRA@0.60036, 0 0 0 0 ENSG00000249406.1 ENST00000509943.1 chr17:48286333-48291820 5 834 4645 intergenic 1.04 0 0,1,0 0 0,0,0 41.4172661870504 49.9231431646932 0 23.6426858513189 42.0932185145318 0 23.3225419664269 42.1272335844995 0 0 0 chimp,cow,horse,human,macaque,marmoset,orangutan, lincRNA lincRNA A549@0.011759,AG04450@0.0301995,BJ@0.286375,GM12878@0,H1HESC@0.961116,HELAS3@0.0063265,HEPG2@0.0076185,HMEC@0,HSMM@0.0323395,HUVEC@0,K562@0.453602,MCF7@0,NHEK@0.009233,NHLF@0.0785285,SKNSHRA@0.223616, 0 0 0 0 ENSG00000251085.1 ENST00000514468.1 chr17:48292055-48292781 3 452 270 intergenic 0.54 0 0,0,1 0 0,0,0 0 0 0 4.38938053097345 0 0 4.44247787610619 0 0 0 1 chimp,human,macaque,orangutan, lincRNA lincRNA A549@0.025153,AG04450@0.143541,BJ@0.181477,GM12878@0,H1HESC@0.754533,HELAS3@0.011666,HEPG2@0,HMEC@0,HSMM@0.047661,HUVEC@0,K562@0.579127,MCF7@0,NHEK@0.00561133,NHLF@0.136417,SKNSHRA@0.159783, 0 0 0 0 ENSG00000251179.1 ENST00000508851.1 chr17:48358938-48365216 4 746 5526 intergenic 5.31 1 0,1,1 0 0,0,0 0 0 0 3.69973190348525 0.646036916395223 0 3.80697050938338 2.59681505609844 0 0 0 chimp,dog,human,macaque,marmoset,orangutan,panda, antisense antisense A549@0.180511,AG04450@0.167496,BJ@0.129472,GM12878@0.010751,H1HESC@0.002766,HELAS3@0.913953,HEPG2@0.017389,HMEC@0,HSMM@0.020388,HUVEC@0.015146,K562@0.019829,MCF7@0,NHEK@0.0409207,NHLF@0.0723535,SKNSHRA@0.0635695, 0 0 0 0 ENSG00000249144.1 ENST00000503118.1 chr17:48452420-48453244 2 419 403 exonic -2.66 0 0,1,0 0 0,0,0 35.3651551312649 0 76.536 49.4677804295943 55.6749379652605 56.146 66.2482100238663 56.1116625310174 76.519 0 0 cat,chimp,cow,elephant,guinea_pig,horse,human,macaque,marmoset,mouse,opossum,orangutan,panda,pig,rat, antisense antisense A549@0.213482,AG04450@0.210928,BJ@0.016997,GM12878@0.255473,H1HESC@0.0279435,HELAS3@0.132744,HEPG2@0.081085,HMEC@0.029178,HSMM@0.138429,HUVEC@0.0166035,K562@0.137783,MCF7@0.109334,NHEK@0.0156583,NHLF@0.0693655,SKNSHRA@0.104496, 0 0 0 0 ENSG00000253102.1 ENST00000511627.1 chr17:48473799-48475249 2 713 735 exonic 18.92 0 0,1,0 0 0,0,0 107.754558204769 12.2585034013605 0 155.565217391304 57.3102040816327 2.7 153.479663394109 54.8258503401361 2.7 0 0 cat,chimp,cow,dog,elephant,guinea_pig,horse,human,macaque,orangutan,panda,pig, antisense antisense A549@0.0060715,AG04450@0.0283055,BJ@0.089563,GM12878@0,H1HESC@0.011042,HELAS3@0.0233515,HEPG2@0.0081955,HMEC@0.292064,HSMM@0.0790535,HUVEC@0.016649,K562@0.003435,MCF7@0.0028755,NHEK@0.0680367,NHLF@0.135841,SKNSHRA@0.012704, 0 0 0 0 ENSG00000248380.1 ENST00000507161.1 chr17:48553180-48555752 2 2523 47 intergenic -0.35 0 0,1,1 0 0,0,0 0 0 0 3.08838684106223 0 19.181 3.2849782005549 0 20.873 0 1 chimp,human,macaque, antisense antisense A549@0.0254165,AG04450@0.0168325,BJ@0.0058505,GM12878@0.0170585,H1HESC@0.0070615,HELAS3@0.0322895,HEPG2@0.0305045,HMEC@0,HSMM@0,HUVEC@0,K562@0.0294265,MCF7@0.0156635,NHEK@0,NHLF@0,SKNSHRA@0.034787, 0 0 0 0 ENSG00000249451.1 ENST00000502300.1 chr17:48580773-48585689 2 347 4567 intergenic -2.40 0 0,1,1 0 0,0,0 0 8.7129406612656 0 0 2.18130063499015 35.815 0 2.83577841033501 36.267 1 1 chimp,human,macaque,marmoset,orangutan, antisense antisense A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0.0289185,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0.00731533,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000250286.1 ENST00000513017.1 chr17:48614655-48616115 3 604 852 exonic -1.45 0 0,0,1 0 0,0,0 22.4668874172185 10.7981220657277 0 59.364238410596 11.0539906103286 106.719 58.8973509933775 19.656103286385 100.708 0 0 cat,chimp,cow,dog,elephant,guinea_pig,horse,human,macaque,marmoset,orangutan,pig,rabbit, antisense antisense A549@0.380258,AG04450@0.045535,BJ@0.141665,GM12878@0.017191,H1HESC@0.0979055,HELAS3@0.361523,HEPG2@0.260125,HMEC@0,HSMM@0.009744,HUVEC@0.024614,K562@0.0188665,MCF7@0,NHEK@0.00736533,NHLF@0.0054985,SKNSHRA@1.09871, 0 0 0 0 ENSG00000250286.1 ENST00000509260.1 chr17:48614660-48615801 2 715 424 exonic -1.45 0 0,0,1 0 0,0,0 32.1678321678322 0 0 63.9272727272727 0 106.719 73.972027972028 0 98.532 0 0 cat,chimp,cow,dog,elephant,guinea_pig,horse,human,marmoset,orangutan,pig,rabbit, antisense retained_intron A549@0.380258,AG04450@0.045535,BJ@0.141665,GM12878@0.017191,H1HESC@0.0979055,HELAS3@0.361523,HEPG2@0.260125,HMEC@0,HSMM@0.009744,HUVEC@0.024614,K562@0.0188665,MCF7@0,NHEK@0.00736533,NHLF@0.0054985,SKNSHRA@1.09871, 0 0 0 0 ENSG00000250107.1 ENST00000505793.1 chr17:48633568-48639469 2 1431 4468 intronic 5.20 1 0,1,0 0 0,0,0 69.5856044723969 141.066696508505 216.06 101.313067784766 196.742837958818 163.461 80.4535290006988 172.309534467323 162.338 0 0 cat,chimp,dog,elephant,horse,human,macaque,marmoset,mouse,orangutan,panda,pig,rabbit,rat, lincRNA processed_transcript A549@0.034421,AG04450@0.009664,BJ@0.009566,GM12878@0,H1HESC@0.150791,HELAS3@0.0053025,HEPG2@0.0095175,HMEC@0,HSMM@0.001591,HUVEC@0,K562@0,MCF7@0,NHEK@0.001319,NHLF@0.0608275,SKNSHRA@0.0443155, 0 0 0 0 ENSG00000250107.1 ENST00000505495.1 chr17:48633965-48636811 2 999 1845 intergenic -2.19 0 0,1,1 0 0,0,0 65.1001001001001 34.0536585365854 17.065 42.1911911911912 37.1463414634146 35.416 37.986986986987 35.0672086720867 34.555 0 0 cat,chimp,cow,dog,horse,human,macaque,marmoset,mouse,panda,pig,rabbit,rat, lincRNA processed_transcript A549@0.034421,AG04450@0.009664,BJ@0.009566,GM12878@0,H1HESC@0.150791,HELAS3@0.0053025,HEPG2@0.0095175,HMEC@0,HSMM@0.001591,HUVEC@0,K562@0,MCF7@0,NHEK@0.001319,NHLF@0.0608275,SKNSHRA@0.0443155, 0 0 0 0 ENSG00000250107.1 ENST00000508920.1 chr17:48634535-48636771 2 366 1868 intergenic 0 0 0,1,0 0 0,0,0 0 33.6343683083512 12.19 0 36.6889721627409 21.776 0 34.6354389721627 21.457 0 0 cat,chimp,elephant,horse,human,macaque,marmoset,panda,pig, lincRNA processed_transcript A549@0.034421,AG04450@0.009664,BJ@0.009566,GM12878@0,H1HESC@0.150791,HELAS3@0.0053025,HEPG2@0.0095175,HMEC@0,HSMM@0.001591,HUVEC@0,K562@0,MCF7@0,NHEK@0.001319,NHLF@0.0608275,SKNSHRA@0.0443155, 0 0 0 0 ENSG00000250976.1 ENST00000513378.1 chr17:48640564-48641144 2 154 424 intronic 0 0 0,1,1 0 0,0,0 0 0 68.574 45.1363636363636 10.9056603773585 226.586 41.6883116883117 11.1320754716981 224.001 0 0 chimp,human,macaque,marmoset,orangutan,pig, antisense antisense A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000251239.1 ENST00000502435.1 chr17:48704393-48709301 2 508 4398 exonic -0.59 1 0,0,0 0 0,0,0 409.858267716535 75.5716234652115 0 328.647637795276 72.5075034106412 0 319.11811023622 74.2307867212369 0 0 0 cat,chimp,dog,elephant,horse,human,macaque,marmoset,orangutan,panda,pig,rabbit,rat, antisense antisense A549@0.212972,AG04450@0,BJ@0,GM12878@0.135313,H1HESC@0,HELAS3@0.0045825,HEPG2@0,HMEC@0,HSMM@0.0609525,HUVEC@0,K562@0,MCF7@0.008063,NHEK@0.020184,NHLF@0,SKNSHRA@0.0445335, 0 0 0 0 ENSG00000167117.3 ENST00000300458.1 chr17:48838390-48844879 3 2760 3725 intergenic 5.99 0 1,1,1 0 0,0,0 37.0478260869565 0.333422818791946 0 15.8148550724638 147.221744966443 2.104 49.6579710144928 1.06630872483221 2.008 0 0 cat,chimp,human,macaque, lincRNA processed_transcript A549@0.043008,AG04450@0,BJ@0,GM12878@0,H1HESC@0.003096,HELAS3@0,HEPG2@0.0046595,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0.0266195,NHEK@0,NHLF@0,SKNSHRA@0.002958, 0 0 0 0 ENSG00000167117.3 ENST00000450727.1 chr17:48838535-48844877 4 682 5654 intergenic 8.47 0 0,1,0 0 0,0,0 97.1260997067449 6.51574106827025 0 38.3797653958944 100.016448532013 2.104 162.33431085044 5.273788468341 2.008 0 0 chimp,cow,dog,human,macaque,marmoset,mouse,orangutan,rat, lincRNA processed_transcript A549@0.043008,AG04450@0,BJ@0,GM12878@0,H1HESC@0.003096,HELAS3@0,HEPG2@0.0046595,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0.0266195,NHEK@0,NHLF@0,SKNSHRA@0.002958, 0 0 0 0 ENSG00000167117.3 ENST00000502517.1 chr17:48840212-48844918 3 937 3765 intergenic 3.66 0 0,1,1 0 0,0,0 72.4610458911419 9.45498007968128 0 25.0277481323372 5.06666666666667 2.104 83.7513340448239 7.39814077025232 2.008 0 0 chimp,guinea_pig,human,macaque,marmoset,orangutan, lincRNA processed_transcript A549@0.043008,AG04450@0,BJ@0,GM12878@0,H1HESC@0.003096,HELAS3@0,HEPG2@0.0046595,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0.0266195,NHEK@0,NHLF@0,SKNSHRA@0.002958, 0 0 0 0 ENSG00000167117.3 ENST00000419688.1 chr17:48842140-48844878 4 554 2178 intergenic 5.99 0 0,1,0 0 0,0,0 0 0 0 0.895306859205776 0.910927456382002 2.104 0.906137184115523 0.921946740128558 2.008 0 0 chimp,dog,horse,human,macaque,marmoset,orangutan, lincRNA processed_transcript A549@0.043008,AG04450@0,BJ@0,GM12878@0,H1HESC@0.003096,HELAS3@0,HEPG2@0.0046595,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0.0266195,NHEK@0,NHLF@0,SKNSHRA@0.002958, 0 0 0 0 ENSG00000229980.3 ENST00000416263.2 chr17:48944040-48945632 2 1313 277 exonic 2.59 1 1,1,1 1 0,0,0 29.0632140137091 107.870036101083 89.998 94.7608530083778 48.4837545126354 167.447 91.5674028941356 75.4187725631769 181.046 0 0 chimp,human,macaque,marmoset,orangutan,panda, lincRNA processed_transcript A549@0.587336,AG04450@0.0886815,BJ@0.120346,GM12878@0.534069,H1HESC@0.33743,HELAS3@0.492293,HEPG2@0.715714,HMEC@0.096527,HSMM@0.169353,HUVEC@0.028785,K562@0.367226,MCF7@0.452006,NHEK@0.090581,NHLF@0.240484,SKNSHRA@1.09079, 0 0 0 0 ENSG00000229980.3 ENST00000523470.1 chr17:48944120-48986284 2 545 41617 intronic 0 0 0,1,0 1 0,0,0 0 9.5871398707259 89.998 153.17247706422 8.48066895739722 160.395 137.370642201835 12.0056467309032 173.857 0 0 cat,chimp,elephant,horse,human,macaque,marmoset,orangutan,panda,pig,rabbit, lincRNA processed_transcript A549@0.587336,AG04450@0.0886815,BJ@0.120346,GM12878@0.534069,H1HESC@0.33743,HELAS3@0.492293,HEPG2@0.715714,HMEC@0.096527,HSMM@0.169353,HUVEC@0.028785,K562@0.367226,MCF7@0.452006,NHEK@0.090581,NHLF@0.240484,SKNSHRA@1.09079, 0 0 0 0 ENSG00000229980.3 ENST00000514358.1 chr17:48944509-48987098 5 685 41896 intronic 0.04 0 0,1,1 0 0,0,0 10.3416058394161 9.34652472789765 58.174 10.1737226277372 9.03343994653428 175.292 11.9532846715328 12.5588122971167 172.749 0 0 chimp,dog,elephant,horse,human,macaque,marmoset,orangutan, lincRNA processed_transcript A549@0.587336,AG04450@0.0886815,BJ@0.120346,GM12878@0.534069,H1HESC@0.33743,HELAS3@0.492293,HEPG2@0.715714,HMEC@0.096527,HSMM@0.169353,HUVEC@0.028785,K562@0.367226,MCF7@0.452006,NHEK@0.090581,NHLF@0.240484,SKNSHRA@1.09079, 0 0 0 0 ENSG00000229980.3 ENST00000519432.1 chr17:48986039-48986778 2 539 198 intergenic 0.04 0 0,1,0 0 0,0,0 0 0 0 2.83858998144712 0 15.844 2.88311688311688 0 16.065 0 0 chimp,dog,elephant,horse,human,macaque,marmoset,orangutan, lincRNA processed_transcript A549@0.587336,AG04450@0.0886815,BJ@0.120346,GM12878@0.534069,H1HESC@0.33743,HELAS3@0.492293,HEPG2@0.715714,HMEC@0.096527,HSMM@0.169353,HUVEC@0.028785,K562@0.367226,MCF7@0.452006,NHEK@0.090581,NHLF@0.240484,SKNSHRA@1.09079, 0 0 0 0 ENSG00000247011.2 ENST00000501718.2 chr17:49012350-49022074 2 2052 7670 intergenic 2.11 1 0,0,1 0 0,0,0 33.9156920077973 0 34.299 35.8118908382066 4.70299869621904 10.456 34.5672514619883 4.83298565840939 11.641 0 0 chimp,cow,elephant,human,macaque,marmoset,orangutan, lincRNA processed_transcript A549@0.622294,AG04450@0.019917,BJ@0.004754,GM12878@0.00905,H1HESC@0.0423845,HELAS3@0.652822,HEPG2@0.505058,HMEC@0,HSMM@0.0056465,HUVEC@0.0026,K562@0.162046,MCF7@0.0337175,NHEK@0.00128267,NHLF@0.006576,SKNSHRA@0.109854, 0 0 0 0 ENSG00000251665.1 ENST00000506394.1 chr17:49021465-49025188 2 525 3196 intergenic -5.82 0 0,1,1 0 0,0,0 0 28.5065707133917 0 0 28.3657697121402 0 0 26.3066332916145 0 1 1 chimp,human,macaque,marmoset,orangutan, antisense antisense A549@0.016122,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0.0464085,HEPG2@0.035538,HMEC@0,HSMM@0.009484,HUVEC@0.0101345,K562@0.017704,MCF7@0.002548,NHEK@0,NHLF@0,SKNSHRA@0.0086365, 0 0 0 0 ENSG00000251665.1 ENST00000512717.1 chr17:49021475-49026111 2 787 3847 intergenic -1.45 0 0,1,0 0 0,0,0 0 23.6826098258383 0 2.33926302414231 31.5562776189238 0 2.35705209656925 29.9802443462438 0 0 0 chimp,elephant,horse,human,macaque,marmoset,orangutan,panda, antisense antisense A549@0.016122,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0.0464085,HEPG2@0.035538,HMEC@0,HSMM@0.009484,HUVEC@0.0101345,K562@0.017704,MCF7@0.002548,NHEK@0,NHLF@0,SKNSHRA@0.0086365, 0 0 0 0 ENSG00000249870.1 ENST00000509833.1 chr17:49119885-49162832 3 329 42614 intronic 3.68 0 0,0,0 0 0,0,0 0 24.5857934012296 68.391 3.76899696048632 24.7629886891632 96.648 4.13373860182371 25.9268550241704 67.63 0 0 cat,chimp,horse,human,macaque,orangutan, antisense antisense A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000249383.1 ENST00000514726.1 chr17:49389970-49412526 6 1717 20829 intergenic -2.03 1 0,0,0 0 0,0,0 0 5.13822074991598 0 0 5.47457871237217 0 0 6.28652359690816 2.82 0 1 chimp,human,macaque,orangutan, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0.003228, 0 0 0 0 ENSG00000249982.1 ENST00000505978.1 chr17:49410040-49411451 2 648 761 intergenic 1.19 0 0,0,0 0 0,0,0 0 0 0 6.63888888888889 7.53745072273325 0 7.19444444444444 8.16819973718791 0 0 0 chimp,horse,human,macaque,marmoset,orangutan,rabbit, lincRNA lincRNA A549@0.008499,AG04450@0,BJ@0,GM12878@0,H1HESC@0.008955,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0.0123725,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000249658.1 ENST00000510059.1 chr17:49412622-49413601 2 583 394 intergenic 2.28 0 0,0,0 0 0,0,0 0 0 0 0 0 0 4.83704974271012 0 0 0 0 chimp,human,macaque,marmoset,rabbit, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0.0140585,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000225860.2 ENST00000441895.2 chr17:49414076-49419932 3 2642 3210 intergenic 5.18 0 0,0,0 0 0,1,0 0 12.4485981308411 0 2.25170325510977 27.4965732087227 0 3.77630582891749 33.7884735202492 0 1 1 chimp,human,macaque,marmoset,orangutan, lincRNA lincRNA A549@0.0079565,AG04450@0,BJ@0,GM12878@0.0022115,H1HESC@0.0031825,HELAS3@0.0078905,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0.002758,K562@0.0020245,MCF7@0.0215915,NHEK@0.00199667,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000250533.1 ENST00000514147.1 chr17:49517014-49523163 2 2843 3304 intergenic 2.34 0 0,0,0 0 0,0,0 0 0 0 1.0928596552937 0 2.629 0.529722124516356 0 3.159 1 1 chimp,human,macaque,marmoset,orangutan, lincRNA lincRNA A549@0.023482,AG04450@0,BJ@0.00455,GM12878@0,H1HESC@0.002046,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0.012285,K562@0,MCF7@0.004272,NHEK@0.00362033,NHLF@0,SKNSHRA@0.0015975, 0 0 0 0 ENSG00000226364.1 ENST00000412360.1 chr17:50939481-50976948 3 679 36784 intergenic -2.83 1 0,0,1 0 0,0,0 0 4.19856459330144 0 0 8.56782840365376 0 0 9.08669530230535 6.275 0 0 chimp,dog,human,orangutan, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0.0132525,HEPG2@0.00319,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000249208.2 ENST00000511540.2 chr17:53348865-53351014 2 1738 409 intronic 4.56 0 0,1,0 0 0,0,0 71.8889528193326 0.511002444987775 270.418 66.9994246260069 11.0562347188264 120.743 55.6737629459148 11.2616136919315 120.197 0 0 chimp,cow,dog,elephant,guinea_pig,horse,human,macaque,marmoset,orangutan,panda,pig, lincRNA lincRNA A549@0.0337945,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0.0353495,HEPG2@0.107511,HMEC@0.009413,HSMM@0.0052405,HUVEC@0,K562@0,MCF7@0,NHEK@0.00151733,NHLF@0.0044605,SKNSHRA@0, 0 0 0 0 ENSG00000236319.1 ENST00000455347.1 chr17:53604325-53638452 4 586 33535 intergenic -2.33 0 0,0,0 0 0,0,0 0 1.11751900998956 0 21.2491467576792 3.3921276278515 4.811 106.962457337884 19.7758759504995 158.165 0 0 cat,chimp,cow,dog,horse,human,macaque,marmoset,orangutan,panda,pig, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0.007032,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0.004713, 0 0 0 0 ENSG00000246806.1 ENST00000499710.1 chr17:56154494-56160565 3 5868 199 intergenic 2.20 0 0,1,0 0 0,0,0 9.80368098159509 0 112.413 10.2426721199727 28.643216080402 260.492 13.887184730743 29.5025125628141 225.58 0 1 chimp,human,macaque, lincRNA lincRNA A549@0.0010575,AG04450@0.008428,BJ@0.001219,GM12878@0.0346345,H1HESC@0.0829845,HELAS3@0.01446,HEPG2@0.017397,HMEC@0,HSMM@0,HUVEC@0.002381,K562@0.02302,MCF7@0.0146695,NHEK@0,NHLF@0,SKNSHRA@0.018797, 0 0 0 0 ENSG00000224738.1 ENST00000451775.1 chr17:57183959-57195628 2 1336 10331 exonic 4.65 0 0,1,0 0 0,0,0 0 7.72597038040848 15.18 46.1190119760479 11.1687155164069 59.699 41.1751497005988 12.8680669828671 54.976 0 0 cat,chimp,cow,dog,elephant,guinea_pig,human,macaque,marmoset,orangutan,panda,pig, antisense antisense A549@1.12942,AG04450@0.168542,BJ@0.320991,GM12878@0.692659,H1HESC@1.31293,HELAS3@4.37993,HEPG2@1.20381,HMEC@0.719161,HSMM@0.417289,HUVEC@0.711509,K562@0.681306,MCF7@59.1303,NHEK@0.458883,NHLF@0.325014,SKNSHRA@0.490123, 0 0 0 0 ENSG00000229507.1 ENST00000423269.1 chr17:57707431-57709331 2 1763 135 intronic -4.98 0 0,0,0 0 0,0,0 0 0 0 0 0 0 0 0 0 0 0 chimp,dog,elephant,horse,human,macaque,orangutan,panda, sense_intronic sense_intronic A549@0.546108,AG04450@0.389162,BJ@0.408868,GM12878@1.31551,H1HESC@0.381455,HELAS3@0.811771,HEPG2@1.64329,HMEC@0.012647,HSMM@0.187182,HUVEC@1.00185,K562@1.76197,MCF7@1.78009,NHEK@0.240566,NHLF@0.322013,SKNSHRA@0.727075, 0 0 0 0 ENSG00000247508.1 ENST00000501190.1 chr17:58042457-58074333 4 1599 30271 intergenic -2.16 0 0,1,1 0 0,0,0 119.330831769856 6.26606322883288 7.524 109.836772983114 13.4862739916091 33.374 127.889305816135 21.9046612269169 28.903 0 0 cat,chimp,cow,dog,horse,human,macaque,marmoset,opossum,orangutan,pig,rabbit, lincRNA lincRNA A549@0.016124,AG04450@0.0172455,BJ@0.009163,GM12878@0.014652,H1HESC@0.001294,HELAS3@0.0042285,HEPG2@0.0219325,HMEC@0.015326,HSMM@0.024337,HUVEC@0,K562@0.0075475,MCF7@0.132029,NHEK@0.00881233,NHLF@0.0072625,SKNSHRA@0.015574, 0 0 0 0 ENSG00000214000.2 ENST00000543040.1 chr17:60885861-60913730 2 1807 26060 intergenic 1.63 0 0,1,0 0 0,0,0 0 21.0840752110514 0 6.4338682899834 27.6956254796623 67.652 6.63420033204206 30.7669224865694 70.707 0 1 chimp,human,marmoset,orangutan, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0.0196455,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@1.09983,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000233635.1 ENST00000435892.1 chr17:61271291-61275146 2 303 3550 exonic -6.01 0 0,0,0 0 0,0,0 123.405940594059 9.50535211267606 14.818 203.214521452145 17.8250704225352 0 206.864686468647 21.8405633802817 14.411 0 0 chimp,cow,horse,human,macaque,marmoset,opossum,orangutan,panda,pig, antisense antisense A549@0.009056,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0.0182345, 0 0 0 0 ENSG00000226797.1 ENST00000431604.1 chr17:61458592-61491673 3 521 32556 intronic -0.74 0 0,0,0 0 0,0,0 0 31.6366261211451 0 50.7984644913628 51.4983106032682 1.275 55.1669865642994 53.0466887824057 7.886 0 0 chimp,cow,elephant,horse,human,macaque,marmoset,mouse,orangutan,panda,rabbit, antisense antisense A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@1.7776,HSMM@0,HUVEC@0,K562@0.0200155,MCF7@0.0154345,NHEK@0,NHLF@0.01113,SKNSHRA@0.005133, 0 0 0 0 ENSG00000214174.3 ENST00000430983.1 chr17:62962668-62971686 5 3420 5590 intergenic 4.38 0 0,1,0 1 0,0,0 33.2959064327485 6.60304114490161 0 59.6397660818714 14.5985688729875 0 72.2222222222222 18.0372093023256 0 0 0 chimp,human,macaque,marmoset,orangutan, lincRNA processed_transcript A549@2.46164,AG04450@1.41243,BJ@0.771162,GM12878@1.68909,H1HESC@0.728684,HELAS3@1.73548,HEPG2@1.33374,HMEC@0.231232,HSMM@0.771747,HUVEC@0.584301,K562@1.0715,MCF7@2.05499,NHEK@0.204691,NHLF@1.25774,SKNSHRA@2.70885, 0 0 0 0 ENSG00000214174.3 ENST00000397713.1 chr17:62964156-62971694 4 2255 5277 intergenic 4.38 0 1,1,1 1 0,0,0 52.8248337028825 6.06234602994125 0 89.0736141906874 15.4644684479818 0 109.090022172949 18.8552207693765 0 0 0 chimp,elephant,guinea_pig,horse,human,macaque,marmoset,orangutan,panda,pig,rabbit, lincRNA processed_transcript A549@2.46164,AG04450@1.41243,BJ@0.771162,GM12878@1.68909,H1HESC@0.728684,HELAS3@1.73548,HEPG2@1.33374,HMEC@0.231232,HSMM@0.771747,HUVEC@0.584301,K562@1.0715,MCF7@2.05499,NHEK@0.204691,NHLF@1.25774,SKNSHRA@2.70885, 0 0 0 0 ENSG00000229330.1 ENST00000457168.1 chr17:64672475-64673522 3 496 547 intronic -4.42 0 0,0,0 0 0,0,0 0 0 0 0 0 22.108 0 0 25.245 0 0 chimp,human,marmoset,orangutan, sense_intronic sense_intronic A549@0.0330175,AG04450@0.0351575,BJ@0.045432,GM12878@0,H1HESC@0.0112875,HELAS3@0.016891,HEPG2@0.028078,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0.0488935, 1 96 0 0 ENSG00000247912.2 ENST00000500767.2 chr17:65871895-65881544 3 4426 5219 intronic 0.44 0 0,0,0 0 0,0,0 21.802982376864 0 113.958 17.2815183009489 0 161.249 19.8181201988251 0 134.721 1 1 chimp,human,macaque,marmoset,orangutan, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0.009239,H1HESC@0.002656,HELAS3@0.002111,HEPG2@0.003878,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0.00208233,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000237854.1 ENST00000435469.1 chr17:66097708-66111659 4 703 13242 intergenic 0.88 0 1,1,1 1 0,0,0 0 0 0 47.348506401138 57.215299803655 6.043 150.864864864865 66.5959824799879 6.206 0 0 chimp,human,macaque,marmoset,mouse,orangutan,pig, lincRNA processed_transcript A549@1.40555,AG04450@1.38077,BJ@1.43598,GM12878@0.130423,H1HESC@0.216822,HELAS3@0.825424,HEPG2@1.00876,HMEC@1.16698,HSMM@1.01011,HUVEC@1.84423,K562@0.134671,MCF7@2.91119,NHEK@0.493574,NHLF@1.28933,SKNSHRA@1.97345, 0 0 0 0 ENSG00000231749.1 ENST00000458677.1 chr17:67000855-67014464 4 519 13084 exonic 12.20 0 0,0,0 0 0,0,0 0 2.52254662182819 0 28.9845857418112 13.123433200856 0 31.776493256262 11.9312901253439 0 0 0 chimp,cow,dog,elephant,guinea_pig,horse,human,macaque,marmoset,orangutan,panda,pig,rabbit,rat, antisense antisense A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0.135662,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0.0314505,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000227517.1 ENST00000433856.1 chr17:67590926-67624492 3 3082 30480 intergenic -0.96 0 0,0,0 0 0,0,0 20.8909798831927 12.8063976377953 46.98 14.155418559377 10.9744094488189 40.765 14.7397793640493 10.4883202099738 44.842 0 0 chimp,human,macaque,marmoset,orangutan, lincRNA lincRNA A549@0.0094565,AG04450@0.001453,BJ@0.002098,GM12878@0.0064055,H1HESC@0.016157,HELAS3@0,HEPG2@0.0066865,HMEC@0,HSMM@0.000739,HUVEC@0.0015765,K562@0,MCF7@0.002607,NHEK@0.001263,NHLF@0,SKNSHRA@0.001803, 0 0 0 0 ENSG00000237560.1 ENST00000455460.1 chr17:67957848-67979614 5 623 21135 intergenic 1.87 0 0,0,0 0 0,0,0 66.4237560192616 22.1369765791341 3.762 36.2038523274478 23.7442157558552 6.425 38.0706260032103 27.0172226165129 4.604 0 0 chimp,horse,human,macaque,marmoset,orangutan,pig, lincRNA lincRNA A549@0,AG04450@0.077117,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0.020506,SKNSHRA@0, 0 0 0 0 ENSG00000237560.1 ENST00000420427.1 chr17:67957903-67979679 5 660 21108 intergenic -2.42 0 0,0,0 0 0,0,0 58.2954545454545 22.1652927799886 6.365 30.4136363636364 23.7745878339966 8.853 33.3681818181818 27.0517813151412 6.564 0 0 chimp,cow,elephant,horse,human,macaque,marmoset,orangutan, lincRNA lincRNA A549@0,AG04450@0.077117,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0.020506,SKNSHRA@0, 0 0 0 0 ENSG00000230258.1 ENST00000435112.1 chr17:68013465-68125000 5 594 110933 intronic -5.20 0 1,1,1 1 0,0,0 8.13131313131313 11.9525208909883 0 23.4511784511784 12.9276139651862 1.734 25.2744107744108 15.1056042836667 1.734 0 0 cat,chimp,cow,dog,elephant,horse,human,macaque,marmoset,orangutan,pig,rabbit, antisense antisense A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@2.53409,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000225818.1 ENST00000442627.1 chr17:69592479-69593419 2 559 379 intergenic -2.33 0 0,0,0 0 0,0,0 0 0 40.098 0 0 86.749 0 0 98.768 0 0 chimp,dog,human,macaque,marmoset,orangutan,rabbit, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000225818.1 ENST00000450826.1 chr17:69592617-69593420 2 430 371 intergenic -2.33 0 0,1,0 0 0,0,0 0 0 40.098 0 0 86.749 0 0 98.768 0 0 chimp,dog,horse,human,macaque,marmoset,orangutan,rabbit, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000228639.2 ENST00000430908.2 chr17:70017992-70022103 3 343 3764 intergenic -5.54 0 0,0,1 0 0,0,0 32.268221574344 50.3703506907545 97.713 40.0262390670554 16.4375664187035 67.043 38.9650145772595 22.7476089266738 72.752 0 0 chimp,dog,elephant,human,macaque,marmoset,mouse,orangutan,panda,rabbit, lincRNA lincRNA A549@0.025094,AG04450@0.0132845,BJ@0,GM12878@0.129545,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0.007505,NHLF@0,SKNSHRA@0.013593, 0 0 0 0 ENSG00000228639.2 ENST00000543512.1 chr17:70017992-70030233 2 321 11918 intergenic 0 0 1,1,1 0 0,0,0 0 54.7365329753314 180.78 6.35514018691589 35.9362309112267 193.327 0 40.8171673099513 193.174 0 0 cat,chimp,cow,elephant,horse,human,macaque,marmoset,orangutan,panda, lincRNA lincRNA A549@0.025094,AG04450@0.0132845,BJ@0,GM12878@0.129545,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0.007505,NHLF@0,SKNSHRA@0.013593, 0 0 0 0 ENSG00000256124.1 ENST00000538693.1 chr17:70026432-70032457 2 637 5386 intergenic -0.98 0 0,1,0 0 0,0,0 92.5290423861852 58.2820274786483 0 104.967032967033 57.7359821760119 0 126.742543171115 58.4764203490531 0 0 0 chimp,cow,dog,elephant,horse,human,macaque,marmoset,opossum,orangutan,panda,pig,platypus,rabbit,rat, lincRNA lincRNA A549@0.120775,AG04450@0.114085,BJ@0.0178055,GM12878@0.543741,H1HESC@0.04071,HELAS3@0,HEPG2@0,HMEC@0.037497,HSMM@0.004175,HUVEC@0,K562@0,MCF7@0,NHEK@0.014009,NHLF@0.028228,SKNSHRA@0.266406, 0 0 0 0 ENSG00000256124.1 ENST00000472655.2 chr17:70026795-70034406 3 543 7064 intergenic -4.27 0 0,1,0 0 0,0,0 38.0220994475138 44.437570781427 37.962 55.8434622467772 44.0212344280861 36.541 62.4125230202578 44.5857870894677 46.845 0 1 chimp,human,macaque,orangutan, lincRNA lincRNA A549@0.120775,AG04450@0.114085,BJ@0.0178055,GM12878@0.543741,H1HESC@0.04071,HELAS3@0,HEPG2@0,HMEC@0.037497,HSMM@0.004175,HUVEC@0,K562@0,MCF7@0,NHEK@0.014009,NHLF@0.028228,SKNSHRA@0.266406, 1 96 0 0 ENSG00000256124.1 ENST00000538810.1 chr17:70026795-70034889 3 516 7574 intergenic -3.10 0 0,1,0 0 0,0,0 40.0116279069767 41.4453393187219 37.962 58.765503875969 41.057037232638 36.541 65.6782945736434 41.5835753894904 46.845 0 0 chimp,dog,guinea_pig,human,macaque,marmoset,orangutan, lincRNA lincRNA A549@0.120775,AG04450@0.114085,BJ@0.0178055,GM12878@0.543741,H1HESC@0.04071,HELAS3@0,HEPG2@0,HMEC@0.037497,HSMM@0.004175,HUVEC@0,K562@0,MCF7@0,NHEK@0.014009,NHLF@0.028228,SKNSHRA@0.266406, 0 0 0 0 ENSG00000254148.2 ENST00000540802.1 chr17:70030248-70053871 3 575 23044 intergenic -4.40 0 0,0,0 0 0,0,0 19.4034782608696 26.1136955389689 324.063 33.7547826086956 24.7020916507551 324.839 44.8695652173913 25.5199184169415 316.659 0 0 chimp,cow,dog,elephant,guinea_pig,human,macaque,marmoset,mouse,panda,pig,rabbit,rat, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0.007557,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0.007109,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000254148.2 ENST00000412640.2 chr17:70033455-70053860 5 630 19767 intergenic 6.18 0 0,0,0 0 0,0,0 10.2222222222222 21.5358931552588 325.113 17.7777777777778 19.1219709617039 331.318 25.9650793650794 20.1384630950574 323.248 0 0 chimp,guinea_pig,human,macaque,marmoset, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0.007557,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0.007109,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000254148.2 ENST00000424417.2 chr17:70036788-70053875 3 573 16510 intergenic 3.52 0 0,0,0 0 0,0,0 15.8202443280977 23.6014536644458 321.963 34.9650959860384 20.6525741974561 322.483 44.2286212914485 21.9655966081163 314.263 0 0 chimp,dog,human,macaque,marmoset,orangutan, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0.007557,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0.007109,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000234899.2 ENST00000529667.1 chr17:70067183-70115634 3 337 48110 intergenic -4.53 0 0,1,1 0 0,0,0 0 31.178777800873 38.625 0 28.8609852421534 60.974 0 29.9754313032634 55.573 0 0 chimp,dog,horse,human,macaque,marmoset,orangutan,panda,pig, lincRNA processed_transcript A549@0.111089,AG04450@0.254999,BJ@0.000812,GM12878@0.769371,H1HESC@0.242445,HELAS3@0.18328,HEPG2@1.71244,HMEC@0.051353,HSMM@0.0420305,HUVEC@0,K562@0,MCF7@0.0174175,NHEK@0.381719,NHLF@0.10099,SKNSHRA@0.794575, 0 0 0 0 ENSG00000234899.2 ENST00000434703.1 chr17:70067184-70112157 7 3025 41936 intergenic 2.35 0 0,1,1 0 0,0,0 10.0231404958678 34.5103252575353 0 20.1206611570248 30.9097672644029 0 21.8793388429752 32.0033622663106 0 0 0 chimp,dog,horse,human,macaque,marmoset,orangutan, lincRNA processed_transcript A549@0.111089,AG04450@0.254999,BJ@0.000812,GM12878@0.769371,H1HESC@0.242445,HELAS3@0.18328,HEPG2@1.71244,HMEC@0.051353,HSMM@0.0420305,HUVEC@0,K562@0,MCF7@0.0174175,NHEK@0.381719,NHLF@0.10099,SKNSHRA@0.794575, 0 0 0 0 ENSG00000234899.2 ENST00000440093.2 chr17:70067184-70115589 4 464 47935 intergenic -4.76 0 0,1,1 0 0,0,0 0 31.2926045686868 21.75 0 28.9663502659852 35.819 0 30.0848649212475 32.533 0 0 chimp,horse,human,macaque,marmoset,orangutan,pig, lincRNA processed_transcript A549@0.111089,AG04450@0.254999,BJ@0.000812,GM12878@0.769371,H1HESC@0.242445,HELAS3@0.18328,HEPG2@1.71244,HMEC@0.051353,HSMM@0.0420305,HUVEC@0,K562@0,MCF7@0.0174175,NHEK@0.381719,NHLF@0.10099,SKNSHRA@0.794575, 0 0 0 0 ENSG00000226101.1 ENST00000419257.1 chr17:70068474-70089622 6 2057 19081 intergenic -0.82 1 0,0,1 0 0,0,0 36.099173553719 4.97505371835858 68.4 14.3067574137093 11.4500812326398 109.954 12.192513368984 12.8570305539542 99.787 0 0 chimp,horse,human,marmoset,orangutan, lincRNA lincRNA A549@0,AG04450@0.0010865,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0.0021095,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0.0011, 0 0 0 0 ENSG00000234899.2 ENST00000533996.1 chr17:70072627-70081642 4 997 8012 intergenic 0.25 0 0,0,0 0 0,0,0 0 7.43247628557164 0 0 16.7827009485771 0 0 16.7948077883175 0 0 0 chimp,horse,human,macaque,marmoset,orangutan, lincRNA retained_intron A549@0.111089,AG04450@0.254999,BJ@0.000812,GM12878@0.769371,H1HESC@0.242445,HELAS3@0.18328,HEPG2@1.71244,HMEC@0.051353,HSMM@0.0420305,HUVEC@0,K562@0,MCF7@0.0174175,NHEK@0.381719,NHLF@0.10099,SKNSHRA@0.794575, 0 0 0 0 ENSG00000234899.2 ENST00000533232.1 chr17:70076079-70116934 4 1735 39114 intergenic -0.45 0 1,1,1 1 0,0,0 0 35.626425320857 300.07 16.4057636887608 30.9470266400777 494.137 17.7976945244957 32.202331645958 419.132 0 0 cat,chimp,cow,dog,horse,human,macaque,marmoset,orangutan,pig, lincRNA retained_intron A549@0.111089,AG04450@0.254999,BJ@0.000812,GM12878@0.769371,H1HESC@0.242445,HELAS3@0.18328,HEPG2@1.71244,HMEC@0.051353,HSMM@0.0420305,HUVEC@0,K562@0,MCF7@0.0174175,NHEK@0.381719,NHLF@0.10099,SKNSHRA@0.794575, 0 0 0 0 ENSG00000234899.2 ENST00000533039.1 chr17:70078053-70085261 5 430 6770 intergenic -4.76 0 0,0,1 0 0,0,0 0 0 54.964 0 5.95140324963072 12.641 0 6.7533234859675 12.82 0 0 chimp,elephant,horse,human,macaque,marmoset,orangutan, lincRNA processed_transcript A549@0.111089,AG04450@0.254999,BJ@0.000812,GM12878@0.769371,H1HESC@0.242445,HELAS3@0.18328,HEPG2@1.71244,HMEC@0.051353,HSMM@0.0420305,HUVEC@0,K562@0,MCF7@0.0174175,NHEK@0.381719,NHLF@0.10099,SKNSHRA@0.794575, 0 0 0 0 ENSG00000234899.2 ENST00000414600.1 chr17:70086600-70137921 2 740 50579 encompassing -3.92 0 0,0,0 0 0,0,0 0 60.1578323019435 0 0 67.3441349176535 0 0 66.4230609541509 0 0 0 cat,chimp,dog,horse,human,macaque,marmoset,orangutan,panda,rabbit, lincRNA processed_transcript A549@0.111089,AG04450@0.254999,BJ@0.000812,GM12878@0.769371,H1HESC@0.242445,HELAS3@0.18328,HEPG2@1.71244,HMEC@0.051353,HSMM@0.0420305,HUVEC@0,K562@0,MCF7@0.0174175,NHEK@0.381719,NHLF@0.10099,SKNSHRA@0.794575, 0 0 0 0 ENSG00000234899.2 ENST00000533179.1 chr17:70086896-70115664 2 458 28308 intergenic -3.92 0 0,1,1 0 0,0,0 0 45.4563374311149 49.875 0 37.482831708351 77.744 0 39.09537939805 64.523 0 0 cat,chimp,dog,elephant,horse,human,macaque,marmoset,orangutan,panda,rabbit, lincRNA processed_transcript A549@0.111089,AG04450@0.254999,BJ@0.000812,GM12878@0.769371,H1HESC@0.242445,HELAS3@0.18328,HEPG2@1.71244,HMEC@0.051353,HSMM@0.0420305,HUVEC@0,K562@0,MCF7@0.0174175,NHEK@0.381719,NHLF@0.10099,SKNSHRA@0.794575, 168 2 110 2 ENSG00000234899.2 ENST00000529096.1 chr17:70086960-70106689 2 443 19284 intergenic -2.54 0 0,0,1 0 0,0,0 0 53.0604646338934 18.354 15.1422121896163 44.1245592200788 8.862 15.5214446952596 44.9759386019498 12.672 0 0 chimp,dog,horse,human,orangutan,rabbit, lincRNA processed_transcript A549@0.111089,AG04450@0.254999,BJ@0.000812,GM12878@0.769371,H1HESC@0.242445,HELAS3@0.18328,HEPG2@1.71244,HMEC@0.051353,HSMM@0.0420305,HUVEC@0,K562@0,MCF7@0.0174175,NHEK@0.381719,NHLF@0.10099,SKNSHRA@0.794575, 0 0 0 0 ENSG00000231994.2 ENST00000446332.1 chr17:70086962-70106689 2 441 19284 intergenic -2.54 0 0,0,1 0 0,0,0 0 53.0604646338934 18.354 15.2108843537415 44.1245592200788 8.862 15.5918367346939 44.9759386019498 12.672 0 0 chimp,dog,horse,human,orangutan,rabbit, lincRNA processed_transcript A549@0.004095,AG04450@0.0056065,BJ@0,GM12878@0.0055055,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0.039056,NHLF@0,SKNSHRA@0, 168 2 110 2 ENSG00000234899.2 ENST00000443037.1 chr17:70106319-70106865 2 392 152 intergenic 5.48 0 0,0,1 0 0,0,0 45.2755102040816 22.1447368421053 77.406 42.7091836734694 34.5789473684211 40.291 43.359693877551 35.25 61.305 0 0 chimp,cow,dog,elephant,guinea_pig,horse,human,macaque,marmoset,orangutan,panda,pig, lincRNA processed_transcript A549@0.111089,AG04450@0.254999,BJ@0.000812,GM12878@0.769371,H1HESC@0.242445,HELAS3@0.18328,HEPG2@1.71244,HMEC@0.051353,HSMM@0.0420305,HUVEC@0,K562@0,MCF7@0.0174175,NHEK@0.381719,NHLF@0.10099,SKNSHRA@0.794575, 0 0 0 0 ENSG00000234899.2 ENST00000532249.1 chr17:70137527-70216859 3 574 78754 intergenic 0 0 0,0,0 0 0,0,0 23.3170731707317 26.7677451304061 0 0 27.5386647027453 0 0 28.1549508596389 0 0 0 chimp,dog,horse,human,macaque,orangutan,panda, lincRNA retained_intron A549@0.111089,AG04450@0.254999,BJ@0.000812,GM12878@0.769371,H1HESC@0.242445,HELAS3@0.18328,HEPG2@1.71244,HMEC@0.051353,HSMM@0.0420305,HUVEC@0,K562@0,MCF7@0.0174175,NHEK@0.381719,NHLF@0.10099,SKNSHRA@0.794575, 0 0 0 0 ENSG00000227036.1 ENST00000453722.1 chr17:70380443-70588943 4 1743 206751 intergenic -2.86 0 0,1,0 1 0,0,0 0 18.0833127772054 0 4.9718875502008 17.2316506328869 7.692 5.17555938037866 19.7334087864146 10.36 0 0 chimp,dog,elephant,human,macaque,marmoset,orangutan,pig, lincRNA processed_transcript A549@11.4363,AG04450@1.74571,BJ@1.32837,GM12878@1.27209,H1HESC@0.289766,HELAS3@1.96151,HEPG2@6.36965,HMEC@5.84725,HSMM@1.06129,HUVEC@0.0015285,K562@0,MCF7@3.59574,NHEK@8.29635,NHLF@0.369827,SKNSHRA@2.26813, 0 0 0 0 ENSG00000227036.1 ENST00000457958.1 chr17:70399469-70588941 5 1951 187513 intergenic -0.41 0 1,1,1 1 0,0,0 7.49974372116863 18.2127905798531 0 8.73552024602768 17.0493459120168 7.692 13.0025627883137 19.5758640734242 10.36 0 0 chimp,human,macaque,marmoset,orangutan, lincRNA processed_transcript A549@11.4363,AG04450@1.74571,BJ@1.32837,GM12878@1.27209,H1HESC@0.289766,HELAS3@1.96151,HEPG2@6.36965,HMEC@5.84725,HSMM@1.06129,HUVEC@0.0015285,K562@0,MCF7@3.59574,NHEK@8.29635,NHLF@0.369827,SKNSHRA@2.26813, 0 0 0 0 ENSG00000245411.1 ENST00000499674.1 chr17:70594180-70636611 5 2260 40163 intergenic 8.16 0 0,0,1 0 0,0,0 0 7.60490999178348 0 3.65088495575221 7.94554689639718 2.97 4.67566371681416 17.4714040285835 3.058 0 0 chimp,human,macaque,marmoset,panda, lincRNA lincRNA A549@0.27039,AG04450@0.0075455,BJ@0.004311,GM12878@0.321464,H1HESC@0.0398135,HELAS3@0.054966,HEPG2@0.252497,HMEC@0,HSMM@0.0309315,HUVEC@0,K562@0.012895,MCF7@0.0538015,NHEK@0.152107,NHLF@0,SKNSHRA@0.143025, 0 0 0 0 ENSG00000177338.7 ENST00000444747.2 chr17:71745409-71819972 3 1582 72977 exonic 4.66 0 1,1,1 0 0,1,0 0 16.9780204722036 0 7.71238938053097 17.3164421667101 0 60.7610619469027 18.6626608383463 0 0 0 chimp,horse,human,macaque,marmoset,orangutan, antisense non_coding A549@0.0017425,AG04450@0,BJ@0,GM12878@0.0101345,H1HESC@0.014397,HELAS3@0,HEPG2@0.045681,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0.001231,SKNSHRA@0.0057355, 0 0 0 0 ENSG00000177338.7 ENST00000321800.7 chr17:71746469-71824659 4 704 77480 exonic 3.12 0 0,0,1 0 0,1,0 0 15.9912880743418 0 10.9872159090909 16.3100413009809 0 11.2883522727273 17.6587635518844 0 0 0 chimp,cow,elephant,horse,human,macaque,orangutan,panda, antisense non_coding A549@0.0017425,AG04450@0,BJ@0,GM12878@0.0101345,H1HESC@0.014397,HELAS3@0,HEPG2@0.045681,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0.001231,SKNSHRA@0.0057355, 0 0 0 0 ENSG00000177338.7 ENST00000544677.1 chr17:71746469-71824659 4 468 77716 intronic -3.46 0 0,0,1 0 0,1,0 0 15.9427273663081 0 16.5277777777778 16.2605126357507 0 16.9807692307692 17.60513922487 0 0 0 cat,chimp,cow,elephant,human,macaque,marmoset,orangutan, antisense non_coding A549@0.0017425,AG04450@0,BJ@0,GM12878@0.0101345,H1HESC@0.014397,HELAS3@0,HEPG2@0.045681,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0.001231,SKNSHRA@0.0057355, 0 0 0 0 ENSG00000234721.1 ENST00000455366.1 chr17:71782961-71796932 7 2465 11494 encompassing 2.57 1 0,0,0 0 0,0,0 19.7022312373225 4.77518705411519 94.6 16.483569979716 5.6057943274752 50.914 14.8709939148073 6.25874369236123 83.93 0 0 chimp,human,macaque,marmoset,orangutan, processed_transcript processed_transcript A549@0.0019955,AG04450@0,BJ@0,GM12878@0,H1HESC@0.0036065,HELAS3@0,HEPG2@0.0152665,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000246731.2 ENST00000499670.2 chr17:72206119-72209460 2 2499 840 exonic 4.19 0 0,1,0 1 0,0,0 0 0 33.66 3.19607843137255 0 56.353 4.21208483393357 0 79.958 0 1 chimp,human, lincRNA processed_transcript A549@0.006021,AG04450@0.589222,BJ@0.203154,GM12878@0.358685,H1HESC@0.153412,HELAS3@0.101011,HEPG2@0.042505,HMEC@0.040228,HSMM@0.027172,HUVEC@0.176957,K562@0.097193,MCF7@0.0184795,NHEK@0.103472,NHLF@0.275763,SKNSHRA@0.894139, 0 0 0 0 ENSG00000246731.2 ENST00000532794.1 chr17:72207625-72209481 2 586 1268 intergenic 0 0 0,1,0 1 0,0,0 0 0 33.66 0 0 56.353 0 1.85331230283912 79.958 0 1 chimp,human,marmoset, lincRNA processed_transcript A549@0.006021,AG04450@0.589222,BJ@0.203154,GM12878@0.358685,H1HESC@0.153412,HELAS3@0.101011,HEPG2@0.042505,HMEC@0.040228,HSMM@0.027172,HUVEC@0.176957,K562@0.097193,MCF7@0.0184795,NHEK@0.103472,NHLF@0.275763,SKNSHRA@0.894139, 0 0 0 0 ENSG00000246731.2 ENST00000531617.1 chr17:72208813-72209447 2 534 98 intergenic -1.55 0 0,1,0 1 0,0,0 0 0 33.66 0 0 56.353 4.40074906367041 0 79.958 0 1 chimp,human,marmoset,orangutan, lincRNA processed_transcript A549@0.006021,AG04450@0.589222,BJ@0.203154,GM12878@0.358685,H1HESC@0.153412,HELAS3@0.101011,HEPG2@0.042505,HMEC@0.040228,HSMM@0.027172,HUVEC@0.176957,K562@0.097193,MCF7@0.0184795,NHEK@0.103472,NHLF@0.275763,SKNSHRA@0.894139, 0 0 0 0 ENSG00000247180.1 ENST00000499811.1 chr17:74136637-74150364 8 1804 11909 exonic 11.80 0 0,0,0 0 0,0,0 43.2754988913525 55.5735997984717 331.76 37.4883592017738 43.3415064237132 326.173 36.8470066518847 43.869342514065 329.804 0 0 cow,dog,horse,human,macaque,marmoset,orangutan, lincRNA lincRNA A549@0.136259,AG04450@0.003079,BJ@0,GM12878@0.006287,H1HESC@0.359101,HELAS3@0.004607,HEPG2@0.215361,HMEC@0,HSMM@0,HUVEC@0,K562@0.0012815,MCF7@0.0361685,NHEK@0,NHLF@0,SKNSHRA@0.001252, 0 0 0 0 ENSG00000250233.1 ENST00000509966.1 chr17:74485424-74488575 2 3078 71 intronic 5.23 0 0,0,0 0 0,0,0 12.0412605588044 0 10.659 11.7469135802469 0 14.38 8.39733593242365 0 19.895 1 1 chimp,human,macaque,marmoset,orangutan, lincRNA lincRNA A549@0.222897,AG04450@0.0449365,BJ@0.0481485,GM12878@0.164503,H1HESC@0.178399,HELAS3@0.253363,HEPG2@0.49887,HMEC@0.105448,HSMM@0.0251415,HUVEC@0.272354,K562@0.0135095,MCF7@0.569018,NHEK@0.325894,NHLF@0.000105,SKNSHRA@0.126523, 0 0 0 0 ENSG00000250179.2 ENST00000543179.1 chr17:75524207-75532673 4 4436 4024 intergenic 4.28 0 0,1,0 0 0,0,0 0 1.42147117296223 26.985 0.861587015329125 7.05492047713718 4.207 1.72678088367899 14.153578528827 6.828 1 1 chimp,human,macaque,marmoset,orangutan, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0.024705,HELAS3@0,HEPG2@0,HMEC@0.001844,HSMM@0.0016855,HUVEC@0,K562@0,MCF7@0.0635515,NHEK@0.0128847,NHLF@0,SKNSHRA@0.011765, 0 0 0 0 ENSG00000238167.1 ENST00000439041.1 chr17:76311810-76343879 3 796 31269 intergenic 4.82 0 0,1,0 0 0,0,0 30.6859296482412 14.6288336691292 31.878 61.0439698492462 17.100834692507 46.498 62.0992462311558 18.4868080207234 56.64 0 0 chimp,cow,dog,elephant,guinea_pig,horse,human,macaque,marmoset,orangutan,rat, antisense antisense A549@0.244743,AG04450@0.145307,BJ@0.313414,GM12878@0.05416,H1HESC@0.050431,HELAS3@0.453551,HEPG2@0.071693,HMEC@0.051247,HSMM@0.050596,HUVEC@0.0571855,K562@0,MCF7@0.027793,NHEK@0.0286813,NHLF@0.247344,SKNSHRA@0.760284, 0 0 0 0 ENSG00000233986.2 ENST00000434427.1 chr17:76489237-76495428 4 928 5257 exonic 6.24 0 0,0,1 0 0,0,0 30.8318965517241 20.1812821000571 38.418 107.171336206897 45.886056686323 58.026 118.757543103448 52.4552025870268 76.919 0 0 chimp,elephant,guinea_pig,horse,human,macaque,marmoset,mouse, antisense antisense A549@0.127781,AG04450@0,BJ@0,GM12878@0.0136815,H1HESC@0.0417885,HELAS3@1.1479,HEPG2@0.131921,HMEC@0,HSMM@0.010475,HUVEC@0,K562@0,MCF7@0.002206,NHEK@0.00282667,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000244209.1 ENST00000493634.1 chr17:76841412-76842209 2 336 459 intergenic 0 0 0,1,0 0 0,0,0 0 0 0 0 0 0 406.300595238095 0 0 0 0 cat,chimp,cow,dog,elephant,guinea_pig,horse,human,macaque,marmoset,mouse,opossum,orangutan,panda,pig,rabbit,rat, antisense antisense A549@0.685839,AG04450@0.233276,BJ@0.188389,GM12878@0.300698,H1HESC@0.228534,HELAS3@1.47322,HEPG2@0.341546,HMEC@0.060571,HSMM@0.0439265,HUVEC@0.185121,K562@0.327396,MCF7@0.523425,NHEK@0.227493,NHLF@0.09788,SKNSHRA@1.52672, 0 0 0 0 ENSG00000248706.1 ENST00000507040.1 chr17:77889984-77900524 5 5106 5426 intergenic 14.00 0 0,0,0 0 0,0,0 12.5679592636114 14.6524143015112 0 11.4567175871524 16.6371175820125 7.256 11.6811594202899 17.1688168079617 7.473 0 1 chimp,human,macaque,orangutan, lincRNA lincRNA A549@0.0551585,AG04450@0.0011585,BJ@0.0012665,GM12878@0.0325725,H1HESC@0.014432,HELAS3@0.089935,HEPG2@0.140354,HMEC@0.004006,HSMM@0.007278,HUVEC@0.0026985,K562@0,MCF7@0.241961,NHEK@0,NHLF@0.022251,SKNSHRA@0.0470065, 0 0 0 0 ENSG00000255691.1 ENST00000545206.1 chr17:78940039-78945013 2 3131 1841 exonic 4.91 0 0,0,0 0 0,0,0 0 0 0 5.19418716065155 0 0 22.9693388693708 1.14883215643672 8.112 0 1 chimp,human,orangutan, lincRNA lincRNA A549@0.0013855,AG04450@0.0015035,BJ@0.001033,GM12878@0,H1HESC@0.008712,HELAS3@0.002339,HEPG2@0.0167015,HMEC@0,HSMM@0.353668,HUVEC@0,K562@0.001568,MCF7@0.0019595,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000225180.1 ENST00000414089.1 chr17:79139307-79156964 6 1571 16076 intronic 41.01 0 0,1,0 0 0,0,0 11.0502864417568 7.24309529733765 0 29.4048376830045 11.2739487434685 10.119 40.6479949077021 11.0849091813884 16.206 0 0 cat,chimp,cow,elephant,guinea_pig,horse,human,macaque,marmoset,opossum,orangutan,panda,pig, antisense antisense A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0.02806,HELAS3@0.0473825,HEPG2@0.104112,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0.025929, 0 0 0 0 ENSG00000233923.1 ENST00000434351.1 chr17:79203141-79206006 4 811 2048 exonic 5.09 0 0,1,0 0 0,0,0 0 8.47021484375 0 26.9297163995068 42.89599609375 16.212 60.1134401972873 55.98828125 26.306 0 0 chimp,cow,dog,elephant,horse,human,macaque,marmoset,orangutan, antisense ambiguous_orf A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0.007533,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000229848.1 ENST00000430912.1 chr17:79481073-79494269 2 359 12835 intergenic 0 0 0,1,0 0 0,0,0 0 4.97654850019478 0 0 7.25414881184262 7.064 0 8.87931437475652 7.428 0 0 chimp,human,macaque,marmoset,orangutan,panda, antisense antisense A549@0.153394,AG04450@0.0484475,BJ@0.189697,GM12878@0.0856095,H1HESC@0.054583,HELAS3@0.111971,HEPG2@0.0641565,HMEC@0.005229,HSMM@0.0089425,HUVEC@0.0191,K562@0,MCF7@0.224521,NHEK@0.001686,NHLF@0.0208335,SKNSHRA@0.233384, 0 0 0 0 ENSG00000229848.1 ENST00000442532.1 chr17:79486066-79494802 2 781 7953 intergenic -2.66 0 0,1,1 0 0,0,0 0 0 0 8.42893725992318 3.93122092292217 0 9.19078104993598 4.42839180183578 0 0 0 cat,chimp,cow,dog,elephant,guinea_pig,horse,human,macaque,marmoset,orangutan,panda,rabbit,rat, antisense antisense A549@0.153394,AG04450@0.0484475,BJ@0.189697,GM12878@0.0856095,H1HESC@0.054583,HELAS3@0.111971,HEPG2@0.0641565,HMEC@0.005229,HSMM@0.0089425,HUVEC@0.0191,K562@0,MCF7@0.224521,NHEK@0.001686,NHLF@0.0208335,SKNSHRA@0.233384, 0 0 0 0 ENSG00000246747.1 ENST00000499078.1 chr17:79604197-79606203 2 1894 110 intronic -1.67 0 0,1,0 1 0,0,0 0 0 102.912 0 0 142.4 224.482048574446 0 144.593 1 1 chimp,human,macaque,marmoset,orangutan, lincRNA lincRNA A549@0.212211,AG04450@0.209334,BJ@0.193164,GM12878@0.26654,H1HESC@0.167768,HELAS3@0.241456,HEPG2@0.130871,HMEC@0.179248,HSMM@0.110615,HUVEC@0.040566,K562@0.135476,MCF7@0.173405,NHEK@0.184321,NHLF@0.217233,SKNSHRA@0.338479, 0 0 0 0 ENSG00000247329.1 ENST00000500627.1 chr17:79885705-79888628 2 1892 1029 intergenic 2.77 0 1,1,1 1 0,0,0 0 0 0 0.673890063424947 0 166.177 9.40327695560254 0 177.693 0 0 chimp,dog,human, lincRNA lincRNA A549@2.07721,AG04450@1.28155,BJ@1.44346,GM12878@0.434567,H1HESC@1.53091,HELAS3@0.615281,HEPG2@1.18494,HMEC@0.793515,HSMM@0.262259,HUVEC@0.589058,K562@0.447082,MCF7@0.28289,NHEK@0.578143,NHLF@0.660584,SKNSHRA@2.21439, 0 0 0 0 ENSG00000235296.1 ENST00000415556.1 chr17:79899745-79905477 2 689 5041 exonic -0.18 0 0,1,0 0 0,0,0 0 0 153.711 25.9013062409289 0 319.245 27.4876632801161 0 361.077 0 0 human,orangutan, antisense antisense A549@0.0143045,AG04450@0,BJ@0.010689,GM12878@0,H1HESC@0.02343,HELAS3@0.0591265,HEPG2@0.0147775,HMEC@0,HSMM@0,HUVEC@0.0078255,K562@0.0067205,MCF7@0.011704,NHEK@0,NHLF@0,SKNSHRA@0.0914115, 0 0 0 0 ENSG00000248630.1 ENST00000508570.1 chr17:80172103-80175228 2 3049 74 intergenic 6.05 0 0,1,0 0 0,0,0 0 0 0 0 0 3.472 0 0 9.18 0 1 human,macaque,orangutan, lincRNA lincRNA A549@0.0180535,AG04450@0.0019405,BJ@0.000807,GM12878@0.0139255,H1HESC@0.003896,HELAS3@0.134579,HEPG2@0.148197,HMEC@0,HSMM@0.019887,HUVEC@0.010374,K562@0.001755,MCF7@0.016063,NHEK@0.009391,NHLF@0,SKNSHRA@0.0335485, 0 0 0 0 ENSG00000245410.1 ENST00000499503.1 chr17:80200543-80203317 2 2725 47 exonic 12.89 0 0,1,1 0 0,0,0 100.147889908257 0 1.465 98.4073394495413 0 3.66 107.318899082569 0 3.696 0 0 chimp,horse,human,macaque,marmoset,mouse,orangutan, lincRNA lincRNA A549@0.383235,AG04450@1.2222,BJ@2.94589,GM12878@0.618798,H1HESC@0.0969225,HELAS3@3.55793,HEPG2@5.57076,HMEC@1.89592,HSMM@1.55678,HUVEC@1.06695,K562@0.0944035,MCF7@0.161824,NHEK@1.08898,NHLF@1.08536,SKNSHRA@1.07065, 0 0 0 0 ENSG00000244773.1 ENST00000499745.1 chr17:80247922-80250690 2 1808 958 intergenic 11.50 0 1,1,1 0 0,0,0 0 0 0 0 0 0 0 0 0 0 1 human,macaque,orangutan, lincRNA lincRNA A549@0.44774,AG04450@0.078465,BJ@0.023493,GM12878@0.243615,H1HESC@0.295574,HELAS3@0.423678,HEPG2@0.380858,HMEC@0.137996,HSMM@0.035085,HUVEC@0.12493,K562@0.374729,MCF7@0.396894,NHEK@0.0470123,NHLF@0.019332,SKNSHRA@0.421145, 0 0 0 0 ENSG00000245109.1 ENST00000500746.1 chr17:80671788-80674131 2 892 1449 intergenic -2.28 0 0,1,1 0 0,0,0 0 0 10.865 0 0 37.236 0 0 56.601 0 1 chimp,human,macaque,orangutan, lincRNA lincRNA A549@0.04742,AG04450@0.0100285,BJ@0.038062,GM12878@0.0117865,H1HESC@0.0435545,HELAS3@0.019795,HEPG2@0.483093,HMEC@0.01374,HSMM@0.0418575,HUVEC@0,K562@0.026272,MCF7@0.0220755,NHEK@0.0261777,NHLF@0.0021825,SKNSHRA@0.336444, 0 0 0 0 ENSG00000238060.2 ENST00000445581.2 chr18:3603736-3608312 2 2237 2337 intronic 2.86 0 1,1,1 0 0,1,0 47.3938310236924 0 207.66 40.81269557443 0.675224646983312 75.168 44.8788556101922 1.26829268292683 92.948 1 1 chimp,human,macaque,marmoset,orangutan, lincRNA lincRNA A549@2.80171,AG04450@0.650901,BJ@0.647428,GM12878@0.065638,H1HESC@7.1911,HELAS3@4.79597,HEPG2@3.98314,HMEC@0.422157,HSMM@0.291604,HUVEC@3.94479,K562@14.3106,MCF7@0.792562,NHEK@0.337035,NHLF@0.351617,SKNSHRA@0.960286, 0 0 0 0 ENSG00000245382.1 ENST00000501730.1 chr18:19746859-19748929 2 1786 282 intergenic 11.80 0 0,1,1 0 0,0,0 66.7945128779395 113.59219858156 220.152 51.484882418813 177.595744680851 257.534 56.5375139977604 232.343971631206 198.276 0 0 chimp,human,macaque,marmoset,mouse,orangutan,panda, lincRNA lincRNA A549@0.086797,AG04450@0.0338845,BJ@0.0857295,GM12878@0,H1HESC@0.0034805,HELAS3@0.234699,HEPG2@0.0494725,HMEC@0.022901,HSMM@0.0094545,HUVEC@0.224579,K562@0.019854,MCF7@0.113231,NHEK@0.0131343,NHLF@0.0902965,SKNSHRA@0, 0 0 0 0 ENSG00000246302.1 ENST00000500155.1 chr18:22208146-22242162 3 2318 31694 intergenic 3.27 0 0,0,0 0 0,0,0 149.551768766178 32.621789613176 9.322 117.311475409836 30.1724616646684 31.302 108.584555651424 32.8979933110368 29.087 0 0 cat,chimp,cow,dog,elephant,guinea_pig,horse,human,macaque,marmoset,mouse,orangutan,panda,pig, lincRNA lincRNA A549@0,AG04450@0.0889475,BJ@0.005231,GM12878@0,H1HESC@0,HELAS3@0.013696,HEPG2@0,HMEC@0.003528,HSMM@0.0295155,HUVEC@0,K562@0,MCF7@0,NHEK@0.0196157,NHLF@0.184818,SKNSHRA@0, 0 0 0 0 ENSG00000236721.1 ENST00000431437.1 chr18:24445272-24515910 8 2384 68240 intronic 0.36 0 0,0,0 0 0,0,0 156.466023489933 29.5758206330598 0 183.634228187919 25.1345984759672 30.335 185.50461409396 25.1980070339977 29.65 0 0 chimp,human,macaque,marmoset,orangutan, antisense ambiguous_orf A549@0.007094,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0.01337, 0 0 0 0 ENSG00000227279.1 ENST00000423367.1 chr18:25534483-25543651 3 437 8727 exonic 1.29 0 0,0,1 0 0,0,0 203.04118993135 15.8054314197319 30.504 204.423340961098 22.8545892059127 3.962 235.9176201373 25.8844963905122 4.13 0 0 cat,chimp,dog,elephant,horse,human,macaque,marmoset,mouse,opossum,orangutan,panda,pig,rabbit,rat, antisense antisense A549@0.0210775,AG04450@0.0053525,BJ@0,GM12878@0,H1HESC@0,HELAS3@0.062683,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0.0437037,NHLF@0,SKNSHRA@0.04246, 0 0 0 0 ENSG00000249271.1 ENST00000503999.1 chr18:29992145-29993199 2 855 197 intronic 6.33 0 0,0,1 0 0,0,0 568 568 394.76 400.349707602339 567 209.715 447.811695906433 672 280.226 0 0 cat,chimp,cow,dog,elephant,guinea_pig,horse,human,macaque,marmoset,mouse,opossum,orangutan,panda,pig,rabbit,rat, lincRNA lincRNA A549@0.13279,AG04450@0.226048,BJ@0.126935,GM12878@0.127049,H1HESC@0.353125,HELAS3@0.164494,HEPG2@0.147009,HMEC@0.033445,HSMM@0.009863,HUVEC@0.06197,K562@0.400883,MCF7@0.16737,NHEK@0.0848717,NHLF@0.011308,SKNSHRA@0.303345, 0 0 0 0 ENSG00000249862.1 ENST00000503211.1 chr18:36786888-37331959 4 2143 542922 intergenic -0.96 0 0,0,1 0 0,0,0 114.335510965936 42.3385734967454 86.147 101.420905272982 43.5208464567654 75.058 104.066262249183 45.8256195180892 133.021 0 0 cat,chimp,cow,dog,elephant,guinea_pig,horse,human,macaque,marmoset,mouse,opossum,orangutan,panda,pig,platypus,rabbit,rat, lincRNA lincRNA A549@0.650127,AG04450@0.226394,BJ@0.190086,GM12878@0.101508,H1HESC@0.481359,HELAS3@1.40563,HEPG2@0.469753,HMEC@0.219619,HSMM@0.129008,HUVEC@0.172835,K562@0,MCF7@0.454805,NHEK@0.211291,NHLF@0.134717,SKNSHRA@0, 0 0 0 0 ENSG00000249862.1 ENST00000510201.1 chr18:36786888-37380282 4 2302 591086 intergenic -0.96 0 1,1,1 1 0,0,0 106.438314509123 41.257803433003 0 94.4157254561251 42.4901757104719 0 96.8783666377063 44.8271046852742 105.513 0 0 cat,chimp,cow,dog,elephant,guinea_pig,horse,human,macaque,marmoset,mouse,opossum,orangutan,panda,pig,platypus,rabbit,rat, lincRNA lincRNA A549@0.650127,AG04450@0.226394,BJ@0.190086,GM12878@0.101508,H1HESC@0.481359,HELAS3@1.40563,HEPG2@0.469753,HMEC@0.219619,HSMM@0.129008,HUVEC@0.172835,K562@0,MCF7@0.454805,NHEK@0.211291,NHLF@0.134717,SKNSHRA@0, 0 0 0 0 ENSG00000249862.1 ENST00000502335.1 chr18:36787591-36920602 4 1635 131370 intergenic -6.55 0 0,0,0 0 0,0,0 149.85993883792 38.4591915962549 252.862 132.932721712538 42.7277080003045 426.167 136.4 47.4543807566416 376.683 0 0 cat,chimp,cow,dog,guinea_pig,horse,human,macaque,marmoset,mouse,orangutan,panda,rabbit, lincRNA lincRNA A549@0.650127,AG04450@0.226394,BJ@0.190086,GM12878@0.101508,H1HESC@0.481359,HELAS3@1.40563,HEPG2@0.469753,HMEC@0.219619,HSMM@0.129008,HUVEC@0.172835,K562@0,MCF7@0.454805,NHEK@0.211291,NHLF@0.134717,SKNSHRA@0, 0 0 0 0 ENSG00000248078.1 ENST00000422709.2 chr18:43914928-43917171 2 1455 786 intronic 2.71 0 0,0,0 0 0,0,0 390.182817869416 434.516539440204 490.624 431.854982817869 460.530534351145 518.924 387.442611683849 450.489821882952 545.184 0 0 cat,chimp,cow,dog,elephant,guinea_pig,horse,human,macaque,marmoset,mouse,orangutan,panda,pig,rabbit,rat, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0.0016985,HELAS3@0.019225,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0.0069315, 0 0 0 0 ENSG00000246990.1 ENST00000498862.1 chr18:53443958-53448952 2 4069 923 intergenic 2.42 0 0,1,0 0 0,0,0 6.16613418530351 0 33.026 11.6746129270091 0 31.011 12.058491029737 0 31.37 1 1 chimp,human,macaque,marmoset,orangutan, lincRNA lincRNA A549@0,AG04450@0.0326725,BJ@0.0657175,GM12878@0,H1HESC@0.164437,HELAS3@0,HEPG2@0,HMEC@0.029168,HSMM@0.0473965,HUVEC@0.113721,K562@0.007372,MCF7@0.00101,NHEK@0.033717,NHLF@0.0654755,SKNSHRA@0.127675, 0 0 0 0 ENSG00000249134.1 ENST00000507923.1 chr18:55471012-55474049 2 2868 167 intergenic 8.75 0 0,0,1 0 0,0,0 0 0 20.935 1.610529986053 0 159.124 1.80962343096234 0 166.878 0 1 chimp,human,macaque,orangutan, lincRNA lincRNA A549@0.149618,AG04450@0.273039,BJ@0.294947,GM12878@0.0548515,H1HESC@0.120749,HELAS3@0.0226995,HEPG2@0.024948,HMEC@0.041374,HSMM@0.0890245,HUVEC@0.265596,K562@0.002661,MCF7@0.187371,NHEK@0.0590137,NHLF@0.328286,SKNSHRA@0.255528, 0 0 0 0 ENSG00000179676.6 ENST00000323355.3 chr18:61747243-61816264 4 869 68146 intergenic 4.94 1 0,1,1 0 0,0,0 0 18.3800076306753 55.075 1.17376294591484 18.9331728934934 43.37 1.21979286536249 21.1385114313386 40.398 0 0 chimp,horse,human,macaque,marmoset,orangutan,panda, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@3.55626,H1HESC@0.0028345,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000179676.6 ENST00000454647.1 chr18:61747536-61765844 3 336 17968 intergenic -5.82 0 0,1,0 0 0,0,0 0 20.860195903829 0 0 18.156500445236 0 0 19.0230409617097 0 0 0 chimp,dog,elephant,horse,human,marmoset,orangutan,panda, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@3.55626,H1HESC@0.0028345,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000179676.6 ENST00000456505.1 chr18:61806687-61816108 2 215 9204 intergenic -2.44 1 0,1,0 0 0,0,0 0 8.58050847457627 8.14 0 11.2246849196002 1.434 0 28.3319209039548 1.506 0 0 chimp,human,macaque,marmoset,orangutan, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@3.55626,H1HESC@0.0028345,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000236392.1 ENST00000417298.1 chr18:61814443-61826528 3 634 11447 intergenic 3.35 0 0,0,1 0 0,0,0 9.71608832807571 19.4268367257797 0 7.56624605678233 12.6751113828951 1.052 12.2003154574133 13.2291430069014 1.06 0 0 cat,chimp,cow,dog,elephant,guinea_pig,horse,human,macaque,marmoset,orangutan,panda,pig,rabbit, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0.0669715,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000236392.1 ENST00000452004.1 chr18:61823449-61826533 3 384 2696 intergenic 3.53 0 0,1,1 0 0,0,0 16.0416666666667 23.5905044510386 0 12.4921875 20.2893175074184 0 20.1432291666667 22.8015578635015 0 0 0 cat,chimp,cow,dog,elephant,horse,human,macaque,marmoset,orangutan,panda, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0.0669715,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000246923.1 ENST00000500778.1 chr18:65183783-65566853 5 2983 380079 exonic 2.34 0 0,0,0 0 0,0,0 0 3.41868401042941 38.991 0 4.58065823157817 23.32 1.71069393228294 6.96643592516293 22.886 0 0 cat,chimp,cow,human,macaque,marmoset,orangutan, lincRNA lincRNA A549@0.0020775,AG04450@0.026808,BJ@0.050981,GM12878@0,H1HESC@0.0013885,HELAS3@0.0055575,HEPG2@0,HMEC@0,HSMM@0.0237645,HUVEC@0.0081675,K562@0,MCF7@0,NHEK@0,NHLF@0.0136115,SKNSHRA@0.003319, 0 0 0 0 ENSG00000248402.1 ENST00000511515.1 chr18:68047378-68243317 3 2542 193393 intergenic 2.38 0 0,0,1 0 0,0,0 9.03697875688434 9.76917468574354 171.504 3.54405979543666 6.41117827429121 77.984 4.43941778127459 11.1980836948597 74.368 1 1 chimp,human,macaque,marmoset,orangutan, lincRNA lincRNA A549@0.417477,AG04450@0.0169825,BJ@0.026757,GM12878@0,H1HESC@0,HELAS3@0.136634,HEPG2@0.135361,HMEC@0.030569,HSMM@0.005374,HUVEC@0,K562@0,MCF7@0.19899,NHEK@0.0425993,NHLF@0.04802,SKNSHRA@0.0062465, 0 0 0 0 ENSG00000251565.1 ENST00000507480.1 chr18:70818476-70931538 10 1386 111658 intergenic -1.49 0 0,1,1 1 0,0,0 9.20634920634921 3.12994142828996 0 0 3.60786508803668 0 2.1038961038961 5.58837700836483 0 0 0 chimp,horse,human,marmoset,orangutan, lincRNA lincRNA A549@7.28442,AG04450@0.008474,BJ@0,GM12878@0.088631,H1HESC@0.001128,HELAS3@0.0303815,HEPG2@0.001035,HMEC@0,HSMM@0,HUVEC@0.0337495,K562@5.34111,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0.0010555, 0 0 0 0 ENSG00000251565.1 ENST00000515473.1 chr18:70821294-70931715 6 2629 107782 intergenic 4.07 0 0,1,1 1 0,0,0 0 3.24249874747175 0 0 3.73760924829749 0 0.536325599087105 5.78934330407675 0 1 1 chimp,human,macaque,marmoset,orangutan, lincRNA lincRNA A549@7.28442,AG04450@0.008474,BJ@0,GM12878@0.088631,H1HESC@0.001128,HELAS3@0.0303815,HEPG2@0.001035,HMEC@0,HSMM@0,HUVEC@0.0337495,K562@5.34111,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0.0010555, 0 0 0 0 ENSG00000206029.2 ENST00000382649.2 chr18:72259030-72265071 2 3452 2587 intergenic 12.18 0 1,1,1 1 0,1,0 0 0 141.6 2.20046349942063 0 137.798 2.7077056778679 0 110.634 1 1 chimp,human,macaque,marmoset,orangutan, lincRNA lincRNA A549@0.773354,AG04450@0.930399,BJ@0.826507,GM12878@1.69762,H1HESC@0.603114,HELAS3@1.60276,HEPG2@0.907016,HMEC@0.815562,HSMM@1.16079,HUVEC@0.38327,K562@0.694374,MCF7@0.813148,NHEK@0.8174,NHLF@1.02384,SKNSHRA@1.42435, 0 0 0 0 ENSG00000247544.1 ENST00000501504.1 chr18:74240612-74271783 3 2239 28928 intergenic 10.55 0 1,1,1 0 0,0,0 0 2.72054756637168 17.48 0 1.43480365044248 0 0 4.38654590707965 0 0 1 chimp,human,macaque,orangutan, lincRNA lincRNA A549@0.0019365,AG04450@0.250528,BJ@0.237342,GM12878@0.583078,H1HESC@0.128206,HELAS3@0.048406,HEPG2@0.186404,HMEC@0.003653,HSMM@0.060047,HUVEC@0,K562@0,MCF7@0.025434,NHEK@0.001175,NHLF@0.150731,SKNSHRA@0, 0 0 0 0 ENSG00000247645.1 ENST00000501193.1 chr18:74327169-74337889 2 3500 7218 intergenic 1.41 0 0,0,0 0 0,0,0 1.028 3.91604322527016 21.331 0 4.42033804377944 0 0.666 7.53712939872541 0 1 1 chimp,human,macaque,marmoset,orangutan, lincRNA lincRNA A549@0,AG04450@0.033665,BJ@0.0231845,GM12878@0,H1HESC@0.038171,HELAS3@0,HEPG2@0,HMEC@0.138225,HSMM@0.0028795,HUVEC@0,K562@0,MCF7@0.304282,NHEK@0.079084,NHLF@0.0134475,SKNSHRA@0, 0 0 0 0 ENSG00000247645.1 ENST00000499318.1 chr18:74331734-74335516 2 2219 1561 intergenic 2.12 0 0,0,1 0 0,0,0 0 18.1076233183856 0 4.17079765660207 3.97821909032671 16.441 6.20324470482199 15.6745675848815 18.501 0 0 chimp,horse,human,macaque,orangutan,pig, lincRNA lincRNA A549@0,AG04450@0.033665,BJ@0.0231845,GM12878@0,H1HESC@0.038171,HELAS3@0,HEPG2@0,HMEC@0.138225,HSMM@0.0028795,HUVEC@0,K562@0,MCF7@0.304282,NHEK@0.079084,NHLF@0.0134475,SKNSHRA@0, 0 0 0 0 ENSG00000229055.2 ENST00000415242.1 chr18:74401986-74405592 2 2335 1269 intergenic 2.92 0 0,0,0 0 0,1,0 5.84154175588865 0 0 2.30278372591006 0 0 2.37601713062099 0 0 0 1 chimp,human,macaque,orangutan, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0.0127165,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0.041625,HUVEC@0,K562@0,MCF7@0.0139595,NHEK@0.00338467,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000226924.2 ENST00000424835.1 chr18:77905807-77929616 3 3331 20474 intronic 2.69 0 0,1,0 1 0,1,0 0 11.0652046497997 0 0 13.1223502979388 0 0 19.4454430008792 5.56 0 1 chimp,human, lincRNA lincRNA A549@0.048656,AG04450@0.080286,BJ@0.10247,GM12878@0.0657185,H1HESC@0.180391,HELAS3@0.34144,HEPG2@0.289747,HMEC@0.126096,HSMM@0.0433125,HUVEC@0.0331015,K562@0.031217,MCF7@0.049763,NHEK@0.0570963,NHLF@0.0555805,SKNSHRA@0.264733, 0 0 0 0 ENSG00000176936.2 ENST00000316083.2 chr19:1385158-1389650 5 1754 2730 exonic 7.70 0 0,0,0 0 0,0,0 12.0570125427594 4.67399267399267 0 19.927023945268 2.28095238095238 0 85.4446978335234 3.14249084249084 0 0 1 human,macaque,marmoset,orangutan, antisense antisense A549@0.009527,AG04450@0,BJ@0.0018395,GM12878@0.0167405,H1HESC@0.0794285,HELAS3@0.0012855,HEPG2@0.0098955,HMEC@0,HSMM@0,HUVEC@0.192264,K562@0.004623,MCF7@0,NHEK@0.0101807,NHLF@0.0027585,SKNSHRA@0.0025855, 0 0 0 0 ENSG00000176936.2 ENST00000382445.4 chr19:1385158-1389650 4 1754 2732 exonic 7.70 0 0,0,0 0 0,0,0 12.0570125427594 4.6705710102489 0 19.927023945268 2.27928257686676 0 85.887685290764 3.04538799414348 0 0 1 human,macaque,marmoset,orangutan, antisense antisense A549@0.009527,AG04450@0,BJ@0.0018395,GM12878@0.0167405,H1HESC@0.0794285,HELAS3@0.0012855,HEPG2@0.0098955,HMEC@0,HSMM@0,HUVEC@0.192264,K562@0.004623,MCF7@0,NHEK@0.0101807,NHLF@0.0027585,SKNSHRA@0.0025855, 0 0 0 0 ENSG00000248015.1 ENST00000501448.1 chr19:1392169-1396466 3 3568 725 exonic 13.57 0 0,0,1 0 0,0,0 5.48878923766816 0 18.164 18.9419843049327 0 28.806 24.9470291479821 32.431724137931 48.437 1 1 chimp,human,macaque,marmoset,orangutan, antisense antisense A549@0.102018,AG04450@0.080647,BJ@0.0880385,GM12878@0.12575,H1HESC@0.549625,HELAS3@0.361937,HEPG2@1.34436,HMEC@0.01376,HSMM@0.1181,HUVEC@0.142224,K562@0.156711,MCF7@0.0868385,NHEK@0.00729133,NHLF@0.030192,SKNSHRA@0.369868, 0 0 0 0 ENSG00000253392.1 ENST00000520090.1 chr19:2915144-2917105 2 664 1295 exonic 1.34 0 0,1,0 0 0,0,0 61.585843373494 0 0 39.7183734939759 0 0 45.7921686746988 5.63397683397683 78.897 0 0 cat,chimp,cow,dog,elephant,guinea_pig,horse,human,macaque,marmoset,mouse,opossum,orangutan,panda,pig,rabbit,rat, antisense antisense A549@0.117559,AG04450@0.094211,BJ@0.043602,GM12878@0.0674135,H1HESC@0.0770645,HELAS3@0.119433,HEPG2@0.0575015,HMEC@0.028813,HSMM@0.0396455,HUVEC@0.119381,K562@0.112657,MCF7@0.051884,NHEK@0.031875,NHLF@0.032508,SKNSHRA@0.107145, 0 0 0 0 ENSG00000176840.6 ENST00000540211.1 chr19:4769117-4770196 3 402 673 intergenic 0 0 0,1,1 1 0,0,0 0 0 18.038 25.4900497512438 2.71916790490342 34.863 26.4378109452736 2.75482912332838 29.157 0 0 cat,cow,dog,elephant,horse,human,macaque,marmoset,orangutan,panda, lincRNA lincRNA A549@0.0038905,AG04450@0,BJ@0,GM12878@0,H1HESC@0.002922,HELAS3@0.104581,HEPG2@0.040411,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0.448489, 0 0 0 0 ENSG00000176840.6 ENST00000317292.3 chr19:4769152-4772545 3 707 2682 intergenic -0.94 1 1,1,1 1 0,0,0 0 14.1342281879195 18.038 13.7722772277228 14.9299030574198 35.628 14.2630834512023 15.2013422818792 29.973 0 0 cat,cow,dog,elephant,horse,human,macaque,marmoset,panda, lincRNA lincRNA A549@0.0038905,AG04450@0,BJ@0,GM12878@0,H1HESC@0.002922,HELAS3@0.104581,HEPG2@0.040411,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0.448489, 0 0 0 0 ENSG00000223573.1 ENST00000448587.1 chr19:5558178-5568045 3 3730 6133 intergenic 56.86 1 1,1,1 1 0,0,0 2.83646112600536 0 0 47.9327077747989 1.52046306864503 0 48.7455764075067 1.64601337029186 0 0 0 chimp,human,macaque,orangutan, lincRNA processed_transcript A549@0.28794,AG04450@0.011456,BJ@0.041326,GM12878@0.078013,H1HESC@0.210009,HELAS3@1.22382,HEPG2@0.511888,HMEC@1.15121,HSMM@0.058546,HUVEC@0.0055025,K562@0.0846715,MCF7@9.39626,NHEK@3.19614,NHLF@0.018906,SKNSHRA@0.146346, 0 0 0 0 ENSG00000249707.2 ENST00000543301.1 chr19:5836244-5839733 2 2699 788 exonic 0.01 0 0,0,1 0 0,0,0 0 0 0 1.06261578362356 0 0 1.08040014820304 0 0 0 1 chimp,human,macaque,orangutan, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0.0019665,H1HESC@0.001536,HELAS3@0.04018,HEPG2@0.034385,HMEC@0,HSMM@0,HUVEC@0.0018005,K562@0.002018,MCF7@0.0014885,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000248217.1 ENST00000512667.1 chr19:7852370-7855898 7 1928 1588 intergenic 35.14 0 1,1,1 0 0,0,0 0 0 0 23.2271784232365 2.76574307304786 0 32.25622406639 3.6139798488665 0 0 1 chimp,human,macaque,marmoset, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0.335578,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0.0033045,HUVEC@2.4824,K562@0.0149055,MCF7@0.004203,NHEK@0,NHLF@0.0020165,SKNSHRA@0, 0 0 0 0 ENSG00000246974.1 ENST00000499780.1 chr19:8374177-8384444 2 1738 8527 intronic -0.56 0 0,0,0 0 0,0,0 0 5.79547320276768 0 1.71231300345224 9.91122317344904 6.714 1.78826237054085 11.7850357687346 114.8 1 1 chimp,human,macaque,marmoset,orangutan, lincRNA lincRNA A549@0.010704,AG04450@0.003403,BJ@0.0112225,GM12878@0.079268,H1HESC@0.0316635,HELAS3@0.096362,HEPG2@0.149787,HMEC@0,HSMM@0,HUVEC@0.121396,K562@0.046787,MCF7@0.0070375,NHEK@0,NHLF@0,SKNSHRA@0.192752, 0 0 0 0 ENSG00000247585.2 ENST00000455223.3 chr19:9649409-9650402 2 585 406 intergenic -2.78 0 1,1,1 1 0,0,0 0 0 0 0 0 0 0 0 0 0 1 chimp,human,macaque,orangutan, lincRNA lincRNA A549@0.0894135,AG04450@0.460618,BJ@0.24646,GM12878@0.064051,H1HESC@2.01675,HELAS3@0.625877,HEPG2@1.30296,HMEC@0.3418,HSMM@0.622681,HUVEC@0.281066,K562@0.631541,MCF7@0,NHEK@0.526496,NHLF@0.542237,SKNSHRA@0.524814, 0 0 0 0 ENSG00000245884.1 ENST00000501797.1 chr19:9732181-9745397 3 1590 11622 intergenic 0.64 0 1,1,1 1 0,0,1 0 0 0 0 0 0 0 0 0 1 1 chimp,human,macaque,marmoset,orangutan, lincRNA lincRNA A549@0.346384,AG04450@1.37681,BJ@1.16485,GM12878@0.704452,H1HESC@1.21618,HELAS3@0.434757,HEPG2@0.363637,HMEC@1.51163,HSMM@0.75209,HUVEC@0.214398,K562@0.43694,MCF7@0.615467,NHEK@1.56156,NHLF@1.35943,SKNSHRA@2.19133, 0 0 0 0 ENSG00000245884.1 ENST00000498993.1 chr19:9732193-9745538 4 1795 11544 intergenic 0.64 0 0,1,0 1 0,0,1 0 0 0 0 0 0 0 0 0 1 1 chimp,human,macaque,marmoset,orangutan, lincRNA lincRNA A549@0.346384,AG04450@1.37681,BJ@1.16485,GM12878@0.704452,H1HESC@1.21618,HELAS3@0.434757,HEPG2@0.363637,HMEC@1.51163,HSMM@0.75209,HUVEC@0.214398,K562@0.43694,MCF7@0.615467,NHEK@1.56156,NHLF@1.35943,SKNSHRA@2.19133, 0 0 0 0 ENSG00000247118.1 ENST00000499903.1 chr19:11637552-11639940 2 2274 112 exonic 1.11 0 0,0,1 0 0,0,0 0 0 0 4.62445030782762 0 0 4.67194371152155 0 0 1 1 chimp,human,macaque,marmoset,orangutan, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0.008876,H1HESC@0,HELAS3@0,HEPG2@0.002397,HMEC@0,HSMM@0,HUVEC@0,K562@0.00479,MCF7@0.0277495,NHEK@0,NHLF@0,SKNSHRA@0.0019935, 0 0 0 0 ENSG00000234773.1 ENST00000415793.1 chr19:12305830-12318512 2 493 12187 intergenic 13.99 0 0,1,0 1 0,0,0 0 0 0 10.8620689655172 1.71838844670551 0 85.5496957403651 26.9699679986871 0 0 0 cat,chimp,cow,dog,elephant,guinea_pig,horse,human,macaque,marmoset,mouse,opossum,orangutan,panda,pig,platypus,rabbit,rat, lincRNA processed_transcript A549@0,AG04450@0.159927,BJ@0.049355,GM12878@0.037108,H1HESC@0.512274,HELAS3@0.0666205,HEPG2@0.0987255,HMEC@0.450035,HSMM@0.022586,HUVEC@0.0908715,K562@0.0164215,MCF7@0,NHEK@0.357649,NHLF@0.087531,SKNSHRA@0.51076, 0 0 0 0 ENSG00000234773.1 ENST00000440004.1 chr19:12305830-12348247 2 470 41945 intergenic 9.03 0 0,1,1 1 0,0,0 0 0 0 0 0.744808678030755 0 0 16.4668256049589 0 0 0 chimp,guinea_pig,horse,human,macaque,marmoset,orangutan,panda,pig,rabbit, lincRNA processed_transcript A549@0,AG04450@0.159927,BJ@0.049355,GM12878@0.037108,H1HESC@0.512274,HELAS3@0.0666205,HEPG2@0.0987255,HMEC@0.450035,HSMM@0.022586,HUVEC@0.0908715,K562@0.0164215,MCF7@0,NHEK@0.357649,NHLF@0.087531,SKNSHRA@0.51076, 0 0 0 0 ENSG00000234773.1 ENST00000426044.1 chr19:12305832-12348582 3 914 41832 intergenic 9.03 0 0,1,0 1 0,0,0 0 0 0 0 0.746820615796519 0 4.63894967177243 16.5113071332951 0 0 0 cat,chimp,cow,dog,elephant,guinea_pig,horse,human,macaque,marmoset,orangutan,panda,pig,rabbit, lincRNA processed_transcript A549@0,AG04450@0.159927,BJ@0.049355,GM12878@0.037108,H1HESC@0.512274,HELAS3@0.0666205,HEPG2@0.0987255,HMEC@0.450035,HSMM@0.022586,HUVEC@0.0908715,K562@0.0164215,MCF7@0,NHEK@0.357649,NHLF@0.087531,SKNSHRA@0.51076, 0 0 0 0 ENSG00000234773.1 ENST00000451691.1 chr19:12305903-12319194 5 576 12707 intergenic 1.82 0 0,1,0 1 0,0,0 0 0 0 9.296875 1.64806799401904 0 72.8611111111111 26.6299677343197 0 0 0 cat,chimp,cow,dog,guinea_pig,horse,human,macaque,marmoset,opossum,orangutan,panda,pig,rabbit,rat, lincRNA processed_transcript A549@0,AG04450@0.159927,BJ@0.049355,GM12878@0.037108,H1HESC@0.512274,HELAS3@0.0666205,HEPG2@0.0987255,HMEC@0.450035,HSMM@0.022586,HUVEC@0.0908715,K562@0.0164215,MCF7@0,NHEK@0.357649,NHLF@0.087531,SKNSHRA@0.51076, 0 0 0 0 ENSG00000234848.1 ENST00000420038.1 chr19:12561749-12571519 3 692 9074 intergenic 3.88 0 0,0,0 0 0,0,0 0 0 0 0 0 0 0 1.02490632576592 0 0 0 chimp,human,macaque,orangutan, antisense antisense A549@0,AG04450@0,BJ@0.010296,GM12878@0.170355,H1HESC@0.0119395,HELAS3@0.0180175,HEPG2@0.443675,HMEC@0,HSMM@0,HUVEC@0.004282,K562@0,MCF7@0.008875,NHEK@0.00379067,NHLF@0,SKNSHRA@0.022545, 0 0 0 0 ENSG00000230310.1 ENST00000414548.1 chr19:12663411-12664458 2 541 504 intergenic -3.18 1 0,0,0 0 0,0,0 0 0 0 0 0 0 0 0 0 0 0 chimp,human,macaque,marmoset,orangutan,rabbit, antisense antisense A549@0.0152605,AG04450@0.01672,BJ@0.01337,GM12878@0.157096,H1HESC@0.0496545,HELAS3@0.115546,HEPG2@0.115712,HMEC@0,HSMM@0.023962,HUVEC@0.029507,K562@0.122943,MCF7@0.0667435,NHEK@0.0903763,NHLF@0.0391675,SKNSHRA@0.242979, 0 0 0 0 ENSG00000248045.1 ENST00000498856.1 chr19:14247991-14282071 3 2853 31223 exonic 1.14 0 1,1,1 1 0,0,0 63.708026638626 91.1608429683246 55.622 84.3214160532772 113.959741216411 137.995 98.4262180161234 118.536879864203 144.41 0 0 chimp,cow,dog,human,macaque,marmoset,orangutan,panda,pig, lincRNA lincRNA A549@0.175695,AG04450@0.327437,BJ@0.419015,GM12878@0.200168,H1HESC@0.0633,HELAS3@0.570553,HEPG2@0.480491,HMEC@0.10466,HSMM@0.268114,HUVEC@0.443995,K562@0.262077,MCF7@0.282727,NHEK@0.148938,NHLF@0.457935,SKNSHRA@0.322395, 0 0 0 0 ENSG00000246896.2 ENST00000499938.2 chr19:15050246-16748905 7 1486 1697161 intronic -3.99 0 0,0,0 0 0,0,0 0 11.9521789623966 0 0 19.0747271472771 0 2.5464333781965 27.1234007851937 0 0 1 human,macaque,orangutan, lincRNA lincRNA A549@0.0016775,AG04450@0.004451,BJ@0.0014315,GM12878@0,H1HESC@0,HELAS3@0.002956,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0.005639,MCF7@0.002478,NHEK@0,NHLF@0,SKNSHRA@0.0046585, 0 0 0 0 ENSG00000214049.3 ENST00000397381.3 chr19:15939757-15947130 3 2310 5059 intergenic 5.60 1 0,1,1 0 0,1,0 0 0 0 0 0 0 0 0 0 0 1 chimp,human,macaque,orangutan, lincRNA non_coding A549@0,AG04450@0,BJ@0,GM12878@0.0058695,H1HESC@0.0058565,HELAS3@41.233,HEPG2@7.17131,HMEC@1.25807,HSMM@0,HUVEC@0.210445,K562@37.6175,MCF7@0.159414,NHEK@0.191509,NHLF@0.0018445,SKNSHRA@0, 0 0 0 0 ENSG00000250388.1 ENST00000509303.1 chr19:15940172-15946228 2 1587 4467 intergenic 0.38 0 0,1,0 0 0,0,0 0 0 0 0 0 0 0 0 0 1 1 chimp,human,macaque,marmoset,orangutan, lincRNA lincRNA A549@0.008196,AG04450@0.0149045,BJ@0.0045035,GM12878@0.001671,H1HESC@0,HELAS3@0.111943,HEPG2@0.0333795,HMEC@0,HSMM@0,HUVEC@0,K562@0.074201,MCF7@0.218195,NHEK@0.006533,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000228642.2 ENST00000434276.1 chr19:19867185-19887189 5 2075 17921 intergenic 11.69 0 0,1,0 1 0,1,0 0 0 0 0 3.08727191562971 0 0 11.4332905529825 0 1 1 chimp,human,macaque,marmoset,orangutan, lincRNA lincRNA A549@0.106908,AG04450@0.427968,BJ@0.386547,GM12878@0.514156,H1HESC@0.335942,HELAS3@0.0855445,HEPG2@0.207114,HMEC@0.347361,HSMM@0.243229,HUVEC@0.197343,K562@0.281717,MCF7@0.144775,NHEK@0.305566,NHLF@0.170892,SKNSHRA@2.16348, 0 0 0 0 ENSG00000228642.2 ENST00000536451.1 chr19:19868175-19887202 3 1354 17669 intergenic 11.69 0 0,1,0 1 0,1,0 0 0 0 0 3.13130341275681 0 0 11.59635519837 0 1 1 chimp,human,macaque,marmoset,orangutan, lincRNA lincRNA A549@0.106908,AG04450@0.427968,BJ@0.386547,GM12878@0.514156,H1HESC@0.335942,HELAS3@0.0855445,HEPG2@0.207114,HMEC@0.347361,HSMM@0.243229,HUVEC@0.197343,K562@0.281717,MCF7@0.144775,NHEK@0.305566,NHLF@0.170892,SKNSHRA@2.16348, 0 0 0 0 ENSG00000245381.1 ENST00000499171.1 chr19:19945686-20008579 3 4284 58605 exonic 0.78 0 0,0,0 0 0,0,0 0 0 0 0 0 0 40.3214285714286 26.659585359611 34.272 1 1 chimp,human,macaque,marmoset,orangutan, lincRNA lincRNA A549@0,AG04450@0.0125255,BJ@0.0081685,GM12878@0.010594,H1HESC@0.0167585,HELAS3@0,HEPG2@0.004039,HMEC@0,HSMM@0,HUVEC@0.0048915,K562@0.018227,MCF7@0.00712,NHEK@0.001807,NHLF@0,SKNSHRA@0.014537, 0 0 0 0 ENSG00000249756.1 ENST00000504832.1 chr19:21634858-21646686 2 4672 7154 intergenic 0.52 0 0,1,0 1 0,0,0 0 0 0 0 0 0 0 0 0 1 1 chimp,human,macaque,marmoset,orangutan, lincRNA lincRNA A549@0,AG04450@0.0010075,BJ@0,GM12878@0.0026245,H1HESC@2.48193,HELAS3@0.0107165,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0.009155,K562@1.82656,MCF7@0.157318,NHEK@0.000833667,NHLF@0.006398,SKNSHRA@0.15645, 0 0 0 0 ENSG00000249473.1 ENST00000509103.1 chr19:21753139-21770045 2 1582 15322 intergenic 1.94 0 0,1,1 1 0,0,0 0 7.29721968411435 0 0 4.00013053126224 0 0 4.53537397206631 0 0 1 chimp,human,orangutan, lincRNA lincRNA A549@0,AG04450@0.003738,BJ@0,GM12878@0,H1HESC@0.621901,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0.004177,HUVEC@0.0906375,K562@0,MCF7@0.002596,NHEK@0,NHLF@0,SKNSHRA@0.011469, 0 0 0 0 ENSG00000249576.1 ENST00000504760.1 chr19:21769596-21905511 6 3663 132242 intergenic 3.22 0 0,0,0 0 0,0,0 0 0.655434733291995 0 0 1.35987054037295 0 11.970515970516 8.94991001346017 0 0 1 chimp,human, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0.0591135,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0.0038105,K562@0.0027515,MCF7@0.0317235,NHEK@0,NHLF@0,SKNSHRA@0.010232, 0 0 0 0 ENSG00000251067.1 ENST00000507159.1 chr19:21770235-21776808 2 2406 4165 intergenic 2.78 0 0,1,1 0 0,0,0 0 0 0 0 0 0 0 0 0 0 1 chimp,human, lincRNA lincRNA A549@0.0084035,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0.0421205,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0.0018875, 0 0 0 0 ENSG00000246181.1 ENST00000499882.1 chr19:23582041-23598873 5 2376 14448 intergenic 1.73 0 0,1,0 1 0,0,0 0 0 0 0 0 0 0 21.2387873754153 0 1 1 chimp,human,macaque,marmoset,orangutan, lincRNA lincRNA A549@0.0025615,AG04450@0,BJ@0.0020505,GM12878@0.276896,H1HESC@21.7883,HELAS3@0,HEPG2@0,HMEC@0.096293,HSMM@0.0421145,HUVEC@0.0033925,K562@0.003046,MCF7@0,NHEK@0.0118513,NHLF@0.0156195,SKNSHRA@0.566393, 0 0 0 0 ENSG00000246181.1 ENST00000501220.1 chr19:23582272-23590900 8 2765 5849 intergenic 1.73 0 0,0,0 0 0,0,0 0 0 0 0 0 0 0 0 219.478 0 0 NA lincRNA lincRNA A549@0.0025615,AG04450@0,BJ@0.0020505,GM12878@0.276896,H1HESC@21.7883,HELAS3@0,HEPG2@0,HMEC@0.096293,HSMM@0.0421145,HUVEC@0.0033925,K562@0.003046,MCF7@0,NHEK@0.0118513,NHLF@0.0156195,SKNSHRA@0.566393, 0 0 0 0 ENSG00000247687.1 ENST00000500569.1 chr19:28281402-28284848 3 2047 1395 intergenic 2.95 0 1,1,1 1 0,0,0 0 0 0 0 0 0 0 0 0 1 1 chimp,human,macaque,marmoset,orangutan, lincRNA lincRNA A549@4.86318,AG04450@0.95962,BJ@1.37874,GM12878@1.12092,H1HESC@1.15746,HELAS3@3.44185,HEPG2@2.0339,HMEC@1.57943,HSMM@1.37938,HUVEC@0.844116,K562@1.85173,MCF7@0.84001,NHEK@1.07226,NHLF@1.00508,SKNSHRA@1.34573, 0 0 0 0 ENSG00000233391.2 ENST00000444167.2 chr19:28284402-28297684 2 1327 11953 intergenic 6.40 0 1,1,1 1 0,0,0 0 0 0 0 0 0 571.842501883949 44.8303354806325 0 0 0 chimp,guinea_pig,human,macaque,marmoset,orangutan, lincRNA lincRNA A549@5.99151,AG04450@0.948205,BJ@2.06321,GM12878@1.79944,H1HESC@3.50353,HELAS3@4.59964,HEPG2@3.56698,HMEC@3.27001,HSMM@1.98368,HUVEC@1.61693,K562@2.30714,MCF7@1.30181,NHEK@2.51815,NHLF@1.37337,SKNSHRA@2.92657, 0 0 0 0 ENSG00000250689.1 ENST00000511462.1 chr19:28926300-29218587 10 3098 289171 intergenic 8.05 0 0,1,1 1 0,0,0 19.5855390574564 2.01718706232644 0 73.4506132989025 8.83768427677741 19.211 106.237572627502 14.5987529869869 23.726 0 1 human,marmoset,orangutan, lincRNA lincRNA A549@0,AG04450@0.0110795,BJ@0.055518,GM12878@1.16359,H1HESC@1.76234,HELAS3@0.099748,HEPG2@0.016578,HMEC@0.007905,HSMM@0.0447825,HUVEC@0.14003,K562@24.9923,MCF7@0,NHEK@0.0184533,NHLF@0.004367,SKNSHRA@0.0032495, 0 0 0 0 ENSG00000245448.2 ENST00000535449.1 chr19:29777925-30016661 10 2567 236151 intergenic 12.12 0 0,0,0 0 0,0,0 16.3817686014803 5.34471588094058 200.645 42.6061550447994 9.79739234642242 297.843 43.0214257888586 15.3663715165297 248.419 0 1 chimp,human,marmoset,orangutan, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0.005451,HELAS3@0,HEPG2@0,HMEC@0.137352,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000249530.1 ENST00000509808.1 chr19:32880959-32896445 3 945 14537 intergenic -15.12 0 1,1,1 1 0,1,0 0 0 0 4 1.21304258100021 37.21 2.94179894179894 1.6382334732063 40.815 1 1 chimp,human,macaque,marmoset,orangutan, lincRNA lincRNA A549@2.00762,AG04450@0.617267,BJ@0.564767,GM12878@0.664225,H1HESC@1.85437,HELAS3@1.15316,HEPG2@0.762941,HMEC@0.27643,HSMM@0.638168,HUVEC@0.300695,K562@0.740648,MCF7@0.654764,NHEK@0.175185,NHLF@0.261396,SKNSHRA@1.90704, 0 0 0 0 ENSG00000256946.1 ENST00000541350.1 chr19:35396219-35399092 2 1655 1216 intergenic 3.24 0 0,0,0 0 0,0,0 0 0 0 0 0 0 0 0 0 0 0 chimp,horse,human,orangutan, lincRNA lincRNA A549@0.0203535,AG04450@0,BJ@0,GM12878@0,H1HESC@0.380838,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0.003695,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000233214.1 ENST00000413796.1 chr19:35914964-35915554 2 448 140 intergenic -11.82 0 0,0,0 0 0,1,0 0 0 0 0 0 0 0 0 0 0 1 chimp,human,macaque,orangutan, antisense antisense A549@0,AG04450@0,BJ@0,GM12878@0.011802,H1HESC@0,HELAS3@0,HEPG2@0.0379775,HMEC@0,HSMM@0,HUVEC@0,K562@0.010916,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000232680.1 ENST00000428426.1 chr19:35923859-35924720 2 374 485 intergenic -1.79 0 0,0,0 0 0,0,0 0 0 0 0 5.25773195876289 0 0 5.4639175257732 0 0 0 chimp,human,macaque,marmoset,orangutan,panda, antisense antisense A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0.104157,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000236144.1 ENST00000444728.1 chr19:36032862-36036405 3 484 3055 exonic 5.87 0 0,1,0 1 0,0,0 0 43.4890343698854 5.586 91.5847107438017 78.2857610474632 135.569 92.4318181818182 102.026841243863 135.658 0 0 cat,chimp,cow,elephant,human,macaque,marmoset,orangutan,rabbit, antisense antisense A549@5.26684,AG04450@0.914976,BJ@1.38194,GM12878@2.65128,H1HESC@10.352,HELAS3@6.07346,HEPG2@4.30195,HMEC@1.9254,HSMM@2.396,HUVEC@1.10947,K562@6.44344,MCF7@3.67596,NHEK@2.15471,NHLF@2.54168,SKNSHRA@3.92495, 0 0 0 0 ENSG00000224910.1 ENST00000453968.1 chr19:36088809-36092403 3 359 3231 intergenic 13.38 0 0,0,1 0 0,0,0 0 0 0 0.710306406685237 0.31569173630455 0 0.721448467966574 0.320643763540699 0 0 0 dog,guinea_pig,human,orangutan,panda,rabbit, lincRNA lincRNA A549@0,AG04450@0.016356,BJ@0,GM12878@0.01295,H1HESC@0.067979,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0.006414,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000226510.1 ENST00000443196.1 chr19:36158850-36164193 2 793 4548 exonic 17.53 0 1,1,1 1 0,0,0 20.6910466582598 0.386543535620053 31.185 143.606557377049 1.93799472295515 57.396 151.755359394704 2.15127528583993 59.366 0 0 chimp,cow,horse,human,macaque,marmoset,orangutan,panda,pig,rat, antisense antisense A549@0.219332,AG04450@0.0145255,BJ@0.404586,GM12878@0.525679,H1HESC@2.76645,HELAS3@0.304525,HEPG2@1.02078,HMEC@0.211169,HSMM@0.017204,HUVEC@0.0302655,K562@0.031235,MCF7@0.053967,NHEK@0.0982723,NHLF@0.10221,SKNSHRA@0.305192, 0 0 0 0 ENSG00000226120.1 ENST00000450758.1 chr19:36198272-36199158 2 345 539 intergenic 0 0 0,0,0 0 0,0,0 0 0 0 0 0 3.682 0 0 5.44 0 0 chimp,human,macaque,orangutan,rabbit, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000225872.1 ENST00000433059.1 chr19:36279778-36288787 8 2159 6836 intergenic 9.22 0 1,1,1 0 0,0,0 45.7369152385364 11.0905500292569 0 84.9319129226494 39.5699239321241 0 93.918480778138 43.2633118782914 0 0 0 cat,chimp,cow,dog,guinea_pig,human,macaque,marmoset,mouse,orangutan,panda,pig,rat, lincRNA processed_transcript A549@0.0020035,AG04450@0,BJ@0,GM12878@0,H1HESC@0.166976,HELAS3@0.065491,HEPG2@0.204358,HMEC@0.003779,HSMM@0,HUVEC@0.0038685,K562@0.003525,MCF7@0.002833,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000232677.1 ENST00000427868.1 chr19:36804644-36813112 5 457 8003 intergenic -7.00 0 0,1,0 0 0,0,0 0 0 0 0 0 0 0 0 0 0 0 chimp,human,macaque,marmoset,orangutan,rabbit, lincRNA lincRNA A549@0.0329385,AG04450@0.124474,BJ@0.133719,GM12878@0.0061385,H1HESC@1.37264,HELAS3@0.005485,HEPG2@0.020586,HMEC@0.038501,HSMM@0.040914,HUVEC@0.0896195,K562@0.118067,MCF7@0.020027,NHEK@0.604014,NHLF@0.017753,SKNSHRA@0.686112, 0 0 0 0 ENSG00000232677.1 ENST00000412740.1 chr19:36806262-36813127 5 470 6387 intergenic -7.00 0 0,1,0 0 0,0,0 0 0 0 0 0 0 0 0 0 0 0 chimp,human,macaque,marmoset,orangutan, lincRNA lincRNA A549@0.0329385,AG04450@0.124474,BJ@0.133719,GM12878@0.0061385,H1HESC@1.37264,HELAS3@0.005485,HEPG2@0.020586,HMEC@0.038501,HSMM@0.040914,HUVEC@0.0896195,K562@0.118067,MCF7@0.020027,NHEK@0.604014,NHLF@0.017753,SKNSHRA@0.686112, 0 0 0 0 ENSG00000232677.1 ENST00000438368.1 chr19:36811507-36822602 5 756 10331 intergenic 9.38 0 0,1,0 1 0,0,0 0 0 0 0 0 0 0 3.36540509147227 0 0 0 chimp,human,macaque,marmoset,orangutan, lincRNA lincRNA A549@0.0329385,AG04450@0.124474,BJ@0.133719,GM12878@0.0061385,H1HESC@1.37264,HELAS3@0.005485,HEPG2@0.020586,HMEC@0.038501,HSMM@0.040914,HUVEC@0.0896195,K562@0.118067,MCF7@0.020027,NHEK@0.604014,NHLF@0.017753,SKNSHRA@0.686112, 0 0 0 0 ENSG00000232677.1 ENST00000449434.1 chr19:36812205-36813242 2 401 634 intergenic -8.58 0 0,0,1 0 0,0,0 0 0 0 0 0 0 0 0 0 0 0 chimp,human,macaque,marmoset,orangutan, lincRNA lincRNA A549@0.0329385,AG04450@0.124474,BJ@0.133719,GM12878@0.0061385,H1HESC@1.37264,HELAS3@0.005485,HEPG2@0.020586,HMEC@0.038501,HSMM@0.040914,HUVEC@0.0896195,K562@0.118067,MCF7@0.020027,NHEK@0.604014,NHLF@0.017753,SKNSHRA@0.686112, 1 96 0 0 ENSG00000228629.2 ENST00000446262.1 chr19:37019220-37026137 3 431 6482 exonic -1.84 0 0,0,1 0 0,0,0 0 11.3717988275224 0 10.614849187935 1.52792348040728 17.059 10.754060324826 5.41792656587473 16.909 0 0 horse,human,orangutan, antisense antisense A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0.00478,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000239208.1 ENST00000452073.1 chr19:37025676-37038666 2 393 12595 exonic -1.84 0 0,1,1 0 0,0,0 224.24427480916 27.9396585946804 0 108.580152671756 21.7345772131798 0 103.389312977099 17.574593092497 0 0 0 cat,chimp,cow,dog,elephant,guinea_pig,horse,human,macaque,marmoset,mouse,opossum,orangutan,panda,pig,platypus,rabbit,rat, antisense antisense A549@0.017983,AG04450@0,BJ@0.0061265,GM12878@0.07299,H1HESC@0,HELAS3@0,HEPG2@0.0138115,HMEC@0,HSMM@0,HUVEC@0,K562@0.0486045,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000225975.1 ENST00000425254.1 chr19:37176216-37178312 3 963 1129 intergenic 2.31 0 0,1,0 1 0,0,0 0 0 0 0 6.98848538529672 15.538 0 17.1957484499557 15.731 0 0 cat,chimp,dog,horse,human,macaque,orangutan,panda, antisense antisense A549@0.875809,AG04450@0.251933,BJ@0.311616,GM12878@1.15123,H1HESC@0.225041,HELAS3@0.836025,HEPG2@0.676771,HMEC@0.250558,HSMM@0.85163,HUVEC@0.190479,K562@0.553751,MCF7@0.671288,NHEK@0.205567,NHLF@0.418177,SKNSHRA@1.09831, 0 0 0 0 ENSG00000225975.1 ENST00000433232.1 chr19:37176342-37178351 4 550 1453 intergenic -0.79 0 0,1,0 1 0,0,0 0 0 0 0 5.4301445285616 15.538 0 13.3613214039917 15.731 0 0 cat,chimp,dog,human,macaque,orangutan,panda, antisense antisense A549@0.875809,AG04450@0.251933,BJ@0.311616,GM12878@1.15123,H1HESC@0.225041,HELAS3@0.836025,HEPG2@0.676771,HMEC@0.250558,HSMM@0.85163,HUVEC@0.190479,K562@0.553751,MCF7@0.671288,NHEK@0.205567,NHLF@0.418177,SKNSHRA@1.09831, 0 0 0 0 ENSG00000244997.1 ENST00000500464.1 chr19:37264055-37267978 2 1846 2075 intergenic 10.07 0 0,1,0 1 0,0,0 0 0 0 0 10.3980722891566 0 0 11.110843373494 0 0 0 human, lincRNA lincRNA A549@0,AG04450@0.03872,BJ@0.0318375,GM12878@0.208112,H1HESC@1.34353,HELAS3@0.006963,HEPG2@0.04214,HMEC@0.113001,HSMM@0.067789,HUVEC@0.108925,K562@0.010342,MCF7@0.0099145,NHEK@0.150928,NHLF@0.0209525,SKNSHRA@0.361796, 0 0 0 0 ENSG00000247207.1 ENST00000500219.1 chr19:37288420-37295590 4 1936 5228 intergenic 12.53 0 0,1,0 1 0,0,0 0 0 0 0 0 0 0 2.78462127008416 0 0 1 chimp,human,marmoset, lincRNA lincRNA A549@0.216755,AG04450@0.398206,BJ@0.383524,GM12878@0.105976,H1HESC@0.979499,HELAS3@0.0236675,HEPG2@0.036283,HMEC@0.040278,HSMM@0.258297,HUVEC@0.240289,K562@0,MCF7@0.968051,NHEK@0.668755,NHLF@0.227916,SKNSHRA@0.966813, 0 0 0 0 ENSG00000247207.1 ENST00000501367.1 chr19:37288465-37319003 4 846 29686 exonic 12.53 0 1,1,1 1 0,0,0 18.3605200945626 24.1661726066159 0 6.49054373522459 5.43565990702688 0 11.4267139479905 16.3371286128141 0 0 1 chimp,human, lincRNA lincRNA A549@0.216755,AG04450@0.398206,BJ@0.383524,GM12878@0.105976,H1HESC@0.979499,HELAS3@0.0236675,HEPG2@0.036283,HMEC@0.040278,HSMM@0.258297,HUVEC@0.240289,K562@0,MCF7@0.968051,NHEK@0.668755,NHLF@0.227916,SKNSHRA@0.966813, 0 0 0 0 ENSG00000254435.1 ENST00000532488.1 chr19:37341779-37342418 2 416 221 exonic -4.24 0 0,0,1 0 0,0,0 0 0 0 3.57692307692308 0 17.511 3.62019230769231 0 20.792 0 0 cat,chimp,cow,dog,horse,human,macaque,marmoset,mouse,opossum,orangutan,panda,pig,rabbit,rat, antisense antisense A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0.039915, 0 0 0 0 ENSG00000229576.1 ENST00000425301.1 chr19:37726504-37726976 2 168 302 exonic 0 0 0,0,0 0 0,0,0 311.47619047619 0 4.264 515.922619047619 44.0298013245033 4.788 431.494047619048 42.5264900662252 4.806 0 0 cat,chimp,cow,dog,elephant,guinea_pig,horse,human,macaque,marmoset,mouse,opossum,orangutan,panda,pig,rabbit,rat, antisense antisense A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0.0132915,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000226686.1 ENST00000438770.1 chr19:37742828-37747421 3 459 4130 intergenic -2.43 0 0,1,0 1 0,0,0 0 0 0 0 0 0 0 8.32469733656174 75.828 0 0 chimp,human,macaque,marmoset,orangutan, lincRNA processed_transcript A549@0.019416,AG04450@0.068675,BJ@0.304312,GM12878@0.118581,H1HESC@0,HELAS3@0,HEPG2@0.0046115,HMEC@0.044314,HSMM@0.191902,HUVEC@0.0576085,K562@0.005026,MCF7@0.026406,NHEK@0.132126,NHLF@0.236645,SKNSHRA@0.579709, 0 0 0 0 ENSG00000225868.1 ENST00000433142.1 chr19:38315798-38345836 5 626 29404 intergenic 12.36 0 0,1,0 0 0,0,0 17.5718849840256 11.9717385389743 0 48.7987220447284 19.7067065705346 0 63.9329073482428 18.4988436947354 0 0 0 cat,chimp,cow,dog,elephant,horse,human,macaque,marmoset,mouse,orangutan,pig,rabbit, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0.197497,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0.0162705,MCF7@0,NHEK@0.0125257,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000229481.1 ENST00000443870.1 chr19:38320191-38322797 1 2606 0 intergenic 5.43 0 0,0,0 0 0,0,0 127.18073676132 0 20.584 185.963545663853 0 52.577 175.364927091328 0 41.164 0 0 cat,chimp,cow,dog,elephant,guinea_pig,horse,human,macaque,marmoset,mouse,opossum,orangutan,panda,pig,rabbit, lincRNA lincRNA A549@0,AG04450@0.05713,BJ@0.031917,GM12878@0,H1HESC@1.37455,HELAS3@0,HEPG2@0,HMEC@0.009424,HSMM@0.006825,HUVEC@0.008715,K562@0,MCF7@0.002692,NHEK@0.0827023,NHLF@0.025314,SKNSHRA@0.335705, 0 0 0 0 ENSG00000226025.3 ENST00000455832.3 chr19:40170014-40176361 4 2580 3761 intergenic 8.99 0 0,1,0 0 0,0,0 0 0 0 0 0 0 0 0 0 0 0 human,marmoset,orangutan, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@4.29101,H1HESC@0.100252,HELAS3@0.0012935,HEPG2@0.001204,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0.004476,NHEK@0.000706333,NHLF@0,SKNSHRA@0.001258, 0 0 0 0 ENSG00000226025.3 ENST00000412609.1 chr19:40170014-40177008 6 2556 4428 intergenic 8.99 0 1,1,1 0 0,0,0 0 0 0 0 0 0 0 0 0 0 0 human,marmoset,orangutan, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@4.29101,H1HESC@0.100252,HELAS3@0.0012935,HEPG2@0.001204,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0.004476,NHEK@0.000706333,NHLF@0,SKNSHRA@0.001258, 0 0 0 0 ENSG00000226025.3 ENST00000458539.1 chr19:40170033-40175891 2 1805 4051 intergenic 2.68 0 0,1,0 0 0,0,0 0 0 0 0 0 0 0 0 0 0 0 chimp,human,marmoset,orangutan, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@4.29101,H1HESC@0.100252,HELAS3@0.0012935,HEPG2@0.001204,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0.004476,NHEK@0.000706333,NHLF@0,SKNSHRA@0.001258, 0 0 0 0 ENSG00000226025.3 ENST00000456368.1 chr19:40175884-40185217 2 287 9044 intergenic -4.35 0 0,0,0 0 0,0,0 0 0 0 0 0 0 0 0 0 0 0 chimp,human,macaque,marmoset,orangutan,pig, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@4.29101,H1HESC@0.100252,HELAS3@0.0012935,HEPG2@0.001204,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0.004476,NHEK@0.000706333,NHLF@0,SKNSHRA@0.001258, 0 0 0 0 ENSG00000249523.1 ENST00000511958.1 chr19:41285685-41302848 3 1100 16059 exonic -1.01 0 0,1,1 0 0,0,0 92.0636363636364 12.5918799427113 2.629 133.420909090909 24.0686219565353 4.48 132.554545454545 35.9347406438757 5.615 0 0 chimp,elephant,human,macaque,marmoset,orangutan, lincRNA lincRNA A549@0,AG04450@0.012834,BJ@0,GM12878@0.0220295,H1HESC@0.0402395,HELAS3@0.037924,HEPG2@0.0102585,HMEC@0,HSMM@0.007462,HUVEC@0.0217685,K562@0,MCF7@0.0073735,NHEK@0,NHLF@0.008786,SKNSHRA@0.008242, 0 0 0 0 ENSG00000254887.1 ENST00000527895.1 chr19:42636707-42641251 3 756 3784 intergenic 5.10 1 1,1,1 1 0,0,0 0 54.4112050739958 132.086 3.23809523809524 78.3498942917548 106.352 3.26190476190476 79.8528012684989 102.931 0 0 chimp,dog,elephant,horse,human,macaque,marmoset,orangutan,panda, antisense antisense A549@0,AG04450@0.0831525,BJ@0.068925,GM12878@0.577561,H1HESC@0.040091,HELAS3@0,HEPG2@0,HMEC@0.032369,HSMM@0.0120135,HUVEC@0.0370575,K562@0,MCF7@0,NHEK@0.176139,NHLF@0.012768,SKNSHRA@0, 0 0 0 0 ENSG00000254887.1 ENST00000531517.1 chr19:42638656-42641239 2 552 2029 intergenic 5.10 1 0,0,1 0 0,0,0 0 91.1739773287334 0 0 114.437161163135 4.64 0 117.987185805816 4.734 0 0 chimp,elephant,horse,human,macaque,marmoset,orangutan,panda, antisense antisense A549@0,AG04450@0.0831525,BJ@0.068925,GM12878@0.577561,H1HESC@0.040091,HELAS3@0,HEPG2@0,HMEC@0.032369,HSMM@0.0120135,HUVEC@0.0370575,K562@0,MCF7@0,NHEK@0.176139,NHLF@0.012768,SKNSHRA@0, 0 0 0 0 ENSG00000225877.1 ENST00000425668.1 chr19:43326015-43331030 4 1869 3140 intergenic 6.11 0 0,0,0 0 0,0,0 0 0 0 0 0 0 0 0 0 0 0 chimp,human,macaque,orangutan, lincRNA lincRNA A549@0.016573,AG04450@0.0898395,BJ@0.240614,GM12878@0.011342,H1HESC@0,HELAS3@0.013831,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0.035769,NHEK@0.004398,NHLF@0.009318,SKNSHRA@0.015449, 0 0 0 0 ENSG00000227606.1 ENST00000419624.1 chr19:43657431-43665014 3 497 7082 intergenic -4.39 0 0,1,1 0 0,0,0 0 0 0 0 0 0 0 1.02937023439706 0 0 0 chimp,dog,human,macaque,marmoset,orangutan, antisense antisense A549@0,AG04450@0.047997,BJ@0.140923,GM12878@0,H1HESC@0,HELAS3@0.019372,HEPG2@0.0049775,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0.196808,NHLF@0,SKNSHRA@0.0098165, 0 0 0 0 ENSG00000227606.1 ENST00000425982.1 chr19:43657665-43659311 2 546 1098 intergenic -0.78 0 0,0,0 0 0,0,0 0 0 0 0 0 0 0 6.63934426229508 0 0 0 chimp,human,macaque,marmoset,orangutan, antisense antisense A549@0,AG04450@0.047997,BJ@0.140923,GM12878@0,H1HESC@0,HELAS3@0.019372,HEPG2@0.0049775,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0.196808,NHLF@0,SKNSHRA@0.0098165, 0 0 0 0 ENSG00000234465.3 ENST00000413422.2 chr19:44084790-44088106 3 2574 738 intergenic 10.23 0 0,1,0 1 0,1,1 16.6192696192696 0 0 27.7381507381507 1.34552845528455 0 31.6087801087801 2.40243902439024 0 0 1 chimp,human,macaque,orangutan, lincRNA lincRNA A549@0.0105245,AG04450@0.203993,BJ@0.157618,GM12878@0.0949985,H1HESC@1.32987,HELAS3@0.0853875,HEPG2@0.0317115,HMEC@0.10169,HSMM@0.046412,HUVEC@0.286312,K562@0.100782,MCF7@0.196693,NHEK@0.841905,NHLF@0.41386,SKNSHRA@0.457731, 0 0 0 0 ENSG00000247547.1 ENST00000499389.1 chr19:44326226-44331358 2 2047 3083 intergenic 0.90 0 0,0,0 0 0,0,0 0 0 0 6.82657547630679 0 9.562 0.906204201270151 0 9.591 1 1 chimp,human,macaque,marmoset,orangutan, lincRNA lincRNA A549@0.013692,AG04450@0,BJ@0.002362,GM12878@0.0085115,H1HESC@0.0112955,HELAS3@0.072066,HEPG2@0.0039,HMEC@0.007993,HSMM@0.008142,HUVEC@0,K562@0.007192,MCF7@0.004014,NHEK@0.00191167,NHLF@0.003767,SKNSHRA@0.0022145, 0 0 0 0 ENSG00000247377.1 ENST00000498944.1 chr19:44395957-44405957 3 2189 7807 intergenic -0.45 0 1,1,1 1 0,0,0 0 3.29191750992699 0 47.9392416628598 16.6494171897016 8.475 52.88213796254 19.5803765851159 8.575 0 0 cat,chimp,dog,horse,human,orangutan,panda, lincRNA lincRNA A549@0.350156,AG04450@0.871541,BJ@0.797042,GM12878@0.706953,H1HESC@0.494538,HELAS3@0.120281,HEPG2@0.309412,HMEC@0.274594,HSMM@0.585065,HUVEC@0.577114,K562@0.341966,MCF7@0.206486,NHEK@0.580624,NHLF@0.648162,SKNSHRA@1.84708, 0 0 0 0 ENSG00000176395.8 ENST00000454753.1 chr19:45005729-45033811 12 2108 25952 intergenic 71.58 0 0,1,0 0 0,1,1 0 0.398813193588163 0 49.219165085389 1.4713316892725 2.976 67.8249525616698 4.58192046855734 3.108 0 0 cat,cow,dog,human,macaque,panda,rat, lincRNA lincRNA A549@0.015797,AG04450@0.0041895,BJ@0,GM12878@0,H1HESC@0,HELAS3@0.021775,HEPG2@0.029331,HMEC@0,HSMM@0.0025025,HUVEC@0.0397755,K562@0.001553,MCF7@0.0084165,NHEK@0,NHLF@0,SKNSHRA@0.0015205, 0 0 0 0 ENSG00000176395.8 ENST00000412211.1 chr19:45010211-45033548 12 1761 21554 intergenic 73.75 0 0,1,1 0 0,1,1 0 0.480189292010764 0 58.2646223736513 1.53052797624571 2.976 80.4997160704145 4.75735362345736 3.108 0 0 cat,cow,dog,guinea_pig,human,macaque,mouse,panda,rat, lincRNA lincRNA A549@0.015797,AG04450@0.0041895,BJ@0,GM12878@0,H1HESC@0,HELAS3@0.021775,HEPG2@0.029331,HMEC@0,HSMM@0.0025025,HUVEC@0.0397755,K562@0.001553,MCF7@0.0084165,NHEK@0,NHLF@0,SKNSHRA@0.0015205, 0 0 0 0 ENSG00000176395.8 ENST00000414638.1 chr19:45010211-45033548 11 1763 21554 intergenic 71.58 0 0,1,1 0 0,1,1 0 0.480189292010764 0 58.1985252410664 1.53052797624571 2.976 80.4083947816223 4.75735362345736 3.108 0 0 cat,cow,dog,guinea_pig,human,macaque,mouse,panda,rat, lincRNA lincRNA A549@0.015797,AG04450@0.0041895,BJ@0,GM12878@0,H1HESC@0,HELAS3@0.021775,HEPG2@0.029331,HMEC@0,HSMM@0.0025025,HUVEC@0.0397755,K562@0.001553,MCF7@0.0084165,NHEK@0,NHLF@0,SKNSHRA@0.0015205, 0 0 0 0 ENSG00000176395.8 ENST00000421432.1 chr19:45010211-45033548 10 1485 21834 intergenic 55.71 0 0,1,1 0 0,1,1 0 0.474031327287716 0 12.9286195286195 1.61193551341944 2.976 31.1582491582492 4.85930200604562 3.108 0 0 cat,cow,dog,human,macaque,marmoset,panda,rat, lincRNA lincRNA A549@0.015797,AG04450@0.0041895,BJ@0,GM12878@0,H1HESC@0,HELAS3@0.021775,HEPG2@0.029331,HMEC@0,HSMM@0.0025025,HUVEC@0.0397755,K562@0.001553,MCF7@0.0084165,NHEK@0,NHLF@0,SKNSHRA@0.0015205, 0 0 0 0 ENSG00000176395.8 ENST00000424903.1 chr19:45010211-45033548 12 1518 21797 intergenic 62.75 0 0,1,1 0 0,1,1 0 0.474835986603661 0 13.4051383399209 1.55136027893747 2.976 31.2812911725955 4.80066064137267 3.108 0 0 cat,cow,dog,human,macaque,panda, lincRNA lincRNA A549@0.015797,AG04450@0.0041895,BJ@0,GM12878@0,H1HESC@0,HELAS3@0.021775,HEPG2@0.029331,HMEC@0,HSMM@0.0025025,HUVEC@0.0397755,K562@0.001553,MCF7@0.0084165,NHEK@0,NHLF@0,SKNSHRA@0.0015205, 0 0 0 0 ENSG00000176395.8 ENST00000431738.1 chr19:45010211-45033548 12 1798 21517 intergenic 71.58 0 0,1,1 0 0,1,1 0 0.481015011386346 0 57.7052280311457 1.46902449226193 2.976 79.5189098998888 4.69777385323233 3.108 0 0 cat,cow,dog,guinea_pig,human,macaque,mouse,panda,rat, lincRNA lincRNA A549@0.015797,AG04450@0.0041895,BJ@0,GM12878@0,H1HESC@0,HELAS3@0.021775,HEPG2@0.029331,HMEC@0,HSMM@0.0025025,HUVEC@0.0397755,K562@0.001553,MCF7@0.0084165,NHEK@0,NHLF@0,SKNSHRA@0.0015205, 0 0 0 0 ENSG00000176395.8 ENST00000445209.1 chr19:45010211-45033548 13 1796 21517 intergenic 78.62 0 0,1,1 0 0,1,1 0 0.481015011386346 0 57.7694877505568 1.46902449226193 2.976 79.6074610244989 4.69777385323233 3.108 0 0 cat,cow,dog,guinea_pig,human,macaque,mouse,panda,rat, lincRNA lincRNA A549@0.015797,AG04450@0.0041895,BJ@0,GM12878@0,H1HESC@0,HELAS3@0.021775,HEPG2@0.029331,HMEC@0,HSMM@0.0025025,HUVEC@0.0397755,K562@0.001553,MCF7@0.0084165,NHEK@0,NHLF@0,SKNSHRA@0.0015205, 0 0 0 0 ENSG00000176395.8 ENST00000448350.1 chr19:45010211-45033548 11 1520 21797 intergenic 55.71 0 0,1,1 0 0,1,1 0 0.474835986603661 0 13.3875 1.55136027893747 2.976 31.2401315789474 4.80066064137267 3.108 0 0 cat,cow,dog,human,macaque,marmoset,panda, lincRNA lincRNA A549@0.015797,AG04450@0.0041895,BJ@0,GM12878@0,H1HESC@0,HELAS3@0.021775,HEPG2@0.029331,HMEC@0,HSMM@0.0025025,HUVEC@0.0397755,K562@0.001553,MCF7@0.0084165,NHEK@0,NHLF@0,SKNSHRA@0.0015205, 0 0 0 0 ENSG00000176395.8 ENST00000316962.7 chr19:45015068-45033811 13 2021 16698 intergenic 5.79 0 0,1,0 0 0,1,1 0 0 0 51.5903018307768 0.703377650017966 2.976 71.0009896091044 4.76518145885735 3.108 0 0 cat,cow,dog,human,macaque,panda,rat, lincRNA lincRNA A549@0.015797,AG04450@0.0041895,BJ@0,GM12878@0,H1HESC@0,HELAS3@0.021775,HEPG2@0.029331,HMEC@0,HSMM@0.0025025,HUVEC@0.0397755,K562@0.001553,MCF7@0.0084165,NHEK@0,NHLF@0,SKNSHRA@0.0015205, 0 0 0 0 ENSG00000250044.1 ENST00000507442.1 chr19:45632292-45641075 3 4430 4349 intronic 5.33 0 0,1,0 0 0,0,0 0 4.28650264428604 42.64 0 0.744998850310416 46.079 9.30474040632054 28.8735341457806 53.014 0 1 chimp,human,macaque,orangutan, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0.10262,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0.0020065,HUVEC@0,K562@0.0012295,MCF7@0.0018345,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000248000.2 ENST00000501583.1 chr19:45976341-45978414 2 1979 92 exonic 3.63 0 0,1,0 0 0,0,0 45.2986356745831 88.3260869565217 3.96 79.0687215765538 130.826086956522 6.111 62.7635169277413 214.510869565217 6.219 0 0 chimp,cow,dog,elephant,horse,human,macaque,marmoset,mouse,orangutan,pig,rat, lincRNA lincRNA A549@0.004533,AG04450@0.001011,BJ@0.001269,GM12878@0.001429,H1HESC@0.003784,HELAS3@0.0068905,HEPG2@0,HMEC@0,HSMM@0.001264,HUVEC@0.0037555,K562@0.0017505,MCF7@0,NHEK@0.000640333,NHLF@0.0010665,SKNSHRA@0.0012145, 0 0 0 0 ENSG00000203347.2 ENST00000366172.2 chr19:46561088-46580887 3 2805 16990 intergenic 1.07 0 1,1,1 1 0,0,0 0 0 0 0 0.481695114773396 0 0 0.50306062389641 0 0 0 human, lincRNA lincRNA A549@0.536784,AG04450@0.000798,BJ@0,GM12878@0,H1HESC@0.116702,HELAS3@0.080941,HEPG2@0.333205,HMEC@0.005833,HSMM@0,HUVEC@0,K562@0.005057,MCF7@0.0152305,NHEK@0.00647133,NHLF@0,SKNSHRA@0.0052155, 0 0 0 0 ENSG00000256017.1 ENST00000379355.3 chr19:46692287-46706319 3 1640 12388 intergenic 5.20 0 1,1,1 0 0,0,0 0 0 0 0 0.721827575072651 0 0 24.6236680658702 0 0 1 human,macaque, lincRNA lincRNA A549@1.61258,AG04450@0.0064705,BJ@0,GM12878@0,H1HESC@0.0084385,HELAS3@2.19658,HEPG2@0.888447,HMEC@2.28378,HSMM@0,HUVEC@0.070796,K562@5.58028,MCF7@0.574476,NHEK@0.504072,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000236057.3 ENST00000446137.3 chr19:46706683-46715832 6 1310 7829 intergenic -3.34 0 0,1,0 0 0,0,0 0 0 0 0 0 0 0 0 0 1 1 chimp,human,macaque,marmoset,orangutan, lincRNA lincRNA A549@0.0667875,AG04450@0.0109915,BJ@0,GM12878@0.0012475,H1HESC@0.013311,HELAS3@0.287718,HEPG2@0.10811,HMEC@0.154355,HSMM@0.0058765,HUVEC@0.007153,K562@0.062827,MCF7@0.0694355,NHEK@0.426888,NHLF@0,SKNSHRA@0.004212, 0 0 0 0 ENSG00000236057.3 ENST00000537266.1 chr19:46714857-46718095 5 1611 1619 intergenic 3.92 0 0,0,1 0 0,0,0 0 0 0 0 0 0 0 0 0 0 1 human,macaque,marmoset, lincRNA lincRNA A549@0.0667875,AG04450@0.0109915,BJ@0,GM12878@0.0012475,H1HESC@0.013311,HELAS3@0.287718,HEPG2@0.10811,HMEC@0.154355,HSMM@0.0058765,HUVEC@0.007153,K562@0.062827,MCF7@0.0694355,NHEK@0.426888,NHLF@0,SKNSHRA@0.004212, 0 0 0 0 ENSG00000245598.2 ENST00000525008.1 chr19:47163621-47180704 3 493 16586 intronic 1.17 0 0,0,1 0 0,0,0 32.4868154158215 31.9436271554323 161.215 12.5659229208925 34.6858193657301 122.513 12.5354969574037 38.9946943205113 123.571 0 0 chimp,horse,human,macaque,orangutan, lincRNA processed_transcript A549@0.0095875,AG04450@0.025834,BJ@0.022314,GM12878@0.0468235,H1HESC@0.0158585,HELAS3@0.081646,HEPG2@0.0440345,HMEC@0,HSMM@0.0110455,HUVEC@0.008242,K562@0.0170865,MCF7@0.006272,NHEK@0.010647,NHLF@0.0147675,SKNSHRA@0.24096, 0 0 0 0 ENSG00000245598.2 ENST00000500689.1 chr19:47164735-47174598 3 1301 8558 intergenic -1.74 0 0,0,0 0 0,0,0 39.8431975403536 0 375.669 62.8601076095311 0 360.201 66.5157571099154 0.192217807899042 383.674 0 0 cat,chimp,dog,elephant,guinea_pig,horse,human,macaque,marmoset,orangutan,panda, lincRNA processed_transcript A549@0.0095875,AG04450@0.025834,BJ@0.022314,GM12878@0.0468235,H1HESC@0.0158585,HELAS3@0.081646,HEPG2@0.0440345,HMEC@0,HSMM@0.0110455,HUVEC@0.008242,K562@0.0170865,MCF7@0.006272,NHEK@0.010647,NHLF@0.0147675,SKNSHRA@0.24096, 0 0 0 0 ENSG00000245598.2 ENST00000525352.1 chr19:47165242-47176893 2 379 11270 intergenic -6.61 0 0,0,0 0 0,0,0 12.4327176781003 0 217.879 78.0369393139842 0.481987577639752 263.73 88.2638522427441 0.637089618456078 270.39 0 0 cat,chimp,cow,dog,elephant,guinea_pig,human,macaque,marmoset,orangutan,panda, lincRNA processed_transcript A549@0.0095875,AG04450@0.025834,BJ@0.022314,GM12878@0.0468235,H1HESC@0.0158585,HELAS3@0.081646,HEPG2@0.0440345,HMEC@0,HSMM@0.0110455,HUVEC@0.008242,K562@0.0170865,MCF7@0.006272,NHEK@0.010647,NHLF@0.0147675,SKNSHRA@0.24096, 0 0 0 0 ENSG00000245602.1 ENST00000500835.1 chr19:47987539-47999639 3 1750 10346 exonic 2.65 0 1,1,1 1 0,0,0 45.752 12.0911463367485 141.489 28.5394285714286 26.6926348347187 242.862 29.752 28.8104581480766 244.74 1 1 chimp,human,macaque,marmoset,orangutan, lincRNA lincRNA A549@0.776441,AG04450@0.500483,BJ@0.483478,GM12878@1.31726,H1HESC@0.486367,HELAS3@0.806347,HEPG2@0.74254,HMEC@0.836999,HSMM@0.398999,HUVEC@0.440815,K562@0.466083,MCF7@0.577164,NHEK@0.340684,NHLF@0.517717,SKNSHRA@1.26112, 0 0 0 0 ENSG00000247217.1 ENST00000499475.1 chr19:48758932-48761452 2 1963 555 exonic -4.22 0 1,1,1 1 0,0,0 0 0 0 0 0 0 0 0 0 0 1 chimp,human,macaque,orangutan, lincRNA lincRNA A549@0.145598,AG04450@0.128488,BJ@0.202846,GM12878@2.40668,H1HESC@0.101145,HELAS3@2.20479,HEPG2@0.465734,HMEC@0.302148,HSMM@0.31592,HUVEC@2.53486,K562@2.89976,MCF7@0.407224,NHEK@0.344033,NHLF@0.121452,SKNSHRA@0.177931, 0 0 0 0 ENSG00000235191.1 ENST00000416432.1 chr19:49414187-49422148 2 431 7528 exonic -0.73 1 0,1,0 0 0,0,0 82.3201856148492 19.4869819341126 61.575 120.900232018561 26.3119022316684 105.502 139.113689095128 32.9588204038257 113.389 0 0 chimp,cow,dog,elephant,horse,human,orangutan,panda,pig,rabbit, antisense antisense A549@0.005013,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0.0262445, 0 0 0 0 ENSG00000204666.3 ENST00000527209.1 chr19:50553846-50570050 3 1522 14678 encompassing 9.31 0 1,1,1 0 0,1,0 0 4.62930917018667 0 6.37647831800263 5.11050551846301 0 24.9796320630749 19.9180406049871 57.106 0 1 human,macaque,orangutan, lincRNA processed_transcript A549@0.071496,AG04450@0.0927935,BJ@0.0789245,GM12878@0.059293,H1HESC@0.096335,HELAS3@0.0694285,HEPG2@0.173507,HMEC@0.380248,HSMM@0.0296045,HUVEC@0.033997,K562@0.0441805,MCF7@0.249536,NHEK@0.08965,NHLF@0.00762,SKNSHRA@0.25698, 0 0 0 0 ENSG00000131401.6 ENST00000531692.1 chr19:50837053-50837818 2 559 204 intronic -16.47 0 1,1,1 0 0,1,0 0 0 25.415 88.2593917710197 9.5 80.693 143.665474060823 7.04901960784314 98.211 0 0 cat,chimp,cow,dog,guinea_pig,horse,human,macaque,marmoset,orangutan,panda,pig,rabbit, lincRNA lincRNA A549@0.0324445,AG04450@0,BJ@0,GM12878@48.1082,H1HESC@0.004411,HELAS3@0,HEPG2@0.009821,HMEC@0,HSMM@0.003362,HUVEC@0,K562@0.0209905,MCF7@0.0088085,NHEK@0.0324697,NHLF@0.0028735,SKNSHRA@0.0019645, 0 0 0 0 ENSG00000131401.6 ENST00000527780.1 chr19:50837057-50848018 9 1334 9611 intronic -4.58 1 1,1,1 1 0,1,0 81.9895052473763 0.77931536780772 0 197.622188905547 5.47299968785766 7.955 260.622188905547 22.233898657788 8.285 0 0 chimp,cow,dog,elephant,guinea_pig,horse,human,macaque,marmoset,mouse,orangutan,panda,pig,rat, lincRNA lincRNA A549@0.0324445,AG04450@0,BJ@0,GM12878@48.1082,H1HESC@0.004411,HELAS3@0,HEPG2@0.009821,HMEC@0,HSMM@0.003362,HUVEC@0,K562@0.0209905,MCF7@0.0088085,NHEK@0.0324697,NHLF@0.0028735,SKNSHRA@0.0019645, 0 0 0 0 ENSG00000131401.6 ENST00000534096.1 chr19:50837878-50848023 7 1148 8985 intronic 57.04 0 0,1,1 1 0,1,0 95.2735191637631 0.833611574846967 0 188.330139372822 5.45242070116861 7.955 235.379790940767 23.3711741791875 8.285 0 0 chimp,cow,dog,elephant,guinea_pig,horse,human,macaque,marmoset,mouse,opossum,orangutan,panda,pig,rabbit,rat, lincRNA lincRNA A549@0.0324445,AG04450@0,BJ@0,GM12878@48.1082,H1HESC@0.004411,HELAS3@0,HEPG2@0.009821,HMEC@0,HSMM@0.003362,HUVEC@0,K562@0.0209905,MCF7@0.0088085,NHEK@0.0324697,NHLF@0.0028735,SKNSHRA@0.0019645, 0 0 0 0 ENSG00000131401.6 ENST00000534789.1 chr19:50837891-50848020 4 693 9430 intronic 14.16 0 0,1,1 1 0,1,0 43.2727272727273 9.28875927889714 0 145.142857142857 17.6397667020148 7.955 178.239538239538 38.0904559915164 8.285 0 0 cat,chimp,cow,dog,elephant,guinea_pig,horse,human,macaque,marmoset,opossum,orangutan,panda,pig,rat, lincRNA lincRNA A549@0.0324445,AG04450@0,BJ@0,GM12878@48.1082,H1HESC@0.004411,HELAS3@0,HEPG2@0.009821,HMEC@0,HSMM@0.003362,HUVEC@0,K562@0.0209905,MCF7@0.0088085,NHEK@0.0324697,NHLF@0.0028735,SKNSHRA@0.0019645, 0 0 0 0 ENSG00000131401.6 ENST00000525179.1 chr19:50840265-50848024 3 675 7080 intronic -1.84 0 0,1,0 1 0,1,0 94.7614814814815 0 0 156.845925925926 5.0138418079096 7.955 199.394074074074 26.7988700564972 8.285 0 0 cat,chimp,cow,dog,elephant,horse,human,macaque,marmoset,opossum,orangutan,panda,pig, lincRNA lincRNA A549@0.0324445,AG04450@0,BJ@0,GM12878@48.1082,H1HESC@0.004411,HELAS3@0,HEPG2@0.009821,HMEC@0,HSMM@0.003362,HUVEC@0,K562@0.0209905,MCF7@0.0088085,NHEK@0.0324697,NHLF@0.0028735,SKNSHRA@0.0019645, 0 0 0 0 ENSG00000254760.1 ENST00000532473.1 chr19:51917552-51918219 2 490 175 exonic 5.58 0 0,0,1 0 0,0,0 0 0 0 63.8530612244898 0 14.087 64.4551020408163 0 11.445 0 0 cat,chimp,cow,dog,elephant,guinea_pig,horse,human,macaque,marmoset,orangutan,panda,pig,platypus,rabbit, antisense antisense A549@0.114599,AG04450@0,BJ@0,GM12878@0.475907,H1HESC@1.3794,HELAS3@0.124703,HEPG2@0.291626,HMEC@0,HSMM@0.232287,HUVEC@0,K562@0.730507,MCF7@0.144098,NHEK@0.0158387,NHLF@0.003966,SKNSHRA@0.0672565, 0 0 0 0 ENSG00000255441.1 ENST00000526996.1 chr19:51918978-51919900 2 625 295 exonic 6.20 0 0,0,0 0 0,0,0 21.712 18.7118644067797 7.409 27.2592 23.5864406779661 73.33 27.8736 26.7864406779661 75.185 0 0 cat,chimp,cow,dog,elephant,guinea_pig,horse,human,macaque,marmoset,mouse,opossum,orangutan,panda,pig,rabbit, antisense antisense A549@0.054472,AG04450@0,BJ@0.0104185,GM12878@0.218658,H1HESC@1.72809,HELAS3@0.0527305,HEPG2@0.16065,HMEC@0,HSMM@0.0185835,HUVEC@0,K562@0.540382,MCF7@0.0588305,NHEK@0.005883,NHLF@0.011405,SKNSHRA@0.013525, 0 0 0 0 ENSG00000255441.1 ENST00000532688.1 chr19:51919160-51920679 3 726 789 exonic 16.18 0 0,1,1 0 0,0,0 18.6914600550964 6.99619771863118 7.409 43.0468319559229 18.171102661597 65.724 49.1694214876033 30.871989860583 67.676 0 0 cat,chimp,cow,dog,elephant,guinea_pig,horse,human,macaque,marmoset,opossum,orangutan,panda,pig,rabbit,rat, antisense antisense A549@0.054472,AG04450@0,BJ@0.0104185,GM12878@0.218658,H1HESC@1.72809,HELAS3@0.0527305,HEPG2@0.16065,HMEC@0,HSMM@0.0185835,HUVEC@0,K562@0.540382,MCF7@0.0588305,NHEK@0.005883,NHLF@0.011405,SKNSHRA@0.013525, 0 0 0 0 ENSG00000251384.1 ENST00000503177.1 chr19:52188616-52196709 2 3960 4131 intergenic 4.46 0 0,1,0 0 0,0,0 22.1126262626263 129.712902444929 0 48.7462121212121 125.861292665214 19.282 45.1628787878788 136.61510530138 25.222 0 1 chimp,human,orangutan, lincRNA lincRNA A549@0.156166,AG04450@0.030879,BJ@0.0338975,GM12878@0,H1HESC@0.0349015,HELAS3@0.118031,HEPG2@0.067755,HMEC@0.007234,HSMM@0.014105,HUVEC@0.0209455,K562@0.084201,MCF7@0.174765,NHEK@0.0484987,NHLF@0.008777,SKNSHRA@0.176809, 0 0 0 0 ENSG00000246125.2 ENST00000500242.1 chr19:52452415-52484613 3 688 31506 intronic 4.43 0 1,1,1 1 0,0,0 0 4.23605027613788 0 0 4.36821557798515 0 0 37.8965593855139 0 0 0 human, lincRNA lincRNA A549@0,AG04450@0.276888,BJ@0.037687,GM12878@0,H1HESC@0.051611,HELAS3@0.00654,HEPG2@0.043428,HMEC@0,HSMM@0,HUVEC@0.0086135,K562@0.0039445,MCF7@0.0029755,NHEK@0.005601,NHLF@0.255421,SKNSHRA@0.227756, 0 0 0 0 ENSG00000246015.1 ENST00000500322.1 chr19:52892095-52900985 4 6184 2700 intergenic 6.21 0 1,1,1 1 0,0,0 0 0 0 0 0 0 15.0845730918499 0 0 0 1 chimp,human,orangutan, lincRNA lincRNA A549@0.0088105,AG04450@0.338973,BJ@0.405072,GM12878@0.0197205,H1HESC@0.60129,HELAS3@0.0188875,HEPG2@0.353606,HMEC@0.002647,HSMM@0.405985,HUVEC@0.354284,K562@0.0294445,MCF7@0.0864685,NHEK@0.301339,NHLF@0.157492,SKNSHRA@0.677864, 0 0 0 0 ENSG00000246015.1 ENST00000501032.1 chr19:52892095-52901010 5 2235 6672 intergenic 2.31 0 1,1,1 1 0,0,0 0 0 0 0 0 0 0 13.9812649880096 0 0 1 chimp,human,marmoset, lincRNA lincRNA A549@0.0088105,AG04450@0.338973,BJ@0.405072,GM12878@0.0197205,H1HESC@0.60129,HELAS3@0.0188875,HEPG2@0.353606,HMEC@0.002647,HSMM@0.405985,HUVEC@0.354284,K562@0.0294445,MCF7@0.0864685,NHEK@0.301339,NHLF@0.157492,SKNSHRA@0.677864, 0 0 0 0 ENSG00000160336.10 ENST00000454407.1 chr19:53935227-53961514 5 4201 22078 intergenic 6.88 1 1,1,1 1 0,1,1 0 0.479210073376212 0 9.63627707688646 4.57817737113869 0 113.388716972149 26.8587281456654 0 0 0 cat,chimp,cow,dog,elephant,guinea_pig,horse,human,macaque,marmoset,mouse,opossum,orangutan,panda,pig,rabbit,rat, processed_transcript processed_transcript A549@6.39886,AG04450@3.88818,BJ@2.17274,GM12878@8.24907,H1HESC@7.42523,HELAS3@4.51403,HEPG2@3.44782,HMEC@2.91643,HSMM@2.8477,HUVEC@2.43535,K562@10.5994,MCF7@7.03512,NHEK@4.09616,NHLF@2.94398,SKNSHRA@3.74867, 0 0 0 0 ENSG00000160336.10 ENST00000447129.1 chr19:53935246-53953585 6 933 17396 intergenic 0.57 1 1,1,1 1 0,1,1 0 0.608185789836744 0 44.8724544480172 5.73080018395033 0 35.4072883172562 30.4752241894688 0 0 0 chimp,dog,guinea_pig,human,macaque,marmoset,mouse,orangutan,rat, processed_transcript processed_transcript A549@6.39886,AG04450@3.88818,BJ@2.17274,GM12878@8.24907,H1HESC@7.42523,HELAS3@4.51403,HEPG2@3.44782,HMEC@2.91643,HSMM@2.8477,HUVEC@2.43535,K562@10.5994,MCF7@7.03512,NHEK@4.09616,NHLF@2.94398,SKNSHRA@3.74867, 2 44 0 0 ENSG00000160336.10 ENST00000429310.1 chr19:53948254-53961515 5 4057 9196 intergenic 6.88 1 0,0,1 0 0,1,1 0 0 0 10.3194478678827 0.150500217485863 0 117.876016761154 14.1473466724663 0 0 0 cat,chimp,cow,dog,elephant,guinea_pig,horse,human,macaque,marmoset,mouse,opossum,orangutan,panda,pig,rabbit,rat, processed_transcript processed_transcript A549@6.39886,AG04450@3.88818,BJ@2.17274,GM12878@8.24907,H1HESC@7.42523,HELAS3@4.51403,HEPG2@3.44782,HMEC@2.91643,HSMM@2.8477,HUVEC@2.43535,K562@10.5994,MCF7@7.03512,NHEK@4.09616,NHLF@2.94398,SKNSHRA@3.74867, 0 0 0 0 ENSG00000160336.10 ENST00000366293.2 chr19:53950490-53953608 3 644 2470 intergenic -1.83 1 0,0,1 0 0,1,1 0 0 0 65.0093167701863 0.560323886639676 0 51.2965838509317 23.9331983805668 0 0 0 chimp,guinea_pig,horse,human,macaque,marmoset,mouse,orangutan,pig,rat, processed_transcript processed_transcript A549@6.39886,AG04450@3.88818,BJ@2.17274,GM12878@8.24907,H1HESC@7.42523,HELAS3@4.51403,HEPG2@3.44782,HMEC@2.91643,HSMM@2.8477,HUVEC@2.43535,K562@10.5994,MCF7@7.03512,NHEK@4.09616,NHLF@2.94398,SKNSHRA@3.74867, 0 0 0 0 ENSG00000160336.10 ENST00000396407.1 chr19:53952637-53953585 3 590 354 intergenic 0.57 1 0,0,1 0 0,1,1 0 0 0 70.9593220338983 3.90960451977401 0 55.9915254237288 61.4435028248588 0 0 0 chimp,elephant,guinea_pig,human,macaque,marmoset,orangutan,panda,pig,rat, processed_transcript processed_transcript A549@6.39886,AG04450@3.88818,BJ@2.17274,GM12878@8.24907,H1HESC@7.42523,HELAS3@4.51403,HEPG2@3.44782,HMEC@2.91643,HSMM@2.8477,HUVEC@2.43535,K562@10.5994,MCF7@7.03512,NHEK@4.09616,NHLF@2.94398,SKNSHRA@3.74867, 0 0 0 0 ENSG00000160336.10 ENST00000432094.2 chr19:53952750-53960002 3 2154 5094 intergenic 6.88 0 0,0,0 0 0,1,1 0 0 0 18.7938718662953 0.543384373773066 0 119.701949860724 18.5518256772674 0 0 0 cat,chimp,cow,dog,elephant,guinea_pig,horse,human,macaque,marmoset,mouse,opossum,orangutan,panda,pig,platypus,rabbit,rat, processed_transcript processed_transcript A549@6.39886,AG04450@3.88818,BJ@2.17274,GM12878@8.24907,H1HESC@7.42523,HELAS3@4.51403,HEPG2@3.44782,HMEC@2.91643,HSMM@2.8477,HUVEC@2.43535,K562@10.5994,MCF7@7.03512,NHEK@4.09616,NHLF@2.94398,SKNSHRA@3.74867, 0 0 0 0 ENSG00000160336.10 ENST00000334095.4 chr19:53953150-53961514 2 3679 4683 intergenic 6.88 1 0,0,1 0 0,1,1 0 0 0 0 0 43.596 120.877140527317 13.1206491565236 55.135 0 0 cat,chimp,cow,dog,elephant,guinea_pig,horse,human,macaque,marmoset,mouse,opossum,orangutan,panda,pig,rabbit,rat, processed_transcript processed_transcript A549@6.39886,AG04450@3.88818,BJ@2.17274,GM12878@8.24907,H1HESC@7.42523,HELAS3@4.51403,HEPG2@3.44782,HMEC@2.91643,HSMM@2.8477,HUVEC@2.43535,K562@10.5994,MCF7@7.03512,NHEK@4.09616,NHLF@2.94398,SKNSHRA@3.74867, 0 0 0 0 ENSG00000228323.1 ENST00000455835.1 chr19:54357835-54372361 4 435 14085 intronic 0 0 0,1,0 0 0,0,0 0 8.93347532836351 0 0 9.51309904153355 7.226 7.74022988505747 11.8305289314874 14.312 0 0 chimp,human,macaque,marmoset,orangutan, antisense antisense A549@0.0465035,AG04450@0.0338845,BJ@0.072792,GM12878@0,H1HESC@0.081039,HELAS3@0.079434,HEPG2@0.0491415,HMEC@0,HSMM@0.028122,HUVEC@0.0540225,K562@0.028984,MCF7@0.0718735,NHEK@0,NHLF@0.022223,SKNSHRA@0.163216, 0 0 0 0 ENSG00000232324.1 ENST00000422045.1 chr19:54368017-54369394 3 552 821 intergenic 3.91 0 0,1,1 0 0,0,0 17.1376811594203 0 18.63 0 0 14.97 6.36594202898551 13.0231425091352 18.7 0 0 chimp,human,macaque,marmoset,orangutan, lincRNA lincRNA A549@5.48067,AG04450@0.00581,BJ@0.014627,GM12878@0,H1HESC@0,HELAS3@2.70053,HEPG2@4.02772,HMEC@0.285312,HSMM@0,HUVEC@0,K562@0,MCF7@0.145408,NHEK@0,NHLF@0,SKNSHRA@0.012271, 0 0 0 0 ENSG00000232220.1 ENST00000413496.1 chr19:54377880-54379303 2 421 1000 exonic -4.04 0 0,1,1 0 0,0,0 0 41.984 0 0 50.911 20.154 0 50.622 27.714 0 0 chimp,human,macaque,marmoset,orangutan,pig, antisense antisense A549@0.0130595,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0.0217715,NHEK@0,NHLF@0,SKNSHRA@0.010746, 0 0 0 0 ENSG00000231374.1 ENST00000421718.1 chr19:54617086-54617594 2 370 136 intronic -8.67 0 0,0,0 0 0,0,0 0 0 118.556 0 0 134.504 0 0 129.641 0 0 chimp,human,macaque,orangutan, antisense antisense A549@0.100579,AG04450@0,BJ@0.0191205,GM12878@0.033035,H1HESC@0.0325745,HELAS3@0.019161,HEPG2@0.114526,HMEC@0,HSMM@0,HUVEC@0.0264185,K562@0.0049535,MCF7@0.010989,NHEK@0.00285667,NHLF@1.11004,SKNSHRA@0.110829, 0 0 0 0 ENSG00000237017.1 ENST00000452097.1 chr19:54622891-54628722 4 4154 1671 exonic 6.06 0 0,1,1 0 0,0,0 41.9027443428021 0.335128665469779 0 67.4508907077516 7.14781567923399 0 74.3177660086663 8.67504488330341 0 0 0 chimp,human,macaque, antisense antisense A549@0.035965,AG04450@0.0110545,BJ@0.0100255,GM12878@0.03122,H1HESC@0.058114,HELAS3@0.015737,HEPG2@0.069657,HMEC@0.17589,HSMM@0.019531,HUVEC@0.0616755,K562@0.009646,MCF7@0.088616,NHEK@0.0858903,NHLF@0.004682,SKNSHRA@0.115152, 0 0 0 0 ENSG00000223660.1 ENST00000426213.1 chr19:54703321-54703838 2 408 107 intergenic 1.16 1 0,0,0 0 0,0,0 0 0 0 0 0 6.483 0 0 9.393 0 0 chimp,human,macaque,orangutan, antisense antisense A549@0.008226,AG04450@0.06332,BJ@0.015786,GM12878@0.227311,H1HESC@0.279031,HELAS3@0.122989,HEPG2@0.176939,HMEC@0,HSMM@0.020074,HUVEC@0.013026,K562@0.0389025,MCF7@0.0394515,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000227407.1 ENST00000457113.1 chr19:54941832-54945878 2 527 3517 exonic 0 0 0,0,1 0 0,0,0 107.878557874763 8.59510946829684 39.606 103.899430740038 13.1285186238271 65.251 117.605313092979 12.8046630651123 64.292 0 0 cat,chimp,cow,dog,elephant,horse,human,macaque,marmoset,mouse,orangutan,panda,pig,rabbit,rat, antisense antisense A549@0.085625,AG04450@0.045623,BJ@0.0045745,GM12878@0.0397525,H1HESC@0.0512065,HELAS3@0.086718,HEPG2@0.197255,HMEC@0.015481,HSMM@0.0753635,HUVEC@0.128721,K562@0.018064,MCF7@0.0773175,NHEK@0.017222,NHLF@0,SKNSHRA@0.082718, 0 0 0 0 ENSG00000226696.1 ENST00000429922.1 chr19:54955991-54960192 3 868 3329 exonic 0 0 0,1,0 1 0,0,0 0 0 0 0 1.86662661459898 28.396 0 17.7176329227996 30.633 0 0 chimp,human,macaque,marmoset,orangutan, antisense antisense A549@2.46554,AG04450@1.10185,BJ@1.22461,GM12878@2.11329,H1HESC@1.40117,HELAS3@2.51042,HEPG2@2.38365,HMEC@2.1085,HSMM@1.14257,HUVEC@1.16278,K562@3.9755,MCF7@1.97115,NHEK@0.814382,NHLF@1.03799,SKNSHRA@1.8093, 1 96 0 0 ENSG00000226696.1 ENST00000416022.1 chr19:54956214-54959780 2 580 2984 intergenic 0.44 0 0,1,1 0 0,0,0 0 0 0 0 2.08243967828418 28.396 0 19.7660857908847 30.633 0 0 chimp,horse,human,macaque,marmoset,orangutan, antisense antisense A549@2.46554,AG04450@1.10185,BJ@1.22461,GM12878@2.11329,H1HESC@1.40117,HELAS3@2.51042,HEPG2@2.38365,HMEC@2.1085,HSMM@1.14257,HUVEC@1.16278,K562@3.9755,MCF7@1.97115,NHEK@0.814382,NHLF@1.03799,SKNSHRA@1.8093, 0 0 0 0 ENSG00000226696.1 ENST00000448978.1 chr19:54959343-54960223 2 462 416 exonic 0 0 0,1,0 1 0,0,0 0 0 0 0 0 28.396 0 0 30.633 0 0 chimp,human,macaque,marmoset,orangutan, antisense antisense A549@2.46554,AG04450@1.10185,BJ@1.22461,GM12878@2.11329,H1HESC@1.40117,HELAS3@2.51042,HEPG2@2.38365,HMEC@2.1085,HSMM@1.14257,HUVEC@1.16278,K562@3.9755,MCF7@1.97115,NHEK@0.814382,NHLF@1.03799,SKNSHRA@1.8093, 0 0 0 0 ENSG00000170858.5 ENST00000413439.1 chr19:55219700-55224955 7 2120 3123 intergenic 45.60 1 0,0,1 0 0,0,0 0 0 0 5.03867924528302 0.471021453730387 0 13.4037735849057 0.843739993595901 0 0 0 chimp,cow,dog,elephant,guinea_pig,horse,human,macaque,marmoset,mouse,orangutan,panda,pig,rabbit,rat, processed_transcript processed_transcript A549@0,AG04450@0,BJ@0,GM12878@0.011707,H1HESC@0,HELAS3@0,HEPG2@0.002565,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0.000907,SKNSHRA@0, 0 0 0 0 ENSG00000249969.1 ENST00000511136.1 chr19:55728028-55732984 2 855 4099 intergenic -2.74 0 1,1,1 1 0,0,0 0 0 0 0 0 0 0 0 0 0 1 chimp,human,macaque,orangutan, lincRNA lincRNA A549@0.124456,AG04450@0,BJ@0,GM12878@0.0209385,H1HESC@0,HELAS3@0.120472,HEPG2@0.0753205,HMEC@0,HSMM@0.004802,HUVEC@0.006945,K562@0.225561,MCF7@0.231878,NHEK@0.00454633,NHLF@0,SKNSHRA@0.283308, 0 0 0 0 ENSG00000248386.1 ENST00000505773.1 chr19:56578050-56590164 4 1654 10454 intergenic 6.24 0 0,0,0 0 0,0,0 0 0 0 0 0 0 25.3204353083434 68.9994260570117 0 0 1 chimp,human,macaque,orangutan, lincRNA lincRNA A549@0.003332,AG04450@0,BJ@0.006474,GM12878@0.0488475,H1HESC@0,HELAS3@0.0128055,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0.0073305,NHEK@0,NHLF@0,SKNSHRA@0.008225, 0 0 0 0 ENSG00000245902.1 ENST00000501792.1 chr19:56905087-56910537 4 1270 4174 intergenic 1.85 0 1,1,1 1 0,0,0 0 0 0 0 0 9.615 0 0 13.055 1 1 chimp,human,macaque,marmoset,orangutan, lincRNA lincRNA A549@0.25156,AG04450@0.657231,BJ@0.914331,GM12878@0.035231,H1HESC@1.24236,HELAS3@0.0131055,HEPG2@0.0984075,HMEC@0.216123,HSMM@0.380116,HUVEC@0.206276,K562@0.35959,MCF7@0,NHEK@0.635366,NHLF@0.464935,SKNSHRA@0.881514, 0 0 0 0 ENSG00000245902.1 ENST00000502239.1 chr19:56905102-56910537 4 1602 3827 intergenic 1.85 0 1,1,1 1 0,0,0 0 0 0 0 0 9.615 0 0 13.055 0 1 chimp,human,macaque,orangutan, lincRNA lincRNA A549@0.25156,AG04450@0.657231,BJ@0.914331,GM12878@0.035231,H1HESC@1.24236,HELAS3@0.0131055,HEPG2@0.0984075,HMEC@0.216123,HSMM@0.380116,HUVEC@0.206276,K562@0.35959,MCF7@0,NHEK@0.635366,NHLF@0.464935,SKNSHRA@0.881514, 0 0 0 0 ENSG00000245902.1 ENST00000500950.1 chr19:56905116-56910541 2 1597 3826 intergenic -0.47 0 1,1,1 1 0,0,0 0 0 0 0 0 9.615 0 0 13.055 0 1 chimp,human,macaque,orangutan, lincRNA lincRNA A549@0.25156,AG04450@0.657231,BJ@0.914331,GM12878@0.035231,H1HESC@1.24236,HELAS3@0.0131055,HEPG2@0.0984075,HMEC@0.216123,HSMM@0.380116,HUVEC@0.206276,K562@0.35959,MCF7@0,NHEK@0.635366,NHLF@0.464935,SKNSHRA@0.881514, 0 0 0 0 ENSG00000245443.1 ENST00000499186.1 chr19:57056935-57078774 2 2037 19800 intronic 1.86 0 1,1,1 0 0,0,0 0 36.4944444444444 0 0 27.9531313131313 0 0 25.2527272727273 2.915 0 0 chimp,human,macaque,orangutan,rabbit, lincRNA lincRNA A549@0.129893,AG04450@0.24508,BJ@0.268622,GM12878@0.0064145,H1HESC@0.269041,HELAS3@0,HEPG2@0,HMEC@0.050204,HSMM@0.127573,HUVEC@0.145482,K562@0,MCF7@0,NHEK@0.107731,NHLF@0.192099,SKNSHRA@0.415009, 0 0 0 0 ENSG00000249567.1 ENST00000506016.1 chr19:57352270-57359922 2 1286 6364 intergenic 3.01 0 1,1,1 1 0,0,0 16.5917573872473 0.563324952859837 0 0.720839813374806 0.413104965430547 24.158 0.730171073094868 0.815681961030798 24.648 0 0 chimp,human,macaque,marmoset,orangutan,rabbit, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0.051852,HEPG2@2.19106,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0.105415, 0 0 0 0 ENSG00000246051.1 ENST00000499062.1 chr19:58768639-58790174 3 2267 19264 intronic 9.66 0 1,1,1 1 0,0,0 0 0.729080149501661 0 0 0.781146179401993 18.733 2.99691221879135 10.9600290697674 18.768 0 1 chimp,human, lincRNA lincRNA A549@0.961308,AG04450@1.14064,BJ@0.686393,GM12878@0.693136,H1HESC@1.38644,HELAS3@0.924658,HEPG2@1.49209,HMEC@0.552141,HSMM@0.729259,HUVEC@0.775856,K562@1.70259,MCF7@0.702499,NHEK@0.536849,NHLF@0.827188,SKNSHRA@1.76425, 0 0 0 0 ENSG00000142396.4 ENST00000413518.1 chr19:58816715-58827023 4 1429 8873 intergenic 14.82 1 1,1,1 1 0,0,0 0 0 0 0 0 0 0 0 0 0 0 chimp,human,macaque,orangutan, lincRNA lincRNA A549@27.1238,AG04450@9.29085,BJ@8.74536,GM12878@17.2794,H1HESC@8.08107,HELAS3@27.0699,HEPG2@7.88911,HMEC@11.4629,HSMM@11.9323,HUVEC@7.5932,K562@19.3207,MCF7@14.141,NHEK@11.7446,NHLF@9.40062,SKNSHRA@15.016, 0 0 0 0 ENSG00000142396.4 ENST00000427361.1 chr19:58816740-58826568 4 918 8904 intergenic 14.19 0 1,1,1 1 0,0,0 0 0 0 0 0 0 0 0 0 0 0 chimp,human,orangutan, lincRNA lincRNA A549@27.1238,AG04450@9.29085,BJ@8.74536,GM12878@17.2794,H1HESC@8.08107,HELAS3@27.0699,HEPG2@7.88911,HMEC@11.4629,HSMM@11.9323,HUVEC@7.5932,K562@19.3207,MCF7@14.141,NHEK@11.7446,NHLF@9.40062,SKNSHRA@15.016, 0 0 0 0 ENSG00000142396.4 ENST00000434052.1 chr19:58816743-58818000 2 614 641 intergenic -2.62 0 1,1,1 1 0,0,0 0 0 0 0 0 0 0 0 0 0 1 chimp,human,macaque,orangutan, lincRNA retained_intron A549@27.1238,AG04450@9.29085,BJ@8.74536,GM12878@17.2794,H1HESC@8.08107,HELAS3@27.0699,HEPG2@7.88911,HMEC@11.4629,HSMM@11.9323,HUVEC@7.5932,K562@19.3207,MCF7@14.141,NHEK@11.7446,NHLF@9.40062,SKNSHRA@15.016, 0 0 0 0 ENSG00000227061.1 ENST00000437798.1 chr2:197569-202605 2 4773 261 intergenic 9.11 1 0,0,0 0 0,0,0 0 0 0 2.25686151267547 0 0 77.6836371254976 0 0 0 0 chimp,human, antisense antisense A549@0,AG04450@0,BJ@0,GM12878@0.0016885,H1HESC@0,HELAS3@0,HEPG2@0.0040535,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000228643.1 ENST00000450709.1 chr2:286419-287496 2 692 383 exonic 2.12 0 0,0,1 0 0,0,0 31.0838150289017 0 34.54 21.2471098265896 0 57.851 38.4682080924856 0 67.843 1 1 chimp,human,macaque,marmoset,orangutan, antisense retained_intron A549@0.017891,AG04450@0.0085315,BJ@0.013989,GM12878@0.110792,H1HESC@0,HELAS3@0.171424,HEPG2@0.150836,HMEC@0,HSMM@0.035631,HUVEC@0.015047,K562@0.0411065,MCF7@0.002897,NHEK@0.00190233,NHLF@0,SKNSHRA@0.0528945, 0 0 0 0 ENSG00000228643.1 ENST00000427831.1 chr2:286567-301515 4 388 14554 intronic 2.12 0 0,1,0 0 0,0,0 0 5.51752095643809 34.54 0 8.62147863130411 57.851 0 12.324721725986 67.843 0 0 chimp,human,macaque,marmoset,orangutan, antisense antisense A549@0.017891,AG04450@0.0085315,BJ@0.013989,GM12878@0.110792,H1HESC@0,HELAS3@0.171424,HEPG2@0.150836,HMEC@0,HSMM@0.035631,HUVEC@0.015047,K562@0.0411065,MCF7@0.002897,NHEK@0.00190233,NHLF@0,SKNSHRA@0.0528945, 0 0 0 0 ENSG00000235779.1 ENST00000457938.1 chr2:305841-307157 2 443 871 intergenic -3.72 1 0,0,0 0 0,0,0 0 0 0 0 0 0 31.4853273137698 80.6188289322618 60.745 0 0 cat,chimp,horse,human,macaque,marmoset,orangutan, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0.004194,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000235779.1 ENST00000416685.1 chr2:306059-309379 2 588 2730 intergenic 4.27 0 0,0,0 0 0,0,0 0 0 0 0 0 0 0 109.529304029304 0 0 0 chimp,human,marmoset,orangutan, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0.004194,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000233684.2 ENST00000430529.1 chr2:317912-336465 2 843 17708 intergenic 2.51 0 0,0,0 0 0,0,0 0 1.79591145245087 0 0 4.01903094646487 5.1 0 9.65021459227468 5.253 0 0 chimp,human,macaque,marmoset,orangutan, lincRNA lincRNA A549@0,AG04450@0,BJ@0.004234,GM12878@0.005548,H1HESC@0.003444,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0.00974,HUVEC@0,K562@0.002722,MCF7@0.0072995,NHEK@0,NHLF@0,SKNSHRA@0.0095495, 0 0 0 0 ENSG00000233684.2 ENST00000436808.2 chr2:318053-342118 4 849 23210 intergenic 5.20 0 0,0,0 0 0,0,0 0 1.37012623325148 0 0 4.33962345439662 5.1 0 8.80810822454871 5.253 0 0 chimp,human,macaque,marmoset,orangutan, lincRNA lincRNA A549@0,AG04450@0,BJ@0.004234,GM12878@0.005548,H1HESC@0.003444,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0.00974,HUVEC@0,K562@0.002722,MCF7@0.0072995,NHEK@0,NHLF@0,SKNSHRA@0.0095495, 0 0 0 0 ENSG00000236856.1 ENST00000431911.1 chr2:388412-416885 2 547 27924 intergenic 7.99 0 0,0,0 0 0,0,0 0 0.470742014038103 0 0 4.62960177624982 0 0 10.8265649620398 0 0 0 human,orangutan, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000226277.1 ENST00000449119.1 chr2:421057-422156 2 422 675 intergenic 0 0 0,0,0 0 0,0,0 0 0 0 0 0 0 1.13507109004739 0 437.346 0 0 chimp,human,macaque,orangutan, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000226277.1 ENST00000449621.1 chr2:421133-422303 2 596 572 intergenic -12.11 0 0,1,0 0 0,0,0 0 0 0 0 0 0 0 0 405.264 0 0 chimp,human,macaque,orangutan, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000223985.1 ENST00000427398.1 chr2:490944-492655 2 508 1201 intergenic 1.43 1 0,0,0 0 0,0,0 0 0 0 0 0 0 0 0 0 0 0 chimp,human,marmoset,orangutan, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000225942.1 ENST00000454477.1 chr2:545805-546667 2 658 202 intergenic 7.08 1 0,0,0 0 0,0,0 0 0 0 0 0 0 0 0 0 0 0 chimp,human,macaque,marmoset,orangutan, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000233633.1 ENST00000444079.1 chr2:558204-578145 5 757 19176 intergenic 1.80 0 0,1,0 0 0,0,0 0 7.9453483521068 0 0 8.37922403003755 0 0 35.0428660826033 0 0 0 chimp,human,macaque,marmoset,orangutan, lincRNA lincRNA A549@0,AG04450@0,BJ@0.0084935,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0.367267,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000233296.1 ENST00000445418.1 chr2:677186-682802 3 1940 3672 exonic 5.88 0 0,1,1 0 0,0,0 0 0 0 5.35979381443299 0 0 5.4639175257732 0 11.4 0 0 chimp,human,marmoset, processed_transcript processed_transcript A549@0.066358,AG04450@0.050296,BJ@0.0369475,GM12878@0.0577805,H1HESC@0.122402,HELAS3@0.220425,HEPG2@0.198486,HMEC@0.025288,HSMM@0.020349,HUVEC@0.0366595,K562@0.030933,MCF7@0.222652,NHEK@0.016176,NHLF@0.025931,SKNSHRA@0.055167, 0 0 0 0 ENSG00000233296.1 ENST00000435573.1 chr2:680081-697371 3 423 16863 encompassing 3.44 1 0,0,0 0 0,0,0 0 0 0 0 0.132360789895036 0 0 0.82968629543972 0 0 0 chimp,human,macaque,orangutan, processed_transcript processed_transcript A549@0.066358,AG04450@0.050296,BJ@0.0369475,GM12878@0.0577805,H1HESC@0.122402,HELAS3@0.220425,HEPG2@0.198486,HMEC@0.025288,HSMM@0.020349,HUVEC@0.0366595,K562@0.030933,MCF7@0.222652,NHEK@0.016176,NHLF@0.025931,SKNSHRA@0.055167, 0 0 0 0 ENSG00000233970.1 ENST00000439196.1 chr2:692083-693235 2 569 581 intergenic 0.64 0 0,0,0 0 0,0,0 0 0 0 0 0 0 0 0 0 0 0 chimp,human,macaque,orangutan, antisense antisense A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0.008133,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0.0039805, 0 0 0 0 ENSG00000227713.1 ENST00000433724.1 chr2:724966-731195 2 491 5736 intergenic -3.96 0 0,1,0 0 0,0,0 0 0 0 0 0.951882845188284 0 0 1.47576708507671 59.456 0 0 human,marmoset,orangutan, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000227713.1 ENST00000456255.1 chr2:729306-731224 2 387 1529 intergenic -4.22 0 0,1,1 0 0,0,0 0 0 0 0 3.57096141268803 0 0 5.53629823413996 59.456 0 0 human,macaque,marmoset,orangutan, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000231173.1 ENST00000431542.1 chr2:741977-749856 2 254 7623 intergenic -7.91 0 0,0,0 0 0,0,0 0 0 0 0 2.11648957103503 0 0 18.8854781582054 0 0 0 chimp,human,orangutan, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000223751.1 ENST00000425850.1 chr2:742488-747767 2 533 4744 intergenic -1.69 0 0,1,0 0 0,0,0 0 0 0 30.2701688555347 0 0 47.2607879924953 0 0 0 0 chimp,human,orangutan, lincRNA lincRNA A549@0.005163,AG04450@0,BJ@0,GM12878@0,H1HESC@0.017935,HELAS3@0.0248035,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0.008489, 0 0 0 0 ENSG00000237667.1 ENST00000414556.1 chr2:779837-864112 4 1517 82752 intergenic 5.02 1 0,0,0 0 0,0,0 0 0 0 0 0.993752416860015 0 34.0678971654581 7.62354988399072 203.914 0 0 chimp,human,marmoset,orangutan, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0.002518,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000237667.1 ENST00000415700.1 chr2:780348-863877 3 533 82992 intergenic 2.85 0 0,0,0 0 0,0,0 0 0 0 0 0.990878638904955 0 0 7.6015037593985 242.116 0 0 chimp,human,macaque,marmoset,orangutan, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0.002518,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000228799.1 ENST00000445279.1 chr2:895902-901137 4 690 4539 intergenic -0.41 0 0,0,0 0 0,0,0 0 0 0 0 0 0 0 10.7999559374312 0 0 0 chimp,human,macaque,orangutan, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000228799.1 ENST00000449405.1 chr2:897183-900983 3 365 3431 intergenic -12.84 0 0,1,0 0 0,0,0 0 0 0 0 0 0 0 14.2876712328767 0 0 0 chimp,human,macaque,orangutan, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000234796.1 ENST00000427019.1 chr2:906612-916810 2 587 9609 intergenic 7.05 0 0,1,0 0 0,0,0 0 0 0 0 0.437090227911333 0 231.454855195911 3.6607347278593 0 0 0 chimp,human, antisense antisense A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000235688.1 ENST00000456949.1 chr2:945320-945960 2 530 108 intergenic 0.78 0 0,0,1 0 0,0,0 0 0 0 0 0 7.44 0 0 41.538 0 0 chimp,human,macaque,orangutan, antisense antisense A549@0,AG04450@0,BJ@0.286561,GM12878@0,H1HESC@5.62822,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0.011188,K562@0,MCF7@0.038476,NHEK@0.0642757,NHLF@0.0072945,SKNSHRA@0.0341545, 0 0 0 0 ENSG00000235403.1 ENST00000437132.1 chr2:1054819-1064027 2 430 8776 intronic -1.93 0 0,0,0 0 0,0,0 0 0 0 0 0 0 0 0 9.506 0 0 chimp,human,macaque, antisense antisense A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0.004763,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000236665.1 ENST00000428335.1 chr2:1153996-1156110 3 533 1577 intronic -7.97 0 0,0,0 0 0,0,0 0 0 0 0 0 0 0 0 0 0 0 chimp,human,macaque,marmoset,orangutan, antisense antisense A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000233553.1 ENST00000457467.1 chr2:1344816-1350340 2 848 4674 intronic 5.60 0 0,1,0 0 0,0,0 0 0 0 0 0 0 0 0 0 0 0 chimp,human,macaque,orangutan, antisense antisense A549@0,AG04450@0,BJ@0.0042095,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000228613.1 ENST00000438247.1 chr2:1550437-1623885 3 783 72661 intergenic 3.33 0 0,1,0 0 0,0,0 0 0 0 0 0.193336177591831 0 34.9093231162197 10.9494226614002 0 0 0 chimp,human,macaque,orangutan, antisense antisense A549@0.003514,AG04450@0.0103845,BJ@0.004117,GM12878@0,H1HESC@0.860118,HELAS3@0.044261,HEPG2@0,HMEC@0.005209,HSMM@0,HUVEC@0.0568445,K562@0,MCF7@0.573867,NHEK@0.00786133,NHLF@0,SKNSHRA@0.048603, 0 0 0 0 ENSG00000231482.2 ENST00000419028.2 chr2:1576326-1584083 2 553 7202 intergenic -1.18 0 0,0,0 0 0,0,0 0 0 0 0 0 0 0 0 84.985 0 0 chimp,elephant,horse,human,macaque,orangutan, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0.057544,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0.108859,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000203635.2 ENST00000366424.2 chr2:1624282-1629191 2 1639 3268 intergenic 9.92 0 0,0,0 0 0,0,0 0 0 0 0 0 0 0 13.0455936352509 0 0 0 chimp,human,macaque,orangutan, lincRNA lincRNA A549@0.0026455,AG04450@0.113198,BJ@0.028858,GM12878@0,H1HESC@2.24923,HELAS3@0.133085,HEPG2@0.006649,HMEC@0.00499,HSMM@0.077973,HUVEC@0.146593,K562@0,MCF7@2.16427,NHEK@0.09193,NHLF@0.0396015,SKNSHRA@0.212392, 0 0 0 0 ENSG00000232057.1 ENST00000426976.1 chr2:1828184-1832439 2 3401 852 intronic 4.22 1 0,0,0 0 0,0,0 0 0 0 0 0 0 0 0 0 0 0 chimp,human,macaque, antisense antisense A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0.0374275,HELAS3@0.027223,HEPG2@0.0104205,HMEC@0,HSMM@0.0013395,HUVEC@0,K562@0,MCF7@0,NHEK@0.00458,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000225619.1 ENST00000422175.1 chr2:2323004-2330882 2 3164 4712 intronic 4.83 0 0,1,1 0 0,0,0 73.7395701643489 76.8353140916808 75.525 97.1362199747156 85.2784380305603 61.796 139.760429835651 90.8705432937182 68.081 0 0 chimp,elephant,guinea_pig,horse,human,macaque,marmoset,orangutan,panda, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0.000919,HELAS3@0.0008385,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0.005741,SKNSHRA@0.014656, 0 0 0 0 ENSG00000225619.1 ENST00000448106.1 chr2:2323016-2330880 2 3228 4634 intronic 4.83 0 0,0,1 0 0,0,0 72.2775712515489 78.1286145878291 75.525 95.7642503097893 86.4138972809668 61.796 138.221809169765 91.5822183858438 68.081 0 0 chimp,elephant,guinea_pig,horse,human,macaque,marmoset,orangutan,panda, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0.000919,HELAS3@0.0008385,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0.005741,SKNSHRA@0.014656, 0 0 0 0 ENSG00000234929.1 ENST00000414065.1 chr2:2645761-2660402 2 545 14094 intergenic 6.87 0 0,1,0 0 0,0,0 0 0 0 0 6.72789839648077 0 0 17.1428267347808 0 0 0 chimp,human,macaque,marmoset,orangutan, lincRNA lincRNA A549@0.003968,AG04450@0,BJ@0,GM12878@0,H1HESC@0.021732,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000227364.1 ENST00000457813.1 chr2:2733680-2734729 2 366 681 intergenic -1.18 0 0,0,0 0 0,0,0 0 0 0 0 0 0 0 0 0 0 0 human,marmoset, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0.0061655, 0 0 0 0 ENSG00000237720.1 ENST00000452701.1 chr2:2838036-2842163 3 571 3552 intergenic -2.90 0 0,1,0 0 0,0,0 0 0 0 11.0315236427321 0 0 13.1786339754816 49.9988738738739 0 0 0 chimp,horse,human,macaque,marmoset,orangutan, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0.003512,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0.181194, 0 0 0 0 ENSG00000228391.1 ENST00000437610.1 chr2:2874330-2875003 2 576 95 intergenic -0.74 1 0,0,0 0 0,0,0 0 0 0 0 0 0 0 0 0 0 0 NA lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0.0498055, 0 0 0 0 ENSG00000234423.1 ENST00000457478.1 chr2:2898820-3129798 7 2337 228629 intergenic 2.54 0 0,0,0 0 0,0,0 0 2.51240656259705 0 1.69875909285409 3.57757327373168 2.484 1.81643132220796 6.91007265045117 2.7 0 0 chimp,human,macaque,marmoset, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0.0012415,HELAS3@0.001781,HEPG2@0.004564,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0.176149, 0 0 0 0 ENSG00000236760.1 ENST00000425776.1 chr2:3135353-3136877 2 716 806 intergenic 1.78 0 0,0,0 0 0,0,0 0 0 0 0 0 0 6.59217877094972 6.07444168734491 0 0 0 chimp,human,macaque,marmoset,orangutan, lincRNA lincRNA A549@0.0127915,AG04450@0,BJ@0.017745,GM12878@0.025455,H1HESC@0.0040535,HELAS3@0.0413075,HEPG2@0.116942,HMEC@0,HSMM@0.003175,HUVEC@0,K562@0.0178055,MCF7@0.0028635,NHEK@0,NHLF@0,SKNSHRA@0.0549245, 0 0 0 0 ENSG00000236760.1 ENST00000419347.1 chr2:3135757-3149551 2 414 13378 intergenic 2.63 0 0,0,0 0 0,0,0 0 0 0 0 0 0 11.4009661835749 6.54612049633727 0 0 0 chimp,human,macaque,marmoset,orangutan, lincRNA lincRNA A549@0.0127915,AG04450@0,BJ@0.017745,GM12878@0.025455,H1HESC@0.0040535,HELAS3@0.0413075,HEPG2@0.116942,HMEC@0,HSMM@0.003175,HUVEC@0,K562@0.0178055,MCF7@0.0028635,NHEK@0,NHLF@0,SKNSHRA@0.0549245, 0 0 0 0 ENSG00000226649.1 ENST00000454530.1 chr2:3160527-3161568 3 432 605 intergenic 1.76 0 0,0,0 0 0,0,0 0 0 0 0 0 0 0 0 0 0 0 chimp,human,macaque,marmoset,orangutan, lincRNA lincRNA A549@0,AG04450@0.0408335,BJ@0,GM12878@0,H1HESC@0,HELAS3@0.031393,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0.012785, 0 0 0 0 ENSG00000224885.1 ENST00000454977.1 chr2:3302112-3305236 2 716 2406 intronic 0.52 0 0,0,1 0 0,0,0 0 0 0 0 0 1.53 0 0 1.59 0 0 chimp,human,marmoset,orangutan, sense_intronic sense_intronic A549@0.2418,AG04450@0.115774,BJ@0.0801995,GM12878@0.027187,H1HESC@0.284539,HELAS3@0.0443595,HEPG2@0.073787,HMEC@0.020042,HSMM@0.046563,HUVEC@0.085622,K562@0.108967,MCF7@0.115254,NHEK@0.149204,NHLF@0.01602,SKNSHRA@0.369981, 0 0 0 0 ENSG00000225234.1 ENST00000453806.1 chr2:3485013-3486180 2 906 259 intronic 11.33 0 0,0,0 0 0,0,0 0 0 0 0 0 0 0 0 0 0 0 chimp,human,macaque, antisense antisense A549@0,AG04450@0.020374,BJ@0.007128,GM12878@0,H1HESC@0.141981,HELAS3@0,HEPG2@0.0348335,HMEC@0,HSMM@0,HUVEC@0.0119105,K562@0,MCF7@0.0177215,NHEK@0,NHLF@0.004298,SKNSHRA@0.007509, 0 0 0 0 ENSG00000235078.1 ENST00000450917.1 chr2:3523046-3526968 2 972 2948 exonic 6.29 0 0,1,0 0 0,0,0 0 0 0 28.0853909465021 0 0 103.104938271605 0 0 0 0 chimp,dog,horse,human,macaque,marmoset,orangutan, antisense antisense A549@0.221502,AG04450@0.0676685,BJ@0.0692335,GM12878@0.0395295,H1HESC@0.134914,HELAS3@0.256707,HEPG2@0.152162,HMEC@0.008408,HSMM@0.011702,HUVEC@0.103565,K562@0.0960015,MCF7@0.119785,NHEK@0.0278757,NHLF@0.019988,SKNSHRA@0.404961, 0 0 0 0 ENSG00000242282.2 ENST00000438482.1 chr2:3580814-3584459 3 911 2730 intronic 3.50 0 1,1,1 1 0,0,0 0 0 0 0 0 0 0 0 0 0 0 NA processed_transcript processed_transcript A549@3.19924,AG04450@1.03783,BJ@1.85576,GM12878@0.462706,H1HESC@0.922889,HELAS3@2.36054,HEPG2@1.46114,HMEC@0.995302,HSMM@0.981974,HUVEC@0.421557,K562@2.05842,MCF7@0.559793,NHEK@0.206218,NHLF@1.31348,SKNSHRA@1.82002, 0 0 0 0 ENSG00000234171.1 ENST00000438436.1 chr2:3606082-3609324 3 1204 2034 exonic 10.49 0 1,1,1 1 0,0,0 0 0 18.038 0 3.05506391347099 24.695 0 4.65929203539823 23.928 0 0 chimp,human,macaque,orangutan, lincRNA processed_transcript A549@5.37634,AG04450@1.23978,BJ@1.19281,GM12878@1.29795,H1HESC@3.70892,HELAS3@4.66766,HEPG2@4.36418,HMEC@2.7517,HSMM@2.38748,HUVEC@1.31102,K562@1.45656,MCF7@0.678696,NHEK@1.21005,NHLF@1.4445,SKNSHRA@3.58559, 0 0 0 0 ENSG00000234171.1 ENST00000426725.1 chr2:3606168-3609321 2 834 2317 exonic -0.60 0 1,1,1 1 0,0,0 0 0 18.038 0 2.68191627104014 24.695 0 4.09020284851101 23.928 0 0 chimp,human,macaque,marmoset,orangutan, lincRNA processed_transcript A549@5.37634,AG04450@1.23978,BJ@1.19281,GM12878@1.29795,H1HESC@3.70892,HELAS3@4.66766,HEPG2@4.36418,HMEC@2.7517,HSMM@2.38748,HUVEC@1.31102,K562@1.45656,MCF7@0.678696,NHEK@1.21005,NHLF@1.4445,SKNSHRA@3.58559, 0 0 0 0 ENSG00000247886.1 ENST00000500229.1 chr2:3616113-3622828 2 2539 4174 exonic 5.54 0 0,1,1 1 0,0,0 0 0 10.78 0.694761717211501 0 75.726 0.559275305238283 0 116.628 0 0 human, lincRNA lincRNA A549@0.177252,AG04450@0.0691995,BJ@0.0624745,GM12878@0.1506,H1HESC@0.181605,HELAS3@0.165633,HEPG2@0.202205,HMEC@0.156308,HSMM@0.163369,HUVEC@0.161966,K562@0.10128,MCF7@0.227456,NHEK@0.0731247,NHLF@0.118792,SKNSHRA@0.258863, 0 0 0 0 ENSG00000237370.1 ENST00000456450.1 chr2:3650987-3651832 2 691 152 exonic 2.57 0 0,0,1 0 0,0,0 0 0 9.24 0 0 21.387 0 0 36.304 0 0 chimp,human,macaque,orangutan, antisense antisense A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0.006149,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0.466013, 0 0 0 0 ENSG00000224661.1 ENST00000441632.1 chr2:3750175-3751743 2 805 761 exonic -1.69 0 0,1,0 0 0,0,0 66.1490683229814 45.2496714848883 0 85.0086956521739 35.8896189224704 0 75.8534161490683 47.2536136662286 94.862 0 0 chimp,horse,human,macaque,orangutan, antisense antisense A549@0,AG04450@0,BJ@0,GM12878@0.006581,H1HESC@0.0061325,HELAS3@0.0065775,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0.0337375, 0 0 0 0 ENSG00000227363.1 ENST00000451101.1 chr2:3891774-3895001 2 715 2510 intergenic 7.83 1 0,0,0 0 0,0,0 0 0 0 13.8167832167832 2.80278884462151 11.932 23.2517482517483 1.89442231075697 16.333 0 0 chimp,dog,horse,human,macaque,marmoset,orangutan,pig,rabbit,rat, lincRNA lincRNA A549@0.0385765,AG04450@0,BJ@0,GM12878@0,H1HESC@0.295914,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0.00368267,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000237401.1 ENST00000454455.1 chr2:4005245-4021660 3 2451 13960 intergenic 3.07 0 0,0,0 0 0,0,0 0 5.50243553008596 0 1.72174622603019 6.84598853868195 0 1.9828641370869 8.32335243553009 0 0 0 chimp,human,macaque,marmoset,panda, lincRNA lincRNA A549@0,AG04450@0.0065585,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000237401.1 ENST00000425949.1 chr2:4007241-4021609 5 1470 12890 intergenic 8.73 0 0,0,0 0 0,0,0 0 5.95919317300233 0 0.782312925170068 6.56795965865012 0 0 8.20923196276183 0 0 0 human,macaque,marmoset,orangutan, lincRNA lincRNA A549@0,AG04450@0.0065585,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000237401.1 ENST00000453880.1 chr2:4007852-4021617 3 809 12952 intergenic 4.54 0 0,0,0 0 0,0,0 0 5.93066707844348 0 0 6.5365194564546 0 0 8.03428042001235 0 0 0 elephant,human,macaque,marmoset,orangutan, lincRNA lincRNA A549@0,AG04450@0.0065585,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000237401.1 ENST00000431730.1 chr2:4020435-4021285 2 379 469 intergenic 6.23 0 0,1,0 0 0,0,0 0 0 0 0 0 0 0 0 0 0 0 human,macaque,marmoset,orangutan, lincRNA lincRNA A549@0,AG04450@0.0065585,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000237401.1 ENST00000457371.1 chr2:4020436-4021268 2 389 441 intergenic 11.21 0 0,1,0 0 0,0,0 0 0 0 0 0 0 0 0 0 0 0 human,macaque,marmoset,orangutan, lincRNA lincRNA A549@0,AG04450@0.0065585,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000229550.1 ENST00000442831.1 chr2:4184234-4188321 3 604 3479 intergenic 2.21 0 0,0,0 0 0,0,0 0 0 0 0 0 0 3.89072847682119 0.914055763150331 0 0 0 cat,chimp,elephant,guinea_pig,horse,human,macaque,orangutan, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000231532.1 ENST00000412134.1 chr2:4675812-4703805 5 2658 25327 intergenic 2.61 0 0,0,1 0 0,0,0 25.561324303988 0 0 46.1636568848758 0.611639752043274 0 57.5462753950339 0.893591819007383 5.346 0 0 chimp,dog,elephant,human,macaque,marmoset,orangutan, lincRNA lincRNA A549@0.029385,AG04450@0,BJ@0,GM12878@0.0171985,H1HESC@0.053934,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0.000755,NHEK@0,NHLF@0,SKNSHRA@0.004435, 0 0 0 0 ENSG00000231532.1 ENST00000432314.1 chr2:4677790-4690945 2 625 12528 intergenic -1.43 0 0,0,1 0 0,0,0 0 0 0 0 1.06481481481481 0 0 1.19891443167305 0 0 0 chimp,human, lincRNA lincRNA A549@0.029385,AG04450@0,BJ@0,GM12878@0.0171985,H1HESC@0.053934,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0.000755,NHEK@0,NHLF@0,SKNSHRA@0.004435, 10 6 0 0 ENSG00000231532.1 ENST00000421212.1 chr2:4677790-4703793 4 503 25494 intergenic -3.73 0 0,0,1 0 0,0,0 0 0 0 0 0.607633168588688 0 0 0.887738291362674 5.346 0 0 chimp,human,macaque,marmoset,orangutan, lincRNA lincRNA A549@0.029385,AG04450@0,BJ@0,GM12878@0.0171985,H1HESC@0.053934,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0.000755,NHEK@0,NHLF@0,SKNSHRA@0.004435, 0 0 0 0 ENSG00000232835.1 ENST00000425763.1 chr2:5689912-5696163 2 317 5932 intergenic -6.59 1 0,0,1 0 0,0,0 0 0 0 0 0 0 0 0 1.41 0 0 cat,chimp,dog,human,marmoset,orangutan,panda, lincRNA lincRNA A549@0,AG04450@0.0369135,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0.0061165,SKNSHRA@0, 0 0 0 0 ENSG00000224128.1 ENST00000458264.1 chr2:5742637-5831620 2 466 88515 intergenic -4.21 0 0,0,0 0 0,0,0 4.51931330472103 5.59445291758459 355.544 5.64377682403433 4.92914195334124 123.917 11.2038626609442 6.94840422527255 115.499 0 0 chimp,human,macaque, antisense antisense A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000230090.1 ENST00000453678.1 chr2:5758459-5831250 7 1051 71728 intergenic -1.38 0 0,1,0 0 0,0,0 0 5.97003959402186 106.002 2.05518553758325 5.23660216372964 16.629 2.28353948620362 7.0651210127147 19.526 0 0 chimp,elephant,horse,human,macaque,marmoset,orangutan, antisense antisense A549@0,AG04450@0.004452,BJ@0,GM12878@0,H1HESC@0.0039215,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0.0357895,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0.0152635, 0 0 0 0 ENSG00000230090.1 ENST00000420221.1 chr2:5817274-5831178 3 240 13660 intergenic -4.73 0 0,0,0 0 0,0,0 0 1.05051244509517 106.002 3.375 1.749121522694 17.709 3.75 2.74560761346999 20.726 0 0 chimp,horse,human,macaque,marmoset,orangutan, antisense antisense A549@0,AG04450@0.004452,BJ@0,GM12878@0,H1HESC@0.0039215,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0.0357895,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0.0152635, 0 0 0 0 ENSG00000236106.1 ENST00000413960.1 chr2:5866581-5870474 2 1744 2147 intergenic 0.48 0 0,1,1 0 0,0,0 0 0 0 0 0 16.139 0 0 18.511 0 0 chimp,elephant,human,macaque,marmoset,orangutan, lincRNA lincRNA A549@0.0024865,AG04450@0.0105305,BJ@0,GM12878@0,H1HESC@0.689945,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0.0094275,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0.002235,SKNSHRA@0.011369, 0 0 0 0 ENSG00000237266.1 ENST00000450397.1 chr2:5950773-5952728 4 407 1542 intergenic -16.14 0 0,0,0 0 0,0,0 80.995085995086 18.4526588845655 0 0 3.8780804150454 0 26.8181818181818 4.46303501945525 0 0 0 chimp,human,macaque,marmoset,orangutan, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000232044.3 ENST00000456327.1 chr2:6072819-6120819 5 1429 46563 intergenic 8.19 0 0,1,0 0 0,0,0 8.63610916724983 2.50123488606834 15.067 6.11196641007698 2.65524128599961 20.225 16.0888733379986 5.01196228765329 23.073 0 0 chimp,human,macaque,marmoset,orangutan, lincRNA lincRNA A549@0.0041165,AG04450@0.001211,BJ@0.001215,GM12878@0,H1HESC@0.066036,HELAS3@0,HEPG2@0,HMEC@0.001538,HSMM@0.0124765,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0.61335, 0 0 0 0 ENSG00000232044.3 ENST00000431188.1 chr2:6072920-6125025 5 3324 48773 intergenic 2.89 0 0,0,0 0 0,0,0 15.1218411552347 2.38789904250302 27.695 18.0917569193742 2.53492711131159 28.386 19.661853188929 5.06833698972792 31.623 0 0 chimp,dog,horse,human,macaque,marmoset,orangutan, lincRNA lincRNA A549@0.0041165,AG04450@0.001211,BJ@0.001215,GM12878@0,H1HESC@0.066036,HELAS3@0,HEPG2@0,HMEC@0.001538,HSMM@0.0124765,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0.61335, 0 0 0 0 ENSG00000232044.3 ENST00000533435.1 chr2:6111091-6114382 1 3291 0 intergenic -3.32 1 0,0,1 0 0,1,0 0 0 0 0 0 0 0 0 0 1 1 chimp,human,macaque,marmoset,orangutan, lincRNA TEC A549@0.0041165,AG04450@0.001211,BJ@0.001215,GM12878@0,H1HESC@0.066036,HELAS3@0,HEPG2@0,HMEC@0.001538,HSMM@0.0124765,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0.61335, 0 0 0 0 ENSG00000232044.3 ENST00000391666.2 chr2:6111712-6114374 1 2662 0 intergenic -3.32 1 0,0,1 0 0,1,0 0 0 0 0 0 0 0 0 0 1 1 chimp,human,macaque,marmoset,orangutan, lincRNA lincRNA A549@0.0041165,AG04450@0.001211,BJ@0.001215,GM12878@0,H1HESC@0.066036,HELAS3@0,HEPG2@0,HMEC@0.001538,HSMM@0.0124765,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0.61335, 0 0 0 0 ENSG00000232044.3 ENST00000444416.1 chr2:6122110-6125029 2 2693 224 intergenic 2.08 0 0,1,0 0 0,0,0 18.6650575566283 0 0 21.9621240252506 0 0 22.1893798737467 0 4.55 0 0 cat,chimp,dog,horse,human,macaque,marmoset,orangutan,panda, lincRNA lincRNA A549@0.0041165,AG04450@0.001211,BJ@0.001215,GM12878@0,H1HESC@0.066036,HELAS3@0,HEPG2@0,HMEC@0.001538,HSMM@0.0124765,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0.61335, 0 0 0 0 ENSG00000232044.3 ENST00000431182.1 chr2:6122576-6125850 2 706 2566 intergenic -2.08 0 0,0,0 0 0,0,0 35.8300283286119 9.7307092751364 0 65.8725212464589 1.76968043647701 17.902 74.4490084985836 0 19.992 0 0 cat,chimp,cow,elephant,horse,human,macaque,marmoset,orangutan, lincRNA lincRNA A549@0.0041165,AG04450@0.001211,BJ@0.001215,GM12878@0,H1HESC@0.066036,HELAS3@0,HEPG2@0,HMEC@0.001538,HSMM@0.0124765,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0.61335, 0 0 0 0 ENSG00000232044.3 ENST00000450794.1 chr2:6122703-6141407 2 578 18124 intergenic -3.42 0 0,0,0 0 0,0,0 2.82352941176471 9.84070845288016 23.392 6.00692041522491 10.5574928271905 51.131 7.14532871972318 15.9351688369013 58.475 0 0 chimp,horse,human,macaque,marmoset,mouse,orangutan,rat, lincRNA lincRNA A549@0.0041165,AG04450@0.001211,BJ@0.001215,GM12878@0,H1HESC@0.066036,HELAS3@0,HEPG2@0,HMEC@0.001538,HSMM@0.0124765,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0.61335, 0 0 0 0 ENSG00000234275.1 ENST00000425125.1 chr2:6453086-6465778 3 576 12112 intergenic 1.28 0 0,0,0 0 0,0,0 16.4236111111111 4.63432959048877 99.76 15.203125 8.77047556142669 120.908 13.8472222222222 9.30672060766182 118.006 0 0 chimp,cow,human,macaque,marmoset,orangutan,panda, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0.009415,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000227007.1 ENST00000448901.1 chr2:6506142-6515554 3 4206 5202 intergenic 0.88 1 0,0,0 0 0,0,0 1.8906324298621 19.7768166089965 0 4.25725154541132 15.6853133410227 0 6.60722776985259 20.4225297962322 0 0 0 chimp,human,macaque,marmoset,orangutan, lincRNA lincRNA A549@0.003205,AG04450@0.0030645,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0.000917,SKNSHRA@0.0013215, 0 0 0 0 ENSG00000226488.1 ENST00000436082.1 chr2:6636135-6643938 3 525 7274 intergenic -3.48 0 0,1,0 0 0,0,0 0 3.31427000274952 0 0 7.5647511685455 0 345.754285714286 50.2750893593621 87.48 0 0 chimp,human,macaque,orangutan, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000234815.1 ENST00000455317.1 chr2:6766241-6773919 3 291 7383 intergenic 0 1 0,0,0 0 0,0,0 0 6.11702559934986 0 0 3.80224840850603 0 0 5.98929974265204 0 0 0 chimp,human,macaque,marmoset,orangutan,pig, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000234815.1 ENST00000456028.1 chr2:6766244-6774838 3 537 8053 intergenic 1.84 1 0,1,0 0 0,0,0 0 5.60809636160437 0 0 3.48590587358748 22.036 0 5.49099714392152 23.126 0 0 cat,chimp,cow,elephant,horse,human,macaque,marmoset,orangutan,rabbit, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000236172.1 ENST00000431336.1 chr2:6779255-6790651 2 567 10827 intergenic 1.71 0 0,0,0 0 0,0,0 0 16.0858040084973 0 0 15.6019211231181 0 0 16.3408146300914 0 0 0 chimp,human,macaque,orangutan, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000236172.1 ENST00000425711.1 chr2:6789237-6790442 2 421 782 intergenic 2.92 0 0,0,0 0 0,0,0 0 0 0 0 0 0 0 0 0 0 0 chimp,elephant,horse,human,macaque,marmoset,orangutan, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000236172.1 ENST00000415657.1 chr2:6789237-6790576 2 614 723 intergenic 3.97 0 0,0,0 0 0,0,0 0 0 0 0 0 0 0 0 0 0 0 chimp,human,macaque,orangutan, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000236172.1 ENST00000450467.1 chr2:6789238-6790375 2 356 779 intergenic 4.07 0 0,0,0 0 0,0,0 0 0 0 0 0 0 0 0 0 0 0 chimp,elephant,horse,human,macaque,marmoset,orangutan, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000205837.3 ENST00000412528.1 chr2:6868309-6871454 4 420 2719 intergenic -2.43 0 0,0,0 0 0,0,0 0 0 0 0 0 0 0 0 0 0 0 chimp,human,macaque,marmoset,orangutan, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0.001892,H1HESC@0.0062605,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0.0011525,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0.002133, 0 0 0 0 ENSG00000205837.3 ENST00000424179.1 chr2:6869300-6871358 3 599 1455 intergenic -1.03 0 0,1,0 0 0,0,0 0 0 0 0 0 0 0 0 0 0 0 chimp,human,macaque,marmoset,orangutan, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0.001892,H1HESC@0.0062605,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0.0011525,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0.002133, 0 0 0 0 ENSG00000205837.3 ENST00000382045.3 chr2:6869300-6910442 6 2125 39007 intergenic 5.62 0 0,1,0 0 0,0,0 0 11.0949573153537 0 0 14.3061758145974 0 0 15.5164457661445 0 0 0 chimp,human,macaque,marmoset,orangutan, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0.001892,H1HESC@0.0062605,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0.0011525,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0.002133, 0 0 0 0 ENSG00000225964.1 ENST00000366140.2 chr2:6968645-6973662 3 796 4217 intergenic -7.06 0 0,0,1 0 0,0,0 0 0 0 0 0 0 0 1.24994071614892 0 0 0 chimp,human,macaque,marmoset,orangutan, antisense antisense A549@0,AG04450@0,BJ@0,GM12878@0.183186,H1HESC@0.0025965,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0.0094655,HUVEC@0,K562@0.0497105,MCF7@0,NHEK@0.00319533,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000225964.1 ENST00000414795.1 chr2:6969011-6980595 4 502 11076 intergenic -7.36 0 0,0,0 0 0,0,0 0 0 0 0 0 0 0 0.475893824485374 0 0 0 human,macaque,orangutan, antisense antisense A549@0,AG04450@0,BJ@0,GM12878@0.183186,H1HESC@0.0025965,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0.0094655,HUVEC@0,K562@0.0497105,MCF7@0,NHEK@0.00319533,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000228203.1 ENST00000418970.1 chr2:7052408-7058813 5 2342 4055 intronic 4.23 1 0,0,0 0 0,0,0 0 6.95635018495684 0 0 3.84266337854501 0 0 4.00838471023428 0 0 0 chimp,human,macaque,marmoset,orangutan, lincRNA processed_transcript A549@0.149397,AG04450@0,BJ@0.005072,GM12878@0.117416,H1HESC@0.924133,HELAS3@0.01191,HEPG2@0.0883645,HMEC@0,HSMM@0,HUVEC@0.29936,K562@0.385458,MCF7@0.000696,NHEK@0.00168767,NHLF@0.0006605,SKNSHRA@3.86311, 0 0 0 0 ENSG00000228203.1 ENST00000426122.1 chr2:7053758-7058798 3 576 4460 intronic -5.40 0 0,0,0 0 0,0,0 0 6.32466367713004 0 0 3.49372197309417 0 0 3.64439461883408 0 0 0 chimp,human,macaque,orangutan, lincRNA processed_transcript A549@0.149397,AG04450@0,BJ@0.005072,GM12878@0.117416,H1HESC@0.924133,HELAS3@0.01191,HEPG2@0.0883645,HMEC@0,HSMM@0,HUVEC@0.29936,K562@0.385458,MCF7@0.000696,NHEK@0.00168767,NHLF@0.0006605,SKNSHRA@3.86311, 0 0 0 0 ENSG00000228203.1 ENST00000424351.1 chr2:7054683-7058813 2 2952 1176 intronic 3.63 0 0,0,1 0 0,0,0 9.55555555555556 0 0 0 13.25 0 0 13.8214285714286 0 1 1 chimp,human,macaque,marmoset,orangutan, lincRNA retained_intron A549@0.149397,AG04450@0,BJ@0.005072,GM12878@0.117416,H1HESC@0.924133,HELAS3@0.01191,HEPG2@0.0883645,HMEC@0,HSMM@0,HUVEC@0.29936,K562@0.385458,MCF7@0.000696,NHEK@0.00168767,NHLF@0.0006605,SKNSHRA@3.86311, 0 0 0 0 ENSG00000228203.1 ENST00000439208.1 chr2:7056982-7058794 2 755 1055 intronic -5.40 0 0,0,1 0 0,0,0 0 0 0 0 14.7696682464455 0 0 15.40663507109 0 0 0 chimp,human,macaque,orangutan, lincRNA processed_transcript A549@0.149397,AG04450@0,BJ@0.005072,GM12878@0.117416,H1HESC@0.924133,HELAS3@0.01191,HEPG2@0.0883645,HMEC@0,HSMM@0,HUVEC@0.29936,K562@0.385458,MCF7@0.000696,NHEK@0.00168767,NHLF@0.0006605,SKNSHRA@3.86311, 0 0 0 0 ENSG00000228203.1 ENST00000437589.1 chr2:7057163-7058810 2 586 1059 intronic -5.40 0 0,0,0 0 0,0,0 0 0 0 0 14.71388101983 0 0 15.3484419263456 0 0 0 chimp,human,macaque,marmoset,orangutan, lincRNA processed_transcript A549@0.149397,AG04450@0,BJ@0.005072,GM12878@0.117416,H1HESC@0.924133,HELAS3@0.01191,HEPG2@0.0883645,HMEC@0,HSMM@0,HUVEC@0.29936,K562@0.385458,MCF7@0.000696,NHEK@0.00168767,NHLF@0.0006605,SKNSHRA@3.86311, 0 0 0 0 ENSG00000223884.1 ENST00000415520.1 chr2:7202858-7218011 3 527 14622 intronic 0.12 0 0,1,0 0 0,0,0 0 0 0 0 0.125837778689646 5.26 0 0.159417316372589 46.399 0 0 chimp,human,macaque,marmoset,orangutan, antisense antisense A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000223884.1 ENST00000428379.1 chr2:7214635-7218011 3 552 2820 intergenic 0.12 0 0,1,1 0 0,0,0 0 0 0 0 0 5.26 0 0 46.399 0 0 chimp,human,macaque,marmoset,orangutan, antisense antisense A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000229727.1 ENST00000441014.1 chr2:7561392-7586021 5 464 24157 intergenic -4.62 0 0,0,1 0 0,0,0 0 9.26427122573167 93.004 0 6.74061348677402 168.72 0 9.7385436933394 171.82 0 0 chimp,horse,human,macaque,marmoset,orangutan, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0.028025,H1HESC@0.0500895,HELAS3@0.006821,HEPG2@0.0155155,HMEC@0,HSMM@0,HUVEC@0.0024305,K562@0.0179535,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0.198463, 0 0 0 0 ENSG00000229727.1 ENST00000435062.1 chr2:7561396-7590385 8 2217 26758 intergenic -0.73 1 0,0,1 0 0,0,0 0 8.3637416847298 93.004 0 6.08539502204948 168.72 0 8.86456386874953 171.82 0 0 chimp,horse,human,macaque,marmoset,orangutan, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0.028025,H1HESC@0.0500895,HELAS3@0.006821,HEPG2@0.0155155,HMEC@0,HSMM@0,HUVEC@0.0024305,K562@0.0179535,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0.198463, 0 0 0 0 ENSG00000229727.1 ENST00000419713.1 chr2:7561402-7590385 6 911 28062 intergenic -1.26 1 0,0,1 0 0,0,0 0 7.97509087021595 93.004 0 5.80261563680422 168.72 0 8.45264058156939 171.82 0 0 chimp,human,macaque,marmoset,orangutan, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0.028025,H1HESC@0.0500895,HELAS3@0.006821,HEPG2@0.0155155,HMEC@0,HSMM@0,HUVEC@0.0024305,K562@0.0179535,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0.198463, 0 0 0 0 ENSG00000229727.1 ENST00000444955.1 chr2:7561417-7563176 2 573 1184 intergenic -3.71 0 0,0,0 0 0,0,0 0 0 93.004 20.0750436300175 0 168.72 20.8394415357766 0 171.82 0 0 chimp,elephant,human,marmoset,orangutan, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0.028025,H1HESC@0.0500895,HELAS3@0.006821,HEPG2@0.0155155,HMEC@0,HSMM@0,HUVEC@0.0024305,K562@0.0179535,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0.198463, 0 0 0 0 ENSG00000229727.1 ENST00000450695.1 chr2:7561423-7562966 3 515 1024 intergenic -3.91 0 0,0,0 0 0,0,0 0 0 93.004 12.9941747572816 0 168.72 13.6466019417476 0 171.548 0 0 horse,human,macaque,marmoset,orangutan, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0.028025,H1HESC@0.0500895,HELAS3@0.006821,HEPG2@0.0155155,HMEC@0,HSMM@0,HUVEC@0.0024305,K562@0.0179535,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0.198463, 0 0 0 0 ENSG00000229727.1 ENST00000457568.1 chr2:7570054-7590045 3 476 19511 intergenic -2.44 0 0,0,0 0 0,0,0 0 10.6799753984932 0 0 6.38111834349854 0 0 10.1042488852442 0 1 1 chimp,human,macaque,marmoset,orangutan, lincRNA retained_intron A549@0,AG04450@0,BJ@0,GM12878@0.028025,H1HESC@0.0500895,HELAS3@0.006821,HEPG2@0.0155155,HMEC@0,HSMM@0,HUVEC@0.0024305,K562@0.0179535,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0.198463, 0 0 0 0 ENSG00000230515.1 ENST00000414654.1 chr2:7811735-7812377 2 467 173 intergenic 1.63 0 0,1,1 0 0,0,0 47.2826552462527 0 0 21.2462526766595 0 31.773 21.4817987152034 0 40.308 0 0 cat,chimp,cow,dog,elephant,human,marmoset,orangutan, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0.004998,H1HESC@0.22068,HELAS3@0,HEPG2@0,HMEC@0.026192,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0.049846,NHLF@0,SKNSHRA@0.031242, 0 0 0 0 ENSG00000235576.1 ENST00000417930.1 chr2:7865932-7870836 2 241 4661 intergenic -1.44 1 1,1,1 0 0,0,0 0 0 16.131 0 3.3080883930487 17.388 0 7.39004505470929 21.827 0 0 chimp,human,macaque,marmoset,orangutan, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@77.5456,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0.0191105,MCF7@0,NHEK@0.038031,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000226506.1 ENST00000416534.1 chr2:8026901-8039786 6 728 12147 intergenic 0.66 1 0,1,0 0 0,0,0 36.0769230769231 11.9140528525562 604.975 40.0480769230769 14.8475343706265 65.805 38.353021978022 17.1522186548119 76.567 0 0 chimp,human,macaque,marmoset,orangutan, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0.012774,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000226506.1 ENST00000416607.1 chr2:8029555-8037881 3 383 7939 intergenic -0.54 0 0,0,0 0 0,0,0 0 0 0 0 0 0 0 0.667338455724902 0 0 0 chimp,horse,human,macaque,marmoset,orangutan, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0.012774,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000235665.1 ENST00000426969.1 chr2:8062556-8119441 4 2232 54647 intergenic 2.33 1 0,0,0 0 0,0,0 0 33.3580068439256 0 0 30.3005654473256 0 5.10573476702509 33.6799641334383 0 0 0 chimp,human,macaque,marmoset,orangutan, lincRNA lincRNA A549@0,AG04450@0.008645,BJ@0,GM12878@0.124061,H1HESC@0.01261,HELAS3@0.001867,HEPG2@0.0022825,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0.0036055, 0 0 0 0 ENSG00000235665.1 ENST00000456681.1 chr2:8064285-8418214 4 742 353181 intergenic -2.75 0 0,0,0 0 0,0,0 0 16.8170541450418 154.128 0 14.3741849080217 68.988 0 17.5499219946713 63.574 0 0 chimp,human, lincRNA lincRNA A549@0,AG04450@0.008645,BJ@0,GM12878@0.124061,H1HESC@0.01261,HELAS3@0.001867,HEPG2@0.0022825,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0.0036055, 0 0 0 0 ENSG00000236790.1 ENST00000430192.1 chr2:8147901-8464760 8 1752 315093 intergenic 2.79 0 0,0,1 0 0,0,0 0 14.4535391138489 0 13.5776255707763 11.5516815670294 0 12.5422374429224 15.0279917357732 0 0 0 elephant, lincRNA lincRNA A549@0,AG04450@0,BJ@0.0163785,GM12878@2.03239,H1HESC@0.110017,HELAS3@0,HEPG2@0.018904,HMEC@0,HSMM@0.0113225,HUVEC@0,K562@0.0054845,MCF7@0.004622,NHEK@0,NHLF@0,SKNSHRA@0.0025825, 0 0 0 0 ENSG00000236790.1 ENST00000454043.1 chr2:8180064-8258454 3 588 77798 intergenic 2.21 0 0,0,0 0 0,0,0 0 7.52195429188411 0 0 6.18590452196714 0 0 7.76241034473894 0 0 0 chimp,cow,dog,elephant,human,macaque,marmoset,mouse,orangutan,panda,rat, lincRNA lincRNA A549@0,AG04450@0,BJ@0.0163785,GM12878@2.03239,H1HESC@0.110017,HELAS3@0,HEPG2@0.018904,HMEC@0,HSMM@0.0113225,HUVEC@0,K562@0.0054845,MCF7@0.004622,NHEK@0,NHLF@0,SKNSHRA@0.0025825, 0 0 0 0 ENSG00000229740.1 ENST00000442864.1 chr2:8279532-8283399 2 445 3420 intergenic -1.11 0 0,1,0 0 0,0,0 0 94.2733918128655 88.692 0 93.4809941520468 38.132 0 107.057602339181 49.766 0 0 chimp,cow,dog,horse,human,macaque,marmoset,orangutan,panda, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0.112057,HEPG2@1.47672,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000236790.1 ENST00000442956.1 chr2:8347273-8468549 10 2332 118926 intergenic -0.25 0 0,0,0 0 0,0,0 0 18.5290937221465 0 0.204974271012007 13.9556783209727 0 0.227272727272727 18.4858231168962 0 0 0 chimp,dog,human,marmoset,orangutan, lincRNA lincRNA A549@0,AG04450@0,BJ@0.0163785,GM12878@2.03239,H1HESC@0.110017,HELAS3@0,HEPG2@0.018904,HMEC@0,HSMM@0.0113225,HUVEC@0,K562@0.0054845,MCF7@0.004622,NHEK@0,NHLF@0,SKNSHRA@0.0025825, 0 0 0 0 ENSG00000236790.1 ENST00000444688.1 chr2:8452939-8523751 5 532 70272 intergenic 0 0 0,0,0 0 0,0,0 0 17.0823798952641 0 0 14.2776923952641 0 0 18.3546505009107 0 0 0 chimp,human,macaque,marmoset,orangutan, lincRNA lincRNA A549@0,AG04450@0,BJ@0.0163785,GM12878@2.03239,H1HESC@0.110017,HELAS3@0,HEPG2@0.018904,HMEC@0,HSMM@0.0113225,HUVEC@0,K562@0.0054845,MCF7@0.004622,NHEK@0,NHLF@0,SKNSHRA@0.0025825, 0 0 0 0 ENSG00000231435.1 ENST00000418358.1 chr2:8683722-8715631 3 1033 30872 intergenic 5.09 0 0,1,0 1 0,0,0 72.1926427879961 4.73620108836486 64.68 84.5992255566312 4.1061803576056 51.275 129.746369796709 5.27332210417207 57.433 0 0 chimp,cow,horse,human,macaque,marmoset,orangutan,panda,pig, lincRNA lincRNA A549@0,AG04450@0.0021635,BJ@0.0216675,GM12878@0.23004,H1HESC@0.0088055,HELAS3@0.000359,HEPG2@0.012377,HMEC@0,HSMM@0.0107255,HUVEC@0,K562@0.0022005,MCF7@0.0015475,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000236008.1 ENST00000454224.1 chr2:8699963-8723922 6 8833 15116 intergenic 4.86 1 0,1,0 1 0,0,0 1.70904562436318 17.5224927229426 0 2.2071776293445 13.9008997089177 1.104 5.6774595267746 16.1345594072506 1.112 0 0 chimp,human,orangutan, lincRNA lincRNA A549@0.006468,AG04450@0.0020395,BJ@0.006433,GM12878@0.853886,H1HESC@0.054341,HELAS3@0.050796,HEPG2@0.0471745,HMEC@0,HSMM@0.045287,HUVEC@0.000302,K562@0.0356005,MCF7@0.0338855,NHEK@0.000261,NHLF@0,SKNSHRA@0.0014275, 0 0 0 0 ENSG00000236008.1 ENST00000436187.1 chr2:8710461-8717085 2 294 6328 intergenic -6.81 1 0,0,1 0 0,0,0 0 16.2729140328698 2.926 0 13.076801517067 0 0 14.2653286978508 0 0 0 chimp,human,macaque,marmoset,orangutan, lincRNA lincRNA A549@0.006468,AG04450@0.0020395,BJ@0.006433,GM12878@0.853886,H1HESC@0.054341,HELAS3@0.050796,HEPG2@0.0471745,HMEC@0,HSMM@0.045287,HUVEC@0.000302,K562@0.0356005,MCF7@0.0338855,NHEK@0.000261,NHLF@0,SKNSHRA@0.0014275, 0 0 0 0 ENSG00000231083.1 ENST00000425678.1 chr2:8741022-8763072 3 562 21484 intergenic -14.44 0 0,1,0 0 0,0,0 0 5.39056972630795 0 0 4.54901321913983 0 0 7.12897970582759 0 0 0 cat,chimp,dog,elephant,horse,human,macaque,marmoset,panda,pig, lincRNA lincRNA A549@0.0665165,AG04450@0.0645305,BJ@0.053595,GM12878@0,H1HESC@0,HELAS3@0.0221635,HEPG2@0.202951,HMEC@0,HSMM@0.0339545,HUVEC@0,K562@0.009648,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000235092.1 ENST00000412712.1 chr2:8806766-8818464 4 949 10743 intergenic -2.66 1 0,0,1 0 0,0,0 23.072708113804 18.2819510378851 290.337 12.1928345626976 12.9934841292004 273.416 22.1696522655427 18.5130782835335 305.593 0 0 chimp,human,macaque,marmoset,orangutan, antisense antisense A549@2.19284,AG04450@0.225247,BJ@0.379267,GM12878@0.237862,H1HESC@0.16478,HELAS3@0.76418,HEPG2@1.41976,HMEC@0.010314,HSMM@0.20291,HUVEC@0.015643,K562@0.144124,MCF7@0.996954,NHEK@0.0812397,NHLF@0.072544,SKNSHRA@1.94243, 0 0 0 0 ENSG00000235092.1 ENST00000455965.1 chr2:8811114-8821993 4 790 10083 exonic 3.05 0 1,1,1 1 0,0,0 11.7113924050633 87.7342060894575 241.942 21.1316455696203 69.1253595160171 304.434 20.1417721518987 74.1872458593673 309.507 0 0 chimp,human,macaque,marmoset,orangutan, antisense antisense A549@2.19284,AG04450@0.225247,BJ@0.379267,GM12878@0.237862,H1HESC@0.16478,HELAS3@0.76418,HEPG2@1.41976,HMEC@0.010314,HSMM@0.20291,HUVEC@0.015643,K562@0.144124,MCF7@0.996954,NHEK@0.0812397,NHLF@0.072544,SKNSHRA@1.94243, 0 0 0 0 ENSG00000235092.1 ENST00000453900.1 chr2:8811375-8815896 4 515 4000 intergenic -10.10 0 0,0,0 0 0,0,0 0 0 17.752 0 0 0 0 0 1.215 0 0 chimp,dog,horse,human,macaque,marmoset,orangutan, antisense antisense A549@2.19284,AG04450@0.225247,BJ@0.379267,GM12878@0.237862,H1HESC@0.16478,HELAS3@0.76418,HEPG2@1.41976,HMEC@0.010314,HSMM@0.20291,HUVEC@0.015643,K562@0.144124,MCF7@0.996954,NHEK@0.0812397,NHLF@0.072544,SKNSHRA@1.94243, 0 0 0 0 ENSG00000235092.1 ENST00000433340.1 chr2:8817619-8818941 3 431 887 intergenic -4.13 0 1,1,1 0 0,0,0 112.696055684455 182.675310033822 274.272 75.7981438515081 101.279594137542 263.48 80.9651972157773 109.232243517475 290.622 0 0 chimp,human,macaque,marmoset,orangutan, antisense antisense A549@2.19284,AG04450@0.225247,BJ@0.379267,GM12878@0.237862,H1HESC@0.16478,HELAS3@0.76418,HEPG2@1.41976,HMEC@0.010314,HSMM@0.20291,HUVEC@0.015643,K562@0.144124,MCF7@0.996954,NHEK@0.0812397,NHLF@0.072544,SKNSHRA@1.94243, 0 0 0 0 ENSG00000235092.1 ENST00000433592.1 chr2:8817907-8818774 2 574 291 intergenic -0.19 0 0,1,1 0 0,0,0 99.3745644599303 126.048109965636 250.857 67.6289198606272 52.6254295532646 274.01 94.8031358885017 47.7938144329897 306.507 0 0 chimp,human,macaque,orangutan,panda, antisense antisense A549@2.19284,AG04450@0.225247,BJ@0.379267,GM12878@0.237862,H1HESC@0.16478,HELAS3@0.76418,HEPG2@1.41976,HMEC@0.010314,HSMM@0.20291,HUVEC@0.015643,K562@0.144124,MCF7@0.996954,NHEK@0.0812397,NHLF@0.072544,SKNSHRA@1.94243, 0 0 0 0 ENSG00000235092.1 ENST00000421298.1 chr2:8817984-8819186 2 450 750 exonic -4.13 0 0,1,0 0 0,0,0 69.1777777777778 285.2 299.262 52.3933333333333 262.322666666667 181.636 76.2733333333333 279.386666666667 168.282 0 0 chimp,horse,human,macaque,mouse,orangutan,panda, antisense antisense A549@2.19284,AG04450@0.225247,BJ@0.379267,GM12878@0.237862,H1HESC@0.16478,HELAS3@0.76418,HEPG2@1.41976,HMEC@0.010314,HSMM@0.20291,HUVEC@0.015643,K562@0.144124,MCF7@0.996954,NHEK@0.0812397,NHLF@0.072544,SKNSHRA@1.94243, 0 0 0 0 ENSG00000235092.1 ENST00000418957.1 chr2:8817999-8818983 2 529 453 exonic 4.54 0 0,1,0 0 0,0,0 150.003780718336 135.847682119205 278.556 120.837429111531 47.8189845474614 247.269 129.856332703214 57.6004415011038 263.511 0 0 chimp,human,macaque,orangutan,panda, antisense antisense A549@2.19284,AG04450@0.225247,BJ@0.379267,GM12878@0.237862,H1HESC@0.16478,HELAS3@0.76418,HEPG2@1.41976,HMEC@0.010314,HSMM@0.20291,HUVEC@0.015643,K562@0.144124,MCF7@0.996954,NHEK@0.0812397,NHLF@0.072544,SKNSHRA@1.94243, 0 0 0 0 ENSG00000242136.1 ENST00000495580.1 chr2:9243569-9244710 3 415 722 intergenic -1.45 0 0,1,0 0 0,0,0 0 0 0 0 0 0 5.85542168674699 0 0 0 0 chimp,elephant,human,marmoset,orangutan, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0.039448,HELAS3@0,HEPG2@0,HMEC@0.007486,HSMM@0,HUVEC@0,K562@0,MCF7@0.036883,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000242136.1 ENST00000463302.1 chr2:9244288-9245243 2 545 408 intergenic -0.78 0 0,0,0 0 0,0,0 0 0 0 0 0 0 0 0 2.43 0 0 chimp,cow,horse,human,macaque,marmoset,orangutan,panda, lincRNA retained_intron A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0.039448,HELAS3@0,HEPG2@0,HMEC@0.007486,HSMM@0,HUVEC@0,K562@0,MCF7@0.036883,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000244310.1 ENST00000492300.1 chr2:9255326-9257013 2 366 1319 intergenic -1.63 0 0,0,0 0 0,0,0 0 0 15.822 0 2.70659590598939 4.05 0 2.81273692191054 4.17 0 0 chimp,elephant,human,macaque,marmoset,orangutan, lincRNA lincRNA A549@0,AG04450@0,BJ@0.006576,GM12878@0,H1HESC@0.005637,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0.0111825,HUVEC@0,K562@0,MCF7@0.011174,NHEK@0.014318,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000240980.1 ENST00000474561.1 chr2:9283295-9286235 3 452 2484 intergenic -7.71 0 0,1,0 0 0,0,0 0 0 0 0 0 0 0 0 0 0 0 chimp,human,macaque,marmoset,orangutan, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0.011981,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000239300.1 ENST00000472619.1 chr2:9645574-9652541 2 260 6705 intronic -1.05 1 0,1,1 0 0,0,0 0 11.882475764355 91.996 0 14.9797166293811 108.588 0 14.6642803877703 134.691 0 0 cat,chimp,dog,human,macaque,marmoset,orangutan,panda, antisense antisense A549@0.01129,AG04450@0.0136945,BJ@0,GM12878@0.043758,H1HESC@0,HELAS3@0.0267615,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0.0138705, 0 0 0 0 ENSG00000239300.1 ENST00000480764.1 chr2:9645574-9652541 3 488 6475 intronic -1.05 1 0,1,1 0 0,0,0 0 12.304555984556 91.996 0 15.5118146718147 108.588 0 15.1851737451737 134.691 0 0 chimp,human,macaque,marmoset,orangutan, antisense antisense A549@0.01129,AG04450@0.0136945,BJ@0,GM12878@0.043758,H1HESC@0,HELAS3@0.0267615,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0.0138705, 0 0 0 0 ENSG00000240687.1 ENST00000478468.1 chr2:9778901-9789568 3 829 9834 intergenic 0.19 1 1,1,1 0 0,0,0 37.5645355850422 2.96115517592028 25.122 0 3.47386617856416 15.078 5.56936067551267 4.49196664632906 20.632 0 0 chimp,cow,human,macaque,marmoset,orangutan, lincRNA lincRNA A549@0.0476875,AG04450@0.17232,BJ@0,GM12878@0,H1HESC@0,HELAS3@0.022329,HEPG2@0,HMEC@0.019686,HSMM@0.002473,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0.042187,SKNSHRA@0.024562, 0 0 0 0 ENSG00000244260.1 ENST00000483023.1 chr2:9814152-9848542 5 1847 32535 intergenic 6.30 0 0,1,1 0 0,0,0 0 0 0 12.7054683270168 0.773505455663132 0 12.8115863562534 2.1541724296911 0 0 0 chimp,horse,human,macaque, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0.010696,HEPG2@0.0044185,HMEC@0,HSMM@0.0155745,HUVEC@0,K562@0,MCF7@0,NHEK@0.00142567,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000243491.1 ENST00000474667.1 chr2:9897625-9910470 2 1945 10898 intergenic 6.96 0 0,0,1 0 0,0,0 0 1.67250871719582 0 0 4.28408882363737 0 0 7.70884565975408 0 0 0 chimp,human,macaque,marmoset,orangutan, lincRNA lincRNA A549@0.016436,AG04450@0.009326,BJ@0,GM12878@0,H1HESC@0.002131,HELAS3@0,HEPG2@0.0044235,HMEC@0.07571,HSMM@0.005284,HUVEC@0,K562@0.0075685,MCF7@0,NHEK@0.022262,NHLF@0.0020045,SKNSHRA@0.0046695, 0 0 0 0 ENSG00000188525.3 ENST00000340444.1 chr2:10143286-10146158 2 2410 460 intergenic 6.26 0 0,0,0 0 0,0,0 0 0 0 0 0 0 17.248132780083 0 58.712 0 0 chimp,human,orangutan, antisense antisense A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0.0991825,HEPG2@0.081425,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0.00320933,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000234818.1 ENST00000414538.1 chr2:10729292-10744956 4 561 15097 exonic -5.33 0 0,1,1 0 0,0,0 178.463458110517 8.97781016095913 62.746 188.56862745098 15.6652977412731 57.01 223.985739750446 16.1329403192687 56.919 0 0 chimp,cow,dog,elephant,horse,human,macaque,marmoset,mouse,opossum,orangutan,panda,pig, antisense antisense A549@0.0862635,AG04450@0.0491945,BJ@0.012665,GM12878@0,H1HESC@0.0210395,HELAS3@0.0248195,HEPG2@0.007542,HMEC@0,HSMM@0,HUVEC@0,K562@0.021177,MCF7@0.007117,NHEK@0.0137107,NHLF@0.006907,SKNSHRA@0.0439085, 0 0 0 0 ENSG00000236162.1 ENST00000452909.1 chr2:10857899-10861078 5 563 2608 intergenic -5.80 0 0,0,0 0 0,0,0 2.59857904085258 12.8888036809816 8.36 0 10.3527607361963 26.511 0 11.4156441717791 31.744 0 0 chimp,cow,elephant,human,marmoset,orangutan, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0.008884,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0.0039945, 0 0 0 0 ENSG00000145063.9 ENST00000396164.1 chr2:11239977-11272302 9 1626 30683 intergenic 5.81 0 0,1,0 0 0,0,0 0 0.539712544405697 0 3.87453874538745 0.761952872926376 12.759 3.87453874538745 22.374278916664 12.905 0 0 chimp,human,macaque,marmoset,orangutan, lincRNA processed_transcript A549@0.0079995,AG04450@0,BJ@0,GM12878@0,H1HESC@0.0330155,HELAS3@0.010539,HEPG2@0.0073905,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0.008226,NHEK@0,NHLF@0,SKNSHRA@0.022326, 0 0 0 0 ENSG00000145063.9 ENST00000417697.2 chr2:11239977-11272302 7 1398 30915 intergenic 11.26 0 0,1,0 0 0,0,0 0 0.53566229985444 0 4.50643776824034 0.756234837457545 12.759 4.50643776824034 22.2063723111758 12.905 1 1 chimp,human,macaque,marmoset,orangutan, lincRNA processed_transcript A549@0.0079995,AG04450@0,BJ@0,GM12878@0,H1HESC@0.0330155,HELAS3@0.010539,HEPG2@0.0073905,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0.008226,NHEK@0,NHLF@0,SKNSHRA@0.022326, 0 0 0 0 ENSG00000145063.9 ENST00000536743.1 chr2:11245443-11272302 8 1414 25431 intergenic 5.81 0 0,1,0 0 0,0,0 0 0 0 4.45544554455446 0.197357555739059 12.759 4.45544554455446 1.66057174314813 12.905 1 1 chimp,human,macaque,marmoset,orangutan, lincRNA processed_transcript A549@0.0079995,AG04450@0,BJ@0,GM12878@0,H1HESC@0.0330155,HELAS3@0.010539,HEPG2@0.0073905,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0.008226,NHEK@0,NHLF@0,SKNSHRA@0.022326, 0 0 0 0 ENSG00000145063.9 ENST00000544306.1 chr2:11245443-11272347 5 1134 25762 intergenic 11.26 0 0,1,0 0 0,0,0 0 0 0 5.55555555555556 0.194821830603214 12.759 5.55555555555556 1.63923608415496 12.905 1 1 chimp,human,macaque,marmoset,orangutan, lincRNA processed_transcript A549@0.0079995,AG04450@0,BJ@0,GM12878@0,H1HESC@0.0330155,HELAS3@0.010539,HEPG2@0.0073905,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0.008226,NHEK@0,NHLF@0,SKNSHRA@0.022326, 0 0 0 0 ENSG00000145063.9 ENST00000447433.1 chr2:11264345-11272896 5 1467 7076 intergenic 3.10 0 0,0,0 0 0,0,0 0 0 0 4.29447852760736 0 27.68 4.29447852760736 0 33.563 0 0 chimp,human,macaque,marmoset, lincRNA processed_transcript A549@0.0079995,AG04450@0,BJ@0,GM12878@0,H1HESC@0.0330155,HELAS3@0.010539,HEPG2@0.0073905,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0.008226,NHEK@0,NHLF@0,SKNSHRA@0.022326, 0 0 0 0 ENSG00000230952.1 ENST00000430897.1 chr2:11497641-11505762 2 1059 7060 intergenic 1.51 0 0,0,0 0 0,0,0 0 1.40509915014164 0 2.93389990557129 1.32648725212465 0 3.08120868744098 2.00481586402266 0 0 0 chimp,cow,dog,elephant,horse,human,macaque,mouse,orangutan,panda, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@10.8957,HEPG2@31.1047,HMEC@0,HSMM@0.0038785,HUVEC@0.0050335,K562@0,MCF7@0,NHEK@0,NHLF@0.003637,SKNSHRA@0, 0 0 0 0 ENSG00000231403.1 ENST00000454489.1 chr2:11528149-11530493 3 623 1717 intergenic 3.52 0 0,0,0 0 0,0,0 0 20.677926616191 0 3.90048154093098 2.879440885265 0 4.01605136436597 2.91671520093186 0 0 0 chimp,dog,horse,human,macaque,marmoset,orangutan,panda, lincRNA lincRNA A549@0.010775,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0.0763125,HEPG2@0.0479315,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000224177.1 ENST00000417473.1 chr2:11534107-11542372 3 496 7765 intergenic -1.19 0 0,0,0 0 0,0,0 26.9838709677419 0.43090792015454 0 0 0 0 0 0 0 0 0 chimp,cow,dog,horse,human,marmoset,orangutan, lincRNA lincRNA A549@0.005637,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0.386405,HEPG2@0.0692235,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0.007777,SKNSHRA@0, 0 0 0 0 ENSG00000224177.1 ENST00000437795.1 chr2:11539128-11542234 4 486 2614 intergenic 4.28 0 0,0,1 0 0,0,0 0 0 0 0 0 0 0 0 0 0 0 chimp,human,marmoset,orangutan, lincRNA lincRNA A549@0.005637,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0.386405,HEPG2@0.0692235,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0.007777,SKNSHRA@0, 0 0 0 0 ENSG00000224177.1 ENST00000453100.1 chr2:11539180-11542384 2 397 2805 intergenic 4.39 0 0,0,0 0 0,0,0 0 0 0 0 0 0 0 0 0 0 0 chimp,horse,human,macaque,marmoset,orangutan, lincRNA lincRNA A549@0.005637,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0.386405,HEPG2@0.0692235,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0.007777,SKNSHRA@0, 0 0 0 0 ENSG00000224177.1 ENST00000432665.1 chr2:11539295-11542387 3 370 2718 intergenic 0.91 0 0,1,0 0 0,0,0 0 0 0 0 0 0 0 0 0 0 0 chimp,horse,human,macaque,marmoset,orangutan,panda, lincRNA lincRNA A549@0.005637,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0.386405,HEPG2@0.0692235,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0.007777,SKNSHRA@0, 0 0 0 0 ENSG00000228496.1 ENST00000455754.1 chr2:11821586-11823449 2 1057 804 intronic -1.34 1 1,1,1 1 0,0,0 0 0 0 0 6.17910447761194 6.511 0 9.68283582089552 6.798 0 0 chimp,elephant,human,macaque,marmoset,orangutan, sense_intronic sense_intronic A549@0.008527,AG04450@0.0513565,BJ@0,GM12878@0.132576,H1HESC@1.05505,HELAS3@0.282876,HEPG2@5.43772,HMEC@0,HSMM@0,HUVEC@0.254655,K562@0.094753,MCF7@0.009958,NHEK@0,NHLF@0.0062425,SKNSHRA@0.023423, 0 0 0 0 ENSG00000228496.1 ENST00000435175.1 chr2:11821587-11823454 2 1168 697 intronic -1.34 1 1,1,1 1 0,0,0 0 0 0 0 7.12769010043042 6.511 2.28852739726027 7.33428981348637 6.798 0 0 chimp,elephant,human,macaque,marmoset,orangutan, sense_intronic sense_intronic A549@0.008527,AG04450@0.0513565,BJ@0,GM12878@0.132576,H1HESC@1.05505,HELAS3@0.282876,HEPG2@5.43772,HMEC@0,HSMM@0,HUVEC@0.254655,K562@0.094753,MCF7@0.009958,NHEK@0,NHLF@0.0062425,SKNSHRA@0.023423, 0 0 0 0 ENSG00000203643.3 ENST00000430048.1 chr2:11861745-11864348 2 1603 998 intronic -0.63 1 0,1,0 0 0,0,0 0 0 0 0 0 5.016 0 0 5.976 0 0 chimp,human,macaque,orangutan, antisense antisense A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0.0017325, 0 0 0 0 ENSG00000230790.2 ENST00000431500.2 chr2:11881123-11885427 3 558 3742 intronic 2.30 0 0,1,1 0 0,0,0 0 5.46538358727613 0 0 7.95402298850575 0 0 7.93130179096498 0 0 0 chimp,human,macaque,marmoset,orangutan, antisense antisense A549@0.0605345,AG04450@0.021239,BJ@0,GM12878@0.096799,H1HESC@0.058437,HELAS3@0.185747,HEPG2@0.069925,HMEC@0,HSMM@0,HUVEC@0.004334,K562@0.230958,MCF7@0.018325,NHEK@0.0163637,NHLF@0.0533065,SKNSHRA@0.092124, 0 0 0 0 ENSG00000224184.1 ENST00000429878.1 chr2:11988748-12006410 2 556 17104 intergenic -1.36 1 0,0,1 0 0,0,0 0 9.96807764265669 0 0 4.7049812909261 0 0 8.13207436856876 0 0 0 chimp,human,orangutan, lincRNA lincRNA A549@0.0315195,AG04450@0.05857,BJ@0.084566,GM12878@5.13522,H1HESC@0.011121,HELAS3@0.049607,HEPG2@0.0478275,HMEC@0,HSMM@0.0358555,HUVEC@0.0902845,K562@0.201321,MCF7@0.0034785,NHEK@0,NHLF@0.0491095,SKNSHRA@0.0913685, 0 0 0 0 ENSG00000224184.1 ENST00000438292.1 chr2:12006011-12450085 5 437 443629 intergenic -2.61 0 0,0,0 0 0,0,0 10.2517162471396 11.2122584411749 0 5.25171624713959 10.493058388879 0 5.43020594965675 12.0250231612451 0 0 0 chimp,cow,elephant,horse,human,macaque,marmoset,orangutan,panda,pig,rabbit, lincRNA lincRNA A549@0.0315195,AG04450@0.05857,BJ@0.084566,GM12878@5.13522,H1HESC@0.011121,HELAS3@0.049607,HEPG2@0.0478275,HMEC@0,HSMM@0.0358555,HUVEC@0.0902845,K562@0.201321,MCF7@0.0034785,NHEK@0,NHLF@0.0491095,SKNSHRA@0.0913685, 0 0 0 0 ENSG00000224184.1 ENST00000451644.1 chr2:12147242-12271711 4 619 123844 intergenic -3.77 0 0,0,1 0 0,0,0 25.2407108239095 18.6360098188043 188.732 4.81744749596123 17.9764946222667 108.131 6.5718901453958 21.4288459675075 121.695 0 0 chimp,elephant,horse,human,macaque,marmoset,orangutan, lincRNA lincRNA A549@0.0315195,AG04450@0.05857,BJ@0.084566,GM12878@5.13522,H1HESC@0.011121,HELAS3@0.049607,HEPG2@0.0478275,HMEC@0,HSMM@0.0358555,HUVEC@0.0902845,K562@0.201321,MCF7@0.0034785,NHEK@0,NHLF@0.0491095,SKNSHRA@0.0913685, 0 0 0 0 ENSG00000224184.1 ENST00000412294.1 chr2:12147254-12718474 6 2177 569033 intergenic 0.72 0 0,0,0 0 0,0,0 39.8116674322462 10.7403366764318 183.764 23.026182820395 9.9324837048115 104.168 33.773082223243 11.6192101336829 117.447 0 0 cat,chimp,human,macaque,marmoset,mouse,orangutan, lincRNA lincRNA A549@0.0315195,AG04450@0.05857,BJ@0.084566,GM12878@5.13522,H1HESC@0.011121,HELAS3@0.049607,HEPG2@0.0478275,HMEC@0,HSMM@0.0358555,HUVEC@0.0902845,K562@0.201321,MCF7@0.0034785,NHEK@0,NHLF@0.0491095,SKNSHRA@0.0913685, 0 0 0 0 ENSG00000224184.1 ENST00000450916.1 chr2:12147300-12223744 3 318 76122 intergenic -1.44 0 0,0,1 0 0,0,0 0 20.5194950211503 168.032 0 18.9688000840756 92.269 0 24.5637397861328 105.686 0 0 chimp,human,macaque,orangutan, lincRNA lincRNA A549@0.0315195,AG04450@0.05857,BJ@0.084566,GM12878@5.13522,H1HESC@0.011121,HELAS3@0.049607,HEPG2@0.0478275,HMEC@0,HSMM@0.0358555,HUVEC@0.0902845,K562@0.201321,MCF7@0.0034785,NHEK@0,NHLF@0.0491095,SKNSHRA@0.0913685, 0 0 0 0 ENSG00000224184.1 ENST00000449986.1 chr2:12246710-12271674 3 475 24485 intergenic 3.48 0 1,1,1 0 0,0,0 32.8926315789474 19.0280988360221 0 6.27789473684211 18.5520522769042 0 8.56421052631579 19.6297733306106 0 0 0 chimp,dog,human,macaque,marmoset,pig, lincRNA lincRNA A549@0.0315195,AG04450@0.05857,BJ@0.084566,GM12878@5.13522,H1HESC@0.011121,HELAS3@0.049607,HEPG2@0.0478275,HMEC@0,HSMM@0.0358555,HUVEC@0.0902845,K562@0.201321,MCF7@0.0034785,NHEK@0,NHLF@0.0491095,SKNSHRA@0.0913685, 0 0 0 0 ENSG00000224184.1 ENST00000412606.1 chr2:12454443-12701391 4 574 246368 intergenic -0.61 0 0,0,0 0 0,0,0 1.56794425087108 9.67013573191324 160.38 10.3205574912892 8.59025522795168 86.635 10.4146341463415 10.286076113781 94.957 0 0 cat,chimp,horse,human,macaque,marmoset,orangutan,pig, lincRNA lincRNA A549@0.0315195,AG04450@0.05857,BJ@0.084566,GM12878@5.13522,H1HESC@0.011121,HELAS3@0.049607,HEPG2@0.0478275,HMEC@0,HSMM@0.0358555,HUVEC@0.0902845,K562@0.201321,MCF7@0.0034785,NHEK@0,NHLF@0.0491095,SKNSHRA@0.0913685, 0 0 0 0 ENSG00000223360.1 ENST00000414086.1 chr2:12739113-12745271 4 395 5757 intergenic 0 0 0,0,1 0 0,0,0 0 0 0 0 0.839847142608998 0 0 3.92600312662845 0 0 0 chimp,human,macaque,marmoset,orangutan, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0.0190375,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0.0204935,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000225649.1 ENST00000425974.1 chr2:13106910-13147138 6 1936 38282 intergenic 1.84 0 0,1,1 0 0,0,0 0 8.03333159187085 0 3.14514462809917 7.49869390313986 8.533 3.22572314049587 8.4069536596834 8.487 0 0 chimp,horse,human,macaque,marmoset,orangutan, lincRNA lincRNA A549@0,AG04450@0.006902,BJ@0.034196,GM12878@0,H1HESC@0.051417,HELAS3@0,HEPG2@0,HMEC@0.021085,HSMM@0.001174,HUVEC@0,K562@0.0325415,MCF7@0,NHEK@0.053155,NHLF@0.106244,SKNSHRA@0.218623, 0 0 0 0 ENSG00000225649.1 ENST00000421112.1 chr2:13141789-13147122 4 557 4770 intergenic -3.12 0 0,1,0 0 0,0,0 0 42.3511530398323 0 10.9317773788151 30.4566037735849 8.533 11.2118491921005 32.6270440251572 8.487 0 0 chimp,cow,elephant,guinea_pig,human,macaque,marmoset,orangutan, lincRNA lincRNA A549@0,AG04450@0.006902,BJ@0.034196,GM12878@0,H1HESC@0.051417,HELAS3@0,HEPG2@0,HMEC@0.021085,HSMM@0.001174,HUVEC@0,K562@0.0325415,MCF7@0,NHEK@0.053155,NHLF@0.106244,SKNSHRA@0.218623, 0 0 0 0 ENSG00000225649.1 ENST00000422996.1 chr2:13142762-13147138 3 579 3793 intergenic -3.12 0 0,1,1 0 0,0,0 85.4680483592401 40.0935934616399 0 32.0984455958549 33.2955444239388 8.533 49.2417962003454 33.3991563406275 8.487 0 0 chimp,human,macaque,marmoset,orangutan,rabbit, lincRNA lincRNA A549@0,AG04450@0.006902,BJ@0.034196,GM12878@0,H1HESC@0.051417,HELAS3@0,HEPG2@0,HMEC@0.021085,HSMM@0.001174,HUVEC@0,K562@0.0325415,MCF7@0,NHEK@0.053155,NHLF@0.106244,SKNSHRA@0.218623, 0 0 0 0 ENSG00000225649.1 ENST00000414661.1 chr2:13143356-13147125 2 849 2918 intergenic -0.87 0 0,1,0 0 0,0,0 30.2014134275618 10.8115147361206 0 19.4511189634865 5.10760795065113 8.533 20.2520612485277 6.72549691569568 8.487 0 0 cat,chimp,cow,dog,elephant,guinea_pig,horse,human,macaque,marmoset,orangutan,panda,pig,rat, lincRNA retained_intron A549@0,AG04450@0.006902,BJ@0.034196,GM12878@0,H1HESC@0.051417,HELAS3@0,HEPG2@0,HMEC@0.021085,HSMM@0.001174,HUVEC@0,K562@0.0325415,MCF7@0,NHEK@0.053155,NHLF@0.106244,SKNSHRA@0.218623, 0 0 0 0 ENSG00000229370.1 ENST00000434509.1 chr2:13677798-13749293 2 453 71040 intergenic 1.13 0 0,1,1 0 0,0,0 0 2.83869650900901 0 0 4.43652871621622 0 0 4.82560529279279 0 0 0 NA lincRNA lincRNA A549@0.04179,AG04450@0,BJ@0,GM12878@0.0116725,H1HESC@0,HELAS3@0.045869,HEPG2@0.23329,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0.005803,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000230448.1 ENST00000417751.1 chr2:13850656-14541087 5 591 689832 intergenic 2.85 0 0,0,1 0 0,0,0 2.09813874788494 4.1524762550882 0 0 4.92811438147259 37.048 0 5.8738533440026 49.096 0 0 cat,chimp,cow,elephant,horse,human,macaque,marmoset,orangutan,rabbit, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0.0080735,H1HESC@0.0016965,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0.0007645,MCF7@0.000587,NHEK@0,NHLF@0,SKNSHRA@0.0023815, 0 0 0 0 ENSG00000227718.1 ENST00000420828.1 chr2:13863173-13898277 3 829 34271 intergenic 1.60 0 0,0,1 0 0,0,0 0 0 0 0 0.0651279507455283 0 0 0.068016690496338 0 0 0 chimp,guinea_pig,human,macaque,marmoset,orangutan, lincRNA lincRNA A549@0.015289,AG04450@0.005388,BJ@0,GM12878@0,H1HESC@0,HELAS3@0.010034,HEPG2@0.0519665,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0.00949967,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000230448.1 ENST00000418420.1 chr2:14368998-14541082 4 3499 168579 intergenic 0.07 1 0,0,0 0 0,0,0 0 6.14182668066604 0 0 5.98001530439734 37.048 0 6.46403170027109 49.096 0 0 cat,chimp,cow,dog,elephant,guinea_pig,horse,human,macaque,marmoset,orangutan,panda,rabbit, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0.0080735,H1HESC@0.0016965,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0.0007645,MCF7@0.000587,NHEK@0,NHLF@0,SKNSHRA@0.0023815, 0 0 0 0 ENSG00000228505.1 ENST00000418481.1 chr2:14756552-14770316 2 262 13500 intergenic -0.76 0 0,0,0 0 0,0,0 0 0.745925925925926 0 5.83969465648855 5.15288888888889 0 6.06870229007634 5.48711111111111 1.944 0 0 chimp,horse,human,macaque,marmoset,orangutan, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000228505.1 ENST00000450715.1 chr2:14756552-14770316 3 343 13417 intergenic 1.49 0 0,0,0 0 0,0,0 0 0.750540359245733 0 4.46064139941691 5.18476559588582 0 4.63556851311953 5.52105537750615 1.944 0 0 chimp,human,macaque,marmoset,orangutan, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000235127.1 ENST00000416173.1 chr2:15026771-15047788 3 464 20549 intergenic -7.58 0 0,0,0 0 0,0,0 0 12.544357389654 0 0 16.6906418803835 1.785 0 17.2451700812692 3.757 0 0 chimp,human,macaque,marmoset,orangutan, lincRNA lincRNA A549@0.0144435,AG04450@0.0138095,BJ@0.010544,GM12878@0.005686,H1HESC@0.006232,HELAS3@0.008938,HEPG2@0.0125475,HMEC@0,HSMM@0,HUVEC@0,K562@0.016438,MCF7@0,NHEK@0.005654,NHLF@0,SKNSHRA@0.011519, 1 96 0 0 ENSG00000234022.1 ENST00000438178.1 chr2:15704294-15713992 4 405 9287 intergenic -1.91 0 0,0,1 0 0,0,0 0 16.0583611499946 26.471 5.90123456790123 6.99698503284161 0 6.19753086419753 8.38731560245505 0 0 0 chimp,elephant,human,macaque,marmoset,orangutan, antisense antisense A549@0.0106145,AG04450@0.0115165,BJ@0,GM12878@0.005731,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0.005031,HUVEC@0,K562@0.023364,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000224194.1 ENST00000431117.1 chr2:15808808-15820608 3 565 11231 intergenic 4.78 0 0,0,0 0 0,0,0 43.5398230088496 28.832873297124 0 92.587610619469 29.2926720683822 0 91.7221238938053 28.4759148784614 0 0 0 chimp,dog,human, antisense antisense A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000237326.1 ENST00000448379.1 chr2:15941871-15951001 2 485 8643 intergenic 6.40 0 0,1,0 0 0,0,0 0 63.2529214393151 0 0 65.8994562073354 0 0 65.046511627907 0 0 0 chimp,human,macaque,marmoset,orangutan, lincRNA lincRNA A549@0,AG04450@0.0132425,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000223850.1 ENST00000433810.1 chr2:16060521-16076139 3 1036 14578 intergenic -0.38 0 0,0,1 0 0,0,0 0 17.8654822335025 0 47.5559845559846 12.3280285361504 22.762 47.8832046332046 14.0238715873234 23.376 0 0 chimp,human,macaque,marmoset,orangutan, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0.0657515,H1HESC@0,HELAS3@0.0102175,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000233718.1 ENST00000453400.1 chr2:16061159-16081370 3 528 19679 intronic -3.53 0 0,0,0 0 0,0,0 153.780303030303 35.4336094313735 278.452 16.6856060606061 35.5419990853194 243.218 16.9034090909091 36.5316835205041 234.371 0 0 chimp,cow,human,macaque,mouse,orangutan,pig, lincRNA antisense A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0.614347,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0.006788,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000233718.1 ENST00000420452.1 chr2:16076387-16081704 4 1309 4002 intronic 1.44 1 0,0,0 0 0,0,0 35.9885408708938 120.274612693653 332.245 4.40030557677616 119.142178910545 399.338 4.49579831932773 117.783108445777 368 0 0 chimp,human,macaque,marmoset,orangutan, lincRNA antisense A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0.614347,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0.006788,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000233718.1 ENST00000419083.1 chr2:16080020-16081845 3 767 1054 intronic -1.62 1 0,1,0 0 0,0,0 252.396349413299 293.192599620493 297.09 165.037809647979 266.456356736243 397.155 166.380704041721 258.638519924099 383.012 0 0 chimp,elephant,horse,human,macaque,marmoset,orangutan,pig, lincRNA antisense A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0.614347,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0.006788,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000233718.1 ENST00000439180.1 chr2:16080243-16081360 2 494 621 intronic -3.53 0 0,0,1 0 0,0,0 361.540485829959 425.991948470209 273.062 127.603238866397 442.001610305958 236.468 137.03036437247 428.497584541063 227.231 0 0 cat,chimp,cow,elephant,guinea_pig,horse,human,macaque,marmoset,orangutan,panda,pig,rabbit, lincRNA antisense A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0.614347,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0.006788,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000233718.1 ENST00000448719.1 chr2:16080307-16082371 3 386 1674 exonic 0 0 0,0,1 0 0,0,0 509.836787564767 312.948028673835 95.388 325.028497409326 271.565710872162 230.333 346.919689119171 258.982078853047 220.106 0 0 cat,chimp,cow,elephant,guinea_pig,horse,human,macaque,marmoset,mouse,orangutan,panda,pig,rat, lincRNA antisense A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0.614347,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0.006788,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000226764.1 ENST00000422415.1 chr2:16137171-16203007 3 514 65318 intergenic 6.75 0 0,0,0 0 0,0,0 96.8482490272374 29.1569245843412 0 77.8988326848249 24.6960255978444 0 76.9727626459144 25.8248874735907 0 0 0 cat,chimp,cow,dog,elephant,horse,human,macaque,marmoset,orangutan,pig,rat, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000236289.2 ENST00000426539.1 chr2:16190549-16225923 4 1092 34276 intergenic -1.12 0 0,1,0 0 0,0,0 0 34.039327809546 0 34.753663003663 30.4536118566927 0 25.2783882783883 30.3528124635313 0.972 0 0 chimp,dog,elephant,human,macaque,marmoset,orangutan, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0.004395,HELAS3@0,HEPG2@0.033793,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000236289.2 ENST00000442387.2 chr2:16213520-16221239 3 469 7246 intergenic 1.94 1 0,0,0 0 0,0,0 0 0 21.988 0 0 0 0 0 0 0 0 chimp,human,macaque,marmoset,orangutan, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0.004395,HELAS3@0,HEPG2@0.033793,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000236989.1 ENST00000412381.1 chr2:16225344-16245963 4 638 19975 intergenic -2.03 0 0,0,0 0 0,0,0 0 3.71168961201502 178.205 0 8.3852816020025 154.113 0 9.31579474342929 152.773 0 0 chimp,human,macaque,marmoset,orangutan, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0.302123,HELAS3@0,HEPG2@0.0049955,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000236989.1 ENST00000428280.1 chr2:16236548-16245784 3 850 8382 intergenic -2.03 0 0,0,0 0 0,0,0 0 2.68730613218802 178.205 0 14.2298973991887 154.113 0 15.0373419231687 151.072 0 0 chimp,human,macaque,marmoset,orangutan, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0.302123,HELAS3@0,HEPG2@0.0049955,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000226041.1 ENST00000444804.1 chr2:16383698-16385494 3 634 1158 intergenic 1.78 0 0,1,1 0 0,0,0 0 0 0 0 0 0 0 0 0 0 0 chimp,dog,horse,human,macaque,marmoset,orangutan, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000228876.1 ENST00000420404.1 chr2:16405315-16410408 3 836 4253 intergenic -1.86 0 0,0,1 0 0,0,0 0 78.0648953679756 312.246 0 58.817540559605 213.566 0 56.3324711968023 209.896 0 0 cat,horse,human,marmoset,orangutan, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0.0876745,MCF7@0.0047925,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000231266.1 ENST00000439745.1 chr2:16408295-16409462 2 413 752 intergenic 0 0 0,1,1 0 0,0,0 424.067796610169 106.396276595745 0 393.554479418886 67.5039893617021 0 352.108958837772 68.4547872340426 0 0 0 horse,human,macaque,marmoset,orangutan,panda, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0.0140255,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000232444.1 ENST00000420130.1 chr2:16497592-16500834 2 738 2502 intergenic -3.66 0 0,0,0 0 0,0,0 1.65853658536585 24.1342925659472 12.98 26.260162601626 32.5483613109512 87.942 30.2425474254743 31.8233413269384 91.603 0 0 cat,chimp,cow,dog,elephant,horse,human,macaque,marmoset,mouse,orangutan,panda,pig,rat, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000224400.1 ENST00000425176.1 chr2:16535524-16613970 3 314 78128 intergenic 2.32 0 0,0,0 0 0,0,0 0 31.1000793569527 0 0 27.238045259062 0 0 27.5250870366578 0 0 0 chimp,horse,human,macaque,marmoset,orangutan,panda, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000224400.1 ENST00000427950.1 chr2:16536453-16613970 4 428 77083 intergenic 2.32 0 0,0,0 0 0,0,0 0 31.3516209799826 13.11 0 27.418743432404 14.535 0 27.6971057172139 15.504 0 0 chimp,horse,human,macaque,marmoset,orangutan,panda, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000237633.1 ENST00000446357.1 chr2:16704444-16710655 3 543 5664 intergenic 1.47 0 0,0,0 0 0,0,0 0 6.31673728813559 365.4 0 4.86387711864407 365.337 0 5.36952683615819 370.441 0 0 NA antisense antisense A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000237633.1 ENST00000443066.1 chr2:16704458-16710706 3 542 5702 intergenic 1.47 0 0,0,0 0 0,0,0 0 6.2746404770256 365.4 0 4.83146264468607 365.337 0 5.33374254647492 370.441 0 0 NA antisense antisense A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000223536.1 ENST00000423925.1 chr2:16909391-16948676 3 561 38720 intergenic -4.47 0 0,0,0 0 0,0,0 0 6.04313016528926 0 0 5.23685433884298 0 0 5.77352789256198 6.475 0 0 cat,chimp,human,macaque,marmoset,orangutan, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0.0237135,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000223536.1 ENST00000448650.1 chr2:16909391-16948822 2 594 38835 intergenic -4.47 0 0,0,0 0 0,0,0 0 6.02523496845629 0 0 5.22134672331659 0 0 5.75643105446118 6.475 0 0 cat,chimp,elephant,horse,human,macaque,marmoset,orangutan,panda, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0.0237135,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000256965.1 ENST00000545594.1 chr2:16973247-16978722 3 837 4634 intergenic 3.22 0 0,0,0 0 0,0,0 0 0 0 0 0 1.84 0 0 1.944 0 0 NA lincRNA lincRNA A549@0.002584,AG04450@0,BJ@0,GM12878@0,H1HESC@0.137931,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0.00303933,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000237670.1 ENST00000421181.1 chr2:17151301-17155764 3 198 4261 intergenic 0.52 0 0,0,0 0 0,0,0 0 0 0 0 1.07721192208402 0 0 1.17437221309552 0 0 0 chimp,human,macaque,orangutan, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0.0883955,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000224626.1 ENST00000431697.1 chr2:18966073-18969018 2 366 2577 intergenic -1.98 0 0,0,0 0 0,0,0 0 0 0 5.22404371584699 0 0 5.48633879781421 0 0 0 0 chimp,human,macaque,marmoset,orangutan, lincRNA lincRNA A549@0.015941,AG04450@0,BJ@0.03889,GM12878@0.0582275,H1HESC@0.096907,HELAS3@0.117867,HEPG2@0.0254535,HMEC@0.022253,HSMM@0,HUVEC@0,K562@0.013585,MCF7@0,NHEK@0.300984,NHLF@0.0052435,SKNSHRA@0.0998845, 0 0 0 0 ENSG00000236204.1 ENST00000424895.1 chr2:19167729-19226726 4 1945 57046 intergenic -1.64 0 0,1,0 0 0,0,0 93.2457583547558 21.6075097289906 266.407 165.07146529563 28.7310416155383 337.418 134.844215938303 29.1762086737019 331.182 0 0 chimp,cow,dog,guinea_pig,horse,human,macaque,mouse,opossum,orangutan,pig,rabbit, lincRNA lincRNA A549@0.813257,AG04450@0.254542,BJ@0.122775,GM12878@0.156602,H1HESC@0.155446,HELAS3@0.0298895,HEPG2@0.132421,HMEC@0.02586,HSMM@0.134911,HUVEC@0.0333725,K562@0.0637005,MCF7@0.508873,NHEK@0.083205,NHLF@0.188765,SKNSHRA@0.471554, 0 0 0 0 ENSG00000236204.1 ENST00000432142.1 chr2:19203707-19505815 5 566 301534 intergenic 2.65 0 0,0,0 0 0,0,0 58.1201413427562 26.0044306778009 0 70.9717314487633 28.6554318915943 0 69.8374558303887 29.70641785006 0 0 0 chimp,cow,dog,guinea_pig,human,macaque,marmoset,orangutan,pig, lincRNA lincRNA A549@0.813257,AG04450@0.254542,BJ@0.122775,GM12878@0.156602,H1HESC@0.155446,HELAS3@0.0298895,HEPG2@0.132421,HMEC@0.02586,HSMM@0.134911,HUVEC@0.0333725,K562@0.0637005,MCF7@0.508873,NHEK@0.083205,NHLF@0.188765,SKNSHRA@0.471554, 0 0 0 0 ENSG00000236204.1 ENST00000418165.1 chr2:19226415-19505798 5 548 278827 intergenic 2.65 0 0,0,1 0 0,0,0 42.2080291970803 27.2554487190982 0 50.7664233576642 28.9521029168625 0 49.8375912408759 30.0912967539012 0 0 0 chimp,horse,human,macaque,marmoset,orangutan,pig, lincRNA lincRNA A549@0.813257,AG04450@0.254542,BJ@0.122775,GM12878@0.156602,H1HESC@0.155446,HELAS3@0.0298895,HEPG2@0.132421,HMEC@0.02586,HSMM@0.134911,HUVEC@0.0333725,K562@0.0637005,MCF7@0.508873,NHEK@0.083205,NHLF@0.188765,SKNSHRA@0.471554, 0 0 0 0 ENSG00000236204.1 ENST00000449124.1 chr2:19244622-19546509 5 621 301258 intergenic -1.42 0 0,0,0 0 0,0,0 0 25.169426206109 0 0 25.2822962377763 0 0 26.3537399836684 0 0 0 chimp,cow,dog,elephant,horse,human,macaque,marmoset,orangutan, lincRNA lincRNA A549@0.813257,AG04450@0.254542,BJ@0.122775,GM12878@0.156602,H1HESC@0.155446,HELAS3@0.0298895,HEPG2@0.132421,HMEC@0.02586,HSMM@0.134911,HUVEC@0.0333725,K562@0.0637005,MCF7@0.508873,NHEK@0.083205,NHLF@0.188765,SKNSHRA@0.471554, 0 0 0 0 ENSG00000234597.1 ENST00000443897.1 chr2:19657981-19668722 2 1707 9032 intergenic 2.38 1 0,0,0 0 0,0,0 5.47451669595782 62.8683569530558 0 16.4827182190978 69.903454384411 0 20.2671353251318 70.7794508414526 0 0 0 chimp,horse,human,macaque,orangutan,pig, lincRNA lincRNA A549@0.0036325,AG04450@0.0034645,BJ@0,GM12878@0.009323,H1HESC@0.003478,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0.002408,HUVEC@0.00625,K562@0,MCF7@0.0048125,NHEK@0.00683967,NHLF@0.004567,SKNSHRA@0, 0 0 0 0 ENSG00000237992.1 ENST00000450628.1 chr2:19675211-19688611 3 751 12645 intergenic -3.01 0 0,0,0 0 0,0,0 0 51.3961249505734 10.516 5.95339547270306 66.3607750098853 0 16.8988015978695 59.8007908264136 0 0 0 cat,chimp,cow,dog,horse,human,macaque,marmoset,orangutan,panda,pig,rabbit, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000235911.1 ENST00000432822.1 chr2:19911476-19917337 2 441 5418 intergenic 7.71 0 0,0,1 0 0,0,0 0 9.46973052787006 16.1 13.4761904761905 9.06478405315615 22.505 14.2607709750567 10.5555555555556 21.444 0 0 cat,chimp,elephant,human,macaque,orangutan, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000228784.1 ENST00000438692.1 chr2:20068621-20077154 5 2234 6291 intergenic 11.96 0 0,1,1 0 0,0,0 0 0 0 0 0.303926243840407 2.232 32.6938227394808 4.48799872834208 5.845 0 0 chimp,elephant,human,macaque,marmoset, lincRNA processed_transcript A549@0.0338455,AG04450@0.08359,BJ@0.129612,GM12878@0.139295,H1HESC@0.639042,HELAS3@0.0167245,HEPG2@0.0705375,HMEC@0,HSMM@0.014019,HUVEC@0.111212,K562@0.0388655,MCF7@0.192404,NHEK@0.009096,NHLF@0.214705,SKNSHRA@0.0020285, 0 0 0 0 ENSG00000228784.1 ENST00000449086.1 chr2:20068635-20084808 10 2985 13170 intergenic 12.74 0 0,1,1 0 0,0,0 0 0.97798025816249 0 0 1.24312832194381 2.232 28.785594639866 7.82581624905087 5.845 0 0 elephant,human,macaque, lincRNA processed_transcript A549@0.0338455,AG04450@0.08359,BJ@0.129612,GM12878@0.139295,H1HESC@0.639042,HELAS3@0.0167245,HEPG2@0.0705375,HMEC@0,HSMM@0.014019,HUVEC@0.111212,K562@0.0388655,MCF7@0.192404,NHEK@0.009096,NHLF@0.214705,SKNSHRA@0.0020285, 0 0 0 0 ENSG00000228784.1 ENST00000456119.1 chr2:20068652-20072291 5 517 3114 intergenic 5.61 0 0,1,0 0 0,0,0 0 0 0 0 0.614001284521516 2.232 20.9110251450677 1.10597302504817 5.845 0 0 chimp,elephant,human,macaque,marmoset,orangutan, lincRNA processed_transcript A549@0.0338455,AG04450@0.08359,BJ@0.129612,GM12878@0.139295,H1HESC@0.639042,HELAS3@0.0167245,HEPG2@0.0705375,HMEC@0,HSMM@0.014019,HUVEC@0.111212,K562@0.0388655,MCF7@0.192404,NHEK@0.009096,NHLF@0.214705,SKNSHRA@0.0020285, 0 0 0 0 ENSG00000228784.1 ENST00000433669.1 chr2:20068652-20077296 6 2466 6168 intergenic 12.54 0 0,1,0 0 0,0,0 0 0 0 0 0.309987029831388 2.232 31.8077858880779 3.65337224383917 5.845 0 0 chimp,elephant,human,macaque, lincRNA processed_transcript A549@0.0338455,AG04450@0.08359,BJ@0.129612,GM12878@0.139295,H1HESC@0.639042,HELAS3@0.0167245,HEPG2@0.0705375,HMEC@0,HSMM@0.014019,HUVEC@0.111212,K562@0.0388655,MCF7@0.192404,NHEK@0.009096,NHLF@0.214705,SKNSHRA@0.0020285, 0 0 0 0 ENSG00000227210.1 ENST00000416575.1 chr2:20189978-20203971 3 538 13451 intronic -3.32 0 0,1,0 0 0,0,0 143.066914498141 30.1350828934652 47.396 108.618959107807 28.1764181101777 576.41 129.014869888476 31.6325180283994 89.835 0 0 chimp,human,macaque,marmoset,orangutan, antisense antisense A549@0.289848,AG04450@0.0670405,BJ@0.099137,GM12878@0.044176,H1HESC@0.256641,HELAS3@0.450041,HEPG2@0.318788,HMEC@0.083255,HSMM@0.037512,HUVEC@0.0670555,K562@0.004292,MCF7@0.120299,NHEK@0.0893373,NHLF@0.0252065,SKNSHRA@1.11109, 0 0 0 0 ENSG00000223734.2 ENST00000452342.2 chr2:20251895-20254257 2 571 1789 intergenic 2.67 0 1,1,1 0 0,0,0 0 7.99329234209055 47.069 0 3.68921185019564 96.82 0 3.73840134153158 92.373 0 0 chimp,human,macaque,marmoset,orangutan,pig, antisense antisense A549@0.140408,AG04450@0.0663635,BJ@0.023965,GM12878@0.0872425,H1HESC@0.124745,HELAS3@0.188975,HEPG2@0.0523085,HMEC@0.028584,HSMM@0.026686,HUVEC@0.0084865,K562@0.0537735,MCF7@0.119754,NHEK@0.004608,NHLF@0.0068105,SKNSHRA@0.205812, 0 0 0 0 ENSG00000234378.1 ENST00000430429.1 chr2:20263617-20306590 2 744 42227 intergenic 3.25 0 0,1,0 0 0,0,0 0 2.73166457479811 0 0 2.68584081275014 2.232 0 3.30861770904871 2.331 0 0 chimp,human,macaque,marmoset,orangutan, lincRNA lincRNA A549@0.073065,AG04450@0.0218825,BJ@0,GM12878@0,H1HESC@0.0055615,HELAS3@0.17905,HEPG2@0.506289,HMEC@0.005489,HSMM@0,HUVEC@0,K562@0,MCF7@0.01078,NHEK@0.00696167,NHLF@0.0077595,SKNSHRA@0.015233, 0 0 0 0 ENSG00000228950.1 ENST00000448241.1 chr2:20650803-20652708 2 306 1597 intergenic 0 0 0,1,0 0 0,0,0 151.803921568627 50.0613650594865 150.412 157.411764705882 44.5278647463995 52.002 154.421568627451 44.3644333124609 59.817 0 0 cat,chimp,cow,dog,horse,human,macaque,marmoset,orangutan,panda,pig, lincRNA lincRNA A549@0.0970975,AG04450@0.051489,BJ@0.023233,GM12878@0,H1HESC@0.0667425,HELAS3@1.4824,HEPG2@0.183054,HMEC@0,HSMM@0.061838,HUVEC@0.265764,K562@0,MCF7@0.13768,NHEK@0,NHLF@0,SKNSHRA@0.0611295, 0 0 0 0 ENSG00000231948.2 ENST00000449391.2 chr2:20790535-20792308 2 598 1173 intergenic -3.59 1 1,1,1 0 0,1,0 0 0 0 0 0 0 0 0 0 0 0 chimp,human,macaque,marmoset,orangutan,panda, sense_intronic sense_intronic A549@0.0167185,AG04450@0.0428885,BJ@0.0037685,GM12878@0.019846,H1HESC@0,HELAS3@3.4717,HEPG2@11.5,HMEC@0.034254,HSMM@0.070919,HUVEC@0.063977,K562@0.153385,MCF7@0.041338,NHEK@0.0942893,NHLF@0.0596095,SKNSHRA@0.206524, 0 0 0 0 ENSG00000236436.1 ENST00000447260.1 chr2:21059531-21061421 2 1496 392 intergenic 3.77 1 0,0,1 0 0,0,0 0 0 0 6.40641711229947 0 1.195 32.5982620320856 0 1.255 0 0 cat,chimp,cow,elephant,horse,human,macaque,marmoset,orangutan,panda,rat, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000233005.1 ENST00000435237.1 chr2:21444047-22193831 6 482 749292 intergenic 3.38 0 0,1,0 0 0,0,0 6.04771784232365 33.4467897695425 43.95 8.09958506224066 34.514664509964 89.318 8.11618257261411 35.6865080636121 100.356 0 0 chimp,cow,dog,elephant,horse,human,marmoset,orangutan,pig, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0.0047895,HEPG2@0.090544,HMEC@0.008124,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0.469101,NHLF@0,SKNSHRA@0.014124, 0 0 0 0 ENSG00000233005.1 ENST00000457901.1 chr2:21444057-21486958 2 502 42397 intergenic 1.19 1 1,1,1 0 0,0,0 0 28.5360049060075 43.95 0 25.4417529542185 89.318 0 28.5812911290893 100.356 0 0 chimp,human,macaque,marmoset,orangutan, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0.0047895,HEPG2@0.090544,HMEC@0.008124,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0.469101,NHLF@0,SKNSHRA@0.014124, 0 0 0 0 ENSG00000231204.1 ENST00000451476.1 chr2:21540532-21784185 5 489 243156 intergenic 3.79 0 0,0,0 0 0,0,0 0 31.5795826547566 0 0 31.6353739985853 0 0 33.6652683873727 0 0 0 chimp,cow,human,macaque,marmoset,orangutan, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0.028688,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0.0357925, 0 0 0 0 ENSG00000231204.1 ENST00000451511.1 chr2:21618948-21626046 2 377 6719 intergenic -1.71 1 0,1,1 0 0,0,0 0 9.08959666617056 0 0 4.67703527310612 0 0 6.11817234707546 0 0 0 chimp,human,macaque,marmoset, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0.028688,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0.0357925, 0 0 0 0 ENSG00000231204.1 ENST00000417609.1 chr2:21619455-21626046 2 580 6009 intergenic 3.24 1 0,0,1 0 0,0,0 0 10.1635879514062 0 0 5.22965551672491 0 0 6.84107172574472 0 0 0 chimp,human,macaque,marmoset,orangutan, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0.028688,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0.0357925, 0 0 0 0 ENSG00000235537.1 ENST00000458359.1 chr2:21853420-21859181 3 536 5221 intergenic -0.57 0 0,0,0 0 0,0,0 0 57.8109557556024 0 0 48.2371193257997 0 0 57.6786056311051 0 0 0 cat,chimp,cow,dog,guinea_pig,horse,human,macaque,marmoset,orangutan,panda, lincRNA lincRNA A549@0.0080545,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0.040486,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000228538.1 ENST00000416032.1 chr2:21861303-21872374 3 371 10696 intergenic 2.45 0 0,0,0 0 0,0,0 0 58.0091623036649 92.382 0 54.3973448017951 128.138 0 58.3308713537771 128.927 0 0 chimp,human,macaque,marmoset,orangutan,panda,rabbit, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000228538.1 ENST00000412424.1 chr2:21861303-21872435 3 545 10583 intergenic 2.45 0 0,0,0 0 0,0,0 0 58.628555230086 124.956 0 54.9781725408674 172.485 0 58.9536993291127 172.115 0 0 chimp,human,macaque,marmoset,orangutan,rabbit, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000229621.1 ENST00000435682.1 chr2:21910306-21933495 3 2095 21090 intergenic 3.75 0 0,0,0 0 0,0,0 60.5560859188544 16.7800853485064 0 77.5150357995227 19.6606922712186 0 68.7775656324582 20.7938833570413 0 0 0 cat,chimp,cow,dog,elephant,human,macaque,marmoset,orangutan,panda,pig,rat, lincRNA lincRNA A549@0.0041385,AG04450@0,BJ@0,GM12878@0.009516,H1HESC@0,HELAS3@0.010186,HEPG2@0.0082685,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0.00098,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000231200.1 ENST00000450551.1 chr2:22156208-22753977 5 631 597130 intergenic -4.42 1 0,0,1 0 0,0,0 86.9255150554675 22.6520673890108 0 55.1854199683043 27.3461808986318 0 60.1473851030111 27.8939611139953 0 0 0 cat,chimp,cow,dog,elephant,guinea_pig,horse,human,macaque,marmoset,orangutan,panda,pig,rabbit,rat, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000228999.1 ENST00000430520.1 chr2:22167481-22188423 2 577 20363 intergenic -5.14 0 0,1,0 0 0,0,0 141.811091854419 33.4028875902372 45.506 147.431542461005 31.4232676914011 109.564 170.409012131716 33.0187595148063 103.443 0 0 cat,chimp,elephant,guinea_pig,horse,human,macaque,marmoset,mouse,orangutan,panda,rabbit,rat, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0.00368,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000234207.1 ENST00000419013.1 chr2:22600466-22704876 4 565 103839 intergenic -0.38 0 0,0,0 0 0,0,0 116.207079646018 22.1599399069714 163.938 127.638938053097 28.3963828619305 206.973 136.281415929204 28.4166449985073 200.297 0 0 cat,chimp,cow,dog,elephant,guinea_pig,horse,human,macaque,marmoset,mouse,orangutan,rabbit,rat, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000233587.1 ENST00000433429.1 chr2:22759351-22761160 3 437 1368 intergenic -9.40 0 0,0,0 0 0,0,0 0 39.3172514619883 0 3.82837528604119 68.6761695906433 0 4.02059496567506 82.5350877192982 0 0 0 chimp,cow,horse,human,macaque,marmoset,orangutan,rabbit, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000232451.1 ENST00000421581.1 chr2:23240997-23313708 7 710 71989 intergenic -0.74 0 0,0,1 0 0,0,0 0 31.0639542152273 0 0 37.2734584450402 2.976 1.43661971830986 38.2889885954799 3.108 0 0 chimp,dog,elephant,guinea_pig,horse,human,macaque,marmoset,orangutan,rabbit, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0.025155,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000232451.1 ENST00000432612.1 chr2:23249981-23253293 3 530 2778 intergenic 0.92 1 0,0,0 0 0,0,0 0 18.2591792656587 54.311 0 20.008279337653 130.518 0 20.1796256299496 132.136 0 0 chimp,cow,horse,human,macaque,marmoset,orangutan,pig, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0.025155,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000232451.1 ENST00000440785.1 chr2:23253475-23421927 4 502 167944 intergenic 0 0 0,0,0 0 0,0,0 101.717131474104 31.4028723860334 0 58.4900398406375 37.733012194541 13.212 62.304780876494 39.243081027009 13.633 0 0 cat,chimp,dog,elephant,guinea_pig,horse,human,macaque,marmoset,orangutan,panda,pig,rabbit,rat, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0.025155,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000223530.1 ENST00000423706.1 chr2:23553535-23554915 4 521 853 intergenic -5.62 0 0,1,0 0 0,0,0 18.3109404990403 0 0 55.021113243762 2.80187573270809 27.916 54.232245681382 8.02344665885111 29.799 0 0 cat,chimp,elephant,guinea_pig,horse,human,macaque,marmoset,mouse,orangutan,panda,pig,rabbit, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0.0056605,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0.0103835,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000233714.1 ENST00000415245.1 chr2:23570525-23574735 2 890 3318 intergenic 3.49 0 0,0,0 0 0,0,0 8.15730337078652 46.957805907173 0 9.35505617977528 28.2763713080169 0 9.45955056179775 30.5892103676914 0 0 0 cat,chimp,dog,elephant,guinea_pig,human,macaque,marmoset,orangutan,panda,pig, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0.022879,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000223634.1 ENST00000426527.1 chr2:23580387-23583247 2 531 2327 intergenic 2.54 0 0,0,0 0 0,0,0 0 0 0 0 3.50752041254835 43.389 0 4.4172754619682 50.87 0 0 chimp,dog,elephant,horse,human,macaque,marmoset,orangutan,rabbit, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0.057849,HELAS3@0.0099585,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0.0055835,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0.023838, 0 0 0 0 ENSG00000235497.1 ENST00000421563.1 chr2:23598100-23604170 4 537 5527 intergenic 2.71 0 0,0,1 0 0,0,0 0 25.7298715397141 59.609 8.77094972067039 27.2212773656595 51.314 8.74301675977654 29.1429346842772 55.728 0 0 NA lincRNA lincRNA A549@0,AG04450@0.004353,BJ@0.004473,GM12878@0,H1HESC@0.010759,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0.0037165,NHEK@0,NHLF@0,SKNSHRA@0.004194, 0 0 0 0 ENSG00000235497.1 ENST00000430051.1 chr2:23598235-23604126 6 566 5315 intergenic 2.15 0 0,0,0 0 0,0,0 0 26.7561618062088 59.609 13.8109540636042 27.677516462841 51.314 14.243816254417 29.6231420507996 55.728 0 0 chimp,human,macaque,marmoset,orangutan, lincRNA lincRNA A549@0,AG04450@0.004353,BJ@0.004473,GM12878@0,H1HESC@0.010759,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0.0037165,NHEK@0,NHLF@0,SKNSHRA@0.004194, 0 0 0 0 ENSG00000232642.1 ENST00000428344.1 chr2:24388753-24397652 4 788 8105 intronic 1.77 0 0,0,0 0 0,0,0 0 4.60727945712523 0 0 0 6.042 0 4.77717458359038 7.556 0 0 chimp,human,macaque,marmoset,orangutan, antisense antisense A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000232642.1 ENST00000438414.1 chr2:24392818-24397874 2 672 4382 intergenic 1.77 0 0,1,0 0 0,0,0 0 2.86170698311273 0 0 0 6.042 0 7.78229119123688 7.556 0 0 chimp,human,macaque,marmoset,orangutan, antisense antisense A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000223754.1 ENST00000429717.1 chr2:24422708-24424567 2 541 1316 intronic 5.75 0 0,0,1 0 0,0,0 0 0 0 0 4.67629179331307 0 0 34.491641337386 0 0 0 chimp,dog,horse,human,macaque,marmoset,orangutan,panda, antisense antisense A549@0.005087,AG04450@0.0168425,BJ@0.013602,GM12878@0.111118,H1HESC@0,HELAS3@0.015374,HEPG2@0.115314,HMEC@0,HSMM@0,HUVEC@0.127379,K562@0.0197225,MCF7@0.007405,NHEK@0.0125353,NHLF@0,SKNSHRA@0.087138, 0 0 0 0 ENSG00000242628.1 ENST00000413254.1 chr2:24437250-24439163 2 238 1673 exonic 9.25 0 0,0,1 0 0,0,0 253.142857142857 15.8876270173341 0 216.861344537815 12.3610280932457 0 244.823529411765 15.2181709503885 0 0 0 cat,chimp,cow,dog,elephant,guinea_pig,horse,human,macaque,marmoset,mouse,orangutan,panda,pig,rabbit,rat, antisense antisense A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0.003056,NHLF@0,SKNSHRA@0.060418, 0 0 0 0 ENSG00000242628.1 ENST00000413989.1 chr2:24437250-24444375 2 230 6893 intronic 0 0 0,0,1 0 0,0,0 0 25.9856376033657 0 0 25.6930219062817 0 0 26.7411867111562 0 0 0 chimp,dog,elephant,horse,human,macaque,marmoset,orangutan, antisense antisense A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0.003056,NHLF@0,SKNSHRA@0.060418, 0 0 0 0 ENSG00000242628.1 ENST00000430105.1 chr2:24437250-24444385 3 429 6702 exonic 5.98 0 0,0,1 0 0,0,0 21.986013986014 25.2602208296031 0 12.006993006993 25.5975828111012 0 15.5291375291375 26.4385258131901 0 0 0 chimp,dog,elephant,horse,human,macaque,marmoset,orangutan, antisense antisense A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0.003056,NHLF@0,SKNSHRA@0.060418, 0 0 0 0 ENSG00000224165.1 ENST00000421904.1 chr2:25194259-25195691 2 458 972 exonic 0.06 1 0,0,1 0 0,0,0 0 120.724279835391 0 3.53711790393013 101.398148148148 0 3.56331877729258 88.8559670781893 0 0 0 chimp,cow,dog,elephant,human,macaque,marmoset,orangutan,panda,pig,rat, lincRNA processed_transcript A549@0.574588,AG04450@0.217655,BJ@0.34992,GM12878@0.212098,H1HESC@0.0214175,HELAS3@0.344342,HEPG2@0.573536,HMEC@0.02256,HSMM@0.0631625,HUVEC@0.009029,K562@0.13712,MCF7@0.24687,NHEK@0.0956113,NHLF@0.0484365,SKNSHRA@1.95383, 0 0 0 0 ENSG00000224165.1 ENST00000451291.1 chr2:25194311-25258619 5 483 63817 intronic 0.79 0 0,0,1 0 0,0,0 0 8.56212294529671 0 2.17805383022774 7.61292445586599 0 2.25258799171843 10.0529012645533 0 0 0 cat,chimp,human,macaque,marmoset,orangutan,panda, lincRNA processed_transcript A549@0.574588,AG04450@0.217655,BJ@0.34992,GM12878@0.212098,H1HESC@0.0214175,HELAS3@0.344342,HEPG2@0.573536,HMEC@0.02256,HSMM@0.0631625,HUVEC@0.009029,K562@0.13712,MCF7@0.24687,NHEK@0.0956113,NHLF@0.0484365,SKNSHRA@1.95383, 0 0 0 0 ENSG00000224165.1 ENST00000445389.1 chr2:25194995-25250386 4 567 54818 intergenic 1.86 0 0,1,0 1 0,0,0 0 7.1415410996388 117.344 4.83950617283951 6.71414498887227 97.092 3.5978835978836 9.71421795760516 85.62 0 0 chimp,human,macaque,orangutan, lincRNA processed_transcript A549@0.574588,AG04450@0.217655,BJ@0.34992,GM12878@0.212098,H1HESC@0.0214175,HELAS3@0.344342,HEPG2@0.573536,HMEC@0.02256,HSMM@0.0631625,HUVEC@0.009029,K562@0.13712,MCF7@0.24687,NHEK@0.0956113,NHLF@0.0484365,SKNSHRA@1.95383, 0 0 0 0 ENSG00000224165.1 ENST00000434897.1 chr2:25194995-25262563 3 4657 62907 intergenic 2.59 1 1,1,1 1 0,0,0 9.34507193472192 6.43306786208212 117.344 6.70066566459094 6.1096539335845 97.092 6.62980459523298 8.77781486956936 85.62 0 0 chimp,human,macaque,orangutan, lincRNA processed_transcript A549@0.574588,AG04450@0.217655,BJ@0.34992,GM12878@0.212098,H1HESC@0.0214175,HELAS3@0.344342,HEPG2@0.573536,HMEC@0.02256,HSMM@0.0631625,HUVEC@0.009029,K562@0.13712,MCF7@0.24687,NHEK@0.0956113,NHLF@0.0484365,SKNSHRA@1.95383, 0 0 0 0 ENSG00000224165.1 ENST00000428614.1 chr2:25195013-25258533 4 776 62738 intergenic 1.25 0 0,1,0 1 0,0,0 31.4175257731959 6.45039688864803 117.344 3.38917525773196 6.12611176639358 100.179 3.50515463917526 8.80146004016704 88 0 0 chimp,cow,elephant,human,macaque,marmoset,orangutan, lincRNA processed_transcript A549@0.574588,AG04450@0.217655,BJ@0.34992,GM12878@0.212098,H1HESC@0.0214175,HELAS3@0.344342,HEPG2@0.573536,HMEC@0.02256,HSMM@0.0631625,HUVEC@0.009029,K562@0.13712,MCF7@0.24687,NHEK@0.0956113,NHLF@0.0484365,SKNSHRA@1.95383, 0 0 0 0 ENSG00000224165.1 ENST00000422449.1 chr2:25195034-25195691 2 361 294 intergenic -3.42 1 1,1,1 1 0,0,0 0 0 117.344 0 0 100.179 0 0 88 0 0 chimp,human,macaque,marmoset,orangutan, lincRNA processed_transcript A549@0.574588,AG04450@0.217655,BJ@0.34992,GM12878@0.212098,H1HESC@0.0214175,HELAS3@0.344342,HEPG2@0.573536,HMEC@0.02256,HSMM@0.0631625,HUVEC@0.009029,K562@0.13712,MCF7@0.24687,NHEK@0.0956113,NHLF@0.0484365,SKNSHRA@1.95383, 0 0 0 0 ENSG00000224165.1 ENST00000421842.1 chr2:25195052-25195699 2 253 392 intergenic 0 1 1,1,1 1 0,0,0 0 0 117.344 0 0 100.179 0 0 88 0 0 chimp,human,macaque,marmoset,orangutan, lincRNA processed_transcript A549@0.574588,AG04450@0.217655,BJ@0.34992,GM12878@0.212098,H1HESC@0.0214175,HELAS3@0.344342,HEPG2@0.573536,HMEC@0.02256,HSMM@0.0631625,HUVEC@0.009029,K562@0.13712,MCF7@0.24687,NHEK@0.0956113,NHLF@0.0484365,SKNSHRA@1.95383, 0 0 0 0 ENSG00000230452.1 ENST00000431650.1 chr2:25427182-25432071 2 464 4423 intergenic 0 0 0,1,0 0 0,0,0 0 2.2382997965182 0 0 1.68980330092697 0 0 1.76260456703595 0 0 0 chimp,human,macaque,marmoset,orangutan, antisense antisense A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0.0113323,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000235072.1 ENST00000431557.1 chr2:25592042-25598714 2 417 6253 intergenic -0.76 0 0,0,1 0 0,0,0 34.4940047961631 4.87797857028626 48.641 42.7434052757794 7.28482328482329 59.833 42.7458033573141 8.13529505837198 59.594 0 0 cat,chimp,elephant,human,macaque,marmoset,orangutan, processed_transcript processed_transcript A549@0.0140005,AG04450@0.0070655,BJ@0,GM12878@0,H1HESC@0.0070925,HELAS3@0.023068,HEPG2@0.0274875,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0.0065575,NHEK@0.0745853,NHLF@0,SKNSHRA@0.0128385, 0 0 0 0 ENSG00000224220.1 ENST00000352271.6 chr2:25643986-25650512 3 411 6111 exonic -0.60 0 0,1,1 0 0,0,0 89.2895377128954 3.3742431680576 0 125.749391727494 14.628047782687 2.893 137.846715328467 14.2520045819015 2.992 0 0 chimp,cow,dog,guinea_pig,human,macaque,marmoset,opossum,orangutan,rat, antisense antisense A549@0,AG04450@0.0143015,BJ@0,GM12878@17.2502,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000225378.1 ENST00000420852.1 chr2:26894122-26897332 3 564 2642 intergenic 5.60 0 0,1,0 0 0,0,0 0 0 61.86 0 5.29258137774413 76.202 0 5.44360333080999 67.773 0 0 chimp,human,macaque,marmoset,orangutan, antisense antisense A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000230286.1 ENST00000416226.1 chr2:27173176-27232675 2 304 59193 exonic 0 0 0,0,1 0 0,0,0 95.5263157894737 10.882840876455 0 114.631578947368 17.4650380957208 0 118.973684210526 19.0024665078641 0 0 0 cat,chimp,cow,dog,elephant,guinea_pig,horse,human,macaque,marmoset,mouse,opossum,orangutan,panda,pig,rabbit,rat, antisense antisense A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000205500.4 ENST00000411685.2 chr2:27207644-27236841 5 396 28793 intronic -2.13 1 0,1,0 0 0,0,0 0 5.16319142270338 107.24 15.1688311688312 4.71518084032443 84.639 15.6536796536797 7.12354231211056 82.94 0 0 cat,chimp,human,macaque,marmoset,orangutan,panda, antisense antisense A549@0.0891035,AG04450@0.043875,BJ@0.019121,GM12878@0.038018,H1HESC@0.105715,HELAS3@0.0173965,HEPG2@0.102968,HMEC@0.002083,HSMM@0.0130105,HUVEC@0.120333,K562@0.0452715,MCF7@0.0083665,NHEK@0.010543,NHLF@0.0029555,SKNSHRA@0.168164, 0 0 0 0 ENSG00000205500.4 ENST00000455081.2 chr2:27207646-27237456 6 552 29248 intronic 4.40 1 0,0,0 0 0,0,0 0 5.0634281227597 119.879 13.7681728880157 4.62407401085584 90.669 14.2082514734774 6.98590106851466 87.22 0 0 cat,chimp,cow,horse,human,macaque,marmoset,orangutan,pig, antisense antisense A549@0.0891035,AG04450@0.043875,BJ@0.019121,GM12878@0.038018,H1HESC@0.105715,HELAS3@0.0173965,HEPG2@0.102968,HMEC@0.002083,HSMM@0.0130105,HUVEC@0.120333,K562@0.0452715,MCF7@0.0083665,NHEK@0.010543,NHLF@0.0029555,SKNSHRA@0.168164, 0 0 0 0 ENSG00000205500.4 ENST00000380387.3 chr2:27234637-27237480 3 1963 876 intronic 5.30 0 0,0,0 0 0,0,0 0 0 119.879 0 0 90.669 0 0 87.22 0 0 chimp,human,macaque,marmoset,orangutan, antisense antisense A549@0.0891035,AG04450@0.043875,BJ@0.019121,GM12878@0.038018,H1HESC@0.105715,HELAS3@0.0173965,HEPG2@0.102968,HMEC@0.002083,HSMM@0.0130105,HUVEC@0.120333,K562@0.0452715,MCF7@0.0083665,NHEK@0.010543,NHLF@0.0029555,SKNSHRA@0.168164, 0 0 0 0 ENSG00000205500.4 ENST00000423923.1 chr2:27236678-27237429 2 342 407 intronic 4.47 0 0,0,0 0 0,0,0 0 0 119.879 0 0 90.669 0 0 87.22 1 1 chimp,human,macaque,marmoset,orangutan, antisense retained_intron A549@0.0891035,AG04450@0.043875,BJ@0.019121,GM12878@0.038018,H1HESC@0.105715,HELAS3@0.0173965,HEPG2@0.102968,HMEC@0.002083,HSMM@0.0130105,HUVEC@0.120333,K562@0.0452715,MCF7@0.0083665,NHEK@0.010543,NHLF@0.0029555,SKNSHRA@0.168164, 0 0 0 0 ENSG00000231636.1 ENST00000444217.1 chr2:27272551-27273132 2 405 174 intronic -14.53 1 0,0,1 0 0,0,0 0 0 43.113 0 0 77.339 0 0 78.393 0 0 chimp,human,macaque,marmoset,orangutan, antisense antisense A549@0.0407195,AG04450@0.011014,BJ@0,GM12878@0,H1HESC@0.201358,HELAS3@0,HEPG2@0.0462505,HMEC@0,HSMM@0,HUVEC@0.035058,K562@0.02655,MCF7@0.014931,NHEK@0,NHLF@0,SKNSHRA@0.106033, 0 0 0 0 ENSG00000229122.1 ENST00000411862.1 chr2:27283906-27284683 2 337 438 intronic 0 0 0,0,1 0 0,0,0 0 0 0 8.83086053412463 0 0 9.22255192878338 0 0 0 0 chimp,guinea_pig,human,macaque,marmoset,orangutan, sense_intronic sense_intronic A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000228474.1 ENST00000447619.1 chr2:27293340-27294517 3 455 718 exonic 20.48 1 1,1,1 1 0,0,1 429.808791208791 39.4345403899721 88.248 618.885714285714 67.3621169916434 110.863 589.887912087912 56.1197771587744 91.012 0 0 cat,chimp,cow,dog,elephant,guinea_pig,horse,human,macaque,marmoset,mouse,opossum,orangutan,panda,pig,rabbit,rat, antisense antisense A549@72.2614,AG04450@114.984,BJ@148.875,GM12878@67.0695,H1HESC@109.309,HELAS3@72.1124,HEPG2@117.9,HMEC@136.002,HSMM@124.951,HUVEC@209.808,K562@66.7069,MCF7@42.1404,NHEK@112,NHLF@195.858,SKNSHRA@183.178, 0 0 0 0 ENSG00000228474.1 ENST00000456793.1 chr2:27293340-27294641 3 558 739 exonic 20.48 1 1,1,1 0 0,0,1 330.44982078853 53.4316644113667 129.898 498.254480286738 85.7943166441137 158.962 474.302867383513 74.3031123139377 137.764 0 0 cat,chimp,cow,dog,elephant,guinea_pig,horse,human,macaque,marmoset,mouse,opossum,orangutan,panda,pig,rabbit,rat, antisense antisense A549@72.2614,AG04450@114.984,BJ@148.875,GM12878@67.0695,H1HESC@109.309,HELAS3@72.1124,HEPG2@117.9,HMEC@136.002,HSMM@124.951,HUVEC@209.808,K562@66.7069,MCF7@42.1404,NHEK@112,NHLF@195.858,SKNSHRA@183.178, 0 0 0 0 ENSG00000228474.1 ENST00000429985.1 chr2:27293355-27294517 2 557 603 exonic 20.48 1 1,1,1 1 0,0,1 322.159784560144 61.0829187396352 88.248 466.971274685817 99.5737976782753 110.863 444.572710951526 85.1641791044776 91.012 0 0 cat,chimp,cow,dog,elephant,guinea_pig,horse,human,macaque,marmoset,mouse,opossum,orangutan,panda,pig,rabbit,rat, antisense retained_intron A549@72.2614,AG04450@114.984,BJ@148.875,GM12878@67.0695,H1HESC@109.309,HELAS3@72.1124,HEPG2@117.9,HMEC@136.002,HSMM@124.951,HUVEC@209.808,K562@66.7069,MCF7@42.1404,NHEK@112,NHLF@195.858,SKNSHRA@183.178, 0 0 0 0 ENSG00000248793.1 ENST00000515139.1 chr2:27505301-27526416 2 874 20239 exonic -8.69 0 0,0,1 0 0,0,0 13.2974828375286 17.7411927466772 0 3.90274599542334 25.5566974652898 5.202 3.87185354691076 71.1880033598498 5.31 0 0 chimp,horse,human,macaque,marmoset,orangutan, lincRNA lincRNA A549@0.014174,AG04450@0,BJ@0,GM12878@0.006677,H1HESC@0.0202145,HELAS3@0.0484555,HEPG2@0.0160305,HMEC@0,HSMM@0,HUVEC@0.015959,K562@0,MCF7@0,NHEK@0,NHLF@0.009273,SKNSHRA@0.019312, 0 0 0 0 ENSG00000234945.1 ENST00000416453.1 chr2:27558409-27560670 4 837 1418 exonic 0.65 0 0,0,0 0 0,0,0 194.10394265233 105.323695345557 0 262.26284348865 122.258815232722 0 242.665471923536 98.3152327221438 0 0 0 cat,chimp,cow,dog,elephant,horse,human,macaque,marmoset,mouse,orangutan,panda,rabbit, antisense antisense A549@0,AG04450@0,BJ@0.0217705,GM12878@0,H1HESC@0.0106195,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0.019545,MCF7@0,NHEK@0.0120597,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000234072.1 ENST00000447070.1 chr2:27579113-27583123 2 3058 950 exonic 5.52 0 1,1,1 1 0,0,0 24.2017658600392 0 11.051 28.6344015696534 17.2821052631579 32.564 33.0696533682145 17.74 31.86 0 0 human, lincRNA processed_transcript A549@3.7116,AG04450@0.417029,BJ@0.489386,GM12878@1.84079,H1HESC@1.42571,HELAS3@3.07739,HEPG2@4.67373,HMEC@0.743675,HSMM@0.921058,HUVEC@1.13247,K562@4.30614,MCF7@3.78844,NHEK@0.828719,NHLF@0.640367,SKNSHRA@3.28794, 0 0 0 0 ENSG00000234072.1 ENST00000453289.1 chr2:27580007-27581057 2 534 514 intronic 0 0 1,1,1 1 0,0,0 0 0 85.317 0 0 127.963 0 0 125.872 0 0 human, lincRNA processed_transcript A549@3.7116,AG04450@0.417029,BJ@0.489386,GM12878@1.84079,H1HESC@1.42571,HELAS3@3.07739,HEPG2@4.67373,HMEC@0.743675,HSMM@0.921058,HUVEC@1.13247,K562@4.30614,MCF7@3.78844,NHEK@0.828719,NHLF@0.640367,SKNSHRA@3.28794, 0 0 0 0 ENSG00000234072.1 ENST00000412749.1 chr2:27580055-27590489 3 396 10034 exonic -1.06 0 0,1,0 1 0,0,0 109.656565656566 23.2186565676699 85.317 144.292929292929 40.7721746063385 125.573 168.527777777778 42.6002591189954 123.442 0 0 cat,chimp,cow,horse,human,macaque,marmoset,orangutan,rat, lincRNA processed_transcript A549@3.7116,AG04450@0.417029,BJ@0.489386,GM12878@1.84079,H1HESC@1.42571,HELAS3@3.07739,HEPG2@4.67373,HMEC@0.743675,HSMM@0.921058,HUVEC@1.13247,K562@4.30614,MCF7@3.78844,NHEK@0.828719,NHLF@0.640367,SKNSHRA@3.28794, 0 0 0 0 ENSG00000223522.1 ENST00000418963.1 chr2:28530558-28533326 3 2107 657 intronic 1.59 1 0,0,0 0 0,0,0 0 13.0593607305936 0 28.5671570953963 90.9421613394216 3.88 145.686283815852 101.724505327245 7.228 0 0 chimp,human,macaque,marmoset,orangutan, antisense antisense A549@0.0029425,AG04450@0.0030565,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0.017732,HUVEC@0.0056415,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000229951.1 ENST00000427929.1 chr2:28607276-28617539 2 2848 7413 intronic 5.18 0 0,0,0 0 0,0,0 13.000702247191 74.1265344664778 124.136 12.031952247191 139.218669904222 147.927 9.78792134831461 122.642924591933 143.198 0 0 chimp,human,orangutan, lincRNA processed_transcript A549@0.020181,AG04450@0.0880945,BJ@0.110508,GM12878@0,H1HESC@0.000868,HELAS3@0.055973,HEPG2@0.0441975,HMEC@0.018194,HSMM@0.068442,HUVEC@0.0164745,K562@0.000862,MCF7@0.255054,NHEK@0.0148057,NHLF@0.0414125,SKNSHRA@0.009477, 0 0 0 0 ENSG00000229951.1 ENST00000445878.1 chr2:28607276-28617539 3 2998 7261 intronic 5.18 0 0,0,0 0 0,0,0 12.3502334889927 75.6782812284809 124.136 11.4299533022015 142.133039526236 147.927 9.29819879919947 125.210301611348 143.198 0 0 chimp,human,orangutan, lincRNA processed_transcript A549@0.020181,AG04450@0.0880945,BJ@0.110508,GM12878@0,H1HESC@0.000868,HELAS3@0.055973,HEPG2@0.0441975,HMEC@0.018194,HSMM@0.068442,HUVEC@0.0164745,K562@0.000862,MCF7@0.255054,NHEK@0.0148057,NHLF@0.0414125,SKNSHRA@0.009477, 0 0 0 0 ENSG00000227938.1 ENST00000439700.1 chr2:28671034-28673051 2 847 1168 intergenic -3.11 0 0,1,0 0 0,0,0 97.3034238488784 44.0154109589041 0 109.524203069658 7.73972602739726 0 109.701298701299 7.71917808219178 0 0 0 chimp,cow,dog,elephant,horse,human,macaque,marmoset,panda,rabbit, lincRNA lincRNA A549@0.0270505,AG04450@0,BJ@0.0076235,GM12878@0,H1HESC@0,HELAS3@0.130133,HEPG2@0.006426,HMEC@0,HSMM@0.0220345,HUVEC@0,K562@0,MCF7@0,NHEK@0.016878,NHLF@0,SKNSHRA@0.017044, 0 0 0 0 ENSG00000230730.1 ENST00000431376.1 chr2:28856148-28887406 2 579 30677 intronic 2.18 0 0,0,0 0 0,0,0 0 2.16673729504189 0 0 5.08270039443231 23.569 0 5.80216448805294 23.919 0 0 chimp,human,marmoset, antisense antisense A549@0,AG04450@0.066965,BJ@0.0246325,GM12878@0,H1HESC@0,HELAS3@0.0840645,HEPG2@0.168496,HMEC@0,HSMM@0.600292,HUVEC@0.049348,K562@0.0039965,MCF7@0.0241565,NHEK@0.0234717,NHLF@0,SKNSHRA@0.082107, 0 0 0 0 ENSG00000226833.1 ENST00000452212.1 chr2:28931819-28959071 2 724 26526 intergenic 4.15 0 0,1,0 0 0,0,0 13.6740331491713 1.52491894744779 28.987 14.2527624309392 7.04195883284325 20.358 16.9240331491713 8.40247304531403 10.043 0 0 cat,chimp,cow,dog,elephant,horse,human,macaque,marmoset,orangutan,panda,pig,rabbit,rat, antisense antisense A549@0.157635,AG04450@0.034529,BJ@0.0505745,GM12878@0.0819225,H1HESC@0.0789815,HELAS3@0.0980885,HEPG2@0.0563355,HMEC@0.011327,HSMM@0.116147,HUVEC@0.0284105,K562@0.080173,MCF7@0.103321,NHEK@0.05406,NHLF@0.0348305,SKNSHRA@0.149238, 0 0 0 0 ENSG00000226833.1 ENST00000428036.1 chr2:28932191-28959058 4 482 26379 intergenic -1.35 0 0,1,0 0 0,0,0 20.5394190871369 1.53341673300732 28.987 15.1887966804979 6.7886576443383 20.358 15.4439834024896 8.15190113347739 10.043 0 0 chimp,cow,elephant,human,macaque,orangutan,pig, antisense antisense A549@0.157635,AG04450@0.034529,BJ@0.0505745,GM12878@0.0819225,H1HESC@0.0789815,HELAS3@0.0980885,HEPG2@0.0563355,HMEC@0.011327,HSMM@0.116147,HUVEC@0.0284105,K562@0.080173,MCF7@0.103321,NHEK@0.05406,NHLF@0.0348305,SKNSHRA@0.149238, 0 0 0 0 ENSG00000226833.1 ENST00000444501.1 chr2:28945306-28958975 3 720 12945 intergenic -14.98 0 0,1,0 0 0,0,0 0 3.12475859405176 28.987 10.1680555555556 11.1221320973349 20.358 10.3388888888889 13.5393588258015 10.043 0 0 chimp,human,macaque,marmoset,orangutan, antisense antisense A549@0.157635,AG04450@0.034529,BJ@0.0505745,GM12878@0.0819225,H1HESC@0.0789815,HELAS3@0.0980885,HEPG2@0.0563355,HMEC@0.011327,HSMM@0.116147,HUVEC@0.0284105,K562@0.080173,MCF7@0.103321,NHEK@0.05406,NHLF@0.0348305,SKNSHRA@0.149238, 0 0 0 0 ENSG00000229224.1 ENST00000446073.1 chr2:29319709-29320391 2 400 280 intergenic 4.17 0 0,0,1 0 0,0,0 0 0 0 0 0 35.699 0 0 35.908 0 0 chimp,human,macaque,marmoset,orangutan,rabbit, antisense antisense A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000230737.1 ENST00000421411.1 chr2:30113237-30115220 2 689 1292 intronic -9.26 0 0,0,0 0 0,0,0 0 0 0 0 17.5363777089783 4.913 0 20.9504643962848 8.455 0 0 chimp,cow,elephant,horse,human,macaque,marmoset,orangutan,panda,rabbit, antisense antisense A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000197644.2 ENST00000359823.2 chr2:30122463-30130065 2 198 7402 intronic -1.37 0 0,0,0 0 0,0,0 0 19.3974601459065 5.21 0 39.8328830045934 15.48 0 44.5077006214537 11.793 0 0 human,macaque, antisense antisense A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000233862.1 ENST00000453606.1 chr2:30273932-30363532 3 349 89247 intergenic 3.12 0 0,0,1 0 0,0,0 0 2.00940087621993 0 2.48424068767908 5.75554360370657 0 2.53581661891117 6.70081907515098 5.522 0 0 chimp,cow,dog,guinea_pig,horse,human,macaque,marmoset,mouse,orangutan,panda,pig,rabbit,rat, antisense antisense A549@0.043705,AG04450@0.0124825,BJ@0.0144065,GM12878@0.032974,H1HESC@0.0236415,HELAS3@0.0213055,HEPG2@0.013012,HMEC@0.001149,HSMM@0.012706,HUVEC@0.0248015,K562@0.01108,MCF7@0.010849,NHEK@0.0100507,NHLF@0.0032735,SKNSHRA@0.092498, 0 0 0 0 ENSG00000233862.1 ENST00000420016.1 chr2:30334041-30359199 3 491 24663 intergenic 0 0 0,1,0 0 0,0,0 0 1.823662976929 0 2.92057026476578 1.64104123585938 4.108 3.06720977596741 2.2726756680047 1.255 0 0 horse,human, antisense antisense A549@0.043705,AG04450@0.0124825,BJ@0.0144065,GM12878@0.032974,H1HESC@0.0236415,HELAS3@0.0213055,HEPG2@0.013012,HMEC@0.001149,HSMM@0.012706,HUVEC@0.0248015,K562@0.01108,MCF7@0.010849,NHEK@0.0100507,NHLF@0.0032735,SKNSHRA@0.092498, 0 0 0 0 ENSG00000233862.1 ENST00000455424.1 chr2:30355211-30366670 3 3560 7895 intergenic 2.34 1 0,0,0 0 0,0,0 0 0 0 0.402808988764045 1.33210892970234 0 1.97415730337079 0.991006966434452 0 0 0 human,macaque,orangutan, antisense antisense A549@0.043705,AG04450@0.0124825,BJ@0.0144065,GM12878@0.032974,H1HESC@0.0236415,HELAS3@0.0213055,HEPG2@0.013012,HMEC@0.001149,HSMM@0.012706,HUVEC@0.0248015,K562@0.01108,MCF7@0.010849,NHEK@0.0100507,NHLF@0.0032735,SKNSHRA@0.092498, 0 0 0 0 ENSG00000235997.2 ENST00000421976.2 chr2:30569525-30575297 2 2950 2820 intergenic 2.47 1 0,0,1 0 0,0,0 13.4466330737517 0 0 31.120476408612 1.43096234309623 0 34.0655061841503 1.47336122733612 0 0 0 chimp,elephant,human,macaque,marmoset,orangutan,pig, lincRNA lincRNA A549@0.0041565,AG04450@0.059034,BJ@0.018078,GM12878@0.070757,H1HESC@0.163894,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0.051973,HUVEC@0,K562@0.01945,MCF7@0.002755,NHEK@0,NHLF@0.435276,SKNSHRA@0.024402, 0 0 0 0 ENSG00000234579.1 ENST00000449780.1 chr2:31209805-31214292 2 366 4119 intronic -1.86 1 0,1,0 0 0,0,0 0 15.6841466375334 55.013 3.3879781420765 19.5389657683904 107.766 3.42896174863388 15.1412964311726 111.417 0 0 chimp,horse,human,macaque,marmoset,orangutan,pig, antisense antisense A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000049319.2 ENST00000405650.1 chr2:31747550-31806136 5 4642 53936 intergenic 9.40 1 0,1,1 0 0,1,1 29.5435157259802 4.67735835063779 0 62.2104696251616 3.73457431029368 0 68.8632055148643 5.7612355384159 0 0 0 chimp,elephant,human,macaque, lincRNA lincRNA A549@0.037727,AG04450@0.000993,BJ@0.005258,GM12878@0.0059965,H1HESC@0.0139145,HELAS3@0.002017,HEPG2@0.013294,HMEC@0,HSMM@0.0008675,HUVEC@0,K562@0.006156,MCF7@0.014386,NHEK@0.058266,NHLF@0.0008135,SKNSHRA@0.0009765, 0 0 0 0 ENSG00000049319.2 ENST00000233139.1 chr2:31749656-31805969 6 2366 53937 intergenic 1.02 1 1,1,1 0 0,1,1 50.1770921386306 4.67727163171849 12.152 108.619188503804 3.73450507073067 23.96 123.079459002536 5.76112872425237 20.22 0 0 chimp,elephant,human,macaque,orangutan,rat, lincRNA lincRNA A549@0.037727,AG04450@0.000993,BJ@0.005258,GM12878@0.0059965,H1HESC@0.0139145,HELAS3@0.002017,HEPG2@0.013294,HMEC@0,HSMM@0.0008675,HUVEC@0,K562@0.006156,MCF7@0.014386,NHEK@0.058266,NHLF@0.0008135,SKNSHRA@0.0009765, 0 0 0 0 ENSG00000228563.1 ENST00000435713.1 chr2:31752012-31788534 3 643 35875 intergenic -9.96 0 0,0,0 0 0,0,0 0 6.11654355400697 26.719 0 6.70388850174216 43.851 0 9.66634146341463 47.844 0 0 chimp,horse,human,orangutan, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000223647.1 ENST00000416279.1 chr2:32018892-32029049 5 413 9736 intergenic 0.36 1 0,1,0 0 0,0,0 0 0 0 0 0 0 0 0 0 0 0 chimp,human,macaque,orangutan, lincRNA lincRNA A549@0.005193,AG04450@0,BJ@0,GM12878@0.0231355,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0.004919,NHEK@0.0275787,NHLF@0,SKNSHRA@0.0066525, 0 0 0 0 ENSG00000230046.1 ENST00000455572.1 chr2:32602699-32604667 2 695 1271 exonic -8.23 0 0,1,0 0 0,0,0 35.4302158273381 39.1510621557828 66.234 44.9611510791367 51.219512195122 103.752 49.7956834532374 53.6176239181747 97.659 0 0 cat,chimp,cow,dog,elephant,guinea_pig,horse,human,macaque,marmoset,opossum,orangutan,panda,rabbit,rat, antisense antisense A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000230876.2 ENST00000414054.1 chr2:33050510-33151760 5 1789 99453 intergenic -0.70 0 0,0,0 0 0,0,0 13.4823923979877 5.39888188390496 232.32 12.0804918949134 10.3554141152102 208.519 8.25265511458916 12.3867857178768 204.519 0 0 chimp,human,macaque,marmoset,orangutan, lincRNA lincRNA A549@0.002031,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0.072175, 0 0 0 0 ENSG00000230876.2 ENST00000424364.2 chr2:33066081-33127190 6 685 60414 intergenic 3.54 0 0,0,0 0 0,0,0 0 3.39865591842815 0 25.7769679300292 9.29050038898913 2.976 32.7405247813411 11.4702464701306 3.012 0 0 chimp,cow,human,macaque,marmoset,orangutan, lincRNA lincRNA A549@0.002031,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0.072175, 0 0 0 0 ENSG00000230876.2 ENST00000435075.1 chr2:33107868-33151589 4 1356 42359 intergenic -0.70 0 0,0,0 0 0,0,0 0 1.79196864892939 0 2.56047197640118 7.80700677541963 0 2.59144542772861 9.08928444958569 6.804 0 0 chimp,human,macaque,marmoset,orangutan,rabbit, lincRNA lincRNA A549@0.002031,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0.072175, 0 0 0 0 ENSG00000236854.1 ENST00000440786.1 chr2:33152194-33153472 3 479 795 intergenic 3.76 0 0,0,0 0 0,0,0 0 0 0 7.98538622129436 0 0 8.11064718162839 0 0 0 0 chimp,human,macaque,marmoset,orangutan, lincRNA lincRNA A549@0.0045035,AG04450@0.0200695,BJ@0.010041,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0.004003,SKNSHRA@0.072776, 0 0 0 0 ENSG00000237133.1 ENST00000437680.1 chr2:33780114-33788614 2 336 8162 exonic -2.03 0 0,0,1 0 0,0,0 0 25.661602548395 0 23.6428571428571 43.1845135996079 0 24.4791666666667 45.4592011761823 0 0 0 chimp,dog,horse,human,macaque,marmoset,orangutan,panda,pig, antisense antisense A549@0.197893,AG04450@0.11374,BJ@0.157272,GM12878@0.071192,H1HESC@0.126072,HELAS3@0.096321,HEPG2@0.185206,HMEC@0.036343,HSMM@0.031751,HUVEC@0.0459895,K562@0.050984,MCF7@0.0118965,NHEK@0.254945,NHLF@0.017126,SKNSHRA@0.047011, 0 0 0 0 ENSG00000203386.2 ENST00000366209.2 chr2:33931953-34522820 6 773 590084 intergenic -24.79 0 0,0,0 0 0,0,0 72.8279430789133 5.2339327960087 0 63.3583441138422 8.52354410558498 0 74.346701164295 11.301285918615 0 0 0 chimp,dog,guinea_pig,horse,human,macaque,marmoset,mouse,opossum,orangutan,pig,rabbit,rat, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0.999955,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0.0052825,HUVEC@0,K562@0.0119,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000203386.2 ENST00000442026.1 chr2:33931975-34286114 7 670 353457 intergenic 0 0 0,0,1 0 0,0,0 84.0238805970149 5.47187352351205 0 73.0985074626866 9.05041914575183 0 85.7761194029851 12.7013017142113 0 0 0 cat,chimp,cow,dog,elephant,guinea_pig,horse,human,macaque,marmoset,mouse,opossum,orangutan,pig,rabbit,rat, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0.999955,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0.0052825,HUVEC@0,K562@0.0119,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000237790.1 ENST00000423593.1 chr2:34292293-34294617 3 594 1726 intergenic 1.54 0 0,1,0 0 0,0,0 0 0 0 26.3367003367003 26.6384704519119 1.984 45.0976430976431 31.3435689455388 2.072 0 0 cat,chimp,dog,horse,human,macaque,marmoset,orangutan,pig, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0.240505,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0.000625,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000226785.1 ENST00000422558.1 chr2:34608855-34860407 3 564 250984 intergenic 0 0 0,0,0 0 0,0,0 0 4.55323446912951 0 0 6.50541070347114 0 0 7.54140901412042 0 0 0 chimp,elephant,horse,human,macaque,marmoset,orangutan,panda,rabbit, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0.074575,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0.004744, 0 0 0 0 ENSG00000228262.1 ENST00000423663.1 chr2:34902646-34947630 3 1106 43874 intergenic -2.39 0 0,1,1 0 0,0,0 0 0.533049186306241 0 0 1.88154715776998 0 0 2.61612800291745 0 0 0 chimp,human, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@1.81561,H1HESC@0.006368,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0.055361,NHEK@0.00105933,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000228262.1 ENST00000453774.1 chr2:34938657-34963298 3 1202 23435 intergenic 2.33 1 0,0,0 0 0,0,0 0 15.2814166844463 0 0 17.6709195647536 0 0 17.8310219756774 0 0 0 chimp,human,macaque,marmoset,orangutan, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@1.81561,H1HESC@0.006368,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0.055361,NHEK@0.00105933,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000232153.2 ENST00000458413.2 chr2:34960042-34962185 2 169 1972 intergenic 0 0 0,0,1 0 0,0,0 0 23.7865111561866 0 0 49.4325557809331 0 0 53.6348884381339 0 0 0 chimp,elephant,guinea_pig,horse,human,macaque,marmoset,panda, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000226994.1 ENST00000453451.1 chr2:35024917-35388178 6 574 362677 intergenic -0.94 0 0,0,0 0 0,0,0 7.05226480836237 3.09960102239734 120.946 14.8588850174216 6.54092484497225 127.318 8.41114982578397 9.02571434085977 104.435 0 0 cat,chimp,dog,elephant,horse,human,macaque,marmoset,orangutan,panda,rabbit, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0.0100845,H1HESC@0,HELAS3@0.0240435,HEPG2@0.009406,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000237320.1 ENST00000414796.1 chr2:35223345-35225227 3 491 1387 intergenic -4.33 1 0,0,1 0 0,0,0 24.8492871690428 25.1766402307138 109.982 142.969450101833 35.3583273251622 101.798 146.211812627291 39.6697909156453 98.228 0 0 chimp,elephant,guinea_pig,horse,human,macaque,mouse,orangutan,panda,pig, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000232028.1 ENST00000433893.1 chr2:37552483-37553940 2 502 953 intergenic -2.88 0 0,1,0 0 0,0,0 82.2569721115538 0 0 33.496015936255 0 134.447 69.1414342629482 0 132.772 0 0 chimp,cow,human,macaque,marmoset,mouse,orangutan, lincRNA lincRNA A549@0.010961,AG04450@0.0182395,BJ@0.0145715,GM12878@0,H1HESC@0.0180515,HELAS3@0.113171,HEPG2@0.029187,HMEC@0,HSMM@0.008165,HUVEC@0,K562@0.082755,MCF7@0.007978,NHEK@0.00759833,NHLF@0.0114855,SKNSHRA@0.135689, 0 0 0 0 ENSG00000236213.1 ENST00000419425.1 chr2:37827279-37873841 5 543 46011 exonic 1.55 0 0,0,1 0 0,0,0 0 24.2546130273196 0 12.780847145488 26.3798004824933 0 12.9318600368324 27.9434048379735 0 0 0 chimp,elephant,human,macaque,marmoset,orangutan, antisense antisense A549@0,AG04450@0.0199485,BJ@0.0044925,GM12878@0.096657,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0.00416,HUVEC@0,K562@0.337849,MCF7@0,NHEK@0.00711,NHLF@0,SKNSHRA@0.0041475, 0 0 0 0 ENSG00000236572.1 ENST00000431712.1 chr2:37971476-37974189 2 382 2329 intergenic -31.82 0 0,0,0 0 0,0,0 0 0 0 0 0.745384285100902 0 0 12.4731644482611 0 0 0 cat,chimp,elephant,horse,human,macaque,marmoset,orangutan,panda,pig, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0.006396,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000237803.1 ENST00000413792.1 chr2:38053390-38056575 3 1920 1261 intergenic 6.37 0 1,1,1 0 0,0,0 3.15677083333333 87.7494052339413 0 18.0020833333333 43.4758128469469 0 24.1677083333333 38.5162569389374 0 0 0 chimp,cow,dog,elephant,guinea_pig,human,macaque,orangutan,panda,pig, lincRNA non_coding A549@0,AG04450@0.123332,BJ@0.0709395,GM12878@0,H1HESC@0.0031335,HELAS3@0,HEPG2@0,HMEC@0.006185,HSMM@0.184937,HUVEC@0.0909915,K562@0,MCF7@0,NHEK@0.004792,NHLF@0.127267,SKNSHRA@0.163, 0 0 0 0 ENSG00000237803.1 ENST00000446799.1 chr2:38054752-38103006 4 658 47590 intergenic -5.36 0 0,1,0 0 0,0,0 0 10.3894095398193 0 1.64133738601824 19.7047278840092 1.434 3.75531914893617 20.836772431183 1.506 0 0 chimp,cow,guinea_pig,horse,human,macaque,marmoset,orangutan,panda,rabbit, lincRNA non_coding A549@0,AG04450@0.123332,BJ@0.0709395,GM12878@0,H1HESC@0.0031335,HELAS3@0,HEPG2@0,HMEC@0.006185,HSMM@0.184937,HUVEC@0.0909915,K562@0,MCF7@0,NHEK@0.004792,NHLF@0.127267,SKNSHRA@0.163, 0 0 0 0 ENSG00000237803.1 ENST00000418746.1 chr2:38067181-38103417 3 548 35684 intergenic 2.46 0 0,0,0 0 0,0,0 0.614963503649635 5.10766730187199 0 0 15.2258154915368 0 0.472627737226277 16.7098699697343 0 0 0 chimp,cow,dog,human,macaque,marmoset,orangutan,panda,pig,rabbit, lincRNA non_coding A549@0,AG04450@0.123332,BJ@0.0709395,GM12878@0,H1HESC@0.0031335,HELAS3@0,HEPG2@0,HMEC@0.006185,HSMM@0.184937,HUVEC@0.0909915,K562@0,MCF7@0,NHEK@0.004792,NHLF@0.127267,SKNSHRA@0.163, 0 0 0 0 ENSG00000235848.1 ENST00000414365.1 chr2:38177477-38263484 4 522 85479 exonic -0.48 0 0,0,0 0 0,0,0 32.9885057471264 4.18689970636063 0 53.3218390804598 7.06255337568292 0 51.5057471264368 9.55738836439359 2.35 0 0 cat,chimp,dog,guinea_pig,horse,human,macaque,mouse,orangutan,rabbit,rat, antisense antisense A549@0,AG04450@0,BJ@0,GM12878@0.007665,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0.003822,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000232973.3 ENST00000431999.1 chr2:38302791-38358759 2 525 55441 exonic 3.53 0 0,0,0 0 0,0,0 0 9.63591926552551 65.86 22.3752380952381 12.8478562796486 224.249 20.2761904761905 13.9468985047167 224.204 0 0 chimp,cow,dog,guinea_pig,horse,human,macaque,marmoset,mouse,orangutan,panda,pig,rabbit,rat, antisense antisense A549@0.075998,AG04450@0.0376975,BJ@0.012322,GM12878@0.014869,H1HESC@0.0610795,HELAS3@0.067175,HEPG2@0.020865,HMEC@0,HSMM@0.002595,HUVEC@0,K562@0.0114385,MCF7@0.12311,NHEK@0.007486,NHLF@0.111497,SKNSHRA@0.045797, 0 0 0 0 ENSG00000232973.3 ENST00000427168.2 chr2:38325722-38358718 3 481 32511 intergenic 1.21 0 0,0,0 0 0,0,0 0 6.0885238842238 0 0 10.7873950355264 4.335 0 12.9877272307834 12.286 0 0 chimp,human,macaque,marmoset,orangutan, antisense antisense A549@0.075998,AG04450@0.0376975,BJ@0.012322,GM12878@0.014869,H1HESC@0.0610795,HELAS3@0.067175,HEPG2@0.020865,HMEC@0,HSMM@0.002595,HUVEC@0,K562@0.0114385,MCF7@0.12311,NHEK@0.007486,NHLF@0.111497,SKNSHRA@0.045797, 0 0 0 0 ENSG00000232973.3 ENST00000413828.2 chr2:38358247-38408997 3 1754 48992 intergenic 8.54 1 0,0,0 0 0,0,0 60.466362599772 3.03182152188112 0 7.50171037628278 5.75957299150882 0 9.95553021664766 7.51349199869366 0 0 0 chimp,dog,horse,human,macaque,orangutan,panda, antisense antisense A549@0.075998,AG04450@0.0376975,BJ@0.012322,GM12878@0.014869,H1HESC@0.0610795,HELAS3@0.067175,HEPG2@0.020865,HMEC@0,HSMM@0.002595,HUVEC@0,K562@0.0114385,MCF7@0.12311,NHEK@0.007486,NHLF@0.111497,SKNSHRA@0.045797, 0 0 0 0 ENSG00000229160.1 ENST00000417213.1 chr2:38359779-38366088 3 348 5957 intergenic -9.53 0 0,0,0 0 0,0,0 0 0 15.376 0 0 24.309 0 0 24.343 0 0 chimp,elephant,human,orangutan, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0.020874,H1HESC@0,HELAS3@0.045367,HEPG2@0.046628,HMEC@0.769583,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0.279209,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000227292.1 ENST00000450854.1 chr2:38430505-38466732 2 620 35605 intergenic -3.47 0 0,1,1 0 0,0,0 88.7096774193548 8.28422974301362 0 113.28064516129 6.44021907035529 10.601 122.18064516129 24.5277067827552 24.466 0 0 cat,chimp,cow,dog,elephant,guinea_pig,horse,human,macaque,marmoset,mouse,opossum,orangutan,panda,pig,rabbit, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0.269765,HEPG2@0.320136,HMEC@0.013166,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@1.54824,NHLF@0.090171,SKNSHRA@0, 0 0 0 0 ENSG00000231367.1 ENST00000438085.1 chr2:38633861-38645069 2 421 10785 intergenic -1.24 0 0,0,0 0 0,0,0 43.2684085510689 19.7546592489569 26.765 11.5083135391924 13.5993509503941 3.036 41.8194774346793 15.1852573018081 4.26 0 0 chimp,human,macaque,marmoset,orangutan,pig, lincRNA lincRNA A549@0.0023895,AG04450@0.0266005,BJ@0,GM12878@0,H1HESC@0.0053835,HELAS3@0,HEPG2@0.0626485,HMEC@0.01771,HSMM@0.039741,HUVEC@0,K562@0.343624,MCF7@0.062714,NHEK@0.005635,NHLF@0.0279055,SKNSHRA@0.0276455, 0 0 0 0 ENSG00000231367.1 ENST00000417039.1 chr2:38633870-38742882 5 1151 107853 intergenic 2.09 0 0,1,0 0 0,0,0 15.8262380538662 12.0640872298406 0 4.20938314509123 13.3775231101592 0 15.2962641181581 18.896062232854 0 0 0 chimp,human,macaque,marmoset,orangutan, lincRNA lincRNA A549@0.0023895,AG04450@0.0266005,BJ@0,GM12878@0,H1HESC@0.0053835,HELAS3@0,HEPG2@0.0626485,HMEC@0.01771,HSMM@0.039741,HUVEC@0,K562@0.343624,MCF7@0.062714,NHEK@0.005635,NHLF@0.0279055,SKNSHRA@0.0276455, 0 0 0 0 ENSG00000235009.1 ENST00000457385.1 chr2:38658436-38660715 2 378 1899 intergenic 2.92 1 0,0,0 0 0,0,0 0 3.63191153238547 0 0 5.36176935229068 3.156 0 7.1216429699842 11.437 0 0 cat,chimp,cow,dog,guinea_pig,horse,human,macaque,marmoset,orangutan,pig,rabbit, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000231367.1 ENST00000437979.1 chr2:38685779-38690256 2 449 4026 intergenic -3.28 1 0,0,1 0 0,0,0 0 2.58718330849478 0 0 10.3790362642822 1.61 0 80.9706905116741 1.701 0 0 chimp,guinea_pig,horse,human,macaque,pig, lincRNA lincRNA A549@0.0023895,AG04450@0.0266005,BJ@0,GM12878@0,H1HESC@0.0053835,HELAS3@0,HEPG2@0.0626485,HMEC@0.01771,HSMM@0.039741,HUVEC@0,K562@0.343624,MCF7@0.062714,NHEK@0.005635,NHLF@0.0279055,SKNSHRA@0.0276455, 0 0 0 0 ENSG00000231367.1 ENST00000421463.1 chr2:38685785-38710235 4 631 23813 intergenic 2.67 1 0,1,1 0 0,0,0 0 29.299164322009 0 0 27.6354092302524 4.153 0 46.1291731407215 4.291 0 0 chimp,human,macaque,orangutan, lincRNA lincRNA A549@0.0023895,AG04450@0.0266005,BJ@0,GM12878@0,H1HESC@0.0053835,HELAS3@0,HEPG2@0.0626485,HMEC@0.01771,HSMM@0.039741,HUVEC@0,K562@0.343624,MCF7@0.062714,NHEK@0.005635,NHLF@0.0279055,SKNSHRA@0.0276455, 0 0 0 0 ENSG00000231367.1 ENST00000413227.1 chr2:38685788-38696583 2 426 10367 intergenic 0.02 1 0,0,1 0 0,0,0 0 1.00472653612424 0 0 6.84701456544806 2.43 0 34.8695861869393 2.448 0 0 chimp,horse,human,macaque,marmoset,orangutan, lincRNA lincRNA A549@0.0023895,AG04450@0.0266005,BJ@0,GM12878@0,H1HESC@0.0053835,HELAS3@0,HEPG2@0.0626485,HMEC@0.01771,HSMM@0.039741,HUVEC@0,K562@0.343624,MCF7@0.062714,NHEK@0.005635,NHLF@0.0279055,SKNSHRA@0.0276455, 0 0 0 0 ENSG00000235586.1 ENST00000457097.1 chr2:38828740-38829320 2 231 347 intronic 11.49 0 0,0,1 0 0,0,0 0 0 0 11.6883116883117 0 0 11.7748917748918 0 0 0 0 cat,chimp,cow,guinea_pig,human,macaque,marmoset,orangutan,panda,rabbit, antisense antisense A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0.017573,HSMM@0,HUVEC@0.0104355,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0.0097375, 0 0 0 0 ENSG00000232518.1 ENST00000446277.1 chr2:38895830-38898563 4 548 2179 intronic -0.23 0 0,0,0 0 0,0,0 0 0 0 40.8540145985401 7.03487838458008 5.258 34.0383211678832 9.18311151904543 5.698 0 0 chimp,human,macaque,orangutan, antisense antisense A549@0.01394,AG04450@0,BJ@0,GM12878@0.0121145,H1HESC@0,HELAS3@0.016936,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0.003642,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000225284.1 ENST00000442829.1 chr2:39088862-39090275 2 548 863 exonic 0 0 0,0,0 0 0,0,0 23.4251824817518 93.5272305909618 356.547 22.8905109489051 85.2618771726535 340.76 24.8631386861314 94.1413673232908 272.556 0 0 cat,chimp,dog,horse,human,macaque,marmoset,orangutan,panda, antisense antisense A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000229692.1 ENST00000420644.1 chr2:39220117-39220998 2 537 342 intronic -3.73 0 0,0,0 0 0,0,0 0 0 0 0 0 0 2.71508379888268 0 0 0 0 chimp,cow,dog,horse,human,macaque,marmoset,orangutan,panda,rabbit, sense_intronic sense_intronic A549@0.336954,AG04450@0.207682,BJ@0.140103,GM12878@0.626425,H1HESC@0.0585085,HELAS3@0.372138,HEPG2@0.280628,HMEC@0.035374,HSMM@0.052117,HUVEC@0.0076865,K562@0.629258,MCF7@0.34693,NHEK@0.101779,NHLF@0.0667515,SKNSHRA@0.466487, 0 0 0 0 ENSG00000231312.2 ENST00000426083.1 chr2:39663778-39831216 9 1429 165993 intronic -0.75 1 0,0,0 0 0,0,0 20.6717984604619 17.3441831884477 85.709 23.5990202939118 20.7032404980933 100.276 31.4128761371589 22.2174910990223 108.053 0 0 chimp,cow,elephant,horse,human,macaque,marmoset,orangutan,pig, processed_transcript processed_transcript A549@0.946071,AG04450@1.05265,BJ@1.11326,GM12878@0.008443,H1HESC@0.405799,HELAS3@1.11485,HEPG2@2.38645,HMEC@0.362283,HSMM@2.24308,HUVEC@0.466658,K562@1.18121,MCF7@0.353649,NHEK@0.502913,NHLF@3.94134,SKNSHRA@1.21105, 0 0 0 0 ENSG00000231312.2 ENST00000443038.1 chr2:39664510-39743909 2 520 78877 intergenic -1.03 0 0,1,0 1 0,0,0 126.182692307692 14.073240615135 172.492 176.234615384615 17.5948882437212 279.666 174.701923076923 18.5241832219785 278.146 0 0 cow,dog,human,macaque,orangutan,panda,rabbit, processed_transcript retained_intron A549@0.946071,AG04450@1.05265,BJ@1.11326,GM12878@0.008443,H1HESC@0.405799,HELAS3@1.11485,HEPG2@2.38645,HMEC@0.362283,HSMM@2.24308,HUVEC@0.466658,K562@1.18121,MCF7@0.353649,NHEK@0.502913,NHLF@3.94134,SKNSHRA@1.21105, 0 0 0 0 ENSG00000231312.2 ENST00000422128.1 chr2:39664543-39811788 6 590 146645 intergenic -4.93 0 0,1,0 1 0,0,0 87.6745762711865 16.2458249514133 177.51 106.4 18.6161137440758 288.708 106.496610169492 20.5338606839647 287.32 0 0 chimp,cow,dog,human,macaque,marmoset,orangutan,pig, processed_transcript processed_transcript A549@0.946071,AG04450@1.05265,BJ@1.11326,GM12878@0.008443,H1HESC@0.405799,HELAS3@1.11485,HEPG2@2.38645,HMEC@0.362283,HSMM@2.24308,HUVEC@0.466658,K562@1.18121,MCF7@0.353649,NHEK@0.502913,NHLF@3.94134,SKNSHRA@1.21105, 0 0 0 0 ENSG00000231312.2 ENST00000449569.1 chr2:39664557-39828484 6 2511 161406 intergenic -0.97 0 0,1,0 1 0,0,0 11.7642373556352 16.7373145979703 177.51 16.8064516129032 19.43209050469 288.708 19.2134607726006 20.9809114902792 287.32 0 0 cat,chimp,cow,elephant,guinea_pig,horse,human,macaque,marmoset,orangutan,pig,rabbit,rat, processed_transcript processed_transcript A549@0.946071,AG04450@1.05265,BJ@1.11326,GM12878@0.008443,H1HESC@0.405799,HELAS3@1.11485,HEPG2@2.38645,HMEC@0.362283,HSMM@2.24308,HUVEC@0.466658,K562@1.18121,MCF7@0.353649,NHEK@0.502913,NHLF@3.94134,SKNSHRA@1.21105, 0 0 0 0 ENSG00000231312.2 ENST00000445520.1 chr2:39664572-39701899 4 495 36826 intergenic -1.43 0 1,1,1 1 0,0,0 14.2222222222222 10.722315755173 177.51 32.3878787878788 12.5493129853908 291.436 36.9030303030303 14.3236843534459 290.235 1 1 chimp,human,macaque,marmoset,orangutan, processed_transcript processed_transcript A549@0.946071,AG04450@1.05265,BJ@1.11326,GM12878@0.008443,H1HESC@0.405799,HELAS3@1.11485,HEPG2@2.38645,HMEC@0.362283,HSMM@2.24308,HUVEC@0.466658,K562@1.18121,MCF7@0.353649,NHEK@0.502913,NHLF@3.94134,SKNSHRA@1.21105, 0 0 0 0 ENSG00000231312.2 ENST00000366187.2 chr2:39680980-39681867 2 521 364 intergenic -3.98 0 0,0,1 0 0,0,0 13.5124760076775 0 0 45.9923224568138 14.5384615384615 4.14 57.1631477927063 15.8736263736264 7.251 0 1 chimp,human,orangutan, processed_transcript retained_intron A549@0.946071,AG04450@1.05265,BJ@1.11326,GM12878@0.008443,H1HESC@0.405799,HELAS3@1.11485,HEPG2@2.38645,HMEC@0.362283,HSMM@2.24308,HUVEC@0.466658,K562@1.18121,MCF7@0.353649,NHEK@0.502913,NHLF@3.94134,SKNSHRA@1.21105, 2 44 0 0 ENSG00000231312.2 ENST00000446698.1 chr2:39681063-39851496 5 588 169837 intergenic -4.93 1 0,0,1 0 0,0,0 127.459183673469 16.9995054081266 0 104.207482993197 19.8620971873031 4.14 108.397959183673 21.4236709315402 7.251 0 0 cat,chimp,cow,dog,guinea_pig,horse,human,macaque,marmoset,mouse,orangutan,panda,pig,rabbit, processed_transcript processed_transcript A549@0.946071,AG04450@1.05265,BJ@1.11326,GM12878@0.008443,H1HESC@0.405799,HELAS3@1.11485,HEPG2@2.38645,HMEC@0.362283,HSMM@2.24308,HUVEC@0.466658,K562@1.18121,MCF7@0.353649,NHEK@0.502913,NHLF@3.94134,SKNSHRA@1.21105, 0 0 0 0 ENSG00000231312.2 ENST00000438649.1 chr2:39741287-39826679 6 1895 83487 intergenic 3.34 0 0,0,1 0 0,0,0 67.6939313984169 17.9426257980284 64.668 71.9065963060686 19.9193886473343 90.97 61.0332453825857 22.2550576736498 83.274 0 0 cat,chimp,cow,elephant,horse,human,macaque,marmoset,panda, processed_transcript processed_transcript A549@0.946071,AG04450@1.05265,BJ@1.11326,GM12878@0.008443,H1HESC@0.405799,HELAS3@1.11485,HEPG2@2.38645,HMEC@0.362283,HSMM@2.24308,HUVEC@0.466658,K562@1.18121,MCF7@0.353649,NHEK@0.502913,NHLF@3.94134,SKNSHRA@1.21105, 0 0 0 0 ENSG00000231312.2 ENST00000425775.1 chr2:39744007-39826617 3 524 82082 intergenic -5.63 0 1,1,1 0 0,0,0 190.381679389313 17.3865768377963 100.703 159.414122137405 19.3077775882654 119.336 157.927480916031 21.4722594478692 122.798 0 0 chimp,cow,dog,elephant,guinea_pig,horse,human,macaque,marmoset,mouse,orangutan,pig,rabbit,rat, processed_transcript processed_transcript A549@0.946071,AG04450@1.05265,BJ@1.11326,GM12878@0.008443,H1HESC@0.405799,HELAS3@1.11485,HEPG2@2.38645,HMEC@0.362283,HSMM@2.24308,HUVEC@0.466658,K562@1.18121,MCF7@0.353649,NHEK@0.502913,NHLF@3.94134,SKNSHRA@1.21105, 0 0 0 0 ENSG00000231312.2 ENST00000415640.1 chr2:39745780-39892483 3 455 146244 intergenic 0 0 0,1,0 0 0,0,0 67.0197802197802 18.2966822570499 0 17.4593406593407 21.346803971445 4.519 23.3428571428571 23.6453051065343 7.623 0 0 cat,chimp,cow,dog,horse,human,macaque,marmoset,orangutan,panda,pig,rabbit, processed_transcript processed_transcript A549@0.946071,AG04450@1.05265,BJ@1.11326,GM12878@0.008443,H1HESC@0.405799,HELAS3@1.11485,HEPG2@2.38645,HMEC@0.362283,HSMM@2.24308,HUVEC@0.466658,K562@1.18121,MCF7@0.353649,NHEK@0.502913,NHLF@3.94134,SKNSHRA@1.21105, 0 0 0 0 ENSG00000231312.2 ENST00000451547.1 chr2:39745816-39826679 3 326 80533 intergenic 0 0 0,1,1 0 0,0,0 0 17.7209963617399 0 20.7453987730061 19.3768020562999 4.519 22.2177914110429 21.4994101796779 7.623 1 1 chimp,human,macaque,marmoset,orangutan, processed_transcript processed_transcript A549@0.946071,AG04450@1.05265,BJ@1.11326,GM12878@0.008443,H1HESC@0.405799,HELAS3@1.11485,HEPG2@2.38645,HMEC@0.362283,HSMM@2.24308,HUVEC@0.466658,K562@1.18121,MCF7@0.353649,NHEK@0.502913,NHLF@3.94134,SKNSHRA@1.21105, 0 0 0 0 ENSG00000227028.1 ENST00000418854.1 chr2:40146833-40332461 3 542 185082 intergenic 0.99 0 0,0,1 0 0,0,0 0 8.64842610302461 0 3.52767527675277 9.0200775872316 0 3.70479704797048 10.4788688257097 29.267 0 0 cat,chimp,cow,dog,elephant,guinea_pig,horse,human,macaque,marmoset,orangutan,panda,rabbit, processed_transcript processed_transcript A549@0.0069645,AG04450@0.136638,BJ@0.102007,GM12878@0,H1HESC@0.01399,HELAS3@0,HEPG2@0.002697,HMEC@0.005183,HSMM@0.470644,HUVEC@0,K562@0.004347,MCF7@0.0021505,NHEK@0.0659193,NHLF@0.097533,SKNSHRA@0.0152935, 0 0 0 0 ENSG00000227028.1 ENST00000439606.1 chr2:40269490-40332562 4 561 62505 intergenic -3.80 0 0,0,0 0 0,0,0 0 14.4853531717463 0 3.40819964349376 14.7011439084873 20.777 3.57932263814617 14.9773778097752 21.794 0 0 chimp,cow,guinea_pig,horse,human,macaque,marmoset,orangutan, processed_transcript processed_transcript A549@0.0069645,AG04450@0.136638,BJ@0.102007,GM12878@0,H1HESC@0.01399,HELAS3@0,HEPG2@0.002697,HMEC@0.005183,HSMM@0.470644,HUVEC@0,K562@0.004347,MCF7@0.0021505,NHEK@0.0659193,NHLF@0.097533,SKNSHRA@0.0152935, 0 0 0 0 ENSG00000227028.1 ENST00000444629.1 chr2:40332049-40482349 3 932 149364 intronic -2.66 1 0,1,1 0 0,0,0 22.0536480686695 23.3773800915883 19.584 24.1201716738197 22.8531172170001 19.627 25.3197424892704 24.5479633646662 24.256 0 0 cat,chimp,cow,dog,elephant,guinea_pig,horse,human,macaque,marmoset,mouse,orangutan,panda,pig,rabbit,rat, processed_transcript processed_transcript A549@0.0069645,AG04450@0.136638,BJ@0.102007,GM12878@0,H1HESC@0.01399,HELAS3@0,HEPG2@0.002697,HMEC@0.005183,HSMM@0.470644,HUVEC@0,K562@0.004347,MCF7@0.0021505,NHEK@0.0659193,NHLF@0.097533,SKNSHRA@0.0152935, 0 0 0 0 ENSG00000227028.1 ENST00000435515.1 chr2:40342169-40481718 4 493 139050 exonic 2.19 0 0,0,0 0 0,0,0 109.26369168357 20.827594390507 166.692 118.233265720081 20.789866954333 167.17 127.539553752535 22.7215462064006 139.024 0 0 cat,chimp,cow,dog,elephant,guinea_pig,horse,human,macaque,marmoset,mouse,opossum,orangutan,pig,rabbit,rat, processed_transcript processed_transcript A549@0.0069645,AG04450@0.136638,BJ@0.102007,GM12878@0,H1HESC@0.01399,HELAS3@0,HEPG2@0.002697,HMEC@0.005183,HSMM@0.470644,HUVEC@0,K562@0.004347,MCF7@0.0021505,NHEK@0.0659193,NHLF@0.097533,SKNSHRA@0.0152935, 0 0 0 0 ENSG00000227028.1 ENST00000427354.1 chr2:40437105-40482198 3 787 44302 intronic -2.66 0 0,0,0 0 0,0,0 0 12.8779287616812 0 13.0368487928844 14.4668186537854 1.673 18.9148665819568 16.413728499842 1.757 0 0 cat,chimp,cow,dog,elephant,horse,human,macaque,marmoset,mouse,orangutan,panda,pig,rabbit, processed_transcript processed_transcript A549@0.0069645,AG04450@0.136638,BJ@0.102007,GM12878@0,H1HESC@0.01399,HELAS3@0,HEPG2@0.002697,HMEC@0.005183,HSMM@0.470644,HUVEC@0,K562@0.004347,MCF7@0.0021505,NHEK@0.0659193,NHLF@0.097533,SKNSHRA@0.0152935, 0 0 0 0 ENSG00000227028.1 ENST00000413479.1 chr2:40447283-40481903 4 796 33818 intronic 2.19 0 0,0,0 0 0,0,0 0 13.9456798154829 0 2.40201005025126 13.7819504405938 2.04 9.86934673366834 15.8493701579041 2.072 0 0 cat,chimp,cow,dog,elephant,guinea_pig,horse,human,macaque,marmoset,mouse,orangutan,panda,pig,rabbit,rat, processed_transcript processed_transcript A549@0.0069645,AG04450@0.136638,BJ@0.102007,GM12878@0,H1HESC@0.01399,HELAS3@0,HEPG2@0.002697,HMEC@0.005183,HSMM@0.470644,HUVEC@0,K562@0.004347,MCF7@0.0021505,NHEK@0.0659193,NHLF@0.097533,SKNSHRA@0.0152935, 0 0 0 0 ENSG00000227028.1 ENST00000417875.1 chr2:40478563-40481686 3 341 2778 intronic 0.54 0 0,1,0 0 0,0,0 61.2434017595308 0 105.782 7.11143695014663 0 99.515 7.58064516129032 0 100.879 0 0 cat,chimp,cow,dog,elephant,guinea_pig,horse,human,macaque,marmoset,orangutan,pig, processed_transcript processed_transcript A549@0.0069645,AG04450@0.136638,BJ@0.102007,GM12878@0,H1HESC@0.01399,HELAS3@0,HEPG2@0.002697,HMEC@0.005183,HSMM@0.470644,HUVEC@0,K562@0.004347,MCF7@0.0021505,NHEK@0.0659193,NHLF@0.097533,SKNSHRA@0.0152935, 0 0 0 0 ENSG00000233128.1 ENST00000420187.1 chr2:40973627-40994592 4 545 20414 intergenic -5.44 0 0,0,0 0 0,0,0 0 0.3378563730773 0 0 1.96218281571471 0 0 2.39100617223474 0 0 0 chimp,dog,elephant,horse,human,macaque,marmoset,orangutan,panda,pig,rabbit, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0.019337,HEPG2@0.015642,HMEC@0,HSMM@0.0469965,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000241522.1 ENST00000431359.1 chr2:41370920-41383954 3 527 12503 intergenic -6.06 0 0,0,0 0 0,0,0 34.168880455408 3.8585139566504 54.9 5.48956356736243 4.23178437175078 49.172 206.595825426945 6.5069183395985 49.679 0 0 cat,chimp,cow,dog,elephant,guinea_pig,horse,human,macaque,marmoset,mouse,opossum,orangutan,panda,pig,rabbit,rat, processed_transcript processed_transcript A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0.004381,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000214691.6 ENST00000418836.2 chr2:42104214-42105095 2 532 347 intergenic 0.81 0 0,0,0 0 0,0,0 0 381.5734870317 0 32.5338345864662 475.798270893372 4.392 35.1860902255639 495.187319884726 8.134 0 0 cat,chimp,dog,guinea_pig,human,macaque,marmoset,orangutan,rabbit,rat, lincRNA lincRNA A549@0.101917,AG04450@0.014116,BJ@0,GM12878@0.001118,H1HESC@0,HELAS3@2.02266,HEPG2@0.383792,HMEC@0,HSMM@0.012317,HUVEC@0.001481,K562@0.001288,MCF7@0,NHEK@0,NHLF@0.007563,SKNSHRA@0, 0 0 0 0 ENSG00000214691.6 ENST00000398796.2 chr2:42104695-42121179 3 1800 14680 intergenic 4.64 1 0,0,0 0 0,0,0 74.4622222222222 17.6779972752044 86.996 166.572222222222 21.4385558583106 137.994 166.825555555556 22.900340599455 152.525 0 0 cat,cow,dog,elephant,human,macaque,marmoset,mouse,orangutan, lincRNA lincRNA A549@0.101917,AG04450@0.014116,BJ@0,GM12878@0.001118,H1HESC@0,HELAS3@2.02266,HEPG2@0.383792,HMEC@0,HSMM@0.012317,HUVEC@0.001481,K562@0.001288,MCF7@0,NHEK@0,NHLF@0.007563,SKNSHRA@0, 0 0 0 0 ENSG00000214691.6 ENST00000442214.1 chr2:42104696-42120186 2 739 14749 intergenic 4.64 0 0,0,0 0 0,0,0 60.1542625169147 17.5952945962438 87.474 71.978349120433 21.3382602210319 138.64 68.3978349120433 22.7932063190725 153.193 0 0 cat,chimp,cow,dog,elephant,horse,human,macaque,marmoset,orangutan,panda,rabbit, lincRNA lincRNA A549@0.101917,AG04450@0.014116,BJ@0,GM12878@0.001118,H1HESC@0,HELAS3@2.02266,HEPG2@0.383792,HMEC@0,HSMM@0.012317,HUVEC@0.001481,K562@0.001288,MCF7@0,NHEK@0,NHLF@0.007563,SKNSHRA@0, 0 0 0 0 ENSG00000234362.1 ENST00000427054.1 chr2:42158739-42160605 4 636 1224 intergenic 6.25 1 0,0,1 0 0,0,0 129.169811320755 106.066176470588 8.36 188.172955974843 127.531045751634 35.205 193.707547169811 131.024509803922 38.539 0 0 cat,chimp,cow,dog,elephant,guinea_pig,horse,human,macaque,orangutan,panda,pig,rabbit, lincRNA lincRNA A549@0.353967,AG04450@0.449319,BJ@0,GM12878@0.0855985,H1HESC@0.0153835,HELAS3@2.11522,HEPG2@0.117055,HMEC@0,HSMM@0.255673,HUVEC@0,K562@0.011513,MCF7@0,NHEK@0,NHLF@0.329427,SKNSHRA@0.169919, 0 0 0 0 ENSG00000234362.1 ENST00000436551.1 chr2:42158759-42160863 3 766 1334 intergenic 6.25 1 0,0,1 0 0,0,0 52.8250652741514 129.149175412294 77.807 90.4007832898172 155.484257871064 83.612 94.5391644908616 158.946026986507 85.672 0 0 cat,chimp,dog,elephant,horse,human,macaque,marmoset,orangutan,panda,pig, lincRNA lincRNA A549@0.353967,AG04450@0.449319,BJ@0,GM12878@0.0855985,H1HESC@0.0153835,HELAS3@2.11522,HEPG2@0.117055,HMEC@0,HSMM@0.255673,HUVEC@0,K562@0.011513,MCF7@0,NHEK@0,NHLF@0.329427,SKNSHRA@0.169919, 0 0 0 0 ENSG00000226398.1 ENST00000451514.1 chr2:42242765-42252442 3 343 9330 intergenic 2.01 0 0,0,0 0 0,0,0 206.775510204082 5.76977491961415 50.456 189.795918367347 9.39131832797428 28.441 179.845481049563 9.94726688102894 37.912 0 0 chimp,cow,dog,human,macaque,marmoset,mouse,orangutan,panda,pig,rabbit, antisense antisense A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0.030679, 0 0 0 0 ENSG00000224875.2 ENST00000422013.2 chr2:42370378-42397371 4 653 26334 intronic 0.09 0 0,1,0 0 0,0,0 51.5053598774885 8.85923141186299 118.252 84.95865237366 16.8539150907572 170.778 101.600306278714 17.7973722184249 158.979 0 0 cat,chimp,dog,elephant,horse,human,macaque,marmoset,orangutan,pig, antisense antisense A549@0,AG04450@0.012181,BJ@0.0234795,GM12878@0.118127,H1HESC@0,HELAS3@0.0560095,HEPG2@0.169167,HMEC@0,HSMM@0.0037275,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0.0064655,SKNSHRA@0, 0 0 0 0 ENSG00000224875.2 ENST00000458490.1 chr2:42396586-42397441 2 550 303 exonic -0.51 0 0,0,1 0 0,0,0 99.1690909090909 11.7161716171617 115.501 122.129090909091 108.333333333333 164.834 112.68 65.1287128712871 153.179 0 0 chimp,cow,dog,elephant,guinea_pig,horse,human,macaque,marmoset,mouse,panda,pig,rabbit,rat, antisense antisense A549@0,AG04450@0.012181,BJ@0.0234795,GM12878@0.118127,H1HESC@0,HELAS3@0.0560095,HEPG2@0.169167,HMEC@0,HSMM@0.0037275,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0.0064655,SKNSHRA@0, 0 0 0 0 ENSG00000225810.2 ENST00000423797.2 chr2:42592810-42652228 5 806 58604 intronic 4.81 0 0,1,0 0 0,0,0 0 16.6867359257307 37.962 0 13.8344073589172 39.513 10.5475792988314 21.2796830632683 38.94 0 0 chimp,cow,dog,elephant,horse,human,macaque,marmoset,panda,rabbit, processed_transcript processed_transcript A549@0.053336,AG04450@0,BJ@0,GM12878@0,H1HESC@0.474737,HELAS3@0.0695605,HEPG2@0.046451,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0.014899, 0 0 0 0 ENSG00000224739.2 ENST00000457457.2 chr2:43228495-43233200 3 234 4467 intergenic -3.91 0 0,1,0 0 0,0,0 0 28.8929930602194 0 0 30.7700917841952 0 0 32.7389747033804 0 0 0 cat,chimp,dog,horse,human,macaque,marmoset,mouse,orangutan,panda,rat, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0.0181705,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0.06033,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000231826.1 ENST00000422351.1 chr2:43254992-43266682 6 2150 9530 intergenic 1.92 0 1,1,1 1 0,0,0 0 14.0324239244491 0 4.71767441860465 16.6320041972718 7.297 4.95674418604651 17.8614900314795 7.647 0 0 chimp,human,macaque,orangutan, lincRNA processed_transcript A549@0.0020135,AG04450@0.0028515,BJ@0.0288525,GM12878@0,H1HESC@0,HELAS3@0.0668295,HEPG2@0.115451,HMEC@16.1983,HSMM@0,HUVEC@0,K562@0.016482,MCF7@0.0600795,NHEK@11.5198,NHLF@0.047464,SKNSHRA@0.0336785, 0 0 0 0 ENSG00000231826.1 ENST00000449766.1 chr2:43259640-43266686 4 799 6241 intergenic 1.54 0 1,1,1 1 0,0,0 43.1827284105131 7.38663675692998 0 73.450563204005 9.91331517385034 6.341 78.1602002503129 10.3851946803397 6.611 0 0 cat,chimp,horse,human,macaque,marmoset,mouse,orangutan, lincRNA processed_transcript A549@0.0020135,AG04450@0.0028515,BJ@0.0288525,GM12878@0,H1HESC@0,HELAS3@0.0668295,HEPG2@0.115451,HMEC@16.1983,HSMM@0,HUVEC@0,K562@0.016482,MCF7@0.0600795,NHEK@11.5198,NHLF@0.047464,SKNSHRA@0.0336785, 0 0 0 0 ENSG00000231826.1 ENST00000425212.1 chr2:43260372-43266680 3 783 5521 intergenic 1.54 0 1,1,1 1 0,0,0 0 5.12370947292157 0 6.80715197956577 4.87429813439594 7.775 7.19540229885058 5.50479985509871 8.165 0 0 cat,chimp,cow,elephant,horse,human,macaque,marmoset,orangutan,pig, lincRNA processed_transcript A549@0.0020135,AG04450@0.0028515,BJ@0.0288525,GM12878@0,H1HESC@0,HELAS3@0.0668295,HEPG2@0.115451,HMEC@16.1983,HSMM@0,HUVEC@0,K562@0.016482,MCF7@0.0600795,NHEK@11.5198,NHLF@0.047464,SKNSHRA@0.0336785, 0 0 0 0 ENSG00000233978.1 ENST00000438736.1 chr2:43268332-43270921 2 567 2020 intergenic 3.96 0 0,1,0 0 0,0,0 0 44.3821782178218 26.985 0 40.0678217821782 6.446 0 39.0940594059406 9.301 0 0 chimp,elephant,horse,human,macaque,marmoset,orangutan,panda,pig, lincRNA lincRNA A549@0.0218215,AG04450@0.085102,BJ@0.004327,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0.047939,HMEC@0.115139,HSMM@0,HUVEC@0.012285,K562@0.0286565,MCF7@0.040613,NHEK@0.397954,NHLF@0,SKNSHRA@0.0882095, 0 0 0 0 ENSG00000230587.1 ENST00000434020.1 chr2:43324884-43329829 2 950 3993 intergenic -0.03 0 0,0,1 0 0,0,0 112.902105263158 107.675181567744 0 59.1336842105263 71.0285499624343 5.683 62.5568421052632 64.0851490107688 8.029 0 0 chimp,cow,dog,guinea_pig,human,macaque,marmoset,orangutan,panda, lincRNA lincRNA A549@0.0122665,AG04450@0.195974,BJ@0.0307915,GM12878@0.0406335,H1HESC@0.025354,HELAS3@0.079258,HEPG2@0.141163,HMEC@0.375376,HSMM@0.0703555,HUVEC@0,K562@0.002439,MCF7@0.005845,NHEK@0.109574,NHLF@0.12614,SKNSHRA@0.055842, 0 0 0 0 ENSG00000234936.1 ENST00000423354.1 chr2:43456712-43460533 3 395 3422 exonic -3.95 0 0,0,1 0 0,0,0 94.420253164557 41.9666861484512 68.075 108.475949367089 40.6841028638223 80.434 119.769620253165 45.8533021624781 82.411 0 0 chimp,cow,dog,human,macaque,marmoset,orangutan,panda,rabbit,rat, antisense antisense A549@0.76741,AG04450@0.099461,BJ@0.29115,GM12878@1.53908,H1HESC@1.68174,HELAS3@0.566113,HEPG2@1.00587,HMEC@0.133744,HSMM@0.0103395,HUVEC@0.261545,K562@0.566337,MCF7@4.78545,NHEK@0.07201,NHLF@0.0097505,SKNSHRA@1.23584, 0 0 0 0 ENSG00000238204.1 ENST00000437916.1 chr2:45150486-45166338 2 608 15242 intergenic 0 0 0,1,0 0 0,0,0 49.2516447368421 111.610812229366 339.536 26.5460526315789 110.082338275817 313.431 24.3585526315789 107.014433801338 316.63 0 0 cat,chimp,cow,dog,guinea_pig,horse,human,macaque,marmoset,orangutan,rabbit, processed_transcript processed_transcript A549@2.13643,AG04450@0,BJ@0.0016945,GM12878@0.004373,H1HESC@0.0625645,HELAS3@0,HEPG2@0.0037545,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0.061513,NHEK@0,NHLF@0,SKNSHRA@1.85838, 0 0 0 0 ENSG00000238204.1 ENST00000430847.1 chr2:45157003-45162790 2 754 5031 intergenic 4.18 0 0,1,1 0 0,0,0 231.185676392573 53.9407672430928 205.088 281.291777188329 54.3190220632081 169.118 286.366047745358 49.80063605645 142.749 0 0 cow,dog,elephant,guinea_pig,horse,human,macaque,marmoset,mouse,orangutan,panda,rabbit,rat, processed_transcript processed_transcript A549@2.13643,AG04450@0,BJ@0.0016945,GM12878@0.004373,H1HESC@0.0625645,HELAS3@0,HEPG2@0.0037545,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0.061513,NHEK@0,NHLF@0,SKNSHRA@1.85838, 0 0 0 0 ENSG00000238204.1 ENST00000444871.1 chr2:45158316-45162578 2 459 3801 intergenic 4.52 0 0,1,1 0 0,0,0 76.3616557734205 52.5730071033938 229.408 58.8322440087146 64.5295974743488 205.214 53.5904139433551 58.4959221257564 174.546 0 0 cow,dog,elephant,guinea_pig,horse,human,macaque,marmoset,orangutan,panda,rabbit, processed_transcript processed_transcript A549@2.13643,AG04450@0,BJ@0.0016945,GM12878@0.004373,H1HESC@0.0625645,HELAS3@0,HEPG2@0.0037545,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0.061513,NHEK@0,NHLF@0,SKNSHRA@1.85838, 0 0 0 0 ENSG00000236502.1 ENST00000419364.1 chr2:45167293-45169012 2 842 875 exonic 1.50 1 0,1,0 0 0,0,0 357.535629453682 188.230857142857 435.972 362.739904988123 188.988571428571 662.496 387.603325415677 239.776 786.046 0 0 cat,chimp,dog,guinea_pig,horse,human,macaque,marmoset,mouse,orangutan,panda,rat, antisense antisense A549@0.0270735,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0.597847, 0 0 0 0 ENSG00000236502.1 ENST00000456467.1 chr2:45167723-45168633 2 555 353 intergenic -1.39 0 0,1,0 0 0,0,0 24.9477477477477 92.1303116147309 569.196 60.6396396396396 67.1133144475921 640.796 95.0576576576577 86.1444759206799 742.732 0 0 cat,chimp,cow,guinea_pig,horse,human,macaque,marmoset,orangutan,panda,rabbit, antisense antisense A549@0.0270735,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0.597847, 0 0 0 0 ENSG00000225156.1 ENST00000425325.1 chr2:45181803-45195897 4 2677 11411 intergenic 2.90 1 0,0,0 0 0,0,0 4.82106836010459 13.3534309000088 0 4.0560328726186 18.9351502935764 0 4.7728800896526 33.0653755148541 0 0 0 chimp,human,macaque,marmoset,orangutan, lincRNA lincRNA A549@0.0150415,AG04450@0,BJ@0,GM12878@0.0264945,H1HESC@0.028395,HELAS3@0.005057,HEPG2@0.003179,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0.006135,NHEK@0,NHLF@0,SKNSHRA@0.891058, 0 0 0 0 ENSG00000231156.1 ENST00000423433.1 chr2:45240353-45240807 2 365 87 intergenic 0 0 0,1,1 0 0,0,0 0 0 0 0 42.3218390804598 13.992 0 43.7701149425287 17.58 0 0 chimp,cow,elephant,human,macaque,marmoset,orangutan,pig, lincRNA lincRNA A549@0.0902335,AG04450@0,BJ@0.0067085,GM12878@0,H1HESC@0.148538,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0.379747,HUVEC@0.032436,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0.012364, 0 0 0 0 ENSG00000205054.2 ENST00000427020.1 chr2:45392009-45419404 5 717 26670 intergenic 0.56 0 0,0,1 0 0,0,0 95.0251046025105 58.3482564679415 35.836 71.1910739191074 69.4440569928759 41.104 81.0153417015342 68.7236220472441 48.797 0 0 chimp,cow,dog,guinea_pig,horse,human,macaque,marmoset,mouse,orangutan,panda,pig,rabbit, lincRNA lincRNA A549@0.0054245,AG04450@0.01114,BJ@0.00341,GM12878@0.002792,H1HESC@0,HELAS3@0.003237,HEPG2@0,HMEC@0,HSMM@6.91166,HUVEC@0.0560915,K562@0.0256685,MCF7@0.028759,NHEK@0,NHLF@0.005345,SKNSHRA@0.00204, 0 0 0 0 ENSG00000231054.1 ENST00000442821.1 chr2:45395722-45396553 2 551 278 intergenic 9.93 0 0,0,1 0 0,0,0 0 0 58.189 0 8.92086330935252 104.571 0 0 89.994 0 0 chimp,cow,elephant,guinea_pig,human,macaque,marmoset,orangutan,panda, lincRNA lincRNA A549@0.04853,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0.012971,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000205054.2 ENST00000413669.1 chr2:45401481-45402350 2 341 526 intergenic 0 1 0,0,1 0 0,0,0 127.812316715543 26.7566539923954 59.387 172.293255131965 25.3250950570342 27.857 169.478005865103 24.7794676806084 28.677 0 0 chimp,elephant,human,macaque,marmoset,orangutan,pig, lincRNA lincRNA A549@0.0054245,AG04450@0.01114,BJ@0.00341,GM12878@0.002792,H1HESC@0,HELAS3@0.003237,HEPG2@0,HMEC@0,HSMM@6.91166,HUVEC@0.0560915,K562@0.0256685,MCF7@0.028759,NHEK@0,NHLF@0.005345,SKNSHRA@0.00204, 0 0 0 0 ENSG00000205054.2 ENST00000378479.1 chr2:45401483-45482080 6 1089 79498 intergenic -3.12 1 0,0,1 0 0,0,0 89.684113865932 18.3961483307756 96.516 118.676767676768 20.1018013031774 106.966 136.172635445363 22.4518478452288 121.733 0 0 chimp,elephant,horse,human,macaque,marmoset,orangutan,panda,pig, lincRNA lincRNA A549@0.0054245,AG04450@0.01114,BJ@0.00341,GM12878@0.002792,H1HESC@0,HELAS3@0.003237,HEPG2@0,HMEC@0,HSMM@6.91166,HUVEC@0.0560915,K562@0.0256685,MCF7@0.028759,NHEK@0,NHLF@0.005345,SKNSHRA@0.00204, 0 0 0 0 ENSG00000205054.2 ENST00000454673.1 chr2:45414309-45419424 2 2224 2889 intergenic 6.10 0 0,0,0 0 0,0,0 17.1227517985612 114.823122187608 29.096 18.7715827338129 171.443752163378 31.564 23.1407374100719 193.515057113188 38.157 0 0 cat,chimp,dog,elephant,horse,human,macaque,marmoset,orangutan,panda,pig, lincRNA retained_intron A549@0.0054245,AG04450@0.01114,BJ@0.00341,GM12878@0.002792,H1HESC@0,HELAS3@0.003237,HEPG2@0,HMEC@0,HSMM@6.91166,HUVEC@0.0560915,K562@0.0256685,MCF7@0.028759,NHEK@0,NHLF@0.005345,SKNSHRA@0.00204, 0 0 0 0 ENSG00000205054.2 ENST00000430650.1 chr2:45419318-45550434 3 718 130394 intergenic 4.91 0 0,0,0 0 0,0,0 77.7298050139276 25.2796677761247 0 59.7910863509749 27.4171664340384 0 69.6128133704735 28.7136524686719 0 0 0 chimp,cow,dog,elephant,guinea_pig,horse,human,macaque,marmoset,mouse,orangutan,pig,rabbit,rat, lincRNA lincRNA A549@0.0054245,AG04450@0.01114,BJ@0.00341,GM12878@0.002792,H1HESC@0,HELAS3@0.003237,HEPG2@0,HMEC@0,HSMM@6.91166,HUVEC@0.0560915,K562@0.0256685,MCF7@0.028759,NHEK@0,NHLF@0.005345,SKNSHRA@0.00204, 0 0 0 0 ENSG00000228481.1 ENST00000423120.1 chr2:45901840-45902615 2 372 401 intronic -6.46 0 0,0,0 0 0,0,0 30.1559139784946 10.7281795511222 29.68 50.3467741935484 0 68.054 49.739247311828 0 67.804 0 0 cat,chimp,cow,dog,elephant,guinea_pig,horse,human,macaque,marmoset,orangutan,panda,pig, antisense antisense A549@0.0165995,AG04450@0,BJ@0.038266,GM12878@0.0078195,H1HESC@0,HELAS3@0,HEPG2@0.0072935,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0.092528,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000232696.1 ENST00000444077.1 chr2:46305154-46305967 2 462 349 intronic 0 0 0,0,0 0 0,0,0 0 0 0 0 0 45.933 0 0 51.481 0 0 chimp,human,macaque,marmoset,orangutan,rabbit, antisense antisense A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0.0088625,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000231336.1 ENST00000450080.1 chr2:46393928-46395117 2 362 825 intronic 0 0 0,0,0 0 0,0,0 0 0 0 0 5.87272727272727 1.912 0 5.96484848484848 2.008 0 0 chimp,cow,dog,human,macaque,marmoset,orangutan, antisense antisense A549@0,AG04450@0,BJ@0,GM12878@0.005538,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0.022498,HSMM@0,HUVEC@0.028805,K562@0.0318945,MCF7@0.0056485,NHEK@0.0716427,NHLF@0,SKNSHRA@0.0311975, 1 96 0 0 ENSG00000228100.1 ENST00000418415.1 chr2:46619436-46621306 3 567 1299 intergenic -0.37 0 0,0,1 0 0,0,0 0 0 0 3.14814814814815 15.626635873749 0 3.19753086419753 15.6843725943033 0 0 0 chimp,human,macaque,marmoset,orangutan,rabbit, lincRNA lincRNA A549@0.008654,AG04450@0.0051935,BJ@0.025108,GM12878@0,H1HESC@0.041328,HELAS3@0.315493,HEPG2@0.278407,HMEC@0,HSMM@0,HUVEC@0.0085315,K562@0.487054,MCF7@0.025069,NHEK@0,NHLF@0,SKNSHRA@0.0401685, 0 0 0 0 ENSG00000253515.1 ENST00000517716.1 chr2:46726870-46728417 2 397 1148 intergenic -31.10 0 0,1,0 0 0,0,0 0 17.3371080139373 14.74 0 32.7108013937282 19.236 0 42.8719512195122 20.216 1 1 chimp,human,macaque,marmoset,orangutan, antisense antisense A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0.0066515,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0.0061555,MCF7@0.070351,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000250116.2 ENST00000506009.2 chr2:46795395-46807377 2 1517 10463 intronic 3.87 0 0,1,0 0 0,0,0 97.2148978246539 25.4325719200994 237.658 68.0705339485827 25.0717767370735 179.018 68.2933421226104 25.1641976488579 163.243 0 0 chimp,cow,dog,horse,human,marmoset,orangutan,panda, antisense antisense A549@0.011727,AG04450@0.0108965,BJ@0.004711,GM12878@0.0780245,H1HESC@0.003913,HELAS3@0,HEPG2@0.0028055,HMEC@0,HSMM@0,HUVEC@0.027869,K562@0.014228,MCF7@0.002707,NHEK@0.00561433,NHLF@0,SKNSHRA@0.0205105, 0 0 0 0 ENSG00000226548.1 ENST00000453936.1 chr2:47079159-47080635 2 650 824 intronic -2.66 0 0,0,0 0 0,0,0 0 0 0 0 0 0 0 0 0 0 0 chimp,human,macaque,marmoset,orangutan, antisense antisense A549@0.0363715,AG04450@0.036931,BJ@0.100294,GM12878@0.00719,H1HESC@0.041748,HELAS3@0.034894,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0.012858,K562@0,MCF7@0.0373525,NHEK@0,NHLF@0.047583,SKNSHRA@0.0361135, 1 96 0 0 ENSG00000228925.1 ENST00000429761.1 chr2:47126414-47135817 2 1833 7568 exonic 5.72 0 0,1,0 0 0,0,0 39.3682487725041 15.4116014799154 0 56.4582651391162 23.2474894291755 0 58.2247681396618 25.0422832980973 0 0 0 chimp,human,macaque,marmoset,orangutan, lincRNA processed_transcript A549@0,AG04450@0.0032265,BJ@0.0176355,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0.0213775,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0.002241,NHEK@0,NHLF@0.002103,SKNSHRA@0.0087945, 0 0 0 0 ENSG00000233845.1 ENST00000422201.1 chr2:47262418-47267663 2 502 4741 intronic 3.65 0 0,1,1 0 0,0,0 48.7490039840637 8.85551571398439 0 52.4820717131474 15.923222948745 0 52.8227091633466 16.1626239190044 0 0 0 cat,chimp,cow,dog,elephant,horse,human,macaque,marmoset,orangutan,rat, antisense antisense A549@0,AG04450@0,BJ@0.00977,GM12878@0,H1HESC@0.0098195,HELAS3@0.0579735,HEPG2@0.413898,HMEC@0.016249,HSMM@0.009046,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0.0308855,SKNSHRA@0.0376915, 0 0 0 0 ENSG00000225187.1 ENST00000421759.1 chr2:47294961-47298343 2 858 2522 intronic -1.35 0 0,0,1 0 0,0,0 19.5804195804196 15.906026962728 0 22.5081585081585 32.1185567010309 0 21.7121212121212 28.2989690721649 0 0 0 cat,chimp,cow,guinea_pig,human,macaque,marmoset,orangutan,panda,rabbit,rat, antisense antisense A549@0.324022,AG04450@0.154501,BJ@0.369369,GM12878@0.495311,H1HESC@0.110218,HELAS3@0.511964,HEPG2@0.598051,HMEC@0.014578,HSMM@0.055153,HUVEC@0.15836,K562@0.088341,MCF7@0.186105,NHEK@0.122884,NHLF@0.0072025,SKNSHRA@0.200703, 0 0 0 0 ENSG00000234690.2 ENST00000448713.1 chr2:47419544-47572128 3 574 152006 intergenic -0.02 0 0,1,0 1 0,0,0 47.7595818815331 14.1066668420983 23.506 16.1550522648084 13.444752180835 32.342 30.5365853658537 14.4743957475363 33.384 0 0 cat,chimp,cow,dog,elephant,guinea_pig,horse,human,macaque,marmoset,mouse,orangutan,panda,pig,rabbit, lincRNA processed_transcript A549@1.07697,AG04450@0.0801275,BJ@0.080388,GM12878@0.0396335,H1HESC@0.841886,HELAS3@0.595145,HEPG2@2.45755,HMEC@0,HSMM@0.144852,HUVEC@1.19118,K562@0.090611,MCF7@0.255893,NHEK@0,NHLF@0.050338,SKNSHRA@4.02584, 0 0 0 0 ENSG00000234690.2 ENST00000441997.1 chr2:47419863-47572213 5 599 151743 intergenic 0.85 0 0,1,1 1 0,0,0 45.7662771285476 14.1311164271169 23.506 15.4808013355593 13.4680545395834 32.342 29.2621035058431 14.4994826779489 33.384 0 0 cat,chimp,cow,dog,elephant,guinea_pig,horse,human,macaque,marmoset,orangutan,pig,rabbit,rat, lincRNA processed_transcript A549@1.07697,AG04450@0.0801275,BJ@0.080388,GM12878@0.0396335,H1HESC@0.841886,HELAS3@0.595145,HEPG2@2.45755,HMEC@0,HSMM@0.144852,HUVEC@1.19118,K562@0.090611,MCF7@0.255893,NHEK@0,NHLF@0.050338,SKNSHRA@4.02584, 0 0 0 0 ENSG00000234690.2 ENST00000419035.1 chr2:47441088-47572105 3 1889 129124 intergenic 4.84 0 0,1,0 1 0,0,0 3.64637374272102 11.4928440878535 23.506 21.275277924828 11.9370062885289 32.342 24.3869772366331 12.70968216598 33.384 0 0 chimp,cow,dog,human,macaque,marmoset,orangutan,panda,pig, lincRNA processed_transcript A549@1.07697,AG04450@0.0801275,BJ@0.080388,GM12878@0.0396335,H1HESC@0.841886,HELAS3@0.595145,HEPG2@2.45755,HMEC@0,HSMM@0.144852,HUVEC@1.19118,K562@0.090611,MCF7@0.255893,NHEK@0,NHLF@0.050338,SKNSHRA@4.02584, 0 0 0 0 ENSG00000226087.1 ENST00000444361.1 chr2:47452933-47466346 2 559 12852 intergenic 3.00 0 0,1,0 0 0,0,0 0 35.1699346405229 27.804 24.2737030411449 30.7062713974479 33.195 25.5742397137746 30.8671023965142 40.778 0 0 cat,chimp,cow,dog,elephant,horse,human,macaque,marmoset,mouse,orangutan,panda,pig,rabbit,rat, lincRNA lincRNA A549@0,AG04450@0.289753,BJ@0.0234465,GM12878@0,H1HESC@0,HELAS3@0.004731,HEPG2@0,HMEC@0,HSMM@2.05865,HUVEC@0,K562@0,MCF7@0.003584,NHEK@0,NHLF@0.966902,SKNSHRA@0.0828735, 0 0 0 0 ENSG00000226087.1 ENST00000426892.1 chr2:47454056-47466364 2 589 11717 intergenic 3.00 0 0,1,0 0 0,0,0 55.1239388794567 31.7688828198344 46.456 99.5059422750424 26.2126824272425 42.649 87.6095076400679 26.366476060425 49.485 0 0 cat,chimp,cow,dog,elephant,horse,human,macaque,marmoset,mouse,orangutan,panda,pig,rabbit,rat, lincRNA lincRNA A549@0,AG04450@0.289753,BJ@0.0234465,GM12878@0,H1HESC@0,HELAS3@0.004731,HEPG2@0,HMEC@0,HSMM@2.05865,HUVEC@0,K562@0,MCF7@0.003584,NHEK@0,NHLF@0.966902,SKNSHRA@0.0828735, 0 0 0 0 ENSG00000234690.2 ENST00000450550.1 chr2:47550560-47572128 4 389 21173 intergenic 0.85 0 0,1,1 1 0,0,0 17.706940874036 2.63070892173995 23.506 8.37532133676093 3.08690313134653 32.342 22.3958868894602 3.60808576961224 33.384 0 0 chimp,human,macaque,marmoset,orangutan, lincRNA processed_transcript A549@1.07697,AG04450@0.0801275,BJ@0.080388,GM12878@0.0396335,H1HESC@0.841886,HELAS3@0.595145,HEPG2@2.45755,HMEC@0,HSMM@0.144852,HUVEC@1.19118,K562@0.090611,MCF7@0.255893,NHEK@0,NHLF@0.050338,SKNSHRA@4.02584, 0 0 0 0 ENSG00000236824.1 ENST00000418539.1 chr2:47558199-47571656 1 13457 0 intergenic 1.64 0 0,0,0 0 0,0,0 2.43293453221372 0 0 2.81310841940997 0 0 3.57249015382329 0 0 0 0 chimp,human, lincRNA non_coding A549@1.11961,AG04450@2.96805,BJ@1.39833,GM12878@0.022924,H1HESC@0.0248505,HELAS3@0.210805,HEPG2@0.057194,HMEC@2.55701,HSMM@0.353004,HUVEC@0.0924415,K562@0.360135,MCF7@0.076866,NHEK@0.262025,NHLF@0.304933,SKNSHRA@0.0569485, 0 0 0 0 ENSG00000234690.2 ENST00000413185.2 chr2:47558519-47572128 4 1042 12561 intergenic 0.85 0 0,1,1 1 0,0,0 6.61036468330134 4.43436032163044 23.506 3.12667946257198 3.9941883607993 32.342 8.36084452975048 4.84547408645808 33.384 1 1 chimp,human,macaque,marmoset,orangutan, lincRNA processed_transcript A549@1.07697,AG04450@0.0801275,BJ@0.080388,GM12878@0.0396335,H1HESC@0.841886,HELAS3@0.595145,HEPG2@2.45755,HMEC@0,HSMM@0.144852,HUVEC@1.19118,K562@0.090611,MCF7@0.255893,NHEK@0,NHLF@0.050338,SKNSHRA@4.02584, 0 0 0 0 ENSG00000236558.2 ENST00000449451.2 chr2:47713153-47715691 2 2005 531 intronic -1.32 0 0,0,0 0 0,0,0 112.036834245893 0 0 76.9377799900448 0 7.662 80.351418616227 0 13.557 0 0 chimp,elephant,human,macaque,marmoset,orangutan,rabbit, antisense antisense A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000235760.3 ENST00000435331.3 chr2:47754676-47756303 3 431 1192 intronic 6.51 0 0,0,0 0 0,0,0 0 136.872483221477 0 0 79.1501677852349 0 0 77.9572147651007 0 0 0 chimp,elephant,human,macaque,marmoset,orangutan,pig,rabbit, antisense antisense A549@0.031148,AG04450@0.003847,BJ@0,GM12878@0.054857,H1HESC@0.306887,HELAS3@0.197196,HEPG2@0.109531,HMEC@0,HSMM@0,HUVEC@0,K562@0.011684,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0.0993645, 0 0 0 0 ENSG00000235760.3 ENST00000439182.2 chr2:47754910-47762338 2 360 7066 intronic -1.28 0 0,1,0 0 0,0,0 0 34.1409566940277 0 0 25.7837531842627 0 0 26.3366827059157 0 0 0 chimp,elephant,horse,human,macaque,marmoset,orangutan, antisense antisense A549@0.031148,AG04450@0.003847,BJ@0,GM12878@0.054857,H1HESC@0.306887,HELAS3@0.197196,HEPG2@0.109531,HMEC@0,HSMM@0,HUVEC@0,K562@0.011684,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0.0993645, 0 0 0 0 ENSG00000225009.1 ENST00000454137.1 chr2:47922955-47984932 4 721 61250 intergenic 0.14 0 0,0,0 0 0,0,0 0 8.59559183673469 0 1.41470180305132 7.34140408163265 0 1.4368932038835 24.7558693877551 0 0 0 chimp,human,macaque,marmoset,orangutan, processed_transcript processed_transcript A549@0,AG04450@0,BJ@0,GM12878@0.01328,H1HESC@0.327033,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0.003135, 0 0 0 0 ENSG00000233230.1 ENST00000432064.1 chr2:48132817-48134774 2 438 1517 exonic 0 0 0,1,1 0 0,0,0 180.118721461187 465.564271588662 336.778 154.221461187215 381.720500988794 270.615 178.586757990868 339.089650626236 275.219 0 0 cat,chimp,cow,dog,horse,human,macaque,marmoset,orangutan,panda,pig,rabbit, antisense antisense A549@0.374093,AG04450@0.104389,BJ@0.078047,GM12878@0.476255,H1HESC@0.238721,HELAS3@0.394323,HEPG2@0.142196,HMEC@0.043693,HSMM@0.0503205,HUVEC@0.0490435,K562@0.232104,MCF7@0.189377,NHEK@0.115461,NHLF@0.0891885,SKNSHRA@0.288921, 0 0 0 0 ENSG00000233230.1 ENST00000439870.1 chr2:48133221-48134795 2 415 1157 intergenic 0 0 0,1,1 0 0,0,0 120.973493975904 407.554883318928 452.298 128.865060240964 363.262748487468 337.12 129.019277108434 336.687121866897 329.91 0 0 cat,chimp,cow,horse,human,macaque,marmoset,orangutan,panda,pig,rabbit, antisense antisense A549@0.374093,AG04450@0.104389,BJ@0.078047,GM12878@0.476255,H1HESC@0.238721,HELAS3@0.394323,HEPG2@0.142196,HMEC@0.043693,HSMM@0.0503205,HUVEC@0.0490435,K562@0.232104,MCF7@0.189377,NHEK@0.115461,NHLF@0.0891885,SKNSHRA@0.288921, 0 0 0 0 ENSG00000233230.1 ENST00000417692.1 chr2:48133969-48134949 2 654 324 intergenic -12.56 0 0,1,0 1 0,0,0 88.3501529051988 116.753086419753 590.819 180.441896024465 53.4475308641975 517.488 82.9587155963303 56.3518518518518 452.848 0 0 cat,chimp,cow,dog,elephant,guinea_pig,horse,human,macaque,marmoset,orangutan,panda,pig,rabbit, antisense antisense A549@0.374093,AG04450@0.104389,BJ@0.078047,GM12878@0.476255,H1HESC@0.238721,HELAS3@0.394323,HEPG2@0.142196,HMEC@0.043693,HSMM@0.0503205,HUVEC@0.0490435,K562@0.232104,MCF7@0.189377,NHEK@0.115461,NHLF@0.0891885,SKNSHRA@0.288921, 0 0 0 0 ENSG00000230773.1 ENST00000447571.1 chr2:48168835-48468122 9 1799 297472 intergenic 8.62 1 0,0,0 0 0,0,0 0 11.0164452452668 0 4.11839911061701 13.7875194976334 7.101 5.95330739299611 17.9844388715577 13.781 0 0 horse,human,macaque,marmoset,orangutan, lincRNA lincRNA A549@0.002728,AG04450@0.0024795,BJ@0,GM12878@0.0204625,H1HESC@0.021843,HELAS3@0.0046175,HEPG2@0.0094775,HMEC@0.004529,HSMM@0,HUVEC@0,K562@0.0040495,MCF7@0.002224,NHEK@0,NHLF@0,SKNSHRA@0.00251, 0 0 0 0 ENSG00000231918.1 ENST00000440698.1 chr2:51259739-52635055 11 3928 1371368 intergenic -1.61 0 0,0,0 0 0,0,0 11.3528513238289 6.04144985153511 389.215 13.5241853360489 7.74495613139581 404.057 14.1369653767821 9.3543374207361 427.431 0 0 chimp,human,macaque,marmoset,orangutan, processed_transcript processed_transcript A549@0,AG04450@0.000598,BJ@0.001643,GM12878@0.0040825,H1HESC@0.227335,HELAS3@0.0010595,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0.000522,NHEK@0,NHLF@0.0024635,SKNSHRA@0.000706, 0 0 0 0 ENSG00000237374.1 ENST00000416262.1 chr2:51429219-51448902 3 496 19183 intergenic -1.23 0 0,0,0 0 0,0,0 0 4.63530209039254 0 0 8.64807381535735 0 0 10.5688369910859 0 0 0 chimp,human,macaque,marmoset,orangutan, lincRNA lincRNA A549@0,AG04450@0.004846,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0.00397,SKNSHRA@0, 0 0 0 0 ENSG00000237374.1 ENST00000447773.1 chr2:51429219-51448902 3 483 19196 intergenic -1.23 0 0,0,0 0 0,0,0 0 4.63216295061471 0 0 8.64221712856845 0 0 10.561679516566 0 0 0 chimp,human,macaque,marmoset,orangutan, lincRNA lincRNA A549@0,AG04450@0.004846,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0.00397,SKNSHRA@0, 0 0 0 0 ENSG00000225444.1 ENST00000435357.1 chr2:52600256-52617150 2 602 16290 intergenic -1.65 0 0,1,0 0 0,0,0 0 1.62854511970534 0 0 3.3280540208717 0 4.29401993355482 3.782934315531 0 0 0 chimp,cow,elephant,human,macaque,marmoset,orangutan,panda,pig,rabbit, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0.0378725,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000236837.1 ENST00000443926.1 chr2:52721826-52727890 4 635 5423 intergenic 0 0 0,0,0 0 0,0,0 0 1.01419878296146 0 0 8.92107689470773 0 1.53070866141732 9.61976765627881 0 0 0 chimp,human,orangutan, lincRNA lincRNA A549@0,AG04450@0.0100925,BJ@0,GM12878@0,H1HESC@0.0184105,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000228033.1 ENST00000421575.1 chr2:52949815-53137158 5 484 186851 intergenic 0 1 0,0,1 0 0,0,0 0 6.69916136386747 0 6.23553719008264 11.1595816987867 0 11.5082644628099 11.8595190820493 0 0 0 chimp,cow,dog,elephant,horse,human,macaque,marmoset,orangutan,panda, lincRNA lincRNA A549@0.0060975,AG04450@0.025241,BJ@0,GM12878@0,H1HESC@0.009159,HELAS3@0.009976,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0.005525,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000228033.1 ENST00000443237.1 chr2:52949815-53137158 4 449 186888 intergenic 0 1 0,0,1 0 0,0,0 0 6.697835066992 0 6.72160356347439 11.1573723299516 0 12.4053452115813 11.8571711399341 0 0 0 chimp,cow,dog,elephant,horse,human,macaque,marmoset,orangutan,panda,pig,rabbit, lincRNA lincRNA A549@0.0060975,AG04450@0.025241,BJ@0,GM12878@0,H1HESC@0.009159,HELAS3@0.009976,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0.005525,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000232604.1 ENST00000418451.1 chr2:53091373-53093769 2 331 2063 intergenic -0.31 0 0,0,0 0 0,0,0 0 0 0 0 0 11.484 0 0 11.844 0 0 chimp,dog,elephant,guinea_pig,human,macaque,marmoset,orangutan,pig, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000239235.3 ENST00000458030.3 chr2:54197975-54307601 5 1325 108293 exonic 0.78 0 0,1,0 0 0,0,0 13.811320754717 5.64296861292974 104.271 94.9856603773585 9.3562649478729 124.89 237.344905660377 20.8784408964568 145.865 0 0 chimp,dog,guinea_pig,human,macaque,marmoset,mouse,orangutan,rat, processed_transcript processed_transcript A549@0.63077,AG04450@0.511135,BJ@0.457329,GM12878@0.236845,H1HESC@0.349782,HELAS3@0.423088,HEPG2@0.985826,HMEC@1.28535,HSMM@0.36724,HUVEC@0.062562,K562@0.308508,MCF7@0.0492135,NHEK@0.578594,NHLF@0.515277,SKNSHRA@0.762047, 0 0 0 0 ENSG00000239235.3 ENST00000422521.2 chr2:54198245-54293184 5 1110 93821 intergenic -2.68 0 1,1,1 1 0,0,0 8.28828828828829 5.24694897730785 122.871 53.7567567567568 8.55471589516206 244.084 67.118018018018 21.6785261295446 213.43 0 0 cat,chimp,human,macaque,marmoset,opossum,orangutan, processed_transcript processed_transcript A549@0.63077,AG04450@0.511135,BJ@0.457329,GM12878@0.236845,H1HESC@0.349782,HELAS3@0.423088,HEPG2@0.985826,HMEC@1.28535,HSMM@0.36724,HUVEC@0.062562,K562@0.308508,MCF7@0.0492135,NHEK@0.578594,NHLF@0.515277,SKNSHRA@0.762047, 0 0 0 0 ENSG00000228108.1 ENST00000433475.1 chr2:54743185-54767834 4 532 24111 intronic -4.61 0 0,0,1 0 0,0,0 0 5.3304300941479 33.206 0 15.9750736178508 44.873 0 26.1538302019825 53.335 0 0 chimp,cow,dog,horse,human,macaque,marmoset,orangutan,rabbit, antisense antisense A549@0.0103065,AG04450@0,BJ@0,GM12878@0.0237895,H1HESC@0.016289,HELAS3@0.008721,HEPG2@0.0081185,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0.007672,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000234943.2 ENST00000431130.2 chr2:54772505-54773814 2 375 932 intronic -12.84 0 0,0,0 0 0,0,0 0 66.5016077170418 8.151 0 61.1521972132905 19.527 3.89839572192513 56.1779206859593 18.876 0 0 chimp,cow,elephant,horse,human,macaque,marmoset,orangutan,panda, antisense antisense A549@0.0450105,AG04450@0,BJ@0,GM12878@0.103755,H1HESC@0.022329,HELAS3@0.104394,HEPG2@0.0402785,HMEC@0,HSMM@0,HUVEC@0,K562@0.0071015,MCF7@0,NHEK@0.0155027,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000238018.1 ENST00000456363.1 chr2:54888148-54889929 2 600 1179 exonic -11.08 0 0,0,0 0 0,0,0 154.423333333333 318.103477523325 388.74 136.585 349.680237489398 312.996 108.976666666667 340.19508057676 295.136 0 0 cat,chimp,cow,dog,elephant,guinea_pig,horse,human,macaque,marmoset,mouse,orangutan,panda,rabbit,rat, antisense antisense A549@0,AG04450@0,BJ@0.0059435,GM12878@0.004858,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000231334.1 ENST00000449838.1 chr2:54974240-54975541 2 395 904 intronic -10.09 1 0,0,0 0 0,0,0 0 13.0774336283186 0 0 32.6272123893805 3.224 0.615189873417721 33.5940265486726 7.741 0 0 cat,chimp,elephant,horse,human,macaque,marmoset,orangutan,panda,pig,rabbit, antisense antisense A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000203327.2 ENST00000366153.2 chr2:55441523-55443262 2 914 823 intronic -15.43 0 0,1,0 0 0,0,0 0 0 0 0 6.67922235722965 0 9.83698030634573 7.01458080194411 0 0 0 chimp,human,macaque,marmoset,orangutan,panda,pig,rabbit, antisense antisense A549@0.0981115,AG04450@0.109969,BJ@0.117732,GM12878@0.085477,H1HESC@0.0773925,HELAS3@0.27269,HEPG2@0.29971,HMEC@0.015807,HSMM@0.0383395,HUVEC@0.0680865,K562@0.219025,MCF7@0.056419,NHEK@0.166078,NHLF@0.0299625,SKNSHRA@0.19425, 0 0 0 0 ENSG00000162997.9 ENST00000295112.8 chr2:55509460-55511578 2 549 1567 intergenic -2.07 1 1,1,1 1 0,0,0 444.098360655738 4.70389278876835 0 491.475409836066 3.40778557753669 0 525.584699453552 3.59540523292916 0 0 0 cat,chimp,cow,dog,elephant,guinea_pig,horse,human,macaque,marmoset,mouse,opossum,orangutan,panda,pig,platypus,rabbit,rat, antisense antisense A549@0.990877,AG04450@0.116495,BJ@0.178024,GM12878@1.43933,H1HESC@0.77141,HELAS3@0.191203,HEPG2@1.26294,HMEC@0,HSMM@0.0534885,HUVEC@0.378853,K562@2.95073,MCF7@1.65181,NHEK@0.13928,NHLF@0.182843,SKNSHRA@0.145496, 0 0 0 0 ENSG00000240401.2 ENST00000366287.3 chr2:55535967-55541797 2 769 5059 exonic 2.67 0 0,0,0 0 0,0,0 98.0936280884265 40.609804309152 14.056 79.3966189856957 47.2097252421427 22.915 75.3433029908973 59.5429926863016 24.964 1 1 chimp,human,macaque,marmoset,orangutan, antisense antisense A549@0.038901,AG04450@0.036065,BJ@0.068331,GM12878@0.027263,H1HESC@0.131938,HELAS3@0.086622,HEPG2@0.0640855,HMEC@0,HSMM@0.0877075,HUVEC@0,K562@0.107068,MCF7@0.01849,NHEK@0.0212783,NHLF@0.0605125,SKNSHRA@0.0337945, 0 0 0 0 ENSG00000226702.1 ENST00000446139.1 chr2:56190326-56274461 3 897 83234 intergenic 2.22 0 0,0,1 0 0,0,0 125.952062430323 36.2866496864262 0 149.510590858417 36.7832496335632 11.34 139.895206243032 37.8603215032319 12.777 0 0 chimp,cow,dog,elephant,guinea_pig,horse,human,macaque,marmoset,mouse,opossum,orangutan,panda,pig,rabbit, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0.0159335,HEPG2@0,HMEC@0,HSMM@0.011924,HUVEC@2.26661,K562@0,MCF7@0.0022845,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000229805.1 ENST00000451034.1 chr2:56304552-56317517 2 710 12253 intergenic -1.46 0 0,0,0 0 0,0,0 0 3.96515139149596 0 0 3.16191952991104 2.295 0 5.45278707255366 2.385 0 0 chimp,dog,elephant,guinea_pig,horse,human,macaque,marmoset,orangutan,panda, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000233251.2 ENST00000432793.1 chr2:56401875-56412905 3 1654 9372 intronic 3.95 0 0,1,0 0 0,0,0 0 13.3747332479727 45.75 5.02720677146312 30.1704011950491 60.431 5.13240628778718 24.7164959453692 59.166 0 0 chimp,human,macaque,orangutan, lincRNA processed_transcript A549@0.040096,AG04450@0.001824,BJ@0.563959,GM12878@0.029669,H1HESC@0.011327,HELAS3@0.011086,HEPG2@0,HMEC@0.007534,HSMM@0.56309,HUVEC@4.46584,K562@0,MCF7@2.06605,NHEK@0.00754233,NHLF@0.011883,SKNSHRA@1.53967, 0 0 0 0 ENSG00000233251.2 ENST00000447423.2 chr2:56402686-56412048 4 1619 7737 exonic 27.36 0 0,1,0 1 0,0,0 11.9073502161828 13.6698978932403 45.75 94.4626312538604 16.2404032570764 56.009 95.8190240889438 9.91443712033088 50.799 0 0 cat,chimp,horse,human,macaque,marmoset,orangutan,pig, lincRNA processed_transcript A549@0.040096,AG04450@0.001824,BJ@0.563959,GM12878@0.029669,H1HESC@0.011327,HELAS3@0.011086,HEPG2@0,HMEC@0.007534,HSMM@0.56309,HUVEC@4.46584,K562@0,MCF7@2.06605,NHEK@0.00754233,NHLF@0.011883,SKNSHRA@1.53967, 0 0 0 0 ENSG00000255922.1 ENST00000445599.2 chr2:57419954-57425788 3 569 5261 intergenic 3.66 0 0,0,0 0 0,0,0 0 0 0 0 0 0 0 0 0 0 0 NA lincRNA lincRNA A549@0,AG04450@0,BJ@0.0084615,GM12878@0,H1HESC@0.0036265,HELAS3@0,HEPG2@0.0074495,HMEC@0.028634,HSMM@0.0430615,HUVEC@0,K562@0.08929,MCF7@0,NHEK@0.008927,NHLF@0,SKNSHRA@0.0332035, 143 2 0 0 ENSG00000225226.1 ENST00000454367.1 chr2:58503012-58523683 3 810 19857 intergenic 1.57 0 0,0,0 0 0,0,0 26.5 59.1761091806416 0 39.2296296296296 86.1060079568918 0 38.7407407407407 88.7794732336204 2.43 0 0 chimp,human,orangutan, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0.0060875,HELAS3@0,HEPG2@0.0328725,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000233723.2 ENST00000422723.1 chr2:58654934-59152836 6 669 497223 intergenic 19.52 0 0,0,1 0 0,0,0 147.046337817638 101.399613453119 17.99 83.6113602391629 98.9456903642833 1.24 92.5381165919283 98.8581602218721 6.816 0 0 chimp,cow,horse,human,macaque,opossum,orangutan,pig,rabbit, lincRNA lincRNA A549@0.0278175,AG04450@0.0171955,BJ@0.0032185,GM12878@0.018767,H1HESC@1.35594,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0.0346635,K562@0.010145,MCF7@0.034145,NHEK@0.00706067,NHLF@0.012668,SKNSHRA@0.095525, 0 0 0 0 ENSG00000233723.2 ENST00000455219.2 chr2:58655168-58923190 4 647 267369 intergenic -5.82 0 0,0,0 0 0,0,0 77.3333333333333 86.6009208282217 0 27.0586419753086 87.4588021004757 4.75 33.9706790123457 89.4353512761437 10.416 0 0 cat,chimp,dog,horse,human,macaque,marmoset,orangutan,panda, lincRNA lincRNA A549@0.0278175,AG04450@0.0171955,BJ@0.0032185,GM12878@0.018767,H1HESC@1.35594,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0.0346635,K562@0.010145,MCF7@0.034145,NHEK@0.00706067,NHLF@0.012668,SKNSHRA@0.095525, 0 0 0 0 ENSG00000233723.2 ENST00000429095.1 chr2:58655473-59152836 5 540 496815 intergenic 7.03 0 0,1,1 1 0,0,0 280.262962962963 101.14461922446 114.144 189.707407407407 98.8391091251271 47.576 225.738888888889 98.7047009450199 62.8 0 0 cat,chimp,cow,dog,guinea_pig,horse,human,macaque,marmoset,opossum,orangutan,pig,rabbit,rat, lincRNA lincRNA A549@0.0278175,AG04450@0.0171955,BJ@0.0032185,GM12878@0.018767,H1HESC@1.35594,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0.0346635,K562@0.010145,MCF7@0.034145,NHEK@0.00706067,NHLF@0.012668,SKNSHRA@0.095525, 0 0 0 0 ENSG00000233723.2 ENST00000429664.1 chr2:58655473-59152836 5 534 496821 intergenic 7.34 0 0,1,1 1 0,0,0 224.191011235955 101.208950507326 114.144 143.340823970037 98.8910070226499 47.576 156.074906367041 98.7823199904995 62.8 0 0 cat,chimp,cow,dog,elephant,guinea_pig,horse,human,macaque,marmoset,opossum,orangutan,pig,rabbit, lincRNA lincRNA A549@0.0278175,AG04450@0.0171955,BJ@0.0032185,GM12878@0.018767,H1HESC@1.35594,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0.0346635,K562@0.010145,MCF7@0.034145,NHEK@0.00706067,NHLF@0.012668,SKNSHRA@0.095525, 0 0 0 0 ENSG00000233723.2 ENST00000452840.1 chr2:58655473-59290901 12 4065 631341 intergenic 7.03 1 0,1,0 1 0,0,0 128.467158671587 101.083165832727 114.144 104.855842558426 97.8403366801776 47.576 106.80467404674 98.1356937059371 62.8 0 0 chimp,human,macaque,marmoset,mouse,orangutan, lincRNA lincRNA A549@0.0278175,AG04450@0.0171955,BJ@0.0032185,GM12878@0.018767,H1HESC@1.35594,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0.0346635,K562@0.010145,MCF7@0.034145,NHEK@0.00706067,NHLF@0.012668,SKNSHRA@0.095525, 0 0 0 0 ENSG00000233723.2 ENST00000449448.2 chr2:58655520-59231127 5 677 574922 intergenic 7.03 0 0,0,0 1 0,0,0 351.625368731563 102.469530596378 135.952 227.3598820059 100.282167463008 68.632 219.272861356932 100.300884817218 84.216 0 0 cat,chimp,cow,dog,elephant,horse,human,macaque,marmoset,mouse,opossum,orangutan,panda,pig,rabbit,rat, lincRNA lincRNA A549@0.0278175,AG04450@0.0171955,BJ@0.0032185,GM12878@0.018767,H1HESC@1.35594,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0.0346635,K562@0.010145,MCF7@0.034145,NHEK@0.00706067,NHLF@0.012668,SKNSHRA@0.095525, 0 0 0 0 ENSG00000233723.2 ENST00000427421.1 chr2:58747888-59288788 14 2169 538705 intergenic 7.03 0 0,0,0 0 0,0,0 136.020746887967 106.714216500682 282.981 97.2434301521438 103.014547850865 249.119 98.8750576302444 102.41554654217 244.578 0 0 chimp,horse,human,macaque,marmoset,orangutan,panda, lincRNA lincRNA A549@0.0278175,AG04450@0.0171955,BJ@0.0032185,GM12878@0.018767,H1HESC@1.35594,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0.0346635,K562@0.010145,MCF7@0.034145,NHEK@0.00706067,NHLF@0.012668,SKNSHRA@0.095525, 0 0 0 0 ENSG00000233723.2 ENST00000422793.1 chr2:59151737-59158211 3 762 5708 intergenic 3.48 0 0,0,1 0 0,0,0 209.005249343832 107.579712683952 33.04 115.589238845144 113.814821303434 2.367 114.074803149606 106.965662228451 10.959 0 0 cat,chimp,cow,dog,elephant,guinea_pig,horse,human,macaque,marmoset,orangutan,panda,pig,rabbit, lincRNA lincRNA A549@0.0278175,AG04450@0.0171955,BJ@0.0032185,GM12878@0.018767,H1HESC@1.35594,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0.0346635,K562@0.010145,MCF7@0.034145,NHEK@0.00706067,NHLF@0.012668,SKNSHRA@0.095525, 0 0 0 0 ENSG00000222030.1 ENST00000409590.1 chr2:59444843-59506535 3 2033 59655 intergenic 2.62 0 0,0,0 0 0,1,0 103.644367929169 71.8331405582097 310.139 144.855386128874 248.671226217417 292.806 138.121003443187 62.2960355376749 271.866 0 0 cat,chimp,cow,dog,elephant,guinea_pig,horse,human,macaque,marmoset,mouse,opossum,orangutan,panda,pig,rabbit,rat, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0.246083,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0.0022285, 0 0 0 0 ENSG00000233891.3 ENST00000451416.1 chr2:59465851-59476646 3 389 10402 intergenic -0.03 1 0,0,0 0 0,0,0 358.110539845758 133.597000576812 477.559 287.54498714653 115.992020765237 529.63 279.47557840617 112.444337627379 504.002 0 0 cat,chimp,cow,dog,elephant,guinea_pig,horse,human,macaque,marmoset,mouse,opossum,orangutan,panda,pig,platypus,rabbit, processed_transcript processed_transcript A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000233891.3 ENST00000440521.1 chr2:59465851-59476702 3 373 10474 intergenic -1.01 1 0,0,0 0 0,0,0 426.769436997319 132.678632805041 482.718 338.742627345844 115.242027878556 541.282 317.600536193029 111.71930494558 520.447 0 0 cat,chimp,cow,dog,guinea_pig,horse,human,macaque,marmoset,mouse,opossum,orangutan,panda,pig,rabbit,rat, processed_transcript processed_transcript A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000233891.3 ENST00000443306.1 chr2:59465851-59476807 3 419 10533 intergenic 2.24 1 0,0,0 0 0,0,0 571.286396181384 129.1729801576 460.173 497.276849642005 113.351656697997 492.582 433.355608591885 109.931643406437 485.617 0 0 cat,chimp,cow,dog,elephant,guinea_pig,horse,human,macaque,marmoset,mouse,opossum,orangutan,panda,pig,platypus,rabbit,rat, processed_transcript processed_transcript A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000233891.3 ENST00000444001.2 chr2:59465857-59615500 4 761 148876 intergenic -0.14 1 0,0,0 0 0,0,0 263.313648293963 57.4203056255248 192.857 234.108923884514 55.7394592779177 166.172 214.98031496063 55.0038891687657 188.454 0 0 cat,chimp,cow,dog,elephant,guinea_pig,horse,human,macaque,marmoset,mouse,opossum,orangutan,panda,pig,platypus,rabbit,rat, processed_transcript processed_transcript A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000233891.3 ENST00000412409.3 chr2:59468077-59960531 5 702 491744 intergenic 6.94 0 0,0,1 0 0,0,0 0 52.5099564000781 178.59 2.47293447293447 55.5315611375025 163.517 2.502849002849 55.8961227793324 144.256 0 0 cat,chimp,cow,dog,horse,human,macaque,marmoset,orangutan,rabbit, processed_transcript processed_transcript A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000233891.3 ENST00000434611.1 chr2:59522515-59615294 4 463 92310 intergenic -0.12 0 0,0,0 0 0,0,0 340.643628509719 42.5176037265735 203.978 264.570194384449 41.2425522695266 168.404 226.699784017279 41.4256960242661 190.839 0 0 chimp,cow,elephant,horse,human,macaque,marmoset,orangutan,pig,rat, processed_transcript processed_transcript A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000231815.1 ENST00000415159.1 chr2:59662348-59669396 3 435 6609 intergenic -2.73 0 0,0,0 0 0,0,0 319.158620689655 89.188984717809 410.71 244.763218390805 97.4289605083976 510.03 235.480459770115 89.7044938719928 487.035 0 0 chimp,cow,dog,elephant,guinea_pig,horse,human,macaque,marmoset,mouse,orangutan,rabbit, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000233891.3 ENST00000435557.1 chr2:59896351-59960466 3 553 63558 intergenic -0.02 0 0,0,0 0 0,0,0 278.51356238698 54.7178639982379 148.17 336.965641952984 61.6089241322886 125.167 314.929475587703 64.3664054879008 105.906 0 0 chimp,cow,elephant,horse,human,macaque,marmoset,opossum,orangutan,panda,platypus,rabbit,rat, processed_transcript processed_transcript A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000228590.1 ENST00000457668.1 chr2:60577730-60580151 2 2003 416 intergenic 2.74 0 1,1,1 0 0,0,0 20.4238642036945 0 126.162 28.717923115327 0 60.379 26.719420868697 0 107.707 0 0 chimp,human,macaque,marmoset,orangutan, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000223929.1 ENST00000453476.1 chr2:60586351-60618510 2 701 31456 intergenic 0.39 0 0,1,1 0 0,0,0 230.547788873039 46.5923194303154 0 155.186875891583 49.6477937436419 0 148.574893009986 51.4412830620549 1.944 0 0 chimp,cow,dog,elephant,guinea_pig,horse,human,macaque,marmoset,mouse,orangutan,panda,pig,rabbit,rat, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000223929.1 ENST00000441598.1 chr2:60586855-60610171 4 466 22844 intergenic 0.77 0 0,0,0 0 0,0,0 6.91201716738197 47.1908159691823 209.891 15.5042918454936 49.7461915601471 241.141 20.0643776824034 52.1786026965505 236.793 0 0 cat,chimp,dog,elephant,horse,human,macaque,marmoset,mouse,orangutan,panda,pig,rabbit, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000233953.1 ENST00000444873.1 chr2:60722821-60727099 3 429 3845 intronic 0 0 0,0,1 0 0,0,0 14.7272727272727 11.7815344603381 0 17.3962703962704 21.4101430429129 13.615 17.2237762237762 19.414044213264 14.438 0 0 cat,chimp,elephant,horse,human,macaque,marmoset,orangutan,pig, antisense antisense A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000228414.2 ENST00000439412.1 chr2:61052267-61108449 4 550 55626 intergenic 2.15 0 0,0,0 0 0,0,0 22.9072727272727 7.3159673533959 0 20.3727272727273 11.1773091719699 84.283 19.9690909090909 17.4394527738827 80.477 0 0 cat,chimp,cow,human,marmoset,orangutan,pig, lincRNA processed_transcript A549@0,AG04450@0,BJ@0,GM12878@0.0011825,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0.00135233,NHLF@0,SKNSHRA@0.0195545, 0 0 0 0 ENSG00000228414.2 ENST00000452343.1 chr2:61074895-61108449 3 1702 31848 intergenic 3.79 0 0,0,0 0 0,0,0 7.40246768507638 5.73643556895252 0 20.3954171562867 8.13376036171816 84.283 24.7784958871915 18.2959683496609 80.477 0 0 human,macaque,orangutan, lincRNA processed_transcript A549@0,AG04450@0,BJ@0,GM12878@0.0011825,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0.00135233,NHLF@0,SKNSHRA@0.0195545, 0 0 0 0 ENSG00000212978.4 ENST00000542553.1 chr2:61368732-61369778 1 1046 0 intergenic -3.42 0 0,0,1 0 0,0,0 33.2026768642447 0 0 0 0 0 0 0 0 0 1 chimp,human,macaque,orangutan, lincRNA processed_transcript A549@13.7291,AG04450@5.34543,BJ@5.4724,GM12878@3.86252,H1HESC@1.34501,HELAS3@8.85699,HEPG2@5.08983,HMEC@6.98909,HSMM@5.10859,HUVEC@3.86428,K562@0.0019795,MCF7@3.73007,NHEK@4.82236,NHLF@6.30136,SKNSHRA@6.4191, 0 0 0 0 ENSG00000212978.4 ENST00000420918.1 chr2:61368913-61372085 2 2344 826 intergenic 3.21 0 1,1,1 1 0,0,0 3.63054607508532 0 0 0 0 0 0 0 0 0 0 chimp,human,macaque, lincRNA processed_transcript A549@13.7291,AG04450@5.34543,BJ@5.4724,GM12878@3.86252,H1HESC@1.34501,HELAS3@8.85699,HEPG2@5.08983,HMEC@6.98909,HSMM@5.10859,HUVEC@3.86428,K562@0.0019795,MCF7@3.73007,NHEK@4.82236,NHLF@6.30136,SKNSHRA@6.4191, 0 0 0 0 ENSG00000212978.4 ENST00000417691.1 chr2:61370690-61372087 2 890 505 intergenic -3.31 0 1,1,1 1 0,0,0 0 0 0 0 0 0 0 0 0 0 1 chimp,human,marmoset,orangutan, lincRNA retained_intron A549@13.7291,AG04450@5.34543,BJ@5.4724,GM12878@3.86252,H1HESC@1.34501,HELAS3@8.85699,HEPG2@5.08983,HMEC@6.98909,HSMM@5.10859,HUVEC@3.86428,K562@0.0019795,MCF7@3.73007,NHEK@4.82236,NHLF@6.30136,SKNSHRA@6.4191, 0 0 0 0 ENSG00000212978.4 ENST00000422740.1 chr2:61370703-61372026 3 592 727 intergenic -3.31 0 1,1,1 1 0,0,0 0 0 0 0 0 0 0 0 0 0 0 human,macaque,marmoset,orangutan, lincRNA processed_transcript A549@13.7291,AG04450@5.34543,BJ@5.4724,GM12878@3.86252,H1HESC@1.34501,HELAS3@8.85699,HEPG2@5.08983,HMEC@6.98909,HSMM@5.10859,HUVEC@3.86428,K562@0.0019795,MCF7@3.73007,NHEK@4.82236,NHLF@6.30136,SKNSHRA@6.4191, 0 0 0 0 ENSG00000212978.4 ENST00000443946.1 chr2:61371541-61372104 2 432 129 intergenic -3.17 0 0,1,0 1 0,0,0 0 0 0 0 0 0 0 0 0 0 0 chimp,human,orangutan, lincRNA processed_transcript A549@13.7291,AG04450@5.34543,BJ@5.4724,GM12878@3.86252,H1HESC@1.34501,HELAS3@8.85699,HEPG2@5.08983,HMEC@6.98909,HSMM@5.10859,HUVEC@3.86428,K562@0.0019795,MCF7@3.73007,NHEK@4.82236,NHLF@6.30136,SKNSHRA@6.4191, 1 96 0 0 ENSG00000236498.1 ENST00000425779.1 chr2:62095567-62113217 2 800 16848 exonic -2.21 0 0,1,0 0 0,0,0 8.365 41.7970679012346 0 32.205 56.6723646723647 0 38.125 63.1668447293447 0 0 0 chimp,cow,dog,elephant,guinea_pig,horse,human,macaque,marmoset,mouse,orangutan,panda,pig,rabbit,rat, antisense antisense A549@0.101116,AG04450@0.0199885,BJ@0.0291145,GM12878@0.0464125,H1HESC@0,HELAS3@0.026131,HEPG2@0.019705,HMEC@0,HSMM@0,HUVEC@0,K562@0.0339655,MCF7@0.007577,NHEK@0.0161893,NHLF@0.002433,SKNSHRA@0.0233, 0 0 0 0 ENSG00000229839.2 ENST00000425966.2 chr2:62296582-62374016 8 1676 75744 exonic 5.89 0 1,1,1 0 0,0,0 53.6217183770883 7.80563476975074 155.23 96.1121718377088 8.92231727925644 184.97 145.880071599045 14.0528622729193 372.354 0 0 chimp,human,macaque,marmoset,orangutan, antisense antisense A549@0,AG04450@0,BJ@0,GM12878@1.66258,H1HESC@0.001232,HELAS3@0.0070865,HEPG2@0.003694,HMEC@0.002431,HSMM@0,HUVEC@0.0015855,K562@0.001379,MCF7@0,NHEK@0,NHLF@0.001146,SKNSHRA@0, 0 0 0 0 ENSG00000229839.2 ENST00000421323.1 chr2:62306850-62374016 6 583 66573 exonic -4.02 0 0,1,0 0 0,0,0 154.150943396226 8.88092770342331 155.23 228.927958833619 10.0253856668619 184.97 326.259005145798 16.0100941823262 372.354 0 0 cat,chimp,cow,dog,elephant,guinea_pig,horse,human,macaque,marmoset,mouse,opossum,orangutan,panda,pig,rabbit,rat, antisense antisense A549@0,AG04450@0,BJ@0,GM12878@1.66258,H1HESC@0.001232,HELAS3@0.0070865,HEPG2@0.003694,HMEC@0.002431,HSMM@0,HUVEC@0.0015855,K562@0.001379,MCF7@0,NHEK@0,NHLF@0.001146,SKNSHRA@0, 0 0 0 0 ENSG00000228541.1 ENST00000416845.1 chr2:62690262-62691205 2 422 519 intergenic -4.33 0 0,0,1 0 0,0,0 0 0 0 0 0 3.224 0 0 3.263 0 0 NA lincRNA lincRNA A549@0,AG04450@0.027236,BJ@0.0058065,GM12878@0.120107,H1HESC@0.011672,HELAS3@0.0110245,HEPG2@0.111401,HMEC@0,HSMM@0.004853,HUVEC@0,K562@0.463778,MCF7@0.004849,NHEK@0.0399633,NHLF@0.018203,SKNSHRA@0.0458045, 173 2 0 0 ENSG00000226622.1 ENST00000444672.1 chr2:62817390-62889789 4 569 71824 intergenic -4.72 0 0,0,1 0 0,0,0 0 21.3210904433059 154.404 4.57117750439367 26.2395438850524 180.444 4.88752196836555 27.7737246602807 182.819 0 0 chimp,horse,human,marmoset,orangutan, antisense antisense A549@0,AG04450@0.0141125,BJ@0.0096575,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0.008831,HUVEC@0,K562@0,MCF7@0,NHEK@0.00141333,NHLF@0.025146,SKNSHRA@0, 0 0 0 0 ENSG00000226622.1 ENST00000416111.1 chr2:62839007-62889763 8 924 49818 intergenic 3.68 1 0,0,0 0 0,0,0 0 26.6799951824642 140.156 0 30.6030149745072 167.396 0 33.080452848368 170.075 0 0 chimp,human,macaque,marmoset,orangutan,rabbit, antisense antisense A549@0,AG04450@0.0141125,BJ@0.0096575,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0.008831,HUVEC@0,K562@0,MCF7@0,NHEK@0.00141333,NHLF@0.025146,SKNSHRA@0, 0 0 0 0 ENSG00000226605.1 ENST00000452397.1 chr2:63053199-63085573 2 249 32123 exonic 0 0 0,0,0 0 0,0,0 446.835341365462 9.80073467608878 259.722 629.064257028112 14.0230675839741 272.669 689.618473895582 15.3293590262429 277.426 0 0 cat,chimp,cow,dog,elephant,guinea_pig,horse,human,macaque,marmoset,mouse,opossum,orangutan,panda,pig,platypus,rabbit,rat, antisense antisense A549@0.0110045,AG04450@0.009383,BJ@0.009641,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0.042556,K562@0.009785,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000231609.1 ENST00000429952.1 chr2:63271057-63274846 4 2065 1718 exonic -1.13 0 0,1,0 0 0,0,0 399.389346246973 285.059371362049 182.52 388.907021791767 287.221187427241 94.637 336.131719128329 263.687427240978 119.201 0 0 chimp,elephant,guinea_pig,horse,human,macaque,marmoset,mouse,orangutan,panda,pig,rabbit,rat, antisense antisense A549@0.032786,AG04450@0,BJ@0.00119,GM12878@0.0067795,H1HESC@0.062768,HELAS3@0.023954,HEPG2@0.0087575,HMEC@0.005157,HSMM@0,HUVEC@0,K562@0.0180155,MCF7@0.0390295,NHEK@0.0710233,NHLF@0,SKNSHRA@0.0013, 0 0 0 0 ENSG00000231609.1 ENST00000437346.1 chr2:63272196-63275775 4 790 2783 exonic -1.13 0 0,1,1 0 0,0,0 332.889873417722 244.701042040963 310.554 319.96329113924 217.143011139059 392.225 256.794936708861 210.98526769673 337.093 0 0 chimp,cow,elephant,horse,human,macaque,marmoset,mouse,orangutan,panda,pig,rabbit,rat, antisense antisense A549@0.032786,AG04450@0,BJ@0.00119,GM12878@0.0067795,H1HESC@0.062768,HELAS3@0.023954,HEPG2@0.0087575,HMEC@0.005157,HSMM@0,HUVEC@0,K562@0.0180155,MCF7@0.0390295,NHEK@0.0710233,NHLF@0,SKNSHRA@0.0013, 0 0 0 0 ENSG00000231609.1 ENST00000412297.1 chr2:63272311-63273744 2 394 1037 exonic -1.13 0 0,0,0 0 0,0,0 371.02538071066 496.750241080039 37.899 284.94923857868 491.259402121504 60.017 233.393401015228 427.194792671167 55.506 0 0 chimp,cow,elephant,guinea_pig,horse,human,macaque,marmoset,mouse,orangutan,panda,pig,rabbit,rat, antisense antisense A549@0.032786,AG04450@0,BJ@0.00119,GM12878@0.0067795,H1HESC@0.062768,HELAS3@0.023954,HEPG2@0.0087575,HMEC@0.005157,HSMM@0,HUVEC@0,K562@0.0180155,MCF7@0.0390295,NHEK@0.0710233,NHLF@0,SKNSHRA@0.0013, 0 0 0 0 ENSG00000231609.1 ENST00000413549.1 chr2:63272446-63275656 4 536 2668 exonic 0.21 0 0,1,0 0 0,0,0 416.30223880597 233.590704647676 310.554 374.92723880597 217.816341829085 382.493 283.050373134328 211.263493253373 333.603 0 0 chimp,cow,dog,elephant,horse,human,macaque,marmoset,mouse,orangutan,panda,pig,rabbit, antisense antisense A549@0.032786,AG04450@0,BJ@0.00119,GM12878@0.0067795,H1HESC@0.062768,HELAS3@0.023954,HEPG2@0.0087575,HMEC@0.005157,HSMM@0,HUVEC@0,K562@0.0180155,MCF7@0.0390295,NHEK@0.0710233,NHLF@0,SKNSHRA@0.0013, 0 0 0 0 ENSG00000228079.1 ENST00000423539.1 chr2:64313484-64315380 2 561 1333 intergenic -0.07 0 0,1,0 0 0,0,0 3.99286987522282 8.61215303825957 0 6.81639928698752 4.55438859714929 0 10.3957219251337 5.07726931732933 2.673 0 0 chimp,cow,dog,elephant,guinea_pig,horse,human,macaque,marmoset,orangutan,panda,pig,rabbit, lincRNA lincRNA A549@0.0055135,AG04450@0,BJ@0.034166,GM12878@0.104584,H1HESC@0.0263925,HELAS3@0.020619,HEPG2@0.0152975,HMEC@0,HSMM@0,HUVEC@0.0186665,K562@0.014045,MCF7@0.003571,NHEK@0.0348317,NHLF@0.003427,SKNSHRA@0.0623125, 0 0 0 0 ENSG00000225889.2 ENST00000438115.1 chr2:64370373-64456739 5 501 85857 intronic 1.09 0 0,1,1 0 0,0,0 19.1556886227545 22.1683496977532 23.956 44.1676646706587 29.4972104778877 13.215 44.6546906187625 30.7766169328069 18.626 0 0 chimp,cow,dog,elephant,guinea_pig,horse,human,macaque,marmoset,mouse,orangutan,panda,pig,rabbit,rat, lincRNA processed_transcript A549@0.008396,AG04450@0.017552,BJ@0,GM12878@3.71554,H1HESC@1.7079,HELAS3@0,HEPG2@0,HMEC@0.071161,HSMM@0.020334,HUVEC@0.199802,K562@0.630246,MCF7@0.010451,NHEK@0.121676,NHLF@0.002566,SKNSHRA@0.101097, 0 0 0 0 ENSG00000230923.1 ENST00000431020.1 chr2:64412212-64432619 6 3301 17096 intergenic 3.57 1 0,0,0 0 0,0,0 16.59739472887 34.1250584932148 0 41.0327173583763 38.0639330837623 1.38 36.3641320811875 38.2659686476369 5.346 0 0 chimp,elephant,horse,human,macaque,marmoset,orangutan,pig, lincRNA lincRNA A549@0,AG04450@0,BJ@0.001489,GM12878@0.044337,H1HESC@0.087755,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0.00312833,NHLF@0.00118,SKNSHRA@0, 0 0 0 0 ENSG00000225889.2 ENST00000413030.2 chr2:64434109-64478489 4 494 43880 intergenic 4.44 0 0,0,1 0 0,0,0 217.91935483871 20.9575185742285 0 194.747983870968 22.5130133552122 1.38 193.546370967742 24.3197274260449 1.458 0 0 cat,chimp,horse,human,macaque,marmoset,mouse,orangutan,rabbit, lincRNA processed_transcript A549@0.008396,AG04450@0.017552,BJ@0,GM12878@3.71554,H1HESC@1.7079,HELAS3@0,HEPG2@0,HMEC@0.071161,HSMM@0.020334,HUVEC@0.199802,K562@0.630246,MCF7@0.010451,NHEK@0.121676,NHLF@0.002566,SKNSHRA@0.101097, 0 0 0 0 ENSG00000225889.2 ENST00000426365.1 chr2:64454995-64478478 3 495 22984 intergenic 5.40 0 0,0,1 0 0,0,0 208.181818181818 11.6610250609119 21.824 183.868686868687 14.4446136442743 27.5 182.543434343434 17.5071789070658 28.782 0 0 human,macaque,marmoset,mouse,orangutan,pig, lincRNA processed_transcript A549@0.008396,AG04450@0.017552,BJ@0,GM12878@3.71554,H1HESC@1.7079,HELAS3@0,HEPG2@0,HMEC@0.071161,HSMM@0.020334,HUVEC@0.199802,K562@0.630246,MCF7@0.010451,NHEK@0.121676,NHLF@0.002566,SKNSHRA@0.101097, 0 0 0 0 ENSG00000225889.2 ENST00000449678.1 chr2:64455557-64479072 4 597 22912 intergenic 4.44 0 0,1,0 1 0,0,0 172.790619765494 11.9168557960894 21.824 157.350083752094 14.3372468575419 40.643 160.976549413735 17.0759427374302 47.529 0 0 cat,chimp,elephant,horse,human,macaque,marmoset,pig, lincRNA processed_transcript A549@0.008396,AG04450@0.017552,BJ@0,GM12878@3.71554,H1HESC@1.7079,HELAS3@0,HEPG2@0,HMEC@0.071161,HSMM@0.020334,HUVEC@0.199802,K562@0.630246,MCF7@0.010451,NHEK@0.121676,NHLF@0.002566,SKNSHRA@0.101097, 0 0 0 0 ENSG00000225889.2 ENST00000436950.1 chr2:64455587-64475672 4 543 19536 intergenic 4.44 0 0,1,0 1 0,0,0 6.09944751381216 10.8581592956593 21.824 7.81767955801105 11.859183046683 43.227 12.8397790055249 15.2791769041769 50.249 0 0 cat,chimp,horse,human,macaque,orangutan,pig, lincRNA processed_transcript A549@0.008396,AG04450@0.017552,BJ@0,GM12878@3.71554,H1HESC@1.7079,HELAS3@0,HEPG2@0,HMEC@0.071161,HSMM@0.020334,HUVEC@0.199802,K562@0.630246,MCF7@0.010451,NHEK@0.121676,NHLF@0.002566,SKNSHRA@0.101097, 0 0 0 0 ENSG00000225889.2 ENST00000451350.1 chr2:64455602-64479993 4 1500 22885 intergenic 4.44 1 0,1,0 1 0,0,0 74.8773333333333 11.550666375355 21.824 71.56 13.7126939043041 44.196 72.6606666666667 16.4212803146166 52.432 0 0 chimp,human,macaque, lincRNA processed_transcript A549@0.008396,AG04450@0.017552,BJ@0,GM12878@3.71554,H1HESC@1.7079,HELAS3@0,HEPG2@0,HMEC@0.071161,HSMM@0.020334,HUVEC@0.199802,K562@0.630246,MCF7@0.010451,NHEK@0.121676,NHLF@0.002566,SKNSHRA@0.101097, 0 0 0 0 ENSG00000238012.1 ENST00000448204.1 chr2:64557620-64559265 2 287 1356 intergenic -3.62 0 0,0,1 0 0,0,0 55.8536585365854 159.591445427729 0 0 32.7300884955752 0 0 31.8075221238938 0 0 0 chimp,cow,human,macaque,orangutan, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000238201.1 ENST00000424119.1 chr2:64565201-64568781 2 402 3176 intergenic 6.19 1 0,0,0 0 0,0,0 0 0 0 0 0 0 0 0 0 0 0 chimp,elephant,human,macaque,marmoset,orangutan,panda, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000223935.1 ENST00000441630.1 chr2:64622354-64680932 4 719 57853 intergenic 1.50 0 0,1,0 0 0,0,0 0 6.81580903323942 10.78 2.56050069541029 9.77230221423263 115.463 2.6481223922114 11.977840388571 94.407 0 0 cat,chimp,guinea_pig,human,macaque,marmoset,orangutan, antisense antisense A549@0.115727,AG04450@0,BJ@0.026951,GM12878@0.397547,H1HESC@0.412399,HELAS3@0.14875,HEPG2@0.260097,HMEC@0.067961,HSMM@0.021149,HUVEC@0.173047,K562@0,MCF7@0.189348,NHEK@0.143099,NHLF@0.013344,SKNSHRA@0.0246835, 0 0 0 0 ENSG00000223863.1 ENST00000436433.1 chr2:64713487-64728038 3 569 13978 intergenic 3.30 0 0,1,1 0 0,0,0 0 6.19115753326656 37.149 11.5887521968366 8.59858348833882 66.406 10.3690685413005 12.1516669051366 69.688 0 0 chimp,cow,dog,human,macaque,marmoset,mouse,orangutan,rabbit, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0.014317,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0.059514,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000233694.1 ENST00000445738.1 chr2:64834109-64843133 4 1382 7636 intergenic 3.64 0 0,0,0 0 0,0,0 0 9.07752750130959 0 6.39218523878437 10.4508905185961 0 6.45441389290883 10.5856469355684 0 0 0 chimp,horse,human,macaque,marmoset,orangutan, lincRNA processed_transcript A549@0.0024335,AG04450@0.006408,BJ@0,GM12878@0.0129175,H1HESC@0.0017855,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0.00328,MCF7@0.0071375,NHEK@0.0329303,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000233694.1 ENST00000417695.1 chr2:64834495-64843616 4 1718 7397 intergenic -2.65 1 1,1,1 0 0,0,0 0 9.37082601054481 0 5.14202561117579 10.7885629309179 0 5.19208381839348 10.9276733811004 0 0 0 chimp,dog,horse,human,macaque,marmoset,orangutan, lincRNA processed_transcript A549@0.0024335,AG04450@0.006408,BJ@0,GM12878@0.0129175,H1HESC@0.0017855,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0.00328,MCF7@0.0071375,NHEK@0.0329303,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000226756.1 ENST00000439964.1 chr2:64871746-64873832 2 625 1459 intronic -0.46 0 0,1,1 0 0,0,0 0 71.564084989719 0 15.008 57.6490747087046 0 16.5328 95.9294037011652 4.661 0 0 cat,chimp,guinea_pig,horse,human,macaque,marmoset,orangutan,panda,pig, lincRNA lincRNA A549@0.167179,AG04450@0.104494,BJ@0.0660145,GM12878@0.162531,H1HESC@0.0463145,HELAS3@0.030707,HEPG2@0,HMEC@0.013061,HSMM@0.0360025,HUVEC@0.0431215,K562@0.11685,MCF7@0.032356,NHEK@0.094637,NHLF@0.003112,SKNSHRA@0.0072495, 0 0 0 0 ENSG00000234572.1 ENST00000445865.1 chr2:65073264-65090760 5 1972 15516 intergenic 2.63 0 1,1,1 0 0,0,0 0 7.07656612529002 29.812 5.53752535496957 14.0159835009023 59.276 8.5578093306288 16.417504511472 59.804 0 0 cat,chimp,horse,human,macaque,marmoset,orangutan,panda, lincRNA lincRNA A549@0.002196,AG04450@0.001191,BJ@0,GM12878@0.206231,H1HESC@0.02449,HELAS3@0.0023645,HEPG2@0.0062945,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0.00396233,NHLF@0,SKNSHRA@0.019132, 0 0 0 0 ENSG00000237638.1 ENST00000449259.1 chr2:65128974-65132271 2 2926 369 intergenic 5.09 1 0,0,1 0 0,0,0 0 44.3577235772358 0 0 79.0216802168022 2.151 0 95.1382113821138 2.187 0 0 chimp,horse,human,macaque,orangutan, lincRNA lincRNA A549@0.0046075,AG04450@0,BJ@0.008842,GM12878@5.25063,H1HESC@0.03785,HELAS3@0.0014255,HEPG2@0.0037265,HMEC@0,HSMM@0,HUVEC@0,K562@0.0036575,MCF7@0.0819345,NHEK@0.00472467,NHLF@0,SKNSHRA@0.0037365, 0 0 0 0 ENSG00000232613.1 ENST00000415327.1 chr2:65257861-65264631 3 492 6274 intergenic -2.37 0 0,1,1 0 0,0,0 16.8292682926829 6.77797258527255 0 0 7.02215492508766 0 0 8.85145043034747 0 0 0 cat,chimp,cow,elephant,human,macaque,marmoset,orangutan,panda,pig, antisense antisense A549@0.0336345,AG04450@0,BJ@0.019073,GM12878@0.157896,H1HESC@0.224555,HELAS3@0.244021,HEPG2@0.256569,HMEC@0.004022,HSMM@0.0060635,HUVEC@0.030565,K562@0.181463,MCF7@0.092545,NHEK@0.033267,NHLF@0,SKNSHRA@0.162772, 0 0 0 0 ENSG00000232613.1 ENST00000430134.1 chr2:65257881-65280151 3 1015 21251 intergenic -4.16 0 0,1,1 0 0,0,0 8.1576354679803 2.48764764011105 0 0 2.79111571220178 0 0 6.91859206625571 0 0 0 chimp,guinea_pig,human,macaque,marmoset,mouse,orangutan, antisense antisense A549@0.0336345,AG04450@0,BJ@0.019073,GM12878@0.157896,H1HESC@0.224555,HELAS3@0.244021,HEPG2@0.256569,HMEC@0.004022,HSMM@0.0060635,HUVEC@0.030565,K562@0.181463,MCF7@0.092545,NHEK@0.033267,NHLF@0,SKNSHRA@0.162772, 0 0 0 0 ENSG00000232693.2 ENST00000419244.2 chr2:65600834-65607819 4 526 6453 intronic 0.78 0 0,1,0 0 0,0,0 52.3802281368821 4.82845188284519 0 21.0969581749049 13.4683093134976 1.24 22.43536121673 15.2736711607004 1.255 0 0 cat,chimp,cow,dog,elephant,human,macaque,marmoset,orangutan,panda,pig,rabbit, processed_transcript processed_transcript A549@0.018225,AG04450@0.033945,BJ@0.0175645,GM12878@0,H1HESC@0.0161485,HELAS3@0.015973,HEPG2@0.036518,HMEC@0,HSMM@0,HUVEC@0,K562@0.0310975,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0.034014, 0 0 0 0 ENSG00000204929.6 ENST00000536804.1 chr2:65663864-65710280 4 426 45984 intergenic -0.90 0 0,1,0 1 0,0,0 183.399061032864 6.50417536534447 268.028 21.3051643192488 10.6743215031315 129.898 28.7558685446009 11.9633785664579 119.731 0 0 chimp,human,macaque,marmoset,orangutan,pig, lincRNA processed_transcript A549@0.044505,AG04450@0.17267,BJ@0.545695,GM12878@0.0378725,H1HESC@0.0133025,HELAS3@0.14179,HEPG2@0.282732,HMEC@0.00869,HSMM@0.230412,HUVEC@0,K562@1.0178,MCF7@0.0317475,NHEK@0.054828,NHLF@0.375187,SKNSHRA@0.731926, 0 0 0 0 ENSG00000204929.6 ENST00000377977.3 chr2:65663864-65919319 5 1261 254186 intergenic 6.16 0 0,1,1 1 0,0,0 61.9571768437748 25.6932521854075 268.028 26.2426645519429 27.1167845593385 129.898 199.781126090404 32.6712171402044 119.731 0 0 chimp,elephant,guinea_pig,horse,human,macaque,marmoset,mouse,orangutan,rat, lincRNA processed_transcript A549@0.044505,AG04450@0.17267,BJ@0.545695,GM12878@0.0378725,H1HESC@0.0133025,HELAS3@0.14179,HEPG2@0.282732,HMEC@0.00869,HSMM@0.230412,HUVEC@0,K562@1.0178,MCF7@0.0317475,NHEK@0.054828,NHLF@0.375187,SKNSHRA@0.731926, 0 0 0 0 ENSG00000234255.2 ENST00000453714.2 chr2:65677487-65682831 2 443 4899 intergenic -4.79 0 0,0,0 0 0,0,0 0 11.5537864870382 0 11.6320541760722 9.15064298836497 64.945 17.4469525959368 9.79893855888957 65.326 0 0 cat,chimp,elephant,horse,human,macaque,marmoset,orangutan,panda,pig, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000235725.1 ENST00000420724.1 chr2:65816700-65867311 4 1652 48953 intergenic 4.30 0 0,0,0 0 0,0,0 0 39.7557453067228 8.36 1.94854721549637 47.2029089126305 31.791 2.03450363196126 47.8580883704778 33.88 0 0 chimp,human,macaque,marmoset,orangutan, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0.0035385,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0.00318367,NHLF@0,SKNSHRA@0.00549, 0 0 0 0 ENSG00000204929.6 ENST00000414811.1 chr2:65958809-65997238 5 551 37870 intergenic 1.31 0 0,1,0 0 0,0,0 0 26.6959334565619 147.386 0 36.312410879324 118.732 0 36.2127277528387 119.583 0 0 chimp,human,macaque,marmoset,orangutan, lincRNA processed_transcript A549@0.044505,AG04450@0.17267,BJ@0.545695,GM12878@0.0378725,H1HESC@0.0133025,HELAS3@0.14179,HEPG2@0.282732,HMEC@0.00869,HSMM@0.230412,HUVEC@0,K562@1.0178,MCF7@0.0317475,NHEK@0.054828,NHLF@0.375187,SKNSHRA@0.731926, 0 0 0 0 ENSG00000204929.6 ENST00000441506.1 chr2:65960027-65982045 4 484 21528 intergenic -1.87 1 0,0,1 0 0,0,0 0 31.9510869565217 0 0 36.7440542549238 1.785 0 35.8962746191007 1.855 0 0 cat,chimp,cow,dog,guinea_pig,human,macaque,marmoset,orangutan,rabbit, lincRNA processed_transcript A549@0.044505,AG04450@0.17267,BJ@0.545695,GM12878@0.0378725,H1HESC@0.0133025,HELAS3@0.14179,HEPG2@0.282732,HMEC@0.00869,HSMM@0.230412,HUVEC@0,K562@1.0178,MCF7@0.0317475,NHEK@0.054828,NHLF@0.375187,SKNSHRA@0.731926, 0 0 0 0 ENSG00000204929.6 ENST00000412986.1 chr2:66124756-66126649 2 424 1467 intergenic -4.91 0 0,0,0 0 0,0,0 0 0 0 13.7004716981132 0 3.472 17.2216981132075 0 3.626 0 0 cat,chimp,cow,dog,elephant,guinea_pig,horse,human,macaque,marmoset,orangutan,panda,pig, lincRNA processed_transcript A549@0.044505,AG04450@0.17267,BJ@0.545695,GM12878@0.0378725,H1HESC@0.0133025,HELAS3@0.14179,HEPG2@0.282732,HMEC@0.00869,HSMM@0.230412,HUVEC@0,K562@1.0178,MCF7@0.0317475,NHEK@0.054828,NHLF@0.375187,SKNSHRA@0.731926, 0 0 0 0 ENSG00000227293.1 ENST00000411785.1 chr2:66462509-66463345 2 364 470 intergenic -0.39 1 0,1,0 0 0,0,0 34.7527472527473 34.1170212765957 32.144 0 22.036170212766 71.788 0 21.3234042553191 70.347 0 0 cat,chimp,elephant,guinea_pig,horse,human,macaque,marmoset,orangutan,panda,rabbit, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0.264387,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0.0670985,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000225815.2 ENST00000412313.1 chr2:66554481-66555775 2 1022 270 intergenic -0.45 0 0,0,0 0 0,0,0 206.466731898239 304.240740740741 22.473 238.953033268102 484.503703703704 39.628 262.111545988258 563.666666666667 50.759 0 0 cat,chimp,cow,dog,elephant,guinea_pig,horse,human,macaque,marmoset,mouse,orangutan,panda,pig,rabbit, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 102 2 57 2 ENSG00000241254.1 ENST00000437790.1 chr2:66554481-66555973 3 771 717 intergenic -0.45 0 0,0,0 0 0,0,0 164.11673151751 231.624825662483 22.473 208.942931258106 297.810320781032 39.628 240.111543450065 327.083682008368 50.759 0 0 cat,chimp,cow,dog,elephant,guinea_pig,horse,human,macaque,marmoset,orangutan,panda,pig,rabbit, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0.0475135,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 102 2 57 2 ENSG00000225815.2 ENST00000449673.1 chr2:66554493-66556116 3 902 717 intergenic -0.45 0 0,0,0 0 0,0,0 140.281596452328 231.624825662483 22.473 177.30376940133 297.810320781032 41.184 201.694013303769 327.083682008368 54.084 0 0 cat,chimp,cow,dog,elephant,guinea_pig,horse,human,macaque,marmoset,orangutan,panda,pig,rabbit, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000232164.1 ENST00000428647.1 chr2:66610438-66619582 3 1676 7464 intergenic 2.18 0 0,0,0 0 0,0,0 26.1193317422434 110.373526259378 0 15.313245823389 104.41063772776 32.992 14.1473747016706 113.366961414791 37.018 0 0 chimp,human,macaque,orangutan, lincRNA lincRNA A549@0,AG04450@0,BJ@0.0029325,GM12878@0,H1HESC@0.153042,HELAS3@0.0351175,HEPG2@0.0194955,HMEC@0.014632,HSMM@0,HUVEC@0.003545,K562@0.008117,MCF7@0.488149,NHEK@0.0844623,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000226819.1 ENST00000454167.1 chr2:66653867-66660602 4 703 6026 intergenic -1.07 0 0,1,1 0 0,0,0 65.6529160739687 98.7826086956522 146.124 64.7596017069701 135.453866578161 234.785 56.2332859174964 140.281613010289 196.183 0 0 cat,chimp,cow,elephant,guinea_pig,horse,human,macaque,marmoset,orangutan,panda,pig,rabbit, antisense antisense A549@0.0092105,AG04450@0.138547,BJ@0.014215,GM12878@0,H1HESC@0,HELAS3@0.0623105,HEPG2@0.031164,HMEC@0.092224,HSMM@0,HUVEC@0.006878,K562@0,MCF7@0.0389175,NHEK@0.00275567,NHLF@0.0443805,SKNSHRA@0.403021, 0 0 0 0 ENSG00000230749.2 ENST00000439433.1 chr2:66666220-66667444 2 688 534 exonic -1.01 0 0,1,0 0 0,0,0 180.908430232558 227.093632958801 306.49 176.888081395349 255.460674157303 241.696 166.357558139535 279.397003745318 228.328 0 0 cat,chimp,cow,elephant,guinea_pig,horse,human,macaque,marmoset,mouse,orangutan,panda,pig,rabbit,rat, antisense antisense A549@0,AG04450@0,BJ@0.012938,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0.0062675,K562@0,MCF7@0,NHEK@0,NHLF@0.003493,SKNSHRA@0, 133 2 81 2 ENSG00000244522.1 ENST00000454595.1 chr2:66666575-66668968 2 584 1807 exonic -6.81 0 0,1,1 0 0,0,0 299.493150684931 283.899833978971 406.168 307.876712328767 255.016048699502 370.864 351.803082191781 255.84947426674 358.373 0 0 chimp,cow,elephant,guinea_pig,horse,human,macaque,marmoset,mouse,opossum,orangutan,pig,rabbit,rat, antisense antisense A549@0,AG04450@0.0269745,BJ@0.057283,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0.0288315,K562@0,MCF7@0,NHEK@0,NHLF@0.009612,SKNSHRA@0.006384, 133 2 81 2 ENSG00000230749.2 ENST00000458376.1 chr2:66666575-66668968 2 584 1807 exonic -6.81 0 0,1,1 0 0,0,0 299.493150684931 283.899833978971 406.168 307.876712328767 255.016048699502 370.864 351.803082191781 255.84947426674 358.373 0 0 chimp,cow,elephant,guinea_pig,horse,human,macaque,marmoset,mouse,opossum,orangutan,pig,rabbit,rat, antisense antisense A549@0,AG04450@0,BJ@0.012938,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0.0062675,K562@0,MCF7@0,NHEK@0,NHLF@0.003493,SKNSHRA@0, 0 0 0 0 ENSG00000244522.1 ENST00000421204.1 chr2:66666580-66667470 2 354 534 exonic 0 0 0,1,1 0 0,0,0 238.079096045198 227.093632958801 320.088 229.748587570621 255.460674157303 249.719 234.601694915254 279.397003745318 236.087 0 0 chimp,guinea_pig,horse,human,macaque,marmoset,orangutan,panda,rat, antisense antisense A549@0,AG04450@0.0269745,BJ@0.057283,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0.0288315,K562@0,MCF7@0,NHEK@0,NHLF@0.009612,SKNSHRA@0.006384, 0 0 0 0 ENSG00000232046.1 ENST00000433396.1 chr2:66801162-66922637 6 676 120789 intergenic 1.74 0 0,1,0 0 0,0,0 323.883136094675 66.096813451556 419.036 334.755917159763 71.6642657857918 362.872 380.298816568047 72.9487784483686 379.649 0 0 cat,chimp,cow,guinea_pig,human,macaque,marmoset,mouse,opossum,orangutan,panda,rabbit,rat, lincRNA lincRNA A549@0,AG04450@0.0213565,BJ@0.024068,GM12878@0,H1HESC@0.0106605,HELAS3@0,HEPG2@0.003124,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0.0494995, 0 0 0 0 ENSG00000232046.1 ENST00000423168.1 chr2:66917000-66922713 3 552 5157 intergenic -3.01 0 0,0,0 0 0,0,0 450.179347826087 250.220864843902 270 425.432971014493 295.457436494086 334.896 462.844202898551 286.390343222804 349.028 0 0 cat,chimp,cow,dog,elephant,guinea_pig,horse,human,macaque,marmoset,mouse,opossum,orangutan,panda,pig,platypus,rabbit,rat, lincRNA lincRNA A549@0,AG04450@0.0213565,BJ@0.024068,GM12878@0,H1HESC@0.0106605,HELAS3@0,HEPG2@0.003124,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0.0494995, 0 0 0 0 ENSG00000232046.1 ENST00000443420.1 chr2:66918567-66922597 2 550 3478 intergenic 0 0 0,0,0 0 0,0,0 537.847272727273 257.41058079356 246.516 539.261818181818 347.510925819436 152.95 617.838181818182 322.910293271995 170.869 0 0 cat,chimp,cow,dog,elephant,guinea_pig,horse,human,macaque,marmoset,mouse,opossum,orangutan,panda,pig,platypus,rabbit,rat, lincRNA retained_intron A549@0,AG04450@0.0213565,BJ@0.024068,GM12878@0,H1HESC@0.0106605,HELAS3@0,HEPG2@0.003124,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0.0494995, 0 0 0 0 ENSG00000232046.1 ENST00000435389.1 chr2:66918567-66922715 3 543 3601 intergenic 0 0 0,0,0 0 0,0,0 546.042357274402 270.034712579839 246.516 563.484346224678 358.047209108581 152.95 624.7605893186 338.24993057484 170.869 0 0 cat,chimp,cow,dog,elephant,guinea_pig,horse,human,macaque,marmoset,mouse,opossum,orangutan,panda,pig,platypus,rabbit,rat, lincRNA lincRNA A549@0,AG04450@0.0213565,BJ@0.024068,GM12878@0,H1HESC@0.0106605,HELAS3@0,HEPG2@0.003124,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0.0494995, 0 0 0 0 ENSG00000232046.1 ENST00000428590.1 chr2:66918570-66942762 5 548 23636 intergenic -3.91 0 0,0,0 0 0,0,0 208.908759124088 157.888771365713 248.397 278.122262773723 175.638136740565 155.092 292.419708029197 171.653663902522 173.185 0 0 chimp,human,macaque,marmoset,orangutan, lincRNA lincRNA A549@0,AG04450@0.0213565,BJ@0.024068,GM12878@0,H1HESC@0.0106605,HELAS3@0,HEPG2@0.003124,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0.0494995, 0 0 0 0 ENSG00000232046.1 ENST00000412944.1 chr2:66918578-66957289 5 523 38180 intergenic 0 0 0,0,0 0 0,0,0 378.839388145316 107.614614981666 253.413 452.391969407266 122.5553693033 160.804 488.627151051625 121.073860660031 179.361 0 0 chimp,cow,human,macaque,marmoset,orangutan,pig, lincRNA lincRNA A549@0,AG04450@0.0213565,BJ@0.024068,GM12878@0,H1HESC@0.0106605,HELAS3@0,HEPG2@0.003124,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0.0494995, 0 0 0 0 ENSG00000237179.1 ENST00000433432.1 chr2:66924257-66930359 3 762 5336 intergenic 0.28 0 0,0,1 0 0,0,0 535.712598425197 262.342578710645 0 583.103674540682 279.3988005997 0 577.501312335958 265.723013493254 0 0 0 chimp,cow,dog,elephant,guinea_pig,horse,human,macaque,marmoset,opossum,orangutan,panda,pig,rabbit, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0.0049905,NHEK@0,NHLF@0,SKNSHRA@0.0110235, 0 0 0 0 ENSG00000237179.1 ENST00000432410.1 chr2:66924290-66930329 2 216 5821 intergenic 0 0 0,0,1 0 0,0,0 158.791666666667 303.64026799519 0 81.1666666666667 328.690431197389 0 51.1296296296296 315.98745919945 0 0 0 cat,chimp,cow,elephant,guinea_pig,horse,human,macaque,marmoset,orangutan,panda,pig,rabbit, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0.0049905,NHEK@0,NHLF@0,SKNSHRA@0.0110235, 0 0 0 0 ENSG00000237179.1 ENST00000451698.1 chr2:66924294-66930329 3 409 5622 intergenic 0.28 0 0,0,1 0 0,0,0 448.960880195599 287.55745286375 0 462.393643031785 309.494485948061 0 445.567237163814 296.412664532195 0 0 0 cat,chimp,cow,dog,elephant,guinea_pig,horse,human,macaque,marmoset,mouse,opossum,orangutan,panda,pig,rabbit,rat, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0.0049905,NHEK@0,NHLF@0,SKNSHRA@0.0110235, 0 0 0 0 ENSG00000230525.1 ENST00000426260.1 chr2:67131568-67198594 5 620 66398 intergenic 6.02 1 0,0,0 0 0,0,0 0 47.997033043164 342.805 24.308064516129 53.763170577427 332.388 17.8129032258065 54.9991415404078 300.017 0 0 cat,chimp,cow,dog,elephant,human,macaque,marmoset,mouse,orangutan,pig,rabbit,rat, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0.0278725, 0 0 0 0 ENSG00000232688.1 ENST00000444266.1 chr2:67148642-67149589 3 394 549 intergenic -2.54 0 0,0,1 0 0,0,0 0 0 0 0 0 4.416 0 0 4.624 0 0 cat,chimp,cow,horse,human,macaque,marmoset,orangutan, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000230525.1 ENST00000411701.1 chr2:67148826-67186052 3 383 36839 intergenic -1.19 0 0,0,0 0 0,0,0 0 42.4871467737995 197.024 0 45.3066587040908 122.832 0 46.8793941203616 127.093 0 0 chimp,cow,dog,horse,human,macaque,marmoset,orangutan,panda,pig,rabbit, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0.0278725, 0 0 0 0 ENSG00000223859.1 ENST00000427579.1 chr2:67267678-67269098 2 565 853 intergenic -7.20 0 0,0,0 0 0,0,0 0 0 78.147 0 0 38.254 6.0212389380531 0 40.02 0 0 cat,chimp,dog,horse,human,macaque,marmoset,orangutan,panda,rabbit, lincRNA lincRNA A549@0,AG04450@0.0041535,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000235885.2 ENST00000452716.1 chr2:67313578-67523207 6 1068 208551 intergenic -2.14 0 0,1,1 0 0,0,0 67.938202247191 36.7608930189738 0 72.2612359550562 42.5096451227758 4.216 73.3295880149813 45.4522395001702 6.048 0 0 cat,chimp,cow,dog,elephant,guinea_pig,horse,human,macaque,marmoset,mouse,opossum,orangutan,panda,rabbit, lincRNA lincRNA A549@0.0076435,AG04450@0.046333,BJ@0.013523,GM12878@0,H1HESC@0,HELAS3@0.0672185,HEPG2@0.014507,HMEC@0,HSMM@0.0021225,HUVEC@0,K562@0,MCF7@0,NHEK@0.00237733,NHLF@0.007898,SKNSHRA@0.180746, 0 0 0 0 ENSG00000236780.1 ENST00000433133.1 chr2:67350489-67442451 8 2092 89856 intergenic 0.56 0 0,0,0 0 0,0,0 50.208413001912 34.1022858796296 234.044 70.0478011472275 37.3460536858974 213.625 68.381931166348 42.8271679131054 210.204 0 0 cat,chimp,cow,dog,elephant,guinea_pig,horse,human,macaque,marmoset,mouse,opossum,orangutan,panda,pig,rabbit, lincRNA lincRNA A549@0.002894,AG04450@0.0753555,BJ@0.0192795,GM12878@0.0144905,H1HESC@0.191115,HELAS3@0.002152,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0.0142705,K562@0.00357,MCF7@0.0107285,NHEK@0.0167257,NHLF@0.0122825,SKNSHRA@0.138814, 0 0 0 0 ENSG00000236780.1 ENST00000447453.1 chr2:67351802-67405124 3 747 52571 intergenic 3.90 0 0,1,1 0 0,0,0 56.1204819277108 35.8486998535314 0 85.4886211512717 31.3928211371288 0 91.1593038821955 39.1054383595519 0 0 0 chimp,dog,elephant,horse,human,macaque,orangutan,panda,pig, lincRNA lincRNA A549@0.002894,AG04450@0.0753555,BJ@0.0192795,GM12878@0.0144905,H1HESC@0.191115,HELAS3@0.002152,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0.0142705,K562@0.00357,MCF7@0.0107285,NHEK@0.0167257,NHLF@0.0122825,SKNSHRA@0.138814, 0 0 0 0 ENSG00000236780.1 ENST00000414404.1 chr2:67402555-67442409 5 566 39280 intergenic 2.91 0 0,0,0 0 0,0,0 38.1678445229682 30.032917515275 212.624 34.3604240282686 43.4898930753564 192.457 28.6077738515901 45.9121690427698 185.34 0 0 cat,chimp,cow,elephant,guinea_pig,horse,human,macaque,marmoset,orangutan,pig,rabbit, lincRNA lincRNA A549@0.002894,AG04450@0.0753555,BJ@0.0192795,GM12878@0.0144905,H1HESC@0.191115,HELAS3@0.002152,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0.0142705,K562@0.00357,MCF7@0.0107285,NHEK@0.0167257,NHLF@0.0122825,SKNSHRA@0.138814, 0 0 0 0 ENSG00000230906.1 ENST00000445514.1 chr2:67440540-67471706 4 527 30633 intergenic -0.53 0 0,0,0 0 0,0,0 51.7267552182163 46.3950641465087 95.88 78.111954459203 54.6864818986061 195.635 78.2827324478178 55.6824666209643 211.07 0 0 cat,chimp,elephant,guinea_pig,horse,human,macaque,marmoset,orangutan,panda,rabbit, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0.007861,HEPG2@0.0013725,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0.469838, 0 0 0 0 ENSG00000241455.1 ENST00000450294.1 chr2:67487935-67516526 2 715 27874 intergenic -6.51 0 0,0,0 0 0,0,0 342.786013986014 66.7640094711918 152.612 297.318881118881 70.8891081294396 82.05 293.833566433566 72.9474061849752 96.491 0 0 chimp,guinea_pig,horse,human,macaque,opossum,orangutan,panda,rabbit,rat, lincRNA lincRNA A549@0.011218,AG04450@0.009183,BJ@0.0012495,GM12878@0,H1HESC@0,HELAS3@0.0266175,HEPG2@0.0142485,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0.001716,SKNSHRA@0.237435, 0 0 0 0 ENSG00000236605.1 ENST00000450944.1 chr2:67551759-67552436 2 572 103 intergenic 1.17 0 0,0,1 0 0,0,0 58.2167832167832 0 15.12 89.1258741258741 0 25.182 179.25 0 34.649 0 0 chimp,cow,elephant,horse,human,macaque,marmoset,orangutan,rabbit, lincRNA lincRNA A549@0,AG04450@0.02063,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0.0380175,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0.084918, 0 0 0 0 ENSG00000224173.1 ENST00000433065.1 chr2:67789199-67801176 6 1002 10965 intergenic -0.73 1 0,0,0 0 0,0,0 132.874251497006 32.0015503875969 770 124.748502994012 39.993707250342 732.865 124.59880239521 48.3056999544004 739.516 0 0 chimp,cow,dog,guinea_pig,horse,human,macaque,marmoset,orangutan,panda,pig,rabbit, lincRNA lincRNA A549@0.0086135,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0.017802,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0.012183, 0 0 0 0 ENSG00000235495.1 ENST00000419809.1 chr2:67792736-67911209 2 165 118306 intergenic 0 0 0,0,1 0 0,0,0 0 38.4793670650685 0 0 44.9172231332308 0 0 46.3976298750697 0 0 0 cat,chimp,elephant,horse,human,macaque,marmoset,orangutan,panda, lincRNA lincRNA A549@0,AG04450@0.16857,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0.024519,HSMM@0,HUVEC@0.188354,K562@0,MCF7@0,NHEK@0.0233313,NHLF@0,SKNSHRA@0.0594075, 0 0 0 0 ENSG00000237013.1 ENST00000457448.1 chr2:68023186-68052694 3 722 28782 intergenic 4.80 1 1,1,1 0 0,0,0 3.44182825484765 15.513098464318 91.729 6.73268698060942 23.9022653047043 153.227 2.3601108033241 23.6478354527135 152.909 0 0 cat,chimp,dog,elephant,guinea_pig,horse,human,macaque,marmoset,orangutan,panda,pig,rabbit, lincRNA lincRNA A549@0,AG04450@0.0971585,BJ@0.0169215,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0.028239,HSMM@0,HUVEC@0.176501,K562@0,MCF7@0.005672,NHEK@0.0178407,NHLF@0.0619,SKNSHRA@0.16461, 0 0 0 0 ENSG00000203395.2 ENST00000366218.2 chr2:68588346-68592716 2 1414 2954 intronic 1.37 0 0,1,0 0 0,0,0 0 13.7552471225457 0 7.77934936350778 20.5785375761679 2.63 7.9031117397454 21.7227488151659 2.72 0 0 chimp,human,orangutan, lincRNA processed_transcript A549@0,AG04450@0,BJ@0,GM12878@0.483034,H1HESC@0.0041105,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0.002906,HUVEC@0.0034345,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000237576.1 ENST00000415138.1 chr2:69059176-69064840 2 434 5228 intergenic -0.06 0 0,1,0 0 0,0,0 0 0.999426166794185 0 0 1.1442234123948 0 0 2.07440703902066 0 0 0 chimp,elephant,horse,human,macaque,marmoset,orangutan, antisense antisense A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000228329.1 ENST00000415448.1 chr2:69059948-69064324 2 1015 3359 intergenic 0.31 0 0,0,0 0 0,0,0 0 1.55552247692766 0 0 0.44298898481691 0 0 0.448347722536469 0 0 0 chimp,human,macaque,marmoset,orangutan, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0.00259033,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000237576.1 ENST00000457602.1 chr2:69062136-69064856 2 572 2146 intergenic 4.71 0 0,0,0 0 0,0,0 0 0 5.225 0 0 1.488 0 0 1.506 0 0 chimp,horse,human,macaque,orangutan,rabbit, antisense antisense A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000231024.1 ENST00000415342.1 chr2:69927324-69940979 2 418 13235 intergenic -1.29 0 0,1,0 0 0,0,0 0 1.46271250472233 0 0 6.12096713260295 3.113 0 11.9496788817529 3.124 0 0 NA lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0.005402, 0 0 0 0 ENSG00000248894.1 ENST00000502349.1 chr2:70016684-70026080 4 4281 5109 intronic 5.47 0 1,1,1 0 0,0,0 0 0 0 0 0 0 0 0 0 0 0 NA lincRNA lincRNA A549@0.012316,AG04450@0,BJ@0.0163605,GM12878@0.302146,H1HESC@0,HELAS3@0.012603,HEPG2@0.0013675,HMEC@0.0086,HSMM@0.010122,HUVEC@0.118282,K562@0.09474,MCF7@0.0009595,NHEK@0.0688073,NHLF@0.0113485,SKNSHRA@0.0262085, 0 0 0 0 ENSG00000179818.6 ENST00000419542.1 chr2:70189902-70223973 3 981 33086 intergenic -0.38 0 0,0,0 0 0,0,0 25.1498470948012 0.617511938584295 0 22.7747196738022 3.79136190533761 18.493 17.1029561671763 11.9446895968083 18.746 0 0 cat,chimp,cow,elephant,horse,human,macaque,marmoset,orangutan,panda, processed_transcript processed_transcript A549@5.50272,AG04450@2.05915,BJ@3.20656,GM12878@20.3751,H1HESC@8.04051,HELAS3@14.4195,HEPG2@12.2062,HMEC@1.38847,HSMM@3.04591,HUVEC@4.69775,K562@6.66481,MCF7@6.0883,NHEK@2.77866,NHLF@2.345,SKNSHRA@5.28404, 0 0 0 0 ENSG00000179818.6 ENST00000457076.1 chr2:70190520-70314452 4 538 123388 intergenic 3.21 0 0,1,0 1 0,0,0 0 4.26120044088566 761.634 90.542750929368 8.9103721593672 598.989 91.9144981412639 12.500591629656 615.098 0 0 chimp,cow,guinea_pig,human,macaque,marmoset,panda,pig,rat, processed_transcript processed_transcript A549@5.50272,AG04450@2.05915,BJ@3.20656,GM12878@20.3751,H1HESC@8.04051,HELAS3@14.4195,HEPG2@12.2062,HMEC@1.38847,HSMM@3.04591,HUVEC@4.69775,K562@6.66481,MCF7@6.0883,NHEK@2.77866,NHLF@2.345,SKNSHRA@5.28404, 0 0 0 0 ENSG00000179818.6 ENST00000413436.1 chr2:70190595-70314944 7 595 123742 exonic -2.42 0 0,1,0 0 0,0,0 31.7042016806723 7.01209775177385 786 86.1042016806723 10.9748993874351 750.603 89.3915966386555 14.5383944012542 684.689 0 0 cat,chimp,elephant,human,macaque,marmoset,orangutan,panda, processed_transcript processed_transcript A549@5.50272,AG04450@2.05915,BJ@3.20656,GM12878@20.3751,H1HESC@8.04051,HELAS3@14.4195,HEPG2@12.2062,HMEC@1.38847,HSMM@3.04591,HUVEC@4.69775,K562@6.66481,MCF7@6.0883,NHEK@2.77866,NHLF@2.345,SKNSHRA@5.28404, 0 0 0 0 ENSG00000179818.6 ENST00000418564.1 chr2:70190620-70313405 5 542 122235 intergenic -4.58 0 0,1,0 1 0,0,0 0 3.90484722051785 48.472 86.6420664206642 8.25093467501125 93.037 88.0940959409594 11.8782509101321 92.591 0 0 cat,chimp,horse,human,macaque,marmoset,orangutan,panda,pig,rabbit, processed_transcript processed_transcript A549@5.50272,AG04450@2.05915,BJ@3.20656,GM12878@20.3751,H1HESC@8.04051,HELAS3@14.4195,HEPG2@12.2062,HMEC@1.38847,HSMM@3.04591,HUVEC@4.69775,K562@6.66481,MCF7@6.0883,NHEK@2.77866,NHLF@2.345,SKNSHRA@5.28404, 0 0 0 0 ENSG00000179818.6 ENST00000415222.1 chr2:70191505-70314475 5 497 122465 intergenic 1.46 0 0,1,1 1 0,0,0 0 4.29331645776344 779.712 68.7967806841046 9.09939982852243 618.332 70.4144869215292 12.7161229739109 624.534 0 0 cat,chimp,elephant,horse,human,macaque,marmoset,orangutan,panda,pig, processed_transcript processed_transcript A549@5.50272,AG04450@2.05915,BJ@3.20656,GM12878@20.3751,H1HESC@8.04051,HELAS3@14.4195,HEPG2@12.2062,HMEC@1.38847,HSMM@3.04591,HUVEC@4.69775,K562@6.66481,MCF7@6.0883,NHEK@2.77866,NHLF@2.345,SKNSHRA@5.28404, 0 0 0 0 ENSG00000179818.6 ENST00000456161.1 chr2:70223818-70313405 5 875 88704 intergenic 5.07 0 0,1,0 1 0,0,0 0 5.15059072871573 48.472 53.6685714285714 9.95571789321789 93.037 54.568 11.9130591630592 92.591 0 0 cat,chimp,elephant,guinea_pig,horse,human,macaque,marmoset,orangutan,panda,pig, processed_transcript processed_transcript A549@5.50272,AG04450@2.05915,BJ@3.20656,GM12878@20.3751,H1HESC@8.04051,HELAS3@14.4195,HEPG2@12.2062,HMEC@1.38847,HSMM@3.04591,HUVEC@4.69775,K562@6.66481,MCF7@6.0883,NHEK@2.77866,NHLF@2.345,SKNSHRA@5.28404, 0 0 0 0 ENSG00000179818.6 ENST00000419963.1 chr2:70223826-70313405 5 559 89012 intergenic -2.42 0 0,1,0 1 0,0,0 0 5.13276861546758 48.472 84.0071556350626 9.92126904237631 93.037 85.4150268336315 11.8718375050555 92.591 0 0 cat,elephant,horse,human,macaque,marmoset,panda,pig,rabbit, processed_transcript processed_transcript A549@5.50272,AG04450@2.05915,BJ@3.20656,GM12878@20.3751,H1HESC@8.04051,HELAS3@14.4195,HEPG2@12.2062,HMEC@1.38847,HSMM@3.04591,HUVEC@4.69775,K562@6.66481,MCF7@6.0883,NHEK@2.77866,NHLF@2.345,SKNSHRA@5.28404, 0 0 0 0 ENSG00000179818.6 ENST00000418308.1 chr2:70223903-70313405 5 561 88933 intergenic -4.58 0 0,1,0 1 0,0,0 0 5.13732810092991 48.472 79.873440285205 9.93008219670989 93.037 81.2121212121212 11.882383367254 92.591 0 0 cat,chimp,horse,human,macaque,marmoset,orangutan,rabbit, processed_transcript processed_transcript A549@5.50272,AG04450@2.05915,BJ@3.20656,GM12878@20.3751,H1HESC@8.04051,HELAS3@14.4195,HEPG2@12.2062,HMEC@1.38847,HSMM@3.04591,HUVEC@4.69775,K562@6.66481,MCF7@6.0883,NHEK@2.77866,NHLF@2.345,SKNSHRA@5.28404, 0 0 0 0 ENSG00000179818.6 ENST00000452431.1 chr2:70223935-70315686 5 537 91206 exonic -0.20 0 0,1,0 1 0,0,0 181.497206703911 14.8221827511348 520.332 271.055865921788 18.3047387233296 585.494 261.756052141527 20.1076244983883 446.745 0 0 chimp,cow,dog,elephant,horse,human,macaque,marmoset,mouse,opossum,orangutan,panda,pig,rabbit,rat, processed_transcript processed_transcript A549@5.50272,AG04450@2.05915,BJ@3.20656,GM12878@20.3751,H1HESC@8.04051,HELAS3@14.4195,HEPG2@12.2062,HMEC@1.38847,HSMM@3.04591,HUVEC@4.69775,K562@6.66481,MCF7@6.0883,NHEK@2.77866,NHLF@2.345,SKNSHRA@5.28404, 0 0 0 0 ENSG00000179818.6 ENST00000423402.1 chr2:70223950-70315039 5 548 90533 exonic -0.82 0 0,1,0 0 0,0,0 172.20802919708 9.34703367832724 786 231.525547445255 13.4967249511228 763.048 255.313868613139 15.3151005710625 663.529 0 0 chimp,cow,dog,elephant,guinea_pig,horse,human,macaque,marmoset,mouse,opossum,orangutan,panda,pig,rabbit,rat, processed_transcript processed_transcript A549@5.50272,AG04450@2.05915,BJ@3.20656,GM12878@20.3751,H1HESC@8.04051,HELAS3@14.4195,HEPG2@12.2062,HMEC@1.38847,HSMM@3.04591,HUVEC@4.69775,K562@6.66481,MCF7@6.0883,NHEK@2.77866,NHLF@2.345,SKNSHRA@5.28404, 0 0 0 0 ENSG00000179818.6 ENST00000411429.1 chr2:70223955-70313405 5 542 88900 intergenic -0.20 0 0,1,0 1 0,0,0 0 5.13923509561305 48.472 99.7066420664207 9.82992125984252 93.037 113.110701107011 11.7096737907762 92.591 0 0 chimp,horse,human,macaque,marmoset,orangutan,rabbit, processed_transcript processed_transcript A549@5.50272,AG04450@2.05915,BJ@3.20656,GM12878@20.3751,H1HESC@8.04051,HELAS3@14.4195,HEPG2@12.2062,HMEC@1.38847,HSMM@3.04591,HUVEC@4.69775,K562@6.66481,MCF7@6.0883,NHEK@2.77866,NHLF@2.345,SKNSHRA@5.28404, 0 0 0 0 ENSG00000179818.6 ENST00000420309.1 chr2:70223962-70313407 5 568 88869 intergenic -0.82 0 0,1,0 1 0,0,0 1.47183098591549 5.12926892392173 48.472 97.1021126760563 9.8166514757677 93.037 109.966549295775 11.6964295761177 92.591 0 0 chimp,guinea_pig,horse,human,macaque,marmoset,orangutan,pig,rabbit, processed_transcript processed_transcript A549@5.50272,AG04450@2.05915,BJ@3.20656,GM12878@20.3751,H1HESC@8.04051,HELAS3@14.4195,HEPG2@12.2062,HMEC@1.38847,HSMM@3.04591,HUVEC@4.69775,K562@6.66481,MCF7@6.0883,NHEK@2.77866,NHLF@2.345,SKNSHRA@5.28404, 0 0 0 0 ENSG00000179818.6 ENST00000434781.1 chr2:70224003-70314447 5 560 89876 intergenic 3.21 0 0,1,0 1 0,0,0 0 5.622746895723 757.704 88.3142857142857 10.8020939961725 594.784 89.6910714285714 12.7286261070809 612.683 0 0 chimp,guinea_pig,horse,human,macaque,marmoset,panda,pig,rat, processed_transcript processed_transcript A549@5.50272,AG04450@2.05915,BJ@3.20656,GM12878@20.3751,H1HESC@8.04051,HELAS3@14.4195,HEPG2@12.2062,HMEC@1.38847,HSMM@3.04591,HUVEC@4.69775,K562@6.66481,MCF7@6.0883,NHEK@2.77866,NHLF@2.345,SKNSHRA@5.28404, 0 0 0 0 ENSG00000179818.6 ENST00000415742.1 chr2:70242672-70313230 6 558 69990 intergenic -0.82 0 0,0,0 1 0,0,0 1.49820788530466 6.51283040434348 48.472 75.9605734767025 10.7521645949421 99.664 89.0860215053763 12.65735105015 99.179 0 0 chimp,guinea_pig,human,macaque,marmoset,orangutan, processed_transcript processed_transcript A549@5.50272,AG04450@2.05915,BJ@3.20656,GM12878@20.3751,H1HESC@8.04051,HELAS3@14.4195,HEPG2@12.2062,HMEC@1.38847,HSMM@3.04591,HUVEC@4.69775,K562@6.66481,MCF7@6.0883,NHEK@2.77866,NHLF@2.345,SKNSHRA@5.28404, 0 0 0 0 ENSG00000179818.6 ENST00000457770.1 chr2:70245199-70313406 5 542 67657 intergenic -0.20 0 0,1,0 1 0,0,0 0 6.75285631937567 48.472 99.7066420664207 11.1448630592548 93.037 113.110701107011 13.1165733035754 92.591 0 0 chimp,guinea_pig,horse,human,macaque,marmoset,orangutan,pig,rabbit, processed_transcript processed_transcript A549@5.50272,AG04450@2.05915,BJ@3.20656,GM12878@20.3751,H1HESC@8.04051,HELAS3@14.4195,HEPG2@12.2062,HMEC@1.38847,HSMM@3.04591,HUVEC@4.69775,K562@6.66481,MCF7@6.0883,NHEK@2.77866,NHLF@2.345,SKNSHRA@5.28404, 0 0 0 0 ENSG00000179818.6 ENST00000416395.1 chr2:70257130-70313399 5 2446 53815 intergenic 4.68 1 1,1,1 1 0,0,0 53.1267375306623 5.61148378704822 48.472 67.8540474243663 11.0736969246493 92.737 69.0159443990188 13.2958283006597 92.258 0 0 chimp,human,macaque,marmoset,orangutan, processed_transcript processed_transcript A549@5.50272,AG04450@2.05915,BJ@3.20656,GM12878@20.3751,H1HESC@8.04051,HELAS3@14.4195,HEPG2@12.2062,HMEC@1.38847,HSMM@3.04591,HUVEC@4.69775,K562@6.66481,MCF7@6.0883,NHEK@2.77866,NHLF@2.345,SKNSHRA@5.28404, 0 0 0 0 ENSG00000179818.6 ENST00000366234.3 chr2:70258565-70314132 5 879 54680 intergenic 4.68 0 0,1,1 1 0,0,0 4.26237054085155 6.24468824282319 514.655 54.5063291139241 12.0332601938197 424.156 62.8515535097814 14.0932345949899 432.473 0 0 chimp,human,macaque,marmoset,orangutan, processed_transcript processed_transcript A549@5.50272,AG04450@2.05915,BJ@3.20656,GM12878@20.3751,H1HESC@8.04051,HELAS3@14.4195,HEPG2@12.2062,HMEC@1.38847,HSMM@3.04591,HUVEC@4.69775,K562@6.66481,MCF7@6.0883,NHEK@2.77866,NHLF@2.345,SKNSHRA@5.28404, 0 0 0 0 ENSG00000179818.6 ENST00000425333.1 chr2:70258885-70314475 5 541 55041 intergenic 4.68 0 0,1,1 1 0,0,0 0 6.36714449228757 779.712 60.6007393715342 12.74933231591 618.332 62.0813308687616 14.9135553496484 624.534 0 0 chimp,human,macaque,marmoset,orangutan, processed_transcript processed_transcript A549@5.50272,AG04450@2.05915,BJ@3.20656,GM12878@20.3751,H1HESC@8.04051,HELAS3@14.4195,HEPG2@12.2062,HMEC@1.38847,HSMM@3.04591,HUVEC@4.69775,K562@6.66481,MCF7@6.0883,NHEK@2.77866,NHLF@2.345,SKNSHRA@5.28404, 0 0 0 0 ENSG00000179818.6 ENST00000425601.1 chr2:70258973-70313405 5 540 53884 intergenic -4.58 0 1,1,1 1 0,0,0 0 5.60429812189147 48.472 84.3574074074074 11.059516739663 93.037 85.8092592592592 13.2788026130206 92.591 0 0 chimp,horse,human,marmoset,orangutan,panda, processed_transcript processed_transcript A549@5.50272,AG04450@2.05915,BJ@3.20656,GM12878@20.3751,H1HESC@8.04051,HELAS3@14.4195,HEPG2@12.2062,HMEC@1.38847,HSMM@3.04591,HUVEC@4.69775,K562@6.66481,MCF7@6.0883,NHEK@2.77866,NHLF@2.345,SKNSHRA@5.28404, 0 0 0 0 ENSG00000179818.6 ENST00000449178.1 chr2:70259017-70313405 6 533 53845 intergenic -2.42 0 1,1,1 1 0,0,0 0 5.60835732194261 48.472 85.4652908067542 11.0675271612963 93.037 86.9362101313321 13.2884204661528 92.591 0 0 cat,chimp,horse,human,macaque,marmoset,orangutan,panda, processed_transcript processed_transcript A549@5.50272,AG04450@2.05915,BJ@3.20656,GM12878@20.3751,H1HESC@8.04051,HELAS3@14.4195,HEPG2@12.2062,HMEC@1.38847,HSMM@3.04591,HUVEC@4.69775,K562@6.66481,MCF7@6.0883,NHEK@2.77866,NHLF@2.345,SKNSHRA@5.28404, 0 0 0 0 ENSG00000179818.6 ENST00000458686.1 chr2:70259270-70313386 8 1012 53090 intergenic -0.22 0 0,1,0 1 0,0,0 0.826086956521739 5.66843096628367 48.472 48.0790513833992 11.0230740252402 98.275 55.449604743083 13.1517988321718 97.705 0 0 chimp,guinea_pig,human,macaque,marmoset,orangutan, processed_transcript processed_transcript A549@5.50272,AG04450@2.05915,BJ@3.20656,GM12878@20.3751,H1HESC@8.04051,HELAS3@14.4195,HEPG2@12.2062,HMEC@1.38847,HSMM@3.04591,HUVEC@4.69775,K562@6.66481,MCF7@6.0883,NHEK@2.77866,NHLF@2.345,SKNSHRA@5.28404, 0 0 0 0 ENSG00000179818.6 ENST00000421843.1 chr2:70259270-70313401 5 659 53464 intergenic -0.20 0 0,1,0 1 0,0,0 0 5.64832410594045 48.472 81.8406676783005 10.9737206344456 92.411 92.9362670713202 13.0886016758941 91.95 0 0 chimp,horse,human,macaque,marmoset,orangutan,pig,rabbit, processed_transcript processed_transcript A549@5.50272,AG04450@2.05915,BJ@3.20656,GM12878@20.3751,H1HESC@8.04051,HELAS3@14.4195,HEPG2@12.2062,HMEC@1.38847,HSMM@3.04591,HUVEC@4.69775,K562@6.66481,MCF7@6.0883,NHEK@2.77866,NHLF@2.345,SKNSHRA@5.28404, 0 0 0 0 ENSG00000179818.6 ENST00000432604.1 chr2:70259270-70313525 6 563 53682 intergenic -0.82 0 0,1,0 1 0,0,0 1.48490230905861 5.60592004768824 81.484 76.607460035524 11.2623598226594 110.965 89.6749555950266 13.368577921836 109.747 0 0 chimp,elephant,human,macaque,marmoset,orangutan,panda, processed_transcript processed_transcript A549@5.50272,AG04450@2.05915,BJ@3.20656,GM12878@20.3751,H1HESC@8.04051,HELAS3@14.4195,HEPG2@12.2062,HMEC@1.38847,HSMM@3.04591,HUVEC@4.69775,K562@6.66481,MCF7@6.0883,NHEK@2.77866,NHLF@2.345,SKNSHRA@5.28404, 0 0 0 0 ENSG00000179818.6 ENST00000421255.1 chr2:70259271-70312705 7 687 52735 intergenic -0.22 0 0,1,0 0 0,0,0 0 5.72640561297051 0 44.0363901018923 11.1254195505831 37.157 54.2387190684134 13.2695363610505 37.536 0 0 cat,chimp,human,macaque,marmoset,orangutan, processed_transcript processed_transcript A549@5.50272,AG04450@2.05915,BJ@3.20656,GM12878@20.3751,H1HESC@8.04051,HELAS3@14.4195,HEPG2@12.2062,HMEC@1.38847,HSMM@3.04591,HUVEC@4.69775,K562@6.66481,MCF7@6.0883,NHEK@2.77866,NHLF@2.345,SKNSHRA@5.28404, 0 0 0 0 ENSG00000179818.6 ENST00000422515.1 chr2:70259275-70313401 5 585 53533 intergenic -0.20 0 0,1,0 1 0,0,0 0 5.64104384211608 48.472 92.1931623931624 10.9595763360918 92.411 104.692307692308 13.071731455364 91.95 0 0 chimp,horse,human,macaque,marmoset,orangutan,panda,rabbit, processed_transcript processed_transcript A549@5.50272,AG04450@2.05915,BJ@3.20656,GM12878@20.3751,H1HESC@8.04051,HELAS3@14.4195,HEPG2@12.2062,HMEC@1.38847,HSMM@3.04591,HUVEC@4.69775,K562@6.66481,MCF7@6.0883,NHEK@2.77866,NHLF@2.345,SKNSHRA@5.28404, 0 0 0 0 ENSG00000179818.6 ENST00000413069.1 chr2:70259330-70313617 6 557 53720 intergenic 5.07 0 0,1,0 1 0,0,0 1.50089766606822 5.60195457930007 153.796 77.4326750448833 11.2543931496649 171.961 90.640933572711 13.359121370067 168.995 0 0 chimp,human,macaque,marmoset,orangutan,panda, processed_transcript processed_transcript A549@5.50272,AG04450@2.05915,BJ@3.20656,GM12878@20.3751,H1HESC@8.04051,HELAS3@14.4195,HEPG2@12.2062,HMEC@1.38847,HSMM@3.04591,HUVEC@4.69775,K562@6.66481,MCF7@6.0883,NHEK@2.77866,NHLF@2.345,SKNSHRA@5.28404, 0 0 0 0 ENSG00000179818.6 ENST00000444410.1 chr2:70259361-70314147 7 548 54226 intergenic -0.82 0 0,1,0 1 0,0,0 16.1368613138686 6.27331907203187 522.86 98.7116788321168 12.121178032678 428.581 111.739051094891 14.199387747575 437.708 0 0 chimp,human,orangutan, processed_transcript processed_transcript A549@5.50272,AG04450@2.05915,BJ@3.20656,GM12878@20.3751,H1HESC@8.04051,HELAS3@14.4195,HEPG2@12.2062,HMEC@1.38847,HSMM@3.04591,HUVEC@4.69775,K562@6.66481,MCF7@6.0883,NHEK@2.77866,NHLF@2.345,SKNSHRA@5.28404, 0 0 0 0 ENSG00000179818.6 ENST00000458698.1 chr2:70273654-70314436 5 625 40149 intergenic 0.64 0 0,1,1 1 0,0,0 0 5.88253754763506 749.058 66.0368 10.3804079802735 590.199 77.688 11.6777503798351 607.708 0 0 cat,chimp,cow,dog,guinea_pig,horse,human,macaque,marmoset,orangutan,panda,rabbit, processed_transcript processed_transcript A549@5.50272,AG04450@2.05915,BJ@3.20656,GM12878@20.3751,H1HESC@8.04051,HELAS3@14.4195,HEPG2@12.2062,HMEC@1.38847,HSMM@3.04591,HUVEC@4.69775,K562@6.66481,MCF7@6.0883,NHEK@2.77866,NHLF@2.345,SKNSHRA@5.28404, 0 0 0 0 ENSG00000179818.6 ENST00000413791.1 chr2:70275819-70314553 5 738 37988 intergenic 2.10 0 0,1,1 1 0,0,0 73.4878048780488 6.21717384437191 786 113.421409214092 10.8534010740234 640.835 121.640921409214 12.1598662735601 640.55 0 0 chimp,cow,horse,human,macaque,marmoset,orangutan,panda,pig, processed_transcript processed_transcript A549@5.50272,AG04450@2.05915,BJ@3.20656,GM12878@20.3751,H1HESC@8.04051,HELAS3@14.4195,HEPG2@12.2062,HMEC@1.38847,HSMM@3.04591,HUVEC@4.69775,K562@6.66481,MCF7@6.0883,NHEK@2.77866,NHLF@2.345,SKNSHRA@5.28404, 0 0 0 0 ENSG00000179818.6 ENST00000416506.1 chr2:70275823-70282955 4 538 6588 intergenic 2.10 0 0,0,1 0 0,0,0 0 10.2921979356406 0 22.2137546468401 4.87401335761992 0 22.9014869888476 8.38554948391014 0 0 0 chimp,human,macaque,orangutan, processed_transcript processed_transcript A549@5.50272,AG04450@2.05915,BJ@3.20656,GM12878@20.3751,H1HESC@8.04051,HELAS3@14.4195,HEPG2@12.2062,HMEC@1.38847,HSMM@3.04591,HUVEC@4.69775,K562@6.66481,MCF7@6.0883,NHEK@2.77866,NHLF@2.345,SKNSHRA@5.28404, 0 0 0 0 ENSG00000179818.6 ENST00000439670.2 chr2:70276177-70313617 7 2173 35255 intergenic 1.57 0 0,1,1 1 0,0,0 0 5.32438872184717 153.796 22.7534498620055 8.9988653769785 171.961 24.2506899724011 10.5356838940262 168.995 0 0 chimp,human,macaque,marmoset,orangutan, processed_transcript processed_transcript A549@5.50272,AG04450@2.05915,BJ@3.20656,GM12878@20.3751,H1HESC@8.04051,HELAS3@14.4195,HEPG2@12.2062,HMEC@1.38847,HSMM@3.04591,HUVEC@4.69775,K562@6.66481,MCF7@6.0883,NHEK@2.77866,NHLF@2.345,SKNSHRA@5.28404, 0 0 0 0 ENSG00000179818.6 ENST00000442040.1 chr2:70276912-70313404 4 1107 35379 intergenic 5.07 0 0,1,0 1 0,0,0 0 5.30557675457192 48.472 42.9421860885276 8.84699963255038 92.774 43.7299006323397 10.3749116707651 92.326 0 0 chimp,guinea_pig,human,macaque,marmoset,orangutan, processed_transcript processed_transcript A549@5.50272,AG04450@2.05915,BJ@3.20656,GM12878@20.3751,H1HESC@8.04051,HELAS3@14.4195,HEPG2@12.2062,HMEC@1.38847,HSMM@3.04591,HUVEC@4.69775,K562@6.66481,MCF7@6.0883,NHEK@2.77866,NHLF@2.345,SKNSHRA@5.28404, 0 0 0 0 ENSG00000179818.6 ENST00000437456.1 chr2:70278342-70313405 5 578 34477 intergenic -0.22 0 0,1,0 1 0,0,0 0 3.47770977753285 48.472 73.6124567474048 8.61148011717957 93.037 74.7906574394464 10.0142413783102 92.591 0 0 cat,chimp,human,macaque,marmoset,orangutan,rabbit, processed_transcript processed_transcript A549@5.50272,AG04450@2.05915,BJ@3.20656,GM12878@20.3751,H1HESC@8.04051,HELAS3@14.4195,HEPG2@12.2062,HMEC@1.38847,HSMM@3.04591,HUVEC@4.69775,K562@6.66481,MCF7@6.0883,NHEK@2.77866,NHLF@2.345,SKNSHRA@5.28404, 0 0 0 0 ENSG00000179818.6 ENST00000416068.1 chr2:70278346-70313405 5 550 34501 intergenic -1.77 0 0,1,0 1 0,0,0 0 3.47529057128779 48.472 75.0109090909091 8.60548969595084 93.037 76.1763636363636 10.0072751514449 92.591 0 0 cat,chimp,guinea_pig,human,macaque,marmoset,orangutan,panda, processed_transcript processed_transcript A549@5.50272,AG04450@2.05915,BJ@3.20656,GM12878@20.3751,H1HESC@8.04051,HELAS3@14.4195,HEPG2@12.2062,HMEC@1.38847,HSMM@3.04591,HUVEC@4.69775,K562@6.66481,MCF7@6.0883,NHEK@2.77866,NHLF@2.345,SKNSHRA@5.28404, 0 0 0 0 ENSG00000179818.6 ENST00000444320.1 chr2:70278380-70313404 6 576 34438 intergenic -1.77 0 0,1,0 1 0,0,0 0 3.48164817933678 48.472 57.0451388888889 8.62123235960276 92.774 57.7065972222222 10.025582205703 92.326 0 0 cat,chimp,human,macaque,marmoset,orangutan, processed_transcript processed_transcript A549@5.50272,AG04450@2.05915,BJ@3.20656,GM12878@20.3751,H1HESC@8.04051,HELAS3@14.4195,HEPG2@12.2062,HMEC@1.38847,HSMM@3.04591,HUVEC@4.69775,K562@6.66481,MCF7@6.0883,NHEK@2.77866,NHLF@2.345,SKNSHRA@5.28404, 0 0 0 0 ENSG00000179818.6 ENST00000415060.2 chr2:70278408-70313026 6 501 34107 intergenic 5.07 0 0,0,0 0 0,0,0 0 3.51543671387105 27.679 40.0998003992016 8.70489928753628 51.4 40.8942115768463 10.1228780015833 51.331 1 1 chimp,human,macaque,marmoset,orangutan, processed_transcript processed_transcript A549@5.50272,AG04450@2.05915,BJ@3.20656,GM12878@20.3751,H1HESC@8.04051,HELAS3@14.4195,HEPG2@12.2062,HMEC@1.38847,HSMM@3.04591,HUVEC@4.69775,K562@6.66481,MCF7@6.0883,NHEK@2.77866,NHLF@2.345,SKNSHRA@5.28404, 0 0 0 0 ENSG00000179818.6 ENST00000439892.1 chr2:70282868-70313399 4 574 29951 intergenic -0.82 0 0,1,1 1 0,0,0 1.45644599303136 3.96834830222697 48.472 72.2979094076655 9.11154886314314 92.737 84.4320557491289 10.0097826449868 92.258 0 0 chimp,guinea_pig,human,macaque,marmoset,orangutan,rabbit, processed_transcript processed_transcript A549@5.50272,AG04450@2.05915,BJ@3.20656,GM12878@20.3751,H1HESC@8.04051,HELAS3@14.4195,HEPG2@12.2062,HMEC@1.38847,HSMM@3.04591,HUVEC@4.69775,K562@6.66481,MCF7@6.0883,NHEK@2.77866,NHLF@2.345,SKNSHRA@5.28404, 0 0 0 0 ENSG00000179818.6 ENST00000429599.1 chr2:70310639-70313405 3 714 2048 intergenic 5.07 0 0,1,0 1 0,0,0 1.17086834733894 0 48.472 60.5084033613445 7.88916015625 93.037 70.2240896358543 10.42431640625 92.591 0 0 chimp,cow,elephant,guinea_pig,horse,human,macaque,marmoset,orangutan,pig,rabbit, processed_transcript processed_transcript A549@5.50272,AG04450@2.05915,BJ@3.20656,GM12878@20.3751,H1HESC@8.04051,HELAS3@14.4195,HEPG2@12.2062,HMEC@1.38847,HSMM@3.04591,HUVEC@4.69775,K562@6.66481,MCF7@6.0883,NHEK@2.77866,NHLF@2.345,SKNSHRA@5.28404, 0 0 0 0 ENSG00000179818.6 ENST00000437019.1 chr2:70310712-70313313 2 741 1858 intergenic 5.07 0 0,1,0 1 0,0,0 0 0 48.472 39.5708502024291 8.69590958019376 104.227 48.8987854251012 11.4903121636168 103.752 0 0 cat,chimp,horse,human,macaque,marmoset,orangutan,panda,pig, processed_transcript processed_transcript A549@5.50272,AG04450@2.05915,BJ@3.20656,GM12878@20.3751,H1HESC@8.04051,HELAS3@14.4195,HEPG2@12.2062,HMEC@1.38847,HSMM@3.04591,HUVEC@4.69775,K562@6.66481,MCF7@6.0883,NHEK@2.77866,NHLF@2.345,SKNSHRA@5.28404, 0 0 0 0 ENSG00000233060.1 ENST00000455541.1 chr2:70316853-70323232 3 445 5930 intergenic -1.99 0 0,0,1 0 0,0,0 139.874157303371 12.4637436762226 390.642 118.022471910112 7.44536256323777 449.636 116.775280898876 8.33946037099494 337.762 0 0 cat,chimp,cow,elephant,guinea_pig,horse,human,macaque,marmoset,orangutan,panda,pig, lincRNA lincRNA A549@0.0277155,AG04450@0.0353985,BJ@0.023959,GM12878@0.63539,H1HESC@0.099498,HELAS3@0.091355,HEPG2@0.180424,HMEC@0,HSMM@0.0101765,HUVEC@0.0238425,K562@0.15208,MCF7@0.0319225,NHEK@0.00294033,NHLF@0,SKNSHRA@0.033231, 0 0 0 0 ENSG00000226505.1 ENST00000424748.1 chr2:70321026-70322298 2 791 479 intergenic 2.53 0 0,0,1 0 0,0,0 0 0 73.91 16.3261694058154 9.58246346555324 24.117 19.1352718078382 9.73277661795407 26.982 0 0 cat,chimp,cow,elephant,horse,human,macaque,marmoset,orangutan,panda,pig, lincRNA retained_intron A549@0.011299,AG04450@0.004474,BJ@0,GM12878@0.21402,H1HESC@0,HELAS3@0,HEPG2@0.132013,HMEC@0,HSMM@0.0028745,HUVEC@0,K562@0,MCF7@0.003078,NHEK@0.00321967,NHLF@0.009263,SKNSHRA@0.0045285, 0 0 0 0 ENSG00000226505.1 ENST00000457870.1 chr2:70321029-70322126 3 498 595 intergenic -0.20 0 0,0,1 0 0,0,0 0 0 73.91 17.4819277108434 14.3445378151261 24.117 21.6546184738956 14.6924369747899 26.982 0 0 cat,chimp,cow,elephant,horse,human,macaque,marmoset,orangutan,panda,pig, lincRNA lincRNA A549@0.011299,AG04450@0.004474,BJ@0,GM12878@0.21402,H1HESC@0,HELAS3@0,HEPG2@0.132013,HMEC@0,HSMM@0.0028745,HUVEC@0,K562@0,MCF7@0.003078,NHEK@0.00321967,NHLF@0.009263,SKNSHRA@0.0045285, 0 0 0 0 ENSG00000226505.1 ENST00000442326.1 chr2:70321071-70330352 5 663 8610 intergenic -0.20 0 0,1,1 0 0,0,0 0 8.58420441347271 19.04 11.9411764705882 6.85098722415796 40.951 18.5203619909502 8.66771196283391 42.891 0 0 cat,chimp,elephant,horse,human,macaque,marmoset,orangutan,panda, lincRNA lincRNA A549@0.011299,AG04450@0.004474,BJ@0,GM12878@0.21402,H1HESC@0,HELAS3@0,HEPG2@0.132013,HMEC@0,HSMM@0.0028745,HUVEC@0,K562@0,MCF7@0.003078,NHEK@0.00321967,NHLF@0.009263,SKNSHRA@0.0045285, 0 0 0 0 ENSG00000231327.1 ENST00000414141.1 chr2:70351168-70352449 2 660 619 intergenic 0.19 1 0,1,1 1 0,0,0 13.9030303030303 54.0872374798061 0 0 4.40710823909532 0 0 4.46042003231018 0 0 0 chimp,human,macaque,marmoset,orangutan, lincRNA lincRNA A549@0.381801,AG04450@0.027601,BJ@0.0329965,GM12878@0.183708,H1HESC@0.863997,HELAS3@0.121413,HEPG2@0.090105,HMEC@0.074838,HSMM@0.163715,HUVEC@0.195769,K562@0.029889,MCF7@0.296743,NHEK@0.01157,NHLF@0.261073,SKNSHRA@0.244656, 0 0 0 0 ENSG00000233849.1 ENST00000445084.1 chr2:70528583-70529204 2 285 334 exonic 0 0 0,1,1 1 0,0,0 0 0 23.585 136.743859649123 63.1497005988024 70.507 158.824561403509 65.1796407185629 84.778 0 0 cat,chimp,cow,dog,elephant,horse,human,macaque,marmoset,orangutan,panda,pig, antisense antisense A549@0.07375,AG04450@0,BJ@0.019854,GM12878@0.0162765,H1HESC@0.579903,HELAS3@0.231686,HEPG2@0.053022,HMEC@0.099869,HSMM@0.0079425,HUVEC@0,K562@0.091166,MCF7@0.063741,NHEK@0.0478637,NHLF@0.0203955,SKNSHRA@0.0158245, 0 0 0 0 ENSG00000229229.1 ENST00000452525.1 chr2:70630066-70649810 4 573 19165 intergenic 1.34 0 0,0,1 0 0,0,0 0 11.5518914688234 0 0 13.3012261935821 11.904 0 14.4465431776676 12.432 0 0 chimp,cow,human,macaque,orangutan, antisense antisense A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0.013237,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0.003932, 0 0 0 0 ENSG00000224606.1 ENST00000441238.1 chr2:70694517-70695627 2 434 674 intronic -0.50 0 0,0,0 0 0,0,0 0 0 0 9.33179723502304 0 0 9.60829493087558 0 2.43 0 0 cat,chimp,elephant,horse,human,macaque,marmoset,orangutan,panda, sense_intronic sense_intronic A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0.017867,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0.053265,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000235035.1 ENST00000457851.1 chr2:70914274-70918956 2 432 4248 intronic 0.59 0 0,0,0 0 0,0,0 0 25.4491525423729 0 0 32.459274952919 3.224 0 35.4802259887006 3.367 0 0 chimp,elephant,horse,human,macaque,marmoset,orangutan,panda, antisense antisense A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0.044641, 0 0 0 0 ENSG00000237751.1 ENST00000449073.1 chr2:71115001-71115478 2 371 104 intergenic 0 0 0,1,0 0 0,0,0 0 0 0 0 20.6826923076923 5.536 0 21.7211538461538 5.536 0 0 chimp,guinea_pig,horse,human,macaque,marmoset,orangutan,pig, lincRNA lincRNA A549@0.011639,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0.018334,HUVEC@0,K562@0,MCF7@0.101463,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000239322.1 ENST00000447639.1 chr2:71168947-71175682 2 941 5792 intronic -3.97 0 0,1,0 1 0,0,0 0 13.0854627071823 0 0 23.1957872928177 3.468 0 20.976864640884 3.54 0 0 chimp,horse,human,macaque,marmoset,orangutan, processed_transcript processed_transcript A549@0.219344,AG04450@0.221553,BJ@0.0625775,GM12878@0.0654795,H1HESC@0.0506635,HELAS3@0.17093,HEPG2@0.140768,HMEC@0.027831,HSMM@0.043035,HUVEC@0.407228,K562@0.172822,MCF7@0.0056725,NHEK@0.0206403,NHLF@0.042051,SKNSHRA@0.354966, 0 0 0 0 ENSG00000239322.1 ENST00000422761.1 chr2:71168957-71175740 3 1126 5653 intronic 1.99 0 0,1,0 1 0,0,0 0 13.4072174066867 0 0 23.7661418715726 3.468 0 21.4926587652574 3.54 0 0 chimp,human,macaque,marmoset,orangutan, processed_transcript processed_transcript A549@0.219344,AG04450@0.221553,BJ@0.0625775,GM12878@0.0654795,H1HESC@0.0506635,HELAS3@0.17093,HEPG2@0.140768,HMEC@0.027831,HSMM@0.043035,HUVEC@0.407228,K562@0.172822,MCF7@0.0056725,NHEK@0.0206403,NHLF@0.042051,SKNSHRA@0.354966, 0 0 0 0 ENSG00000228384.2 ENST00000416229.1 chr2:71221640-71229884 2 475 7767 exonic 6.13 0 0,1,0 0 0,0,0 57.6968421052632 2.53199433500708 74.293 89.9368421052632 5.34504956868804 46.928 92.3115789473684 6.87485515643105 55.18 0 0 cat,chimp,guinea_pig,horse,human,macaque,marmoset,orangutan,panda, antisense antisense A549@0,AG04450@0,BJ@0,GM12878@0.009828,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000236469.1 ENST00000434990.1 chr2:71229661-71291873 4 566 61640 intergenic -1.28 0 0,0,1 0 0,0,0 0 2.12602206359507 0 0 2.42061972744971 5.1 5.94876325088339 24.5423588578845 8.702 0 0 cat,chimp,human,macaque,marmoset,orangutan, processed_transcript processed_transcript A549@0,AG04450@0.003932,BJ@0,GM12878@0.007073,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000237779.1 ENST00000434786.1 chr2:71601068-71602662 2 825 767 intronic -2.33 0 0,0,0 0 0,0,0 0 0 0 1.95151515151515 0 0 2.06181818181818 0 0 0 0 chimp,horse,human,macaque,marmoset,orangutan,panda, sense_intronic sense_intronic A549@1.24457,AG04450@1.01155,BJ@0.626248,GM12878@2.23946,H1HESC@1.64819,HELAS3@1.24567,HEPG2@1.39633,HMEC@0.024848,HSMM@0.166,HUVEC@1.51035,K562@1.36679,MCF7@0.389916,NHEK@0.865264,NHLF@0.164973,SKNSHRA@0.837344, 0 0 0 0 ENSG00000246813.1 ENST00000500227.1 chr2:73181268-73193366 2 2277 9819 intronic 0.75 0 1,1,1 0 0,0,0 20.7949055775143 34.9068133211121 152.844 22.8247694334651 47.139016193095 123.485 24.2121212121212 45.1499134331398 123.416 0 1 chimp,human,marmoset,orangutan, lincRNA lincRNA A549@0,AG04450@0.00283,BJ@0.00568,GM12878@0.0122095,H1HESC@0.025376,HELAS3@0,HEPG2@0.0167565,HMEC@0,HSMM@0,HUVEC@0.0061345,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000246432.1 ENST00000500494.1 chr2:73511662-73518113 2 5125 1324 exonic 1.96 1 0,1,0 1 0,0,0 19.7129756097561 6.36404833836858 223.521 29.2870243902439 11.1450151057402 331.879 28.5986341463415 9.93731117824773 312.649 1 1 chimp,human,macaque,marmoset,orangutan, lincRNA lincRNA A549@0.0115495,AG04450@0.0047225,BJ@0.001416,GM12878@0.0906545,H1HESC@0.0621775,HELAS3@0.0566405,HEPG2@0.0524645,HMEC@0.007188,HSMM@0.00347,HUVEC@0,K562@0.0713145,MCF7@0.238149,NHEK@0.0100507,NHLF@0.002258,SKNSHRA@0.0159835, 0 0 0 0 ENSG00000230002.1 ENST00000441587.1 chr2:73684230-73686609 2 1764 613 intronic -2.85 0 0,0,0 0 0,0,0 0 0 0 4.91496598639456 0 3.51 6.47619047619048 0 9.029 0 0 chimp,human,macaque,orangutan, sense_intronic sense_intronic A549@0.421236,AG04450@0.186225,BJ@0.118075,GM12878@0.57502,H1HESC@0.685952,HELAS3@0.37701,HEPG2@0.15383,HMEC@0.025352,HSMM@0.057955,HUVEC@0.054828,K562@1.3743,MCF7@0.163354,NHEK@0.0428217,NHLF@0.0961925,SKNSHRA@0.246542, 0 0 0 0 ENSG00000237883.1 ENST00000453103.1 chr2:74174769-74208568 2 599 33198 intronic 0 0 0,1,0 1 0,0,0 0 9.57325742514609 0 9.24874791318865 10.4537321525393 4.78 9.03338898163606 11.2966142538707 4.964 0 0 chimp,dog,elephant,horse,human,marmoset,orangutan,rabbit, antisense antisense A549@2.31459,AG04450@0.182556,BJ@0.030312,GM12878@1.33947,H1HESC@0.422963,HELAS3@0.57982,HEPG2@0.030733,HMEC@1.02535,HSMM@0.0727405,HUVEC@0,K562@2.27613,MCF7@1.63536,NHEK@0.834277,NHLF@0.300264,SKNSHRA@0.260893, 0 0 0 0 ENSG00000237883.1 ENST00000439192.1 chr2:74185097-74208560 2 561 22900 exonic 0 0 1,1,1 1 0,0,0 59.1194295900178 5.11113537117904 0 33.9001782531194 6.74200873362445 4.78 40.5811051693405 7.63152838427948 4.964 0 0 chimp,cow,dog,elephant,horse,human,macaque,marmoset,orangutan,panda,rabbit, antisense antisense A549@2.31459,AG04450@0.182556,BJ@0.030312,GM12878@1.33947,H1HESC@0.422963,HELAS3@0.57982,HEPG2@0.030733,HMEC@1.02535,HSMM@0.0727405,HUVEC@0,K562@2.27613,MCF7@1.63536,NHEK@0.834277,NHLF@0.300264,SKNSHRA@0.260893, 0 0 0 0 ENSG00000237883.1 ENST00000413452.1 chr2:74185143-74208488 2 417 22926 exonic 0 0 1,1,1 1 0,0,0 79.5347721822542 5.105338916514 0 39.4916067146283 6.73436273226904 7.33 48.2398081534772 7.62287359330018 7.614 0 0 chimp,cow,dog,elephant,guinea_pig,horse,human,macaque,marmoset,opossum,orangutan,panda, antisense antisense A549@2.31459,AG04450@0.182556,BJ@0.030312,GM12878@1.33947,H1HESC@0.422963,HELAS3@0.57982,HEPG2@0.030733,HMEC@1.02535,HSMM@0.0727405,HUVEC@0,K562@2.27613,MCF7@1.63536,NHEK@0.834277,NHLF@0.300264,SKNSHRA@0.260893, 0 0 0 0 ENSG00000235499.1 ENST00000441217.1 chr2:74212259-74213470 2 388 821 intergenic -6.78 0 0,1,1 0 0,0,0 350.157216494845 62.068209500609 85.233 216.244845360825 209.308160779537 279.782 163.252577319588 156.236297198538 247.129 0 0 cat,chimp,cow,dog,elephant,guinea_pig,horse,human,macaque,marmoset,mouse,opossum,orangutan,panda,pig,rat, lincRNA lincRNA A549@2.50701,AG04450@0.743939,BJ@0.613492,GM12878@4.72847,H1HESC@2.02614,HELAS3@3.41016,HEPG2@4.73079,HMEC@2.96685,HSMM@2.08842,HUVEC@1.86028,K562@1.14324,MCF7@7.61261,NHEK@2.42058,NHLF@1.87332,SKNSHRA@2.60918, 0 0 0 0 ENSG00000255989.1 ENST00000496886.1 chr2:74213653-74220867 2 708 6504 intergenic 1.08 1 0,1,1 0 0,0,0 137.033898305085 6.76860393603936 285.364 158.389830508475 17.1988007380074 206.502 148.642655367232 18.1074723247232 155.02 0 0 cat,chimp,cow,guinea_pig,horse,human,macaque,marmoset,orangutan,panda,pig, lincRNA lincRNA A549@0.490175,AG04450@0.122571,BJ@0.108554,GM12878@1.21196,H1HESC@0.175938,HELAS3@0.576712,HEPG2@0.626129,HMEC@0.011534,HSMM@0.175049,HUVEC@0.597201,K562@0.291123,MCF7@1.72173,NHEK@0.129798,NHLF@0.0108705,SKNSHRA@0.456267, 0 0 0 0 ENSG00000225439.2 ENST00000529783.1 chr2:74375136-74376181 2 629 414 intergenic -2.41 1 1,1,1 1 0,0,0 0 0 0 0 0 46.208 0 0 45.334 0 0 chimp,horse,human,macaque,marmoset,orangutan,panda, antisense antisense A549@0.741709,AG04450@1.04186,BJ@0.926911,GM12878@0.123049,H1HESC@3.30175,HELAS3@0.974019,HEPG2@2.98886,HMEC@1.51342,HSMM@0.682595,HUVEC@0.915019,K562@4.44659,MCF7@0.103552,NHEK@0.345176,NHLF@1.27243,SKNSHRA@2.65976, 0 0 0 0 ENSG00000225439.2 ENST00000423477.2 chr2:74375166-74377188 2 1802 218 intergenic -2.41 0 1,1,1 1 0,0,0 0 0 0 0 0 46.208 1.61820199778024 0 45.334 0 1 human,macaque,marmoset,orangutan, antisense antisense A549@0.741709,AG04450@1.04186,BJ@0.926911,GM12878@0.123049,H1HESC@3.30175,HELAS3@0.974019,HEPG2@2.98886,HMEC@1.51342,HSMM@0.682595,HUVEC@0.915019,K562@4.44659,MCF7@0.103552,NHEK@0.345176,NHLF@1.27243,SKNSHRA@2.65976, 0 0 0 0 ENSG00000225439.2 ENST00000533563.1 chr2:74375172-74377115 3 1596 343 intergenic -5.29 0 1,1,1 1 0,0,0 0 0 0 0 0 46.208 1.82706766917293 0 45.334 0 1 human,macaque,marmoset,orangutan, antisense antisense A549@0.741709,AG04450@1.04186,BJ@0.926911,GM12878@0.123049,H1HESC@3.30175,HELAS3@0.974019,HEPG2@2.98886,HMEC@1.51342,HSMM@0.682595,HUVEC@0.915019,K562@4.44659,MCF7@0.103552,NHEK@0.345176,NHLF@1.27243,SKNSHRA@2.65976, 0 0 0 0 ENSG00000237737.1 ENST00000416630.1 chr2:74612613-74614153 3 581 955 intronic -1.27 0 0,0,0 0 0,0,0 293.913941480207 72.9947643979058 38.016 307.621342512909 22.3151832460733 51.773 295.807228915663 26.5078534031414 50.288 0 0 chimp,cow,dog,elephant,horse,human,macaque,marmoset,orangutan,panda,pig,rabbit, lincRNA processed_transcript A549@0.0032775,AG04450@0.0017605,BJ@0,GM12878@0.004172,H1HESC@0.008809,HELAS3@0.00355,HEPG2@0.019761,HMEC@0.003217,HSMM@0,HUVEC@0,K562@0.006466,MCF7@0.0063175,NHEK@0.000595,NHLF@0.010568,SKNSHRA@0.0126775, 0 0 0 0 ENSG00000237737.1 ENST00000418990.1 chr2:74612623-74618554 2 522 5407 exonic 10.63 0 0,0,1 0 0,0,0 280.275862068966 18.845940447568 43.776 329.421455938697 6.6391714444239 58.543 316.770114942529 8.14370260773072 56.798 0 0 chimp,cow,guinea_pig,horse,human,macaque,marmoset,orangutan,panda,pig, lincRNA retained_intron A549@0.0032775,AG04450@0.0017605,BJ@0,GM12878@0.004172,H1HESC@0.008809,HELAS3@0.00355,HEPG2@0.019761,HMEC@0.003217,HSMM@0,HUVEC@0,K562@0.006466,MCF7@0.0063175,NHEK@0.000595,NHLF@0.010568,SKNSHRA@0.0126775, 0 0 0 0 ENSG00000237737.1 ENST00000426715.1 chr2:74612624-74619031 3 763 5640 exonic 10.63 0 0,0,1 0 0,0,0 196.471821756225 19.4716312056738 44.352 265.714285714286 6.36489361702128 59.22 266.733944954128 7.8072695035461 57.449 0 0 chimp,horse,human,macaque,marmoset,orangutan,panda,pig,rabbit,rat, lincRNA processed_transcript A549@0.0032775,AG04450@0.0017605,BJ@0,GM12878@0.004172,H1HESC@0.008809,HELAS3@0.00355,HEPG2@0.019761,HMEC@0.003217,HSMM@0,HUVEC@0,K562@0.006466,MCF7@0.0063175,NHEK@0.000595,NHLF@0.010568,SKNSHRA@0.0126775, 0 0 0 0 ENSG00000237737.1 ENST00000427343.1 chr2:74612630-74619360 3 575 6151 exonic 10.63 0 0,0,0 0 0,0,0 259.673043478261 18.5693383189725 47.808 311.930434782609 11.3895301576979 63.282 300.589565217391 13.8245813688831 61.355 0 0 chimp,cow,guinea_pig,horse,human,macaque,marmoset,mouse,orangutan,panda,pig,rabbit,rat, lincRNA processed_transcript A549@0.0032775,AG04450@0.0017605,BJ@0,GM12878@0.004172,H1HESC@0.008809,HELAS3@0.00355,HEPG2@0.019761,HMEC@0.003217,HSMM@0,HUVEC@0,K562@0.006466,MCF7@0.0063175,NHEK@0.000595,NHLF@0.010568,SKNSHRA@0.0126775, 0 0 0 0 ENSG00000237737.1 ENST00000412957.1 chr2:74612651-74620023 3 1270 6098 exonic 0.47 0 0,0,1 0 0,0,0 111.335433070866 18.0091833387996 59.904 130.033858267717 11.4885208265005 77.499 125.329133858268 13.9447359790095 75.026 0 0 chimp,human,macaque,marmoset,orangutan, lincRNA processed_transcript A549@0.0032775,AG04450@0.0017605,BJ@0,GM12878@0.004172,H1HESC@0.008809,HELAS3@0.00355,HEPG2@0.019761,HMEC@0.003217,HSMM@0,HUVEC@0,K562@0.006466,MCF7@0.0063175,NHEK@0.000595,NHLF@0.010568,SKNSHRA@0.0126775, 0 0 0 0 ENSG00000237737.1 ENST00000437991.1 chr2:74612845-74621009 4 2141 6017 exonic 5.80 0 0,1,0 0 0,0,0 13.8496029892574 18.2516204088416 171.648 25.4035497431107 11.6431776632874 208.837 25.5604857543204 14.1324580355659 201.32 0 0 chimp,human,macaque,orangutan, lincRNA processed_transcript A549@0.0032775,AG04450@0.0017605,BJ@0,GM12878@0.004172,H1HESC@0.008809,HELAS3@0.00355,HEPG2@0.019761,HMEC@0.003217,HSMM@0,HUVEC@0,K562@0.006466,MCF7@0.0063175,NHEK@0.000595,NHLF@0.010568,SKNSHRA@0.0126775, 0 0 0 0 ENSG00000204792.2 ENST00000435984.1 chr2:75145275-75159921 3 562 14080 intergenic 1.40 0 0,1,0 0 0,0,0 0 1.09204545454545 0 0 5.07045454545455 0 0 6.12329545454546 0 0 0 human,macaque, lincRNA lincRNA A549@0.0008475,AG04450@0.159951,BJ@0.092107,GM12878@0,H1HESC@0.005611,HELAS3@0.172254,HEPG2@0.694821,HMEC@0.157411,HSMM@0,HUVEC@0,K562@0,MCF7@1.79392,NHEK@0.00824,NHLF@0.3051,SKNSHRA@0.0006195, 0 0 0 0 ENSG00000236209.1 ENST00000418001.1 chr2:75146682-75151973 2 761 4528 intergenic 0 0 0,0,0 0 0,0,0 0 0 0 9.7503285151117 0 0 9.61892247043364 0 0 0 0 chimp,human,macaque,orangutan, lincRNA lincRNA A549@0,AG04450@0,BJ@0.329423,GM12878@0.101625,H1HESC@0.0076285,HELAS3@0.623849,HEPG2@1.25255,HMEC@0.075131,HSMM@0.0388105,HUVEC@0.035749,K562@0.029264,MCF7@0.0053895,NHEK@0,NHLF@0.0457755,SKNSHRA@0.102324, 0 0 0 0 ENSG00000204792.2 ENST00000377469.1 chr2:75155366-75160151 2 3660 1123 intergenic 1.85 0 0,1,1 0 0,0,0 0 0 15.376 2.78688524590164 7.78183437221728 45.033 4.53114754098361 8.30276046304541 52.988 0 0 cow,human,marmoset,panda, lincRNA lincRNA A549@0.0008475,AG04450@0.159951,BJ@0.092107,GM12878@0,H1HESC@0.005611,HELAS3@0.172254,HEPG2@0.694821,HMEC@0.157411,HSMM@0,HUVEC@0,K562@0,MCF7@1.79392,NHEK@0.00824,NHLF@0.3051,SKNSHRA@0.0006195, 0 0 0 0 ENSG00000204792.2 ENST00000418204.1 chr2:75158555-75165545 4 437 6547 intergenic 1.13 0 0,1,1 0 0,0,0 0 1.21307469069803 0 0 3.49030090117611 6.63 0 5.98365663662746 6.89 0 0 chimp,human,macaque,orangutan, lincRNA lincRNA A549@0.0008475,AG04450@0.159951,BJ@0.092107,GM12878@0,H1HESC@0.005611,HELAS3@0.172254,HEPG2@0.694821,HMEC@0.157411,HSMM@0,HUVEC@0,K562@0,MCF7@1.79392,NHEK@0.00824,NHLF@0.3051,SKNSHRA@0.0006195, 0 0 0 0 ENSG00000230836.1 ENST00000453951.1 chr2:75167385-75169797 2 1264 1146 intergenic -3.34 0 0,0,1 0 0,0,0 0 0 0 0 3.44240837696335 3.06 0 5.09424083769634 3.18 0 0 chimp,human,orangutan, lincRNA lincRNA A549@0,AG04450@0.329379,BJ@0.259094,GM12878@0.014812,H1HESC@0.0016385,HELAS3@0.220904,HEPG2@1.98202,HMEC@0.523957,HSMM@0.0068515,HUVEC@0,K562@0,MCF7@6.23503,NHEK@0.0784047,NHLF@0.409298,SKNSHRA@0, 0 0 0 0 ENSG00000237293.1 ENST00000444852.1 chr2:75701579-75709705 2 334 7790 intergenic -0.71 0 0,1,0 0 0,0,0 0 9.77240051347882 0 0 15.9740693196406 0 0 17.6884467265725 0 0 0 chimp,dog,guinea_pig,horse,human,macaque,orangutan, antisense antisense A549@0,AG04450@0,BJ@0.0073275,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000231172.1 ENST00000451622.1 chr2:75767865-75769832 2 1099 866 intronic 5.93 0 0,0,1 0 0,0,0 0 0 40.8 2.10373066424022 0 78.645 2.14740673339399 0 99.385 0 0 chimp,human,macaque,marmoset,orangutan, lincRNA processed_transcript A549@0.35507,AG04450@0.0175725,BJ@0.004396,GM12878@0,H1HESC@0,HELAS3@0.44736,HEPG2@4.49974,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0.0949955, 0 0 0 0 ENSG00000234653.1 ENST00000445178.1 chr2:77213091-77236917 4 996 22824 intronic -2.41 1 0,0,0 0 0,0,0 98.8353413654618 12.83600595864 31.892 88.7941767068273 15.2423764458465 53.842 75.5411646586345 15.0987556957588 57.009 0 0 cat,chimp,cow,dog,elephant,guinea_pig,horse,human,macaque,marmoset,mouse,opossum,orangutan,panda,pig,rabbit,rat, antisense antisense A549@0,AG04450@0,BJ@0,GM12878@0.057348,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0.0224485,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000227088.1 ENST00000437233.1 chr2:77879539-77881794 2 282 1971 intergenic -3.29 0 0,0,1 0 0,0,0 0 0 9.9 0 0 55.35 0 0 56.766 0 0 chimp,horse,human,orangutan, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0.0949285,HELAS3@0.382136,HEPG2@0.721078,HMEC@0,HSMM@0,HUVEC@0,K562@0.0188545,MCF7@0.021719,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000230968.1 ENST00000438443.1 chr2:77899341-77900918 2 795 780 intergenic -3.82 0 0,0,0 0 0,0,0 0 0 0 0 15.5102564102564 0 0 17.0435897435897 0 0 0 cat,chimp,dog,elephant,guinea_pig,horse,human,macaque,marmoset,mouse,orangutan,panda,pig,rabbit, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0.026469,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000233605.1 ENST00000443419.1 chr2:78143060-78145135 3 632 1439 intergenic -0.33 1 0,0,0 0 0,0,0 133.087025316456 42.5941626129256 73.531 135.439873417722 66.9694232105629 57.028 131.977848101266 71.9833217512161 52.519 0 0 chimp,dog,elephant,guinea_pig,horse,human,macaque,marmoset,mouse,orangutan,panda,pig,rabbit,rat, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000229494.1 ENST00000439259.1 chr2:78315856-78354932 6 1097 37969 intergenic 5.09 1 0,0,0 0 0,0,0 0 1.91624746503727 0 0 3.70175669625221 0 0 4.4373567910664 0 0 0 chimp,human,macaque, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0.011353,HEPG2@0.0026565,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000234877.2 ENST00000420648.2 chr2:78825037-78826532 2 369 1124 intergenic -6.49 0 0,1,0 0 0,0,0 169.756097560976 0 0 164.669376693767 0 0 176.661246612466 47.7348754448399 0 0 0 cat,chimp,cow,dog,elephant,horse,human,macaque,marmoset,mouse,orangutan,panda,rabbit,rat, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000229385.1 ENST00000443301.1 chr2:79720842-79727970 5 664 6456 intronic 0.83 0 0,0,0 0 0,0,0 0 0 0 0 0.513011152416357 2.805 0 0.516728624535316 2.992 0 0 chimp,elephant,horse,human,macaque,marmoset,orangutan,pig, antisense antisense A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0.0124035,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0.013589, 0 0 0 0 ENSG00000224731.1 ENST00000418621.1 chr2:80255138-80257677 3 483 2052 intronic -11.88 0 0,0,0 0 0,0,0 22.2670807453416 6.40594541910331 0 48.296066252588 14.3567251461988 0 48.1532091097309 14.6827485380117 0 0 0 cat,chimp,dog,elephant,horse,human,macaque,marmoset,orangutan,panda,pig, antisense antisense A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0.0616713,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000237031.1 ENST00000430876.1 chr2:80802238-80843663 3 356 41065 intronic 0.51 1 0,0,0 0 0,0,0 0 44.5931328381834 28.996 0 51.1014976257153 42.553 0 49.8685742116157 50.526 0 0 chimp,dog,elephant,horse,human,macaque,marmoset,orangutan, antisense antisense A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000230975.1 ENST00000450290.1 chr2:80926513-81097315 5 764 170030 intergenic -0.87 0 0,0,0 0 0,0,0 7.93455497382199 6.678862553667 16.8 35.8023560209424 7.88467917426337 1.434 36.1688481675393 8.4361994942069 1.295 0 0 cat,chimp,cow,dog,elephant,horse,human,macaque,marmoset,mouse,orangutan,panda,rabbit, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0.0050185,SKNSHRA@0, 0 0 0 0 ENSG00000235519.1 ENST00000446580.1 chr2:81689819-81694070 2 518 3731 intergenic -4.12 0 0,0,0 0 0,0,0 54.1003861003861 2.65880461002412 0 35.0559845559846 0 0 35.7625482625483 0 0 0 0 cat,chimp,cow,dog,elephant,guinea_pig,horse,human,macaque,marmoset,mouse,orangutan,panda,pig,rabbit,rat, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000231781.1 ENST00000455845.1 chr2:82210396-82232824 5 483 21937 intergenic 3.66 0 0,0,0 0 0,0,0 0 0 43.665 0 1.3044171946939 37.389 0 1.28846241509778 49.393 0 0 chimp,human,macaque,orangutan, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0.105938,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000237498.2 ENST00000437290.2 chr2:82706252-82765835 3 382 59197 intergenic -5.53 0 0,0,0 0 0,0,0 0 1.06145581701775 13.872 0 1.35476459955741 39.832 0 2.05115124077234 49.203 0 0 chimp,dog,human,macaque,marmoset,orangutan,panda, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000232548.1 ENST00000448431.1 chr2:83749938-83750626 2 301 385 intergenic 0.21 0 0,0,0 0 0,0,0 0 0 0 0 0 0 0 0 0 0 0 chimp,human,macaque,marmoset,orangutan, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0.017672,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000228272.1 ENST00000440495.1 chr2:84542232-84577898 3 643 35019 intergenic -0.34 0 0,0,0 0 0,0,0 0 4.94817099288957 0 0 12.1003455267141 12.728 0 12.4506981924098 12.518 0 0 cat,chimp,cow,dog,guinea_pig,horse,human,macaque,marmoset,orangutan,panda,pig,rabbit, processed_transcript processed_transcript A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000231134.1 ENST00000433581.1 chr2:85413532-85414376 2 456 386 intronic -6.84 0 0,0,0 0 0,0,0 0 0 0 0 0 0 0 0 0 0 0 cat,chimp,cow,elephant,guinea_pig,horse,human,macaque,marmoset,orangutan,rabbit, sense_intronic sense_intronic A549@0.0050295,AG04450@0.046319,BJ@0.014983,GM12878@0,H1HESC@0.0904335,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0.025846,K562@0,MCF7@0,NHEK@0.00661433,NHLF@0,SKNSHRA@0.0399805, 0 0 0 0 ENSG00000250117.1 ENST00000502432.1 chr2:85514761-85519567 2 4468 336 intronic -2.61 0 0,0,0 0 0,0,0 26.218442256043 0 0 14.3328111011638 0 0 15.7714861235452 0 0 0 1 chimp,human,macaque,orangutan, lincRNA lincRNA A549@0.022798,AG04450@0.0664365,BJ@0.0529225,GM12878@0.000451,H1HESC@0.398175,HELAS3@0.0011335,HEPG2@0.0005125,HMEC@0.075493,HSMM@0.0541775,HUVEC@0.121919,K562@0,MCF7@0.0816595,NHEK@0.039658,NHLF@0.0270205,SKNSHRA@0.0434835, 0 0 0 0 ENSG00000229498.1 ENST00000366278.2 chr2:86042253-86052514 3 1708 8549 intergenic -1.21 0 0,0,0 0 0,0,0 0 2.75587788045385 0 3.47072599531616 5.73365305883729 3.949 3.62529274004684 6.23745467306118 3.905 0 0 chimp,human,marmoset,orangutan, antisense antisense A549@0.022623,AG04450@0.0108935,BJ@0.053072,GM12878@0.006837,H1HESC@0.020411,HELAS3@0.082585,HEPG2@0.039158,HMEC@0,HSMM@0.471348,HUVEC@0.070855,K562@0,MCF7@0.0035515,NHEK@0,NHLF@0.189342,SKNSHRA@0.0359325, 0 0 0 0 ENSG00000232504.3 ENST00000455121.3 chr2:86116403-86118103 2 781 917 intergenic 3.10 0 0,1,1 1 0,0,0 0 0 11.16 0 11.1275899672846 65.83 0 11.2082878953108 65.499 0 0 cat,chimp,dog,elephant,horse,human,macaque,marmoset,orangutan,panda,pig,rabbit, lincRNA processed_transcript A549@0.595198,AG04450@0.027098,BJ@0.0259285,GM12878@0.357395,H1HESC@0.0037955,HELAS3@0.036465,HEPG2@0.0200075,HMEC@0.015688,HSMM@0.0482605,HUVEC@0.01137,K562@0.030723,MCF7@0.116349,NHEK@0.0875107,NHLF@0.002492,SKNSHRA@0.044429, 0 0 0 0 ENSG00000232504.3 ENST00000524693.1 chr2:86118038-86118990 2 466 484 intergenic 0 0 0,0,0 0 0,0,0 0 0 0 0 0 0 0 0 0 0 0 chimp,elephant,human,macaque,orangutan,panda, lincRNA processed_transcript A549@0.595198,AG04450@0.027098,BJ@0.0259285,GM12878@0.357395,H1HESC@0.0037955,HELAS3@0.036465,HEPG2@0.0200075,HMEC@0.015688,HSMM@0.0482605,HUVEC@0.01137,K562@0.030723,MCF7@0.116349,NHEK@0.0875107,NHLF@0.002492,SKNSHRA@0.044429, 0 0 0 0 ENSG00000228363.1 ENST00000439077.1 chr2:86789198-86844564 3 511 54851 intronic 1.80 0 0,1,0 0 0,0,0 0 27.9387249092997 0 0 34.0494794990064 0 0 29.3611237716723 0 0 0 chimp,horse,human,macaque,marmoset,orangutan, antisense antisense A549@0.008214,AG04450@0.0046815,BJ@0.004991,GM12878@0.0020435,H1HESC@0,HELAS3@0.008313,HEPG2@0.0111855,HMEC@0,HSMM@0.02151,HUVEC@0,K562@0.001192,MCF7@0,NHEK@0.00689467,NHLF@0,SKNSHRA@0.0167545, 0 0 0 0 ENSG00000228363.1 ENST00000426549.1 chr2:86831130-86845889 2 1946 12811 exonic 1.80 1 0,0,0 0 0,0,0 67.3206577595067 65.0722035750527 427.038 71.2178828365879 78.5776286004215 453.327 107.798561151079 62.5019904769339 390.002 0 0 chimp,human,macaque,marmoset,orangutan, antisense antisense A549@0.008214,AG04450@0.0046815,BJ@0.004991,GM12878@0.0020435,H1HESC@0,HELAS3@0.008313,HEPG2@0.0111855,HMEC@0,HSMM@0.02151,HUVEC@0,K562@0.001192,MCF7@0,NHEK@0.00689467,NHLF@0,SKNSHRA@0.0167545, 0 0 0 0 ENSG00000228363.1 ENST00000424788.1 chr2:86831413-86845178 3 1144 12617 exonic 2.48 0 0,0,0 0 0,0,0 158.54020979021 56.7474042957914 482.873 163.54020979021 67.8559086946184 554.865 137.994755244755 53.10184671475 441.507 0 0 chimp,guinea_pig,human,macaque,marmoset,opossum,orangutan,rabbit, antisense antisense A549@0.008214,AG04450@0.0046815,BJ@0.004991,GM12878@0.0020435,H1HESC@0,HELAS3@0.008313,HEPG2@0.0111855,HMEC@0,HSMM@0.02151,HUVEC@0,K562@0.001192,MCF7@0,NHEK@0.00689467,NHLF@0,SKNSHRA@0.0167545, 0 0 0 0 ENSG00000250262.1 ENST00000502627.1 chr2:87749037-87758508 2 1954 7515 intergenic 1.50 0 0,0,0 0 0,0,0 0 33.2910179640719 0 0 27.3430472388556 0 0 25.8161011310712 0 0 0 chimp,dog,human,macaque,marmoset,orangutan,panda, lincRNA lincRNA A549@0.0387895,AG04450@0.0332545,BJ@0.0291365,GM12878@0.0127625,H1HESC@0.0126445,HELAS3@0.0266365,HEPG2@0.0222745,HMEC@0.014422,HSMM@0.0367405,HUVEC@0.069149,K562@0.0555905,MCF7@0.020586,NHEK@0.025162,NHLF@0.0390335,SKNSHRA@0.0197605, 0 0 0 0 ENSG00000222041.5 ENST00000409054.1 chr2:87754887-87883594 2 1094 127611 intergenic 1.40 0 0,0,0 0 0,0,0 52.9387568555759 12.9583499855028 98.28 61.0941499085923 17.1029691797729 34.248 64.1032906764168 28.5256051594298 29.893 0 0 cat,chimp,cow,dog,elephant,guinea_pig,horse,human,macaque,marmoset,mouse,orangutan,panda,pig,rabbit,rat, lincRNA processed_transcript A549@24.7216,AG04450@46.4132,BJ@47.9827,GM12878@5.76771,H1HESC@4.46256,HELAS3@18.5499,HEPG2@17.9562,HMEC@17.3202,HSMM@36.2717,HUVEC@72.026,K562@46.7065,MCF7@6.06588,NHEK@24.2586,NHLF@27.8649,SKNSHRA@6.5872, 0 0 0 0 ENSG00000222041.5 ENST00000331944.6 chr2:87754948-87821037 2 527 65560 intergenic 7.90 1 0,1,1 0 0,0,0 69.2675521821632 21.6227577791336 119.691 179.056925996205 19.1914582062233 68.042 174.967741935484 20.7732458816351 63.504 0 0 cat,chimp,cow,dog,elephant,guinea_pig,horse,human,macaque,marmoset,mouse,orangutan,panda,pig,rabbit,rat, lincRNA processed_transcript A549@24.7216,AG04450@46.4132,BJ@47.9827,GM12878@5.76771,H1HESC@4.46256,HELAS3@18.5499,HEPG2@17.9562,HMEC@17.3202,HSMM@36.2717,HUVEC@72.026,K562@46.7065,MCF7@6.06588,NHEK@24.2586,NHLF@27.8649,SKNSHRA@6.5872, 0 0 0 0 ENSG00000222041.5 ENST00000409139.1 chr2:87754948-87906324 3 516 150856 intergenic 0.65 0 0,1,0 0 0,0,0 70.7441860465116 11.2519223630482 119.691 68.3624031007752 15.5206156864825 68.042 75.2887596899225 25.9739022644111 63.504 0 0 cat,chimp,cow,dog,elephant,horse,human,macaque,marmoset,orangutan,pig,rabbit,rat, lincRNA processed_transcript A549@24.7216,AG04450@46.4132,BJ@47.9827,GM12878@5.76771,H1HESC@4.46256,HELAS3@18.5499,HEPG2@17.9562,HMEC@17.3202,HSMM@36.2717,HUVEC@72.026,K562@46.7065,MCF7@6.06588,NHEK@24.2586,NHLF@27.8649,SKNSHRA@6.5872, 0 0 0 0 ENSG00000222041.5 ENST00000409898.2 chr2:87754995-87906258 4 556 150701 intergenic 0.65 0 0,1,0 0 0,0,0 35.91921005386 11.2635700066357 136.188 28.4901256732496 15.5366821499668 85.77 30.0125673249551 26.0007896483079 83.856 0 0 chimp,dog,human,macaque,marmoset,mouse,rabbit, lincRNA processed_transcript A549@24.7216,AG04450@46.4132,BJ@47.9827,GM12878@5.76771,H1HESC@4.46256,HELAS3@18.5499,HEPG2@17.9562,HMEC@17.3202,HSMM@36.2717,HUVEC@72.026,K562@46.7065,MCF7@6.06588,NHEK@24.2586,NHLF@27.8649,SKNSHRA@6.5872, 127 2 89 2 ENSG00000222041.5 ENST00000419680.2 chr2:87754998-87820932 4 671 65257 intergenic -0.06 1 0,1,0 0 0,0,0 28.24739195231 21.7231561365064 137.241 109.664679582712 19.2805676019431 86.084 95.5409836065574 20.8696998023201 84.199 0 0 cat,chimp,cow,dog,horse,human,macaque,marmoset,orangutan, lincRNA processed_transcript A549@24.7216,AG04450@46.4132,BJ@47.9827,GM12878@5.76771,H1HESC@4.46256,HELAS3@18.5499,HEPG2@17.9562,HMEC@17.3202,HSMM@36.2717,HUVEC@72.026,K562@46.7065,MCF7@6.06588,NHEK@24.2586,NHLF@27.8649,SKNSHRA@6.5872, 0 0 0 0 ENSG00000222041.5 ENST00000414584.1 chr2:87755015-87821037 4 768 65248 intergenic 7.90 1 1,1,1 0 0,0,0 16.91015625 21.7261525257479 143.208 92.73828125 19.2832270720942 91.422 85.7942708333333 20.8725784698382 90.03 0 0 chimp,human,macaque,marmoset,orangutan,rabbit,rat, lincRNA processed_transcript A549@24.7216,AG04450@46.4132,BJ@47.9827,GM12878@5.76771,H1HESC@4.46256,HELAS3@18.5499,HEPG2@17.9562,HMEC@17.3202,HSMM@36.2717,HUVEC@72.026,K562@46.7065,MCF7@6.06588,NHEK@24.2586,NHLF@27.8649,SKNSHRA@6.5872, 116 2 69 2 ENSG00000222041.5 ENST00000455131.1 chr2:87755024-87820932 3 730 65174 intergenic 0.65 1 0,1,0 0 0,0,0 13.4630136986301 21.7508208794918 146.367 89.6178082191781 19.3051216742873 94.248 75.6027397260274 20.8962776567343 93.117 0 0 cat,chimp,guinea_pig,human,macaque,marmoset,pig,rabbit, lincRNA processed_transcript A549@24.7216,AG04450@46.4132,BJ@47.9827,GM12878@5.76771,H1HESC@4.46256,HELAS3@18.5499,HEPG2@17.9562,HMEC@17.3202,HSMM@36.2717,HUVEC@72.026,K562@46.7065,MCF7@6.06588,NHEK@24.2586,NHLF@27.8649,SKNSHRA@6.5872, 0 0 74 2 ENSG00000222041.5 ENST00000423846.1 chr2:87755061-87820932 3 454 65413 intergenic -0.06 1 0,1,0 0 0,0,0 0 21.6713497317047 156.546 137.874449339207 19.2345863971993 97.388 114.764317180617 20.8199287603382 96.547 0 0 chimp,cow,dog,guinea_pig,horse,human,macaque,marmoset,orangutan,panda,pig,rat, lincRNA processed_transcript A549@24.7216,AG04450@46.4132,BJ@47.9827,GM12878@5.76771,H1HESC@4.46256,HELAS3@18.5499,HEPG2@17.9562,HMEC@17.3202,HSMM@36.2717,HUVEC@72.026,K562@46.7065,MCF7@6.06588,NHEK@24.2586,NHLF@27.8649,SKNSHRA@6.5872, 0 0 0 0 ENSG00000222041.5 ENST00000414030.1 chr2:87769469-87780211 3 715 10023 intergenic -0.26 0 1,1,1 0 0,0,0 0 18.3188666068043 0 0 6.57018856629752 0 0 10.6618776813329 0 0 0 chimp,horse,human,macaque,marmoset, lincRNA processed_transcript A549@24.7216,AG04450@46.4132,BJ@47.9827,GM12878@5.76771,H1HESC@4.46256,HELAS3@18.5499,HEPG2@17.9562,HMEC@17.3202,HSMM@36.2717,HUVEC@72.026,K562@46.7065,MCF7@6.06588,NHEK@24.2586,NHLF@27.8649,SKNSHRA@6.5872, 0 0 73 2 ENSG00000222041.5 ENST00000437561.1 chr2:87769469-87820932 3 452 51007 intergenic -1.99 1 0,1,0 0 0,0,0 0 25.2804517027075 0 129.079646017699 22.3098006156018 0 106.365044247788 24.4487619346364 0 0 0 cat,chimp,horse,human,macaque,marmoset,mouse,orangutan,pig,rat, lincRNA processed_transcript A549@24.7216,AG04450@46.4132,BJ@47.9827,GM12878@5.76771,H1HESC@4.46256,HELAS3@18.5499,HEPG2@17.9562,HMEC@17.3202,HSMM@36.2717,HUVEC@72.026,K562@46.7065,MCF7@6.06588,NHEK@24.2586,NHLF@27.8649,SKNSHRA@6.5872, 0 0 0 0 ENSG00000222041.5 ENST00000413202.1 chr2:87808733-87821033 2 420 11878 intergenic 7.90 1 0,0,1 0 0,0,0 0 67.104226300724 0 146 68.4853510692036 0 132.595238095238 72.5905034517596 0 0 0 chimp,cow,dog,elephant,guinea_pig,horse,human,macaque,marmoset,mouse,opossum,orangutan,panda,pig,rabbit,rat, lincRNA processed_transcript A549@24.7216,AG04450@46.4132,BJ@47.9827,GM12878@5.76771,H1HESC@4.46256,HELAS3@18.5499,HEPG2@17.9562,HMEC@17.3202,HSMM@36.2717,HUVEC@72.026,K562@46.7065,MCF7@6.06588,NHEK@24.2586,NHLF@27.8649,SKNSHRA@6.5872, 0 0 0 0 ENSG00000225420.1 ENST00000413234.1 chr2:88838238-88875128 3 1744 35142 exonic 3.07 1 0,0,1 0 0,0,0 274.643348623853 14.0093335609812 0 138.90997706422 14.7486483410164 0 144.887041284404 16.9683000398384 0 0 0 chimp,horse,human,marmoset,orangutan, antisense antisense A549@0.0286585,AG04450@0.0236905,BJ@0.008311,GM12878@0.115512,H1HESC@0.458653,HELAS3@0.02005,HEPG2@0.0339525,HMEC@0.004688,HSMM@0.0035335,HUVEC@0.0015285,K562@0.004218,MCF7@0,NHEK@0.01712,NHLF@0,SKNSHRA@0.018675, 0 0 0 0 ENSG00000234028.2 ENST00000453008.2 chr2:88927057-88931337 2 1612 2666 exonic 10.28 1 0,0,1 0 0,0,0 9.37965260545906 0 31.963 29.9212158808933 1.86646661665416 51.495 32.991935483871 2.56939234808702 57.704 0 1 chimp,human,macaque,orangutan, lincRNA processed_transcript A549@0.588105,AG04450@0.609879,BJ@0.391616,GM12878@0.943995,H1HESC@0.469191,HELAS3@0.610106,HEPG2@0.914234,HMEC@0.175049,HSMM@0.20296,HUVEC@0.413871,K562@0.75924,MCF7@0.544852,NHEK@0.330414,NHLF@0.350366,SKNSHRA@0.675676, 0 0 0 0 ENSG00000230006.2 ENST00000421951.1 chr2:89065324-89079082 4 1895 11857 intergenic 2.06 0 0,0,1 0 0,0,0 0 0 0 0 0 0 0 1.1103145821034 0 0 0 chimp,human,macaque,orangutan, lincRNA processed_transcript A549@0.044522,AG04450@0.012814,BJ@0.0078685,GM12878@0.045667,H1HESC@0.129052,HELAS3@0.054623,HEPG2@0.0101405,HMEC@0.01174,HSMM@0.000975,HUVEC@0.0186175,K562@0.0588215,MCF7@0.005132,NHEK@0.0146163,NHLF@0.009097,SKNSHRA@0.0021505, 73 2 0 0 ENSG00000230006.2 ENST00000393525.3 chr2:89065385-89106126 15 5380 35333 intergenic 8.22 1 0,1,1 0 0,0,0 0 0 0 1.19944237918216 0.749893866923273 0 47.657063197026 2.71417654883537 0 1 1 chimp,human,macaque,marmoset,orangutan, lincRNA retained_intron A549@0.044522,AG04450@0.012814,BJ@0.0078685,GM12878@0.045667,H1HESC@0.129052,HELAS3@0.054623,HEPG2@0.0101405,HMEC@0.01174,HSMM@0.000975,HUVEC@0.0186175,K562@0.0588215,MCF7@0.005132,NHEK@0.0146163,NHLF@0.009097,SKNSHRA@0.0021505, 0 0 0 0 ENSG00000230006.2 ENST00000427055.1 chr2:89065398-89076092 2 389 10303 intergenic 0 0 0,1,0 0 0,0,0 0 0 0 0 0 0 0 1.2777831699505 0 0 0 chimp,human,macaque,marmoset,orangutan, lincRNA processed_transcript A549@0.044522,AG04450@0.012814,BJ@0.0078685,GM12878@0.045667,H1HESC@0.129052,HELAS3@0.054623,HEPG2@0.0101405,HMEC@0.01174,HSMM@0.000975,HUVEC@0.0186175,K562@0.0588215,MCF7@0.005132,NHEK@0.0146163,NHLF@0.009097,SKNSHRA@0.0021505, 0 0 0 0 ENSG00000230006.2 ENST00000393515.3 chr2:89065419-89106116 17 1720 38945 intergenic 8.22 1 0,1,1 0 0,0,0 0 0 0 0 0.846039286172808 0 0 9.04596225446142 0 0 0 chimp,dog,elephant,guinea_pig,horse,human,macaque,marmoset,opossum,orangutan,pig,rabbit, lincRNA processed_transcript A549@0.044522,AG04450@0.012814,BJ@0.0078685,GM12878@0.045667,H1HESC@0.129052,HELAS3@0.054623,HEPG2@0.0101405,HMEC@0.01174,HSMM@0.000975,HUVEC@0.0186175,K562@0.0588215,MCF7@0.005132,NHEK@0.0146163,NHLF@0.009097,SKNSHRA@0.0021505, 0 0 0 0 ENSG00000230006.2 ENST00000443770.1 chr2:89065460-89073085 3 500 7121 intergenic -2.58 0 0,1,0 0 0,0,0 0 0 0 0 0 0 0 1.84875719702289 0 0 0 chimp,cow,dog,human,marmoset,orangutan, lincRNA processed_transcript A549@0.044522,AG04450@0.012814,BJ@0.0078685,GM12878@0.045667,H1HESC@0.129052,HELAS3@0.054623,HEPG2@0.0101405,HMEC@0.01174,HSMM@0.000975,HUVEC@0.0186175,K562@0.0588215,MCF7@0.005132,NHEK@0.0146163,NHLF@0.009097,SKNSHRA@0.0021505, 0 0 0 0 ENSG00000230006.2 ENST00000454490.1 chr2:89100447-89106125 3 2107 3567 intergenic 6.38 1 0,0,1 0 0,0,0 0 0 0 0 1.80908326324643 0 0 71.8797308662742 0 0 0 chimp,cow,horse,human,macaque,marmoset,orangutan,pig, lincRNA retained_intron A549@0.044522,AG04450@0.012814,BJ@0.0078685,GM12878@0.045667,H1HESC@0.129052,HELAS3@0.054623,HEPG2@0.0101405,HMEC@0.01174,HSMM@0.000975,HUVEC@0.0186175,K562@0.0588215,MCF7@0.005132,NHEK@0.0146163,NHLF@0.009097,SKNSHRA@0.0021505, 0 0 0 0 ENSG00000240040.1 ENST00000452230.1 chr2:89109984-89161075 3 1418 49669 intergenic 5.94 0 0,0,1 0 0,1,0 0 1.91964807022489 13.862 24.8709449929478 5.32704503815257 22.026 48.5860366713681 7.30266363325213 34.748 0 0 chimp,horse,human,macaque,marmoset,orangutan, lincRNA lincRNA A549@0.005415,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0.057035,HSMM@0,HUVEC@0.0020945,K562@0,MCF7@0.002894,NHEK@0.063511,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000240040.1 ENST00000434790.1 chr2:89117788-89124720 2 386 6544 intergenic 0.15 0 0,0,1 0 0,0,0 0 0 0 38.8367875647668 3.22035452322738 0 118.383419689119 3.53667481662592 5.832 0 0 chimp,cow,dog,guinea_pig,horse,human,macaque,marmoset,mouse,orangutan,panda,pig,rabbit,rat, lincRNA lincRNA A549@0.005415,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0.057035,HSMM@0,HUVEC@0.0020945,K562@0,MCF7@0.002894,NHEK@0.063511,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000231486.3 ENST00000418209.1 chr2:89130700-89161435 2 251 30482 intergenic 0.09 0 0,1,1 0 0,1,0 35.2310756972112 3.18286201692802 2.868 41.4661354581673 7.65979922577259 3.85 49.5737051792829 10.2868578177285 10.732 0 0 NA lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0.005002,H1HESC@0.0489115,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000231486.3 ENST00000430694.1 chr2:89156709-89165653 3 1206 7734 intergenic 4.86 0 1,1,1 0 0,1,0 9.90878938640133 0.216317558831135 0 21.1094527363184 6.50206878717352 4.56 42.6849087893864 10.2767002844582 4.672 0 0 cat,chimp,dog,elephant,guinea_pig,horse,human,macaque,marmoset,orangutan,panda,pig,rabbit, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0.005002,H1HESC@0.0489115,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000233850.1 ENST00000448734.1 chr2:95690938-95692454 3 475 1037 intronic 0 0 0,1,1 0 0,0,0 0 23.9151398264224 0 80.5263157894737 59.2295081967213 0 81.7894736842105 45.6374156219865 0 0 0 chimp,horse,human,macaque,marmoset,orangutan,panda, antisense antisense A549@0,AG04450@0,BJ@0,GM12878@0.029229,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000231062.1 ENST00000442200.1 chr2:95717140-95718921 2 595 1184 intronic -8.90 0 0,0,0 0 0,0,0 0 0 30.122 0 15.9349662162162 30.775 0 20.6790540540541 35.465 0 0 chimp,human,macaque,marmoset,orangutan, antisense antisense A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0.0375025,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000233757.2 ENST00000425953.1 chr2:95873283-95880597 5 1091 6215 intergenic -0.46 0 0,1,0 1 0,0,0 179.510540788268 1.37087691069992 0 145.592117323556 4.07723250201126 12.296 123.054995417049 7.4368463395012 16.186 0 0 cat,chimp,cow,dog,elephant,guinea_pig,horse,human,macaque,marmoset,mouse,opossum,orangutan,panda,pig,rabbit, lincRNA lincRNA A549@1.18447,AG04450@1.19775,BJ@0.874444,GM12878@1.23676,H1HESC@3.64548,HELAS3@0.050033,HEPG2@0.002489,HMEC@1.23445,HSMM@0.99011,HUVEC@0.831891,K562@0.0050815,MCF7@0.373569,NHEK@1.35035,NHLF@0.653314,SKNSHRA@1.60843, 0 0 0 0 ENSG00000233757.2 ENST00000444043.2 chr2:95880039-95881351 2 1030 280 intergenic 2.90 0 0,1,0 0 0,0,0 584.132038834951 0 0 432.245631067961 128.65 2.805 313.633009708738 92.7857142857143 6.063 0 0 cat,chimp,cow,dog,elephant,guinea_pig,horse,human,macaque,marmoset,mouse,opossum,orangutan,panda,pig,platypus,rabbit,rat, lincRNA lincRNA A549@1.18447,AG04450@1.19775,BJ@0.874444,GM12878@1.23676,H1HESC@3.64548,HELAS3@0.050033,HEPG2@0.002489,HMEC@1.23445,HSMM@0.99011,HUVEC@0.831891,K562@0.0050815,MCF7@0.373569,NHEK@1.35035,NHLF@0.653314,SKNSHRA@1.60843, 0 0 0 0 ENSG00000235584.1 ENST00000425887.1 chr2:96331832-96334010 2 664 1512 intergenic 0.48 0 0,0,0 0 0,0,0 0 18.2063492063492 0 0 27.9980158730159 0 0 28.5952380952381 0 0 0 cat,chimp,cow,human,macaque,marmoset,orangutan,panda, lincRNA lincRNA A549@0,AG04450@0,BJ@0.0073935,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0.012212,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000232931.1 ENST00000412393.1 chr2:96472866-96480524 5 649 7001 intergenic 1.88 0 0,0,1 0 0,0,0 0 0 0 0 0 0 73.0431432973806 11.9785744893587 0 0 0 chimp,horse,human,macaque,marmoset,mouse,orangutan,panda, lincRNA lincRNA A549@0.801242,AG04450@0.595341,BJ@0.288004,GM12878@1.62973,H1HESC@0.117188,HELAS3@0.362294,HEPG2@0.610658,HMEC@0.200602,HSMM@0.171048,HUVEC@1.45383,K562@0.863921,MCF7@1.28888,NHEK@0.917477,NHLF@0.231835,SKNSHRA@1.0181, 0 0 0 0 ENSG00000232931.1 ENST00000448494.1 chr2:96472866-96481963 2 2349 6746 intergenic 4.10 0 0,0,1 0 0,0,0 0 0 0 0 0 0 30.5900383141762 8.88081826267418 0 0 0 chimp,human,macaque,marmoset,orangutan, lincRNA lincRNA A549@0.801242,AG04450@0.595341,BJ@0.288004,GM12878@1.62973,H1HESC@0.117188,HELAS3@0.362294,HEPG2@0.610658,HMEC@0.200602,HSMM@0.171048,HUVEC@1.45383,K562@0.863921,MCF7@1.28888,NHEK@0.917477,NHLF@0.231835,SKNSHRA@1.0181, 63 2 0 0 ENSG00000228873.1 ENST00000449242.1 chr2:96811341-96812751 2 195 1213 intergenic 0 0 0,1,1 0 0,0,0 0 0 41.656 18.3846153846154 17.0956306677659 59.939 19.3076923076923 18.4583676834295 62.746 0 0 chimp,horse,human,macaque,marmoset,orangutan,rabbit, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0.0997615,H1HESC@0,HELAS3@8.58984,HEPG2@2.02157,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0.067621,NHEK@0,NHLF@0,SKNSHRA@0.129406, 0 0 0 0 ENSG00000204685.5 ENST00000446816.1 chr2:96874154-96908332 3 1524 32650 exonic 8.32 0 1,1,1 1 0,0,1 6.15879265091864 0.878407350689127 153.824 11.1397637795276 2.9904134762634 122.322 12.5557742782152 6.05332312404288 125.308 0 0 chimp,human,macaque,marmoset,orangutan,pig, antisense antisense A549@1.08693,AG04450@0.976484,BJ@1.83012,GM12878@1.28681,H1HESC@0.786064,HELAS3@2.26973,HEPG2@2.10058,HMEC@1.34064,HSMM@1.28979,HUVEC@1.2542,K562@1.64236,MCF7@1.15113,NHEK@0.798844,NHLF@1.3979,SKNSHRA@1.2533, 0 0 0 0 ENSG00000204685.5 ENST00000432267.2 chr2:96905451-96908359 2 1719 1187 intergenic 4.73 0 0,1,1 0 0,0,1 0 0 0 2.30831878999418 3.55181128896377 3.57 2.53170447934846 3.59477674810447 3.71 0 0 chimp,cow,horse,human,macaque,marmoset,orangutan,pig, antisense retained_intron A549@1.08693,AG04450@0.976484,BJ@1.83012,GM12878@1.28681,H1HESC@0.786064,HELAS3@2.26973,HEPG2@2.10058,HMEC@1.34064,HSMM@1.28979,HUVEC@1.2542,K562@1.64236,MCF7@1.15113,NHEK@0.798844,NHLF@1.3979,SKNSHRA@1.2533, 0 0 0 0 ENSG00000230747.1 ENST00000421534.1 chr2:96973001-96987469 2 738 13728 intergenic 8.69 0 1,1,1 1 0,0,0 0 0 0 0 0 0 0 0.366477272727273 0 0 0 chimp,human,macaque,marmoset,orangutan, antisense antisense A549@0.284245,AG04450@0.081934,BJ@0.016267,GM12878@1.49112,H1HESC@0.743513,HELAS3@0.19721,HEPG2@0.248189,HMEC@0,HSMM@0.187577,HUVEC@0.0893815,K562@0.376262,MCF7@0,NHEK@0,NHLF@0.07853,SKNSHRA@1.12721, 0 0 0 0 ENSG00000235480.1 ENST00000425578.1 chr2:97193677-97198043 3 437 3925 intergenic 3.08 0 1,1,1 0 0,0,0 82.5469107551487 12.876178343949 23.585 120.054919908467 24.3312101910828 14.613 131.681922196796 25.3890445859873 15.038 0 0 chimp,elephant,horse,human,macaque,marmoset,orangutan,pig, antisense antisense A549@0.027355,AG04450@0,BJ@0,GM12878@0.215867,H1HESC@0.020677,HELAS3@0.006032,HEPG2@0,HMEC@0,HSMM@0.0093525,HUVEC@0,K562@0.005582,MCF7@0.0069765,NHEK@0,NHLF@0,SKNSHRA@0.170297, 0 0 0 0 ENSG00000246515.1 ENST00000500585.1 chr2:97584843-97591573 3 2256 4470 intronic 5.09 0 0,0,0 0 0,0,0 0 13.5214765100671 0 0.699468085106383 19.7326621923937 0 0.667553191489362 20.1977628635347 0 0 0 chimp,dog,human,macaque,marmoset,orangutan,rabbit, lincRNA lincRNA A549@0.0054965,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0.002415,HMEC@0,HSMM@0.0033125,HUVEC@0,K562@0.321172,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000237837.1 ENST00000422600.1 chr2:98069548-98071970 2 553 1867 intergenic -7.29 0 0,0,0 0 0,0,0 0 0 0 0 0 0 0 0 0 0 0 chimp,human,marmoset, lincRNA lincRNA A549@0.022372,AG04450@0.00581,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0.0062975,K562@0,MCF7@0,NHEK@0,NHLF@0.139046,SKNSHRA@0, 0 0 0 0 ENSG00000230606.3 ENST00000492960.1 chr2:98081683-98091049 4 2959 6401 intergenic 2.38 0 0,0,0 0 0,0,0 0 6.43149507889392 0 0 8.00234338384627 0 30.0932747549848 21.8359631307608 0 0 0 chimp,human,macaque,marmoset,orangutan, lincRNA lincRNA A549@1.22683,AG04450@1.90335,BJ@0.981723,GM12878@2.77207,H1HESC@0.307848,HELAS3@2.28709,HEPG2@1.92369,HMEC@1.029,HSMM@0.578001,HUVEC@6.70449,K562@0.183302,MCF7@1.90304,NHEK@3.55667,NHLF@0.817592,SKNSHRA@1.67241, 63 2 0 0 ENSG00000230606.3 ENST00000411738.1 chr2:98081774-98089122 3 721 6623 intergenic 2.38 0 0,0,0 0 0,0,0 0 6.21591423826061 0 0 7.73410841008606 0 123.50346740638 21.1040314057074 0 0 0 chimp,cow,dog,elephant,horse,human,macaque,marmoset,orangutan,panda,rat, lincRNA lincRNA A549@1.22683,AG04450@1.90335,BJ@0.981723,GM12878@2.77207,H1HESC@0.307848,HELAS3@2.28709,HEPG2@1.92369,HMEC@1.029,HSMM@0.578001,HUVEC@6.70449,K562@0.183302,MCF7@1.90304,NHEK@3.55667,NHLF@0.817592,SKNSHRA@1.67241, 0 0 0 0 ENSG00000241481.1 ENST00000480208.1 chr2:98086678-98100408 3 589 13137 intergenic 6.40 0 0,0,0 0 0,0,0 0 0 0 0 0 0 96 3.19342315597168 0 0 0 chimp,cow,dog,elephant,guinea_pig,horse,human,macaque,marmoset,orangutan,panda,pig,rabbit, lincRNA lincRNA A549@0,AG04450@0.0146795,BJ@0,GM12878@0.0179425,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0.017924, 0 0 0 0 ENSG00000230606.3 ENST00000431244.1 chr2:98088089-98088849 2 667 91 intergenic -4.84 0 0,0,0 0 0,0,0 0 0 0 0 0 0 54.0089955022489 400.879120879121 25.536 1 1 chimp,human,macaque,marmoset,orangutan, lincRNA retained_intron A549@1.22683,AG04450@1.90335,BJ@0.981723,GM12878@2.77207,H1HESC@0.307848,HELAS3@2.28709,HEPG2@1.92369,HMEC@1.029,HSMM@0.578001,HUVEC@6.70449,K562@0.183302,MCF7@1.90304,NHEK@3.55667,NHLF@0.817592,SKNSHRA@1.67241, 0 0 0 0 ENSG00000230606.3 ENST00000430893.1 chr2:98088652-98089794 3 519 619 intergenic -3.44 0 0,0,1 0 0,0,0 0 0 0 0 0 0 83.4682080924856 88.4006462035541 0 0 0 chimp,cow,horse,human,macaque,marmoset,mouse,orangutan,pig, lincRNA lincRNA A549@1.22683,AG04450@1.90335,BJ@0.981723,GM12878@2.77207,H1HESC@0.307848,HELAS3@2.28709,HEPG2@1.92369,HMEC@1.029,HSMM@0.578001,HUVEC@6.70449,K562@0.183302,MCF7@1.90304,NHEK@3.55667,NHLF@0.817592,SKNSHRA@1.67241, 0 0 0 0 ENSG00000228486.2 ENST00000450072.1 chr2:98280680-98292184 4 583 10915 intergenic 5.19 0 0,1,0 0 0,0,0 0 0 53.654 4.20240137221269 0.858818140174072 83.306 9.2229845626072 0.875858909757215 81.092 0 0 chimp,human,orangutan, antisense antisense A549@0.251615,AG04450@0.157216,BJ@0.222321,GM12878@0.698519,H1HESC@0.22046,HELAS3@0.780123,HEPG2@0.74114,HMEC@0.039742,HSMM@0.174422,HUVEC@0.250321,K562@0.546431,MCF7@0.454777,NHEK@0.128529,NHLF@0.027142,SKNSHRA@0.413812, 0 0 0 0 ENSG00000228486.2 ENST00000428157.1 chr2:98286206-98288251 2 548 1495 intergenic 0.36 0 0,0,0 0 0,0,0 0 0 0 9.77189781021898 0 3.509 10.0346715328467 0 3.531 0 0 chimp,human,macaque,marmoset,mouse,orangutan, antisense retained_intron A549@0.251615,AG04450@0.157216,BJ@0.222321,GM12878@0.698519,H1HESC@0.22046,HELAS3@0.780123,HEPG2@0.74114,HMEC@0.039742,HSMM@0.174422,HUVEC@0.250321,K562@0.546431,MCF7@0.454777,NHEK@0.128529,NHLF@0.027142,SKNSHRA@0.413812, 0 0 0 0 ENSG00000228486.2 ENST00000451384.2 chr2:98286209-98319519 10 1346 31946 intergenic 4.09 1 0,0,1 0 0,0,0 0 0 0 14.3008915304606 0.287266011394228 3.509 17.9680534918276 2.28607650410067 3.531 0 0 chimp,horse,human,macaque,marmoset,orangutan, antisense antisense A549@0.251615,AG04450@0.157216,BJ@0.222321,GM12878@0.698519,H1HESC@0.22046,HELAS3@0.780123,HEPG2@0.74114,HMEC@0.039742,HSMM@0.174422,HUVEC@0.250321,K562@0.546431,MCF7@0.454777,NHEK@0.128529,NHLF@0.027142,SKNSHRA@0.413812, 0 0 0 0 ENSG00000228486.2 ENST00000458149.2 chr2:98286239-98317787 8 806 30728 intergenic -1.65 0 0,0,0 0 0,0,0 0 0 0 10.697270471464 0.294096589429836 3.509 12.7617866004963 2.3727870346264 3.531 0 0 chimp,guinea_pig,horse,human,macaque,marmoset,mouse,orangutan,rabbit, antisense antisense A549@0.251615,AG04450@0.157216,BJ@0.222321,GM12878@0.698519,H1HESC@0.22046,HELAS3@0.780123,HEPG2@0.74114,HMEC@0.039742,HSMM@0.174422,HUVEC@0.250321,K562@0.546431,MCF7@0.454777,NHEK@0.128529,NHLF@0.027142,SKNSHRA@0.413812, 0 0 0 0 ENSG00000228486.2 ENST00000445382.1 chr2:98292284-98319224 5 532 26400 intergenic -5.01 0 0,0,1 0 0,0,0 0 0 0 22.9417293233083 0.376022727272727 0 24.1109022556391 2.7942803030303 0 0 0 chimp,horse,human,macaque,marmoset,orangutan,pig, antisense antisense A549@0.251615,AG04450@0.157216,BJ@0.222321,GM12878@0.698519,H1HESC@0.22046,HELAS3@0.780123,HEPG2@0.74114,HMEC@0.039742,HSMM@0.174422,HUVEC@0.250321,K562@0.546431,MCF7@0.454777,NHEK@0.128529,NHLF@0.027142,SKNSHRA@0.413812, 0 0 0 0 ENSG00000227987.1 ENST00000413274.1 chr2:98963458-98967603 2 539 3604 intronic -9.66 0 0,1,0 0 0,0,0 0 0 0 2.92764378478664 7.55049944506104 45.107 2.94990723562152 7.97530521642619 43.834 0 0 human,macaque,marmoset,orangutan, sense_intronic sense_intronic A549@0,AG04450@0,BJ@0.001933,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000226791.2 ENST00000419865.1 chr2:99378401-99385473 3 923 6145 intergenic 3.62 0 0,0,0 0 0,0,0 0 3.03173311635476 140.505 0 5.38795768917819 57.063 0 5.53978844589097 60.851 0 0 chimp,horse,human,macaque,orangutan, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0.0045075,HEPG2@0.0474595,HMEC@0,HSMM@0,HUVEC@0.037743,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000239795.1 ENST00000448595.1 chr2:99385424-99388543 2 546 2571 intergenic 6.27 0 0,1,0 0 0,0,0 0 54.6499416569428 0 0 22.1948658109685 0 0 23.6682224815247 0 0 0 cat,chimp,horse,human,macaque,marmoset,orangutan,panda, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0.007357,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000230393.1 ENST00000434301.1 chr2:100721381-100723966 1 2585 0 exonic 4.52 1 0,1,0 0 0,0,0 59.0410058027079 0 0 68.8758220502901 0 350.927 65.783752417795 0 177.158 0 0 cat,chimp,cow,dog,horse,human,macaque,marmoset,orangutan,panda, antisense antisense A549@0,AG04450@0.197694,BJ@0.235219,GM12878@0.005634,H1HESC@0.001914,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0.01486,NHEK@0,NHLF@0.010446,SKNSHRA@0.0601035, 0 0 0 0 ENSG00000232084.1 ENST00000452354.1 chr2:100824716-100867946 3 3112 40114 intergenic 4.90 0 0,0,1 0 0,0,0 8.24807197943445 10.0280700004986 54.648 4.96754498714653 8.57498628907614 49.134 12.0812982005141 11.4790347509598 80.417 0 0 chimp,human,orangutan, lincRNA lincRNA A549@0,AG04450@0.0367155,BJ@0.0015675,GM12878@0.0097625,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000232084.1 ENST00000441036.1 chr2:100859093-100865724 3 578 6049 intergenic 14.05 0 0,1,0 0 0,0,0 0 0 0 4.67128027681661 3.97735162836833 0 5.2318339100346 7.1811869730534 0 0 0 cat,chimp,horse,human,macaque,marmoset,orangutan, lincRNA lincRNA A549@0,AG04450@0.0367155,BJ@0.0015675,GM12878@0.0097625,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000234988.1 ENST00000414647.1 chr2:101223490-101225813 2 515 1806 intergenic 1.56 0 0,0,1 0 0,0,0 0 0 0 2.88932038834951 0 0.248 3.01747572815534 0 0.259 0 0 chimp,dog,human,macaque,orangutan, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000234988.1 ENST00000424342.1 chr2:101223706-101225820 2 436 1676 intergenic 2.79 0 0,0,1 0 0,0,0 0 0 0 0 0 1.984 0 0 2.072 0 0 cat,chimp,horse,human,macaque,marmoset,orangutan, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000234169.1 ENST00000414965.1 chr2:101286354-101292500 2 560 5584 intergenic 3.02 0 0,0,1 0 0,0,0 0 23.8431232091691 0 0 23.1461318051576 0 0 22.8090974212034 0 0 0 chimp,human,macaque,orangutan, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0.0109245,NHEK@0,NHLF@0,SKNSHRA@0.008081, 0 0 0 0 ENSG00000228488.1 ENST00000443030.1 chr2:101338683-101339344 2 234 425 intergenic 0 0 0,0,0 0 0,0,0 176.735042735043 458.491764705882 59.607 36.0128205128205 424.889411764706 10.074 38.6410256410256 382.868235294118 11.748 0 0 cat,chimp,cow,dog,horse,human,macaque,orangutan,panda,pig,rabbit, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0.027084,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0.0687685, 0 0 0 0 ENSG00000232034.1 ENST00000430586.1 chr2:101439123-101463682 3 714 23841 intronic -1.91 1 0,1,1 0 0,0,0 7.29411764705882 9.20632523803532 101.235 0.404761904761905 10.1162702906757 66.537 6.2156862745098 10.5414621869888 69.519 0 0 chimp,cow,dog,elephant,human,macaque,marmoset,mouse,orangutan,panda, sense_intronic sense_intronic A549@0.760901,AG04450@0.085808,BJ@0.0889025,GM12878@0,H1HESC@0.004114,HELAS3@0.244712,HEPG2@0.449813,HMEC@0.011966,HSMM@0,HUVEC@0.249415,K562@0,MCF7@0.0446185,NHEK@0.10945,NHLF@0.0082495,SKNSHRA@0.284917, 0 0 0 0 ENSG00000230140.1 ENST00000439150.1 chr2:101589110-101592162 3 490 2558 exonic 3.42 1 0,1,0 0 0,0,0 55.4204081632653 23.8131352619234 2.728 30.2081632653061 20.903831118061 0 28.4918367346939 26.840109460516 0 0 0 cat,chimp,dog,horse,human,macaque,marmoset,mouse,orangutan,panda, antisense antisense A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0.028046,HMEC@0,HSMM@0.035018,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0.0328225, 0 0 0 0 ENSG00000230140.1 ENST00000446644.1 chr2:101589110-101593262 3 407 3741 intronic -1.12 1 0,1,0 0 0,0,0 0 24.4367816091954 0 5.48402948402948 17.6535685645549 13.633 8.10810810810811 21.202352312216 19.186 0 0 chimp,human,macaque,marmoset,orangutan, antisense antisense A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0.028046,HMEC@0,HSMM@0.035018,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0.0328225, 0 0 0 0 ENSG00000230140.1 ENST00000433012.1 chr2:101592088-101593623 2 487 1046 intronic -12.68 0 0,0,1 0 0,0,0 0.509240246406571 10.1950286806883 0 0 0 14.233 0 0 20.558 0 0 cat,chimp,dog,elephant,horse,human,macaque,marmoset,orangutan, antisense antisense A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0.028046,HMEC@0,HSMM@0.035018,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0.0328225, 0 0 0 0 ENSG00000223947.1 ENST00000452364.1 chr2:101610138-101618706 2 3483 5083 exonic 5.09 0 0,1,0 0 0,0,0 24.3565891472868 68.6867991343695 62.488 20.3485501004881 55.8253000196734 82.32 23.2652885443583 65.0513476293527 86.664 0 0 chimp,human,macaque,marmoset,orangutan, antisense antisense A549@0.087919,AG04450@0.031078,BJ@0.0388325,GM12878@0.0866465,H1HESC@0.164485,HELAS3@0.173538,HEPG2@0.108242,HMEC@0.00235,HSMM@0.0174885,HUVEC@0.0750055,K562@0.0600275,MCF7@0.0625595,NHEK@0.0115793,NHLF@0.012899,SKNSHRA@0.066084, 0 0 0 0 ENSG00000246943.1 ENST00000500257.1 chr2:101768122-101771872 2 2474 1274 intergenic 9.46 0 1,1,1 1 0,0,0 7.58326596604689 0 68.037 2.07599029911075 0 112.189 2.20412287793048 0 119.438 0 0 cat,chimp,dog,horse,human,macaque,marmoset,orangutan,panda,pig, lincRNA lincRNA A549@0.237991,AG04450@0.169271,BJ@0.142472,GM12878@0.039663,H1HESC@0.092878,HELAS3@0.193797,HEPG2@0.164109,HMEC@0.28236,HSMM@0.128626,HUVEC@0.175063,K562@0.101237,MCF7@0.270803,NHEK@0.103886,NHLF@0.142554,SKNSHRA@0.561827, 0 0 0 0 ENSG00000223826.1 ENST00000427042.1 chr2:102095852-102103284 3 387 7041 intergenic -0.28 0 0,0,0 0 0,0,0 0 4.84022155943758 5.325 27.8165374677003 7.64763527907968 5.947 34.1395348837209 7.34526345689533 14.883 0 0 cat,chimp,cow,dog,horse,human,macaque,marmoset,orangutan,panda,pig,rabbit, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0.0149245,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0.0149535,SKNSHRA@0, 0 0 0 0 ENSG00000250054.1 ENST00000508786.1 chr2:102578518-102603629 3 3724 21383 intergenic 5.35 0 0,0,1 0 0,0,0 0 0.626291914137399 0 0.607948442534909 0.493522892017023 9.374 1.14285714285714 0.747088808866857 9.803 0 0 chimp,human,macaque,orangutan,rabbit, lincRNA lincRNA A549@0.001482,AG04450@0.004933,BJ@0.002597,GM12878@0,H1HESC@0.001328,HELAS3@0,HEPG2@0.0126975,HMEC@0.124146,HSMM@0.004893,HUVEC@0,K562@0.001318,MCF7@0.0011035,NHEK@0.683441,NHLF@0.0046745,SKNSHRA@0.002437, 0 0 0 0 ENSG00000226925.1 ENST00000428188.1 chr2:102789081-102798568 3 379 9104 exonic -0.86 1 0,0,1 0 0,0,0 0 19.0559094903339 0 12.910290237467 26.9429920913884 0 13.2849604221636 30.5375659050967 0 0 0 chimp,dog,guinea_pig,horse,human,macaque,marmoset,orangutan,pig,rabbit, antisense antisense A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000236525.1 ENST00000436582.1 chr2:103050417-103051800 2 1198 183 intronic -0.50 0 0,0,0 0 0,0,0 0 0 0 0 0 3.78 0 11.9508196721311 3.892 0 0 chimp,elephant,horse,human,macaque,marmoset,orangutan,panda, sense_intronic sense_intronic A549@0,AG04450@0,BJ@0,GM12878@0.078011,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0.0167375,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000234389.1 ENST00000450893.1 chr2:103055173-103056935 3 1324 434 intronic 0.13 0 0,0,1 0 0,0,0 0 0 0 0 0 0 0 0 0 0 0 horse,human,macaque,marmoset,orangutan,panda, sense_intronic sense_intronic A549@0,AG04450@0,BJ@0,GM12878@0.014346,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0.0065315,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000236757.1 ENST00000447987.1 chr2:103489798-103512180 4 704 21672 intergenic 6.65 0 0,0,0 0 0,0,0 32.6761363636364 27.1306755260244 0 4.85653409090909 20.6129568106312 0 9.91477272727273 23.3650332225914 0 0 0 chimp,dog,horse,human,macaque,orangutan, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0.021138,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000224095.1 ENST00000431897.1 chr2:103583866-103600887 4 433 16582 intergenic 1.40 0 0,0,0 0 0,0,0 37.7136258660508 57.8163068387408 0 57.9076212471132 44.4943312025087 0 67.7228637413395 49.6845374502472 0 0 0 cat,chimp,cow,dog,elephant,guinea_pig,horse,human,macaque,marmoset,mouse,orangutan,pig,rabbit,rat, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000227680.1 ENST00000435291.1 chr2:103603781-103605023 3 546 692 intergenic -4.50 1 0,0,0 0 0,0,0 9.26739926739927 12.2976878612717 47.886 0 0 33.602 0 0 42.484 0 0 cat,chimp,elephant,human,macaque,marmoset,orangutan, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0.021854,H1HESC@0.023461,HELAS3@0,HEPG2@0.003963,HMEC@0,HSMM@0,HUVEC@0,K562@0.018054,MCF7@0.007324,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000224850.1 ENST00000453878.1 chr2:103628237-103636356 2 476 7641 intergenic -2.33 0 0,0,0 0 0,0,0 0 10.2986520088994 202.735 0 19.5089647951839 116.378 0 21.1192252322994 128.526 0 0 chimp,human,macaque,marmoset,orangutan,pig,rabbit, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0.0124345,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0.011173,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000229209.1 ENST00000422683.1 chr2:103726217-103792718 4 634 65861 intergenic 0.93 0 0,0,0 0 0,0,0 0 48.5822565706564 409.117 0 52.3272801809872 374.613 9.96372239747634 58.760723341583 431.186 0 0 chimp,human,macaque,marmoset,orangutan, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0.007348,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000232597.1 ENST00000455716.1 chr2:104473428-104496667 3 577 22658 intergenic -3.39 0 0,0,0 0 0,0,0 235.580589254766 64.3527231000088 386.634 278.599653379549 42.4996910583458 368.676 291.915077989601 42.0157560243622 375.562 0 0 chimp,dog,human,macaque,marmoset,orangutan, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000236141.1 ENST00000447761.1 chr2:104482204-104486146 4 541 3395 intergenic 0.48 0 0,0,0 0 0,0,0 116.103512014787 8.78262150220913 0 55.6950092421442 2.53784977908689 0 71.5711645101664 3.98939617083947 0 0 0 chimp,horse,human,macaque,marmoset,opossum,orangutan,pig,rabbit, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000256637.1 ENST00000537492.1 chr2:104490768-104694062 4 548 202740 intergenic 0 0 0,0,0 0 0,0,0 308.534671532847 48.1543158725461 547.2 134.370437956204 40.1802061753971 386.087 158.724452554745 42.6127552530334 389.975 0 0 cat,chimp,cow,dog,elephant,guinea_pig,horse,human,macaque,marmoset,mouse,opossum,orangutan,panda,pig,platypus,rabbit, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000256637.1 ENST00000544869.1 chr2:104490789-104694236 3 543 202900 intergenic -4.58 0 0,0,0 0 0,0,0 248.574585635359 48.2115327747659 562.32 122.318600368324 40.1485214391326 387.37 142.031307550645 42.5791522917693 394.756 0 0 chimp,cow,dog,elephant,guinea_pig,horse,human,macaque,marmoset,mouse,orangutan,pig,rabbit, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000256637.1 ENST00000545549.1 chr2:104668433-104693981 3 572 24972 intergenic -4.51 0 0,0,0 0 0,0,0 434.031468531469 30.3630466122057 60.132 258.888111888112 28.9123818676918 33.629 294.167832167832 33.8666106038763 40.179 0 0 cat,chimp,cow,dog,elephant,guinea_pig,horse,human,macaque,marmoset,mouse,opossum,orangutan,panda,pig,platypus,rabbit, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000256637.1 ENST00000412112.3 chr2:104669960-104675714 2 1376 4376 intergenic -7.33 0 0,0,0 0 0,0,0 39.1046511627907 13.2340036563071 435.166 21.4593023255814 5.59277879341865 341.015 26.4142441860465 9.93647166361974 384.439 0 0 chimp,dog,guinea_pig,horse,human,macaque,panda,rabbit, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000228968.1 ENST00000458182.1 chr2:104741726-104763687 5 524 21429 intergenic 0.35 0 0,0,1 0 0,0,0 7.07442748091603 10.3322133557329 0 0 10.2720612254422 0 0 12.1155910215129 0 0 0 chimp,dog,elephant,human,macaque,marmoset,orangutan, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000227157.1 ENST00000416008.1 chr2:105027659-105032070 2 469 3940 intergenic -5.44 0 0,0,0 0 0,0,0 0 183.742385786802 17.507 31.6972281449893 158.789086294416 19.58 11.5799573560768 171.079949238579 23.09 0 0 chimp,dog,horse,human,macaque,marmoset,orangutan,panda,rabbit, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000225765.1 ENST00000449772.1 chr2:105028685-105030466 2 491 1288 intergenic 3.19 0 0,0,0 0 0,0,0 48.9979633401222 181.027950310559 194.877 27.0285132382892 127.162267080745 141.518 18.7718940936864 122.958074534161 154.813 0 0 chimp,cow,dog,elephant,guinea_pig,horse,human,macaque,marmoset,mouse,orangutan,panda,pig,rabbit, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0.004413,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000235597.1 ENST00000451400.1 chr2:105049725-105137290 4 3774 83785 intergenic 3.42 0 0,1,1 0 0,0,0 76.4899311075782 69.5996538759921 94.616 60.7162162162162 57.7229575699708 163.417 73.3073661897191 62.118625052217 180.607 0 1 chimp,human,macaque,orangutan, lincRNA retained_intron A549@0.00796,AG04450@0,BJ@0,GM12878@0.00992,H1HESC@0.011284,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0.001255,K562@0,MCF7@0.0035255,NHEK@0,NHLF@0,SKNSHRA@0.66535, 0 0 0 0 ENSG00000235597.1 ENST00000429464.1 chr2:105050820-105124289 2 2126 71341 intergenic 3.42 0 0,0,0 0 0,0,0 46.9520225776105 70.6912714988576 133.361 55.585136406397 54.89826327077 88.62 57.7812793979304 59.1987356499068 128.035 1 1 chimp,human,macaque,marmoset,orangutan, lincRNA retained_intron A549@0.00796,AG04450@0,BJ@0,GM12878@0.00992,H1HESC@0.011284,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0.001255,K562@0,MCF7@0.0035255,NHEK@0,NHLF@0,SKNSHRA@0.66535, 0 0 0 0 ENSG00000235597.1 ENST00000414442.1 chr2:105050824-105122563 3 575 71160 intergenic 3.42 0 0,1,0 0 0,0,0 169.286956521739 70.8710792580101 134.401 200.413913043478 55.0379005059022 91.556 208.332173913043 59.349311410905 131.087 0 0 chimp,cow,dog,elephant,guinea_pig,horse,human,macaque,marmoset,mouse,opossum,orangutan,panda,pig,platypus,rabbit,rat, lincRNA processed_transcript A549@0.00796,AG04450@0,BJ@0,GM12878@0.00992,H1HESC@0.011284,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0.001255,K562@0,MCF7@0.0035255,NHEK@0,NHLF@0,SKNSHRA@0.66535, 0 0 0 0 ENSG00000235597.1 ENST00000447380.1 chr2:105050836-105129215 4 1470 76903 intergenic 3.42 1 0,1,0 0 0,0,0 61.156462585034 65.5785339973733 137.521 72.4013605442177 51.4077604254711 100.364 75.2619047619048 55.4087616868002 140.243 0 0 chimp,human,macaque,marmoset,mouse,orangutan,panda, lincRNA processed_transcript A549@0.00796,AG04450@0,BJ@0,GM12878@0.00992,H1HESC@0.011284,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0.001255,K562@0,MCF7@0.0035255,NHEK@0,NHLF@0,SKNSHRA@0.66535, 0 0 0 0 ENSG00000234781.2 ENST00000430551.2 chr2:105104916-105126967 6 1451 20590 intergenic 2.66 0 0,0,0 0 0,0,0 145.920744314266 90.4726080621661 0 138.787732598208 72.48644973288 0 157.778773259821 76.3225837785333 0 0 0 cat,chimp,dog,horse,human,macaque,marmoset,mouse,orangutan,panda, lincRNA lincRNA A549@0.0029795,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000231626.1 ENST00000424257.1 chr2:105197279-105198348 2 435 632 intergenic -9.85 0 0,0,0 0 0,0,0 0 0 92.416 0 0 77.863 6.54942528735632 0 88.126 0 0 cat,chimp,dog,elephant,horse,human,macaque,marmoset,opossum,orangutan,panda,pig,rabbit, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000236109.1 ENST00000438566.1 chr2:105199610-105201812 2 449 1751 intergenic 2.74 0 0,1,0 0 0,0,0 147.599109131403 171.07195888064 250.496 136.305122494432 92.6584808680754 227.628 171.824053452116 103.889777270131 266.08 0 0 chimp,cow,dog,elephant,horse,human,macaque,marmoset,orangutan,pig,rat, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000230690.1 ENST00000456999.1 chr2:105275795-105281295 4 557 4937 intergenic 1.27 0 0,0,0 0 0,0,0 188.396768402154 25.7056917156168 98.855 102.631956912029 30.2100465869961 67.743 183.500897666068 39.3465667409358 85.387 0 0 cat,chimp,dog,elephant,horse,human,macaque,marmoset,mouse,orangutan,pig,rabbit,rat, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000228528.1 ENST00000453322.1 chr2:105320216-105321967 2 707 1042 intergenic -4.03 0 0,1,0 0 0,0,0 34.4002828854314 178.971209213052 149.144 17.7977369165488 338.41650671785 178.791 21.2644978783593 317.4443378119 181.132 0 0 cat,chimp,cow,dog,elephant,horse,human,macaque,marmoset,orangutan,panda, lincRNA lincRNA A549@0.0095135,AG04450@0,BJ@0,GM12878@0.028829,H1HESC@0.787254,HELAS3@0,HEPG2@0.009015,HMEC@1.53043,HSMM@0.049962,HUVEC@0,K562@0,MCF7@0.028742,NHEK@0.42451,NHLF@0,SKNSHRA@0.102897, 0 0 0 0 ENSG00000234177.1 ENST00000424321.1 chr2:105363096-105372213 3 2109 7004 intergenic 3.43 0 0,0,0 0 0,0,0 11.8392603129445 5.25399771559109 0 10.8169748696064 7.19531696173615 0 20.0687529634898 17.991861793261 0 0 0 chimp,elephant,human,macaque,marmoset,orangutan,panda, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0.00476,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0.0083355,HUVEC@0,K562@0,MCF7@0.000952,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000234177.1 ENST00000425879.1 chr2:105363098-105374177 4 2430 8643 intergenic 3.08 0 0,0,0 0 0,0,0 101.082716049383 4.2576651625593 77.634 103.007407407407 5.83084577114428 99.958 113.277366255144 14.580006942034 92.11 0 0 chimp,dog,elephant,horse,human,macaque,marmoset,orangutan,panda,pig,rabbit, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0.00476,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0.0083355,HUVEC@0,K562@0,MCF7@0.000952,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000234177.1 ENST00000421071.1 chr2:105365842-105371333 3 479 5008 intergenic -3.13 0 0,0,0 0 0,0,0 52.1273486430063 0.859624600638978 0 45.5553235908142 1.74860223642173 0 70.3110647181628 4.71026357827476 0 0 0 cat,chimp,cow,dog,elephant,horse,human,macaque,marmoset,orangutan,panda, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0.00476,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0.0083355,HUVEC@0,K562@0,MCF7@0.000952,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000233639.1 ENST00000413121.1 chr2:105424030-105467919 4 633 43250 intergenic -6.41 0 1,1,1 0 0,0,0 83.2543443917852 105.413942196532 461.88 69.0758293838863 73.4618497109827 373.061 87.9336492890995 75.4911676300578 413.626 0 0 cat,chimp,dog,elephant,horse,human,macaque,marmoset,orangutan,panda,pig, antisense antisense A549@0.003576,AG04450@0,BJ@0,GM12878@0.011044,H1HESC@0.009589,HELAS3@0.0068765,HEPG2@0,HMEC@0,HSMM@0.013327,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000233639.1 ENST00000443988.1 chr2:105424031-105467911 4 671 43203 intergenic -6.41 0 1,1,1 0 0,0,0 73.150521609538 105.528620697637 465.496 57.5931445603577 73.5417679327824 378.141 74.5365126676602 75.5732935212832 419.274 0 0 cat,chimp,dog,horse,human,macaque,marmoset,mouse,orangutan,panda, antisense antisense A549@0.003576,AG04450@0,BJ@0,GM12878@0.011044,H1HESC@0.009589,HELAS3@0.0068765,HEPG2@0,HMEC@0,HSMM@0.013327,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000233639.1 ENST00000447876.1 chr2:105424031-105469641 4 603 45001 intergenic -6.41 0 0,0,1 0 0,0,0 62.8175787728027 117.861314193018 424.252 43.3250414593698 81.9332681495967 334.6 35.5174129353234 85.356014310793 332.763 0 0 cat,chimp,dog,horse,human,macaque,marmoset,mouse,orangutan,panda,pig, antisense antisense A549@0.003576,AG04450@0,BJ@0,GM12878@0.011044,H1HESC@0.009589,HELAS3@0.0068765,HEPG2@0,HMEC@0,HSMM@0.013327,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000233639.1 ENST00000458253.1 chr2:105424035-105467916 4 743 43132 intergenic -6.41 0 1,1,1 0 0,0,0 69.1036339165545 105.702332375035 463.236 56.2853297442799 73.662825744227 374.966 72.064602960969 75.6976954465362 415.744 0 0 cat,chimp,dog,horse,human,macaque,marmoset,mouse,orangutan,panda, antisense antisense A549@0.003576,AG04450@0,BJ@0,GM12878@0.011044,H1HESC@0.009589,HELAS3@0.0068765,HEPG2@0,HMEC@0,HSMM@0.013327,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000233639.1 ENST00000454729.1 chr2:105424035-105467934 4 718 43175 intergenic -6.41 0 1,1,1 0 0,0,0 82.841225626741 105.597058482918 455.1 74.1643454038997 73.5894614939201 363.536 92.2729805013928 75.6223045744065 403.036 0 0 cat,chimp,dog,horse,human,macaque,marmoset,mouse,orangutan,panda,pig, antisense antisense A549@0.003576,AG04450@0,BJ@0,GM12878@0.011044,H1HESC@0.009589,HELAS3@0.0068765,HEPG2@0,HMEC@0,HSMM@0.013327,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000239587.1 ENST00000454183.1 chr2:105481865-105483954 4 323 1760 intergenic -12.03 0 0,0,1 0 0,0,0 17.2352941176471 23.6761363636364 0 29.3715170278638 11.3130681818182 3.17 35.3219814241486 21.975 3.215 0 0 cat,chimp,cow,dog,elephant,horse,human,macaque,marmoset,orangutan,panda, lincRNA processed_transcript A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000229743.2 ENST00000433433.1 chr2:105481955-105488910 2 3101 3852 intergenic 13.67 0 0,0,0 0 0,0,0 40.504353434376 54.5526998961578 36.113 15.6488229603354 48.3727933541018 22.953 26.1841341502741 56.4171858774663 32.309 0 0 chimp,dog,horse,human,macaque,marmoset,orangutan, lincRNA processed_transcript A549@0,AG04450@0,BJ@0,GM12878@0.002467,H1HESC@0.001876,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0.001325,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000229743.2 ENST00000434764.1 chr2:105486304-105489053 2 453 2294 intergenic 4.35 0 0,1,0 1 0,0,0 202.467991169978 91.602877070619 33.108 41.5695364238411 60.7999128160418 23.634 70.4260485651214 74.3108108108108 31.495 0 0 chimp,dog,elephant,human,macaque,marmoset,mouse,orangutan,panda,pig,rabbit,rat, lincRNA processed_transcript A549@0,AG04450@0,BJ@0,GM12878@0.002467,H1HESC@0.001876,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0.001325,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000224509.1 ENST00000456519.1 chr2:105552869-105654954 3 469 101612 intronic -2.10 0 0,1,0 1 0,0,0 470.238805970149 16.5591859229225 0 364.869936034115 16.3154155021061 0 453.411513859275 18.6511730897925 0 0 0 cat,chimp,cow,dog,elephant,guinea_pig,horse,human,macaque,marmoset,mouse,opossum,orangutan,panda,platypus,rabbit,rat, antisense antisense A549@0.0209015,AG04450@0,BJ@0,GM12878@0,H1HESC@0.0711685,HELAS3@0.004787,HEPG2@0.027562,HMEC@0,HSMM@0,HUVEC@0.022913,K562@0.0098385,MCF7@0.030106,NHEK@0.005594,NHLF@0,SKNSHRA@0.028858, 0 0 0 0 ENSG00000231851.1 ENST00000432211.1 chr2:105713510-105715095 3 444 1137 exonic -1.17 0 0,0,1 0 0,0,0 98.7364864864865 0 0 98.7972972972973 0 0 137.189189189189 0 1.215 0 0 chimp,dog,elephant,guinea_pig,horse,human,macaque,marmoset,opossum,orangutan,rabbit, antisense antisense A549@0,AG04450@0.0052685,BJ@0,GM12878@0,H1HESC@0.0208075,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0.002947,NHLF@0.004365,SKNSHRA@0, 0 0 0 0 ENSG00000231851.1 ENST00000449177.1 chr2:105713518-105719402 4 561 5317 exonic -1.17 0 0,0,1 0 0,0,0 78.144385026738 3.21233778446492 0 78.192513368984 6.17302990408125 0 108.577540106952 9.53846153846154 0 0 0 chimp,elephant,human,macaque,marmoset,opossum,orangutan, antisense antisense A549@0,AG04450@0.0052685,BJ@0,GM12878@0,H1HESC@0.0208075,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0.002947,NHLF@0.004365,SKNSHRA@0, 0 0 0 0 ENSG00000226508.1 ENST00000436841.1 chr2:105760571-105761680 2 795 312 intergenic 10.38 0 0,1,1 0 0,0,0 106.163522012579 51.3974358974359 0 62.0314465408805 42.4903846153846 6.504 79.440251572327 73.4903846153846 20.827 0 0 cat,chimp,dog,elephant,human,marmoset,mouse,orangutan,panda,rabbit, lincRNA lincRNA A549@0,AG04450@0.0334915,BJ@0,GM12878@0.011743,H1HESC@1.55705,HELAS3@0,HEPG2@0.0034225,HMEC@0.047421,HSMM@0.051162,HUVEC@0.0057785,K562@0,MCF7@0.42572,NHEK@0.094059,NHLF@0,SKNSHRA@0.215589, 0 0 0 0 ENSG00000226508.1 ENST00000452037.1 chr2:105760581-105761370 2 513 274 intergenic 10.38 0 1,1,1 0 0,0,0 195.781676413255 0 0 116.399610136452 0 9.854 142.692007797271 34.7080291970803 24.697 0 0 cat,chimp,dog,elephant,horse,human,marmoset,mouse,orangutan,panda,rabbit,rat, lincRNA lincRNA A549@0,AG04450@0.0334915,BJ@0,GM12878@0.011743,H1HESC@1.55705,HELAS3@0,HEPG2@0.0034225,HMEC@0.047421,HSMM@0.051162,HUVEC@0.0057785,K562@0,MCF7@0.42572,NHEK@0.094059,NHLF@0,SKNSHRA@0.215589, 0 0 0 0 ENSG00000226508.1 ENST00000438148.1 chr2:105760600-105761882 3 412 866 intergenic 10.38 0 0,1,1 0 0,0,0 204.854368932039 18.5173210161663 0 84.9757281553398 20.608545034642 16.219 114.165048543689 32.1304849884527 32.05 0 0 cat,chimp,dog,horse,human,marmoset,orangutan, lincRNA lincRNA A549@0,AG04450@0.0334915,BJ@0,GM12878@0.011743,H1HESC@1.55705,HELAS3@0,HEPG2@0.0034225,HMEC@0.047421,HSMM@0.051162,HUVEC@0.0057785,K562@0,MCF7@0.42572,NHEK@0.094059,NHLF@0,SKNSHRA@0.215589, 0 0 0 0 ENSG00000235319.1 ENST00000433219.1 chr2:105940667-105946986 4 670 5643 intronic 1.76 0 0,1,0 0 0,0,0 0 7.53092326776537 0 0 12.4805954279638 0 0 13.9035973772816 0 0 0 chimp,human,macaque,marmoset,orangutan, lincRNA lincRNA A549@0.095449,AG04450@0.0404115,BJ@0.0468,GM12878@0.147507,H1HESC@0.0960645,HELAS3@0.183534,HEPG2@0.725654,HMEC@0.018225,HSMM@0.062614,HUVEC@0.0942625,K562@0.120322,MCF7@0.187423,NHEK@0.0347587,NHLF@0.0432315,SKNSHRA@0.0756465, 0 0 0 0 ENSG00000243840.1 ENST00000415627.1 chr2:105990550-105992540 4 777 1207 intronic 2.67 0 0,1,0 0 0,0,0 0 8.48467274233637 87.162 0 0 91.644 0 0 118.999 0 0 chimp,human,macaque,marmoset,orangutan, lincRNA processed_transcript A549@0,AG04450@0.002413,BJ@0.0135665,GM12878@0.0426645,H1HESC@0,HELAS3@0.0036415,HEPG2@0,HMEC@0.020971,HSMM@0.008861,HUVEC@0.0038105,K562@0.002973,MCF7@0.002918,NHEK@0.00308233,NHLF@0.029352,SKNSHRA@0, 0 0 0 0 ENSG00000238273.2 ENST00000457290.1 chr2:105992323-105995298 2 2006 967 intronic 12.18 0 0,1,0 0 0,0,0 0 0 10.241 0 0 0 0 0 0 0 0 chimp,elephant,human,macaque,orangutan, antisense antisense A549@0.0013755,AG04450@0.007403,BJ@0.018751,GM12878@0.116349,H1HESC@0.015524,HELAS3@0.023785,HEPG2@0.0673575,HMEC@0,HSMM@0.023608,HUVEC@0.020098,K562@0.0145185,MCF7@0.003894,NHEK@0.00977733,NHLF@0.014658,SKNSHRA@0.0047315, 0 0 0 0 ENSG00000235522.1 ENST00000427050.1 chr2:106471199-106473633 3 650 1780 exonic -0.58 0 0,0,0 0 0,0,0 281.927692307692 7.19719101123596 23.7 194.835384615385 3.37752808988764 33.864 235.04 5.3561797752809 35.73 0 0 cat,chimp,cow,dog,elephant,horse,human,macaque,marmoset,mouse,opossum,orangutan,panda,pig,platypus,rat, antisense antisense A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0.00390967,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000234162.1 ENST00000413151.1 chr2:106575540-106578462 2 422 2498 intergenic 0.42 0 0,1,0 0 0,0,0 0 0 0 0 1.24619695756605 0 0 1.27261809447558 0 0 0 chimp,horse,human,macaque,marmoset, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000234162.1 ENST00000423727.1 chr2:106575643-106576765 2 186 934 intergenic -2.02 0 0,0,1 0 0,0,0 0 0 0 0 3.33297644539615 0 0 3.40364025695931 0 0 0 chimp,human,macaque,marmoset,orangutan, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000233339.1 ENST00000419904.1 chr2:106795998-106800253 2 431 3822 intronic 2.26 0 0,0,0 0 0,0,0 55.5823665893272 12.0355834641549 0 0 1.93485086342229 0 0 2.01072736787023 0 0 0 cat,chimp,dog,horse,human,macaque,marmoset,orangutan,panda, antisense antisense A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000231505.1 ENST00000431411.1 chr2:107138359-107154535 3 551 15621 intergenic 2.07 0 0,0,1 0 0,0,0 0 0 0 0 0 0 0 0 0 0 0 chimp,human,macaque,marmoset, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0.0072775,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000232001.1 ENST00000451464.1 chr2:107159470-107160753 2 509 772 intergenic -0.60 1 0,0,1 0 0,0,0 0 0 0 0 0 0 0 0 0 0 0 chimp,human,macaque,orangutan, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@2.19399,H1HESC@0.010658,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0.038451,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000238250.1 ENST00000446058.1 chr2:107439379-107441487 2 386 1720 intronic -6.61 1 0,0,0 0 0,0,0 0 0 0 0 0 0 0 3.64825581395349 0 0 0 cat,chimp,dog,elephant,human,macaque,marmoset,orangutan,panda, sense_intronic sense_intronic A549@0.0454595,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0.004958, 0 0 0 0 ENSG00000227294.1 ENST00000425419.1 chr2:107450920-107457663 2 550 6191 intronic 2.02 0 0,0,0 0 0,0,0 0 11.3269261831691 91.6 0 4.78000323049588 64.967 0 5.89193991277661 70.586 0 0 chimp,human,macaque,marmoset,orangutan, antisense antisense A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000229457.1 ENST00000443123.1 chr2:107871147-107982329 4 856 110320 intergenic 1.07 1 0,0,0 0 0,0,0 10.2102803738318 2.64639231327049 0 0 2.78736403190718 2.893 14.5829439252336 8.0409717186367 2.992 0 0 chimp,human,macaque,marmoset,orangutan, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0.0126775,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000229457.1 ENST00000455614.1 chr2:107882609-107981999 6 485 98895 intergenic 1.49 0 0,0,0 0 0,0,0 0 2.95212093634663 0 0 3.10937863390465 0 0 4.48988320946459 0 0 0 chimp,human,macaque,marmoset,orangutan, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0.0126775,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000225588.2 ENST00000422203.2 chr2:107978738-108022716 3 645 43329 intergenic 1.60 0 0,0,0 0 0,0,0 0 2.51846381093058 0 0 2.09344996307238 4.196 0 3.04865214180207 37.099 0 0 chimp,human,macaque,marmoset,orangutan, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0.004178,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000225588.2 ENST00000413708.1 chr2:107978775-108023785 4 612 44392 intergenic 1.60 0 0,0,0 0 0,0,0 0 2.45810055865922 0 0 2.04327356280411 4.196 0 2.97558118579924 37.099 0 0 chimp,human,macaque,marmoset,orangutan, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0.004178,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000225588.2 ENST00000443833.1 chr2:107997648-108017142 2 317 19175 intergenic -2.38 0 0,0,0 0 0,0,0 0 4.00834419817471 0 0 2.70315514993481 0 0 3.01898305084746 0 0 0 chimp,human,macaque,marmoset, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0.004178,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000237880.1 ENST00000414300.1 chr2:108002088-108159105 5 604 156405 intergenic 4.73 0 0,0,0 0 0,0,0 0 2.47648732457402 0 0 1.54034078194431 0 0 2.53539848470317 0 0 0 chimp,horse,human,macaque,marmoset, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0.004063,HELAS3@0.0113855,HEPG2@0,HMEC@0,HSMM@0.0273935,HUVEC@0,K562@0.214602,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000224568.1 ENST00000443205.1 chr2:108145943-108172782 3 1536 25299 intergenic -0.19 0 0,0,1 0 0,0,0 0 0 0 0 0.995493893039251 0 0 3.59875884422309 0 0 0 chimp,human,macaque,marmoset,orangutan, lincRNA lincRNA A549@0.0014105,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0.005317,HMEC@0,HSMM@0.0607255,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0.008848, 0 0 0 0 ENSG00000224568.1 ENST00000439893.1 chr2:108159205-108172095 2 578 12310 intergenic -1.01 0 0,0,0 0 0,0,0 0 0 0 0 1.94882209585703 0 0 6.81535337124289 0 0 0 NA lincRNA lincRNA A549@0.0014105,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0.005317,HMEC@0,HSMM@0.0607255,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0.008848, 0 0 0 0 ENSG00000232991.1 ENST00000441383.1 chr2:108370568-108438585 5 535 67474 intergenic -2.74 0 0,0,0 0 0,0,0 0 3.97747280433945 0 0 4.52286806770015 0 0 6.43358923437176 0 0 0 chimp,human,macaque,marmoset,orangutan, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000232991.1 ENST00000419650.1 chr2:108370601-108428804 4 573 57624 intergenic 0 0 0,0,0 0 0,0,0 0 3.86550742746078 0 0 3.74569623767874 0 0 5.60580660835763 0 0 0 chimp,human,macaque,marmoset,orangutan, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000230651.1 ENST00000457647.1 chr2:108439519-108443285 3 1727 2035 intergenic -1.72 0 0,0,0 0 0,0,0 0 0 0 1.73132599884192 0 14.716 3.29646786334684 0 129.342 0 0 chimp,horse,human,macaque,marmoset,orangutan,panda, antisense antisense A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0.0015755,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000230651.1 ENST00000417284.1 chr2:108440497-108442257 3 458 1298 intergenic -2.62 0 0,0,0 0 0,0,0 0 0 0 0 0 0 0 0 0 0 0 chimp,human,macaque,marmoset,orangutan,panda, antisense antisense A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0.0015755,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000231221.1 ENST00000424355.1 chr2:108665656-108669211 3 385 3166 intergenic -0.87 0 0,0,0 0 0,0,0 73.4909090909091 30.7239418825016 0 106.12987012987 6.24036639292483 0 92.5636363636364 11.9791535060013 0 0 0 cat,chimp,cow,dog,elephant,horse,human,macaque,marmoset,mouse,orangutan,rabbit,rat, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0.151918,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0.01266,MCF7@0,NHEK@0.00680533,NHLF@0,SKNSHRA@1.18195, 0 0 0 0 ENSG00000225328.1 ENST00000445083.1 chr2:108784204-108834297 5 606 49479 intergenic -2.19 0 0,0,0 0 0,0,0 0 1.55708482386467 0 0 0.956385537298652 0 0 2.03712686190101 0 0 0 chimp,human,macaque,marmoset,orangutan, antisense antisense A549@0.010161,AG04450@0.035333,BJ@0.0120885,GM12878@0.0076725,H1HESC@0.054422,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0.175565,HUVEC@0,K562@0,MCF7@0.00673,NHEK@0.008643,NHLF@0,SKNSHRA@0.497614, 0 0 0 0 ENSG00000237223.1 ENST00000427208.1 chr2:108938694-108970255 4 1871 29684 intergenic 1.92 0 0,0,0 0 0,0,0 0 0 0 4.54836985569214 0.311615685217626 0 33.8209513629075 3.27294165206845 0 0 0 human,macaque,orangutan, lincRNA lincRNA A549@0.0029465,AG04450@0.0128305,BJ@0.0051625,GM12878@0.02681,H1HESC@0.0066385,HELAS3@0,HEPG2@0.0099915,HMEC@0,HSMM@0.001216,HUVEC@0,K562@0,MCF7@0,NHEK@0.00140833,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000214184.3 ENST00000322353.3 chr2:109123971-109150652 3 555 26122 exonic 3.70 0 1,1,1 1 0,0,0 44.8558558558559 2.85001148457239 0 59.9981981981982 6.26927494066304 20.05 60.7081081081081 6.62299977030855 15.17 0 0 chimp,dog,elephant,human,macaque,marmoset,orangutan, antisense antisense A549@0.37317,AG04450@0.14194,BJ@0.110475,GM12878@0.493515,H1HESC@0.0480455,HELAS3@0.302347,HEPG2@0.292736,HMEC@0.014676,HSMM@0.036336,HUVEC@0.062457,K562@0.541802,MCF7@0.0387105,NHEK@0.143996,NHLF@0.0308175,SKNSHRA@0.336326, 0 0 0 0 ENSG00000214184.3 ENST00000440975.1 chr2:109128145-109150638 2 572 21919 intergenic 3.70 0 0,1,1 1 0,0,0 0 0.80797481636936 0 0 2.77731648341621 20.05 0 3.10716729777818 15.17 0 0 human,macaque, antisense antisense A549@0.37317,AG04450@0.14194,BJ@0.110475,GM12878@0.493515,H1HESC@0.0480455,HELAS3@0.302347,HEPG2@0.292736,HMEC@0.014676,HSMM@0.036336,HUVEC@0.062457,K562@0.541802,MCF7@0.0387105,NHEK@0.143996,NHLF@0.0308175,SKNSHRA@0.336326, 0 0 0 0 ENSG00000228763.1 ENST00000411710.1 chr2:109293251-109295057 3 474 1328 intronic 2.70 0 0,0,1 0 0,0,0 46.4029535864979 15.3614457831325 0 29.9345991561181 22.4051204819277 1.434 31.210970464135 26.9856927710843 4.624 0 0 chimp,cow,human,macaque,marmoset,orangutan, antisense antisense A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 162 2 0 0 ENSG00000230696.1 ENST00000425576.1 chr2:110352270-110363275 2 608 10395 intronic 0 0 0,0,1 0 0,0,0 0 0 39.928 3.14473684210526 0.671476671476671 34.709 4.90131578947368 3.67849927849928 35.604 0 0 chimp,horse,human,macaque,marmoset,orangutan,panda, processed_transcript processed_transcript A549@0.035876,AG04450@0.008503,BJ@0.014418,GM12878@0.0087425,H1HESC@0,HELAS3@0.0080025,HEPG2@0.0194595,HMEC@0,HSMM@0,HUVEC@0.0077585,K562@0,MCF7@0,NHEK@0.00903133,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000186148.6 ENST00000417926.1 chr2:110693919-110726154 5 2913 29314 intergenic 3.13 0 0,0,0 0 0,1,0 6.64572605561277 0.114143412703828 0 42.6580844490216 0.99051647676878 0 78.219704771713 2.26120624957358 0 0 1 chimp,human,marmoset,orangutan, processed_transcript retained_intron A549@0.116239,AG04450@1.54633,BJ@1.67756,GM12878@0,H1HESC@1.22409,HELAS3@0.038047,HEPG2@0.314318,HMEC@0.268708,HSMM@0.340033,HUVEC@8.97416,K562@0.0571605,MCF7@0.224336,NHEK@0.319893,NHLF@0.143425,SKNSHRA@0.966438, 60 2 0 0 ENSG00000186148.6 ENST00000424535.1 chr2:110694356-110726080 4 792 30926 intergenic 0.05 0 0,0,0 0 0,1,0 24.4431818181818 0.108193752829335 0 130.549242424242 1.61365841039902 0 227.494949494949 3.68502231132381 0 0 0 cat,chimp,cow,dog,elephant,guinea_pig,horse,human,marmoset,opossum,orangutan,panda, processed_transcript processed_transcript A549@0.116239,AG04450@1.54633,BJ@1.67756,GM12878@0,H1HESC@1.22409,HELAS3@0.038047,HEPG2@0.314318,HMEC@0.268708,HSMM@0.340033,HUVEC@8.97416,K562@0.0571605,MCF7@0.224336,NHEK@0.319893,NHLF@0.143425,SKNSHRA@0.966438, 113 2 66 2 ENSG00000186148.6 ENST00000424113.1 chr2:110694394-110725806 6 781 30621 intergenic 3.13 0 0,0,0 0 0,1,0 24.7874519846351 0.109271415041965 0 132.387964148528 1.6297312302015 0 239.722151088348 3.49159073838216 0 0 0 chimp,dog,guinea_pig,human,marmoset,orangutan,rabbit, processed_transcript processed_transcript A549@0.116239,AG04450@1.54633,BJ@1.67756,GM12878@0,H1HESC@1.22409,HELAS3@0.038047,HEPG2@0.314318,HMEC@0.268708,HSMM@0.340033,HUVEC@8.97416,K562@0.0571605,MCF7@0.224336,NHEK@0.319893,NHLF@0.143425,SKNSHRA@0.966438, 0 0 0 0 ENSG00000186148.6 ENST00000454928.1 chr2:110695015-110742667 4 1921 45725 intergenic 55.57 1 0,0,0 0 0,1,0 0 0.507009294696556 0 0 6.71332968835429 7.192 296.336803748048 16.2331547293603 7.685 0 0 guinea_pig,human, processed_transcript processed_transcript A549@0.116239,AG04450@1.54633,BJ@1.67756,GM12878@0,H1HESC@1.22409,HELAS3@0.038047,HEPG2@0.314318,HMEC@0.268708,HSMM@0.340033,HUVEC@8.97416,K562@0.0571605,MCF7@0.224336,NHEK@0.319893,NHLF@0.143425,SKNSHRA@0.966438, 81 2 45 2 ENSG00000186148.6 ENST00000435951.1 chr2:110695412-110722317 5 671 26226 intergenic 0.77 0 0,0,0 0 0,1,0 28.8509687034277 0.127583314268283 0 73.7451564828614 1.57465873560589 7.192 120.071535022355 3.16540837336994 7.685 0 0 chimp,dog,human,marmoset,orangutan,rabbit, processed_transcript processed_transcript A549@0.116239,AG04450@1.54633,BJ@1.67756,GM12878@0,H1HESC@1.22409,HELAS3@0.038047,HEPG2@0.314318,HMEC@0.268708,HSMM@0.340033,HUVEC@8.97416,K562@0.0571605,MCF7@0.224336,NHEK@0.319893,NHLF@0.143425,SKNSHRA@0.966438, 0 0 0 0 ENSG00000186148.6 ENST00000433786.1 chr2:110705291-110726129 3 727 20107 intergenic 3.63 0 0,0,0 0 0,1,0 0 1.15298154871438 0 94.980742778542 3.19431043915055 13.676 185.330123796424 5.6123738001691 39.993 0 0 cat,chimp,cow,dog,elephant,guinea_pig,horse,human,marmoset,opossum,orangutan,panda, processed_transcript processed_transcript A549@0.116239,AG04450@1.54633,BJ@1.67756,GM12878@0,H1HESC@1.22409,HELAS3@0.038047,HEPG2@0.314318,HMEC@0.268708,HSMM@0.340033,HUVEC@8.97416,K562@0.0571605,MCF7@0.224336,NHEK@0.319893,NHLF@0.143425,SKNSHRA@0.966438, 0 0 0 0 ENSG00000186148.6 ENST00000425917.1 chr2:110720966-110722701 2 597 1136 intergenic -3.24 0 0,0,0 0 0,1,0 37.2311557788945 0.631161971830986 0 113.84757118928 1.78697183098592 6.214 178.082077051926 2.90757042253521 6.734 0 0 chimp,cow,dog,elephant,horse,human,marmoset,orangutan,panda,rabbit, processed_transcript retained_intron A549@0.116239,AG04450@1.54633,BJ@1.67756,GM12878@0,H1HESC@1.22409,HELAS3@0.038047,HEPG2@0.314318,HMEC@0.268708,HSMM@0.340033,HUVEC@8.97416,K562@0.0571605,MCF7@0.224336,NHEK@0.319893,NHLF@0.143425,SKNSHRA@0.966438, 139 2 84 2 ENSG00000204588.5 ENST00000419296.1 chr2:110744640-110752858 4 2432 5780 intergenic 12.82 0 0,0,0 0 0,0,0 0 0 0 0 0 0 239.159950657895 95.6278546712803 260.21 0 0 chimp,human,macaque,orangutan, lincRNA processed_transcript A549@6.39756,AG04450@0.247895,BJ@0.485816,GM12878@0.122661,H1HESC@1.16114,HELAS3@3.42411,HEPG2@1.21462,HMEC@0.610916,HSMM@0.123658,HUVEC@3.04282,K562@0,MCF7@12.0335,NHEK@2.53276,NHLF@0.282833,SKNSHRA@0.108885, 66 2 0 0 ENSG00000204588.5 ENST00000336905.3 chr2:110745849-110753717 2 2269 5597 intergenic 2.18 0 0,0,0 0 0,0,0 0 0 0 0 0 0 151.413397972675 87.7591566910845 304.502 0 0 chimp,human,macaque,marmoset,orangutan, lincRNA processed_transcript A549@6.39756,AG04450@0.247895,BJ@0.485816,GM12878@0.122661,H1HESC@1.16114,HELAS3@3.42411,HEPG2@1.21462,HMEC@0.610916,HSMM@0.123658,HUVEC@3.04282,K562@0,MCF7@12.0335,NHEK@2.53276,NHLF@0.282833,SKNSHRA@0.108885, 0 0 0 0 ENSG00000175701.6 ENST00000414416.2 chr2:110969106-111002997 9 2042 31833 intergenic 26.52 0 0,0,1 0 0,0,0 8.55827619980411 1.06612634687274 0 48.7174338883448 0.401878553702133 5.989 56.6459353574926 1.86495146546037 6.166 0 1 chimp,human,marmoset,orangutan, lincRNA non_coding A549@3.69074,AG04450@0.407859,BJ@2.66763,GM12878@0.885407,H1HESC@4.25194,HELAS3@1.30036,HEPG2@2.81291,HMEC@1.31653,HSMM@1.73103,HUVEC@1.59801,K562@1.57154,MCF7@0.89936,NHEK@2.35939,NHLF@1.08928,SKNSHRA@1.63109, 0 0 0 0 ENSG00000175701.6 ENST00000426713.1 chr2:110969107-110970400 3 458 831 intergenic 22.08 0 0,0,1 0 0,0,0 38.1572052401747 0 0 209.056768558952 10.5523465703971 0 237.38864628821 11.1901323706378 0 0 0 cat,chimp,cow,dog,guinea_pig,horse,human,macaque,marmoset,mouse,orangutan,panda,pig,rabbit,rat, lincRNA non_coding A549@3.69074,AG04450@0.407859,BJ@2.66763,GM12878@0.885407,H1HESC@4.25194,HELAS3@1.30036,HEPG2@2.81291,HMEC@1.31653,HSMM@1.73103,HUVEC@1.59801,K562@1.57154,MCF7@0.89936,NHEK@2.35939,NHLF@1.08928,SKNSHRA@1.63109, 0 0 0 0 ENSG00000175772.10 ENST00000436665.2 chr2:111132715-111142019 3 2241 7059 intergenic 2.18 0 0,0,0 0 0,0,0 0 0 0 0 0 0 251.869254796966 142.287151154554 248.327 0 1 chimp,human,macaque,orangutan, lincRNA processed_transcript A549@7.39427,AG04450@0.114063,BJ@0.397282,GM12878@0.127506,H1HESC@0.510973,HELAS3@1.48016,HEPG2@0.470872,HMEC@0.189276,HSMM@0.045031,HUVEC@1.27327,K562@0,MCF7@16.7878,NHEK@2.42383,NHLF@0.171091,SKNSHRA@0.080694, 0 0 0 0 ENSG00000175772.10 ENST00000448359.1 chr2:111132733-111140810 2 2441 5634 intergenic 2.18 0 0,0,0 0 0,0,0 0 0 0 0 0 0 188.667759115117 131.679091231807 224.906 0 0 chimp,human,macaque,marmoset,orangutan, lincRNA processed_transcript A549@7.39427,AG04450@0.114063,BJ@0.397282,GM12878@0.127506,H1HESC@0.510973,HELAS3@1.48016,HEPG2@0.470872,HMEC@0.189276,HSMM@0.045031,HUVEC@1.27327,K562@0,MCF7@16.7878,NHEK@2.42383,NHLF@0.171091,SKNSHRA@0.080694, 66 2 0 0 ENSG00000184115.11 ENST00000488671.1 chr2:111143988-111191250 4 1524 45732 intergenic 54.18 0 0,0,0 0 0,1,0 0 1.01635616198723 0 2.60367454068241 4.96962739438468 0 366.010498687664 13.0612044082918 0 0 0 chimp,cow,dog,elephant,guinea_pig,horse,human,macaque,marmoset,orangutan,panda,pig,rabbit,rat, processed_transcript processed_transcript A549@0.01032,AG04450@0.214609,BJ@0.747122,GM12878@0,H1HESC@0.431883,HELAS3@0.0143045,HEPG2@0.10847,HMEC@0.016078,HSMM@0.117894,HUVEC@5.12961,K562@0.002193,MCF7@0.0334685,NHEK@0.016165,NHLF@0.082354,SKNSHRA@0.379601, 81 2 45 2 ENSG00000184115.11 ENST00000490013.1 chr2:111160491-111192743 5 2913 29331 intergenic 3.13 1 0,0,0 0 0,1,0 0 0.315025058811496 0 30.0418812221078 1.4841976066278 0 51.0010298661174 3.17745729773959 0 0 1 chimp,human,marmoset,orangutan, processed_transcript retained_intron A549@0.01032,AG04450@0.214609,BJ@0.747122,GM12878@0,H1HESC@0.431883,HELAS3@0.0143045,HEPG2@0.10847,HMEC@0.016078,HSMM@0.117894,HUVEC@5.12961,K562@0.002193,MCF7@0.0334685,NHEK@0.016165,NHLF@0.082354,SKNSHRA@0.379601, 60 2 0 0 ENSG00000184115.11 ENST00000498358.1 chr2:111160513-111181369 3 730 20122 intergenic 3.63 1 0,1,0 0 0,1,0 0 0.459198886790577 0 83.7808219178082 3.38435543186562 2.232 136.498630136986 6.99105456714044 2.331 0 0 cat,chimp,cow,dog,elephant,guinea_pig,horse,human,macaque,marmoset,opossum,orangutan,panda, processed_transcript processed_transcript A549@0.01032,AG04450@0.214609,BJ@0.747122,GM12878@0,H1HESC@0.431883,HELAS3@0.0143045,HEPG2@0.10847,HMEC@0.016078,HSMM@0.117894,HUVEC@5.12961,K562@0.002193,MCF7@0.0334685,NHEK@0.016165,NHLF@0.082354,SKNSHRA@0.379601, 0 0 0 0 ENSG00000184115.11 ENST00000483717.1 chr2:111160732-111192306 4 625 30943 intergenic -2.81 0 0,0,0 0 0,1,0 0 0.298613579808034 0 133.6704 1.53511294961704 0 231.0752 3.14584881879585 0 0 0 cat,chimp,cow,dog,elephant,guinea_pig,horse,human,macaque,marmoset,opossum,orangutan,panda,rabbit, processed_transcript processed_transcript A549@0.01032,AG04450@0.214609,BJ@0.747122,GM12878@0,H1HESC@0.431883,HELAS3@0.0143045,HEPG2@0.10847,HMEC@0.016078,HSMM@0.117894,HUVEC@5.12961,K562@0.002193,MCF7@0.0334685,NHEK@0.016165,NHLF@0.082354,SKNSHRA@0.379601, 0 0 0 0 ENSG00000184115.11 ENST00000489211.1 chr2:111160839-111192268 6 781 30638 intergenic 3.13 0 0,1,0 0 0,1,0 0 0.301586265422025 0 112.051216389245 1.42088256413604 0 190.225352112676 3.04190874077942 0 0 0 chimp,dog,guinea_pig,human,marmoset,orangutan,rabbit, processed_transcript processed_transcript A549@0.01032,AG04450@0.214609,BJ@0.747122,GM12878@0,H1HESC@0.431883,HELAS3@0.0143045,HEPG2@0.10847,HMEC@0.016078,HSMM@0.117894,HUVEC@5.12961,K562@0.002193,MCF7@0.0334685,NHEK@0.016165,NHLF@0.082354,SKNSHRA@0.379601, 113 2 66 2 ENSG00000184115.11 ENST00000466329.1 chr2:111163943-111165676 2 597 1134 intergenic -3.24 0 0,0,0 0 0,1,0 0 0 0 79.4388609715243 1.67548500881834 0 158.758793969849 2.84656084656085 43.725 0 0 chimp,cow,dog,elephant,horse,human,marmoset,orangutan,panda,rabbit, processed_transcript retained_intron A549@0.01032,AG04450@0.214609,BJ@0.747122,GM12878@0,H1HESC@0.431883,HELAS3@0.0143045,HEPG2@0.10847,HMEC@0.016078,HSMM@0.117894,HUVEC@5.12961,K562@0.002193,MCF7@0.0334685,NHEK@0.016165,NHLF@0.082354,SKNSHRA@0.379601, 139 2 84 2 ENSG00000184115.11 ENST00000469759.1 chr2:111164327-111191250 5 671 26244 intergenic 0.77 0 0,0,0 0 0,1,0 0 0.352080475537266 0 60.6780923994039 1.14570949550373 0 101.745156482861 2.92680231672001 0 0 0 chimp,dog,human,marmoset,orangutan,rabbit, processed_transcript processed_transcript A549@0.01032,AG04450@0.214609,BJ@0.747122,GM12878@0,H1HESC@0.431883,HELAS3@0.0143045,HEPG2@0.10847,HMEC@0.016078,HSMM@0.117894,HUVEC@5.12961,K562@0.002193,MCF7@0.0334685,NHEK@0.016165,NHLF@0.082354,SKNSHRA@0.379601, 0 0 0 0 ENSG00000227574.2 ENST00000456683.2 chr2:111206819-111208641 3 473 1345 intronic 2.70 0 0,0,0 0 0,0,0 0 0 0 10.1712473572939 29.7866171003717 0 21.6892177589852 35.3085501858736 0 0 0 chimp,cow,dog,human,macaque,marmoset,orangutan, antisense antisense A549@0,AG04450@0.0047085,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0.0575245,K562@0,MCF7@0,NHEK@0.00268167,NHLF@0,SKNSHRA@0, 162 2 0 0 ENSG00000231536.1 ENST00000458252.1 chr2:111368493-111369981 2 745 741 intergenic 0.51 0 0,0,0 0 0,0,0 0 0 0 66.6604026845638 0 293.847 88.1261744966443 0 316.888 0 0 human, antisense antisense A549@0,AG04450@0,BJ@0,GM12878@0.0445165,H1HESC@0.0320545,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0.005509,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0.010332,SKNSHRA@0, 0 0 0 0 ENSG00000235881.2 ENST00000414159.2 chr2:111467152-111474172 2 4393 2625 intergenic 2.27 0 0,0,0 0 0,0,0 0 0 0 4.47062841530055 0 0 5.75500910746812 0 0 0 0 chimp,human,macaque,orangutan, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0.0010665,H1HESC@0.007443,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0.004428,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000204581.2 ENST00000376593.2 chr2:111855922-111871762 3 3023 12813 intronic 1.86 0 0,0,1 0 0,0,0 40.3003638769434 11.874346366971 0 19.051273569302 9.62225864356513 0 19.3000330797221 8.96191368141731 0 0 0 chimp,guinea_pig,horse,human,macaque,marmoset,orangutan,panda, antisense antisense A549@0.0060975,AG04450@0.0390565,BJ@0.0127385,GM12878@0.0016325,H1HESC@0.002353,HELAS3@0.093878,HEPG2@0.184948,HMEC@0,HSMM@0.005712,HUVEC@0.0060985,K562@0.0033645,MCF7@0.210903,NHEK@0.00291433,NHLF@0.029762,SKNSHRA@0.274322, 0 0 0 0 ENSG00000204581.2 ENST00000418615.1 chr2:111870511-111873165 3 450 2200 intronic 1.99 0 0,0,0 0 0,0,0 0 0 179.08 0 0 87.047 0 0 84.773 0 0 chimp,horse,human,macaque,marmoset,orangutan,panda, antisense antisense A549@0.0060975,AG04450@0.0390565,BJ@0.0127385,GM12878@0.0016325,H1HESC@0.002353,HELAS3@0.093878,HEPG2@0.184948,HMEC@0,HSMM@0.005712,HUVEC@0.0060985,K562@0.0033645,MCF7@0.210903,NHEK@0.00291433,NHLF@0.029762,SKNSHRA@0.274322, 0 0 0 0 ENSG00000230499.1 ENST00000451230.1 chr2:111953540-111964071 2 410 10119 intergenic -1.03 0 0,0,0 0 0,0,0 0 1.05385907698389 0 0 1.54343314556774 0 0 3.15653720723392 0 0 0 chimp,human,macaque,marmoset,orangutan, lincRNA lincRNA A549@0.0376715,AG04450@0.00544,BJ@0,GM12878@0.109967,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000172965.6 ENST00000439362.1 chr2:111965353-112252625 6 1516 285746 encompassing 2.47 1 1,1,1 1 0,0,0 8.94656992084433 13.9586625884527 65.76 10.1675461741425 13.8697969525383 79.812 14.1906332453826 23.9294828274062 83.666 0 0 chimp,cow,human,macaque,marmoset,orangutan,pig, processed_transcript processed_transcript A549@17.1237,AG04450@53.1368,BJ@29.3503,GM12878@1.81053,H1HESC@4.98117,HELAS3@16.7897,HEPG2@37.8396,HMEC@21.048,HSMM@24.5008,HUVEC@78.5224,K562@32.2426,MCF7@10.2945,NHEK@24.3043,NHLF@33.5275,SKNSHRA@8.45128, 0 0 0 0 ENSG00000172965.6 ENST00000443467.1 chr2:111997401-112252625 6 820 254394 intergenic 1.62 0 0,1,0 1 0,0,0 16.540243902439 14.2102329457456 65.76 18.7975609756098 14.4417163926822 79.812 26.2353658536585 21.3123265485821 83.666 0 0 chimp,cow,horse,human,macaque,marmoset,orangutan,pig,rabbit, processed_transcript processed_transcript A549@17.1237,AG04450@53.1368,BJ@29.3503,GM12878@1.81053,H1HESC@4.98117,HELAS3@16.7897,HEPG2@37.8396,HMEC@21.048,HSMM@24.5008,HUVEC@78.5224,K562@32.2426,MCF7@10.2945,NHEK@24.3043,NHLF@33.5275,SKNSHRA@8.45128, 127 2 0 0 ENSG00000172965.6 ENST00000451884.1 chr2:112005727-112123291 3 420 117140 intergenic -5.97 0 0,0,1 0 0,0,0 0 7.75697456035513 0 0 6.90674406692846 0 5.78571428571429 12.7034488646065 0 0 0 chimp,human,macaque,marmoset,orangutan, processed_transcript processed_transcript A549@17.1237,AG04450@53.1368,BJ@29.3503,GM12878@1.81053,H1HESC@4.98117,HELAS3@16.7897,HEPG2@37.8396,HMEC@21.048,HSMM@24.5008,HUVEC@78.5224,K562@32.2426,MCF7@10.2945,NHEK@24.3043,NHLF@33.5275,SKNSHRA@8.45128, 0 0 0 0 ENSG00000229118.1 ENST00000438897.1 chr2:112022860-112037457 2 615 13980 intergenic 0.28 0 0,0,0 0 0,0,0 0 9.38469241773963 0 0 6.69935622317597 0 0 6.80729613733905 0 0 0 chimp,human,macaque,orangutan, lincRNA lincRNA A549@0,AG04450@0.004798,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0.0100045,HUVEC@0.225565,K562@0,MCF7@0,NHEK@0,NHLF@0.050212,SKNSHRA@0.004507, 0 0 0 0 ENSG00000172965.6 ENST00000432818.1 chr2:112033908-112252677 4 568 218195 intergenic 0.72 0 0,1,0 1 0,0,0 61.5052816901408 15.855734549371 44.388 66.3433098591549 16.095139668645 56.972 84.1619718309859 24.0205687573042 57.244 0 0 cat,chimp,cow,dog,elephant,guinea_pig,horse,human,macaque,marmoset,orangutan,pig,rabbit,rat, processed_transcript processed_transcript A549@17.1237,AG04450@53.1368,BJ@29.3503,GM12878@1.81053,H1HESC@4.98117,HELAS3@16.7897,HEPG2@37.8396,HMEC@21.048,HSMM@24.5008,HUVEC@78.5224,K562@32.2426,MCF7@10.2945,NHEK@24.3043,NHLF@33.5275,SKNSHRA@8.45128, 0 0 89 2 ENSG00000172965.6 ENST00000444301.1 chr2:112071889-112252610 4 662 180053 intergenic 4.43 0 0,1,1 1 0,0,0 11.1752265861027 18.2576907910449 71.925 17.3323262839879 18.1105007969876 83.358 22.2779456193353 24.8517714228588 90.431 0 0 chimp,horse,human,macaque,marmoset,orangutan,pig,rabbit, processed_transcript processed_transcript A549@17.1237,AG04450@53.1368,BJ@29.3503,GM12878@1.81053,H1HESC@4.98117,HELAS3@16.7897,HEPG2@37.8396,HMEC@21.048,HSMM@24.5008,HUVEC@78.5224,K562@32.2426,MCF7@10.2945,NHEK@24.3043,NHLF@33.5275,SKNSHRA@8.45128, 0 0 0 0 ENSG00000172965.6 ENST00000453478.1 chr2:112101668-112252631 4 556 150401 intergenic 0.72 0 0,1,0 1 0,0,0 28.8291366906475 20.3126176022766 63.294 27.7230215827338 20.2617469298741 79.812 39.1888489208633 28.1905572436354 80.96 0 0 cat,chimp,cow,dog,human,macaque,marmoset,mouse,orangutan,rabbit, processed_transcript processed_transcript A549@17.1237,AG04450@53.1368,BJ@29.3503,GM12878@1.81053,H1HESC@4.98117,HELAS3@16.7897,HEPG2@37.8396,HMEC@21.048,HSMM@24.5008,HUVEC@78.5224,K562@32.2426,MCF7@10.2945,NHEK@24.3043,NHLF@33.5275,SKNSHRA@8.45128, 0 0 0 0 ENSG00000172965.6 ENST00000409569.2 chr2:112186886-112252663 2 512 65263 intergenic 7.33 1 0,1,1 1 0,0,0 147.521484375 26.2514441567197 50.142 171.8203125 21.6060401759037 64.966 170.271484375 22.814397131606 65.392 0 0 chimp,cow,dog,elephant,horse,human,macaque,marmoset,mouse,orangutan,panda,pig,rabbit,rat, processed_transcript processed_transcript A549@17.1237,AG04450@53.1368,BJ@29.3503,GM12878@1.81053,H1HESC@4.98117,HELAS3@16.7897,HEPG2@37.8396,HMEC@21.048,HSMM@24.5008,HUVEC@78.5224,K562@32.2426,MCF7@10.2945,NHEK@24.3043,NHLF@33.5275,SKNSHRA@8.45128, 0 0 0 0 ENSG00000172965.6 ENST00000419736.1 chr2:112186889-112252628 4 773 64960 intergenic 7.33 1 0,1,1 1 0,0,0 79.1021992238034 26.3738916256158 64.527 95.3389391979301 21.7068195812808 79.812 91.0595084087969 22.9208128078818 82.313 0 0 chimp,dog,horse,human,macaque,marmoset,orangutan,panda,pig, processed_transcript processed_transcript A549@17.1237,AG04450@53.1368,BJ@29.3503,GM12878@1.81053,H1HESC@4.98117,HELAS3@16.7897,HEPG2@37.8396,HMEC@21.048,HSMM@24.5008,HUVEC@78.5224,K562@32.2426,MCF7@10.2945,NHEK@24.3043,NHLF@33.5275,SKNSHRA@8.45128, 116 2 69 2 ENSG00000172965.6 ENST00000433198.2 chr2:112186891-112199198 2 419 11886 intergenic 7.33 1 0,0,1 0 0,0,0 110.620525059666 81.2704021537944 0 139.100238663484 73.9776207302709 3.036 119.219570405728 77.1121487464244 3.058 0 0 chimp,cow,dog,elephant,guinea_pig,horse,human,macaque,marmoset,mouse,opossum,orangutan,panda,pig,rabbit,rat, processed_transcript processed_transcript A549@17.1237,AG04450@53.1368,BJ@29.3503,GM12878@1.81053,H1HESC@4.98117,HELAS3@16.7897,HEPG2@37.8396,HMEC@21.048,HSMM@24.5008,HUVEC@78.5224,K562@32.2426,MCF7@10.2945,NHEK@24.3043,NHLF@33.5275,SKNSHRA@8.45128, 0 0 0 0 ENSG00000172965.6 ENST00000424851.2 chr2:112186891-112252611 4 763 64951 intergenic 7.33 1 0,1,1 1 0,0,0 70.9816513761468 26.3775461501748 71.514 91.9410222804718 21.709827408354 82.964 82.2044560943643 22.9239888531354 89.98 0 0 chimp,horse,human,macaque,marmoset,pig, processed_transcript processed_transcript A549@17.1237,AG04450@53.1368,BJ@29.3503,GM12878@1.81053,H1HESC@4.98117,HELAS3@16.7897,HEPG2@37.8396,HMEC@21.048,HSMM@24.5008,HUVEC@78.5224,K562@32.2426,MCF7@10.2945,NHEK@24.3043,NHLF@33.5275,SKNSHRA@8.45128, 0 0 0 0 ENSG00000172965.6 ENST00000308604.5 chr2:112186896-112252565 3 549 65116 intergenic 7.33 1 0,1,1 1 0,0,0 84.4262295081967 26.3107070458873 79.734 114.861566484517 21.6548160206401 90.45 98.6393442622951 22.8659008538608 99 0 0 chimp,cow,dog,horse,human,macaque,marmoset,orangutan,panda,pig,rat, processed_transcript processed_transcript A549@17.1237,AG04450@53.1368,BJ@29.3503,GM12878@1.81053,H1HESC@4.98117,HELAS3@16.7897,HEPG2@37.8396,HMEC@21.048,HSMM@24.5008,HUVEC@78.5224,K562@32.2426,MCF7@10.2945,NHEK@24.3043,NHLF@33.5275,SKNSHRA@8.45128, 0 0 0 0 ENSG00000172965.6 ENST00000442293.1 chr2:112186900-112237838 3 543 50391 intergenic 7.33 1 1,1,1 0 0,0,0 85.3591160220994 30.9239348296323 0 107.335174953959 25.7539044670675 0 91.9944751381215 27.1832866980215 0 0 0 horse,human,macaque,marmoset,orangutan,rat, processed_transcript processed_transcript A549@17.1237,AG04450@53.1368,BJ@29.3503,GM12878@1.81053,H1HESC@4.98117,HELAS3@16.7897,HEPG2@37.8396,HMEC@21.048,HSMM@24.5008,HUVEC@78.5224,K562@32.2426,MCF7@10.2945,NHEK@24.3043,NHLF@33.5275,SKNSHRA@8.45128, 0 0 0 0 ENSG00000172965.6 ENST00000441075.1 chr2:112187020-112252602 3 701 64877 intergenic 0.72 0 0,1,0 1 0,0,0 71.9828815977175 26.407632905344 75.213 92.0784593437946 21.734590070441 86.51 80.5991440798859 22.9501364119796 94.039 0 0 chimp,cow,guinea_pig,human,macaque,marmoset,pig, processed_transcript processed_transcript A549@17.1237,AG04450@53.1368,BJ@29.3503,GM12878@1.81053,H1HESC@4.98117,HELAS3@16.7897,HEPG2@37.8396,HMEC@21.048,HSMM@24.5008,HUVEC@78.5224,K562@32.2426,MCF7@10.2945,NHEK@24.3043,NHLF@33.5275,SKNSHRA@8.45128, 0 0 74 2 ENSG00000172965.6 ENST00000424617.1 chr2:112227095-112237838 3 715 10024 intergenic -1.30 0 0,1,0 0 0,0,0 0 23.2715482841181 0 0 14.1730845969673 0 0 15.8782920989625 0 0 0 chimp,horse,human,macaque,marmoset, processed_transcript retained_intron A549@17.1237,AG04450@53.1368,BJ@29.3503,GM12878@1.81053,H1HESC@4.98117,HELAS3@16.7897,HEPG2@37.8396,HMEC@21.048,HSMM@24.5008,HUVEC@78.5224,K562@32.2426,MCF7@10.2945,NHEK@24.3043,NHLF@33.5275,SKNSHRA@8.45128, 0 0 73 2 ENSG00000172965.6 ENST00000439494.1 chr2:112227215-112237838 4 703 9914 intergenic -1.30 0 0,1,0 0 0,0,0 0 23.5297559007464 0 0 14.3303409320153 0 0 16.054468428485 0 0 0 chimp,human,macaque,marmoset, processed_transcript processed_transcript A549@17.1237,AG04450@53.1368,BJ@29.3503,GM12878@1.81053,H1HESC@4.98117,HELAS3@16.7897,HEPG2@37.8396,HMEC@21.048,HSMM@24.5008,HUVEC@78.5224,K562@32.2426,MCF7@10.2945,NHEK@24.3043,NHLF@33.5275,SKNSHRA@8.45128, 0 0 0 0 ENSG00000240350.1 ENST00000455309.1 chr2:112248850-112268567 2 755 18960 intergenic 5.29 0 0,0,0 0 0,0,0 0 12.7913502109705 11.44 0 11.1291139240506 0 0 11.7967299578059 0 0 0 cow,horse,human,orangutan,panda, lincRNA lincRNA A549@0.101306,AG04450@2.99248,BJ@0.565709,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0.246814,HUVEC@0.711835,K562@0.010318,MCF7@0,NHEK@0.0199827,NHLF@1.52385,SKNSHRA@1.75699, 0 0 0 0 ENSG00000224959.1 ENST00000432268.1 chr2:112249520-112252388 2 879 1987 intergenic -2.53 0 0,1,1 0 0,0,0 0 72.2294916960242 79.734 2.53924914675768 42.3648716658279 98.41 0 44.2174131857071 109.34 0 0 chimp,elephant,human,macaque,marmoset,orangutan,pig, lincRNA processed_transcript A549@11.0526,AG04450@10.0959,BJ@7.7702,GM12878@0.282002,H1HESC@0.597154,HELAS3@4.72523,HEPG2@8.93934,HMEC@0.744191,HSMM@2.13822,HUVEC@40.5924,K562@5.9567,MCF7@1.91961,NHEK@1.44532,NHLF@3.73973,SKNSHRA@1.81819, 0 0 0 0 ENSG00000225744.1 ENST00000426124.1 chr2:112365418-112370095 2 790 3885 intergenic -2.71 0 0,0,0 0 0,0,0 0 0 0 0 0.984298584298584 0 0 1.67979407979408 0 0 0 chimp,human,macaque,marmoset,orangutan, lincRNA lincRNA A549@0,AG04450@0,BJ@0.006111,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0.0051285,SKNSHRA@0, 0 0 0 0 ENSG00000228251.1 ENST00000436885.1 chr2:113348373-113349516 2 527 614 intergenic -1.76 0 0,0,1 0 0,0,0 0 0 0 0 0 0 0 0 19.584 0 0 chimp,human,macaque,orangutan, lincRNA lincRNA A549@0.069677,AG04450@0.0253565,BJ@0.0717965,GM12878@0.0576845,H1HESC@0.130653,HELAS3@0.198985,HEPG2@0.487443,HMEC@0.02236,HSMM@0.174851,HUVEC@0.0536795,K562@0.069627,MCF7@0.011774,NHEK@0.064688,NHLF@0.0087745,SKNSHRA@0.134322, 0 0 0 0 ENSG00000237753.1 ENST00000457336.1 chr2:113399409-113403267 5 2017 1833 intergenic 7.11 0 1,1,1 0 0,0,0 40.2825979176996 5.52100381887616 84.686 24.1021318790283 2.37643207855974 93.226 26.5557759048091 4.0671031096563 94.354 0 0 chimp,cow,dog,horse,human,macaque,marmoset,orangutan,panda,pig, lincRNA processed_transcript A549@0.510205,AG04450@0.262956,BJ@0.245245,GM12878@0.312303,H1HESC@0.309453,HELAS3@0.503407,HEPG2@0.449279,HMEC@0.610918,HSMM@0.289855,HUVEC@0.281239,K562@0.494457,MCF7@0.28783,NHEK@0.137246,NHLF@0.332439,SKNSHRA@0.530914, 0 0 0 0 ENSG00000234174.1 ENST00000446590.1 chr2:113929112-113932914 2 557 3243 intronic 1.83 0 0,1,0 0 0,0,0 0 0 0 0 10.013567684243 4.942 0 8.67930928152945 6.723 0 0 chimp,human,macaque,marmoset,orangutan, antisense antisense A549@0,AG04450@0,BJ@0,GM12878@1.02182,H1HESC@0,HELAS3@0.007467,HEPG2@0.0308955,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000234174.1 ENST00000438409.1 chr2:113931180-113932937 2 581 1174 exonic -0.99 0 0,1,1 0 0,0,0 0 0 0 55.8932874354561 0 4.942 48.4457831325301 0 6.723 0 0 cat,chimp,cow,dog,elephant,guinea_pig,horse,human,macaque,marmoset,orangutan,panda,rabbit,rat, antisense antisense A549@0,AG04450@0,BJ@0,GM12878@1.02182,H1HESC@0,HELAS3@0.007467,HEPG2@0.0308955,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000189223.6 ENST00000456685.1 chr2:113969099-113997267 6 1201 26957 exonic -2.65 0 0,1,0 0 0,0,0 18.9159034138218 49.8610750454427 0 18.188176519567 48.0337574655934 2.55 12.1448792672773 52.5578513929592 2.84 0 0 chimp,human,macaque,marmoset,orangutan, lincRNA processed_transcript A549@1.03367,AG04450@9.73851,BJ@13.5358,GM12878@7.13433,H1HESC@0.0715175,HELAS3@0.598571,HEPG2@0.298237,HMEC@0.235042,HSMM@13.0079,HUVEC@9.36802,K562@11.4698,MCF7@15.7751,NHEK@10.4039,NHLF@3.24539,SKNSHRA@0.014607, 0 0 0 0 ENSG00000189223.6 ENST00000437551.1 chr2:113993104-113998402 3 1901 3393 exonic 8.74 0 1,1,1 1 0,0,0 12.9836927932667 40.8785735337459 88.97 31.4965807469753 44.8859416445623 124.592 31.0873224618622 89.4099616858238 120.196 0 0 chimp,dog,human,macaque,marmoset,orangutan, lincRNA processed_transcript A549@1.03367,AG04450@9.73851,BJ@13.5358,GM12878@7.13433,H1HESC@0.0715175,HELAS3@0.598571,HEPG2@0.298237,HMEC@0.235042,HSMM@13.0079,HUVEC@9.36802,K562@11.4698,MCF7@15.7751,NHEK@10.4039,NHLF@3.24539,SKNSHRA@0.014607, 0 0 0 0 ENSG00000189223.6 ENST00000451179.1 chr2:113993107-114023747 5 1191 29441 exonic 2.82 0 0,1,0 1 0,0,0 19.2779177162049 28.4719608708943 90.692 24.416456759026 36.4876872388846 126.773 25.0545759865659 44.8325464488298 122.434 0 0 chimp,dog,elephant,horse,human,macaque,marmoset,orangutan,panda, lincRNA processed_transcript A549@1.03367,AG04450@9.73851,BJ@13.5358,GM12878@7.13433,H1HESC@0.0715175,HELAS3@0.598571,HEPG2@0.298237,HMEC@0.235042,HSMM@13.0079,HUVEC@9.36802,K562@11.4698,MCF7@15.7751,NHEK@10.4039,NHLF@3.24539,SKNSHRA@0.014607, 0 0 0 0 ENSG00000189223.6 ENST00000422956.1 chr2:113993113-114024587 5 2223 29243 exonic 4.01 1 1,1,1 1 0,0,0 8.7791273054431 28.6647402797251 94.136 11.119208277103 36.7347399377629 131.135 11.4098065677013 45.1361009472352 126.91 0 0 chimp,dog,horse,human,macaque,marmoset,orangutan,panda, lincRNA processed_transcript A549@1.03367,AG04450@9.73851,BJ@13.5358,GM12878@7.13433,H1HESC@0.0715175,HELAS3@0.598571,HEPG2@0.298237,HMEC@0.235042,HSMM@13.0079,HUVEC@9.36802,K562@11.4698,MCF7@15.7751,NHEK@10.4039,NHLF@3.24539,SKNSHRA@0.014607, 0 0 0 0 ENSG00000189223.6 ENST00000431844.1 chr2:113993117-113993921 2 582 220 exonic 1.08 0 0,1,0 1 0,0,0 29.5876288659794 143.5 96.432 37.4742268041237 236.704545454545 134.043 300.56529209622 246.754545454545 129.894 0 0 cat,dog,horse,human,macaque,marmoset,opossum,orangutan,rabbit, lincRNA processed_transcript A549@1.03367,AG04450@9.73851,BJ@13.5358,GM12878@7.13433,H1HESC@0.0715175,HELAS3@0.598571,HEPG2@0.298237,HMEC@0.235042,HSMM@13.0079,HUVEC@9.36802,K562@11.4698,MCF7@15.7751,NHEK@10.4039,NHLF@3.24539,SKNSHRA@0.014607, 0 0 0 0 ENSG00000189223.6 ENST00000333145.5 chr2:113993117-114024581 6 2313 29141 exonic 4.01 1 1,1,1 1 0,0,0 9.77604842196282 28.5684774029718 96.432 12.1387808041505 36.6301774132665 134.043 12.4742758322525 45.0570330462235 129.894 0 0 chimp,dog,horse,human,macaque,marmoset,orangutan,panda, lincRNA processed_transcript A549@1.03367,AG04450@9.73851,BJ@13.5358,GM12878@7.13433,H1HESC@0.0715175,HELAS3@0.598571,HEPG2@0.298237,HMEC@0.235042,HSMM@13.0079,HUVEC@9.36802,K562@11.4698,MCF7@15.7751,NHEK@10.4039,NHLF@3.24539,SKNSHRA@0.014607, 0 0 0 0 ENSG00000189223.6 ENST00000445745.1 chr2:113993814-114024587 5 2565 28200 exonic 4.01 1 0,1,1 0 0,0,0 2.10214424951267 28.4022695035461 146.37 2.44327485380117 36.0058510638298 209.382 15.0896686159844 39.0098226950355 334.021 0 0 dog,horse,human,macaque,marmoset,orangutan,panda, lincRNA processed_transcript A549@1.03367,AG04450@9.73851,BJ@13.5358,GM12878@7.13433,H1HESC@0.0715175,HELAS3@0.598571,HEPG2@0.298237,HMEC@0.235042,HSMM@13.0079,HUVEC@9.36802,K562@11.4698,MCF7@15.7751,NHEK@10.4039,NHLF@3.24539,SKNSHRA@0.014607, 0 0 0 0 ENSG00000189223.6 ENST00000436293.2 chr2:113993846-114024587 6 2681 28050 exonic 4.01 1 0,1,1 0 0,0,0 3.14248414770608 28.4460249554367 146.37 4.10667661320403 36.0293048128342 209.382 10.609474076837 39.0788591800357 348.197 0 0 dog,horse,human,macaque,marmoset,orangutan,panda, lincRNA processed_transcript A549@1.03367,AG04450@9.73851,BJ@13.5358,GM12878@7.13433,H1HESC@0.0715175,HELAS3@0.598571,HEPG2@0.298237,HMEC@0.235042,HSMM@13.0079,HUVEC@9.36802,K562@11.4698,MCF7@15.7751,NHEK@10.4039,NHLF@3.24539,SKNSHRA@0.014607, 0 0 0 0 ENSG00000189223.6 ENST00000510859.1 chr2:114008343-114024550 5 2308 13891 intronic 4.01 1 0,1,1 0 0,0,0 0 22.6442300770283 0 0 24.5543877330646 0 0 26.5265279677489 0 0 0 chimp,dog,horse,human,macaque,marmoset,orangutan,panda, lincRNA processed_transcript A549@1.03367,AG04450@9.73851,BJ@13.5358,GM12878@7.13433,H1HESC@0.0715175,HELAS3@0.598571,HEPG2@0.298237,HMEC@0.235042,HSMM@13.0079,HUVEC@9.36802,K562@11.4698,MCF7@15.7751,NHEK@10.4039,NHLF@3.24539,SKNSHRA@0.014607, 0 0 0 0 ENSG00000234997.1 ENST00000422178.1 chr2:114182072-114182901 2 506 321 intergenic -7.65 0 0,0,0 0 0,0,0 0 0 0 17.1541501976285 0 2.868 18.8142292490119 0 3.012 0 0 chimp,cow,dog,guinea_pig,horse,human,macaque,marmoset,orangutan,panda,pig, antisense antisense A549@1.60008,AG04450@0.0478475,BJ@0.0663935,GM12878@0.038944,H1HESC@0.0867635,HELAS3@0.0293225,HEPG2@0.077838,HMEC@0.096723,HSMM@0.122385,HUVEC@0,K562@0,MCF7@0.0479405,NHEK@1.15676,NHLF@0,SKNSHRA@0.0288285, 0 0 0 0 ENSG00000234148.2 ENST00000449954.1 chr2:114270040-114273062 3 742 2276 intergenic -4.52 0 0,0,0 0 0,0,0 0 0 0 0 0 0 0 4.52152899824253 0 0 0 chimp,human, lincRNA lincRNA A549@0,AG04450@0,BJ@0.03842,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0.068649,MCF7@0.0123615,NHEK@0,NHLF@0,SKNSHRA@0, 45 3 0 0 ENSG00000231943.2 ENST00000416758.1 chr2:114285145-114300249 3 401 14699 intergenic 2.69 0 0,1,0 0 0,0,0 0 0 0 16.3965087281796 20.8897203891421 0 17.3316708229426 28.0411592625349 9.589 0 0 chimp,human,macaque,marmoset,orangutan, lincRNA processed_transcript A549@0.004042,AG04450@0.503099,BJ@0.099061,GM12878@0.0152345,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0.0551255,HUVEC@0.0090555,K562@0.038539,MCF7@0,NHEK@0.00475433,NHLF@4.59219,SKNSHRA@0.030216, 0 0 0 0 ENSG00000231943.2 ENST00000446595.1 chr2:114286224-114300213 3 736 13249 intergenic 2.69 0 0,1,0 0 0,0,0 0 0 0 87.2690217391304 18.3280247565854 0 84.585597826087 26.4112008453468 9.589 0 0 chimp,cow,dog,elephant,horse,human,macaque,marmoset,mouse,orangutan,panda, lincRNA processed_transcript A549@0.004042,AG04450@0.503099,BJ@0.099061,GM12878@0.0152345,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0.0551255,HUVEC@0.0090555,K562@0.038539,MCF7@0,NHEK@0.00475433,NHLF@4.59219,SKNSHRA@0.030216, 0 0 0 0 ENSG00000231943.2 ENST00000416105.1 chr2:114286497-114300235 4 641 13091 intergenic 2.69 0 0,1,0 0 0,0,0 0 0 0 47.8065522620905 18.5492322969979 0 49.1560062402496 26.7299671530059 9.589 0 0 chimp,dog,elephant,guinea_pig,human,macaque,marmoset,orangutan, lincRNA processed_transcript A549@0.004042,AG04450@0.503099,BJ@0.099061,GM12878@0.0152345,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0.0551255,HUVEC@0.0090555,K562@0.038539,MCF7@0,NHEK@0.00475433,NHLF@4.59219,SKNSHRA@0.030216, 0 0 0 0 ENSG00000231943.2 ENST00000450636.1 chr2:114297629-114300242 2 535 2076 intergenic -0.94 0 0,1,1 0 0,0,0 0 0 0 0 103.118015414258 0 0 132.679190751445 9.589 0 0 chimp,human,macaque,marmoset,rabbit, lincRNA processed_transcript A549@0.004042,AG04450@0.503099,BJ@0.099061,GM12878@0.0152345,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0.0551255,HUVEC@0.0090555,K562@0.038539,MCF7@0,NHEK@0.00475433,NHLF@4.59219,SKNSHRA@0.030216, 0 0 0 0 ENSG00000231943.2 ENST00000433106.2 chr2:114297633-114300242 3 587 2018 intergenic -0.26 0 0,1,1 0 0,0,0 0 0 0 0 106.081764122894 0 0 136.492566897919 9.589 0 0 chimp,human,macaque,marmoset,rabbit, lincRNA processed_transcript A549@0.004042,AG04450@0.503099,BJ@0.099061,GM12878@0.0152345,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0.0551255,HUVEC@0.0090555,K562@0.038539,MCF7@0,NHEK@0.00475433,NHLF@4.59219,SKNSHRA@0.030216, 12 5 17 4 ENSG00000226516.2 ENST00000432583.1 chr2:114334959-114336486 3 1090 433 intergenic 5.18 1 0,0,0 0 0,0,0 0 0 0 0 0 33.384 0 0 35.257 0 0 chimp,human,macaque,orangutan, lincRNA lincRNA A549@0.015688,AG04450@0.266238,BJ@0.180696,GM12878@0.015286,H1HESC@0.367865,HELAS3@0.015673,HEPG2@0.105366,HMEC@0.004987,HSMM@0,HUVEC@0.0131725,K562@1.12445,MCF7@0.0061835,NHEK@0.027558,NHLF@0.087823,SKNSHRA@0.021225, 37 3 0 0 ENSG00000226516.2 ENST00000446648.1 chr2:114335192-114336353 3 818 339 intergenic 3.95 1 0,0,1 0 0,0,0 0 0 0 0 0 33.384 0 0 35.257 0 0 cat,chimp,human,macaque,orangutan, lincRNA lincRNA A549@0.015688,AG04450@0.266238,BJ@0.180696,GM12878@0.015286,H1HESC@0.367865,HELAS3@0.015673,HEPG2@0.105366,HMEC@0.004987,HSMM@0,HUVEC@0.0131725,K562@1.12445,MCF7@0.0061835,NHEK@0.027558,NHLF@0.087823,SKNSHRA@0.021225, 0 0 0 0 ENSG00000233479.1 ENST00000439382.1 chr2:114426743-114430768 4 603 3416 intergenic -8.03 0 0,1,0 0 0,0,0 0 0 42.148 0 1.77166276346604 52.453 0 1.79654566744731 68.395 0 0 cat,chimp,elephant,horse,human,macaque,marmoset,orangutan, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000227359.1 ENST00000424612.1 chr2:114435279-114461655 3 558 25814 intergenic 1.99 0 0,0,0 0 0,0,0 0 0.400557836832726 0 0 3.47819012938715 0 0 4.09169442937941 0 0 0 chimp,human,macaque,orangutan,panda, lincRNA lincRNA A549@0.251495,AG04450@0.132547,BJ@0.240028,GM12878@0.124733,H1HESC@0.0052975,HELAS3@0.310306,HEPG2@0.500038,HMEC@0.153275,HSMM@0.239182,HUVEC@0.2442,K562@0.194194,MCF7@0.11932,NHEK@0.474442,NHLF@0.131278,SKNSHRA@0.27254, 0 0 0 0 ENSG00000244063.1 ENST00000435407.1 chr2:114586967-114588696 2 414 1313 intergenic -4.34 0 0,1,1 0 0,0,0 0 0 8.36 0 4.36862147753237 9.125 0 15.0883472962681 9.225 0 0 cat,chimp,cow,dog,elephant,horse,human,macaque,marmoset,orangutan,panda,pig, lincRNA lincRNA A549@0,AG04450@0.0205155,BJ@0.0338295,GM12878@0.943314,H1HESC@0,HELAS3@0.0157645,HEPG2@0.005043,HMEC@0,HSMM@0,HUVEC@0,K562@0.032573,MCF7@0,NHEK@0.015727,NHLF@0,SKNSHRA@0.050665, 0 0 0 0 ENSG00000228857.2 ENST00000420579.1 chr2:114588626-114589304 2 576 100 intergenic -4.92 0 0,0,1 0 0,0,0 14.5138888888889 0 0 15.8420138888889 0 0 16.015625 0 0 0 0 chimp,cow,elephant,horse,human,macaque,marmoset,orangutan, lincRNA lincRNA A549@0.083323,AG04450@0.080573,BJ@0.230372,GM12878@1.90344,H1HESC@0.003589,HELAS3@0.117974,HEPG2@0.0858535,HMEC@0,HSMM@0.020526,HUVEC@0.005149,K562@0.102134,MCF7@0.06927,NHEK@0.0564043,NHLF@0.083008,SKNSHRA@0.0895995, 0 0 0 0 ENSG00000228857.2 ENST00000446401.1 chr2:114588765-114600933 3 387 11777 intergenic -4.92 0 0,0,1 0 0,0,0 21.6020671834625 6.99320709858198 0 26.6795865633075 2.91211683790439 40.734 26.937984496124 3.21270272565169 57.687 0 0 chimp,cow,dog,elephant,guinea_pig,horse,human,macaque,marmoset,mouse,orangutan,pig,rabbit,rat, lincRNA lincRNA A549@0.083323,AG04450@0.080573,BJ@0.230372,GM12878@1.90344,H1HESC@0.003589,HELAS3@0.117974,HEPG2@0.0858535,HMEC@0,HSMM@0.020526,HUVEC@0.005149,K562@0.102134,MCF7@0.06927,NHEK@0.0564043,NHLF@0.083008,SKNSHRA@0.0895995, 0 0 0 0 ENSG00000234199.2 ENST00000412690.1 chr2:114737146-114764879 2 842 26889 intergenic 0.29 0 0,0,1 0 0,0,0 0 21.887574844732 0 4.12351543942993 12.2753542340734 0 4.17339667458432 13.6938153148127 0 0 0 human,macaque,orangutan, lincRNA lincRNA A549@0.092104,AG04450@0.018079,BJ@0.0806165,GM12878@0.010187,H1HESC@0.026387,HELAS3@0.222067,HEPG2@0.452711,HMEC@0,HSMM@0.005662,HUVEC@0.094302,K562@0,MCF7@0.0109115,NHEK@0.0495293,NHLF@0.0084335,SKNSHRA@0.018538, 0 0 0 0 ENSG00000243179.1 ENST00000420161.1 chr2:114737486-114740835 2 813 2534 intergenic 4.09 0 0,0,0 0 0,0,0 0 0 0 0 0 3.472 0 0 3.514 0 0 chimp,human,macaque,marmoset,orangutan, lincRNA lincRNA A549@0.334985,AG04450@0.269269,BJ@0.934305,GM12878@0.199953,H1HESC@0.0328175,HELAS3@0.715414,HEPG2@0.846167,HMEC@0,HSMM@0.144318,HUVEC@0.716652,K562@0.067055,MCF7@0.017324,NHEK@0.694671,NHLF@0.108283,SKNSHRA@0.317948, 0 0 0 0 ENSG00000235242.1 ENST00000450325.1 chr2:114879851-114880870 2 463 554 intergenic 4.64 0 0,0,0 0 0,0,0 0 0 0 99.9092872570194 4.31407942238267 1.84 75.2980561555076 4.07761732851986 1.944 0 0 cat,chimp,cow,dog,elephant,guinea_pig,horse,human,macaque,orangutan,panda,pig, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000231538.1 ENST00000417844.1 chr2:115586009-115591125 2 663 4451 intronic -4.26 1 0,0,0 0 0,0,0 0 0 0 0 4.18400359469782 0 0 5.04313637384857 71.008 0 0 chimp,elephant,horse,human,macaque,marmoset,orangutan,pig,rabbit, antisense antisense A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000235717.1 ENST00000446992.1 chr2:115591407-115593165 2 622 1134 intronic -7.97 0 0,0,1 0 0,0,0 0 0 0 0 0 5.484 0 62.6172839506173 5.766 0 0 cat,chimp,cow,dog,guinea_pig,horse,human,macaque,marmoset,orangutan,panda,pig, antisense antisense A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000235026.1 ENST00000448663.1 chr2:115888512-115918768 5 639 29609 intronic -0.34 0 0,1,0 0 0,0,0 0 15.7111689013476 71.595 0 16.737714883988 203.359 0 17.3872808943227 185.753 0 0 chimp,human,macaque,marmoset,orangutan, antisense antisense A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0.22875,HELAS3@0,HEPG2@0.0558245,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0.00180433,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000235026.1 ENST00000432658.1 chr2:115901625-115918920 3 727 16564 intronic -0.34 1 1,1,1 0 0,0,0 0 10.0934556870321 71.595 8.46492434662999 9.53103115189568 241.241 8.62861072902338 9.43473798599372 219.91 0 0 guinea_pig,human,macaque,marmoset, antisense antisense A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0.22875,HELAS3@0,HEPG2@0.0558245,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0.00180433,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000238207.1 ENST00000457110.1 chr2:118515139-118561750 4 588 46017 intergenic 6.94 0 0,0,1 0 0,0,0 35.4234693877551 10.1594845383228 0 22.2891156462585 8.50272725297173 0 23.5102040816327 10.1756959384575 0 0 0 chimp,dog,elephant,horse,human,macaque,marmoset,orangutan,panda, antisense antisense A549@0.007333,AG04450@0.0079565,BJ@0.0614835,GM12878@0,H1HESC@0.0984035,HELAS3@0,HEPG2@0,HMEC@0.013833,HSMM@0.0034755,HUVEC@0,K562@0,MCF7@0.013738,NHEK@0.00431267,NHLF@0.0721075,SKNSHRA@0, 0 0 0 0 ENSG00000236255.1 ENST00000420330.1 chr2:118591513-118599234 2 3088 4631 intergenic 3.74 1 0,0,1 0 0,0,0 0 0 0 0 3.50248326495357 1.673 0.708225388601036 3.59814294968689 1.701 0 0 chimp,human,orangutan, lincRNA lincRNA A549@1.03898,AG04450@0.291024,BJ@0.542806,GM12878@2.5752,H1HESC@0.58262,HELAS3@0.899332,HEPG2@2.66434,HMEC@0.130502,HSMM@0.088445,HUVEC@0.311646,K562@1.90633,MCF7@0.155759,NHEK@0.626611,NHLF@0.1882,SKNSHRA@1.58455, 0 0 0 0 ENSG00000236255.1 ENST00000439955.1 chr2:118593926-118595780 3 965 885 intergenic 2.85 0 0,1,0 0 0,0,0 0 0 0 0 8.8135593220339 3.708 0 9.07796610169492 3.708 0 0 chimp,horse,human,macaque,orangutan, lincRNA lincRNA A549@1.03898,AG04450@0.291024,BJ@0.542806,GM12878@2.5752,H1HESC@0.58262,HELAS3@0.899332,HEPG2@2.66434,HMEC@0.130502,HSMM@0.088445,HUVEC@0.311646,K562@1.90633,MCF7@0.155759,NHEK@0.626611,NHLF@0.1882,SKNSHRA@1.58455, 0 0 0 0 ENSG00000236255.1 ENST00000445332.1 chr2:118595320-118596965 2 422 1221 intergenic 0.57 0 0,1,0 0 0,0,0 0 0 0 0 3.85913185913186 7.8 0 4.03030303030303 8.034 0 0 chimp,human,macaque,orangutan, lincRNA lincRNA A549@1.03898,AG04450@0.291024,BJ@0.542806,GM12878@2.5752,H1HESC@0.58262,HELAS3@0.899332,HEPG2@2.66434,HMEC@0.130502,HSMM@0.088445,HUVEC@0.311646,K562@1.90633,MCF7@0.155759,NHEK@0.626611,NHLF@0.1882,SKNSHRA@1.58455, 0 0 0 0 ENSG00000235066.1 ENST00000413179.1 chr2:118753186-118754186 2 443 555 exonic -2.08 0 0,0,0 0 0,0,0 26.9051918735892 65.1675675675676 19.89 20.568848758465 75.9765765765766 24.84 22.0654627539503 89.9117117117117 26.538 0 0 chimp,cow,horse,human,macaque,marmoset,orangutan,pig,rabbit, antisense antisense A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0.0122595,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000226856.1 ENST00000414886.1 chr2:118889704-118943962 4 774 53478 intergenic 6.53 0 0,1,0 1 0,0,0 230.581395348837 31.5436441153372 0 263.843669250646 37.1210217285613 0 276.14857881137 37.5110886719773 0 0 0 chimp,cow,human,macaque,marmoset,mouse,orangutan, lincRNA lincRNA A549@0.0568565,AG04450@0.0117895,BJ@0.012517,GM12878@0.0155995,H1HESC@0.122597,HELAS3@0,HEPG2@0.0027965,HMEC@0.021179,HSMM@1.63128,HUVEC@0.0135155,K562@0,MCF7@0.0642625,NHEK@0.00982133,NHLF@0.010055,SKNSHRA@0.013116, 0 0 0 0 ENSG00000226856.1 ENST00000449075.1 chr2:118940515-118943949 3 577 2853 intergenic 6.53 0 1,1,1 1 0,0,0 540.655112651646 177.670171749036 0 635.852686308492 190.361023484052 0 658.660311958406 181.22818086225 0 0 0 chimp,cow,dog,elephant,horse,human,macaque,marmoset,mouse,opossum,orangutan,panda,pig,rabbit,rat, lincRNA lincRNA A549@0.0568565,AG04450@0.0117895,BJ@0.012517,GM12878@0.0155995,H1HESC@0.122597,HELAS3@0,HEPG2@0.0027965,HMEC@0.021179,HSMM@1.63128,HUVEC@0.0135155,K562@0,MCF7@0.0642625,NHEK@0.00982133,NHLF@0.010055,SKNSHRA@0.013116, 0 0 0 0 ENSG00000226856.1 ENST00000449819.1 chr2:118940597-118943962 2 456 2907 intergenic 6.53 0 0,1,0 1 0,0,0 497.618421052632 183.249054007568 0 573.616228070175 198.992088063295 0 597.396929824561 190.270381836945 0 0 0 chimp,cow,elephant,horse,human,macaque,marmoset,opossum,panda,rabbit, lincRNA lincRNA A549@0.0568565,AG04450@0.0117895,BJ@0.012517,GM12878@0.0155995,H1HESC@0.122597,HELAS3@0,HEPG2@0.0027965,HMEC@0.021179,HSMM@1.63128,HUVEC@0.0135155,K562@0,MCF7@0.0642625,NHEK@0.00982133,NHLF@0.010055,SKNSHRA@0.013116, 0 0 0 0 ENSG00000229867.1 ENST00000454260.1 chr2:120001998-120006647 2 3216 1431 exonic 2.42 0 0,1,1 0 0,0,0 51.0621890547264 126.876310272537 38.624 46.1809701492537 118.933612858141 2.63 52.1234452736318 135.111111111111 5.98 0 0 chimp,elephant,horse,human,macaque,marmoset,orangutan, antisense antisense A549@0.0227165,AG04450@0.132264,BJ@0.015355,GM12878@0.032113,H1HESC@0.02135,HELAS3@0.0118885,HEPG2@0.030405,HMEC@0.015269,HSMM@0.060881,HUVEC@0.011891,K562@0.003137,MCF7@0.0424865,NHEK@0.009958,NHLF@0.0604225,SKNSHRA@0.065536, 0 0 0 0 ENSG00000231013.1 ENST00000413602.1 chr2:120234024-120244922 2 2017 8879 intronic 4.09 0 0,0,0 0 0,0,0 0 0 0 0 3.01205090663363 4.05 0 3.53271764838383 4.26 0 0 chimp,horse,human,marmoset,orangutan, antisense antisense A549@0.043897,AG04450@0,BJ@0,GM12878@0,H1HESC@0.027287,HELAS3@0.0020675,HEPG2@0.0010775,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0.0020145,NHEK@0,NHLF@0,SKNSHRA@0.0047485, 0 0 0 0 ENSG00000231013.1 ENST00000457436.1 chr2:120234266-120243585 3 498 8817 intronic -1.08 0 0,1,0 0 0,0,0 0 0 0 0 3.03323125779744 4.05 0 3.55755926051945 4.26 0 0 cat,chimp,horse,human,macaque,marmoset,orangutan,panda, antisense antisense A549@0.043897,AG04450@0,BJ@0,GM12878@0,H1HESC@0.027287,HELAS3@0.0020675,HEPG2@0.0010775,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0.0020145,NHEK@0,NHLF@0,SKNSHRA@0.0047485, 0 0 0 0 ENSG00000224789.1 ENST00000455707.1 chr2:120932461-120974120 3 572 41083 exonic -0.96 0 0,1,0 1 0,0,0 7.23776223776224 0 0 21.3846153846154 2.02419492247402 0 103.164335664336 47.786894822676 235.895 0 0 human, antisense antisense A549@0.0096075,AG04450@0.007796,BJ@0,GM12878@0.0714,H1HESC@0.277305,HELAS3@0.00868,HEPG2@0,HMEC@0,HSMM@0.0035785,HUVEC@0.01643,K562@0.0042715,MCF7@0.0283685,NHEK@0.086392,NHLF@0,SKNSHRA@0.094039, 0 0 0 0 ENSG00000235840.1 ENST00000437837.1 chr2:121076583-121083874 3 552 6735 intergenic 1.24 0 0,0,0 0 0,0,0 0 13.9058648849295 0 2.88949275362319 23.5569413511507 6.305 2.79891304347826 25.0773570898293 6.839 0 0 chimp,dog,guinea_pig,human,macaque,marmoset,orangutan, lincRNA lincRNA A549@0.0171305,AG04450@0.00581,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0.011122,HUVEC@0,K562@0.013276,MCF7@0.319698,NHEK@0,NHLF@0,SKNSHRA@0.0234805, 0 0 0 0 ENSG00000237614.1 ENST00000413991.1 chr2:121300485-121301902 2 526 889 intergenic 5.75 1 0,0,1 0 0,0,0 0 12.904386951631 0 0 0 0 0 0 0 0 0 chimp,human,macaque,marmoset,orangutan, lincRNA lincRNA A549@0,AG04450@0,BJ@0.027977,GM12878@0,H1HESC@0.0157155,HELAS3@0.110677,HEPG2@0.102248,HMEC@0.01551,HSMM@0.0086345,HUVEC@0,K562@0,MCF7@0.225699,NHEK@0.014837,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000232140.1 ENST00000432474.1 chr2:121311319-121315685 3 520 3842 intergenic 0.14 0 0,0,0 0 0,0,0 0 11.2566371681416 100.485 0 19.0473711608537 93.074 0 18.7873503383654 96.218 0 0 chimp,human,macaque,marmoset,orangutan, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0.015962,HEPG2@0.0219835,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000229774.1 ENST00000444963.1 chr2:121444211-121468041 2 322 23506 intergenic 1.82 0 0,0,0 0 0,0,0 0 2.189866417085 0 0 2.45932953288522 0 0 4.6425168042202 0 0 0 human,marmoset,orangutan, lincRNA lincRNA A549@0,AG04450@0,BJ@0.007469,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000229774.1 ENST00000421820.1 chr2:121466839-121468093 2 468 784 intergenic -10.99 0 0,0,1 0 0,0,0 0 0 0 0 0 0 0 0 0 0 0 chimp,human,macaque,marmoset,orangutan, lincRNA lincRNA A549@0,AG04450@0,BJ@0.007469,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000234455.1 ENST00000441053.1 chr2:121839013-121846302 2 810 6477 intergenic 1.34 0 0,0,1 0 0,0,0 0 4.91338582677165 0 0 2.83217538984098 3.315 0 5.26725335803613 3.367 0 0 chimp,human,macaque,marmoset,orangutan, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0.010956,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000236145.1 ENST00000432984.1 chr2:121935903-121940156 2 542 3709 intergenic -0.16 0 0,0,0 0 0,0,0 0 0 0 8.93911439114391 0 0 9.53505535055351 0 0 0 0 chimp,horse,human,macaque,marmoset,orangutan, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000236859.1 ENST00000414554.1 chr2:122407226-122408257 3 554 473 intergenic -4.75 0 0,1,1 1 0,0,0 0 0 151.025 5.08664259927798 12.630021141649 198.492 5.58483754512635 12.8520084566596 179.45 0 0 chimp,human,macaque,orangutan, lincRNA processed_transcript A549@0.688506,AG04450@0.637738,BJ@0.381932,GM12878@1.86128,H1HESC@0.604888,HELAS3@1.53476,HEPG2@1.39974,HMEC@0.474412,HSMM@0.491652,HUVEC@0.440086,K562@2.49153,MCF7@1.1182,NHEK@0.291648,NHLF@0.622174,SKNSHRA@1.16661, 0 0 0 0 ENSG00000236859.1 ENST00000413904.1 chr2:122407374-122408704 2 773 555 intergenic -1.34 0 1,1,1 1 0,0,0 0 0 95.525 0 10.763963963964 145.896 0 10.9531531531532 127.851 0 0 chimp,human,macaque,marmoset,orangutan, lincRNA processed_transcript A549@0.688506,AG04450@0.637738,BJ@0.381932,GM12878@1.86128,H1HESC@0.604888,HELAS3@1.53476,HEPG2@1.39974,HMEC@0.474412,HSMM@0.491652,HUVEC@0.440086,K562@2.49153,MCF7@1.1182,NHEK@0.291648,NHLF@0.622174,SKNSHRA@1.16661, 0 0 0 0 ENSG00000236859.1 ENST00000439321.1 chr2:122407559-122409114 3 1270 281 intergenic -1.34 0 0,1,1 1 0,0,0 0 0 74.796 3.28661417322835 0 113.6 3.32677165354331 0 108.623 1 1 chimp,human,macaque,marmoset,orangutan, lincRNA retained_intron A549@0.688506,AG04450@0.637738,BJ@0.381932,GM12878@1.86128,H1HESC@0.604888,HELAS3@1.53476,HEPG2@1.39974,HMEC@0.474412,HSMM@0.491652,HUVEC@0.440086,K562@2.49153,MCF7@1.1182,NHEK@0.291648,NHLF@0.622174,SKNSHRA@1.16661, 0 0 0 0 ENSG00000236859.1 ENST00000447668.1 chr2:122407658-122408740 2 995 85 intergenic -1.34 0 1,1,1 1 0,0,0 0 0 68.844 1.7427135678392 0 99.638 1.7427135678392 0 96.977 1 1 chimp,human,macaque,marmoset,orangutan, lincRNA retained_intron A549@0.688506,AG04450@0.637738,BJ@0.381932,GM12878@1.86128,H1HESC@0.604888,HELAS3@1.53476,HEPG2@1.39974,HMEC@0.474412,HSMM@0.491652,HUVEC@0.440086,K562@2.49153,MCF7@1.1182,NHEK@0.291648,NHLF@0.622174,SKNSHRA@1.16661, 0 0 0 0 ENSG00000236859.1 ENST00000419902.1 chr2:122407676-122485784 4 1039 77063 exonic -0.66 0 0,1,1 1 0,0,0 38.6130895091434 2.27397064739239 68.844 39.1944177093359 3.42740355293721 100.216 41.7603464870067 25.3325720514384 96.171 0 0 chimp,guinea_pig,human,macaque,marmoset,mouse,orangutan, lincRNA processed_transcript A549@0.688506,AG04450@0.637738,BJ@0.381932,GM12878@1.86128,H1HESC@0.604888,HELAS3@1.53476,HEPG2@1.39974,HMEC@0.474412,HSMM@0.491652,HUVEC@0.440086,K562@2.49153,MCF7@1.1182,NHEK@0.291648,NHLF@0.622174,SKNSHRA@1.16661, 0 0 0 0 ENSG00000224655.1 ENST00000438722.1 chr2:122548020-122554278 4 790 5462 intergenic -4.20 0 0,0,0 0 0,0,0 0 2.94251190040278 0 0 9.17466129622849 0 0 10.9469058952765 0 0 0 chimp,cow,human,macaque,marmoset,orangutan, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0.0095545,H1HESC@0.024802,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0.005183,HUVEC@0,K562@0,MCF7@0.005179,NHEK@0.001659,NHLF@0,SKNSHRA@0.0203405, 0 0 0 0 ENSG00000224655.1 ENST00000422238.1 chr2:122548036-122552616 3 647 3929 intergenic -6.22 0 0,0,1 0 0,0,0 24.8408037094281 0 0 23.9969088098918 5.6777806057521 0 34.7604327666151 6.87604988546704 0 0 0 cat,chimp,cow,dog,horse,human,macaque,marmoset,orangutan,pig,rat, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0.0095545,H1HESC@0.024802,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0.005183,HUVEC@0,K562@0,MCF7@0.005179,NHEK@0.001659,NHLF@0,SKNSHRA@0.0203405, 0 0 0 0 ENSG00000224655.1 ENST00000435895.1 chr2:122548041-122553932 5 761 5122 intergenic 0 0 0,0,0 0 0,0,0 0 3.13783678250683 0 0 9.78367825068333 0 0 11.6735650136665 0 0 0 cat,chimp,horse,human,macaque,marmoset,orangutan, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0.0095545,H1HESC@0.024802,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0.005183,HUVEC@0,K562@0,MCF7@0.005179,NHEK@0.001659,NHLF@0,SKNSHRA@0.0203405, 0 0 0 0 ENSG00000224655.1 ENST00000422649.1 chr2:122548068-122552495 4 346 4075 intergenic 5.29 0 0,0,0 0 0,0,0 0 0 0 0 5.47435582822086 0 0 6.62969325153374 0 0 0 cat,chimp,horse,human,macaque,marmoset,orangutan, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0.0095545,H1HESC@0.024802,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0.005183,HUVEC@0,K562@0,MCF7@0.005179,NHEK@0.001659,NHLF@0,SKNSHRA@0.0203405, 0 0 0 0 ENSG00000237856.1 ENST00000435441.1 chr2:123822897-123825298 2 799 1600 intergenic 1.24 0 0,0,0 0 0,0,0 0 0 0 0 0 0 0 0 0 0 0 chimp,cow,dog,horse,human,macaque,marmoset,orangutan,panda, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000232740.1 ENST00000432894.1 chr2:123823727-123831057 3 581 6745 intergenic -4.08 0 0,0,0 0 0,0,0 0 7.40370644922165 0 0 8.63113417346182 0 0 10.6664195700519 0 0 0 human,macaque,marmoset,orangutan,panda, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000226708.1 ENST00000451749.1 chr2:124200842-124202021 2 267 910 intergenic 3.32 1 0,0,0 0 0,0,0 0 0 0 0 0 0 0 0 0 0 0 chimp,human,macaque,orangutan, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0.018398,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000228400.1 ENST00000438816.1 chr2:124774435-124782750 2 540 7773 intergenic 0 0 0,1,0 0 0,0,0 0 18.1548951498778 140.316 0 15.3624083365496 106.198 0 17.1996655088126 107.017 0 0 chimp,horse,human,macaque,marmoset,orangutan, antisense antisense A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0.108753,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0.208286, 0 0 0 0 ENSG00000235491.1 ENST00000430692.1 chr2:126468546-126523419 2 666 54205 intergenic -0.10 0 0,1,0 0 0,0,0 0 1.19800756387787 0 0 1.97764043907389 0 0 3.51070934415644 0 0 0 cat,chimp,cow,dog,elephant,guinea_pig,horse,human,macaque,marmoset,orangutan,rabbit, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0.007018,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000226813.2 ENST00000455174.2 chr2:126867676-126875562 4 620 7260 intergenic 1.83 0 0,0,1 0 0,0,0 0 0 0 0 1.66267217630854 0 0 1.72906336088154 0 0 0 chimp,dog,guinea_pig,horse,human,macaque,marmoset,orangutan,rabbit, lincRNA lincRNA A549@0,AG04450@0.0051675,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0.138602,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000235774.1 ENST00000435352.1 chr2:127066087-127101569 3 601 34877 intergenic -1.36 0 1,1,1 0 0,0,0 0 6.97866789001348 0 0 4.02554692204031 0 0 5.44258393783869 0 0 0 chimp,dog,guinea_pig,horse,human,macaque,marmoset,orangutan,rabbit, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0.285984,MCF7@0,NHEK@0.00508233,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000235774.1 ENST00000419223.1 chr2:127069991-127086709 2 438 16278 intergenic 0 0 0,0,0 0 0,0,0 0 14.9523897284679 0 62.2442922374429 6.95023958717287 0 45.2876712328767 9.14700823196953 21.09 0 0 chimp,cow,dog,elephant,guinea_pig,horse,human,macaque,marmoset,orangutan,panda,pig,rabbit, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0.285984,MCF7@0,NHEK@0.00508233,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000237524.2 ENST00000454927.1 chr2:127656472-127657211 3 407 328 intergenic -3.00 0 0,0,1 0 0,0,0 0 0 0 89.8402948402948 7.74390243902439 0 69.0712530712531 8.57317073170732 0 0 0 cat,chimp,dog,elephant,human,macaque,marmoset,orangutan,panda,rabbit, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000237524.2 ENST00000458326.1 chr2:127656484-127659673 7 707 2470 intergenic 12.74 0 0,0,1 0 0,0,0 0 0 0 62.7227722772277 9.61943319838057 0 55.5685997171146 8.48502024291498 0 0 0 chimp,human,marmoset,orangutan, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000237524.2 ENST00000450035.1 chr2:127656491-127659673 7 729 2441 intergenic 19.01 0 0,0,1 0 0,0,0 0 0 0 48.0096021947874 13.3236378533388 0.3 41.8600823045267 12.1855796804588 0 0 0 chimp,cow,human,marmoset,orangutan, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000237524.2 ENST00000437793.1 chr2:127656510-127657003 2 393 98 intergenic 0 0 0,0,0 0 0,0,0 0 0 0 62.3664122137405 10.734693877551 3.3 52.9440203562341 12.0408163265306 1.855 0 0 cat,chimp,cow,dog,elephant,human,macaque,marmoset,orangutan,panda,pig,rabbit, lincRNA retained_intron A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000237524.2 ENST00000436605.1 chr2:127656795-127659673 5 474 2396 intergenic -3.00 0 0,0,1 0 0,0,0 0 0 0 21.837552742616 12.5346410684474 27.637 22.4535864978903 11.2771285475793 22.505 0 0 chimp,elephant,human,macaque,marmoset,mouse,orangutan, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000237524.2 ENST00000441412.1 chr2:127657098-127659673 3 390 2181 intergenic -4.08 0 0,0,1 0 0,0,0 0 0 0 21.1 14.3681797340669 29.373 21.9153846153846 12.9082989454379 24.409 0 0 chimp,elephant,human,macaque,marmoset,orangutan,panda, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000236682.1 ENST00000433673.1 chr2:128146706-128158156 2 2688 8760 intergenic 0.35 1 0,0,1 0 0,0,0 0 0 0 1.02678571428571 1.04794520547945 0 1.24107142857143 1.36495433789954 0 0 0 chimp,human,macaque,marmoset,orangutan, lincRNA processed_transcript A549@0.351459,AG04450@0.070058,BJ@0.387219,GM12878@0.104176,H1HESC@0.142,HELAS3@0.289612,HEPG2@1.18058,HMEC@0.124818,HSMM@0.0265595,HUVEC@0.0221965,K562@0.0359285,MCF7@0.063074,NHEK@0.0170277,NHLF@0.0566665,SKNSHRA@0.113678, 0 0 0 0 ENSG00000231731.2 ENST00000454503.2 chr2:128225153-128247366 3 641 21568 intronic 0 0 0,0,0 0 0,0,0 0 13.2824554896142 0 0 17.7131862017804 0 0 19.0537370178042 0 0 0 chimp,dog,human,macaque,marmoset, antisense antisense A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0.031572,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000250457.1 ENST00000502946.1 chr2:128317620-128322364 2 2034 2708 intronic -0.14 0 0,0,0 0 0,0,0 0 0 34.727 0 9.95347119645495 52.997 0 15.903988183161 64.047 0 1 chimp,human,marmoset,orangutan, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000237532.1 ENST00000412312.1 chr2:129338065-129339150 2 355 728 intergenic -1.88 0 0,1,0 0 0,0,0 0 0 0 0 0 0 14.5577464788732 0 0 0 0 horse,human,panda, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000238277.1 ENST00000413403.1 chr2:129821419-129829298 2 658 7219 intergenic 3.04 0 0,0,0 0 0,0,0 0 0 0 47.8601823708207 0.286743316248788 0 91.8267477203647 1.7516276492589 0 0 0 cat,chimp,cow,dog,elephant,horse,human,macaque,marmoset,opossum,orangutan,panda,pig,platypus, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000204460.3 ENST00000375987.3 chr2:129999746-130031421 5 2208 29459 intergenic 6.97 0 0,0,0 0 0,0,0 0 7.08808852982111 0 0 7.10475576224583 0 0 8.5902780135103 0 0 0 chimp,human,macaque,marmoset,orangutan, lincRNA lincRNA A549@0.051317,AG04450@0,BJ@0,GM12878@0.007929,H1HESC@0.0048665,HELAS3@0.0023985,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0.007444,NHLF@0.0403775,SKNSHRA@0, 0 0 0 0 ENSG00000229536.1 ENST00000450531.1 chr2:130626766-130635126 2 561 7797 intergenic -2.74 0 0,0,0 1 0,0,0 0 0 0 0 1.94882647171989 0 0 2.10273181993074 0 0 0 cat,chimp,human,orangutan, lincRNA lincRNA A549@0.007711,AG04450@0,BJ@0.008746,GM12878@0.0113245,H1HESC@0.139819,HELAS3@0,HEPG2@0,HMEC@0.014546,HSMM@0.035652,HUVEC@0,K562@0,MCF7@0.043257,NHEK@0.0161087,NHLF@0,SKNSHRA@0.117385, 0 0 0 0 ENSG00000237574.1 ENST00000450840.1 chr2:130680750-130704276 4 2394 21126 intergenic 2.47 0 0,0,1 0 0,0,0 0 0 0 3.50083542188805 3.1316387389946 0 3.57351712614871 16.3188488118906 0 0 0 chimp,human,macaque,orangutan, lincRNA processed_transcript A549@0.002813,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0.001677,NHEK@0,NHLF@0,SKNSHRA@0.0056835, 0 0 0 0 ENSG00000224087.1 ENST00000433507.1 chr2:130865257-130867314 2 576 1479 intronic -1.37 0 0,0,0 0 0,0,0 0 0 0 0 4.02434077079107 0 0 4.30020283975659 0 0 0 chimp,elephant,horse,human,macaque,marmoset,orangutan,rabbit, antisense antisense A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0.004632,MCF7@0.0069565,NHEK@0,NHLF@0,SKNSHRA@0.039267, 0 0 0 0 ENSG00000223760.3 ENST00000427638.1 chr2:130887194-130896990 6 1835 7951 exonic 8.06 1 1,1,1 0 0,0,0 0 0 0 33.7651226158038 15.9462960633883 0 42.4555858310627 31.6819268016602 0 0 0 chimp,dog,human,macaque,marmoset,orangutan,rat, processed_transcript processed_transcript A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0.0982795,HELAS3@0.006802,HEPG2@0.002749,HMEC@0,HSMM@0,HUVEC@0,K562@0.185235,MCF7@0.0022335,NHEK@0,NHLF@0,SKNSHRA@0.002469, 0 0 0 0 ENSG00000225819.1 ENST00000450486.1 chr2:131273570-131284264 2 442 10250 intronic 2.56 0 0,0,0 0 0,0,0 0 3.73258536585366 0 0 10.9114146341463 0 0 14.5130731707317 0 0 0 chimp,human,macaque,orangutan,pig, antisense antisense A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0.00511, 0 0 0 0 ENSG00000225341.1 ENST00000422631.1 chr2:131287848-131294755 2 725 6180 intergenic 1.38 0 0,0,0 0 0,0,0 0 0 0 0 0 0 0 0 0 0 0 chimp,cow,elephant,horse,human,marmoset,orangutan,panda, antisense antisense A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0.003126, 122 2 75 2 ENSG00000232408.1 ENST00000457169.1 chr2:131341122-131348036 2 693 6219 intergenic 1.38 0 0,1,1 0 0,0,0 0 0 0 0 0 0 0 0 0 0 0 cat,chimp,elephant,horse,human,marmoset,orangutan,panda, antisense antisense A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0.00327, 122 2 75 2 ENSG00000229797.1 ENST00000448777.1 chr2:131501111-131513452 2 704 11635 exonic -4.37 0 0,0,1 0 0,0,0 0 0 0 0 0 23.23 0 0.689213579716373 23.552 0 0 chimp,human,macaque,marmoset,orangutan, antisense antisense A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0.00696, 0 0 0 0 ENSG00000229797.1 ENST00000436488.1 chr2:131507268-131513408 2 523 5615 exonic 0.18 0 0,0,0 0 0,0,0 0 0 0 0 0 23.23 0 0.735707925200356 23.552 0 0 chimp,human,macaque,marmoset,orangutan, antisense antisense A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0.00696, 0 0 0 0 ENSG00000233221.2 ENST00000429282.1 chr2:131588551-131594567 2 2822 3192 intergenic 10.94 0 0,1,1 0 0,0,0 0 0 0 1.33132530120482 0 0.867 1.4603118355776 0 3.336 0 0 chimp,human,macaque, lincRNA processed_transcript A549@0.0313785,AG04450@0.001976,BJ@0,GM12878@0.0014275,H1HESC@0.349369,HELAS3@0.633022,HEPG2@0.21276,HMEC@0.120166,HSMM@0,HUVEC@0,K562@0,MCF7@0.026705,NHEK@0.103184,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000233221.2 ENST00000446213.2 chr2:131593011-131594567 2 1271 283 intergenic 10.94 1 0,1,1 0 0,0,0 0 0 0 2.95594020456334 0 0.867 3.24232887490165 0 3.336 0 0 chimp,cow,horse,human,macaque,marmoset,orangutan,panda, lincRNA processed_transcript A549@0.0313785,AG04450@0.001976,BJ@0,GM12878@0.0014275,H1HESC@0.349369,HELAS3@0.633022,HEPG2@0.21276,HMEC@0.120166,HSMM@0,HUVEC@0,K562@0,MCF7@0.026705,NHEK@0.103184,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000223631.1 ENST00000437751.1 chr2:132160474-132166622 4 1857 4285 intergenic 2.59 0 0,0,0 0 0,0,0 0 0 0 1.78513731825525 0 0 2.99407646742057 0 0 0 0 chimp,human,orangutan, lincRNA lincRNA A549@0.0029685,AG04450@0,BJ@0,GM12878@0,H1HESC@0.006486,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0.0026395,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000224559.1 ENST00000431979.1 chr2:132394598-132407188 2 3514 9074 intergenic -0.56 1 0,0,0 0 0,0,0 0 0 0 4.09789413773477 0 0 5.45019920318725 55.8021820586291 0 0 0 chimp,human,orangutan, lincRNA lincRNA A549@0,AG04450@0.001977,BJ@0.0013765,GM12878@0.311495,H1HESC@0.000704,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0.02862,K562@0.464753,MCF7@1.90403,NHEK@0,NHLF@0.000555,SKNSHRA@0.003467, 0 0 0 0 ENSG00000224559.1 ENST00000437608.1 chr2:132396315-132401997 2 709 4971 intergenic -19.49 0 0,0,0 0 0,0,0 0 0 0 0 0 0 0 26.4677127338564 0 0 0 chimp,cow,elephant,horse,human,macaque,marmoset,orangutan,panda, lincRNA lincRNA A549@0,AG04450@0.001977,BJ@0.0013765,GM12878@0.311495,H1HESC@0.000704,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0.02862,K562@0.464753,MCF7@1.90403,NHEK@0,NHLF@0.000555,SKNSHRA@0.003467, 0 0 0 0 ENSG00000229203.1 ENST00000437330.1 chr2:132587374-132589604 3 559 1667 intergenic 6.03 0 0,0,1 0 0,0,0 0 0 0 192.488372093023 0 0 350.127012522361 56.371325734853 55.131 0 0 chimp,cow,dog,guinea_pig,horse,human,macaque,marmoset,mouse,opossum,orangutan,rat, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0.0081125,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000244337.2 ENST00000421696.2 chr2:132715850-132723108 2 573 6683 intergenic -3.71 0 0,0,0 0 0,0,0 24.1919720767888 0.500673350291785 0 77.39092495637 17.5473589705222 25.992 77.8446771378709 17.9194972317821 37.662 0 0 cat,chimp,cow,dog,elephant,guinea_pig,horse,human,macaque,marmoset,orangutan,panda,rabbit, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000235615.2 ENST00000419362.1 chr2:132722304-132737446 3 2206 12932 intergenic 11.28 0 0,0,0 0 0,0,0 7.90888485947416 0 0 11.5956482320943 0.147850293844726 0 12.2506799637353 1.12782245592329 0 0 0 chimp,human,orangutan, lincRNA lincRNA A549@0.0030535,AG04450@0,BJ@0,GM12878@0.0109295,H1HESC@0.00112,HELAS3@0,HEPG2@0.001929,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0.00119267,NHLF@0,SKNSHRA@0.002054, 0 0 0 0 ENSG00000236485.1 ENST00000419784.1 chr2:132741510-132751734 2 838 9384 intergenic 5.08 1 0,0,0 0 0,0,0 0 4.11764705882353 0 0 5.20790707587383 0 0 6.70566922421142 0 0 0 chimp,horse,human,macaque,panda, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000230803.1 ENST00000440802.1 chr2:133043368-133051950 3 319 8259 intergenic -0.44 0 0,0,0 0 0,0,0 0 0 0 0 0 0 0 59.6992371957864 0 0 0 chimp,human,orangutan, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0.045411,H1HESC@0,HELAS3@0.0547435,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0.056741,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000230065.1 ENST00000450509.1 chr2:133418099-133424563 2 372 6090 intronic -3.55 0 0,0,0 0 0,0,0 92 78.9742200328407 82.49 5.78225806451613 73.516091954023 112.251 12.7258064516129 71.5812807881774 143.633 0 0 cat,chimp,cow,dog,elephant,guinea_pig,horse,human,macaque,marmoset,orangutan,panda,pig, antisense antisense A549@0.005804,AG04450@0.0298375,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0.0583475,HMEC@0.021896,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000233729.1 ENST00000424510.1 chr2:133673130-133689067 2 1709 14226 intronic -0.34 1 0,0,0 0 0,0,0 0 46.5730352875018 0 1.48039789350497 31.975608041614 0 1.56407255705091 35.9798959651343 0 0 0 chimp,human,macaque,marmoset,orangutan, antisense antisense A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0.0062045,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0.00683167,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000226953.2 ENST00000454699.1 chr2:134022540-134026582 4 465 3571 intronic 1.89 0 0,0,0 0 0,0,0 93.0322580645161 68.3357602912349 151.652 28.2086021505376 52.0016802016242 131.212 24.4516129032258 58.4351722206665 115.49 0 0 cat,chimp,cow,elephant,horse,human,macaque,marmoset,orangutan,panda,pig, lincRNA processed_transcript A549@0.218676,AG04450@0.451902,BJ@0.1414,GM12878@0,H1HESC@0.082631,HELAS3@2.73479,HEPG2@0.0662815,HMEC@0,HSMM@0,HUVEC@0.0103685,K562@0,MCF7@0.163124,NHEK@0,NHLF@0.0759005,SKNSHRA@0.0084965, 0 0 0 0 ENSG00000226953.2 ENST00000432414.1 chr2:134023767-134042334 5 530 18029 intronic 1.89 0 0,1,0 0 0,0,0 124.007547169811 14.6679793665761 21.73 53 11.7396971545843 37.836 53.7018867924528 12.9729324976427 32.22 0 0 cat,chimp,cow,dog,elephant,horse,human,macaque,marmoset,orangutan,panda,pig,rabbit, lincRNA processed_transcript A549@0.218676,AG04450@0.451902,BJ@0.1414,GM12878@0,H1HESC@0.082631,HELAS3@2.73479,HEPG2@0.0662815,HMEC@0,HSMM@0,HUVEC@0.0103685,K562@0,MCF7@0.163124,NHEK@0,NHLF@0.0759005,SKNSHRA@0.0084965, 0 0 0 0 ENSG00000232474.1 ENST00000416437.1 chr2:134189237-134191468 2 552 1677 intronic 0 0 0,0,0 0 0,0,0 218.288043478261 9.32617769827072 32.675 370.052536231884 35.937984496124 1.195 349.847826086957 40.2635658914729 1.458 0 0 cat,chimp,cow,dog,elephant,guinea_pig,horse,human,macaque,marmoset,mouse,orangutan,panda,pig,rabbit,rat, sense_intronic sense_intronic A549@0.011021,AG04450@0.240801,BJ@0.0237425,GM12878@0,H1HESC@0.0061085,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0.05006,K562@0,MCF7@0.020749,NHEK@0.238077,NHLF@0.0160675,SKNSHRA@0, 0 0 0 0 ENSG00000223430.1 ENST00000420184.1 chr2:134311886-134315798 3 412 3496 intronic -3.04 0 0,0,1 0 0,0,0 20.0970873786408 36.1973684210526 0 11.2815533980583 30.4745423340961 0 11.9174757281553 35.5560640732265 0 0 0 chimp,elephant,guinea_pig,horse,human,macaque,marmoset,orangutan,panda,rabbit, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000224043.3 ENST00000392929.2 chr2:135493034-135676240 4 540 182660 exonic 0.98 0 0,1,1 1 0,0,0 74.2648148148148 3.13153947224351 162.623 141.638888888889 7.85398554691777 208.564 163.211111111111 11.2437150990912 206.491 0 0 cat,chimp,dog,horse,human,macaque,marmoset,mouse,opossum,orangutan,pig,rabbit,rat, antisense antisense A549@0.371842,AG04450@0.365506,BJ@0.51132,GM12878@0.230724,H1HESC@0.85831,HELAS3@0.310674,HEPG2@0.455725,HMEC@0.208182,HSMM@0.355885,HUVEC@0.233587,K562@0.396502,MCF7@0.411188,NHEK@0.226785,NHLF@0.331664,SKNSHRA@0.34411, 0 0 0 0 ENSG00000224043.3 ENST00000537615.1 chr2:135624632-135676176 5 971 50565 exonic 0.59 0 0,1,1 1 0,0,0 41.3007209062822 4.36614258874716 162.623 77.9289392378991 10.1604271729457 222.756 90.2708547888774 14.8294076930683 220.139 0 0 chimp,dog,horse,human,macaque,marmoset,orangutan,panda, antisense antisense A549@0.371842,AG04450@0.365506,BJ@0.51132,GM12878@0.230724,H1HESC@0.85831,HELAS3@0.310674,HEPG2@0.455725,HMEC@0.208182,HSMM@0.355885,HUVEC@0.233587,K562@0.396502,MCF7@0.411188,NHEK@0.226785,NHLF@0.331664,SKNSHRA@0.34411, 0 0 0 0 ENSG00000224043.3 ENST00000413962.1 chr2:135624888-135676248 3 633 50723 exonic 0.63 0 1,1,1 1 0,0,0 63.3538704581359 4.35254223922087 162.623 142.134281200632 10.1287778719713 206.849 158.88467614534 14.7832147152179 205.504 0 0 chimp,cow,horse,human,macaque,marmoset,mouse,orangutan,panda,pig,rat, antisense antisense A549@0.371842,AG04450@0.365506,BJ@0.51132,GM12878@0.230724,H1HESC@0.85831,HELAS3@0.310674,HEPG2@0.455725,HMEC@0.208182,HSMM@0.355885,HUVEC@0.233587,K562@0.396502,MCF7@0.411188,NHEK@0.226785,NHLF@0.331664,SKNSHRA@0.34411, 0 0 0 0 ENSG00000224043.3 ENST00000428857.1 chr2:135625003-135676280 4 673 50598 exonic 0.59 0 1,1,1 1 0,0,0 59.5884101040119 4.36329499189691 162.623 130.280832095097 10.1538005454761 204.378 145.745913818722 14.819735957943 202.998 0 0 chimp,cow,horse,human,macaque,marmoset,orangutan,pig,rabbit,rat, antisense antisense A549@0.371842,AG04450@0.365506,BJ@0.51132,GM12878@0.230724,H1HESC@0.85831,HELAS3@0.310674,HEPG2@0.455725,HMEC@0.208182,HSMM@0.355885,HUVEC@0.233587,K562@0.396502,MCF7@0.411188,NHEK@0.226785,NHLF@0.331664,SKNSHRA@0.34411, 0 0 0 0 ENSG00000226806.1 ENST00000437007.1 chr2:136577761-136580657 2 1860 1034 exonic -0.40 0 1,1,1 1 0,0,0 18.7956989247312 0 0 7.93387096774194 0 2.868 12.7048387096774 0 2.916 0 0 chimp,elephant,human,marmoset,orangutan, antisense antisense A549@0,AG04450@0.237642,BJ@0.0104875,GM12878@1.4567,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0.234402,HUVEC@0,K562@0.004102,MCF7@0.0033125,NHEK@0.0125553,NHLF@0,SKNSHRA@0.0248515, 0 0 0 0 ENSG00000231890.1 ENST00000419808.1 chr2:136742746-136774099 4 768 30579 exonic -4.16 0 0,1,0 1 0,0,0 56.375 40.2136760521927 6.27 83.6940104166667 43.1502338205958 6.599 75.4830729166667 44.3433729029726 9.699 0 0 chimp,dog,guinea_pig,horse,human,macaque,marmoset,orangutan,panda,pig, antisense antisense A549@0.168333,AG04450@0.120793,BJ@0.463545,GM12878@4.97549,H1HESC@0.203782,HELAS3@0.968886,HEPG2@1.3256,HMEC@0.230733,HSMM@0.164307,HUVEC@0.017757,K562@0.832061,MCF7@0.124771,NHEK@0.287865,NHLF@0.114653,SKNSHRA@0.283813, 0 0 0 0 ENSG00000231890.1 ENST00000438432.1 chr2:136742789-136765042 4 764 21483 exonic -1.11 0 0,1,0 1 0,0,0 56.6701570680628 32.6443699669506 6.27 102.79057591623 32.6518642647675 6.599 90.4437172774869 34.6574966252386 9.699 0 0 chimp,cow,elephant,guinea_pig,horse,human,macaque,marmoset,orangutan,panda,pig, antisense antisense A549@0.168333,AG04450@0.120793,BJ@0.463545,GM12878@4.97549,H1HESC@0.203782,HELAS3@0.968886,HEPG2@1.3256,HMEC@0.230733,HSMM@0.164307,HUVEC@0.017757,K562@0.832061,MCF7@0.124771,NHEK@0.287865,NHLF@0.114653,SKNSHRA@0.283813, 0 0 0 0 ENSG00000231890.1 ENST00000444406.1 chr2:136742904-136743706 2 440 360 exonic 0 0 0,1,1 1 0,0,0 98.4 11.8444444444444 6.27 134.343181818182 30.2888888888889 6.599 120.311363636364 27.0333333333333 9.699 0 0 chimp,dog,elephant,guinea_pig,horse,human,macaque,marmoset,orangutan,panda,pig,rabbit,rat, antisense antisense A549@0.168333,AG04450@0.120793,BJ@0.463545,GM12878@4.97549,H1HESC@0.203782,HELAS3@0.968886,HEPG2@1.3256,HMEC@0.230733,HSMM@0.164307,HUVEC@0.017757,K562@0.832061,MCF7@0.124771,NHEK@0.287865,NHLF@0.114653,SKNSHRA@0.283813, 0 0 0 0 ENSG00000231890.1 ENST00000446492.1 chr2:136743044-136756701 2 486 13169 exonic -4.16 0 0,1,0 0 0,0,0 82.9938271604938 24.3755790113144 29.192 156.251028806584 21.7327055964766 52.642 128.670781893004 23.6261675146177 55.131 0 0 cat,chimp,cow,dog,elephant,guinea_pig,horse,human,macaque,marmoset,mouse,orangutan,panda,pig,rabbit,rat, antisense antisense A549@0.168333,AG04450@0.120793,BJ@0.463545,GM12878@4.97549,H1HESC@0.203782,HELAS3@0.968886,HEPG2@1.3256,HMEC@0.230733,HSMM@0.164307,HUVEC@0.017757,K562@0.832061,MCF7@0.124771,NHEK@0.287865,NHLF@0.114653,SKNSHRA@0.283813, 0 0 0 0 ENSG00000231890.1 ENST00000399447.2 chr2:136757983-136765112 2 412 6715 intergenic -0.38 0 0,0,0 0 0,0,0 0 22.0518242740134 159.936 44.1140776699029 19.2963514519732 195.787 48.0776699029126 21.4631422189129 200.449 0 0 chimp,dog,horse,human,macaque,marmoset,orangutan,panda,pig, antisense antisense A549@0.168333,AG04450@0.120793,BJ@0.463545,GM12878@4.97549,H1HESC@0.203782,HELAS3@0.968886,HEPG2@1.3256,HMEC@0.230733,HSMM@0.164307,HUVEC@0.017757,K562@0.832061,MCF7@0.124771,NHEK@0.287865,NHLF@0.114653,SKNSHRA@0.283813, 0 0 0 0 ENSG00000231890.1 ENST00000444649.1 chr2:136770035-136774067 2 556 3474 intergenic -1.68 0 0,0,0 0 0,0,0 0 68.0736902705815 0 0 82.3730569948187 1.24 0 79.0342544617156 1.295 0 0 cat,chimp,cow,elephant,human,macaque,marmoset,mouse,orangutan,panda, antisense antisense A549@0.168333,AG04450@0.120793,BJ@0.463545,GM12878@4.97549,H1HESC@0.203782,HELAS3@0.968886,HEPG2@1.3256,HMEC@0.230733,HSMM@0.164307,HUVEC@0.017757,K562@0.832061,MCF7@0.124771,NHEK@0.287865,NHLF@0.114653,SKNSHRA@0.283813, 0 0 0 0 ENSG00000237262.1 ENST00000448672.1 chr2:136835462-136836083 2 467 152 intergenic -0.22 0 0,0,1 0 0,0,0 0 0 0 0 0 0 0 29.7236842105263 4.374 0 0 cat,chimp,cow,human,macaque,marmoset,orangutan,panda,pig, lincRNA lincRNA A549@0.011779,AG04450@0,BJ@0,GM12878@0.861384,H1HESC@0,HELAS3@0,HEPG2@0.0137245,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000234007.1 ENST00000458351.1 chr2:138636324-138683977 2 1267 46384 intergenic 0.04 0 0,1,0 0 0,0,0 0 20.8946835115557 0 0 26.6560236288375 0 0 27.5619610210417 0 0 0 cat,chimp,cow,dog,horse,human,macaque,marmoset,mouse,orangutan,rabbit, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0.0073885,H1HESC@0,HELAS3@0,HEPG2@0.052018,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000224231.1 ENST00000446520.1 chr2:138859454-138863475 3 550 3467 intergenic -0.15 0 0,1,0 0 0,0,0 0 0 67.962 0 1.29276031150851 113.185 10.7236363636364 2.01557542543986 131.368 0 0 chimp,dog,elephant,guinea_pig,horse,human,macaque,marmoset,orangutan,rabbit, lincRNA lincRNA A549@0.022835,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000228043.1 ENST00000431985.1 chr2:139175854-139259268 4 924 82484 intergenic -0.51 0 0,1,0 1 0,0,0 0 11.9136559817662 0 0 17.5218709082974 83.066 0 17.5863197711071 101.447 0 0 chimp,human,macaque,marmoset,orangutan,pig,rabbit, lincRNA processed_transcript A549@0.721621,AG04450@0.155191,BJ@0.192991,GM12878@0.30394,H1HESC@0.213616,HELAS3@0.747032,HEPG2@0.676097,HMEC@0.083834,HSMM@0.118585,HUVEC@0.265809,K562@0.326191,MCF7@1.38057,NHEK@0.357787,NHLF@0.186947,SKNSHRA@0.535046, 0 0 0 0 ENSG00000228043.1 ENST00000414911.1 chr2:139191945-139259244 5 862 66429 intergenic -0.19 0 0,1,1 1 0,0,0 35.7679814385151 13.1023498773126 0 114.748259860789 17.747956464797 83.066 127.371229698376 17.6127143265742 101.447 0 0 chimp,human,macaque,marmoset,orangutan, lincRNA processed_transcript A549@0.721621,AG04450@0.155191,BJ@0.192991,GM12878@0.30394,H1HESC@0.213616,HELAS3@0.747032,HEPG2@0.676097,HMEC@0.083834,HSMM@0.118585,HUVEC@0.265809,K562@0.326191,MCF7@1.38057,NHEK@0.357787,NHLF@0.186947,SKNSHRA@0.535046, 0 0 0 0 ENSG00000230569.1 ENST00000412593.1 chr2:139228226-139231502 3 823 2449 intergenic -6.01 0 0,0,1 0 0,0,0 32.996354799514 18.5316455696203 124.691 39.8930741190766 42.5455287872601 152.919 38.3292831105711 43.4291547570437 123.735 0 0 chimp,human,macaque,marmoset,orangutan, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0.0500145,K562@0,MCF7@0.004868,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000237772.1 ENST00000453636.1 chr2:139362080-139370737 2 678 7977 intergenic -1.38 0 0,0,1 0 0,0,0 0 0 0 2.92625368731563 1.18879277924032 1.434 6.38790560471976 1.26576407170616 5.391 0 0 cat,chimp,dog,elephant,human,macaque,marmoset,orangutan,panda,rabbit, lincRNA lincRNA A549@0.047619,AG04450@0.006592,BJ@0.016759,GM12878@0.130599,H1HESC@0.00428,HELAS3@0.105721,HEPG2@0.294756,HMEC@0.012043,HSMM@0.0090775,HUVEC@0.13238,K562@0.0072235,MCF7@0.46799,NHEK@0.219742,NHLF@0.005739,SKNSHRA@0.343118, 0 0 0 0 ENSG00000226939.1 ENST00000429008.1 chr2:140123735-140136717 4 553 12423 intergenic -1.30 0 0,0,1 0 0,0,0 0 59.6043628753119 40.5 0 47.9116155517991 40.739 13.3236889692586 50.8434355630685 55.878 0 0 chimp,human,macaque,marmoset,orangutan, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0.0037245,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000229131.1 ENST00000421326.1 chr2:140227345-140235317 2 464 7506 intergenic -5.20 0 0,0,1 0 0,0,0 15.8620689655172 4.17972288835598 0 6.80172413793103 3.97628563815614 17.579 7.03448275862069 5.05568878230749 22.022 0 0 chimp,human,macaque,orangutan, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0.474143,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000223554.1 ENST00000415918.1 chr2:140582465-140583446 2 296 683 intergenic 0.12 0 0,0,0 0 0,0,0 126.324324324324 0 0 67.625 5.3909224011713 2.295 68.1587837837838 10.8023426061493 2.385 0 0 chimp,cow,dog,horse,human,macaque,marmoset,orangutan,panda,pig,rabbit, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0.070065,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000224028.1 ENST00000417715.1 chr2:140861152-140889349 4 440 27751 intergenic -13.12 0 0,0,0 0 0,0,0 14.6363636363636 1.99387409462722 0 58.175 1.91877770170444 0 87.975 2.17375950416201 0 0 0 chimp,cow,dog,elephant,guinea_pig,horse,human,macaque,marmoset,opossum,orangutan,panda,pig,rabbit, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000228655.1 ENST00000442794.1 chr2:144072003-144238350 4 557 165784 intronic -7.44 0 0,0,1 0 0,0,0 145.008976660682 102.108852482749 99.084 63.9210053859964 105.171753607103 118.531 53.935368043088 103.573294165903 126.483 0 0 cat,chimp,cow,dog,elephant,guinea_pig,horse,human,macaque,marmoset,mouse,opossum,orangutan,panda,pig,rabbit, antisense antisense A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000231758.1 ENST00000413315.1 chr2:144398337-144413748 3 584 14823 intronic 1.93 0 0,0,0 0 0,0,0 181.001712328767 56.9036632260676 312.48 184.316780821918 64.2002968359981 327.647 196.515410958904 72.7058625109627 335.348 0 0 cat,chimp,cow,dog,elephant,guinea_pig,horse,human,macaque,marmoset,mouse,opossum,orangutan,panda,pig,rat, antisense antisense A549@0,AG04450@0,BJ@0.005513,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0.017218, 0 0 0 0 ENSG00000236356.1 ENST00000426716.1 chr2:144557036-144577168 3 461 19667 intergenic -16.15 0 0,0,0 0 0,0,0 248.832971800434 74.083795189912 0 327.676789587853 98.8937306147354 0 397.251626898048 118.786698530533 1.215 0 0 cat,chimp,cow,dog,elephant,guinea_pig,horse,human,macaque,marmoset,mouse,opossum,orangutan,panda,pig,rabbit, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000232377.1 ENST00000422799.1 chr2:144694640-144721723 3 1043 26036 intronic -5.10 0 0,1,1 0 0,0,0 1.6510067114094 225.017091719158 0 0 232.509256414196 0 0 222.743701029344 0 0 0 chimp,dog,human,macaque,marmoset,orangutan, antisense antisense A549@0,AG04450@0.0316795,BJ@0.0137815,GM12878@0,H1HESC@0.0039665,HELAS3@0,HEPG2@0,HMEC@0.015658,HSMM@0.007154,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0.005555,SKNSHRA@0, 0 0 0 0 ENSG00000238057.2 ENST00000427278.2 chr2:145275982-145278683 3 1212 1485 exonic 1.66 0 0,0,0 0 0,0,0 627.97886728656 530.74537037037 629.921 581.013524936602 502.642857142857 609.72 575.368554522401 447.560185185185 608.036 0 0 chimp,cow,elephant,horse,human,marmoset,mouse,opossum,orangutan,rat, antisense non_coding A549@0,AG04450@0.012969,BJ@0.0172005,GM12878@0.0178695,H1HESC@0.0040735,HELAS3@0.003783,HEPG2@0,HMEC@0,HSMM@0.082885,HUVEC@0.013158,K562@0.0318915,MCF7@0.001692,NHEK@0,NHLF@0.030465,SKNSHRA@0.040118, 0 0 0 0 ENSG00000238057.2 ENST00000428623.1 chr2:145277181-145278466 4 426 853 exonic 1.66 0 0,1,0 0 0,0,0 632.326291079812 615.117233294256 472.62 560.255868544601 539.924970691677 482.22 526.507042253521 576.381008206331 419.139 0 0 chimp,cow,elephant,horse,human,marmoset,mouse,orangutan,panda,rabbit,rat, antisense non_coding A549@0,AG04450@0.012969,BJ@0.0172005,GM12878@0.0178695,H1HESC@0.0040735,HELAS3@0.003783,HEPG2@0,HMEC@0,HSMM@0.082885,HUVEC@0.013158,K562@0.0318915,MCF7@0.001692,NHEK@0,NHLF@0.030465,SKNSHRA@0.040118, 0 0 0 0 ENSG00000238057.2 ENST00000421083.1 chr2:145277421-145278445 3 450 570 exonic 1.66 0 0,1,0 0 0,0,0 646.915555555556 601.114035087719 520.227 579.135555555555 595.226315789474 471.398 569.337777777778 666.787719298246 397.091 0 0 chimp,cow,elephant,guinea_pig,horse,human,macaque,marmoset,mouse,orangutan,panda,rabbit,rat, antisense non_coding A549@0,AG04450@0.012969,BJ@0.0172005,GM12878@0.0178695,H1HESC@0.0040735,HELAS3@0.003783,HEPG2@0,HMEC@0,HSMM@0.082885,HUVEC@0.013158,K562@0.0318915,MCF7@0.001692,NHEK@0,NHLF@0.030465,SKNSHRA@0.040118, 0 0 0 0 ENSG00000232606.1 ENST00000413525.1 chr2:145324002-145337001 2 360 12637 intergenic -6.42 0 0,0,1 0 0,0,0 464.644444444444 58.0288834375247 103.726 401.577777777778 61.1031890480336 108.199 409.819444444444 61.6951808182322 108.369 0 0 cat,chimp,cow,dog,elephant,guinea_pig,horse,human,macaque,marmoset,mouse,opossum,orangutan,panda,pig,rabbit,rat, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0.006297,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0.0213205,SKNSHRA@0.03137, 0 0 0 0 ENSG00000226674.1 ENST00000432608.1 chr2:145425534-145525950 4 657 99753 intergenic -2.13 0 0,0,0 0 0,0,0 77.0106544901065 59.164335909697 0 46.5570776255708 58.1151644562069 0 57.0928462709285 64.3306166230589 0 0 0 chimp,cow,dog,elephant,human,macaque,marmoset,orangutan,panda,pig,rabbit,rat, lincRNA lincRNA A549@1.13247,AG04450@0.0130065,BJ@0.0686905,GM12878@0,H1HESC@0.104282,HELAS3@0.010901,HEPG2@0.0268395,HMEC@0,HSMM@0.122634,HUVEC@0.001574,K562@0.0042565,MCF7@0.24722,NHEK@0,NHLF@0.146277,SKNSHRA@0.008929, 0 0 0 0 ENSG00000226674.1 ENST00000451027.1 chr2:145425552-145802010 4 542 375910 intergenic -1.78 0 0,0,0 0 0,0,0 93.3505535055351 60.8295177037056 0 56.4354243542435 67.5617328615891 0 69.2066420664207 69.7308903726956 0 0 0 chimp,cow,dog,elephant,guinea_pig,horse,human,macaque,marmoset,orangutan,panda,pig,rabbit,rat, lincRNA lincRNA A549@1.13247,AG04450@0.0130065,BJ@0.0686905,GM12878@0,H1HESC@0.104282,HELAS3@0.010901,HEPG2@0.0268395,HMEC@0,HSMM@0.122634,HUVEC@0.001574,K562@0.0042565,MCF7@0.24722,NHEK@0,NHLF@0.146277,SKNSHRA@0.008929, 0 0 0 0 ENSG00000226674.1 ENST00000445791.1 chr2:145425552-145834296 4 4631 404107 intergenic 3.91 1 0,0,0 0 0,0,0 38.9721442453034 60.6449925391047 0 27.8317857914057 67.0767420509914 0 20.3223925717987 69.1257167037443 0 0 0 cat,chimp,cow,dog,elephant,guinea_pig,horse,human,macaque,marmoset,mouse,opossum,orangutan,panda,pig,rabbit,rat, lincRNA lincRNA A549@1.13247,AG04450@0.0130065,BJ@0.0686905,GM12878@0,H1HESC@0.104282,HELAS3@0.010901,HEPG2@0.0268395,HMEC@0,HSMM@0.122634,HUVEC@0.001574,K562@0.0042565,MCF7@0.24722,NHEK@0,NHLF@0.146277,SKNSHRA@0.008929, 0 0 0 0 ENSG00000226674.1 ENST00000431734.1 chr2:145425553-145568842 4 525 142758 intergenic -2.13 0 0,0,1 0 0,0,0 150 65.078895753653 0 103.71619047619 67.7697852309503 0 135.626666666667 70.910050575099 0 0 0 cat,chimp,cow,dog,elephant,horse,human,macaque,marmoset,mouse,orangutan,pig,rabbit,rat, lincRNA lincRNA A549@1.13247,AG04450@0.0130065,BJ@0.0686905,GM12878@0,H1HESC@0.104282,HELAS3@0.010901,HEPG2@0.0268395,HMEC@0,HSMM@0.122634,HUVEC@0.001574,K562@0.0042565,MCF7@0.24722,NHEK@0,NHLF@0.146277,SKNSHRA@0.008929, 0 0 0 0 ENSG00000226674.1 ENST00000414256.1 chr2:145425586-145647781 4 600 221589 intergenic -3.40 0 0,0,0 0 0,0,0 0 64.9138450013313 0 43.4866666666667 69.2325882602476 0 41.6866666666667 72.1745889913309 0 0 0 chimp,cow,elephant,guinea_pig,human,macaque,marmoset,orangutan,panda,pig,rat, lincRNA lincRNA A549@1.13247,AG04450@0.0130065,BJ@0.0686905,GM12878@0,H1HESC@0.104282,HELAS3@0.010901,HEPG2@0.0268395,HMEC@0,HSMM@0.122634,HUVEC@0.001574,K562@0.0042565,MCF7@0.24722,NHEK@0,NHLF@0.146277,SKNSHRA@0.008929, 0 0 0 0 ENSG00000226674.1 ENST00000451774.1 chr2:145425593-145831662 5 2093 403968 intergenic 1.28 0 0,0,0 0 0,0,0 0 60.6658596720533 0 1.34018155757286 67.0998222631497 0 1.39273769708552 69.1495019407478 0 0 0 chimp,cow,dog,elephant,guinea_pig,horse,human,macaque,marmoset,mouse,orangutan,pig,rabbit,rat, lincRNA lincRNA A549@1.13247,AG04450@0.0130065,BJ@0.0686905,GM12878@0,H1HESC@0.104282,HELAS3@0.010901,HEPG2@0.0268395,HMEC@0,HSMM@0.122634,HUVEC@0.001574,K562@0.0042565,MCF7@0.24722,NHEK@0,NHLF@0.146277,SKNSHRA@0.008929, 0 0 0 0 ENSG00000234940.1 ENST00000432431.1 chr2:145445980-145447752 2 797 973 intergenic -4.24 0 0,0,0 0 0,0,0 24.9372647427854 0 0 64.961104140527 2.09660842754368 0 64.1355081555834 2.17882836587873 0 0 0 cat,chimp,cow,dog,elephant,guinea_pig,horse,human,macaque,marmoset,orangutan,panda,pig,rabbit,rat, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0.0025735,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000226674.1 ENST00000423031.1 chr2:145780662-145830221 3 488 49067 intergenic -1.86 0 0,0,0 0 0,0,0 168.524590163934 52.3916073939715 368.074 87.9467213114754 57.62481912487 432.027 80.4139344262295 58.360833146514 375.101 0 0 cat,chimp,cow,dog,elephant,guinea_pig,horse,human,macaque,marmoset,mouse,opossum,orangutan,panda,rabbit, lincRNA lincRNA A549@1.13247,AG04450@0.0130065,BJ@0.0686905,GM12878@0,H1HESC@0.104282,HELAS3@0.010901,HEPG2@0.0268395,HMEC@0,HSMM@0.122634,HUVEC@0.001574,K562@0.0042565,MCF7@0.24722,NHEK@0,NHLF@0.146277,SKNSHRA@0.008929, 0 0 0 0 ENSG00000226674.1 ENST00000451478.1 chr2:145780725-145939972 3 449 158794 intergenic 0.18 0 0,0,0 0 0,0,0 200.563474387528 54.3109374409612 400.456 149.044543429844 58.2925866216608 433.109 151.089086859688 58.2115885990655 372.669 0 0 cat,chimp,cow,dog,elephant,guinea_pig,horse,human,macaque,marmoset,mouse,orangutan,panda,pig,rabbit, lincRNA lincRNA A549@1.13247,AG04450@0.0130065,BJ@0.0686905,GM12878@0,H1HESC@0.104282,HELAS3@0.010901,HEPG2@0.0268395,HMEC@0,HSMM@0.122634,HUVEC@0.001574,K562@0.0042565,MCF7@0.24722,NHEK@0,NHLF@0.146277,SKNSHRA@0.008929, 0 0 0 0 ENSG00000226674.1 ENST00000420472.1 chr2:145780754-145930242 2 763 148723 intergenic -0.13 0 0,0,0 0 0,0,0 45.8086500655308 57.9886836602274 415.362 19.0471821756225 62.0454132851006 438.695 17.1363040629096 61.9260369949504 376.2 0 0 cat,chimp,cow,dog,elephant,guinea_pig,horse,human,macaque,marmoset,orangutan,panda,pig,rabbit, lincRNA lincRNA A549@1.13247,AG04450@0.0130065,BJ@0.0686905,GM12878@0,H1HESC@0.104282,HELAS3@0.010901,HEPG2@0.0268395,HMEC@0,HSMM@0.122634,HUVEC@0.001574,K562@0.0042565,MCF7@0.24722,NHEK@0,NHLF@0.146277,SKNSHRA@0.008929, 0 0 0 0 ENSG00000226674.1 ENST00000414195.1 chr2:145929564-145940216 3 626 10022 intergenic 0.18 0 0,0,0 0 0,0,0 266.892971246006 0 0 319.696485623003 2.88694871283177 0 297.805111821086 3.3750748353622 0 0 0 cat,chimp,cow,dog,elephant,guinea_pig,horse,human,macaque,marmoset,mouse,opossum,orangutan,panda,pig,rabbit,rat, lincRNA lincRNA A549@1.13247,AG04450@0.0130065,BJ@0.0686905,GM12878@0,H1HESC@0.104282,HELAS3@0.010901,HEPG2@0.0268395,HMEC@0,HSMM@0.122634,HUVEC@0.001574,K562@0.0042565,MCF7@0.24722,NHEK@0,NHLF@0.146277,SKNSHRA@0.008929, 0 0 0 0 ENSG00000235435.1 ENST00000454965.1 chr2:146051845-146089415 5 343 37219 intergenic 0 0 0,0,0 0 0,0,0 0 56.8595609769204 311.472 0 66.0749885811011 375.779 7.87172011661808 65.6040731884253 361.953 0 0 chimp,horse,human,macaque,marmoset,orangutan,pig, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000225107.1 ENST00000420548.1 chr2:146326862-146345592 4 829 17895 intergenic 1.51 0 0,0,0 0 0,0,0 0 62.6697401508801 0 2.39324487334138 52.6048058116792 0 2.42219541616405 63.6143056719754 0 0 0 chimp,human,marmoset,orangutan, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0.115145,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0.0218085, 0 0 0 0 ENSG00000226218.1 ENST00000418416.1 chr2:146358475-146360991 3 404 2108 intergenic -3.88 1 0,0,0 0 0,0,0 54.0717821782178 166.80265654649 0 0 190.879981024668 0 0 161.882352941176 0 0 0 chimp,human,marmoset,orangutan,pig, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000233842.1 ENST00000414967.1 chr2:146672658-146688714 4 743 15307 intergenic 2.79 0 0,0,0 0 0,0,0 140.511440107672 58.5905141438557 114.242 0 59.0135885542562 54 8.05383580080754 65.7870255438688 66.364 0 0 cat,chimp,elephant,human,macaque,marmoset,orangutan,rabbit,rat, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0.010332,SKNSHRA@0, 0 0 0 0 ENSG00000231040.1 ENST00000450667.1 chr2:147595317-147607878 6 800 11751 intergenic 0.72 0 0,0,1 0 0,0,0 14.0725 8.42975065951834 103.383 9.18125 15.5971406688792 45.925 7.09625 18.033103565654 46.622 0 0 cat,chimp,cow,dog,horse,human,macaque,marmoset,orangutan,rabbit, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0.00158367,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000227902.1 ENST00000436245.1 chr2:147637477-147659500 7 525 21486 intergenic -5.08 0 0,0,1 0 0,0,0 0 32.2918644698874 0 0 33.5193149027274 0 0 33.9070557572373 0 0 0 chimp,human,macaque,marmoset,orangutan, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0.00239967,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000223911.1 ENST00000402410.2 chr2:148656970-148660525 3 409 3142 exonic -3.04 0 0,1,0 0 0,0,0 130.171149144254 46.3911521323997 0 180.029339853301 53.037873965627 1.912 188.973105134474 53.7969446212603 2.008 0 0 cat,chimp,cow,elephant,guinea_pig,horse,human,macaque,marmoset,mouse,orangutan,pig,rat, antisense antisense A549@0,AG04450@0.014371,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000231079.1 ENST00000446781.1 chr2:149635630-149643156 2 1857 5667 intronic -2.80 1 0,0,0 0 0,0,0 23.0473882606354 14.3028057173107 0 7.19063004846527 17.0841715193224 13.267 9.98115239633818 20.0605258514205 11.368 0 0 cat,chimp,dog,elephant,horse,human,macaque,orangutan,panda,rabbit, antisense antisense A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0.005429,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0.0146585, 0 0 0 0 ENSG00000231969.1 ENST00000449714.1 chr2:150443710-150704747 3 1019 260014 exonic 24.48 0 0,1,1 0 0,0,0 0 16.2271300776112 0 8.57703631010795 20.8232672086888 19.402 9.0215897939156 21.7595283330898 20.404 0 0 chimp,horse,human,macaque,orangutan, antisense antisense A549@0.583353,AG04450@0.237484,BJ@0.650804,GM12878@0.114795,H1HESC@0.209995,HELAS3@2.62021,HEPG2@2.68164,HMEC@0,HSMM@0.293097,HUVEC@0.611954,K562@0.0799055,MCF7@0.137999,NHEK@0.060531,NHLF@0.147857,SKNSHRA@0.261575, 0 0 0 0 ENSG00000162947.4 ENST00000295052.3 chr2:150624020-150715705 5 1827 89850 intergenic 2.22 0 0,0,0 0 0,0,0 0 11.0531775180857 0 4.41543513957307 15.7584641068447 38.736 3.831964969896 17.1314858096828 48.454 0 0 chimp,elephant,guinea_pig,human,macaque,marmoset,orangutan,pig, lincRNA lincRNA A549@0.008872,AG04450@0.0163295,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0.0048595,K562@0,MCF7@0,NHEK@0.0209963,NHLF@0,SKNSHRA@0.0050015, 0 0 0 0 ENSG00000162947.4 ENST00000433174.1 chr2:150672978-150714199 2 554 40665 intergenic 2.22 0 0,0,1 0 0,0,0 73.2346570397112 4.12962006639616 0 129.954873646209 8.3081765646133 1.673 116.086642599278 10.226755194885 1.701 0 0 chimp,dog,elephant,guinea_pig,horse,human,macaque,marmoset,orangutan,panda,pig,rabbit,rat, lincRNA lincRNA A549@0.008872,AG04450@0.0163295,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0.0048595,K562@0,MCF7@0,NHEK@0.0209963,NHLF@0,SKNSHRA@0.0050015, 0 0 0 0 ENSG00000230645.1 ENST00000437118.1 chr2:151027937-151157594 3 365 129288 intergenic 4.13 1 0,0,1 0 0,0,0 0 14.7777597302147 0 51.8356164383562 16.0656982859972 0 57.7150684931507 17.2910710970856 0 0 0 chimp,human,orangutan, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000231420.1 ENST00000429317.1 chr2:151091406-151113521 3 561 21550 intergenic -0.86 0 0,0,0 0 0,0,0 80.8983957219251 3.2753596287703 0 122.249554367201 6.00575406032483 0 130.625668449198 7.95948955916473 0 0 0 chimp,dog,elephant,guinea_pig,horse,human,macaque,marmoset,mouse,opossum,orangutan,panda,pig,rabbit,rat, lincRNA lincRNA A549@0,AG04450@0.0140685,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0.0080835,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0.037709,SKNSHRA@0, 0 0 0 0 ENSG00000236049.1 ENST00000441356.1 chr2:151409046-151428735 6 2522 17157 intergenic 2.21 0 0,0,0 0 0,0,0 63.6558287073751 19.3664393541995 0 48.4044409199048 28.6131608089992 0 47.5606661379857 36.5735851256047 0 0 0 cat,chimp,dog,elephant,guinea_pig,horse,human,macaque,marmoset,orangutan,panda, lincRNA lincRNA A549@0,AG04450@0.0183155,BJ@0.0029055,GM12878@0.012097,H1HESC@0.036457,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0.006599,HUVEC@0.009418,K562@0,MCF7@0,NHEK@0.565243,NHLF@0.006149,SKNSHRA@0.009243, 0 0 0 0 ENSG00000237220.1 ENST00000416350.1 chr2:151422648-151424594 3 542 1400 intergenic 0.13 1 0,0,0 0 0,0,0 59.3579335793358 0 0 143.741697416974 0 1.052 122.376383763838 0 5.327 0 0 cat,chimp,cow,elephant,guinea_pig,horse,human,macaque,marmoset,mouse,opossum,orangutan,panda,pig,rat, lincRNA lincRNA A549@0.0295925,AG04450@0.0944345,BJ@0.045864,GM12878@0.0147955,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0.0242815,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0.021322,SKNSHRA@0, 0 0 0 0 ENSG00000232359.1 ENST00000421624.1 chr2:151451616-151476581 2 566 24397 intergenic 1.35 0 0,0,0 0 0,0,0 25.4098939929329 24.8992499077755 12.24 3.35512367491166 31.9178177644792 20.699 2.74558303886926 30.5499446653277 14.89 0 0 chimp,human,macaque,marmoset,orangutan, lincRNA lincRNA A549@0,AG04450@0.017031,BJ@0,GM12878@0,H1HESC@0.103342,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0.026139,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0.0519965, 0 0 0 0 ENSG00000224048.1 ENST00000440668.1 chr2:151468895-151491630 3 736 21995 intergenic 4.43 0 0,1,0 0 0,0,0 19.375 15.3817231188907 0 0 22.0177313025688 38.28 0 21.8814275971812 36.58 0 0 chimp,dog,elephant,human,macaque,marmoset,orangutan,pig, lincRNA lincRNA A549@0,AG04450@0.016358,BJ@0.0116795,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0.003714,HUVEC@0,K562@0,MCF7@0,NHEK@0.00315833,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000224048.1 ENST00000413247.1 chr2:151485411-151491862 5 769 5674 intergenic 4.43 1 0,1,0 0 0,0,0 11.963589076723 17.2615438843849 0 0 18.5352485019387 0 0 18.9955939372577 0 0 0 chimp,elephant,horse,human,macaque,orangutan,pig,rabbit, lincRNA lincRNA A549@0,AG04450@0.016358,BJ@0.0116795,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0.003714,HUVEC@0,K562@0,MCF7@0,NHEK@0.00315833,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000224048.1 ENST00000423428.1 chr2:151485506-151491484 3 551 5423 intergenic 4.43 0 0,0,0 0 0,0,0 25.8802177858439 17.1698321962014 0 0 19.3931403282316 0 0 19.8747925502489 0 0 0 chimp,human,macaque,marmoset,orangutan,pig, lincRNA lincRNA A549@0,AG04450@0.016358,BJ@0.0116795,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0.003714,HUVEC@0,K562@0,MCF7@0,NHEK@0.00315833,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000224048.1 ENST00000427615.1 chr2:151485569-151491854 5 526 5751 intergenic 4.43 1 0,0,0 0 0,0,0 17.4904942965779 17.0304294905234 0 0 18.2870805077378 0 0 18.7412623891497 0 0 0 chimp,horse,human,macaque,marmoset,orangutan, lincRNA lincRNA A549@0,AG04450@0.016358,BJ@0.0116795,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0.003714,HUVEC@0,K562@0,MCF7@0,NHEK@0.00315833,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000224048.1 ENST00000443811.1 chr2:151485581-151491382 3 415 5382 intergenic 4.43 0 0,0,0 0 0,0,0 34.3614457831325 17.3006317354143 0 0 19.5408769973987 0 0 20.0261984392419 0 0 0 chimp,elephant,horse,human,macaque,marmoset,orangutan,pig, lincRNA lincRNA A549@0,AG04450@0.016358,BJ@0.0116795,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0.003714,HUVEC@0,K562@0,MCF7@0,NHEK@0.00315833,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000228064.1 ENST00000425983.1 chr2:151839020-151859988 4 653 20309 intronic 3.69 0 0,0,1 0 0,0,0 0 14.3958835984046 0 0 15.7490767639963 15.994 0 17.0932099069378 18.14 0 0 chimp,human,macaque,marmoset,orangutan, antisense antisense A549@0,AG04450@0.0102345,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0.01036, 0 0 0 0 ENSG00000236885.1 ENST00000447078.1 chr2:151974469-152042723 3 573 67677 intergenic -2.96 0 0,1,0 0 0,0,0 0 21.4733809122745 0 0 25.1563160305569 0 0 24.9812343927775 138.414 0 0 chimp,human,orangutan, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000225214.1 ENST00000420365.1 chr2:152954842-152965716 2 505 10367 exonic 12.06 0 0,1,0 0 0,0,0 118.764356435644 32.7804572200251 0.504 143.271287128713 32.8777852802161 16.931 146.334653465347 28.1651393845857 23.192 0 0 chimp,cow,elephant,horse,human,macaque,marmoset,orangutan,pig,rabbit,rat, antisense antisense A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000224612.1 ENST00000413043.1 chr2:154028501-154058240 4 379 29354 intergenic 0 0 0,0,0 0 0,0,0 0 1.05624446412755 0 0 0.575935136608299 0 0 1.17510390406759 0 0 0 chimp,cow,horse,human,macaque,marmoset,orangutan,panda, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000227708.1 ENST00000429916.1 chr2:154194219-154213936 4 353 19358 intergenic 0 0 0,0,0 0 0,0,0 34.2776203966006 13.6700588903812 0 112.178470254958 23.4492199607398 12.312 146.623229461756 24.9013844405414 12.655 0 0 chimp,cow,dog,elephant,guinea_pig,horse,human,macaque,marmoset,mouse,orangutan,pig,rabbit,rat, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000227400.2 ENST00000454312.1 chr2:154278130-154306334 3 552 27648 intergenic -2.46 0 0,0,0 0 0,0,0 0 4.78696469907407 44.697 0 7.53692853009259 42.617 541.244565217391 9.6431568287037 51.069 0 0 cat,chimp,cow,dog,elephant,guinea_pig,horse,human,macaque,marmoset,mouse,opossum,orangutan,panda,pig,rabbit,rat, processed_transcript processed_transcript A549@0.011278,AG04450@0.005334,BJ@0,GM12878@0.371884,H1HESC@0,HELAS3@0.030018,HEPG2@0.024446,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0.0130555,NHEK@0,NHLF@0,SKNSHRA@0.01774, 0 0 0 0 ENSG00000227400.2 ENST00000454537.1 chr2:154278199-154306332 2 425 27706 intergenic -2.46 0 0,0,0 0 0,0,0 0 4.77694362232008 44.697 0 7.5211506532881 42.617 563.195294117647 9.62296975384393 51.069 0 0 cat,chimp,cow,dog,elephant,guinea_pig,horse,human,macaque,marmoset,mouse,opossum,orangutan,panda,pig,platypus,rabbit,rat, processed_transcript processed_transcript A549@0.011278,AG04450@0.005334,BJ@0,GM12878@0.371884,H1HESC@0,HELAS3@0.030018,HEPG2@0.024446,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0.0130555,NHEK@0,NHLF@0,SKNSHRA@0.01774, 0 0 0 0 ENSG00000227400.2 ENST00000424322.1 chr2:154278321-154449801 2 584 170894 encompassing -2.46 0 0,1,1 0 0,0,0 0 6.93940688379931 0 0 10.8890013692698 0 229.993150684931 12.40409259541 0 0 0 chimp,dog,human,macaque,marmoset,mouse,orangutan,panda,rabbit,rat, processed_transcript processed_transcript A549@0.011278,AG04450@0.005334,BJ@0,GM12878@0.371884,H1HESC@0,HELAS3@0.030018,HEPG2@0.024446,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0.0130555,NHEK@0,NHLF@0,SKNSHRA@0.01774, 0 0 0 0 ENSG00000224675.1 ENST00000434635.1 chr2:155292365-155313950 5 2357 19220 intronic -1.17 0 0,0,0 0 0,0,0 0 44.0279396462019 0 0.608400509121765 42.3211758584807 0 1.54645736105219 46.6106139438085 0 0 0 chimp,human,macaque,marmoset,orangutan, antisense antisense A549@0.001838,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0.113752,HUVEC@0.0029595,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0.004709, 0 0 0 0 ENSG00000238004.1 ENST00000432599.1 chr2:155316369-155317332 2 509 452 intergenic 0 0 0,0,0 0 0,0,0 90.950884086444 0 0 0 0 82.702 0 0 87.739 0 0 chimp,dog,elephant,guinea_pig,horse,human,macaque,marmoset,orangutan,pig,rabbit, lincRNA lincRNA A549@0.029597,AG04450@0,BJ@0,GM12878@0,H1HESC@0.0231425,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0.0040235,NHEK@0,NHLF@0,SKNSHRA@0.457944, 0 0 0 0 ENSG00000235949.1 ENST00000443901.1 chr2:155552974-155554329 2 430 923 intergenic -5.39 0 0,0,0 0 0,0,0 193.539534883721 273.405200433369 568.295 43.993023255814 213.020585048754 238.205 58.9372093023256 209.471289274106 213.866 0 0 cat,chimp,elephant,guinea_pig,horse,human,macaque,marmoset,orangutan,panda,rabbit, antisense antisense A549@0,AG04450@0,BJ@0.039601,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0.306342,NHEK@0,NHLF@0,SKNSHRA@0.010513, 0 0 0 0 ENSG00000230991.1 ENST00000442706.1 chr2:155822025-155824515 2 391 2097 intergenic -2.96 0 0,0,0 0 0,0,0 0 15.4191702432046 0 0 35.2226990939437 0 4.80818414322251 35.2942298521698 2.673 0 0 cat,chimp,cow,dog,elephant,horse,human,macaque,marmoset,orangutan,panda,rabbit, lincRNA lincRNA A549@0,AG04450@0,BJ@0.0062645,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0.0068125,MCF7@0.0306945,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000226383.1 ENST00000448255.1 chr2:156868129-156881125 5 792 12196 intergenic 3.68 0 0,0,0 0 0,0,0 0 63.4460478845523 0 0 58.3744670383732 0 0 69.1814529353886 0 0 0 chimp,human,macaque,marmoset,panda, lincRNA lincRNA A549@0.470681,AG04450@0.0586515,BJ@0,GM12878@0,H1HESC@0.816078,HELAS3@0.211774,HEPG2@0.38681,HMEC@0,HSMM@0.0025815,HUVEC@0.0465295,K562@1.49708,MCF7@0,NHEK@0.483345,NHLF@0.0689355,SKNSHRA@0, 0 0 0 0 ENSG00000226383.1 ENST00000428651.1 chr2:156877047-156881088 3 1600 2437 intergenic 4.59 0 0,0,1 0 0,0,0 121.575 0 0 6.290625 2.35125153877719 0 13.31125 1.89413212966762 0 0 0 chimp,dog,guinea_pig,horse,human,macaque,marmoset,mouse,orangutan,panda, lincRNA lincRNA A549@0.470681,AG04450@0.0586515,BJ@0,GM12878@0,H1HESC@0.816078,HELAS3@0.211774,HEPG2@0.38681,HMEC@0,HSMM@0.0025815,HUVEC@0.0465295,K562@1.49708,MCF7@0,NHEK@0.483345,NHLF@0.0689355,SKNSHRA@0, 0 0 0 0 ENSG00000245949.1 ENST00000500318.1 chr2:157193084-157198632 2 5466 80 exonic 2.64 0 0,0,1 0 0,0,0 210.572447859495 213.2 225.017 256.141602634468 105 300.964 484.950237833882 52.3875 302.451 0 0 chimp,dog,horse,human,marmoset,orangutan,panda,rabbit, lincRNA lincRNA A549@0.0267335,AG04450@0.0051235,BJ@0.0092475,GM12878@0.044807,H1HESC@0,HELAS3@0.023783,HEPG2@0.0090165,HMEC@0.003407,HSMM@0,HUVEC@0.0005445,K562@0.0095715,MCF7@0.007179,NHEK@0.00583133,NHLF@0.0021915,SKNSHRA@0, 0 0 0 0 ENSG00000234584.1 ENST00000447019.1 chr2:158582220-158592517 2 543 9752 intergenic -0.96 0 0,0,1 0 0,0,0 0 0 464.899 0 0.52850697292863 412.908 13.1767955801105 1.37489745693191 424.4 0 0 cat,chimp,dog,horse,human,macaque,marmoset,orangutan, lincRNA lincRNA A549@0.207904,AG04450@0.444044,BJ@0.158401,GM12878@0,H1HESC@0.1045,HELAS3@0.023895,HEPG2@0.139099,HMEC@0,HSMM@0.036015,HUVEC@0.218979,K562@0.836709,MCF7@0.0560035,NHEK@0.499141,NHLF@0.067864,SKNSHRA@0.359654, 0 0 0 0 ENSG00000237327.1 ENST00000439185.1 chr2:158984469-158990500 2 355 5674 intronic -4.85 0 0,0,0 0 0,0,0 27.2676056338028 42.7668311596757 0 33.5070422535211 27.7751145576313 2.151 39 28.6802960874163 2.259 0 0 cat,chimp,cow,dog,elephant,guinea_pig,horse,human,macaque,marmoset,mouse,orangutan,panda,pig,rabbit, sense_intronic sense_intronic A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000227480.2 ENST00000412781.2 chr2:159023162-159092681 5 790 68721 exonic 5.02 1 0,0,0 0 0,0,0 33.4690265486726 27.0842403958091 0 45.5499367888748 25.8016298020955 0 38.9898862199747 28.3387223515716 5.346 0 0 cat,chimp,dog,horse,human,macaque,marmoset,orangutan,panda,pig, antisense antisense A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0.0386135,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000204380.2 ENST00000342892.4 chr2:159514849-159591514 4 4063 72596 exonic 2.93 0 0,0,0 0 0,0,0 43.4725572237263 32.9297895200838 0 22.5958651242924 34.4154223373189 0 26.9505291656412 38.3866604220618 0 0 0 chimp,horse,human,marmoset,orangutan, antisense antisense A549@0.0041775,AG04450@0,BJ@0.0015915,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0.002947,K562@0.0046795,MCF7@0.051526,NHEK@0.00236133,NHLF@0,SKNSHRA@0.0006835, 0 0 0 0 ENSG00000204380.2 ENST00000442666.1 chr2:159535168-159591330 2 823 55337 intronic 1.28 0 0,0,1 0 0,0,0 13.9125151883354 22.0607007969351 0 27.73390036452 24.9015667636482 0 23.7083839611179 28.8494858774419 0 0 0 cat,chimp,cow,dog,elephant,guinea_pig,horse,human,macaque,marmoset,orangutan,panda, antisense antisense A549@0.0041775,AG04450@0,BJ@0.0015915,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0.002947,K562@0.0046795,MCF7@0.051526,NHEK@0.00236133,NHLF@0,SKNSHRA@0.0006835, 0 0 0 0 ENSG00000228586.1 ENST00000449526.1 chr2:159542415-159610287 3 507 67361 intergenic 4.13 0 0,0,0 0 0,0,0 0 10.1086533750984 0 9.20118343195266 13.1880613411321 12.586 10.1972386587771 17.2532771188076 10.804 0 0 cat,chimp,human,macaque,marmoset,orangutan,panda,rabbit, processed_transcript processed_transcript A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0.0044565, 0 0 0 0 ENSG00000223642.1 ENST00000420020.1 chr2:160242878-160261143 4 551 17708 exonic -1.99 1 0,0,0 0 0,0,0 195.05444646098 61.9047323243732 52.502 253.963702359347 63.6905918229049 22.676 257.575317604356 66.7173593855885 18.827 0 0 cat,chimp,cow,dog,elephant,guinea_pig,horse,human,macaque,marmoset,mouse,opossum,orangutan,panda,pig,platypus,rabbit,rat, antisense antisense A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0.00351033,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000224152.1 ENST00000418474.1 chr2:160471807-160473593 2 1492 292 exonic 2.76 0 1,1,1 1 0,0,0 402.005361930295 520 172.83 345.914209115282 82.4452054794521 128.252 291.01273458445 86.5958904109589 167.82 0 0 chimp,cow,elephant,guinea_pig,horse,human,macaque,marmoset,opossum,orangutan,panda,pig,rabbit, lincRNA processed_transcript A549@0.891593,AG04450@0.776993,BJ@0.723123,GM12878@0.327736,H1HESC@1.9099,HELAS3@0.834993,HEPG2@0.597245,HMEC@1.46158,HSMM@0.940695,HUVEC@1.488,K562@2.38653,MCF7@1.62546,NHEK@0.513256,NHLF@0.536499,SKNSHRA@1.80036, 0 0 0 0 ENSG00000226266.1 ENST00000453016.1 chr2:160527219-160568941 3 398 41320 intergenic 0.79 0 0,1,0 1 0,0,0 151.060301507538 1.34520813165537 0 266.535175879397 8.10333978702807 52.208 268.929648241206 22.7431994191675 55.066 0 0 chimp,cow,dog,elephant,guinea_pig,horse,human,macaque,marmoset,mouse,orangutan,panda,pig,rabbit,rat, processed_transcript processed_transcript A549@0.699061,AG04450@0.397269,BJ@0.399748,GM12878@0.465168,H1HESC@0.723843,HELAS3@0.386494,HEPG2@0.210782,HMEC@0.081688,HSMM@0.21677,HUVEC@0.64395,K562@1.25231,MCF7@0.578915,NHEK@0.457593,NHLF@0.544296,SKNSHRA@0.48175, 0 0 0 0 ENSG00000226266.1 ENST00000418770.1 chr2:160527223-160568529 3 372 40930 intergenic 0.79 0 0,1,0 1 0,0,0 103.661290322581 0.971414610310286 37.664 120.110215053763 7.14263376496457 155.795 130.120967741935 22.0176398729538 149.048 0 0 chimp,cow,dog,elephant,guinea_pig,horse,human,macaque,marmoset,orangutan,pig,rabbit, processed_transcript processed_transcript A549@0.699061,AG04450@0.397269,BJ@0.399748,GM12878@0.465168,H1HESC@0.723843,HELAS3@0.386494,HEPG2@0.210782,HMEC@0.081688,HSMM@0.21677,HUVEC@0.64395,K562@1.25231,MCF7@0.578915,NHEK@0.457593,NHLF@0.544296,SKNSHRA@0.48175, 0 0 0 0 ENSG00000224467.1 ENST00000425470.1 chr2:161952742-162016735 3 500 63489 intronic 0.52 0 0,0,0 0 0,0,0 0 28.8562585644757 26.37 11.886 40.3954700814314 44.938 13.294 42.632330009923 45.071 0 0 chimp,cow,dog,guinea_pig,horse,human,macaque,marmoset,orangutan,panda,pig, antisense antisense A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0.0796335,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0.0045105, 0 0 0 0 ENSG00000235724.1 ENST00000421122.1 chr2:162079296-162111154 4 1043 30809 intronic 1.12 1 0,0,1 0 0,0,0 128.019175455417 133.938005128372 0 110.050814956855 154.655263072479 0 122.434324065197 146.015612321075 0 0 0 cat,chimp,cow,dog,elephant,guinea_pig,horse,human,macaque,marmoset,mouse,opossum,orangutan,panda,pig,platypus,rabbit,rat, antisense antisense A549@0.0041465,AG04450@0,BJ@0,GM12878@0.0341815,H1HESC@0,HELAS3@0.0379265,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0.0058475,NHEK@0.00737867,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000235724.1 ENST00000445372.1 chr2:162079771-162107673 4 534 27362 intronic -2.03 1 0,0,1 0 0,0,0 228.705992509363 150.811198011841 11.13 214.949438202247 172.651158541042 0 217.34456928839 162.51871208245 7.466 0 0 chimp,cow,dog,elephant,guinea_pig,horse,human,macaque,marmoset,mouse,opossum,orangutan,panda,pig,platypus,rabbit,rat, antisense antisense A549@0.0041465,AG04450@0,BJ@0,GM12878@0.0341815,H1HESC@0,HELAS3@0.0379265,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0.0058475,NHEK@0.00737867,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000227403.1 ENST00000439050.1 chr2:162101250-162105561 2 2331 1978 intergenic -2.13 1 1,1,1 1 0,0,0 205.518661518662 438.729524772497 0 225.063921063921 475.82760364004 3.962 224.649935649936 462.787158746208 4.13 0 0 chimp,human,marmoset,orangutan,pig,rabbit, lincRNA processed_transcript A549@1.64804,AG04450@0,BJ@0,GM12878@3.96144,H1HESC@0.919598,HELAS3@3.4016,HEPG2@1.56712,HMEC@1.66452,HSMM@0,HUVEC@0.037262,K562@0.006421,MCF7@0.97498,NHEK@2.65893,NHLF@0,SKNSHRA@0.0115085, 0 0 0 0 ENSG00000227403.1 ENST00000436506.1 chr2:162101266-162103965 3 762 1933 intergenic -7.30 0 1,1,1 1 0,0,0 151.44094488189 436.302121055354 0 206.208661417323 470.399379203311 3.962 192.270341207349 456.450077599586 4.13 0 0 cat,chimp,cow,dog,elephant,guinea_pig,horse,human,macaque,marmoset,opossum,orangutan,panda,pig,rabbit, lincRNA processed_transcript A549@1.64804,AG04450@0,BJ@0,GM12878@3.96144,H1HESC@0.919598,HELAS3@3.4016,HEPG2@1.56712,HMEC@1.66452,HSMM@0,HUVEC@0.037262,K562@0.006421,MCF7@0.97498,NHEK@2.65893,NHLF@0,SKNSHRA@0.0115085, 0 0 0 0 ENSG00000235724.1 ENST00000435692.1 chr2:162102758-162107557 3 478 4317 intergenic -1.66 0 0,0,0 0 0,0,0 671.730125523013 221.745656706046 28.92 760.598326359833 255.95552466991 10.878 751.983263598326 243.480194579569 21.553 0 0 cat,chimp,cow,dog,elephant,guinea_pig,horse,human,macaque,marmoset,mouse,opossum,orangutan,panda,pig,platypus,rabbit,rat, antisense antisense A549@0.0041465,AG04450@0,BJ@0,GM12878@0.0341815,H1HESC@0,HELAS3@0.0379265,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0.0058475,NHEK@0.00737867,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000224076.1 ENST00000444164.1 chr2:162279170-162279646 2 401 73 intronic -2.68 0 0,1,0 0 0,0,0 0 0 515.943 8.94763092269327 0 563.648 7.93017456359102 0 572.555 0 0 chimp,cow,elephant,horse,human,macaque,marmoset,orangutan,panda,pig,rat, antisense antisense A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000224076.1 ENST00000437683.1 chr2:162279170-162280088 2 400 516 exonic -2.68 0 0,1,0 0 0,0,0 317.6625 112.244186046512 570.096 375.175 66.4728682170543 518.514 418.17 32.1414728682171 521.107 0 0 chimp,cow,elephant,human,marmoset,mouse,orangutan,panda,pig,rabbit,rat, antisense antisense A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000230918.1 ENST00000418335.1 chr2:162929766-162931679 3 637 1272 exonic -2.22 0 0,0,0 1 0,0,0 42.9136577708006 8.21698113207547 9.89 49.1899529042386 29.686320754717 2.7 49.6844583987441 31.4960691823899 3.408 0 0 chimp,cow,guinea_pig,horse,human,macaque,marmoset,orangutan,panda,pig, antisense antisense A549@0,AG04450@0.84119,BJ@0.11528,GM12878@0.0353435,H1HESC@0.0250565,HELAS3@0.156528,HEPG2@0.063326,HMEC@0,HSMM@0.306183,HUVEC@0.0603245,K562@0,MCF7@0.006283,NHEK@0.0122407,NHLF@1.28471,SKNSHRA@0.0654355, 0 0 0 0 ENSG00000233397.1 ENST00000432251.1 chr2:162949939-162951364 2 617 806 intergenic 8.52 0 1,1,1 0 0,0,0 0 90.7741935483871 71.829 0 7.50496277915633 63.18 12.9967585089141 12.3250620347395 62.547 0 0 chimp,cow,elephant,guinea_pig,horse,human,macaque,orangutan,panda,pig, lincRNA lincRNA A549@0,AG04450@0.040198,BJ@0.007819,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0.198447,HSMM@0.167802,HUVEC@0,K562@0,MCF7@0,NHEK@0.343872,NHLF@0.056669,SKNSHRA@0, 0 0 0 0 ENSG00000236841.1 ENST00000418968.1 chr2:163018280-163029255 3 3520 7451 exonic 3.96 0 0,0,0 0 0,0,0 50.3417613636364 83.9895316064958 0 35.2457386363636 66.8457925110723 2.39 33.5943181818182 65.8525030197289 2.689 0 0 chimp,elephant,horse,human,macaque,marmoset,orangutan,pig, antisense antisense A549@0,AG04450@0.015565,BJ@0.0096055,GM12878@0.0013305,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0.006974,HSMM@0.0107645,HUVEC@0,K562@0,MCF7@0,NHEK@0.003696,NHLF@0,SKNSHRA@0.016524, 0 0 0 0 ENSG00000237750.2 ENST00000446838.2 chr2:163625446-163654482 5 2994 26034 intronic 1.11 1 0,0,0 0 0,0,0 6.46092184368737 11.7625412921564 23.808 9.67401469605878 8.33997848966736 40.661 9.5871743486974 9.41514941998925 42.24 0 0 chimp,dog,human,macaque,marmoset,orangutan, antisense antisense A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0.003923,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000237844.1 ENST00000429636.1 chr2:164606083-165208733 5 709 601933 intergenic -3.41 0 0,0,0 0 0,0,0 0 42.9648582151169 8.97 0 48.0510737906046 10.311 0 49.1111801479567 10.59 0 0 cat,chimp,cow,dog,elephant,horse,human,macaque,marmoset,orangutan,pig, lincRNA lincRNA A549@0,AG04450@0.004146,BJ@0,GM12878@0,H1HESC@0.009887,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000233255.1 ENST00000414885.1 chr2:165697259-165705844 2 565 8018 intronic -0.57 0 0,1,0 1 0,0,0 20.1681415929204 21.3705412821152 135.06 10.0053097345133 32.8684210526316 184.337 16.0637168141593 34.9004739336493 186.32 0 0 cat,chimp,horse,human,macaque,marmoset,orangutan,pig,rabbit, antisense antisense A549@0,AG04450@0.008307,BJ@0.101439,GM12878@0,H1HESC@0,HELAS3@0.477188,HEPG2@1.26121,HMEC@0.021665,HSMM@0.0040205,HUVEC@0.0359915,K562@0,MCF7@0.59963,NHEK@0.050455,NHLF@0.010209,SKNSHRA@0.008003, 0 0 0 0 ENSG00000236283.1 ENST00000431341.1 chr2:165848494-165947803 4 631 98672 exonic -6.24 0 0,0,0 0 0,0,0 205.900158478605 24.4423341981514 0 139.678288431062 29.3941341008594 0 155.480190174326 28.3052639046538 0 0 0 cat,chimp,cow,dog,elephant,guinea_pig,horse,human,macaque,marmoset,mouse,opossum,orangutan,pig,platypus,rabbit,rat, antisense antisense A549@0,AG04450@0,BJ@0.0152885,GM12878@0,H1HESC@0,HELAS3@0.0920275,HEPG2@0.217985,HMEC@0,HSMM@0,HUVEC@0,K562@0.0206125,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000235192.1 ENST00000425688.1 chr2:166651361-166666520 3 776 14379 intergenic 6.95 0 0,1,0 0 0,0,0 0 7.52868766951805 72.354 6.40979381443299 19.9328186939286 148.039 6.05025773195876 21.3186591557132 142.553 0 0 chimp,cow,elephant,horse,human,macaque,orangutan,panda, lincRNA lincRNA A549@0,AG04450@0.027595,BJ@0.14961,GM12878@0.0372855,H1HESC@1.19847,HELAS3@0,HEPG2@0,HMEC@0.215507,HSMM@0,HUVEC@0,K562@0,MCF7@0.295305,NHEK@0.614761,NHLF@0.0025045,SKNSHRA@0, 0 0 0 0 ENSG00000229195.1 ENST00000428888.1 chr2:166651367-166702601 2 370 50862 intergenic -2.90 0 0,0,1 0 0,0,0 157.394594594595 6.08992961346388 103.973 13.4432432432432 11.987004050175 19.012 12.6891891891892 12.365066257717 21.171 0 0 chimp,elephant,horse,human,macaque,marmoset,mouse,orangutan,panda,pig, lincRNA lincRNA A549@0,AG04450@0.006331,BJ@0.008699,GM12878@0,H1HESC@0.0159775,HELAS3@0,HEPG2@0.034925,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0.00969167,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000232411.1 ENST00000457108.1 chr2:166689558-166695608 3 503 5543 intergenic 6.18 0 0,0,0 0 0,0,0 0 0 0 0 0.714775392386794 0 0 2.42341692224427 0 0 0 chimp,human,macaque,marmoset,orangutan,pig,rabbit, lincRNA lincRNA A549@0,AG04450@0.0239245,BJ@0.0047825,GM12878@0.0046325,H1HESC@0,HELAS3@0,HEPG2@0.0173225,HMEC@0,HSMM@0,HUVEC@0.004805,K562@0,MCF7@0,NHEK@0.0312393,NHLF@0,SKNSHRA@0.0262935, 0 0 0 0 ENSG00000224490.1 ENST00000440322.1 chr2:166790367-166806401 4 2256 13772 exonic 1.02 0 0,0,0 0 0,0,0 36.0882092198582 9.93160034853326 39 49.1223404255319 14.4141736857392 53.04 57.8235815602837 18.0242521057218 53.332 0 0 chimp,cow,dog,guinea_pig,horse,human,macaque,marmoset,opossum,orangutan,pig, antisense antisense A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0.0009425,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0.0022685,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000224490.1 ENST00000446624.1 chr2:166790398-166804093 2 574 13119 intronic 0.72 0 0,0,1 0 0,0,0 0 10.4259470996265 39 0 15.1316411311838 53.04 0 18.9214116929644 53.332 0 0 cow,dog,human,macaque,marmoset,orangutan, antisense retained_intron A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0.0009425,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0.0022685,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000224490.1 ENST00000443032.1 chr2:166790401-166804663 5 539 13715 intronic 3.72 0 0,0,0 0 0,0,0 0 9.97287641268684 39 0 14.4740794750273 53.04 0 18.0991615020051 53.332 0 0 chimp,cow,horse,human,macaque,marmoset,orangutan, antisense antisense A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0.0009425,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0.0022685,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000236107.2 ENST00000447809.2 chr2:166938041-167158294 12 2293 217938 exonic 2.70 1 0,0,0 0 0,0,0 114.25686873092 16.1171158769925 0 108.863933711295 21.4164165955455 4.08 120.92891408635 21.8481173544769 2.59 0 0 chimp,dog,guinea_pig,human,macaque,marmoset,orangutan, antisense antisense A549@0.0011985,AG04450@0.016023,BJ@0.0080575,GM12878@0.0063205,H1HESC@0.0030895,HELAS3@0.0217305,HEPG2@0.0046215,HMEC@0.30199,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0.316396,NHLF@0.00253,SKNSHRA@0.0039405, 0 0 0 0 ENSG00000254552.1 ENST00000525330.1 chr2:167980414-167997465 2 774 16275 intronic 1.35 0 0,0,0 0 0,0,0 55.2248062015504 15.8800614439324 47.676 44.2390180878553 17.5376958525346 44.809 45.8255813953488 20.2395698924731 47.123 0 0 cat,chimp,cow,dog,elephant,guinea_pig,horse,human,macaque,marmoset,mouse,orangutan,panda,pig,rabbit, antisense antisense A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000228222.1 ENST00000442316.1 chr2:168149681-168414843 3 459 264699 intergenic 15.99 0 0,1,0 0 0,0,0 169.832244008715 9.8899466941696 232.151 171.873638344227 11.6033154639798 194.551 150.673202614379 14.4623440209445 192.629 0 0 cat,chimp,cow,dog,elephant,guinea_pig,horse,human,macaque,marmoset,mouse,opossum,orangutan,pig,rabbit,rat, lincRNA lincRNA A549@0,AG04450@0.010195,BJ@0.010476,GM12878@0,H1HESC@0.466046,HELAS3@0,HEPG2@0.0063415,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0.002763,NHLF@0.051323,SKNSHRA@0.141881, 0 0 0 0 ENSG00000235335.2 ENST00000430546.1 chr2:168671284-168726424 2 631 54507 exonic 3.80 0 0,0,1 0 0,0,0 191.923930269414 29.1994789660044 205.32 293.410459587956 30.1619425027978 234.267 276.925515055467 32.8851340194837 221.133 0 0 cat,chimp,cow,dog,guinea_pig,horse,human,macaque,marmoset,orangutan,panda,pig,platypus, antisense antisense A549@0,AG04450@0.037715,BJ@0.0038895,GM12878@0.0105905,H1HESC@0.0109735,HELAS3@0.306847,HEPG2@0.1996,HMEC@0,HSMM@0.260068,HUVEC@0.160058,K562@43.7451,MCF7@0,NHEK@0,NHLF@0.0030825,SKNSHRA@0.034341, 0 0 0 0 ENSG00000235335.2 ENST00000436982.2 chr2:168671563-168797654 5 638 125445 exonic 3.80 0 0,1,1 1 0,0,0 274.708463949843 21.9590816692575 0 429.539184952978 28.3427398461477 0 419.097178683385 30.0567818565905 0 0 0 cat,chimp,cow,dog,elephant,guinea_pig,horse,human,macaque,marmoset,mouse,orangutan,panda,pig,rabbit,rat, antisense antisense A549@0,AG04450@0.037715,BJ@0.0038895,GM12878@0.0105905,H1HESC@0.0109735,HELAS3@0.306847,HEPG2@0.1996,HMEC@0,HSMM@0.260068,HUVEC@0.160058,K562@43.7451,MCF7@0,NHEK@0,NHLF@0.0030825,SKNSHRA@0.034341, 0 0 0 0 ENSG00000227617.2 ENST00000425636.2 chr2:169628463-169642939 3 2887 11585 exonic 3.17 0 0,0,0 0 0,0,0 16.145479736751 7.57807509710833 0 42.0464149636301 10.753560638757 0 34.3585036369934 11.2918429003021 0 0 0 chimp,elephant,horse,human,marmoset,orangutan,pig, antisense antisense A549@0.0613755,AG04450@0.011522,BJ@0.0050535,GM12878@0.027159,H1HESC@0.014698,HELAS3@0,HEPG2@0.013886,HMEC@0.002834,HSMM@0.002848,HUVEC@0.001848,K562@0.0412225,MCF7@0.005597,NHEK@0.0133763,NHLF@0,SKNSHRA@0.035495, 0 0 0 0 ENSG00000235321.1 ENST00000432133.1 chr2:169957253-169957720 2 305 160 intergenic 0 0 0,0,0 0 0,0,0 0 0 0 0 0 0 0 0 1.944 0 0 chimp,human,macaque,orangutan, antisense antisense A549@0,AG04450@0,BJ@0,GM12878@0.009526,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0.00430033,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000244445.1 ENST00000413923.1 chr2:171197596-171200021 2 395 2028 intronic 0 0 0,0,0 0 0,0,0 231.055696202532 39.939349112426 0 33.4379746835443 56.189349112426 4.464 41.6227848101266 53.6967455621302 4.662 0 0 chimp,cow,dog,elephant,guinea_pig,horse,human,macaque,marmoset,opossum,orangutan,panda,pig,rabbit, antisense antisense A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000231898.2 ENST00000424391.1 chr2:171199982-171207453 3 382 7085 intronic 0 0 0,0,0 0 0,0,0 9.76701570680628 3.11912491178546 0 4.94764397905759 5.23076923076923 3.914 5.09424083769634 7.08426252646436 4.048 0 0 chimp,horse,human,macaque,marmoset,orangutan,panda, antisense antisense A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0.0070795,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000231898.2 ENST00000457834.1 chr2:171201309-171207621 2 509 5801 intronic -12.05 0 0,0,0 0 0,0,0 51.3104125736739 0 0 17.0609037328094 4.49439751766937 3.914 17.721021611002 6.67712463368385 4.048 0 0 chimp,cow,dog,guinea_pig,horse,human,macaque,marmoset,orangutan,panda, antisense antisense A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0.0070795,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000231898.2 ENST00000438635.1 chr2:171201359-171207565 4 732 5468 intronic -2.88 0 0,0,0 0 0,0,0 35.6789617486339 0 0 11.8633879781421 4.76810534016094 3.914 12.3224043715847 7.08376005852231 4.048 0 0 cat,chimp,cow,dog,elephant,guinea_pig,horse,human,macaque,marmoset,orangutan,panda, antisense antisense A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0.0070795,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000213981.3 ENST00000423519.1 chr2:171494879-171500454 4 507 5062 intronic 0.37 0 0,0,0 0 0,0,0 10.0039447731755 84.4397471355196 0 0 48.9188067957329 5.78 0 49.973133148953 150.6 0 0 chimp,horse,human,macaque,marmoset,orangutan,panda, lincRNA processed_transcript A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0.009786,HELAS3@0.0800875,HEPG2@0.306413,HMEC@0,HSMM@0.015608,HUVEC@0,K562@0.008364,MCF7@0.012071,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000213981.3 ENST00000428156.1 chr2:171496884-171551884 10 2179 52803 intronic 3.37 0 0,0,0 0 0,0,0 0 32.6988239304585 51.024 18.6535107847637 36.5273564002045 184.603 39.2413951353832 41.9599265193266 181.437 0 0 chimp,human,macaque,marmoset,orangutan, lincRNA processed_transcript A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0.009786,HELAS3@0.0800875,HEPG2@0.306413,HMEC@0,HSMM@0.015608,HUVEC@0,K562@0.008364,MCF7@0.012071,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000234350.1 ENST00000442456.1 chr2:171579719-171627276 7 2019 45526 intergenic 2.41 0 1,1,1 1 0,0,0 0 28.4077010938804 0 3.64735017335315 25.6695514650969 1.62 4.15651312530956 34.6641479594078 1.632 0 0 chimp,human,macaque,marmoset,orangutan, lincRNA processed_transcript A549@0.0054725,AG04450@0.0078565,BJ@0.0120065,GM12878@0.118243,H1HESC@0.138664,HELAS3@0.0494465,HEPG2@0.067538,HMEC@0.044463,HSMM@0.0304085,HUVEC@0,K562@0.702326,MCF7@0.11851,NHEK@0.11348,NHLF@0.011557,SKNSHRA@0.0022435, 0 0 0 0 ENSG00000239467.1 ENST00000429172.1 chr2:171627623-171634252 5 556 6065 intergenic 6.48 0 0,1,0 1 0,1,0 18 0 0 88.5647482014388 8.74460016488046 4.59 125.568345323741 10.9045342126958 4.69 0 0 chimp,elephant,human,macaque,marmoset,orangutan,rabbit, lincRNA lincRNA A549@0.103379,AG04450@0.01448,BJ@0.007333,GM12878@0.0573985,H1HESC@0.298372,HELAS3@0.0142875,HEPG2@0.271438,HMEC@0.270115,HSMM@0.0225935,HUVEC@0.004046,K562@2.76403,MCF7@0.484223,NHEK@0.308767,NHLF@0.0756475,SKNSHRA@0.0040445, 0 0 0 0 ENSG00000239467.1 ENST00000426475.1 chr2:171627623-171634658 4 656 6373 intergenic -14.91 0 1,1,1 1 0,1,0 104.885670731707 0 0 162.99237804878 8.32198336733093 4.59 229.449695121951 10.3775302055547 4.69 0 0 cat,chimp,cow,dog,elephant,guinea_pig,horse,human,macaque,marmoset,mouse,opossum,orangutan,panda,pig,platypus,rabbit,rat, lincRNA lincRNA A549@0.103379,AG04450@0.01448,BJ@0.007333,GM12878@0.0573985,H1HESC@0.298372,HELAS3@0.0142875,HEPG2@0.271438,HMEC@0.270115,HSMM@0.0225935,HUVEC@0.004046,K562@2.76403,MCF7@0.484223,NHEK@0.308767,NHLF@0.0756475,SKNSHRA@0.0040445, 0 0 0 0 ENSG00000235934.1 ENST00000451730.1 chr2:171672803-171673682 2 510 367 exonic 1.44 0 0,0,0 0 0,0,0 91.1529411764706 249.686648501362 70.419 42.4882352941177 289.643051771117 93.24 46.9509803921569 266.623978201635 82.391 0 0 cat,chimp,cow,elephant,guinea_pig,horse,human,macaque,marmoset,orangutan,panda,pig,rabbit, antisense antisense A549@0,AG04450@0,BJ@0,GM12878@0.004285,H1HESC@0.015099,HELAS3@0.010028,HEPG2@0.01558,HMEC@0,HSMM@0.0044525,HUVEC@0,K562@0.0101205,MCF7@0,NHEK@0.021149,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000235934.1 ENST00000418106.1 chr2:171672813-171674405 3 537 1051 exonic 0 0 0,0,0 0 0,0,0 102.271880819367 116.95337773549 167.304 53.8268156424581 118.182683158896 191.485 58.9981378026071 104.571836346337 139.053 0 0 cat,chimp,elephant,guinea_pig,horse,human,macaque,marmoset,orangutan,pig, antisense antisense A549@0,AG04450@0,BJ@0,GM12878@0.004285,H1HESC@0.015099,HELAS3@0.010028,HEPG2@0.01558,HMEC@0,HSMM@0.0044525,HUVEC@0,K562@0.0101205,MCF7@0,NHEK@0.021149,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000235934.1 ENST00000455988.1 chr2:171672915-171674547 3 544 1084 exonic 0 0 0,1,0 0 0,0,0 124.838235294118 113.392988929889 154.232 98.7444852941176 114.584870848708 168.984 99.9117647058824 101.388376383764 116.19 0 0 cat,chimp,cow,dog,elephant,guinea_pig,horse,human,macaque,marmoset,mouse,orangutan,panda,pig,rabbit,rat, antisense antisense A549@0,AG04450@0,BJ@0,GM12878@0.004285,H1HESC@0.015099,HELAS3@0.010028,HEPG2@0.01558,HMEC@0,HSMM@0.0044525,HUVEC@0,K562@0.0101205,MCF7@0,NHEK@0.021149,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000250738.1 ENST00000514012.1 chr2:172167776-172170351 2 2256 317 intergenic 3.42 0 0,1,0 0 0,0,0 0 0 0 0 0 9.936 0 0 12.3 0 0 NA lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000228389.1 ENST00000416361.1 chr2:172629992-172632354 2 2100 260 intergenic 3.26 0 0,0,0 0 0,0,0 0 0 52.824 0 0 0 5.49809523809524 0 0 0 0 chimp,human, antisense antisense A549@0.127474,AG04450@0.118921,BJ@0.137352,GM12878@0.14716,H1HESC@0.0144095,HELAS3@0.089203,HEPG2@0.269077,HMEC@0.118723,HSMM@0.059801,HUVEC@0.453147,K562@0.0291375,MCF7@0.072288,NHEK@0.170483,NHLF@0.073201,SKNSHRA@0.131537, 0 0 0 0 ENSG00000236651.1 ENST00000448117.1 chr2:172967734-172974710 5 945 6023 intergenic 5.60 0 0,1,0 0 0,0,0 0 16.799601527478 417.546 6.6962962962963 34.7365100448282 478.992 12.2783068783069 34.98206873651 410.458 0 0 chimp,human,orangutan,pig, antisense antisense A549@0.0179595,AG04450@0.0204195,BJ@0.012825,GM12878@0,H1HESC@0,HELAS3@0.043104,HEPG2@0.0403925,HMEC@0.034481,HSMM@0.009131,HUVEC@0,K562@0.186687,MCF7@0.032128,NHEK@0.032521,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000232555.1 ENST00000445613.1 chr2:173180015-173188465 2 508 7940 intergenic 1.26 0 0,0,1 0 0,0,0 0 0 0 0 0 1.89 0 0 1.506 0 0 chimp,human,macaque,marmoset,orangutan, lincRNA lincRNA A549@0,AG04450@0.0063225,BJ@0,GM12878@0,H1HESC@0.0233085,HELAS3@0,HEPG2@0.032091,HMEC@0,HSMM@0,HUVEC@0.053559,K562@0,MCF7@0.224573,NHEK@0.032972,NHLF@0,SKNSHRA@0.0327145, 0 0 0 0 ENSG00000226963.1 ENST00000441212.1 chr2:173292502-173293331 2 556 271 exonic 7.58 0 0,0,1 0 0,0,0 29.7841726618705 27.1586715867159 75.502 222.192446043165 164.180811808118 40.232 193.991007194245 88.929889298893 53.632 0 0 chimp,cow,elephant,horse,human,macaque,marmoset,mouse,orangutan,pig,rat, antisense antisense A549@0,AG04450@0.04007,BJ@0.004412,GM12878@0,H1HESC@0.0578455,HELAS3@0.0264165,HEPG2@0,HMEC@0.007338,HSMM@0.03423,HUVEC@0.0053335,K562@0,MCF7@0,NHEK@0.055509,NHLF@0,SKNSHRA@0.004066, 0 0 0 0 ENSG00000232788.1 ENST00000458314.1 chr2:173328990-173330750 2 510 1248 intronic -3.21 1 0,0,1 0 0,0,0 0 0 0 7.74313725490196 29.556891025641 1.275 8.00196078431373 35.9206730769231 1.295 0 0 cat,chimp,dog,elephant,guinea_pig,horse,human,macaque,marmoset,orangutan,panda, antisense antisense A549@0.041696,AG04450@0.039913,BJ@0.0404205,GM12878@0.091954,H1HESC@0,HELAS3@0.010814,HEPG2@0.0265775,HMEC@0,HSMM@0.028854,HUVEC@0.016846,K562@0.013499,MCF7@0.010698,NHEK@0,NHLF@0.018843,SKNSHRA@0.0218255, 0 0 0 0 ENSG00000232788.1 ENST00000417539.1 chr2:173329875-173330740 2 752 111 exonic -0.61 0 0,0,1 0 0,0,0 0 0 0 54.3031914893617 0 1.275 65.0398936170213 0 1.295 0 0 cat,chimp,cow,elephant,horse,human,macaque,marmoset,orangutan,panda,pig,rabbit, antisense antisense A549@0.041696,AG04450@0.039913,BJ@0.0404205,GM12878@0.091954,H1HESC@0,HELAS3@0.010814,HEPG2@0.0265775,HMEC@0,HSMM@0.028854,HUVEC@0.016846,K562@0.013499,MCF7@0.010698,NHEK@0,NHLF@0.018843,SKNSHRA@0.0218255, 0 0 0 0 ENSG00000225205.1 ENST00000442417.1 chr2:173345568-173421257 4 946 74737 exonic -2.11 0 0,1,0 1 0,0,0 33.0961945031712 20.3991061990714 0 49.3276955602537 22.5917417075879 10.253 47 24.8781058913256 11.042 0 0 chimp,cow,human,marmoset,rabbit, antisense antisense A549@0.0824885,AG04450@0.128939,BJ@0.332712,GM12878@1.33678,H1HESC@0.792104,HELAS3@0.081423,HEPG2@0.12571,HMEC@0.417598,HSMM@0.203134,HUVEC@0.348125,K562@1.01076,MCF7@0.026361,NHEK@0.148356,NHLF@0.116403,SKNSHRA@0.138152, 0 0 0 0 ENSG00000225205.1 ENST00000450443.1 chr2:173368167-173421324 3 1394 51759 exonic 0.01 1 0,1,1 1 0,0,0 40.4340028694405 6.55066751676037 0 58.135581061693 7.192932630074 10.253 60.9956958393113 9.90998666898511 11.042 0 0 chimp,elephant,human,orangutan,pig, antisense antisense A549@0.0824885,AG04450@0.128939,BJ@0.332712,GM12878@1.33678,H1HESC@0.792104,HELAS3@0.081423,HEPG2@0.12571,HMEC@0.417598,HSMM@0.203134,HUVEC@0.348125,K562@1.01076,MCF7@0.026361,NHEK@0.148356,NHLF@0.116403,SKNSHRA@0.138152, 0 0 0 0 ENSG00000225205.1 ENST00000416080.1 chr2:173373757-173377238 3 651 2826 intergenic -4.89 0 0,1,0 0 0,0,0 0 0 0 0 0.902335456475584 0 0 0.937721160651097 0 0 0 chimp,human,macaque,marmoset,orangutan,pig, antisense antisense A549@0.0824885,AG04450@0.128939,BJ@0.332712,GM12878@1.33678,H1HESC@0.792104,HELAS3@0.081423,HEPG2@0.12571,HMEC@0.417598,HSMM@0.203134,HUVEC@0.348125,K562@1.01076,MCF7@0.026361,NHEK@0.148356,NHLF@0.116403,SKNSHRA@0.138152, 1 96 0 0 ENSG00000225205.1 ENST00000444919.1 chr2:173417343-173421136 2 412 3379 exonic 0 0 0,1,0 1 0,0,0 75.9927184466019 0 0 113.26213592233 5.50103580941107 7.958 107.917475728155 41.5513465522344 8.711 0 0 cat,chimp,cow,dog,elephant,guinea_pig,human,marmoset,mouse,opossum,orangutan,pig,rabbit,rat, antisense antisense A549@0.0824885,AG04450@0.128939,BJ@0.332712,GM12878@1.33678,H1HESC@0.792104,HELAS3@0.081423,HEPG2@0.12571,HMEC@0.417598,HSMM@0.203134,HUVEC@0.348125,K562@1.01076,MCF7@0.026361,NHEK@0.148356,NHLF@0.116403,SKNSHRA@0.138152, 0 0 0 0 ENSG00000225205.1 ENST00000436922.1 chr2:173420154-173421135 2 472 507 exonic -3.56 0 0,1,1 1 0,0,0 66.3326271186441 0 0 98.864406779661 11.8934911242604 7.958 94.1991525423729 11.8678500986193 8.711 0 0 cat,chimp,cow,dog,elephant,human,marmoset,opossum,orangutan,pig,rabbit, antisense antisense A549@0.0824885,AG04450@0.128939,BJ@0.332712,GM12878@1.33678,H1HESC@0.792104,HELAS3@0.081423,HEPG2@0.12571,HMEC@0.417598,HSMM@0.203134,HUVEC@0.348125,K562@1.01076,MCF7@0.026361,NHEK@0.148356,NHLF@0.116403,SKNSHRA@0.138152, 0 0 0 0 ENSG00000228016.1 ENST00000430128.1 chr2:173541869-173543755 2 590 1294 intergenic -2.16 0 0,0,1 0 0,0,0 0 0 0 0 5.11901081916538 0 0 5.26738794435858 0 0 0 chimp,cow,horse,human,macaque,marmoset,orangutan, lincRNA processed_transcript A549@0.0011985,AG04450@0.001149,BJ@0,GM12878@0.000574,H1HESC@0.0216995,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0.002203,NHEK@0.00198867,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000228016.1 ENST00000455435.1 chr2:173541876-173599097 3 636 56581 intergenic 0.12 0 0,1,1 0 0,0,0 0 4.87278415015641 0 5.61320754716981 4.89878227673601 8.511 6.25 5.96369806118662 8.726 0 0 chimp,cow,horse,human,macaque,marmoset,orangutan,panda, lincRNA processed_transcript A549@0.0011985,AG04450@0.001149,BJ@0,GM12878@0.000574,H1HESC@0.0216995,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0.002203,NHEK@0.00198867,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000228016.1 ENST00000435328.1 chr2:173587914-173600934 4 4621 8393 intronic 3.02 0 0,1,0 0 0,0,0 0 13.6722268557131 383.346 8.12291711750703 27.9955915643989 231.473 10.7182428045878 24.0004765876325 197.052 0 0 chimp,cow,dog,horse,human,macaque,marmoset,orangutan,panda, lincRNA processed_transcript A549@0.0011985,AG04450@0.001149,BJ@0,GM12878@0.000574,H1HESC@0.0216995,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0.002203,NHEK@0.00198867,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000238133.2 ENST00000419609.1 chr2:174031174-174072340 3 572 40590 intronic 1.91 0 0,0,0 0 0,0,0 0 46.709879280611 0 0 49.4368810051737 9.106 0 59.9289726533629 12.341 0 0 cat,chimp,cow,dog,elephant,guinea_pig,horse,human,macaque,orangutan,panda,pig, antisense antisense A549@0.0021765,AG04450@0,BJ@0,GM12878@0.001847,H1HESC@0.0187915,HELAS3@0,HEPG2@0.001679,HMEC@0,HSMM@0,HUVEC@0,K562@0.002797,MCF7@0,NHEK@0,NHLF@0.0007605,SKNSHRA@0, 0 0 0 0 ENSG00000238133.2 ENST00000422703.1 chr2:174031458-174136348 4 443 104441 intronic 1.91 0 0,0,0 0 0,0,0 0 48.4275045240854 0 0 50.259208548367 0 0 56.3232830018862 0 0 0 cat,chimp,human,macaque,marmoset,orangutan, antisense antisense A549@0.0021765,AG04450@0,BJ@0,GM12878@0.001847,H1HESC@0.0187915,HELAS3@0,HEPG2@0.001679,HMEC@0,HSMM@0,HUVEC@0,K562@0.002797,MCF7@0,NHEK@0,NHLF@0.0007605,SKNSHRA@0, 0 0 0 0 ENSG00000238133.2 ENST00000423106.2 chr2:174062440-174146764 8 2530 81780 exonic 2.80 0 0,1,0 0 0,0,0 309.777425742574 45.8074952619673 0 347.915643564356 44.7820627254387 0 346.781782178218 48.5126979274928 0 0 0 chimp,guinea_pig,human,macaque,marmoset,orangutan, antisense antisense A549@0.0021765,AG04450@0,BJ@0,GM12878@0.001847,H1HESC@0.0187915,HELAS3@0,HEPG2@0.001679,HMEC@0,HSMM@0,HUVEC@0,K562@0.002797,MCF7@0,NHEK@0,NHLF@0.0007605,SKNSHRA@0, 0 0 0 0 ENSG00000236391.2 ENST00000437243.1 chr2:174203068-174220936 2 334 17532 intronic 0 0 0,1,0 0 0,0,0 0 4.67265571526352 0 55.122754491018 4.92664841432809 1.15 60.0718562874251 62.1734542550764 1.215 0 0 cat,chimp,cow,dog,elephant,guinea_pig,horse,human,macaque,marmoset,orangutan,panda,pig,rabbit,rat, processed_transcript processed_transcript A549@0.0082205,AG04450@0,BJ@0,GM12878@0.0139525,H1HESC@0,HELAS3@0.047767,HEPG2@0,HMEC@0.024373,HSMM@0,HUVEC@0,K562@0.0073095,MCF7@0,NHEK@0.0264997,NHLF@0,SKNSHRA@0.013505, 0 0 0 0 ENSG00000224638.1 ENST00000418620.1 chr2:174745593-174764156 4 452 18105 intergenic -3.17 0 0,0,1 0 0,0,0 175.061946902655 23.6927368130351 0 150.794247787611 27.5097486882077 15.501 155.592920353982 26.2244131455399 16.284 0 0 chimp,cow,dog,elephant,human,macaque,marmoset,orangutan,rabbit, lincRNA lincRNA A549@0.033125,AG04450@0,BJ@0.005399,GM12878@0.078019,H1HESC@0.0045495,HELAS3@0,HEPG2@0.035045,HMEC@0,HSMM@0.033414,HUVEC@0.0328975,K562@0.033775,MCF7@0.024568,NHEK@0.160229,NHLF@0.008463,SKNSHRA@0.0536855, 0 0 0 0 ENSG00000231453.1 ENST00000420866.1 chr2:175190755-175195371 3 3120 1492 intergenic 4.48 1 0,1,1 0 0,0,0 112.305128205128 85.6950402144772 0 117.844871794872 57.8927613941019 26.797 121.820192307692 72.357908847185 32.504 0 0 chimp,cow,guinea_pig,horse,human,macaque,marmoset,orangutan,pig, lincRNA processed_transcript A549@0.386729,AG04450@0.0007175,BJ@0.0092645,GM12878@0,H1HESC@0.010056,HELAS3@0,HEPG2@0.000682,HMEC@0.001311,HSMM@0.00073,HUVEC@0,K562@0.275133,MCF7@0.0476365,NHEK@0.00162333,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000231453.1 ENST00000436820.1 chr2:175193500-175195270 2 1633 135 intergenic 2.11 1 0,0,1 0 0,0,0 146.048377219841 7.34814814814815 102.633 149.083282302511 20.3333333333333 49.379 172.360073484385 16.0222222222222 65.987 0 0 chimp,cow,guinea_pig,horse,human,macaque,marmoset,orangutan,panda,pig, lincRNA processed_transcript A549@0.386729,AG04450@0.0007175,BJ@0.0092645,GM12878@0,H1HESC@0.010056,HELAS3@0,HEPG2@0.000682,HMEC@0.001311,HSMM@0.00073,HUVEC@0,K562@0.275133,MCF7@0.0476365,NHEK@0.00162333,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000226853.1 ENST00000444196.1 chr2:175352117-175352884 2 559 206 intergenic 3.75 0 0,1,0 0 0,0,0 0 0 0 13.3524150268336 0 31.856 14.8622540250447 0 24.455 0 0 chimp,human,macaque,orangutan, lincRNA lincRNA A549@0.497726,AG04450@0.167948,BJ@0.156363,GM12878@0.331724,H1HESC@0.197978,HELAS3@0.251982,HEPG2@0.055838,HMEC@0.111183,HSMM@0.162951,HUVEC@0.117815,K562@0.0855,MCF7@0.086141,NHEK@0.127729,NHLF@0.100181,SKNSHRA@0.533407, 0 0 0 0 ENSG00000226853.1 ENST00000417038.1 chr2:175352131-175353028 2 391 504 intergenic -2.93 1 1,1,1 0 0,0,0 0 0 0 8.07161125319693 6.1765873015873 33.051 8.53196930946292 7.45436507936508 25.67 0 0 chimp,human,macaque,orangutan, lincRNA lincRNA A549@0.497726,AG04450@0.167948,BJ@0.156363,GM12878@0.331724,H1HESC@0.197978,HELAS3@0.251982,HEPG2@0.055838,HMEC@0.111183,HSMM@0.162951,HUVEC@0.117815,K562@0.0855,MCF7@0.086141,NHEK@0.127729,NHLF@0.100181,SKNSHRA@0.533407, 0 0 0 0 ENSG00000236449.1 ENST00000442996.1 chr2:175411869-175639555 4 2396 225284 encompassing 1.98 1 0,1,0 0 0,0,0 28.0826377295493 16.1739182542924 24.208 33.364774624374 19.1288817670141 31.675 34.4031719532554 21.5318309333996 31.768 0 0 chimp,human,macaque,marmoset,orangutan,pig,rabbit, lincRNA processed_transcript A549@0,AG04450@0.0134225,BJ@0.032715,GM12878@0,H1HESC@0.011784,HELAS3@0.0018545,HEPG2@0,HMEC@0,HSMM@0.017102,HUVEC@0,K562@0.616932,MCF7@0.01121,NHEK@0.015865,NHLF@0.010404,SKNSHRA@0.0052025, 0 0 0 0 ENSG00000236449.1 ENST00000412835.1 chr2:175412102-175530417 3 1402 116909 intronic 4.30 0 0,1,0 0 0,0,0 0 15.8572992669512 19.856 2.06134094151213 21.241230358655 17.143 2.10413694721826 23.3206596583668 17.026 0 0 chimp,dog,elephant,human,macaque,marmoset,orangutan, lincRNA processed_transcript A549@0,AG04450@0.0134225,BJ@0.032715,GM12878@0,H1HESC@0.011784,HELAS3@0.0018545,HEPG2@0,HMEC@0,HSMM@0.017102,HUVEC@0,K562@0.616932,MCF7@0.01121,NHEK@0.015865,NHLF@0.010404,SKNSHRA@0.0052025, 0 0 0 0 ENSG00000237798.1 ENST00000454203.1 chr2:175439955-175452454 2 455 12042 exonic 6.15 0 0,0,1 0 0,0,0 43.1692307692308 12.8780933399767 23.615 65.3164835164835 19.8736920777279 21.761 120.349450549451 20.5636106958977 32.187 0 0 cat,chimp,dog,guinea_pig,horse,human,macaque,marmoset,orangutan,panda, antisense antisense A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0.02517,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000237104.1 ENST00000416004.1 chr2:175647774-175652656 2 1877 3003 intergenic -0.29 0 0,0,0 0 0,0,0 0 0 0 16.1049547149707 0.557109557109557 9.828 16.0692594565796 0.404595404595405 14.744 0 0 chimp,human,macaque,marmoset,orangutan, lincRNA lincRNA A549@0,AG04450@0.009453,BJ@0,GM12878@0,H1HESC@0.0118915,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0.052279,NHEK@0,NHLF@0,SKNSHRA@0.0102175, 0 0 0 0 ENSG00000229750.1 ENST00000449168.1 chr2:176032632-176033250 2 495 121 exonic 0 0 0,1,1 0 0,0,0 162.90303030303 167.669421487603 33.602 254.185858585859 353.595041322314 55.956 216.583838383838 267.479338842975 57.663 0 0 cat,chimp,cow,dog,elephant,guinea_pig,horse,human,macaque,marmoset,mouse,orangutan,panda,pig,rabbit,rat, antisense antisense A549@0.017901,AG04450@0.019464,BJ@0.009738,GM12878@0.0342675,H1HESC@0.0457645,HELAS3@0.107572,HEPG2@0.141738,HMEC@0.024716,HSMM@0.022933,HUVEC@0.043418,K562@0.164787,MCF7@0.0080905,NHEK@0.007969,NHLF@0.0116905,SKNSHRA@0.0577275, 0 0 0 0 ENSG00000229066.1 ENST00000444567.1 chr2:176121978-176319368 3 478 196908 intergenic -11.79 0 0,1,0 0 0,0,0 0 58.6823440388404 0 15.3933054393305 59.7288683039795 0 14.8493723849372 61.0636845633495 0 0 0 chimp,human,macaque,orangutan, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 49 3 0 0 ENSG00000229066.1 ENST00000438963.1 chr2:176122070-176307696 2 766 184858 intergenic -3.56 0 0,1,0 0 0,0,0 417.454308093995 57.7688874703827 0 419.667101827676 59.468267535081 0 481.543080939948 60.6529822891084 0 0 0 cat,chimp,cow,dog,elephant,guinea_pig,human,macaque,marmoset,mouse,orangutan,panda,rabbit, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000235047.1 ENST00000453206.1 chr2:176762064-176768960 2 278 6616 intergenic -4.20 1 0,0,0 0 0,0,0 141.176258992806 35.4569226118501 0 209.10071942446 68.7543833131802 0 288.568345323741 71.5884220072551 0 0 0 chimp,human,macaque,orangutan,rat, antisense antisense A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0.0466095,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000229779.1 ENST00000458254.1 chr2:176769099-176770230 2 304 825 intergenic 0 1 0,0,0 0 0,0,0 70.2236842105263 13.0666666666667 0 98.9013157894737 59.190303030303 0 104.680921052632 71.6787878787879 0 0 0 chimp,cow,dog,elephant,guinea_pig,horse,human,macaque,marmoset,mouse,orangutan,panda, lincRNA lincRNA A549@0.01612,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000237380.1 ENST00000417215.1 chr2:176986339-176987094 2 422 331 intergenic -0.49 0 0,1,1 0 0,0,0 313.374407582938 41.3897280966767 486.465 409.800947867299 63.3051359516616 483.952 345.177725118483 45.0453172205438 516.335 0 0 cat,chimp,cow,elephant,guinea_pig,horse,human,marmoset,mouse,orangutan,panda,pig,rat, processed_transcript processed_transcript A549@0.202203,AG04450@0,BJ@0.142419,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0.007035,HSMM@0.0061195,HUVEC@1.78326,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0.367781, 0 0 0 0 ENSG00000237380.1 ENST00000440016.1 chr2:176987088-177001741 3 579 14070 exonic 10.80 0 0,1,1 1 0,0,0 45.2746113989637 162.76645344705 0 134.896373056995 237.820540156361 28.441 108.082901554404 239.105756929637 28.485 0 0 cat,chimp,cow,dog,elephant,guinea_pig,horse,human,macaque,marmoset,orangutan,pig, processed_transcript processed_transcript A549@0.202203,AG04450@0,BJ@0.142419,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0.007035,HSMM@0.0061195,HUVEC@1.78326,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0.367781, 0 0 0 0 ENSG00000237380.1 ENST00000426965.1 chr2:176999334-177001826 3 924 1564 exonic 10.80 0 1,1,1 1 0,0,0 28.3701298701299 119.29283887468 0 88.1158008658009 136.587595907928 39.721 71.258658008658 143.097826086957 34.645 0 0 cat,chimp,dog,guinea_pig,horse,human,macaque,marmoset,orangutan,pig, processed_transcript processed_transcript A549@0.202203,AG04450@0,BJ@0.142419,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0.007035,HSMM@0.0061195,HUVEC@1.78326,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0.367781, 0 0 0 0 ENSG00000224189.1 ENST00000416928.1 chr2:177037923-177042844 3 4064 853 intergenic 3.64 1 0,1,1 1 0,0,0 274.494586614173 9.88511137162954 55.458 233.023868110236 4.13833528722157 94.061 195.923228346457 4.09144196951934 112.688 0 0 chimp,dog,horse,human,macaque,orangutan,panda,pig, lincRNA processed_transcript A549@0.91843,AG04450@0.0076535,BJ@0.000595,GM12878@0.0004955,H1HESC@0.019434,HELAS3@3.45074,HEPG2@21.6511,HMEC@0.020737,HSMM@0.0038145,HUVEC@6.70767,K562@0.000604,MCF7@0.792839,NHEK@0.00133867,NHLF@0,SKNSHRA@3.12241, 0 0 0 0 ENSG00000224189.1 ENST00000417086.1 chr2:177040722-177053268 3 981 11561 intergenic 3.40 0 0,1,0 1 0,0,0 180.384301732926 23.2482484214168 108.852 129.603465851172 29.3971109765591 148.433 134.626911314985 34.9473228959433 184.635 0 0 cat,chimp,cow,dog,elephant,guinea_pig,horse,human,macaque,marmoset,orangutan,panda,pig, lincRNA processed_transcript A549@0.91843,AG04450@0.0076535,BJ@0.000595,GM12878@0.0004955,H1HESC@0.019434,HELAS3@3.45074,HEPG2@21.6511,HMEC@0.020737,HSMM@0.0038145,HUVEC@6.70767,K562@0.000604,MCF7@0.792839,NHEK@0.00133867,NHLF@0,SKNSHRA@3.12241, 0 0 0 0 ENSG00000224189.1 ENST00000436126.1 chr2:177040914-177052997 4 941 11136 intergenic 3.40 0 0,1,1 0 0,0,0 143.61211477152 24.1355064655172 35.898 84.9734325185972 30.5190373563218 101.88 93.3634431455898 35.9408225574713 128.55 0 0 cat,chimp,cow,dog,elephant,human,macaque,marmoset,orangutan,panda,pig, lincRNA processed_transcript A549@0.91843,AG04450@0.0076535,BJ@0.000595,GM12878@0.0004955,H1HESC@0.019434,HELAS3@3.45074,HEPG2@21.6511,HMEC@0.020737,HSMM@0.0038145,HUVEC@6.70767,K562@0.000604,MCF7@0.792839,NHEK@0.00133867,NHLF@0,SKNSHRA@3.12241, 0 0 0 0 ENSG00000224189.1 ENST00000413969.1 chr2:177041184-177053686 3 542 11956 exonic -1.99 0 0,1,1 1 0,0,0 78.2140221402214 22.4801773168284 172.092 127.088560885609 30.9568417530947 157.41 126.223247232472 36.6540649046504 191.562 0 0 cat,chimp,cow,dog,elephant,guinea_pig,human,macaque,marmoset,orangutan,panda,pig,rabbit, lincRNA processed_transcript A549@0.91843,AG04450@0.0076535,BJ@0.000595,GM12878@0.0004955,H1HESC@0.019434,HELAS3@3.45074,HEPG2@21.6511,HMEC@0.020737,HSMM@0.0038145,HUVEC@6.70767,K562@0.000604,MCF7@0.792839,NHEK@0.00133867,NHLF@0,SKNSHRA@3.12241, 0 0 0 0 ENSG00000224189.1 ENST00000456876.1 chr2:177041200-177042853 2 634 1017 intergenic -1.90 0 0,1,1 1 0,0,0 59.6214511041009 8.29105211406096 55.458 48.9148264984227 3.47099311701082 92.536 46.2697160883281 3.43166175024582 111.023 0 0 chimp,cow,elephant,guinea_pig,horse,human,macaque,marmoset,mouse,orangutan,panda,pig,rat, lincRNA processed_transcript A549@0.91843,AG04450@0.0076535,BJ@0.000595,GM12878@0.0004955,H1HESC@0.019434,HELAS3@3.45074,HEPG2@21.6511,HMEC@0.020737,HSMM@0.0038145,HUVEC@6.70767,K562@0.000604,MCF7@0.792839,NHEK@0.00133867,NHLF@0,SKNSHRA@3.12241, 0 0 0 0 ENSG00000224189.1 ENST00000447538.1 chr2:177041204-177042296 2 452 638 intergenic -6.66 0 0,0,1 0 0,0,0 81.0884955752212 13.2163009404389 55.458 41.0154867256637 5.53291536050157 93.656 33.5176991150442 5.47021943573668 103.813 0 0 cat,chimp,cow,dog,elephant,guinea_pig,horse,human,macaque,marmoset,orangutan,panda,pig,rat, lincRNA processed_transcript A549@0.91843,AG04450@0.0076535,BJ@0.000595,GM12878@0.0004955,H1HESC@0.019434,HELAS3@3.45074,HEPG2@21.6511,HMEC@0.020737,HSMM@0.0038145,HUVEC@6.70767,K562@0.000604,MCF7@0.792839,NHEK@0.00133867,NHLF@0,SKNSHRA@3.12241, 0 0 0 0 ENSG00000224189.1 ENST00000425005.1 chr2:177041208-177053207 5 618 11373 intergenic -1.28 0 1,1,1 1 0,0,0 57.4498381877023 23.6325507781588 108.852 33.6100323624595 29.6868020750901 150.011 33.9983818770227 35.055218499956 186.435 0 0 chimp,cow,guinea_pig,horse,human,macaque,marmoset,orangutan,panda,pig, lincRNA processed_transcript A549@0.91843,AG04450@0.0076535,BJ@0.000595,GM12878@0.0004955,H1HESC@0.019434,HELAS3@3.45074,HEPG2@21.6511,HMEC@0.020737,HSMM@0.0038145,HUVEC@6.70767,K562@0.000604,MCF7@0.792839,NHEK@0.00133867,NHLF@0,SKNSHRA@3.12241, 0 0 0 0 ENSG00000224189.1 ENST00000452365.1 chr2:177041252-177053259 5 656 11343 intergenic -0.93 0 1,1,1 1 0,0,0 34.8719512195122 23.6950542184607 108.852 29.8414634146341 29.765317817156 150.011 32.0289634146341 35.1479326456846 186.435 0 0 chimp,cow,dog,guinea_pig,horse,human,macaque,marmoset,orangutan,panda,pig, lincRNA processed_transcript A549@0.91843,AG04450@0.0076535,BJ@0.000595,GM12878@0.0004955,H1HESC@0.019434,HELAS3@3.45074,HEPG2@21.6511,HMEC@0.020737,HSMM@0.0038145,HUVEC@6.70767,K562@0.000604,MCF7@0.792839,NHEK@0.00133867,NHLF@0,SKNSHRA@3.12241, 0 0 0 0 ENSG00000226363.1 ENST00000426615.1 chr2:177042909-177043737 2 656 170 intergenic -3.57 1 1,1,1 1 0,0,0 35.8490853658537 185.823529411765 0 77.7881097560976 237.164705882353 13.083 99.922256097561 240.088235294118 15.184 0 0 chimp,cow,elephant,guinea_pig,horse,human,macaque,marmoset,mouse,orangutan,panda,pig,rabbit, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0.0339585,HELAS3@0,HEPG2@0.012952,HMEC@0.012446,HSMM@0,HUVEC@10.0237,K562@0.0070575,MCF7@0.334608,NHEK@0.00388,NHLF@0,SKNSHRA@0.1676, 0 0 0 0 ENSG00000229434.1 ENST00000412153.1 chr2:177370973-177372430 2 493 962 intergenic 0.93 0 0,0,0 0 0,0,0 0 0 199.18 2.58620689655172 0 132.254 2.62677484787018 0 121.228 0 0 cat,chimp,cow,dog,guinea_pig,human,marmoset,orangutan,panda, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0.0241865,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000236231.1 ENST00000431455.1 chr2:177389607-177396411 4 818 5980 intergenic -2.48 0 0,0,0 0 0,0,0 128.349633251834 88.6720735785953 221.258 239.389975550122 83.8443143812709 251.629 248.731051344743 82.7508361204013 248.417 0 0 cat,chimp,cow,dog,elephant,guinea_pig,horse,human,macaque,marmoset,orangutan,panda, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000163364.4 ENST00000295549.3 chr2:177494568-177502659 3 1153 6934 intergenic 8.50 0 1,1,1 1 0,0,0 0 78.5138448226132 409.28 39.1795316565481 77.026103259302 398.57 31.3529921942758 71.9254398615518 397.785 0 0 chimp,human,macaque,marmoset,orangutan, lincRNA lincRNA A549@1.82998,AG04450@0.331972,BJ@0.249903,GM12878@0,H1HESC@0.051597,HELAS3@0,HEPG2@0,HMEC@0.605642,HSMM@0.073046,HUVEC@1.07074,K562@0,MCF7@0.658154,NHEK@0.040859,NHLF@0.111119,SKNSHRA@20.8978, 0 0 0 0 ENSG00000163364.4 ENST00000339037.3 chr2:177494893-177502290 4 834 6557 intergenic -24.09 0 1,1,1 1 0,0,0 50.7398081534772 76.4987036754613 159.098 47.583932853717 78.9048345279853 168.885 53.5191846522782 70.9278633521428 170.701 0 0 chimp,human,macaque,marmoset,orangutan, lincRNA lincRNA A549@1.82998,AG04450@0.331972,BJ@0.249903,GM12878@0,H1HESC@0.051597,HELAS3@0,HEPG2@0,HMEC@0.605642,HSMM@0.073046,HUVEC@1.07074,K562@0,MCF7@0.658154,NHEK@0.040859,NHLF@0.111119,SKNSHRA@20.8978, 0 0 0 0 ENSG00000224577.1 ENST00000443670.1 chr2:177502438-177520686 4 695 17547 intergenic 9.20 0 0,1,1 1 0,0,0 63.9884892086331 95.350145323987 0 115.194244604317 104.453011910868 43.963 121.374100719424 109.985809540092 32.086 0 0 cat,chimp,cow,elephant,guinea_pig,horse,human,macaque,marmoset,orangutan,rabbit, lincRNA lincRNA A549@0.539923,AG04450@0.040808,BJ@0.055753,GM12878@0.011397,H1HESC@0.00354,HELAS3@0,HEPG2@0,HMEC@0.193308,HSMM@0.016306,HUVEC@0.258869,K562@0,MCF7@0.265439,NHEK@0.0186617,NHLF@0.0110415,SKNSHRA@2.52919, 0 0 0 0 ENSG00000230552.1 ENST00000438143.1 chr2:177588996-177630839 4 528 41309 intergenic 0.53 0 0,1,0 0 0,0,0 0 99.8071122515675 0 0 117.343992834491 0 0 117.860563073422 1.175 0 0 chimp,dog,elephant,human,macaque,marmoset,orangutan,pig, processed_transcript processed_transcript A549@0,AG04450@0,BJ@0,GM12878@0.001505,H1HESC@0.075972,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0.00044,NHEK@0,NHLF@0,SKNSHRA@0.000595, 0 0 0 0 ENSG00000230552.1 ENST00000428283.1 chr2:177618128-177683978 6 4667 61173 intergenic 7.49 1 0,0,1 0 0,0,0 48.0184272551961 81.3711768263776 127.14 66.7150203556889 91.6677782681902 165.536 68.7088065138204 91.8745851928138 142.02 0 0 chimp,elephant,horse,human,macaque,marmoset,orangutan,pig, processed_transcript retained_intron A549@0,AG04450@0,BJ@0,GM12878@0.001505,H1HESC@0.075972,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0.00044,NHEK@0,NHLF@0,SKNSHRA@0.000595, 0 0 0 0 ENSG00000230552.1 ENST00000430460.1 chr2:177625965-177627344 2 577 800 intergenic -9.78 0 0,0,0 0 0,0,0 0 0 258.286 2.14904679376083 7.52375 304.098 0 7.78 316.071 0 0 chimp,dog,guinea_pig,horse,human,macaque,marmoset,orangutan,panda,pig,rabbit, processed_transcript processed_transcript A549@0,AG04450@0,BJ@0,GM12878@0.001505,H1HESC@0.075972,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0.00044,NHEK@0,NHLF@0,SKNSHRA@0.000595, 0 0 0 0 ENSG00000230552.1 ENST00000451851.1 chr2:177626136-177684038 6 560 57332 intergenic 6.36 0 0,0,0 0 0,0,0 87.1964285714286 75.6154678015768 127.14 98.1767857142857 87.5393323100537 165.536 115.9125 88.1298925556408 142.02 0 0 cat,chimp,cow,elephant,guinea_pig,horse,human,macaque,marmoset,orangutan,panda,pig,rabbit,rat, processed_transcript processed_transcript A549@0,AG04450@0,BJ@0,GM12878@0.001505,H1HESC@0.075972,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0.00044,NHEK@0,NHLF@0,SKNSHRA@0.000595, 0 0 0 0 ENSG00000227098.1 ENST00000432925.1 chr2:177710721-177714156 2 561 2872 intergenic -1.88 0 0,1,0 0 0,0,0 0 154.834610027855 0 0 147.471100278551 0 0 139.447075208914 0 0 0 cat,chimp,guinea_pig,horse,human,macaque,marmoset,mouse,orangutan,panda,rabbit, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0.004066, 0 0 0 0 ENSG00000227098.1 ENST00000457756.1 chr2:177710784-177714131 3 555 2788 intergenic -1.89 0 0,0,0 0 0,0,0 0 159.499641319943 0 0 151.914275466284 0 0 143.648493543759 0 0 0 cat,chimp,elephant,guinea_pig,human,macaque,marmoset,mouse,orangutan, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0.004066, 0 0 0 0 ENSG00000236501.1 ENST00000452002.1 chr2:177855236-177921044 3 541 65263 intergenic -2.03 0 0,0,0 0 0,0,0 46.2550831792976 31.1020486339886 148.418 16.4158964879852 40.553361016196 214.286 21.6062846580407 44.134563228782 198.68 0 0 cat,chimp,cow,dog,elephant,guinea_pig,horse,human,macaque,marmoset,mouse,orangutan,pig,rabbit,rat, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0.0037055,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000236501.1 ENST00000441205.1 chr2:177855570-178029244 6 561 173103 intergenic 7.54 0 0,1,0 0 0,0,0 175.557932263815 38.9663379606362 142.047 68.475935828877 43.4189413239516 86.003 65.5044563279857 47.3072448195583 53.66 0 0 cat,chimp,cow,guinea_pig,horse,human,macaque,marmoset,orangutan,panda,rabbit,rat, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0.0037055,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000229337.1 ENST00000455416.1 chr2:178020350-178077390 2 216 56822 exonic 0 0 0,1,0 0 0,0,0 0 26.1302312484601 226.901 96.6712962962963 22.9741121396642 314.103 78.962962962963 44.0764844602442 312.856 0 0 chimp,cow,dog,guinea_pig,horse,human,macaque,marmoset,mouse,orangutan,panda,pig,rabbit,rat, antisense antisense A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000245460.2 ENST00000469031.2 chr2:178107103-178111509 2 3057 1347 intronic -3.32 0 0,0,0 0 0,0,0 17.8377494275433 12.4647364513734 0 15.8099443899248 12.898292501856 0 15.7615309126595 14.804008908686 0 1 1 chimp,human,macaque,marmoset,orangutan, lincRNA lincRNA A549@0.761934,AG04450@0.809012,BJ@0.363337,GM12878@0.314655,H1HESC@0.189009,HELAS3@0.83274,HEPG2@0.953415,HMEC@0.252566,HSMM@0.154325,HUVEC@0.518985,K562@0.616264,MCF7@0.335774,NHEK@0.501512,NHLF@0.353063,SKNSHRA@0.37637, 0 0 0 0 ENSG00000222043.2 ENST00000428541.1 chr2:178129087-178130243 2 497 657 exonic 0 0 0,1,1 0 0,0,0 0 0 139.048 41.6458752515091 62.8645357686454 165.479 42.7344064386318 69.8767123287671 130.218 0 0 cat,chimp,cow,elephant,human,macaque,marmoset,mouse,orangutan,panda,pig,rabbit, antisense antisense A549@0.136079,AG04450@0.0731395,BJ@0.108079,GM12878@0.08474,H1HESC@0.135498,HELAS3@0.120545,HEPG2@0.330447,HMEC@0.032823,HSMM@0.075881,HUVEC@0.118592,K562@0.086969,MCF7@0.240029,NHEK@0.0445447,NHLF@0.039059,SKNSHRA@0.073829, 0 0 0 0 ENSG00000213963.2 ENST00000397057.2 chr2:178148236-178257415 9 5193 103970 exonic 5.95 0 1,1,1 1 0,0,0 43.0242634315425 6.96713475040877 138.26 50.4471403812825 11.3613061460037 175.141 44.7213556710957 22.6078580359719 158.953 0 0 chimp,human,macaque,marmoset,orangutan, processed_transcript processed_transcript A549@2.54216,AG04450@1.32256,BJ@2.03382,GM12878@2.26367,H1HESC@1.16261,HELAS3@1.88185,HEPG2@3.06612,HMEC@1.23098,HSMM@1.83561,HUVEC@2.3708,K562@4.09816,MCF7@0,NHEK@1.93753,NHLF@0.60005,SKNSHRA@3.32477, 0 0 0 0 ENSG00000213963.2 ENST00000456746.1 chr2:178148240-178257419 6 5141 104028 exonic 5.95 1 1,1,1 1 0,0,0 44.0842248589769 6.94335178990272 136.704 52.5253841665046 11.2964298073596 172.733 46.9723789146081 22.5265120928981 156.677 0 0 chimp,human,macaque,marmoset,orangutan, processed_transcript processed_transcript A549@2.54216,AG04450@1.32256,BJ@2.03382,GM12878@2.26367,H1HESC@1.16261,HELAS3@1.88185,HEPG2@3.06612,HMEC@1.23098,HSMM@1.83561,HUVEC@2.3708,K562@4.09816,MCF7@0,NHEK@1.93753,NHLF@0.60005,SKNSHRA@3.32477, 0 0 0 0 ENSG00000213963.2 ENST00000430416.1 chr2:178148242-178187892 5 884 38758 intergenic -1.92 1 0,1,1 0 0,0,0 15.7873303167421 16.6694359874091 0 45.7963800904977 22.7645905361474 5.66 53.9954751131222 23.5691470148098 5.9 0 0 chimp,elephant,human,macaque,marmoset,mouse,orangutan,pig, processed_transcript processed_transcript A549@2.54216,AG04450@1.32256,BJ@2.03382,GM12878@2.26367,H1HESC@1.16261,HELAS3@1.88185,HEPG2@3.06612,HMEC@1.23098,HSMM@1.83561,HUVEC@2.3708,K562@4.09816,MCF7@0,NHEK@1.93753,NHLF@0.60005,SKNSHRA@3.32477, 0 0 0 0 ENSG00000213963.2 ENST00000443132.1 chr2:178175455-178179646 3 525 3662 intergenic -9.17 0 0,1,1 0 0,0,0 0 12.1182413981431 163.624 0 12.7654287274713 226.003 0 13.706990715456 239.53 0 0 chimp,human,macaque,marmoset,orangutan, processed_transcript processed_transcript A549@2.54216,AG04450@1.32256,BJ@2.03382,GM12878@2.26367,H1HESC@1.16261,HELAS3@1.88185,HEPG2@3.06612,HMEC@1.23098,HSMM@1.83561,HUVEC@2.3708,K562@4.09816,MCF7@0,NHEK@1.93753,NHLF@0.60005,SKNSHRA@3.32477, 0 0 0 0 ENSG00000213963.2 ENST00000447413.1 chr2:178186335-178257409 6 1176 69888 exonic -1.90 0 1,1,1 1 0,0,0 17.2253401360544 5.60981856684982 140.594 30.8835034013605 7.95964972527472 178.753 35.6207482993197 23.4268543956044 162.367 0 0 chimp,human,macaque,marmoset,orangutan, processed_transcript processed_transcript A549@2.54216,AG04450@1.32256,BJ@2.03382,GM12878@2.26367,H1HESC@1.16261,HELAS3@1.88185,HEPG2@3.06612,HMEC@1.23098,HSMM@1.83561,HUVEC@2.3708,K562@4.09816,MCF7@0,NHEK@1.93753,NHLF@0.60005,SKNSHRA@3.32477, 0 0 0 0 ENSG00000237655.1 ENST00000357045.4 chr2:178467817-178483300 3 587 14892 exonic 14.42 0 0,0,1 0 0,0,0 366.134582623509 67.5654042438893 0 435.732538330494 73.11952726296 0 440.402044293015 78.9475557346226 0 0 0 cat,chimp,cow,dog,elephant,guinea_pig,horse,human,macaque,marmoset,mouse,opossum,orangutan,panda,pig,rabbit,rat, lincRNA processed_transcript A549@0.005716,AG04450@0,BJ@0,GM12878@0.036918,H1HESC@0,HELAS3@0.0707475,HEPG2@0.130303,HMEC@0,HSMM@0,HUVEC@0.118475,K562@0,MCF7@0.005203,NHEK@0.0330197,NHLF@0.061614,SKNSHRA@0.0804405, 0 0 0 0 ENSG00000229941.1 ENST00000412133.1 chr2:178563157-178588017 4 737 24117 exonic 3.08 0 0,0,1 0 0,0,0 94.6811397557666 56.8785089356056 8.352 93.1614654002714 54.8860969440643 25.942 119.814111261872 52.6940747190778 15.509 0 0 chimp,guinea_pig,human,macaque,marmoset,orangutan,panda,rabbit, antisense antisense A549@0,AG04450@0,BJ@0,GM12878@0.004301,H1HESC@0,HELAS3@0,HEPG2@0.002936,HMEC@0,HSMM@0,HUVEC@0,K562@0.0561005,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0.0227005, 0 0 0 0 ENSG00000229941.1 ENST00000450227.1 chr2:178563218-178588017 3 542 24253 intronic -1.99 0 0,0,1 0 0,0,0 78.1180811808118 57.7025110295634 0 47.8819188191882 56.3392569991341 1.736 60.0018450184502 54.6985939883726 2.385 0 0 chimp,elephant,guinea_pig,human,macaque,marmoset,orangutan,panda,rabbit, antisense antisense A549@0,AG04450@0,BJ@0,GM12878@0.004301,H1HESC@0,HELAS3@0,HEPG2@0.002936,HMEC@0,HSMM@0,HUVEC@0,K562@0.0561005,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0.0227005, 0 0 0 0 ENSG00000236664.1 ENST00000457053.1 chr2:178817838-178876716 2 252 58624 intronic -7.62 0 0,0,1 0 0,0,0 0 7.30473867358079 0 0 16.243552128821 1.578 0 36.729752319869 1.704 0 0 chimp,elephant,human,macaque,marmoset,orangutan, processed_transcript processed_transcript A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0.031272,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000223960.1 ENST00000420672.1 chr2:179278666-179295551 3 487 16394 intergenic -1.71 0 0,1,0 1 0,0,0 0 2.52500914968891 0 6.80082135523614 2.25088446992802 0 6.99794661190965 3.23368305477614 0 0 0 cat,chimp,cow,dog,elephant,human,macaque,marmoset,orangutan,panda,pig, lincRNA processed_transcript A549@5.79397,AG04450@3.12354,BJ@2.91876,GM12878@12.7342,H1HESC@2.97376,HELAS3@7.41772,HEPG2@0.831107,HMEC@3.48925,HSMM@5.60891,HUVEC@4.25154,K562@8.52749,MCF7@0.785981,NHEK@5.88574,NHLF@2.98628,SKNSHRA@4.4718, 0 0 0 0 ENSG00000223960.1 ENST00000454488.1 chr2:179278672-179298242 4 559 19005 intronic -0.82 0 1,1,1 1 0,0,0 0 10.06287818995 0 0 12.3703235990529 0 0 15.6989739542226 0 0 0 chimp,human,macaque,orangutan, lincRNA processed_transcript A549@5.79397,AG04450@3.12354,BJ@2.91876,GM12878@12.7342,H1HESC@2.97376,HELAS3@7.41772,HEPG2@0.831107,HMEC@3.48925,HSMM@5.60891,HUVEC@4.25154,K562@8.52749,MCF7@0.785981,NHEK@5.88574,NHLF@2.98628,SKNSHRA@4.4718, 0 0 0 0 ENSG00000223960.1 ENST00000450044.1 chr2:179278695-179296068 4 789 16578 intergenic -2.70 1 0,1,0 1 0,0,0 0 2.49698395463868 0 4.33333333333333 2.42568464229702 0 4.48162230671736 3.40336590662324 0 0 0 chimp,human,macaque,marmoset,orangutan, lincRNA processed_transcript A549@5.79397,AG04450@3.12354,BJ@2.91876,GM12878@12.7342,H1HESC@2.97376,HELAS3@7.41772,HEPG2@0.831107,HMEC@3.48925,HSMM@5.60891,HUVEC@4.25154,K562@8.52749,MCF7@0.785981,NHEK@5.88574,NHLF@2.98628,SKNSHRA@4.4718, 0 0 0 0 ENSG00000223960.1 ENST00000442036.1 chr2:179278714-179283850 2 738 4396 intergenic -7.07 0 0,1,1 1 0,0,0 0 0 0 0 1.04276615104641 0 0 1.10100090991811 0 0 0 chimp,dog,human,macaque,marmoset,orangutan,panda,pig, lincRNA processed_transcript A549@5.79397,AG04450@3.12354,BJ@2.91876,GM12878@12.7342,H1HESC@2.97376,HELAS3@7.41772,HEPG2@0.831107,HMEC@3.48925,HSMM@5.60891,HUVEC@4.25154,K562@8.52749,MCF7@0.785981,NHEK@5.88574,NHLF@2.98628,SKNSHRA@4.4718, 0 0 0 0 ENSG00000223960.1 ENST00000453026.1 chr2:179278721-179303866 5 898 24239 intronic 1.82 0 0,1,0 1 0,0,0 0 14.5437105491151 0 0 15.1176616197038 0 0 18.1789677791988 0 0 0 chimp,human,macaque,orangutan, lincRNA processed_transcript A549@5.79397,AG04450@3.12354,BJ@2.91876,GM12878@12.7342,H1HESC@2.97376,HELAS3@7.41772,HEPG2@0.831107,HMEC@3.48925,HSMM@5.60891,HUVEC@4.25154,K562@8.52749,MCF7@0.785981,NHEK@5.88574,NHLF@2.98628,SKNSHRA@4.4718, 0 0 0 0 ENSG00000223960.1 ENST00000436616.1 chr2:179278726-179298716 3 915 19071 intronic -2.70 0 0,1,0 1 0,0,0 0 10.0280530648629 0 2.0896174863388 12.3275129778197 0 2.19453551912568 15.6446436998584 0 0 0 cat,chimp,horse,human,macaque,marmoset,orangutan,pig, lincRNA processed_transcript A549@5.79397,AG04450@3.12354,BJ@2.91876,GM12878@12.7342,H1HESC@2.97376,HELAS3@7.41772,HEPG2@0.831107,HMEC@3.48925,HSMM@5.60891,HUVEC@4.25154,K562@8.52749,MCF7@0.785981,NHEK@5.88574,NHLF@2.98628,SKNSHRA@4.4718, 0 0 0 0 ENSG00000223960.1 ENST00000415236.1 chr2:179278750-179297009 4 658 17595 exonic 1.82 0 1,1,1 1 0,0,0 57.0455927051672 8.71503267973856 0 94.8328267477204 9.71059960215971 0 92.4589665653495 12.9472577436772 0 0 0 chimp,dog,human,macaque,orangutan, lincRNA processed_transcript A549@5.79397,AG04450@3.12354,BJ@2.91876,GM12878@12.7342,H1HESC@2.97376,HELAS3@7.41772,HEPG2@0.831107,HMEC@3.48925,HSMM@5.60891,HUVEC@4.25154,K562@8.52749,MCF7@0.785981,NHEK@5.88574,NHLF@2.98628,SKNSHRA@4.4718, 0 0 0 0 ENSG00000237298.1 ENST00000419746.1 chr2:179387554-179470132 17 4575 77971 exonic 9.01 1 0,0,1 0 0,0,0 411.865792349727 467.062125662105 0 421.018142076503 364.329840581755 0 426.031693989071 371.371509920355 2.43 0 0 cat,chimp,cow,dog,elephant,guinea_pig,horse,human,macaque,marmoset,opossum,orangutan,panda,pig,rabbit, lincRNA processed_transcript A549@11.5073,AG04450@11.7032,BJ@14.4932,GM12878@42.3134,H1HESC@20.4452,HELAS3@14.5455,HEPG2@9.02778,HMEC@3.94283,HSMM@5.18488,HUVEC@15.9059,K562@42.1011,MCF7@12.7803,NHEK@16.9842,NHLF@11.277,SKNSHRA@42.9968, 0 0 0 0 ENSG00000237298.1 ENST00000456053.1 chr2:179387951-179484941 7 2026 94952 exonic 4.19 0 1,1,1 1 0,0,0 318.638696939783 435.912271463476 0 320.480750246792 359.302394894262 0 332.748766041461 364.511490016007 2.43 0 0 cat,chimp,cow,dog,elephant,guinea_pig,horse,human,macaque,marmoset,mouse,orangutan,panda,pig,rabbit,rat, lincRNA processed_transcript A549@11.5073,AG04450@11.7032,BJ@14.4932,GM12878@42.3134,H1HESC@20.4452,HELAS3@14.5455,HEPG2@9.02778,HMEC@3.94283,HSMM@5.18488,HUVEC@15.9059,K562@42.1011,MCF7@12.7803,NHEK@16.9842,NHLF@11.277,SKNSHRA@42.9968, 0 0 0 0 ENSG00000237298.1 ENST00000442329.1 chr2:179388221-179400579 3 526 11828 exonic -4.86 0 0,0,1 0 0,0,0 504.045627376426 400.733006425431 0 330.707224334601 339.282296246195 0 301.334600760456 324.844183293879 2.43 0 0 cat,chimp,cow,dog,elephant,guinea_pig,horse,human,macaque,marmoset,mouse,opossum,orangutan,panda,pig,platypus,rabbit,rat, lincRNA processed_transcript A549@11.5073,AG04450@11.7032,BJ@14.4932,GM12878@42.3134,H1HESC@20.4452,HELAS3@14.5455,HEPG2@9.02778,HMEC@3.94283,HSMM@5.18488,HUVEC@15.9059,K562@42.1011,MCF7@12.7803,NHEK@16.9842,NHLF@11.277,SKNSHRA@42.9968, 0 0 0 0 ENSG00000237298.1 ENST00000431259.1 chr2:179388226-179402395 5 650 13511 exonic -4.86 0 0,0,0 0 0,0,0 505.686153846154 409.520834875287 0 374.264615384615 353.244985567316 0 345.103076923077 335.034564428984 2.43 0 0 cat,chimp,cow,dog,elephant,guinea_pig,horse,human,macaque,marmoset,mouse,opossum,orangutan,panda,pig,rabbit,rat, lincRNA processed_transcript A549@11.5073,AG04450@11.7032,BJ@14.4932,GM12878@42.3134,H1HESC@20.4452,HELAS3@14.5455,HEPG2@9.02778,HMEC@3.94283,HSMM@5.18488,HUVEC@15.9059,K562@42.1011,MCF7@12.7803,NHEK@16.9842,NHLF@11.277,SKNSHRA@42.9968, 0 0 0 0 ENSG00000237298.1 ENST00000450692.1 chr2:179400457-179403649 3 409 2779 exonic 3.48 0 0,1,1 0 0,0,0 523.339853300733 386.792011514933 808 544.977995110024 369.114069809284 744.778 554.484107579462 349.079884850666 627.511 0 0 cat,chimp,cow,dog,elephant,guinea_pig,horse,human,macaque,marmoset,mouse,opossum,orangutan,panda,pig,platypus,rabbit,rat, lincRNA processed_transcript A549@11.5073,AG04450@11.7032,BJ@14.4932,GM12878@42.3134,H1HESC@20.4452,HELAS3@14.5455,HEPG2@9.02778,HMEC@3.94283,HSMM@5.18488,HUVEC@15.9059,K562@42.1011,MCF7@12.7803,NHEK@16.9842,NHLF@11.277,SKNSHRA@42.9968, 0 0 0 0 ENSG00000237298.1 ENST00000415561.1 chr2:179402114-179403631 3 436 1077 exonic 3.48 0 0,0,1 0 0,0,0 522.832568807339 265.902506963788 415.161 546.114678899083 246.232126276695 353.438 574.149082568807 258.786443825441 330.095 0 0 cat,chimp,cow,dog,elephant,guinea_pig,horse,human,macaque,marmoset,mouse,opossum,orangutan,panda,pig,platypus,rabbit,rat, lincRNA processed_transcript A549@11.5073,AG04450@11.7032,BJ@14.4932,GM12878@42.3134,H1HESC@20.4452,HELAS3@14.5455,HEPG2@9.02778,HMEC@3.94283,HSMM@5.18488,HUVEC@15.9059,K562@42.1011,MCF7@12.7803,NHEK@16.9842,NHLF@11.277,SKNSHRA@42.9968, 0 0 0 0 ENSG00000237298.1 ENST00000438095.1 chr2:179404843-179447390 4 432 42109 exonic 4.19 0 0,0,0 0 0,0,0 414.587962962963 569.328623334679 436.078 401.108796296296 408.381082428935 459.866 383.861111111111 418.215702106438 469.183 0 0 cat,chimp,cow,dog,elephant,guinea_pig,horse,human,macaque,marmoset,mouse,opossum,orangutan,panda,pig,platypus,rabbit,rat, lincRNA processed_transcript A549@11.5073,AG04450@11.7032,BJ@14.4932,GM12878@42.3134,H1HESC@20.4452,HELAS3@14.5455,HEPG2@9.02778,HMEC@3.94283,HSMM@5.18488,HUVEC@15.9059,K562@42.1011,MCF7@12.7803,NHEK@16.9842,NHLF@11.277,SKNSHRA@42.9968, 0 0 0 0 ENSG00000234483.1 ENST00000418062.1 chr2:179501287-179510650 3 541 8818 exonic 2.22 0 0,0,1 0 0,0,0 177.670979667283 43.0970741664777 292.566 163.097966728281 55.3280789294625 283.217 124.207024029575 52.1334769789068 290.514 0 0 cat,chimp,cow,dog,elephant,guinea_pig,horse,human,macaque,marmoset,mouse,opossum,orangutan,panda,pig,platypus,rabbit,rat, antisense antisense A549@0.0347985,AG04450@0,BJ@0,GM12878@0.169372,H1HESC@0.0819265,HELAS3@0.0385125,HEPG2@0.052686,HMEC@0,HSMM@0,HUVEC@0.0048865,K562@0.0184905,MCF7@0,NHEK@0,NHLF@0.0031685,SKNSHRA@0.0906, 0 0 0 0 ENSG00000234483.1 ENST00000431752.1 chr2:179501302-179578965 2 607 77054 exonic 1.58 0 0,0,1 0 0,0,0 331.308072487644 57.571845718587 294.591 311.520593080725 84.2113193344927 285.917 299.678747940692 79.5156124276482 289.445 0 0 cat,chimp,cow,dog,elephant,guinea_pig,horse,human,macaque,marmoset,mouse,opossum,orangutan,panda,pig,platypus,rabbit,rat, antisense antisense A549@0.0347985,AG04450@0,BJ@0,GM12878@0.169372,H1HESC@0.0819265,HELAS3@0.0385125,HEPG2@0.052686,HMEC@0,HSMM@0,HUVEC@0.0048865,K562@0.0184905,MCF7@0,NHEK@0,NHLF@0.0031685,SKNSHRA@0.0906, 0 0 0 0 ENSG00000237477.1 ENST00000419129.1 chr2:180138558-180150434 2 550 11324 intergenic -1.10 0 0,1,0 0 0,0,0 0 0 113.958 0 0.209025079477217 124.38 0 0.264217590957259 121.446 0 0 chimp,human,macaque,marmoset,orangutan, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000225258.1 ENST00000429816.1 chr2:181436439-181557181 4 558 120178 intergenic -0.80 0 0,1,0 0 0,0,0 0 14.4625721845928 0 0 18.9625555426118 0 16.7956989247312 20.3090915142539 3.159 0 0 chimp,human, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0.0108135,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000236153.1 ENST00000428080.1 chr2:181844154-181844817 2 263 398 intronic -6.75 0 0,1,0 0 0,0,0 240.570342205323 23.427135678392 267.397 213.954372623574 0 224.443 196.098859315589 18.2286432160804 217.7 0 0 cat,chimp,cow,elephant,guinea_pig,horse,human,macaque,marmoset,orangutan,panda,rabbit,rat, antisense antisense A549@0,AG04450@0.008887,BJ@0.0226335,GM12878@0,H1HESC@0.044625,HELAS3@0.0157515,HEPG2@0.032841,HMEC@0,HSMM@0,HUVEC@0,K562@0.224955,MCF7@0.070757,NHEK@0.018486,NHLF@0.02937,SKNSHRA@0.020987, 0 0 0 0 ENSG00000238171.1 ENST00000456895.1 chr2:181940778-181970695 6 827 29080 intergenic -3.85 0 0,0,0 0 0,0,0 35.0447400241838 5.23112104539202 350.406 13.3494558645707 7.6845598349381 372.115 17.3808948004837 8.1052613480055 336.623 0 0 cat,chimp,dog,elephant,guinea_pig,horse,human,macaque,marmoset,orangutan,pig,rabbit, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0.006544,MCF7@0.0024135,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000234663.1 ENST00000414750.1 chr2:181966659-182056780 5 386 89727 intergenic 0.15 1 0,0,0 0 0,0,0 46.259067357513 24.1637745606116 0 36.139896373057 27.1730136971034 6.453 33.5077720207254 27.3101519052236 6.777 0 0 chimp,cow,elephant,human,macaque,marmoset,orangutan,rabbit, lincRNA lincRNA A549@0.0012255,AG04450@0,BJ@0.0094715,GM12878@0.127476,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0.011938,HSMM@0.034928,HUVEC@0.0059205,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0.0168745, 0 0 0 0 ENSG00000234663.1 ENST00000424170.1 chr2:181988562-182204503 6 680 215251 intergenic 3.11 0 0,1,1 0 0,0,0 53.6117647058824 17.8194340560555 0 33.5558823529412 21.441252305448 2.94 45.1544117647059 22.2353670830798 3.4 0 0 cat,chimp,cow,dog,elephant,guinea_pig,horse,human,macaque,marmoset,mouse,orangutan,panda,rabbit,rat, lincRNA lincRNA A549@0.0012255,AG04450@0,BJ@0.0094715,GM12878@0.127476,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0.011938,HSMM@0.034928,HUVEC@0.0059205,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0.0168745, 0 0 0 0 ENSG00000234663.1 ENST00000435411.1 chr2:181988564-182264286 5 1766 273948 intergenic 3.33 0 0,1,0 0 0,0,0 20.643261608154 21.0310569889176 0 34.8312570781427 25.4274497349862 3.528 42.2593431483579 26.2726904376013 4.08 0 0 cat,chimp,cow,dog,elephant,guinea_pig,horse,human,macaque,marmoset,mouse,orangutan,panda,pig,rabbit, lincRNA lincRNA A549@0.0012255,AG04450@0,BJ@0.0094715,GM12878@0.127476,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0.011938,HSMM@0.034928,HUVEC@0.0059205,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0.0168745, 0 0 0 0 ENSG00000234663.1 ENST00000428474.1 chr2:181988623-182227638 4 507 238502 intergenic 3.11 0 1,1,1 0 0,0,0 61.6331360946746 19.1669294177827 4.836 33.5029585798817 22.318651415921 6.03 36.2090729783037 23.3708648145508 10.337 0 0 cat,chimp,elephant,guinea_pig,horse,human,macaque,marmoset,orangutan,rabbit, lincRNA lincRNA A549@0.0012255,AG04450@0,BJ@0.0094715,GM12878@0.127476,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0.011938,HSMM@0.034928,HUVEC@0.0059205,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0.0168745, 0 0 0 0 ENSG00000234663.1 ENST00000424655.1 chr2:181988669-182207038 4 338 218025 intergenic 3.11 0 0,1,0 0 0,0,0 41.8224852071006 17.8091640866873 21.948 33.2485207100592 21.5163765623208 11.715 33.0591715976331 22.6185483316134 17.494 0 0 cat,chimp,horse,human,macaque,marmoset,orangutan, lincRNA lincRNA A549@0.0012255,AG04450@0,BJ@0.0094715,GM12878@0.127476,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0.011938,HSMM@0.034928,HUVEC@0.0059205,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0.0168745, 0 0 0 0 ENSG00000226681.1 ENST00000456446.1 chr2:182286881-182290476 2 531 3062 intergenic -1.27 0 0,0,0 0 0,0,0 0 0 0 0 2.76779882429784 0 4.25423728813559 5.56564337034618 0 0 0 chimp,human,macaque,marmoset,orangutan, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000234595.1 ENST00000440371.1 chr2:182547840-182550434 2 633 1959 intergenic -3.14 0 0,1,0 0 0,0,0 9.08372827804107 119.507401735579 0 13.2669826224329 124.641653905054 14.2 17.2116903633491 122.785094435937 15.675 0 0 cat,chimp,horse,human,macaque,marmoset,orangutan,panda,pig,rabbit, antisense antisense A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0.019337,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000225570.1 ENST00000449835.1 chr2:182555107-182558142 2 983 2050 intergenic 0.38 0 0,1,0 0 0,0,0 0 0 0 0 1.86536585365854 0 0 2.02146341463415 0 0 0 chimp,dog,human,macaque,orangutan,panda,rabbit, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000224643.1 ENST00000444562.1 chr2:183948133-183973247 3 424 24686 exonic -1.52 0 0,0,0 0 0,0,0 20.6084905660377 8.53479705096006 0 56.7429245283019 11.0556185692295 0 61.1580188679245 16.7439844446245 0 0 0 chimp,cow,dog,elephant,horse,human,macaque,orangutan,pig, antisense antisense A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000224643.1 ENST00000413954.1 chr2:183960151-183972431 2 380 11898 exonic -0.77 0 0,0,0 0 0,0,0 190.347368421053 2.92813918305598 0 210.415789473684 1.41116153975458 0 194.628947368421 12.5400907715582 7.776 0 0 chimp,elephant,human, antisense antisense A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000234172.1 ENST00000441026.1 chr2:184769256-184813839 3 470 44109 intergenic -1.26 0 0,0,0 0 0,0,0 38.936170212766 3.0308327098778 48.184 30.836170212766 6.32050148495772 5.497 29.6510638297872 6.66390079122175 5.957 0 0 cat,chimp,cow,dog,elephant,guinea_pig,horse,human,macaque,marmoset,orangutan,rabbit,rat, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000226747.2 ENST00000421998.1 chr2:186584601-186603448 4 1175 17666 exonic -3.30 0 0,1,1 0 0,0,0 0 1.25608513528812 0 0 1.98279180346428 47.99 0 2.70208309747538 49.382 0 0 chimp,guinea_pig,horse,human,macaque,marmoset,opossum,orangutan,pig,rabbit, lincRNA processed_transcript A549@0,AG04450@0.013454,BJ@0,GM12878@0.025132,H1HESC@0,HELAS3@0,HEPG2@0.0268575,HMEC@0,HSMM@0,HUVEC@0.002524,K562@0,MCF7@0,NHEK@0.00579067,NHLF@0,SKNSHRA@0.003852, 0 0 0 0 ENSG00000226747.2 ENST00000427269.2 chr2:186584939-186605206 3 716 19547 intronic -3.30 0 0,0,0 0 0,0,0 0 1.13521256458792 0 0 4.24709674118791 3.224 0 4.96838389522689 3.367 0 0 cat,chimp,dog,guinea_pig,horse,human,macaque,marmoset,orangutan,pig,rabbit, lincRNA processed_transcript A549@0,AG04450@0.013454,BJ@0,GM12878@0.025132,H1HESC@0,HELAS3@0,HEPG2@0.0268575,HMEC@0,HSMM@0,HUVEC@0.002524,K562@0,MCF7@0,NHEK@0.00579067,NHLF@0,SKNSHRA@0.003852, 0 0 0 0 ENSG00000226747.2 ENST00000437717.1 chr2:186600789-186603752 3 260 2699 exonic 0 0 0,1,0 0 0,0,0 0 0 0 58.9730769230769 1.79177473138199 27.418 61 0.981474620229715 30.49 0 0 chimp,cow,horse,human,macaque,marmoset,orangutan,rat, lincRNA processed_transcript A549@0,AG04450@0.013454,BJ@0,GM12878@0.025132,H1HESC@0,HELAS3@0,HEPG2@0.0268575,HMEC@0,HSMM@0,HUVEC@0.002524,K562@0,MCF7@0,NHEK@0.00579067,NHLF@0,SKNSHRA@0.003852, 0 0 0 0 ENSG00000231646.1 ENST00000436557.1 chr2:186648418-186664877 3 686 15769 exonic -6.07 1 0,0,0 0 0,0,0 18.0758017492711 31.7795040903038 0 48.8075801749271 67.7703088337878 84.831 46.9679300291545 76.4061132601941 104.906 0 0 cat,chimp,cow,dog,elephant,guinea_pig,horse,human,macaque,marmoset,mouse,orangutan,panda,pig,rabbit,rat, antisense antisense A549@0.0209305,AG04450@0.003253,BJ@0.008705,GM12878@0.247714,H1HESC@0.0232735,HELAS3@0.0462145,HEPG2@0.224276,HMEC@0,HSMM@0.0029865,HUVEC@0.003529,K562@0.099956,MCF7@0.0089525,NHEK@0.010854,NHLF@0,SKNSHRA@0.117036, 0 0 0 0 ENSG00000231646.1 ENST00000429929.1 chr2:186652747-186664878 3 437 11690 exonic -2.13 1 0,0,0 0 0,0,0 28.3752860411899 40.7041060735671 0 76.6178489702517 90.3384088964927 84.568 73.7299771167048 101.952609067579 104.606 0 0 cat,chimp,cow,dog,elephant,guinea_pig,horse,human,macaque,marmoset,orangutan,panda,pig,rabbit,rat, antisense antisense A549@0.0209305,AG04450@0.003253,BJ@0.008705,GM12878@0.247714,H1HESC@0.0232735,HELAS3@0.0462145,HEPG2@0.224276,HMEC@0,HSMM@0.0029865,HUVEC@0.003529,K562@0.099956,MCF7@0.0089525,NHEK@0.010854,NHLF@0,SKNSHRA@0.117036, 0 0 0 0 ENSG00000237877.1 ENST00000456653.1 chr2:186897872-186947960 3 822 49262 intergenic -7.89 0 1,1,1 0 0,0,0 188.54501216545 20.1886849904592 0 247.369829683698 21.8906459339856 0 200.026763990268 23.8379481141651 0 0 0 chimp,cow,dog,elephant,guinea_pig,horse,human,macaque,marmoset,mouse,opossum,orangutan,panda,pig,rabbit,rat, lincRNA lincRNA A549@0.089417,AG04450@0.106119,BJ@0.0509915,GM12878@0.573721,H1HESC@0.060857,HELAS3@0.145855,HEPG2@0.295223,HMEC@0,HSMM@0.0094245,HUVEC@0.044726,K562@0.0786015,MCF7@0.067746,NHEK@0.0781387,NHLF@0.0154365,SKNSHRA@0.122249, 0 0 0 0 ENSG00000237877.1 ENST00000427108.1 chr2:186898222-186946072 5 690 47152 intergenic -1.54 0 0,0,0 0 0,0,0 94.9231884057971 21.0921063793689 0 106.007246376812 22.7767008822531 0 125.131884057971 24.4839879538514 0 0 0 chimp,cow,dog,elephant,guinea_pig,horse,human,macaque,marmoset,mouse,opossum,orangutan,panda,pig,rabbit,rat, lincRNA lincRNA A549@0.089417,AG04450@0.106119,BJ@0.0509915,GM12878@0.573721,H1HESC@0.060857,HELAS3@0.145855,HEPG2@0.295223,HMEC@0,HSMM@0.0094245,HUVEC@0.044726,K562@0.0786015,MCF7@0.067746,NHEK@0.0781387,NHLF@0.0154365,SKNSHRA@0.122249, 0 0 0 0 ENSG00000237877.1 ENST00000419719.1 chr2:186898258-186947950 5 582 49102 intergenic 0 0 0,1,0 0 0,0,0 112.537800687285 20.2544702863427 0 118.101374570447 21.9619771088754 0 118.128865979381 23.8454645431958 0 0 0 chimp,cow,dog,elephant,guinea_pig,horse,human,macaque,marmoset,mouse,orangutan,panda,pig,rabbit,rat, lincRNA lincRNA A549@0.089417,AG04450@0.106119,BJ@0.0509915,GM12878@0.573721,H1HESC@0.060857,HELAS3@0.145855,HEPG2@0.295223,HMEC@0,HSMM@0.0094245,HUVEC@0.044726,K562@0.0786015,MCF7@0.067746,NHEK@0.0781387,NHLF@0.0154365,SKNSHRA@0.122249, 0 0 0 0 ENSG00000227227.1 ENST00000453665.1 chr2:187506066-187560014 3 568 53376 exonic -3.25 0 0,1,0 0 0,0,0 180.93661971831 20.3310851318945 51.12 157.660211267606 27.2387964628297 69.727 154.116197183099 29.0772069844125 57.993 0 0 chimp,cow,elephant,horse,human,macaque,marmoset,mouse,orangutan,pig,platypus,rabbit,rat, antisense antisense A549@0.009238,AG04450@0.05164,BJ@0.0241225,GM12878@0,H1HESC@0,HELAS3@0.029845,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0.007954, 0 0 0 0 ENSG00000224063.1 ENST00000453517.1 chr2:187867947-188392007 4 798 523256 intronic -4.98 0 0,1,0 1 0,0,0 23.922305764411 5.32930726069075 0 12.1228070175439 7.80225931475224 0 169.827067669173 9.54515380616754 849 0 0 chimp,cow,dog,elephant,guinea_pig,horse,human,macaque,marmoset,mouse,opossum,orangutan,panda,pig,platypus,rabbit,rat, processed_transcript processed_transcript A549@0.0402805,AG04450@0.0346905,BJ@0.004461,GM12878@0,H1HESC@0.007411,HELAS3@0.442709,HEPG2@3.01372,HMEC@0,HSMM@0.004964,HUVEC@0,K562@0.072027,MCF7@0,NHEK@0.0536853,NHLF@0.0023275,SKNSHRA@0, 0 0 0 0 ENSG00000224063.1 ENST00000412276.1 chr2:187868001-188419120 7 822 550285 exonic 4.09 0 0,1,1 1 0,0,0 0 5.17959966199333 0 4.7639902676399 7.62519603478198 0 105.866180048662 9.3159871702845 849 0 0 cat,chimp,cow,elephant,guinea_pig,horse,human,macaque,marmoset,mouse,opossum,orangutan,pig,rabbit, processed_transcript processed_transcript A549@0.0402805,AG04450@0.0346905,BJ@0.004461,GM12878@0,H1HESC@0.007411,HELAS3@0.442709,HEPG2@3.01372,HMEC@0,HSMM@0.004964,HUVEC@0,K562@0.072027,MCF7@0,NHEK@0.0536853,NHLF@0.0023275,SKNSHRA@0, 0 0 0 0 ENSG00000224063.1 ENST00000428329.1 chr2:188418876-188419390 3 245 265 exonic 0 0 0,1,0 0 0,0,0 0 104.079245283019 26.64 0 99.4867924528302 55.133 30.5102040816327 115.211320754717 50.634 0 0 cat,chimp,elephant,horse,human,macaque,marmoset,orangutan,panda,pig, processed_transcript processed_transcript A549@0.0402805,AG04450@0.0346905,BJ@0.004461,GM12878@0,H1HESC@0.007411,HELAS3@0.442709,HEPG2@3.01372,HMEC@0,HSMM@0.004964,HUVEC@0,K562@0.072027,MCF7@0,NHEK@0.0536853,NHLF@0.0023275,SKNSHRA@0, 0 0 0 0 ENSG00000231689.1 ENST00000434418.1 chr2:188577543-189152418 4 556 574313 intergenic 5.53 0 0,1,0 1 0,0,0 0 2.13619576781302 0 0 2.80841109290579 4.05 0 6.25474436413593 4.17 0 0 chimp,human,macaque,orangutan, lincRNA lincRNA A549@0.002464,AG04450@0.00366,BJ@0.003673,GM12878@0,H1HESC@0.690079,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@3.49092,MCF7@0.002282,NHEK@0,NHLF@0.0043805,SKNSHRA@0.007789, 0 0 0 0 ENSG00000231689.1 ENST00000415357.1 chr2:189092547-189152361 2 879 58933 intergenic 2.67 0 0,1,0 1 0,0,0 0 1.07262484516315 0 40.1843003412969 1.4315239339589 4.05 366.15244596132 2.43320380771385 4.17 0 0 chimp,cow,dog,elephant,guinea_pig,horse,human,macaque,marmoset,mouse,opossum,orangutan,panda,pig,rabbit,rat, lincRNA lincRNA A549@0.002464,AG04450@0.00366,BJ@0.003673,GM12878@0,H1HESC@0.690079,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@3.49092,MCF7@0.002282,NHEK@0,NHLF@0.0043805,SKNSHRA@0.007789, 0 0 0 0 ENSG00000223523.1 ENST00000431708.1 chr2:189463518-189704171 8 789 239850 intronic -1.30 0 0,0,0 0 0,0,0 64.8441064638783 5.41969981238274 0 55.7946768060837 5.1888221805295 0 55.1128010139417 7.32311861580155 0 0 0 chimp,cow,elephant,horse,human,macaque,marmoset,orangutan,pig, processed_transcript processed_transcript A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000228073.1 ENST00000419029.1 chr2:189959789-189960884 2 395 698 intronic -2.60 0 0,0,0 0 0,0,0 0 0 0 0 2.73925501432665 6.161 0 2.87679083094556 6.44 0 0 cat,chimp,cow,human,marmoset,orangutan,panda,rabbit, antisense antisense A549@0.0054675,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000253559.1 ENST00000520651.1 chr2:190627430-190630282 3 505 2343 exonic 3.85 0 0,1,1 0 0,0,0 0 7.80409731113956 0 10.4851485148515 0 1.984 10.4554455445545 0 2.072 0 1 chimp,human,macaque,orangutan, antisense antisense A549@0.381217,AG04450@0.05694,BJ@0.112375,GM12878@0.280908,H1HESC@0.102108,HELAS3@0.440483,HEPG2@0.420617,HMEC@0.069464,HSMM@0.0484245,HUVEC@0.182839,K562@0.329764,MCF7@0.097747,NHEK@0.0928063,NHLF@0.0516665,SKNSHRA@0.210667, 0 0 0 0 ENSG00000253559.1 ENST00000521819.1 chr2:190627547-190629952 2 542 1861 exonic -2.05 0 0,1,0 1 0,0,0 0 9.82536270822139 0 0 0 7.279 0 0 7.352 1 1 chimp,human,macaque,marmoset,orangutan, antisense antisense A549@0.381217,AG04450@0.05694,BJ@0.112375,GM12878@0.280908,H1HESC@0.102108,HELAS3@0.440483,HEPG2@0.420617,HMEC@0.069464,HSMM@0.0484245,HUVEC@0.182839,K562@0.329764,MCF7@0.097747,NHEK@0.0928063,NHLF@0.0516665,SKNSHRA@0.210667, 0 0 0 0 ENSG00000253559.1 ENST00000523895.1 chr2:190627565-190630053 2 565 1921 exonic -15.86 0 0,1,0 1 0,0,0 0 9.51847995835502 0 0 0 7.279 0 0 7.352 1 1 chimp,human,macaque,marmoset,orangutan, antisense antisense A549@0.381217,AG04450@0.05694,BJ@0.112375,GM12878@0.280908,H1HESC@0.102108,HELAS3@0.440483,HEPG2@0.420617,HMEC@0.069464,HSMM@0.0484245,HUVEC@0.182839,K562@0.329764,MCF7@0.097747,NHEK@0.0928063,NHLF@0.0516665,SKNSHRA@0.210667, 1 96 0 0 ENSG00000233654.1 ENST00000457407.1 chr2:191399581-191432828 3 401 32842 intergenic -3.92 0 0,1,0 1 0,0,0 0 7.13510139455575 9.2 0 4.96869861762378 12.923 0 5.30470129711954 15.295 0 0 cat,chimp,human,macaque,marmoset,orangutan, antisense antisense A549@0.642894,AG04450@0.0411785,BJ@0.0601785,GM12878@0.371417,H1HESC@0.172436,HELAS3@0.450584,HEPG2@0.24067,HMEC@0.162163,HSMM@0.0107355,HUVEC@0.137949,K562@0.439197,MCF7@0.0724495,NHEK@0.06318,NHLF@0.038316,SKNSHRA@0.169554, 0 0 0 0 ENSG00000228509.1 ENST00000421437.1 chr2:191541670-191555098 3 805 12619 exonic -6.45 0 0,1,0 0 0,0,0 60.4608695652174 41.4205563039861 145.566 90.9217391304348 47.2611141928838 212.997 97.4062111801242 41.0320152151518 224.028 0 0 chimp,cow,dog,elephant,guinea_pig,horse,human,macaque,marmoset,mouse,opossum,orangutan,panda,pig, antisense antisense A549@0.0101405,AG04450@0,BJ@0.008856,GM12878@0.0252965,H1HESC@0,HELAS3@0.006411,HEPG2@0.012906,HMEC@0,HSMM@0.0127325,HUVEC@0,K562@0,MCF7@0,NHEK@0.00361767,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000228509.1 ENST00000411949.1 chr2:191541761-191573442 3 714 30963 intronic -2.58 0 0,0,0 0 0,0,0 0 43.4255724574492 0 0 53.5123211575106 0 0 51.1008623195427 0 0 0 chimp,cow,dog,elephant,guinea_pig,horse,human,macaque,marmoset,orangutan,panda,pig, antisense antisense A549@0.0101405,AG04450@0,BJ@0.008856,GM12878@0.0252965,H1HESC@0,HELAS3@0.006411,HEPG2@0.012906,HMEC@0,HSMM@0.0127325,HUVEC@0,K562@0,MCF7@0,NHEK@0.00361767,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000228509.1 ENST00000428032.1 chr2:191542023-191566272 3 453 23792 intronic 1.28 0 0,0,1 0 0,0,0 0 54.303253194351 0 0 69.1178127101547 0 0 65.9651563550773 0 0 0 chimp,cow,dog,elephant,horse,human,macaque,marmoset,orangutan,pig, antisense antisense A549@0.0101405,AG04450@0,BJ@0.008856,GM12878@0.0252965,H1HESC@0,HELAS3@0.006411,HEPG2@0.012906,HMEC@0,HSMM@0.0127325,HUVEC@0,K562@0,MCF7@0,NHEK@0.00361767,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000235852.1 ENST00000413911.1 chr2:191745523-191746785 2 917 343 exonic 22.04 0 0,1,1 1 0,0,0 149.935659760087 77.8425655976676 7.315 130.753544165758 129.734693877551 40.66 132.166848418757 107.469387755102 47.48 0 0 chimp,cow,dog,human,macaque,marmoset,mouse,orangutan,panda,rabbit,rat, antisense antisense A549@0.03217,AG04450@0.0554085,BJ@0.0839555,GM12878@0.274105,H1HESC@0.074815,HELAS3@0.12797,HEPG2@0.10669,HMEC@0.062377,HSMM@0.0443835,HUVEC@0.03714,K562@0.0961655,MCF7@0.035277,NHEK@0.0403,NHLF@0.027389,SKNSHRA@0.0478835, 0 0 0 0 ENSG00000230686.1 ENST00000431351.1 chr2:191882680-191883805 2 621 502 intronic -10.35 0 0,1,0 0 0,0,0 0 0 0 0 0 0 0 0 0 0 0 chimp,human,macaque,marmoset,orangutan, antisense antisense A549@0.008867,AG04450@0.004752,BJ@0,GM12878@0.078882,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0.012011,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0.0086345, 0 0 0 0 ENSG00000231858.1 ENST00000456176.1 chr2:191886252-191897040 3 383 10401 exonic 2.20 1 0,1,1 0 0,0,0 101.958224543081 4.43111239303913 0 129.955613577024 8.64522642053649 0 134.582245430809 9.14710124026536 0 0 0 cat,chimp,cow,elephant,horse,human,macaque,marmoset,mouse,opossum,orangutan,panda,pig,rat, antisense antisense A549@0,AG04450@0,BJ@0,GM12878@0.018009,H1HESC@0.0064105,HELAS3@0.0533635,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0.121833,K562@0.0060155,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000231858.1 ENST00000429796.1 chr2:191895477-191897040 2 488 1073 exonic 2.20 1 0,0,1 0 0,0,0 80.0204918032787 19.4147250698975 25.256 101.993852459016 40.5181733457595 29.669 105.625 38.0801491146319 23.844 0 0 cat,chimp,cow,dog,elephant,horse,human,macaque,marmoset,mouse,opossum,orangutan,panda,pig,rabbit, antisense retained_intron A549@0,AG04450@0,BJ@0,GM12878@0.018009,H1HESC@0.0064105,HELAS3@0.0533635,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0.121833,K562@0.0060155,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000227542.1 ENST00000419640.1 chr2:192093891-192110898 4 905 16096 intronic 4.92 0 0,1,0 0 0,0,0 11.6022099447514 25.2234716699801 32.7 58.8762430939227 23.76925944334 112.976 45.3259668508287 26.9785661033797 92.901 0 0 cat,chimp,elephant,horse,human,macaque,marmoset,orangutan,panda,pig, lincRNA lincRNA A549@0.951591,AG04450@1.04113,BJ@1.05592,GM12878@0,H1HESC@1.00605,HELAS3@0.486349,HEPG2@1.08516,HMEC@0.166668,HSMM@0.515524,HUVEC@0.20242,K562@0,MCF7@2.18397,NHEK@0.607166,NHLF@0.586777,SKNSHRA@1.63982, 0 0 0 0 ENSG00000225884.2 ENST00000413304.2 chr2:192658151-192684976 4 539 26280 intergenic -1.85 0 0,0,0 0 0,0,0 10.6122448979592 40.3821537290715 0 4.09647495361781 47.6052511415525 0 10.9090909090909 50.1947488584475 0 0 0 chimp,cow,dog,elephant,guinea_pig,horse,human,macaque,marmoset,mouse,orangutan,panda,pig,rabbit,rat, antisense antisense A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0.020078,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000233766.1 ENST00000424116.1 chr2:192711279-192901485 3 483 189719 exonic 10.22 0 0,1,0 1 0,0,0 242.372670807453 43.806455863672 189.203 294.372670807453 46.9124072971078 534.451 289.832298136646 49.7121848628761 541.319 0 0 cat,chimp,cow,dog,elephant,guinea_pig,horse,human,macaque,marmoset,mouse,opossum,orangutan,pig,rabbit,rat, antisense antisense A549@0.7457,AG04450@0.0104695,BJ@0,GM12878@0.009646,H1HESC@0,HELAS3@0.885325,HEPG2@2.83039,HMEC@0.025275,HSMM@0.111918,HUVEC@0.306442,K562@0.740093,MCF7@0,NHEK@0,NHLF@0.004015,SKNSHRA@0, 0 0 0 0 ENSG00000232452.1 ENST00000428980.1 chr2:192787272-192895368 2 558 107536 intronic 6.16 0 0,0,0 0 0,0,0 0 43.8825137628329 0 0 49.5786899270942 0 0 49.5193144621336 0 0 0 chimp,human,orangutan, antisense antisense A549@0.850103,AG04450@0.0139465,BJ@0.0319455,GM12878@0.0104445,H1HESC@0,HELAS3@0.483202,HEPG2@0.594635,HMEC@0,HSMM@0.191181,HUVEC@0.147955,K562@0.81296,MCF7@0.109634,NHEK@0.0139153,NHLF@0,SKNSHRA@0.019537, 0 0 0 0 ENSG00000229395.1 ENST00000414394.1 chr2:193494645-193510432 2 563 15222 intergenic -4.88 0 0,0,0 0 0,0,0 0 2.31099724083563 0 0 1.6793456838786 0 0 2.05314676126659 0 0 0 chimp,cow,dog,horse,human,macaque,marmoset,orangutan,panda,rabbit, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000232227.1 ENST00000433550.1 chr2:193508828-193510109 2 583 696 intergenic 0 1 0,0,0 0 0,0,0 60.3396226415094 0 0 34.9142367066895 0 0 37.1732418524871 0 0 0 0 chimp,cow,dog,elephant,guinea_pig,horse,human,macaque,marmoset,mouse,orangutan,panda,pig,rabbit,rat, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0.0670745,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000232227.1 ENST00000422017.1 chr2:193508828-193510113 2 624 659 intergenic 0 1 0,0,0 0 0,0,0 56.375 0 0 32.6201923076923 0 0 34.7307692307692 0 0 0 0 chimp,cow,dog,elephant,guinea_pig,horse,human,macaque,marmoset,mouse,orangutan,panda,pig,rabbit,rat, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0.0670745,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000227418.1 ENST00000454040.1 chr2:193614571-193641625 3 1587 25463 intergenic -1.52 1 1,1,1 0 0,0,0 57.4410838059231 11.067274083965 0 45.8462507876497 8.32737697836076 0 42.4858223062382 11.8053253740722 0 0 0 cat,chimp,cow,dog,elephant,guinea_pig,horse,human,macaque,marmoset,mouse,orangutan,panda,rabbit, processed_transcript processed_transcript A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0.019225,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000225539.1 ENST00000438505.1 chr2:195208993-195251230 5 877 41352 intergenic -3.25 0 0,0,0 0 0,0,0 0 3.94225188624492 0 7.36145952109464 6.63455213774424 0 7.60775370581528 6.9491923002515 0 0 0 cat,chimp,human,macaque,marmoset,orangutan,pig, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0.0420465,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0.0395195, 0 0 0 0 ENSG00000225539.1 ENST00000450848.1 chr2:195208993-195255651 5 620 46030 intergenic -3.25 0 0,0,0 0 0,0,0 0 3.74712144253748 0 10.4129032258065 7.15689767542907 0 10.7612903225806 7.1868563980013 0 0 0 cat,chimp,cow,dog,elephant,horse,human,macaque,marmoset,orangutan,pig,rabbit, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0.0420465,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0.0395195, 0 0 0 0 ENSG00000225539.1 ENST00000419786.1 chr2:195209006-195284369 6 1078 74275 intergenic -0.64 1 0,0,0 0 0,0,0 0 6.12803769774487 0 5.98886827458256 8.08533153820263 0 6.18923933209648 8.67522046449007 0 0 0 chimp,elephant,horse,human,macaque,marmoset,orangutan, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0.0420465,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0.0395195, 0 0 0 0 ENSG00000230173.1 ENST00000447194.1 chr2:195595319-195626159 4 2848 27986 intergenic -0.26 0 0,0,0 0 0,0,0 78.4803370786517 11.955727863932 0 86.4582162921348 22.8097977560209 0 76.6927668539326 22.508004002001 0 0 0 cat,chimp,cow,dog,horse,human,macaque,marmoset,orangutan,panda, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0.0145845,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0.001591, 0 0 0 0 ENSG00000235056.1 ENST00000418387.1 chr2:195868435-195891094 2 1026 21631 intergenic 2.51 0 0,0,0 0 0,0,0 54.1130604288499 12.1709121168693 0 35.8518518518518 20.038555776432 0 39.7212475633528 27.4647496648329 0 0 0 cat,chimp,cow,dog,elephant,guinea_pig,horse,human,macaque,marmoset,mouse,orangutan,panda,pig,rabbit,rat, lincRNA lincRNA A549@0.009581,AG04450@0.0043605,BJ@0,GM12878@0,H1HESC@0.0130375,HELAS3@0.020037,HEPG2@0.0079605,HMEC@0,HSMM@0.004003,HUVEC@0,K562@0,MCF7@0,NHEK@0.020233,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000224099.1 ENST00000413290.1 chr2:196313256-196343649 4 985 29402 intergenic 0.24 0 0,0,0 0 0,0,0 0 19.1027821236651 0 3.88223350253807 23.6899870757091 7.506 4.20710659898477 23.2803210665941 13.915 0 0 chimp,guinea_pig,human,macaque,marmoset,orangutan,pig,rabbit, lincRNA lincRNA A549@0.002195,AG04450@0.0023815,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0.0172345,HMEC@0,HSMM@0,HUVEC@0,K562@0.0948035,MCF7@0,NHEK@0.00262567,NHLF@0,SKNSHRA@0.009184, 0 0 0 0 ENSG00000223466.1 ENST00000452381.1 chr2:196397759-196403405 2 848 4796 intergenic 3.10 0 0,0,0 0 0,0,0 106.917452830189 52.0116763969975 24.966 116.69929245283 59.9364053377815 37.678 114.031839622642 58.5859049207673 35.914 0 0 cat,chimp,cow,dog,elephant,horse,human,macaque,marmoset,orangutan,panda,pig, lincRNA lincRNA A549@0.006499,AG04450@0.22339,BJ@0.138802,GM12878@0.172142,H1HESC@0,HELAS3@0.957788,HEPG2@0.0994825,HMEC@0.009634,HSMM@0.0949295,HUVEC@0,K562@0.0109265,MCF7@0.0141915,NHEK@0.00155333,NHLF@0.159539,SKNSHRA@0.0818415, 0 0 0 0 ENSG00000234919.1 ENST00000432711.1 chr2:196434352-196437694 2 553 2787 intergenic -2.56 0 0,0,1 0 0,0,0 0 4.05740940078938 0 0 25.4678866164334 28.583 0 33.7158234660926 35.831 0 0 cat,chimp,human,macaque,marmoset,orangutan, lincRNA lincRNA A549@0.004977,AG04450@0.01162,BJ@0,GM12878@0,H1HESC@0,HELAS3@0.0084225,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0.009648,MCF7@0,NHEK@0.011815,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000229056.1 ENST00000430904.1 chr2:197124748-197128283 3 765 2766 intronic 2.33 0 0,1,1 0 0,0,0 0 0 13.623 44.8483660130719 3.95914678235719 13.05 61.0091503267974 4.28922631959508 6.195 0 0 chimp,cow,elephant,horse,human,macaque,marmoset,opossum,orangutan,panda,pig,rabbit,rat, lincRNA processed_transcript A549@0.227513,AG04450@0.0871125,BJ@0.029454,GM12878@0.0459735,H1HESC@0,HELAS3@0.008862,HEPG2@0.266819,HMEC@0.105102,HSMM@0.332923,HUVEC@0.0529435,K562@1.5259,MCF7@0.002677,NHEK@0.0699147,NHLF@0.0281055,SKNSHRA@0.952159, 0 0 0 0 ENSG00000229056.1 ENST00000433933.1 chr2:197124838-197128928 2 1411 2677 intronic 1.55 0 1,1,1 0 0,0,0 0 0 13.623 20.9808646350106 4.09077325364214 21.04 76.8143160878809 4.43182667164737 12.503 0 0 chimp,cow,elephant,horse,human,macaque,marmoset,mouse,opossum,orangutan,panda,pig,rabbit, lincRNA processed_transcript A549@0.227513,AG04450@0.0871125,BJ@0.029454,GM12878@0.0459735,H1HESC@0,HELAS3@0.008862,HEPG2@0.266819,HMEC@0.105102,HSMM@0.332923,HUVEC@0.0529435,K562@1.5259,MCF7@0.002677,NHEK@0.0699147,NHLF@0.0281055,SKNSHRA@0.952159, 0 0 0 0 ENSG00000231621.1 ENST00000449346.1 chr2:198062715-198063997 2 453 827 exonic 3.56 0 1,1,1 0 0,0,0 0 0 0 17.916114790287 0 17.768 17.7439293598234 0 17.751 0 0 cat,chimp,cow,elephant,horse,human,macaque,marmoset,orangutan,panda, antisense antisense A549@0,AG04450@0,BJ@0,GM12878@0.131063,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0.0088375,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000236977.1 ENST00000428191.1 chr2:198115582-198167243 6 1063 50588 intronic -1.76 1 0,0,0 0 0,0,0 7.41956726246472 8.60781212935874 0 0 12.7600616747055 0 1.98965192850423 27.019411718194 0 0 0 chimp,horse,human,macaque,marmoset,orangutan, sense_intronic sense_intronic A549@0.0180065,AG04450@0.01612,BJ@0.0169855,GM12878@0.251924,H1HESC@0.001346,HELAS3@0.017253,HEPG2@0.0036155,HMEC@0,HSMM@0.0038095,HUVEC@0,K562@0,MCF7@0.007184,NHEK@0,NHLF@0,SKNSHRA@0.0772265, 0 0 0 0 ENSG00000225979.1 ENST00000442984.1 chr2:198176117-198177464 2 450 895 intergenic -5.25 0 0,0,1 0 0,0,0 0 57.8223463687151 143.336 0 0 234.127 0 0 204.343 0 0 chimp,dog,horse,human,macaque,marmoset,orangutan,panda,pig, antisense antisense A549@0,AG04450@0.0049585,BJ@0.0071595,GM12878@0.0855125,H1HESC@0,HELAS3@0.0554085,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0.004549,NHEK@0,NHLF@0,SKNSHRA@0.010048, 0 0 0 0 ENSG00000237035.1 ENST00000448977.1 chr2:199052526-199056245 2 516 3201 intergenic -1.77 0 0,0,0 0 0,0,0 13.3662790697674 0 0 9.11627906976744 0.895970009372071 3.315 14.4360465116279 0.94095595126523 3.536 0 0 cat,chimp,cow,dog,elephant,horse,human,macaque,marmoset,orangutan,panda,pig, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000237035.1 ENST00000422899.1 chr2:199055688-199056241 2 307 244 intergenic 0 0 0,0,0 0 0,0,0 0 0 0 0 0 3.315 0 0 3.536 0 0 chimp,cow,dog,elephant,horse,human,macaque,marmoset,orangutan,panda,pig, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000236653.1 ENST00000456248.1 chr2:199164087-199239273 2 2526 72658 intergenic 1.91 0 0,0,0 0 0,0,0 9.47901821060966 81.482686008423 162.101 0.104117181314331 81.188939965317 105.091 0.772763262074426 82.7934845440282 97.621 0 0 chimp,human,macaque,marmoset,orangutan, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000236653.1 ENST00000451266.1 chr2:199166132-199179438 2 562 12742 intergenic -4.29 0 0,0,0 0 0,0,0 0 62.7629100612149 47.317 0 57.1240778527704 22.971 0 58.3882436038299 29.48 0 0 chimp,horse,human,macaque,marmoset,orangutan,panda,rabbit, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000236653.1 ENST00000443261.1 chr2:199239200-199239821 2 355 264 intergenic -0.02 0 0,0,0 0 0,0,0 387.340845070423 88.2121212121212 24.808 227.121126760563 64.7121212121212 7.296 210.078873239437 65.1401515151515 7.429 0 0 cat,chimp,cow,dog,elephant,guinea_pig,horse,human,macaque,marmoset,mouse,orangutan,panda,pig,rabbit,rat, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000225421.1 ENST00000440609.1 chr2:199417919-199637080 3 501 218656 intergenic -15.80 0 0,0,0 0 0,0,0 0 51.3608087589638 28.016 0 50.953227901361 0 0 50.9016720327821 1.295 0 0 chimp,cow,dog,horse,human,macaque,marmoset,orangutan,panda,pig,rabbit, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000231557.1 ENST00000456031.1 chr2:199747297-199936514 3 553 188660 intergenic -4.18 0 0,1,0 0 0,0,0 29.9457504520796 19.0054065514683 68.588 79.9204339963834 18.6095356726386 87.506 83.4575045207957 18.7948372734019 79.676 0 0 chimp,cow,dog,elephant,horse,human,macaque,marmoset,orangutan,panda,pig,rabbit, lincRNA lincRNA A549@0,AG04450@0,BJ@0.0058205,GM12878@0,H1HESC@0.075619,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0.0098045,MCF7@0.0220845,NHEK@0,NHLF@0.0069405,SKNSHRA@0, 0 0 0 0 ENSG00000257045.1 ENST00000489557.2 chr2:200190033-200194085 3 828 3220 exonic -5.05 0 0,0,0 0 0,0,0 210.664251207729 49.6984472049689 230.26 267.463768115942 29.8329192546584 234.772 295.886473429952 36.6484472049689 273.419 0 0 cat,chimp,cow,dog,elephant,horse,human,macaque,marmoset,opossum,orangutan,panda,pig, antisense antisense A549@0,AG04450@0,BJ@0.002912,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0.0090045,HUVEC@0,K562@0,MCF7@0.002474,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000225953.2 ENST00000442967.1 chr2:200322423-200324615 2 558 1632 exonic 0.45 0 0,1,1 1 0,0,0 186.620071684588 330.325367647059 146.565 294.055555555556 207.323529411765 192.633 259.756272401434 185.824754901961 171.45 0 0 chimp,cow,elephant,horse,human,macaque,mouse,orangutan,panda,pig,rabbit,rat, lincRNA retained_intron A549@0.0313925,AG04450@0.008208,BJ@0.001769,GM12878@0,H1HESC@0.0052525,HELAS3@0.0158965,HEPG2@0,HMEC@0,HSMM@0.0040705,HUVEC@0.0008355,K562@0.122333,MCF7@0.0796065,NHEK@0.00227967,NHLF@0.0074,SKNSHRA@0, 0 0 0 0 ENSG00000225953.2 ENST00000441234.1 chr2:200322560-200341227 4 464 18197 exonic 0 0 0,1,0 0 0,0,0 156.431034482759 69.9140517667747 148.253 226.206896551724 70.9759300983679 224.176 222.198275862069 67.4722206957191 182.841 0 0 cat,chimp,dog,elephant,horse,human,macaque,marmoset,panda,pig, lincRNA processed_transcript A549@0.0313925,AG04450@0.008208,BJ@0.001769,GM12878@0,H1HESC@0.0052525,HELAS3@0.0158965,HEPG2@0,HMEC@0,HSMM@0.0040705,HUVEC@0.0008355,K562@0.122333,MCF7@0.0796065,NHEK@0.00227967,NHLF@0.0074,SKNSHRA@0, 0 0 0 0 ENSG00000225953.2 ENST00000450728.1 chr2:200332821-200337479 2 3312 1344 exonic 9.98 0 0,0,0 0 0,0,0 4.64975845410628 68.2202380952381 0 12.256038647343 90.0520833333333 2.151 12.604770531401 83.9866071428572 0.94 0 0 cat,chimp,cow,human,macaque,marmoset,orangutan,panda, lincRNA processed_transcript A549@0.0313925,AG04450@0.008208,BJ@0.001769,GM12878@0,H1HESC@0.0052525,HELAS3@0.0158965,HEPG2@0,HMEC@0,HSMM@0.0040705,HUVEC@0.0008355,K562@0.122333,MCF7@0.0796065,NHEK@0.00227967,NHLF@0.0074,SKNSHRA@0, 0 0 0 0 ENSG00000225953.2 ENST00000446911.1 chr2:200333609-200334876 2 579 686 intronic -4.10 0 0,0,0 0 0,0,0 24.0518134715026 26.002915451895 59.08 36.3056994818653 53.1836734693878 62.251 39.8704663212435 40.6180758017493 62.334 0 0 cat,chimp,cow,dog,elephant,human,macaque,marmoset,orangutan,panda,pig,rabbit, lincRNA processed_transcript A549@0.0313925,AG04450@0.008208,BJ@0.001769,GM12878@0,H1HESC@0.0052525,HELAS3@0.0158965,HEPG2@0,HMEC@0,HSMM@0.0040705,HUVEC@0.0008355,K562@0.122333,MCF7@0.0796065,NHEK@0.00227967,NHLF@0.0074,SKNSHRA@0, 0 0 0 0 ENSG00000225953.2 ENST00000416200.1 chr2:200334619-200341658 2 3195 3842 exonic 2.60 0 0,0,1 0 0,0,0 4.82003129890454 31.0572618427902 28.388 12.7048513302034 39.7706923477356 52.409 12.5339593114241 43.3519000520562 45.765 0 0 chimp,human,macaque,orangutan, lincRNA processed_transcript A549@0.0313925,AG04450@0.008208,BJ@0.001769,GM12878@0,H1HESC@0.0052525,HELAS3@0.0158965,HEPG2@0,HMEC@0,HSMM@0.0040705,HUVEC@0.0008355,K562@0.122333,MCF7@0.0796065,NHEK@0.00227967,NHLF@0.0074,SKNSHRA@0, 0 0 0 0 ENSG00000238217.1 ENST00000427045.1 chr2:200472791-200495210 4 556 21857 intergenic 1.27 0 0,0,0 0 0,0,0 0 31.3526101477787 0 0 29.5341538179988 0 0 31.8111360204969 0 0 0 chimp,human,macaque,marmoset,orangutan, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0.000899,NHEK@0.00111633,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000238217.1 ENST00000419243.1 chr2:200472791-200495438 5 848 21791 intergenic 1.27 0 0,0,0 0 0,0,0 0 31.4475700977468 0 0 29.6236060759029 0 0 31.907484741407 0 0 0 chimp,human,macaque,marmoset,orangutan,pig,rabbit, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0.000899,NHEK@0.00111633,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000238217.1 ENST00000439734.1 chr2:200489254-200523855 6 2281 32310 intergenic 1.29 0 0,0,1 0 0,0,0 124.393248575186 15.2540080470443 269.758 165.623849188952 16.1817393995667 249.843 150.151687856203 16.5748994119468 266.597 0 0 chimp,dog,horse,human,macaque,marmoset,orangutan,panda,pig,rabbit, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0.000899,NHEK@0.00111633,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000238217.1 ENST00000453035.1 chr2:200496454-200523784 4 529 26795 intergenic -1.62 0 0,0,1 0 0,0,0 0 16.9262175779063 283.741 0 18.4543011755925 377.788 0 18.626982646016 342.496 0 0 chimp,human,macaque,marmoset,orangutan,panda,pig, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0.000899,NHEK@0.00111633,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000226124.2 ENST00000416668.1 chr2:200625267-200715896 4 940 89683 intergenic -3.22 0 1,1,1 1 0,0,0 51.836170212766 52.2128162528015 384.476 31.7148936170213 50.6236744979539 349.318 65.413829787234 51.2984177603336 309.492 0 0 chimp,dog,elephant,horse,human,macaque,marmoset,orangutan,pig, processed_transcript processed_transcript A549@0.557988,AG04450@0.0098235,BJ@0.020395,GM12878@0.0197005,H1HESC@0.129834,HELAS3@0.204852,HEPG2@0.111798,HMEC@0.034855,HSMM@0.0844735,HUVEC@0.041793,K562@0.113316,MCF7@0.239046,NHEK@0.175757,NHLF@0.071626,SKNSHRA@0, 0 0 0 0 ENSG00000226124.2 ENST00000420922.2 chr2:200625273-200715596 5 767 89548 intergenic 0.69 0 1,1,1 0 0,0,0 63.4453125 52.2921147553798 176.276 55.0169270833333 50.557684791227 111.118 111.73046875 51.1002155292751 98.736 0 0 cat,chimp,cow,dog,horse,human,macaque,marmoset,mouse,opossum,orangutan,panda,pig,rabbit, processed_transcript processed_transcript A549@0.557988,AG04450@0.0098235,BJ@0.020395,GM12878@0.0197005,H1HESC@0.129834,HELAS3@0.204852,HEPG2@0.111798,HMEC@0.034855,HSMM@0.0844735,HUVEC@0.041793,K562@0.113316,MCF7@0.239046,NHEK@0.175757,NHLF@0.071626,SKNSHRA@0, 0 0 0 0 ENSG00000226124.2 ENST00000420128.1 chr2:200677235-200715866 5 1016 37607 intergenic -3.65 0 1,1,1 1 0,0,0 183.797244094488 65.9220889727976 363.656 170.117125984252 62.2370835216848 325.498 189.695866141732 64.4647273114048 288.162 0 0 chimp,elephant,human,macaque,marmoset,orangutan,pig,rabbit, processed_transcript processed_transcript A549@0.557988,AG04450@0.0098235,BJ@0.020395,GM12878@0.0197005,H1HESC@0.129834,HELAS3@0.204852,HEPG2@0.111798,HMEC@0.034855,HSMM@0.0844735,HUVEC@0.041793,K562@0.113316,MCF7@0.239046,NHEK@0.175757,NHLF@0.071626,SKNSHRA@0, 0 0 0 0 ENSG00000232732.3 ENST00000457577.3 chr2:200732303-200775805 3 737 42761 intergenic 0 0 0,1,0 1 0,0,0 132.244233378562 17.6522766071888 53.928 32.493894165536 22.7177100629078 67.693 47.5590230664858 23.5423867542854 77.867 0 0 chimp,cow,dog,elephant,horse,human,macaque,marmoset,mouse,opossum,orangutan,pig,rabbit,rat, processed_transcript processed_transcript A549@0.0325455,AG04450@0.0042765,BJ@0.003265,GM12878@0.0754555,H1HESC@0.007949,HELAS3@0.0042385,HEPG2@0.0375085,HMEC@0,HSMM@0.09428,HUVEC@0.012812,K562@0.0093285,MCF7@0.030638,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000232732.3 ENST00000417006.1 chr2:200747182-200775678 5 749 27739 intergenic -0.50 0 0,0,0 0 0,0,0 0 6.20689282238004 53.928 0 7.72320559501063 67.693 0 9.02667724142904 77.867 0 0 chimp,horse,human,macaque,marmoset,orangutan, processed_transcript processed_transcript A549@0.0325455,AG04450@0.0042765,BJ@0.003265,GM12878@0.0754555,H1HESC@0.007949,HELAS3@0.0042385,HEPG2@0.0375085,HMEC@0,HSMM@0.09428,HUVEC@0.012812,K562@0.0093285,MCF7@0.030638,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000232732.3 ENST00000413557.1 chr2:200758983-200773881 2 458 14438 intergenic 1.06 0 0,0,0 0 0,0,0 0 10.9954979914116 0 0 13.8125779193794 1.912 0 15.4122454633606 5.896 0 0 cat,chimp,dog,elephant,horse,human,macaque,marmoset,orangutan,panda,rabbit, processed_transcript processed_transcript A549@0.0325455,AG04450@0.0042765,BJ@0.003265,GM12878@0.0754555,H1HESC@0.007949,HELAS3@0.0042385,HEPG2@0.0375085,HMEC@0,HSMM@0.09428,HUVEC@0.012812,K562@0.0093285,MCF7@0.030638,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000232732.3 ENST00000454153.1 chr2:200759067-200773881 3 474 14336 intergenic 1.06 0 0,0,0 0 0,0,0 0 11.07373046875 0 0 13.9108537946429 1.912 0 15.5219029017857 5.896 0 0 chimp,dog,elephant,horse,human,macaque,marmoset,orangutan,panda,rabbit, processed_transcript processed_transcript A549@0.0325455,AG04450@0.0042765,BJ@0.003265,GM12878@0.0754555,H1HESC@0.007949,HELAS3@0.0042385,HEPG2@0.0375085,HMEC@0,HSMM@0.09428,HUVEC@0.012812,K562@0.0093285,MCF7@0.030638,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000237166.1 ENST00000452787.1 chr2:201577028-201599900 3 2047 20821 intergenic 1.71 1 0,1,1 0 0,0,0 0 0.895346044858556 0 6.14509037616024 2.1050381826041 3.828 6.40840254030288 7.68968829547092 3.852 0 0 chimp,elephant,human,macaque,marmoset,orangutan, lincRNA processed_transcript A549@0.031158,AG04450@0.0086645,BJ@0.0094715,GM12878@0.0174445,H1HESC@0.0028395,HELAS3@0.0546335,HEPG2@0.025678,HMEC@0.101866,HSMM@0.002224,HUVEC@0,K562@0.015267,MCF7@0.0078905,NHEK@0.144719,NHLF@0.003786,SKNSHRA@0.0022135, 0 0 0 0 ENSG00000230408.2 ENST00000447972.2 chr2:201645218-201676565 4 545 30796 exonic 6.26 1 0,1,0 0 0,0,0 0 3.39037537342512 53.196 38.154128440367 7.90047408754384 134.474 60.2917431192661 10.3581958695935 154.651 0 0 chimp,cow,elephant,human,macaque,marmoset,orangutan,rat, antisense antisense A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0.0590995,HEPG2@0.0298115,HMEC@0,HSMM@0,HUVEC@0.0132865,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000183308.6 ENST00000413848.1 chr2:201827986-201873825 2 483 45354 exonic 1.18 0 0,1,0 0 0,0,0 94.3850931677019 60.17056929929 0 137.55900621118 71.9059619879173 0 146.521739130435 75.9082550601932 0 0 0 chimp,cow,elephant,human,macaque,marmoset,opossum,orangutan,panda,pig,platypus,rabbit, antisense antisense A549@0.179574,AG04450@0.0541705,BJ@0.161695,GM12878@0.100896,H1HESC@0.030224,HELAS3@0.168903,HEPG2@0.175617,HMEC@0.059953,HSMM@0.136306,HUVEC@0.126857,K562@0.0854475,MCF7@0.170381,NHEK@0.002632,NHLF@0.030835,SKNSHRA@0.103495, 0 0 0 0 ENSG00000183308.6 ENST00000332935.6 chr2:201828022-201843705 2 818 14863 exonic -3.27 0 1,1,1 0 0,0,0 22.7750611246944 33.2769292874924 0 8.93031784841076 48.2657606136043 0 5.94621026894866 44.7083361367153 0 0 0 chimp,human,macaque,marmoset,orangutan, antisense antisense A549@0.179574,AG04450@0.0541705,BJ@0.161695,GM12878@0.100896,H1HESC@0.030224,HELAS3@0.168903,HEPG2@0.175617,HMEC@0.059953,HSMM@0.136306,HUVEC@0.126857,K562@0.0854475,MCF7@0.170381,NHEK@0.002632,NHLF@0.030835,SKNSHRA@0.103495, 0 0 0 0 ENSG00000232719.1 ENST00000448256.1 chr2:201966105-201967859 2 1267 485 intergenic -6.78 0 0,0,0 0 0,0,0 46.7868981846882 0 0 31.2983425414365 0 28.327 241.083662194159 100.876288659794 29.971 0 0 chimp,human,macaque,marmoset,orangutan, lincRNA lincRNA A549@0.0053155,AG04450@0.0087935,BJ@0,GM12878@0.00837,H1HESC@0,HELAS3@0,HEPG2@0.009167,HMEC@0,HSMM@0,HUVEC@0,K562@0.0075305,MCF7@0.0266095,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000226312.2 ENST00000474886.2 chr2:202005007-202008919 2 221 3689 exonic 0 0 0,0,0 0 0,0,0 4.57466063348416 0 49.539 79.868778280543 2.0734616427216 31.09 82.0678733031674 4.32258064516129 35.362 0 0 cat,chimp,dog,elephant,guinea_pig,horse,human,macaque,marmoset,orangutan,panda,pig,rabbit, antisense antisense A549@0.058379,AG04450@0.0090495,BJ@0.025813,GM12878@0,H1HESC@0,HELAS3@0.0112315,HEPG2@0.0144135,HMEC@0.0118,HSMM@0.044124,HUVEC@0,K562@0,MCF7@0,NHEK@0.0793647,NHLF@0.0074555,SKNSHRA@0.0314355, 0 0 0 0 ENSG00000226312.2 ENST00000415011.1 chr2:202005012-202022515 7 1034 16457 exonic -4.39 0 0,0,0 0 0,0,0 0.339458413926499 7.27799720483685 0 17.0705996131528 8.43774685544145 5.491 20.5464216634429 9.2881448623686 5.525 0 0 cat,chimp,elephant,human,macaque,orangutan,pig, antisense antisense A549@0.058379,AG04450@0.0090495,BJ@0.025813,GM12878@0,H1HESC@0,HELAS3@0.0112315,HEPG2@0.0144135,HMEC@0.0118,HSMM@0.044124,HUVEC@0,K562@0,MCF7@0,NHEK@0.0793647,NHLF@0.0074555,SKNSHRA@0.0314355, 0 0 0 0 ENSG00000234431.2 ENST00000434645.1 chr2:202031688-202032269 2 443 136 intergenic -4.20 0 1,1,1 0 0,0,1 0 0 0 0 0 0 0 0 0 0 0 chimp,human,macaque,marmoset,orangutan, lincRNA lincRNA A549@1.53801,AG04450@1.25026,BJ@1.43719,GM12878@7.3238,H1HESC@0.548909,HELAS3@0.71821,HEPG2@2.65081,HMEC@2.37396,HSMM@4.40287,HUVEC@9.05045,K562@3.82502,MCF7@1.2866,NHEK@4.50615,NHLF@1.98776,SKNSHRA@1.25525, 0 0 0 0 ENSG00000222035.1 ENST00000409819.1 chr2:202978349-202981781 2 3091 339 intronic -0.14 0 0,0,1 0 0,0,0 108.486573924296 0 0 93.9718537690068 6.7787610619469 12.977 92.9527660951149 6.90265486725664 13.689 0 0 human,macaque,marmoset, antisense antisense A549@0.0166165,AG04450@0.033809,BJ@0.0703885,GM12878@0,H1HESC@0.01526,HELAS3@0.00625,HEPG2@0,HMEC@0,HSMM@0.0084135,HUVEC@0,K562@0,MCF7@0.069307,NHEK@0.004847,NHLF@0.136749,SKNSHRA@0.0168115, 0 0 0 0 ENSG00000231903.1 ENST00000447111.1 chr2:203043383-203044114 2 309 420 intronic 0 1 0,0,1 0 0,0,0 0 0 180.84 0 10.8119047619048 128.965 136.278317152104 11.3547619047619 442.188 0 0 chimp,dog,horse,human,macaque,marmoset,orangutan,rabbit,rat, antisense antisense A549@0.320014,AG04450@0.0973465,BJ@0.0233435,GM12878@0.081379,H1HESC@0,HELAS3@0.0491385,HEPG2@0,HMEC@0,HSMM@0.0938595,HUVEC@0,K562@0.057881,MCF7@0.0649395,NHEK@0.159167,NHLF@0.043778,SKNSHRA@0.0470635, 0 0 0 0 ENSG00000256458.1 ENST00000469747.2 chr2:204193182-204193949 2 425 340 exonic 4.22 0 0,0,1 0 0,0,0 18.3764705882353 170.191176470588 0 65.8423529411765 268.141176470588 16.76 45.9435294117647 306.188235294118 26.615 0 0 cat,chimp,cow,dog,elephant,horse,human,macaque,marmoset,mouse,orangutan,panda, antisense antisense A549@0,AG04450@0,BJ@0.0056675,GM12878@0.0054895,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0.0053385,HUVEC@0.013939,K562@0,MCF7@0,NHEK@0,NHLF@0.0090375,SKNSHRA@0.015959, 0 0 0 0 ENSG00000234714.1 ENST00000411436.1 chr2:204955180-204974572 5 565 18819 intergenic -5.72 0 0,0,0 0 0,0,0 145.469026548673 33.7037037037037 353.976 112.038938053097 42.0534034752112 344.275 135.638938053097 41.7513151602104 332.446 0 0 cat,chimp,dog,elephant,guinea_pig,horse,human,macaque,marmoset,mouse,opossum,orangutan,panda,pig,rabbit,rat, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000237271.1 ENST00000419860.1 chr2:205092860-205099708 2 539 6307 intergenic 3.44 0 0,0,0 0 0,0,0 164.142857142857 70.3180592991914 0 167.374768089054 93.0220390042809 5.202 120.358070500928 96.3301094022515 6.49 0 0 chimp,cow,dog,elephant,horse,human,macaque,marmoset,mouse,orangutan,panda,pig,rat, lincRNA lincRNA A549@0.0454285,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0.0763095, 0 0 0 0 ENSG00000236634.1 ENST00000444017.1 chr2:205334799-205338560 2 586 3173 intergenic -5.53 0 0,0,0 0 0,0,0 43.4266211604096 61.5203277655216 0 96.1194539249147 73.7973526630949 0 89.5477815699659 86.8720453829184 0 0 0 cat,chimp,cow,dog,horse,human,macaque,marmoset,opossum,orangutan,panda,rabbit,rat, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000237843.1 ENST00000456384.1 chr2:205340079-205372395 2 324 31990 intergenic 0 0 0,0,0 0 0,0,0 57.037037037037 33.9556423882463 0 206.339506172839 45.0311659893717 5.691 185.287037037037 44.7564551422319 6.219 0 0 chimp,cow,dog,elephant,guinea_pig,horse,human,macaque,marmoset,mouse,opossum,orangutan,rabbit,rat, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000225216.1 ENST00000423425.1 chr2:206624221-206628730 3 550 3955 exonic 6.68 0 0,0,0 0 0,0,0 102.674545454545 15.7332490518331 61.415 163.26 77.6209860935525 246.086 173.721818181818 76.9092288242731 239.246 0 0 cat,chimp,dog,elephant,human,macaque,marmoset,orangutan,panda, antisense antisense A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0.0428805,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0.00632,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000225610.1 ENST00000422116.1 chr2:206854309-206865582 3 778 10491 exonic -2.11 0 0,0,0 0 0,0,0 23.9460154241645 164.083214183586 0 25.4935732647815 198.01925459918 0 27.6015424164524 203.446096654275 0 0 0 cat,chimp,cow,dog,horse,human,macaque,marmoset,orangutan,panda, antisense antisense A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0.021378,HEPG2@0.071115,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0.00337333,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000227946.1 ENST00000420509.1 chr2:206949329-206951288 2 750 1207 exonic 1.09 0 0,1,0 1 0,0,0 559.904 315.385252692626 74.664 409.189333333333 277.318972659486 12.833 383.885333333333 268.015741507871 13.473 0 0 cat,chimp,cow,dog,elephant,human,macaque,marmoset,mouse,orangutan,panda,pig,rabbit,rat, lincRNA lincRNA A549@0.221297,AG04450@0.151115,BJ@0.200064,GM12878@0.434467,H1HESC@0.729119,HELAS3@0.3951,HEPG2@1.50122,HMEC@0.158207,HSMM@0.226703,HUVEC@0.298833,K562@0.402493,MCF7@0.296837,NHEK@0.174784,NHLF@0.150142,SKNSHRA@0.576937, 0 0 0 0 ENSG00000227946.1 ENST00000435627.1 chr2:206950246-206950880 2 480 152 exonic 0 0 0,1,1 0 0,0,0 463.05 648 281.238 456.70625 775 170.5 483.633333333333 770 148.461 0 0 cat,chimp,cow,elephant,guinea_pig,human,macaque,mouse,opossum,orangutan,pig,rat, lincRNA lincRNA A549@0.221297,AG04450@0.151115,BJ@0.200064,GM12878@0.434467,H1HESC@0.729119,HELAS3@0.3951,HEPG2@1.50122,HMEC@0.158207,HSMM@0.226703,HUVEC@0.298833,K562@0.402493,MCF7@0.296837,NHEK@0.174784,NHLF@0.150142,SKNSHRA@0.576937, 0 0 0 0 ENSG00000231955.1 ENST00000453039.1 chr2:206980271-206987047 2 1409 5365 exonic 1.17 0 0,1,0 0 0,0,0 0 0 0 23.3321504613201 0 6.375 198.488999290277 0 6.475 0 0 cat,chimp,cow,human,macaque,marmoset,orangutan,rabbit, antisense antisense A549@0.0113915,AG04450@0.0130305,BJ@0.0034895,GM12878@0.0180295,H1HESC@0,HELAS3@0.027688,HEPG2@0.0166115,HMEC@0,HSMM@0.003231,HUVEC@0,K562@0.0076585,MCF7@0.0043715,NHEK@0,NHLF@0,SKNSHRA@0.006443, 0 0 0 0 ENSG00000228577.1 ENST00000415275.1 chr2:207471221-207474536 3 437 2874 intronic 2.97 0 0,0,0 0 0,0,0 0 9.26513569937369 148.5 0 14.473556019485 145.407 0 15.0974251913709 165.051 0 0 cat,chimp,cow,dog,elephant,horse,human,macaque,marmoset,orangutan,panda,rabbit, antisense antisense A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000231653.1 ENST00000415029.1 chr2:207504797-207506006 2 564 643 intergenic 0.34 0 0,0,0 0 0,0,0 0 0 0 0 0 0 0 0 0 0 0 chimp,dog,human,macaque,orangutan, antisense antisense A549@0,AG04450@0,BJ@0,GM12878@0.0420455,H1HESC@0.005142,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0.0189833,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000235118.3 ENST00000543490.1 chr2:207507142-207514173 3 1373 5654 intergenic 1.41 0 0,0,0 0 0,0,1 160.140568099053 1.94552529182879 59.85 183.911871813547 8.72338167668907 42.232 168.773488710852 10.240183940573 34.643 0 0 chimp,cow,dog,elephant,guinea_pig,horse,human,macaque,marmoset,orangutan,panda,pig,platypus,rabbit, antisense antisense A549@0,AG04450@0,BJ@0,GM12878@0.002608,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0.001418,SKNSHRA@0.001649, 0 0 0 0 ENSG00000235118.3 ENST00000453816.1 chr2:207508145-207513571 2 212 5212 intergenic 0.48 0 0,0,0 0 0,0,1 0 37.9424405218726 32.319 86.8820754716981 51.1882194934766 300.784 142.391509433962 46.0813507290867 264.38 0 0 chimp,cow,dog,elephant,guinea_pig,horse,human,macaque,marmoset,mouse,opossum,orangutan,panda,pig,rabbit,rat, antisense antisense A549@0,AG04450@0,BJ@0,GM12878@0.002608,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0.001418,SKNSHRA@0.001649, 0 0 0 0 ENSG00000235118.3 ENST00000441223.1 chr2:207508951-207513735 2 771 4011 intergenic 1.41 0 0,1,0 0 0,0,1 242.225680933852 2.74245823984044 0 312.20233463035 10.2672650211917 2.976 281.662775616083 13.09349289454 0 0 0 chimp,dog,elephant,guinea_pig,horse,human,macaque,marmoset,mouse,opossum,orangutan,panda,pig,rabbit,rat, antisense antisense A549@0,AG04450@0,BJ@0,GM12878@0.002608,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0.001418,SKNSHRA@0.001649, 0 0 0 0 ENSG00000229321.1 ENST00000438070.1 chr2:207731519-207733013 2 644 848 intergenic -0.91 0 0,0,0 0 0,0,0 40.082298136646 9.49292452830189 40.672 79.1630434782609 27.2617924528302 61.651 77.3835403726708 29.6014150943396 61.417 0 0 cat,chimp,cow,dog,horse,human,macaque,marmoset,orangutan,panda, lincRNA lincRNA A549@0.080761,AG04450@0.0522885,BJ@0.0559565,GM12878@0.05276,H1HESC@0.219479,HELAS3@0.0193845,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0.01259,NHEK@0.074652,NHLF@0,SKNSHRA@0.024585, 0 0 0 0 ENSG00000237892.1 ENST00000428777.1 chr2:207985608-207986768 2 653 505 intronic -0.63 0 0,1,0 0 0,0,0 67.635528330781 0 0 80.0076569678407 6.2950495049505 7.19 80.0076569678407 6.42574257425743 4.976 0 0 cat,chimp,cow,dog,elephant,horse,human,macaque,marmoset,mouse,orangutan,panda,pig,rabbit, sense_intronic sense_intronic A549@1.28869,AG04450@1.15567,BJ@1.15063,GM12878@0.240145,H1HESC@0.297305,HELAS3@0.114992,HEPG2@0.0628815,HMEC@0.031833,HSMM@0.175228,HUVEC@1.84438,K562@0.0246985,MCF7@0.441962,NHEK@1.64387,NHLF@0.0455135,SKNSHRA@0.874053, 0 0 0 0 ENSG00000224342.1 ENST00000435643.1 chr2:208038358-208087514 5 549 48599 intergenic -1.75 0 0,0,0 0 0,0,0 0 23.5243729294841 0 65.7559198542805 47.9356571122863 2.629 54.9052823315118 51.5309162739974 4.948 0 0 chimp,cow,dog,elephant,guinea_pig,horse,human,macaque,marmoset,mouse,orangutan,panda,pig,rabbit,rat, lincRNA lincRNA A549@0.003918,AG04450@0.0100715,BJ@0.004368,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0.00492,MCF7@0,NHEK@0.004766,NHLF@0,SKNSHRA@0.0089575, 0 0 0 0 ENSG00000234902.2 ENST00000417096.1 chr2:208051441-208100607 3 553 48609 intergenic -0.53 0 0,0,1 0 0,0,0 0 34.9349297455204 0 0 59.8246415272892 0 0 62.2884445267337 0 0 0 human,macaque,orangutan, lincRNA lincRNA A549@0.125833,AG04450@0.087486,BJ@0.249953,GM12878@0.14634,H1HESC@0.030959,HELAS3@0.0047735,HEPG2@0.021401,HMEC@0.191475,HSMM@0.12657,HUVEC@0.0330025,K562@0.145614,MCF7@0.0366515,NHEK@0.0923527,NHLF@0.345846,SKNSHRA@0.853658, 0 0 0 0 ENSG00000234902.2 ENST00000448786.1 chr2:208084575-208100790 4 819 15390 intergenic -1.58 0 0,0,0 0 0,0,0 10.5054945054945 63.0380116959064 0 0 81.3447693307342 0 0 79.6085120207927 0 0 0 chimp,horse,human,macaque,marmoset,orangutan, lincRNA lincRNA A549@0.125833,AG04450@0.087486,BJ@0.249953,GM12878@0.14634,H1HESC@0.030959,HELAS3@0.0047735,HEPG2@0.021401,HMEC@0.191475,HSMM@0.12657,HUVEC@0.0330025,K562@0.145614,MCF7@0.0366515,NHEK@0.0923527,NHLF@0.345846,SKNSHRA@0.853658, 0 0 0 0 ENSG00000225916.1 ENST00000454444.1 chr2:208091673-208093032 2 549 808 intergenic 0.81 0 0,0,1 0 0,0,0 0 307.466584158416 0 0 277.042079207921 0 0 257.964108910891 0 0 0 cat,chimp,elephant,human,macaque,marmoset,orangutan,panda,pig, lincRNA lincRNA A549@0.017905,AG04450@0.0753185,BJ@0.098577,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0.02442,HUVEC@0.022064,K562@0,MCF7@0.0037315,NHEK@0.0475607,NHLF@0.0105445,SKNSHRA@0.096643, 0 0 0 0 ENSG00000240440.1 ENST00000440545.1 chr2:208100023-208102599 2 359 2215 intergenic -6.97 0 0,0,0 0 0,0,0 0 0 0 0 0 1.736 0 0 1.813 0 0 chimp,human,macaque,marmoset,orangutan, lincRNA lincRNA A549@0.0468495,AG04450@0.0082005,BJ@0.0916655,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0.079926,HMEC@0,HSMM@0,HUVEC@0,K562@0.02624,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0.213967, 0 0 0 0 ENSG00000229647.1 ENST00000440326.1 chr2:208104374-208110312 2 804 5132 intergenic 2.46 0 1,1,1 0 0,0,0 0 9.23889321901793 13.64 9.37313432835821 30.1270459859704 13.685 12.5174129353234 31.4694076383476 17.267 0 0 cat,chimp,dog,human,macaque,marmoset,orangutan, lincRNA lincRNA A549@0.0276485,AG04450@0.610247,BJ@0.967565,GM12878@0.0072565,H1HESC@0,HELAS3@0.007909,HEPG2@0,HMEC@25.328,HSMM@4.23104,HUVEC@0.0058095,K562@0.04096,MCF7@0.0096045,NHEK@14.7724,NHLF@0.469114,SKNSHRA@0.437922, 0 0 0 0 ENSG00000229647.1 ENST00000430494.1 chr2:208104535-208110611 3 971 5101 intergenic 2.46 0 1,1,1 0 0,0,0 0 9.29504018819839 13.64 5.39340885684861 29.283473828661 21.221 7.63233779608651 30.6139972554401 25.259 0 0 chimp,dog,human,macaque,marmoset,orangutan,panda, lincRNA lincRNA A549@0.0276485,AG04450@0.610247,BJ@0.967565,GM12878@0.0072565,H1HESC@0,HELAS3@0.007909,HEPG2@0,HMEC@25.328,HSMM@4.23104,HUVEC@0.0058095,K562@0.04096,MCF7@0.0096045,NHEK@14.7724,NHLF@0.469114,SKNSHRA@0.437922, 0 0 0 0 ENSG00000223725.1 ENST00000432413.1 chr2:208104588-208124809 3 578 19639 intergenic -1.46 0 0,1,1 0 0,0,0 0 32.5057793166658 0 12.7820069204152 42.7022251642141 8.591 13.1453287197232 42.7388869087021 18.093 0 0 chimp,cow,dog,elephant,guinea_pig,human,macaque,marmoset,orangutan,panda,rabbit,rat, antisense antisense A549@0.0590985,AG04450@0.0644945,BJ@0.0787645,GM12878@0.219609,H1HESC@0.074244,HELAS3@0.0306595,HEPG2@0.0692485,HMEC@0.073383,HSMM@0.0252485,HUVEC@0.0089105,K562@0.076056,MCF7@0.017595,NHEK@0.111623,NHLF@0.010303,SKNSHRA@0.406261, 0 0 0 0 ENSG00000223725.1 ENST00000412387.1 chr2:208104845-208394519 5 528 289138 exonic 3.34 0 0,1,0 0 0,0,0 0 24.6168853626988 422.52 13.9924242424242 35.8671845278033 544.014 17.0606060606061 37.0330949235313 510.615 0 0 chimp,cow,dog,guinea_pig,human,macaque,marmoset,orangutan,panda,rabbit,rat, antisense antisense A549@0.0590985,AG04450@0.0644945,BJ@0.0787645,GM12878@0.219609,H1HESC@0.074244,HELAS3@0.0306595,HEPG2@0.0692485,HMEC@0.073383,HSMM@0.0252485,HUVEC@0.0089105,K562@0.076056,MCF7@0.017595,NHEK@0.111623,NHLF@0.010303,SKNSHRA@0.406261, 0 0 0 0 ENSG00000225064.1 ENST00000438824.1 chr2:208125169-208135414 3 520 9721 intergenic -2.04 0 0,0,0 0 0,0,0 0 17.0258203888489 0 0 21.3973871000926 2.208 0 23.5163049069026 2.224 0 0 chimp,dog,human,macaque,marmoset,orangutan, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0.070462,HSMM@0.0323225,HUVEC@0,K562@0,MCF7@0,NHEK@0.012616,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000223725.1 ENST00000418850.1 chr2:208192614-208394515 6 735 201156 exonic 0.83 0 0,1,0 0 0,0,0 0 26.709951480443 421.08 0 39.1694555469387 542.712 9.67074829931973 39.3547346338165 509.199 0 0 chimp,human,macaque,marmoset,orangutan, antisense antisense A549@0.0590985,AG04450@0.0644945,BJ@0.0787645,GM12878@0.219609,H1HESC@0.074244,HELAS3@0.0306595,HEPG2@0.0692485,HMEC@0.073383,HSMM@0.0252485,HUVEC@0.0089105,K562@0.076056,MCF7@0.017595,NHEK@0.111623,NHLF@0.010303,SKNSHRA@0.406261, 0 0 0 0 ENSG00000224137.1 ENST00000429730.1 chr2:208527099-208531748 2 490 4157 intergenic 4.94 1 1,1,1 0 0,0,0 28.2857142857143 10.7981717584797 0 0 36.676449362521 2.367 14.3428571428571 76.6127014674044 2.72 0 0 chimp,cow,dog,elephant,horse,human,macaque,orangutan,panda, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@23.4703,H1HESC@0,HELAS3@0.0053945,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000244567.1 ENST00000343987.2 chr2:208686014-208687493 2 1260 217 intergenic -2.10 0 0,0,0 0 0,0,1 114.731746031746 34.7649769585253 0 54.0761904761905 0 10.63 66.1666666666667 0 17.665 0 0 chimp,horse,human,macaque,marmoset,orangutan, lincRNA lincRNA A549@1.89058,AG04450@1.88474,BJ@1.13316,GM12878@0.642747,H1HESC@0.595835,HELAS3@1.00079,HEPG2@1.5698,HMEC@0.648889,HSMM@1.16873,HUVEC@0.91939,K562@0.230195,MCF7@0.771554,NHEK@0.743811,NHLF@1.34028,SKNSHRA@1.92908, 0 0 0 0 ENSG00000225111.1 ENST00000421964.1 chr2:208733306-208734639 2 467 864 intronic 0.79 1 1,1,1 0 0,0,0 109.511777301927 6.62037037037037 136.522 66.0578158458244 16.2071759259259 195.38 37.271948608137 22.3414351851852 197.847 0 0 cat,chimp,cow,dog,elephant,guinea_pig,human,macaque,marmoset,orangutan,panda,pig,rabbit,rat, sense_intronic sense_intronic A549@0.326802,AG04450@0.011178,BJ@0.016733,GM12878@0.131852,H1HESC@0.02515,HELAS3@0,HEPG2@0.133796,HMEC@0.010536,HSMM@0.08262,HUVEC@0.0275565,K562@0.005029,MCF7@0.0053615,NHEK@0.0362403,NHLF@0.030214,SKNSHRA@0.07454, 0 0 0 0 ENSG00000231908.1 ENST00000440574.1 chr2:209119971-209120905 2 462 470 intronic 0 0 1,1,1 1 0,0,0 0 0 0 8.58225108225108 0 22.753 9.14502164502164 0 23.607 0 0 chimp,human,macaque,marmoset,orangutan, antisense antisense A549@0.309327,AG04450@0.107183,BJ@0.0158275,GM12878@0.121372,H1HESC@0.426708,HELAS3@0.067542,HEPG2@0.345443,HMEC@0.130102,HSMM@0.0287875,HUVEC@0.150329,K562@0.123458,MCF7@0.126442,NHEK@0.121048,NHLF@0.167318,SKNSHRA@0.140388, 0 0 0 0 ENSG00000231908.1 ENST00000448588.1 chr2:209120124-209120892 2 487 279 exonic -11.18 0 1,1,1 0 0,0,0 0 0 0 0 0 24.018 0 0 25.052 0 0 chimp,human,macaque,marmoset,orangutan, antisense antisense A549@0.309327,AG04450@0.107183,BJ@0.0158275,GM12878@0.121372,H1HESC@0.426708,HELAS3@0.067542,HEPG2@0.345443,HMEC@0.130102,HSMM@0.0287875,HUVEC@0.150329,K562@0.123458,MCF7@0.126442,NHEK@0.121048,NHLF@0.167318,SKNSHRA@0.140388, 0 0 0 0 ENSG00000231896.1 ENST00000424628.1 chr2:209334575-209405138 3 517 70042 intronic 0.62 0 0,0,0 0 0,0,0 0 1.65098084006739 0 0 3.69308414951029 0 0 14.4990005996402 3.159 0 0 chimp,human,macaque,marmoset,orangutan,pig, processed_transcript processed_transcript A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0.026675, 2 44 0 0 ENSG00000229127.1 ENST00000452057.1 chr2:210895457-210929080 4 2195 31422 exonic 1.46 0 0,0,1 0 0,0,0 18.1093394077449 8.34714531220164 34.715 27.028701594533 8.80259054165871 82.88 20.5840546697039 9.26650117751894 58.902 0 0 cat,chimp,cow,dog,elephant,human,macaque,marmoset,mouse,orangutan,pig, antisense antisense A549@0.433852,AG04450@0.297206,BJ@0.30845,GM12878@0.839845,H1HESC@0.275998,HELAS3@0.509097,HEPG2@0.646271,HMEC@0.07262,HSMM@0.0642055,HUVEC@0.374225,K562@1.23256,MCF7@0.255807,NHEK@0.397683,NHLF@0.090768,SKNSHRA@0.351924, 0 0 0 0 ENSG00000231294.1 ENST00000412065.1 chr2:211036242-211095107 3 503 58358 intronic 0 0 0,1,0 0 0,0,0 0 11.3838548271017 285.224 7.89662027833002 17.3362006922787 384.186 8.11133200795229 18.7708797422804 379.216 0 0 chimp,human,macaque,marmoset, antisense antisense A549@0.0061345,AG04450@0,BJ@0,GM12878@0.005248,H1HESC@0.043054,HELAS3@0.119155,HEPG2@0.0654885,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0.138686,NHEK@0,NHLF@0,SKNSHRA@0.170544, 0 0 0 0 ENSG00000234281.1 ENST00000433296.1 chr2:211189483-211325606 5 859 135256 intronic -2.38 0 0,1,0 0 0,0,0 0 8.33046962796475 47.867 2.51455180442375 12.4874312414976 30.515 0 14.8168731886201 27.573 0 0 chimp,dog,elephant,horse,human,macaque,marmoset,orangutan,pig,rabbit, antisense antisense A549@0,AG04450@0,BJ@0,GM12878@0.417772,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@2.59539,HUVEC@0,K562@0,MCF7@0.002816,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000234281.1 ENST00000420418.1 chr2:211189490-211333418 6 470 143448 intronic 0.67 0 0,1,0 0 0,0,0 0 8.7785817857342 47.867 4.59574468085106 12.8886356031454 30.515 0 15.3032876024762 27.573 0 0 chimp,dog,human,macaque,marmoset,orangutan, antisense antisense A549@0,AG04450@0,BJ@0,GM12878@0.417772,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@2.59539,HUVEC@0,K562@0,MCF7@0.002816,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000234281.1 ENST00000416344.1 chr2:211325199-211333970 3 711 8056 intronic -4.30 0 0,0,0 0 0,0,0 15.2039381153305 16.4503475670308 54.736 0 19.8422293942403 70.697 10.9282700421941 23.728277060576 74.32 0 0 chimp,dog,elephant,guinea_pig,horse,human,macaque,marmoset,orangutan,panda,pig,rabbit, antisense antisense A549@0,AG04450@0,BJ@0,GM12878@0.417772,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@2.59539,HUVEC@0,K562@0,MCF7@0.002816,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000225332.2 ENST00000415387.1 chr2:213446081-213886269 5 428 439752 intronic -2.16 0 0,0,0 0 0,0,0 0 23.2559465335007 98.614 0 27.7951117902818 129.476 0 28.6755898779312 126.898 0 0 chimp,elephant,horse,human,macaque,marmoset,orangutan,panda,pig, processed_transcript processed_transcript A549@0,AG04450@0,BJ@0,GM12878@0.0189185,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0.0311817,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000234308.1 ENST00000434559.1 chr2:213660055-213661444 2 767 620 intergenic -0.47 0 0,0,0 0 0,0,0 0 0 14.575 0 0 55.01 0 0 56.485 0 0 chimp,cow,elephant,human,macaque,marmoset,orangutan,panda, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000234308.1 ENST00000453965.1 chr2:213660064-213683986 5 398 23516 intergenic -0.75 1 0,0,0 0 0,0,0 0 32.2857628848444 14.575 0 45.3435958496343 55.01 0 43.5540483075353 56.485 0 0 chimp,human,macaque,marmoset,orangutan, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000223373.1 ENST00000437261.1 chr2:213775727-213784533 3 593 8209 intergenic -4.95 0 0,0,1 0 0,0,0 91.9392917369309 46.9950054817883 0 102.657672849916 61.9587038616153 0 114.558178752108 59.3933487635522 0 0 0 cat,chimp,dog,horse,human,macaque,marmoset,opossum,orangutan,panda, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000236193.1 ENST00000426870.1 chr2:214020530-214032436 2 715 11189 intergenic -3.25 0 0,0,0 0 0,0,0 232.878321678322 26.8001608722853 71.1 358.268531468531 26.6246313343462 63.74 353.746853146853 27.4025382071678 66.336 0 0 cat,chimp,cow,dog,elephant,guinea_pig,horse,human,macaque,marmoset,mouse,opossum,orangutan,panda,pig,rabbit,rat, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0.138061,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0.0028675,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000196096.3 ENST00000360083.3 chr2:214141276-214148929 3 1724 5925 intergenic -0.41 0 0,1,1 0 0,0,1 0 6.78481012658228 10.865 0 10.7979746835443 28.383 0 11.7508860759494 32.975 0 0 chimp,human,macaque,marmoset,orangutan, lincRNA processed_transcript A549@0.0096185,AG04450@0.0878495,BJ@0.040032,GM12878@0.076799,H1HESC@0.024738,HELAS3@0.022659,HEPG2@0.029517,HMEC@0,HSMM@0.0092395,HUVEC@0,K562@0.0028445,MCF7@0,NHEK@0.032172,NHLF@0.029187,SKNSHRA@0.119417, 0 0 0 0 ENSG00000236738.2 ENST00000451880.2 chr2:214431233-214492419 2 501 60683 intronic -7.78 0 0,0,0 0 0,0,0 23.76 4.64002043372223 24.08 81.314 8.00929404785446 15.557 107.402 10.1683475051084 20.435 0 0 cat,chimp,cow,dog,elephant,guinea_pig,horse,human,macaque,marmoset,mouse,opossum,orangutan,panda,pig,platypus,rabbit,rat, antisense antisense A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000197585.5 ENST00000412896.1 chr2:215114764-215548970 4 438 433762 intronic -0.45 0 0,0,1 0 0,0,0 0 18.8209847796718 0 0.659817351598174 27.0278770385603 0 6.4041095890411 28.4539885928228 0 0 0 chimp,cow,dog,macaque,orangutan, processed_transcript processed_transcript A549@0,AG04450@0.0157275,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0.0327675, 0 0 0 0 ENSG00000197585.5 ENST00000437883.1 chr2:215176326-215548970 5 538 372098 intronic 3.32 0 0,0,0 0 0,0,0 0 21.4309348612462 0 0.537174721189591 30.4964041730942 0 5.21375464684015 30.1447710011879 0 0 0 chimp,dog,human,macaque,marmoset,orangutan, processed_transcript processed_transcript A549@0,AG04450@0.0157275,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0.0327675, 0 0 0 0 ENSG00000224257.1 ENST00000416430.1 chr2:215374920-215401614 4 463 26225 intronic -1.74 0 0,0,0 0 0,0,0 142.563714902808 18.9637750238322 0 227.466522678186 29.1641563393708 2.55 229.479481641469 28.3249571020019 7.823 0 0 chimp,cow,guinea_pig,horse,human,macaque,marmoset,opossum,orangutan,rabbit,rat, sense_intronic sense_intronic A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000229267.1 ENST00000420134.1 chr2:215825116-215826786 2 450 1218 intronic 3.36 1 0,0,1 0 0,0,0 0 27.1330049261084 0 5.31111111111111 40.4326765188834 0 13.0244444444444 56.0706075533662 1.701 0 0 cat,chimp,cow,dog,horse,human,macaque,marmoset,mouse,orangutan,panda,pig,rabbit, lincRNA processed_transcript A549@0.071837,AG04450@0.040628,BJ@0.027048,GM12878@0.567014,H1HESC@0.084248,HELAS3@0.06398,HEPG2@0.0645195,HMEC@0.036236,HSMM@0,HUVEC@0,K562@0.0120605,MCF7@0.0360245,NHEK@0.119778,NHLF@0.0172195,SKNSHRA@0.114575, 0 0 0 0 ENSG00000227769.2 ENST00000437897.2 chr2:215887270-215903765 5 562 15925 intronic 2.55 0 0,0,0 0 0,0,0 0 25.7583955809428 0 0 31.7853869813571 9.524 0 35.4473039984935 11.548 0 0 chimp,dog,horse,human,macaque,marmoset,orangutan,pig,rabbit, antisense antisense A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000227769.2 ENST00000419251.1 chr2:215887284-215887842 2 389 167 intronic -7.87 0 0,0,0 0 0,0,0 0 0 0 0 0 9.524 0 0 11.548 0 0 chimp,cow,human,macaque,marmoset,orangutan,pig, antisense retained_intron A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000237571.1 ENST00000448086.1 chr2:216139715-216142670 3 401 2550 intergenic -9.20 1 1,1,1 0 0,0,0 0 82.756862745098 0 0 84.0105882352941 0 0 83.0039215686274 0 0 0 chimp,human,macaque, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0.0165935,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000230695.1 ENST00000412951.1 chr2:216300976-216301715 2 129 608 intergenic 0 0 0,1,0 1 0,0,0 130.232558139535 22.2039473684211 51.136 146.767441860465 67.8930921052632 99.691 177.023255813953 55.8503289473684 100.182 0 0 cat,chimp,cow,elephant,horse,human,macaque,mouse,orangutan,panda,rat, antisense antisense A549@0,AG04450@0,BJ@0,GM12878@0.015388,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0.03139,NHEK@0,NHLF@0,SKNSHRA@0.0173495, 0 0 0 0 ENSG00000225166.1 ENST00000447835.1 chr2:216318430-216328594 4 821 9337 intergenic 1.12 0 0,0,1 0 0,0,0 0 4.8479168897933 17.48 6.68696711327649 23.4366498875442 37.95 3.11327649208283 23.2079897183249 40.085 0 0 cat,chimp,cow,elephant,horse,human,macaque,marmoset,orangutan,panda, lincRNA lincRNA A549@0,AG04450@0.0054335,BJ@0.023466,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0.004963,HSMM@0.0135465,HUVEC@0.036073,K562@0,MCF7@0,NHEK@0.0827213,NHLF@0.018868,SKNSHRA@0, 0 0 0 0 ENSG00000228618.1 ENST00000414756.1 chr2:216341390-216344971 2 389 3190 intergenic 1.17 0 0,1,0 0 0,0,0 0 6.06206896551724 0 0 22.6830721003135 0 0 22.4194357366771 0 0 0 chimp,human,macaque,orangutan, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0.61241,HUVEC@0.0152225,K562@0,MCF7@0,NHEK@0.044255,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000234938.2 ENST00000431727.2 chr2:216395170-216410249 5 498 14573 intergenic -2.71 0 0,0,0 0 0,0,0 0 9.54292184176216 0 38.933734939759 12.2264461675702 1.912 46.4979919678715 13.4024565978179 1.944 0 0 chimp,guinea_pig,horse,human,macaque,marmoset,orangutan,panda, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000237525.2 ENST00000422353.1 chr2:216397856-216486648 3 211 88577 intergenic 0 0 0,1,1 0 0,0,0 0 12.1877123858338 0 0 17.7288799575511 0 0 19.6340133443219 0 0 0 chimp,human,macaque,marmoset,orangutan, lincRNA lincRNA A549@0.006354,AG04450@0.0300995,BJ@0,GM12878@0.0079125,H1HESC@0.00181,HELAS3@0.032867,HEPG2@0.063607,HMEC@0.017807,HSMM@0,HUVEC@0.004257,K562@0,MCF7@0,NHEK@0.0207967,NHLF@0,SKNSHRA@0.004474, 0 0 0 0 ENSG00000237525.2 ENST00000417485.2 chr2:216410921-216578618 8 1634 166049 intergenic 3.00 0 0,1,0 0 0,0,0 0 10.9290519988194 0 2.06987951807229 17.3838805466713 1.912 1.51204819277108 18.5399191678261 1.944 0 0 cat,chimp,cow,dog,elephant,guinea_pig,horse,human,macaque,marmoset,mouse,orangutan,panda,pig,rabbit,rat, lincRNA lincRNA A549@0.006354,AG04450@0.0300995,BJ@0,GM12878@0.0079125,H1HESC@0.00181,HELAS3@0.032867,HEPG2@0.063607,HMEC@0.017807,HSMM@0,HUVEC@0.004257,K562@0,MCF7@0,NHEK@0.0207967,NHLF@0,SKNSHRA@0.004474, 0 0 0 0 ENSG00000227981.2 ENST00000457625.2 chr2:216444130-216447358 2 226 3000 intergenic 0 0 0,0,0 0 0,0,0 55.4867256637168 29.614 0 31.5929203539823 48.9476666666667 0 69.1106194690265 55.0926666666667 0 0 0 chimp,cow,elephant,horse,human,macaque,marmoset,orangutan,panda,pig, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0.0437105,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000235770.1 ENST00000445174.1 chr2:216476286-216708259 10 3680 228275 intergenic 5.56 0 0,0,1 0 0,0,0 10.9 9.8688161209068 0 5.8 15.8881699704304 0 6.75788043478261 16.9681042602125 0 0 0 chimp,human,orangutan, processed_transcript processed_transcript A549@0.09276,AG04450@0.0972125,BJ@0.062152,GM12878@0.424601,H1HESC@0.0479455,HELAS3@0.092855,HEPG2@0.349766,HMEC@0.026817,HSMM@0.172204,HUVEC@21.4907,K562@0.002143,MCF7@0.499306,NHEK@0.045895,NHLF@0.215493,SKNSHRA@0.031494, 0 0 0 0 ENSG00000235770.1 ENST00000423530.1 chr2:216484358-216692126 9 2095 205657 intergenic -0.86 0 0,0,1 0 0,0,0 11.0405727923628 9.53052412512096 0 10.5307875894988 15.5158540676952 0 10.9241050119332 16.6715745148475 0 0 0 chimp,human,macaque,marmoset,mouse,orangutan,panda,pig, processed_transcript processed_transcript A549@0.09276,AG04450@0.0972125,BJ@0.062152,GM12878@0.424601,H1HESC@0.0479455,HELAS3@0.092855,HEPG2@0.349766,HMEC@0.026817,HSMM@0.172204,HUVEC@21.4907,K562@0.002143,MCF7@0.499306,NHEK@0.045895,NHLF@0.215493,SKNSHRA@0.031494, 0 0 0 0 ENSG00000235770.1 ENST00000419922.1 chr2:216484831-216486076 2 524 719 intergenic -2.33 0 0,0,1 0 0,0,0 0 0 32.144 0 0 68.832 0 0 86.4 0 0 chimp,human,macaque,marmoset,orangutan,pig, processed_transcript processed_transcript A549@0.09276,AG04450@0.0972125,BJ@0.062152,GM12878@0.424601,H1HESC@0.0479455,HELAS3@0.092855,HEPG2@0.349766,HMEC@0.026817,HSMM@0.172204,HUVEC@21.4907,K562@0.002143,MCF7@0.499306,NHEK@0.045895,NHLF@0.215493,SKNSHRA@0.031494, 0 0 0 0 ENSG00000235770.1 ENST00000413563.1 chr2:216488846-216692164 5 565 202745 intergenic 5.56 0 0,1,1 0 0,0,0 0 9.50886581666625 0 0 15.3930898419197 0 0 16.4786850477201 0 0 0 chimp,dog,horse,human,macaque,marmoset,orangutan, processed_transcript processed_transcript A549@0.09276,AG04450@0.0972125,BJ@0.062152,GM12878@0.424601,H1HESC@0.0479455,HELAS3@0.092855,HEPG2@0.349766,HMEC@0.026817,HSMM@0.172204,HUVEC@21.4907,K562@0.002143,MCF7@0.499306,NHEK@0.045895,NHLF@0.215493,SKNSHRA@0.031494, 0 0 0 0 ENSG00000235770.1 ENST00000451392.1 chr2:216506491-216696313 5 576 189238 intergenic 5.56 0 0,1,1 0 0,0,0 0 9.95800526321352 0 0 16.0470412919181 0 0 17.1294401758632 0 0 0 chimp,human,macaque,marmoset,orangutan, processed_transcript processed_transcript A549@0.09276,AG04450@0.0972125,BJ@0.062152,GM12878@0.424601,H1HESC@0.0479455,HELAS3@0.092855,HEPG2@0.349766,HMEC@0.026817,HSMM@0.172204,HUVEC@21.4907,K562@0.002143,MCF7@0.499306,NHEK@0.045895,NHLF@0.215493,SKNSHRA@0.031494, 0 0 0 0 ENSG00000237525.2 ENST00000428487.1 chr2:216542747-216554494 4 504 11237 intergenic 6.38 0 0,0,1 0 0,0,0 0 13.8782593218831 0 0 15.6267687105099 21.073 0 15.5886802527365 26.402 0 0 chimp,guinea_pig,horse,human,marmoset,orangutan,pig, lincRNA lincRNA A549@0.006354,AG04450@0.0300995,BJ@0,GM12878@0.0079125,H1HESC@0.00181,HELAS3@0.032867,HEPG2@0.063607,HMEC@0.017807,HSMM@0,HUVEC@0.004257,K562@0,MCF7@0,NHEK@0.0207967,NHLF@0,SKNSHRA@0.004474, 0 0 0 0 ENSG00000230838.1 ENST00000415479.1 chr2:216582766-216584147 2 646 733 intergenic 0.09 0 0,1,0 0 0,0,0 110.340557275542 64.1582537517053 117.572 78.6532507739938 165.713506139154 125.142 84.5123839009288 160.787175989086 128.779 0 0 chimp,cow,dog,elephant,guinea_pig,horse,human,macaque,marmoset,orangutan,panda,rabbit,rat, lincRNA lincRNA A549@0.008525,AG04450@0.139426,BJ@0.0220855,GM12878@0,H1HESC@0,HELAS3@0.012883,HEPG2@0.029801,HMEC@0,HSMM@0.326621,HUVEC@3.2561,K562@0.0041315,MCF7@0,NHEK@0.00788,NHLF@0.51269,SKNSHRA@0.007015, 0 0 0 0 ENSG00000235770.1 ENST00000417922.1 chr2:216608543-216708445 5 553 99341 intergenic 5.56 0 0,0,0 0 0,0,0 0 6.80081738657754 0 0 11.9530506034769 0 0 13.5466927049255 0 0 0 chimp,human,macaque,marmoset,orangutan, processed_transcript processed_transcript A549@0.09276,AG04450@0.0972125,BJ@0.062152,GM12878@0.424601,H1HESC@0.0479455,HELAS3@0.092855,HEPG2@0.349766,HMEC@0.026817,HSMM@0.172204,HUVEC@21.4907,K562@0.002143,MCF7@0.499306,NHEK@0.045895,NHLF@0.215493,SKNSHRA@0.031494, 0 0 0 0 ENSG00000227824.1 ENST00000443971.1 chr2:216734646-216735241 2 476 117 intergenic -5.98 0 0,1,0 0 0,0,0 0 0 37.207 0 0 133.273 0 0 128.356 0 0 chimp,cow,horse,human,macaque,marmoset,orangutan, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000226276.1 ENST00000413311.1 chr2:216804031-216806442 2 377 2032 intergenic -10.26 1 0,0,1 0 0,0,0 0 0 28.885 0 1.39271653543307 4.677 0 5.85875984251969 7.878 0 0 NA lincRNA lincRNA A549@0.083017,AG04450@0,BJ@0.0188805,GM12878@0.530114,H1HESC@0.23072,HELAS3@0.129361,HEPG2@0.083159,HMEC@0.010804,HSMM@0,HUVEC@0,K562@0.0627925,MCF7@0.736187,NHEK@0.32662,NHLF@0,SKNSHRA@0.106518, 0 0 0 0 ENSG00000231092.1 ENST00000417481.1 chr2:217124318-217130853 2 782 5751 exonic 2.51 0 0,1,1 0 0,0,0 58.1521739130435 6.29281864023648 81.053 60.5601023017903 14.2316118935837 123.235 62.4590792838875 14.4065379933925 131.312 0 0 chimp,guinea_pig,human,macaque,marmoset,orangutan, antisense antisense A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000233581.1 ENST00000452736.1 chr2:217168048-217186460 3 572 17836 intronic -0.16 0 0,1,0 0 0,0,0 0 9.86628167750617 0 20.7482517482517 16.3080287059879 11.922 16.0174825174825 18.6918591612469 16.39 0 0 cat,chimp,cow,dog,elephant,horse,human,macaque,marmoset,orangutan,rabbit, antisense antisense A549@0,AG04450@0.003898,BJ@0.250783,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0.0134605,SKNSHRA@0, 0 0 0 0 ENSG00000235042.1 ENST00000457694.1 chr2:217250011-217277419 5 661 26739 exonic 0.17 0 0,0,0 0 0,0,0 38.7473524962179 17.4095515913086 0 12.6928895612708 18.3313886083997 0.305 10.9531013615734 17.9434907812558 2.58 0 0 cat,chimp,horse,human,macaque,marmoset,orangutan,rabbit, antisense antisense A549@0.0065185,AG04450@0.0367665,BJ@0.0204625,GM12878@0.007418,H1HESC@0.0198905,HELAS3@0.0945535,HEPG2@0.0829775,HMEC@0,HSMM@0.005618,HUVEC@0.0073015,K562@0,MCF7@0.0121435,NHEK@0.00198233,NHLF@0,SKNSHRA@0.075925, 0 0 0 0 ENSG00000232485.2 ENST00000453157.1 chr2:217343753-217363484 3 509 19218 exonic 3.62 0 0,1,1 1 0,0,0 0 7.56800915808097 56.304 5.58153241650295 5.35029659694037 83.748 7.04322200392927 7.34608179831408 108.22 0 0 chimp,human,macaque,orangutan, antisense antisense A549@0.247497,AG04450@0.292664,BJ@0.221307,GM12878@0.273235,H1HESC@0.0061365,HELAS3@0.79609,HEPG2@0.414533,HMEC@0.177494,HSMM@0.083246,HUVEC@0.0989795,K562@0.109591,MCF7@0.203693,NHEK@0.604113,NHLF@0.0711325,SKNSHRA@0.391135, 0 0 0 0 ENSG00000241520.1 ENST00000414135.1 chr2:217347755-217351919 2 974 3188 exonic 1.62 1 0,0,1 0 0,0,0 0 0 0 0 0 0 3.74229979466119 0 0 0 0 chimp,cow,human,macaque,marmoset,orangutan,panda, antisense antisense A549@0.0325165,AG04450@0.0462745,BJ@0.0332165,GM12878@0.0589745,H1HESC@0.0042935,HELAS3@0.0642775,HEPG2@0.052888,HMEC@0.018959,HSMM@0.000871,HUVEC@0.0261035,K562@0.026513,MCF7@0.0170175,NHEK@0.037641,NHLF@0.005165,SKNSHRA@0.0827935, 0 0 0 0 ENSG00000232485.2 ENST00000438978.1 chr2:217351494-217363469 2 748 11225 exonic 3.47 0 0,1,0 1 0,0,0 0 4.36187082405345 56.304 0 2.95296213808463 84.336 0 5.30093541202673 109.592 0 0 cat,chimp,dog,horse,human,macaque,orangutan,panda, antisense antisense A549@0.247497,AG04450@0.292664,BJ@0.221307,GM12878@0.273235,H1HESC@0.0061365,HELAS3@0.79609,HEPG2@0.414533,HMEC@0.177494,HSMM@0.083246,HUVEC@0.0989795,K562@0.109591,MCF7@0.203693,NHEK@0.604113,NHLF@0.0711325,SKNSHRA@0.391135, 0 0 0 0 ENSG00000232485.2 ENST00000431856.1 chr2:217352527-217363473 2 582 10362 exonic 2.44 0 0,1,0 1 0,0,0 0 4.7251495850222 56.304 0 3.19889982628836 84.336 0 5.74242424242424 109.592 0 0 chimp,horse,human,macaque,orangutan, antisense retained_intron A549@0.247497,AG04450@0.292664,BJ@0.221307,GM12878@0.273235,H1HESC@0.0061365,HELAS3@0.79609,HEPG2@0.414533,HMEC@0.177494,HSMM@0.083246,HUVEC@0.0989795,K562@0.109591,MCF7@0.203693,NHEK@0.604113,NHLF@0.0711325,SKNSHRA@0.391135, 0 0 0 0 ENSG00000241836.1 ENST00000427280.1 chr2:217384053-217394177 3 304 9816 intronic 7.99 0 0,0,0 0 0,0,0 41.1578947368421 4.36970252648737 0 15.4802631578947 10.2200488997555 0 15.3092105263158 10.299511002445 0 0 0 cat,chimp,cow,dog,guinea_pig,horse,human,macaque,orangutan,panda, processed_transcript processed_transcript A549@1.94185,AG04450@1.10565,BJ@0.38941,GM12878@1.4787,H1HESC@0.875279,HELAS3@0.320974,HEPG2@1.03395,HMEC@1.07867,HSMM@0.704952,HUVEC@0.394606,K562@2.59006,MCF7@0.649536,NHEK@2.5862,NHLF@0.916635,SKNSHRA@0.595239, 0 0 0 0 ENSG00000224391.1 ENST00000449783.1 chr2:217455149-217471661 4 1180 15326 intergenic 9.98 0 0,1,0 0 0,0,0 26.664406779661 1.04280307973379 49.68 23.8974576271186 5.57895080255774 58.982 23.5330508474576 5.95948062116665 57.146 0 0 chimp,dog,horse,human,macaque,orangutan, antisense antisense A549@0,AG04450@0,BJ@0,GM12878@0.0118785,H1HESC@0.0168015,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0.001961,MCF7@0.0233345,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000225794.1 ENST00000441803.1 chr2:217469494-217475925 2 652 5777 intergenic 14.10 1 0,0,1 0 0,1,0 57.9754601226994 25.988575385148 0 87.7791411042945 24.1299982689977 0 184.024539877301 56.4729098147828 0 0 1 chimp,human,marmoset,orangutan, lincRNA lincRNA A549@0.016894,AG04450@0,BJ@0.014801,GM12878@0.0162415,H1HESC@0.062601,HELAS3@0.043872,HEPG2@0.0260625,HMEC@0,HSMM@0,HUVEC@0,K562@0.0166705,MCF7@0,NHEK@0.0141013,NHLF@0,SKNSHRA@0.0069505, 0 0 0 0 ENSG00000236886.1 ENST00000447289.1 chr2:217559187-217858722 4 548 298981 exonic 4.26 0 0,1,0 0 0,0,0 310.549270072993 9.34689160849686 72.771 324.335766423358 14.9899558834842 44.441 348.640510948905 16.9658874644208 31.988 0 0 cat,chimp,cow,dog,elephant,guinea_pig,horse,human,macaque,marmoset,mouse,opossum,orangutan,panda,pig,rabbit,rat, processed_transcript processed_transcript A549@0,AG04450@0.0363245,BJ@0.0176885,GM12878@0,H1HESC@0.0053835,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0.0041295,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0.006991,SKNSHRA@0.0315435, 0 0 0 0 ENSG00000229352.1 ENST00000434973.1 chr2:217664331-217670058 2 687 5038 intergenic -1.74 0 0,0,1 0 0,0,0 0 33.2304485907106 0 1.85589519650655 31.9315204446209 0 1.88500727802038 34.5786026200873 0 0 0 chimp,elephant,horse,human,macaque,orangutan,pig, lincRNA lincRNA A549@0,AG04450@0.006506,BJ@0,GM12878@0,H1HESC@0.015631,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0.002984,NHEK@0.00574833,NHLF@0,SKNSHRA@0.0101245, 0 0 0 0 ENSG00000231597.1 ENST00000440900.1 chr2:217719112-217719855 2 581 160 intergenic -1.51 0 0,0,0 0 0,0,0 0 0 21.272 0 0 37.466 0 0 30.454 0 0 chimp,cow,dog,elephant,guinea_pig,horse,human,macaque,marmoset,orangutan,panda, antisense antisense A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000237479.1 ENST00000421907.1 chr2:217731055-217732536 2 428 1051 intergenic 0.04 1 0,0,0 0 0,0,0 0 0 0 0 0 5.387 0 0 9.25 0 0 chimp,human,macaque,orangutan, antisense antisense A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0.00991,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000227021.1 ENST00000451711.1 chr2:217732735-217733879 2 539 603 intergenic 4.72 0 0,0,1 0 0,0,0 0 0 0 0 0 5.387 6.76252319109462 0 5.605 0 0 chimp,elephant,horse,human,macaque,marmoset,orangutan,rabbit, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0.00514, 0 0 0 0 ENSG00000236295.1 ENST00000418591.1 chr2:217735164-217738655 2 3133 356 exonic 8.88 0 0,0,0 0 0,0,0 0 0 0 10.2409830833067 6.06741573033708 0 9.71624640919247 4.87078651685393 0 0 0 chimp,human,macaque,marmoset,orangutan,pig, antisense antisense A549@0,AG04450@0,BJ@0,GM12878@0.0018655,H1HESC@0,HELAS3@0.002663,HEPG2@0.004616,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000233143.1 ENST00000452813.1 chr2:218147462-218200843 5 552 52821 intergenic -3.94 0 0,0,0 0 0,0,0 0 12.1442229416331 0 0 15.1938812214839 1.912 0 17.3141174911494 1.944 0 0 chimp,dog,human,macaque,marmoset,orangutan,panda, lincRNA lincRNA A549@0.0623925,AG04450@0.823741,BJ@0.070117,GM12878@0.003619,H1HESC@0,HELAS3@0,HEPG2@0.003825,HMEC@0,HSMM@0.695701,HUVEC@0.0226865,K562@0.008578,MCF7@0.0036915,NHEK@0,NHLF@0.177177,SKNSHRA@0.0444375, 0 0 0 0 ENSG00000223923.1 ENST00000450996.1 chr2:218843430-218857338 4 564 13338 exonic -4.40 0 0,1,0 1 0,0,0 119.996453900709 20.0128205128205 63.232 90.2393617021277 19.8732193732194 21.06 89.7163120567376 19.3915129704603 21.512 0 0 cat,chimp,dog,elephant,human,macaque,marmoset,orangutan,panda,rabbit, antisense antisense A549@0,AG04450@0,BJ@0,GM12878@0.0051485,H1HESC@0.319949,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0.406244,K562@0,MCF7@0.0144795,NHEK@0,NHLF@0.109302,SKNSHRA@0, 0 0 0 0 ENSG00000237281.1 ENST00000411433.1 chr2:219191612-219222689 4 531 30540 intronic -13.18 0 0,1,0 0 0,0,0 0 18.8597576948265 0 7.47269303201507 26.6784544859201 9.303 8.37664783427495 39.5038310412574 11.157 0 0 chimp,dog,human,macaque,marmoset,orangutan, antisense antisense A549@0.0258855,AG04450@0,BJ@0,GM12878@0.829398,H1HESC@0.0092505,HELAS3@0.196985,HEPG2@0.344083,HMEC@0,HSMM@0,HUVEC@0,K562@0.0137745,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000225062.1 ENST00000441749.1 chr2:219231388-219232558 3 477 689 exonic 0 1 1,1,1 0 0,0,0 29.5324947589099 24.8258345428157 5.94 63.7945492662474 62.9492017416546 17.235 82.2054507337526 72.467343976778 18.725 0 0 chimp,elephant,human,macaque,marmoset,orangutan, antisense antisense A549@0.266655,AG04450@0.0207685,BJ@0.080175,GM12878@0.300415,H1HESC@0.195625,HELAS3@0.015781,HEPG2@0.219319,HMEC@0.024339,HSMM@0,HUVEC@0.048463,K562@0.37424,MCF7@0.0842095,NHEK@0.0309103,NHLF@0,SKNSHRA@0.0391955, 0 0 0 0 ENSG00000225062.1 ENST00000425481.1 chr2:219231389-219232045 2 527 127 exonic 4.32 1 0,0,1 0 0,0,0 43.0796963946869 0 14.96 53.573055028463 0 63.603 47.1062618595825 0 83.914 0 0 cat,chimp,guinea_pig,human,macaque,marmoset,mouse,orangutan,pig,rabbit, antisense retained_intron A549@0.266655,AG04450@0.0207685,BJ@0.080175,GM12878@0.300415,H1HESC@0.195625,HELAS3@0.015781,HEPG2@0.219319,HMEC@0.024339,HSMM@0,HUVEC@0.048463,K562@0.37424,MCF7@0.0842095,NHEK@0.0309103,NHLF@0,SKNSHRA@0.0391955, 0 0 0 0 ENSG00000228135.1 ENST00000419511.1 chr2:219765533-219795358 5 1006 28811 intergenic 3.27 1 0,0,0 0 0,0,0 16.3926441351889 7.34722848911874 0 18.3747514910537 6.26535003991531 0 19.5019880715706 8.19391898927493 0 0 0 chimp,human,macaque,marmoset,orangutan, antisense antisense A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0.0447555, 0 0 0 0 ENSG00000235024.1 ENST00000429343.1 chr2:219809351-219826625 2 551 16721 exonic -1.07 0 0,0,0 0 0,0,0 0 69.9954548172956 117.766 2.31397459165154 75.2162550086717 153.309 69.8475499092559 91.8516237067161 133.851 0 0 chimp,human,macaque,marmoset,orangutan, processed_transcript processed_transcript A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0.0271005,HELAS3@0.004086,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0.180957, 0 0 0 0 ENSG00000236445.1 ENST00000419101.1 chr2:219841006-219842643 2 1553 82 intergenic 2.79 0 0,0,0 0 0,0,0 0 0 0 4.15196394075982 0 0 4.39407598197038 0 0 0 0 chimp,human,macaque,marmoset,orangutan, lincRNA processed_transcript A549@0,AG04450@0,BJ@0.0062435,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0.002633,HSMM@0,HUVEC@0,K562@0,MCF7@0.0007295,NHEK@0,NHLF@0,SKNSHRA@0.0008065, 0 0 0 0 ENSG00000236445.1 ENST00000432733.1 chr2:219841006-219844382 2 2816 558 intergenic 2.79 1 0,0,0 0 0,0,0 0 0 0 1.32102272727273 4.88888888888889 0 1.41157670454545 5.10573476702509 0 0 0 chimp,human,macaque,orangutan, lincRNA processed_transcript A549@0,AG04450@0,BJ@0.0062435,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0.002633,HSMM@0,HUVEC@0,K562@0,MCF7@0.0007295,NHEK@0,NHLF@0,SKNSHRA@0.0008065, 0 0 0 0 ENSG00000224090.1 ENST00000441450.1 chr2:219866937-219880443 3 1989 11513 exonic 3.72 0 0,1,0 0 0,0,0 35.24534942182 30.6060974550508 131.997 44.1382604323781 44.7956223399635 217.964 453.573655103067 42.6230348301919 180.857 0 0 chimp,human,macaque,marmoset,orangutan, lincRNA processed_transcript A549@0.002773,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0.002466,MCF7@0.041466,NHEK@0,NHLF@0,SKNSHRA@0.0674145, 0 0 0 0 ENSG00000230432.1 ENST00000417355.1 chr2:220163724-220168852 3 308 4816 exonic -1.22 0 1,1,1 1 0,0,0 106.363636363636 53.9981312292359 39.246 126 104.893480066445 47.593 136.467532467532 103.086171096346 44.916 0 0 chimp,cow,dog,elephant,horse,human,macaque,marmoset,opossum,orangutan,pig,platypus, antisense antisense A549@0,AG04450@0.0147795,BJ@0.007781,GM12878@0.379862,H1HESC@0.226552,HELAS3@0.0134215,HEPG2@0.666039,HMEC@0,HSMM@0.0146595,HUVEC@0,K562@0.0153635,MCF7@0,NHEK@0.012314,NHLF@0,SKNSHRA@0.0145905, 0 0 0 0 ENSG00000229525.1 ENST00000420563.1 chr2:220253218-220268355 2 1596 13539 exonic 0.15 0 1,1,1 0 0,0,0 23.5275689223058 32.4090405495236 0 25.3671679197995 23.2431494201935 0 26.9699248120301 22.1234212275648 2.072 0 0 cat,chimp,elephant,guinea_pig,human,macaque,orangutan,panda,pig,rat, lincRNA processed_transcript A549@0.0639405,AG04450@0.0375925,BJ@0.047366,GM12878@0.008801,H1HESC@0.200101,HELAS3@0.029791,HEPG2@0.178824,HMEC@0.017936,HSMM@0.011134,HUVEC@0,K562@0.211989,MCF7@0.823151,NHEK@0.0483857,NHLF@0.0109485,SKNSHRA@0.212116, 0 0 0 0 ENSG00000234638.1 ENST00000431827.1 chr2:220289793-220290906 2 222 889 exonic -0.16 0 0,1,0 0 0,0,0 0 75.8897637795276 62.192 15.4009009009009 78.0033745781777 70.956 23.6216216216216 88.7649043869516 63.855 0 0 chimp,cow,dog,elephant,human,macaque,marmoset,orangutan,panda,rabbit, antisense antisense A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000227432.1 ENST00000429882.1 chr2:220346795-220381599 2 517 34285 intronic 8.08 0 0,0,1 0 0,0,0 32.3404255319149 137.654892810267 5.568 3.45261121856867 150.880093335278 32.949 17.2185686653772 138.104068834767 39.849 0 0 chimp,cow,dog,horse,human,macaque,marmoset,mouse,orangutan,panda, antisense antisense A549@0.002002,AG04450@0,BJ@0,GM12878@0,H1HESC@0.0150065,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0.011854, 0 0 0 0 ENSG00000228973.1 ENST00000455896.1 chr2:220489781-220491415 2 269 1363 intronic 1.60 0 0,1,0 0 0,0,0 0 0 67.465 0 0 107.435 0 0 107.154 0 0 chimp,human,macaque,marmoset,orangutan, antisense antisense A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0.0156377,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000227308.1 ENST00000416861.1 chr2:220551709-220579408 2 494 27203 intronic -9.75 0 0,0,1 0 0,0,0 0 30.2846009631291 0 0 24.0662426938205 0 0 39.5174429290887 0 0 0 chimp,human,macaque,marmoset,orangutan, processed_transcript processed_transcript A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0.0179745,HELAS3@0.0084155,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0.00257367,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000235667.1 ENST00000442416.1 chr2:220594832-220602464 2 359 7271 intergenic -0.46 0 0,0,1 0 0,0,0 0 9.02406821620135 161.634 0 15.7815981295558 167.705 0 16.8185944161738 142.418 0 0 cat,chimp,cow,dog,guinea_pig,horse,human,macaque,marmoset,orangutan,panda, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0.0147115,H1HESC@0.0164645,HELAS3@0,HEPG2@0.153462,HMEC@0.022685,HSMM@0,HUVEC@0,K562@0.0226505,MCF7@0.028225,NHEK@0.249009,NHLF@0,SKNSHRA@0.112613, 0 0 0 0 ENSG00000228909.1 ENST00000438659.1 chr2:220768772-220769610 3 610 224 intergenic 1.57 0 0,0,0 0 0,0,0 0 0 0 7.84590163934426 0 0 4.57868852459016 0 0 0 0 cat,chimp,dog,guinea_pig,horse,human,macaque,marmoset,orangutan,panda,pig, lincRNA lincRNA A549@0,AG04450@0.0074985,BJ@0.0116735,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000239498.1 ENST00000432993.1 chr2:220970377-221315499 4 750 344366 intergenic -1.92 0 0,0,0 0 0,0,0 0 32.1663288477957 53.278 0 36.8137591980626 96.52 0 36.5608974172828 91.379 0 0 chimp,horse,human,macaque,marmoset,orangutan, lincRNA lincRNA A549@0,AG04450@0.0042765,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0.00173733,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000235337.1 ENST00000438633.1 chr2:220992267-221077212 3 344 84597 intergenic 0 0 0,0,0 0 0,0,0 252.808139534884 36.2329515231037 0 211.872093023256 40.4752532595719 2.39 199.308139534884 39.9582963934891 2.59 0 0 cat,chimp,dog,horse,human,macaque,marmoset,orangutan,panda,rabbit, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0.00433867,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000236451.2 ENST00000414512.1 chr2:221315400-221569286 5 2057 251821 intergenic 0.28 0 0,0,1 0 0,0,0 19.3130772970345 24.4037550482287 0 44.7131745260087 28.2192827444891 0 48.6285853184249 28.7017643484856 0 0 0 cat,chimp,dog,horse,human,macaque,marmoset,mouse,opossum,orangutan,rat, lincRNA lincRNA A549@0,AG04450@0.0061875,BJ@0.0015695,GM12878@0.0021145,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0.014824,NHEK@0.0326983,NHLF@0.0018825,SKNSHRA@0.0037975, 0 0 0 0 ENSG00000224819.1 ENST00000424395.1 chr2:221655798-221662613 2 510 6303 intergenic 3.12 0 0,0,0 0 0,0,0 2.94117647058824 8.82547993019197 145.121 0 18.9067110899572 98.759 0 20.1648421386641 119.034 0 0 chimp,cow,dog,guinea_pig,human,macaque,marmoset,orangutan,panda,pig, lincRNA lincRNA A549@0,AG04450@0.0133555,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0.007997,HSMM@0.016942,HUVEC@0,K562@0,MCF7@0.012047,NHEK@0.047087,NHLF@0,SKNSHRA@0.0088625, 0 0 0 0 ENSG00000234446.2 ENST00000453706.2 chr2:222502263-222506533 2 259 4009 intergenic 0 0 0,1,0 0 0,0,0 0 0 0 0 0 0 0 0 1.944 1 1 chimp,human,macaque,marmoset,orangutan, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000237732.3 ENST00000542880.1 chr2:223182996-223186440 3 1342 2098 intergenic 15.81 0 0,0,1 0 0,0,0 91.2786885245902 80.7707340324118 209.974 85.0596125186289 149.973307912297 147.697 102.347242921013 170.754528122021 120.487 0 0 chimp,cow,elephant,guinea_pig,human,marmoset,pig,rat, lincRNA processed_transcript A549@0.029526,AG04450@0.0110055,BJ@0.026347,GM12878@0.22096,H1HESC@0.0036795,HELAS3@0.0101535,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0.0585385,NHEK@0.00154367,NHLF@0,SKNSHRA@0.104251, 0 0 0 0 ENSG00000237732.3 ENST00000424010.1 chr2:223185393-223186378 2 347 636 intergenic 1.00 0 0,1,1 0 0,0,0 0 0 123.089 22.3804034582133 0 189.813 44.4265129682997 0 202.551 0 0 chimp,dog,elephant,guinea_pig,human,marmoset,orangutan,panda,pig,rabbit, lincRNA processed_transcript A549@0.029526,AG04450@0.0110055,BJ@0.026347,GM12878@0.22096,H1HESC@0.0036795,HELAS3@0.0101535,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0.0585385,NHEK@0.00154367,NHLF@0,SKNSHRA@0.104251, 0 0 0 0 ENSG00000237732.3 ENST00000429475.1 chr2:223185413-223186441 2 825 201 intergenic 1.75 0 0,1,1 0 0,0,0 0 0 118.129 9.41333333333333 0 179.213 18.6860606060606 0 190.091 0 0 chimp,cow,elephant,horse,human,marmoset,orangutan,panda,pig, lincRNA processed_transcript A549@0.029526,AG04450@0.0110055,BJ@0.026347,GM12878@0.22096,H1HESC@0.0036795,HELAS3@0.0101535,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0.0585385,NHEK@0.00154367,NHLF@0,SKNSHRA@0.104251, 0 0 0 0 ENSG00000237732.3 ENST00000446532.1 chr2:223185582-223186441 2 400 457 intergenic -7.79 0 0,0,1 0 0,0,0 0 0 98.716 0 0 130.595 5.4675 0 129.908 0 0 chimp,cow,elephant,horse,human,marmoset,orangutan,panda,pig, lincRNA processed_transcript A549@0.029526,AG04450@0.0110055,BJ@0.026347,GM12878@0.22096,H1HESC@0.0036795,HELAS3@0.0101535,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0.0585385,NHEK@0.00154367,NHLF@0,SKNSHRA@0.104251, 0 0 0 0 ENSG00000237732.3 ENST00000439237.1 chr2:223185825-223186257 2 341 89 intergenic -4.26 0 0,0,1 0 0,0,0 0 0 57.54 0 0 65.094 0 0 62.12 0 0 chimp,horse,human,marmoset,orangutan,pig, lincRNA processed_transcript A549@0.029526,AG04450@0.0110055,BJ@0.026347,GM12878@0.22096,H1HESC@0.0036795,HELAS3@0.0101535,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0.0585385,NHEK@0.00154367,NHLF@0,SKNSHRA@0.104251, 0 0 0 0 ENSG00000234193.1 ENST00000446709.1 chr2:223782105-223784081 2 535 1439 intronic -2.95 0 0,0,1 0 0,0,0 0 63.3968033356498 0 0 71.683808200139 0 14.0803738317757 77.7387074357192 0 0 0 cat,chimp,cow,dog,elephant,guinea_pig,horse,human,macaque,marmoset,orangutan,panda,pig,rabbit, antisense antisense A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000231189.1 ENST00000422118.1 chr2:224363491-224369329 3 805 5029 intergenic 5.08 0 0,0,0 0 0,0,0 0 19.6166235832173 0 0 17.5671107576059 0 0 17.1304434281169 0 0 0 chimp,human,macaque,marmoset,orangutan, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0.0112415, 0 0 0 0 ENSG00000235610.1 ENST00000440341.1 chr2:224370194-224375651 2 785 4670 intergenic -1.26 0 0,0,1 0 0,0,0 0 0 0 1.46496815286624 9.70920770877944 1.673 1.54777070063694 13.4139186295503 1.757 0 0 chimp,dog,horse,human,macaque,marmoset,orangutan,panda, lincRNA lincRNA A549@0,AG04450@0.0075235,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000228802.1 ENST00000425192.1 chr2:224830418-224832423 2 427 1576 exonic -14.77 0 0,1,1 0 0,0,0 0 19.1085025380711 0 0 23.9473350253807 0 0 37.0412436548223 1.88 0 0 chimp,human,macaque,marmoset,orangutan, antisense antisense A549@0,AG04450@0.012741,BJ@0,GM12878@0.009398,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000232784.1 ENST00000431435.1 chr2:226264426-226265304 2 572 304 intergenic -0.77 0 0,0,0 0 0,0,0 566.998251748252 761 57.99 581.006993006993 806 72.689 579.073426573427 810 73.721 0 0 cat,chimp,cow,dog,elephant,guinea_pig,horse,human,macaque,marmoset,mouse,opossum,orangutan,panda,pig,platypus,rabbit,rat, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0.007024,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0.0812125, 0 0 0 0 ENSG00000235070.2 ENST00000423838.1 chr2:227044760-227050087 2 1132 4193 intergenic 5.16 0 0,1,0 0 0,0,0 17.976148409894 19.7553064631529 433.171 21.3992932862191 32.9926067254949 304.014 16.469964664311 23.6110183639399 276.115 0 0 chimp,cow,dog,elephant,guinea_pig,horse,human,macaque,marmoset,orangutan,panda,rabbit, lincRNA lincRNA A549@0.0883415,AG04450@0.134764,BJ@0.0906965,GM12878@0.083417,H1HESC@0.0036585,HELAS3@0.0486315,HEPG2@0.016838,HMEC@0.003611,HSMM@0.117834,HUVEC@0,K562@0,MCF7@0.003546,NHEK@0.201536,NHLF@0.0292125,SKNSHRA@0.065768, 0 0 0 0 ENSG00000236432.2 ENST00000439598.2 chr2:228085768-228189880 14 2554 101532 exonic 1.38 1 0,1,0 1 0,0,0 4.43711804438726 17.1856102995791 19.045 9.99774847217755 20.5691804902203 90.457 11.1968478610486 21.3900371379054 87.568 0 0 chimp,human,macaque,marmoset,orangutan, antisense antisense A549@0.16737,AG04450@0.251027,BJ@0.075309,GM12878@0.11265,H1HESC@0.135047,HELAS3@0.445159,HEPG2@0.309941,HMEC@0.014668,HSMM@0.14701,HUVEC@0.0174285,K562@0.0563005,MCF7@0.0593375,NHEK@0.135126,NHLF@0.0702665,SKNSHRA@0.156654, 0 0 0 0 ENSG00000236432.2 ENST00000437673.1 chr2:228102824-228129889 3 675 26386 intronic 1.38 0 0,0,0 0 0,0,0 0 14.9134768437808 0 0 21.6061926779353 0 0 23.3477222769651 0 0 0 chimp,elephant,human,macaque,marmoset,orangutan,panda, antisense antisense A549@0.16737,AG04450@0.251027,BJ@0.075309,GM12878@0.11265,H1HESC@0.135047,HELAS3@0.445159,HEPG2@0.309941,HMEC@0.014668,HSMM@0.14701,HUVEC@0.0174285,K562@0.0563005,MCF7@0.0593375,NHEK@0.135126,NHLF@0.0702665,SKNSHRA@0.156654, 0 0 0 0 ENSG00000236432.2 ENST00000396588.2 chr2:228110426-228189902 10 2204 77254 exonic 1.38 0 1,1,1 1 0,0,0 0 18.6836927537733 19.045 5.45689655172414 24.0427809563259 90.457 7.37704174228675 25.0110544437828 87.568 0 0 chimp,human,macaque,marmoset,orangutan, antisense antisense A549@0.16737,AG04450@0.251027,BJ@0.075309,GM12878@0.11265,H1HESC@0.135047,HELAS3@0.445159,HEPG2@0.309941,HMEC@0.014668,HSMM@0.14701,HUVEC@0.0174285,K562@0.0563005,MCF7@0.0593375,NHEK@0.135126,NHLF@0.0702665,SKNSHRA@0.156654, 0 0 0 0 ENSG00000236432.2 ENST00000433324.1 chr2:228133461-228189917 4 237 56213 exonic 0 0 0,1,0 1 0,0,0 0 21.7388682333268 19.045 4.13924050632911 25.3300837884475 89.149 4.34177215189873 25.8900788073933 86.196 0 0 cat,chimp,dog,horse,human,macaque,marmoset,orangutan,panda, antisense antisense A549@0.16737,AG04450@0.251027,BJ@0.075309,GM12878@0.11265,H1HESC@0.135047,HELAS3@0.445159,HEPG2@0.309941,HMEC@0.014668,HSMM@0.14701,HUVEC@0.0174285,K562@0.0563005,MCF7@0.0593375,NHEK@0.135126,NHLF@0.0702665,SKNSHRA@0.156654, 0 0 0 0 ENSG00000236116.1 ENST00000413096.1 chr2:228481714-228482506 2 538 252 intronic -2.61 0 0,1,0 0 0,0,0 0 0 0 119.137546468401 0 8.118 125.232342007435 25.9444444444444 11.339 0 0 chimp,cow,dog,elephant,guinea_pig,horse,human,macaque,marmoset,orangutan,panda,pig,rabbit,rat, sense_intronic sense_intronic A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0.0056845,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000232023.2 ENST00000432481.2 chr2:229347977-229476111 4 672 127456 intergenic -0.42 1 0,0,0 0 0,0,0 0 0.272412007469362 0 0 0.888336184035024 0 0 1.34732530952344 0 0 0 chimp,human,macaque,marmoset,orangutan,panda, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0.0104025,H1HESC@0,HELAS3@0.138306,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0.057047,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000228226.1 ENST00000442062.1 chr2:229548253-229549296 2 425 616 intergenic -6.83 0 0,0,0 0 0,0,0 0 0 0 0 0 0 0 0 0 0 0 chimp,elephant,human,macaque,marmoset,orangutan, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000231534.1 ENST00000432957.1 chr2:230807444-230809853 2 580 1827 intronic -0.22 0 0,0,0 0 0,0,0 0 0 0 0 0 0 0 11.4028461959496 0 0 0 chimp,human,macaque,marmoset,orangutan,panda, sense_intronic sense_intronic A549@0.212799,AG04450@0.118008,BJ@0.060923,GM12878@0.0385105,H1HESC@0.571921,HELAS3@0.132826,HEPG2@0.177047,HMEC@0,HSMM@0.146106,HUVEC@0.262595,K562@0.071997,MCF7@0.468156,NHEK@0.19302,NHLF@0,SKNSHRA@0.260089, 0 0 0 0 ENSG00000231578.1 ENST00000445199.1 chr2:230990026-231032210 3 514 41666 intergenic -3.12 0 0,1,1 0 0,0,0 0 0.295684730955695 14.135 1.02334630350195 2.03580857293717 16.921 1.05836575875486 7.55419286708587 17.505 0 0 cat,chimp,guinea_pig,human,macaque,marmoset,orangutan,pig, antisense antisense A549@0,AG04450@0.045241,BJ@0,GM12878@0.014724,H1HESC@0.022993,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0.003977,NHEK@0,NHLF@0.029857,SKNSHRA@0.0838315, 0 0 0 0 ENSG00000225963.1 ENST00000454058.1 chr2:231036839-231038822 2 488 1493 exonic -3.63 0 0,0,0 0 0,0,0 0 4.77561955793704 0 7.19262295081967 4.63027461486939 6.66 13.297131147541 5.77160080375084 15.748 0 0 chimp,human,macaque,marmoset,orangutan, antisense antisense A549@0,AG04450@0.0096125,BJ@0,GM12878@0,H1HESC@0.047515,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0.0641525, 0 0 0 0 ENSG00000243565.1 ENST00000441657.1 chr2:231068340-231078874 3 384 10146 intronic 2.39 0 0,0,0 0 0,0,0 0 0 0 0 2.09057756751429 0 0 2.44332741967278 0 0 0 chimp,cow,guinea_pig,horse,human,macaque,marmoset,orangutan, processed_transcript processed_transcript A549@0,AG04450@0,BJ@0,GM12878@0.361528,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0.0131525,SKNSHRA@0, 0 0 0 0 ENSG00000235419.1 ENST00000455357.1 chr2:231385309-231444721 7 564 58836 intronic 1.26 0 0,1,0 0 0,0,0 0 3.61373988714393 0 0 4.20628526752329 0 0 13.0586545652322 0 0 0 chimp,human,macaque,orangutan, processed_transcript processed_transcript A549@0,AG04450@0,BJ@0,GM12878@0.337075,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000235419.1 ENST00000414539.1 chr2:231403003-231444648 6 457 41178 intronic -5.61 0 0,1,0 0 0,0,0 0 5.16338821700908 0 0 6.01002962747098 0 0 18.6584826849288 0 0 0 chimp,human,macaque,orangutan, processed_transcript processed_transcript A549@0,AG04450@0,BJ@0,GM12878@0.337075,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000226125.1 ENST00000415174.1 chr2:231555636-231565244 4 2605 6997 intergenic 0.55 0 0,0,0 0 0,0,0 0 0 0 1.90710172744722 1.43375732456767 0 1.99692898272553 2.36558525082178 0 0 0 chimp,dog,human,macaque,orangutan, lincRNA lincRNA A549@0.0099425,AG04450@0.0034365,BJ@0.016702,GM12878@0.035253,H1HESC@0.01877,HELAS3@0,HEPG2@0.011129,HMEC@0.072193,HSMM@0,HUVEC@0.006407,K562@0.0171165,MCF7@0.010963,NHEK@0.138559,NHLF@0.012654,SKNSHRA@0.041966, 0 0 0 0 ENSG00000232520.1 ENST00000447074.1 chr2:231751215-231760183 2 555 8411 intergenic 2.91 0 0,0,0 0 0,0,0 0 5.73748662465819 68.908 0 3.83153013910356 63.005 0 4.01272143621448 65.558 0 0 cat,chimp,horse,human,macaque,marmoset,orangutan,panda, antisense antisense A549@0,AG04450@0.0033545,BJ@0,GM12878@0,H1HESC@0.003298,HELAS3@0.023019,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0.0104355,NHEK@0,NHLF@0,SKNSHRA@0.0250565, 0 0 0 0 ENSG00000232520.1 ENST00000455128.1 chr2:231751221-231758789 2 542 7024 intergenic 2.91 0 0,0,0 0 0,0,0 0 0 68.908 0 2.54584282460137 63.005 0 2.69162870159453 65.558 0 0 cat,chimp,horse,human,macaque,marmoset,orangutan,panda, antisense antisense A549@0,AG04450@0.0033545,BJ@0,GM12878@0,H1HESC@0.003298,HELAS3@0.023019,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0.0104355,NHEK@0,NHLF@0,SKNSHRA@0.0250565, 0 0 0 0 ENSG00000232520.1 ENST00000415628.1 chr2:231751261-231761806 3 1762 8779 intergenic 2.91 0 0,1,0 0 0,0,0 0 5.49698143296503 68.908 1.54824063564132 3.67091923909329 63.005 1.56696935300795 3.84451532065155 65.558 0 0 chimp,dog,horse,human,macaque,marmoset,orangutan,panda, antisense antisense A549@0,AG04450@0.0033545,BJ@0,GM12878@0,H1HESC@0.003298,HELAS3@0.023019,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0.0104355,NHEK@0,NHLF@0,SKNSHRA@0.0250565, 0 0 0 0 ENSG00000232520.1 ENST00000434807.1 chr2:231751530-231752453 2 511 410 intergenic 2.91 0 0,0,1 0 0,0,0 0 0 68.908 0 0 63.005 0 0 65.558 0 0 chimp,human,macaque,marmoset,orangutan, antisense antisense A549@0,AG04450@0.0033545,BJ@0,GM12878@0,H1HESC@0.003298,HELAS3@0.023019,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0.0104355,NHEK@0,NHLF@0,SKNSHRA@0.0250565, 0 0 0 0 ENSG00000230385.1 ENST00000454890.1 chr2:231773567-231774817 2 598 650 exonic 2.62 0 0,0,0 0 0,0,0 63.252508361204 0 0 32.0635451505017 0 0 40.8277591973244 0 0 0 0 cat,chimp,dog,elephant,horse,human,macaque,marmoset,orangutan,panda,pig, antisense antisense A549@0.0072355,AG04450@0.036317,BJ@0.0164135,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0.006824,HSMM@0.0068585,HUVEC@0,K562@0.328634,MCF7@0,NHEK@0.045457,NHLF@0.161991,SKNSHRA@0, 0 0 0 0 ENSG00000238062.1 ENST00000414876.1 chr2:231849083-231860746 6 3502 8151 intergenic 1.40 1 0,0,1 0 0,0,0 0 3.83633909949699 26.571 5.49257567104512 8.74923322291743 33.567 6.40005711022273 10.4935590725064 33.837 0 0 chimp,human,macaque,orangutan, lincRNA processed_transcript A549@0.103087,AG04450@0.0111325,BJ@0.002992,GM12878@0.238594,H1HESC@0.189169,HELAS3@0.0543135,HEPG2@0.0241705,HMEC@0.168998,HSMM@0,HUVEC@0,K562@0.017045,MCF7@0.0367265,NHEK@0,NHLF@0.001106,SKNSHRA@0.014032, 0 0 0 0 ENSG00000238062.1 ENST00000446741.1 chr2:231852357-231860747 4 1096 7288 intergenic 4.74 0 0,0,1 0 0,0,0 0 4.29061470911087 26.571 0 9.7852634467618 33.567 0.221715328467153 11.7361416026345 33.837 0 0 chimp,human,marmoset,orangutan,panda, lincRNA processed_transcript A549@0.103087,AG04450@0.0111325,BJ@0.002992,GM12878@0.238594,H1HESC@0.189169,HELAS3@0.0543135,HEPG2@0.0241705,HMEC@0.168998,HSMM@0,HUVEC@0,K562@0.017045,MCF7@0.0367265,NHEK@0,NHLF@0.001106,SKNSHRA@0.014032, 0 0 0 0 ENSG00000238062.1 ENST00000434094.1 chr2:231852508-231860723 3 774 7437 intergenic 0.30 0 0,0,1 0 0,0,0 0 4.20465241360764 26.571 0 9.5892160817534 33.567 0.313953488372093 11.5010084711577 33.837 0 0 chimp,human,macaque,marmoset,orangutan,panda, lincRNA processed_transcript A549@0.103087,AG04450@0.0111325,BJ@0.002992,GM12878@0.238594,H1HESC@0.189169,HELAS3@0.0543135,HEPG2@0.0241705,HMEC@0.168998,HSMM@0,HUVEC@0,K562@0.017045,MCF7@0.0367265,NHEK@0,NHLF@0.001106,SKNSHRA@0.014032, 0 0 0 0 ENSG00000238062.1 ENST00000418330.1 chr2:231852694-231860727 3 472 7557 intergenic 0.71 0 0,0,0 0 0,0,0 0 4.13788540426095 26.571 0 9.43694587799391 33.567 0.514830508474576 11.3183803096467 33.837 0 0 chimp,human,macaque,marmoset,orangutan, lincRNA processed_transcript A549@0.103087,AG04450@0.0111325,BJ@0.002992,GM12878@0.238594,H1HESC@0.189169,HELAS3@0.0543135,HEPG2@0.0241705,HMEC@0.168998,HSMM@0,HUVEC@0,K562@0.017045,MCF7@0.0367265,NHEK@0,NHLF@0.001106,SKNSHRA@0.014032, 0 0 0 0 ENSG00000238062.1 ENST00000426904.1 chr2:231852760-231860747 5 761 7218 intergenic 1.40 0 0,0,0 0 0,0,0 0 4.33222499307287 26.571 0 9.88016070933777 33.567 0.319316688567674 11.8499584372402 33.837 0 0 cat,chimp,human,macaque,marmoset,orangutan,panda, lincRNA processed_transcript A549@0.103087,AG04450@0.0111325,BJ@0.002992,GM12878@0.238594,H1HESC@0.189169,HELAS3@0.0543135,HEPG2@0.0241705,HMEC@0.168998,HSMM@0,HUVEC@0,K562@0.017045,MCF7@0.0367265,NHEK@0,NHLF@0.001106,SKNSHRA@0.014032, 0 0 0 0 ENSG00000238062.1 ENST00000441063.1 chr2:231852843-231860596 4 462 7285 intergenic 5.75 0 0,1,0 0 0,0,0 0 4.29238160603981 26.571 0 9.78929306794784 33.567 0.525974025974026 11.7409746053535 33.837 0 0 chimp,human,macaque,marmoset,orangutan,panda, lincRNA processed_transcript A549@0.103087,AG04450@0.0111325,BJ@0.002992,GM12878@0.238594,H1HESC@0.189169,HELAS3@0.0543135,HEPG2@0.0241705,HMEC@0.168998,HSMM@0,HUVEC@0,K562@0.017045,MCF7@0.0367265,NHEK@0,NHLF@0.001106,SKNSHRA@0.014032, 0 0 0 0 ENSG00000238062.1 ENST00000457803.1 chr2:231852886-231860744 4 503 7349 intergenic 0.71 0 0,0,0 0 0,0,0 0 4.25500068036468 26.571 0 9.70404136617227 33.567 0.483101391650099 11.6387263573275 33.837 0 0 cat,chimp,horse,human,macaque,marmoset,orangutan,panda, lincRNA processed_transcript A549@0.103087,AG04450@0.0111325,BJ@0.002992,GM12878@0.238594,H1HESC@0.189169,HELAS3@0.0543135,HEPG2@0.0241705,HMEC@0.168998,HSMM@0,HUVEC@0,K562@0.017045,MCF7@0.0367265,NHEK@0,NHLF@0.001106,SKNSHRA@0.014032, 0 0 0 0 ENSG00000224376.1 ENST00000415129.1 chr2:232253687-232259695 3 717 5287 intergenic 4.78 1 0,0,1 0 0,0,0 19.2189679218968 0 28.893 15.0878661087866 0 56.662 18.9832635983264 0 58.716 0 0 cat,chimp,cow,dog,guinea_pig,horse,human,macaque,marmoset,orangutan,panda,pig, lincRNA lincRNA A549@0.312756,AG04450@0.114165,BJ@0.276361,GM12878@6.48834,H1HESC@0.310497,HELAS3@0.10286,HEPG2@0.17451,HMEC@0.012081,HSMM@0.0922145,HUVEC@0.112532,K562@0.0137965,MCF7@0.120573,NHEK@0.100583,NHLF@0.0546005,SKNSHRA@0.385486, 0 0 0 0 ENSG00000224376.1 ENST00000418050.1 chr2:232258390-232259702 1 1312 0 intergenic 4.59 1 1,1,1 0 0,0,0 10.5030487804878 0 0 8.24542682926829 0 0 10.374237804878 0 0 0 1 chimp,human,macaque, lincRNA retained_intron A549@0.312756,AG04450@0.114165,BJ@0.276361,GM12878@6.48834,H1HESC@0.310497,HELAS3@0.10286,HEPG2@0.17451,HMEC@0.012081,HSMM@0.0922145,HUVEC@0.112532,K562@0.0137965,MCF7@0.120573,NHEK@0.100583,NHLF@0.0546005,SKNSHRA@0.385486, 0 0 0 0 ENSG00000224376.1 ENST00000454416.1 chr2:232258493-232259702 2 464 743 intergenic 1.40 1 1,1,1 0 0,0,0 0 0 13.78 0 0 10.818 0 0 13.611 0 0 cat,chimp,dog,horse,human,macaque,orangutan,panda, lincRNA lincRNA A549@0.312756,AG04450@0.114165,BJ@0.276361,GM12878@6.48834,H1HESC@0.310497,HELAS3@0.10286,HEPG2@0.17451,HMEC@0.012081,HSMM@0.0922145,HUVEC@0.112532,K562@0.0137965,MCF7@0.120573,NHEK@0.100583,NHLF@0.0546005,SKNSHRA@0.385486, 0 0 0 0 ENSG00000181798.2 ENST00000313064.2 chr2:232373137-232379050 3 1279 4630 intergenic 0.27 1 1,1,1 1 0,0,0 6.39874902267396 0 0 0 0 3.472 1.89992181391712 0 3.626 0 0 chimp,human,macaque,marmoset,orangutan, lincRNA processed_transcript A549@0.717304,AG04450@0.070171,BJ@0.164481,GM12878@0.632015,H1HESC@0.739492,HELAS3@0.378947,HEPG2@0.141114,HMEC@0.198342,HSMM@0.12349,HUVEC@0.127618,K562@0.710114,MCF7@0.523554,NHEK@0.115519,NHLF@0.080226,SKNSHRA@0.286388, 0 0 0 0 ENSG00000227033.1 ENST00000413841.1 chr2:232843198-232880430 2 389 36841 exonic -2.73 0 0,1,0 0 0,0,0 62.4421593830334 13.2225509622432 0 74.8226221079692 14.2715181455444 0 76.025706940874 18.3048777177601 0 0 0 cat,chimp,cow,dog,human,macaque,marmoset,mouse,orangutan,panda,pig,rabbit,rat, antisense antisense A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000224516.1 ENST00000441266.1 chr2:233244345-233246384 3 478 1557 exonic 6.36 0 0,0,0 0 0,0,0 0 0 0 161.347280334728 67.6673089274245 0 291.849372384937 119.976236351959 1.757 0 0 cat,chimp,cow,dog,elephant,guinea_pig,horse,human,macaque,marmoset,mouse,opossum,orangutan,panda,pig,platypus,rabbit,rat, antisense antisense A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0.0302515,HELAS3@0.0331055,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000224516.1 ENST00000439072.1 chr2:233244469-233245747 2 354 922 exonic 11.60 0 0,0,1 0 0,0,0 0 0 0 158.364406779661 71.0227765726681 53.837 351.536723163842 112.526030368764 80.371 0 0 cat,chimp,cow,dog,elephant,guinea_pig,horse,human,macaque,marmoset,mouse,opossum,orangutan,panda,pig,platypus,rabbit,rat, antisense antisense A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0.0302515,HELAS3@0.0331055,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000237087.1 ENST00000437095.1 chr2:233285371-233286171 2 574 224 intergenic 9.04 0 0,0,1 1 0,0,0 0 0 0 114.749128919861 0 0 90.315331010453 0 0 0 0 cat,chimp,cow,dog,guinea_pig,human,macaque,marmoset,mouse,orangutan,pig,rabbit,rat, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@2.51016,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0.003572,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000237126.1 ENST00000415506.1 chr2:233445658-233449243 3 740 2841 exonic 2.71 0 0,0,0 0 0,0,0 192.148648648649 100.378035902851 0 91.6 29.0879971840901 0 119.414864864865 99.4994720168955 0 0 0 cat,chimp,cow,dog,elephant,horse,human,macaque,marmoset,mouse,opossum,orangutan,pig, antisense antisense A549@0,AG04450@0.0031695,BJ@0,GM12878@0,H1HESC@0,HELAS3@0.003041,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000237126.1 ENST00000447488.1 chr2:233445861-233449247 2 384 3000 exonic 3.51 0 0,0,0 0 0,0,0 74.2447916666667 95.058 0 25.765625 27.5463333333333 0 35.1328125 299.336 0 0 0 cat,chimp,dog,horse,human,macaque,marmoset,opossum,orangutan, antisense antisense A549@0,AG04450@0.0031695,BJ@0,GM12878@0,H1HESC@0,HELAS3@0.003041,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000224814.1 ENST00000439336.1 chr2:234602080-234617345 2 661 14602 exonic 2.58 0 0,1,0 0 0,0,0 33.642965204236 0 0 107.733736762481 0.774140528694699 0 107.077155824508 1.04150116422408 0 0 0 chimp,cow,dog,elephant,guinea_pig,horse,human,macaque,marmoset,mouse,opossum,orangutan,platypus,rabbit,rat, antisense antisense A549@0.008332,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0.008006,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000237581.1 ENST00000455991.1 chr2:234854790-234864079 2 592 8695 exonic -2.15 0 0,0,0 0 0,0,0 76.9881756756757 12.964807360552 0 82.8141891891892 19.2379528464635 0 101.385135135135 21.4596894767108 0 0 0 chimp,cow,elephant,human,macaque,marmoset,orangutan,panda,pig, antisense antisense A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000226442.1 ENST00000437967.1 chr2:235017360-235018125 3 595 166 intergenic -4.86 0 0,0,1 0 0,0,0 0 0 36.005 9.88235294117647 0 28.533 10.2319327731092 0 28.729 0 0 chimp,cow,human,macaque,marmoset,orangutan, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000228162.1 ENST00000418025.1 chr2:235346972-235370771 3 559 23236 intergenic 3.07 0 0,0,0 0 0,0,0 0 3.69654845928731 47.286 0 4.44870029264934 27.088 0 12.5301256670683 31.257 0 0 chimp,human,macaque,orangutan, lincRNA lincRNA A549@0,AG04450@0.0041905,BJ@0,GM12878@0,H1HESC@0.0264815,HELAS3@0,HEPG2@0,HMEC@0.014572,HSMM@0.014645,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0.0034335,SKNSHRA@0, 0 0 0 0 ENSG00000231682.1 ENST00000439798.1 chr2:235353234-235363239 3 535 9466 intergenic 4.10 0 0,0,0 0 0,0,0 0 3.23293893936193 7.13 0 3.17050496513839 16.154 0 3.71286710331713 86.952 0 0 chimp,cow,horse,human,macaque,marmoset,orangutan, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0.0045995,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0.009999, 0 0 0 0 ENSG00000235726.1 ENST00000427619.1 chr2:235742959-235822028 4 703 78360 intergenic 8.04 0 0,0,0 0 0,0,0 0 1.00654670750383 0 0 1.62752679938744 0 0 1.90661051556917 0 0 0 chimp,human,macaque,marmoset,orangutan, lincRNA lincRNA A549@0.56815,AG04450@0.0411515,BJ@0.004408,GM12878@0,H1HESC@0.710983,HELAS3@0.007603,HEPG2@0.008638,HMEC@0,HSMM@0,HUVEC@0.18887,K562@0.125389,MCF7@0.324635,NHEK@0.104747,NHLF@0.016807,SKNSHRA@0, 0 0 0 0 ENSG00000235726.1 ENST00000435896.1 chr2:235743003-235797420 3 546 53867 intergenic 8.04 0 0,0,0 0 0,0,0 0 1.33617985037221 0 0 2.08897840978707 0 0 2.43928564798485 0 0 0 chimp,horse,human,macaque,marmoset,rabbit, lincRNA lincRNA A549@0.56815,AG04450@0.0411515,BJ@0.004408,GM12878@0,H1HESC@0.710983,HELAS3@0.007603,HEPG2@0.008638,HMEC@0,HSMM@0,HUVEC@0.18887,K562@0.125389,MCF7@0.324635,NHEK@0.104747,NHLF@0.016807,SKNSHRA@0, 0 0 0 0 ENSG00000235726.1 ENST00000413842.1 chr2:235790923-235797446 4 1648 4869 intergenic 2.98 0 0,0,1 0 0,0,0 0 0 0 0 9.86198398028342 0 0 11.143561306223 0 0 0 chimp,human,macaque,orangutan, lincRNA lincRNA A549@0.56815,AG04450@0.0411515,BJ@0.004408,GM12878@0,H1HESC@0.710983,HELAS3@0.007603,HEPG2@0.008638,HMEC@0,HSMM@0,HUVEC@0.18887,K562@0.125389,MCF7@0.324635,NHEK@0.104747,NHLF@0.016807,SKNSHRA@0, 0 0 0 0 ENSG00000235726.1 ENST00000434572.1 chr2:235796013-235797170 2 694 461 intergenic -4.58 0 0,0,0 0 0,0,0 0 0 0 8.52593659942363 0 0 8.66138328530259 0 0 1 1 chimp,human,macaque,marmoset,orangutan, lincRNA retained_intron A549@0.56815,AG04450@0.0411515,BJ@0.004408,GM12878@0,H1HESC@0.710983,HELAS3@0.007603,HEPG2@0.008638,HMEC@0,HSMM@0,HUVEC@0.18887,K562@0.125389,MCF7@0.324635,NHEK@0.104747,NHLF@0.016807,SKNSHRA@0, 0 0 0 0 ENSG00000226542.1 ENST00000444926.1 chr2:235993466-235997230 3 688 3072 intergenic -2.41 0 0,0,0 0 0,0,0 0 0 28.83 0 0 27.954 0 0 34.824 0 0 cat,dog,human,macaque,marmoset,panda, lincRNA lincRNA A549@0.017474,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000235293.1 ENST00000449362.1 chr2:236086540-236087549 2 661 346 intergenic 4.37 0 0,0,0 0 0,0,0 0 0 0 0 0 4.86 0 0 6.116 0 0 chimp,elephant,horse,human,macaque,marmoset,orangutan, lincRNA lincRNA A549@0.003274,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0.012414,HUVEC@0,K562@0,MCF7@0,NHEK@0.00385067,NHLF@0,SKNSHRA@0.006856, 0 0 0 0 ENSG00000235529.1 ENST00000440498.1 chr2:236414395-236416210 2 662 1151 intronic -0.77 1 0,1,1 0 0,0,0 26.7522658610272 0 5.98 20.6993957703927 0 19.508 20.8867069486405 0 19.644 0 0 chimp,dog,horse,human,macaque,marmoset,orangutan,panda,pig,rabbit, sense_intronic sense_intronic A549@0.489916,AG04450@0.281162,BJ@0.185476,GM12878@0,H1HESC@0.961276,HELAS3@0.872854,HEPG2@1.53124,HMEC@0.071812,HSMM@0.112631,HUVEC@0.549937,K562@0.630227,MCF7@3.97067,NHEK@0.374155,NHLF@0.0319225,SKNSHRA@0.224745, 0 0 0 0 ENSG00000232893.1 ENST00000413353.1 chr2:237299717-237301031 2 487 825 exonic 6.84 0 0,0,0 0 0,0,0 0 17.2848484848485 0 36.952772073922 31.3442424242424 0 44.2936344969199 54.7151515151515 0 0 0 chimp,cow,dog,elephant,guinea_pig,human,macaque,orangutan, antisense antisense A549@0.0914865,AG04450@0,BJ@0,GM12878@0,H1HESC@0.0283525,HELAS3@0.178446,HEPG2@0.0167345,HMEC@0,HSMM@0.215713,HUVEC@0.0218435,K562@0.0094965,MCF7@0.246022,NHEK@0.005221,NHLF@0.007936,SKNSHRA@0.0185915, 0 0 0 0 ENSG00000232328.1 ENST00000455068.1 chr2:237642025-237661449 3 558 18862 intergenic -0.80 0 0,0,0 0 0,0,0 0 2.7501855582653 0 0 5.38479482557523 0 0 10.0048775315449 0 0 0 chimp,human,macaque,marmoset,orangutan, lincRNA lincRNA A549@0.0049235,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0.004653,HSMM@0,HUVEC@0,K562@0,MCF7@0.016303,NHEK@0.00300033,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000232328.1 ENST00000413385.1 chr2:237661417-237663006 2 878 709 intergenic 0.72 0 0,0,1 0 0,0,0 71.1594533029613 0 0 36.8006833712984 0 0 36.8006833712984 0 0 0 0 cat,chimp,cow,dog,guinea_pig,horse,human,macaque,marmoset,orangutan,panda,pig,rat, lincRNA lincRNA A549@0.0049235,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0.004653,HSMM@0,HUVEC@0,K562@0,MCF7@0.016303,NHEK@0.00300033,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000124835.2 ENST00000244820.2 chr2:237957242-237964810 7 2224 5332 intergenic -1.14 1 0,0,0 0 0,0,0 0 0 0 0 2.94336084021005 1.62 0.633992805755396 2.99512378094524 1.632 0 0 chimp,human,macaque,marmoset,orangutan, antisense antisense A549@0.049483,AG04450@0.0493115,BJ@0.011604,GM12878@0.0251265,H1HESC@0.145491,HELAS3@0.136612,HEPG2@0.164479,HMEC@0,HSMM@0,HUVEC@0.149342,K562@0.0073085,MCF7@0.0397595,NHEK@0.0759777,NHLF@0.0008745,SKNSHRA@0.248725, 0 0 0 0 ENSG00000227252.1 ENST00000418430.1 chr2:237968077-237994460 2 2339 24042 exonic 2.40 0 0,1,1 1 0,0,0 0 3.04230097329673 43.88 2.44121419410004 2.14620247899509 61.082 3.03634031637452 2.05386407120872 62.604 0 0 chimp,human,macaque,orangutan, lincRNA processed_transcript A549@0.259558,AG04450@0.280211,BJ@0.292347,GM12878@0.385953,H1HESC@0.346757,HELAS3@0.50427,HEPG2@0.862973,HMEC@0.520592,HSMM@0.200826,HUVEC@0.33051,K562@0.204845,MCF7@0.294832,NHEK@0.294157,NHLF@0.184819,SKNSHRA@0.579687, 0 0 0 0 ENSG00000224844.1 ENST00000416509.1 chr2:238031553-238032740 2 667 518 intergenic -3.03 0 0,0,0 0 0,0,0 0 0 0 0 0 0 0 0 0 0 0 chimp,human,macaque,marmoset,orangutan, lincRNA lincRNA A549@0,AG04450@0.0067005,BJ@0.0213925,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000222032.1 ENST00000409910.1 chr2:238337563-238343465 3 538 5360 intergenic 1.29 0 0,0,0 0 0,1,0 30.7806691449814 0.257462686567164 0 30.0278810408922 1.26380597014925 0 31.7118959107807 2.07966417910448 0 1 1 chimp,human,macaque,marmoset,orangutan, lincRNA lincRNA A549@0.0114755,AG04450@0.155814,BJ@0.319781,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0.022706,HSMM@2.07252,HUVEC@0,K562@0.0185685,MCF7@0.066123,NHEK@0,NHLF@0,SKNSHRA@0.483855, 0 0 0 0 ENSG00000227107.1 ENST00000417947.1 chr2:238521620-238535168 2 2055 11491 intergenic 3.71 0 0,1,0 0 0,0,0 0 4.52206074319032 0 0 1.24236358889566 0 0 1.24862936210948 0 0 0 chimp,horse,human,macaque,marmoset,orangutan, lincRNA lincRNA A549@0,AG04450@0.002179,BJ@0,GM12878@0.047494,H1HESC@0.0125515,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0.004001,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0.0052305, 0 0 0 0 ENSG00000225057.2 ENST00000456601.1 chr2:239140325-239164274 7 2502 21435 exonic 17.69 1 0,1,0 0 0,0,0 0 13.7912759505482 0 15.9660271782574 62.8707721017028 0 254.694644284572 95.459248891999 0 0 0 human,macaque,orangutan, antisense antisense A549@0.0041675,AG04450@0.002771,BJ@0.0009815,GM12878@0.006278,H1HESC@0.015307,HELAS3@0.0095275,HEPG2@0.007657,HMEC@0,HSMM@0.0076125,HUVEC@0.00528,K562@0.025009,MCF7@0.01905,NHEK@0.001035,NHLF@0.0039345,SKNSHRA@0.0200635, 0 0 0 0 ENSG00000225057.2 ENST00000438457.1 chr2:239143097-239145847 2 1446 1302 intergenic 8.62 0 0,1,1 0 0,0,0 0 0 0 0 0 487.721 0 0 653.374 0 0 dog,horse,human,orangutan,panda,pig, antisense retained_intron A549@0.0041675,AG04450@0.002771,BJ@0.0009815,GM12878@0.006278,H1HESC@0.015307,HELAS3@0.0095275,HEPG2@0.007657,HMEC@0,HSMM@0.0076125,HUVEC@0.00528,K562@0.025009,MCF7@0.01905,NHEK@0.001035,NHLF@0.0039345,SKNSHRA@0.0200635, 0 0 0 0 ENSG00000232306.1 ENST00000437372.1 chr2:239207351-239209261 3 560 1346 intergenic 0.32 0 0,0,1 0 0,0,0 0 0 0 0 0 0 0 0 0 0 0 chimp,human,marmoset,orangutan, antisense antisense A549@0.775886,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0.059312,HEPG2@0.163533,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000229915.1 ENST00000447880.1 chr2:239335718-239336370 2 450 200 exonic 0 0 0,1,1 0 0,0,0 0 0 0 49.2355555555556 10.755 0 50.6533333333333 11.295 0 0 0 chimp,human,macaque,marmoset,mouse,orangutan,rat, antisense antisense A549@0,AG04450@0.0703235,BJ@0.327558,GM12878@0.026544,H1HESC@0,HELAS3@0.134157,HEPG2@0.036209,HMEC@0.126825,HSMM@0.206229,HUVEC@0.059257,K562@0.030822,MCF7@0.054018,NHEK@0.017512,NHLF@0.263939,SKNSHRA@0.052504, 0 0 0 0 ENSG00000225493.1 ENST00000446979.1 chr2:239419331-239463695 3 1972 42388 intergenic 8.08 0 0,1,0 0 0,0,0 0 3.22640841747664 0 0 2.78213173539681 0 8.41480730223124 76.2248277814476 0 0 0 chimp,human,macaque,marmoset,orangutan,panda, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0.150852,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0.0825015,NHEK@0,NHLF@0,SKNSHRA@0.002724, 0 0 0 0 ENSG00000234279.1 ENST00000448543.1 chr2:239628965-239649421 2 551 19903 intergenic 2.46 0 0,0,1 0 0,0,0 0 3.35190674772647 0 0 0.102497110988293 0 0 0.749183540169824 2.761 0 0 chimp,human,macaque,marmoset,orangutan, lincRNA lincRNA A549@0,AG04450@0,BJ@0.01294,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0.077383,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000226992.1 ENST00000441444.1 chr2:239697289-239698357 2 590 476 intergenic 3.35 0 0,1,0 0 0,0,0 5.67118644067797 43.1806722689076 63.428 8.10847457627119 4.85714285714286 105.403 9.30169491525424 20.6260504201681 133.13 0 0 chimp,cow,dog,horse,human,macaque,marmoset,orangutan,panda,pig, lincRNA lincRNA A549@0,AG04450@0,BJ@0.932387,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0.137426,SKNSHRA@0, 0 0 0 0 ENSG00000227744.3 ENST00000455228.1 chr2:239840998-239847965 10 3479 3470 intergenic 6.41 0 0,0,0 0 0,0,0 0 0 0 0 0 0 0 0 0 0 0 human,macaque,marmoset,orangutan, lincRNA lincRNA A549@0,AG04450@0,BJ@0.002802,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0.005875,HSMM@0,HUVEC@0,K562@0,MCF7@0.005285,NHEK@0.026556,NHLF@0.015099,SKNSHRA@0, 0 0 0 0 ENSG00000227744.3 ENST00000540922.1 chr2:239840998-239847965 9 3476 3475 intergenic 6.41 0 0,0,0 0 0,0,0 0 0 0 0 0 0 0 0 0 0 1 human,macaque,marmoset,orangutan, lincRNA lincRNA A549@0,AG04450@0,BJ@0.002802,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0.005875,HSMM@0,HUVEC@0,K562@0,MCF7@0.005285,NHEK@0.026556,NHLF@0.015099,SKNSHRA@0, 0 0 0 0 ENSG00000227459.1 ENST00000446029.1 chr2:240547392-240552533 2 346 4793 intergenic -5.70 0 0,1,0 0 0,0,0 0 0 0 0 1.09743375756311 0 0 1.16002503651158 0 0 0 chimp,elephant,horse,human,macaque,marmoset,mouse,orangutan,panda, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0.033589,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000227479.1 ENST00000457178.1 chr2:241166977-241195452 3 426 28045 intergenic 2.33 0 0,1,0 0 0,0,0 0 0.260830807630594 0 0 0.655197004813692 2.04 0 7.81861294348369 3.247 0 0 human,macaque,marmoset,orangutan, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0.0705215,HEPG2@0.604027,HMEC@0.019089,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0.0487563,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000233392.1 ENST00000418218.1 chr2:241894034-241906868 9 2265 10553 exonic 7.40 1 1,1,1 0 0,0,0 0 3.35639154742727 0 12.1487858719647 19.3110016109163 6.923 21.6291390728477 31.9756467355254 6.369 0 0 chimp,horse,human,macaque,orangutan, antisense antisense A549@0.0012145,AG04450@0.003837,BJ@0.0041075,GM12878@0,H1HESC@0.0247475,HELAS3@0.091195,HEPG2@0.842664,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0.114586,NHEK@0,NHLF@0.011226,SKNSHRA@0.0230615, 0 0 0 0 ENSG00000233392.1 ENST00000457369.1 chr2:241894441-241898771 5 795 3527 exonic 7.40 0 0,0,1 0 0,0,0 0 0 0 9.61509433962264 2.67252622625461 2.893 14.937106918239 10.4785937056989 10.483 0 0 chimp,human,macaque,marmoset,orangutan, antisense antisense A549@0.0012145,AG04450@0.003837,BJ@0.0041075,GM12878@0,H1HESC@0.0247475,HELAS3@0.091195,HEPG2@0.842664,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0.114586,NHEK@0,NHLF@0.011226,SKNSHRA@0.0230615, 0 0 0 0 ENSG00000233392.1 ENST00000438506.1 chr2:241898513-241899217 2 586 116 exonic 5.63 0 0,0,1 0 0,0,0 0 0 7.728 17.981228668942 0 6.097 33.0477815699659 0 27.462 0 0 horse,human,macaque,marmoset,orangutan,panda, antisense retained_intron A549@0.0012145,AG04450@0.003837,BJ@0.0041075,GM12878@0,H1HESC@0.0247475,HELAS3@0.091195,HEPG2@0.842664,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0.114586,NHEK@0,NHLF@0.011226,SKNSHRA@0.0230615, 0 0 0 0 ENSG00000223991.1 ENST00000425110.1 chr2:241920932-241925489 2 2343 2212 exonic 21.38 0 0,0,0 0 0,0,0 0 0 0 1.95902688860435 0 0 12.6606914212548 0 0 0 0 chimp,human,marmoset,orangutan,panda, antisense antisense A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0.005069,HELAS3@0.0203715,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000229996.1 ENST00000425183.1 chr2:241949462-241950161 2 426 271 intronic -0.53 1 0,1,0 0 0,0,0 17.6619718309859 0 0 29.7840375586854 0 0 30.5164319248826 0 44.209 0 0 cat,chimp,cow,dog,guinea_pig,horse,human,macaque,marmoset,orangutan,panda, antisense antisense A549@0,AG04450@0,BJ@0.0057525,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0.010652,HUVEC@0.0139065,K562@0,MCF7@0.139068,NHEK@0,NHLF@0,SKNSHRA@0.018295, 0 0 0 0 ENSG00000225521.1 ENST00000458377.1 chr2:241955016-242003533 3 556 47957 exonic -0.40 0 0,1,1 0 0,0,0 19.8129496402878 8.06597576996059 43.278 34.9640287769784 17.1929228266989 70.361 34.5107913669065 20.3378860228955 76.532 0 0 chimp,human,macaque,marmoset,orangutan, antisense antisense A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0.06067,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0.739779,NHEK@0.0141707,NHLF@0,SKNSHRA@0.016263, 0 0 0 0 ENSG00000223374.1 ENST00000414896.1 chr2:242290755-242292519 2 440 1322 exonic 0.41 0 0,1,0 0 0,0,0 0 17.0998487140696 31.24 0 17.9508320726172 43.172 0 30.7700453857791 36.481 0 0 chimp,human,macaque,marmoset,orangutan, antisense antisense A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0.0093865,HELAS3@0.0600445,HEPG2@0.021983,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000234235.1 ENST00000434306.1 chr2:242483818-242498392 2 641 13931 exonic -6.68 0 1,1,1 0 0,0,0 32.9641185647426 1.01471538295887 60.716 33.7800312012481 3.81243270404135 125.432 24.7379095163807 3.97458904601249 147.798 0 0 human, antisense antisense A549@0.0101275,AG04450@0.0179595,BJ@0.120859,GM12878@0,H1HESC@0.070008,HELAS3@0.0690435,HEPG2@0.602104,HMEC@0.006368,HSMM@0.22329,HUVEC@0.109541,K562@0.015279,MCF7@0.101261,NHEK@0.024249,NHLF@0.069288,SKNSHRA@0.0070695, 0 0 0 0 ENSG00000228989.1 ENST00000433036.1 chr2:242629829-242633704 2 413 3460 intergenic 4.51 0 0,1,0 0 0,0,0 0 0 0 0 1.10520231213873 0 0 1.12369942196532 0 0 0 chimp,human,macaque,marmoset,orangutan, antisense antisense A549@6.12929,AG04450@5.29589,BJ@8.47233,GM12878@7.13838,H1HESC@8.30576,HELAS3@13.8283,HEPG2@28.3736,HMEC@7.49521,HSMM@0.894332,HUVEC@6.9842,K562@6.73563,MCF7@12.3334,NHEK@5.21358,NHLF@3.38719,SKNSHRA@9.28485, 0 0 0 0 ENSG00000235351.1 ENST00000435195.1 chr2:242664030-242665108 2 582 494 exonic 9.16 0 0,1,0 0 0,0,0 21.6374570446735 0 0 32.1288659793814 0 6.945 50.7886597938144 0 22.462 0 0 cat,chimp,dog,horse,human,macaque,marmoset,orangutan,panda, antisense antisense A549@0.0094595,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0.003885, 0 0 0 0 ENSG00000215692.2 ENST00000400768.2 chr2:242674130-242674913 2 470 311 exonic 7.10 0 1,1,1 0 0,0,0 0 0 0 37.236170212766 0 0.289 70.2425531914894 0 3.3 0 0 cat,chimp,cow,dog,elephant,guinea_pig,horse,human,macaque,marmoset,mouse,orangutan,panda,platypus,rabbit, antisense antisense A549@0.016303,AG04450@0.033963,BJ@0.0724905,GM12878@0,H1HESC@0,HELAS3@0.014526,HEPG2@0.117055,HMEC@0.0694,HSMM@0.037696,HUVEC@0.01261,K562@0,MCF7@0.050741,NHEK@0.0362197,NHLF@0,SKNSHRA@0.139533, 0 0 0 0 ENSG00000234793.1 ENST00000417267.1 chr2:242694208-242695155 2 666 279 exonic 1.88 0 0,1,0 0 0,0,0 0 0 0 0 0 55.556 0 0 63.799 0 0 chimp,human,macaque,marmoset,orangutan, antisense antisense A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0.0030095,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000215023.2 ENST00000437438.1 chr2:242740331-242741322 2 737 252 exonic 13.18 1 0,0,0 0 0,0,0 0 0 0 39.0420624151967 0 31.406 41.6635006784261 0 34.795 0 0 chimp,human,marmoset,orangutan, antisense antisense A549@0,AG04450@0.0043635,BJ@0,GM12878@0,H1HESC@0.0106835,HELAS3@0.03389,HEPG2@0.032198,HMEC@0,HSMM@0,HUVEC@0,K562@0.235378,MCF7@0.0110055,NHEK@0,NHLF@0,SKNSHRA@0.0368955, 0 0 0 0 ENSG00000224272.2 ENST00000413820.1 chr2:242749407-242751732 2 1226 1097 exonic 3.08 1 0,0,1 0 0,0,0 0 0 0 0 0 0 2.16150081566068 4.20875113947129 10.312 0 0 chimp,human, antisense antisense A549@0.0017675,AG04450@0,BJ@0,GM12878@0.003852,H1HESC@0,HELAS3@0.132827,HEPG2@1.56943,HMEC@0,HSMM@0.0125445,HUVEC@0,K562@0.0095235,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0.04047, 0 0 0 0 ENSG00000224272.2 ENST00000439270.1 chr2:242750205-242751718 3 328 1181 exonic 0 0 0,0,1 0 0,0,0 0 0 0 0 0 0 0 6.1532599491956 10.312 0 0 chimp,cow,human,macaque,marmoset,orangutan, antisense antisense A549@0.0017675,AG04450@0,BJ@0,GM12878@0.003852,H1HESC@0,HELAS3@0.132827,HEPG2@1.56943,HMEC@0,HSMM@0.0125445,HUVEC@0,K562@0.0095235,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0.04047, 0 0 0 0 ENSG00000224272.2 ENST00000420272.2 chr2:242750793-242753111 3 1190 1124 exonic 3.41 0 0,0,0 0 0,0,0 0 0 0 0 0 7.96 8.25042016806723 6.90480427046263 87.559 0 0 horse,human,macaque,marmoset,orangutan,rabbit, antisense antisense A549@0.0017675,AG04450@0,BJ@0,GM12878@0.003852,H1HESC@0,HELAS3@0.132827,HEPG2@1.56943,HMEC@0,HSMM@0.0125445,HUVEC@0,K562@0.0095235,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0.04047, 0 0 0 0 ENSG00000235151.1 ENST00000442867.1 chr2:242786532-242787188 2 569 85 intergenic 0 0 0,1,0 1 0,0,0 0 0 0 4.92970123022847 0 0 5.12302284710018 0 3.159 0 0 chimp,human,macaque,marmoset,orangutan, antisense antisense A549@0.0190075,AG04450@0,BJ@0,GM12878@0.171279,H1HESC@0.074623,HELAS3@0,HEPG2@0.0410485,HMEC@0,HSMM@0.104491,HUVEC@0.031715,K562@1.72618,MCF7@0.180756,NHEK@0,NHLF@0.03399,SKNSHRA@0.219806, 0 0 0 0 ENSG00000233806.2 ENST00000430555.1 chr2:242823514-242908591 4 839 84232 encompassing 7.31 0 0,1,1 1 0,0,0 0 0 0 0 0.0662218634248267 0 0 25.0448404406876 0 0 0 chimp,human,macaque,marmoset,orangutan, processed_transcript processed_transcript A549@0.120459,AG04450@0.270797,BJ@0.241634,GM12878@1.14292,H1HESC@0.98053,HELAS3@0,HEPG2@0.023181,HMEC@0.057845,HSMM@0.286081,HUVEC@0.561195,K562@0.563352,MCF7@0.509487,NHEK@0.0386957,NHLF@0.018639,SKNSHRA@2.02907, 0 0 0 0 ENSG00000233806.2 ENST00000415434.1 chr2:242823517-243020873 4 569 196781 encompassing 0.25 0 0,1,0 1 0,0,0 0 0 0 0 0.10429360558184 0 0 19.2499479116378 0 0 0 chimp,human,marmoset, processed_transcript processed_transcript A549@0.120459,AG04450@0.270797,BJ@0.241634,GM12878@1.14292,H1HESC@0.98053,HELAS3@0,HEPG2@0.023181,HMEC@0.057845,HSMM@0.286081,HUVEC@0.561195,K562@0.563352,MCF7@0.509487,NHEK@0.0386957,NHLF@0.018639,SKNSHRA@2.02907, 0 0 0 0 ENSG00000233806.2 ENST00000457686.1 chr2:242823518-242908479 3 583 84374 encompassing 7.31 0 0,1,0 1 0,0,0 0 0 0 0 0.0661104131604523 0 0 25.0026904022566 0 0 0 human,macaque,marmoset,orangutan, processed_transcript processed_transcript A549@0.120459,AG04450@0.270797,BJ@0.241634,GM12878@1.14292,H1HESC@0.98053,HELAS3@0,HEPG2@0.023181,HMEC@0.057845,HSMM@0.286081,HUVEC@0.561195,K562@0.563352,MCF7@0.509487,NHEK@0.0386957,NHLF@0.018639,SKNSHRA@2.02907, 0 0 0 0 ENSG00000233806.2 ENST00000429947.1 chr2:242824099-242901084 4 466 76513 encompassing 0 0 0,1,0 1 0,0,0 0 0 0 0 0.0729026439951381 0 0 27.571484584319 0 0 0 chimp,human,macaque,marmoset,orangutan, processed_transcript processed_transcript A549@0.120459,AG04450@0.270797,BJ@0.241634,GM12878@1.14292,H1HESC@0.98053,HELAS3@0,HEPG2@0.023181,HMEC@0.057845,HSMM@0.286081,HUVEC@0.561195,K562@0.563352,MCF7@0.509487,NHEK@0.0386957,NHLF@0.018639,SKNSHRA@2.02907, 0 0 0 0 ENSG00000233806.2 ENST00000439601.1 chr2:242875987-242908271 2 567 31715 intergenic 0.25 0 0,0,0 0 0,0,0 0 0 0 0 0 0 0 32.7345104839981 0 0 0 human, processed_transcript retained_intron A549@0.120459,AG04450@0.270797,BJ@0.241634,GM12878@1.14292,H1HESC@0.98053,HELAS3@0,HEPG2@0.023181,HMEC@0.057845,HSMM@0.286081,HUVEC@0.561195,K562@0.563352,MCF7@0.509487,NHEK@0.0386957,NHLF@0.018639,SKNSHRA@2.02907, 0 0 0 0 ENSG00000237940.2 ENST00000429456.1 chr2:242912834-242919427 6 2164 4419 intergenic 7.35 0 0,1,0 0 0,0,0 0 0 0 0 0 0 0 0 109.955 0 0 human,macaque,orangutan, lincRNA lincRNA A549@0.113782,AG04450@0.305483,BJ@0.190726,GM12878@0.816503,H1HESC@0.903531,HELAS3@0.0107485,HEPG2@0.038545,HMEC@0.007447,HSMM@0.173144,HUVEC@0.184816,K562@0.381067,MCF7@1.07994,NHEK@0.048714,NHLF@0.105993,SKNSHRA@1.28885, 0 0 0 0 ENSG00000233806.2 ENST00000416204.1 chr2:242913151-242914050 3 587 308 intergenic 5.60 0 1,1,1 0 0,0,0 0 0 0 0 0 0 0 0 14.045 0 0 human,macaque,orangutan, processed_transcript processed_transcript A549@0.120459,AG04450@0.270797,BJ@0.241634,GM12878@1.14292,H1HESC@0.98053,HELAS3@0,HEPG2@0.023181,HMEC@0.057845,HSMM@0.286081,HUVEC@0.561195,K562@0.563352,MCF7@0.509487,NHEK@0.0386957,NHLF@0.018639,SKNSHRA@2.02907, 0 0 0 0 ENSG00000237940.2 ENST00000426962.1 chr2:242913429-242914075 2 428 216 intergenic 5.60 0 0,1,1 0 0,0,0 0 0 0 0 0 0 0 0 14.045 0 1 human,macaque,orangutan, lincRNA retained_intron A549@0.113782,AG04450@0.305483,BJ@0.190726,GM12878@0.816503,H1HESC@0.903531,HELAS3@0.0107485,HEPG2@0.038545,HMEC@0.007447,HSMM@0.173144,HUVEC@0.184816,K562@0.381067,MCF7@1.07994,NHEK@0.048714,NHLF@0.105993,SKNSHRA@1.28885, 0 0 0 0 ENSG00000237940.2 ENST00000451070.1 chr2:242914189-242916680 2 597 1892 intergenic 2.14 0 0,0,1 0 0,0,0 0 0 0 0 0 0 0 0 0 0 1 human,macaque, lincRNA retained_intron A549@0.113782,AG04450@0.305483,BJ@0.190726,GM12878@0.816503,H1HESC@0.903531,HELAS3@0.0107485,HEPG2@0.038545,HMEC@0.007447,HSMM@0.173144,HUVEC@0.184816,K562@0.381067,MCF7@1.07994,NHEK@0.048714,NHLF@0.105993,SKNSHRA@1.28885, 0 0 0 0 ENSG00000226423.1 ENST00000412193.1 chr2:242967334-242968327 2 563 428 intergenic 1.90 0 0,0,0 0 0,0,0 0 0 0 0 0 0 0 0 0 0 0 chimp,human,macaque,marmoset,orangutan, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 154 2 0 0 ENSG00000232002.1 ENST00000446593.1 chr2:242989846-243026289 4 557 35880 intergenic -1.81 0 0,0,0 0 0,0,0 0 0 0 0 0 0 14.7666068222621 0.973885172798216 87.483 0 0 human,macaque,orangutan, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0.0040275,HEPG2@0,HMEC@0,HSMM@0.0466845,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000225377.1 ENST00000414676.1 chr20:300957-305878 3 747 4170 intergenic -5.56 0 1,1,1 1 0,0,0 0 20.3395683453237 541.94 7.30388219544846 8.16282973621103 672.27 9.96251673360107 10.7203836930456 448.37 0 0 chimp,human,macaque,orangutan, antisense antisense A549@4.34701,AG04450@1.69972,BJ@1.90586,GM12878@4.31061,H1HESC@1.66065,HELAS3@2.25663,HEPG2@4.40808,HMEC@0.786432,HSMM@0.950384,HUVEC@0.739392,K562@4.67629,MCF7@1.04319,NHEK@1.03811,NHLF@1.64666,SKNSHRA@2.65772, 0 0 0 0 ENSG00000225377.1 ENST00000442637.1 chr20:300977-328868 3 759 27128 intronic -5.56 0 1,1,1 1 0,0,0 0 53.9369654969036 0 0 70.8401282807431 0 0 54.7554924800944 0 0 0 chimp,human,macaque,orangutan, antisense antisense A549@4.34701,AG04450@1.69972,BJ@1.90586,GM12878@4.31061,H1HESC@1.66065,HELAS3@2.25663,HEPG2@4.40808,HMEC@0.786432,HSMM@0.950384,HUVEC@0.739392,K562@4.67629,MCF7@1.04319,NHEK@1.03811,NHLF@1.64666,SKNSHRA@2.65772, 0 0 0 0 ENSG00000246892.2 ENST00000500146.2 chr20:306269-309372 2 1781 1320 exonic -1.59 0 1,1,1 0 0,0,0 231.404828747894 516.665909090909 18.468 274.08141493543 776.55 22.196 201.043234138125 571.040151515152 21.831 0 0 cat,chimp,dog,horse,human,macaque,marmoset,mouse,orangutan,panda,rat, lincRNA lincRNA A549@0.062779,AG04450@0.0409225,BJ@0.0263745,GM12878@0.11773,H1HESC@0.0064565,HELAS3@0.081036,HEPG2@0.0723715,HMEC@0.003114,HSMM@0.018421,HUVEC@0.0304575,K562@0.01751,MCF7@0.028057,NHEK@0.0395333,NHLF@0.0737575,SKNSHRA@0.0725665, 0 0 0 0 ENSG00000234684.1 ENST00000446423.1 chr20:1306065-1358827 4 1807 50949 intronic 5.82 0 0,1,1 1 0,0,0 0 13.1429861233783 0 0.939679026009961 15.6981098745805 3.419 2.2628666297731 17.4375159473199 3.536 0 0 chimp,human,macaque,marmoset,orangutan, lincRNA processed_transcript A549@0.547407,AG04450@0.466924,BJ@0.279332,GM12878@0.609828,H1HESC@0.025313,HELAS3@0.549013,HEPG2@1.1052,HMEC@0.11531,HSMM@0.225596,HUVEC@0.043043,K562@0.208256,MCF7@0.284081,NHEK@0.126033,NHLF@0.267154,SKNSHRA@0.712597, 0 0 0 0 ENSG00000229728.1 ENST00000412497.1 chr20:1342266-1343229 2 478 483 intergenic -1.59 0 0,0,1 0 0,0,0 0 0 27.295 0 7.91925465838509 22.728 12.7092050209205 8.77846790890269 29.57 0 0 NA antisense antisense A549@0.256769,AG04450@0.151451,BJ@0.0397025,GM12878@0.215502,H1HESC@0.129495,HELAS3@0.325603,HEPG2@0.434984,HMEC@0.135838,HSMM@0.0196485,HUVEC@0.037287,K562@0.291079,MCF7@0.0229975,NHEK@0.0488353,NHLF@0.03391,SKNSHRA@0.176587, 0 0 0 0 ENSG00000237914.1 ENST00000456177.1 chr20:1614154-1629118 3 2792 12168 intronic 1.87 0 0,0,0 0 0,0,0 0 0 0 0 3.88560157790927 0 0 5.33653846153846 0 0 0 chimp,human,macaque,orangutan, lincRNA processed_transcript A549@0,AG04450@0.0011535,BJ@0,GM12878@0.0030425,H1HESC@0.0008855,HELAS3@0,HEPG2@0.000976,HMEC@0.001465,HSMM@0,HUVEC@0,K562@0,MCF7@0.0007355,NHEK@0,NHLF@0.088809,SKNSHRA@0.0082445, 0 0 0 0 ENSG00000237914.1 ENST00000437384.1 chr20:1614272-1619100 4 406 4416 intronic -3.22 0 0,0,0 0 0,0,0 0 0 0 0 10.7065217391304 0 0 14.7044836956522 0 0 0 chimp,human,macaque,marmoset,orangutan, lincRNA processed_transcript A549@0,AG04450@0.0011535,BJ@0,GM12878@0.0030425,H1HESC@0.0008855,HELAS3@0,HEPG2@0.000976,HMEC@0.001465,HSMM@0,HUVEC@0,K562@0,MCF7@0.0007355,NHEK@0,NHLF@0.088809,SKNSHRA@0.0082445, 0 0 0 0 ENSG00000240333.1 ENST00000458670.1 chr20:1754011-1760392 4 743 5632 intergenic 4.64 0 0,0,0 0 0,0,0 0 1.1875 0 38.0040376850606 0.835227272727273 15.538 49.4495289367429 1.35298295454545 16.149 0 0 chimp,cow,elephant,guinea_pig,horse,human,macaque,marmoset,orangutan,pig,rabbit, processed_transcript processed_transcript A549@0.0120215,AG04450@0.079607,BJ@0.0514525,GM12878@0.005672,H1HESC@0.0257735,HELAS3@0.0359365,HEPG2@0.0465205,HMEC@0,HSMM@0.222631,HUVEC@0.0115775,K562@0.0031085,MCF7@0,NHEK@0.115494,NHLF@0.0031905,SKNSHRA@0.0283455, 0 0 0 0 ENSG00000230839.1 ENST00000447206.1 chr20:1784662-1798252 4 342 13242 intergenic -1.28 0 0,1,0 0 0,0,0 0 32.5140462165836 14.101 0 36.1512611388008 0 0 36.4057544177617 0 0 0 chimp,human,macaque,marmoset,orangutan, lincRNA lincRNA A549@0.0727405,AG04450@0.078775,BJ@0.1106,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0.041697,HMEC@0.153844,HSMM@0.757745,HUVEC@0.043006,K562@0,MCF7@0,NHEK@0.326916,NHLF@0.016793,SKNSHRA@0.097409, 0 0 0 0 ENSG00000233896.1 ENST00000446562.1 chr20:1927892-1988163 4 1798 58467 encompassing 9.21 0 0,0,0 0 0,0,0 86.59510567297 24.2026100193271 0 132.802002224694 22.6625275796603 0 123.179644048943 23.8039919954846 0 0 0 chimp,cow,dog,horse,human,macaque,marmoset,orangutan,panda,pig,rabbit, lincRNA processed_transcript A549@0,AG04450@0,BJ@0.002686,GM12878@0.0064915,H1HESC@0.079152,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000226644.1 ENST00000447956.1 chr20:2187863-2193797 2 413 5519 intergenic 6.46 1 1,1,1 0 0,0,0 0 4.02246783837652 0 4.80387409200969 4.94908497916289 42.975 5.01694915254237 5.82986048197137 59.398 0 0 chimp,cow,horse,human,macaque,marmoset,orangutan,rabbit, lincRNA lincRNA A549@0.129105,AG04450@0.0041815,BJ@0.0091865,GM12878@0.130616,H1HESC@0.157442,HELAS3@0,HEPG2@0,HMEC@0.038813,HSMM@0.0157695,HUVEC@0,K562@0,MCF7@0.110477,NHEK@0.030918,NHLF@0,SKNSHRA@0.046606, 0 0 0 0 ENSG00000226644.1 ENST00000411839.1 chr20:2187873-2193797 2 534 5388 intergenic 12.51 1 1,1,1 0 0,0,0 0 4.12026726057906 0 3.71535580524345 5.06941351150705 42.975 3.88014981273408 5.97160356347439 59.398 0 0 chimp,cow,dog,horse,human,macaque,marmoset,orangutan,rabbit, lincRNA lincRNA A549@0.129105,AG04450@0.0041815,BJ@0.0091865,GM12878@0.130616,H1HESC@0.157442,HELAS3@0,HEPG2@0,HMEC@0.038813,HSMM@0.0157695,HUVEC@0,K562@0,MCF7@0.110477,NHEK@0.030918,NHLF@0,SKNSHRA@0.046606, 0 0 0 0 ENSG00000228293.1 ENST00000418739.1 chr20:2644998-2646520 2 870 650 intergenic -3.26 0 0,0,0 0 0,0,0 0 0 120.495 0 0 140.351 0 0 145.501 0 0 chimp,human,marmoset,orangutan, antisense antisense A549@0.071906,AG04450@0.019381,BJ@0.041007,GM12878@0.248802,H1HESC@0.086725,HELAS3@0.0636765,HEPG2@0.080976,HMEC@0,HSMM@0.0305785,HUVEC@0.0108045,K562@0.132217,MCF7@0.0268045,NHEK@0.00151067,NHLF@0.0111135,SKNSHRA@0.0491295, 0 0 0 0 ENSG00000235958.1 ENST00000446537.1 chr20:3087559-3131513 7 1785 42157 exonic 5.02 0 0,1,1 0 0,0,0 6.4 28.3013259956828 0 33.4179271708684 41.2726949261095 18.471 34.9641456582633 38.101169438053 18.333 0 0 chimp,dog,guinea_pig,human,macaque,marmoset,orangutan,rabbit, lincRNA processed_transcript A549@0,AG04450@0,BJ@0,GM12878@0.001632,H1HESC@0,HELAS3@0.0023295,HEPG2@0.001214,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0.025315, 0 0 0 0 ENSG00000235958.1 ENST00000454019.1 chr20:3091283-3097369 3 422 5660 intronic -0.01 1 0,1,0 0 0,0,0 33.4976303317536 14.7183745583039 30 0 13.066961130742 95.662 0 10.9971731448763 90.821 0 0 chimp,human,macaque,marmoset,orangutan,rabbit, lincRNA processed_transcript A549@0,AG04450@0,BJ@0,GM12878@0.001632,H1HESC@0,HELAS3@0.0023295,HEPG2@0.001214,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0.025315, 0 0 0 0 ENSG00000229539.1 ENST00000451507.1 chr20:3868886-3869515 2 439 188 exonic -2.11 1 0,0,1 0 0,0,0 54.7061503416856 57.4893617021277 94.26 56.2596810933941 55.7021276595745 168.256 55.5854214123007 55.7021276595745 175.737 0 0 chimp,human,macaque,marmoset,orangutan, antisense antisense A549@1.21081,AG04450@0.413287,BJ@0.48127,GM12878@0.867357,H1HESC@0.485535,HELAS3@1.0213,HEPG2@1.50813,HMEC@1.4335,HSMM@0.28527,HUVEC@0.534585,K562@0.562243,MCF7@0.60556,NHEK@0.268666,NHLF@0.281151,SKNSHRA@1.19358, 0 0 0 0 ENSG00000230176.1 ENST00000419003.1 chr20:4173714-4176375 3 477 2180 intergenic 2.33 0 0,0,1 0 0,0,0 0 0 0 0 0 0 0 0 0 0 0 cat,chimp,cow,dog,elephant,horse,human,macaque,marmoset,orangutan,panda,pig, antisense antisense A549@2.98246,AG04450@0.076982,BJ@0.0914515,GM12878@0,H1HESC@0.091075,HELAS3@3.46576,HEPG2@0.990422,HMEC@0.025591,HSMM@0.0085735,HUVEC@0.113812,K562@0.042499,MCF7@0.0041885,NHEK@0.035494,NHLF@0.004065,SKNSHRA@0.1749, 0 0 0 0 ENSG00000236387.1 ENST00000448825.1 chr20:4411808-4412320 2 406 104 intergenic -5.20 0 0,0,0 0 0,0,0 0 0 0 0 0 0 0 0 0 0 0 chimp,horse,human,macaque,marmoset,orangutan, lincRNA lincRNA A549@0,AG04450@0,BJ@0.0277255,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000238282.1 ENST00000419863.1 chr20:4456285-4505846 2 166 49393 intergenic 0 0 0,0,0 0 0,0,0 0 7.93604356892677 0 0 8.0782702002308 0 0 8.6947543174134 0 0 0 chimp,horse,human,macaque,orangutan, lincRNA lincRNA A549@0.016441,AG04450@0,BJ@0.0144045,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0.024373,HSMM@0.013569,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0.011614,SKNSHRA@0, 0 0 0 0 ENSG00000226995.1 ENST00000414677.1 chr20:5412638-5413249 2 440 169 intergenic -1.95 1 0,0,0 0 0,0,0 0 0 25.52 0 0 15.349 0 0 14.387 0 0 chimp,human,macaque,marmoset,orangutan, lincRNA lincRNA A549@0.0014075,AG04450@0,BJ@0,GM12878@0.010009,H1HESC@0.0013455,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000226995.1 ENST00000420529.1 chr20:5412638-5426332 5 1537 12149 intergenic 0.82 1 0,0,0 0 0,0,0 10.4879635653871 8.9516009548111 0 0 6.84747715861388 8.548 0 8.11762284961725 9.24 0 0 chimp,horse,human,macaque,orangutan, lincRNA lincRNA A549@0.0014075,AG04450@0,BJ@0,GM12878@0.010009,H1HESC@0.0013455,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000226995.1 ENST00000422352.1 chr20:5414519-5426392 3 672 11197 intergenic 1.69 0 0,0,0 0 0,0,0 23.9880952380952 7.11913905510405 0 0 5.79530231311958 8.548 0 7.18960435831026 9.24 0 0 chimp,cow,horse,human,macaque,orangutan, lincRNA lincRNA A549@0.0014075,AG04450@0,BJ@0,GM12878@0.010009,H1HESC@0.0013455,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000205181.2 ENST00000379053.2 chr20:5480969-5485259 2 1855 2433 intergenic 5.67 1 1,1,1 1 0,0,0 0 0 0 0 0 0 0 0 0 0 0 cat,chimp,elephant,horse,human,macaque,marmoset,orangutan, lincRNA processed_transcript A549@0.0625175,AG04450@1.26488,BJ@2.72466,GM12878@0.081803,H1HESC@0.022318,HELAS3@0.231519,HEPG2@0.682816,HMEC@0.006615,HSMM@0.542933,HUVEC@0.511939,K562@0.109329,MCF7@0.001107,NHEK@0.017264,NHLF@1.65935,SKNSHRA@3.02141, 0 0 0 0 ENSG00000205181.2 ENST00000430333.1 chr20:5482168-5483436 2 468 798 intergenic 5.67 1 0,0,1 0 0,0,0 0 0 0 0 0 0 0 0 0 0 0 chimp,human,macaque,marmoset,orangutan,panda, lincRNA processed_transcript A549@0.0625175,AG04450@1.26488,BJ@2.72466,GM12878@0.081803,H1HESC@0.022318,HELAS3@0.231519,HEPG2@0.682816,HMEC@0.006615,HSMM@0.542933,HUVEC@0.511939,K562@0.109329,MCF7@0.001107,NHEK@0.017264,NHLF@1.65935,SKNSHRA@3.02141, 0 0 0 0 ENSG00000225640.1 ENST00000450640.1 chr20:5488521-5490648 3 355 1768 intergenic -0.33 1 0,0,0 0 0,0,0 0 0 0 0 0 0 0 0 0 0 0 chimp,human,macaque,marmoset,orangutan,panda, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0.0147165,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0.00644,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000235820.1 ENST00000413249.1 chr20:5514274-5516535 3 470 1787 intergenic -23.48 1 0,0,0 0 0,0,0 0 0 0 0 0 13.77 0 3.39955232232792 363.832 0 0 chimp,human,macaque,marmoset,orangutan, antisense antisense A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000247862.1 ENST00000500193.1 chr20:5971589-5986467 5 978 13892 intronic -1.47 0 0,1,0 0 0,0,0 0 12.1957241577887 12.76 8.20143149284254 13.9362222862079 57.167 8.30470347648262 16.4924416930608 48.721 0 0 chimp,horse,human,macaque,marmoset,orangutan, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0.008925,H1HESC@0.0050345,HELAS3@0.0080995,HEPG2@0.0029805,HMEC@0,HSMM@0,HUVEC@0,K562@0.01644,MCF7@0,NHEK@0.00519433,NHLF@0.001985,SKNSHRA@0.010945, 0 0 0 0 ENSG00000229876.1 ENST00000415932.1 chr20:6427370-6509106 3 1481 80251 intergenic -0.09 0 0,0,1 0 0,0,0 0 30.6095126540479 0 0 26.8392668004137 5.1 7.7846049966239 26.5638309802993 7.001 0 0 cat,chimp,cow,dog,elephant,guinea_pig,horse,human,macaque,marmoset,orangutan,pig,rabbit, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0.0020025,HELAS3@0,HEPG2@0.0068805,HMEC@0,HSMM@0,HUVEC@0,K562@0.0226905,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000228482.1 ENST00000445589.1 chr20:6711905-6716783 3 929 3945 intergenic -1.28 0 0,1,0 0 0,0,0 50.0635091496233 61.5716096324461 340.351 13.3207750269107 36.5275031685678 344.852 18.4908503767492 29.6557667934094 328.997 0 0 chimp,horse,human,macaque,marmoset,orangutan, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000232271.1 ENST00000425900.1 chr20:7050261-7127303 2 379 76661 intergenic -1.63 0 0,0,1 0 0,0,0 0 7.3785758077771 0 0 10.9547749181461 0 0 14.255136249201 0 0 0 cat,chimp,cow,dog,elephant,horse,human,macaque,marmoset,orangutan,panda,pig, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@33.7013,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0.010801,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000228888.1 ENST00000449581.1 chr20:7127114-7234849 8 866 106855 intergenic -0.19 0 0,0,0 0 0,0,0 66.8013856812933 17.8067006691311 140.16 82.2251732101617 23.2347105891161 90.205 87.3360277136259 25.3808525572037 97.165 0 0 chimp,cow,dog,horse,human,macaque,marmoset,opossum,orangutan,panda,rabbit, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0.015716,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000238102.1 ENST00000428954.1 chr20:7237227-7238861 2 386 1246 intergenic 0 1 0,0,0 0 0,0,0 53.6787564766839 313.436597110754 25.36 82.0362694300518 247.885232744783 6.816 78.8911917098446 205.232744783307 6.8 0 0 chimp,cow,dog,elephant,guinea_pig,horse,human,macaque,marmoset,orangutan,panda,pig,rabbit, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000224711.1 ENST00000455299.1 chr20:7328114-7348279 3 745 19416 intergenic -3.04 0 0,1,0 0 0,0,0 0 52.2626699629172 0 44.3838926174497 49.5184899052328 10.662 50.7194630872483 52.6464771322621 19.525 0 0 cat,chimp,cow,dog,elephant,horse,human,macaque,marmoset,orangutan,panda,pig,rabbit, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0.323738,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000229766.1 ENST00000457707.1 chr20:8000549-8008603 7 1922 6120 intergenic -1.29 0 0,0,0 0 0,0,0 2.28928199791883 9.26470588235294 41.653 0 11.6485294117647 53.494 0.885015608740895 13.7977124183007 58.367 0 0 chimp,human,marmoset,orangutan, lincRNA processed_transcript A549@0.0123035,AG04450@0.0039955,BJ@0.0025525,GM12878@0.062598,H1HESC@0.0015085,HELAS3@0.0143165,HEPG2@0.002256,HMEC@0,HSMM@0,HUVEC@0,K562@0.025737,MCF7@0.029537,NHEK@0,NHLF@0,SKNSHRA@0.0082375, 0 0 0 0 ENSG00000225479.1 ENST00000441231.1 chr20:8229351-8230389 2 371 665 intronic -5.58 1 0,1,0 0 0,0,0 27.0161725067385 5.41052631578947 0 10.188679245283 2.37293233082707 0 9.74123989218329 5.28421052631579 0 0 0 cat,chimp,cow,dog,elephant,guinea_pig,horse,human,macaque,marmoset,mouse,orangutan,panda,rabbit,rat, sense_intronic sense_intronic A549@0,AG04450@0.0549115,BJ@0.100977,GM12878@0.0320605,H1HESC@0.008483,HELAS3@0.617105,HEPG2@0.906121,HMEC@0,HSMM@0,HUVEC@0.169683,K562@0.040486,MCF7@0.0857335,NHEK@0,NHLF@0,SKNSHRA@0.784288, 0 0 0 0 ENSG00000225479.1 ENST00000451443.1 chr20:8229372-8237564 2 249 7941 intronic -1.02 0 0,1,0 0 0,0,0 137.25702811245 17.8543004659363 0 78.429718875502 23.7754690844982 0 84.8192771084337 25.5897242160937 0 0 0 cat,chimp,cow,dog,elephant,guinea_pig,horse,human,macaque,marmoset,orangutan,panda,pig,rabbit,rat, sense_intronic sense_intronic A549@0,AG04450@0.0549115,BJ@0.100977,GM12878@0.0320605,H1HESC@0.008483,HELAS3@0.617105,HEPG2@0.906121,HMEC@0,HSMM@0,HUVEC@0.169683,K562@0.040486,MCF7@0.0857335,NHEK@0,NHLF@0,SKNSHRA@0.784288, 0 0 0 0 ENSG00000225988.1 ENST00000443469.1 chr20:9485827-9495645 5 1923 7887 exonic 12.10 0 0,0,1 0 0,0,0 11.9485179407176 11.1539241790288 268.11 32.8289131565263 9.66856853049322 246.367 32.8055122204888 11.9163179916318 216.708 0 0 chimp,dog,human,macaque,marmoset, antisense antisense A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0.006038,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0.032753, 0 0 0 0 ENSG00000232738.1 ENST00000428769.1 chr20:9556255-9558336 2 463 1616 intronic 0.80 0 0,0,0 0 0,0,0 0 0 0 69.9114470842333 1.18316831683168 2.379 78.2354211663067 1.2029702970297 2.155 0 0 cat,chimp,dog,guinea_pig,horse,human,macaque,marmoset,mouse,orangutan,panda,pig,rabbit, antisense antisense A549@0,AG04450@0,BJ@0.0069595,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000243961.1 ENST00000449270.1 chr20:9966736-9987764 2 1034 19992 intergenic 1.91 1 0,0,1 0 0,0,0 21.6499032882012 7.96183473389356 27.724 7.55802707930368 6.6469587835134 18.865 11.6537717601547 8.85989395758303 27.083 0 0 chimp,dog,elephant,guinea_pig,horse,human,macaque,marmoset,orangutan,panda,rabbit, processed_transcript processed_transcript A549@0.047537,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0.0040945,NHEK@0.0102517,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000227906.1 ENST00000438646.1 chr20:10006264-10015972 3 821 8883 exonic 6.02 0 0,0,0 0 0,0,0 0 0 0 0 1.1510750872453 1.841 0 2.78892266126309 1.904 0 0 chimp,horse,human,macaque,marmoset,orangutan, lincRNA processed_transcript A549@0.478119,AG04450@0.111758,BJ@0.0907935,GM12878@0.0424235,H1HESC@0,HELAS3@0.212817,HEPG2@0.3575,HMEC@0,HSMM@0,HUVEC@0.11249,K562@0,MCF7@0,NHEK@0.028733,NHLF@0.043826,SKNSHRA@1.93254, 0 0 0 0 ENSG00000227906.1 ENST00000421143.1 chr20:10006723-10349451 4 888 341834 encompassing 1.84 0 0,1,0 0 0,0,0 0 19.1552946751932 0 0 23.5563021817607 1.912 0 25.5755746941498 2.008 0 0 chimp,human,macaque,marmoset,orangutan, lincRNA processed_transcript A549@0.478119,AG04450@0.111758,BJ@0.0907935,GM12878@0.0424235,H1HESC@0,HELAS3@0.212817,HEPG2@0.3575,HMEC@0,HSMM@0,HUVEC@0.11249,K562@0,MCF7@0,NHEK@0.028733,NHLF@0.043826,SKNSHRA@1.93254, 0 0 0 0 ENSG00000227906.1 ENST00000426491.1 chr20:10055085-10200154 5 799 144262 intronic -0.08 0 0,1,0 1 0,0,0 121.455569461827 15.8881132938681 78.752 101.688360450563 15.3704856441752 98.205 97.0438047559449 15.8480265073269 88.029 0 0 chimp,human,macaque,marmoset,orangutan,rat, lincRNA processed_transcript A549@0.478119,AG04450@0.111758,BJ@0.0907935,GM12878@0.0424235,H1HESC@0,HELAS3@0.212817,HEPG2@0.3575,HMEC@0,HSMM@0,HUVEC@0.11249,K562@0,MCF7@0,NHEK@0.028733,NHLF@0.043826,SKNSHRA@1.93254, 0 0 0 0 ENSG00000227906.1 ENST00000451151.1 chr20:10084789-10199963 3 450 114720 intronic -0.90 0 0,0,0 0 0,0,0 57.6 14.3478556485356 135.648 67.7111111111111 17.3708943514644 135.172 64.7755555555556 17.7269264295677 120.196 0 0 horse,human,macaque,marmoset,orangutan, lincRNA processed_transcript A549@0.478119,AG04450@0.111758,BJ@0.0907935,GM12878@0.0424235,H1HESC@0,HELAS3@0.212817,HEPG2@0.3575,HMEC@0,HSMM@0,HUVEC@0.11249,K562@0,MCF7@0,NHEK@0.028733,NHLF@0.043826,SKNSHRA@1.93254, 0 0 0 0 ENSG00000227906.1 ENST00000453544.1 chr20:10084993-10349424 4 364 264061 intronic 4.43 0 0,1,0 0 0,0,0 0 22.1604515623284 0 0 26.3482983098602 1.912 0 28.5897614566331 2.008 0 0 cat,chimp,dog,horse,human,macaque,orangutan, lincRNA processed_transcript A549@0.478119,AG04450@0.111758,BJ@0.0907935,GM12878@0.0424235,H1HESC@0,HELAS3@0.212817,HEPG2@0.3575,HMEC@0,HSMM@0,HUVEC@0.11249,K562@0,MCF7@0,NHEK@0.028733,NHLF@0.043826,SKNSHRA@1.93254, 0 0 0 0 ENSG00000230506.1 ENST00000424931.1 chr20:10154168-10177638 2 347 23121 intergenic -1.21 0 0,1,0 0 0,0,0 15.2363112391931 3.98096968124216 68.291 104.991354466859 3.7099173911163 54.571 103.00288184438 4.62328619004368 57.196 0 0 cat,chimp,cow,dog,elephant,guinea_pig,human,macaque,marmoset,mouse,orangutan,pig,rabbit,rat, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0.0041375,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0.012298, 0 0 0 0 ENSG00000232448.1 ENST00000458004.1 chr20:10160883-10166423 3 443 5093 intergenic 0 1 0,0,0 0 0,0,0 0 6.0475161987041 0 0 3.82269782053799 0 0 4.30139407029256 3.159 0 0 chimp,human,macaque,marmoset,orangutan,rabbit, lincRNA lincRNA A549@0.096937,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0.033807,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0.004508,NHEK@0,NHLF@0,SKNSHRA@0.0056645, 0 0 0 0 ENSG00000245640.1 ENST00000501369.1 chr20:10642578-10643711 2 1045 86 exonic 2.37 0 0,1,1 0 0,0,0 24.4019138755981 0 0 8.29665071770335 0 1.38 10.3196172248804 0 1.458 0 0 chimp,dog,horse,human,macaque,marmoset,orangutan,panda, lincRNA lincRNA A549@0.0488655,AG04450@0.0168175,BJ@0.0205035,GM12878@0.008923,H1HESC@0.0055595,HELAS3@0.043854,HEPG2@0.0335245,HMEC@0,HSMM@0,HUVEC@0,K562@0.002557,MCF7@0,NHEK@0.00744267,NHLF@0,SKNSHRA@0.043083, 0 0 0 0 ENSG00000224961.1 ENST00000417299.1 chr20:10733738-10734614 2 436 438 intergenic 1.28 1 0,1,1 0 0,0,0 0 0 8.569 0 0 64.29 0 0 75.772 0 0 cat,chimp,cow,dog,elephant,guinea_pig,horse,human,macaque,marmoset,mouse,orangutan,panda,rabbit,rat, lincRNA lincRNA A549@0.124093,AG04450@0.015871,BJ@0.04433,GM12878@0.0225585,H1HESC@0,HELAS3@0,HEPG2@0.024528,HMEC@0,HSMM@0,HUVEC@0.042132,K562@0,MCF7@0,NHEK@0.373638,NHLF@0.026432,SKNSHRA@0.01036, 0 0 0 0 ENSG00000234900.1 ENST00000418690.1 chr20:10733926-10745934 3 726 11278 intergenic 7.71 0 0,0,0 0 0,0,0 87.2727272727273 38.897499556659 0 83.2121212121212 46.0378613229296 0 65.0592286501377 43.944405036354 0 0 0 cat,chimp,cow,dog,elephant,guinea_pig,horse,human,macaque,marmoset,orangutan,panda,pig,rabbit,rat, lincRNA lincRNA A549@0.005955,AG04450@0.0032305,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0.00316267,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000232911.1 ENST00000421788.1 chr20:10845303-10847830 3 265 2258 intergenic -0.32 0 1,1,1 0 0,0,0 0 44.1204605845881 53.89 13.2452830188679 75.3396811337467 50.477 61.9924528301887 79.5859167404783 42.644 0 0 chimp,horse,human,macaque,marmoset,orangutan,rabbit, lincRNA lincRNA A549@0.0161985,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0.00795,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0.0485773,NHLF@0.028799,SKNSHRA@0, 0 0 0 0 ENSG00000232900.1 ENST00000448859.1 chr20:10855981-10889920 7 1999 31928 intergenic 3.08 1 0,0,1 0 0,0,0 0 23.344650463543 0 0.620310155077539 28.9551804059133 7.314 0.647823911955978 38.5212665998497 7.784 0 0 chimp,guinea_pig,human,marmoset,orangutan, processed_transcript processed_transcript A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000230990.1 ENST00000444792.1 chr20:11214818-11282173 8 1097 66244 intergenic 2.72 0 0,0,1 0 0,0,0 13.6463081130356 24.1885000905742 99.527 4.79307201458523 31.0409697482036 110.89 2.05925250683683 32.0795694704426 115.755 0 0 chimp,horse,human,macaque,marmoset,orangutan,pig, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000230990.1 ENST00000412405.1 chr20:11246764-11249483 2 412 2305 intergenic -0.45 0 0,1,1 0 0,0,0 0 75.7149674620391 0 0 97.9631236442516 0 0 98.2845986984816 0 0 0 chimp,elephant,horse,human,macaque,marmoset,orangutan,pig, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000236526.1 ENST00000439529.1 chr20:11890052-11899325 3 1828 7441 exonic 1.43 1 0,1,0 0 0,0,0 122.830962800875 69.0110200241903 305.743 108.730306345733 59.9117054159387 276.775 120.112691466083 62.4645880929982 243.035 0 0 cat,chimp,elephant,guinea_pig,horse,human,macaque,marmoset,panda,pig,rat, antisense antisense A549@0.002371,AG04450@0,BJ@0.0109775,GM12878@0.0029005,H1HESC@0,HELAS3@0.005106,HEPG2@0.006982,HMEC@0,HSMM@0,HUVEC@0.0340415,K562@0,MCF7@0,NHEK@0.001442,NHLF@0.057238,SKNSHRA@0.0024785, 0 0 0 0 ENSG00000235292.1 ENST00000455132.1 chr20:12224543-12224944 2 278 121 intergenic 0 1 0,1,1 0 0,0,0 6.15107913669065 0 0 1.71942446043165 0 0 1.80575539568345 0 0 0 0 chimp,elephant,human,macaque,marmoset,orangutan, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000230437.1 ENST00000442389.1 chr20:12286261-12297133 2 471 10399 intergenic -5.78 1 0,0,0 0 0,0,0 97.8853503184713 14.5645735166843 0 70.0212314225053 14.9745167804597 6.486 59.5753715498938 15.8276757380517 6.883 0 0 cat,chimp,cow,dog,elephant,guinea_pig,horse,human,macaque,marmoset,orangutan,panda,pig,platypus,rabbit,rat, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000233048.1 ENST00000456265.1 chr20:12845850-12933167 12 3021 84274 intergenic 6.79 1 0,0,1 0 0,0,0 0 8.36197403706956 0 0 9.24594774188956 0 0.747765640516385 9.75839523459193 0 0 0 chimp,human,marmoset,orangutan, lincRNA lincRNA A549@0.0080565,AG04450@0.001478,BJ@0.0015955,GM12878@0.00463,H1HESC@0.010757,HELAS3@0.0090025,HEPG2@0.0021075,HMEC@0,HSMM@0.0007515,HUVEC@0.0019625,K562@0.002341,MCF7@0.0040675,NHEK@0.000434333,NHLF@0,SKNSHRA@0.0082515, 0 0 0 0 ENSG00000235234.1 ENST00000449841.1 chr20:12916687-12917842 2 482 671 intergenic 1.81 1 0,0,0 0 0,0,0 0 0 0 0 0 0 0 0 0 0 0 chimp,human,marmoset,orangutan, lincRNA lincRNA A549@0.005707,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0.004402,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0.004154,NHEK@0,NHLF@0,SKNSHRA@0, 151 2 95 2 ENSG00000234265.1 ENST00000432244.1 chr20:12930986-12932275 2 599 688 intergenic -0.65 1 0,0,0 0 0,0,0 0 0 0 0 0 0 0 0 0 0 0 chimp,elephant,human,marmoset,orangutan, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 151 2 95 2 ENSG00000238144.1 ENST00000445249.1 chr20:13000031-13000437 2 351 53 intronic -7.20 0 0,0,1 0 0,0,0 0 0 0 0 0 0 0 0 0 0 0 chimp,horse,human,macaque,marmoset,orangutan,rabbit, antisense antisense A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0.0120715,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0.0220753,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000226263.1 ENST00000431407.1 chr20:13218448-13220321 3 649 1220 intronic 2.06 0 0,0,0 0 0,0,0 132.406779661017 28.744262295082 0 253.633281972265 20.1590163934426 0 184.02311248074 32.2491803278688 0 0 0 chimp,human,macaque,marmoset,mouse,orangutan,pig,rabbit,rat, antisense antisense A549@0.113717,AG04450@0.0167665,BJ@0.0222385,GM12878@0.0304645,H1HESC@0.196574,HELAS3@0.24481,HEPG2@0.549392,HMEC@0.01884,HSMM@0.0094675,HUVEC@0.0692595,K562@0.0668335,MCF7@0.122126,NHEK@0.00803267,NHLF@0,SKNSHRA@0.151377, 0 0 0 0 ENSG00000225956.1 ENST00000420044.1 chr20:13224711-13226016 2 444 859 intronic 2.51 0 0,1,0 0 0,0,0 0 0 0 0 17.0384167636787 0 0 47.2630966239814 0 0 0 chimp,horse,human,macaque,mouse,orangutan, antisense antisense A549@0.066653,AG04450@0.0338875,BJ@0,GM12878@0.0195505,H1HESC@0.0133265,HELAS3@0.149744,HEPG2@0.370702,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0.00922,NHEK@0,NHLF@0,SKNSHRA@0.0666325, 0 0 0 0 ENSG00000227927.1 ENST00000448536.1 chr20:14535030-14609554 5 660 73856 intronic 1.56 1 0,0,1 0 0,0,0 53.8712121212121 29.0659526646447 0 33.5454545454545 26.4208595103986 2.04 22.7 27.4622102469671 1.944 0 0 chimp,cow,dog,human,macaque,marmoset,orangutan,panda,pig, processed_transcript processed_transcript A549@0.0088245,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0.0094775,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0.012164,NHEK@0.00367967,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000235914.1 ENST00000455291.1 chr20:14864899-14910132 3 660 44569 intronic 2.87 1 0,0,1 0 0,0,0 0 23.4245776212165 0 0 29.8476968296349 0 0 29.7806547151608 0 0 0 cat,chimp,dog,elephant,horse,human,macaque,marmoset,orangutan,rabbit, antisense non_coding A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0.003912,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000235914.1 ENST00000439451.1 chr20:14885587-14910161 2 1228 23344 intronic 0.02 1 0,0,1 0 0,0,0 5.78664495114007 40.3384167237834 0 0 50.5364547635367 0 0 48.7601953392735 0 0 0 cat,chimp,cow,dog,elephant,horse,human,macaque,marmoset,orangutan,panda,rabbit, antisense non_coding A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0.003912,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000237832.1 ENST00000441428.1 chr20:14914489-14916009 3 368 1148 intronic -0.01 1 0,0,0 0 0,0,0 0 0 0 0 0 0 0 0 0 0 0 NA antisense antisense A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000225181.1 ENST00000453972.1 chr20:15532802-15533530 2 517 209 intronic 2.46 0 0,0,0 0 0,0,0 0 0 0 0 0 0 8.21663442940039 0 0 0 0 chimp,cow,dog,elephant,horse,human,macaque,marmoset,orangutan, antisense antisense A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0.022904,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000228809.1 ENST00000425939.1 chr20:16695489-16711593 4 1097 15001 intronic -6.17 0 0,0,0 0 0,0,0 0 22.0655956269582 30.699 0 18.1487900806613 41.144 0 19.6429571361909 48.803 0 0 chimp,human,macaque,marmoset,orangutan,rabbit, antisense antisense A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0.00176933,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000236985.1 ENST00000422574.1 chr20:16838607-16844793 3 830 5352 intergenic 6.09 0 0,0,0 0 0,0,0 0 0 0 0 7.03437967115097 1.488 0 7.27428998505232 1.506 0 0 chimp,human,macaque,marmoset,orangutan, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0.0112555,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0.00494,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000233625.1 ENST00000425405.1 chr20:17868007-17868804 2 630 165 intergenic -7.62 0 0,0,0 0 0,0,0 0 0 0 15.115873015873 0 0 17.5174603174603 0 0 0 0 cat,chimp,cow,dog,elephant,horse,human,macaque,marmoset,orangutan,pig,rabbit, lincRNA lincRNA A549@0.0053365,AG04450@0.0742275,BJ@0.030943,GM12878@0.0681675,H1HESC@0,HELAS3@0.013209,HEPG2@0.006885,HMEC@0.038873,HSMM@0.10365,HUVEC@0.042253,K562@0.016945,MCF7@0.013013,NHEK@0.0218883,NHLF@0.021474,SKNSHRA@0, 0 0 0 0 ENSG00000229262.1 ENST00000429853.1 chr20:18040137-18051652 2 398 11115 intergenic -5.99 1 0,1,1 0 0,0,0 0 3.8600089968511 0 23.4497487437186 2.85155195681511 35.543 25.929648241206 4.3340530814215 38.551 0 0 cat,chimp,cow,horse,human,marmoset,mouse,orangutan,panda,pig, antisense antisense A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0.0061865,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0.0102805,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000237259.1 ENST00000436848.1 chr20:18294409-18295755 2 256 1088 exonic 0.42 0 0,0,0 0 0,0,0 0 0 318.105 0 1.875 333.541 30.40625 3.94852941176471 242.447 0 0 chimp,human,macaque,marmoset,orangutan, antisense antisense A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0.0102343,NHLF@0.0149575,SKNSHRA@0, 0 0 0 0 ENSG00000230010.1 ENST00000457009.1 chr20:18303196-18339944 5 2485 34255 intergenic 2.00 1 0,0,1 0 0,0,0 0 0 0 0 0 0 12.0112676056338 19.1907458765144 4.86 0 0 chimp,human,macaque,orangutan, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0.0016765,HEPG2@0.010287,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0.0121115,SKNSHRA@0.0021605, 0 0 0 0 ENSG00000230010.1 ENST00000412241.1 chr20:18304299-18339903 5 450 35146 intergenic 2.08 0 0,0,0 0 0,0,0 0 0 0 0 0 0 0 18.0833665281967 4.86 0 0 chimp,human,macaque,orangutan, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0.0016765,HEPG2@0.010287,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0.0121115,SKNSHRA@0.0021605, 0 0 0 0 ENSG00000237282.2 ENST00000423033.1 chr20:18359693-18362128 2 725 1708 intergenic -0.51 1 0,1,0 0 0,0,0 0 0 0 0 0 0 0 0 0 0 0 cat,chimp,horse,human,macaque,marmoset,orangutan, antisense antisense A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0.019812,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000232388.1 ENST00000411646.1 chr20:18548064-18550207 2 503 1638 intergenic 10.34 1 1,1,1 1 0,0,0 0 0 0 72.0258449304175 0.358974358974359 4.398 65.6282306163022 0.371184371184371 5.506 0 0 cat,chimp,cow,dog,elephant,horse,human,macaque,marmoset,opossum,orangutan,pig,rabbit,rat, lincRNA lincRNA A549@66.7363,AG04450@26.544,BJ@35.7178,GM12878@29.6258,H1HESC@13.4993,HELAS3@41.2149,HEPG2@62.1089,HMEC@25.3648,HSMM@24.8638,HUVEC@19.4436,K562@20.1898,MCF7@19.0629,NHEK@25.8124,NHLF@23.894,SKNSHRA@37.014, 0 0 0 0 ENSG00000232388.1 ENST00000435844.1 chr20:18548064-18550207 2 500 1641 intergenic 10.80 1 1,1,1 1 0,0,0 0 0 0 72.458 0.358318098720293 4.398 66.022 0.370505789152956 5.506 0 0 cat,chimp,cow,dog,elephant,horse,human,macaque,marmoset,mouse,opossum,orangutan,pig,rabbit,rat, lincRNA lincRNA A549@66.7363,AG04450@26.544,BJ@35.7178,GM12878@29.6258,H1HESC@13.4993,HELAS3@41.2149,HEPG2@62.1089,HMEC@25.3648,HSMM@24.8638,HUVEC@19.4436,K562@20.1898,MCF7@19.0629,NHEK@25.8124,NHLF@23.894,SKNSHRA@37.014, 0 0 0 0 ENSG00000233993.1 ENST00000428285.1 chr20:18655039-18679353 4 1691 22617 intronic 2.80 0 0,0,0 0 0,0,0 17.8509757539917 4.8263695450325 0 2.65996451803666 4.57332979617102 0 3.73270254287404 9.79502144404651 0 0 0 chimp,human,macaque,marmoset,orangutan,pig, antisense antisense A549@0,AG04450@0,BJ@0,GM12878@0.0034505,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000179935.5 ENST00000412553.1 chr20:18768295-18774637 3 1710 4628 intergenic 5.10 0 0,1,0 1 0,0,0 0 14.3344857389801 0 0 44.6296456352636 0 0 43.9608902333621 0 0 0 chimp,human,macaque,orangutan, lincRNA processed_transcript A549@0.0199505,AG04450@0.014301,BJ@0,GM12878@0.02086,H1HESC@0.0983145,HELAS3@0.0794745,HEPG2@0.144288,HMEC@0.00239,HSMM@0.061032,HUVEC@0,K562@0,MCF7@0.0059745,NHEK@0.00382133,NHLF@0.0102005,SKNSHRA@0.041469, 0 0 0 0 ENSG00000179935.5 ENST00000455340.1 chr20:18769191-18774979 4 730 5052 intergenic 5.10 0 0,1,0 0 0,0,0 0 13.1314330958036 0 0 40.8840063341251 0 0 40.271377672209 0 0 0 chimp,horse,human,macaque,marmoset,orangutan, lincRNA processed_transcript A549@0.0199505,AG04450@0.014301,BJ@0,GM12878@0.02086,H1HESC@0.0983145,HELAS3@0.0794745,HEPG2@0.144288,HMEC@0.00239,HSMM@0.061032,HUVEC@0,K562@0,MCF7@0.0059745,NHEK@0.00382133,NHLF@0.0102005,SKNSHRA@0.041469, 0 0 0 0 ENSG00000179935.5 ENST00000454749.1 chr20:18769308-18774933 5 958 4659 intergenic 3.76 0 0,0,0 0 0,0,0 0 14.2391071045289 0 0 44.3326894183301 0 0 43.6683837733419 0 0 0 chimp,horse,human,macaque,orangutan, lincRNA processed_transcript A549@0.0199505,AG04450@0.014301,BJ@0,GM12878@0.02086,H1HESC@0.0983145,HELAS3@0.0794745,HEPG2@0.144288,HMEC@0.00239,HSMM@0.061032,HUVEC@0,K562@0,MCF7@0.0059745,NHEK@0.00382133,NHLF@0.0102005,SKNSHRA@0.041469, 0 0 0 0 ENSG00000235996.1 ENST00000446849.1 chr20:19193496-19194121 2 364 259 exonic 0 0 0,0,1 0 0,0,0 93.956043956044 27.7992277992278 0 189.667582417582 119.555984555985 33.49 173.914835164835 66.5057915057915 34.357 0 0 chimp,cow,dog,guinea_pig,horse,human,macaque,marmoset,mouse,orangutan,panda,rabbit, antisense antisense A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0.057521,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000179447.2 ENST00000319682.2 chr20:19222946-19265240 8 1781 40499 intronic 3.13 0 0,0,0 0 0,0,0 0 8.93222054865552 0 1.44637843907917 13.9489617027581 3.06 1.48231330713083 14.4743573915405 3.264 0 0 chimp,horse,human,macaque,marmoset,orangutan, antisense antisense A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0.0156745,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0.0022475,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000232675.1 ENST00000435992.1 chr20:19673883-19677414 2 377 3152 exonic -4.25 0 0,0,0 0 0,0,0 220.604774535809 0 23.247 204.424403183024 1.63071065989848 55.3 244.588859416446 2.12055837563452 54.725 0 0 cat,chimp,dog,elephant,human,macaque,marmoset,opossum,orangutan,panda,rabbit, antisense antisense A549@0,AG04450@0.0156225,BJ@0.037761,GM12878@0.0246505,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0.006967,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000233895.1 ENST00000432334.1 chr20:19738352-19780320 2 285 41681 intergenic -1.46 0 0,1,0 1 0,0,0 0 0.430411938293227 0 2.51578947368421 2.40380509104868 0 10.3157894736842 2.59497132986253 0 0 0 cat,chimp,horse,human,marmoset,orangutan,panda,pig, lincRNA lincRNA A549@0.437823,AG04450@0.837773,BJ@0.823883,GM12878@0.033001,H1HESC@0.0087795,HELAS3@0.306412,HEPG2@0.171428,HMEC@0.018145,HSMM@0.313944,HUVEC@0.655742,K562@0,MCF7@0.460677,NHEK@0.194621,NHLF@0.212808,SKNSHRA@0.74099, 0 0 0 0 ENSG00000233895.1 ENST00000412571.1 chr20:19738792-19789926 3 412 50718 intergenic 0 0 0,1,0 1 0,0,0 1.6747572815534 1.49867896999093 0 201.179611650485 2.9091643992271 8.419 49.1553398058252 3.24338499152175 11.396 0 0 cat,chimp,cow,elephant,horse,human,macaque,marmoset,orangutan,pig,rabbit, lincRNA lincRNA A549@0.437823,AG04450@0.837773,BJ@0.823883,GM12878@0.033001,H1HESC@0.0087795,HELAS3@0.306412,HEPG2@0.171428,HMEC@0.018145,HSMM@0.313944,HUVEC@0.655742,K562@0,MCF7@0.460677,NHEK@0.194621,NHLF@0.212808,SKNSHRA@0.74099, 0 0 0 0 ENSG00000233895.1 ENST00000426012.1 chr20:19780217-19790319 2 675 9425 intergenic 2.69 0 0,0,1 0 0,0,0 0 6.25888594164456 0 2.12444444444444 8.35427055702918 0 4.39111111111111 8.94938992042441 0 0 0 cat,chimp,cow,dog,human,macaque,marmoset,orangutan, lincRNA lincRNA A549@0.437823,AG04450@0.837773,BJ@0.823883,GM12878@0.033001,H1HESC@0.0087795,HELAS3@0.306412,HEPG2@0.171428,HMEC@0.018145,HSMM@0.313944,HUVEC@0.655742,K562@0,MCF7@0.460677,NHEK@0.194621,NHLF@0.212808,SKNSHRA@0.74099, 0 0 0 0 ENSG00000241054.1 ENST00000470758.1 chr20:20075045-20076328 2 431 850 intronic -1.62 1 0,0,0 0 0,0,0 14.907192575406 4.53529411764706 284.048 67.2389791183295 14.8070588235294 229.272 58.538283062645 13.1270588235294 217.928 0 0 cat,chimp,dog,guinea_pig,horse,human,macaque,marmoset,orangutan,panda,pig, antisense antisense A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0.024847, 0 0 0 0 ENSG00000225417.1 ENST00000443692.1 chr20:20194943-20195906 2 280 681 intronic 5.14 0 0,1,0 0 0,0,0 0 0 208.26 0 0 240.147 0 0 216.744 0 0 cat,chimp,dog,horse,human,macaque,marmoset,orangutan,panda, antisense antisense A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000243810.1 ENST00000460400.1 chr20:20239051-20248453 3 565 8833 intronic -2.13 0 0,1,0 0 0,0,0 0 25.5417185554172 29.238 0 33.7670100758519 28.943 0 31.2902751047209 34.89 0 0 chimp,human,macaque,orangutan, antisense antisense A549@0,AG04450@0,BJ@0.017042,GM12878@0,H1HESC@0.078146,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0.0040135,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0.0269445, 0 0 0 0 ENSG00000227223.1 ENST00000417696.1 chr20:20702317-20703034 2 388 327 intergenic -15.90 0 0,1,0 0 0,0,0 0 0 0 0 0 7.56 116.479381443299 0 8.075 0 0 cat,chimp,cow,dog,elephant,guinea_pig,horse,human,macaque,marmoset,mouse,orangutan,panda,pig,rabbit,rat, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0.0074985,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000234104.1 ENST00000432942.1 chr20:20951089-20953203 2 510 1602 intergenic 2.89 0 0,1,0 0 0,0,0 122.549019607843 373.021847690387 435.846 69.6176470588235 428.807116104869 509.006 72.3254901960784 462.870786516854 544.04 0 0 chimp,cow,elephant,guinea_pig,horse,human,macaque,marmoset,orangutan,pig,rabbit, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000225127.1 ENST00000455890.1 chr20:21074190-21082200 2 478 7530 intergenic 0.93 0 0,1,1 0 0,0,0 0 91.094422310757 20.44 8.28870292887029 127.668791500664 10.268 8.46443514644352 117.171447543161 10.132 0 0 chimp,dog,human,macaque,marmoset,orangutan,panda,rabbit, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0.031392,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000225127.1 ENST00000420705.1 chr20:21074199-21086975 2 357 12417 intergenic 0.93 0 0,1,1 1 0,0,0 0 68.9619875976484 32.436 15.4957983193277 92.521945719578 58.431 15.8291316526611 85.955142143835 64.417 0 0 cat,chimp,cow,dog,elephant,horse,human,macaque,marmoset,mouse,orangutan,panda,pig,rabbit,rat, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0.031392,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000088970.10 ENST00000424111.2 chr20:21106624-21227256 12 1929 118681 intergenic 9.67 1 1,1,1 1 0,1,1 245.969932607569 25.5956387290299 0 252.818040435459 27.7048895779442 1.578 271.087091757387 33.9018882550703 1.704 0 0 chimp,dog,elephant,horse,human,macaque,marmoset,mouse,orangutan,panda,rabbit, lincRNA processed_transcript A549@3.46281,AG04450@4.91304,BJ@4.99012,GM12878@3.32294,H1HESC@5.47157,HELAS3@6.00769,HEPG2@20.0785,HMEC@3.98343,HSMM@2.99327,HUVEC@1.27185,K562@7.11031,MCF7@1.48218,NHEK@2.67677,NHLF@2.13135,SKNSHRA@2.26479, 0 0 0 0 ENSG00000088970.10 ENST00000427692.2 chr20:21106624-21227256 14 2180 118426 intergenic 9.67 1 1,1,1 1 0,1,1 236.076146788991 25.3070187289953 0 249.468348623853 27.2817540067215 1.578 285.609174311927 33.4787546653606 1.704 0 0 chimp,dog,elephant,horse,human,macaque,marmoset,mouse,orangutan,panda,pig,rabbit,rat, lincRNA processed_transcript A549@3.46281,AG04450@4.91304,BJ@4.99012,GM12878@3.32294,H1HESC@5.47157,HELAS3@6.00769,HEPG2@20.0785,HMEC@3.98343,HSMM@2.99327,HUVEC@1.27185,K562@7.11031,MCF7@1.48218,NHEK@2.67677,NHLF@2.13135,SKNSHRA@2.26479, 0 0 0 0 ENSG00000088970.10 ENST00000458446.2 chr20:21106624-21227256 14 2129 118477 intergenic 9.67 1 1,1,1 1 0,1,1 241.731329262565 25.2961249862843 0 255.444340065758 27.2700102129527 1.578 291.76608736496 33.4766494762696 1.704 0 0 cat,chimp,dog,elephant,guinea_pig,horse,human,macaque,marmoset,orangutan,rabbit, lincRNA processed_transcript A549@3.46281,AG04450@4.91304,BJ@4.99012,GM12878@3.32294,H1HESC@5.47157,HELAS3@6.00769,HEPG2@20.0785,HMEC@3.98343,HSMM@2.99327,HUVEC@1.27185,K562@7.11031,MCF7@1.48218,NHEK@2.67677,NHLF@2.13135,SKNSHRA@2.26479, 0 0 0 0 ENSG00000088970.10 ENST00000445992.1 chr20:21106648-21143148 4 984 35510 intergenic 12.02 0 0,1,1 1 0,1,1 382.900406504065 32.1617290903971 0 346.714430894309 29.2018023092087 3.562 338.669715447155 32.6942833004787 1.704 0 0 cat,chimp,cow,dog,elephant,guinea_pig,horse,human,macaque,marmoset,mouse,orangutan,panda,pig,rabbit, lincRNA processed_transcript A549@3.46281,AG04450@4.91304,BJ@4.99012,GM12878@3.32294,H1HESC@5.47157,HELAS3@6.00769,HEPG2@20.0785,HMEC@3.98343,HSMM@2.99327,HUVEC@1.27185,K562@7.11031,MCF7@1.48218,NHEK@2.67677,NHLF@2.13135,SKNSHRA@2.26479, 0 0 0 0 ENSG00000088970.10 ENST00000246027.8 chr20:21106695-21227260 13 2116 118425 intergenic 2.98 1 1,1,1 1 0,1,1 243.216446124764 25.3072324255858 0 251.565217391304 27.2819843782985 13.107 289.208884688091 33.4790373654211 12.366 0 0 cat,chimp,cow,dog,elephant,horse,human,macaque,marmoset,mouse,orangutan,panda,rabbit, lincRNA processed_transcript A549@3.46281,AG04450@4.91304,BJ@4.99012,GM12878@3.32294,H1HESC@5.47157,HELAS3@6.00769,HEPG2@20.0785,HMEC@3.98343,HSMM@2.99327,HUVEC@1.27185,K562@7.11031,MCF7@1.48218,NHEK@2.67677,NHLF@2.13135,SKNSHRA@2.26479, 0 0 0 0 ENSG00000088970.10 ENST00000537654.1 chr20:21106725-21227256 13 1917 118590 intergenic 12.02 1 1,1,1 1 0,1,1 247.509650495566 25.6152795345307 0 254.720396452791 27.6211569272283 13.107 272.088158581116 33.8462770891306 12.366 0 0 cat,chimp,cow,dog,elephant,horse,human,macaque,marmoset,mouse,orangutan,panda,rabbit, lincRNA processed_transcript A549@3.46281,AG04450@4.91304,BJ@4.99012,GM12878@3.32294,H1HESC@5.47157,HELAS3@6.00769,HEPG2@20.0785,HMEC@3.98343,HSMM@2.99327,HUVEC@1.27185,K562@7.11031,MCF7@1.48218,NHEK@2.67677,NHLF@2.13135,SKNSHRA@2.26479, 0 0 0 0 ENSG00000088970.10 ENST00000432487.2 chr20:21125966-21227256 12 1740 99528 intergenic 2.98 1 0,0,1 0 0,1,1 261.391954022989 27.4062273932964 107.37 254.608045977011 30.3704485170002 38.303 275.379885057471 37.5725926372478 35.663 0 0 chimp,dog,elephant,horse,human,macaque,marmoset,mouse,orangutan,panda,rabbit, lincRNA processed_transcript A549@3.46281,AG04450@4.91304,BJ@4.99012,GM12878@3.32294,H1HESC@5.47157,HELAS3@6.00769,HEPG2@20.0785,HMEC@3.98343,HSMM@2.99327,HUVEC@1.27185,K562@7.11031,MCF7@1.48218,NHEK@2.67677,NHLF@2.13135,SKNSHRA@2.26479, 0 0 0 0 ENSG00000088970.10 ENST00000457464.1 chr20:21126227-21227260 8 3847 97172 intergenic 2.98 1 0,0,1 0 0,1,1 118.227709903821 27.9452620096324 119.56 114.015856511567 31.0334149755073 51.005 122.188458539121 38.4334273247437 50.932 1 1 chimp,human,macaque,marmoset,orangutan, lincRNA processed_transcript A549@3.46281,AG04450@4.91304,BJ@4.99012,GM12878@3.32294,H1HESC@5.47157,HELAS3@6.00769,HEPG2@20.0785,HMEC@3.98343,HSMM@2.99327,HUVEC@1.27185,K562@7.11031,MCF7@1.48218,NHEK@2.67677,NHLF@2.13135,SKNSHRA@2.26479, 0 0 0 0 ENSG00000088970.10 ENST00000447448.1 chr20:21126230-21227260 9 1653 99361 intergenic 2.98 1 0,0,1 0 0,1,1 275.149425287356 27.3296061835127 119.56 272.473684210526 30.4341542456296 52.022 292.633998790079 37.6743994122442 52.06 0 0 chimp,cow,dog,elephant,horse,human,macaque,marmoset,mouse,orangutan,panda,rabbit, lincRNA processed_transcript A549@3.46281,AG04450@4.91304,BJ@4.99012,GM12878@3.32294,H1HESC@5.47157,HELAS3@6.00769,HEPG2@20.0785,HMEC@3.98343,HSMM@2.99327,HUVEC@1.27185,K562@7.11031,MCF7@1.48218,NHEK@2.67677,NHLF@2.13135,SKNSHRA@2.26479, 0 0 0 0 ENSG00000228604.1 ENST00000434043.1 chr20:21129382-21139382 6 760 9230 intergenic 0.48 0 0,0,1 0 0,0,0 0 3.75514626218852 0 0 4.24247020585049 0 0 5.8273022751896 0 0 0 chimp,human,macaque,marmoset,orangutan,rabbit, lincRNA lincRNA A549@0,AG04450@0,BJ@0.0091975,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000228604.1 ENST00000425746.1 chr20:21132309-21143531 4 385 10831 intergenic -4.56 0 0,0,0 0 0,0,0 9.71428571428571 37.2888929923368 29.92 0 29.2176161019297 63.939 2.69090909090909 30.475394700397 56 0 0 cat,chimp,cow,dog,human,macaque,marmoset,mouse,orangutan,rat, lincRNA lincRNA A549@0,AG04450@0,BJ@0.0091975,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000088970.10 ENST00000428699.1 chr20:21142724-21227260 9 1387 83133 intergenic 2.98 1 0,1,1 0 0,1,1 239.877433309301 22.8026535792044 133.632 246.596971881759 26.9283798250995 89.897 268.796683489546 34.3343076756523 98.389 0 0 chimp,dog,elephant,human,macaque,marmoset,mouse,orangutan,rabbit,rat, lincRNA processed_transcript A549@3.46281,AG04450@4.91304,BJ@4.99012,GM12878@3.32294,H1HESC@5.47157,HELAS3@6.00769,HEPG2@20.0785,HMEC@3.98343,HSMM@2.99327,HUVEC@1.27185,K562@7.11031,MCF7@1.48218,NHEK@2.67677,NHLF@2.13135,SKNSHRA@2.26479, 0 0 0 0 ENSG00000232712.1 ENST00000443753.1 chr20:21175044-21198927 8 1153 22716 intergenic -1.56 1 0,0,0 0 0,0,0 14.050303555941 14.377971473851 0 8.36686903729402 23.567881669308 2.728 9.28534258456201 29.3449550977285 2.849 0 0 chimp,human,macaque,marmoset,orangutan, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000232712.1 ENST00000433213.1 chr20:21179171-21198903 4 559 19167 intergenic -1.26 0 0,0,1 0 0,0,0 0 9.91323629154276 0 0 19.4604267751865 2.728 1.68157423971377 25.2887254134711 2.849 0 0 chimp,cow,dog,elephant,horse,human,macaque,marmoset,mouse,orangutan,panda,pig,rabbit, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000088970.10 ENST00000451772.1 chr20:21199097-21224992 4 532 25357 intergenic -1.48 0 0,0,0 0 0,1,1 44.4285714285714 44.8842134321884 0 47.3984962406015 53.4323855345664 0 53.6052631578947 57.0565918681232 0 0 0 cat,chimp,elephant,horse,human,macaque,marmoset,orangutan,rabbit, lincRNA processed_transcript A549@3.46281,AG04450@4.91304,BJ@4.99012,GM12878@3.32294,H1HESC@5.47157,HELAS3@6.00769,HEPG2@20.0785,HMEC@3.98343,HSMM@2.99327,HUVEC@1.27185,K562@7.11031,MCF7@1.48218,NHEK@2.67677,NHLF@2.13135,SKNSHRA@2.26479, 0 0 0 0 ENSG00000088970.10 ENST00000419359.1 chr20:21199102-21227258 5 512 27636 intergenic -1.93 1 0,0,1 0 0,1,1 124.65234375 40.0977348386163 0 160.814453125 48.5767477203648 0 183.619140625 51.737009697496 0 0 0 cat,chimp,cow,dog,elephant,guinea_pig,horse,human,macaque,marmoset,mouse,opossum,orangutan,panda,pig,rabbit,rat, lincRNA processed_transcript A549@3.46281,AG04450@4.91304,BJ@4.99012,GM12878@3.32294,H1HESC@5.47157,HELAS3@6.00769,HEPG2@20.0785,HMEC@3.98343,HSMM@2.99327,HUVEC@1.27185,K562@7.11031,MCF7@1.48218,NHEK@2.67677,NHLF@2.13135,SKNSHRA@2.26479, 0 0 0 0 ENSG00000088970.10 ENST00000441136.1 chr20:21206778-21213552 3 439 6331 intergenic -1.48 1 0,1,1 0 0,1,1 158.257403189066 1.24893381772232 0 119.261958997722 1.95656294424262 1.736 145.544419134396 2.46754067287948 3.888 0 0 cat,chimp,guinea_pig,human,macaque,marmoset,orangutan,panda,pig, lincRNA processed_transcript A549@3.46281,AG04450@4.91304,BJ@4.99012,GM12878@3.32294,H1HESC@5.47157,HELAS3@6.00769,HEPG2@20.0785,HMEC@3.98343,HSMM@2.99327,HUVEC@1.27185,K562@7.11031,MCF7@1.48218,NHEK@2.67677,NHLF@2.13135,SKNSHRA@2.26479, 0 0 0 0 ENSG00000088970.10 ENST00000423272.1 chr20:21225109-21227256 2 188 1957 intergenic -1.93 1 1,1,1 0 0,1,1 57.5 0 0 207.755319148936 3.44098109351048 10.141 226.324468085106 3.67347981604497 12.804 0 0 cat,chimp,cow,dog,elephant,guinea_pig,horse,human,macaque,marmoset,mouse,orangutan,panda,pig,rabbit,rat, lincRNA processed_transcript A549@3.46281,AG04450@4.91304,BJ@4.99012,GM12878@3.32294,H1HESC@5.47157,HELAS3@6.00769,HEPG2@20.0785,HMEC@3.98343,HSMM@2.99327,HUVEC@1.27185,K562@7.11031,MCF7@1.48218,NHEK@2.67677,NHLF@2.13135,SKNSHRA@2.26479, 0 0 0 0 ENSG00000225280.1 ENST00000419666.1 chr20:21379531-21381015 3 506 974 intergenic -6.18 1 0,0,0 0 0,0,0 0 7.45379876796715 73.85 16.7430830039526 9.27104722792608 116.666 17.5434782608696 8.37782340862423 127.078 0 0 cat,chimp,cow,dog,guinea_pig,horse,human,macaque,marmoset,mouse,orangutan,panda,pig,rabbit,rat, antisense antisense A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0.0040755,HELAS3@0,HEPG2@0.010718,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000233492.1 ENST00000431034.1 chr20:21510840-21511382 2 447 93 intergenic -5.15 0 0,0,0 0 0,0,0 0 0 179.733 11.2885906040268 0 191.794 4.14988814317673 0 175.722 0 0 cat,chimp,cow,dog,elephant,human,macaque,marmoset,orangutan,panda, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0.0052205,H1HESC@0.026475,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0.0051715,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000223871.2 ENST00000424377.2 chr20:21591425-21684223 5 1248 91542 intergenic 0.35 0 0,0,0 0 0,0,0 0 6.4734985034192 0 0 12.0819405300299 0 0 16.6850298223766 0 1 1 chimp,human,macaque,marmoset,orangutan, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000238034.1 ENST00000438222.1 chr20:21928285-21951421 2 567 22567 intergenic -8.44 1 0,0,0 0 0,0,0 53.4479717813051 8.32126556476271 110.751 71.4902998236332 12.9236495768157 102.933 71.8783068783069 12.4438782292728 145.264 0 0 chimp,dog,elephant,guinea_pig,horse,human,macaque,marmoset,orangutan,pig,rabbit, lincRNA lincRNA A549@0.0118545,AG04450@0,BJ@0,GM12878@0,H1HESC@0.0480935,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000234435.1 ENST00000449427.1 chr20:22034831-22055238 4 516 19885 intergenic -4.85 0 0,0,0 0 0,0,0 0 14.4084485793312 0 0 28.3273824490822 0 0 31.1660548151873 0 0 0 chimp,elephant,human,macaque,orangutan, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0.023024,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0.0174525, 0 0 0 0 ENSG00000234862.1 ENST00000439450.1 chr20:22201192-22203921 3 436 2289 intergenic -3.40 1 1,1,1 0 0,0,0 101.332568807339 0 71.28 54.5435779816514 0.943643512450852 11.245 53.3990825688073 1.68457841852337 18.658 0 0 cat,chimp,cow,elephant,human,macaque,marmoset,mouse,orangutan,pig,rabbit, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0.135193,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0.0300733,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000225321.1 ENST00000420928.1 chr20:22260866-22263310 3 501 1939 intergenic 0.72 1 0,0,0 0 0,0,0 0 0 0 0 0 0 0 0 0 0 0 chimp,elephant,human,macaque,marmoset,orangutan, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0.011793,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000204684.2 ENST00000377121.1 chr20:22380989-22401281 4 1662 18624 intergenic 4.23 1 0,1,0 0 0,0,0 0 54.6523303264605 0 0 61.9205863402062 0 0 68.5776417525773 0 0 0 chimp,horse,human,marmoset,orangutan,panda, lincRNA lincRNA A549@0.0187125,AG04450@0,BJ@0,GM12878@0.0123065,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0.006458, 0 0 0 0 ENSG00000243467.1 ENST00000420070.1 chr20:22528309-22541562 4 791 12456 intergenic 8.22 1 0,0,1 1 0,0,0 0 16.8827071290944 7.936 0 25.7199743095697 39.916 0 25.4833012202954 48.235 0 0 chimp,human,macaque,orangutan, lincRNA processed_transcript A549@0,AG04450@0.023525,BJ@0,GM12878@0.0631305,H1HESC@0,HELAS3@0,HEPG2@0.020687,HMEC@0,HSMM@0,HUVEC@0,K562@0.0026905,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000225074.2 ENST00000450346.1 chr20:22541191-22559280 4 4908 13175 intergenic 14.69 1 0,1,0 1 0,0,0 131.56499592502 44.4396204933586 260.169 117.114506927465 57.6427324478178 376.844 129.480236348818 57.6674003795066 368.615 0 0 chimp,human,macaque,marmoset,orangutan,panda, lincRNA ambiguous_orf A549@0.569173,AG04450@0.0004115,BJ@0,GM12878@0,H1HESC@0.00143,HELAS3@0.87017,HEPG2@8.98754,HMEC@0.004168,HSMM@0.000419,HUVEC@0,K562@0.0229575,MCF7@0.0029025,NHEK@0.00132433,NHLF@0,SKNSHRA@0.001132, 0 0 0 0 ENSG00000237396.1 ENST00000422494.1 chr20:22568160-22588155 3 656 19335 intergenic 1.88 1 0,0,0 0 0,0,0 4.72865853658537 8.42203258339798 301.474 10.2621951219512 12.9583656581329 219.823 11.3765243902439 14.4275665890871 181.071 0 0 chimp,horse,human,macaque,marmoset,orangutan, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000230400.1 ENST00000441568.1 chr20:22656710-22665516 2 2318 6486 intergenic -1.75 0 1,1,1 0 0,0,0 0 0 0 0 6.20644465001542 19.12 0 8.36123959296947 28.719 0 0 chimp,horse,human,macaque,marmoset,orangutan,panda, lincRNA lincRNA A549@0.0033165,AG04450@0.004272,BJ@0.002086,GM12878@0.0230255,H1HESC@0.0010665,HELAS3@0,HEPG2@0.004707,HMEC@0.001765,HSMM@0.0161295,HUVEC@0.218135,K562@0.029721,MCF7@0,NHEK@0.00729867,NHLF@0.0288425,SKNSHRA@0, 0 0 0 0 ENSG00000230400.1 ENST00000437696.1 chr20:22664300-22665982 3 562 1116 intergenic -3.95 0 0,0,0 0 0,0,0 0 0 0 0 3.95161290322581 19.12 0 7.45967741935484 28.719 0 0 cat,chimp,horse,human,macaque,marmoset,orangutan, lincRNA lincRNA A549@0.0033165,AG04450@0.004272,BJ@0.002086,GM12878@0.0230255,H1HESC@0.0010665,HELAS3@0,HEPG2@0.004707,HMEC@0.001765,HSMM@0.0161295,HUVEC@0.218135,K562@0.029721,MCF7@0,NHEK@0.00729867,NHLF@0.0288425,SKNSHRA@0, 0 0 0 0 ENSG00000230492.1 ENST00000440798.1 chr20:22990846-23011422 4 715 19855 intergenic 4.04 0 0,1,0 0 0,0,0 0 0 0 0 2.39743137748678 0 0 2.93608662805339 0 0 0 chimp,human,macaque,marmoset,orangutan, antisense antisense A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000234646.1 ENST00000440921.1 chr20:23012179-23019873 3 408 7282 encompassing -2.37 1 0,0,0 0 0,0,0 0 41.8299917605054 0 0 37.8037627025542 0 0 56.758170832189 0 0 0 chimp,human,macaque,orangutan, processed_transcript processed_transcript A549@0.0052815,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000234646.1 ENST00000419734.1 chr20:23018860-23019873 2 384 627 intergenic 0 1 0,1,0 0 0,0,0 0 0 0 0 0 0 0 0 0 0 0 chimp,horse,human,macaque,marmoset,orangutan, processed_transcript processed_transcript A549@0.0052815,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000233746.1 ENST00000443744.1 chr20:23105705-23113258 4 1892 5655 intergenic 1.20 1 1,1,1 0 0,0,0 0 0 0 0 0 9.315 0 0 12.372 0 0 human,macaque,marmoset,orangutan, lincRNA processed_transcript A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0.0183605,HMEC@0,HSMM@0,HUVEC@0.029361,K562@0.548835,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000230387.1 ENST00000411595.1 chr20:23168765-23170944 2 554 1623 intergenic 9.79 1 0,0,1 0 0,0,0 0 0 0 0 0 0 0 0 0 0 0 cat,chimp,dog,horse,human,macaque,marmoset,orangutan,panda, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0.238081,HEPG2@0.083402,HMEC@0,HSMM@0,HUVEC@0,K562@0.0088345,MCF7@0.050952,NHEK@0.0925967,NHLF@0,SKNSHRA@0.012256, 0 0 0 0 ENSG00000234832.1 ENST00000442884.1 chr20:23327578-23332123 2 812 3731 intronic -1.89 0 0,1,0 0 0,0,0 0 0 0 0 3.73921200750469 0 0 3.70168855534709 0 0 0 chimp,human,macaque,marmoset,orangutan, antisense antisense A549@0.350159,AG04450@0.088745,BJ@0.063558,GM12878@0.683188,H1HESC@0.189066,HELAS3@0.370584,HEPG2@0.41217,HMEC@0.035212,HSMM@0.0275995,HUVEC@0.249604,K562@0.23354,MCF7@0.375089,NHEK@0.170652,NHLF@0.007138,SKNSHRA@0.154105, 0 0 0 0 ENSG00000232645.1 ENST00000444981.1 chr20:23337231-23338492 3 451 806 intergenic -0.01 0 0,0,1 0 0,0,0 0 0 0 0 0 0 0 0 0 0 0 chimp,horse,human,macaque,marmoset,orangutan, antisense antisense A549@0.247184,AG04450@0.013361,BJ@0.056523,GM12878@0.049259,H1HESC@0.21145,HELAS3@0.096427,HEPG2@0.120242,HMEC@0.080661,HSMM@0.0956195,HUVEC@0.102765,K562@0.0575685,MCF7@0.215062,NHEK@0.0987603,NHLF@0.049494,SKNSHRA@0.171523, 0 0 0 0 ENSG00000232645.1 ENST00000442440.1 chr20:23337231-23338642 3 511 896 intergenic 0 0 1,1,1 1 0,0,0 0 0 0 0 0 0 0 0 0 0 0 chimp,horse,human,macaque,marmoset,orangutan, antisense antisense A549@0.247184,AG04450@0.013361,BJ@0.056523,GM12878@0.049259,H1HESC@0.21145,HELAS3@0.096427,HEPG2@0.120242,HMEC@0.080661,HSMM@0.0956195,HUVEC@0.102765,K562@0.0575685,MCF7@0.215062,NHEK@0.0987603,NHLF@0.049494,SKNSHRA@0.171523, 0 0 0 0 ENSG00000232645.1 ENST00000452395.1 chr20:23337432-23338753 2 503 816 intergenic 0 0 1,1,1 1 0,0,0 0 0 0 0 0 0 0 0 0 0 0 chimp,horse,human,macaque,marmoset,orangutan, antisense antisense A549@0.247184,AG04450@0.013361,BJ@0.056523,GM12878@0.049259,H1HESC@0.21145,HELAS3@0.096427,HEPG2@0.120242,HMEC@0.080661,HSMM@0.0956195,HUVEC@0.102765,K562@0.0575685,MCF7@0.215062,NHEK@0.0987603,NHLF@0.049494,SKNSHRA@0.171523, 0 0 0 0 ENSG00000225056.1 ENST00000450971.1 chr20:23635862-23637027 2 434 729 intergenic 4.30 0 0,0,0 0 0,0,0 0 0 0 13.3179723502304 3.93827160493827 0 13.8248847926267 3.96296296296296 0 0 0 cat,chimp,cow,dog,elephant,horse,human,macaque,marmoset,mouse,orangutan,panda,rat, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0.0167005,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000230908.1 ENST00000437012.1 chr20:23778778-23786300 4 793 6723 intergenic -6.24 0 0,0,0 0 0,0,0 0 0 0 0 0 0 0 0 0 0 0 chimp,human,macaque,marmoset,orangutan, antisense antisense A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000236151.1 ENST00000457224.1 chr20:24123226-24125022 2 532 1262 intergenic -1.00 0 0,1,0 0 0,0,0 0 0 0 0 0 0 0 0 0 0 0 chimp,human,macaque,marmoset,orangutan, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000230133.1 ENST00000457274.1 chr20:24180403-24205224 4 2372 22443 intergenic 5.18 0 0,1,0 0 0,0,0 0 0 0 0 0.300806487546228 0 0 0.822127166599831 0 0 0 chimp,human,orangutan, lincRNA lincRNA A549@0.0056775,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0.141286,NHEK@0,NHLF@0,SKNSHRA@0.0009565, 0 0 0 0 ENSG00000232200.1 ENST00000453921.1 chr20:24278221-24298722 5 498 19995 intergenic 2.13 1 0,0,1 0 0,0,0 0 0 0 0 0.290922730682671 0 4.87951807228916 1.35373843460865 0 0 0 cat,chimp,human,macaque,marmoset,orangutan, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000228539.1 ENST00000458461.1 chr20:24472108-24482981 3 820 10049 intronic 5.31 0 0,0,0 0 0,0,0 0 0 0 0 0.285401532490795 0 0 3.40829933326699 0 0 0 chimp,horse,human,macaque,marmoset,orangutan, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0.0155625,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000231015.1 ENST00000432834.1 chr20:24660183-24661627 2 803 639 intergenic 0.13 0 0,0,0 0 0,0,0 0 0 0 0 0 0 0 0 0 0 0 chimp,human,macaque,marmoset,orangutan, lincRNA lincRNA A549@0.015424,AG04450@0,BJ@0,GM12878@0,H1HESC@0.163678,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000250527.1 ENST00000508332.1 chr20:24911284-24913619 2 2154 179 intergenic -1.49 0 1,1,1 0 0,0,0 0 0 0 0 0 0 0 0 0 0 0 NA lincRNA lincRNA A549@0.005691,AG04450@0.0164775,BJ@0,GM12878@0.013315,H1HESC@0.0053995,HELAS3@0.0348485,HEPG2@0.0050605,HMEC@0.120969,HSMM@0,HUVEC@0,K562@0.0099345,MCF7@0.0097645,NHEK@0.00548133,NHLF@0,SKNSHRA@0.0012475, 0 0 0 0 ENSG00000230725.1 ENST00000454676.1 chr20:25121425-25129426 4 3164 4831 intergenic 8.59 1 0,1,1 1 0,0,0 4.01706700379267 9.90271165390188 0 3.7853982300885 13.5199751604223 1.434 7.57711757269279 13.3158766300973 1.458 0 0 chimp,human,macaque,marmoset, lincRNA processed_transcript A549@0,AG04450@0.0117115,BJ@0.005374,GM12878@0,H1HESC@0.0508975,HELAS3@0.0013175,HEPG2@0,HMEC@0,HSMM@0.009303,HUVEC@0,K562@0,MCF7@0,NHEK@0.002068,NHLF@0.004169,SKNSHRA@0.0007175, 0 0 0 0 ENSG00000230725.1 ENST00000438287.1 chr20:25123876-25129894 3 465 5549 intergenic -8.00 1 0,0,0 0 0,0,0 128.632258064516 0 0 145.954838709677 1.58082537394125 27.684 157.410752688172 2.47395927194089 41.787 0 0 cat,chimp,dog,horse,human,macaque,marmoset,orangutan,panda,rat, lincRNA processed_transcript A549@0,AG04450@0.0117115,BJ@0.005374,GM12878@0,H1HESC@0.0508975,HELAS3@0.0013175,HEPG2@0,HMEC@0,HSMM@0.009303,HUVEC@0,K562@0,MCF7@0,NHEK@0.002068,NHLF@0.004169,SKNSHRA@0.0007175, 0 0 0 0 ENSG00000230725.1 ENST00000426854.1 chr20:25124001-25128100 3 289 3806 intergenic 0 1 0,1,1 0 0,0,0 47.7993079584775 0 0 44.4429065743945 2.30478192327903 0 86.6401384083045 3.60693641618497 0 0 0 cat,chimp,dog,horse,human,macaque,marmoset,opossum,orangutan,panda,rat, lincRNA processed_transcript A549@0,AG04450@0.0117115,BJ@0.005374,GM12878@0,H1HESC@0.0508975,HELAS3@0.0013175,HEPG2@0,HMEC@0,HSMM@0.009303,HUVEC@0,K562@0,MCF7@0,NHEK@0.002068,NHLF@0.004169,SKNSHRA@0.0007175, 0 0 0 0 ENSG00000230725.1 ENST00000440357.1 chr20:25124001-25129876 3 340 5531 intergenic 0 1 0,0,1 0 0,0,0 40.6294117647059 0 0 37.7764705882353 1.58596998734406 27.684 73.6441176470588 2.48201048634967 40.754 0 0 cat,chimp,dog,horse,human,macaque,marmoset,mouse,orangutan,panda, lincRNA processed_transcript A549@0,AG04450@0.0117115,BJ@0.005374,GM12878@0,H1HESC@0.0508975,HELAS3@0.0013175,HEPG2@0,HMEC@0,HSMM@0.009303,HUVEC@0,K562@0,MCF7@0,NHEK@0.002068,NHLF@0.004169,SKNSHRA@0.0007175, 0 0 0 0 ENSG00000213742.2 ENST00000414393.1 chr20:25604681-25658710 5 4661 49360 exonic -1.99 1 0,1,1 1 0,0,0 194.386612314954 0 17.36 0.394979618107702 0.35129659643436 19.008 65.0049345633984 6.21705834683955 25.602 0 0 chimp,human,macaque,marmoset,orangutan, antisense antisense A549@2.41577,AG04450@0.8102,BJ@1.17272,GM12878@0.976248,H1HESC@1.51865,HELAS3@2.44548,HEPG2@2.13992,HMEC@0.311067,HSMM@0.299195,HUVEC@0.353996,K562@0.973595,MCF7@2.14932,NHEK@0.575959,NHLF@0.388539,SKNSHRA@1.92313, 0 0 0 0 ENSG00000213742.2 ENST00000455791.1 chr20:25604695-25657688 5 645 52340 exonic -3.51 1 1,1,1 1 0,0,0 0 17.3105846388995 17.36 2.85426356589147 0.331295376385174 19.008 19.9240310077519 11.079518532671 25.602 0 0 chimp,cow,dog,elephant,human,macaque,marmoset,orangutan,panda, antisense antisense A549@2.41577,AG04450@0.8102,BJ@1.17272,GM12878@0.976248,H1HESC@1.51865,HELAS3@2.44548,HEPG2@2.13992,HMEC@0.311067,HSMM@0.299195,HUVEC@0.353996,K562@0.973595,MCF7@2.14932,NHEK@0.575959,NHLF@0.388539,SKNSHRA@1.92313, 0 0 0 0 ENSG00000213742.2 ENST00000439498.1 chr20:25604695-25658184 4 960 52523 exonic -2.38 0 0,1,0 1 0,0,0 0 17.2502713097119 17.36 1.91770833333333 0.330141081050207 19.008 22.9739583333333 11.1857091179103 25.602 0 0 chimp,human,macaque,marmoset,orangutan, antisense antisense A549@2.41577,AG04450@0.8102,BJ@1.17272,GM12878@0.976248,H1HESC@1.51865,HELAS3@2.44548,HEPG2@2.13992,HMEC@0.311067,HSMM@0.299195,HUVEC@0.353996,K562@0.973595,MCF7@2.14932,NHEK@0.575959,NHLF@0.388539,SKNSHRA@1.92313, 0 0 0 0 ENSG00000213742.2 ENST00000428254.1 chr20:25604793-25654544 6 811 48930 exonic 1.67 0 0,1,1 1 0,0,0 0 0 17.36 0 0.354383813611281 20.849 0 6.27169425710198 27.548 0 0 chimp,human,macaque,marmoset,orangutan, antisense antisense A549@2.41577,AG04450@0.8102,BJ@1.17272,GM12878@0.976248,H1HESC@1.51865,HELAS3@2.44548,HEPG2@2.13992,HMEC@0.311067,HSMM@0.299195,HUVEC@0.353996,K562@0.973595,MCF7@2.14932,NHEK@0.575959,NHLF@0.388539,SKNSHRA@1.92313, 0 0 0 0 ENSG00000213742.2 ENST00000420803.1 chr20:25604869-25650980 5 775 45328 intergenic 1.57 0 0,1,0 1 0,0,0 0 0 17.36 22.3741935483871 0 20.849 130.952258064516 4.51676667843276 27.548 0 0 chimp,human,macaque,marmoset,orangutan,rabbit, antisense antisense A549@2.41577,AG04450@0.8102,BJ@1.17272,GM12878@0.976248,H1HESC@1.51865,HELAS3@2.44548,HEPG2@2.13992,HMEC@0.311067,HSMM@0.299195,HUVEC@0.353996,K562@0.973595,MCF7@2.14932,NHEK@0.575959,NHLF@0.388539,SKNSHRA@1.92313, 0 0 0 0 ENSG00000213742.2 ENST00000421829.1 chr20:25612846-25655538 5 476 42208 exonic -4.80 0 0,0,1 0 0,0,0 0 0 0 0 0.410822592873389 0 6.9327731092437 7.65788476118272 0 0 0 chimp,human,macaque,marmoset,orangutan, antisense antisense A549@2.41577,AG04450@0.8102,BJ@1.17272,GM12878@0.976248,H1HESC@1.51865,HELAS3@2.44548,HEPG2@2.13992,HMEC@0.311067,HSMM@0.299195,HUVEC@0.353996,K562@0.973595,MCF7@2.14932,NHEK@0.575959,NHLF@0.388539,SKNSHRA@1.92313, 0 0 0 0 ENSG00000226465.1 ENST00000376445.3 chr20:25731854-25733397 2 318 1223 intergenic 0.44 1 1,1,1 1 0,0,0 0 0 0 0 0 0 370.471698113208 16.13654946852 0 0 0 chimp,cow,human,mouse,orangutan,pig, antisense antisense A549@0.4976,AG04450@0.022079,BJ@0.0608925,GM12878@0.157917,H1HESC@0.175702,HELAS3@0.0958695,HEPG2@0.784554,HMEC@0.051183,HSMM@0.01286,HUVEC@0,K562@0.078135,MCF7@0.632512,NHEK@0.139443,NHLF@0.042547,SKNSHRA@0.400077, 0 0 0 0 ENSG00000238157.1 ENST00000424021.1 chr20:25844905-25848315 2 1691 1717 intronic -1.91 0 0,0,0 0 0,0,0 0 0 0 0 0 0 0 0 0 0 0 chimp,human,macaque,marmoset,orangutan, lincRNA lincRNA A549@0.06333,AG04450@0,BJ@0.038419,GM12878@0,H1HESC@0,HELAS3@0.020379,HEPG2@0.009974,HMEC@0,HSMM@0.115644,HUVEC@0,K562@0.0128795,MCF7@0.112702,NHEK@0.016924,NHLF@0.0022795,SKNSHRA@0.127216, 0 0 0 0 ENSG00000226203.1 ENST00000449316.1 chr20:25936448-25949924 4 4600 8870 intergenic 0.01 1 0,0,0 0 0,0,0 0 0 0 0 0 0 0 0 9.287 0 0 chimp,human,orangutan, lincRNA lincRNA A549@0,AG04450@0,BJ@0.001051,GM12878@0.0008755,H1HESC@0.0018025,HELAS3@0.0009815,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0.001293,K562@0.001513,MCF7@0,NHEK@0.000277333,NHLF@0,SKNSHRA@0.0009855, 0 0 0 0 ENSG00000225160.1 ENST00000437782.1 chr20:25982172-25982935 2 441 320 intergenic -3.27 0 0,0,0 0 0,0,0 0 0 0 0 0 0 0 0 0 0 0 chimp,human,marmoset,orangutan, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000231081.1 ENST00000448580.1 chr20:25989427-25991167 2 540 1198 intergenic -2.73 0 0,0,0 0 0,0,0 0 0 0 0 0 0 0 0 0 0 0 chimp,human,orangutan, lincRNA lincRNA A549@0.004005,AG04450@0,BJ@0.0132025,GM12878@0.043247,H1HESC@0,HELAS3@0.029508,HEPG2@0.114336,HMEC@0,HSMM@0,HUVEC@0.0257935,K562@0.004284,MCF7@0,NHEK@0.00471033,NHLF@0,SKNSHRA@0.0144545, 0 0 0 0 ENSG00000230440.1 ENST00000416563.1 chr20:26113523-26114834 2 269 1040 intergenic 3.02 0 0,0,1 0 0,0,0 0 0 0 0 0 0 0 0 0 0 0 chimp,human,macaque,marmoset,orangutan, lincRNA lincRNA A549@0.0101925,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0.129698, 0 0 0 0 ENSG00000227195.1 ENST00000432499.1 chr20:26167655-26189527 5 1124 20740 intergenic -2.67 1 0,0,0 0 0,0,0 0 0 0 218.608540925267 4.86340405014465 17.772 238.653024911032 5.53794599807136 20.067 0 0 cat,chimp,dog,elephant,guinea_pig,horse,human,macaque,marmoset,mouse,opossum,orangutan,panda,pig,rabbit,rat, lincRNA processed_transcript A549@1.37159,AG04450@0.560413,BJ@0.970975,GM12878@0.257607,H1HESC@0.378879,HELAS3@0.410723,HEPG2@0.279201,HMEC@0.726211,HSMM@0.23732,HUVEC@0.198925,K562@0.159824,MCF7@0.220006,NHEK@0.416078,NHLF@0.285288,SKNSHRA@0.517788, 0 0 0 0 ENSG00000227195.1 ENST00000427348.1 chr20:26167655-26189869 5 1208 20998 intergenic -2.67 1 0,1,0 0 0,0,0 0 0 0 198.192052980132 5.18939899038004 16.272 216.686258278146 5.86722545004286 18.522 0 0 cat,chimp,dog,guinea_pig,horse,human,macaque,marmoset,opossum,orangutan,panda,rabbit,rat, lincRNA processed_transcript A549@1.37159,AG04450@0.560413,BJ@0.970975,GM12878@0.257607,H1HESC@0.378879,HELAS3@0.410723,HEPG2@0.279201,HMEC@0.726211,HSMM@0.23732,HUVEC@0.198925,K562@0.159824,MCF7@0.220006,NHEK@0.416078,NHLF@0.285288,SKNSHRA@0.517788, 0 0 0 0 ENSG00000238129.1 ENST00000416638.1 chr20:26171625-26174582 2 624 2331 intergenic -19.70 0 0,0,1 0 0,0,0 0 0 0 0 0 0 0 0 0 0 0 chimp,human,macaque,marmoset,orangutan, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0.103543, 0 0 0 0 ENSG00000205611.3 ENST00000380888.3 chr20:29513582-29521213 2 3326 4303 intergenic 5.88 0 0,0,0 0 0,0,0 0 0 0 0 0 376.882 1.68039687312087 0 450.532 0 0 chimp,human,orangutan, lincRNA lincRNA A549@0.0046245,AG04450@0.001938,BJ@0.0029085,GM12878@0.005625,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0.011073,HSMM@0.0056735,HUVEC@0,K562@0.159519,MCF7@0,NHEK@0.00237833,NHLF@0.0121755,SKNSHRA@0.0471035, 0 0 0 0 ENSG00000225490.1 ENST00000454331.1 chr20:29521637-29522987 2 551 797 intergenic -0.46 0 0,0,1 0 0,0,0 0 0 0 317.281306715064 11.1242158092848 80.054 324.036297640653 11.5018820577164 81.027 0 0 cat,chimp,cow,dog,elephant,guinea_pig,horse,human,macaque,marmoset,mouse,orangutan,panda,pig,rabbit,rat, lincRNA lincRNA A549@0,AG04450@0.0699305,BJ@0.008752,GM12878@0.0072905,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0.0214335,K562@1.00274,MCF7@0,NHEK@0.007083,NHLF@0.059316,SKNSHRA@0.020521, 0 0 0 0 ENSG00000231934.1 ENST00000445151.1 chr20:29558488-29570363 4 715 11154 intergenic 1.51 0 0,1,1 0 0,0,0 0 0 0 38.5048951048951 22.7138246369016 93.438 38.2657342657343 23.8333333333333 92.006 0 0 chimp,cow,human,macaque,marmoset,orangutan,rabbit, antisense antisense A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000231934.1 ENST00000432067.1 chr20:29565756-29596406 4 456 30188 intergenic -2.68 1 0,0,1 0 0,0,0 0 0 0 0 11.0975221942494 0 0 11.182191599311 0 0 0 chimp,human,orangutan, antisense antisense A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000223346.1 ENST00000446917.1 chr20:29638246-29641792 2 938 2606 intergenic -1.53 0 0,0,1 0 0,0,0 0 0 0 0 0 0 24.8859275053305 0 120.093 0 0 cat,chimp,cow,dog,elephant,guinea_pig,horse,human,macaque,marmoset,orangutan,panda,pig,rabbit, lincRNA lincRNA A549@0.474156,AG04450@0.272966,BJ@0.434949,GM12878@0.859465,H1HESC@0,HELAS3@0.0804615,HEPG2@0.354911,HMEC@0.385592,HSMM@0.139555,HUVEC@0.376966,K562@2.08181,MCF7@0.372452,NHEK@0.315508,NHLF@0.107108,SKNSHRA@1.25845, 0 0 0 0 ENSG00000204547.5 ENST00000433453.1 chr20:30009239-30016983 3 496 7244 intergenic 1.49 1 0,0,1 0 0,0,0 0 0 0 20.7157258064516 1.39688017669796 0 24.6310483870968 12.0379624516841 0 0 0 cat,chimp,horse,human,macaque,marmoset,mouse,orangutan, antisense antisense A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000204547.5 ENST00000545884.1 chr20:30009242-30011670 2 296 2130 intergenic -3.55 1 0,0,1 0 0,0,0 0 0 0 42.5101351351351 0.572769953051643 6.286 65.3310810810811 0.580281690140845 6.689 0 0 cat,chimp,cow,dog,elephant,guinea_pig,horse,human,macaque,marmoset,mouse,orangutan,panda,pig,rabbit, antisense antisense A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000233354.1 ENST00000435497.1 chr20:30073581-30075377 4 583 1207 intergenic 1.56 0 0,0,0 0 0,0,0 129.67409948542 1.86412593206297 0 131.480274442539 3.95028997514499 13.424 122.530017152659 3.990057995029 16.776 0 0 chimp,human,macaque,marmoset,orangutan, lincRNA non_coding A549@0,AG04450@0.011455,BJ@0.0125825,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0.0035055,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0.009898,SKNSHRA@0.11219, 0 0 0 0 ENSG00000235313.1 ENST00000421894.1 chr20:30150969-30151879 2 354 554 intronic -10.29 0 0,0,1 0 0,0,0 0 0 0 0 0 6.516 0 0 6.444 0 0 chimp,horse,human,macaque,marmoset,orangutan,rat, sense_intronic sense_intronic A549@0.0954495,AG04450@0.027857,BJ@0.059973,GM12878@0.0289975,H1HESC@0.029296,HELAS3@0.331705,HEPG2@0.288154,HMEC@0.036068,HSMM@0.0428315,HUVEC@0.165199,K562@0.068198,MCF7@0.0858915,NHEK@0.0303717,NHLF@0.0134185,SKNSHRA@0.106164, 0 0 0 0 ENSG00000230613.1 ENST00000412178.1 chr20:30155510-30161066 3 486 5066 intronic 0 0 0,1,0 0 0,0,0 97.8456790123457 65.8519542045006 15.327 157.530864197531 115.39242005527 4.27 151.851851851852 106.446900908014 4.256 0 0 chimp,human,macaque,marmoset,orangutan, antisense antisense A549@0.136941,AG04450@0.015761,BJ@0.0098975,GM12878@0.019777,H1HESC@0.179244,HELAS3@0.761174,HEPG2@0.314887,HMEC@0.016747,HSMM@0.0261545,HUVEC@0,K562@0.289102,MCF7@0.274895,NHEK@0.0160203,NHLF@0.0119705,SKNSHRA@0.126955, 0 0 0 0 ENSG00000236559.1 ENST00000412972.1 chr20:30274019-30304628 2 372 30235 intronic 0.74 0 0,0,1 0 0,0,0 56.2768817204301 37.1068959814784 0 0 49.6605920291054 1.275 0 46.1797585579626 1.295 0 0 horse,human,orangutan, antisense antisense A549@0,AG04450@0,BJ@0.0086525,GM12878@0.250279,H1HESC@0,HELAS3@0.0111605,HEPG2@0.0235015,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000226239.1 ENST00000449519.1 chr20:30615556-30619378 2 2011 1809 exonic 7.35 1 0,1,1 0 0,0,0 67.8334162108404 16.7318960751797 8.151 108.88165091994 34.3167495854063 1.673 107.040775733466 35.2791597567717 2.008 0 0 chimp,guinea_pig,human,macaque,marmoset,orangutan, antisense antisense A549@0.0027445,AG04450@0,BJ@0,GM12878@0.007915,H1HESC@0.060147,HELAS3@0.136855,HEPG2@0.259543,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0.0168085, 0 0 0 0 ENSG00000236772.1 ENST00000442179.1 chr20:31037558-31041410 4 982 2864 exonic 12.22 0 0,0,0 0 0,0,0 97.225050916497 80.4584497206704 0 114.320773930754 98.7189245810056 0 121.207739307536 100.680167597765 0 0 0 chimp,human,macaque,marmoset,orangutan, antisense antisense A549@0.0576625,AG04450@0.0906385,BJ@0.06028,GM12878@0.172352,H1HESC@0,HELAS3@0.469476,HEPG2@0.580715,HMEC@0,HSMM@0.065337,HUVEC@0.109009,K562@0.0353975,MCF7@0.562464,NHEK@0.208994,NHLF@0.0344465,SKNSHRA@0.249645, 0 0 0 0 ENSG00000233293.1 ENST00000413983.1 chr20:31148895-31161690 3 466 12325 intronic 1.54 0 0,1,0 1 0,0,0 50.137339055794 9.61298174442191 28.116 92.9463519313305 15.3178093306288 57.023 91.3412017167382 15.6484381338742 56.319 0 0 cat,chimp,cow,dog,elephant,horse,human,macaque,marmoset,orangutan,panda, antisense antisense A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0.0267,HEPG2@0.446017,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000228156.1 ENST00000457213.1 chr20:31169765-31181702 2 368 11567 intronic -1.10 0 0,1,0 0 0,0,0 175.875 128.019106077635 129.453 155.997282608696 171.673986340451 197.428 174.122282608696 132.403388951327 180.454 0 0 chimp,cow,dog,elephant,horse,human,macaque,marmoset,mouse,orangutan,panda,rabbit, processed_transcript processed_transcript A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0.0044405,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000198547.3 ENST00000360785.3 chr20:31220661-31239680 5 3451 15560 intergenic 5.69 1 0,0,0 0 0,0,1 11.6740075340481 2.09151670951157 0 22.7151550275283 2.33348329048843 1.912 22.6250362213851 2.55096401028278 1.944 0 0 chimp,human,macaque,marmoset, lincRNA processed_transcript A549@0.0173385,AG04450@0.0134185,BJ@0.024995,GM12878@0.0183855,H1HESC@0.108788,HELAS3@0.0513545,HEPG2@0.0502395,HMEC@0.00237,HSMM@0.0025095,HUVEC@0.0030905,K562@0.143663,MCF7@0.0026645,NHEK@0.000764,NHLF@0.0394835,SKNSHRA@0.0446395, 0 0 0 0 ENSG00000183566.5 ENST00000375465.3 chr20:31781411-31798268 9 1194 15647 intergenic 9.41 1 0,0,0 0 0,0,0 0 0 0 7.6214405360134 1.54355467501758 1.736 7.89363484087102 1.74046143030613 1.813 0 0 human,marmoset,orangutan, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0.02031,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000183566.5 ENST00000420169.1 chr20:31786015-31792975 5 565 6387 intergenic 0.94 0 0,0,1 0 0,0,0 0 0 0 14.0938053097345 1.6268983873493 0 14.6230088495575 1.67778299671207 0 0 0 cat,human,macaque,marmoset,orangutan, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0.02031,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000224876.1 ENST00000419613.1 chr20:31802726-31804873 2 364 1781 intergenic 1.23 0 0,0,0 0 0,0,0 0 0 5.225 0 5.078607523863 45.926 0 5.1965188096575 47.347 0 0 chimp,horse,human,macaque,marmoset,orangutan, antisense antisense A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000242518.2 ENST00000420264.1 chr20:31938669-31941866 2 543 2652 intergenic -3.21 0 0,0,0 0 0,0,0 0 0 0 2.74033149171271 1.62217194570136 3.822 2.77348066298343 1.73981900452489 3.892 0 0 chimp,cow,human,marmoset,orangutan,pig, processed_transcript processed_transcript A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000229188.1 ENST00000441029.1 chr20:32316737-32319634 2 399 2496 exonic 0.42 0 0,0,0 0 0,0,0 0 0 30.355 0 0 94.525 0 0 103.634 0 0 chimp,human,marmoset, antisense antisense A549@0,AG04450@0.022148,BJ@0,GM12878@0,H1HESC@0.043226,HELAS3@0.0056345,HEPG2@0.017429,HMEC@0,HSMM@0.0056845,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000230753.1 ENST00000423074.1 chr20:32375179-32380833 2 462 5190 intronic -1.38 0 1,1,1 1 0,0,0 0 54.1005780346821 0 21.6926406926407 64.5094412331406 0 29.7987012987013 61.273795761079 0 0 0 chimp,human,macaque,marmoset,panda, antisense antisense A549@0.0050835,AG04450@0.0176335,BJ@0.0321005,GM12878@0,H1HESC@0,HELAS3@0.080474,HEPG2@0.0173915,HMEC@0.006378,HSMM@0.0067555,HUVEC@0.116887,K562@0,MCF7@0.0077005,NHEK@0.00584333,NHLF@0.003039,SKNSHRA@0.0048895, 0 0 0 0 ENSG00000230753.1 ENST00000443171.1 chr20:32375181-32398903 4 638 23078 intronic 1.82 1 0,0,1 0 0,0,0 0 12.9769477424387 180.582 20.2852664576803 16.872215963255 328.084 26.1300940438871 16.6926076783083 265.689 0 0 chimp,cow,dog,horse,human,macaque,marmoset,panda, antisense antisense A549@0.0050835,AG04450@0.0176335,BJ@0.0321005,GM12878@0,H1HESC@0,HELAS3@0.080474,HEPG2@0.0173915,HMEC@0.006378,HSMM@0.0067555,HUVEC@0.116887,K562@0,MCF7@0.0077005,NHEK@0.00584333,NHLF@0.003039,SKNSHRA@0.0048895, 0 0 0 0 ENSG00000230753.1 ENST00000439444.1 chr20:32375253-32398880 4 423 23198 intronic 1.82 1 0,0,1 0 0,0,0 0 12.9098198120528 180.582 16.0709219858156 16.7849383567549 331.369 16.2789598108747 16.6062591602724 268.161 0 0 chimp,cow,dog,elephant,horse,human,macaque,marmoset,orangutan,panda,pig, antisense antisense A549@0.0050835,AG04450@0.0176335,BJ@0.0321005,GM12878@0,H1HESC@0,HELAS3@0.080474,HEPG2@0.0173915,HMEC@0.006378,HSMM@0.0067555,HUVEC@0.116887,K562@0,MCF7@0.0077005,NHEK@0.00584333,NHLF@0.003039,SKNSHRA@0.0048895, 0 0 0 0 ENSG00000228265.1 ENST00000432859.1 chr20:32570858-32580930 2 608 9462 intergenic 0.50 0 1,1,1 1 0,0,0 0 4.46417247939125 19.78 0 8.55009511731135 98.405 0 14.3053265694356 92.23 0 0 chimp,dog,horse,human,macaque,marmoset,orangutan,panda, lincRNA lincRNA A549@1.607,AG04450@0.678307,BJ@0.926614,GM12878@2.60583,H1HESC@1.79608,HELAS3@2.3624,HEPG2@2.19336,HMEC@1.30966,HSMM@0.703658,HUVEC@0.558391,K562@1.37913,MCF7@1.13673,NHEK@0.867409,NHLF@0.544443,SKNSHRA@1.44863, 0 0 0 0 ENSG00000228265.1 ENST00000440595.1 chr20:32580294-32582161 3 657 1206 intronic -3.48 0 1,1,1 0 0,0,0 0 16.4013266998342 10.755 21.7229832572298 90.2603648424544 60.615 25.0791476407915 87.2893864013267 60.484 0 0 chimp,cow,elephant,human,macaque,marmoset,orangutan,panda,pig, lincRNA lincRNA A549@1.607,AG04450@0.678307,BJ@0.926614,GM12878@2.60583,H1HESC@1.79608,HELAS3@2.3624,HEPG2@2.19336,HMEC@1.30966,HSMM@0.703658,HUVEC@0.558391,K562@1.37913,MCF7@1.13673,NHEK@0.867409,NHLF@0.544443,SKNSHRA@1.44863, 0 0 0 0 ENSG00000228265.1 ENST00000419662.1 chr20:32580317-32582163 2 546 1298 intronic -3.48 0 1,1,1 0 0,0,0 0 15.2388289676425 10.755 24.8260073260073 83.8628659476117 60.615 28.7545787545788 81.1024653312789 60.484 0 0 cat,chimp,cow,dog,elephant,human,macaque,marmoset,orangutan,pig, lincRNA lincRNA A549@1.607,AG04450@0.678307,BJ@0.926614,GM12878@2.60583,H1HESC@1.79608,HELAS3@2.3624,HEPG2@2.19336,HMEC@1.30966,HSMM@0.703658,HUVEC@0.558391,K562@1.37913,MCF7@1.13673,NHEK@0.867409,NHLF@0.544443,SKNSHRA@1.44863, 0 0 0 0 ENSG00000228386.1 ENST00000451556.1 chr20:32602775-32605555 3 870 1906 intronic 1.40 0 0,0,1 0 0,0,0 45.8103448275862 72.2932843651626 65.28 60.1275862068966 63.0041972717733 120.561 70.051724137931 68.3725078698846 134.413 0 0 chimp,elephant,guinea_pig,horse,human,macaque,marmoset,orangutan,panda, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0.0095625,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0.0167725,MCF7@0,NHEK@0.00892633,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000229472.1 ENST00000434926.1 chr20:32668955-32669754 2 228 569 intergenic 0 0 0,0,0 0 0,0,0 0 0 20.315 0 0 40.762 0 0 41.847 0 0 chimp,horse,human,macaque,orangutan,panda, antisense antisense A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0.054536,HELAS3@0.022769,HEPG2@0,HMEC@0.024145,HSMM@0,HUVEC@0.027768,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0.0257665, 0 0 0 0 ENSG00000236388.1 ENST00000454205.1 chr20:33029397-33029830 2 297 134 intronic 0 0 0,0,0 0 0,0,0 0 0 48.087 0 0 64.692 0 0 58.397 0 0 chimp,human,macaque,marmoset,orangutan, antisense antisense A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000231795.1 ENST00000418598.1 chr20:33038735-33042357 2 206 3414 intronic 0 0 0,1,0 0 0,0,0 0 0 0 0 11.7275922671353 0 28.3106796116505 13.9765670767428 0 0 0 cat,chimp,horse,human,macaque,marmoset,orangutan, sense_intronic sense_intronic A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0.0154323,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000225065.1 ENST00000434040.1 chr20:33284722-33302432 3 516 17190 encompassing 3.41 1 0,0,0 0 0,0,0 0 50.7539848749273 363.573 16.8643410852713 80.1596276905177 405.225 24.3391472868217 75.1143688190809 333.254 0 0 chimp,horse,human,macaque,orangutan, antisense antisense A549@0,AG04450@0,BJ@0,GM12878@0.0112695,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0.015858,HUVEC@0.0187395,K562@0,MCF7@0.003874,NHEK@0,NHLF@0.0074775,SKNSHRA@0.030631, 0 0 0 0 ENSG00000126005.9 ENST00000435366.1 chr20:33864148-33865830 3 1512 166 exonic 17.78 1 1,1,1 1 0,0,0 172.213624338624 0 27.28 215.632936507937 16.4638554216867 7.088 203.037037037037 18.0542168674699 7.28 0 0 cat,chimp,cow,dog,elephant,horse,human,macaque,orangutan,panda, processed_transcript processed_transcript A549@4.58585,AG04450@11.645,BJ@14.6346,GM12878@7.30843,H1HESC@11.4697,HELAS3@5.13896,HEPG2@4.75115,HMEC@12.6613,HSMM@14.8299,HUVEC@11.1775,K562@3.44747,MCF7@2.78188,NHEK@10.6578,NHLF@18.9057,SKNSHRA@17.1463, 0 0 0 0 ENSG00000235214.1 ENST00000429167.1 chr20:33873054-33873559 2 350 153 exonic 2.86 1 0,1,1 0 0,0,0 0 0 46.508 0 0 76.26 0 0 79.382 0 0 cat,chimp,guinea_pig,horse,human,macaque,marmoset,orangutan,panda,rabbit, antisense non_coding A549@0.103352,AG04450@0.086384,BJ@0.0828985,GM12878@0.171978,H1HESC@0.145658,HELAS3@0.530558,HEPG2@0.373443,HMEC@0.058162,HSMM@0.0434405,HUVEC@0,K562@0.179003,MCF7@0.0637485,NHEK@0.0212437,NHLF@0,SKNSHRA@0.148231, 0 0 0 0 ENSG00000230155.1 ENST00000453914.1 chr20:34064028-34078808 2 598 14180 exonic -5.29 0 1,1,1 0 0,0,0 118.570234113712 13.6135401974612 57.24 138.561872909699 28.3679830747532 108.699 130.285953177258 24.7356135401975 105.754 0 0 cat,chimp,cow,dog,elephant,horse,human,macaque,marmoset,mouse,orangutan,panda,pig,rabbit,rat, antisense antisense A549@0,AG04450@0,BJ@0,GM12878@1.35967,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0.012196,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000230155.1 ENST00000416903.1 chr20:34064199-34069012 3 474 4335 exonic 0.49 1 0,0,1 0 0,0,0 183.495780590717 38.39723183391 0 238.603375527426 61.5298731257209 10.26 211.189873417722 47.6295271049596 10.982 0 0 cat,chimp,cow,dog,elephant,guinea_pig,horse,human,macaque,marmoset,mouse,orangutan,panda,pig,rabbit,rat, antisense antisense A549@0,AG04450@0,BJ@0,GM12878@1.35967,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0.012196,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000230155.1 ENST00000444933.1 chr20:34064199-34078743 3 480 14060 exonic -9.02 1 1,1,1 0 0,0,0 147.71875 13.7297297297297 57.24 172.625 28.6100995732575 108.699 162.314583333333 24.9467283072546 105.754 0 0 cat,chimp,cow,dog,horse,human,macaque,marmoset,mouse,orangutan,panda,pig,rabbit,rat, antisense antisense A549@0,AG04450@0,BJ@0,GM12878@1.35967,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0.012196,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000230155.1 ENST00000416260.1 chr20:34064199-34078745 3 483 14059 exonic 0 1 1,1,1 0 0,0,0 180.076604554865 12.5875240059748 57.24 237.238095238095 26.3328117220286 108.699 210.892339544513 23.222704317519 105.754 0 0 cat,chimp,cow,dog,elephant,guinea_pig,horse,human,macaque,marmoset,mouse,orangutan,panda,pig,rabbit,rat, antisense antisense A549@0,AG04450@0,BJ@0,GM12878@1.35967,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0.012196,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000234139.1 ENST00000430679.1 chr20:34660363-34662831 2 465 2001 intergenic -0.00 0 0,1,0 0 0,0,0 0 0 0 3.83870967741935 4.40829585207396 14.18 3.98924731182796 4.57371314342829 18.956 0 0 chimp,elephant,human,macaque,marmoset,orangutan, lincRNA lincRNA A549@0.0197835,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0.09923,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000234139.1 ENST00000450129.1 chr20:34660600-34673182 3 354 12224 intergenic -1.49 1 0,1,0 0 0,0,0 0 2.04908376963351 0 7.27118644067797 7.80930955497382 13.436 7.54519774011299 46.4719404450262 18.179 0 0 chimp,human,macaque,marmoset,orangutan, lincRNA lincRNA A549@0.0197835,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0.09923,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000237063.1 ENST00000433587.1 chr20:34674174-34676114 2 614 1324 intergenic -5.09 0 0,0,1 0 0,0,0 0 13.0287009063444 0 2.33550488599349 24.3126888217523 0 2.37459283387622 28.0264350453172 0 0 0 chimp,human,macaque,marmoset,orangutan, lincRNA lincRNA A549@0.003524,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0.0151765,HEPG2@0.004428,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0.013351,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000232406.1 ENST00000441208.1 chr20:34738335-34743655 4 2697 2617 intronic 8.23 0 0,0,0 0 0,0,0 34.3418613274008 20.901031715705 97.638 27.7519466073415 74.0045854031334 122.52 30.5024100852799 71.5131830340084 113.432 0 0 chimp,cow,human,orangutan, lincRNA processed_transcript A549@0,AG04450@0.007451,BJ@0.007261,GM12878@0,H1HESC@0.0324185,HELAS3@0.0158735,HEPG2@0.037245,HMEC@0,HSMM@0.0015235,HUVEC@0,K562@0,MCF7@0.024749,NHEK@0.00315,NHLF@0.0014285,SKNSHRA@0.015048, 0 0 0 0 ENSG00000232907.1 ENST00000439595.1 chr20:35136563-35201678 5 744 64363 intronic 2.06 0 0,1,0 1 0,0,0 0 14.5274769665802 212.626 7.75134408602151 20.5182169880211 278.472 55.491935483871 39.8503798766372 284.883 0 0 chimp,human, antisense antisense A549@0.015822,AG04450@0.050147,BJ@0.015159,GM12878@0.79261,H1HESC@0.392885,HELAS3@0.545874,HEPG2@0.91527,HMEC@0,HSMM@0.006087,HUVEC@0.011104,K562@0.0847675,MCF7@0.052275,NHEK@0,NHLF@0.0032905,SKNSHRA@0.015361, 0 0 0 0 ENSG00000232907.1 ENST00000433238.1 chr20:35141012-35154533 3 590 12927 exonic 6.25 0 0,0,0 0 0,0,0 314.305084745763 3.33905778602924 188.597 338.216949152542 9.15626208710451 210.862 339.203389830509 10.9185425852866 204.864 0 0 chimp,cow,dog,elephant,guinea_pig,horse,human,macaque,marmoset,mouse,orangutan,panda,pig,rabbit,rat, antisense antisense A549@0.015822,AG04450@0.050147,BJ@0.015159,GM12878@0.79261,H1HESC@0.392885,HELAS3@0.545874,HEPG2@0.91527,HMEC@0,HSMM@0.006087,HUVEC@0.011104,K562@0.0847675,MCF7@0.052275,NHEK@0,NHLF@0.0032905,SKNSHRA@0.015361, 0 0 0 0 ENSG00000232907.1 ENST00000425233.1 chr20:35153904-35201387 4 439 47038 exonic 5.36 0 0,0,0 0 0,0,0 44.3189066059225 18.5364598834984 129.25 51.74715261959 25.0619499128364 202.234 21.5808656036446 24.4248905140525 188.435 0 0 chimp,human,macaque,marmoset,orangutan, antisense antisense A549@0.015822,AG04450@0.050147,BJ@0.015159,GM12878@0.79261,H1HESC@0.392885,HELAS3@0.545874,HEPG2@0.91527,HMEC@0,HSMM@0.006087,HUVEC@0.011104,K562@0.0847675,MCF7@0.052275,NHEK@0,NHLF@0.0032905,SKNSHRA@0.015361, 0 0 0 0 ENSG00000235167.1 ENST00000411780.1 chr20:36120874-36137633 3 711 16044 intergenic 1.53 0 0,0,1 0 0,0,0 0 16.2315507354774 0 5.9690576652602 20.7786711543256 9.101 11.7735583684951 23.9337447020693 9.234 0 0 cow,elephant,horse,human,macaque,marmoset,orangutan,panda, processed_transcript processed_transcript A549@0.087472,AG04450@0.110973,BJ@0.158115,GM12878@0.059032,H1HESC@0.145547,HELAS3@0.148402,HEPG2@0.287102,HMEC@0.066852,HSMM@0.136144,HUVEC@0.23891,K562@0.070103,MCF7@0.0975135,NHEK@0.269592,NHLF@0.095356,SKNSHRA@0.222824, 0 0 0 0 ENSG00000235167.1 ENST00000447625.1 chr20:36120936-36124164 2 592 2634 intergenic 1.53 0 0,0,0 0 0,0,0 0 0 0 2.4222972972973 0 5.24 9.3277027027027 0.95292331055429 5.426 0 0 human,macaque,marmoset,orangutan, processed_transcript processed_transcript A549@0.087472,AG04450@0.110973,BJ@0.158115,GM12878@0.059032,H1HESC@0.145547,HELAS3@0.148402,HEPG2@0.287102,HMEC@0.066852,HSMM@0.136144,HUVEC@0.23891,K562@0.070103,MCF7@0.0975135,NHEK@0.269592,NHLF@0.095356,SKNSHRA@0.222824, 0 0 0 0 ENSG00000225759.1 ENST00000457816.1 chr20:36247700-36251521 3 540 3277 intergenic -11.35 0 0,0,0 0 0,0,0 0 0 0 0 0 0 0 0.815685077815075 0 0 0 chimp,human,macaque,marmoset,orangutan, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000204117.1 ENST00000373508.1 chr20:36305312-36311636 4 2108 4210 intergenic 7.86 0 0,0,1 0 0,0,0 31.4544592030361 51.1377672209026 0 38.253320683112 54.6624703087886 7.725 33.6456356736243 51.6748218527316 7.825 0 0 chimp,human,macaque,marmoset,orangutan, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0.019968,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000206249.3 ENST00000437016.1 chr20:36916733-36954938 3 803 37398 exonic 1.18 0 0,0,0 0 0,0,0 0 1.25635060698433 0 15.9115815691158 5.49625648430397 0 16.8256537982565 5.84175624364939 0 0 0 chimp,human,macaque,marmoset,orangutan, antisense antisense A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0.002881,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000224635.1 ENST00000422519.1 chr20:37034658-37045444 2 2002 8782 intergenic 9.17 1 0,0,1 0 0,0,0 0 11.6669323616488 0 0 9.10419038943293 0 1.33516483516484 9.74083352311546 0 0 0 chimp,human,macaque,orangutan, lincRNA lincRNA A549@0.559485,AG04450@0.060044,BJ@0.223629,GM12878@0.326999,H1HESC@0.202817,HELAS3@0.697288,HEPG2@0.477472,HMEC@0.059254,HSMM@0.200131,HUVEC@0.184966,K562@0.383933,MCF7@0.449383,NHEK@0.17373,NHLF@0.033829,SKNSHRA@0.323479, 0 0 0 0 ENSG00000196756.5 ENST00000423536.1 chr20:37049235-37059709 4 513 9955 intergenic 4.69 1 0,0,1 0 0,1,0 0 0 0 49.4970760233918 9.74977398292315 0 54.5185185185185 13.4671019588147 0 0 0 cat,chimp,dog,horse,human,macaque,orangutan,panda, lincRNA processed_transcript A549@28.0162,AG04450@4.40062,BJ@8.91992,GM12878@12.0976,H1HESC@18.4335,HELAS3@18.1053,HEPG2@22.0774,HMEC@8.05993,HSMM@12.4986,HUVEC@9.40904,K562@46.5765,MCF7@12.4687,NHEK@7.37969,NHLF@7.58934,SKNSHRA@5.91399, 0 0 0 0 ENSG00000196756.5 ENST00000436764.1 chr20:37049235-37063976 7 966 13763 intergenic 4.69 1 1,1,1 1 0,1,0 0 1.96018309961491 0 26.2857142857143 7.87488192981182 4.203 28.952380952381 11.9440528954443 4.224 0 1 chimp,human,macaque,orangutan, lincRNA processed_transcript A549@28.0162,AG04450@4.40062,BJ@8.91992,GM12878@12.0976,H1HESC@18.4335,HELAS3@18.1053,HEPG2@22.0774,HMEC@8.05993,HSMM@12.4986,HUVEC@9.40904,K562@46.5765,MCF7@12.4687,NHEK@7.37969,NHLF@7.58934,SKNSHRA@5.91399, 0 0 0 0 ENSG00000196756.5 ENST00000449469.1 chr20:37049239-37057973 4 2134 6594 intergenic 4.69 1 0,0,1 0 0,1,0 0 0 0 11.8987816307404 11.3895966029724 21.956 13.1059044048735 14.7663026994237 36.696 0 1 chimp,human,macaque,orangutan, lincRNA processed_transcript A549@28.0162,AG04450@4.40062,BJ@8.91992,GM12878@12.0976,H1HESC@18.4335,HELAS3@18.1053,HEPG2@22.0774,HMEC@8.05993,HSMM@12.4986,HUVEC@9.40904,K562@46.5765,MCF7@12.4687,NHEK@7.37969,NHLF@7.58934,SKNSHRA@5.91399, 0 0 0 0 ENSG00000196756.5 ENST00000414142.1 chr20:37049240-37063916 8 2094 12568 intergenic 4.69 1 1,1,1 1 0,1,0 0 2.14656269891789 0 168.99188156638 7.58855824315722 4.203 185.561127029608 12.035407383832 4.224 0 1 chimp,human,macaque,orangutan, lincRNA retained_intron A549@28.0162,AG04450@4.40062,BJ@8.91992,GM12878@12.0976,H1HESC@18.4335,HELAS3@18.1053,HEPG2@22.0774,HMEC@8.05993,HSMM@12.4986,HUVEC@9.40904,K562@46.5765,MCF7@12.4687,NHEK@7.37969,NHLF@7.58934,SKNSHRA@5.91399, 0 0 0 0 ENSG00000196756.5 ENST00000417578.1 chr20:37049240-37063920 7 873 13795 intergenic 4.69 1 1,1,1 1 0,1,0 0 1.95563610003624 0 29.085910652921 7.85661471547662 4.203 32.0366552119129 11.9163465023559 4.224 0 1 chimp,human,macaque,orangutan, lincRNA processed_transcript A549@28.0162,AG04450@4.40062,BJ@8.91992,GM12878@12.0976,H1HESC@18.4335,HELAS3@18.1053,HEPG2@22.0774,HMEC@8.05993,HSMM@12.4986,HUVEC@9.40904,K562@46.5765,MCF7@12.4687,NHEK@7.37969,NHLF@7.58934,SKNSHRA@5.91399, 0 0 0 0 ENSG00000196756.5 ENST00000435718.1 chr20:37049532-37059692 4 257 9897 intergenic 0 0 0,0,0 0 0,1,0 0 0 0 0 9.83479842376478 0 0 13.5767404263918 0 1 1 chimp,human,macaque,marmoset,orangutan, lincRNA processed_transcript A549@28.0162,AG04450@4.40062,BJ@8.91992,GM12878@12.0976,H1HESC@18.4335,HELAS3@18.1053,HEPG2@22.0774,HMEC@8.05993,HSMM@12.4986,HUVEC@9.40904,K562@46.5765,MCF7@12.4687,NHEK@7.37969,NHLF@7.58934,SKNSHRA@5.91399, 0 0 0 0 ENSG00000196756.5 ENST00000413755.1 chr20:37050839-37063996 5 643 12506 intergenic 1.34 0 0,1,0 1 0,1,0 0 2.15720454181993 0 0 7.493762993763 4.203 0 11.9249160403007 4.224 1 1 chimp,human,macaque,marmoset,orangutan, lincRNA processed_transcript A549@28.0162,AG04450@4.40062,BJ@8.91992,GM12878@12.0976,H1HESC@18.4335,HELAS3@18.1053,HEPG2@22.0774,HMEC@8.05993,HSMM@12.4986,HUVEC@9.40904,K562@46.5765,MCF7@12.4687,NHEK@7.37969,NHLF@7.58934,SKNSHRA@5.91399, 0 0 0 0 ENSG00000196756.5 ENST00000456953.1 chr20:37055103-37063976 4 542 8325 intergenic 0 0 0,1,0 1 0,1,0 0 3.2406006006006 0 0 6.40168168168168 4.203 0 11.6293093093093 4.224 1 1 chimp,human,macaque,marmoset,orangutan, lincRNA processed_transcript A549@28.0162,AG04450@4.40062,BJ@8.91992,GM12878@12.0976,H1HESC@18.4335,HELAS3@18.1053,HEPG2@22.0774,HMEC@8.05993,HSMM@12.4986,HUVEC@9.40904,K562@46.5765,MCF7@12.4687,NHEK@7.37969,NHLF@7.58934,SKNSHRA@5.91399, 0 0 0 0 ENSG00000196756.5 ENST00000424235.1 chr20:37059423-37063977 3 761 3789 intergenic -4.73 0 0,1,0 1 0,1,0 0 7.12008445500132 0 0 2.98838743731855 4.203 0 8.00237529691211 4.224 0 0 cat,chimp,guinea_pig,horse,human,macaque,marmoset,orangutan, lincRNA retained_intron A549@28.0162,AG04450@4.40062,BJ@8.91992,GM12878@12.0976,H1HESC@18.4335,HELAS3@18.1053,HEPG2@22.0774,HMEC@8.05993,HSMM@12.4986,HUVEC@9.40904,K562@46.5765,MCF7@12.4687,NHEK@7.37969,NHLF@7.58934,SKNSHRA@5.91399, 0 0 0 0 ENSG00000174365.14 ENST00000453698.1 chr20:37075221-37079564 4 1318 3019 intergenic 4.33 1 1,1,1 1 0,0,0 0 15.4017886717456 0 4.66160849772382 19.0076184166943 3.472 6.13277693474962 24.585293143425 3.626 0 0 chimp,dog,horse,human,macaque,marmoset,orangutan,panda, lincRNA processed_transcript A549@4.08345,AG04450@1.79032,BJ@2.73232,GM12878@2.51815,H1HESC@3.99498,HELAS3@6.15609,HEPG2@5.98913,HMEC@1.67147,HSMM@2.14717,HUVEC@2.83934,K562@2.87345,MCF7@2.25275,NHEK@2.66528,NHLF@1.97669,SKNSHRA@5.3545, 0 0 0 0 ENSG00000174365.14 ENST00000400436.2 chr20:37075297-37079564 3 2649 1614 intergenic 2.20 1 1,1,1 1 0,0,0 0 28.8091697645601 0 4.41713854284636 30.6443618339529 5.839 9.58588146470366 33.7843866171004 6.011 0 0 chimp,cow,horse,human,marmoset,orangutan, lincRNA processed_transcript A549@4.08345,AG04450@1.79032,BJ@2.73232,GM12878@2.51815,H1HESC@3.99498,HELAS3@6.15609,HEPG2@5.98913,HMEC@1.67147,HSMM@2.14717,HUVEC@2.83934,K562@2.87345,MCF7@2.25275,NHEK@2.66528,NHLF@1.97669,SKNSHRA@5.3545, 0 0 0 0 ENSG00000174365.14 ENST00000483342.1 chr20:37075328-37079564 4 1505 2725 intergenic 2.20 1 1,1,1 1 0,0,0 0 17.0634862385321 0 2.50963455149502 21.0583486238532 5.839 3.78604651162791 27.2377981651376 6.011 0 0 cat,chimp,horse,human,macaque,marmoset,orangutan,panda, lincRNA processed_transcript A549@4.08345,AG04450@1.79032,BJ@2.73232,GM12878@2.51815,H1HESC@3.99498,HELAS3@6.15609,HEPG2@5.98913,HMEC@1.67147,HSMM@2.14717,HUVEC@2.83934,K562@2.87345,MCF7@2.25275,NHEK@2.66528,NHLF@1.97669,SKNSHRA@5.3545, 0 0 0 0 ENSG00000174365.14 ENST00000421599.1 chr20:37075334-37079564 5 1041 3181 intergenic 4.33 1 1,1,1 1 0,0,0 0 14.6174159069475 0 3.62824207492795 18.0396101854763 5.839 5.47358309317963 23.3332285444829 6.011 0 0 chimp,dog,horse,human,macaque,marmoset,orangutan,panda,rabbit, lincRNA processed_transcript A549@4.08345,AG04450@1.79032,BJ@2.73232,GM12878@2.51815,H1HESC@3.99498,HELAS3@6.15609,HEPG2@5.98913,HMEC@1.67147,HSMM@2.14717,HUVEC@2.83934,K562@2.87345,MCF7@2.25275,NHEK@2.66528,NHLF@1.97669,SKNSHRA@5.3545, 0 0 0 0 ENSG00000174365.14 ENST00000449351.1 chr20:37075344-37079564 5 949 3263 intergenic 1.52 1 1,1,1 1 0,0,0 0 14.2500766166105 0 3.9799789251844 17.5862703034018 5.839 6.00421496311907 22.7468587189703 6.011 0 0 chimp,human,macaque,marmoset,orangutan, lincRNA processed_transcript A549@4.08345,AG04450@1.79032,BJ@2.73232,GM12878@2.51815,H1HESC@3.99498,HELAS3@6.15609,HEPG2@5.98913,HMEC@1.67147,HSMM@2.14717,HUVEC@2.83934,K562@2.87345,MCF7@2.25275,NHEK@2.66528,NHLF@1.97669,SKNSHRA@5.3545, 0 0 0 0 ENSG00000174365.14 ENST00000420006.1 chr20:37075353-37079500 5 715 3424 intergenic 4.33 1 1,1,1 1 0,0,0 0 13.580023364486 0 3.2013986013986 16.7593457943925 5.839 3.26013986013986 21.6772780373832 6.011 0 0 cat,chimp,cow,horse,human,macaque,marmoset,orangutan,panda,rabbit, lincRNA processed_transcript A549@4.08345,AG04450@1.79032,BJ@2.73232,GM12878@2.51815,H1HESC@3.99498,HELAS3@6.15609,HEPG2@5.98913,HMEC@1.67147,HSMM@2.14717,HUVEC@2.83934,K562@2.87345,MCF7@2.25275,NHEK@2.66528,NHLF@1.97669,SKNSHRA@5.3545, 0 0 0 0 ENSG00000174365.14 ENST00000359074.4 chr20:37075353-37079564 5 1026 3177 intergenic 4.33 1 1,1,1 1 0,0,0 0 14.6358199559333 0 3.6812865497076 18.0623229461756 5.839 5.55360623781676 23.3626062322946 6.011 0 0 chimp,dog,horse,human,macaque,marmoset,orangutan,rabbit, lincRNA processed_transcript A549@4.08345,AG04450@1.79032,BJ@2.73232,GM12878@2.51815,H1HESC@3.99498,HELAS3@6.15609,HEPG2@5.98913,HMEC@1.67147,HSMM@2.14717,HUVEC@2.83934,K562@2.87345,MCF7@2.25275,NHEK@2.66528,NHLF@1.97669,SKNSHRA@5.3545, 0 0 0 0 ENSG00000174365.14 ENST00000440918.1 chr20:37075359-37079006 5 551 3088 intergenic -1.10 0 0,1,1 1 0,0,0 0 15.0576424870466 0 4.15426497277677 18.5829015544041 5.839 9.83303085299456 22.9251943005181 6.011 0 0 chimp,human,macaque,marmoset,orangutan,rabbit, lincRNA processed_transcript A549@4.08345,AG04450@1.79032,BJ@2.73232,GM12878@2.51815,H1HESC@3.99498,HELAS3@6.15609,HEPG2@5.98913,HMEC@1.67147,HSMM@2.14717,HUVEC@2.83934,K562@2.87345,MCF7@2.25275,NHEK@2.66528,NHLF@1.97669,SKNSHRA@5.3545, 0 0 0 0 ENSG00000174365.14 ENST00000432153.1 chr20:37075367-37079564 6 1175 3012 intergenic 4.33 1 1,1,1 1 0,0,0 0 15.437583001328 0 3.21446808510638 19.0517928286853 5.839 7.47659574468085 23.5036520584329 6.011 0 0 chimp,human,macaque,marmoset,orangutan,rabbit, lincRNA processed_transcript A549@4.08345,AG04450@1.79032,BJ@2.73232,GM12878@2.51815,H1HESC@3.99498,HELAS3@6.15609,HEPG2@5.98913,HMEC@1.67147,HSMM@2.14717,HUVEC@2.83934,K562@2.87345,MCF7@2.25275,NHEK@2.66528,NHLF@1.97669,SKNSHRA@5.3545, 0 0 0 0 ENSG00000174365.14 ENST00000437028.1 chr20:37075370-37079564 4 1165 3023 intergenic 4.33 1 1,1,1 1 0,0,0 0 15.3814091961628 0 3.24206008583691 18.9824677472709 5.839 4.89098712446352 24.5527621567979 6.011 0 0 chimp,dog,elephant,human,macaque,marmoset,orangutan,panda, lincRNA processed_transcript A549@4.08345,AG04450@1.79032,BJ@2.73232,GM12878@2.51815,H1HESC@3.99498,HELAS3@6.15609,HEPG2@5.98913,HMEC@1.67147,HSMM@2.14717,HUVEC@2.83934,K562@2.87345,MCF7@2.25275,NHEK@2.66528,NHLF@1.97669,SKNSHRA@5.3545, 0 0 0 0 ENSG00000174365.14 ENST00000434729.1 chr20:37075400-37079564 5 1053 3103 intergenic 4.33 1 1,1,1 1 0,0,0 0 14.9848533677087 0 3.58689458689459 18.4930712213986 5.839 5.41120607787274 23.9197550757332 6.011 0 0 chimp,dog,horse,human,macaque,marmoset,orangutan,panda, lincRNA processed_transcript A549@4.08345,AG04450@1.79032,BJ@2.73232,GM12878@2.51815,H1HESC@3.99498,HELAS3@6.15609,HEPG2@5.98913,HMEC@1.67147,HSMM@2.14717,HUVEC@2.83934,K562@2.87345,MCF7@2.25275,NHEK@2.66528,NHLF@1.97669,SKNSHRA@5.3545, 0 0 0 0 ENSG00000174365.14 ENST00000418383.1 chr20:37075530-37076654 2 817 305 intergenic 2.20 0 0,1,0 1 0,0,0 0 0 0 0 0 2.367 0 0 2.385 0 0 cat,chimp,guinea_pig,horse,human,macaque,marmoset,orangutan,panda,rabbit, lincRNA processed_transcript A549@4.08345,AG04450@1.79032,BJ@2.73232,GM12878@2.51815,H1HESC@3.99498,HELAS3@6.15609,HEPG2@5.98913,HMEC@1.67147,HSMM@2.14717,HUVEC@2.83934,K562@2.87345,MCF7@2.25275,NHEK@2.66528,NHLF@1.97669,SKNSHRA@5.3545, 0 0 0 0 ENSG00000174365.14 ENST00000457218.1 chr20:37075957-37079564 4 876 2725 intergenic 2.20 1 1,1,1 0 0,0,0 0 17.0634862385321 0 4.31164383561644 21.0583486238532 2.367 6.50456621004566 27.2377981651376 2.385 0 0 cat,chimp,guinea_pig,horse,human,macaque,marmoset,orangutan,panda, lincRNA processed_transcript A549@4.08345,AG04450@1.79032,BJ@2.73232,GM12878@2.51815,H1HESC@3.99498,HELAS3@6.15609,HEPG2@5.98913,HMEC@1.67147,HSMM@2.14717,HUVEC@2.83934,K562@2.87345,MCF7@2.25275,NHEK@2.66528,NHLF@1.97669,SKNSHRA@5.3545, 0 0 0 0 ENSG00000174365.14 ENST00000442419.1 chr20:37076181-37079564 3 738 2641 intergenic -7.06 1 0,0,1 0 0,0,0 0 17.6062097690269 0 5.11788617886179 21.7281332828474 2.367 7.72086720867209 28.1041272245362 2.385 0 0 cat,chimp,cow,dog,elephant,human,macaque,marmoset,orangutan,panda, lincRNA processed_transcript A549@4.08345,AG04450@1.79032,BJ@2.73232,GM12878@2.51815,H1HESC@3.99498,HELAS3@6.15609,HEPG2@5.98913,HMEC@1.67147,HSMM@2.14717,HUVEC@2.83934,K562@2.87345,MCF7@2.25275,NHEK@2.66528,NHLF@1.97669,SKNSHRA@5.3545, 0 0 0 0 ENSG00000174365.14 ENST00000444816.1 chr20:37077254-37079564 3 618 1688 intergenic -5.83 1 1,1,1 0 0,0,0 0 27.5462085308057 0 6.11165048543689 29.3009478672986 7.924 9.22006472491909 32.303317535545 19.695 0 0 cat,chimp,cow,guinea_pig,human,macaque,marmoset,orangutan,panda, lincRNA processed_transcript A549@4.08345,AG04450@1.79032,BJ@2.73232,GM12878@2.51815,H1HESC@3.99498,HELAS3@6.15609,HEPG2@5.98913,HMEC@1.67147,HSMM@2.14717,HUVEC@2.83934,K562@2.87345,MCF7@2.25275,NHEK@2.66528,NHLF@1.97669,SKNSHRA@5.3545, 0 0 0 0 ENSG00000230324.1 ENST00000412672.1 chr20:37842420-37853391 4 1514 9451 intergenic 0.71 0 0,0,0 0 0,0,0 0 28.8497513490636 0 3.10700132100396 34.1509893133002 5.785 3.17040951122853 36.7826685006877 6.509 0 0 chimp,cow,dog,horse,human,marmoset,orangutan,rabbit, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0.009246,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000229976.1 ENST00000444436.1 chr20:38414363-38441871 2 478 27028 intergenic -4.98 1 0,0,0 0 0,0,0 106.945606694561 19.8810862808939 87.885 109.65690376569 25.105705194613 108.199 87.7928870292887 25.3983646588723 107.591 0 0 cat,chimp,cow,dog,horse,human,macaque,marmoset,orangutan,panda,rabbit, lincRNA lincRNA A549@0.0057545,AG04450@0,BJ@0,GM12878@0.0232495,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000237767.1 ENST00000432633.1 chr20:38633119-38636887 3 535 3229 intergenic -8.43 0 0,0,0 0 0,0,0 0 58.6320842366058 0 24.0672897196262 67.1477237534841 0 25.2654205607477 66.1951068442242 0 0 0 chimp,cow,horse,human,macaque,marmoset,mouse,orangutan, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000237767.1 ENST00000445606.1 chr20:38633126-38637171 3 728 3313 intergenic 0.69 1 0,0,1 0 0,0,0 0 57.1454874735889 0 28.3791208791209 65.4452158164805 0 30.342032967033 64.5167521883489 0 0 0 cat,chimp,dog,elephant,horse,human,macaque,marmoset,mouse,orangutan,panda,rabbit,rat, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000233415.1 ENST00000423153.1 chr20:38660227-38672531 3 637 11663 intergenic 3.11 1 0,0,0 0 0,0,0 0 2.29169167452628 0 0 7.21632513075538 0 0 9.53133842064649 0 0 0 chimp,human,macaque,marmoset,orangutan, lincRNA lincRNA A549@0.0097005,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000223410.1 ENST00000445278.1 chr20:38749682-38754998 3 423 4889 intergenic -0.20 0 0,0,1 0 0,0,0 2.60047281323877 7.31069748414809 19.84 19.4964539007092 27.1683370832481 42.886 29.4657210401891 27.2127224381264 44.267 0 0 cat,chimp,elephant,horse,human,macaque,marmoset,mouse,orangutan,panda, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000229771.1 ENST00000428495.1 chr20:39326535-39327256 2 271 448 intergenic -1.58 0 0,0,1 0 0,0,0 0 31.4285714285714 0 0 0 0 3.46863468634686 0 0 0 0 cat,chimp,cow,dog,elephant,guinea_pig,horse,human,macaque,marmoset,orangutan,panda,pig, lincRNA lincRNA A549@0.0247075,AG04450@1.1382,BJ@0.035919,GM12878@0.017172,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0.383736,HUVEC@0.0434175,K562@0,MCF7@0,NHEK@0,NHLF@0.523625,SKNSHRA@0.269287, 0 0 0 0 ENSG00000226648.1 ENST00000454626.1 chr20:39726969-39766643 7 1455 38207 exonic 7.25 1 1,1,1 0 0,0,0 94.9134020618557 52.1991519878556 62.43 123.707903780069 62.9109848980553 64.578 124.73058419244 62.9889549035517 47.919 0 0 chimp,horse,human,macaque,marmoset,orangutan,panda,rabbit, antisense antisense A549@0.013914,AG04450@0.062397,BJ@0.042648,GM12878@0.278091,H1HESC@0.291845,HELAS3@0.135936,HEPG2@0.23607,HMEC@0.014004,HSMM@0.032632,HUVEC@0.311668,K562@0.0356695,MCF7@0.171311,NHEK@0.0177753,NHLF@0.027804,SKNSHRA@0.332717, 0 0 0 0 ENSG00000225915.2 ENST00000423733.1 chr20:39809096-39825427 4 494 15831 exonic 2.18 0 0,0,0 0 0,0,0 0 9.74398332385825 0 0 9.71574758385446 0.956 152.085020242915 19.8426504958625 2.673 0 0 chimp,cow,dog,elephant,guinea_pig,horse,human,macaque,marmoset,mouse,orangutan,pig,rabbit,rat, processed_transcript processed_transcript A549@0.011149,AG04450@0,BJ@0.0129965,GM12878@0.006162,H1HESC@0.0149065,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0.0223675,K562@0,MCF7@0.0434585,NHEK@0.0157473,NHLF@0,SKNSHRA@0.035175, 0 0 0 0 ENSG00000225458.1 ENST00000431589.1 chr20:40619780-40692609 2 592 72235 intergenic -2.05 0 0,0,0 0 0,0,0 0 10.2279227521285 89.102 0 17.8071018204471 114.599 5.08783783783784 32.2402021180868 117.3 0 0 cat,chimp,cow,elephant,horse,human,macaque,marmoset,mouse,orangutan,panda,rat, antisense antisense A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0.003826, 0 0 0 0 ENSG00000228959.1 ENST00000412348.1 chr20:40642674-40644118 3 414 1026 intergenic 6.88 1 0,0,0 0 0,0,0 1.24154589371981 0 0 100.828502415459 2.32943469785575 8.293 78.6473429951691 2.44639376218324 8.501 0 0 chimp,guinea_pig,human,macaque,orangutan, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000229042.1 ENST00000457704.1 chr20:41314123-41316285 4 1074 1082 intronic -2.91 0 0,0,1 0 0,0,0 7.78864059590317 0 0 32.8845437616387 0 1.195 33.1247672253259 0 1.215 0 0 chimp,human,macaque,marmoset,orangutan, lincRNA processed_transcript A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000227599.1 ENST00000412519.1 chr20:41597383-41600132 2 1584 1163 intronic 2.69 1 0,0,1 0 0,0,0 10.020202020202 0 0 57.6388888888889 4.98022355975924 1.736 69.790404040404 5.08340498710232 1.757 0 0 cat,chimp,cow,dog,elephant,guinea_pig,horse,human,macaque,marmoset,orangutan,panda,pig, antisense antisense A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0.003347,HEPG2@0,HMEC@0,HSMM@0.0377445,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000233508.1 ENST00000430025.1 chr20:41818862-41830011 2 803 10344 intergenic 0.69 0 0,1,0 0 0,0,0 18.1556662515567 13.3836040216551 99.366 54.9364881693649 24.1681167826759 198.839 66.8592777085928 26.4905259087394 173.723 0 0 chimp,horse,human,orangutan, antisense antisense A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0.026764,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000226143.1 ENST00000442482.1 chr20:42178029-42179589 2 516 1042 exonic -8.77 0 0,1,0 0 0,0,0 155.978682170543 4.63531669865643 21.525 120.156976744186 19.9913627639155 2.104 144.449612403101 17.5969289827255 2.176 0 0 cat,chimp,cow,dog,elephant,guinea_pig,horse,human,macaque,marmoset,mouse,orangutan,panda,pig,rat, antisense antisense A549@0.0298885,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0.016116,HEPG2@0.108073,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000225865.1 ENST00000446932.1 chr20:42418584-42455002 7 2418 33988 intergenic 2.94 0 0,0,0 0 0,0,0 44.5876757650951 11.7365835000588 0 85.2344913151365 14.108655996234 14.219 96.5119933829611 15.6040955631399 16.309 0 0 chimp,cow,human,macaque,marmoset,orangutan, lincRNA lincRNA A549@0.0102405,AG04450@0.0018485,BJ@0.0059875,GM12878@0.0807685,H1HESC@0.0170555,HELAS3@0.0043745,HEPG2@0,HMEC@0.003377,HSMM@0.00188,HUVEC@0,K562@0.0020255,MCF7@0.0757235,NHEK@0.00217267,NHLF@0.006383,SKNSHRA@0.0072435, 0 0 0 0 ENSG00000233277.1 ENST00000428529.1 chr20:42523360-42524108 2 522 224 intergenic -0.85 1 0,1,0 0 0,0,0 41.6896551724138 0 58.617 30.2528735632184 15.4375 58.595 31.6015325670498 15.6875 54.628 0 0 cat,chimp,dog,elephant,horse,human,macaque,marmoset,orangutan,pig, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0.007694,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0.0086595, 0 0 0 0 ENSG00000223891.1 ENST00000439943.1 chr20:42839600-42854667 3 1438 13625 intergenic 1.13 0 1,1,1 1 0,0,0 0 4.52528440366972 0 14.0312934631433 1.17849541284404 74.865 13.1223922114047 1.24491743119266 78.184 0 0 chimp,human,macaque,marmoset,orangutan, lincRNA processed_transcript A549@1.30555,AG04450@0.826994,BJ@1.2627,GM12878@0.685966,H1HESC@1.37138,HELAS3@1.19178,HEPG2@2.5685,HMEC@0.359902,HSMM@1.2994,HUVEC@0.865906,K562@0.592967,MCF7@0.89562,NHEK@0.356525,NHLF@1.13034,SKNSHRA@2.08843, 0 0 0 0 ENSG00000223891.1 ENST00000437730.1 chr20:42839632-42854667 4 1559 13470 intergenic 1.13 0 1,1,1 1 0,0,0 0 4.57735708982925 0 6.5157152020526 1.1920564216778 84.843 6.60166773572803 1.25924276169265 86.347 0 0 chimp,human,macaque,marmoset,orangutan, lincRNA processed_transcript A549@1.30555,AG04450@0.826994,BJ@1.2627,GM12878@0.685966,H1HESC@1.37138,HELAS3@1.19178,HEPG2@2.5685,HMEC@0.359902,HSMM@1.2994,HUVEC@0.865906,K562@0.592967,MCF7@0.89562,NHEK@0.356525,NHLF@1.13034,SKNSHRA@2.08843, 0 0 0 0 ENSG00000223891.1 ENST00000442383.1 chr20:42839722-42854667 2 1480 13463 intergenic 1.13 0 1,1,1 1 0,0,0 0 4.57973705711951 0 0 1.15850850479091 95.18 0 1.22379855901359 96.811 0 0 chimp,human,macaque,marmoset,orangutan, lincRNA processed_transcript A549@1.30555,AG04450@0.826994,BJ@1.2627,GM12878@0.685966,H1HESC@1.37138,HELAS3@1.19178,HEPG2@2.5685,HMEC@0.359902,HSMM@1.2994,HUVEC@0.865906,K562@0.592967,MCF7@0.89562,NHEK@0.356525,NHLF@1.13034,SKNSHRA@2.08843, 0 0 0 0 ENSG00000223891.1 ENST00000435163.1 chr20:42839892-42853618 4 691 13029 intergenic 0.10 0 0,0,1 0 0,0,0 0 4.73228950802057 0 4.68017366136035 0.948883260419065 95.18 4.77568740955137 1.0112825236012 96.811 0 0 chimp,horse,human,macaque,marmoset,orangutan, lincRNA processed_transcript A549@1.30555,AG04450@0.826994,BJ@1.2627,GM12878@0.685966,H1HESC@1.37138,HELAS3@1.19178,HEPG2@2.5685,HMEC@0.359902,HSMM@1.2994,HUVEC@0.865906,K562@0.592967,MCF7@0.89562,NHEK@0.356525,NHLF@1.13034,SKNSHRA@2.08843, 0 0 0 0 ENSG00000226812.1 ENST00000438702.1 chr20:42976192-42983825 4 750 6877 exonic 3.88 1 0,1,1 0 0,0,0 0 3.91100770684892 142.095 35.6106666666667 7.53686200378072 145.762 77.516 7.58484804420532 142.225 0 0 cat,chimp,dog,elephant,human,macaque,orangutan,panda,pig, antisense antisense A549@0.221111,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0.0566185,HEPG2@0.237374,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000226812.1 ENST00000430481.1 chr20:42979362-42980742 2 368 1010 exonic 2.83 0 0,1,0 0 0,0,0 0 0 26.896 25.1385869565217 4.54455445544554 47.241 85.9076086956522 4.57821782178218 47.537 0 0 cat,chimp,cow,dog,elephant,guinea_pig,human,macaque,marmoset,orangutan,panda,pig, antisense antisense A549@0.221111,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0.0566185,HEPG2@0.237374,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000229005.1 ENST00000452481.1 chr20:43006383-43024346 4 644 17313 intronic -0.76 1 0,1,1 0 0,0,0 42.8757763975155 18.2310402587651 56.16 71.0186335403727 20.8552532778837 84.062 71.3291925465838 19.2905908854618 90.615 0 0 chimp,elephant,horse,human,macaque,marmoset,orangutan,panda,pig, lincRNA processed_transcript A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0.465384,HEPG2@1.0291,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000233376.1 ENST00000455642.1 chr20:43018264-43020177 2 401 1510 intronic -0.61 0 0,0,0 0 0,0,0 0 97.2953642384106 0 0 40.8059602649007 1.434 0 41.1715231788079 1.506 0 0 chimp,human,macaque,orangutan, lincRNA processed_transcript A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0.111367,HEPG2@0.422824,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000237907.1 ENST00000415299.1 chr20:43077417-43078732 2 409 904 intergenic -2.34 0 0,0,1 0 0,0,0 0 0 0 0 2.53871681415929 21.247 0 2.63827433628319 23.451 0 0 chimp,human,macaque,marmoset,orangutan,pig, antisense antisense A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0.073005,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000132832.4 ENST00000255183.3 chr20:43285092-43292139 4 997 6044 intergenic 5.61 1 0,1,1 0 0,0,0 0 0 0 0 0.355890138980807 0 0 0.556254136333554 0 0 0 chimp,human,macaque,marmoset,orangutan, antisense antisense A549@0.053497,AG04450@0.005667,BJ@0.0103665,GM12878@0.64949,H1HESC@0.0207565,HELAS3@3.06905,HEPG2@0.37615,HMEC@0,HSMM@0.0140055,HUVEC@0.0090045,K562@0,MCF7@0.192024,NHEK@0.002781,NHLF@0.0316175,SKNSHRA@0.207852, 0 0 0 0 ENSG00000132832.4 ENST00000415889.1 chr20:43285092-43324737 6 1410 38225 intergenic 5.61 1 0,0,1 0 0,0,0 0 1.61399607586658 0 0 3.06003924133421 0 0 3.57451929365598 0 0 0 chimp,human,macaque, antisense antisense A549@0.053497,AG04450@0.005667,BJ@0.0103665,GM12878@0.64949,H1HESC@0.0207565,HELAS3@3.06905,HEPG2@0.37615,HMEC@0,HSMM@0.0140055,HUVEC@0.0090045,K562@0,MCF7@0.192024,NHEK@0.002781,NHLF@0.0316175,SKNSHRA@0.207852, 0 0 0 0 ENSG00000244558.1 ENST00000427598.1 chr20:43323533-43367537 3 859 43141 intronic -0.53 1 0,1,1 0 0,0,0 0 4.18650471709047 0 0 11.6488723024501 12.36 0 12.6935166083308 20.069 0 0 cat,chimp,human,macaque,marmoset,orangutan,panda, antisense antisense A549@0.379926,AG04450@0.070335,BJ@0.126499,GM12878@0.184609,H1HESC@0.107637,HELAS3@3.97224,HEPG2@0.827095,HMEC@0.0095,HSMM@0,HUVEC@0.0656975,K562@0.0131235,MCF7@0.267852,NHEK@0.00590933,NHLF@0.0939085,SKNSHRA@1.06804, 0 0 0 0 ENSG00000244558.1 ENST00000419931.1 chr20:43323717-43324725 2 512 494 intergenic -1.37 0 0,0,1 0 0,0,0 0 0 0 0 0 0 0 0 0 0 0 cat,chimp,horse,human,macaque,marmoset,orangutan,panda, antisense antisense A549@0.379926,AG04450@0.070335,BJ@0.126499,GM12878@0.184609,H1HESC@0.107637,HELAS3@3.97224,HEPG2@0.827095,HMEC@0.0095,HSMM@0,HUVEC@0.0656975,K562@0.0131235,MCF7@0.267852,NHEK@0.00590933,NHLF@0.0939085,SKNSHRA@1.06804, 0 0 0 0 ENSG00000244558.1 ENST00000445420.1 chr20:43323843-43374636 3 449 50340 exonic 0.60 0 0,1,1 0 0,0,0 0 4.25359555025824 50.426 37.4164810690423 12.239670242352 138.491 41.8930957683742 13.7105284068335 151.866 0 0 cat,chimp,horse,human,macaque,marmoset,orangutan,panda, antisense antisense A549@0.379926,AG04450@0.070335,BJ@0.126499,GM12878@0.184609,H1HESC@0.107637,HELAS3@3.97224,HEPG2@0.827095,HMEC@0.0095,HSMM@0,HUVEC@0.0656975,K562@0.0131235,MCF7@0.267852,NHEK@0.00590933,NHLF@0.0939085,SKNSHRA@1.06804, 0 0 0 0 ENSG00000244558.1 ENST00000427303.1 chr20:43340503-43374662 5 523 33628 exonic 4.79 0 0,1,1 0 0,0,0 0 3.51510645890329 50.426 59.961759082218 13.4338051623647 123.931 67.1357552581262 15.0313429285119 135.564 0 0 chimp,cow,dog,elephant,horse,human,macaque,marmoset,orangutan, antisense antisense A549@0.379926,AG04450@0.070335,BJ@0.126499,GM12878@0.184609,H1HESC@0.107637,HELAS3@3.97224,HEPG2@0.827095,HMEC@0.0095,HSMM@0,HUVEC@0.0656975,K562@0.0131235,MCF7@0.267852,NHEK@0.00590933,NHLF@0.0939085,SKNSHRA@1.06804, 0 0 0 0 ENSG00000234194.1 ENST00000439786.1 chr20:43380451-43383718 2 463 2802 exonic -4.61 0 0,1,1 0 0,0,1 293.507559395248 58.3319057815846 2.022 223.388768898488 296.051034975018 9.285 212.244060475162 300.399000713776 8.496 0 0 cat,chimp,cow,dog,elephant,guinea_pig,horse,human,macaque,marmoset,mouse,orangutan,panda,pig,rabbit,rat, antisense antisense A549@0.0066755,AG04450@0,BJ@0.0575785,GM12878@0,H1HESC@0.0181035,HELAS3@1.1834,HEPG2@0.53968,HMEC@0.026417,HSMM@0,HUVEC@0,K562@0,MCF7@1.42979,NHEK@0,NHLF@0.339946,SKNSHRA@0.030393, 0 0 0 0 ENSG00000227477.1 ENST00000434401.1 chr20:43592435-43595043 3 2062 542 intergenic 11.21 1 1,1,1 0 0,0,0 0 0 73.518 0 0 74.585 0 0 74.798 0 0 chimp,human,orangutan, lincRNA processed_transcript A549@0.109879,AG04450@0.0486475,BJ@0.043986,GM12878@0.08385,H1HESC@0.016055,HELAS3@0.217241,HEPG2@0.0678035,HMEC@0.095178,HSMM@0.034357,HUVEC@0.0341665,K562@0.144692,MCF7@0.093221,NHEK@0.0838927,NHLF@0.163137,SKNSHRA@0.0393465, 0 0 0 0 ENSG00000227477.1 ENST00000445571.1 chr20:43592441-43594258 3 550 1263 intergenic 11.21 1 0,0,1 0 0,0,0 0 0 53.246 0 0 67.484 0 0 72.125 0 0 chimp,human,macaque,marmoset,orangutan, lincRNA processed_transcript A549@0.109879,AG04450@0.0486475,BJ@0.043986,GM12878@0.08385,H1HESC@0.016055,HELAS3@0.217241,HEPG2@0.0678035,HMEC@0.095178,HSMM@0.034357,HUVEC@0.0341665,K562@0.144692,MCF7@0.093221,NHEK@0.0838927,NHLF@0.163137,SKNSHRA@0.0393465, 0 0 0 0 ENSG00000234011.2 ENST00000424705.1 chr20:44076042-44076982 2 512 426 intergenic 10.73 0 0,0,1 0 0,0,0 0 0 0 0 9.53755868544601 0 0 9.69718309859155 0 0 0 chimp,cow,human,macaque,orangutan, lincRNA lincRNA A549@0.096528,AG04450@0.0611635,BJ@0.0883585,GM12878@0.180464,H1HESC@0.252863,HELAS3@0.275294,HEPG2@0.951057,HMEC@0,HSMM@0.13175,HUVEC@0.319398,K562@0.027104,MCF7@0.05147,NHEK@0.0382353,NHLF@0,SKNSHRA@0.217173, 0 0 0 0 ENSG00000237464.1 ENST00000417630.1 chr20:44116253-44118888 2 353 2280 intergenic -0.20 1 0,1,0 0 0,0,0 0 0 0 0 0 0 144.756373937677 11.7043859649123 163.154 0 0 chimp,human,marmoset,orangutan, antisense antisense A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0.294393,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0.007542,MCF7@0.0057915,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000204044.5 ENST00000535913.1 chr20:44642141-44650712 3 1952 6615 exonic 8.32 0 0,1,1 0 0,0,0 50.5922131147541 9.06394557823129 7.71 97.4707991803279 9.41254724111867 35.702 103.289959016393 10.9271352985639 35.258 0 0 cat,chimp,cow,dog,elephant,horse,human,macaque,marmoset,orangutan, antisense antisense A549@0.0552395,AG04450@0.0047965,BJ@0.0024975,GM12878@0.010477,H1HESC@0.240552,HELAS3@0.042692,HEPG2@0.103141,HMEC@0,HSMM@0,HUVEC@0.0121255,K562@0.11309,MCF7@0.190585,NHEK@0,NHLF@0.002482,SKNSHRA@0.251928, 0 0 0 0 ENSG00000204044.5 ENST00000419897.1 chr20:44649258-44650366 2 489 617 exonic -4.98 0 0,1,0 0 0,0,0 11.6973415132924 0 57.29 59.4989775051125 0 43.437 66.2760736196319 0 48.523 0 0 chimp,elephant,human,macaque,marmoset,orangutan, antisense antisense A549@0.0552395,AG04450@0.0047965,BJ@0.0024975,GM12878@0.010477,H1HESC@0.240552,HELAS3@0.042692,HEPG2@0.103141,HMEC@0,HSMM@0,HUVEC@0.0121255,K562@0.11309,MCF7@0.190585,NHEK@0,NHLF@0.002482,SKNSHRA@0.251928, 0 0 0 0 ENSG00000229957.1 ENST00000450586.1 chr20:44797043-44799876 2 2135 696 intergenic -0.51 0 0,1,1 0 0,0,0 51.0154566744731 0 0 53.7451990632318 2.64511494252874 0 55.3133489461358 2.73563218390805 0 0 0 cat,chimp,cow,dog,elephant,guinea_pig,horse,human,macaque,marmoset,orangutan,panda,pig, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0.003883,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0.002873,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000236028.1 ENST00000414085.1 chr20:45529782-45530365 2 421 160 intronic 0 0 0,1,0 0 0,0,0 0 0 0 14.9643705463183 0 29.448 17.4346793349169 0 43.58 0 0 chimp,cow,dog,elephant,guinea_pig,horse,human,macaque,marmoset,mouse,orangutan,panda,pig, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0.0392065,H1HESC@0.0137605,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0.0109785,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000231119.2 ENST00000413818.2 chr20:45981305-45983377 2 1807 263 intronic 0.51 1 0,1,0 0 0,0,0 355.972329828445 25.3117870722433 604.2 217.808522412839 154.463878326996 280.933 240.873270614278 162.25855513308 279.987 0 0 cat,chimp,cow,dog,guinea_pig,horse,human,macaque,marmoset,mouse,orangutan,panda,pig, lincRNA processed_transcript A549@0.0512395,AG04450@0.008521,BJ@0.0243115,GM12878@0.124222,H1HESC@0.0097885,HELAS3@0.004615,HEPG2@0.001508,HMEC@0.049796,HSMM@0.0050405,HUVEC@0.232417,K562@0.0730935,MCF7@0.012871,NHEK@0.0596997,NHLF@0.0042665,SKNSHRA@0.20125, 0 0 0 0 ENSG00000224565.1 ENST00000437920.1 chr20:46020673-46041071 4 746 19646 intergenic -1.63 0 0,0,1 0 0,0,0 47.5817694369973 3.44436526519393 0 37.0831099195711 2.32571515830194 0 36.6367292225201 2.6959686450168 0 0 0 cow,human,macaque,marmoset,orangutan, lincRNA lincRNA A549@0.017676,AG04450@0,BJ@0,GM12878@2.2431,H1HESC@0,HELAS3@0.031179,HEPG2@0.024439,HMEC@0,HSMM@0.0027435,HUVEC@0,K562@0.022748,MCF7@0.013646,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000255438.1 ENST00000526566.1 chr20:46306645-46315041 3 2431 5961 exonic 13.50 0 0,0,0 0 0,0,0 19.0736322501028 13.0355645026002 0 48.1665981077746 23.6123133702399 32.512 53.8568490333196 22.1707767153162 39.006 0 1 human,macaque, antisense antisense A549@0.111618,AG04450@0.0012165,BJ@0.0118195,GM12878@0,H1HESC@0.0072755,HELAS3@0.0403745,HEPG2@0.0144445,HMEC@0,HSMM@0,HUVEC@0.0524285,K562@0,MCF7@0.247111,NHEK@0.00589633,NHLF@0.0016035,SKNSHRA@0.061642, 0 0 0 0 ENSG00000234967.1 ENST00000431915.1 chr20:46579543-46580799 2 423 831 intergenic -1.07 1 0,0,1 0 0,0,0 0 0 57.116 4.21985815602837 0 46.691 1.31442080378251 66.7942238267148 120.333 0 0 chimp,horse,human,macaque,marmoset,orangutan,panda,pig, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@1.54306,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000228503.1 ENST00000416646.1 chr20:46586766-46587347 2 454 125 intergenic 2.15 1 0,0,0 0 0,0,0 0 0 0 0 0 0 15.726872246696 0 0 0 0 cat,chimp,cow,dog,horse,human,macaque,marmoset,orangutan,panda,pig, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@2.26675,NHEK@0,NHLF@0,SKNSHRA@0.012196, 0 0 0 0 ENSG00000237423.1 ENST00000428999.1 chr20:46609232-46617488 2 427 7827 intergenic -2.09 0 0,0,0 0 0,0,0 0 1.70435671393893 0 0 4.03986201609812 0 0 4.23776670499553 0 0 0 chimp,cow,human,macaque,marmoset,orangutan,panda, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0.067839,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@3.77982,NHEK@0,NHLF@0.0135435,SKNSHRA@0.0888145, 0 0 0 0 ENSG00000229522.1 ENST00000425385.1 chr20:46612148-46613057 2 448 459 intergenic 3.85 1 0,0,1 0 0,0,0 0 0 11.73 0 0 19.974 0 0 21.133 0 0 chimp,elephant,human,macaque,marmoset,orangutan,panda, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0.0103805,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000235621.3 ENST00000420477.1 chr20:46983957-46995507 3 505 11041 intergenic 3.40 0 0,0,0 0 0,0,0 0 0 0 0 1.01603115659813 0 0 1.39462005253147 0 0 0 chimp,human,macaque,marmoset,orangutan,pig, lincRNA processed_transcript A549@0.022701,AG04450@0,BJ@0.000788,GM12878@1.72947,H1HESC@0.010879,HELAS3@0.35018,HEPG2@0.774499,HMEC@0,HSMM@0.002481,HUVEC@0.0008695,K562@0,MCF7@0.734171,NHEK@0.000415667,NHLF@0,SKNSHRA@0.0514175, 0 0 0 0 ENSG00000230236.1 ENST00000451572.1 chr20:46987429-46988440 2 549 460 intergenic 3.94 1 0,0,0 0 0,0,0 0 0 0 0 0 0 0 0 0 0 0 chimp,human,macaque,marmoset,orangutan, lincRNA lincRNA A549@0.006121,AG04450@0,BJ@0,GM12878@0.0053075,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000235621.3 ENST00000416742.1 chr20:46988693-46999372 5 3539 7132 intergenic 3.00 1 1,1,1 1 0,0,0 0 0 0 0 1.57291082445317 0 0 2.15900168255749 0 0 0 human,macaque,marmoset,orangutan, lincRNA processed_transcript A549@0.022701,AG04450@0,BJ@0.000788,GM12878@1.72947,H1HESC@0.010879,HELAS3@0.35018,HEPG2@0.774499,HMEC@0,HSMM@0.002481,HUVEC@0.0008695,K562@0,MCF7@0.734171,NHEK@0.000415667,NHLF@0,SKNSHRA@0.0514175, 0 0 0 0 ENSG00000235621.3 ENST00000425021.1 chr20:46988755-46989647 2 436 454 intergenic 0.68 1 0,1,1 1 0,0,0 0 0 0 21.8922018348624 0 0 31.4151376146789 0 0 0 0 cat,chimp,cow,dog,elephant,horse,human,macaque,marmoset,orangutan,panda,pig, lincRNA processed_transcript A549@0.022701,AG04450@0,BJ@0.000788,GM12878@1.72947,H1HESC@0.010879,HELAS3@0.35018,HEPG2@0.774499,HMEC@0,HSMM@0.002481,HUVEC@0.0008695,K562@0,MCF7@0.734171,NHEK@0.000415667,NHLF@0,SKNSHRA@0.0514175, 0 0 0 0 ENSG00000235621.3 ENST00000433094.1 chr20:46994390-46999372 3 3068 1910 intergenic 3.00 1 0,0,1 0 0,0,0 0 0 0 0 0 0 0 0 0 0 0 cow,human,macaque,marmoset,orangutan, lincRNA processed_transcript A549@0.022701,AG04450@0,BJ@0.000788,GM12878@1.72947,H1HESC@0.010879,HELAS3@0.35018,HEPG2@0.774499,HMEC@0,HSMM@0.002481,HUVEC@0.0008695,K562@0,MCF7@0.734171,NHEK@0.000415667,NHLF@0,SKNSHRA@0.0514175, 0 0 0 0 ENSG00000235621.3 ENST00000545181.1 chr20:46997418-46998074 1 656 0 intergenic 1.20 0 0,0,0 0 0,0,0 0 0 0 0 0 0 0 0 0 0 0 cow,elephant,guinea_pig,human,macaque,marmoset,orangutan, lincRNA processed_transcript A549@0.022701,AG04450@0,BJ@0.000788,GM12878@1.72947,H1HESC@0.010879,HELAS3@0.35018,HEPG2@0.774499,HMEC@0,HSMM@0.002481,HUVEC@0.0008695,K562@0,MCF7@0.734171,NHEK@0.000415667,NHLF@0,SKNSHRA@0.0514175, 0 0 0 0 ENSG00000236874.1 ENST00000446280.1 chr20:47012066-47013638 2 402 1168 intergenic -5.75 0 0,0,0 0 0,0,0 0 0 0 8.88059701492537 2.40154109589041 0 8.74129353233831 2.3638698630137 0 0 0 cat,chimp,human,macaque,marmoset,orangutan,panda, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000229963.1 ENST00000457536.1 chr20:47100223-47130447 2 275 29947 intergenic 4.19 0 0,0,0 0 0,0,0 0 1.64103249073363 0 0 0.155240925635289 0 0 41.3221691655258 0 0 0 chimp,human,macaque,marmoset,orangutan, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000227431.1 ENST00000417781.1 chr20:47657000-47662581 3 553 5024 intergenic 0.74 1 0,0,1 1 0,0,0 0 0 9.54 0 2.14072452229299 50.526 0 109.146496815287 51.193 0 0 chimp,horse,human,macaque,marmoset,orangutan, antisense antisense A549@0,AG04450@0.0290495,BJ@0.01287,GM12878@0.008782,H1HESC@0.026404,HELAS3@0.0827025,HEPG2@0.0950315,HMEC@0,HSMM@0.0041,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0.0040805, 0 0 0 0 ENSG00000227431.1 ENST00000428190.1 chr20:47657000-47662581 2 331 5248 intergenic 0 1 0,0,1 1 0,0,0 0 0 9.54 0 2.04935213414634 50.526 0 104.487804878049 51.193 0 0 chimp,horse,human,macaque,marmoset,orangutan, antisense antisense A549@0,AG04450@0.0290495,BJ@0.01287,GM12878@0.008782,H1HESC@0.026404,HELAS3@0.0827025,HEPG2@0.0950315,HMEC@0,HSMM@0.0041,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0.0040805, 0 0 0 0 ENSG00000177410.8 ENST00000371743.3 chr20:47894715-47905797 5 1003 10071 exonic 9.09 1 1,1,1 0 0,0,0 0 4.94330255188164 0 26.3449651046859 9.07040015887201 40.061 52.3509471585244 11.3865554562606 39.58 0 0 human,macaque,marmoset,orangutan, lincRNA processed_transcript A549@264.748,AG04450@73.9868,BJ@79.9868,GM12878@76.0565,H1HESC@42.5584,HELAS3@191.568,HEPG2@112.531,HMEC@17.7925,HSMM@22.2574,HUVEC@24.2318,K562@126.894,MCF7@70.3924,NHEK@64.7848,NHLF@29.4076,SKNSHRA@42.2728, 0 0 0 0 ENSG00000177410.8 ENST00000417721.1 chr20:47894715-47905797 3 857 10221 exonic 9.09 1 1,1,1 0 0,0,0 0 4.87075628607768 0 30.8331388564761 8.93728597984542 40.061 60.9323220536756 11.2760003913511 39.58 0 0 dog,elephant,human,macaque,marmoset,orangutan,panda, lincRNA processed_transcript A549@264.748,AG04450@73.9868,BJ@79.9868,GM12878@76.0565,H1HESC@42.5584,HELAS3@191.568,HEPG2@112.531,HMEC@17.7925,HSMM@22.2574,HUVEC@24.2318,K562@126.894,MCF7@70.3924,NHEK@64.7848,NHLF@29.4076,SKNSHRA@42.2728, 0 0 0 0 ENSG00000177410.8 ENST00000441722.1 chr20:47894715-47905797 4 942 10134 exonic 9.09 1 1,1,1 0 0,0,0 0 4.91257154134596 0 28.0509554140127 9.0140122360371 40.061 55.7409766454352 11.3157686994277 39.58 0 0 human,macaque,marmoset, lincRNA processed_transcript A549@264.748,AG04450@73.9868,BJ@79.9868,GM12878@76.0565,H1HESC@42.5584,HELAS3@191.568,HEPG2@112.531,HMEC@17.7925,HSMM@22.2574,HUVEC@24.2318,K562@126.894,MCF7@70.3924,NHEK@64.7848,NHLF@29.4076,SKNSHRA@42.2728, 0 0 0 0 ENSG00000177410.8 ENST00000450535.1 chr20:47894715-47905797 6 1069 10003 exonic 9.09 1 1,1,1 0 0,0,0 0 4.97690692792162 0 24.7184284377923 9.13206038188543 40.061 49.1188026192703 11.4639608117565 39.58 0 0 human,macaque,marmoset,orangutan, lincRNA processed_transcript A549@264.748,AG04450@73.9868,BJ@79.9868,GM12878@76.0565,H1HESC@42.5584,HELAS3@191.568,HEPG2@112.531,HMEC@17.7925,HSMM@22.2574,HUVEC@24.2318,K562@126.894,MCF7@70.3924,NHEK@64.7848,NHLF@29.4076,SKNSHRA@42.2728, 0 0 0 0 ENSG00000177410.8 ENST00000458653.1 chr20:47894808-47905797 5 591 10390 exonic 3.49 1 1,1,1 0 0,0,0 0 4.79153031761309 0 3.23519458544839 10.7266602502406 44.471 45.1319796954315 13.090375360924 44.08 0 0 chimp,human,macaque,marmoset,orangutan, lincRNA processed_transcript A549@264.748,AG04450@73.9868,BJ@79.9868,GM12878@76.0565,H1HESC@42.5584,HELAS3@191.568,HEPG2@112.531,HMEC@17.7925,HSMM@22.2574,HUVEC@24.2318,K562@126.894,MCF7@70.3924,NHEK@64.7848,NHLF@29.4076,SKNSHRA@42.2728, 0 0 0 0 ENSG00000177410.8 ENST00000326677.5 chr20:47895179-47905797 4 500 10112 intergenic 2.16 1 1,1,1 1 0,0,0 0 4.92325949367089 0 0.51 8.98318829113924 66.485 51.192 11.2260680379747 67.359 0 0 chimp,human,macaque,marmoset, lincRNA processed_transcript A549@264.748,AG04450@73.9868,BJ@79.9868,GM12878@76.0565,H1HESC@42.5584,HELAS3@191.568,HEPG2@112.531,HMEC@17.7925,HSMM@22.2574,HUVEC@24.2318,K562@126.894,MCF7@70.3924,NHEK@64.7848,NHLF@29.4076,SKNSHRA@42.2728, 0 0 0 0 ENSG00000177410.8 ENST00000428008.1 chr20:47895179-47905797 5 561 10049 intergenic 2.16 1 1,1,1 1 0,0,0 0 4.95412478853617 0 0.454545454545455 9.03950641854911 66.485 45.6256684491979 11.2964474077023 67.359 0 0 chimp,human,macaque,marmoset,orangutan, lincRNA processed_transcript A549@264.748,AG04450@73.9868,BJ@79.9868,GM12878@76.0565,H1HESC@42.5584,HELAS3@191.568,HEPG2@112.531,HMEC@17.7925,HSMM@22.2574,HUVEC@24.2318,K562@126.894,MCF7@70.3924,NHEK@64.7848,NHLF@29.4076,SKNSHRA@42.2728, 0 0 0 0 ENSG00000231265.1 ENST00000431460.1 chr20:48657253-48658041 2 460 326 intergenic 1.89 1 0,0,1 0 0,0,0 0 0 0 0 0 7.378 0 0 7.394 0 0 chimp,cow,elephant,human,marmoset,orangutan,panda, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0.0555355,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000237595.1 ENST00000435301.1 chr20:48780001-48782639 2 731 1905 intergenic -0.75 0 0,0,1 0 0,0,0 0 0 0 0 0 0 0 69.3328083989501 0 0 0 chimp,human,macaque,marmoset,orangutan, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0.006165,HEPG2@0.00872,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0.0293555, 0 0 0 0 ENSG00000234698.1 ENST00000444478.1 chr20:48782899-48786032 2 423 2708 intergenic 0.95 1 0,1,0 1 0,0,0 0 0 0 0 0 6.921 0 0 113.014 0 0 chimp,human, lincRNA lincRNA A549@0.0650625,AG04450@0.0475105,BJ@0.018608,GM12878@0.020517,H1HESC@0.0205435,HELAS3@0.131645,HEPG2@0.029039,HMEC@0,HSMM@0.0216385,HUVEC@0.046986,K562@0.074438,MCF7@0,NHEK@0.0103627,NHLF@0.022955,SKNSHRA@0, 0 0 0 0 ENSG00000234698.1 ENST00000451960.1 chr20:48785883-48788279 2 339 2055 intergenic 0.95 0 0,0,1 0 0,0,0 0 0 0 11.2920353982301 1.74598540145985 0 11.2212389380531 1.79659367396594 0 0 0 cat,chimp,cow,dog,horse,human,macaque,orangutan,pig, lincRNA lincRNA A549@0.0650625,AG04450@0.0475105,BJ@0.018608,GM12878@0.020517,H1HESC@0.0205435,HELAS3@0.131645,HEPG2@0.029039,HMEC@0,HSMM@0.0216385,HUVEC@0.046986,K562@0.074438,MCF7@0,NHEK@0.0103627,NHLF@0.022955,SKNSHRA@0, 0 0 0 0 ENSG00000231742.1 ENST00000427333.1 chr20:48789087-48789907 3 500 316 intergenic 4.04 0 0,1,0 1 0,0,0 0 0 0 0 0 0 0 0 0 0 0 NA lincRNA lincRNA A549@1.67823,AG04450@0.040533,BJ@0.0595475,GM12878@0,H1HESC@0.111739,HELAS3@2.29732,HEPG2@3.12107,HMEC@0.022923,HSMM@0.0291615,HUVEC@0.0816775,K562@0.009232,MCF7@0,NHEK@0.00999533,NHLF@0.0341955,SKNSHRA@0.009866, 0 0 0 0 ENSG00000231742.1 ENST00000411453.1 chr20:48789127-48793096 3 570 3395 intergenic 4.04 0 0,1,0 1 0,0,0 0 0 0 0 0 0 0 0 0 0 0 chimp,human,macaque, lincRNA lincRNA A549@1.67823,AG04450@0.040533,BJ@0.0595475,GM12878@0,H1HESC@0.111739,HELAS3@2.29732,HEPG2@3.12107,HMEC@0.022923,HSMM@0.0291615,HUVEC@0.0816775,K562@0.009232,MCF7@0,NHEK@0.00999533,NHLF@0.0341955,SKNSHRA@0.009866, 0 0 0 0 ENSG00000250931.2 ENST00000513193.2 chr20:48864180-48883632 6 2409 17033 intergenic 0.15 0 0,0,1 0 0,0,0 0 8.51770093348206 10.912 13.3088418430884 11.9458110726237 44.421 13.4848484848485 12.5219280220748 47.469 0 1 chimp,human,macaque, lincRNA lincRNA A549@0.0058605,AG04450@0.001335,BJ@0.002039,GM12878@0.0050085,H1HESC@0,HELAS3@0.018801,HEPG2@0.004518,HMEC@0,HSMM@0.001888,HUVEC@0,K562@0,MCF7@0.014972,NHEK@0.014043,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000224397.1 ENST00000425497.1 chr20:48884023-48896332 4 2006 10297 intergenic 2.80 1 0,1,1 0 0,0,0 21.561814556331 9.42614353695251 0 27.9775672981057 22.6653394192483 32.385 27.8005982053838 23.4378945323881 32.587 0 0 chimp,dog,horse,human,macaque,marmoset,orangutan,panda, lincRNA lincRNA A549@0.0126215,AG04450@0,BJ@0,GM12878@0.0019055,H1HESC@0,HELAS3@0.0254965,HEPG2@0.0560845,HMEC@0.057682,HSMM@0,HUVEC@0,K562@0.0074165,MCF7@0,NHEK@0.016237,NHLF@0.068853,SKNSHRA@0, 0 0 0 0 ENSG00000224397.1 ENST00000445003.1 chr20:48884036-48894964 3 536 10388 intergenic 2.80 1 1,1,1 0 0,0,0 0 9.34356950327301 0 13.1623134328358 22.4667886022333 32.385 13.1996268656716 23.2325760492876 32.587 0 0 chimp,horse,human,macaque,orangutan, lincRNA lincRNA A549@0.0126215,AG04450@0,BJ@0,GM12878@0.0019055,H1HESC@0,HELAS3@0.0254965,HEPG2@0.0560845,HMEC@0.057682,HSMM@0,HUVEC@0,K562@0.0074165,MCF7@0,NHEK@0.016237,NHLF@0.068853,SKNSHRA@0, 0 0 0 0 ENSG00000224397.1 ENST00000422459.1 chr20:48892854-48895574 3 1055 1661 intergenic 2.80 0 0,1,0 0 0,0,0 14.0663507109005 0 0 5.88151658767772 3.75316074653823 9.99 5.96113744075829 4.9789283564118 10.02 0 0 chimp,human,macaque,marmoset,orangutan, lincRNA lincRNA A549@0.0126215,AG04450@0,BJ@0,GM12878@0.0019055,H1HESC@0,HELAS3@0.0254965,HEPG2@0.0560845,HMEC@0.057682,HSMM@0,HUVEC@0,K562@0.0074165,MCF7@0,NHEK@0.016237,NHLF@0.068853,SKNSHRA@0, 0 0 0 0 ENSG00000224397.1 ENST00000421019.1 chr20:48894071-48894952 2 684 195 intergenic -4.13 1 0,0,1 0 0,0,0 0 0 0 9.1140350877193 0 0 9.34210526315789 0 1.88 0 0 chimp,cow,dog,elephant,horse,human,macaque,marmoset,orangutan,panda, lincRNA lincRNA A549@0.0126215,AG04450@0,BJ@0,GM12878@0.0019055,H1HESC@0,HELAS3@0.0254965,HEPG2@0.0560845,HMEC@0.057682,HSMM@0,HUVEC@0,K562@0.0074165,MCF7@0,NHEK@0.016237,NHLF@0.068853,SKNSHRA@0, 0 0 0 0 ENSG00000203999.4 ENST00000371639.3 chr20:48909257-48931459 5 2276 19918 intergenic 2.03 1 1,1,1 1 0,0,0 17.2605448154657 28.1697459584296 76.63 19.5619507908612 27.5563309569234 57.091 19.5329525483304 27.9243899989959 46.293 0 0 chimp,human,macaque,marmoset,orangutan,pig, lincRNA processed_transcript A549@3.10597,AG04450@0.757459,BJ@0.437297,GM12878@0.000884,H1HESC@0.289775,HELAS3@4.75148,HEPG2@8.0188,HMEC@0.06875,HSMM@0.368267,HUVEC@0.633259,K562@0.143252,MCF7@0.268819,NHEK@0.0498427,NHLF@0.470705,SKNSHRA@4.98043, 0 0 0 0 ENSG00000233077.1 ENST00000441214.1 chr20:48927248-48937879 3 2247 8380 intergenic 7.00 1 0,0,1 0 0,0,0 64.7263017356475 12.0572792362768 44.536 48.2883845126836 12.4715990453461 30.28 40.1379617267468 13.6842482100239 30.127 0 0 chimp,dog,human,macaque,marmoset,orangutan,panda,pig, lincRNA processed_transcript A549@0.126026,AG04450@0.039024,BJ@0.0299765,GM12878@0,H1HESC@0.0067925,HELAS3@0.453173,HEPG2@0.132066,HMEC@0.025478,HSMM@0.055238,HUVEC@0.0108065,K562@0.0274675,MCF7@0.0036145,NHEK@0.00562267,NHLF@0.005184,SKNSHRA@0.0266995, 0 0 0 0 ENSG00000203999.4 ENST00000457853.1 chr20:48927511-48928551 2 941 97 intergenic 3.29 0 0,1,0 0 0,0,0 13.0074388947928 0 0 35.9925611052072 177.907216494845 0 36.0828905419766 177.278350515464 0 0 0 chimp,human,macaque,marmoset,orangutan, lincRNA processed_transcript A549@3.10597,AG04450@0.757459,BJ@0.437297,GM12878@0.000884,H1HESC@0.289775,HELAS3@4.75148,HEPG2@8.0188,HMEC@0.06875,HSMM@0.368267,HUVEC@0.633259,K562@0.143252,MCF7@0.268819,NHEK@0.0498427,NHLF@0.470705,SKNSHRA@4.98043, 0 0 0 0 ENSG00000232043.1 ENST00000431019.1 chr20:49187512-49194578 2 4585 2479 exonic 5.79 0 0,1,1 0 0,0,0 8.54961832061069 6.12343686970553 55.03 16.0303162486369 1.63896732553449 84.744 16.3565976008724 3.36183945139169 94.663 0 0 chimp,horse,human,macaque,marmoset,orangutan,pig, antisense antisense A549@0.002495,AG04450@0.011818,BJ@0.0005275,GM12878@0.00809,H1HESC@0.0019035,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0.0017945,HUVEC@0,K562@0.0050605,MCF7@0,NHEK@0.00186367,NHLF@0,SKNSHRA@0.0275485, 0 0 0 0 ENSG00000234693.1 ENST00000452336.1 chr20:49262008-49276828 3 635 14181 intronic 4.18 1 0,1,0 0 0,0,0 38.9795275590551 6.67752626754108 0 14.0614173228346 10.2793879134053 0 17.7574803149606 11.321768563571 0 0 0 chimp,dog,elephant,horse,human,macaque,mouse,orangutan,panda,pig, antisense antisense A549@0.0068045,AG04450@0.278199,BJ@0,GM12878@0,H1HESC@0,HELAS3@0.007205,HEPG2@0.0649465,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0.01078,NHEK@0,NHLF@0.0151215,SKNSHRA@0, 0 0 0 0 ENSG00000234693.1 ENST00000435177.1 chr20:49269739-49278812 4 535 8532 intronic 3.95 1 0,0,0 0 0,0,0 0 7.58743553680262 0 9.15140186915888 13.6617440225035 0 11.4822429906542 13.6474449132677 0 0 0 cow,dog,elephant,horse,human,macaque,marmoset,orangutan,panda,pig, antisense antisense A549@0.0068045,AG04450@0.278199,BJ@0,GM12878@0,H1HESC@0,HELAS3@0.007205,HEPG2@0.0649465,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0.01078,NHEK@0,NHLF@0.0151215,SKNSHRA@0, 0 0 0 0 ENSG00000232358.1 ENST00000424566.1 chr20:49615907-49626556 3 799 9846 exonic 19.23 0 0,1,0 0 0,0,0 307.814768460576 35.4366240097502 0 286.872340425532 51.2943327239488 0 274.116395494368 53.1950030469226 0 0 0 cat,chimp,cow,dog,guinea_pig,horse,human,macaque,marmoset,orangutan,panda,pig,platypus,rabbit, antisense antisense A549@0.0084105,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0.003309,HEPG2@0.0068025,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0.002829, 0 0 0 0 ENSG00000227964.1 ENST00000438154.1 chr20:50448336-50479451 3 2323 28788 intergenic 2.64 0 0,0,0 0 0,0,0 29.8235040895394 14.8867236348479 0 21.4222987516143 12.9889189940253 0 19.4270340077486 14.5177157148812 0 0 0 chimp,human,marmoset,orangutan, lincRNA lincRNA A549@0.0149175,AG04450@0.0046995,BJ@0.0104285,GM12878@0,H1HESC@0.007507,HELAS3@0,HEPG2@0.009354,HMEC@0,HSMM@0.0160855,HUVEC@0.002296,K562@0.002302,MCF7@0.0232465,NHEK@0.00502533,NHLF@0,SKNSHRA@0.0042635, 0 0 0 0 ENSG00000234948.1 ENST00000454600.1 chr20:50827184-51263280 7 738 435346 intergenic -3.81 0 0,1,1 1 0,0,0 39.3468834688347 35.627905160493 0 16.6233062330623 35.4008099304921 0 18.1693766937669 39.5687246466029 0 0 0 chimp,cow,dog,horse,human,macaque,marmoset,orangutan,pig, processed_transcript processed_transcript A549@0,AG04450@0,BJ@0.0048945,GM12878@0,H1HESC@0.001036,HELAS3@0.0014655,HEPG2@0.0019615,HMEC@0,HSMM@0.0019255,HUVEC@0.0112805,K562@0.637083,MCF7@0,NHEK@0.002695,NHLF@0,SKNSHRA@0.000517, 0 0 0 0 ENSG00000225785.1 ENST00000414598.1 chr20:51068003-51072158 3 428 3723 intergenic -2.09 0 0,0,0 0 0,0,0 1.80140186915888 9.40639269406393 0 124.238317757009 15.1267794789149 0 146.556074766355 13.7499328498523 0 0 0 chimp,elephant,guinea_pig,horse,human,macaque,marmoset,orangutan,pig,rabbit, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000232465.1 ENST00000416237.1 chr20:51104461-51117130 2 571 12096 intergenic -6.51 0 0,1,1 0 0,0,0 283.99649737303 60.2905092592593 429.922 119.320490367776 44.8534226190476 373.813 129.274956217163 57.9291501322751 420.026 0 0 cat,chimp,cow,dog,guinea_pig,horse,human,macaque,marmoset,panda,pig,rabbit, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000234948.1 ENST00000428009.1 chr20:51237377-51266970 3 4387 25202 intergenic 4.87 0 0,1,0 0 0,0,0 23.4283109186232 20.2417268470756 0 20.8335992705721 29.8014443298151 0 28.0408023706405 33.1884771049917 0 0 0 cat,chimp,human,macaque,orangutan,panda, processed_transcript processed_transcript A549@0,AG04450@0,BJ@0.0048945,GM12878@0,H1HESC@0.001036,HELAS3@0.0014655,HEPG2@0.0019615,HMEC@0,HSMM@0.0019255,HUVEC@0.0112805,K562@0.637083,MCF7@0,NHEK@0.002695,NHLF@0,SKNSHRA@0.000517, 0 0 0 0 ENSG00000232294.1 ENST00000421642.1 chr20:51288456-51307147 5 481 18202 intergenic 2.42 0 0,0,0 0 0,0,0 47.1517671517672 19.3659487968355 114.293 89.2723492723493 30.0913086474014 160.656 81.991683991684 32.2869464893968 159.901 0 0 chimp,cow,horse,human,macaque,marmoset,mouse,orangutan, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0.0486775,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0.0048875, 0 0 0 0 ENSG00000232294.1 ENST00000413070.1 chr20:51290950-51298117 4 461 6700 intergenic -0.18 1 0,0,1 0 0,0,0 0 22.1008955223881 0 14.1041214750542 35.6016417910448 0 14.9457700650759 41.9041791044776 0 0 0 chimp,horse,human,macaque,marmoset,orangutan, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0.0486775,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0.0048875, 0 0 0 0 ENSG00000232294.1 ENST00000425279.1 chr20:51297967-51307119 3 318 8830 intergenic 3.42 0 0,0,0 0 0,0,0 71.3207547169811 23.1509626274066 0 141.647798742138 34.3689694224236 0 130.861635220126 34.0719139297848 0 0 0 cat,chimp,cow,dog,horse,human,macaque,marmoset,orangutan,pig,rabbit,rat, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0.0486775,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0.0048875, 0 0 0 0 ENSG00000232294.1 ENST00000437987.1 chr20:51297967-51307119 2 180 8970 intergenic -4.87 0 0,0,0 0 0,0,0 0 25.3632107023411 0 11.6888888888889 38.6896321070234 0 12.0888888888889 38.0070234113712 0 0 0 NA lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0.0486775,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0.0048875, 0 0 0 0 ENSG00000232294.1 ENST00000448013.1 chr20:51297967-51307119 4 534 8612 intergenic 3.42 0 0,0,0 0 0,0,0 42.4719101123596 23.73699489085 0 84.3520599250936 35.2389688806317 0 77.9288389513109 34.93439386902 0 0 0 cat,chimp,dog,human,macaque,marmoset,orangutan,panda, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0.0486775,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0.0048875, 0 0 0 0 ENSG00000232294.1 ENST00000422666.1 chr20:51301661-51307468 3 371 5432 intergenic -7.64 0 0,0,1 0 0,0,0 104.539083557951 28.4889543446244 68.706 118.191374663073 33.7928939617084 143.464 101.436657681941 33.6791237113402 141.424 0 0 chimp,human,macaque,marmoset,orangutan,pig, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0.0486775,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0.0048875, 0 0 0 0 ENSG00000232286.1 ENST00000426963.1 chr20:51474877-51479394 2 457 4058 intergenic -2.56 0 0,0,0 0 0,0,0 0 6.89206505667817 0 2.52954048140044 9.28733366190242 0 2.52954048140044 11.8260226712666 0 0 0 chimp,cow,horse,human,macaque,panda, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0.017849,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000223492.1 ENST00000432706.1 chr20:51785182-51796089 2 1618 9287 intronic -0.48 1 0,0,1 0 0,0,0 1.68603213844252 54.5017766770755 160.608 13.0735475896168 73.4744266178529 115.046 16.7045735475896 74.4450306880586 116.995 0 0 chimp,dog,elephant,guinea_pig,horse,human,macaque,marmoset,orangutan,panda,pig, antisense antisense A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0.302582,MCF7@0,NHEK@0,NHLF@0.068887,SKNSHRA@0, 0 0 0 0 ENSG00000227705.1 ENST00000435057.1 chr20:51812768-51825244 5 480 11988 intronic -2.21 0 0,0,0 0 0,0,0 24.375 55.3024691358025 0 18.70625 51.132966299633 1.673 22.64375 50.7943777110444 1.757 0 0 chimp,dog,horse,human,macaque,marmoset,orangutan,panda, antisense antisense A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000231703.1 ENST00000436286.1 chr20:52014199-52017772 2 2927 644 intronic 3.59 0 0,0,0 0 0,0,0 69.8100444140758 0 0 70.1503245644004 0 0 71.7406901264093 0 0 0 0 chimp,human,macaque,marmoset,orangutan, lincRNA processed_transcript A549@0,AG04450@0,BJ@0,GM12878@0.002753,H1HESC@0.0702235,HELAS3@0.121133,HEPG2@0.176463,HMEC@0,HSMM@0.0127735,HUVEC@0,K562@0.0015855,MCF7@0.194354,NHEK@0,NHLF@0,SKNSHRA@0.0053465, 0 0 0 0 ENSG00000197670.5 ENST00000424252.1 chr20:52169309-52191847 6 1941 20587 intronic 6.34 0 0,0,0 0 0,0,0 0 24.8282411230388 0 0 25.264098703065 0 0 28.3027638801185 0 0 0 chimp,human,macaque,orangutan, lincRNA processed_transcript A549@0,AG04450@0,BJ@0,GM12878@0.0087355,H1HESC@0.0030525,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0.12942,NHEK@0,NHLF@0,SKNSHRA@0.002763, 0 0 0 0 ENSG00000235415.1 ENST00000444112.1 chr20:52224893-52251129 3 378 25854 exonic 2.82 0 0,0,1 0 0,0,0 0 18.695985147366 0 95.5291005291005 15.9382300611124 0.69 97.6058201058201 18.7589928057554 0.705 0 0 chimp,human,marmoset,orangutan, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0.006152,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0.006094,MCF7@0.523579,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000225563.1 ENST00000423233.1 chr20:52416362-52417857 2 343 1150 intergenic -4.39 1 0,0,0 0 0,0,0 0 0 0 18.798833819242 0 0 20.0874635568513 0 0 0 0 chimp,horse,human,macaque,marmoset,orangutan,panda, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0.0063065,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0.023574,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000236352.1 ENST00000450473.1 chr20:52556699-52559047 3 881 1463 exonic 3.75 0 0,0,0 0 0,0,0 45.9023836549376 33.8988380041012 0 5.12826333711691 16.4114832535885 0 15.1963677639047 15.4333561175666 1.36 0 0 cat,chimp,cow,dog,horse,human,macaque,marmoset,orangutan,panda,pig, antisense antisense A549@0.009822,AG04450@0.005071,BJ@0.0127965,GM12878@3.1012,H1HESC@0.153028,HELAS3@0.002644,HEPG2@0.008237,HMEC@0,HSMM@0.080896,HUVEC@0.0182755,K562@0.0105065,MCF7@0.166141,NHEK@0.00894067,NHLF@0.008731,SKNSHRA@0.005142, 0 0 0 0 ENSG00000224008.1 ENST00000433766.1 chr20:54036874-54043735 3 2287 4570 intergenic 0.96 0 0,0,0 0 0,0,0 13.5986007870573 15.0185995623632 210.12 14.3222562308701 14.6663019693654 202.517 11.3248797551377 26.5910284463895 179.952 0 0 chimp,human,orangutan, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0.0099805,HUVEC@0,K562@0,MCF7@0.171232,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000235166.1 ENST00000416190.1 chr20:54039581-54084752 8 1332 43825 intergenic 4.89 0 0,0,0 0 0,0,0 0 15.249948659441 31.1 22.8438438438438 16.1274386765545 49.962 39.9834834834835 16.7237649743297 63.7 0 0 chimp,horse,human,macaque,marmoset,orangutan, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0.002172,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000235166.1 ENST00000450623.1 chr20:54039603-54043328 3 610 3111 intergenic 4.89 1 0,0,0 0 0,0,0 0 22.0620379299261 31.1 45.9639344262295 5.27418836387014 49.962 83.1934426229508 9.26583092253295 63.7 0 0 cat,chimp,dog,elephant,guinea_pig,human,macaque,marmoset,opossum,orangutan,platypus, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0.002172,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000230843.1 ENST00000431983.1 chr20:54871023-54874216 2 451 2740 intergenic 3.41 1 0,0,0 0 0,0,0 0 5.2043795620438 0 0 5.95109489051095 0 0 6.29051094890511 0 0 0 chimp,human,macaque,marmoset,orangutan, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0.0045795,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0.005032,HUVEC@0,K562@0.0591025,MCF7@0.12393,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000225657.2 ENST00000434176.1 chr20:55152619-55171182 6 692 17861 intergenic -2.42 0 0,0,0 0 0,0,0 0 0 0 11.5245664739884 0.878786182184648 0 11.7413294797688 1.12110184200213 0 0 0 chimp,dog,human,macaque,marmoset, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000225657.2 ENST00000437350.1 chr20:55171366-55173677 2 296 2013 intergenic 0 1 0,1,0 0 0,0,0 0 0 0 0 0 0 0 0 0 0 0 chimp,horse,human,orangutan, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000231604.1 ENST00000458293.1 chr20:55305453-55306516 2 481 580 intergenic 0.07 0 0,0,0 0 0,0,0 0 0 0 0 0 0 0 3.35172413793103 0 0 0 cat,chimp,cow,dog,human,macaque,marmoset,orangutan,panda, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0.0329685,HEPG2@0.0363955,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000231078.1 ENST00000442780.1 chr20:55680797-55682184 3 374 1009 intergenic -2.66 1 0,0,0 0 0,0,0 0 0 0 0 0 0 0 0 0 0 0 chimp,horse,human,macaque,marmoset,orangutan, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0.0054535,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000203266.2 ENST00000366097.2 chr20:55689971-55697148 3 767 6406 intergenic -2.58 0 0,1,0 0 0,0,0 0 0 0 0 0 0 0 34.3243833905713 4.374 0 0 chimp,human,macaque,marmoset, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0.002611,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000235032.1 ENST00000445956.1 chr20:55789928-55790922 2 434 558 intronic -2.76 0 0,0,0 0 0,0,0 0 0 0 22.1198156682028 0 0 19.8594470046083 0 0 0 0 cat,cow,elephant,horse,human,macaque,marmoset,panda,pig, antisense antisense A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0.0047155,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000226308.1 ENST00000412321.1 chr20:55841853-55858054 2 1164 15035 intergenic 7.93 1 0,1,0 0 0,0,0 8.83161512027491 0.417026937146658 386.757 20.2929553264605 5.0616561356834 447.186 27.8522336769759 8.30189557698703 346.112 0 0 chimp,human,marmoset,orangutan, lincRNA processed_transcript A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0.0285865,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0.0411575,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000226308.1 ENST00000426580.1 chr20:55841858-55855541 3 249 13430 intergenic 9.13 0 0,1,0 0 0,0,0 0 0.4668652271035 383.757 25.2570281124498 5.66656738644825 445.221 27.5461847389558 9.29404318689501 344.347 0 0 chimp,human,marmoset, lincRNA processed_transcript A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0.0285865,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0.0411575,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000218018.2 ENST00000417346.1 chr20:55959216-55968118 2 1538 7362 exonic 15.42 0 0,1,0 0 0,0,0 32.7698309492848 1.88264058679707 18.655 45.1144343302991 23.3758489540886 30.712 42.2815344603381 24.1316218418908 37.541 0 0 chimp,horse,human,orangutan, antisense antisense A549@0.005777,AG04450@0.017551,BJ@0,GM12878@0.331108,H1HESC@0.009381,HELAS3@0.016355,HEPG2@0.005534,HMEC@0.005318,HSMM@0.0466855,HUVEC@0.0147525,K562@0.0647455,MCF7@0.0224895,NHEK@0.00171067,NHLF@0.002534,SKNSHRA@0.0176895, 0 0 0 0 ENSG00000251422.1 ENST00000503777.1 chr20:56130115-56134053 2 2065 1871 exonic 4.08 0 0,0,0 0 0,0,0 2.73268765133172 0 0 2.25617433414044 0 3.179 3.29200968523002 0 3.245 0 1 chimp,human,macaque,orangutan, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0.0424075,HEPG2@0.048093,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0.003979,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000227297.1 ENST00000424850.1 chr20:56174751-56176256 2 821 682 intergenic 1.16 0 0,0,0 0 0,0,0 0 78.1231671554252 0 0 17.8357771260997 0 0 30.3739002932551 0 0 0 chimp,human,macaque,marmoset,orangutan, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0.0049965,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000203971.1 ENST00000371169.1 chr20:56532182-56534716 2 1852 680 intergenic 3.15 1 0,0,0 0 0,0,0 0 0 0 0 7.84264705882353 0 2.26943844492441 24.9191176470588 0 0 0 chimp,human,macaque,orangutan, lincRNA lincRNA A549@0.016743,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000225708.1 ENST00000441277.1 chr20:56644110-56647116 2 1010 1994 intergenic -2.30 0 0,1,0 0 0,0,0 15.7128712871287 0 0 10.9138613861386 0 0 25.8257425742574 0 7.89 0 0 cat,chimp,cow,human,macaque,marmoset,orangutan,pig,rat, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0.0026225,SKNSHRA@0, 0 0 0 0 ENSG00000225708.1 ENST00000452842.1 chr20:56644110-56647126 2 742 2272 intergenic -2.30 0 0,1,0 0 0,0,0 21.3881401617251 0 0 14.855795148248 0 0 35.1536388140162 0 7.89 0 0 cat,chimp,cow,dog,guinea_pig,horse,human,macaque,marmoset,opossum,orangutan,panda,pig, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0.0026225,SKNSHRA@0, 0 0 0 0 ENSG00000231290.1 ENST00000427140.1 chr20:57090435-57194944 7 2085 102412 intergenic 4.21 1 0,0,0 0 0,0,0 9.25275779376499 16.6914814670156 0 21.8354916067146 14.0798636878491 41.183 33.3731414868106 78.0831933757763 36.658 0 0 chimp,horse,human,macaque,marmoset,orangutan, lincRNA processed_transcript A549@0.015523,AG04450@3.45919,BJ@0.718792,GM12878@0.612109,H1HESC@0.0314225,HELAS3@0.0086615,HEPG2@0.0039295,HMEC@0.090423,HSMM@0.717554,HUVEC@0.0080935,K562@0.0607595,MCF7@0.151409,NHEK@0.120157,NHLF@0.168423,SKNSHRA@0.0749885, 0 0 0 0 ENSG00000231290.1 ENST00000445984.1 chr20:57090555-57098858 4 562 7735 intergenic 2.58 0 0,1,0 1 0,0,0 34.3274021352313 10.0848093083387 0 52.067615658363 16.3044602456367 43.095 92.635231316726 20.4209437621202 38.602 0 0 chimp,cow,dog,elephant,guinea_pig,horse,human,macaque,marmoset,orangutan,panda, lincRNA processed_transcript A549@0.015523,AG04450@3.45919,BJ@0.718792,GM12878@0.612109,H1HESC@0.0314225,HELAS3@0.0086615,HEPG2@0.0039295,HMEC@0.090423,HSMM@0.717554,HUVEC@0.0080935,K562@0.0607595,MCF7@0.151409,NHEK@0.120157,NHLF@0.168423,SKNSHRA@0.0749885, 0 0 0 0 ENSG00000231290.1 ENST00000448374.1 chr20:57090555-57099784 4 542 8681 intergenic 3.80 0 0,1,1 1 0,0,0 35.5940959409594 10.5755097339016 0 53.9889298892989 15.6999193641286 43.095 97.9649446494465 44.1633452367239 38.602 0 0 cat,chimp,cow,dog,guinea_pig,horse,human,macaque,marmoset,orangutan,panda, lincRNA processed_transcript A549@0.015523,AG04450@3.45919,BJ@0.718792,GM12878@0.612109,H1HESC@0.0314225,HELAS3@0.0086615,HEPG2@0.0039295,HMEC@0.090423,HSMM@0.717554,HUVEC@0.0080935,K562@0.0607595,MCF7@0.151409,NHEK@0.120157,NHLF@0.168423,SKNSHRA@0.0749885, 0 0 0 0 ENSG00000231290.1 ENST00000420279.1 chr20:57090555-57122878 5 550 31765 intergenic 2.58 0 0,1,0 1 0,0,0 35.0763636363636 23.1349283802928 0 53.2036363636364 17.642719974815 43.095 96.54 216.233716354478 38.602 0 0 chimp,elephant,horse,human,macaque,marmoset,orangutan,panda, lincRNA processed_transcript A549@0.015523,AG04450@3.45919,BJ@0.718792,GM12878@0.612109,H1HESC@0.0314225,HELAS3@0.0086615,HEPG2@0.0039295,HMEC@0.090423,HSMM@0.717554,HUVEC@0.0080935,K562@0.0607595,MCF7@0.151409,NHEK@0.120157,NHLF@0.168423,SKNSHRA@0.0749885, 0 0 0 0 ENSG00000231290.1 ENST00000447767.1 chr20:57090599-57101088 3 2627 7858 intergenic 4.26 0 0,1,1 1 0,0,0 12.5968785687096 9.92695342326292 0 16.1773886562619 16.0492491728175 43.095 26.1640654739246 20.1012980402138 38.602 0 1 chimp,human,orangutan, lincRNA retained_intron A549@0.015523,AG04450@3.45919,BJ@0.718792,GM12878@0.612109,H1HESC@0.0314225,HELAS3@0.0086615,HEPG2@0.0039295,HMEC@0.090423,HSMM@0.717554,HUVEC@0.0080935,K562@0.0607595,MCF7@0.151409,NHEK@0.120157,NHLF@0.168423,SKNSHRA@0.0749885, 0 0 0 0 ENSG00000231290.1 ENST00000427794.1 chr20:57090624-57097548 3 458 6462 intergenic 2.58 0 1,1,1 1 0,0,0 0 2.59826679046735 0 0 3.41349427421851 43.095 0 4.60770659238626 38.602 0 0 chimp,horse,human,macaque,marmoset,orangutan, lincRNA processed_transcript A549@0.015523,AG04450@3.45919,BJ@0.718792,GM12878@0.612109,H1HESC@0.0314225,HELAS3@0.0086615,HEPG2@0.0039295,HMEC@0.090423,HSMM@0.717554,HUVEC@0.0080935,K562@0.0607595,MCF7@0.151409,NHEK@0.120157,NHLF@0.168423,SKNSHRA@0.0749885, 0 0 0 0 ENSG00000231290.1 ENST00000439558.1 chr20:57090783-57149026 4 644 57593 intergenic 1.69 1 0,1,0 0 0,0,0 0 26.3764867258174 0 22.2872670807453 19.6849269876547 15.159 22.5807453416149 24.3840570902714 20.245 0 0 chimp,elephant,human,macaque,marmoset,orangutan, lincRNA processed_transcript A549@0.015523,AG04450@3.45919,BJ@0.718792,GM12878@0.612109,H1HESC@0.0314225,HELAS3@0.0086615,HEPG2@0.0039295,HMEC@0.090423,HSMM@0.717554,HUVEC@0.0080935,K562@0.0607595,MCF7@0.151409,NHEK@0.120157,NHLF@0.168423,SKNSHRA@0.0749885, 0 0 0 0 ENSG00000231290.1 ENST00000424205.1 chr20:57098216-57148880 4 577 50081 intergenic 1.69 1 1,1,1 0 0,0,0 39.1126516464471 28.8928535772049 32.396 84.4644714038128 20.3164872905893 62.51 126.599653379549 149.11225814181 67.833 0 0 cat,chimp,cow,dog,human,macaque,orangutan,rabbit, lincRNA processed_transcript A549@0.015523,AG04450@3.45919,BJ@0.718792,GM12878@0.612109,H1HESC@0.0314225,HELAS3@0.0086615,HEPG2@0.0039295,HMEC@0.090423,HSMM@0.717554,HUVEC@0.0080935,K562@0.0607595,MCF7@0.151409,NHEK@0.120157,NHLF@0.168423,SKNSHRA@0.0749885, 0 0 0 0 ENSG00000254620.1 ENST00000525424.1 chr20:57169473-57179029 2 505 9049 intergenic 0.52 0 0,0,0 0 0,0,0 6.41584158415842 6.77157696983092 49.005 13.0376237623762 9.56392971599072 64.876 12.8633663366337 10.9671786937783 63.346 0 0 cat,chimp,cow,horse,human,macaque,marmoset,orangutan,panda, lincRNA lincRNA A549@0.0042815,AG04450@0.07535,BJ@0.0281565,GM12878@0.002836,H1HESC@0.0039095,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0.005879,HUVEC@0.0245225,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0.003563, 0 0 0 0 ENSG00000254419.1 ENST00000530479.1 chr20:57285851-57286689 2 575 261 intronic -0.49 0 0,1,0 0 0,0,0 0 0 0 0 0 0 0 0 0 0 0 chimp,horse,human,macaque,orangutan, sense_intronic sense_intronic A549@0.044729,AG04450@0.0187165,BJ@0.034544,GM12878@0.0538275,H1HESC@0.195901,HELAS3@0.115904,HEPG2@0.0739595,HMEC@0,HSMM@0.0078785,HUVEC@0.290601,K562@0.0156845,MCF7@0.638408,NHEK@0.0336197,NHLF@0,SKNSHRA@0.0656825, 0 0 0 0 ENSG00000235590.2 ENST00000424094.1 chr20:57393974-57425958 5 1171 30805 intronic 11.50 1 1,1,1 1 0,0,0 37.4286934244236 33.0102256127252 39.668 28.0076857386849 31.7660444732998 60.298 34.6404782237404 31.3162473624412 59.589 0 0 cat,chimp,cow,dog,horse,human,macaque,marmoset,orangutan,panda,pig, antisense antisense A549@0.0086035,AG04450@0.166956,BJ@0.147694,GM12878@0.23141,H1HESC@1.66895,HELAS3@0.01178,HEPG2@0.040589,HMEC@0.059191,HSMM@0.133648,HUVEC@0.00827,K562@0.0168565,MCF7@0.838507,NHEK@0.0780783,NHLF@0.0549535,SKNSHRA@0.344385, 0 0 0 0 ENSG00000235590.2 ENST00000443966.1 chr20:57414837-57415899 1 1062 0 exonic 9.91 0 0,0,0 0 0,0,0 302.545197740113 0 19.937 316.854048964219 0 61.093 283.171374764595 0 61.09 0 0 cat,chimp,cow,dog,elephant,guinea_pig,horse,human,macaque,marmoset,mouse,orangutan,panda,pig,rabbit,rat, antisense antisense A549@0.0086035,AG04450@0.166956,BJ@0.147694,GM12878@0.23141,H1HESC@1.66895,HELAS3@0.01178,HEPG2@0.040589,HMEC@0.059191,HSMM@0.133648,HUVEC@0.00827,K562@0.0168565,MCF7@0.838507,NHEK@0.0780783,NHLF@0.0549535,SKNSHRA@0.344385, 0 0 0 0 ENSG00000225806.1 ENST00000441270.1 chr20:57438583-57463881 5 922 24368 intronic -1.93 0 1,1,1 0 0,0,0 83.0336225596529 22.4733667104399 390.848 52.7321041214751 22.344673342088 408.297 57.939262472885 28.3711835193697 338.111 0 0 cat,chimp,cow,elephant,horse,human,macaque,marmoset,orangutan,rabbit, antisense antisense A549@0,AG04450@0.002418,BJ@0.025185,GM12878@0.038555,H1HESC@0,HELAS3@0.125515,HEPG2@0.0953825,HMEC@0.013251,HSMM@0.0702,HUVEC@0.0032105,K562@0.0485645,MCF7@0.0199355,NHEK@0.077164,NHLF@0.0083725,SKNSHRA@0.0418715, 0 0 0 0 ENSG00000225806.1 ENST00000424434.1 chr20:57456805-57463864 4 363 6690 intronic 0 0 1,1,1 0 0,0,0 38.7603305785124 43.8847533632287 389.046 52.8512396694215 43.6539611360239 409.504 65.1735537190083 52.0251121076233 338.91 0 0 chimp,elephant,human,macaque,marmoset,orangutan, antisense antisense A549@0,AG04450@0.002418,BJ@0.025185,GM12878@0.038555,H1HESC@0,HELAS3@0.125515,HEPG2@0.0953825,HMEC@0.013251,HSMM@0.0702,HUVEC@0.0032105,K562@0.0485645,MCF7@0.0199355,NHEK@0.077164,NHLF@0.0083725,SKNSHRA@0.0418715, 0 0 0 0 ENSG00000234747.1 ENST00000423755.1 chr20:57476354-57476982 2 348 278 intronic 0 0 0,0,1 0 0,0,0 0 0 0 0 0 0 0 0 0 0 0 chimp,horse,human,macaque,orangutan, antisense antisense A549@0,AG04450@0,BJ@0,GM12878@0.007587,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0.0070175,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0.0064825, 0 0 0 0 ENSG00000225129.1 ENST00000424662.1 chr20:57927250-57932829 2 591 4986 intergenic -1.97 0 0,0,0 0 0,0,0 0 0 0 0 0 7.531 0 0.536101083032491 10.035 0 0 chimp,cow,horse,human,macaque,marmoset,orangutan, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000230352.1 ENST00000440889.1 chr20:57935982-57939828 2 618 3226 intergenic 1.07 0 0,0,0 0 0,0,0 0 3.45939243645381 0 0 23.1053936763794 2.629 0 25.7083075015499 2.761 0 0 chimp,cow,human,macaque,marmoset,orangutan,pig, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000227282.1 ENST00000443747.1 chr20:58090246-58091094 2 564 282 intergenic 0.72 0 0,0,0 0 0,0,0 0 0 0 0 0 0 0 0 0 0 0 chimp,human,macaque,orangutan, lincRNA lincRNA A549@0,AG04450@0,BJ@0.0126425,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000238194.1 ENST00000443055.1 chr20:58201519-58203334 2 666 1147 intronic 4.89 0 0,1,0 0 0,0,0 0 0 0 8.55555555555556 0 19.523 9.56606606606607 0 20.318 0 0 chimp,dog,horse,human,macaque,marmoset,orangutan,panda,rat, antisense antisense A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000238194.1 ENST00000451510.1 chr20:58201536-58203344 2 663 1143 intronic 4.89 0 0,1,0 0 0,0,0 0 0 0 12.6666666666667 0 16.523 13.8039215686275 0 17.228 0 0 chimp,dog,horse,human,macaque,marmoset,orangutan,panda,rat, antisense antisense A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000228340.1 ENST00000426753.1 chr20:58662895-58676427 5 646 12878 intergenic 6.02 0 0,0,1 0 0,0,0 121.504643962848 8.99984469638143 0 61.9102167182663 10.215794378009 3.24 68.0325077399381 14.0354092250349 7.425 0 0 chimp,dog,human,orangutan, lincRNA processed_transcript A549@0.0041895,AG04450@0.0825795,BJ@0.0017515,GM12878@0.050546,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0.23292,HSMM@0.0939705,HUVEC@0.012972,K562@0.003304,MCF7@0.528867,NHEK@0.212521,NHLF@0.050054,SKNSHRA@0.0011105, 0 0 0 0 ENSG00000228340.1 ENST00000428772.1 chr20:58662912-58676427 3 468 13043 intergenic 0 0 0,0,1 0 0,0,0 167.717948717949 8.88599248639117 0 85.457264957265 10.0865598405275 3.24 93.9081196581197 13.8578547880089 7.425 0 0 chimp,cow,dog,horse,human,macaque,marmoset,mouse,opossum,orangutan,panda,platypus,rat, lincRNA processed_transcript A549@0.0041895,AG04450@0.0825795,BJ@0.0017515,GM12878@0.050546,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0.23292,HSMM@0.0939705,HUVEC@0.012972,K562@0.003304,MCF7@0.528867,NHEK@0.212521,NHLF@0.050054,SKNSHRA@0.0011105, 0 0 0 0 ENSG00000228340.1 ENST00000431181.1 chr20:58662919-58821187 8 850 157404 intergenic 0 0 0,0,0 0 0,0,0 27.7941176470588 9.63330029732408 0 6.25176470588235 10.1859546136057 3.24 6.07764705882353 12.8095219943585 7.425 0 0 chimp,human,macaque,orangutan,panda, lincRNA processed_transcript A549@0.0041895,AG04450@0.0825795,BJ@0.0017515,GM12878@0.050546,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0.23292,HSMM@0.0939705,HUVEC@0.012972,K562@0.003304,MCF7@0.528867,NHEK@0.212521,NHLF@0.050054,SKNSHRA@0.0011105, 0 0 0 0 ENSG00000228340.1 ENST00000427691.1 chr20:58662943-58755971 6 528 92490 intergenic 2.52 0 0,0,0 0 0,0,0 0 12.2874905395178 0 0 12.6109200994702 3.24 0 14.9083684722673 7.425 0 0 chimp,human,macaque,marmoset,orangutan, lincRNA processed_transcript A549@0.0041895,AG04450@0.0825795,BJ@0.0017515,GM12878@0.050546,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0.23292,HSMM@0.0939705,HUVEC@0.012972,K562@0.003304,MCF7@0.528867,NHEK@0.212521,NHLF@0.050054,SKNSHRA@0.0011105, 0 0 0 0 ENSG00000228340.1 ENST00000439507.1 chr20:58663003-58676427 4 411 13007 intergenic 0 0 0,0,1 0 0,0,0 190.978102189781 8.9105866072115 0 97.30900243309 10.1144768201738 3.24 106.931873479319 13.8962097332206 7.425 0 0 cat,chimp,cow,dog,elephant,guinea_pig,horse,human,macaque,marmoset,mouse,opossum,orangutan,panda,pig,platypus,rabbit,rat, lincRNA processed_transcript A549@0.0041895,AG04450@0.0825795,BJ@0.0017515,GM12878@0.050546,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0.23292,HSMM@0.0939705,HUVEC@0.012972,K562@0.003304,MCF7@0.528867,NHEK@0.212521,NHLF@0.050054,SKNSHRA@0.0011105, 0 0 0 0 ENSG00000228340.1 ENST00000457508.1 chr20:58663694-58676427 4 441 12286 intergenic 0 0 0,0,1 0 0,0,0 177.986394557823 9.43350154647566 0 90.6893424036281 10.7080416734495 0 99.6575963718821 14.7117043789679 0 0 0 chimp,cow,dog,elephant,horse,human,macaque,marmoset,mouse,opossum,orangutan,platypus,rabbit,rat, lincRNA processed_transcript A549@0.0041895,AG04450@0.0825795,BJ@0.0017515,GM12878@0.050546,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0.23292,HSMM@0.0939705,HUVEC@0.012972,K562@0.003304,MCF7@0.528867,NHEK@0.212521,NHLF@0.050054,SKNSHRA@0.0011105, 0 0 0 0 ENSG00000228340.1 ENST00000458422.1 chr20:58696116-58859671 4 369 163180 intergenic 16.18 1 0,1,0 0 0,0,0 0 9.27219634759162 0 0 9.43022429219267 0 0 11.9126547371001 0 0 0 chimp,human,macaque,marmoset,orangutan, lincRNA processed_transcript A549@0.0041895,AG04450@0.0825795,BJ@0.0017515,GM12878@0.050546,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0.23292,HSMM@0.0939705,HUVEC@0.012972,K562@0.003304,MCF7@0.528867,NHEK@0.212521,NHLF@0.050054,SKNSHRA@0.0011105, 0 0 0 0 ENSG00000228340.1 ENST00000432910.1 chr20:58713548-58897314 5 2038 181720 intergenic 2.55 0 0,1,0 1 0,0,0 0 8.51866607968303 0 0 8.72349768875193 3.346 0 11.368192824125 5.741 0 0 chimp,human,macaque,marmoset,orangutan, lincRNA processed_transcript A549@0.0041895,AG04450@0.0825795,BJ@0.0017515,GM12878@0.050546,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0.23292,HSMM@0.0939705,HUVEC@0.012972,K562@0.003304,MCF7@0.528867,NHEK@0.212521,NHLF@0.050054,SKNSHRA@0.0011105, 0 0 0 0 ENSG00000228340.1 ENST00000437035.1 chr20:58755936-59102516 5 494 346078 intergenic 2.55 0 0,0,1 0 0,0,0 0 9.21594553828906 0 0 7.24187032981005 1.841 0 11.0501072012668 1.904 0 0 chimp,cow,horse,human,macaque,marmoset,orangutan, lincRNA processed_transcript A549@0.0041895,AG04450@0.0825795,BJ@0.0017515,GM12878@0.050546,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0.23292,HSMM@0.0939705,HUVEC@0.012972,K562@0.003304,MCF7@0.528867,NHEK@0.212521,NHLF@0.050054,SKNSHRA@0.0011105, 0 0 0 0 ENSG00000228340.1 ENST00000421257.1 chr20:58755937-58906642 3 822 149879 intergenic -2.82 0 0,0,1 0 0,0,0 0 8.88367950146452 0 0 8.91532502885661 1.841 0 11.7282207647502 1.904 0 0 cat,chimp,cow,horse,human,macaque,marmoset,orangutan,panda, lincRNA processed_transcript A549@0.0041895,AG04450@0.0825795,BJ@0.0017515,GM12878@0.050546,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0.23292,HSMM@0.0939705,HUVEC@0.012972,K562@0.003304,MCF7@0.528867,NHEK@0.212521,NHLF@0.050054,SKNSHRA@0.0011105, 0 0 0 0 ENSG00000228340.1 ENST00000427820.1 chr20:58755946-58825060 4 801 68307 intergenic 1.82 0 0,0,1 0 0,0,0 0 5.91227839020891 0 0 6.47429985213814 1.841 0 9.40695682726514 1.904 0 0 chimp,human,macaque,marmoset,orangutan, lincRNA processed_transcript A549@0.0041895,AG04450@0.0825795,BJ@0.0017515,GM12878@0.050546,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0.23292,HSMM@0.0939705,HUVEC@0.012972,K562@0.003304,MCF7@0.528867,NHEK@0.212521,NHLF@0.050054,SKNSHRA@0.0011105, 0 0 0 0 ENSG00000228608.1 ENST00000443366.1 chr20:59049459-59055732 2 427 5844 intergenic -4.14 1 0,0,1 0 0,0,0 99.9718969555035 33.8856947296372 5.94 107.274004683841 11.4604722792608 12.877 138.384074941452 16.1498973305955 18.968 0 0 cat,chimp,cow,dog,horse,human,macaque,orangutan,platypus,rabbit, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000248220.1 ENST00000506383.1 chr20:59205912-59228954 2 3238 19802 intergenic 0.98 0 0,0,0 0 0,0,0 4.19085855466337 23.948187051813 11.424 0 18.7877487122513 9.938 9.82334774552193 25.4289970710029 11.682 1 1 chimp,human,macaque,marmoset,orangutan, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0.0025765,HEPG2@0.0033675,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000229755.1 ENST00000420710.1 chr20:59652280-59652872 2 498 92 intergenic 4.56 0 0,0,0 0 0,0,0 0 0 43.919 0 0 11.04 0 0 19.849 0 0 chimp,human,macaque,marmoset,orangutan,pig, lincRNA lincRNA A549@0.0086825,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000229606.1 ENST00000441660.1 chr20:59654196-59655235 2 389 648 intergenic 0 1 0,0,0 0 0,0,0 22.4678663239075 0 47.363 0 0 11.04 0 0 22.669 0 0 chimp,human,macaque,marmoset,orangutan, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000225106.1 ENST00000447909.1 chr20:60313275-60330112 2 935 15900 intronic 5.36 0 0,0,1 0 0,0,0 0 3.12704402515723 0 0 7.32031446540881 0 23.8245989304813 12.1511320754717 0 0 0 elephant,human,macaque,orangutan, antisense antisense A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000225106.1 ENST00000442888.1 chr20:60313919-60330081 3 676 15482 intronic 3.65 0 0,1,0 0 0,0,0 0 3.21147138612582 0 0 7.51795633639065 0 0 12.4792016535331 0 0 0 chimp,human,macaque,marmoset,orangutan, antisense antisense A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000226332.1 ENST00000414042.1 chr20:60880488-60881381 2 679 212 exonic 9.57 1 0,1,1 0 0,0,0 30.6229749631812 0 35.226 72.8571428571429 0 46.024 79.3888070692194 0 54.814 0 0 chimp,elephant,guinea_pig,horse,human,macaque,marmoset,orangutan, antisense antisense A549@0.506167,AG04450@0.0479675,BJ@0,GM12878@0,H1HESC@0.0467025,HELAS3@0.193634,HEPG2@0.140188,HMEC@0.060127,HSMM@0.0527395,HUVEC@0.110801,K562@0.0505175,MCF7@0.536309,NHEK@0.245071,NHLF@0.104461,SKNSHRA@0.221365, 0 0 0 0 ENSG00000226332.1 ENST00000448371.1 chr20:60880488-60881452 2 305 657 intronic 3.38 1 0,1,1 0 0,0,0 0 31.648401826484 35.226 0 75.296803652968 55.894 0 82.0471841704718 66.365 0 0 chimp,human,macaque,marmoset,orangutan, antisense antisense A549@0.506167,AG04450@0.0479675,BJ@0,GM12878@0,H1HESC@0.0467025,HELAS3@0.193634,HEPG2@0.140188,HMEC@0.060127,HSMM@0.0527395,HUVEC@0.110801,K562@0.0505175,MCF7@0.536309,NHEK@0.245071,NHLF@0.104461,SKNSHRA@0.221365, 0 0 0 0 ENSG00000228812.2 ENST00000477848.1 chr20:60928066-60931271 3 560 2641 exonic 2.34 0 0,0,0 0 0,0,0 71.0357142857143 3.52934494509655 0 120.65 12.1794774706551 52.677 99.7 15.0045437334343 81.88 0 0 cat,chimp,cow,dog,elephant,guinea_pig,horse,human,macaque,marmoset,mouse,opossum,orangutan,panda,pig,platypus,rat, antisense antisense A549@0.0690565,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0.0069915,HEPG2@0,HMEC@0.013162,HSMM@0.0208545,HUVEC@0,K562@0,MCF7@0,NHEK@0.005202,NHLF@0.0034655,SKNSHRA@0.003294, 0 0 0 0 ENSG00000228812.2 ENST00000478167.1 chr20:60928068-60931527 3 687 2768 exonic 2.41 1 0,0,0 0 0,0,0 37.4148471615721 8.34212427745665 0 87.1630276564774 20.2695086705202 51.575 77.3449781659389 306.383670520231 80.614 0 0 cat,chimp,cow,dog,elephant,guinea_pig,horse,human,macaque,marmoset,mouse,orangutan,panda,platypus, antisense antisense A549@0.0690565,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0.0069915,HEPG2@0,HMEC@0.013162,HSMM@0.0208545,HUVEC@0,K562@0,MCF7@0,NHEK@0.005202,NHLF@0.0034655,SKNSHRA@0.003294, 0 0 0 0 ENSG00000228812.2 ENST00000487421.1 chr20:60928069-60931536 2 610 2855 exonic 2.34 1 0,0,0 0 0,0,0 65.2131147540984 3.26479859894921 0 144.347540983607 11.2665499124343 51.024 126.977049180328 13.8798598949212 79.981 0 0 cat,chimp,cow,dog,elephant,guinea_pig,horse,human,macaque,marmoset,mouse,opossum,orangutan,panda,pig,rabbit, antisense antisense A549@0.0690565,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0.0069915,HEPG2@0,HMEC@0.013162,HSMM@0.0208545,HUVEC@0,K562@0,MCF7@0,NHEK@0.005202,NHLF@0.0034655,SKNSHRA@0.003294, 0 0 0 0 ENSG00000228812.2 ENST00000456721.1 chr20:60928097-60931525 2 444 2982 exonic 7.85 1 0,0,0 0 0,0,0 57.8918918918919 7.74346076458753 0 133.015765765766 18.8148893360161 41.165 117.81981981982 403.072434607646 66.243 0 0 cat,chimp,cow,dog,elephant,guinea_pig,horse,human,macaque,marmoset,mouse,orangutan,panda,platypus,rat, antisense antisense A549@0.0690565,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0.0069915,HEPG2@0,HMEC@0.013162,HSMM@0.0208545,HUVEC@0,K562@0,MCF7@0,NHEK@0.005202,NHLF@0.0034655,SKNSHRA@0.003294, 0 0 0 0 ENSG00000233017.1 ENST00000433121.1 chr20:61004604-61006568 2 475 1487 intergenic 11.02 0 0,1,1 0 0,0,0 0 0 0 0 20.8702084734364 0 0 31.2138533960995 0 0 0 chimp,human,macaque,orangutan, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0.117106,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0.0097355,MCF7@0.102112,NHEK@0.008212,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000174403.11 ENST00000412495.1 chr20:61141550-61148733 7 2295 4876 intronic 8.42 0 0,1,0 0 0,1,0 0 26.8972518457752 0 1.08061002178649 67.0728055783429 3.61 1.00740740740741 69.2934782608696 3.745 1 1 chimp,human,macaque,marmoset,orangutan, antisense antisense A549@0,AG04450@0.000911,BJ@0.019469,GM12878@0,H1HESC@0.16079,HELAS3@0,HEPG2@0.003297,HMEC@0,HSMM@1.35771,HUVEC@0,K562@0,MCF7@0,NHEK@0.00178367,NHLF@0.001493,SKNSHRA@0.0050495, 0 0 0 0 ENSG00000174403.11 ENST00000475015.1 chr20:61141754-61148731 3 2582 4391 intronic 6.12 0 1,1,1 0 0,1,0 0 29.8681393759964 0 0.960495739736638 74.4812115691187 3.61 0.895429899302866 76.9471646549761 3.745 0 1 chimp,human,macaque,orangutan, antisense antisense A549@0,AG04450@0.000911,BJ@0.019469,GM12878@0,H1HESC@0.16079,HELAS3@0,HEPG2@0.003297,HMEC@0,HSMM@1.35771,HUVEC@0,K562@0,MCF7@0,NHEK@0.00178367,NHLF@0.001493,SKNSHRA@0.0050495, 0 0 0 0 ENSG00000174403.11 ENST00000436101.1 chr20:61144021-61148718 6 755 3932 intronic 10.50 0 0,1,0 0 0,1,0 0 33.3547812817904 0 7.13509933774834 82.4364191251271 3.61 7.11523178807947 85.1513224821973 3.745 0 0 chimp,elephant,human,macaque,marmoset,orangutan, antisense antisense A549@0,AG04450@0.000911,BJ@0.019469,GM12878@0,H1HESC@0.16079,HELAS3@0,HEPG2@0.003297,HMEC@0,HSMM@1.35771,HUVEC@0,K562@0,MCF7@0,NHEK@0.00178367,NHLF@0.001493,SKNSHRA@0.0050495, 0 0 0 0 ENSG00000232121.1 ENST00000427132.1 chr20:61265033-61266856 4 495 1322 intergenic 6.08 1 0,0,0 0 0,0,0 0 0 0 0 0 0 0 0 0 0 0 human,macaque,marmoset,orangutan, antisense antisense A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000229882.1 ENST00000418953.1 chr20:61265124-61267214 2 459 1629 intergenic 11.76 1 0,0,0 0 0,0,0 0 0 0 0 0 0 0 0 0 0 0 horse,human,macaque,orangutan, antisense antisense A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000232803.1 ENST00000451648.1 chr20:61294371-61297979 2 647 2959 exonic 15.28 1 0,1,1 0 0,0,0 3.23029366306028 1.20074349442379 0 44.8964451313756 20.3974315647178 0 79.5734157650695 23.755998648192 0 0 0 chimp,human,macaque,marmoset,orangutan,rat, antisense antisense A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@1.01484,HEPG2@4.67075,HMEC@0.040505,HSMM@0,HUVEC@0.003301,K562@0,MCF7@0.001416,NHEK@0.000929667,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000232803.1 ENST00000411824.1 chr20:61294371-61298076 2 807 2896 exonic 14.40 1 1,1,1 0 0,0,0 2.58983890954151 1.22686464088398 0 35.9950433705081 20.8411602209945 0 63.7967781908302 24.2727900552486 0 0 0 chimp,dog,human,macaque,marmoset,orangutan, antisense antisense A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@1.01484,HEPG2@4.67075,HMEC@0.040505,HSMM@0,HUVEC@0.003301,K562@0,MCF7@0.001416,NHEK@0.000929667,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000232803.1 ENST00000433126.1 chr20:61294383-61297974 4 1416 2169 exonic 17.55 1 0,1,1 0 0,0,0 1.47598870056497 1.63808206546796 0 60.8898305084746 1.46795758414016 0 83.7224576271186 1.48778238819733 0 0 0 chimp,dog,elephant,human,macaque,marmoset,orangutan, antisense antisense A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@1.01484,HEPG2@4.67075,HMEC@0.040505,HSMM@0,HUVEC@0.003301,K562@0,MCF7@0.001416,NHEK@0.000929667,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000223669.1 ENST00000430184.1 chr20:61363918-61366699 2 737 2042 intronic 3.81 0 0,0,0 0 0,0,0 0 0 0 3.92537313432836 0 0 19.8751696065129 1.80803134182174 11.375 0 0 chimp,human,macaque,marmoset,orangutan, antisense antisense A549@0,AG04450@0.0174535,BJ@0,GM12878@0,H1HESC@0.013491,HELAS3@0.065801,HEPG2@0.023536,HMEC@0.011082,HSMM@0,HUVEC@0,K562@0.0794475,MCF7@0.12963,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000228705.1 ENST00000412500.1 chr20:61405480-61406764 2 538 744 intergenic 0.19 1 1,1,1 0 0,0,0 0 0 0 0 0 0 0 0 36.982 0 0 chimp,human,macaque,marmoset,orangutan, antisense antisense A549@0.095017,AG04450@0,BJ@0.0091185,GM12878@0.108817,H1HESC@0.191097,HELAS3@0.711527,HEPG2@0.981384,HMEC@0.151653,HSMM@0,HUVEC@0,K562@7.20653,MCF7@1.07735,NHEK@0.239505,NHLF@0.0071465,SKNSHRA@0.0084175, 0 0 0 0 ENSG00000229873.1 ENST00000431361.1 chr20:61431979-61436939 3 665 4291 intronic 3.86 1 1,1,1 0 0,0,0 0 0 0 0 6.96550920531345 0 0 11.1342344441855 177.469 0 0 cat,chimp,cow,elephant,human,macaque,marmoset,orangutan,panda, antisense antisense A549@0.0384005,AG04450@0.0312195,BJ@0.0767385,GM12878@0.0335825,H1HESC@0.036556,HELAS3@0.922068,HEPG2@5.04715,HMEC@0.079686,HSMM@0.0433655,HUVEC@0.169593,K562@0.0188455,MCF7@0.0244185,NHEK@0.0490293,NHLF@0.057997,SKNSHRA@0.027219, 0 0 0 0 ENSG00000250123.1 ENST00000515451.1 chr20:61601336-61604389 2 2316 735 intergenic 7.22 0 0,1,0 0 0,0,0 0 0 0 1.39637305699482 0 0 1.40112262521589 0 0 1 1 chimp,human,macaque,marmoset,orangutan, lincRNA lincRNA A549@0,AG04450@0.0051085,BJ@0.040859,GM12878@0.046483,H1HESC@0.005128,HELAS3@0.118848,HEPG2@0.141975,HMEC@0,HSMM@0,HUVEC@0.0107245,K562@0,MCF7@0.0468005,NHEK@0,NHLF@0.0355845,SKNSHRA@0, 0 0 0 0 ENSG00000203905.5 ENST00000370344.5 chr20:61640735-61716268 4 3249 72278 intergenic 5.10 0 0,1,0 1 0,1,0 0 0.8773624062647 0 0 3.07545864578433 2.893 0 14.7209109272531 6.649 0 1 chimp,human,orangutan, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0.320349,H1HESC@0.00368,HELAS3@0.0024475,HEPG2@0.0028035,HMEC@0,HSMM@0,HUVEC@0,K562@0.000714,MCF7@0.0062645,NHEK@0.000406,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000125514.5 ENST00000414668.1 chr20:61665569-61667748 4 1113 1060 intergenic 6.24 1 0,0,1 0 0,0,0 0 0 0 0 0 0 54.5309973045822 50.7311320754717 0 0 0 chimp,human,macaque,marmoset,orangutan, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0.001517,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0.001506,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000125514.5 ENST00000370341.3 chr20:61665569-61668380 3 1628 1179 intergenic 6.24 1 0,0,1 0 0,0,0 0 0 0 0 0 0 29.2536855036855 56.930449533503 93.316 0 0 chimp,human,macaque,orangutan, lincRNA non_coding A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0.001517,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0.001506,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000125514.5 ENST00000456634.1 chr20:61665735-61667705 2 631 1337 intergenic 6.24 0 0,0,1 0 0,0,0 0 0 0 0 0 0 3.08082408874802 58.1256544502618 0 0 0 chimp,human,macaque,marmoset,orangutan, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0.001517,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0.001506,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000237119.1 ENST00000455711.1 chr20:61669363-61685215 6 1228 14614 intergenic 2.20 1 0,0,1 0 0,0,0 0 0 0 0 4.1292596140687 0 10.4315960912052 23.1202956069522 88.681 0 0 chimp,human,macaque,orangutan, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0.0742495,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000231133.1 ENST00000447910.1 chr20:61727150-61733631 2 549 5930 intergenic 2.64 0 0,1,1 0 0,0,0 0 8.14502529510961 0 136.491803278689 7.90168634064081 0 207.103825136612 13.7023608768971 4.958 0 0 chimp,cow,horse,human,macaque,orangutan,rat, lincRNA processed_transcript A549@0.082787,AG04450@0.037349,BJ@0.124652,GM12878@0.0376,H1HESC@0,HELAS3@0.206826,HEPG2@0.0891095,HMEC@0.014863,HSMM@0.0124115,HUVEC@0,K562@0,MCF7@0.406918,NHEK@0.038146,NHLF@0.0351365,SKNSHRA@0.053594, 0 0 0 0 ENSG00000225978.1 ENST00000433161.1 chr20:61733557-61735738 2 1880 299 intergenic 14.09 1 0,1,1 0 0,0,0 0 0 0 18.5712765957447 0 40.388 25.7595744680851 0 61.11 0 0 chimp,human,orangutan, lincRNA processed_transcript A549@0.0285095,AG04450@0.0052665,BJ@0.0454405,GM12878@0.014074,H1HESC@0,HELAS3@0.007481,HEPG2@0.003444,HMEC@0.013054,HSMM@0.0024225,HUVEC@0.0057115,K562@0,MCF7@0.0310155,NHEK@0.0206003,NHLF@0.008214,SKNSHRA@0.0062575, 0 0 0 0 ENSG00000231977.1 ENST00000423020.1 chr20:61798149-61812255 2 540 13564 intergenic 9.56 0 0,0,0 0 0,0,0 0 29.3081686818048 0 0 41.9713948687703 0 0 44.9729430846358 0 0 0 chimp,human,macaque,marmoset,orangutan, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0.0086495,H1HESC@0.512954,HELAS3@0.0964775,HEPG2@0.016057,HMEC@0,HSMM@0.012208,HUVEC@0,K562@0.0100575,MCF7@0.011128,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000203900.2 ENST00000370257.1 chr20:61991340-62002529 5 3259 7922 intronic 5.44 0 0,1,0 0 0,0,0 0 0 24.158 3.99018103712795 6.6125978288311 63.423 16.3301626265726 16.9862408482706 91.866 0 0 chimp,human,marmoset,orangutan, lincRNA processed_transcript A549@0,AG04450@0,BJ@0,GM12878@0.001627,H1HESC@0.0418355,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0.0011465,HUVEC@0,K562@0,MCF7@0.007524,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000203900.2 ENST00000428531.1 chr20:62000234-62002524 3 510 1776 intronic 1.75 0 0,0,0 0 0,0,0 0 0 0 5.88235294117647 0 0 10.2705882352941 28.7877252252252 3.207 0 0 chimp,guinea_pig,horse,human,macaque,marmoset,orangutan, lincRNA processed_transcript A549@0,AG04450@0,BJ@0,GM12878@0.001627,H1HESC@0.0418355,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0.0011465,HUVEC@0,K562@0,MCF7@0.007524,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000226390.1 ENST00000436263.1 chr20:62079404-62080682 2 787 489 intronic 7.64 1 0,0,1 0 0,0,0 0 0 0 0 0 0 12.0419313850064 0 0 0 0 chimp,human,marmoset,orangutan, antisense antisense A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000230226.1 ENST00000458368.1 chr20:62133640-62136464 2 374 2448 intergenic -4.24 0 0,0,0 0 0,0,0 0 0 71.595 0 0 43.244 0 0.634803921568627 43.668 0 0 chimp,cow,dog,elephant,horse,human,macaque,marmoset,orangutan,panda,pig, antisense antisense A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0.006034, 0 0 0 0 ENSG00000232442.1 ENST00000449500.1 chr20:62258580-62260177 2 799 796 intergenic -2.07 0 1,1,1 1 0,0,0 0 0 26.1 0 0 184.743 41.476846057572 102.369346733668 210.525 0 0 chimp,human,macaque,marmoset,orangutan, antisense antisense A549@0.75468,AG04450@0.168834,BJ@0.231458,GM12878@0.88697,H1HESC@0.694136,HELAS3@1.32973,HEPG2@1.37909,HMEC@1.83506,HSMM@0.620401,HUVEC@0.71092,K562@1.69353,MCF7@1.29333,NHEK@0.797921,NHLF@0.291067,SKNSHRA@0.922537, 0 0 0 0 ENSG00000232442.1 ENST00000411579.1 chr20:62258603-62260060 2 580 875 intergenic 9.33 1 1,1,1 1 0,0,0 0 0 26.1 0 0 184.743 22.1862068965517 112.528 210.525 0 0 chimp,human,macaque,marmoset,orangutan, antisense antisense A549@0.75468,AG04450@0.168834,BJ@0.231458,GM12878@0.88697,H1HESC@0.694136,HELAS3@1.32973,HEPG2@1.37909,HMEC@1.83506,HSMM@0.620401,HUVEC@0.71092,K562@1.69353,MCF7@1.29333,NHEK@0.797921,NHLF@0.291067,SKNSHRA@0.922537, 0 0 0 0 ENSG00000229299.1 ENST00000447343.1 chr20:62376040-62377302 2 462 798 exonic 0 0 0,0,1 0 0,0,0 0 25.7568922305764 212.883 0 21.8834586466165 204.459 0 26.3709273182957 295.89 0 0 chimp,human,macaque,marmoset,orangutan, antisense antisense A549@0.115789,AG04450@0.0643305,BJ@0.0721025,GM12878@0.0875855,H1HESC@0.0358935,HELAS3@0.537486,HEPG2@0.497687,HMEC@0.017649,HSMM@0.072386,HUVEC@0.038741,K562@0.0811375,MCF7@0.262174,NHEK@0.0832257,NHLF@0.0384395,SKNSHRA@0.371173, 0 0 0 0 ENSG00000229299.1 ENST00000433905.1 chr20:62376897-62377309 2 264 146 exonic 0 0 0,1,1 0 0,0,0 0 0 35.336 0 0 33.211 0 0 48.417 0 0 chimp,human,macaque,orangutan, antisense antisense A549@0.115789,AG04450@0.0643305,BJ@0.0721025,GM12878@0.0875855,H1HESC@0.0358935,HELAS3@0.537486,HEPG2@0.497687,HMEC@0.017649,HSMM@0.072386,HUVEC@0.038741,K562@0.0811375,MCF7@0.262174,NHEK@0.0832257,NHLF@0.0384395,SKNSHRA@0.371173, 0 0 0 0 ENSG00000231208.2 ENST00000435912.1 chr20:62439429-62447874 3 530 7911 intronic 4.97 0 0,0,1 0 0,0,0 0 0 0 0 0 0 0 27.6214132220958 0 0 0 chimp,human,macaque,marmoset,orangutan, antisense antisense A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000196421.3 ENST00000444463.1 chr20:62665697-62670354 4 4299 352 intronic 28.29 1 0,0,1 0 0,0,0 12.5329146313096 0 0 24.8220516399163 3.67897727272727 0 26.6278204233543 6.61079545454545 0 0 0 chimp,human,macaque,orangutan, lincRNA processed_transcript A549@0.130437,AG04450@0.065045,BJ@0.0698685,GM12878@1.45488,H1HESC@0.149199,HELAS3@0.826874,HEPG2@4.61421,HMEC@0.013322,HSMM@0.0723705,HUVEC@0.683457,K562@0.109563,MCF7@0.482266,NHEK@0.0844097,NHLF@0.0144685,SKNSHRA@0.170108, 0 0 0 0 ENSG00000196421.3 ENST00000431158.1 chr20:62667016-62670354 3 2951 383 exonic 21.22 1 1,1,1 0 0,0,0 18.2578786851915 0 0 28.9559471365639 59.5169712793734 0 20.4347678752965 61.1383812010444 33.602 0 0 chimp,human,macaque,marmoset,orangutan, lincRNA processed_transcript A549@0.130437,AG04450@0.065045,BJ@0.0698685,GM12878@1.45488,H1HESC@0.149199,HELAS3@0.826874,HEPG2@4.61421,HMEC@0.013322,HSMM@0.0723705,HUVEC@0.683457,K562@0.109563,MCF7@0.482266,NHEK@0.0844097,NHLF@0.0144685,SKNSHRA@0.170108, 0 0 0 0 ENSG00000196421.3 ENST00000463337.1 chr20:62669485-62671315 2 1410 418 intronic 21.22 0 0,1,0 1 0,0,0 82.3404255319149 0 0 52.1822695035461 56.2488038277512 15.67 39.7425531914894 56.6004784688995 13.103 0 0 cat,chimp,cow,dog,guinea_pig,horse,human,marmoset, lincRNA processed_transcript A549@0.130437,AG04450@0.065045,BJ@0.0698685,GM12878@1.45488,H1HESC@0.149199,HELAS3@0.826874,HEPG2@4.61421,HMEC@0.013322,HSMM@0.0723705,HUVEC@0.683457,K562@0.109563,MCF7@0.482266,NHEK@0.0844097,NHLF@0.0144685,SKNSHRA@0.170108, 0 0 0 0 ENSG00000196421.3 ENST00000358393.1 chr20:62669493-62671131 2 1464 172 intronic 28.29 0 1,1,1 1 0,0,0 79.3032786885246 0 0 64.8825136612022 4.16860465116279 17.104 54.1290983606557 4.23837209302326 13.103 0 0 cat,chimp,cow,dog,horse,human,macaque,marmoset,orangutan,rabbit, lincRNA processed_transcript A549@0.130437,AG04450@0.065045,BJ@0.0698685,GM12878@1.45488,H1HESC@0.149199,HELAS3@0.826874,HEPG2@4.61421,HMEC@0.013322,HSMM@0.0723705,HUVEC@0.683457,K562@0.109563,MCF7@0.482266,NHEK@0.0844097,NHLF@0.0144685,SKNSHRA@0.170108, 0 0 0 0 ENSG00000237371.1 ENST00000455524.1 chr20:62688156-62688437 2 186 93 intergenic 0 0 0,1,0 1 0,0,0 0 0 90.288 0 0 107.993 0 0 114.2 0 0 chimp,human,macaque,marmoset,orangutan, antisense antisense A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000229306.1 ENST00000457565.1 chr21:14371997-14389013 2 321 16693 intergenic -17.43 1 0,0,0 0 0,0,0 0 0 0 0 0 0 0 1.6330198286707 0 0 0 chimp,human,macaque,marmoset,orangutan, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 178 2 0 0 ENSG00000228159.1 ENST00000427446.1 chr21:14918354-14930782 4 500 11922 intergenic -8.41 0 0,0,0 0 0,0,0 0 0 0 0 0 0 0 3.56441872169099 6.318 0 0 chimp,cow,elephant,horse,human,macaque,marmoset,orangutan,pig, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000224922.1 ENST00000444356.1 chr21:15142253-15144061 2 456 1350 intergenic 0.40 0 0,0,0 0 0,0,0 0 0 0 0 22.0666666666667 180.678 0 31.9977777777778 189.53 0 0 chimp,cow,human,macaque,marmoset,orangutan, lincRNA lincRNA A549@0.0147275,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0.0221475,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000224905.2 ENST00000428809.1 chr21:15399742-15516789 3 1329 115714 intronic 6.42 1 1,1,1 1 0,0,0 0 0.111049656912733 0 0 3.48126415126951 0 0 23.9033219835111 0 0 0 cat,chimp,cow,dog,elephant,guinea_pig,horse,human,macaque,marmoset,mouse,opossum,orangutan,panda,pig,rabbit,rat, processed_transcript processed_transcript A549@0.244903,AG04450@0.222606,BJ@0.341075,GM12878@2.02759,H1HESC@1.95809,HELAS3@0.635876,HEPG2@0.417642,HMEC@0.153293,HSMM@0.620785,HUVEC@0.065307,K562@0.383623,MCF7@0.0506635,NHEK@0.17266,NHLF@0.086232,SKNSHRA@0.268481, 0 0 0 0 ENSG00000224905.2 ENST00000432621.1 chr21:15399742-15516789 3 1081 115962 intronic 6.42 1 1,1,1 1 0,0,0 0 0.110812162604991 0 0 3.47381900967558 0 0 23.8522015832773 0 0 0 cat,chimp,elephant,guinea_pig,horse,human,marmoset,mouse,orangutan,rabbit,rat, processed_transcript processed_transcript A549@0.244903,AG04450@0.222606,BJ@0.341075,GM12878@2.02759,H1HESC@1.95809,HELAS3@0.635876,HEPG2@0.417642,HMEC@0.153293,HSMM@0.620785,HUVEC@0.065307,K562@0.383623,MCF7@0.0506635,NHEK@0.17266,NHLF@0.086232,SKNSHRA@0.268481, 0 0 0 0 ENSG00000224905.2 ENST00000448463.1 chr21:15399772-15461367 3 777 60814 intergenic 6.42 0 1,1,1 1 0,0,0 0 0 0 0 0 0 0 37.8769197882067 0 0 0 chimp,dog,human,macaque,marmoset,orangutan, processed_transcript processed_transcript A549@0.244903,AG04450@0.222606,BJ@0.341075,GM12878@2.02759,H1HESC@1.95809,HELAS3@0.635876,HEPG2@0.417642,HMEC@0.153293,HSMM@0.620785,HUVEC@0.065307,K562@0.383623,MCF7@0.0506635,NHEK@0.17266,NHLF@0.086232,SKNSHRA@0.268481, 0 0 0 0 ENSG00000215557.2 ENST00000429114.1 chr21:15608527-15651978 5 606 42837 intergenic -4.65 0 0,0,0 0 0,1,0 14.5924092409241 0.941919368769989 0 36.2211221122112 1.12472862245255 0 42.2772277227723 1.76307864696407 17.457 0 0 cat,chimp,cow,dog,elephant,horse,human,macaque,marmoset,orangutan,panda,pig,rabbit, processed_transcript processed_transcript A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0.001192,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0.0247865,MCF7@0.142098,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000215557.2 ENST00000400570.1 chr21:15646120-15663697 5 798 16771 intergenic -4.84 0 0,1,0 0 0,1,0 30.5100250626566 4.12128078230278 0 113.616541353383 9.67664420726254 0 151.397243107769 11.7816468904657 0 0 0 chimp,horse,human,macaque,marmoset,orangutan,pig,rabbit, processed_transcript processed_transcript A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0.001192,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0.0247865,MCF7@0.142098,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000215557.2 ENST00000400572.1 chr21:15646120-15673690 6 2816 24744 intergenic -4.11 0 0,1,0 0 0,1,0 52.3025568181818 2.87746524409958 0 70.7049005681818 6.8667151632719 0 103.498579545455 8.49741351438733 0 0 0 chimp,cow,horse,human,macaque,marmoset,orangutan,panda,pig, processed_transcript processed_transcript A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0.001192,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0.0247865,MCF7@0.142098,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000215557.2 ENST00000400574.2 chr21:15646120-15685346 9 1262 37948 intergenic -4.84 0 0,1,0 0 0,1,0 110.10618066561 5.33680299357015 0 183.396988906498 10.2662063876884 0 250.996038034865 15.3532465479077 0 0 0 chimp,cow,dog,elephant,horse,human,macaque,marmoset,orangutan,panda,pig,platypus,rabbit, processed_transcript processed_transcript A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0.001192,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0.0247865,MCF7@0.142098,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000215557.2 ENST00000400571.1 chr21:15646413-15673690 6 2436 24831 intergenic -4.11 0 0,1,0 0 0,1,0 56.8312807881773 3.23313599935564 0 72.7237274220033 7.74431154605131 0 108.727422003284 9.53235874511699 0.729 0 0 chimp,cow,dog,horse,human,macaque,marmoset,orangutan,panda,pig, processed_transcript processed_transcript A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0.001192,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0.0247865,MCF7@0.142098,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000242342.1 ENST00000470891.1 chr21:15764891-15765753 2 186 674 intergenic 0 0 0,0,1 0 0,0,0 0 0 0 0 0 0 0 0 0 0 0 NA lincRNA lincRNA A549@0.011546,AG04450@0,BJ@0,GM12878@0.077492,H1HESC@0,HELAS3@0.0729385,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0.104727,MCF7@0.0109365,NHEK@0.0552503,NHLF@0,SKNSHRA@0.0120895, 0 0 0 0 ENSG00000223662.1 ENST00000449214.1 chr21:15954523-15970624 5 835 15258 exonic -0.22 0 0,1,0 0 0,0,0 67.1473053892216 2.11305544632324 14.28 98.7317365269461 9.52536374360991 21.429 109.746107784431 12.1234762092017 21.016 0 0 chimp,dog,horse,human,macaque,marmoset,mouse,orangutan,panda,pig,rabbit,rat, antisense antisense A549@0,AG04450@0,BJ@0,GM12878@0.0103805,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0.177421,HSMM@0,HUVEC@0,K562@0.262055,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000232884.1 ENST00000454128.1 chr21:16120066-16125782 3 813 4899 intergenic -6.40 0 0,1,0 0 0,0,0 0 41.2373953868136 0 7.73431734317343 40.4694835680751 0 12.489544895449 45.375995101041 0 0 0 chimp,dog,human,macaque,marmoset,orangutan, lincRNA lincRNA A549@0.010382,AG04450@0,BJ@0.003257,GM12878@0.110367,H1HESC@0,HELAS3@0.005618,HEPG2@0.01843,HMEC@0,HSMM@0,HUVEC@0,K562@1.51864,MCF7@0.002706,NHEK@0,NHLF@0,SKNSHRA@0.0030535, 0 0 0 0 ENSG00000232884.1 ENST00000455253.1 chr21:16120066-16126186 3 740 5376 intergenic -6.40 0 0,1,0 0 0,0,0 0 37.5784970238095 0 8.4972972972973 36.8787202380952 0 13.7216216216216 41.3498883928571 0 0 0 chimp,dog,guinea_pig,human,macaque,marmoset,orangutan, lincRNA lincRNA A549@0.010382,AG04450@0,BJ@0.003257,GM12878@0.110367,H1HESC@0,HELAS3@0.005618,HEPG2@0.01843,HMEC@0,HSMM@0,HUVEC@0,K562@1.51864,MCF7@0.002706,NHEK@0,NHLF@0,SKNSHRA@0.0030535, 0 0 0 0 ENSG00000226751.1 ENST00000435315.1 chr21:16134031-16135411 2 693 685 intergenic -0.48 0 0,1,1 0 0,0,0 16.5541125541126 26.8656934306569 0 22.1024531024531 32.0554744525547 2.295 22.2150072150072 32.1007299270073 2.65 0 0 chimp,dog,elephant,guinea_pig,horse,human,macaque,marmoset,mouse,orangutan,panda,rat, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0.071607,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0.003341,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000235609.1 ENST00000432230.1 chr21:16195290-16230029 3 1713 33022 intergenic -0.37 0 0,0,0 0 0,0,0 4.88032691185055 10.377172793895 43.146 31.2521891418564 14.0545091151354 62.684 38.1967308814944 22.0898189086064 65.554 0 0 chimp,cow,dog,elephant,guinea_pig,horse,human,macaque,marmoset,mouse,orangutan,panda,pig,rabbit, processed_transcript processed_transcript A549@1.79309,AG04450@1.25027,BJ@0.833525,GM12878@0.500765,H1HESC@0.223085,HELAS3@1.36205,HEPG2@1.71595,HMEC@0.217223,HSMM@0.766846,HUVEC@0.409506,K562@0.240208,MCF7@1.30423,NHEK@0.508161,NHLF@0.42717,SKNSHRA@2.79026, 0 0 0 0 ENSG00000235609.1 ENST00000412426.1 chr21:16209503-16254231 4 987 43735 intergenic -5.72 0 0,0,0 0 0,0,0 86.3627152988855 22.0744255173202 15.376 188.974670719352 25.6481765176632 0.956 198.432624113475 29.8065165199497 1.004 0 0 chimp,elephant,guinea_pig,horse,human,macaque,marmoset,orangutan,pig,platypus, processed_transcript processed_transcript A549@1.79309,AG04450@1.25027,BJ@0.833525,GM12878@0.500765,H1HESC@0.223085,HELAS3@1.36205,HEPG2@1.71595,HMEC@0.217223,HSMM@0.766846,HUVEC@0.409506,K562@0.240208,MCF7@1.30423,NHEK@0.508161,NHLF@0.42717,SKNSHRA@2.79026, 0 0 0 0 ENSG00000235609.1 ENST00000418954.1 chr21:16225292-16254296 3 714 28286 intergenic -0.18 0 0,0,0 0 0,0,0 0 30.2742699568691 15.376 0 33.5300502015131 0.956 0 33.8791981899173 1.004 0 0 chimp,dog,human,macaque,marmoset,orangutan, processed_transcript processed_transcript A549@1.79309,AG04450@1.25027,BJ@0.833525,GM12878@0.500765,H1HESC@0.223085,HELAS3@1.36205,HEPG2@1.71595,HMEC@0.217223,HSMM@0.766846,HUVEC@0.409506,K562@0.240208,MCF7@1.30423,NHEK@0.508161,NHLF@0.42717,SKNSHRA@2.79026, 0 0 0 0 ENSG00000235277.1 ENST00000430391.1 chr21:16290855-16319417 2 779 27781 intergenic -2.36 0 0,1,0 0 0,0,0 89.6534017971759 10.7133292538066 26.16 75.2836970474968 13.1070515820165 2.375 75.8575096277279 15.2686008423023 5.893 0 0 chimp,human,macaque,marmoset,orangutan, antisense antisense A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0.0076105,HELAS3@0,HEPG2@0,HMEC@0.03578,HSMM@0,HUVEC@0,K562@0,MCF7@0.814986,NHEK@0.003269,NHLF@0,SKNSHRA@0.0650345, 0 0 0 0 ENSG00000229047.1 ENST00000446301.1 chr21:16333630-16336554 2 560 2362 exonic -2.65 0 0,1,0 0 0,0,0 371.748214285714 325.389923793395 49.401 437.535714285714 387.241744284505 64.362 472.125 380.922523285351 68.748 0 0 cat,chimp,cow,dog,elephant,guinea_pig,horse,human,macaque,marmoset,mouse,opossum,orangutan,panda,platypus,rabbit,rat, antisense antisense A549@0.188792,AG04450@0.0965585,BJ@0.0130675,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0.0535575,HMEC@0,HSMM@0,HUVEC@0.019006,K562@0.055213,MCF7@0.007155,NHEK@0.0252187,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000231201.1 ENST00000436429.1 chr21:16343791-16365175 3 821 20559 intronic -8.20 0 0,0,0 0 0,0,0 0 9.87747458533975 16.368 0 19.5939977625371 0 0 21.7259594338246 0 0 0 chimp,elephant,guinea_pig,human,macaque,marmoset,mouse,orangutan, antisense antisense A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0.012577,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000236471.1 ENST00000449746.1 chr21:16439391-16440158 2 444 321 intergenic 0 0 0,0,1 0 0,0,0 62.0540540540541 54.1993769470405 21.389 40.8243243243243 22.2367601246106 58.679 56.3671171171171 23.380062305296 68.922 0 0 chimp,dog,human,macaque,marmoset,orangutan,panda, lincRNA lincRNA A549@0.03318,AG04450@0.0050255,BJ@0.0110405,GM12878@0.010511,H1HESC@0.0178405,HELAS3@0.0209615,HEPG2@0.0338445,HMEC@0,HSMM@0.0245605,HUVEC@0,K562@0.0928155,MCF7@0.304474,NHEK@0,NHLF@0.034659,SKNSHRA@0.0060305, 0 0 0 0 ENSG00000229425.1 ENST00000449602.1 chr21:16742841-16774624 7 993 30778 intergenic 1.07 0 0,0,1 0 0,0,0 16.012084592145 5.54379751770745 7.7 0.582074521651561 6.49061017609981 2.484 3.5448136958711 17.6923776723634 2.84 0 0 cat,chimp,dog,elephant,guinea_pig,horse,human,macaque,marmoset,mouse,orangutan,panda, lincRNA lincRNA A549@0.637911,AG04450@0.0044825,BJ@0,GM12878@0,H1HESC@0.061596,HELAS3@0.514942,HEPG2@8.3142,HMEC@0,HSMM@0.004337,HUVEC@0,K562@0,MCF7@0.0121995,NHEK@0,NHLF@0,SKNSHRA@0.0045375, 0 0 0 0 ENSG00000224247.1 ENST00000433588.1 chr21:16866251-16868443 2 1374 816 intergenic 2.79 0 0,1,0 0 0,0,0 0 0 0 50.5836972343523 0 2.723 57.9978165938865 0 2.735 0 0 cat,chimp,cow,elephant,horse,human,macaque,marmoset,orangutan,panda,pig, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0.008223,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0.008495,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000215386.5 ENST00000458468.1 chr21:17442842-17982094 8 3467 535771 intergenic 2.36 0 0,1,1 0 0,1,0 87.4903374675512 25.0423128538126 269.28 109.105566772426 26.5155990152509 240.954 115.567349293337 30.3892969197661 253.098 0 0 cat,chimp,dog,elephant,horse,human,macaque,marmoset,orangutan,panda, lincRNA processed_transcript A549@0.907075,AG04450@0.756451,BJ@0.406696,GM12878@0.0139125,H1HESC@0.03596,HELAS3@4.36522,HEPG2@0.906555,HMEC@0.028909,HSMM@0.669131,HUVEC@2.07499,K562@0,MCF7@0.431374,NHEK@0.0567947,NHLF@0.171525,SKNSHRA@1.96385, 0 0 0 0 ENSG00000215386.5 ENST00000400178.2 chr21:17443434-17979450 6 694 535312 intergenic 2.36 1 0,0,1 0 0,1,0 313.054755043228 24.3081698149864 722.16 343.089337175793 25.9939605314284 565.339 356.876080691643 29.8647237498879 551.179 0 0 cat,chimp,cow,dog,elephant,guinea_pig,horse,human,macaque,marmoset,mouse,orangutan,panda,pig,rabbit,rat, lincRNA processed_transcript A549@0.907075,AG04450@0.756451,BJ@0.406696,GM12878@0.0139125,H1HESC@0.03596,HELAS3@4.36522,HEPG2@0.906555,HMEC@0.028909,HSMM@0.669131,HUVEC@2.07499,K562@0,MCF7@0.431374,NHEK@0.0567947,NHLF@0.171525,SKNSHRA@1.96385, 0 0 0 0 ENSG00000215386.5 ENST00000456342.1 chr21:17443553-17979456 7 641 535250 intergenic 2.36 1 0,0,1 0 0,1,0 237.636505460218 24.2605978514713 765 279.730109204368 25.9305987856142 637.528 291.219968798752 29.8021578701541 626.961 0 0 cat,chimp,cow,dog,elephant,guinea_pig,horse,human,macaque,marmoset,mouse,orangutan,panda,pig,rabbit,rat, lincRNA processed_transcript A549@0.907075,AG04450@0.756451,BJ@0.406696,GM12878@0.0139125,H1HESC@0.03596,HELAS3@4.36522,HEPG2@0.906555,HMEC@0.028909,HSMM@0.669131,HUVEC@2.07499,K562@0,MCF7@0.431374,NHEK@0.0567947,NHLF@0.171525,SKNSHRA@1.96385, 0 0 0 0 ENSG00000215386.5 ENST00000419952.1 chr21:17566699-17894124 5 517 326900 intergenic -3.77 0 0,1,0 0 0,1,0 310.990328820116 17.3475833588253 244.338 267.688588007737 19.7746069134292 157.838 278.230174081238 23.1450260018354 184.355 0 0 chimp,cow,elephant,guinea_pig,horse,human,macaque,marmoset,mouse,orangutan,panda,pig,rabbit,rat, lincRNA processed_transcript A549@0.907075,AG04450@0.756451,BJ@0.406696,GM12878@0.0139125,H1HESC@0.03596,HELAS3@4.36522,HEPG2@0.906555,HMEC@0.028909,HSMM@0.669131,HUVEC@2.07499,K562@0,MCF7@0.431374,NHEK@0.0567947,NHLF@0.171525,SKNSHRA@1.96385, 0 0 0 0 ENSG00000215386.5 ENST00000445461.1 chr21:17566788-17979542 6 631 412113 intergenic 2.36 1 0,1,1 0 0,1,0 206.88589540412 27.1011834132871 300.675 222.754358161648 28.3503529371798 190.055 231.774960380349 30.9210896040649 216.415 0 0 cat,chimp,cow,dog,elephant,guinea_pig,horse,human,macaque,marmoset,mouse,orangutan,pig,rabbit,rat, lincRNA processed_transcript A549@0.907075,AG04450@0.756451,BJ@0.406696,GM12878@0.0139125,H1HESC@0.03596,HELAS3@4.36522,HEPG2@0.906555,HMEC@0.028909,HSMM@0.669131,HUVEC@2.07499,K562@0,MCF7@0.431374,NHEK@0.0567947,NHLF@0.171525,SKNSHRA@1.96385, 0 0 0 0 ENSG00000215386.5 ENST00000428669.1 chr21:17763934-17979438 5 417 215079 intergenic 2.36 1 0,0,1 0 0,1,0 62.589928057554 34.5552099461128 9.799 141.601918465228 34.2246197908676 6.757 143.988009592326 35.2393632107272 7.29 0 0 cat,chimp,cow,dog,elephant,guinea_pig,horse,human,macaque,marmoset,orangutan,panda,pig,rabbit, lincRNA processed_transcript A549@0.907075,AG04450@0.756451,BJ@0.406696,GM12878@0.0139125,H1HESC@0.03596,HELAS3@4.36522,HEPG2@0.906555,HMEC@0.028909,HSMM@0.669131,HUVEC@2.07499,K562@0,MCF7@0.431374,NHEK@0.0567947,NHLF@0.171525,SKNSHRA@1.96385, 0 0 0 0 ENSG00000215386.5 ENST00000435697.1 chr21:17791752-17860215 2 714 67747 intergenic -5.80 0 0,1,0 0 0,1,0 278.705882352941 19.9039219448832 180.32 409.299719887955 20.173616543906 194.121 368.464985994398 22.2306079974021 173.67 0 0 cat,chimp,cow,dog,elephant,guinea_pig,horse,human,macaque,marmoset,mouse,orangutan,panda,pig,rabbit,rat, lincRNA processed_transcript A549@0.907075,AG04450@0.756451,BJ@0.406696,GM12878@0.0139125,H1HESC@0.03596,HELAS3@4.36522,HEPG2@0.906555,HMEC@0.028909,HSMM@0.669131,HUVEC@2.07499,K562@0,MCF7@0.431374,NHEK@0.0567947,NHLF@0.171525,SKNSHRA@1.96385, 0 0 0 0 ENSG00000215386.5 ENST00000453910.1 chr21:17791838-17979423 5 554 187023 intergenic 2.36 1 1,1,1 0 0,1,0 306.339350180505 37.4326794030681 235.704 372.036101083033 36.517872133374 238.251 317.095667870036 37.8151992000984 219.072 0 0 cat,chimp,cow,dog,elephant,guinea_pig,horse,human,macaque,marmoset,mouse,orangutan,panda,pig,rabbit,rat, lincRNA processed_transcript A549@0.907075,AG04450@0.756451,BJ@0.406696,GM12878@0.0139125,H1HESC@0.03596,HELAS3@4.36522,HEPG2@0.906555,HMEC@0.028909,HSMM@0.669131,HUVEC@2.07499,K562@0,MCF7@0.431374,NHEK@0.0567947,NHLF@0.171525,SKNSHRA@1.96385, 0 0 0 0 ENSG00000215386.5 ENST00000418813.1 chr21:17791999-17979404 4 260 187139 intergenic 0 1 1,1,1 0 0,1,0 253.953846153846 37.4094763785208 339.388 336.630769230769 36.5593703076323 344.833 333.123076923077 37.8623910569149 294.517 0 0 cat,chimp,cow,dog,elephant,guinea_pig,horse,human,macaque,marmoset,mouse,orangutan,panda,pig,rabbit,rat, lincRNA processed_transcript A549@0.907075,AG04450@0.756451,BJ@0.406696,GM12878@0.0139125,H1HESC@0.03596,HELAS3@4.36522,HEPG2@0.906555,HMEC@0.028909,HSMM@0.669131,HUVEC@2.07499,K562@0,MCF7@0.431374,NHEK@0.0567947,NHLF@0.171525,SKNSHRA@1.96385, 0 0 0 0 ENSG00000215386.5 ENST00000441820.1 chr21:17909601-17979569 3 527 69437 intergenic 2.36 0 0,1,1 0 0,1,0 113.083491461101 59.6942408226162 247.783 142.343453510436 55.7989256448292 240.194 143.045540796964 54.0425133574319 239.054 0 0 cat,chimp,cow,dog,elephant,guinea_pig,horse,human,macaque,marmoset,mouse,orangutan,pig,rabbit,rat, lincRNA processed_transcript A549@0.907075,AG04450@0.756451,BJ@0.406696,GM12878@0.0139125,H1HESC@0.03596,HELAS3@4.36522,HEPG2@0.906555,HMEC@0.028909,HSMM@0.669131,HUVEC@2.07499,K562@0,MCF7@0.431374,NHEK@0.0567947,NHLF@0.171525,SKNSHRA@1.96385, 0 0 0 0 ENSG00000228798.1 ENST00000413645.1 chr21:18003146-18012952 2 548 9256 intergenic -4.68 0 0,0,1 0 0,0,0 0 32.2182368193604 0 0 31.7260155574762 0 0 34.5612575626621 0 0 0 chimp,human,macaque,marmoset,orangutan, lincRNA lincRNA A549@0.093039,AG04450@0.004456,BJ@0.062068,GM12878@0.0219955,H1HESC@0,HELAS3@1.63769,HEPG2@0.471796,HMEC@0,HSMM@0.116789,HUVEC@1.16663,K562@0,MCF7@0.053505,NHEK@0.00480067,NHLF@0.0035475,SKNSHRA@0.239311, 0 0 0 0 ENSG00000228798.1 ENST00000438762.1 chr21:18003760-18013002 2 501 8739 intergenic -0.34 0 0,0,1 0 0,0,0 0 34.1242705115002 0 0 33.6029293969562 0 0 36.6059045657398 0 0 0 chimp,cow,dog,horse,human,macaque,marmoset,orangutan,panda, lincRNA lincRNA A549@0.093039,AG04450@0.004456,BJ@0.062068,GM12878@0.0219955,H1HESC@0,HELAS3@1.63769,HEPG2@0.471796,HMEC@0,HSMM@0.116789,HUVEC@1.16663,K562@0,MCF7@0.053505,NHEK@0.00480067,NHLF@0.0035475,SKNSHRA@0.239311, 0 0 0 0 ENSG00000237735.1 ENST00000444868.1 chr21:18126838-18188007 3 434 60731 intergenic -0.70 0 0,1,0 0 0,0,0 0 21.2374240503203 0 0 22.9727157464886 0 0 23.7972534619881 0 0 0 chimp,human,macaque,marmoset,orangutan, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0.00941,NHEK@0.0147583,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000232886.1 ENST00000430064.1 chr21:18235195-18246011 4 373 10437 intergenic 0.34 1 0,0,0 0 0,0,0 88.4611260053619 45.471783079429 238.35 117.603217158177 44.3907253042062 132.929 117.914209115282 47.1174667049919 133.062 0 0 cat,chimp,cow,dog,elephant,guinea_pig,horse,human,macaque,marmoset,mouse,orangutan,panda,rabbit,rat, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0.0054535,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000226956.1 ENST00000416641.1 chr21:19031594-19032702 2 514 592 intergenic -3.80 0 0,0,0 0 0,0,0 0 0 260.362 0 0 302.935 5.20038910505837 0 301.331 0 0 chimp,human,macaque,orangutan, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000244676.1 ENST00000454737.1 chr21:19181262-19183162 2 381 1517 intronic -8.84 1 0,0,1 0 0,0,0 0 0 0 0 0 0 0 3.36387607119314 0 0 0 chimp,horse,human,macaque,marmoset,orangutan,panda,pig,rabbit, processed_transcript processed_transcript A549@0,AG04450@0,BJ@0,GM12878@0.0492285,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0.0191155,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000231755.1 ENST00000447175.1 chr21:19207333-19257925 3 1114 49474 intronic -2.75 1 0,0,0 0 0,0,0 0 2.29813639487408 0 0 4.69133282127986 0 0 11.7716578404819 0 0 0 chimp,human,macaque,marmoset,orangutan, lincRNA non_coding A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0.002376,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0.00472767,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000227330.1 ENST00000432412.1 chr21:19394687-19487222 5 473 92054 intronic 3.20 0 0,0,0 0 0,0,0 0 5.92403371933865 0 0 9.61563864688118 2.104 0 11.1571360288526 2.12 0 0 chimp,cow,elephant,horse,human,macaque,marmoset,orangutan,panda,rabbit, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000228708.1 ENST00000455391.1 chr21:19849676-19858917 2 459 8780 intronic 3.08 0 0,0,0 0 0,0,0 0 1.40444191343964 0 0 3.56913439635535 0 0 3.80728929384966 0 0 0 chimp,human,macaque,marmoset,orangutan,pig, processed_transcript processed_transcript A549@0,AG04450@0,BJ@0,GM12878@0.0171825,H1HESC@0,HELAS3@0.123243,HEPG2@0.024813,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000224141.1 ENST00000437492.1 chr21:19933583-20132321 4 849 197883 intergenic 1.82 1 0,1,0 0 0,0,0 0 8.27589029881293 0 0 9.67718803535423 0 0 13.0649626294325 0 0 0 human, lincRNA processed_transcript A549@0.134234,AG04450@0,BJ@0,GM12878@2.16485,H1HESC@0,HELAS3@0.002649,HEPG2@0.0044355,HMEC@0,HSMM@0,HUVEC@0,K562@0.316305,MCF7@0.0454065,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000224141.1 ENST00000355189.3 chr21:19933933-20132122 5 668 197513 intergenic 0.69 0 0,0,0 0 0,0,0 0 8.29139347789766 0 0 9.69531625766405 0 0 13.0894371509723 0 0 0 chimp,human,orangutan, lincRNA processed_transcript A549@0.134234,AG04450@0,BJ@0,GM12878@2.16485,H1HESC@0,HELAS3@0.002649,HEPG2@0.0044355,HMEC@0,HSMM@0,HUVEC@0,K562@0.316305,MCF7@0.0454065,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000224141.1 ENST00000414582.1 chr21:19984380-20125346 3 612 140350 intergenic 0.69 0 0,0,0 0 0,0,0 0 8.98145350908443 0 0 10.7673245457784 0 0 14.5955468471678 0 0 0 chimp,human,macaque,marmoset,orangutan, lincRNA processed_transcript A549@0.134234,AG04450@0,BJ@0,GM12878@2.16485,H1HESC@0,HELAS3@0.002649,HEPG2@0.0044355,HMEC@0,HSMM@0,HUVEC@0,K562@0.316305,MCF7@0.0454065,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000230233.1 ENST00000416002.1 chr21:19986749-20022678 3 876 35049 intergenic -3.31 0 0,0,0 0 0,0,0 57.7625570776256 8.6000171188907 53.36 50.7168949771689 8.76712602356701 54.813 69.2431506849315 11.663328482981 54.212 0 0 chimp,cow,dog,elephant,guinea_pig,horse,human,macaque,marmoset,mouse,orangutan,rabbit,rat, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0.0022935,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000232193.1 ENST00000440372.1 chr21:20290252-20308177 2 782 17141 intergenic 4.24 0 0,0,1 0 0,0,0 0 12.1089201330144 48.96 0 8.91167376465784 101.725 0 9.08809287672831 102.128 0 0 cat,chimp,dog,elephant,guinea_pig,horse,human,macaque,marmoset,orangutan,panda,rabbit, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0.017917,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000226204.1 ENST00000449840.1 chr21:20325582-20339376 2 422 13370 intergenic -7.74 1 0,0,0 0 0,0,0 0 14.9708302169035 0 0 27.2801795063575 0 0 28.1326103216155 0 0 0 cat,chimp,dog,elephant,human,macaque,marmoset,orangutan,panda,rabbit, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000235965.1 ENST00000450653.1 chr21:20418629-20420003 2 788 584 intergenic -4.56 0 0,0,0 0 0,0,0 169.908629441624 0 149.055 183.611675126904 0 167.915 189.052030456853 0 170.026 0 0 cat,chimp,cow,dog,elephant,guinea_pig,horse,human,macaque,marmoset,mouse,orangutan,panda,pig,rabbit,rat, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0.16533,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000229289.1 ENST00000424219.1 chr21:20502841-20506741 2 467 3431 intergenic 6.68 0 0,0,0 0 0,0,0 0 0 0 0 0.722821334887788 0 0 0.754881958612649 0 0 0 chimp,human,macaque,marmoset,orangutan, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@8.63223,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000231620.1 ENST00000433210.1 chr21:20673930-20676056 2 634 1490 intergenic -1.55 1 0,0,0 0 0,0,0 0 0 15.37 7.66561514195584 0 3.312 7.89274447949527 0 3.408 0 0 cat,chimp,cow,dog,guinea_pig,horse,human,macaque,marmoset,orangutan,panda,pig,rabbit,rat, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000233480.1 ENST00000443479.1 chr21:21265593-21272069 3 409 6063 intergenic 5.13 0 0,0,0 0 0,0,0 0 0 0 0 0 0 0 0 0 0 0 cat,chimp,cow,horse,human,macaque,marmoset,orangutan, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0.0195715,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0.035768,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000233236.1 ENST00000436373.1 chr21:21629065-21631133 2 862 1204 intergenic -1.17 0 0,0,0 0 0,0,0 0 0 0 0 0 0 0 0 0 0 0 chimp,human,marmoset,orangutan, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@3.81325,H1HESC@0,HELAS3@0.0737795,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0.050906,K562@4.44394,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000224924.1 ENST00000416768.1 chr21:22114908-22175381 7 1843 58618 intergenic 3.16 0 0,0,0 0 0,0,0 34.4487249050461 9.75270394759289 0 24.8882257189365 9.91813094953769 3.346 28.7580032555616 13.3796615374117 3.514 0 0 chimp,dog,guinea_pig,horse,human,macaque,marmoset,orangutan,pig,rabbit, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000224924.1 ENST00000437238.1 chr21:22114913-22175416 8 1996 58493 intergenic 3.16 0 0,0,0 0 0,0,0 31.8081162324649 9.77354555245927 0 22.9804609218437 9.93932607320534 3.346 26.5536072144289 13.4082539791086 3.514 0 0 chimp,dog,human,macaque,marmoset,orangutan,pig,rabbit, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000224924.1 ENST00000452561.1 chr21:22115239-22175388 8 1753 58382 intergenic 2.92 1 0,0,0 0 0,0,0 39.9013120365088 9.02072556609914 0 32.6748431260696 9.46706176561269 3.346 34.0827153451227 12.9336268027817 3.514 0 0 chimp,guinea_pig,horse,human,macaque,marmoset,orangutan,rabbit, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000224924.1 ENST00000435279.1 chr21:22115239-22175426 7 1618 58557 intergenic 0.14 1 0,0,0 0 0,0,0 15.9116192830655 9.76286353467562 0 18.1730531520396 9.92846286524241 3.346 19.3794808405439 13.3935993988763 3.514 0 0 chimp,cow,dog,human,macaque,marmoset,orangutan, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000224924.1 ENST00000419299.1 chr21:22116057-22175404 7 822 58513 intergenic 3.16 0 0,0,0 0 0,0,0 0 9.77020491172902 0 0 9.93592876796609 3.346 0 13.4036709790987 3.514 0 0 chimp,human,macaque,orangutan, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000226771.1 ENST00000425058.1 chr21:22595616-22599150 2 633 2899 intronic -4.92 0 0,0,0 0 0,0,0 0 0 0 0 7.2235253535702 0 0 11.0934805105209 0 0 0 cat,chimp,cow,dog,guinea_pig,horse,human,macaque,marmoset,mouse,orangutan,panda,pig,rabbit,rat, antisense antisense A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0.007146, 0 0 0 0 ENSG00000234730.1 ENST00000428205.1 chr21:22939084-22987758 2 607 48065 intergenic -3.46 0 0,1,0 0 0,0,0 0 4.50983043794861 0 0 9.11203578487465 0 0 9.77413918651826 0 0 0 chimp,human,macaque,marmoset,orangutan, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0.0037255, 0 0 0 0 ENSG00000237527.1 ENST00000416182.1 chr21:23027359-23058649 5 475 30807 intergenic 3.07 0 0,0,0 0 0,0,0 0 5.45119615671763 0 10.9515789473684 4.51549972408868 0 14.3368421052632 4.75758756126854 0 0 0 cat,chimp,dog,guinea_pig,horse,human,macaque,marmoset,orangutan,pig, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0.0041885,NHEK@0,NHLF@0,SKNSHRA@0.029237, 0 0 0 0 ENSG00000238265.1 ENST00000419069.1 chr21:23095613-23109639 3 609 13413 intergenic 5.35 1 0,0,0 0 0,0,0 0 6.54447178110788 0 0 6.03809736822486 0 0 7.33512264221278 0 0 0 NA lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000233997.1 ENST00000425979.1 chr21:23119293-23169735 4 478 49958 intergenic 0.05 1 0,0,0 0 0,0,0 0 4.82070939589255 0 0 7.97043516553905 0 0 9.00646543096201 0 0 0 chimp,elephant,human,macaque,marmoset,orangutan, lincRNA lincRNA A549@0.010234,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0.0050955,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0.058343, 0 0 0 0 ENSG00000233997.1 ENST00000430060.1 chr21:23119305-23169735 5 755 49667 intergenic 0.05 1 0,0,0 0 0,0,0 0 4.84895403386554 0 0 8.01713411319387 0 0 9.05923450178187 0 0 0 chimp,human,macaque,marmoset,orangutan, lincRNA lincRNA A549@0.010234,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0.0050955,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0.058343, 0 0 0 0 ENSG00000227075.1 ENST00000452500.1 chr21:23305635-23348000 3 527 41834 intergenic -3.33 0 0,0,0 0 0,0,0 1.88235294117647 3.79643352297175 35.445 1.21062618595825 8.59633312616532 32.198 12.842504743833 11.514796576947 37.924 0 0 chimp,guinea_pig,human,macaque,marmoset,orangutan, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0.010103,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000233215.1 ENST00000416327.1 chr21:23381263-23390475 3 792 8416 intergenic -5.69 0 0,0,1 0 0,0,0 0 0 0 0 0 5.497 0 0 9.984 0 0 chimp,human,orangutan, lincRNA lincRNA A549@0.01188,AG04450@0,BJ@0,GM12878@0.0095355,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0.198929,MCF7@0.0086475,NHEK@0,NHLF@0,SKNSHRA@0.0311025, 0 0 0 0 ENSG00000233215.1 ENST00000420255.1 chr21:23381477-23470778 6 891 88400 intergenic 4.75 1 0,0,0 0 0,0,0 0 1.78308823529412 0 0 3.89290723981901 0 0 5.01054298642534 0 0 0 chimp,horse,human,macaque,marmoset,orangutan, lincRNA lincRNA A549@0.01188,AG04450@0,BJ@0,GM12878@0.0095355,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0.198929,MCF7@0.0086475,NHEK@0,NHLF@0,SKNSHRA@0.0311025, 0 0 0 0 ENSG00000233215.1 ENST00000419467.1 chr21:23413493-23426688 3 462 12729 intergenic -2.12 0 0,0,0 0 0,0,0 0 2.36318642469951 0 0 9.51410165763218 0 0 9.68599261528792 0 0 0 chimp,human,macaque,marmoset,orangutan, lincRNA lincRNA A549@0.01188,AG04450@0,BJ@0,GM12878@0.0095355,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0.198929,MCF7@0.0086475,NHEK@0,NHLF@0,SKNSHRA@0.0311025, 0 0 0 0 ENSG00000184856.5 ENST00000419431.1 chr21:23470936-23488847 6 720 17181 intergenic 0.82 0 0,0,1 0 0,0,0 0 4.48681683254758 0 0 5.21320062860136 0 0 8.11506897153833 0 0 0 chimp,human,macaque,orangutan, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0.00383, 0 0 0 0 ENSG00000226043.1 ENST00000444130.1 chr21:23582258-23793139 3 432 210445 intergenic -9.06 0 0,1,0 1 0,0,0 0 2.67041269690418 0 0 4.45539689705149 0 0 5.3379837962413 0 0 0 chimp,human,macaque,marmoset,orangutan, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0.012209,H1HESC@0,HELAS3@0.0383825,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@3.16174,MCF7@0,NHEK@0.0555817,NHLF@0,SKNSHRA@0, 1 96 0 0 ENSG00000234034.1 ENST00000441759.1 chr21:23872924-23892377 3 974 18475 intergenic 1.91 0 0,0,0 0 0,0,0 0.30082135523614 1.12600811907984 0 4.43121149897331 5.00335588633288 0 5.11498973305955 5.1838700947226 0 0 0 chimp,human,macaque,marmoset,orangutan,rabbit, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0.00261333,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000230972.1 ENST00000421604.1 chr21:24437813-24503528 5 757 64950 intergenic -5.55 0 0,0,0 0 0,0,0 17.6803170409511 2.53926096997691 0 5.35006605019815 2.93745958429561 0 5.62747688243065 28.7251578137029 0 0 0 chimp,human,macaque,marmoset,orangutan, processed_transcript processed_transcript A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000228592.1 ENST00000262354.4 chr21:24733426-24757182 5 1720 22028 intergenic 2.14 1 0,0,0 0 0,0,0 22.6523255813953 2.09733067005629 0 45.7308139534884 0.356273833303069 0 62.668023255814 3.07681133103323 0 0 0 chimp,cow,horse,human,macaque,marmoset,orangutan, lincRNA processed_transcript A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@3.2672,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0.002819,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000227716.1 ENST00000433101.1 chr21:24849960-24863043 2 859 12222 intergenic -2.78 0 0,0,1 0 0,0,0 0 4.82490590738013 0 0 2.15717558501064 0 0 2.24954999181803 0 0 0 chimp,human,macaque,marmoset,orangutan, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000231986.1 ENST00000441465.1 chr21:25261114-25262857 3 677 1062 intergenic 1.70 0 0,0,1 0 0,0,0 0 0 0 0 0 0 21.9217134416544 2.0593220338983 0 0 0 cat,chimp,human,macaque,marmoset,orangutan, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0.0144475,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000235564.1 ENST00000447405.1 chr21:25333220-25339588 2 776 5590 intergenic 0.47 0 0,0,0 0 0,0,0 0 0 0 0 0.939713774597495 0 0 2.37155635062612 0 0 0 elephant,horse,human,marmoset,orangutan, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0.0116855, 0 0 0 0 ENSG00000226996.1 ENST00000415269.1 chr21:25415572-25415941 2 215 152 intergenic -7.57 0 0,0,0 0 0,0,0 0 0 0 0 0 0 0 0 0 0 0 cat,chimp,dog,horse,human,macaque,marmoset,orangutan, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000226996.1 ENST00000434859.1 chr21:25415572-25422601 2 845 6182 intergenic 3.45 1 0,0,0 0 0,0,0 0 0 0 0 0.305726302167583 0 0 1.53202846975089 0 0 0 chimp,human,macaque,marmoset,orangutan, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000224018.1 ENST00000448063.1 chr21:25527484-25560655 3 690 32477 intergenic -1.12 0 0,1,1 0 0,0,0 0 0 0 0 1.8790220771623 0 0 2.10662930689411 0 0 0 chimp,horse,human,macaque,orangutan, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000224832.1 ENST00000416218.1 chr21:25676863-25693690 4 2003 14818 intergenic 2.76 1 0,1,0 0 0,0,0 0 1.74382507760831 0 0 0.462680523687407 0 0 0.683088136050749 0 0 0 guinea_pig,human,macaque,marmoset,orangutan,rabbit, lincRNA lincRNA A549@0,AG04450@0.002347,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000237484.3 ENST00000453784.1 chr21:25801054-25862621 6 2903 58654 intergenic 2.54 0 0,1,1 0 0,0,0 0 1.14014389470454 0 0 0.879070481126607 0 0 1.33058273945511 0 0 0 chimp,dog,horse,human,macaque,marmoset,orangutan,pig, lincRNA processed_transcript A549@0.004394,AG04450@0.0065275,BJ@0,GM12878@0.209564,H1HESC@0,HELAS3@0.233245,HEPG2@0.045636,HMEC@0,HSMM@0.0205425,HUVEC@0.0009195,K562@0.0153315,MCF7@0.000945,NHEK@0,NHLF@0.003337,SKNSHRA@0.0010445, 0 0 0 0 ENSG00000237484.3 ENST00000535533.1 chr21:25801054-25862621 5 2899 58660 intergenic 2.54 0 0,1,1 0 0,0,0 0 1.1400272758268 0 0 0.878980565973406 0 0 1.33044664166383 0 0 0 chimp,dog,horse,human,macaque,marmoset,orangutan,pig, lincRNA processed_transcript A549@0.004394,AG04450@0.0065275,BJ@0,GM12878@0.209564,H1HESC@0,HELAS3@0.233245,HEPG2@0.045636,HMEC@0,HSMM@0.0205425,HUVEC@0.0009195,K562@0.0153315,MCF7@0.000945,NHEK@0,NHLF@0.003337,SKNSHRA@0.0010445, 0 0 0 0 ENSG00000237484.3 ENST00000423581.1 chr21:25801072-25813638 3 491 12071 intergenic 1.33 0 0,1,0 0 0,0,0 0 3.35266340816834 0 0 2.42457128655455 0 0 3.83423080109353 0 0 0 chimp,dog,human,orangutan, lincRNA processed_transcript A549@0.004394,AG04450@0.0065275,BJ@0,GM12878@0.209564,H1HESC@0,HELAS3@0.233245,HEPG2@0.045636,HMEC@0,HSMM@0.0205425,HUVEC@0.0009195,K562@0.0153315,MCF7@0.000945,NHEK@0,NHLF@0.003337,SKNSHRA@0.0010445, 0 0 0 0 ENSG00000237484.3 ENST00000415182.1 chr21:25801095-25920256 3 2173 116984 intergenic 5.23 1 0,1,1 0 0,0,0 0 2.58104527114819 0 2.66728025770824 2.47583430212679 0 3.39806718821905 2.74585413389865 0 0 0 cat,chimp,dog,elephant,horse,human,macaque,marmoset,orangutan,panda, lincRNA processed_transcript A549@0.004394,AG04450@0.0065275,BJ@0,GM12878@0.209564,H1HESC@0,HELAS3@0.233245,HEPG2@0.045636,HMEC@0,HSMM@0.0205425,HUVEC@0.0009195,K562@0.0153315,MCF7@0.000945,NHEK@0,NHLF@0.003337,SKNSHRA@0.0010445, 0 0 0 0 ENSG00000226983.2 ENST00000441009.1 chr21:26212864-26430059 4 2715 214474 intergenic -1.77 0 0,1,0 0 0,0,0 0 2.15372026446096 0 0 2.41441386834768 0 1.03867403314917 3.33435754450423 0 0 0 chimp,cow,dog,guinea_pig,horse,human,macaque,marmoset,orangutan,pig,rabbit, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0.0007835,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0.000989, 0 0 0 0 ENSG00000227090.1 ENST00000446404.1 chr21:26258990-26275070 2 538 15540 intergenic 5.42 0 0,0,1 0 0,0,0 0 0 0 0 1.61763191763192 0 0 1.81138996138996 0 0 0 cat,chimp,dog,elephant,guinea_pig,horse,human,macaque,marmoset,orangutan,panda,pig, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0.164329,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000230379.1 ENST00000454182.1 chr21:26310745-26316294 2 250 5297 intergenic -4.27 1 0,0,1 0 0,0,0 0 0 0 0 0.305833490655088 0 0 3.47007740230319 0 0 0 chimp,human,macaque,marmoset,orangutan, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0.100609,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000230379.1 ENST00000441666.1 chr21:26310745-26324471 2 439 13285 intergenic -4.27 1 0,1,1 0 0,0,0 0 0 0 0 0.121942039894618 0 0 1.38359051561912 2.916 0 0 cat,chimp,cow,dog,elephant,guinea_pig,horse,human,macaque,marmoset,orangutan,panda,pig,rabbit, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0.100609,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000230379.1 ENST00000444178.1 chr21:26310745-26365129 2 307 54075 intergenic -3.89 1 0,0,1 0 0,0,0 0 2.63336107258437 0 0 2.62631530282016 0 0 5.04647249190939 0 0 0 chimp,horse,human,macaque,marmoset,orangutan, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0.100609,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000244278.1 ENST00000424017.1 chr21:26427848-26442219 4 475 13890 intergenic 5.69 1 0,0,0 0 0,0,0 27.5936842105263 0.513318934485241 81.328 0 0.172066234701224 30.198 0 0.646148308135349 32.449 0 0 chimp,horse,human,marmoset,orangutan,rabbit, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000232512.1 ENST00000453802.1 chr21:26467335-26475983 3 574 8070 intergenic -1.43 1 0,0,0 0 0,0,0 0 5.47930607187113 0 0 8.95402726146221 0 0 13.1063197026022 0 0 0 chimp,human,macaque,orangutan, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0.003939, 0 0 0 0 ENSG00000232512.1 ENST00000418942.1 chr21:26467355-26475983 3 681 7943 intergenic -4.45 1 0,0,0 0 0,0,0 0 5.56691426413194 0 0 9.09719249653783 0 0 13.315875613748 0 0 0 chimp,human,macaque,marmoset,orangutan, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0.003939, 0 0 0 0 ENSG00000223870.1 ENST00000426609.1 chr21:26499782-26507561 4 287 7486 intergenic -5.10 0 0,0,0 0 0,0,0 0 13.4344109003473 0 0 29.7582153352925 2.04 0 33.203980764093 2.12 0 0 chimp,human,macaque,marmoset,orangutan,panda, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0.0155935, 0 0 0 0 ENSG00000222042.1 ENST00000409758.1 chr21:26541745-26706139 4 759 163629 intergenic -1.00 1 0,1,1 0 0,1,0 0 8.99682207921579 0 0 9.98828447280127 0 0 11.0673902547837 0 0 0 chimp,horse,human,macaque,marmoset,orangutan, lincRNA lincRNA A549@0,AG04450@0.111768,BJ@0.006343,GM12878@1.62189,H1HESC@0.0952295,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0.005975,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0.043303,SKNSHRA@0.288114, 0 0 0 0 ENSG00000185433.4 ENST00000332587.4 chr21:26758133-26804013 5 1471 44401 intergenic 3.04 1 0,0,1 0 0,0,0 0 3.43591360554942 0 6.8830727396329 6.27584964302606 5.957 9.12916383412644 9.5633206459314 9.768 0 0 chimp,cow,dog,elephant,guinea_pig,horse,human,macaque,marmoset,mouse,orangutan,pig, lincRNA non_coding A549@0,AG04450@0,BJ@0,GM12878@19.702,H1HESC@0.001793,HELAS3@0.0016935,HEPG2@0.0073725,HMEC@0,HSMM@0.001491,HUVEC@0,K562@0,MCF7@0,NHEK@0.00417867,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000185433.4 ENST00000441013.1 chr21:26758133-26804013 4 1376 44498 intergenic 3.61 1 0,0,1 0 0,0,0 0 3.428423749382 0 7.35828488372093 6.26216908625107 5.957 9.7594476744186 9.54247381904805 9.768 0 0 chimp,cow,dog,elephant,guinea_pig,horse,human,macaque,marmoset,mouse,orangutan,rabbit,rat, lincRNA non_coding A549@0,AG04450@0,BJ@0,GM12878@19.702,H1HESC@0.001793,HELAS3@0.0016935,HEPG2@0.0073725,HMEC@0,HSMM@0.001491,HUVEC@0,K562@0,MCF7@0,NHEK@0.00417867,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000185433.4 ENST00000440205.1 chr21:26768506-26797021 3 737 27774 intergenic 0.10 0 0,1,0 0 0,0,0 29.8941655359566 1.35724058471952 0 11.8792401628223 5.95150140419097 9.579 16.6526458616011 10.0047526463599 11.154 0 0 chimp,dog,elephant,horse,human,macaque,marmoset, lincRNA non_coding A549@0,AG04450@0,BJ@0,GM12878@19.702,H1HESC@0.001793,HELAS3@0.0016935,HEPG2@0.0073725,HMEC@0,HSMM@0.001491,HUVEC@0,K562@0,MCF7@0,NHEK@0.00417867,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000185433.4 ENST00000439840.1 chr21:26768799-26802321 4 627 32889 intergenic 0.72 0 0,0,0 0 0,0,0 0 1.71823406002007 0 5.59808612440191 7.52856578187236 0 5.88835725677831 11.6739335340083 0 0 0 cat,chimp,cow,dog,horse,human,macaque,marmoset,orangutan, lincRNA non_coding A549@0,AG04450@0,BJ@0,GM12878@19.702,H1HESC@0.001793,HELAS3@0.0016935,HEPG2@0.0073725,HMEC@0,HSMM@0.001491,HUVEC@0,K562@0,MCF7@0,NHEK@0.00417867,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000243740.1 ENST00000465390.1 chr21:26825507-26839042 4 513 13016 intergenic -1.16 0 0,1,1 0 0,0,0 0 15.435848186847 0 0 13.0474800245851 0 0 14.2093577135833 0 0 0 chimp,human,macaque,marmoset,orangutan, lincRNA lincRNA A549@0,AG04450@0.0078265,BJ@0,GM12878@0.854975,H1HESC@0,HELAS3@0.005673,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0.0056355,MCF7@0,NHEK@0.00320433,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000243740.1 ENST00000467945.1 chr21:26825507-26839042 4 477 13052 intergenic -2.00 0 0,1,1 0 0,0,0 0 15.3932730615998 0 0 13.0114924915722 0 0 14.1701654918786 0 0 0 chimp,human,macaque,orangutan, lincRNA lincRNA A549@0,AG04450@0.0078265,BJ@0,GM12878@0.854975,H1HESC@0,HELAS3@0.005673,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0.0056355,MCF7@0,NHEK@0.00320433,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000243740.1 ENST00000468736.1 chr21:26825507-26839042 4 462 13067 intergenic -2.00 0 0,1,1 0 0,0,0 0 15.3756026631974 0 0 12.9965562103008 0 0 14.1538991352261 0 0 0 chimp,human,macaque,marmoset,orangutan,rat, lincRNA lincRNA A549@0,AG04450@0.0078265,BJ@0,GM12878@0.854975,H1HESC@0,HELAS3@0.005673,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0.0056355,MCF7@0,NHEK@0.00320433,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000243740.1 ENST00000489205.1 chr21:26825507-26839042 4 408 13121 intergenic -2.00 0 0,1,1 0 0,0,0 0 15.3123237558113 0 0 12.9430683636918 0 0 14.0956481975459 0 0 0 chimp,dog,horse,human,macaque,orangutan,panda, lincRNA lincRNA A549@0,AG04450@0.0078265,BJ@0,GM12878@0.854975,H1HESC@0,HELAS3@0.005673,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0.0056355,MCF7@0,NHEK@0.00320433,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000229962.1 ENST00000419694.1 chr21:26887785-26890650 2 1044 1819 intergenic 8.28 1 0,0,0 0 0,0,0 0 0 0 0 7.96151731720726 0 0 16.8609125893348 0 0 0 chimp,horse,human,macaque,orangutan, lincRNA lincRNA A549@0.0178055,AG04450@0.013074,BJ@0,GM12878@0.068944,H1HESC@0.034276,HELAS3@0.190378,HEPG2@0.027868,HMEC@0.007829,HSMM@0.0041465,HUVEC@0,K562@0.0199815,MCF7@0.011794,NHEK@0.096528,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000246147.1 ENST00000501838.1 chr21:26931716-26936957 2 2421 2818 intergenic -5.80 0 0,1,0 0 0,0,0 2.90788930194135 46.986515259049 0 5.42833539859562 41.3999290276792 0 5.60718711276332 41.4229950319375 0 0 0 chimp,human,orangutan,pig, lincRNA lincRNA A549@0.086839,AG04450@0.0670995,BJ@0.037905,GM12878@0.834283,H1HESC@0.055383,HELAS3@0.024663,HEPG2@0.0518305,HMEC@0.00676,HSMM@0.06892,HUVEC@0.0621915,K562@0.249607,MCF7@0.04869,NHEK@0.0392883,NHLF@0.0144235,SKNSHRA@0.140844, 0 0 0 0 ENSG00000234883.1 ENST00000456917.1 chr21:26934221-26947480 4 1596 11657 intergenic 4.84 1 1,1,1 1 0,0,0 112.469298245614 28.789911641074 14.88 97.8859649122807 22.5107660633096 25.127 87.8189223057644 19.348631723428 29.182 0 0 cat,chimp,cow,dog,elephant,horse,human,macaque,marmoset,mouse,orangutan,panda,pig,rabbit, lincRNA non_coding A549@0,AG04450@1.74606,BJ@0.127248,GM12878@161.629,H1HESC@0.0360945,HELAS3@0.0069425,HEPG2@0.001705,HMEC@0.020473,HSMM@0.098077,HUVEC@0.526795,K562@0.003407,MCF7@0,NHEK@0.0720673,NHLF@0.548779,SKNSHRA@0.001418, 0 0 0 0 ENSG00000233783.1 ENST00000456904.1 chr21:27306612-27307584 2 428 542 intronic -0.14 0 0,0,0 0 0,0,0 24.5700934579439 0 59.986 35.1635514018692 0 70.673 36.1542056074766 0 85.935 0 0 cat,chimp,dog,elephant,guinea_pig,horse,human,macaque,marmoset,orangutan,panda,pig,rabbit, antisense antisense A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000224541.1 ENST00000455275.1 chr21:27530409-27548142 2 390 17341 intronic -3.74 0 0,0,1 0 0,0,0 0 13.1973357937835 10.277 0 24.9633239144225 10.989 0 23.7549737616054 11.503 0 0 cat,chimp,cow,dog,elephant,guinea_pig,horse,human,macaque,marmoset,orangutan,panda,pig,rabbit, antisense antisense A549@0.028185,AG04450@0.006008,BJ@0.0061735,GM12878@0.0239185,H1HESC@0.0409085,HELAS3@0.0234525,HEPG2@0,HMEC@0,HSMM@0.0116305,HUVEC@0,K562@0,MCF7@0.015619,NHEK@0.0168397,NHLF@0.0099,SKNSHRA@0.030275, 0 0 0 0 ENSG00000229025.1 ENST00000435878.1 chr21:27722099-27722953 2 514 338 intergenic -2.30 1 0,0,0 0 0,0,0 0 0 0 26.6634241245136 43.4082840236686 0 27.7198443579767 45.1508875739645 0 0 0 chimp,human,macaque,marmoset,orangutan, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000232692.1 ENST00000429340.1 chr21:27750871-27843421 6 775 91765 intronic 0.08 0 0,0,0 0 0,0,0 0 5.60612433934507 0 0 9.14683158066801 0 0 10.7407508309268 0 0 0 chimp,cow,horse,human,macaque,marmoset,orangutan, antisense antisense A549@0.0322995,AG04450@0.105156,BJ@0.170843,GM12878@0.347403,H1HESC@0.043491,HELAS3@0.0108405,HEPG2@0,HMEC@0.165247,HSMM@0.0789845,HUVEC@0.011452,K562@0,MCF7@0.010263,NHEK@0.356461,NHLF@0.0069195,SKNSHRA@0.033599, 0 0 0 0 ENSG00000232692.1 ENST00000452460.1 chr21:27760045-27790406 4 640 29715 intergenic 6.60 0 0,0,1 0 0,0,0 0 9.88086824835941 0 4.446875 15.502439845196 0 4.54375 17.5172471815581 0 0 0 cat,chimp,cow,dog,elephant,guinea_pig,horse,human,macaque,marmoset,orangutan,panda,pig, antisense antisense A549@0.0322995,AG04450@0.105156,BJ@0.170843,GM12878@0.347403,H1HESC@0.043491,HELAS3@0.0108405,HEPG2@0,HMEC@0.165247,HSMM@0.0789845,HUVEC@0.011452,K562@0,MCF7@0.010263,NHEK@0.356461,NHLF@0.0069195,SKNSHRA@0.033599, 0 0 0 0 ENSG00000232692.1 ENST00000421771.1 chr21:27762455-27844017 2 1076 80484 intronic 2.17 1 1,1,1 0 0,0,0 20.7797397769517 5.43429750012425 29.682 4.96282527881041 9.03377068734159 58.181 21.6533457249071 10.4350554147408 71.947 0 0 chimp,cow,dog,elephant,guinea_pig,human,macaque,orangutan,panda,pig,rabbit,rat, antisense antisense A549@0.0322995,AG04450@0.105156,BJ@0.170843,GM12878@0.347403,H1HESC@0.043491,HELAS3@0.0108405,HEPG2@0,HMEC@0.165247,HSMM@0.0789845,HUVEC@0.011452,K562@0,MCF7@0.010263,NHEK@0.356461,NHLF@0.0069195,SKNSHRA@0.033599, 0 0 0 0 ENSG00000197934.4 ENST00000414486.1 chr21:27765954-27890912 4 418 124534 intronic 0.54 1 0,0,0 0 0,0,0 61.1674641148325 6.43979154287183 5.202 45.6459330143541 9.26933206995681 4.637 49.6961722488038 10.8075465334768 18.472 0 0 cat,chimp,cow,dog,elephant,horse,human,macaque,marmoset,mouse,orangutan,panda,rabbit, antisense antisense A549@0.0022865,AG04450@0.026503,BJ@0.019133,GM12878@0.030965,H1HESC@0,HELAS3@0,HEPG2@0.0007995,HMEC@0.037796,HSMM@0.020156,HUVEC@0.002682,K562@0,MCF7@0,NHEK@0.028449,NHLF@0.0029155,SKNSHRA@0.000815, 0 0 0 0 ENSG00000197934.4 ENST00000357401.3 chr21:27778262-27941571 4 3408 159895 intronic 0.39 0 0,1,0 0 0,0,0 13.8262910798122 7.40725476093687 0 14.4028755868545 9.45432940367116 2.53 15.3019366197183 11.0906907658151 4.403 0 0 chimp,cow,dog,elephant,guinea_pig,horse,human,macaque,marmoset,orangutan,panda, antisense antisense A549@0.0022865,AG04450@0.026503,BJ@0.019133,GM12878@0.030965,H1HESC@0,HELAS3@0,HEPG2@0.0007995,HMEC@0.037796,HSMM@0.020156,HUVEC@0.002682,K562@0,MCF7@0,NHEK@0.028449,NHLF@0.0029155,SKNSHRA@0.000815, 0 0 0 0 ENSG00000232692.1 ENST00000444306.1 chr21:27788828-27843517 2 599 54088 intronic 0.08 0 0,0,0 0 0,0,0 0 3.3300547256323 0 0 6.1854200562047 1.984 7.12353923205342 7.42281097470789 2.072 0 0 chimp,cow,dog,elephant,human,macaque,marmoset,orangutan,panda,pig, antisense antisense A549@0.0322995,AG04450@0.105156,BJ@0.170843,GM12878@0.347403,H1HESC@0.043491,HELAS3@0.0108405,HEPG2@0,HMEC@0.165247,HSMM@0.0789845,HUVEC@0.011452,K562@0,MCF7@0.010263,NHEK@0.356461,NHLF@0.0069195,SKNSHRA@0.033599, 0 0 0 0 ENSG00000223563.1 ENST00000426771.1 chr21:28261695-28312061 3 358 50004 intronic 6.49 0 0,1,0 0 0,0,0 67.4497206703911 30.3576313894888 141.648 12.3854748603352 29.0734141268698 98.26 8.8659217877095 30.1667066634669 101.384 0 0 cat,chimp,cow,dog,elephant,horse,human,macaque,marmoset,orangutan,panda,pig,rabbit, antisense antisense A549@0,AG04450@0,BJ@0,GM12878@0.008101,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000231236.2 ENST00000420186.2 chr21:28731204-28820898 4 2599 87089 intergenic 0.47 1 0,0,0 0 0,0,0 0 6.89115732182021 129.43 15.1069642170065 6.87059215285513 102.242 16.241631396691 19.5260021357462 107.549 0 0 cat,chimp,cow,horse,human,macaque,marmoset,orangutan,panda,rabbit, processed_transcript processed_transcript A549@0,AG04450@0.0055505,BJ@0.0065765,GM12878@0.001135,H1HESC@0,HELAS3@0,HEPG2@0.0009115,HMEC@0,HSMM@0.0053745,HUVEC@0,K562@0,MCF7@0,NHEK@0.000490333,NHLF@0.0032625,SKNSHRA@0.0726865, 0 0 0 0 ENSG00000236332.1 ENST00000447384.1 chr21:28733483-28768106 5 949 33666 intergenic 2.60 1 0,0,1 0 0,0,0 0 9.4062852729757 0 0 6.8546604883265 0 0 25.2624903463435 0 0 0 chimp,human,macaque,marmoset,orangutan, lincRNA lincRNA A549@0.0057905,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0.0023895,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000234052.1 ENST00000426418.1 chr21:29011012-29025810 3 465 14329 intergenic -2.82 0 0,0,0 0 0,0,0 61.7204301075269 2.12896922325354 0 49.094623655914 6.87333379859027 0 49.0645161290323 8.03880242864122 0 0 0 chimp,cow,dog,elephant,guinea_pig,horse,human,macaque,marmoset,orangutan,panda,rabbit, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0.008463,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000225298.1 ENST00000411460.1 chr21:29094698-29123552 4 520 28328 intergenic 0.42 1 1,1,1 0 0,0,0 0 2.85819683705168 0 0 6.4050409488845 0 0 7.28424173962158 0 0 0 cat,chimp,dog,horse,human,macaque,marmoset,orangutan,panda, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0.087784,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0.0941767,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000225298.1 ENST00000425376.1 chr21:29094717-29123552 4 505 28324 intergenic 0.42 1 1,1,1 0 0,0,0 0 2.85860048015817 0 0 6.40594548792543 0 0 7.28527044202796 0 0 0 chimp,dog,horse,human,macaque,marmoset,orangutan, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0.087784,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0.0941767,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000225298.1 ENST00000442550.1 chr21:29097118-29123552 4 568 25860 intergenic 0.42 1 0,0,1 0 0,0,0 0 3.13097447795824 0 0 7.01631863882444 0 0 7.97942768754834 0 0 0 chimp,dog,horse,human,marmoset,orangutan, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0.087784,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0.0941767,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000234083.1 ENST00000433344.1 chr21:29327240-29357614 3 569 29801 intergenic -8.08 0 0,0,0 0 0,0,0 6.95957820738137 1.68376900104023 0 67.5571177504394 9.84111271433845 19.46 72.664323374341 10.5462232810979 24.011 0 0 chimp,human,macaque,marmoset,orangutan, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0.0102255,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0.0118995, 0 0 0 0 ENSG00000178457.3 ENST00000324988.3 chr21:29385682-29395552 2 605 9263 intergenic -0.07 0 0,0,1 0 0,0,0 53.8314049586777 2.54777070063694 173.696 43.6578512396694 3.04490985641801 141.052 43.5570247933884 3.13526935118212 140.648 0 0 chimp,cow,horse,human,macaque,marmoset,orangutan, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0.0098055,K562@0,MCF7@0,NHEK@0,NHLF@0.0063575,SKNSHRA@0.681501, 0 0 0 0 ENSG00000232079.1 ENST00000426534.1 chr21:29420733-29509930 5 1749 87440 intergenic 6.87 0 0,0,0 0 0,0,0 0 9.84823879231473 0 0 12.918401189387 0 0 14.161505032022 0 0 0 cat,chimp,cow,human,macaque,marmoset,orangutan, lincRNA lincRNA A549@0.0352155,AG04450@0,BJ@0,GM12878@0.0665525,H1HESC@0,HELAS3@0.0140275,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0.0025015,NHEK@0,NHLF@0,SKNSHRA@0.001296, 0 0 0 0 ENSG00000232079.1 ENST00000458316.1 chr21:29420766-29475899 2 1120 54011 intergenic -8.46 0 0,0,1 0 0,0,0 0 10.2093832737776 0 0 14.7634741071263 0 0 16.1128658976875 0 0 0 chimp,guinea_pig,human,macaque,marmoset,orangutan,pig,rat, lincRNA lincRNA A549@0.0352155,AG04450@0,BJ@0,GM12878@0.0665525,H1HESC@0,HELAS3@0.0140275,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0.0025015,NHEK@0,NHLF@0,SKNSHRA@0.001296, 0 0 0 0 ENSG00000232079.1 ENST00000423808.1 chr21:29462633-29475109 2 447 12027 intergenic -2.19 0 0,0,0 0 0,0,0 0 0 0 0 5.62168454311133 0 0 6.18799368088468 0 0 0 NA lincRNA lincRNA A549@0.0352155,AG04450@0,BJ@0,GM12878@0.0665525,H1HESC@0,HELAS3@0.0140275,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0.0025015,NHEK@0,NHLF@0,SKNSHRA@0.001296, 0 0 0 0 ENSG00000232079.1 ENST00000436878.1 chr21:29462764-29475559 3 819 11972 intergenic -10.59 0 0,0,0 0 0,0,0 0 0 0 0 5.64751085867023 0 0 6.21642165051788 0 0 0 chimp,cow,dog,elephant,guinea_pig,horse,human,macaque,marmoset,orangutan,panda,pig,rat, lincRNA lincRNA A549@0.0352155,AG04450@0,BJ@0,GM12878@0.0665525,H1HESC@0,HELAS3@0.0140275,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0.0025015,NHEK@0,NHLF@0,SKNSHRA@0.001296, 0 0 0 0 ENSG00000236532.1 ENST00000453420.1 chr21:29488413-29600986 6 4480 108083 intergenic 0.89 1 0,0,0 0 0,0,0 0 2.2198310557627 0 0.3875 4.81065477457139 0 0.4140625 5.59988157249521 0 0 0 chimp,human,macaque,marmoset,orangutan, lincRNA lincRNA A549@0,AG04450@0.200363,BJ@0.157126,GM12878@0.029333,H1HESC@0.001125,HELAS3@0.0573465,HEPG2@0.0538425,HMEC@0,HSMM@0.0046445,HUVEC@0.009891,K562@0,MCF7@0,NHEK@0.00525,NHLF@0.030587,SKNSHRA@1.43041, 0 0 0 0 ENSG00000236532.1 ENST00000433303.1 chr21:29535921-29542462 3 273 6264 intergenic 0 0 0,1,0 0 0,0,0 0 0 0 0 0 0 0 0 1.701 0 0 human, lincRNA lincRNA A549@0,AG04450@0.200363,BJ@0.157126,GM12878@0.029333,H1HESC@0.001125,HELAS3@0.0573465,HEPG2@0.0538425,HMEC@0,HSMM@0.0046445,HUVEC@0.009891,K562@0,MCF7@0,NHEK@0.00525,NHLF@0.030587,SKNSHRA@1.43041, 0 0 0 0 ENSG00000236532.1 ENST00000437194.1 chr21:29584625-29600799 4 439 15729 intergenic 2.06 0 0,1,0 0 0,0,0 0 0 0 0 1.53944942462967 0 0 2.58230020980355 0 0 0 chimp,human,marmoset,orangutan, lincRNA lincRNA A549@0,AG04450@0.200363,BJ@0.157126,GM12878@0.029333,H1HESC@0.001125,HELAS3@0.0573465,HEPG2@0.0538425,HMEC@0,HSMM@0.0046445,HUVEC@0.009891,K562@0,MCF7@0,NHEK@0.00525,NHLF@0.030587,SKNSHRA@1.43041, 0 0 0 0 ENSG00000232855.1 ENST00000430247.1 chr21:29816870-29998926 5 678 181370 intergenic 1.05 0 0,0,1 0 0,0,0 0 8.74365109996141 0 0 9.91779787175387 0 0 11.0389755747919 0 0 0 cat,chimp,cow,dog,elephant,human,macaque,marmoset,orangutan,rabbit, lincRNA lincRNA A549@0,AG04450@0.134344,BJ@0.169333,GM12878@0.0088415,H1HESC@0.0065695,HELAS3@0.0411115,HEPG2@0.0450875,HMEC@0,HSMM@0.014457,HUVEC@0,K562@0.027878,MCF7@0,NHEK@0.196409,NHLF@0.0775835,SKNSHRA@0.043611, 0 0 0 0 ENSG00000232855.1 ENST00000433310.1 chr21:29816870-30047170 5 895 229397 intergenic 2.75 0 0,0,1 0 0,0,0 0 10.6036216689843 7.315 2.67039106145251 10.6969010056801 12.578 2.80446927374302 11.8976970056278 13.048 0 0 chimp,elephant,guinea_pig,horse,human,macaque,marmoset,orangutan,rabbit, lincRNA lincRNA A549@0,AG04450@0.134344,BJ@0.169333,GM12878@0.0088415,H1HESC@0.0065695,HELAS3@0.0411115,HEPG2@0.0450875,HMEC@0,HSMM@0.014457,HUVEC@0,K562@0.027878,MCF7@0,NHEK@0.196409,NHLF@0.0775835,SKNSHRA@0.043611, 0 0 0 0 ENSG00000226935.2 ENST00000412526.1 chr21:29911640-29912677 2 868 167 intergenic 2.52 1 1,1,1 0 0,0,0 0 0 0 0 0 0 0 0 0 0 0 chimp,human,marmoset,orangutan, lincRNA non_coding A549@0,AG04450@0.029069,BJ@0.105022,GM12878@0,H1HESC@0,HELAS3@0.0026865,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0.055294,K562@0,MCF7@0.0023635,NHEK@0,NHLF@0.167641,SKNSHRA@0, 0 0 0 0 ENSG00000226935.2 ENST00000455939.1 chr21:29911640-29912677 2 512 523 intergenic 0.94 1 1,1,1 0 0,0,0 0 0 0 0 0 0 0 0 0 0 0 chimp,guinea_pig,human,orangutan, lincRNA non_coding A549@0,AG04450@0.029069,BJ@0.105022,GM12878@0,H1HESC@0,HELAS3@0.0026865,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0.055294,K562@0,MCF7@0.0023635,NHEK@0,NHLF@0.167641,SKNSHRA@0, 0 0 0 0 ENSG00000232855.1 ENST00000452028.1 chr21:30043303-30047095 2 441 3349 intergenic -4.40 0 0,0,0 0 0,0,0 0 9.61481039116154 7.315 5.41950113378685 15.0606151089878 5.796 5.69160997732426 16.0355329949239 6.069 0 0 cat,chimp,cow,elephant,human,macaque,marmoset,orangutan,panda,pig,rat, lincRNA lincRNA A549@0,AG04450@0.134344,BJ@0.169333,GM12878@0.0088415,H1HESC@0.0065695,HELAS3@0.0411115,HEPG2@0.0450875,HMEC@0,HSMM@0.014457,HUVEC@0,K562@0.027878,MCF7@0,NHEK@0.196409,NHLF@0.0775835,SKNSHRA@0.043611, 0 0 0 0 ENSG00000231125.1 ENST00000457162.1 chr21:30430394-30431977 2 353 1228 intronic 0 0 0,0,0 0 0,0,0 0 0 58.208 0 0 59.46 0 0 62.533 0 0 chimp,elephant,human,macaque,marmoset,orangutan, antisense antisense A549@0.053754,AG04450@0.12182,BJ@0,GM12878@0.233837,H1HESC@0,HELAS3@0.154357,HEPG2@0.0125615,HMEC@0,HSMM@0,HUVEC@0,K562@0.587743,MCF7@0,NHEK@0.0934137,NHLF@0,SKNSHRA@0.0872755, 0 0 0 0 ENSG00000224649.1 ENST00000430001.1 chr21:30554348-30560116 2 325 5441 intergenic -2.96 1 0,0,0 0 0,0,0 0 8.26226796544753 0 33.8153846153846 10.2609814372358 0 35.8615384615385 12.4168351405992 3.765 0 0 chimp,dog,elephant,human,macaque,marmoset,orangutan,pig,rabbit, lincRNA lincRNA A549@0.0161305,AG04450@0.0378285,BJ@0,GM12878@0,H1HESC@0,HELAS3@0.076574,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0.118771,K562@0,MCF7@0,NHEK@0.0501117,NHLF@0.011934,SKNSHRA@0.013889, 0 0 0 0 ENSG00000215533.4 ENST00000447125.1 chr21:30565801-30660526 3 780 93941 intergenic 0.02 1 0,1,0 0 0,0,0 0 3.04585857080508 0 0 5.07044847297772 14.401 0 16.2417474798012 17.248 0 0 chimp,cow,dog,human,macaque,marmoset,orangutan, processed_transcript non_coding A549@0.013917,AG04450@0.010227,BJ@0.0628145,GM12878@0.045312,H1HESC@0,HELAS3@0.0722765,HEPG2@0.010519,HMEC@0.014939,HSMM@0.160033,HUVEC@0.009481,K562@0.002707,MCF7@0,NHEK@0.00800167,NHLF@0.034083,SKNSHRA@1.52731, 0 0 0 0 ENSG00000215533.4 ENST00000545936.1 chr21:30565801-30660526 4 660 94059 intergenic 0.02 1 0,1,0 0 0,0,0 0 3.04203744458266 0 0 5.06408743448261 14.401 0 16.2213716922357 17.248 0 0 cat,chimp,cow,dog,horse,human,macaque,marmoset,orangutan,pig,rabbit, processed_transcript non_coding A549@0.013917,AG04450@0.010227,BJ@0.0628145,GM12878@0.045312,H1HESC@0,HELAS3@0.0722765,HEPG2@0.010519,HMEC@0.014939,HSMM@0.160033,HUVEC@0.009481,K562@0.002707,MCF7@0,NHEK@0.00800167,NHLF@0.034083,SKNSHRA@1.52731, 0 0 0 0 ENSG00000215533.4 ENST00000420364.1 chr21:30565815-30660526 2 987 93722 intergenic 0.02 1 0,1,0 0 0,0,0 0 3.0529758221122 0 0 5.082296579245 14.401 0 16.2796995369284 17.248 0 0 chimp,human,macaque,marmoset,orangutan,pig, processed_transcript non_coding A549@0.013917,AG04450@0.010227,BJ@0.0628145,GM12878@0.045312,H1HESC@0,HELAS3@0.0722765,HEPG2@0.010519,HMEC@0.014939,HSMM@0.160033,HUVEC@0.009481,K562@0.002707,MCF7@0,NHEK@0.00800167,NHLF@0.034083,SKNSHRA@1.52731, 0 0 0 0 ENSG00000215533.4 ENST00000431661.1 chr21:30566358-30656528 3 305 89861 intergenic -1.18 0 0,0,0 0 0,0,0 0 3.18415107777568 0 0 5.22157554445199 0 0 16.8980647889518 0 0 0 cat,chimp,cow,dog,elephant,horse,human,macaque,orangutan,panda,pig,rabbit, processed_transcript non_coding A549@0.013917,AG04450@0.010227,BJ@0.0628145,GM12878@0.045312,H1HESC@0,HELAS3@0.0722765,HEPG2@0.010519,HMEC@0.014939,HSMM@0.160033,HUVEC@0.009481,K562@0.002707,MCF7@0,NHEK@0.00800167,NHLF@0.034083,SKNSHRA@1.52731, 0 0 0 0 ENSG00000248476.1 ENST00000504298.1 chr21:30723955-30734215 4 817 9437 intronic -3.70 0 0,0,1 0 0,1,0 31.9669522643819 0 0 52.3977968176255 1.43456606972555 0 60.422276621787 1.76528557804387 0 0 0 cat,chimp,dog,elephant,horse,human,marmoset,orangutan,pig, sense_intronic sense_intronic A549@0.130973,AG04450@0.744661,BJ@0.321792,GM12878@0.511898,H1HESC@0.239641,HELAS3@0.371072,HEPG2@0.127035,HMEC@0.065022,HSMM@0.115294,HUVEC@0.079608,K562@0.730496,MCF7@0.0443965,NHEK@0.174375,NHLF@0.082275,SKNSHRA@0.315947, 0 0 0 0 ENSG00000232118.1 ENST00000449923.1 chr21:30742340-30743547 2 239 966 intronic 0 0 0,0,0 0 0,0,0 0 0 0 14.9121338912134 6.28571428571429 35.152 15.1004184100418 6.7184265010352 36.578 0 0 chimp,cow,dog,horse,human,macaque,marmoset,orangutan,pig, antisense antisense A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0.0085315,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000228817.1 ENST00000436529.1 chr21:30744821-30745886 2 386 677 intronic -3.26 0 0,0,0 0 0,0,0 0 0 0 9.90155440414508 0 3.72 10.1036269430052 0 3.975 0 0 cat,chimp,dog,elephant,horse,human,macaque,marmoset,orangutan,panda,pig,rabbit, sense_intronic sense_intronic A549@0.154367,AG04450@0.390982,BJ@0.505222,GM12878@0.159233,H1HESC@0.20218,HELAS3@0.463685,HEPG2@0.357796,HMEC@0,HSMM@0.405113,HUVEC@0.345255,K562@0.198757,MCF7@0.0764665,NHEK@0.115945,NHLF@0,SKNSHRA@0.468229, 0 0 0 0 ENSG00000234293.1 ENST00000429843.1 chr21:30868367-30872706 2 404 3933 intronic -4.76 1 0,0,1 0 0,0,0 0 0 0 0 0 0 0 0 0 0 0 chimp,horse,human,macaque,marmoset,orangutan,panda, sense_intronic sense_intronic A549@0,AG04450@0.147604,BJ@0.172333,GM12878@0.013367,H1HESC@0,HELAS3@0.145807,HEPG2@0.302137,HMEC@0,HSMM@0,HUVEC@0.035542,K562@0.0220385,MCF7@0,NHEK@0.058597,NHLF@0,SKNSHRA@0.117979, 0 0 0 0 ENSG00000174680.5 ENST00000455392.2 chr21:31120494-31135999 5 762 14735 intronic -1.76 0 0,0,0 0 0,0,0 86.1942257217848 13.6777740074652 0 63.1312335958005 5.93953172718018 0 64.3346456692913 7.33091279267051 0 0 0 chimp,cow,elephant,guinea_pig,human,macaque,marmoset,orangutan,panda,rabbit, antisense antisense A549@0.00283,AG04450@0.021358,BJ@0.0140865,GM12878@0.023978,H1HESC@0.0038745,HELAS3@0.005892,HEPG2@0.0028365,HMEC@0,HSMM@0.01094,HUVEC@0,K562@0.0618915,MCF7@0,NHEK@0.00172133,NHLF@0.010749,SKNSHRA@0.0083515, 0 0 0 0 ENSG00000174680.5 ENST00000309331.4 chr21:31121257-31136321 3 810 14250 intronic -1.76 1 0,0,0 0 0,0,0 63.1111111111111 13.2211929824561 27.98 34.7185185185185 6.14168421052632 19.984 35.2481481481481 7.58042105263158 20.472 0 0 chimp,cow,dog,elephant,human,macaque,marmoset,mouse,orangutan,panda,rabbit, antisense antisense A549@0.00283,AG04450@0.021358,BJ@0.0140865,GM12878@0.023978,H1HESC@0.0038745,HELAS3@0.005892,HEPG2@0.0028365,HMEC@0,HSMM@0.01094,HUVEC@0,K562@0.0618915,MCF7@0,NHEK@0.00172133,NHLF@0.010749,SKNSHRA@0.0083515, 0 0 0 0 ENSG00000174680.5 ENST00000423221.1 chr21:31121266-31136321 2 622 14431 intronic 0 1 0,0,0 0 0,0,0 82.1864951768489 13.0553669184395 27.98 45.2122186495177 6.06465248423533 19.984 45.9019292604502 7.48534405100132 20.472 0 0 cat,chimp,cow,dog,human,macaque,marmoset,orangutan,pig,rabbit, antisense antisense A549@0.00283,AG04450@0.021358,BJ@0.0140865,GM12878@0.023978,H1HESC@0.0038745,HELAS3@0.005892,HEPG2@0.0028365,HMEC@0,HSMM@0.01094,HUVEC@0,K562@0.0618915,MCF7@0,NHEK@0.00172133,NHLF@0.010749,SKNSHRA@0.0083515, 0 0 0 0 ENSG00000174680.5 ENST00000412579.1 chr21:31131150-31136321 4 814 4351 intronic 0.23 1 0,0,0 0 0,0,0 0 30.9958630199954 0 0 15.3144104803493 0 0 19.8696851298552 0 0 0 chimp,dog,human,macaque,marmoset,orangutan,pig, antisense antisense A549@0.00283,AG04450@0.021358,BJ@0.0140865,GM12878@0.023978,H1HESC@0.0038745,HELAS3@0.005892,HEPG2@0.0028365,HMEC@0,HSMM@0.01094,HUVEC@0,K562@0.0618915,MCF7@0,NHEK@0.00172133,NHLF@0.010749,SKNSHRA@0.0083515, 0 0 0 0 ENSG00000174680.5 ENST00000413131.1 chr21:31132713-31136321 2 497 3109 intronic 0 1 0,0,0 0 0,0,0 0 43.3782566741718 0 16.364185110664 377.700868446446 0 21.3822937625755 387.272434866517 0 0 0 cat,chimp,dog,elephant,human,macaque,marmoset,orangutan,panda,pig,rabbit, antisense antisense A549@0.00283,AG04450@0.021358,BJ@0.0140865,GM12878@0.023978,H1HESC@0.0038745,HELAS3@0.005892,HEPG2@0.0028365,HMEC@0,HSMM@0.01094,HUVEC@0,K562@0.0618915,MCF7@0,NHEK@0.00172133,NHLF@0.010749,SKNSHRA@0.0083515, 0 0 0 0 ENSG00000227342.1 ENST00000451410.1 chr21:31581469-31584101 3 421 2207 intergenic 0 0 0,0,1 0 0,0,0 0 0 0 0 0 0 0 0 0 0 0 chimp,cow,human,macaque,marmoset,orangutan,panda, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000184586.4 ENST00000452750.1 chr21:32201357-32202078 1 721 0 intergenic 0.10 1 0,0,0 0 0,0,1 138.929264909847 0 15.18 149.169209431345 0 48.534 147.474341192788 0 45.06 0 0 cat,chimp,cow,dog,elephant,guinea_pig,horse,human,macaque,marmoset,opossum,orangutan,panda,rabbit, processed_transcript processed_transcript A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000237594.1 ENST00000433071.1 chr21:32931537-32932800 2 841 420 intergenic 10.35 1 1,1,1 1 0,0,0 52.6076099881094 36.6071428571429 65.02 83.4815695600476 63.5761904761905 145.651 72.0404280618312 63.1285714285714 139.008 0 0 chimp,elephant,human,macaque,marmoset,orangutan,pig,rabbit, lincRNA lincRNA A549@0.312814,AG04450@0,BJ@0,GM12878@1.6177,H1HESC@2.89185,HELAS3@0,HEPG2@0,HMEC@0.717162,HSMM@0.0980165,HUVEC@0.0185975,K562@0,MCF7@1.1026,NHEK@0.287962,NHLF@0,SKNSHRA@0.668592, 0 0 0 0 ENSG00000234509.1 ENST00000449339.1 chr21:33025906-33031813 3 2230 3673 intergenic 10.94 0 1,1,1 0 0,0,0 0 0 0 0.7152466367713 5.67002450313096 28.193 0.728699551569507 5.7900898448135 37.691 0 0 chimp,human,orangutan, lincRNA processed_transcript A549@0.204897,AG04450@0.105007,BJ@0.102547,GM12878@0.078485,H1HESC@0.267142,HELAS3@0.190753,HEPG2@0.422685,HMEC@0.009168,HSMM@0.058145,HUVEC@0.0586105,K562@0.333141,MCF7@0.289956,NHEK@0.058402,NHLF@0.0217675,SKNSHRA@0.147985, 0 0 0 0 ENSG00000237138.1 ENST00000437109.1 chr21:33393279-33394095 2 614 200 intronic -0.57 0 0,0,1 0 0,0,0 13.2752442996743 0 8.843 9.55211726384365 0 7.253 10.0830618892508 0 7.441 0 0 chimp,cow,guinea_pig,human,macaque,mouse,orangutan,panda, antisense antisense A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0.0033675,HELAS3@0.008617,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0.008733, 0 0 0 0 ENSG00000230323.1 ENST00000411605.1 chr21:33452629-33458608 3 435 5540 intergenic -1.22 1 0,0,1 0 0,0,0 25.4045977011494 4.76245487364621 0 20.8183908045977 7.64747292418773 16.418 24.7701149425287 8.04620938628159 17.721 0 0 chimp,cow,human,macaque,orangutan, lincRNA non_coding A549@0,AG04450@0,BJ@0.005525,GM12878@0,H1HESC@0.011563,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0.011362,K562@0.0061125,MCF7@0.00459,NHEK@0,NHLF@0,SKNSHRA@0.0159215, 0 0 0 0 ENSG00000230323.1 ENST00000414877.1 chr21:33452629-33570125 4 424 117066 intergenic -1.22 1 0,1,1 0 0,0,0 0 8.36036082210035 97.858 9.02122641509434 8.54742623819042 44.789 9.375 19.1917209095724 53.543 0 0 chimp,human,macaque,marmoset,orangutan, lincRNA non_coding A549@0,AG04450@0,BJ@0.005525,GM12878@0,H1HESC@0.011563,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0.011362,K562@0.0061125,MCF7@0.00459,NHEK@0,NHLF@0,SKNSHRA@0.0159215, 0 0 0 0 ENSG00000227256.1 ENST00000453549.1 chr21:33650174-33653299 3 766 2355 intronic -0.88 0 0,1,1 0 0,0,0 0 19.63991507431 0 0 28.672186836518 0 0 28.9702760084926 0 0 0 chimp,human,marmoset,orangutan,panda, antisense antisense A549@0.0207815,AG04450@0.10241,BJ@0.006403,GM12878@0.227103,H1HESC@0.065576,HELAS3@0.0526085,HEPG2@0.117652,HMEC@0.015974,HSMM@0.008893,HUVEC@0.0154135,K562@0.386788,MCF7@0.037135,NHEK@0.0183157,NHLF@0.0201575,SKNSHRA@0.13613, 0 0 0 0 ENSG00000232623.1 ENST00000450936.1 chr21:33678775-33681048 2 580 1691 exonic 3.90 1 0,0,0 0 0,0,0 0 0 0 42.3689655172414 0 0 44.748275862069 0 0 0 0 cat,chimp,human,macaque,marmoset,orangutan, antisense antisense A549@0.394284,AG04450@0.075006,BJ@0.299262,GM12878@0.216159,H1HESC@0.330008,HELAS3@0.266618,HEPG2@0.614578,HMEC@0.705432,HSMM@0.140757,HUVEC@0.76039,K562@0.669242,MCF7@0.711998,NHEK@0.511628,NHLF@0.0533805,SKNSHRA@0.820278, 0 0 0 0 ENSG00000186842.4 ENST00000334165.4 chr21:33944548-33948191 4 1774 1863 intergenic 7.12 0 0,0,0 0 0,0,1 0 0 0 0 0 0 0 0 0 0 0 chimp,human,macaque,marmoset,orangutan, lincRNA lincRNA A549@0.155099,AG04450@0.0148035,BJ@0.02301,GM12878@0.0082415,H1HESC@0.295304,HELAS3@0.0855475,HEPG2@0.115649,HMEC@0.004606,HSMM@0,HUVEC@0.042744,K562@0.007986,MCF7@0.026392,NHEK@0.037364,NHLF@0.0021705,SKNSHRA@0.103468, 0 0 0 0 ENSG00000238197.1 ENST00000458479.1 chr21:34100426-34105227 2 2943 1856 intergenic 2.35 0 0,1,1 0 0,0,0 15.6534148827727 0 94.626 13.5528372409106 2.4854525862069 339.832 13.8396194359497 2.60398706896552 87.943 0 0 human,orangutan, lincRNA processed_transcript A549@0.164583,AG04450@0.111737,BJ@0.0715445,GM12878@0.170483,H1HESC@0.076415,HELAS3@0.137678,HEPG2@0.163217,HMEC@0.162272,HSMM@0.202582,HUVEC@0.093421,K562@0.251124,MCF7@0.141092,NHEK@0.0553667,NHLF@0.149224,SKNSHRA@0.711582, 0 0 0 0 ENSG00000238197.1 ENST00000440052.1 chr21:34100450-34115433 4 3519 11458 exonic 2.35 1 1,1,1 0 0,0,0 17.5942028985507 69.6876418223076 87.906 19.7917021881216 57.1043812183627 100.832 20.6297243535095 56.377989177867 87.943 0 0 human,macaque,orangutan, lincRNA processed_transcript A549@0.164583,AG04450@0.111737,BJ@0.0715445,GM12878@0.170483,H1HESC@0.076415,HELAS3@0.137678,HEPG2@0.163217,HMEC@0.162272,HSMM@0.202582,HUVEC@0.093421,K562@0.251124,MCF7@0.141092,NHEK@0.0553667,NHLF@0.149224,SKNSHRA@0.711582, 0 0 0 0 ENSG00000238197.1 ENST00000455170.1 chr21:34102663-34109784 3 477 6640 exonic -4.23 0 0,0,0 0 0,0,0 33.3542976939203 110.946987951807 0 46.7735849056604 84.9631024096386 0 52.8553459119497 82.4331325301205 0 0 0 chimp,human,macaque,marmoset,orangutan, lincRNA processed_transcript A549@0.164583,AG04450@0.111737,BJ@0.0715445,GM12878@0.170483,H1HESC@0.076415,HELAS3@0.137678,HEPG2@0.163217,HMEC@0.162272,HSMM@0.202582,HUVEC@0.093421,K562@0.251124,MCF7@0.141092,NHEK@0.0553667,NHLF@0.149224,SKNSHRA@0.711582, 0 0 0 0 ENSG00000232360.1 ENST00000427911.1 chr21:34216677-34222244 2 382 5183 intronic -1.68 0 0,0,1 0 0,0,0 70.8219895287958 66.3536561836774 483.243 74.3246073298429 53.0879799344009 418.175 75.651832460733 49.9114412502412 431.818 0 0 chimp,human,macaque,marmoset,orangutan, antisense antisense A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000227757.1 ENST00000420356.1 chr21:34285957-34443410 2 680 156771 exonic 1.60 0 0,1,0 0 0,0,0 31.6323529411765 33.3153963424358 0 108.938235294118 29.0099890923704 0 100.729411764706 34.769102703944 0 0 0 chimp,cow,dog,elephant,horse,human,macaque,marmoset,orangutan,pig, antisense antisense A549@0,AG04450@0,BJ@0,GM12878@0.003437,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0.0051245,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000227757.1 ENST00000454622.1 chr21:34285957-34443410 2 680 156771 exonic 1.60 0 0,1,0 0 0,0,0 31.6323529411765 33.3153963424358 0 108.938235294118 29.0099890923704 0 100.729411764706 34.769102703944 0 0 0 chimp,cow,dog,elephant,horse,human,macaque,marmoset,orangutan,pig, antisense antisense A549@0,AG04450@0,BJ@0,GM12878@0.003437,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0.0051245,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000228961.1 ENST00000424837.1 chr21:34331196-34332874 2 574 1102 intergenic -7.51 1 0,1,1 0 0,0,0 29.6515679442509 0 0 9.36411149825784 0 4.614 9.67595818815331 0 6.408 0 0 chimp,elephant,human,macaque,marmoset,orangutan,pig, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000232539.1 ENST00000453716.1 chr21:34430135-34437289 5 748 6398 intergenic -3.02 0 0,0,0 0 0,0,0 378.998663101604 19.58487027196 0 294.986631016043 13.2605501719287 0 303.311497326203 16.0972178805877 0 0 0 cat,chimp,cow,dog,elephant,guinea_pig,horse,human,macaque,marmoset,mouse,orangutan,panda,rabbit,rat, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0.0065235,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000226527.1 ENST00000421051.1 chr21:34484005-34496009 3 1358 10642 intergenic 4.88 1 0,0,0 0 0,0,0 33.0618556701031 132.918624318737 0 17.1855670103093 88.0746100357076 0 13.9617083946981 95.1639729374178 0 0 0 chimp,elephant,horse,human,macaque,marmoset,orangutan,panda, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0.0078045,H1HESC@0,HELAS3@0.0184015,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000226433.1 ENST00000450830.1 chr21:34528938-34531416 2 447 2029 intergenic 5.07 0 0,0,0 0 0,0,0 0 0 0 0 20.1789058649581 0 0 24.3282405125678 0 0 0 human, antisense antisense A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000223799.1 ENST00000411998.1 chr21:34636178-34638565 2 2226 159 exonic 6.11 0 0,1,0 0 0,0,0 0 0 7.92 0.827044025157233 0 15.582 0.833333333333333 0 16.738 0 0 chimp,human,macaque,marmoset,orangutan, lincRNA processed_transcript A549@0.0313275,AG04450@0.0284315,BJ@0.0088025,GM12878@0.0940025,H1HESC@0.025359,HELAS3@0.0239455,HEPG2@0.0092585,HMEC@0.014702,HSMM@0.0196655,HUVEC@0.007037,K562@0.050233,MCF7@0.034804,NHEK@0.00576867,NHLF@0.0113265,SKNSHRA@0.050393, 0 0 0 0 ENSG00000231355.1 ENST00000450928.1 chr21:34854806-34856565 3 663 1092 intergenic -3.11 1 0,1,1 0 0,0,0 0 0 0 0 0 0 2.93212669683258 9.88369963369963 0 0 0 chimp,cow,dog,horse,human,macaque,marmoset,orangutan, antisense antisense A549@0.0082945,AG04450@0.0070725,BJ@0.0036335,GM12878@0,H1HESC@0.020964,HELAS3@0.021056,HEPG2@0.0159955,HMEC@0.018444,HSMM@0.006179,HUVEC@0,K562@0.0069725,MCF7@0.018523,NHEK@0.019364,NHLF@0,SKNSHRA@0.0155285, 0 0 0 0 ENSG00000237945.1 ENST00000427447.1 chr21:35303464-35349992 3 9121 37403 intergenic 5.01 1 0,1,1 0 0,0,0 0 16.8105232200626 0 4.80583269378358 13.2064272919285 0 5.45236267953075 14.9995187551801 0 0 0 chimp,human, lincRNA processed_transcript A549@0.0014965,AG04450@0.0271285,BJ@0.060051,GM12878@0.266716,H1HESC@0.778441,HELAS3@0.009953,HEPG2@0.00905,HMEC@0.59244,HSMM@0.045934,HUVEC@0.0739445,K562@1.07505,MCF7@0.09098,NHEK@0.417331,NHLF@0.114391,SKNSHRA@0.006335, 0 0 0 0 ENSG00000237945.1 ENST00000400353.2 chr21:35303518-35343487 3 2087 37878 intergenic 3.62 0 0,0,0 0 0,0,0 0 16.5997148740694 0 4.59894585529468 13.0408152489572 0 6.93627216099665 14.8114208775543 0 0 0 chimp,cow,dog,human,macaque,marmoset,orangutan,panda,rabbit, lincRNA processed_transcript A549@0.0014965,AG04450@0.0271285,BJ@0.060051,GM12878@0.266716,H1HESC@0.778441,HELAS3@0.009953,HEPG2@0.00905,HMEC@0.59244,HSMM@0.045934,HUVEC@0.0739445,K562@1.07505,MCF7@0.09098,NHEK@0.417331,NHLF@0.114391,SKNSHRA@0.006335, 0 0 0 0 ENSG00000205673.1 ENST00000381181.1 chr21:35321230-35336260 2 2259 12769 intergenic 0.79 0 0,1,0 0 0,0,0 0 1.16046675542329 137.474 0 3.2078471297674 93.75 2.55555555555556 7.99639752525648 88.97 0 0 chimp,human,macaque,marmoset, lincRNA lincRNA A549@0.00558,AG04450@0.0112935,BJ@0.0090935,GM12878@0.113161,H1HESC@0.365678,HELAS3@0.0096385,HEPG2@0.003423,HMEC@0.047808,HSMM@0.002142,HUVEC@0.015423,K562@0.182287,MCF7@0.0210615,NHEK@0.0649133,NHLF@0.0185485,SKNSHRA@0.00415, 0 0 0 0 ENSG00000227456.2 ENST00000428914.2 chr21:35552978-35555546 2 653 1913 intergenic 5.14 1 0,0,1 0 0,0,0 86.5114854517611 123.75378985886 78.279 20.9173047473201 25.2002090956613 49.464 16.9647779479326 31.8044955567172 50.096 0 0 cat,chimp,dog,horse,human,macaque,marmoset,orangutan,panda, lincRNA lincRNA A549@0.176144,AG04450@0.156362,BJ@0.251123,GM12878@0.423162,H1HESC@0.4846,HELAS3@0.100413,HEPG2@0.072458,HMEC@0.009957,HSMM@0.069352,HUVEC@0.201048,K562@0.292992,MCF7@0.180416,NHEK@0.0434333,NHLF@0.0919695,SKNSHRA@0.296164, 0 0 0 0 ENSG00000227456.2 ENST00000416145.1 chr21:35553045-35560863 2 394 7422 intergenic -1.72 0 0,0,1 0 0,0,0 85.4365482233503 67.3780652115333 110.908 12.4111675126904 39.4595796281326 63.123 13.1725888324873 43.7764753435732 61.174 0 0 cat,chimp,cow,dog,elephant,guinea_pig,horse,human,macaque,marmoset,orangutan,panda,pig,rabbit, lincRNA lincRNA A549@0.176144,AG04450@0.156362,BJ@0.251123,GM12878@0.423162,H1HESC@0.4846,HELAS3@0.100413,HEPG2@0.072458,HMEC@0.009957,HSMM@0.069352,HUVEC@0.201048,K562@0.292992,MCF7@0.180416,NHEK@0.0434333,NHLF@0.0919695,SKNSHRA@0.296164, 0 0 0 0 ENSG00000227456.2 ENST00000430922.1 chr21:35553049-35562220 2 1196 7973 intergenic 0.99 0 0,0,0 0 0,0,0 18.3235785953177 63.9507086416656 112.856 0 37.3459174714662 63.123 0 41.4021071115013 61.174 0 0 cat,chimp,dog,horse,human,macaque,marmoset,orangutan,pig, lincRNA lincRNA A549@0.176144,AG04450@0.156362,BJ@0.251123,GM12878@0.423162,H1HESC@0.4846,HELAS3@0.100413,HEPG2@0.072458,HMEC@0.009957,HSMM@0.069352,HUVEC@0.201048,K562@0.292992,MCF7@0.180416,NHEK@0.0434333,NHLF@0.0919695,SKNSHRA@0.296164, 0 0 0 0 ENSG00000227456.2 ENST00000419881.1 chr21:35560649-35561498 2 743 104 intergenic 4.33 0 0,0,0 0 0,0,0 13.1884253028264 0 117.684 2.12382234185733 0 97.125 2.1399730820996 0 102.705 0 0 chimp,cow,dog,guinea_pig,horse,human,macaque,marmoset,orangutan,pig,rabbit, lincRNA lincRNA A549@0.176144,AG04450@0.156362,BJ@0.251123,GM12878@0.423162,H1HESC@0.4846,HELAS3@0.100413,HEPG2@0.072458,HMEC@0.009957,HSMM@0.069352,HUVEC@0.201048,K562@0.292992,MCF7@0.180416,NHEK@0.0434333,NHLF@0.0919695,SKNSHRA@0.296164, 0 0 0 0 ENSG00000214955.4 ENST00000427022.1 chr21:35577356-35697334 5 800 119170 intergenic 4.81 0 0,1,0 0 0,0,0 0 16.6640933120752 16.12 0 12.1479650918855 7.101 0 12.9225979692876 7.464 0 0 cat,chimp,dog,elephant,horse,human,macaque,marmoset,mouse,orangutan,pig,rat, processed_transcript processed_transcript A549@0.090582,AG04450@0.073605,BJ@0.067221,GM12878@0.0999325,H1HESC@0.124679,HELAS3@0.012412,HEPG2@0.0646535,HMEC@0.104152,HSMM@0.136706,HUVEC@0.03788,K562@0.0509005,MCF7@0.105434,NHEK@0.046903,NHLF@0.0063385,SKNSHRA@0.155174, 0 0 0 0 ENSG00000225555.1 ENST00000440403.1 chr21:35743101-35747647 2 469 4075 exonic -1.85 0 0,1,0 0 0,0,0 17.4029850746269 7.58576687116564 0 10.4477611940299 0.645153374233129 9.241 11.7569296375267 0.655950920245399 12.385 0 0 cat,chimp,cow,dog,elephant,guinea_pig,horse,human,macaque,marmoset,orangutan,panda,pig, antisense antisense A549@0.129028,AG04450@0.144934,BJ@0.118707,GM12878@0.009953,H1HESC@0.300328,HELAS3@0.984951,HEPG2@0.237096,HMEC@0.3999,HSMM@0.0193595,HUVEC@0.0063185,K562@0.088903,MCF7@0.248617,NHEK@0.303889,NHLF@0.0537165,SKNSHRA@0.177971, 0 0 0 0 ENSG00000230978.1 ENST00000430635.1 chr21:36096105-36109478 6 687 12676 intergenic 2.84 1 0,1,1 0 0,0,0 0 3.28313348059325 0 0 9.08598927106343 0 0 10.0535657936257 0 0 0 chimp,dog,human,macaque,marmoset,orangutan, lincRNA lincRNA A549@0.017917,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0.005909,HSMM@0.0270425,HUVEC@0,K562@0,MCF7@0.081571,NHEK@0.053165,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000234380.1 ENST00000420877.1 chr21:36118054-36157183 3 2629 36496 intergenic 4.23 0 0,1,0 0 0,0,0 0 5.39138535729943 155.649 3.96462533282617 5.73994410346339 52.49 6.51654621529098 6.70596777729066 62.806 0 0 chimp,human,macaque,marmoset,orangutan, antisense antisense A549@0.0720065,AG04450@0.479165,BJ@0.123961,GM12878@0.004652,H1HESC@0.090137,HELAS3@0.363258,HEPG2@1.23163,HMEC@0.006223,HSMM@0.246893,HUVEC@0.013602,K562@0.0154515,MCF7@0.0320615,NHEK@0.0621367,NHLF@0.169694,SKNSHRA@0.037972, 0 0 0 0 ENSG00000234380.1 ENST00000419921.1 chr21:36118134-36120664 2 765 1763 intergenic -1.54 0 0,1,0 0 0,0,0 0 0 155.649 16.9581699346405 0 52.49 17.1477124183007 0 62.806 0 0 chimp,human,orangutan, antisense antisense A549@0.0720065,AG04450@0.479165,BJ@0.123961,GM12878@0.004652,H1HESC@0.090137,HELAS3@0.363258,HEPG2@1.23163,HMEC@0.006223,HSMM@0.246893,HUVEC@0.013602,K562@0.0154515,MCF7@0.0320615,NHEK@0.0621367,NHLF@0.169694,SKNSHRA@0.037972, 0 0 0 0 ENSG00000234703.1 ENST00000455028.1 chr21:36508935-36511519 2 696 1886 intergenic -12.97 0 0,0,0 0 0,0,0 275.900862068966 0 75.276 182.943965517241 0 64.825 192.489942528736 0.144220572640509 70.847 0 0 cat,chimp,dog,guinea_pig,horse,human,macaque,marmoset,opossum,orangutan,panda,rabbit, lincRNA lincRNA A549@0,AG04450@0.003374,BJ@0.0515575,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0.011732,HSMM@1.49738,HUVEC@0,K562@0.010556,MCF7@0,NHEK@0.138196,NHLF@0.008293,SKNSHRA@0.011691, 0 0 0 0 ENSG00000230794.1 ENST00000412240.1 chr21:37085437-37105240 2 347 19454 intergenic 1.83 0 0,0,0 0 0,0,0 0 7.72129125115657 0 0 20.1629998971934 4.02 0 35.3273876837668 5.28 0 0 chimp,human, processed_transcript processed_transcript A549@0,AG04450@0,BJ@0.0269345,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0.0060845,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000231106.1 ENST00000457157.1 chr21:37377636-37379899 2 809 1452 intergenic 2.05 0 1,1,1 0 0,0,0 0 0 0 0 0 0 0 0 0 0 0 chimp,human,macaque,marmoset,orangutan, antisense antisense A549@0,AG04450@0.0168625,BJ@0,GM12878@0,H1HESC@0.021531,HELAS3@0.006545,HEPG2@0.0160965,HMEC@0,HSMM@0,HUVEC@0,K562@0.0218655,MCF7@0,NHEK@0,NHLF@4.20598,SKNSHRA@0.005595, 0 0 0 0 ENSG00000251481.1 ENST00000503619.1 chr21:37426162-37481988 2 2122 53702 intronic 0.68 0 0,1,0 0 0,0,0 0 3.47217980708354 0 0 5.86564746191948 0 0 10.0522699340807 0 0 1 chimp,human,orangutan, lincRNA lincRNA A549@0.0020255,AG04450@0,BJ@0.0053185,GM12878@0,H1HESC@0.001214,HELAS3@0.001574,HEPG2@0.0003095,HMEC@0,HSMM@0,HUVEC@0.001418,K562@0,MCF7@0.0329915,NHEK@0,NHLF@0,SKNSHRA@0.0023755, 0 0 0 0 ENSG00000236677.1 ENST00000436303.1 chr21:37432730-37436706 3 443 3529 exonic 14.88 0 0,1,0 0 0,0,0 0 0 0 0 0 0 5.48532731376975 0 0 0 0 chimp,human,macaque, antisense antisense A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0.011901,HEPG2@0,HMEC@0.020885,HSMM@0,HUVEC@0,K562@0,MCF7@0.0090155,NHEK@0,NHLF@0,SKNSHRA@0.0060305, 0 0 0 0 ENSG00000230212.2 ENST00000535199.1 chr21:37441940-37498938 4 1217 55775 exonic 36.28 0 0,0,1 0 0,0,0 56.3327855382087 1.75107126848947 0 88.9860312243221 2.50086956521739 0 90.2161051766639 6.45423576871358 0 0 0 cat,chimp,elephant,horse,human,macaque,marmoset,opossum,orangutan,rabbit, processed_transcript processed_transcript A549@0,AG04450@0.010474,BJ@0.009106,GM12878@0,H1HESC@0.0491395,HELAS3@0.011857,HEPG2@0.04721,HMEC@0,HSMM@0.0030675,HUVEC@0.004855,K562@0.0106855,MCF7@0,NHEK@0.009078,NHLF@0.0008655,SKNSHRA@0.007474, 0 0 0 0 ENSG00000230212.2 ENST00000415147.1 chr21:37447179-37447900 2 157 562 intronic 0 0 0,0,0 0 0,0,0 0 0 0 0 0 0 0 0 0 0 0 chimp,human,macaque,orangutan, processed_transcript processed_transcript A549@0,AG04450@0.010474,BJ@0.009106,GM12878@0,H1HESC@0.0491395,HELAS3@0.011857,HEPG2@0.04721,HMEC@0,HSMM@0.0030675,HUVEC@0.004855,K562@0.0106855,MCF7@0,NHEK@0.009078,NHLF@0.0008655,SKNSHRA@0.007474, 0 0 0 0 ENSG00000236119.1 ENST00000445464.1 chr21:37455157-37462712 2 346 7207 intergenic -14.44 0 0,0,1 0 0,0,0 0 0 0 0 0 0 0 21.9707229082836 0 0 0 chimp,human,macaque,marmoset,orangutan, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0.005961,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000233393.1 ENST00000422473.1 chr21:37477179-37481988 2 2334 2473 intergenic 5.49 0 0,0,1 1 0,0,0 0 0 0 0 0 0 0 0 0 0 0 chimp,human,macaque,orangutan, lincRNA lincRNA A549@0,AG04450@0.007214,BJ@0.002108,GM12878@0,H1HESC@2.98142,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0.0017615,HUVEC@0,K562@0.0023335,MCF7@0,NHEK@0.0849957,NHLF@0.018348,SKNSHRA@0, 0 0 0 0 ENSG00000255739.1 ENST00000392371.2 chr21:37502670-37648524 2 1302 144550 intronic 0.03 0 0,0,1 0 0,0,0 731.016129032258 15.0367900380491 23.055 204.804147465438 14.9307021791768 24.678 571.012288786482 27.6729436181252 27.91 0 0 cat,chimp,cow,dog,elephant,guinea_pig,horse,human,macaque,marmoset,mouse,opossum,orangutan,panda,pig,platypus,rabbit,rat, lincRNA lincRNA A549@0.0470675,AG04450@0.02083,BJ@0.0442745,GM12878@0.023445,H1HESC@0.017142,HELAS3@0.074485,HEPG2@0.0098075,HMEC@0.003649,HSMM@0.00401,HUVEC@0.010304,K562@0.0074165,MCF7@0.144929,NHEK@0.0169313,NHLF@0.168253,SKNSHRA@0.0448615, 0 0 0 0 ENSG00000236830.1 ENST00000453159.1 chr21:37504065-37528605 3 1496 23040 exonic 3.84 0 1,1,1 1 0,0,0 100.802807486631 10.9405381944444 0 39.9659090909091 14.78671875 18.81 373.633689839572 17.8927083333333 22.796 0 0 chimp,dog,guinea_pig,human,macaque,marmoset,mouse,orangutan,rabbit,rat, lincRNA processed_transcript A549@0.176129,AG04450@0.576865,BJ@0.633673,GM12878@0.0240275,H1HESC@0.181201,HELAS3@0.37217,HEPG2@0.271049,HMEC@0.135028,HSMM@0.14015,HUVEC@0.158206,K562@0.058497,MCF7@6.95456,NHEK@0.4751,NHLF@0.89638,SKNSHRA@0.945145, 0 0 0 0 ENSG00000236830.1 ENST00000413862.1 chr21:37504084-37528593 4 1539 22964 exonic 3.84 0 1,1,1 1 0,0,0 88.8135152696556 10.9767462114614 0 36.053281351527 14.8356558090925 18.81 357.970110461339 17.9519247517854 22.796 0 0 chimp,dog,guinea_pig,human,macaque,marmoset,mouse,orangutan,rabbit,rat, lincRNA processed_transcript A549@0.176129,AG04450@0.576865,BJ@0.633673,GM12878@0.0240275,H1HESC@0.181201,HELAS3@0.37217,HEPG2@0.271049,HMEC@0.135028,HSMM@0.14015,HUVEC@0.158206,K562@0.058497,MCF7@6.95456,NHEK@0.4751,NHLF@0.89638,SKNSHRA@0.945145, 0 0 0 0 ENSG00000236830.1 ENST00000427491.1 chr21:37513694-37528604 3 738 14168 exonic -4.58 0 1,1,1 1 0,0,0 56.3414634146341 7.89243365330322 0 44.2642276422764 8.19184076792772 18.81 51.8346883468835 13.7628458498024 22.796 0 0 chimp,dog,human,macaque,marmoset,orangutan, lincRNA processed_transcript A549@0.176129,AG04450@0.576865,BJ@0.633673,GM12878@0.0240275,H1HESC@0.181201,HELAS3@0.37217,HEPG2@0.271049,HMEC@0.135028,HSMM@0.14015,HUVEC@0.158206,K562@0.058497,MCF7@6.95456,NHEK@0.4751,NHLF@0.89638,SKNSHRA@0.945145, 0 0 0 0 ENSG00000236830.1 ENST00000432988.1 chr21:37513705-37523008 3 4648 4651 exonic 5.20 0 0,0,1 0 0,0,0 15.9251290877797 17.1576005160181 0 17.2005163511188 10.9041066437325 0 19.2665662650602 26.774672113524 0 0 1 chimp,human,macaque, lincRNA retained_intron A549@0.176129,AG04450@0.576865,BJ@0.633673,GM12878@0.0240275,H1HESC@0.181201,HELAS3@0.37217,HEPG2@0.271049,HMEC@0.135028,HSMM@0.14015,HUVEC@0.158206,K562@0.058497,MCF7@6.95456,NHEK@0.4751,NHLF@0.89638,SKNSHRA@0.945145, 0 0 0 0 ENSG00000228107.1 ENST00000397184.2 chr21:37732928-37734338 2 594 814 intronic -9.65 0 0,1,0 0 0,0,0 0 0 106.564 0 0 173.714 231.13468013468 383.414004914005 163.15 0 0 chimp,human,macaque,marmoset,orangutan, processed_transcript processed_transcript A549@0.050129,AG04450@0.0840065,BJ@0.051682,GM12878@0.223143,H1HESC@0.025014,HELAS3@0.027218,HEPG2@0.053348,HMEC@0.031856,HSMM@0.013221,HUVEC@0.0369895,K562@0.224543,MCF7@0.020306,NHEK@0.113607,NHLF@0.0257095,SKNSHRA@0.0930505, 0 0 0 0 ENSG00000230479.1 ENST00000429588.1 chr21:37802658-37853368 2 891 49817 intronic 0.49 0 1,1,1 1 0,0,0 0 6.05656703534938 0 0 10.3861733946243 4.416 0 24.4753196699922 4.544 0 0 chimp,cow,human,macaque,marmoset,orangutan, antisense antisense A549@0.329558,AG04450@0.0630495,BJ@0.040234,GM12878@0.0015735,H1HESC@0.006518,HELAS3@0.0127395,HEPG2@0.0058475,HMEC@0.013609,HSMM@0.127608,HUVEC@2.40455,K562@0.0029935,MCF7@0.256026,NHEK@0.0759743,NHLF@0.004303,SKNSHRA@0.0487575, 0 0 0 0 ENSG00000233818.1 ENST00000428667.1 chr21:37818029-37904706 2 713 85962 intronic -0.60 0 0,0,1 0 0,0,0 0 7.86209022591378 0 0 12.2101975291408 12.42 0 29.5674251413415 12.512 0 0 cat,chimp,dog,elephant,horse,human,macaque,marmoset,orangutan, antisense antisense A549@1.13409,AG04450@0.070518,BJ@0.0371715,GM12878@0.015336,H1HESC@0,HELAS3@0.039604,HEPG2@0.051844,HMEC@0.11493,HSMM@0.163643,HUVEC@4.64511,K562@0.0545555,MCF7@0.242202,NHEK@0.372137,NHLF@0.014126,SKNSHRA@0.112456, 0 0 0 0 ENSG00000233818.1 ENST00000454980.1 chr21:37818120-37833050 2 647 14281 exonic 2.41 0 0,0,1 0 0,0,0 0 5.14879910370422 0 15.6661514683153 3.28310342412996 12.42 8.9984544049459 3.87066732021567 12.512 0 0 cat,chimp,horse,human,macaque,marmoset,orangutan,panda, antisense antisense A549@1.13409,AG04450@0.070518,BJ@0.0371715,GM12878@0.015336,H1HESC@0,HELAS3@0.039604,HEPG2@0.051844,HMEC@0.11493,HSMM@0.163643,HUVEC@4.64511,K562@0.0545555,MCF7@0.242202,NHEK@0.372137,NHLF@0.014126,SKNSHRA@0.112456, 0 0 0 0 ENSG00000231324.1 ENST00000457669.1 chr21:38004979-38009331 2 1131 3219 intergenic 2.85 1 0,0,0 0 0,0,0 0 0 0 0 0 8.581 0 2.53339546442995 9.121 0 0 chimp,dog,horse,human,marmoset,orangutan,panda, lincRNA lincRNA A549@0.138655,AG04450@0.0196985,BJ@0,GM12878@0,H1HESC@0,HELAS3@0.032605,HEPG2@0.00963,HMEC@0,HSMM@0.223556,HUVEC@0.01576,K562@0,MCF7@0.101189,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000224269.1 ENST00000430607.1 chr21:38071073-38073864 2 337 2452 intronic 0 0 0,1,0 0 0,0,0 0 58.9624796084829 0 0 94.9371941272431 0 9.06528189910979 77.7141109298532 0 0 0 cat,chimp,dog,elephant,horse,human,macaque,marmoset,orangutan,panda,rabbit, antisense antisense A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0.006418,HMEC@0,HSMM@0.135071,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000237646.1 ENST00000434195.1 chr21:38176285-38178585 2 529 1769 intronic 6.08 0 0,0,0 0 0,0,0 47.7429111531191 86.0101752402487 0 22.9017013232514 90.4804974561899 2.3 22.8676748582231 93.9412097230073 2.43 0 0 cat,chimp,dog,human,macaque,marmoset,orangutan,rabbit, sense_intronic sense_intronic A549@0.095736,AG04450@0.0831135,BJ@0.24453,GM12878@0.0514625,H1HESC@0.0326975,HELAS3@0.080364,HEPG2@0.0263395,HMEC@0,HSMM@0,HUVEC@0.0211315,K562@0.123585,MCF7@0.0071245,NHEK@0.084054,NHLF@0.007162,SKNSHRA@0.129279, 0 0 0 0 ENSG00000224790.1 ENST00000430068.1 chr21:38338812-38344128 4 434 4876 exonic 0 0 1,1,1 0 0,0,0 0 4.33962264150943 0 118.096774193548 4.83244462674323 29.078 124.870967741935 4.87510254306809 21.004 0 0 chimp,cow,elephant,horse,human,macaque,marmoset,orangutan,pig,rabbit, lincRNA lincRNA A549@0.54561,AG04450@0.156886,BJ@0.340251,GM12878@0.512015,H1HESC@0.783211,HELAS3@1.72782,HEPG2@0.974076,HMEC@0.149575,HSMM@0.104733,HUVEC@0.087664,K562@1.26763,MCF7@0.334758,NHEK@0.107114,NHLF@0.0931545,SKNSHRA@0.674124, 0 0 0 0 ENSG00000228677.1 ENST00000424733.1 chr21:38559967-38566227 2 1095 5163 exonic 4.47 0 0,1,0 0 0,0,0 0 9.91516560139454 0 12.2885844748858 3.10652721286074 0 11.7954337899543 5.50842533410808 0 0 0 chimp,elephant,human,macaque,marmoset,orangutan, antisense antisense A549@0,AG04450@0.0040865,BJ@0.0022445,GM12878@0,H1HESC@0,HELAS3@0.0123585,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0.0126995,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000230366.4 ENST00000454482.1 chr21:38580804-38594041 3 1645 11588 exonic 21.82 1 0,0,1 0 0,0,0 0 1.54815326199517 97.375 0 0 55.363 0 97.5046599930963 56.435 0 0 chimp,human,macaque,marmoset,orangutan, lincRNA processed_transcript A549@0.240125,AG04450@0.0696045,BJ@0.0401155,GM12878@0.143873,H1HESC@0.002591,HELAS3@0.17931,HEPG2@0.302202,HMEC@0.018812,HSMM@0.032817,HUVEC@0.0477515,K562@0.25885,MCF7@0.386946,NHEK@0.0173367,NHLF@0.017736,SKNSHRA@0.197928, 0 0 0 0 ENSG00000230366.4 ENST00000543267.1 chr21:38592889-38593843 1 954 0 intronic -2.69 0 0,0,0 0 0,0,0 0 0 0 0 0 0 0 0 0 1 1 chimp,human,macaque,marmoset,orangutan, lincRNA processed_transcript A549@0.240125,AG04450@0.0696045,BJ@0.0401155,GM12878@0.143873,H1HESC@0.002591,HELAS3@0.17931,HEPG2@0.302202,HMEC@0.018812,HSMM@0.032817,HUVEC@0.0477515,K562@0.25885,MCF7@0.386946,NHEK@0.0173367,NHLF@0.017736,SKNSHRA@0.197928, 0 0 0 0 ENSG00000242553.1 ENST00000440629.1 chr21:38593720-38610045 2 518 15805 intronic 2.01 0 1,1,1 1 0,0,0 0 10.1055362227143 0 0 13.9173046504271 0 0 16.7614046187915 0 0 0 chimp,human,macaque,marmoset,orangutan, lincRNA processed_transcript A549@0.113561,AG04450@0.043906,BJ@0.0304795,GM12878@0.0351155,H1HESC@0,HELAS3@0.237079,HEPG2@0.300235,HMEC@0.019123,HSMM@0.0312685,HUVEC@0.020876,K562@0.281248,MCF7@0.877201,NHEK@0.000843333,NHLF@0.017735,SKNSHRA@0.16955, 0 0 0 0 ENSG00000233213.1 ENST00000435001.1 chr21:39089405-39091872 2 355 2110 intronic -2.91 0 0,0,0 0 0,0,0 0 0 9.176 0 0 0 0 25.9563981042654 0 0 0 chimp,horse,human,macaque,orangutan,panda, sense_intronic sense_intronic A549@0.0358745,AG04450@0,BJ@0,GM12878@0,H1HESC@0.044664,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000223608.1 ENST00000417138.1 chr21:39378846-39382920 2 422 3650 intronic -4.80 0 0,0,1 0 0,0,0 10.8957345971564 3.01369863013699 0 3.62559241706161 1.65205479452055 1.673 3.86729857819905 2.96356164383562 1.757 0 0 chimp,human,macaque,marmoset,orangutan,panda, sense_intronic sense_intronic A549@0,AG04450@0,BJ@0,GM12878@0.003937,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@4.05776,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000233316.3 ENST00000432141.1 chr21:39578250-39580738 3 857 1627 intergenic 4.36 0 0,1,1 0 0,0,0 0 0 0 0 0 0 0 0 0 0 0 cat,chimp,dog,human,macaque,orangutan, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0.225815,MCF7@0.002391,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000233316.3 ENST00000538415.1 chr21:39580229-39580554 1 325 0 intergenic -3.18 0 0,0,0 0 0,0,0 0 0 0 0 0 0 0 0 0 0 1 chimp,human,macaque,orangutan, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0.225815,MCF7@0.002391,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000226012.1 ENST00000444977.1 chr21:39609139-39610123 2 285 697 intergenic 0 0 0,0,1 0 0,0,0 0 0 0 0 0 1.673 0 0 215.087 0 0 chimp,human,macaque,orangutan, lincRNA lincRNA A549@0.0192485,AG04450@0,BJ@0,GM12878@0.0210715,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0.0373935,HUVEC@0,K562@0,MCF7@0,NHEK@0.0133437,NHLF@0,SKNSHRA@0.009689, 0 0 0 0 ENSG00000231231.1 ENST00000414189.1 chr21:39695557-39705286 5 603 9118 intergenic 1.65 0 0,0,0 0 0,0,0 0 0 0 0 0 0 0 0 0 0 0 chimp,human,macaque,marmoset,orangutan, lincRNA lincRNA A549@0.00357,AG04450@0,BJ@0.0117695,GM12878@0.0055415,H1HESC@0,HELAS3@0.00873,HEPG2@0,HMEC@0,HSMM@0.156716,HUVEC@0.003999,K562@0,MCF7@0,NHEK@0.00209967,NHLF@0.0064185,SKNSHRA@0, 0 0 0 0 ENSG00000231231.1 ENST00000436845.1 chr21:39698274-39705343 4 419 6644 intergenic -0.56 0 0,0,0 0 0,0,0 0 0 0 0 0 0 0 0 0 0 0 chimp,elephant,human,macaque,marmoset,orangutan, lincRNA lincRNA A549@0.00357,AG04450@0,BJ@0.0117695,GM12878@0.0055415,H1HESC@0,HELAS3@0.00873,HEPG2@0,HMEC@0,HSMM@0.156716,HUVEC@0.003999,K562@0,MCF7@0,NHEK@0.00209967,NHLF@0.0064185,SKNSHRA@0, 0 0 0 0 ENSG00000223806.2 ENST00000426607.1 chr21:40110825-40124181 4 693 12657 intergenic -1.79 0 0,0,0 0 0,0,0 0 6.74196097021411 0 0 5.14703326222644 0 0 6.92304653551395 0 0 0 cat,chimp,horse,human,macaque,orangutan, lincRNA lincRNA A549@0,AG04450@0.00989,BJ@0.002704,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000223806.2 ENST00000448579.1 chr21:40110945-40113977 5 676 2348 intergenic 0.14 1 0,0,0 0 0,0,0 0 4.71763202725724 0 0 0 0 0 0.620954003407155 0 0 0 chimp,cow,horse,human,orangutan,panda, lincRNA lincRNA A549@0,AG04450@0.00989,BJ@0.002704,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000223806.2 ENST00000411989.1 chr21:40110945-40114441 4 1786 1704 intergenic 0.59 1 0,0,0 0 0,0,0 0 6.50058685446009 0 0 0 0 0 0.855633802816901 0 0 0 chimp,horse,human,marmoset,orangutan, lincRNA lincRNA A549@0,AG04450@0.00989,BJ@0.002704,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000223806.2 ENST00000429621.1 chr21:40110945-40119384 6 821 7608 intergenic 0.14 1 0,0,0 0 0,0,0 0 11.2162197686646 0 0 8.56282860147213 0 0 11.5174815983176 0 0 0 chimp,cow,horse,human,macaque,orangutan,panda, lincRNA lincRNA A549@0,AG04450@0.00989,BJ@0.002704,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000223806.2 ENST00000442549.1 chr21:40110945-40140898 6 887 29056 intergenic 0.14 1 0,0,0 0 0,0,0 0 2.93684609030837 5.082 0 2.91058645374449 5.627 0 4.76214895374449 7.198 0 0 chimp,horse,human,macaque,marmoset,orangutan,panda,pig, lincRNA lincRNA A549@0,AG04450@0.00989,BJ@0.002704,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000229986.1 ENST00000416842.1 chr21:40218171-40220568 2 485 1910 intergenic -3.84 1 0,0,0 0 0,0,0 0 0 0 0 0 0 0 0 0 0 0 chimp,human,macaque,marmoset,orangutan, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0.011202,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000205622.4 ENST00000380931.2 chr21:40249215-40310353 4 3819 57313 intergenic 2.49 0 0,0,0 0 0,0,0 0 2.99103170310401 0 10.6252945797329 3.45150314937274 3.36 12.5888976171773 4.91911084745171 3.424 0 0 chimp,human,macaque,orangutan, lincRNA lincRNA A549@0.0019475,AG04450@0.0056055,BJ@0.000633,GM12878@0,H1HESC@0,HELAS3@0.0175585,HEPG2@0.0088185,HMEC@0.002142,HSMM@0.0016145,HUVEC@0,K562@0,MCF7@0.003741,NHEK@0.00634033,NHLF@0.0020415,SKNSHRA@0.010556, 0 0 0 0 ENSG00000205622.4 ENST00000544859.1 chr21:40249215-40310353 3 3822 57312 intergenic 2.49 0 0,0,0 0 0,0,0 0 2.99108389168063 0 10.6169544740973 3.45156337241764 3.36 12.5790162218734 4.91919667783361 3.424 0 1 chimp,human,macaque,orangutan, lincRNA lincRNA A549@0.0019475,AG04450@0.0056055,BJ@0.000633,GM12878@0,H1HESC@0,HELAS3@0.0175585,HEPG2@0.0088185,HMEC@0.002142,HSMM@0.0016145,HUVEC@0,K562@0,MCF7@0.003741,NHEK@0.00634033,NHLF@0.0020415,SKNSHRA@0.010556, 0 0 0 0 ENSG00000205622.4 ENST00000415824.1 chr21:40252231-40328392 4 403 75752 intergenic 5.88 0 0,0,0 0 0,0,0 0 2.59511300031682 33.482 0 3.32399144577041 9.618 0 4.91561938958707 9.618 0 0 chimp,human,macaque,marmoset,orangutan, lincRNA lincRNA A549@0.0019475,AG04450@0.0056055,BJ@0.000633,GM12878@0,H1HESC@0,HELAS3@0.0175585,HEPG2@0.0088185,HMEC@0.002142,HSMM@0.0016145,HUVEC@0,K562@0,MCF7@0.003741,NHEK@0.00634033,NHLF@0.0020415,SKNSHRA@0.010556, 0 0 0 0 ENSG00000229925.1 ENST00000434589.1 chr21:40260696-40275829 2 286 14845 intergenic -5.63 0 0,0,0 0 0,0,0 21.7132867132867 3.68285618053217 0 62.9685314685315 3.4985517009094 0 75.3986013986014 5.50932974065342 0 0 0 chimp,cow,human,marmoset,mouse,opossum,orangutan,platypus, processed_transcript processed_transcript A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000234035.1 ENST00000440379.1 chr21:40285093-40287072 2 405 1572 intergenic 1.03 0 0,0,0 0 0,0,0 0 0 0 0 0 0 0 6.66094147582697 0 0 0 chimp,human,macaque,orangutan, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0.0227655,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000232837.1 ENST00000433952.1 chr21:40346355-40349700 3 1595 1746 intergenic 0.42 1 0,0,0 0 0,0,0 29.2833855799373 0 0 23.8990595611285 0 0 28.5605015673981 0 0 0 0 chimp,cow,elephant,human,macaque,marmoset, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0.015782,HELAS3@0.008149,HEPG2@0.0159995,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0.0170677,NHLF@0,SKNSHRA@0.0028445, 0 0 0 0 ENSG00000235888.1 ENST00000417335.1 chr21:40360633-40378079 3 1409 16033 intergenic -0.32 0 0,0,0 0 0,0,0 0 0 0 0 1.53676791617289 0 0 1.97405351462608 0 0 0 chimp,human,macaque,marmoset,orangutan, lincRNA lincRNA A549@0.00545,AG04450@0.021675,BJ@0.0034575,GM12878@0.0074625,H1HESC@0.1292,HELAS3@0.0827725,HEPG2@0.47504,HMEC@0.0058,HSMM@0.001457,HUVEC@0.175016,K562@0,MCF7@0.0185425,NHEK@0.172546,NHLF@0.0496395,SKNSHRA@0.0445135, 0 0 0 0 ENSG00000237721.1 ENST00000419664.1 chr21:40378574-40383255 3 506 4171 intergenic -0.97 0 0,0,0 0 0,0,0 0 0 0 0 0 0 0 0 0 0 0 chimp,human,macaque,orangutan, lincRNA lincRNA A549@0.045182,AG04450@0.043329,BJ@0,GM12878@0,H1HESC@0.348364,HELAS3@0.0931115,HEPG2@0.687349,HMEC@0,HSMM@0,HUVEC@0.004777,K562@0,MCF7@0,NHEK@0.133963,NHLF@0,SKNSHRA@0.0320755, 0 0 0 0 ENSG00000237609.1 ENST00000440714.1 chr21:40400461-40401053 2 290 300 intergenic -3.51 0 0,0,0 0 0,0,0 0 0 0 0 0 0 0 0 0 0 0 chimp,human,macaque,marmoset,orangutan, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0.0711225,H1HESC@0,HELAS3@0.157244,HEPG2@0.116314,HMEC@0,HSMM@0,HUVEC@0,K562@0.042056,MCF7@0,NHEK@0.084692,NHLF@0,SKNSHRA@0.0466875, 0 0 0 0 ENSG00000237373.1 ENST00000435608.1 chr21:40589019-40591731 2 487 2223 intronic -7.30 0 0,0,0 0 0,0,0 0 60.5861448493027 0 0 104.596041385515 0 0 120.277103013945 0 0 0 chimp,elephant,human,macaque,marmoset,orangutan, processed_transcript processed_transcript A549@0.127978,AG04450@0.30898,BJ@0.113935,GM12878@0.596321,H1HESC@0.365658,HELAS3@0.279767,HEPG2@0.554031,HMEC@0,HSMM@0,HUVEC@0.518772,K562@1.26517,MCF7@0.565327,NHEK@0.393572,NHLF@0,SKNSHRA@0.347992, 0 0 0 0 ENSG00000238141.2 ENST00000423274.2 chr21:40687633-40695144 3 688 6819 intergenic 1.82 0 0,0,0 0 0,0,0 0 0.888840005865963 12.32 0 2.56063938993987 0 0 2.59979469130371 0 0 0 chimp,cow,dog,horse,human,macaque,orangutan,panda, antisense antisense A549@0.0770515,AG04450@0.009333,BJ@0.0140495,GM12878@0.033801,H1HESC@0.08665,HELAS3@0.030063,HEPG2@0.122929,HMEC@0,HSMM@0.0059555,HUVEC@0.0404635,K562@0.153481,MCF7@0.14736,NHEK@0.00764233,NHLF@0,SKNSHRA@0.039575, 0 0 0 0 ENSG00000225330.1 ENST00000416555.1 chr21:41002198-41098012 3 541 95269 intronic 3.68 0 0,0,1 0 0,0,0 20.3327171903882 0.546757077328407 10.56 2.75046210720887 1.36325562355016 9.798 2.8724584103512 2.78815774281246 15.209 0 0 chimp,elephant,horse,human,macaque,orangutan, processed_transcript processed_transcript A549@0.0124065,AG04450@0,BJ@0,GM12878@0,H1HESC@0.021119,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0.0086995, 0 0 0 0 ENSG00000231713.2 ENST00000457325.1 chr21:41099682-41102607 3 1539 1382 intergenic -0.08 0 0,0,0 0 0,0,0 0 0 0 0 0 0 0 0 0 0 0 chimp,horse,human,marmoset,orangutan, lincRNA lincRNA A549@0,AG04450@0.009906,BJ@0.0015965,GM12878@0,H1HESC@0.476024,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0.0155385,HUVEC@0,K562@0,MCF7@0.0077035,NHEK@0,NHLF@0.0012515,SKNSHRA@0.0789715, 0 0 0 0 ENSG00000231713.2 ENST00000419826.2 chr21:41099773-41101611 2 697 1139 intergenic 2.95 0 0,0,0 0 0,0,0 0 0 0 0 0 0 0 0 0 0 0 cat,chimp,horse,human,macaque,marmoset,orangutan, lincRNA lincRNA A549@0,AG04450@0.009906,BJ@0.0015965,GM12878@0,H1HESC@0.476024,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0.0155385,HUVEC@0,K562@0,MCF7@0.0077035,NHEK@0,NHLF@0.0012515,SKNSHRA@0.0789715, 0 0 0 0 ENSG00000235123.1 ENST00000422749.1 chr21:41755010-41757285 3 1182 1089 intronic 1.05 0 0,0,0 0 0,0,0 0 0 0 0 0 0 0 0 0 0 0 chimp,human,macaque,marmoset,orangutan, antisense antisense A549@0.0023955,AG04450@0.0020425,BJ@0,GM12878@0,H1HESC@0,HELAS3@0.036267,HEPG2@0,HMEC@0.008079,HSMM@0,HUVEC@0,K562@0,MCF7@222.886,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000235123.1 ENST00000427451.1 chr21:41755010-41757285 3 1637 634 intronic 2.77 0 0,0,0 0 0,0,0 0 0 0 0 0 0 0 0 0 0 0 chimp,horse,human,macaque,marmoset,orangutan, antisense antisense A549@0.0023955,AG04450@0.0020425,BJ@0,GM12878@0,H1HESC@0,HELAS3@0.036267,HEPG2@0,HMEC@0.008079,HSMM@0,HUVEC@0,K562@0,MCF7@222.886,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000235123.1 ENST00000444046.1 chr21:41755010-41757285 2 1151 1122 intronic 8.77 0 0,0,0 0 0,0,0 0 0 0 0 0 0 0 0 0 0 0 chimp,human,macaque,marmoset, antisense antisense A549@0.0023955,AG04450@0.0020425,BJ@0,GM12878@0,H1HESC@0,HELAS3@0.036267,HEPG2@0,HMEC@0.008079,HSMM@0,HUVEC@0,K562@0,MCF7@222.886,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000235123.1 ENST00000455354.1 chr21:41755010-41757285 2 1280 993 intronic 0.89 0 0,0,0 0 0,0,0 0 0 0 0 0 0 0 0 0 0 0 chimp,human,macaque,marmoset,orangutan, antisense antisense A549@0.0023955,AG04450@0.0020425,BJ@0,GM12878@0,H1HESC@0,HELAS3@0.036267,HEPG2@0,HMEC@0.008079,HSMM@0,HUVEC@0,K562@0,MCF7@222.886,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000233756.1 ENST00000441910.1 chr21:41987304-42002693 4 460 14923 intronic 1.51 0 0,0,0 0 0,0,0 0 8.91348924478992 0 0 5.10587683441667 0 0 7.16886684982912 0 0 0 chimp,human,macaque,marmoset,orangutan, sense_intronic sense_intronic A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0.0322167,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000233756.1 ENST00000440363.1 chr21:41990433-42002693 4 716 11538 intronic 7.20 0 0,0,0 0 0,0,0 0 11.5285144739123 0 0 6.60383081989946 0 0 9.27205754896863 0 0 0 chimp,human,macaque,orangutan, sense_intronic sense_intronic A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0.0322167,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000226496.1 ENST00000441268.1 chr21:42513427-42520060 2 2086 4545 intergenic 4.02 1 0,0,0 0 0,0,0 16.9961649089166 0 0 5.51054650047939 0 7.729 5.6457334611697 0 10.032 0 0 chimp,horse,human,macaque,marmoset,orangutan,pig, antisense antisense A549@0.0047625,AG04450@0.001128,BJ@0.0041725,GM12878@0,H1HESC@0.018352,HELAS3@0.017036,HEPG2@0.006532,HMEC@0.001961,HSMM@0.0642495,HUVEC@0.181253,K562@0,MCF7@0.0009845,NHEK@0.0188047,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000226496.1 ENST00000435493.1 chr21:42515069-42519350 2 347 3932 intergenic 0.30 0 0,0,1 0 0,0,0 0 0 0 0 0 10.377 0 0 12.72 0 0 chimp,cow,human,macaque,marmoset,orangutan, antisense antisense A549@0.0047625,AG04450@0.001128,BJ@0.0041725,GM12878@0,H1HESC@0.018352,HELAS3@0.017036,HEPG2@0.006532,HMEC@0.001961,HSMM@0.0642495,HUVEC@0.181253,K562@0,MCF7@0.0009845,NHEK@0.0188047,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000226496.1 ENST00000446910.1 chr21:42515107-42519360 3 577 3672 intergenic 0.13 0 0,0,1 0 0,0,0 0 0 0 0 0 10.377 0 0 12.72 0 0 chimp,horse,human,macaque,marmoset,orangutan, antisense antisense A549@0.0047625,AG04450@0.001128,BJ@0.0041725,GM12878@0,H1HESC@0.018352,HELAS3@0.017036,HEPG2@0.006532,HMEC@0.001961,HSMM@0.0642495,HUVEC@0.181253,K562@0,MCF7@0.0009845,NHEK@0.0188047,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000225745.4 ENST00000430327.2 chr21:42548249-42558700 3 1008 9439 intronic 2.21 0 0,1,0 0 0,0,1 0 0 0 0 0 0 0 34.4246212522513 0 0 1 chimp,human,marmoset, processed_transcript processed_transcript A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0.00592,HELAS3@0.286632,HEPG2@0.0840305,HMEC@0,HSMM@0,HUVEC@0,K562@0.007646,MCF7@0.00906,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000225745.4 ENST00000440221.2 chr21:42548373-42558715 4 1000 9336 intronic 3.25 0 0,1,0 0 0,0,1 0 0 0 0 0 0 29.189 31.6160025706941 0 0 1 chimp,human,marmoset, processed_transcript processed_transcript A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0.00592,HELAS3@0.286632,HEPG2@0.0840305,HMEC@0,HSMM@0,HUVEC@0,K562@0.007646,MCF7@0.00906,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000225745.4 ENST00000536486.1 chr21:42551350-42558269 4 491 6422 intronic -11.11 0 0,1,0 0 0,0,1 0 0 0 0 0 0 150.364562118126 93.4867642478979 0 0 1 chimp,human,macaque,orangutan, processed_transcript processed_transcript A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0.00592,HELAS3@0.286632,HEPG2@0.0840305,HMEC@0,HSMM@0,HUVEC@0,K562@0.007646,MCF7@0.00906,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000224388.1 ENST00000433378.1 chr21:42552024-42552553 2 380 147 intronic 0 0 0,0,0 0 0,0,0 0 0 0 0 0 0 126.247368421053 255.578231292517 219.254 0 0 NA antisense antisense A549@0,AG04450@0.0164785,BJ@0,GM12878@0,H1HESC@0.0149905,HELAS3@0.0853305,HEPG2@0.016263,HMEC@0,HSMM@0,HUVEC@0.167434,K562@0,MCF7@0,NHEK@0.013616,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000225745.4 ENST00000414699.1 chr21:42552459-42558247 3 333 5451 intronic 0 0 0,1,1 0 0,0,1 0 0 0 0 0 0 35.5825825825826 1.32544487250046 0 0 0 NA processed_transcript processed_transcript A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0.00592,HELAS3@0.286632,HEPG2@0.0840305,HMEC@0,HSMM@0,HUVEC@0,K562@0.007646,MCF7@0.00906,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000228318.1 ENST00000411427.1 chr21:42813321-42814669 2 553 793 exonic 2.94 0 0,0,0 0 0,0,0 63.623869801085 0 0 95.3580470162749 6.01134930643127 0 117.573236889693 18.9861286254729 0 0 0 chimp,elephant,human,macaque,marmoset,mouse,orangutan,pig,rabbit,rat, antisense antisense A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0.008268,NHLF@0.0521495,SKNSHRA@0, 0 0 0 0 ENSG00000232806.1 ENST00000415820.1 chr21:42931052-42934885 3 419 3410 intergenic 1.05 0 0,0,1 0 0,0,0 0 0 0 0 0 0 0 0.712609970674487 0 0 0 chimp,human,macaque,marmoset,orangutan, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0.012514,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000223400.1 ENST00000418874.1 chr21:42948062-42953246 2 344 4838 intergenic -0.81 0 0,1,0 0 0,0,0 0 0 0 0 0 0 0 0 0 0 0 human,macaque,orangutan, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000227702.1 ENST00000413718.1 chr21:43099341-43117496 3 572 17579 intergenic 3.17 1 0,1,0 0 0,0,0 0 0.648956140849878 8.8 0 1.42590591046135 0 0 17.7867910575118 0 0 0 chimp,horse,human,macaque,orangutan, lincRNA lincRNA A549@0.754225,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0.103955,HEPG2@0.0416785,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0.126357,NHEK@0.0101643,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000236384.2 ENST00000412102.1 chr21:43131680-43135935 6 2027 2218 intergenic 4.80 0 0,1,1 1 0,0,0 0 0 0 0 0 4.32 0 0 4.448 0 0 chimp,human,marmoset,orangutan, lincRNA processed_transcript A549@0.051023,AG04450@0,BJ@0,GM12878@0,H1HESC@0.0095625,HELAS3@0.0929775,HEPG2@0.788436,HMEC@0.017222,HSMM@0,HUVEC@0,K562@0,MCF7@0.0262835,NHEK@0.0182873,NHLF@0,SKNSHRA@0.005582, 0 0 0 0 ENSG00000236384.2 ENST00000457881.1 chr21:43132317-43134215 4 556 1336 intergenic 1.78 0 0,0,0 0 0,0,0 0 0 0 0 0 0 0 0 0 0 0 chimp,human,macaque,orangutan, lincRNA processed_transcript A549@0.051023,AG04450@0,BJ@0,GM12878@0,H1HESC@0.0095625,HELAS3@0.0929775,HEPG2@0.788436,HMEC@0.017222,HSMM@0,HUVEC@0,K562@0,MCF7@0.0262835,NHEK@0.0182873,NHLF@0,SKNSHRA@0.005582, 0 0 0 0 ENSG00000232401.1 ENST00000432830.1 chr21:43136596-43137740 3 519 621 intergenic 1.56 1 0,0,0 0 0,0,0 0 0 0 0 0 4.32 0 0 4.448 0 0 chimp,human,marmoset,orangutan, antisense antisense A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0.103212,HEPG2@0.30139,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000236883.1 ENST00000423276.1 chr21:43159533-43161468 2 459 1474 exonic -6.97 0 1,1,1 0 0,0,0 88.7058823529412 19.5142469470828 0 135.442265795207 54.6370420624152 0 157.019607843137 55.3778833107191 0 0 0 cat,chimp,cow,dog,elephant,horse,human,macaque,marmoset,mouse,opossum,orangutan,panda,pig,platypus,rat, antisense antisense A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0.008452,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000236545.1 ENST00000458654.1 chr21:43290742-43292163 2 585 834 intronic 0.59 1 0,0,0 0 0,0,0 0 0 0 0 0 0 0 0 0 0 0 chimp,human,macaque,marmoset,orangutan, antisense antisense A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000227698.1 ENST00000432411.1 chr21:43294865-43297722 3 444 2409 intronic 0.35 0 0,0,1 0 0,0,0 0 0 0 0 0 0 0 0 0 0 0 chimp,human,macaque,marmoset,orangutan, sense_intronic sense_intronic A549@0.100633,AG04450@0.157231,BJ@0.0996465,GM12878@0.121117,H1HESC@0.025146,HELAS3@0.206659,HEPG2@0.219003,HMEC@0,HSMM@0.0293765,HUVEC@0.059736,K562@0.0729545,MCF7@0.13042,NHEK@0.203131,NHLF@0.53873,SKNSHRA@0.105468, 0 0 0 0 ENSG00000237232.2 ENST00000412906.1 chr21:43429303-43444975 2 950 14720 exonic 9.67 1 0,1,1 0 0,0,0 0 15.1432744565217 10.664 0 16.0601902173913 2.63 0 16.0574048913043 2.72 0 0 human,orangutan, lincRNA lincRNA A549@0,AG04450@0.0171415,BJ@0.022697,GM12878@0.0063525,H1HESC@0.0572015,HELAS3@0,HEPG2@0.0177685,HMEC@0,HSMM@0,HUVEC@0.006252,K562@0,MCF7@0.051462,NHEK@0.00411467,NHLF@0,SKNSHRA@0.0097985, 0 0 0 0 ENSG00000237232.2 ENST00000455701.1 chr21:43442132-43444975 2 748 2093 intergenic -1.11 1 0,0,1 0 0,0,0 0 0 0 0 0 3.968 0 0 4.144 0 0 chimp,human,marmoset, lincRNA lincRNA A549@0,AG04450@0.0171415,BJ@0.022697,GM12878@0.0063525,H1HESC@0.0572015,HELAS3@0,HEPG2@0.0177685,HMEC@0,HSMM@0,HUVEC@0.006252,K562@0,MCF7@0.051462,NHEK@0.00411467,NHLF@0,SKNSHRA@0.0097985, 0 0 0 0 ENSG00000237232.2 ENST00000429739.1 chr21:43442376-43445033 2 781 1874 intergenic -1.66 1 0,0,1 0 0,0,0 0 0 0 0 0 3.968 0 0 4.144 0 0 human, lincRNA lincRNA A549@0,AG04450@0.0171415,BJ@0.022697,GM12878@0.0063525,H1HESC@0.0572015,HELAS3@0,HEPG2@0.0177685,HMEC@0,HSMM@0,HUVEC@0.006252,K562@0,MCF7@0.051462,NHEK@0.00411467,NHLF@0,SKNSHRA@0.0097985, 0 0 0 0 ENSG00000239930.1 ENST00000416179.1 chr21:43916649-43917553 3 446 454 intronic -0.50 1 1,1,1 0 0,0,0 0 0 18.752 0 0 35.724 0 0 30.09 0 0 chimp,human,macaque,marmoset,orangutan, processed_transcript processed_transcript A549@0.105079,AG04450@0,BJ@0.023872,GM12878@0.122921,H1HESC@0.134054,HELAS3@0.0160085,HEPG2@0.01257,HMEC@0.054927,HSMM@0,HUVEC@0,K562@0.0597235,MCF7@0.136819,NHEK@0.043679,NHLF@0,SKNSHRA@0.0808175, 0 0 0 0 ENSG00000231867.1 ENST00000429903.1 chr21:43928734-43929771 2 385 650 intronic -1.44 0 0,0,1 0 0,0,0 0 0 0 0 0 5.523 0 0 5.838 0 0 chimp,human,macaque,orangutan, sense_intronic sense_intronic A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0.0247175,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000231867.1 ENST00000455116.1 chr21:43928744-43929768 2 448 574 intronic -1.44 0 0,0,1 0 0,0,0 0 0 0 0 0 5.523 0 0 5.838 0 0 chimp,human,macaque,orangutan, sense_intronic sense_intronic A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0.0247175,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000235772.1 ENST00000442605.1 chr21:43980484-43982044 2 573 985 intronic -2.94 0 0,1,1 0 0,0,0 0 0 13.57 0 0 30.628 0 0 45.682 0 0 chimp,human,macaque,marmoset,orangutan, antisense antisense A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0.0051685,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0.00444,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000225431.1 ENST00000419628.1 chr21:44019390-44035168 2 1773 14003 intergenic 5.78 0 0,1,1 0 0,0,0 0 0 0 0 0 0 0 0 0 0 0 chimp,horse,human,macaque,orangutan, lincRNA processed_transcript A549@0.0911505,AG04450@0,BJ@0,GM12878@0.122378,H1HESC@0.071686,HELAS3@0.064414,HEPG2@0.255225,HMEC@0.136103,HSMM@0.0815495,HUVEC@0,K562@0,MCF7@0.0183795,NHEK@0.187925,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000235023.1 ENST00000424890.1 chr21:44068381-44071354 2 2852 119 intergenic 6.35 0 0,1,0 0 0,0,0 0 0 0 0 0 0 0 0 0 0 0 chimp,human,orangutan, antisense antisense A549@0.01291,AG04450@0.0022595,BJ@0,GM12878@0.0020495,H1HESC@0.255096,HELAS3@0.0015835,HEPG2@0.0122265,HMEC@0,HSMM@0.001442,HUVEC@0,K562@0.00191,MCF7@0.021413,NHEK@0,NHLF@0.0013675,SKNSHRA@0.119378, 0 0 0 0 ENSG00000225731.1 ENST00000437426.1 chr21:44153704-44161868 2 1752 6410 intronic 4.04 0 0,1,1 0 0,0,0 0 3.18876755070203 0 0 1.43151326053042 0 0 1.49500780031201 0 0 0 chimp,human,macaque,marmoset,orangutan, antisense antisense A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0.0023655,HELAS3@0.0047595,HEPG2@0.080988,HMEC@0,HSMM@0.072525,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0.007713,SKNSHRA@0, 0 0 0 0 ENSG00000233754.1 ENST00000420273.1 chr21:44201184-44202343 2 786 371 intergenic 4.06 0 0,0,1 0 0,0,0 0 0 0 0 0 0 0 0 0 0 0 chimp,human,macaque,orangutan, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0.0409175,HELAS3@0.010594,HEPG2@0.222559,HMEC@0,HSMM@0,HUVEC@0.006171,K562@0,MCF7@0.005103,NHEK@0,NHLF@0,SKNSHRA@0.03745, 0 0 0 0 ENSG00000225218.1 ENST00000431150.1 chr21:44251150-44256587 3 282 5151 intergenic 0 0 0,0,0 0 0,0,0 0 0 0 0 0 0 0 0 50.564 0 0 chimp,human,orangutan, lincRNA lincRNA A549@0.0737075,AG04450@0.051937,BJ@0,GM12878@0.0626795,H1HESC@0.236469,HELAS3@0.422397,HEPG2@0.143294,HMEC@0,HSMM@0.0144395,HUVEC@0.0562185,K562@0.0760005,MCF7@0.376212,NHEK@0.0275683,NHLF@0,SKNSHRA@0.0348105, 0 0 0 0 ENSG00000233056.1 ENST00000447535.1 chr21:44336913-44345756 2 2788 6053 intergenic 5.04 1 1,1,1 0 0,0,0 0 0 0 0 0 0 0 0 0 0 0 chimp,human,macaque,marmoset,orangutan, antisense antisense A549@0,AG04450@0.007213,BJ@0.00433,GM12878@0.0031255,H1HESC@1.46603,HELAS3@1.14475,HEPG2@0.499247,HMEC@0,HSMM@0,HUVEC@0.009571,K562@0.103505,MCF7@0.008713,NHEK@0.015926,NHLF@0.0110805,SKNSHRA@0, 0 0 0 0 ENSG00000248623.1 ENST00000506728.1 chr21:44373890-44376488 2 2210 386 intergenic 5.56 0 0,0,0 0 0,0,0 0 0 0 0 0 0 0 0 0 0 1 chimp,human,orangutan, lincRNA lincRNA A549@0.008926,AG04450@0.014395,BJ@0.011422,GM12878@0.003969,H1HESC@0.043072,HELAS3@0.0180365,HEPG2@0.008826,HMEC@0,HSMM@0,HUVEC@0.019396,K562@0.005023,MCF7@0.0136395,NHEK@0.00949633,NHLF@0.001932,SKNSHRA@0.0182585, 0 0 0 0 ENSG00000224100.1 ENST00000428410.1 chr21:44384749-44385473 2 435 287 intergenic 8.20 1 0,0,0 0 0,0,0 0 0 0 0 0 0 0 0 0 0 0 chimp,human,macaque,marmoset,orangutan, antisense antisense A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0.011325,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0.0140105,NHEK@0,NHLF@0,SKNSHRA@0.0259595, 0 0 0 0 ENSG00000236663.1 ENST00000424933.1 chr21:44560633-44561202 2 420 147 intergenic 0 0 0,1,1 0 0,0,0 0 0 0 0 0 0 0 0 0 0 0 chimp,human,macaque,orangutan, antisense antisense A549@0,AG04450@0,BJ@0,GM12878@0.009554,H1HESC@0,HELAS3@0,HEPG2@0.0129275,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0.0242,NHLF@0,SKNSHRA@0.0053855, 0 0 0 0 ENSG00000237989.1 ENST00000442815.1 chr21:44778027-44782229 2 2796 1404 intergenic 8.07 1 0,1,1 1 0,0,0 0 0 0 0 0 0 0 0 0 0 0 chimp,human,macaque,orangutan, lincRNA processed_transcript A549@0.0019745,AG04450@0.412658,BJ@1.03917,GM12878@0.619316,H1HESC@0.0678275,HELAS3@0.0127155,HEPG2@0,HMEC@1.16901,HSMM@0.235552,HUVEC@0.337112,K562@0.0019485,MCF7@0.0548975,NHEK@0.540817,NHLF@0.391131,SKNSHRA@0.087713, 0 0 0 0 ENSG00000225637.1 ENST00000435702.1 chr21:44783212-44786446 2 2814 418 intergenic 10.29 0 0,0,0 0 0,0,0 0 0 0 0 0 0 0 0 0 0 0 chimp,human,marmoset,orangutan, lincRNA lincRNA A549@0,AG04450@0.012803,BJ@0.0017485,GM12878@0.0227355,H1HESC@0.004134,HELAS3@0.00349,HEPG2@0,HMEC@0.00727,HSMM@0.007972,HUVEC@0.0124115,K562@0,MCF7@0,NHEK@0.000691667,NHLF@0,SKNSHRA@0.0019105, 0 0 0 0 ENSG00000188660.3 ENST00000448049.1 chr21:44866481-44873773 4 3503 3783 intergenic 9.38 1 0,0,1 1 0,0,0 0 0 0 0.614045104196403 0 0 0.624322009705966 23.0806238435104 5.168 0 0 chimp,human,macaque,marmoset, lincRNA lincRNA A549@0.144759,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@1.5646,HEPG2@0.247529,HMEC@0.014112,HSMM@0.0106735,HUVEC@0,K562@0.0008915,MCF7@0.136694,NHEK@0.0327937,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000188660.3 ENST00000342757.2 chr21:44869904-44873773 3 3001 864 intergenic 3.97 1 0,1,1 0 0,0,0 0 0 0 0.71676107964012 0 0 0.728757080973009 0 87.314 1 1 chimp,human,macaque,marmoset,orangutan, lincRNA lincRNA A549@0.144759,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@1.5646,HEPG2@0.247529,HMEC@0.014112,HSMM@0.0106735,HUVEC@0,K562@0.0008915,MCF7@0.136694,NHEK@0.0327937,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000185186.4 ENST00000426942.1 chr21:44881974-44884853 2 267 2610 intergenic -0.04 0 0,0,0 0 0,0,0 0 0 0 0 2.24712643678161 0 0 2.33524904214559 0 0 0 chimp,human,macaque,marmoset,orangutan, lincRNA lincRNA A549@1.67156,AG04450@0.0226515,BJ@0.056917,GM12878@0,H1HESC@0.012102,HELAS3@1.55466,HEPG2@0.967554,HMEC@0.060663,HSMM@0.081985,HUVEC@0.052091,K562@0.0028185,MCF7@0.0312265,NHEK@0.407162,NHLF@0.0019955,SKNSHRA@0.0257745, 0 0 0 0 ENSG00000185186.4 ENST00000332440.3 chr21:44881974-44898103 4 575 15548 intergenic 6.83 0 0,0,0 1 0,0,0 0 0 0 0 0.75482377154618 0 0 1.13390789812195 0 0 0 chimp,human,orangutan, lincRNA lincRNA A549@1.67156,AG04450@0.0226515,BJ@0.056917,GM12878@0,H1HESC@0.012102,HELAS3@1.55466,HEPG2@0.967554,HMEC@0.060663,HSMM@0.081985,HUVEC@0.052091,K562@0.0028185,MCF7@0.0312265,NHEK@0.407162,NHLF@0.0019955,SKNSHRA@0.0257745, 0 0 0 0 ENSG00000185186.4 ENST00000413721.1 chr21:44881992-44884696 3 522 2178 intergenic 3.41 0 0,1,0 0 0,0,0 0 0 0 0 2.69283746556474 0 0 2.79843893480257 0 0 0 chimp,human,macaque,marmoset,orangutan, lincRNA lincRNA A549@1.67156,AG04450@0.0226515,BJ@0.056917,GM12878@0,H1HESC@0.012102,HELAS3@1.55466,HEPG2@0.967554,HMEC@0.060663,HSMM@0.081985,HUVEC@0.052091,K562@0.0028185,MCF7@0.0312265,NHEK@0.407162,NHLF@0.0019955,SKNSHRA@0.0257745, 0 0 0 0 ENSG00000185186.4 ENST00000418516.1 chr21:44881992-44884797 3 342 2459 intergenic -1.98 0 0,0,0 0 0,0,0 0 0 0 0 2.38511590077267 0 0 2.47864985766572 0 0 0 chimp,human,macaque,orangutan, lincRNA lincRNA A549@1.67156,AG04450@0.0226515,BJ@0.056917,GM12878@0,H1HESC@0.012102,HELAS3@1.55466,HEPG2@0.967554,HMEC@0.060663,HSMM@0.081985,HUVEC@0.052091,K562@0.0028185,MCF7@0.0312265,NHEK@0.407162,NHLF@0.0019955,SKNSHRA@0.0257745, 0 0 0 0 ENSG00000185186.4 ENST00000451543.1 chr21:44881992-44884797 4 409 2390 intergenic -1.98 0 0,0,0 0 0,0,0 0 0 0 6.23471882640587 1.28033472803347 0 6.47921760391198 1.33054393305439 0 0 0 chimp,human,macaque,orangutan, lincRNA lincRNA A549@1.67156,AG04450@0.0226515,BJ@0.056917,GM12878@0,H1HESC@0.012102,HELAS3@1.55466,HEPG2@0.967554,HMEC@0.060663,HSMM@0.081985,HUVEC@0.052091,K562@0.0028185,MCF7@0.0312265,NHEK@0.407162,NHLF@0.0019955,SKNSHRA@0.0257745, 0 0 0 0 ENSG00000223975.1 ENST00000436359.1 chr21:44885189-44887178 2 278 1709 intergenic 0 0 0,0,0 0 0,0,0 0 0 0 0 0 0 0 0 0 0 0 chimp,human,macaque,marmoset,orangutan, lincRNA lincRNA A549@0.011086,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0.00943,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000185186.4 ENST00000427188.1 chr21:44890313-44891472 2 965 192 intergenic 4.44 0 0,1,1 0 0,0,0 0 0 0 3.85492227979275 0 0 3.90155440414508 0 0 0 0 cat,chimp,cow,horse,human,marmoset,orangutan, lincRNA lincRNA A549@1.67156,AG04450@0.0226515,BJ@0.056917,GM12878@0,H1HESC@0.012102,HELAS3@1.55466,HEPG2@0.967554,HMEC@0.060663,HSMM@0.081985,HUVEC@0.052091,K562@0.0028185,MCF7@0.0312265,NHEK@0.407162,NHLF@0.0019955,SKNSHRA@0.0257745, 0 0 0 0 ENSG00000185186.4 ENST00000441283.1 chr21:44895805-44899414 4 444 3159 intergenic 11.37 0 0,0,1 0 0,0,0 0 0 0 0 1.2105096549541 0 0 6.70718581829693 1.215 0 0 chimp,human,macaque,orangutan, lincRNA lincRNA A549@1.67156,AG04450@0.0226515,BJ@0.056917,GM12878@0,H1HESC@0.012102,HELAS3@1.55466,HEPG2@0.967554,HMEC@0.060663,HSMM@0.081985,HUVEC@0.052091,K562@0.0028185,MCF7@0.0312265,NHEK@0.407162,NHLF@0.0019955,SKNSHRA@0.0257745, 0 0 0 0 ENSG00000215458.4 ENST00000437258.1 chr21:45225639-45230212 2 930 3641 intergenic 1.02 1 1,1,1 0 0,0,0 0 0 0 0 0 0 11.9752688172043 3.60450425707223 8.881 0 0 chimp,human,macaque,orangutan, antisense antisense A549@0.002377,AG04450@0.0029145,BJ@0.001062,GM12878@0.021594,H1HESC@0.002281,HELAS3@0.0033545,HEPG2@0.01357,HMEC@0.430634,HSMM@0.0077895,HUVEC@0.392521,K562@0,MCF7@0.0162615,NHEK@0.494794,NHLF@0.0004245,SKNSHRA@0.0034255, 0 0 0 0 ENSG00000215458.4 ENST00000448247.1 chr21:45225639-45230242 4 1885 2712 intergenic 13.26 1 1,1,1 0 0,0,0 0 0 0 0 0 0 5.90822281167109 4.83923303834808 8.881 0 0 chimp,human,macaque,orangutan, antisense antisense A549@0.002377,AG04450@0.0029145,BJ@0.001062,GM12878@0.021594,H1HESC@0.002281,HELAS3@0.0033545,HEPG2@0.01357,HMEC@0.430634,HSMM@0.0077895,HUVEC@0.392521,K562@0,MCF7@0.0162615,NHEK@0.494794,NHLF@0.0004245,SKNSHRA@0.0034255, 0 0 0 0 ENSG00000215458.4 ENST00000400385.2 chr21:45225639-45232448 2 4596 2211 intergenic 13.26 1 1,1,1 0 0,0,0 0 0 0 0 0 0 7.79264577893821 0 0 0 0 chimp,human,macaque,marmoset, antisense antisense A549@0.002377,AG04450@0.0029145,BJ@0.001062,GM12878@0.021594,H1HESC@0.002281,HELAS3@0.0033545,HEPG2@0.01357,HMEC@0.430634,HSMM@0.0077895,HUVEC@0.392521,K562@0,MCF7@0.0162615,NHEK@0.494794,NHLF@0.0004245,SKNSHRA@0.0034255, 0 0 0 0 ENSG00000215458.4 ENST00000543603.1 chr21:45228911-45230242 2 551 778 intergenic 13.26 0 0,1,1 0 0,0,0 0 0 0 0 0 0 0 16.8688946015424 8.881 1 1 chimp,human,macaque,marmoset,orangutan, antisense antisense A549@0.002377,AG04450@0.0029145,BJ@0.001062,GM12878@0.021594,H1HESC@0.002281,HELAS3@0.0033545,HEPG2@0.01357,HMEC@0.430634,HSMM@0.0077895,HUVEC@0.392521,K562@0,MCF7@0.0162615,NHEK@0.494794,NHLF@0.0004245,SKNSHRA@0.0034255, 0 0 0 0 ENSG00000225331.1 ENST00000411694.1 chr21:45578623-45579955 2 861 469 intergenic 1.98 1 1,1,1 0 0,0,0 0 0 0 0 0 0 0 0 0 0 0 chimp,human,macaque,marmoset,orangutan, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0.25592,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000225331.1 ENST00000424921.1 chr21:45578898-45579959 3 472 585 intergenic 0 0 0,1,1 0 0,0,0 0 0 0 0 0 0 0 0 0 0 0 chimp,human,macaque,marmoset,orangutan, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0.25592,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000237604.1 ENST00000411956.1 chr21:45595372-45596336 2 819 143 intergenic 1.44 0 0,1,1 0 0,0,0 0 0 0 5.90598290598291 0 0 6.08669108669109 0 0 0 0 chimp,human,macaque,marmoset,orangutan, lincRNA lincRNA A549@0.0801065,AG04450@0.028847,BJ@0.125548,GM12878@0.645766,H1HESC@0.0873995,HELAS3@0.0618905,HEPG2@0.0035685,HMEC@0,HSMM@0.005553,HUVEC@0.005923,K562@0.055859,MCF7@0.129439,NHEK@0,NHLF@0,SKNSHRA@0.15231, 0 0 0 0 ENSG00000232124.1 ENST00000437557.1 chr21:45621173-45622579 2 797 607 intergenic -2.10 0 0,0,1 0 0,0,0 0 0 0 0 0 0 0 0 0 0 0 chimp,human, antisense antisense A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0.0148775,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0.0113635, 0 0 0 0 ENSG00000232698.1 ENST00000423967.1 chr21:45626408-45627282 2 461 411 intergenic -0.18 0 0,1,1 1 0,0,0 0 0 0 0 0 2.868 0 0 3.012 0 0 chimp,human,macaque,orangutan, lincRNA lincRNA A549@0.0059655,AG04450@0,BJ@0.0309105,GM12878@2.34164,H1HESC@0,HELAS3@0.00488,HEPG2@0.0058915,HMEC@0,HSMM@0,HUVEC@0,K562@0.076185,MCF7@0,NHEK@0.014939,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000232010.1 ENST00000442785.1 chr21:45670696-45671403 2 521 184 exonic -1.11 1 0,0,1 0 0,0,0 14.7562380038388 17.5217391304348 0 49.4433781190019 22.179347826087 1.525 60.4145873320537 23.9728260869565 1.87 0 0 chimp,cow,guinea_pig,horse,human,macaque,marmoset,mouse,orangutan, antisense antisense A549@0.014749,AG04450@0,BJ@0.018669,GM12878@0.441783,H1HESC@0.0917975,HELAS3@0.828383,HEPG2@2.7568,HMEC@0,HSMM@0,HUVEC@0,K562@0.0360295,MCF7@0.0508455,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000184441.4 ENST00000448927.1 chr21:45751117-45755734 2 4352 263 exonic 8.43 0 0,0,1 0 0,0,0 6.30882352941176 135.513307984791 0 14.3235294117647 257.201520912547 30.958 15.6144301470588 267.665399239544 39.747 0 0 chimp,human,macaque,orangutan, processed_transcript processed_transcript A549@0.052366,AG04450@0.119579,BJ@0.231023,GM12878@0.19472,H1HESC@0.166595,HELAS3@0.611908,HEPG2@0.709599,HMEC@0.426797,HSMM@0.44101,HUVEC@0.457784,K562@0.053307,MCF7@0.483044,NHEK@0.247458,NHLF@0.204089,SKNSHRA@0.465702, 0 0 0 0 ENSG00000232969.1 ENST00000426029.1 chr21:45759259-45760353 2 125 967 exonic 0 0 0,1,0 0 0,0,0 0 0 18.02 0 0 55.895 0 0 64.806 0 0 chimp,human,macaque,orangutan, antisense antisense A549@0,AG04450@0,BJ@0,GM12878@0.0393655,H1HESC@0,HELAS3@0.0208975,HEPG2@0.0461395,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0.0316615,NHEK@0,NHLF@0,SKNSHRA@0.0423575, 0 0 0 0 ENSG00000230061.1 ENST00000423310.1 chr21:45834473-45845155 3 581 10097 intronic 2.29 1 0,1,1 0 0,0,0 0 7.57115975042092 0 0 13.0614043775379 22.23 0 36.5773992274933 30.243 0 0 human,macaque,orangutan, lincRNA processed_transcript A549@0.094433,AG04450@0,BJ@0,GM12878@0,H1HESC@0.0084745,HELAS3@0.317771,HEPG2@0.0152125,HMEC@0.603717,HSMM@0,HUVEC@0,K562@0.019189,MCF7@0,NHEK@0.02122,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000230061.1 ENST00000456880.1 chr21:45834478-45836623 2 2054 89 intronic 4.16 1 0,0,1 0 0,0,0 0 0 0 0 0 0 0 0 103.206 0 0 chimp,human,macaque,orangutan, lincRNA processed_transcript A549@0.094433,AG04450@0,BJ@0,GM12878@0,H1HESC@0.0084745,HELAS3@0.317771,HEPG2@0.0152125,HMEC@0.603717,HSMM@0,HUVEC@0,K562@0.019189,MCF7@0,NHEK@0.02122,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000229356.1 ENST00000426578.1 chr21:45870869-45875167 4 780 3512 intergenic 0 1 1,1,1 0 0,0,0 0 0 0 0 0 0 0 0.899487471526196 0 0 0 chimp,human,orangutan, antisense antisense A549@0.0228835,AG04450@0,BJ@0.0030865,GM12878@0,H1HESC@0.101562,HELAS3@0.159704,HEPG2@0.314707,HMEC@0.036559,HSMM@0.005815,HUVEC@0.021386,K562@0,MCF7@0.0946965,NHEK@0.0131933,NHLF@0.0049225,SKNSHRA@0.123508, 0 0 0 0 ENSG00000228709.1 ENST00000449713.1 chr21:45905460-45910171 2 910 3799 intergenic 4.42 0 0,1,0 1 0,0,0 0 0 0 0 0 0 0 0 0 0 0 chimp,human,macaque,orangutan, lincRNA processed_transcript A549@1.5392,AG04450@0.0100795,BJ@0.0294645,GM12878@0,H1HESC@11.7721,HELAS3@1.01602,HEPG2@7.5726,HMEC@0,HSMM@0,HUVEC@0.70371,K562@0.0337725,MCF7@0.042385,NHEK@0.0467933,NHLF@0.0917405,SKNSHRA@6.54712, 0 0 0 0 ENSG00000235890.1 ENST00000451035.1 chr21:45926690-45935738 6 1382 7656 exonic 10.97 0 0,0,1 0 0,0,0 7.41027496382055 6.48432601880878 0 24.2858176555716 4.08986415882968 0 36.7091172214182 15.3854493207942 0 0 0 cat,chimp,human,marmoset,orangutan, antisense antisense A549@0.335714,AG04450@0.0038295,BJ@0.006899,GM12878@0,H1HESC@2.15291,HELAS3@0.263545,HEPG2@1.64233,HMEC@0,HSMM@0,HUVEC@0.164392,K562@0,MCF7@0,NHEK@0.00285133,NHLF@0.0055765,SKNSHRA@2.64536, 0 0 0 0 ENSG00000235890.1 ENST00000430181.1 chr21:45930569-45935506 3 371 4562 intronic -3.39 0 0,0,1 0 0,0,0 0 9.00372643577378 0 0 2.74879438842613 6.885 0 19.5999561595791 6.993 0 0 chimp,human,macaque,marmoset,orangutan, antisense antisense A549@0.335714,AG04450@0.0038295,BJ@0.006899,GM12878@0,H1HESC@2.15291,HELAS3@0.263545,HEPG2@1.64233,HMEC@0,HSMM@0,HUVEC@0.164392,K562@0,MCF7@0,NHEK@0.00285133,NHLF@0.0055765,SKNSHRA@2.64536, 0 0 0 0 ENSG00000236519.1 ENST00000417820.1 chr21:46222492-46224632 2 1029 1109 intergenic 1.38 1 0,0,0 0 0,0,0 0 0 0 0 0 26.668 0 0 29.597 0 0 chimp,horse,human,marmoset,orangutan, antisense antisense A549@0.379674,AG04450@0.0717345,BJ@0.0400245,GM12878@0.414015,H1HESC@0.628114,HELAS3@2.35312,HEPG2@1.42192,HMEC@0.139003,HSMM@0.0385065,HUVEC@0.132742,K562@1.36617,MCF7@0.5292,NHEK@0.125759,NHLF@0.02639,SKNSHRA@0.480566, 0 0 0 0 ENSG00000227039.1 ENST00000441379.1 chr21:46340966-46349593 4 2278 6343 exonic 6.54 1 1,1,1 1 0,0,0 0 0 0 0.839332748024583 0.150717326186347 0 1.60359964881475 0.158284723317042 6.574 0 0 chimp,human,orangutan, lincRNA processed_transcript A549@0.485811,AG04450@0.001032,BJ@0,GM12878@13.7303,H1HESC@0.054542,HELAS3@0.227589,HEPG2@0.955078,HMEC@1.16451,HSMM@2.74519,HUVEC@0.329088,K562@0.685675,MCF7@0.361263,NHEK@0.248076,NHLF@0.0008455,SKNSHRA@0.68419, 0 0 0 0 ENSG00000227039.1 ENST00000429132.1 chr21:46341241-46347943 3 335 6363 intronic 0 0 0,0,1 0 0,0,0 0 0 0 0 0.488291686311488 0 0 0.512808423699513 6.574 0 0 chimp,human,macaque,marmoset,orangutan, lincRNA processed_transcript A549@0.485811,AG04450@0.001032,BJ@0,GM12878@13.7303,H1HESC@0.054542,HELAS3@0.227589,HEPG2@0.955078,HMEC@1.16451,HSMM@2.74519,HUVEC@0.329088,K562@0.685675,MCF7@0.361263,NHEK@0.248076,NHLF@0.0008455,SKNSHRA@0.68419, 0 0 0 0 ENSG00000234880.1 ENST00000439088.1 chr21:46409779-46413984 2 2133 2070 intergenic 23.15 1 0,0,0 0 0,0,0 0 0 0 0 5.01497584541063 0 48.1350210970464 11.0458937198068 0 0 0 chimp,human,macaque,orangutan, lincRNA lincRNA A549@0,AG04450@0.007562,BJ@0.0030315,GM12878@0,H1HESC@0.0019435,HELAS3@0.544141,HEPG2@0.0995115,HMEC@0.003836,HSMM@0.168436,HUVEC@0,K562@0.003451,MCF7@0,NHEK@0.00123533,NHLF@0.029751,SKNSHRA@0.0010645, 0 0 0 0 ENSG00000234880.1 ENST00000434081.1 chr21:46409779-46414001 2 2153 2067 intergenic 23.15 1 0,0,0 0 0,0,0 0 0 0 0 5.02225447508466 0 47.6878773803994 11.0619254958878 0 0 0 chimp,human,orangutan, lincRNA lincRNA A549@0,AG04450@0.007562,BJ@0.0030315,GM12878@0,H1HESC@0.0019435,HELAS3@0.544141,HEPG2@0.0995115,HMEC@0.003836,HSMM@0.168436,HUVEC@0,K562@0.003451,MCF7@0,NHEK@0.00123533,NHLF@0.029751,SKNSHRA@0.0010645, 0 0 0 0 ENSG00000224930.2 ENST00000422199.1 chr21:46419122-46424642 2 732 4786 intergenic 8.08 1 0,0,1 1 0,0,0 0 0 0 0 0 0 7.43032786885246 63.9149603008776 0 0 0 chimp,human,macaque,marmoset,orangutan, lincRNA non_coding A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@15.5074,HEPG2@3.83264,HMEC@0.85909,HSMM@3.59734,HUVEC@0.0040545,K562@0.0066925,MCF7@0,NHEK@0,NHLF@0.0053165,SKNSHRA@0, 0 0 0 0 ENSG00000182586.2 ENST00000328344.2 chr21:46654267-46678645 3 527 23847 intergenic 13.23 0 0,1,1 0 0,0,0 0 1.02126053591647 0 0 0.71707132972701 0 216.65275142315 17.1905061433304 6.804 0 0 chimp,human,orangutan, antisense antisense A549@0,AG04450@0.0111715,BJ@0.0046455,GM12878@0,H1HESC@0.008583,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0.0298385,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0.0052465, 0 0 0 0 ENSG00000215447.3 ENST00000454115.2 chr21:46707967-46710493 3 386 2136 intergenic 0 0 1,1,1 1 0,0,0 0 0 14.52 0 0 38.526 0 0 38.455 0 0 chimp,human,macaque,marmoset,orangutan, lincRNA processed_transcript A549@2.04025,AG04450@5.56376,BJ@5.21451,GM12878@0.602087,H1HESC@3.28564,HELAS3@2.92838,HEPG2@4.46764,HMEC@1.37542,HSMM@5.6738,HUVEC@4.16222,K562@2.42824,MCF7@6.17615,NHEK@1.60878,NHLF@3.65393,SKNSHRA@11.1669, 0 0 0 0 ENSG00000215447.3 ENST00000400362.2 chr21:46707977-46711653 3 1457 2215 intergenic 5.19 0 1,1,1 1 0,0,0 0 0 14.52 0 0 38.526 0 0 38.455 0 0 chimp,human,orangutan, lincRNA processed_transcript A549@2.04025,AG04450@5.56376,BJ@5.21451,GM12878@0.602087,H1HESC@3.28564,HELAS3@2.92838,HEPG2@4.46764,HMEC@1.37542,HSMM@5.6738,HUVEC@4.16222,K562@2.42824,MCF7@6.17615,NHEK@1.60878,NHLF@3.65393,SKNSHRA@11.1669, 0 0 0 0 ENSG00000223768.1 ENST00000433465.1 chr21:46713200-46717269 2 1389 2678 intergenic 3.00 1 0,1,1 0 0,1,0 0 0 0 0 0 3.315 0 0 3.367 0 1 chimp,human,macaque,orangutan, lincRNA non_coding A549@1.92681,AG04450@4.10592,BJ@2.70115,GM12878@0.637799,H1HESC@2.04457,HELAS3@3.65498,HEPG2@3.48633,HMEC@0.671153,HSMM@2.55494,HUVEC@2.84389,K562@1.91997,MCF7@5.91212,NHEK@1.39506,NHLF@2.54001,SKNSHRA@7.30535, 0 0 0 0 ENSG00000184274.3 ENST00000441947.1 chr21:46720160-46725172 3 2320 2688 intergenic 11.57 0 0,0,1 0 0,0,0 0 0 0 0 0 0 0 0 0 0 0 chimp,human,macaque, lincRNA lincRNA A549@0.0304945,AG04450@0.0081015,BJ@0.0093875,GM12878@0,H1HESC@0.003572,HELAS3@0.021227,HEPG2@0.058914,HMEC@0,HSMM@0.0872945,HUVEC@0.0435165,K562@0,MCF7@0,NHEK@0,NHLF@0.0058145,SKNSHRA@0, 0 0 0 0 ENSG00000229382.1 ENST00000445242.1 chr21:46756622-46758580 2 377 1579 intergenic -2.39 0 0,0,0 0 0,0,0 0 0 0 0 0 0 0 0 16.376 0 0 elephant,horse,human,macaque,orangutan, lincRNA lincRNA A549@0,AG04450@0.0312445,BJ@0,GM12878@0,H1HESC@0.0307155,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0.0323095,NHEK@0,NHLF@0,SKNSHRA@0.007337, 0 0 0 0 ENSG00000237664.1 ENST00000416722.1 chr21:46758505-46761905 2 453 2945 intergenic 8.17 0 0,0,1 0 0,0,0 0 0 0 0 1.03904923599321 0 0 1.07979626485569 0 0 0 chimp,human,macaque,orangutan, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0.05639,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0.0315333,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000228355.1 ENST00000456613.1 chr21:46798116-46799539 2 317 1104 intergenic -0.20 1 0,0,0 0 0,0,0 0 0 0 34.2145110410095 0 0 35.2870662460568 10.3650362318841 93.84 0 0 chimp,cow,elephant,horse,human,macaque,marmoset,orangutan, antisense antisense A549@0.0068045,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000228355.1 ENST00000416468.1 chr21:46798251-46799550 2 186 1111 intergenic 0 1 0,0,0 0 0,0,0 0 0 0 0 0 0 0 10.2997299729973 94.235 0 0 chimp,human,macaque,marmoset,orangutan, antisense antisense A549@0.0068045,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000224574.1 ENST00000446475.1 chr21:46827301-46829980 4 548 2125 intronic 0 0 0,1,0 0 0,0,0 28.7883211678832 1.28 0 41.029197080292 2.03294117647059 0 41.0419708029197 2.09317647058824 0 0 0 cat,chimp,horse,human,macaque,marmoset,orangutan, antisense antisense A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0.06547,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0.150151,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000183535.5 ENST00000397787.1 chr21:46839631-46844955 3 3422 1898 intronic 6.28 0 0,0,1 0 0,1,0 0 0 0 1.53506721215663 0 0 11.9494447691409 19.7887249736565 24.838 0 1 chimp,human,orangutan, lincRNA processed_transcript A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0.0080105,HEPG2@0.0070145,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0.00219,NHEK@0,NHLF@0.0023715,SKNSHRA@0, 0 0 0 0 ENSG00000183535.5 ENST00000485206.1 chr21:46839631-46844985 3 2338 3012 intronic 8.70 0 0,0,1 0 0,1,0 0 0 0 2.24679213002566 0 0 17.4897348160821 12.4697875166003 24.838 0 1 chimp,human,macaque,orangutan, lincRNA processed_transcript A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0.0080105,HEPG2@0.0070145,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0.00219,NHEK@0,NHLF@0.0023715,SKNSHRA@0, 0 0 0 0 ENSG00000233922.1 ENST00000441095.1 chr21:47013568-47016923 2 672 2681 intergenic 3.00 0 1,1,1 1 0,0,0 0 0 0 0 0 0 3.25446428571429 18.2584856396867 0 0 0 chimp,elephant,human,macaque,marmoset,mouse,orangutan,rat, lincRNA processed_transcript A549@0.0875455,AG04450@0.078089,BJ@0.0269485,GM12878@4.11953,H1HESC@0.76696,HELAS3@0.167212,HEPG2@0.523821,HMEC@0,HSMM@0.036826,HUVEC@0.05898,K562@7.10655,MCF7@0.0121345,NHEK@0.0205243,NHLF@0.025235,SKNSHRA@0.292664, 0 0 0 0 ENSG00000233922.1 ENST00000424569.1 chr21:47013592-47017005 3 818 2591 intergenic 3.00 0 0,1,0 1 0,0,0 0 0 0 0 0 0 2.67359413202934 18.8927055191046 0 0 0 chimp,elephant,human,macaque,marmoset,mouse,orangutan, lincRNA processed_transcript A549@0.0875455,AG04450@0.078089,BJ@0.0269485,GM12878@4.11953,H1HESC@0.76696,HELAS3@0.167212,HEPG2@0.523821,HMEC@0,HSMM@0.036826,HUVEC@0.05898,K562@7.10655,MCF7@0.0121345,NHEK@0.0205243,NHLF@0.025235,SKNSHRA@0.292664, 0 0 0 0 ENSG00000231820.1 ENST00000423045.1 chr21:47170542-47172900 3 746 1608 intronic 4.25 0 0,0,0 0 0,0,0 0 0 0 0 0 0 0 0 0 0 0 chimp,human,orangutan, sense_intronic sense_intronic A549@0.0007435,AG04450@0.013403,BJ@0.061642,GM12878@0.065252,H1HESC@0.28616,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0.0021825,HUVEC@0,K562@0.006379,MCF7@0.681343,NHEK@0.076441,NHLF@0,SKNSHRA@0.331724, 0 0 0 0 ENSG00000205424.1 ENST00000380008.1 chr21:47247875-47256333 3 3463 4991 intronic 5.12 0 0,0,1 0 0,0,0 0 0 0 0 0 0 0 0 0 0 0 chimp,human,orangutan, antisense antisense A549@0,AG04450@0.004513,BJ@0.004129,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0.042514,HUVEC@0,K562@0,MCF7@0.0011865,NHEK@0,NHLF@0,SKNSHRA@0.003932, 0 0 0 0 ENSG00000224413.1 ENST00000451618.1 chr21:47456966-47459721 2 2196 557 intergenic 10.70 0 0,0,1 0 0,0,0 0 0 0 0 0 0 0 0 0 0 0 chimp,human,orangutan, lincRNA lincRNA A549@0,AG04450@0.149931,BJ@0.195526,GM12878@0,H1HESC@0.060653,HELAS3@0.006213,HEPG2@0.104991,HMEC@0,HSMM@0.0058185,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0.0757025,SKNSHRA@0, 0 0 0 0 ENSG00000228235.1 ENST00000429512.1 chr21:47472510-47473019 2 413 94 intergenic 0 0 0,0,0 0 0,0,0 0 0 0 0 0 0 263.394673123487 0 17.04 0 0 chimp,cow,dog,horse,human,macaque,marmoset,orangutan,rabbit,rat, lincRNA lincRNA A549@0,AG04450@0.0162025,BJ@0,GM12878@0,H1HESC@0,HELAS3@0.010058,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0.442732,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000226115.1 ENST00000435738.1 chr21:47476430-47477481 2 353 696 intergenic 0 0 0,0,0 0 0,0,0 0 0 0 0 29.0387931034483 0 0 17.316091954023 22.848 0 0 chimp,human,macaque,marmoset,orangutan,panda, lincRNA lincRNA A549@0,AG04450@0.0250175,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000227438.1 ENST00000454245.1 chr21:47513178-47517444 2 670 3594 intergenic 4.55 0 0,1,0 0 0,0,0 0 0 0 0 0 0 0 0 44.889 0 0 human,macaque, antisense antisense A549@0,AG04450@0.207826,BJ@0.272167,GM12878@0.007903,H1HESC@0.142968,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0.112827,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0.274534,SKNSHRA@0.505193, 0 0 0 0 ENSG00000237338.1 ENST00000446649.1 chr21:47571528-47572561 2 498 533 exonic 18.43 0 0,0,0 0 0,0,0 0 0 0 86.7028112449799 41.780487804878 26.562 125.612449799197 54.8818011257036 35.09 0 0 chimp,human,marmoset,orangutan, antisense antisense A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0.008224,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000228404.1 ENST00000415026.1 chr21:47604993-47608855 2 555 3305 exonic -4.68 0 0,1,0 0 0,0,0 0 0 0 25.2774774774775 0 0 43.7189189189189 0 71.928 0 0 chimp,cow,dog,elephant,guinea_pig,human,macaque,opossum,orangutan,pig,platypus,rabbit, antisense antisense A549@0,AG04450@0.004024,BJ@0.0260675,GM12878@0.086418,H1HESC@0.011173,HELAS3@0.0243395,HEPG2@0.0369755,HMEC@0,HSMM@0.0040925,HUVEC@0.035445,K562@0.11288,MCF7@0.055288,NHEK@0,NHLF@0.010509,SKNSHRA@0.120091, 0 0 0 0 ENSG00000223901.1 ENST00000418029.1 chr21:47640183-47641992 2 523 1284 exonic 2.24 0 0,0,0 0 0,0,0 0 0 22.96 79.2925430210325 0 40.499 111.099426386233 23.8691588785047 55.629 0 0 chimp,human,macaque,marmoset,orangutan,rat, antisense antisense A549@0,AG04450@0,BJ@0.147935,GM12878@0.0055705,H1HESC@0,HELAS3@0.004452,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000215424.4 ENST00000414659.1 chr21:47649145-47671615 4 2535 19929 exonic 5.02 0 1,1,1 1 0,0,0 4.07889546351085 8.59767173465804 0 12.4903353057199 133.325605900948 19.15 12.4481262327416 156.14672085905 40.284 0 0 chimp,human,orangutan,panda, lincRNA processed_transcript A549@1.40338,AG04450@0.577236,BJ@0.291079,GM12878@2.35065,H1HESC@3.08568,HELAS3@5.00833,HEPG2@3.02809,HMEC@0.535032,HSMM@0.203424,HUVEC@0.773529,K562@9.83093,MCF7@4.60651,NHEK@1.04709,NHLF@0.606467,SKNSHRA@2.08399, 0 0 0 0 ENSG00000215424.4 ENST00000432735.1 chr21:47649148-47662913 3 2299 11462 exonic -1.64 0 1,1,1 1 0,0,0 19.0843845150065 4.62257895655209 0 25.2070465419748 9.6419473041354 19.15 21.8125271857329 9.55077647879951 40.284 0 0 chimp,human,orangutan, lincRNA processed_transcript A549@1.40338,AG04450@0.577236,BJ@0.291079,GM12878@2.35065,H1HESC@3.08568,HELAS3@5.00833,HEPG2@3.02809,HMEC@0.535032,HSMM@0.203424,HUVEC@0.773529,K562@9.83093,MCF7@4.60651,NHEK@1.04709,NHLF@0.606467,SKNSHRA@2.08399, 0 0 0 0 ENSG00000215424.4 ENST00000444998.1 chr21:47649154-47662913 2 2191 11566 exonic -1.64 0 1,1,1 1 0,0,0 20.0251026928343 4.58101331488847 0 26.4495664080329 9.55524814110323 19.15 22.887722501141 9.46489711222549 40.284 0 0 chimp,human,orangutan, lincRNA processed_transcript A549@1.40338,AG04450@0.577236,BJ@0.291079,GM12878@2.35065,H1HESC@3.08568,HELAS3@5.00833,HEPG2@3.02809,HMEC@0.535032,HSMM@0.203424,HUVEC@0.773529,K562@9.83093,MCF7@4.60651,NHEK@1.04709,NHLF@0.606467,SKNSHRA@2.08399, 0 0 0 0 ENSG00000215424.4 ENST00000455567.1 chr21:47649158-47671615 3 2322 20131 exonic 5.02 0 1,1,1 1 0,0,0 4.45305770887166 8.51140032785256 0 12.0986218776916 132.165118473995 19.15 11.9500430663221 154.76906263971 40.284 0 0 chimp,human,orangutan,panda, lincRNA processed_transcript A549@1.40338,AG04450@0.577236,BJ@0.291079,GM12878@2.35065,H1HESC@3.08568,HELAS3@5.00833,HEPG2@3.02809,HMEC@0.535032,HSMM@0.203424,HUVEC@0.773529,K562@9.83093,MCF7@4.60651,NHEK@1.04709,NHLF@0.606467,SKNSHRA@2.08399, 0 0 0 0 ENSG00000215424.4 ENST00000421927.1 chr21:47649161-47662913 2 2278 11472 exonic -1.64 0 1,1,1 1 0,0,0 19.2603160667252 4.61854951185495 0 25.4394205443371 9.63354253835425 19.15 22.013608428446 9.54245118549512 40.284 0 0 chimp,human,orangutan, lincRNA processed_transcript A549@1.40338,AG04450@0.577236,BJ@0.291079,GM12878@2.35065,H1HESC@3.08568,HELAS3@5.00833,HEPG2@3.02809,HMEC@0.535032,HSMM@0.203424,HUVEC@0.773529,K562@9.83093,MCF7@4.60651,NHEK@1.04709,NHLF@0.606467,SKNSHRA@2.08399, 0 0 0 0 ENSG00000215424.4 ENST00000420074.1 chr21:47649438-47655367 2 1945 3982 exonic 5.71 0 0,1,1 0 0,0,0 27.2411311053985 0 0 28.8056555269923 2.28076343545957 13.402 29.2946015424165 2.39527875439478 24.344 0 0 chimp,horse,human,macaque,marmoset,orangutan, lincRNA processed_transcript A549@1.40338,AG04450@0.577236,BJ@0.291079,GM12878@2.35065,H1HESC@3.08568,HELAS3@5.00833,HEPG2@3.02809,HMEC@0.535032,HSMM@0.203424,HUVEC@0.773529,K562@9.83093,MCF7@4.60651,NHEK@1.04709,NHLF@0.606467,SKNSHRA@2.08399, 0 0 0 0 ENSG00000228137.1 ENST00000444966.1 chr21:47666804-47667596 2 388 402 exonic -1.03 0 0,0,0 0 0,0,0 0 0 54.52 0.77319587628866 0 87.456 0 0 97.272 0 0 chimp,human,macaque,marmoset,orangutan, antisense antisense A549@0.03569,AG04450@0.103011,BJ@0.0301085,GM12878@0.128383,H1HESC@0.028282,HELAS3@0.269272,HEPG2@0.269836,HMEC@0.007073,HSMM@0,HUVEC@0.007614,K562@0.718264,MCF7@0.146826,NHEK@0.020353,NHLF@0.0075045,SKNSHRA@0.0599665, 0 0 0 0 ENSG00000239415.1 ENST00000430259.1 chr21:47671726-47674047 2 2012 307 intronic -0.89 0 0,1,1 0 0,0,0 0 0 0 0 0 58.821 0 0 58.825 0 0 chimp,human,macaque,orangutan, processed_transcript processed_transcript A549@0.229316,AG04450@0.130388,BJ@0.2882,GM12878@0.444636,H1HESC@0.417856,HELAS3@0.372083,HEPG2@0.446427,HMEC@0.114326,HSMM@0.1319,HUVEC@0.384111,K562@0.91613,MCF7@1.1065,NHEK@0.358974,NHLF@0.625749,SKNSHRA@0.371188, 0 0 0 0 ENSG00000245754.1 ENST00000499524.1 chr21:47874900-47878593 2 1527 2164 intergenic 7.67 0 1,1,1 1 0,0,0 0 0 0 0 0 54.082 0 0 84.24 0 1 chimp,human,macaque,orangutan, lincRNA lincRNA A549@0.377586,AG04450@0.279814,BJ@0.176227,GM12878@0.656872,H1HESC@0.529392,HELAS3@1.6155,HEPG2@1.0496,HMEC@0.25674,HSMM@0.073206,HUVEC@0.274509,K562@1.60382,MCF7@1.2323,NHEK@0.36581,NHLF@0.0498495,SKNSHRA@0.497964, 0 0 0 0 ENSG00000223692.1 ENST00000442434.1 chr21:47882384-47889219 4 424 6405 intronic -0.47 1 0,0,1 0 0,0,0 0 0 0 0 0.480874316939891 2.976 0 0.499453551912568 3.108 0 0 chimp,horse,human,macaque,orangutan, sense_intronic sense_intronic A549@0.0109525,AG04450@0,BJ@0,GM12878@0.0128465,H1HESC@0,HELAS3@0.0426435,HEPG2@0,HMEC@0.02659,HSMM@0,HUVEC@0.020718,K562@0.0558275,MCF7@0.041389,NHEK@0,NHLF@0,SKNSHRA@0.045299, 0 0 0 0 ENSG00000233866.1 ENST00000424770.1 chr22:16062157-16063236 2 584 493 intergenic 1.61 0 0,0,0 0 0,0,0 0 0 0 0 0 0 0 0 218.259 0 0 chimp,human,orangutan, lincRNA lincRNA A549@0.0209375,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000225255.2 ENST00000438574.1 chr22:16199666-16212276 3 516 12090 intergenic -0.50 0 0,0,0 0 0,0,0 0 0 0 0 0 0 0 49.5098428453267 0 0 0 chimp,human,macaque,orangutan, lincRNA lincRNA A549@0.09094,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0.004192,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0.007923,NHEK@0,NHLF@0,SKNSHRA@0.337195, 0 0 0 0 ENSG00000225255.2 ENST00000453395.1 chr22:16199666-16231333 3 621 31042 intergenic -2.82 0 0,0,0 0 0,0,0 0 0 0 0 0 0 0 49.634398556794 0 0 0 chimp,human,marmoset,orangutan, lincRNA lincRNA A549@0.09094,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0.004192,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0.007923,NHEK@0,NHLF@0,SKNSHRA@0.337195, 0 0 0 0 ENSG00000236666.1 ENST00000422014.1 chr22:16274560-16278602 2 2564 1476 exonic 1.04 1 0,0,0 0 0,0,0 0 0 0 3.79095163806552 0 0 3.98751950078003 0 0 0 0 chimp,cow,elephant,human,macaque,marmoset,orangutan,rabbit, antisense antisense A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0.0641555,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000230471.1 ENST00000428118.1 chr22:16373081-16377055 3 1727 2243 intergenic 2.18 0 0,0,0 0 0,0,0 0 0 0 0 5.78332590280874 0 0 6.05572893446277 0 0 0 chimp,human,macaque,marmoset,orangutan, lincRNA lincRNA A549@0.0265055,AG04450@0,BJ@0,GM12878@0.00271,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0.0046955,SKNSHRA@0.438254, 0 0 0 0 ENSG00000233408.1 ENST00000444162.1 chr22:16417269-16420386 3 1291 1822 intergenic 0.88 0 0,0,0 0 0,0,0 0 0 0 47.0201394268009 27.9121844127333 200.093 117.609604957397 46.0493962678375 352.212 0 0 cat,chimp,cow,dog,elephant,horse,human,macaque,mouse,opossum,orangutan,panda,rabbit,rat, antisense antisense A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0.00526, 0 0 0 0 ENSG00000100181.14 ENST00000400593.2 chr22:17082801-17129720 9 1421 45482 intergenic 6.45 1 1,1,1 1 0,1,0 0 0.414405698957829 0 0 5.21599753748736 67.643 110.389866291344 12.3771601952421 168.567 0 0 human, lincRNA lincRNA A549@0.001856,AG04450@0.000783,BJ@0.376357,GM12878@0.020932,H1HESC@0.0094125,HELAS3@0.140892,HEPG2@0.0228865,HMEC@2.78269,HSMM@0.821774,HUVEC@0.772919,K562@41.026,MCF7@0.021359,NHEK@5.23173,NHLF@0.97548,SKNSHRA@0.009333, 0 0 0 0 ENSG00000100181.14 ENST00000426585.1 chr22:17082934-17134699 5 5720 46037 intergenic 0.93 1 0,1,1 0 0,1,0 0 0.409409822534049 0 0 5.15311597193562 62.863 25.0237762237762 12.2279470860395 232.175 0 1 chimp,human,orangutan, lincRNA lincRNA A549@0.001856,AG04450@0.000783,BJ@0.376357,GM12878@0.020932,H1HESC@0.0094125,HELAS3@0.140892,HEPG2@0.0228865,HMEC@2.78269,HSMM@0.821774,HUVEC@0.772919,K562@41.026,MCF7@0.021359,NHEK@5.23173,NHLF@0.97548,SKNSHRA@0.009333, 0 0 0 0 ENSG00000100181.14 ENST00000438850.1 chr22:17097060-17098004 2 544 398 intergenic -3.70 0 0,0,0 0 0,0,0 0 0 0 31.2683823529412 0 72.543 32.8897058823529 0 75.36 0 0 cat,chimp,cow,dog,elephant,horse,human,macaque,marmoset,orangutan,panda,pig, lincRNA lincRNA A549@0.001856,AG04450@0.000783,BJ@0.376357,GM12878@0.020932,H1HESC@0.0094125,HELAS3@0.140892,HEPG2@0.0228865,HMEC@2.78269,HSMM@0.821774,HUVEC@0.772919,K562@41.026,MCF7@0.021359,NHEK@5.23173,NHLF@0.97548,SKNSHRA@0.009333, 0 0 0 0 ENSG00000100181.14 ENST00000383140.3 chr22:17100505-17134582 8 963 33100 intergenic -1.24 1 0,0,1 0 0,0,0 0 0 0 0 3.58945619335347 0 0 11.9086404833837 0 0 0 chimp,guinea_pig,human,macaque,marmoset,orangutan,pig, lincRNA lincRNA A549@0.001856,AG04450@0.000783,BJ@0.376357,GM12878@0.020932,H1HESC@0.0094125,HELAS3@0.140892,HEPG2@0.0228865,HMEC@2.78269,HSMM@0.821774,HUVEC@0.772919,K562@41.026,MCF7@0.021359,NHEK@5.23173,NHLF@0.97548,SKNSHRA@0.009333, 0 0 0 0 ENSG00000100181.14 ENST00000545818.1 chr22:17129698-17131830 1 2132 0 intergenic 0.47 0 0,0,0 0 0,0,0 0 0 0 0 0 0 25.750469043152 0 84.942 1 1 chimp,human,macaque,marmoset,orangutan, lincRNA lincRNA A549@0.001856,AG04450@0.000783,BJ@0.376357,GM12878@0.020932,H1HESC@0.0094125,HELAS3@0.140892,HEPG2@0.0228865,HMEC@2.78269,HSMM@0.821774,HUVEC@0.772919,K562@41.026,MCF7@0.021359,NHEK@5.23173,NHLF@0.97548,SKNSHRA@0.009333, 0 0 0 0 ENSG00000100181.14 ENST00000415121.1 chr22:17130820-17134695 3 1064 2807 intergenic 2.66 1 0,0,1 0 0,0,0 0 0 0 0 0 0 0 19.5582472390452 0 1 1 chimp,human,macaque,marmoset,orangutan, lincRNA lincRNA A549@0.001856,AG04450@0.000783,BJ@0.376357,GM12878@0.020932,H1HESC@0.0094125,HELAS3@0.140892,HEPG2@0.0228865,HMEC@2.78269,HSMM@0.821774,HUVEC@0.772919,K562@41.026,MCF7@0.021359,NHEK@5.23173,NHLF@0.97548,SKNSHRA@0.009333, 19 4 0 0 ENSG00000235343.1 ENST00000422917.1 chr22:17227759-17229535 2 1239 535 intergenic 10.01 0 0,0,0 0 0,0,0 0 0 0 0 0 0 0 0 0 0 0 chimp,human, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0.0042795,H1HESC@0,HELAS3@0.0037665,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0.0400735,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0.003663, 0 0 0 0 ENSG00000237689.1 ENST00000442403.1 chr22:17350368-17352016 2 498 1148 intergenic -0.00 0 0,0,0 0 0,0,0 0 0 0 0 0 0 0 0 0 0 0 chimp,dog,human,macaque,orangutan,panda,rabbit, lincRNA lincRNA A549@0.138345,AG04450@0.017608,BJ@0.0928985,GM12878@0.011698,H1HESC@0,HELAS3@0.459842,HEPG2@0.235287,HMEC@0,HSMM@0,HUVEC@0.196308,K562@0,MCF7@0.194353,NHEK@0.107345,NHLF@0,SKNSHRA@0.1029, 0 0 0 0 ENSG00000237438.1 ENST00000441006.1 chr22:17517460-17539682 4 2722 19494 intergenic 6.89 0 0,1,1 0 0,0,0 0 0 0 2.51212343864805 3.63440032830615 0 3.021675238795 12.0692520775623 0 0 0 chimp,human,macaque,orangutan, lincRNA lincRNA A549@0.617526,AG04450@0.0051355,BJ@0.774505,GM12878@2.69228,H1HESC@0.0698585,HELAS3@0.060338,HEPG2@0.0040025,HMEC@0.49215,HSMM@0.089547,HUVEC@0.0129235,K562@1.2328,MCF7@0.014398,NHEK@0.196231,NHLF@0.0021315,SKNSHRA@0.004726, 0 0 0 0 ENSG00000237438.1 ENST00000414401.1 chr22:17518102-17537448 4 542 18798 intergenic 0.46 0 0,1,0 0 0,0,0 0 0 0 12.6162361623616 3.7689647834876 0 24.1660516605166 12.2333226939036 0 0 0 cat,chimp,cow,dog,human,macaque,marmoset,mouse,orangutan, lincRNA lincRNA A549@0.617526,AG04450@0.0051355,BJ@0.774505,GM12878@2.69228,H1HESC@0.0698585,HELAS3@0.060338,HEPG2@0.0040025,HMEC@0.49215,HSMM@0.089547,HUVEC@0.0129235,K562@1.2328,MCF7@0.014398,NHEK@0.196231,NHLF@0.0021315,SKNSHRA@0.004726, 0 0 0 0 ENSG00000185837.3 ENST00000329743.3 chr22:17640274-17646329 2 337 5716 exonic 24.20 1 1,1,1 1 0,0,0 0 0 0 0 0 4.216 0 0 5.253 0 0 chimp,human,orangutan, antisense antisense A549@0.049287,AG04450@0.006947,BJ@0.0344635,GM12878@0.0527805,H1HESC@0.167672,HELAS3@0.038135,HEPG2@0.0132845,HMEC@0,HSMM@0,HUVEC@0.0096205,K562@0,MCF7@0.0362945,NHEK@0.011847,NHLF@0,SKNSHRA@0.193982, 0 0 0 0 ENSG00000185837.3 ENST00000431923.1 chr22:17640289-17646335 2 614 5430 exonic 4.80 1 1,1,1 1 0,0,0 0 0 0 0 0 4.216 0 0 5.253 0 0 chimp,human,marmoset,orangutan, antisense antisense A549@0.049287,AG04450@0.006947,BJ@0.0344635,GM12878@0.0527805,H1HESC@0.167672,HELAS3@0.038135,HEPG2@0.0132845,HMEC@0,HSMM@0,HUVEC@0.0096205,K562@0,MCF7@0.0362945,NHEK@0.011847,NHLF@0,SKNSHRA@0.193982, 0 0 0 0 ENSG00000236754.1 ENST00000443935.1 chr22:18062923-18071958 4 1834 7195 exonic 3.95 1 0,0,1 0 0,0,0 10.690294438386 12.2763029881862 16.939 22.9852780806979 20.832383599722 64.669 93.9367502726281 76.5837387074357 73.602 0 0 chimp,human,marmoset,orangutan, antisense antisense A549@0.0313875,AG04450@0.0409305,BJ@0.033677,GM12878@0.0547015,H1HESC@0.029058,HELAS3@0.0744365,HEPG2@0.0925205,HMEC@0.011139,HSMM@0.130613,HUVEC@0.02837,K562@0.0296395,MCF7@0.166608,NHEK@0.0987793,NHLF@0.089874,SKNSHRA@0.179837, 0 0 0 0 ENSG00000235445.1 ENST00000429618.1 chr22:18465971-18466385 2 359 53 intronic -13.09 0 0,0,1 0 0,0,0 0 0 0 0 0 6.226 0 0 12.676 0 0 human,macaque,marmoset,orangutan, sense_intronic sense_intronic A549@0.0640355,AG04450@0.0140165,BJ@0.0192455,GM12878@0.241248,H1HESC@0.0092795,HELAS3@0.045396,HEPG2@0.115035,HMEC@0,HSMM@0,HUVEC@0.180022,K562@0.058422,MCF7@0.187168,NHEK@0.184911,NHLF@0,SKNSHRA@0.0689805, 0 0 0 0 ENSG00000234913.1 ENST00000441167.1 chr22:18487036-18490074 2 2491 545 intronic 1.11 0 0,1,1 0 0,0,0 15.0281011641911 0 0 7.61300682456845 0 0 10.6306704134886 0 0 0 0 chimp,human,macaque,orangutan, sense_intronic sense_intronic A549@0.029378,AG04450@0.0063575,BJ@0.0146725,GM12878@0.001926,H1HESC@0.030603,HELAS3@0.048459,HEPG2@0.0705175,HMEC@0.002998,HSMM@0.000546,HUVEC@0.0030495,K562@0.006473,MCF7@0.0126405,NHEK@0.101475,NHLF@0,SKNSHRA@0.0092595, 0 0 0 0 ENSG00000235295.1 ENST00000443243.1 chr22:18512151-18520734 2 2377 6204 intergenic 0.55 0 0,0,0 0 0,0,0 0 4.9829142488717 0 0 5.53836234687298 0 0 5.69487427466151 0 0 0 chimp,human,macaque,marmoset,orangutan, lincRNA lincRNA A549@0.0189415,AG04450@0.00198,BJ@0.00207,GM12878@0,H1HESC@0.005232,HELAS3@0.109116,HEPG2@0.026126,HMEC@0.003442,HSMM@0.0081575,HUVEC@0,K562@0,MCF7@0.0017285,NHEK@0.159141,NHLF@0.0016405,SKNSHRA@0, 0 0 0 0 ENSG00000225335.1 ENST00000426483.1 chr22:18559293-18560563 2 803 465 intergenic -1.97 0 1,1,1 0 0,0,0 0 0 0 4.46450809464508 0 39.534 4.68866749688667 0 45.226 0 0 chimp,dog,human,macaque,marmoset,orangutan, antisense antisense A549@0.198155,AG04450@0.131406,BJ@0.117937,GM12878@1.35248,H1HESC@0.156703,HELAS3@0.774075,HEPG2@0.593866,HMEC@0.300103,HSMM@0.0938725,HUVEC@0.0640875,K562@0.84817,MCF7@0.524269,NHEK@0.294569,NHLF@0.0505775,SKNSHRA@0.293146, 0 0 0 0 ENSG00000187979.3 ENST00000456322.2 chr22:18660805-18686086 9 1850 23415 intronic 3.42 0 0,0,0 0 0,0,0 0 0 0 0 0 0 0 12.9116805466581 0 0 1 chimp,human,macaque,marmoset, antisense antisense A549@0.0337115,AG04450@0.005535,BJ@0,GM12878@0,H1HESC@0,HELAS3@0.008566,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0.0043465,MCF7@0,NHEK@0,NHLF@0.0010495,SKNSHRA@0.0012225, 0 0 0 0 ENSG00000187979.3 ENST00000434390.1 chr22:18660805-18688682 9 1850 26011 intronic 3.42 0 0,0,0 0 0,0,0 0 0 0 0 0 0 0 11.6230440967283 0 0 0 chimp,human,macaque,marmoset, antisense antisense A549@0.0337115,AG04450@0.005535,BJ@0,GM12878@0,H1HESC@0,HELAS3@0.008566,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0.0043465,MCF7@0,NHEK@0,NHLF@0.0010495,SKNSHRA@0.0012225, 17 4 11 4 ENSG00000187979.3 ENST00000440673.2 chr22:18667739-18685129 11 1288 16082 intronic 5.78 0 0,0,0 0 0,0,0 0 0 0 0 0 0 108.14751552795 10.054595199602 0 0 1 chimp,human,macaque, antisense antisense A549@0.0337115,AG04450@0.005535,BJ@0,GM12878@0,H1HESC@0,HELAS3@0.008566,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0.0043465,MCF7@0,NHEK@0,NHLF@0.0010495,SKNSHRA@0.0012225, 0 0 0 0 ENSG00000161103.6 ENST00000416498.1 chr22:18840389-18842446 3 356 1697 intergenic -5.86 0 0,0,1 0 0,0,0 0 0 0 88.4887640449438 57.366529169122 0 151.01404494382 62.7112551561579 0 0 0 cat,chimp,dog,horse,human,macaque,marmoset,orangutan,panda,pig, processed_transcript processed_transcript A549@0.037211,AG04450@0.0258465,BJ@0.0292915,GM12878@0.000897,H1HESC@0.0592505,HELAS3@0,HEPG2@0.002976,HMEC@0.002767,HSMM@0.0105845,HUVEC@0,K562@0.000921,MCF7@0.00443,NHEK@0,NHLF@0.0066755,SKNSHRA@0.007866, 0 0 0 0 ENSG00000255848.1 ENST00000544384.1 chr22:18927009-18935205 2 1154 7040 intergenic 2.91 0 0,0,0 0 0,0,0 0 0 0 0 0 0 0 0 0 0 0 NA lincRNA lincRNA A549@0.087084,AG04450@0.02366,BJ@0.0146895,GM12878@0.0410675,H1HESC@13.1053,HELAS3@0.0309755,HEPG2@0.0464255,HMEC@0.007084,HSMM@0.026455,HUVEC@0.021183,K562@0.0132055,MCF7@0.029921,NHEK@0.190191,NHLF@0.01009,SKNSHRA@0.039284, 95 2 0 0 ENSG00000237517.3 ENST00000438934.1 chr22:18958027-18982141 5 5487 18619 intergenic 17.85 1 1,1,1 1 0,0,0 0 1.97679789462377 0 18.2587935119373 10.3296632472206 41.205 67.1421541826135 21.0044578119126 58.03 0 0 chimp,human,marmoset, antisense non_coding A549@0.959601,AG04450@0.003627,BJ@0.0167815,GM12878@0.0047025,H1HESC@1.79154,HELAS3@0.124465,HEPG2@0.070391,HMEC@0.340461,HSMM@0.014051,HUVEC@0.0151165,K562@0.009594,MCF7@0.174573,NHEK@0.375838,NHLF@0.0035475,SKNSHRA@0.265238, 0 0 0 0 ENSG00000237517.3 ENST00000440005.1 chr22:18958038-19018742 6 1280 59414 intergenic 22.45 1 0,1,0 1 0,0,0 0 0.619483623388427 0 77.60859375 5.68313865418925 46.166 204.4875 12.1945669370855 63.442 0 0 cat,chimp,dog,horse,human,marmoset, antisense non_coding A549@0.959601,AG04450@0.003627,BJ@0.0167815,GM12878@0.0047025,H1HESC@1.79154,HELAS3@0.124465,HEPG2@0.070391,HMEC@0.340461,HSMM@0.014051,HUVEC@0.0151165,K562@0.009594,MCF7@0.174573,NHEK@0.375838,NHLF@0.0035475,SKNSHRA@0.265238, 0 0 0 0 ENSG00000237517.3 ENST00000421572.1 chr22:18958096-18978396 4 564 19730 intergenic 20.35 0 0,1,1 1 0,0,0 0 1.86548403446528 0 59.9734042553191 9.74799797263051 72.324 319.959219858156 16.7904206791688 91.978 0 0 cat,chimp,dog,elephant,guinea_pig,horse,human,macaque,marmoset,opossum,orangutan,panda,rabbit, antisense antisense A549@0.959601,AG04450@0.003627,BJ@0.0167815,GM12878@0.0047025,H1HESC@1.79154,HELAS3@0.124465,HEPG2@0.070391,HMEC@0.340461,HSMM@0.014051,HUVEC@0.0151165,K562@0.009594,MCF7@0.174573,NHEK@0.375838,NHLF@0.0035475,SKNSHRA@0.265238, 0 0 0 0 ENSG00000237517.3 ENST00000399539.3 chr22:18973215-18973941 1 726 0 intergenic 25.86 0 0,0,0 0 0,0,0 0 0 0 0 0 0 173.257575757576 0 0 0 0 chimp,cow,human,macaque,marmoset,mouse,orangutan,rat, antisense antisense A549@0.959601,AG04450@0.003627,BJ@0.0167815,GM12878@0.0047025,H1HESC@1.79154,HELAS3@0.124465,HEPG2@0.070391,HMEC@0.340461,HSMM@0.014051,HUVEC@0.0151165,K562@0.009594,MCF7@0.174573,NHEK@0.375838,NHLF@0.0035475,SKNSHRA@0.265238, 0 0 0 0 ENSG00000237517.3 ENST00000537283.1 chr22:18979510-18980156 1 646 0 intergenic 17.85 0 0,0,0 0 0,0,0 0 0 0 0 0 27.355 0 0 79.698 0 0 chimp,cow,human,macaque,marmoset, antisense antisense A549@0.959601,AG04450@0.003627,BJ@0.0167815,GM12878@0.0047025,H1HESC@1.79154,HELAS3@0.124465,HEPG2@0.070391,HMEC@0.340461,HSMM@0.014051,HUVEC@0.0151165,K562@0.009594,MCF7@0.174573,NHEK@0.375838,NHLF@0.0035475,SKNSHRA@0.265238, 0 0 0 0 ENSG00000237517.3 ENST00000424407.1 chr22:18985787-19002299 5 763 15741 intergenic 2.85 0 0,0,0 0 0,0,0 0 0 0 14.9515072083879 0.945302077377549 0 15.6146788990826 3.16358554094403 0 0 0 chimp,dog,human,macaque,marmoset, antisense antisense A549@0.959601,AG04450@0.003627,BJ@0.0167815,GM12878@0.0047025,H1HESC@1.79154,HELAS3@0.124465,HEPG2@0.070391,HMEC@0.340461,HSMM@0.014051,HUVEC@0.0151165,K562@0.009594,MCF7@0.174573,NHEK@0.375838,NHLF@0.0035475,SKNSHRA@0.265238, 0 0 0 0 ENSG00000237517.3 ENST00000540720.1 chr22:18985788-18987264 1 1476 0 intergenic 0.22 0 0,0,0 0 0,0,0 0 0 0 0 0 0 0 0 0 0 1 chimp,human,macaque, antisense antisense A549@0.959601,AG04450@0.003627,BJ@0.0167815,GM12878@0.0047025,H1HESC@1.79154,HELAS3@0.124465,HEPG2@0.070391,HMEC@0.340461,HSMM@0.014051,HUVEC@0.0151165,K562@0.009594,MCF7@0.174573,NHEK@0.375838,NHLF@0.0035475,SKNSHRA@0.265238, 0 0 0 0 ENSG00000223461.1 ENST00000456035.1 chr22:19109042-19112016 2 580 2392 intronic 0 0 0,1,0 0 0,0,0 0 0 0 0 45.4193143812709 0 0 45.9648829431438 0 0 0 cat,chimp,elephant,horse,human,macaque,marmoset,orangutan, antisense antisense A549@0,AG04450@0.0115535,BJ@0.008316,GM12878@0.021208,H1HESC@0,HELAS3@0.0469285,HEPG2@0.014798,HMEC@0,HSMM@0,HUVEC@0,K562@0.01703,MCF7@0,NHEK@0.004537,NHLF@0,SKNSHRA@0.0117015, 0 0 0 0 ENSG00000248786.1 ENST00000512240.1 chr22:19402955-19409368 3 3624 2785 intronic -0.46 0 0,0,0 0 0,0,0 0 0 0 0.88962472406181 0 0 1.90618101545254 0.675044883303411 10.347 0 1 chimp,human,orangutan, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0.001503,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0.008439, 0 0 0 0 ENSG00000185065.6 ENST00000431090.1 chr22:19435416-19437628 2 2095 115 exonic 5.63 0 1,1,1 1 0,0,0 0 0 54.264 6.16133651551313 0 60.14 6.38711217183771 0 66.174 0 0 chimp,elephant,human,orangutan, lincRNA processed_transcript A549@0.129306,AG04450@0.109588,BJ@0.157889,GM12878@0.36946,H1HESC@0.816793,HELAS3@0.955227,HEPG2@0.604002,HMEC@0.117157,HSMM@0.0697375,HUVEC@0.146364,K562@0.882177,MCF7@0.489387,NHEK@0.0500257,NHLF@0.0748925,SKNSHRA@0.403512, 0 0 0 0 ENSG00000225007.1 ENST00000452326.1 chr22:19654546-19655078 2 285 245 intergenic 0 0 0,0,0 0 0,0,0 0 0 24.726 0 0 65.724 0 0 71.032 0 0 chimp,human,macaque,marmoset,orangutan, lincRNA lincRNA A549@0,AG04450@0.03028,BJ@0.180896,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0.051732,HUVEC@0.394118,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000228287.1 ENST00000427252.1 chr22:19696897-19702318 2 558 4861 exonic 3.11 0 0,1,1 0 0,0,0 0 6.06480148117671 0 81.4569892473118 42.3077556058424 26.309 98.0232974910394 48.041966673524 38.604 0 0 cat,chimp,elephant,guinea_pig,horse,human,macaque,marmoset,mouse,orangutan,pig, antisense antisense A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000236540.1 ENST00000415503.1 chr22:20050503-20053600 3 505 2588 exonic -6.27 0 0,0,0 0 0,0,0 0 8.98183925811437 0 3.12475247524752 32.1580370942813 0 3.23168316831683 34.8377125193199 0 0 0 chimp,human,macaque,marmoset,orangutan,panda, antisense antisense A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000249923.1 ENST00000506039.1 chr22:20186252-20192441 4 2224 3959 intergenic 4.04 0 0,0,0 0 0,0,0 9.51438848920863 2.27835311947461 16.79 24.7711330935252 2.3975751452387 23.692 26.2841726618705 2.4046476382925 23.754 1 1 chimp,human,macaque,marmoset,orangutan, antisense antisense A549@0,AG04450@0.0071225,BJ@0,GM12878@0,H1HESC@0.0026675,HELAS3@0.0063315,HEPG2@0.0012245,HMEC@0,HSMM@0.001847,HUVEC@0.064905,K562@0.0024035,MCF7@0,NHEK@0.03763,NHLF@0.0043595,SKNSHRA@0.00204, 0 0 0 0 ENSG00000188424.4 ENST00000452697.2 chr22:20325666-20342955 8 373 16902 intergenic 0.61 0 0,0,0 0 0,1,0 0 0 0 0 0 0 22.2091152815013 3.12383149923086 0 0 1 chimp,human,macaque,orangutan, antisense antisense A549@0.117796,AG04450@0.003024,BJ@0,GM12878@0.0012255,H1HESC@0,HELAS3@0.058081,HEPG2@0.021835,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0.000611,NHEK@0,NHLF@0.002068,SKNSHRA@0, 13 5 7 5 ENSG00000188424.4 ENST00000454636.1 chr22:20326328-20350457 12 3278 20829 intergenic 51.08 0 0,0,0 0 0,1,0 0 0 0 0 0 0 56.3596705308115 0 0 0 1 chimp,human, antisense antisense A549@0.117796,AG04450@0.003024,BJ@0,GM12878@0.0012255,H1HESC@0,HELAS3@0.058081,HEPG2@0.021835,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0.000611,NHEK@0,NHLF@0.002068,SKNSHRA@0, 29 3 0 0 ENSG00000235578.1 ENST00000458154.1 chr22:20330726-20331888 2 444 716 intergenic -0.04 0 0,0,1 0 0,0,0 0 0 0 0 0 0 0 0 0 0 0 cat,chimp,elephant,horse,human,macaque,marmoset,orangutan, lincRNA lincRNA A549@0,AG04450@2.98136,BJ@0.129964,GM12878@0,H1HESC@0.326747,HELAS3@0,HEPG2@0.0095545,HMEC@0.082627,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@1.11764,SKNSHRA@0, 0 0 0 0 ENSG00000230410.1 ENST00000451267.1 chr22:20336866-20338449 2 373 1208 intergenic -5.08 0 0,0,0 0 0,0,0 0 0 0 0 0 0 0 0 0 0 0 chimp,human,macaque,orangutan, lincRNA lincRNA A549@0.002647,AG04450@0,BJ@0,GM12878@0,H1HESC@0.0030175,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0.0025095,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 26 4 16 4 ENSG00000230410.1 ENST00000429995.1 chr22:20337736-20341114 2 818 2558 intergenic 0.20 0 0,0,0 0 0,0,0 0 0 0 0 0 0 0 0 0 0 0 chimp,human,macaque,marmoset,orangutan, lincRNA lincRNA A549@0.002647,AG04450@0,BJ@0,GM12878@0,H1HESC@0.0030175,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0.0025095,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000235704.1 ENST00000426653.1 chr22:20377669-20378803 2 851 281 intergenic 0 0 0,0,1 0 0,0,1 0 0 0 110.767332549941 15.5516014234875 0 136.222091656874 30.1387900355872 0 0 0 cat,chimp,cow,dog,elephant,horse,human,macaque,marmoset,mouse,opossum,orangutan,panda,pig,rabbit, lincRNA lincRNA A549@0.046772,AG04450@0.032628,BJ@0.0671755,GM12878@0.34112,H1HESC@0.129424,HELAS3@0.0146805,HEPG2@0.331123,HMEC@0.05676,HSMM@0,HUVEC@0.085574,K562@0.149511,MCF7@0.119183,NHEK@0.084328,NHLF@0.009523,SKNSHRA@0.205818, 92 2 0 0 ENSG00000206176.5 ENST00000424812.1 chr22:20378814-20380089 5 458 809 intergenic 9.90 0 0,1,1 0 0,0,1 0 0 0 103.941048034934 35.0395550061805 99.07 162.187772925764 76.3040791100124 125.142 0 0 cat,chimp,cow,dog,elephant,guinea_pig,horse,human,macaque,marmoset,mouse,orangutan,panda,pig,rabbit,rat, lincRNA lincRNA A549@0.410605,AG04450@0.276259,BJ@0.685613,GM12878@0.43432,H1HESC@6.43607,HELAS3@0.554967,HEPG2@2.85533,HMEC@2.64025,HSMM@0.361855,HUVEC@0.531278,K562@1.10421,MCF7@1.64067,NHEK@0.940151,NHLF@0.204035,SKNSHRA@1.71054, 0 0 0 0 ENSG00000206176.5 ENST00000448747.1 chr22:20378909-20380045 6 348 778 intergenic 5.12 0 0,1,1 0 0,0,1 0 0 0 171.224137931034 11.086118251928 106.21 272.045977011494 42.3573264781491 132.367 0 0 chimp,dog,guinea_pig,horse,human,macaque,marmoset,mouse,orangutan,panda,pig,rabbit,rat, lincRNA lincRNA A549@0.410605,AG04450@0.276259,BJ@0.685613,GM12878@0.43432,H1HESC@6.43607,HELAS3@0.554967,HEPG2@2.85533,HMEC@2.64025,HSMM@0.361855,HUVEC@0.531278,K562@1.10421,MCF7@1.64067,NHEK@0.940151,NHLF@0.204035,SKNSHRA@1.71054, 0 0 0 0 ENSG00000206176.5 ENST00000412928.1 chr22:20378933-20380071 4 469 663 intergenic 7.29 0 0,1,1 0 0,0,1 0 0 0 98.7484008528785 35.1779788838612 112.33 144.880597014925 81.921568627451 139.303 0 0 chimp,dog,elephant,guinea_pig,horse,human,macaque,marmoset,orangutan,pig,rabbit, lincRNA lincRNA A549@0.410605,AG04450@0.276259,BJ@0.685613,GM12878@0.43432,H1HESC@6.43607,HELAS3@0.554967,HEPG2@2.85533,HMEC@2.64025,HSMM@0.361855,HUVEC@0.531278,K562@1.10421,MCF7@1.64067,NHEK@0.940151,NHLF@0.204035,SKNSHRA@1.71054, 0 0 0 0 ENSG00000206176.5 ENST00000436846.1 chr22:20378938-20380071 5 316 809 intergenic 9.90 0 0,1,1 0 0,0,1 0 0 0 107.879746835443 35.0395550061805 112.585 190.256329113924 76.3040791100124 139.303 0 0 cat,chimp,dog,elephant,guinea_pig,human,macaque,marmoset,mouse,orangutan,panda,pig,rabbit,rat, lincRNA lincRNA A549@0.410605,AG04450@0.276259,BJ@0.685613,GM12878@0.43432,H1HESC@6.43607,HELAS3@0.554967,HEPG2@2.85533,HMEC@2.64025,HSMM@0.361855,HUVEC@0.531278,K562@1.10421,MCF7@1.64067,NHEK@0.940151,NHLF@0.204035,SKNSHRA@1.71054, 0 0 0 0 ENSG00000206176.5 ENST00000438669.1 chr22:20379276-20380440 4 784 374 intergenic 43.30 1 0,1,1 0 0,0,1 0 0 0 69.6607142857143 62.3609625668449 40.043 130.896683673469 97.8903743315508 72.704 0 0 cat,chimp,cow,dog,elephant,guinea_pig,horse,human,macaque,marmoset,mouse,opossum,orangutan,panda,pig,rabbit,rat, lincRNA lincRNA A549@0.410605,AG04450@0.276259,BJ@0.685613,GM12878@0.43432,H1HESC@6.43607,HELAS3@0.554967,HEPG2@2.85533,HMEC@2.64025,HSMM@0.361855,HUVEC@0.531278,K562@1.10421,MCF7@1.64067,NHEK@0.940151,NHLF@0.204035,SKNSHRA@1.71054, 42 3 24 3 ENSG00000206176.5 ENST00000544204.1 chr22:20379677-20380438 4 474 281 intergenic 45.91 1 0,0,1 0 0,0,1 0 0 0 79.6497890295359 17.8790035587189 64.064 159.189873417722 36.5551601423488 101.842 0 0 cat,chimp,dog,elephant,guinea_pig,horse,human,macaque,marmoset,mouse,opossum,orangutan,panda,pig,rabbit,rat, lincRNA lincRNA A549@0.410605,AG04450@0.276259,BJ@0.685613,GM12878@0.43432,H1HESC@6.43607,HELAS3@0.554967,HEPG2@2.85533,HMEC@2.64025,HSMM@0.361855,HUVEC@0.531278,K562@1.10421,MCF7@1.64067,NHEK@0.940151,NHLF@0.204035,SKNSHRA@1.71054, 0 0 0 0 ENSG00000223579.1 ENST00000414550.1 chr22:20632132-20656828 9 1850 22830 intergenic 3.42 0 0,0,0 0 0,0,0 0 0 0 0 0 0 0 32.4243977222952 0 0 0 chimp,human,macaque,marmoset, lincRNA lincRNA A549@0.148178,AG04450@0.005535,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0.0010495,SKNSHRA@0.0012225, 17 4 11 4 ENSG00000223579.1 ENST00000428139.1 chr22:20640889-20656782 8 547 15332 intergenic 0.61 0 0,0,0 0 0,0,0 0 0 0 0 0 0 0 0 0 0 0 chimp,human,macaque, lincRNA lincRNA A549@0.148178,AG04450@0.005535,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0.0010495,SKNSHRA@0.0012225, 0 0 0 0 ENSG00000223579.1 ENST00000412656.1 chr22:20640968-20661407 9 718 19705 intergenic 0.61 0 0,0,0 0 0,0,0 0 0 0 13.1406685236769 1.91129155036793 0 265.679665738162 18.4312611012433 180.124 0 0 elephant,human,macaque,marmoset,orangutan, lincRNA lincRNA A549@0.148178,AG04450@0.005535,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0.0010495,SKNSHRA@0.0012225, 13 5 7 5 ENSG00000227005.1 ENST00000413504.1 chr22:20644408-20645991 2 373 1208 intergenic -5.08 0 0,0,0 0 0,0,0 0 0 0 0 0 0 0 0 0 0 0 chimp,human,macaque,orangutan, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0.005487,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 26 4 16 4 ENSG00000188280.6 ENST00000441723.2 chr22:20692509-20706406 7 468 13417 intronic -1.22 0 0,0,0 0 0,0,0 0 0 0 0 0 0 0 0 0 0 0 chimp,human,macaque,orangutan, antisense antisense A549@0.149816,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 13 5 7 5 ENSG00000188280.6 ENST00000434783.2 chr22:20692622-20716647 8 373 23638 intronic -1.22 0 0,0,1 0 0,0,0 0 0 0 0 0 0 22.0563002680965 20.8095016498858 0 0 1 chimp,human,macaque,orangutan, antisense antisense A549@0.149816,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000236003.1 ENST00000420225.1 chr22:20876357-20878157 3 649 1147 exonic -8.15 1 0,0,1 0 0,0,0 0 46.8918918918919 0 5.89368258859784 2.08369659982563 3.78 6.28659476117103 2.25806451612903 3.892 0 0 chimp,human,macaque,marmoset,orangutan, antisense antisense A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0.0041065,MCF7@0.010763,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000226287.3 ENST00000359859.2 chr22:21055220-21055955 1 735 0 intergenic -6.29 0 0,0,0 0 0,0,0 0 0 0 18.734693877551 0 0 19.469387755102 0 0 0 1 chimp,human,marmoset,orangutan, lincRNA retained_intron A549@0.650618,AG04450@0.352963,BJ@1.18084,GM12878@0.872127,H1HESC@8.29394,HELAS3@0.699165,HEPG2@3.54639,HMEC@4.0299,HSMM@0.740231,HUVEC@0.628763,K562@1.79638,MCF7@2.31117,NHEK@1.84924,NHLF@0.355642,SKNSHRA@1.78419, 135 2 0 0 ENSG00000226287.3 ENST00000450925.2 chr22:21055402-21058894 8 1953 1525 intergenic 32.23 1 0,0,1 0 0,0,0 0 0 0 71.9877112135177 31.975737704918 0 98.9083461341526 37.0360655737705 0 0 0 cat,chimp,horse,human,macaque,marmoset,orangutan,pig, lincRNA processed_transcript A549@0.650618,AG04450@0.352963,BJ@1.18084,GM12878@0.872127,H1HESC@8.29394,HELAS3@0.699165,HEPG2@3.54639,HMEC@4.0299,HSMM@0.740231,HUVEC@0.628763,K562@1.79638,MCF7@2.31117,NHEK@1.84924,NHLF@0.355642,SKNSHRA@1.78419, 77 2 0 0 ENSG00000226287.3 ENST00000436618.1 chr22:21056600-21058628 7 919 1097 intergenic 11.53 0 0,1,0 0 0,0,0 0 0 0 78.8182807399347 23.6244302643573 72.233 113.06528835691 28.2297174111212 66.627 0 0 cat,chimp,cow,dog,elephant,guinea_pig,horse,human,macaque,marmoset,opossum,orangutan,panda,pig,rabbit,rat, lincRNA retained_intron A549@0.650618,AG04450@0.352963,BJ@1.18084,GM12878@0.872127,H1HESC@8.29394,HELAS3@0.699165,HEPG2@3.54639,HMEC@4.0299,HSMM@0.740231,HUVEC@0.628763,K562@1.79638,MCF7@2.31117,NHEK@1.84924,NHLF@0.355642,SKNSHRA@1.78419, 0 0 0 0 ENSG00000226287.3 ENST00000442222.1 chr22:21056965-21058890 8 729 1182 intergenic 15.45 1 1,1,1 0 0,0,0 0 0 0 99.9739368998628 25.919627749577 71.959 167.753086419753 33.3324873096447 73.586 0 0 cat,chimp,cow,dog,elephant,guinea_pig,horse,human,macaque,marmoset,mouse,opossum,orangutan,panda,pig,rabbit,rat, lincRNA processed_transcript A549@0.650618,AG04450@0.352963,BJ@1.18084,GM12878@0.872127,H1HESC@8.29394,HELAS3@0.699165,HEPG2@3.54639,HMEC@4.0299,HSMM@0.740231,HUVEC@0.628763,K562@1.79638,MCF7@2.31117,NHEK@1.84924,NHLF@0.355642,SKNSHRA@1.78419, 0 0 0 0 ENSG00000226287.3 ENST00000445836.1 chr22:21057129-21058793 7 664 988 intergenic 39.68 1 0,1,0 1 0,0,0 0 0 0 121.134036144578 76.7641700404858 71.959 202.51656626506 90.1811740890688 73.586 0 0 cat,chimp,cow,dog,elephant,guinea_pig,horse,human,macaque,marmoset,mouse,opossum,orangutan,panda,pig,rabbit,rat, lincRNA processed_transcript A549@0.650618,AG04450@0.352963,BJ@1.18084,GM12878@0.872127,H1HESC@8.29394,HELAS3@0.699165,HEPG2@3.54639,HMEC@4.0299,HSMM@0.740231,HUVEC@0.628763,K562@1.79638,MCF7@2.31117,NHEK@1.84924,NHLF@0.355642,SKNSHRA@1.78419, 0 0 0 0 ENSG00000226287.3 ENST00000452055.1 chr22:21057209-21058894 6 782 893 intergenic 11.53 1 1,1,1 1 0,0,0 0 0 0 75.1828644501279 32.538633818589 88.417 140.620204603581 42.3034714445689 88.346 0 0 cat,chimp,dog,elephant,guinea_pig,horse,human,macaque,marmoset,mouse,opossum,orangutan,panda,pig,rabbit,rat, lincRNA retained_intron A549@0.650618,AG04450@0.352963,BJ@1.18084,GM12878@0.872127,H1HESC@8.29394,HELAS3@0.699165,HEPG2@3.54639,HMEC@4.0299,HSMM@0.740231,HUVEC@0.628763,K562@1.79638,MCF7@2.31117,NHEK@1.84924,NHLF@0.355642,SKNSHRA@1.78419, 42 3 24 3 ENSG00000226287.3 ENST00000414022.1 chr22:21057261-21058542 5 461 812 intergenic 9.63 0 0,1,0 1 0,0,0 0 0 0 112.566160520607 33.8411330049261 88.417 187.27114967462 42.7352216748768 88.346 0 0 cat,chimp,dog,elephant,guinea_pig,horse,human,macaque,marmoset,mouse,orangutan,panda,pig,rabbit, lincRNA retained_intron A549@0.650618,AG04450@0.352963,BJ@1.18084,GM12878@0.872127,H1HESC@8.29394,HELAS3@0.699165,HEPG2@3.54639,HMEC@4.0299,HSMM@0.740231,HUVEC@0.628763,K562@1.79638,MCF7@2.31117,NHEK@1.84924,NHLF@0.355642,SKNSHRA@1.78419, 0 0 0 0 ENSG00000226287.3 ENST00000454833.1 chr22:21057263-21058407 3 416 724 intergenic 0 0 0,1,0 1 0,0,0 0 0 0 116.242788461538 44.1933701657459 88.417 241.673076923077 53.0013812154696 88.346 0 0 chimp,dog,elephant,guinea_pig,horse,human,macaque,marmoset,mouse,orangutan,panda,pig,rabbit, lincRNA retained_intron A549@0.650618,AG04450@0.352963,BJ@1.18084,GM12878@0.872127,H1HESC@8.29394,HELAS3@0.699165,HEPG2@3.54639,HMEC@4.0299,HSMM@0.740231,HUVEC@0.628763,K562@1.79638,MCF7@2.31117,NHEK@1.84924,NHLF@0.355642,SKNSHRA@1.78419, 0 0 0 0 ENSG00000226287.3 ENST00000419950.1 chr22:21057340-21058894 7 656 886 intergenic 25.94 1 1,1,1 1 0,0,0 0 0 0 110.411585365854 12.9176072234763 91.288 187.605182926829 22.5620767494357 91.595 0 0 cat,chimp,cow,dog,elephant,guinea_pig,horse,human,macaque,marmoset,mouse,opossum,orangutan,panda,pig,rabbit,rat, lincRNA processed_transcript A549@0.650618,AG04450@0.352963,BJ@1.18084,GM12878@0.872127,H1HESC@8.29394,HELAS3@0.699165,HEPG2@3.54639,HMEC@4.0299,HSMM@0.740231,HUVEC@0.628763,K562@1.79638,MCF7@2.31117,NHEK@1.84924,NHLF@0.355642,SKNSHRA@1.78419, 0 0 0 0 ENSG00000226287.3 ENST00000422715.1 chr22:21057383-21058522 4 467 666 intergenic 7.02 0 0,0,0 1 0,0,0 0 0 0 106.394004282655 31.5780780780781 97.475 284.089935760171 37.3153153153153 99.442 0 0 chimp,dog,elephant,guinea_pig,horse,human,macaque,marmoset,orangutan,pig,rabbit, lincRNA retained_intron A549@0.650618,AG04450@0.352963,BJ@1.18084,GM12878@0.872127,H1HESC@8.29394,HELAS3@0.699165,HEPG2@3.54639,HMEC@4.0299,HSMM@0.740231,HUVEC@0.628763,K562@1.79638,MCF7@2.31117,NHEK@1.84924,NHLF@0.355642,SKNSHRA@1.78419, 0 0 0 0 ENSG00000226287.3 ENST00000428752.1 chr22:21058004-21058846 3 611 227 intergenic 13.75 1 0,0,1 0 0,0,0 0 0 0 67.1145662847791 35.3568281938326 56.129 113.808510638298 56.9383259911894 63.708 0 0 cat,chimp,cow,dog,elephant,guinea_pig,horse,human,macaque,marmoset,mouse,opossum,orangutan,panda,pig,rabbit,rat, lincRNA retained_intron A549@0.650618,AG04450@0.352963,BJ@1.18084,GM12878@0.872127,H1HESC@8.29394,HELAS3@0.699165,HEPG2@3.54639,HMEC@4.0299,HSMM@0.740231,HUVEC@0.628763,K562@1.79638,MCF7@2.31117,NHEK@1.84924,NHLF@0.355642,SKNSHRA@1.78419, 0 0 0 0 ENSG00000234252.1 ENST00000430719.1 chr22:21077335-21080208 2 2398 473 exonic 2.67 0 0,0,1 0 0,0,0 0 0 0 0 0 0 0 0 0 0 0 chimp,human,macaque,orangutan, lincRNA processed_transcript A549@0,AG04450@0,BJ@0,GM12878@0.0019535,H1HESC@0,HELAS3@0.0034785,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0.002231,MCF7@0.003427,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000237476.1 ENST00000444039.1 chr22:21311380-21318967 2 682 6903 intergenic 6.33 0 1,1,1 0 0,0,0 0 0 0 0 0.491960017383746 0 10.2258064516129 0.493698392003477 0 0 0 cat,chimp,elephant,human,macaque,marmoset,orangutan, lincRNA lincRNA A549@0.345442,AG04450@0.285531,BJ@0.312084,GM12878@0.009801,H1HESC@0.131432,HELAS3@0.134254,HEPG2@0.631124,HMEC@0.023945,HSMM@0.025363,HUVEC@0.0545435,K562@0.0265155,MCF7@0.461504,NHEK@0.198494,NHLF@0.102061,SKNSHRA@0.0078645, 0 0 0 0 ENSG00000230513.1 ENST00000436079.1 chr22:21356175-21364414 2 1718 6519 exonic 7.31 0 0,1,0 0 0,0,0 37.4639115250291 2.15217057830956 100.519 58.5372526193248 56.899984660224 141.944 67.3271245634459 76.310937260316 143.642 0 0 chimp,human,macaque,orangutan, antisense antisense A549@0.124204,AG04450@0.185157,BJ@0.181185,GM12878@0.200319,H1HESC@0.7184,HELAS3@0.478061,HEPG2@0.31212,HMEC@0.45831,HSMM@0.309429,HUVEC@0.294708,K562@0.239982,MCF7@0.482042,NHEK@0.28738,NHLF@0.245017,SKNSHRA@0.892726, 0 0 0 0 ENSG00000230513.1 ENST00000429962.1 chr22:21356211-21357561 2 1261 87 exonic 9.36 0 1,1,1 0 0,0,0 19.2188739095956 0 114.523 117.210150674068 102.310344827586 164.048 126.511498810468 120.287356321839 162.645 0 0 chimp,human,orangutan, antisense antisense A549@0.124204,AG04450@0.185157,BJ@0.181185,GM12878@0.200319,H1HESC@0.7184,HELAS3@0.478061,HEPG2@0.31212,HMEC@0.45831,HSMM@0.309429,HUVEC@0.294708,K562@0.239982,MCF7@0.482042,NHEK@0.28738,NHLF@0.245017,SKNSHRA@0.892726, 0 0 0 0 ENSG00000230513.1 ENST00000452284.1 chr22:21356497-21364631 2 2296 5836 intergenic 13.95 0 1,1,1 1 0,0,0 17.4886759581882 0 139.147 128.867595818815 22.5962988348184 186.767 186.238240418118 25.4931459904044 181.668 0 0 chimp,human,macaque,orangutan, antisense antisense A549@0.124204,AG04450@0.185157,BJ@0.181185,GM12878@0.200319,H1HESC@0.7184,HELAS3@0.478061,HEPG2@0.31212,HMEC@0.45831,HSMM@0.309429,HUVEC@0.294708,K562@0.239982,MCF7@0.482042,NHEK@0.28738,NHLF@0.245017,SKNSHRA@0.892726, 0 0 0 0 ENSG00000226872.1 ENST00000450652.1 chr22:21385646-21398258 3 560 12048 exonic 4.13 0 0,1,1 0 0,0,0 27.7303571428571 1.72667662682603 32.639 80.9625 6.92737383798141 135.359 108.921428571429 17.4125996015936 199.416 0 0 chimp,guinea_pig,horse,human,macaque,marmoset,mouse,orangutan, antisense antisense A549@0.009812,AG04450@0.0215025,BJ@0.0042985,GM12878@0,H1HESC@0,HELAS3@0.0482025,HEPG2@0,HMEC@0,HSMM@0.0830135,HUVEC@0,K562@0.009511,MCF7@0.007304,NHEK@0.0157457,NHLF@0,SKNSHRA@0.0518115, 0 0 0 0 ENSG00000197210.6 ENST00000457627.2 chr22:21470111-21473751 4 1559 2075 intergenic 9.33 0 0,0,0 0 0,0,0 0 0 0 59.7748556767158 0 30.634 255.77293136626 47.5098795180723 86.716 0 0 cat,chimp,dog,elephant,horse,human,macaque,marmoset,orangutan,panda,rabbit,rat, processed_transcript processed_transcript A549@0.050795,AG04450@0.0407355,BJ@0.0605585,GM12878@0.0016485,H1HESC@0.013153,HELAS3@0.00187,HEPG2@0.006068,HMEC@0.002542,HSMM@0.027534,HUVEC@0.0021695,K562@0.000508,MCF7@0.011681,NHEK@0,NHLF@0.0145255,SKNSHRA@0.0365575, 0 0 0 0 ENSG00000215498.3 ENST00000451257.1 chr22:21522047-21546445 12 3554 20822 intergenic 53.12 0 0,0,1 0 0,0,0 0 0 0 0 0 0 98.8398987056837 0.268418019402555 0 0 0 chimp,human, antisense antisense A549@0.312578,AG04450@0.004057,BJ@0.0010035,GM12878@0.0024605,H1HESC@0.0011635,HELAS3@0.0042445,HEPG2@0.0068845,HMEC@0,HSMM@0.014111,HUVEC@0,K562@0.046723,MCF7@0.0015785,NHEK@0.051533,NHLF@0.0013605,SKNSHRA@0.0027205, 0 0 0 0 ENSG00000215498.3 ENST00000415376.1 chr22:21522118-21546438 9 1850 22454 intergenic 3.36 0 0,0,1 0 0,0,0 0 0 0 0 0 0 125.571891891892 15.1140108666607 0 0 0 chimp,cow,human,macaque,marmoset, antisense antisense A549@0.312578,AG04450@0.004057,BJ@0.0010035,GM12878@0.0024605,H1HESC@0.0011635,HELAS3@0.0042445,HEPG2@0.0068845,HMEC@0,HSMM@0.014111,HUVEC@0,K562@0.046723,MCF7@0.0015785,NHEK@0.051533,NHLF@0.0013605,SKNSHRA@0.0027205, 17 4 11 4 ENSG00000215498.3 ENST00000420583.1 chr22:21522142-21525141 3 553 2442 intergenic -10.76 0 0,0,0 0 0,0,0 0 0 0 0 0 0 0 0 0 0 0 chimp,elephant,horse,human,macaque,marmoset,orangutan, antisense retained_intron A549@0.312578,AG04450@0.004057,BJ@0.0010035,GM12878@0.0024605,H1HESC@0.0011635,HELAS3@0.0042445,HEPG2@0.0068845,HMEC@0,HSMM@0.014111,HUVEC@0,K562@0.046723,MCF7@0.0015785,NHEK@0.051533,NHLF@0.0013605,SKNSHRA@0.0027205, 0 0 88 2 ENSG00000215498.3 ENST00000415704.1 chr22:21522142-21527819 4 392 5279 intergenic 0 0 0,0,0 0 0,0,0 0 0 0 0 0 0 0 0 0 0 1 chimp,human,macaque,orangutan, antisense retained_intron A549@0.312578,AG04450@0.004057,BJ@0.0010035,GM12878@0.0024605,H1HESC@0.0011635,HELAS3@0.0042445,HEPG2@0.0068845,HMEC@0,HSMM@0.014111,HUVEC@0,K562@0.046723,MCF7@0.0015785,NHEK@0.051533,NHLF@0.0013605,SKNSHRA@0.0027205, 0 0 0 0 ENSG00000215498.3 ENST00000421576.1 chr22:21522174-21537611 9 589 14832 intergenic 0.38 0 0,0,1 0 0,0,0 0 0 0 0 0 0 10.7079796264856 0 0 0 0 chimp,human,macaque,orangutan, antisense antisense A549@0.312578,AG04450@0.004057,BJ@0.0010035,GM12878@0.0024605,H1HESC@0.0011635,HELAS3@0.0042445,HEPG2@0.0068845,HMEC@0,HSMM@0.014111,HUVEC@0,K562@0.046723,MCF7@0.0015785,NHEK@0.051533,NHLF@0.0013605,SKNSHRA@0.0027205, 13 5 7 5 ENSG00000215498.3 ENST00000446717.1 chr22:21524102-21535345 6 460 10773 intergenic 0.65 0 0,1,0 0 0,0,0 0 0 0 0 0 0 0 0 0 0 1 chimp,human,macaque,orangutan, antisense retained_intron A549@0.312578,AG04450@0.004057,BJ@0.0010035,GM12878@0.0024605,H1HESC@0.0011635,HELAS3@0.0042445,HEPG2@0.0068845,HMEC@0,HSMM@0.014111,HUVEC@0,K562@0.046723,MCF7@0.0015785,NHEK@0.051533,NHLF@0.0013605,SKNSHRA@0.0027205, 0 0 0 0 ENSG00000215498.3 ENST00000430463.1 chr22:21524154-21524944 2 321 467 intergenic 0.65 0 0,1,0 0 0,0,0 0 0 0 0 0 0 0 0 0 0 0 cat,chimp,elephant,horse,human,macaque,marmoset,orangutan,panda, antisense antisense A549@0.312578,AG04450@0.004057,BJ@0.0010035,GM12878@0.0024605,H1HESC@0.0011635,HELAS3@0.0042445,HEPG2@0.0068845,HMEC@0,HSMM@0.014111,HUVEC@0,K562@0.046723,MCF7@0.0015785,NHEK@0.051533,NHLF@0.0013605,SKNSHRA@0.0027205, 0 0 0 0 ENSG00000215498.3 ENST00000424410.1 chr22:21524235-21537263 7 1849 11167 intergenic 0.61 0 0,0,0 0 0,0,0 0 0 0 0 0 0 0 0 0 0 0 chimp,human,macaque,orangutan, antisense antisense A549@0.312578,AG04450@0.004057,BJ@0.0010035,GM12878@0.0024605,H1HESC@0.0011635,HELAS3@0.0042445,HEPG2@0.0068845,HMEC@0,HSMM@0.014111,HUVEC@0,K562@0.046723,MCF7@0.0015785,NHEK@0.051533,NHLF@0.0013605,SKNSHRA@0.0027205, 0 0 0 0 ENSG00000234503.1 ENST00000417463.1 chr22:21532181-21534164 2 772 1209 intergenic -4.84 0 0,0,0 0 0,0,0 0 0 0 0 0 0 0 0 0 0 0 chimp,human,macaque,orangutan, lincRNA lincRNA A549@0.026144,AG04450@0.321037,BJ@0.0283015,GM12878@0,H1HESC@0.222335,HELAS3@0,HEPG2@0.0111275,HMEC@0,HSMM@0.0026585,HUVEC@0,K562@0,MCF7@0,NHEK@0.006823,NHLF@0.0378135,SKNSHRA@0.008809, 26 4 16 4 ENSG00000215498.3 ENST00000433014.1 chr22:21537203-21546444 4 3817 5418 intergenic 53.12 0 0,0,1 0 0,0,0 0 0 0 0 0 0 148.307309405292 1.03156146179402 0 0 0 chimp,human, antisense TEC A549@0.312578,AG04450@0.004057,BJ@0.0010035,GM12878@0.0024605,H1HESC@0.0011635,HELAS3@0.0042445,HEPG2@0.0068845,HMEC@0,HSMM@0.014111,HUVEC@0,K562@0.046723,MCF7@0.0015785,NHEK@0.051533,NHLF@0.0013605,SKNSHRA@0.0027205, 29 3 36 2 ENSG00000206142.4 ENST00000447720.1 chr22:21655279-21679331 12 3203 20827 intergenic 53.87 0 0,0,0 0 0,0,0 0 0 0 0 0 0 102.292850452701 1.27694819225044 0 0 0 chimp,human, lincRNA lincRNA A549@0.446591,AG04450@0.009646,BJ@0,GM12878@0.005458,H1HESC@0,HELAS3@0.04953,HEPG2@0.003976,HMEC@0,HSMM@0.0141035,HUVEC@0,K562@0.0456775,MCF7@0.0086625,NHEK@0.0497437,NHLF@0,SKNSHRA@0.008737, 0 0 0 0 ENSG00000206142.4 ENST00000436681.1 chr22:21655280-21664170 3 3711 5175 intergenic 53.87 0 0,0,0 0 0,0,0 0 0 0 0 0 0 93.7871193748316 1.19710144927536 0 0 0 chimp,human, lincRNA lincRNA A549@0.446591,AG04450@0.009646,BJ@0,GM12878@0.005458,H1HESC@0,HELAS3@0.04953,HEPG2@0.003976,HMEC@0,HSMM@0.0141035,HUVEC@0,K562@0.0456775,MCF7@0.0086625,NHEK@0.0497437,NHLF@0,SKNSHRA@0.008737, 29 3 36 2 ENSG00000206142.4 ENST00000455288.2 chr22:21655286-21677166 9 1728 20136 intergenic 2.68 0 0,0,1 0 0,0,0 0 0 0 0 0 0 0 17.6069725864124 0 0 0 chimp,cow,human,macaque,marmoset,orangutan, lincRNA lincRNA A549@0.446591,AG04450@0.009646,BJ@0,GM12878@0.005458,H1HESC@0,HELAS3@0.04953,HEPG2@0.003976,HMEC@0,HSMM@0.0141035,HUVEC@0,K562@0.0456775,MCF7@0.0086625,NHEK@0.0497437,NHLF@0,SKNSHRA@0.008737, 0 0 0 0 ENSG00000206142.4 ENST00000416615.1 chr22:21655286-21679331 9 1921 22108 intergenic 2.68 0 0,0,1 0 0,0,0 0 0 0 0 0 0 0 16.0364573909897 0 0 0 chimp,human,macaque,marmoset, lincRNA lincRNA A549@0.446591,AG04450@0.009646,BJ@0,GM12878@0.005458,H1HESC@0,HELAS3@0.04953,HEPG2@0.003976,HMEC@0,HSMM@0.0141035,HUVEC@0,K562@0.0456775,MCF7@0.0086625,NHEK@0.0497437,NHLF@0,SKNSHRA@0.008737, 17 4 11 4 ENSG00000206142.4 ENST00000440315.2 chr22:21663055-21663732 2 649 26 intergenic 0 0 0,0,0 0 0,0,0 0 0 0 0 0 0 138.679506933744 109.576923076923 44.46 0 0 cat,chimp,cow,dog,elephant,guinea_pig,horse,human,macaque,marmoset,mouse,opossum,orangutan,pig,rabbit,rat, lincRNA lincRNA A549@0.446591,AG04450@0.009646,BJ@0,GM12878@0.005458,H1HESC@0,HELAS3@0.04953,HEPG2@0.003976,HMEC@0,HSMM@0.0141035,HUVEC@0,K562@0.0456775,MCF7@0.0086625,NHEK@0.0497437,NHLF@0,SKNSHRA@0.008737, 0 0 0 0 ENSG00000206142.4 ENST00000416405.1 chr22:21664110-21677143 7 1850 11171 intergenic 0.61 0 0,1,0 0 0,0,0 0 0 0 0 0 0 0 0 0 0 0 chimp,human,macaque,orangutan, lincRNA lincRNA A549@0.446591,AG04450@0.009646,BJ@0,GM12878@0.005458,H1HESC@0,HELAS3@0.04953,HEPG2@0.003976,HMEC@0,HSMM@0.0141035,HUVEC@0,K562@0.0456775,MCF7@0.0086625,NHEK@0.0497437,NHLF@0,SKNSHRA@0.008737, 0 0 0 0 ENSG00000206142.4 ENST00000453273.1 chr22:21666029-21679226 7 563 12622 intergenic 0.65 0 0,0,0 0 0,0,0 0 0 0 0 0 0 0 0 0 0 0 chimp,human,macaque,orangutan, lincRNA lincRNA A549@0.446591,AG04450@0.009646,BJ@0,GM12878@0.005458,H1HESC@0,HELAS3@0.04953,HEPG2@0.003976,HMEC@0,HSMM@0.0141035,HUVEC@0,K562@0.0456775,MCF7@0.0086625,NHEK@0.0497437,NHLF@0,SKNSHRA@0.008737, 0 0 0 0 ENSG00000206142.4 ENST00000431488.1 chr22:21666029-21679331 8 665 12623 intergenic 0.22 0 0,0,0 0 0,0,0 0 0 0 0 0 0 0 0 0 0 0 chimp,human,macaque, lincRNA lincRNA A549@0.446591,AG04450@0.009646,BJ@0,GM12878@0.005458,H1HESC@0,HELAS3@0.04953,HEPG2@0.003976,HMEC@0,HSMM@0.0141035,HUVEC@0,K562@0.0456775,MCF7@0.0086625,NHEK@0.0497437,NHLF@0,SKNSHRA@0.008737, 13 5 7 5 ENSG00000237407.1 ENST00000434730.1 chr22:21667209-21669193 2 773 1209 intergenic -5.46 0 0,0,1 0 0,0,0 0 0 0 0 0 0 0 0 0 0 0 chimp,human,macaque,orangutan, lincRNA lincRNA A549@0,AG04450@0.049104,BJ@0.0095305,GM12878@0,H1HESC@0.0929775,HELAS3@0,HEPG2@0.005615,HMEC@0,HSMM@0.002655,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0.030212,SKNSHRA@0.0117305, 26 4 16 4 ENSG00000206142.4 ENST00000451574.1 chr22:21673559-21679256 4 412 5279 intergenic 0 0 0,0,0 0 0,0,0 0 0 0 0 0 0 0 0 0 0 0 chimp,human,macaque, lincRNA lincRNA A549@0.446591,AG04450@0.009646,BJ@0,GM12878@0.005458,H1HESC@0,HELAS3@0.04953,HEPG2@0.003976,HMEC@0,HSMM@0.0141035,HUVEC@0,K562@0.0456775,MCF7@0.0086625,NHEK@0.0497437,NHLF@0,SKNSHRA@0.008737, 0 0 0 0 ENSG00000206142.4 ENST00000452952.1 chr22:21676237-21679256 3 573 2442 intergenic -10.76 0 0,0,0 0 0,0,0 0 0 0 0 0 0 0 0 0 0 0 chimp,elephant,human,macaque,marmoset,orangutan, lincRNA lincRNA A549@0.446591,AG04450@0.009646,BJ@0,GM12878@0.005458,H1HESC@0,HELAS3@0.04953,HEPG2@0.003976,HMEC@0,HSMM@0.0141035,HUVEC@0,K562@0.0456775,MCF7@0.0086625,NHEK@0.0497437,NHLF@0,SKNSHRA@0.008737, 0 0 88 2 ENSG00000206142.4 ENST00000411581.1 chr22:21676430-21677224 2 325 467 intergenic 0.65 0 0,0,0 0 0,0,0 0 0 0 0 0 0 0 0 0 0 0 cat,chimp,elephant,horse,human,macaque,marmoset,orangutan,panda, lincRNA lincRNA A549@0.446591,AG04450@0.009646,BJ@0,GM12878@0.005458,H1HESC@0,HELAS3@0.04953,HEPG2@0.003976,HMEC@0,HSMM@0.0141035,HUVEC@0,K562@0.0456775,MCF7@0.0086625,NHEK@0.0497437,NHLF@0,SKNSHRA@0.008737, 0 0 0 0 ENSG00000206140.5 ENST00000456303.1 chr22:21820712-21824224 8 1950 1548 intergenic 59.53 0 0,0,1 0 0,0,1 0 0 0 143.631282051282 42.4276485788114 0 104.55641025641 41.6259689922481 0 0 0 cat,chimp,horse,human,macaque,marmoset,orangutan,pig, lincRNA processed_transcript A549@0.47421,AG04450@0.411837,BJ@1.27501,GM12878@1.13001,H1HESC@4.18918,HELAS3@0.680297,HEPG2@3.91755,HMEC@1.74443,HSMM@0.36124,HUVEC@0.593894,K562@2.09362,MCF7@2.70477,NHEK@0.997792,NHLF@0.72002,SKNSHRA@2.37209, 77 2 0 0 ENSG00000206140.5 ENST00000545656.1 chr22:21820783-21821265 1 482 0 intergenic -6.60 0 0,0,0 0 0,0,0 0 0 0 0 0 0 0 0 0 1 1 chimp,human,macaque,marmoset,orangutan, lincRNA processed_transcript A549@0.47421,AG04450@0.411837,BJ@1.27501,GM12878@1.13001,H1HESC@4.18918,HELAS3@0.680297,HEPG2@3.91755,HMEC@1.74443,HSMM@0.36124,HUVEC@0.593894,K562@2.09362,MCF7@2.70477,NHEK@0.997792,NHLF@0.72002,SKNSHRA@2.37209, 135 2 0 0 ENSG00000206140.5 ENST00000415764.1 chr22:21821551-21824222 5 1786 877 intergenic 41.10 0 0,0,1 0 0,0,1 0 0 0 140.188129899216 13.4948688711517 0 133.320828667413 13.806157354618 0 0 0 cat,chimp,cow,dog,elephant,horse,human,macaque,marmoset,opossum,orangutan,panda,pig,rabbit, lincRNA processed_transcript A549@0.47421,AG04450@0.411837,BJ@1.27501,GM12878@1.13001,H1HESC@4.18918,HELAS3@0.680297,HEPG2@3.91755,HMEC@1.74443,HSMM@0.36124,HUVEC@0.593894,K562@2.09362,MCF7@2.70477,NHEK@0.997792,NHLF@0.72002,SKNSHRA@2.37209, 92 2 0 0 ENSG00000206140.5 ENST00000449424.1 chr22:21821680-21825558 8 2585 1279 intergenic 44.96 0 0,1,1 0 0,0,1 0 0 0 87.699419729207 26.835027365129 0 90.4607350096712 26.721657544957 0 0 0 chimp,human,macaque,marmoset,orangutan, lincRNA processed_transcript A549@0.47421,AG04450@0.411837,BJ@1.27501,GM12878@1.13001,H1HESC@4.18918,HELAS3@0.680297,HEPG2@3.91755,HMEC@1.74443,HSMM@0.36124,HUVEC@0.593894,K562@2.09362,MCF7@2.70477,NHEK@0.997792,NHLF@0.72002,SKNSHRA@2.37209, 0 0 0 0 ENSG00000206140.5 ENST00000456153.1 chr22:21821681-21824222 7 1515 1014 intergenic 44.96 0 0,1,1 0 0,0,1 0 0 0 152.764356435644 30.112426035503 0 157.439603960396 30.0128205128205 0 0 0 cat,chimp,cow,dog,elephant,guinea_pig,horse,human,macaque,marmoset,opossum,orangutan,panda,pig,rabbit, lincRNA processed_transcript A549@0.47421,AG04450@0.411837,BJ@1.27501,GM12878@1.13001,H1HESC@4.18918,HELAS3@0.680297,HEPG2@3.91755,HMEC@1.74443,HSMM@0.36124,HUVEC@0.593894,K562@2.09362,MCF7@2.70477,NHEK@0.997792,NHLF@0.72002,SKNSHRA@2.37209, 0 0 0 0 ENSG00000206140.5 ENST00000453397.1 chr22:21821754-21824214 10 1012 1430 intergenic 41.67 0 0,1,1 0 0,0,1 0 0 0 306.27371541502 18.8545454545455 4.224 232.286561264822 20.3538461538462 2.63 0 0 cat,chimp,cow,dog,elephant,guinea_pig,horse,human,macaque,marmoset,mouse,opossum,orangutan,panda,pig,platypus,rabbit,rat, lincRNA processed_transcript A549@0.47421,AG04450@0.411837,BJ@1.27501,GM12878@1.13001,H1HESC@4.18918,HELAS3@0.680297,HEPG2@3.91755,HMEC@1.74443,HSMM@0.36124,HUVEC@0.593894,K562@2.09362,MCF7@2.70477,NHEK@0.997792,NHLF@0.72002,SKNSHRA@2.37209, 42 3 24 3 ENSG00000206140.5 ENST00000413877.1 chr22:21821909-21823556 5 766 873 intergenic -3.15 0 0,1,0 0 0,0,1 0 0 0 100.369451697128 31.4581901489118 86.064 106.595300261097 32.2634593356243 84.16 0 0 cat,chimp,cow,dog,elephant,guinea_pig,horse,human,macaque,marmoset,mouse,opossum,orangutan,panda,pig,rabbit,rat, lincRNA processed_transcript A549@0.47421,AG04450@0.411837,BJ@1.27501,GM12878@1.13001,H1HESC@4.18918,HELAS3@0.680297,HEPG2@3.91755,HMEC@1.74443,HSMM@0.36124,HUVEC@0.593894,K562@2.09362,MCF7@2.70477,NHEK@0.997792,NHLF@0.72002,SKNSHRA@2.37209, 0 0 0 0 ENSG00000206140.5 ENST00000432134.1 chr22:21822205-21823461 6 385 861 intergenic -3.15 0 0,1,0 0 0,0,1 0 0 0 241.283116883117 9.84320557491289 86.064 233.605194805195 14.0290360046458 89.362 0 0 cat,chimp,cow,dog,elephant,guinea_pig,horse,human,macaque,marmoset,mouse,opossum,orangutan,panda,pig,platypus,rabbit,rat, lincRNA processed_transcript A549@0.47421,AG04450@0.411837,BJ@1.27501,GM12878@1.13001,H1HESC@4.18918,HELAS3@0.680297,HEPG2@3.91755,HMEC@1.74443,HSMM@0.36124,HUVEC@0.593894,K562@2.09362,MCF7@2.70477,NHEK@0.997792,NHLF@0.72002,SKNSHRA@2.37209, 0 0 0 0 ENSG00000206140.5 ENST00000417708.1 chr22:21822387-21824214 8 755 1058 intergenic 20.95 0 0,1,1 0 0,0,1 0 0 0 288.748344370861 22.8761814744801 100.097 185.026490066225 24.2844990548204 102.714 0 0 cat,chimp,cow,dog,elephant,guinea_pig,horse,human,macaque,marmoset,mouse,opossum,orangutan,panda,pig,rabbit,rat, lincRNA processed_transcript A549@0.47421,AG04450@0.411837,BJ@1.27501,GM12878@1.13001,H1HESC@4.18918,HELAS3@0.680297,HEPG2@3.91755,HMEC@1.74443,HSMM@0.36124,HUVEC@0.593894,K562@2.09362,MCF7@2.70477,NHEK@0.997792,NHLF@0.72002,SKNSHRA@2.37209, 0 0 0 0 ENSG00000206140.5 ENST00000427147.1 chr22:21822577-21824208 5 879 744 intergenic 42.36 0 1,1,1 1 0,0,1 0 0 0 129.978384527873 31.6572580645161 124.818 192.747440273038 34.9489247311828 124.151 0 0 cat,chimp,cow,dog,elephant,guinea_pig,horse,human,macaque,marmoset,mouse,opossum,orangutan,panda,pig,rabbit,rat, lincRNA processed_transcript A549@0.47421,AG04450@0.411837,BJ@1.27501,GM12878@1.13001,H1HESC@4.18918,HELAS3@0.680297,HEPG2@3.91755,HMEC@1.74443,HSMM@0.36124,HUVEC@0.593894,K562@2.09362,MCF7@2.70477,NHEK@0.997792,NHLF@0.72002,SKNSHRA@2.37209, 0 0 0 0 ENSG00000206140.5 ENST00000425458.1 chr22:21823036-21824224 4 784 398 intergenic 42.36 0 0,1,1 0 0,0,1 0 0 0 125.8125 52.2889447236181 57.692 201.383928571429 51.3291457286432 57.763 0 0 cat,chimp,cow,dog,elephant,guinea_pig,horse,human,macaque,marmoset,mouse,opossum,orangutan,panda,pig,rabbit,rat, lincRNA processed_transcript A549@0.47421,AG04450@0.411837,BJ@1.27501,GM12878@1.13001,H1HESC@4.18918,HELAS3@0.680297,HEPG2@3.91755,HMEC@1.74443,HSMM@0.36124,HUVEC@0.593894,K562@2.09362,MCF7@2.70477,NHEK@0.997792,NHLF@0.72002,SKNSHRA@2.37209, 0 0 0 0 ENSG00000206140.5 ENST00000446867.1 chr22:21823045-21824006 4 492 463 intergenic 9.90 0 0,1,1 0 0,0,1 0 0 0 146.014227642276 56.0885529157667 57.692 189.176829268293 46.645788336933 58.492 0 0 cat,chimp,dog,elephant,guinea_pig,horse,human,macaque,marmoset,opossum,orangutan,panda,pig,rabbit,rat, lincRNA processed_transcript A549@0.47421,AG04450@0.411837,BJ@1.27501,GM12878@1.13001,H1HESC@4.18918,HELAS3@0.680297,HEPG2@3.91755,HMEC@1.74443,HSMM@0.36124,HUVEC@0.593894,K562@2.09362,MCF7@2.70477,NHEK@0.997792,NHLF@0.72002,SKNSHRA@2.37209, 0 0 0 0 ENSG00000206140.5 ENST00000536718.1 chr22:21823437-21825558 4 1810 305 intergenic 44.96 0 0,0,1 0 0,0,1 0 0 0 39.6342541436464 32 80.591 43.7265193370166 21.1213114754098 81.208 0 1 human,macaque,marmoset,orangutan, lincRNA processed_transcript A549@0.47421,AG04450@0.411837,BJ@1.27501,GM12878@1.13001,H1HESC@4.18918,HELAS3@0.680297,HEPG2@3.91755,HMEC@1.74443,HSMM@0.36124,HUVEC@0.593894,K562@2.09362,MCF7@2.70477,NHEK@0.997792,NHLF@0.72002,SKNSHRA@2.37209, 0 0 0 0 ENSG00000224086.3 ENST00000538634.1 chr22:22292609-22294263 1 1654 0 exonic 1.79 0 1,1,1 1 0,0,0 0 0 0 9.03204353083434 0 3.14 14.5326481257557 0 3.17 1 1 chimp,human,macaque,marmoset,orangutan, antisense antisense A549@0.223424,AG04450@0.225465,BJ@0.665446,GM12878@0.113838,H1HESC@0.215155,HELAS3@0.119333,HEPG2@0.0796,HMEC@0.154314,HSMM@0.362469,HUVEC@0.121125,K562@0.632458,MCF7@0.251875,NHEK@0.094332,NHLF@1.07393,SKNSHRA@0.131281, 0 0 0 0 ENSG00000224086.3 ENST00000458178.1 chr22:22292665-22297799 2 3645 1487 exonic 2.26 0 1,1,1 1 0,0,0 0 0 0 4.80192043895748 3.23537323470074 3.14 6.319890260631 6.99731002017485 3.17 0 0 chimp,human,macaque,orangutan, antisense antisense A549@0.223424,AG04450@0.225465,BJ@0.665446,GM12878@0.113838,H1HESC@0.215155,HELAS3@0.119333,HEPG2@0.0796,HMEC@0.154314,HSMM@0.362469,HUVEC@0.121125,K562@0.632458,MCF7@0.251875,NHEK@0.094332,NHLF@1.07393,SKNSHRA@0.131281, 0 0 0 0 ENSG00000197549.4 ENST00000419303.1 chr22:22345496-22398256 5 1864 50888 intergenic 73.66 0 1,1,1 0 0,0,0 13.9924892703863 0.585049520515642 0 37.8937768240343 0.483787926426662 0 85.0252145922747 2.74990174500865 0 0 0 chimp,cow,elephant,horse,human,macaque,orangutan,rabbit, lincRNA lincRNA A549@0,AG04450@0.0009745,BJ@0,GM12878@0.613905,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0.0012425,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000197549.4 ENST00000337471.4 chr22:22345497-22398332 7 3031 49792 intergenic 73.66 1 1,1,1 0 0,0,0 8.60508083140878 0.597927377892031 0 23.9584295612009 0.454591098971722 0 54.0122071923458 2.70551494215938 0 0 0 chimp,horse,human, lincRNA lincRNA A549@0,AG04450@0.0009745,BJ@0,GM12878@0.613905,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0.0012425,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000225070.1 ENST00000411554.1 chr22:22390743-22394463 2 777 2941 intergenic -3.01 0 0,0,0 0 0,0,0 0 0 0 0 0 0 0 5.71778306698402 0 0 0 chimp,human,orangutan, processed_transcript processed_transcript A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000234630.1 ENST00000412149.1 chr22:22648098-22649159 2 522 537 intergenic 3.69 0 0,0,0 0 0,0,0 0 0 0 0 0 0 0 0 0 0 0 chimp,human,macaque,orangutan, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000223999.1 ENST00000438185.1 chr22:23035263-23035797 2 449 83 intergenic 1.43 0 0,0,0 0 0,0,0 0 0 0 0 0 0 0 0 0 0 0 cat,chimp,dog,guinea_pig,horse,human,macaque,marmoset,orangutan,panda,pig,rabbit, lincRNA lincRNA A549@0.160514,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000240269.2 ENST00000440387.2 chr22:23154489-23235997 2 322 81184 exonic 0 0 0,0,0 0 0,0,0 0 0 0 4.79813664596273 1.12034391013007 2.781 107.947204968944 6.14897024044146 2.961 0 0 cat,chimp,cow,dog,elephant,guinea_pig,horse,human,macaque,marmoset,mouse,opossum,orangutan,panda,pig,platypus,rabbit,rat, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0.007015, 0 0 0 0 ENSG00000240269.2 ENST00000418352.2 chr22:23154489-23241834 2 325 87018 encompassing 0 0 0,0,0 0 0,0,0 0 0 0 8.90153846153846 1.52211036796985 1.578 116.233846153846 6.48916316164472 1.998 0 0 cat,chimp,cow,dog,elephant,guinea_pig,horse,human,macaque,marmoset,mouse,opossum,orangutan,panda,pig,platypus,rabbit,rat, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0.007015, 0 0 0 0 ENSG00000240269.2 ENST00000448061.2 chr22:23154489-23247204 2 325 92388 encompassing 0 0 0,1,0 0 0,0,0 0 0 0 5.88307692307692 2.06704333896177 0 128.341538461538 6.95998398060354 1.854 0 0 cat,chimp,cow,dog,elephant,guinea_pig,horse,human,macaque,marmoset,mouse,opossum,orangutan,panda,pig,platypus,rabbit,rat, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0.007015, 0 0 0 0 ENSG00000236611.1 ENST00000450776.1 chr22:23668803-23670680 2 344 1531 intergenic -0.21 1 0,1,0 0 0,0,0 0 0 0 0 2.34160679294579 0 0 7.04964075767472 0 0 0 chimp,horse,human,marmoset,orangutan,pig, lincRNA lincRNA A549@0,AG04450@0.0068065,BJ@0.0103405,GM12878@0.0233045,H1HESC@0.0351645,HELAS3@0,HEPG2@0.0169355,HMEC@0,HSMM@0.005947,HUVEC@0,K562@0,MCF7@0.029712,NHEK@0.0922503,NHLF@0,SKNSHRA@0.112811, 0 0 0 0 ENSG00000234928.1 ENST00000449711.1 chr22:23775751-23777258 3 914 589 intergenic -0.32 0 0,1,0 0 0,0,0 0 129.575551782683 0 0 142.315789473684 0 0 142.315789473684 0 0 0 chimp,horse,human,macaque,marmoset,orangutan, lincRNA lincRNA A549@0.149948,AG04450@0,BJ@0,GM12878@0,H1HESC@0.0113365,HELAS3@0,HEPG2@0.020622,HMEC@0,HSMM@0,HUVEC@0,K562@0.030571,MCF7@0.0187285,NHEK@0,NHLF@0,SKNSHRA@0.0024785, 0 0 0 0 ENSG00000234928.1 ENST00000428415.1 chr22:23776358-23776918 2 335 223 intergenic 0.94 0 0,0,0 0 0,0,0 155.820895522388 0 23.76 174.432835820896 0 24.986 174.432835820896 0 24.986 0 0 cat,chimp,cow,elephant,human,macaque,marmoset,mouse,orangutan,panda,pig, lincRNA lincRNA A549@0.149948,AG04450@0,BJ@0,GM12878@0,H1HESC@0.0113365,HELAS3@0,HEPG2@0.020622,HMEC@0,HSMM@0,HUVEC@0,K562@0.030571,MCF7@0.0187285,NHEK@0,NHLF@0,SKNSHRA@0.0024785, 189 2 122 2 ENSG00000178248.10 ENST00000320372.9 chr22:23804273-23829167 12 1566 23306 intergenic 27.75 1 0,0,1 0 0,0,0 0 0 0 0 0 0 65.8939974457216 0 0 0 0 human,macaque,orangutan, lincRNA lincRNA A549@0.005212,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0.0015565,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0.0522025, 0 0 0 0 ENSG00000178248.10 ENST00000539460.1 chr22:23812181-23829093 9 711 16185 intergenic -0.80 0 0,0,0 0 0,0,0 0 0 0 0 0 0 109.022503516174 0 0 0 1 chimp,human,macaque,orangutan, lincRNA lincRNA A549@0.005212,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0.0015565,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0.0522025, 0 0 0 0 ENSG00000225413.2 ENST00000432249.2 chr22:23854681-23855789 2 475 631 intergenic 1.36 0 0,0,0 0 0,0,0 0 0 0 0 11.7194928684628 0 0 12.5007923930269 0 0 0 chimp,dog,human,macaque,marmoset,orangutan,panda, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0.0051875,HELAS3@0.111529,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0.0332955, 0 0 0 0 ENSG00000224277.1 ENST00000454863.1 chr22:23909251-23915309 5 564 5486 intergenic -3.18 1 0,1,0 0 0,0,0 0 0 0 0 0 0 59.0957446808511 53.4316441851987 236.904 0 0 chimp,horse,human,macaque,marmoset,orangutan, antisense antisense A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000224277.1 ENST00000458318.1 chr22:23909251-23915694 4 429 6008 exonic 0.67 0 0,1,0 0 0,0,0 0 0 0 4.16083916083916 2.33288948069241 0 82.995337995338 53.0862183754993 236.904 0 0 chimp,human,macaque,marmoset,orangutan, antisense antisense A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000232545.1 ENST00000444093.1 chr22:24497652-24499317 3 555 1106 intronic 1.13 0 0,0,1 0 0,0,0 141.56036036036 77.1374321880651 0 157.021621621622 32.5515370705244 0 152.264864864865 33.6645569620253 0 0 0 cat,chimp,dog,elephant,guinea_pig,horse,human,macaque,mouse,orangutan,pig,rabbit,rat, sense_intronic sense_intronic A549@0.164056,AG04450@0.0772695,BJ@0.177605,GM12878@0.142355,H1HESC@0.228891,HELAS3@0.557323,HEPG2@0.977471,HMEC@0,HSMM@0.124429,HUVEC@0.277717,K562@0.0615515,MCF7@0.335786,NHEK@0.661308,NHLF@0,SKNSHRA@0.402461, 0 0 0 0 ENSG00000228923.1 ENST00000432032.1 chr22:24912476-24914354 2 478 1398 intronic -7.50 0 0,0,1 0 0,0,0 33.6234309623431 25.1974248927039 27.224 0 5.71602288984263 2.728 0 5.82188841201717 2.849 0 0 chimp,dog,human,marmoset,orangutan,panda, antisense antisense A549@0,AG04450@0,BJ@0,GM12878@0.272827,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0.112326, 0 0 0 0 ENSG00000230947.1 ENST00000438893.1 chr22:24994021-24995365 2 363 979 intronic -13.24 0 0,1,0 0 0,0,0 0 0 0 0 0 0 0 0 0 0 0 chimp,human,macaque,marmoset,orangutan, sense_intronic sense_intronic A549@0.0056075,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0.0110745, 0 0 0 0 ENSG00000203280.3 ENST00000366110.3 chr22:25498407-25508659 5 945 9299 intronic 1.00 1 0,0,1 0 0,0,0 30.5100529100529 11.6582428218088 7.26 70.5862433862434 18.7231960425852 15.76 97.5714285714286 18.4605871599097 15.894 1 1 chimp,human,macaque,marmoset,orangutan, antisense antisense A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0.131814,HEPG2@0.525679,HMEC@0,HSMM@0.118638,HUVEC@0.162191,K562@0,MCF7@0.012746,NHEK@0.00806233,NHLF@0,SKNSHRA@0.0023925, 0 0 0 0 ENSG00000236641.1 ENST00000454253.1 chr22:25608709-25609652 2 480 461 intergenic 0.69 0 0,0,0 0 0,0,0 0 0 0 0 0 0 0 0 0 0 0 chimp,human,macaque,marmoset,orangutan, lincRNA lincRNA A549@0.011461,AG04450@0,BJ@0,GM12878@0,H1HESC@0.034553,HELAS3@0.019396,HEPG2@0.0532315,HMEC@0.008495,HSMM@0.0089985,HUVEC@0.15535,K562@0,MCF7@0.0381075,NHEK@0.137274,NHLF@0,SKNSHRA@0.048367, 0 0 0 0 ENSG00000233577.1 ENST00000411511.1 chr22:25675496-25678258 2 426 2334 intergenic 4.90 0 0,0,0 0 0,0,0 0 0 0 0 24.8778920308483 66.096 0 14.796058269066 103.181 0 0 cat,chimp,cow,guinea_pig,human,macaque,marmoset,orangutan,panda, lincRNA processed_transcript A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0.197766,HELAS3@0,HEPG2@0,HMEC@0.007209,HSMM@0,HUVEC@0,K562@0,MCF7@0.0035395,NHEK@0,NHLF@0.003435,SKNSHRA@0, 0 0 0 0 ENSG00000233577.1 ENST00000432495.1 chr22:25677253-25678641 3 423 961 intergenic 4.90 0 0,0,1 0 0,0,0 0 0 0 0 6.88345473465141 66.096 0 7.20187304890739 103.181 0 0 chimp,elephant,guinea_pig,human,macaque,marmoset,orangutan, lincRNA processed_transcript A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0.197766,HELAS3@0,HEPG2@0,HMEC@0.007209,HSMM@0,HUVEC@0,K562@0,MCF7@0.0035395,NHEK@0,NHLF@0.003435,SKNSHRA@0, 0 0 0 0 ENSG00000233577.1 ENST00000444383.1 chr22:25677804-25679061 2 566 689 intergenic 4.90 0 0,1,0 1 0,0,0 0 0 0 74.13074204947 43.9680696661829 0 93.8674911660777 79.4194484760523 1.645 0 0 cat,chimp,elephant,human,macaque,marmoset,mouse,orangutan,panda,pig, lincRNA processed_transcript A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0.197766,HELAS3@0,HEPG2@0,HMEC@0.007209,HSMM@0,HUVEC@0,K562@0,MCF7@0.0035395,NHEK@0,NHLF@0.003435,SKNSHRA@0, 156 2 98 2 ENSG00000234884.1 ENST00000412773.1 chr22:25957084-25960429 2 486 2857 intergenic -7.91 0 0,0,0 0 0,0,0 0 6.11690584529226 100.062 0 16.960798039902 158.162 0 17.3153657682884 132.013 0 0 cat,chimp,cow,dog,elephant,guinea_pig,horse,human,macaque,marmoset,orangutan,panda,pig,rabbit, antisense antisense A549@0.009698,AG04450@0,BJ@0,GM12878@0.0279045,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0.0253615, 156 2 98 2 ENSG00000234884.1 ENST00000422876.1 chr22:25957091-25960117 2 434 2590 intergenic -7.91 0 0,0,0 0 0,0,0 0 6.74749034749035 82.008 0 18.7092664092664 144.836 0 19.1003861003861 122.223 0 0 cat,chimp,dog,elephant,guinea_pig,horse,human,macaque,marmoset,orangutan,panda,pig,rabbit, antisense antisense A549@0.009698,AG04450@0,BJ@0,GM12878@0.0279045,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0.0253615, 0 0 0 0 ENSG00000234884.1 ENST00000453811.1 chr22:25959068-25960226 3 448 706 intergenic 1.59 0 0,0,1 0 0,0,0 0 0 100.062 37.0803571428571 53.21388101983 158.162 37.8214285714286 54.0793201133144 132.013 0 0 cat,chimp,dog,elephant,horse,human,macaque,marmoset,orangutan,panda, antisense antisense A549@0.009698,AG04450@0,BJ@0,GM12878@0.0279045,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0.0253615, 0 0 0 0 ENSG00000237387.1 ENST00000413494.1 chr22:25976208-25977349 2 658 481 intronic -3.79 0 0,0,0 0 0,0,0 0 0 0 0 0 0 0 0 0 0 0 human,macaque,marmoset,orangutan, antisense antisense A549@0,AG04450@0,BJ@0,GM12878@0.0035515,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0.0040755, 0 0 0 0 ENSG00000231933.1 ENST00000453457.1 chr22:26288323-26295802 2 403 7074 intronic 1.30 0 0,0,0 0 0,0,0 0 27.1471586089907 0 0 33.6372632174159 1.984 0 36.6829233813967 2.008 0 0 cat,chimp,dog,elephant,guinea_pig,horse,human,macaque,marmoset,orangutan, antisense antisense A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000232464.1 ENST00000436423.1 chr22:26355040-26379492 2 470 23980 intronic -2.57 0 0,0,1 0 0,0,0 0 24.3842368640534 0 0 23.7015429524604 1.434 0 25.4003336113428 1.458 0 0 chimp,elephant,guinea_pig,human,macaque,orangutan, antisense antisense A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000236464.1 ENST00000420391.1 chr22:26557800-26560269 2 186 2281 intergenic -6.90 1 0,0,0 0 0,0,0 227.575268817204 2.11749232792635 15.456 168.10752688172 13.499342393687 11.849 202.225806451613 11.1091626479614 12.463 0 0 cat,chimp,cow,dog,elephant,guinea_pig,horse,human,macaque,marmoset,orangutan,panda,pig, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0.0120685, 0 0 0 0 ENSG00000229770.1 ENST00000434510.1 chr22:26557876-26559180 3 354 946 intergenic 8.28 0 0,0,0 0 0,0,0 0 0 8.323 65.7966101694915 0 1.53 50.8248587570621 0 2.075 0 0 chimp,cow,dog,elephant,guinea_pig,horse,human,macaque,marmoset,orangutan,panda,pig,rabbit,rat, antisense antisense A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0.0174325,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0.063597, 0 0 0 0 ENSG00000224192.2 ENST00000414989.2 chr22:26637297-26650058 5 530 12223 intronic -5.06 0 0,0,0 0 0,0,0 6.55094339622642 13.3922114047288 22.568 6.73584905660377 14.1839973819848 15.464 15.7547169811321 17.580381248466 15.935 0 0 chimp,dog,human,macaque,marmoset,orangutan, antisense non_coding A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000225783.2 ENST00000421867.1 chr22:27042392-27061841 3 959 18486 intergenic 9.94 0 0,1,0 0 0,0,0 0 9.14627285513362 0 8.77059436913451 16.2161094882614 13.6 8.75182481751825 16.9178297089689 13.827 0 0 chimp,cow,elephant,horse,human,macaque,marmoset,orangutan,panda,pig, lincRNA processed_transcript A549@1.65966,AG04450@4.85621,BJ@0.945998,GM12878@1.03685,H1HESC@15.9231,HELAS3@0.078705,HEPG2@0.0304305,HMEC@0.069601,HSMM@0.046962,HUVEC@0.143145,K562@0.224686,MCF7@0.0641045,NHEK@0.0916583,NHLF@1.01036,SKNSHRA@13.5054, 0 0 0 0 ENSG00000225783.2 ENST00000418918.1 chr22:27042604-27061603 3 583 18412 intergenic 4.98 0 0,0,1 0 0,0,0 0 9.18303280469259 0 10.8181818181818 16.2812839452531 8.432 10.7598627787307 16.9858244623072 8.627 0 0 chimp,cow,elephant,horse,human,macaque,marmoset,orangutan,panda,pig, lincRNA processed_transcript A549@1.65966,AG04450@4.85621,BJ@0.945998,GM12878@1.03685,H1HESC@15.9231,HELAS3@0.078705,HEPG2@0.0304305,HMEC@0.069601,HSMM@0.046962,HUVEC@0.143145,K562@0.224686,MCF7@0.0641045,NHEK@0.0916583,NHLF@1.01036,SKNSHRA@13.5054, 0 0 0 0 ENSG00000225783.2 ENST00000440347.1 chr22:27043175-27061701 4 539 17981 intergenic 2.59 0 0,0,0 0 0,0,0 0 9.40314776708748 0 15.6048237476809 16.6715421834158 8.432 15.5714285714286 17.3929703575997 8.627 0 0 chimp,elephant,horse,human,macaque,marmoset,orangutan,panda,rabbit, lincRNA processed_transcript A549@1.65966,AG04450@4.85621,BJ@0.945998,GM12878@1.03685,H1HESC@15.9231,HELAS3@0.078705,HEPG2@0.0304305,HMEC@0.069601,HSMM@0.046962,HUVEC@0.143145,K562@0.224686,MCF7@0.0641045,NHEK@0.0916583,NHLF@1.01036,SKNSHRA@13.5054, 0 0 0 0 ENSG00000225783.2 ENST00000450203.1 chr22:27043188-27061873 3 576 18105 intergenic 5.07 0 0,0,0 0 0,0,0 0 9.33874620270644 0 14.6024305555556 16.5573598453466 8.432 14.5711805555556 17.2738470035902 8.627 0 0 chimp,cow,dog,elephant,horse,human,macaque,marmoset,orangutan,panda,pig, lincRNA processed_transcript A549@1.65966,AG04450@4.85621,BJ@0.945998,GM12878@1.03685,H1HESC@15.9231,HELAS3@0.078705,HEPG2@0.0304305,HMEC@0.069601,HSMM@0.046962,HUVEC@0.143145,K562@0.224686,MCF7@0.0641045,NHEK@0.0916583,NHLF@1.01036,SKNSHRA@13.5054, 0 0 0 0 ENSG00000225783.2 ENST00000430483.1 chr22:27043192-27061773 4 589 17986 intergenic 2.59 0 0,0,0 0 0,0,0 0 9.40053374847103 0 14.2801358234295 16.666907594796 8.432 14.2495755517827 17.3881352162793 8.627 0 0 cat,chimp,cow,elephant,human,macaque,marmoset,orangutan,pig,rabbit, lincRNA processed_transcript A549@1.65966,AG04450@4.85621,BJ@0.945998,GM12878@1.03685,H1HESC@15.9231,HELAS3@0.078705,HEPG2@0.0304305,HMEC@0.069601,HSMM@0.046962,HUVEC@0.143145,K562@0.224686,MCF7@0.0641045,NHEK@0.0916583,NHLF@1.01036,SKNSHRA@13.5054, 0 0 0 0 ENSG00000225783.2 ENST00000439738.1 chr22:27053190-27061836 3 625 8017 intergenic -1.87 0 0,0,0 1 0,0,0 0 18.9494823500062 0 19.0576 31.2050642384932 4.55 24.1296 32.2548334788574 6.277 0 0 cat,chimp,cow,elephant,horse,human,macaque,marmoset,orangutan,pig,rabbit, lincRNA processed_transcript A549@1.65966,AG04450@4.85621,BJ@0.945998,GM12878@1.03685,H1HESC@15.9231,HELAS3@0.078705,HEPG2@0.0304305,HMEC@0.069601,HSMM@0.046962,HUVEC@0.143145,K562@0.224686,MCF7@0.0641045,NHEK@0.0916583,NHLF@1.01036,SKNSHRA@13.5054, 0 0 0 0 ENSG00000225783.2 ENST00000422403.1 chr22:27053220-27061733 4 590 7917 intergenic 2.59 0 0,1,0 1 0,0,0 127.68813559322 9.56246052797777 0 190.628813559322 18.3025135783756 8.4 185.059322033898 19.783124921056 13.317 0 0 chimp,cow,dog,guinea_pig,horse,human,macaque,marmoset,mouse,orangutan,panda,pig,rabbit, lincRNA processed_transcript A549@1.65966,AG04450@4.85621,BJ@0.945998,GM12878@1.03685,H1HESC@15.9231,HELAS3@0.078705,HEPG2@0.0304305,HMEC@0.069601,HSMM@0.046962,HUVEC@0.143145,K562@0.224686,MCF7@0.0641045,NHEK@0.0916583,NHLF@1.01036,SKNSHRA@13.5054, 0 0 0 0 ENSG00000225783.2 ENST00000436238.1 chr22:27053220-27062159 3 844 8091 intergenic 2.59 0 0,1,1 1 0,0,0 0 18.7761710542578 0 9.96563981042654 30.919663824002 8.4 9.94431279620853 31.959831912001 13.317 0 0 chimp,cow,dog,elephant,horse,human,macaque,marmoset,orangutan,panda,pig, lincRNA processed_transcript A549@1.65966,AG04450@4.85621,BJ@0.945998,GM12878@1.03685,H1HESC@15.9231,HELAS3@0.078705,HEPG2@0.0304305,HMEC@0.069601,HSMM@0.046962,HUVEC@0.143145,K562@0.224686,MCF7@0.0641045,NHEK@0.0916583,NHLF@1.01036,SKNSHRA@13.5054, 0 0 0 0 ENSG00000225783.2 ENST00000425476.1 chr22:27053231-27061779 3 564 7980 intergenic 0.88 0 0,1,0 1 0,0,0 0 19.037343358396 0 14.9131205673759 31.3497493734336 8.4 14.8812056737589 32.4043859649123 13.317 0 0 cat,chimp,cow,dog,elephant,guinea_pig,horse,human,macaque,marmoset,orangutan,rabbit, lincRNA processed_transcript A549@1.65966,AG04450@4.85621,BJ@0.945998,GM12878@1.03685,H1HESC@15.9231,HELAS3@0.078705,HEPG2@0.0304305,HMEC@0.069601,HSMM@0.046962,HUVEC@0.143145,K562@0.224686,MCF7@0.0641045,NHEK@0.0916583,NHLF@1.01036,SKNSHRA@13.5054, 0 0 0 0 ENSG00000225783.2 ENST00000455640.1 chr22:27053244-27061882 3 609 8025 intergenic 1.36 0 0,1,0 1 0,0,0 0 18.9305919003115 0 13.8111658456486 31.1739563862928 8.4 13.7816091954023 32.2226791277259 13.317 0 0 cat,chimp,cow,dog,elephant,horse,human,macaque,marmoset,orangutan,panda,pig,rabbit, lincRNA processed_transcript A549@1.65966,AG04450@4.85621,BJ@0.945998,GM12878@1.03685,H1HESC@15.9231,HELAS3@0.078705,HEPG2@0.0304305,HMEC@0.069601,HSMM@0.046962,HUVEC@0.143145,K562@0.224686,MCF7@0.0641045,NHEK@0.0916583,NHLF@1.01036,SKNSHRA@13.5054, 0 0 0 0 ENSG00000225783.2 ENST00000451141.1 chr22:27053244-27061913 2 566 8101 intergenic -3.85 0 0,1,0 1 0,0,0 0 18.7529934575978 0 14.8604240282686 30.8814961115912 8.4 14.8286219081272 31.9203801999753 13.317 0 0 cat,chimp,cow,dog,elephant,horse,human,macaque,marmoset,orangutan,panda,pig,rabbit, lincRNA processed_transcript A549@1.65966,AG04450@4.85621,BJ@0.945998,GM12878@1.03685,H1HESC@15.9231,HELAS3@0.078705,HEPG2@0.0304305,HMEC@0.069601,HSMM@0.046962,HUVEC@0.143145,K562@0.224686,MCF7@0.0641045,NHEK@0.0916583,NHLF@1.01036,SKNSHRA@13.5054, 0 0 0 0 ENSG00000225783.2 ENST00000452429.1 chr22:27053248-27061987 4 890 7843 intergenic -2.37 0 0,1,1 1 0,0,0 84.647191011236 9.65268392196863 0 126.37191011236 18.4752008160143 8.4 122.679775280899 19.9697819711845 13.317 0 0 chimp,cow,horse,human,macaque,marmoset,orangutan,panda,pig,rabbit, lincRNA processed_transcript A549@1.65966,AG04450@4.85621,BJ@0.945998,GM12878@1.03685,H1HESC@15.9231,HELAS3@0.078705,HEPG2@0.0304305,HMEC@0.069601,HSMM@0.046962,HUVEC@0.143145,K562@0.224686,MCF7@0.0641045,NHEK@0.0916583,NHLF@1.01036,SKNSHRA@13.5054, 0 0 0 0 ENSG00000225783.2 ENST00000423278.1 chr22:27053336-27072438 5 10211 8883 intergenic 3.75 0 0,0,1 1 0,0,0 62.3524630300656 5.07103456039626 0 54.8547644696896 12.2938196555218 8.4 52.7488982469885 13.7396149949341 13.317 0 0 chimp,human,orangutan, lincRNA processed_transcript A549@1.65966,AG04450@4.85621,BJ@0.945998,GM12878@1.03685,H1HESC@15.9231,HELAS3@0.078705,HEPG2@0.0304305,HMEC@0.069601,HSMM@0.046962,HUVEC@0.143145,K562@0.224686,MCF7@0.0641045,NHEK@0.0916583,NHLF@1.01036,SKNSHRA@13.5054, 0 0 0 0 ENSG00000225783.2 ENST00000413665.1 chr22:27053422-27062144 3 1038 7680 intergenic 0.88 0 0,1,1 1 0,0,0 82.7052023121387 5.86536458333333 20.148 122.342003853565 14.21953125 29.575 118.736994219653 15.891796875 33.827 0 0 cat,chimp,cow,dog,elephant,horse,human,macaque,marmoset,orangutan, lincRNA processed_transcript A549@1.65966,AG04450@4.85621,BJ@0.945998,GM12878@1.03685,H1HESC@15.9231,HELAS3@0.078705,HEPG2@0.0304305,HMEC@0.069601,HSMM@0.046962,HUVEC@0.143145,K562@0.224686,MCF7@0.0641045,NHEK@0.0916583,NHLF@1.01036,SKNSHRA@13.5054, 0 0 0 0 ENSG00000225783.2 ENST00000421151.1 chr22:27053432-27072438 4 10064 8936 intergenic 3.75 0 0,1,1 1 0,0,0 60.7824920508744 5.04095792300806 24.528 52.6879968203497 12.4491942703671 35.625 50.6302662957075 13.8953670546106 39.687 0 0 chimp,human,orangutan, lincRNA processed_transcript A549@1.65966,AG04450@4.85621,BJ@0.945998,GM12878@1.03685,H1HESC@15.9231,HELAS3@0.078705,HEPG2@0.0304305,HMEC@0.069601,HSMM@0.046962,HUVEC@0.143145,K562@0.224686,MCF7@0.0641045,NHEK@0.0916583,NHLF@1.01036,SKNSHRA@13.5054, 0 0 0 0 ENSG00000225783.2 ENST00000430080.1 chr22:27053484-27072438 5 10137 8809 intergenic 3.75 0 0,1,1 1 0,0,0 58.0979579757325 5.11363378363038 47.304 49.4063332346848 12.3970938812578 67.085 47.468777744895 13.8550346236803 70.159 0 0 chimp,human,orangutan, lincRNA processed_transcript A549@1.65966,AG04450@4.85621,BJ@0.945998,GM12878@1.03685,H1HESC@15.9231,HELAS3@0.078705,HEPG2@0.0304305,HMEC@0.069601,HSMM@0.046962,HUVEC@0.143145,K562@0.224686,MCF7@0.0641045,NHEK@0.0916583,NHLF@1.01036,SKNSHRA@13.5054, 0 0 0 0 ENSG00000225783.2 ENST00000456129.1 chr22:27053484-27072438 4 9938 9010 intergenic 3.75 0 0,1,1 1 0,0,0 59.2613201851479 4.99955604883463 47.304 50.190380358221 12.3469478357381 67.085 48.2059770577581 13.781243063263 70.159 0 0 chimp,human,orangutan, lincRNA processed_transcript A549@1.65966,AG04450@4.85621,BJ@0.945998,GM12878@1.03685,H1HESC@15.9231,HELAS3@0.078705,HEPG2@0.0304305,HMEC@0.069601,HSMM@0.046962,HUVEC@0.143145,K562@0.224686,MCF7@0.0641045,NHEK@0.0916583,NHLF@1.01036,SKNSHRA@13.5054, 0 0 0 0 ENSG00000225783.2 ENST00000458302.1 chr22:27053552-27061816 4 586 7672 intergenic 2.59 0 0,1,0 1 0,0,0 49.3310580204778 5.87148070907195 77.088 82.4931740614334 14.2343587069864 108.225 80.3225255972696 15.9083680917623 110.007 0 0 cat,chimp,cow,elephant,human,macaque,marmoset,orangutan,pig,rabbit, lincRNA processed_transcript A549@1.65966,AG04450@4.85621,BJ@0.945998,GM12878@1.03685,H1HESC@15.9231,HELAS3@0.078705,HEPG2@0.0304305,HMEC@0.069601,HSMM@0.046962,HUVEC@0.143145,K562@0.224686,MCF7@0.0641045,NHEK@0.0916583,NHLF@1.01036,SKNSHRA@13.5054, 0 0 0 0 ENSG00000225783.2 ENST00000419237.1 chr22:27053553-27062002 2 572 7875 intergenic -3.85 0 1,1,1 1 0,0,0 49.7727272727273 5.72012698412698 77.526 83.4545454545455 13.8674285714286 108.83 81.263986013986 15.4982857142857 110.593 0 0 cat,chimp,cow,dog,elephant,horse,human,macaque,marmoset,orangutan,panda,pig, lincRNA processed_transcript A549@1.65966,AG04450@4.85621,BJ@0.945998,GM12878@1.03685,H1HESC@15.9231,HELAS3@0.078705,HEPG2@0.0304305,HMEC@0.069601,HSMM@0.046962,HUVEC@0.143145,K562@0.224686,MCF7@0.0641045,NHEK@0.0916583,NHLF@1.01036,SKNSHRA@13.5054, 0 0 0 0 ENSG00000225783.2 ENST00000449717.1 chr22:27053575-27061643 4 503 7559 intergenic -2.37 0 0,1,1 1 0,0,0 37.4433399602386 5.95925386955947 87.162 68.441351888668 14.4471490937955 122.14 66.7813121272366 16.146183357587 123.485 0 0 chimp,cow,guinea_pig,horse,human,macaque,marmoset,orangutan,panda,pig, lincRNA processed_transcript A549@1.65966,AG04450@4.85621,BJ@0.945998,GM12878@1.03685,H1HESC@15.9231,HELAS3@0.078705,HEPG2@0.0304305,HMEC@0.069601,HSMM@0.046962,HUVEC@0.143145,K562@0.224686,MCF7@0.0641045,NHEK@0.0916583,NHLF@1.01036,SKNSHRA@13.5054, 0 0 0 0 ENSG00000225783.2 ENST00000453023.1 chr22:27053578-27061757 3 569 7606 intergenic 0.88 0 0,1,0 1 0,0,0 30.7908611599297 5.92242966079411 88.476 57.3128295254833 14.3578753615567 123.955 55.9455184534271 16.0464107283723 125.243 0 0 cat,chimp,cow,dog,elephant,guinea_pig,horse,human,macaque,marmoset,orangutan,pig,rabbit, lincRNA processed_transcript A549@1.65966,AG04450@4.85621,BJ@0.945998,GM12878@1.03685,H1HESC@15.9231,HELAS3@0.078705,HEPG2@0.0304305,HMEC@0.069601,HSMM@0.046962,HUVEC@0.143145,K562@0.224686,MCF7@0.0641045,NHEK@0.0916583,NHLF@1.01036,SKNSHRA@13.5054, 0 0 0 0 ENSG00000206028.1 ENST00000382641.1 chr22:27063656-27068617 3 2610 2347 intergenic 3.21 0 0,1,1 0 0,0,0 64.304214559387 71.7106945036217 180.78 54.3463601532567 60.3579037068598 111.597 51.1578544061303 59.7571367703451 108.758 0 0 chimp,human,macaque,orangutan, lincRNA processed_transcript A549@0.019773,AG04450@0.015665,BJ@0.028597,GM12878@0.311079,H1HESC@0.0516415,HELAS3@0.013492,HEPG2@0.014502,HMEC@0.003134,HSMM@0.023963,HUVEC@0.00535,K562@0.026179,MCF7@0.0271715,NHEK@0.0165217,NHLF@0.0044805,SKNSHRA@0.265792, 0 0 0 0 ENSG00000244625.1 ENST00000444388.1 chr22:27068730-27130418 5 913 60767 intergenic 1.53 0 0,1,1 1 0,0,0 0 12.5635624598878 167.834 0 11.445751806079 141.844 1.54435925520263 12.0618098639064 133.522 0 0 chimp,horse,human,macaque,marmoset,orangutan, lincRNA processed_transcript A549@2.16737,AG04450@1.65855,BJ@1.58928,GM12878@4.92397,H1HESC@2.22943,HELAS3@0.408084,HEPG2@0.233972,HMEC@0.451856,HSMM@0.747663,HUVEC@0.980622,K562@1.85784,MCF7@1.32109,NHEK@0.591858,NHLF@1.16275,SKNSHRA@3.737, 0 0 0 0 ENSG00000244625.1 ENST00000450963.1 chr22:27068740-27172811 5 653 103410 intergenic 1.53 0 0,1,0 1 0,0,0 0 12.2174257808723 167.834 2.36600306278714 13.4298133642781 141.844 8.43797856049004 16.4905715114592 133.522 0 0 chimp,horse,human,macaque,marmoset,pig, lincRNA processed_transcript A549@2.16737,AG04450@1.65855,BJ@1.58928,GM12878@4.92397,H1HESC@2.22943,HELAS3@0.408084,HEPG2@0.233972,HMEC@0.451856,HSMM@0.747663,HUVEC@0.980622,K562@1.85784,MCF7@1.32109,NHEK@0.591858,NHLF@1.16275,SKNSHRA@3.737, 0 0 0 0 ENSG00000244625.1 ENST00000449017.1 chr22:27068754-27113422 3 580 44084 intergenic -9.88 0 0,1,0 1 0,0,0 0 11.9138916613737 167.834 0 10.1493966064785 141.844 2.43103448275862 10.9921740313946 133.522 0 0 chimp,cow,dog,elephant,human,macaque,marmoset, lincRNA processed_transcript A549@2.16737,AG04450@1.65855,BJ@1.58928,GM12878@4.92397,H1HESC@2.22943,HELAS3@0.408084,HEPG2@0.233972,HMEC@0.451856,HSMM@0.747663,HUVEC@0.980622,K562@1.85784,MCF7@1.32109,NHEK@0.591858,NHLF@1.16275,SKNSHRA@3.737, 0 0 0 0 ENSG00000244625.1 ENST00000435162.1 chr22:27068768-27174598 5 755 105067 intergenic 0.24 0 0,1,0 1 0,0,0 0 12.0247461143842 167.834 2.04635761589404 13.378786869331 141.844 7.29801324503311 16.3962328799718 133.522 0 0 chimp,dog,elephant,horse,human,macaque,marmoset,orangutan,panda,pig, lincRNA processed_transcript A549@2.16737,AG04450@1.65855,BJ@1.58928,GM12878@4.92397,H1HESC@2.22943,HELAS3@0.408084,HEPG2@0.233972,HMEC@0.451856,HSMM@0.747663,HUVEC@0.980622,K562@1.85784,MCF7@1.32109,NHEK@0.591858,NHLF@1.16275,SKNSHRA@3.737, 0 0 0 0 ENSG00000244625.1 ENST00000437071.1 chr22:27068768-27176170 6 1000 106392 intergenic 5.19 1 0,1,0 1 0,0,0 0 12.8076265132717 167.834 2.979 14.1404428904429 141.844 7.016 17.1337600571472 133.522 0 0 chimp,dog,elephant,horse,human,macaque,marmoset, lincRNA processed_transcript A549@2.16737,AG04450@1.65855,BJ@1.58928,GM12878@4.92397,H1HESC@2.22943,HELAS3@0.408084,HEPG2@0.233972,HMEC@0.451856,HSMM@0.747663,HUVEC@0.980622,K562@1.85784,MCF7@1.32109,NHEK@0.591858,NHLF@1.16275,SKNSHRA@3.737, 0 0 0 0 ENSG00000244625.1 ENST00000440816.1 chr22:27068777-27172845 5 586 103474 intergenic -5.83 0 0,1,0 1 0,0,0 0 12.2098691458724 167.834 2.63651877133106 13.4215068519628 141.844 9.40273037542662 16.480371880859 133.522 0 0 chimp,human,macaque,marmoset,orangutan,pig, lincRNA processed_transcript A549@2.16737,AG04450@1.65855,BJ@1.58928,GM12878@4.92397,H1HESC@2.22943,HELAS3@0.408084,HEPG2@0.233972,HMEC@0.451856,HSMM@0.747663,HUVEC@0.980622,K562@1.85784,MCF7@1.32109,NHEK@0.591858,NHLF@1.16275,SKNSHRA@3.737, 0 0 0 0 ENSG00000244625.1 ENST00000421253.1 chr22:27068819-27114355 3 589 44943 intergenic -5.83 0 0,1,1 1 0,0,0 0 11.68618027279 167.834 0 9.9554101862359 141.844 0 10.7820795229513 134.932 0 0 chimp,human,macaque,marmoset,orangutan, lincRNA processed_transcript A549@2.16737,AG04450@1.65855,BJ@1.58928,GM12878@4.92397,H1HESC@2.22943,HELAS3@0.408084,HEPG2@0.233972,HMEC@0.451856,HSMM@0.747663,HUVEC@0.980622,K562@1.85784,MCF7@1.32109,NHEK@0.591858,NHLF@1.16275,SKNSHRA@3.737, 0 0 0 0 ENSG00000244625.1 ENST00000446336.1 chr22:27113215-27138801 3 456 25126 intergenic -4.64 0 0,0,1 0 0,0,0 0 13.4830056515164 0 0 18.0453315290934 0 0 19.1023242856006 0 0 0 chimp,guinea_pig,horse,human,macaque,marmoset,orangutan,pig, lincRNA processed_transcript A549@2.16737,AG04450@1.65855,BJ@1.58928,GM12878@4.92397,H1HESC@2.22943,HELAS3@0.408084,HEPG2@0.233972,HMEC@0.451856,HSMM@0.747663,HUVEC@0.980622,K562@1.85784,MCF7@1.32109,NHEK@0.591858,NHLF@1.16275,SKNSHRA@3.737, 0 0 0 0 ENSG00000244625.1 ENST00000417083.1 chr22:27113332-27118135 3 703 4096 intergenic -0.80 1 0,0,1 0 0,0,0 0 0 0 0 2.26416015625 0 0 2.93896484375 0 0 0 chimp,cow,horse,human,macaque,marmoset,orangutan,panda, lincRNA processed_transcript A549@2.16737,AG04450@1.65855,BJ@1.58928,GM12878@4.92397,H1HESC@2.22943,HELAS3@0.408084,HEPG2@0.233972,HMEC@0.451856,HSMM@0.747663,HUVEC@0.980622,K562@1.85784,MCF7@1.32109,NHEK@0.591858,NHLF@1.16275,SKNSHRA@3.737, 0 0 0 0 ENSG00000223704.1 ENST00000434868.1 chr22:27254597-27261749 3 6040 1108 intergenic -1.53 0 0,1,1 0 0,0,0 53.082119205298 0 0 38.2453642384106 0 0 37.487582781457 0 0 0 0 chimp,human, lincRNA lincRNA A549@0.096583,AG04450@0.030174,BJ@0.0841415,GM12878@0.075848,H1HESC@0.0992025,HELAS3@0.0474005,HEPG2@0.0241215,HMEC@0,HSMM@0.0154225,HUVEC@0.0779135,K562@0.031441,MCF7@0.006093,NHEK@0.0474693,NHLF@0.0064075,SKNSHRA@0.135908, 0 0 0 0 ENSG00000235271.1 ENST00000447149.1 chr22:27299255-27304076 3 506 4311 intergenic -4.75 0 0,1,1 0 0,0,0 11.1086956521739 44.3579215959174 0 24.0869565217391 55.0208768267223 2.261 25.0237154150198 58.3878450475528 4.713 0 0 chimp,cow,guinea_pig,human,macaque,marmoset,orangutan, lincRNA lincRNA A549@0.0150355,AG04450@0,BJ@0.0047545,GM12878@0,H1HESC@0.0373875,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0.00398,HUVEC@0,K562@0,MCF7@0.00395,NHEK@0,NHLF@0,SKNSHRA@0.022036, 0 0 0 0 ENSG00000235271.1 ENST00000438113.1 chr22:27299303-27316574 3 514 16753 intergenic -1.13 0 0,0,0 0 0,0,0 10.9357976653697 31.270399331463 0 19.9416342412451 37.9633498477885 4.522 20.6653696498054 40.4855846714021 7.093 0 0 chimp,cow,dog,horse,human,macaque,marmoset,orangutan,panda,pig, lincRNA lincRNA A549@0.0150355,AG04450@0,BJ@0.0047545,GM12878@0,H1HESC@0.0373875,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0.00398,HUVEC@0,K562@0,MCF7@0.00395,NHEK@0,NHLF@0,SKNSHRA@0.022036, 0 0 0 0 ENSG00000236858.1 ENST00000453934.1 chr22:27444106-27456480 2 2381 9991 intergenic 3.50 1 0,1,1 0 0,0,0 31.1465770684586 10.971174056651 0 39.6711465770685 19.3952557301571 14.525 30.4489710205796 20.4602141927735 15.498 0 0 chimp,human,macaque,orangutan, lincRNA lincRNA A549@0.001159,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000231405.1 ENST00000430468.1 chr22:27539439-27555840 2 471 15928 intergenic 0 0 0,0,0 0 0,0,0 0 25.2982169763938 0 0 21.1921145153189 0 0 25.1487945755902 0 0 0 chimp,dog,human,macaque,marmoset, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0.03527,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000238195.1 ENST00000427360.1 chr22:27600173-27601088 2 306 607 intergenic 4.12 0 0,0,0 0 0,0,0 20.8496732026144 0 0 5.67320261437909 0 0 5.92483660130719 0 0 0 0 chimp,cow,dog,human,macaque,marmoset,orangutan,panda, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000233521.1 ENST00000444114.1 chr22:27617310-27620688 3 634 2740 intergenic -10.08 0 1,1,1 0 0,0,0 27.0283911671924 0 5.712 40.410094637224 1.2478102189781 10.181 28.2082018927445 2.47919708029197 11.441 0 0 chimp,human,macaque,marmoset,orangutan, lincRNA lincRNA A549@0.053843,AG04450@0.159513,BJ@0.164831,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0.826367,HUVEC@1.453,K562@0,MCF7@0,NHEK@0.004145,NHLF@0.224009,SKNSHRA@1.07789, 1 96 0 0 ENSG00000233521.1 ENST00000418271.1 chr22:27619258-27620618 3 549 807 intergenic -2.26 1 1,1,1 0 0,0,0 0 0 23.12 0 0 36.221 0 0 29.734 0 0 chimp,human,macaque,marmoset,orangutan,panda, lincRNA lincRNA A549@0.053843,AG04450@0.159513,BJ@0.164831,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0.826367,HUVEC@1.453,K562@0,MCF7@0,NHEK@0.004145,NHLF@0.224009,SKNSHRA@1.07789, 0 0 0 0 ENSG00000233574.1 ENST00000449126.1 chr22:27672201-27682310 3 271 9834 intergenic 0.46 0 0,0,1 0 0,0,0 0 18.3947528981086 0 0 7.74069554606467 3.876 0 8.67571690054912 6.087 0 0 chimp,human,macaque,marmoset,orangutan, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0.0165895, 0 0 0 0 ENSG00000223726.1 ENST00000454387.1 chr22:27703444-27714499 3 575 10476 intergenic 3.34 0 0,1,0 0 0,0,0 292.518260869565 28.8823978617793 68.003 386.130434782609 25.7548682703322 72.376 414.481739130435 31.3466017563956 79.037 0 0 chimp,human,macaque,marmoset,orangutan,panda,rabbit, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000226741.1 ENST00000426467.1 chr22:27706612-27713417 2 5050 1753 intergenic 5.65 1 0,0,0 0 0,0,0 56.410297029703 0 0 33.7720792079208 3.18653736451797 0 42.6936633663366 3.25156873930405 0 0 0 chimp,human,macaque,marmoset,orangutan, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0.027721,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0.039251,HUVEC@0.0197215,K562@0,MCF7@0.001592,NHEK@0,NHLF@0.0015275,SKNSHRA@0.0026995, 0 0 0 0 ENSG00000230051.1 ENST00000413244.1 chr22:27727748-27775226 4 567 46905 intergenic 0.17 0 0,0,0 0 0,0,0 0 9.56032405926873 0 0 8.43581707707068 0 0 9.73668052446434 0 0 0 chimp,human,macaque,marmoset,orangutan, lincRNA lincRNA A549@0.0038015,AG04450@0.0078505,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000227880.1 ENST00000440477.1 chr22:27853208-27856021 2 768 2043 intergenic 2.61 0 0,0,0 0 0,0,0 0 0 0 0 0 1.275 0 0 1.295 0 0 chimp,elephant,human,macaque,orangutan, lincRNA lincRNA A549@0,AG04450@0.016751,BJ@0.043838,GM12878@0,H1HESC@0.007719,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0.003429,NHLF@0.005068,SKNSHRA@0, 0 0 0 0 ENSG00000224027.1 ENST00000415655.1 chr22:27959800-27969534 3 574 9156 intergenic 2.59 0 0,0,0 0 0,0,0 47.5609756097561 31.2042376583661 32.34 70.7752613240418 36.2173438182613 70.102 75.0783972125435 39.979248580166 69.668 0 0 chimp,dog,human,macaque,marmoset,orangutan, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0.00221233,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000227838.1 ENST00000440255.1 chr22:28072556-28110959 5 814 37581 intergenic 6.47 0 0,0,0 0 0,0,0 0 13.5664032356776 25.878 9.76658476658477 14.5365211143929 78.67 9.77272727272727 16.7554349272239 78.826 0 0 chimp,human,macaque,marmoset,orangutan, lincRNA lincRNA A549@0.006745,AG04450@0,BJ@0.0059095,GM12878@0,H1HESC@1.64126,HELAS3@0.086602,HEPG2@0.0033305,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0.00866667,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000231495.1 ENST00000422833.1 chr22:28103578-28105929 2 113 2236 intergenic 0 0 0,0,0 0 0,0,0 0 0 0 0 0 6.473 56.1061946902655 0 19.834 0 0 chimp,cow,human,macaque,orangutan, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000226169.1 ENST00000417957.1 chr22:28112468-28117665 2 449 4746 intergenic 0.80 0 0,1,1 0 0,0,0 0 0 0 0 4.67804466919511 15.669 0 7.53834808259587 15.817 0 0 chimp,elephant,human,macaque,marmoset,orangutan, antisense antisense A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0.017654,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000235954.2 ENST00000430853.1 chr22:28315364-28389280 4 560 73350 exonic -3.60 0 0,1,1 1 0,0,0 103.392857142857 16.7064212678937 65.736 128.482142857143 17.714778459441 84.637 139.607142857143 31.1710838445808 92.661 0 0 chimp,cow,dog,elephant,guinea_pig,human,macaque,marmoset,orangutan,pig,rabbit,rat, lincRNA processed_transcript A549@3.35796,AG04450@4.4026,BJ@1.71514,GM12878@3.22148,H1HESC@5.11439,HELAS3@7.82267,HEPG2@4.21391,HMEC@0.907342,HSMM@2.46983,HUVEC@2.19778,K562@10.7362,MCF7@2.90584,NHEK@1.49076,NHLF@2.22228,SKNSHRA@4.61474, 0 0 0 0 ENSG00000235954.2 ENST00000424161.1 chr22:28315380-28393619 3 553 77682 intronic -0.89 0 0,1,1 1 0,0,0 0 18.3043819675086 65.736 7.88426763110308 19.5281403671378 81.744 10.3273056057866 32.7309930228367 92.131 0 0 cat,chimp,guinea_pig,human,macaque,marmoset,orangutan,rabbit, lincRNA processed_transcript A549@3.35796,AG04450@4.4026,BJ@1.71514,GM12878@3.22148,H1HESC@5.11439,HELAS3@7.82267,HEPG2@4.21391,HMEC@0.907342,HSMM@2.46983,HUVEC@2.19778,K562@10.7362,MCF7@2.90584,NHEK@1.49076,NHLF@2.22228,SKNSHRA@4.61474, 0 0 0 0 ENSG00000235954.2 ENST00000419253.1 chr22:28315389-28382380 2 844 66145 intronic 1.30 1 1,1,1 1 0,0,0 0 16.064494670799 65.736 5.16587677725119 17.259762642679 81.744 6.76658767772512 32.3608738377806 92.131 0 0 chimp,guinea_pig,human,macaque,marmoset,orangutan, lincRNA processed_transcript A549@3.35796,AG04450@4.4026,BJ@1.71514,GM12878@3.22148,H1HESC@5.11439,HELAS3@7.82267,HEPG2@4.21391,HMEC@0.907342,HSMM@2.46983,HUVEC@2.19778,K562@10.7362,MCF7@2.90584,NHEK@1.49076,NHLF@2.22228,SKNSHRA@4.61474, 0 0 0 0 ENSG00000235954.2 ENST00000454741.1 chr22:28315409-28398667 5 5059 78191 exonic 16.47 1 1,1,1 1 0,0,0 24.7916584305199 20.1132099602256 65.736 45.1340185807472 21.6141627553043 83.274 47.8098438426567 34.9074701692011 93.721 0 0 chimp,human,macaque,orangutan, lincRNA processed_transcript A549@3.35796,AG04450@4.4026,BJ@1.71514,GM12878@3.22148,H1HESC@5.11439,HELAS3@7.82267,HEPG2@4.21391,HMEC@0.907342,HSMM@2.46983,HUVEC@2.19778,K562@10.7362,MCF7@2.90584,NHEK@1.49076,NHLF@2.22228,SKNSHRA@4.61474, 0 0 0 0 ENSG00000235954.2 ENST00000453632.1 chr22:28315417-28393763 3 559 77783 intronic -0.89 0 0,1,0 1 0,0,0 0 18.2806140159161 65.736 5.06261180679785 19.5027833845442 83.274 7.37209302325581 32.6884923440855 93.721 0 0 chimp,human,macaque,orangutan, lincRNA processed_transcript A549@3.35796,AG04450@4.4026,BJ@1.71514,GM12878@3.22148,H1HESC@5.11439,HELAS3@7.82267,HEPG2@4.21391,HMEC@0.907342,HSMM@2.46983,HUVEC@2.19778,K562@10.7362,MCF7@2.90584,NHEK@1.49076,NHLF@2.22228,SKNSHRA@4.61474, 0 0 0 0 ENSG00000235954.2 ENST00000436996.1 chr22:28315425-28318558 2 660 2471 intronic -0.85 0 0,1,1 1 0,0,0 0 0 65.736 4.28787878787879 0 83.274 6.24393939393939 0 93.721 0 0 cat,chimp,cow,dog,elephant,horse,human,macaque,marmoset,orangutan,panda,pig, lincRNA retained_intron A549@3.35796,AG04450@4.4026,BJ@1.71514,GM12878@3.22148,H1HESC@5.11439,HELAS3@7.82267,HEPG2@4.21391,HMEC@0.907342,HSMM@2.46983,HUVEC@2.19778,K562@10.7362,MCF7@2.90584,NHEK@1.49076,NHLF@2.22228,SKNSHRA@4.61474, 0 0 0 0 ENSG00000235954.2 ENST00000454996.1 chr22:28315428-28382330 3 834 66064 intronic 1.30 1 1,1,1 1 0,0,0 0 16.0841910874304 65.736 3.39328537170264 17.2809245580043 83.274 4.94124700239808 32.400550980867 93.721 0 0 chimp,guinea_pig,human,macaque,marmoset,orangutan, lincRNA processed_transcript A549@3.35796,AG04450@4.4026,BJ@1.71514,GM12878@3.22148,H1HESC@5.11439,HELAS3@7.82267,HEPG2@4.21391,HMEC@0.907342,HSMM@2.46983,HUVEC@2.19778,K562@10.7362,MCF7@2.90584,NHEK@1.49076,NHLF@2.22228,SKNSHRA@4.61474, 0 0 0 0 ENSG00000235954.2 ENST00000428818.1 chr22:28315445-28320951 2 704 4800 intronic -2.89 1 1,1,1 1 0,0,0 0 0 65.736 0 0.547916666666667 86.104 0 0.566666666666667 97.842 0 0 chimp,human,macaque,marmoset,orangutan, lincRNA processed_transcript A549@3.35796,AG04450@4.4026,BJ@1.71514,GM12878@3.22148,H1HESC@5.11439,HELAS3@7.82267,HEPG2@4.21391,HMEC@0.907342,HSMM@2.46983,HUVEC@2.19778,K562@10.7362,MCF7@2.90584,NHEK@1.49076,NHLF@2.22228,SKNSHRA@4.61474, 0 0 0 0 ENSG00000235954.2 ENST00000435348.1 chr22:28315445-28393655 4 574 77630 intronic -0.89 0 0,1,1 1 0,0,0 0 18.3166430503671 65.736 0 19.5412211773799 86.104 0 32.7529176864614 97.842 0 0 chimp,human,macaque,marmoset,orangutan, lincRNA processed_transcript A549@3.35796,AG04450@4.4026,BJ@1.71514,GM12878@3.22148,H1HESC@5.11439,HELAS3@7.82267,HEPG2@4.21391,HMEC@0.907342,HSMM@2.46983,HUVEC@2.19778,K562@10.7362,MCF7@2.90584,NHEK@1.49076,NHLF@2.22228,SKNSHRA@4.61474, 0 0 0 0 ENSG00000235954.2 ENST00000434221.1 chr22:28315445-28393688 4 968 77269 exonic 8.68 0 0,1,0 1 0,0,0 100.915289256198 17.1379854792996 65.736 114.492768595041 18.198190736259 86.104 118.75 31.41827899934 97.842 0 0 chimp,cow,dog,elephant,horse,human,macaque,marmoset,orangutan,pig,rabbit, lincRNA processed_transcript A549@3.35796,AG04450@4.4026,BJ@1.71514,GM12878@3.22148,H1HESC@5.11439,HELAS3@7.82267,HEPG2@4.21391,HMEC@0.907342,HSMM@2.46983,HUVEC@2.19778,K562@10.7362,MCF7@2.90584,NHEK@1.49076,NHLF@2.22228,SKNSHRA@4.61474, 0 0 0 0 ENSG00000235954.2 ENST00000437713.1 chr22:28315458-28320951 3 851 4638 intronic -2.89 1 1,1,1 1 0,0,0 0 0 65.736 0 0.567054764984907 86.104 0 0.586459680896938 97.842 0 0 cat,chimp,human,macaque,marmoset,orangutan,pig, lincRNA processed_transcript A549@3.35796,AG04450@4.4026,BJ@1.71514,GM12878@3.22148,H1HESC@5.11439,HELAS3@7.82267,HEPG2@4.21391,HMEC@0.907342,HSMM@2.46983,HUVEC@2.19778,K562@10.7362,MCF7@2.90584,NHEK@1.49076,NHLF@2.22228,SKNSHRA@4.61474, 0 0 0 0 ENSG00000235954.2 ENST00000428858.1 chr22:28315460-28318075 2 563 2050 exonic 5.61 0 1,1,1 1 0,0,0 0 0 65.736 0 0 86.104 0 0 97.842 0 0 chimp,cow,human,macaque,marmoset,orangutan,panda,pig,rabbit, lincRNA retained_intron A549@3.35796,AG04450@4.4026,BJ@1.71514,GM12878@3.22148,H1HESC@5.11439,HELAS3@7.82267,HEPG2@4.21391,HMEC@0.907342,HSMM@2.46983,HUVEC@2.19778,K562@10.7362,MCF7@2.90584,NHEK@1.49076,NHLF@2.22228,SKNSHRA@4.61474, 0 0 0 0 ENSG00000235954.2 ENST00000417381.1 chr22:28315472-28318251 3 549 2226 exonic 5.61 0 1,1,1 1 0,0,0 0 0 65.736 0 0 86.104 0 0 97.842 0 0 cat,chimp,horse,human,macaque,marmoset,orangutan, lincRNA processed_transcript A549@3.35796,AG04450@4.4026,BJ@1.71514,GM12878@3.22148,H1HESC@5.11439,HELAS3@7.82267,HEPG2@4.21391,HMEC@0.907342,HSMM@2.46983,HUVEC@2.19778,K562@10.7362,MCF7@2.90584,NHEK@1.49076,NHLF@2.22228,SKNSHRA@4.61474, 0 0 0 0 ENSG00000235954.2 ENST00000430525.1 chr22:28315472-28389493 3 521 73496 exonic -0.03 0 0,1,1 1 0,0,0 175.151631477927 17.3898443452705 65.736 198.934740882917 18.5271579405682 86.104 203.927063339731 31.9756993577882 97.842 0 0 cat,chimp,cow,dog,elephant,guinea_pig,horse,human,macaque,marmoset,mouse,orangutan,pig,rat, lincRNA processed_transcript A549@3.35796,AG04450@4.4026,BJ@1.71514,GM12878@3.22148,H1HESC@5.11439,HELAS3@7.82267,HEPG2@4.21391,HMEC@0.907342,HSMM@2.46983,HUVEC@2.19778,K562@10.7362,MCF7@2.90584,NHEK@1.49076,NHLF@2.22228,SKNSHRA@4.61474, 0 0 0 0 ENSG00000235954.2 ENST00000452612.1 chr22:28315479-28395464 5 741 79236 exonic 16.47 0 0,1,0 1 0,0,0 80.7624831309042 20.1159952546822 65.736 117.554655870445 21.6779115553536 86.104 127.353576248313 34.8419531526074 97.842 0 0 chimp,dog,horse,human,macaque,mouse,orangutan,rat, lincRNA processed_transcript A549@3.35796,AG04450@4.4026,BJ@1.71514,GM12878@3.22148,H1HESC@5.11439,HELAS3@7.82267,HEPG2@4.21391,HMEC@0.907342,HSMM@2.46983,HUVEC@2.19778,K562@10.7362,MCF7@2.90584,NHEK@1.49076,NHLF@2.22228,SKNSHRA@4.61474, 0 0 0 0 ENSG00000235954.2 ENST00000425112.1 chr22:28315506-28382217 4 803 65902 intronic 1.30 0 0,1,0 1 0,0,0 0 16.1237291736214 65.736 0 17.3234044490304 86.104 0 32.4801978695639 97.842 0 0 cat,chimp,dog,elephant,guinea_pig,horse,human,macaque,marmoset,orangutan, lincRNA processed_transcript A549@3.35796,AG04450@4.4026,BJ@1.71514,GM12878@3.22148,H1HESC@5.11439,HELAS3@7.82267,HEPG2@4.21391,HMEC@0.907342,HSMM@2.46983,HUVEC@2.19778,K562@10.7362,MCF7@2.90584,NHEK@1.49076,NHLF@2.22228,SKNSHRA@4.61474, 0 0 0 0 ENSG00000235954.2 ENST00000417497.1 chr22:28331149-28395645 3 624 63868 intronic -0.89 0 0,0,1 0 0,0,0 0 25.9047880002505 0 0 28.2318062253397 0 0 44.6742969875368 0 0 0 chimp,horse,human,macaque,orangutan, lincRNA processed_transcript A549@3.35796,AG04450@4.4026,BJ@1.71514,GM12878@3.22148,H1HESC@5.11439,HELAS3@7.82267,HEPG2@4.21391,HMEC@0.907342,HSMM@2.46983,HUVEC@2.19778,K562@10.7362,MCF7@2.90584,NHEK@1.49076,NHLF@2.22228,SKNSHRA@4.61474, 0 0 0 0 ENSG00000235954.2 ENST00000428584.1 chr22:28388457-28404569 5 5854 10250 exonic 8.79 0 0,0,0 0 0,0,0 36.6908097027673 27.1919024390244 0 43.8085070037581 34.1682926829268 0 47.822172873249 39.7664390243903 0 0 0 chimp,human,macaque,orangutan, lincRNA processed_transcript A549@3.35796,AG04450@4.4026,BJ@1.71514,GM12878@3.22148,H1HESC@5.11439,HELAS3@7.82267,HEPG2@4.21391,HMEC@0.907342,HSMM@2.46983,HUVEC@2.19778,K562@10.7362,MCF7@2.90584,NHEK@1.49076,NHLF@2.22228,SKNSHRA@4.61474, 0 0 0 0 ENSG00000235954.2 ENST00000540665.1 chr22:28388916-28393411 3 799 3692 exonic 8.68 0 0,0,0 0 0,0,0 122.260325406758 12.5002708559047 20.51 138.709637046308 12.0487540628386 36.335 143.86733416771 21.011105092091 43.893 0 0 cat,chimp,dog,elephant,guinea_pig,horse,human,macaque,marmoset,mouse,orangutan, lincRNA processed_transcript A549@3.35796,AG04450@4.4026,BJ@1.71514,GM12878@3.22148,H1HESC@5.11439,HELAS3@7.82267,HEPG2@4.21391,HMEC@0.907342,HSMM@2.46983,HUVEC@2.19778,K562@10.7362,MCF7@2.90584,NHEK@1.49076,NHLF@2.22228,SKNSHRA@4.61474, 0 0 0 0 ENSG00000235954.2 ENST00000433317.1 chr22:28389101-28396711 5 3075 4527 exonic 16.47 0 0,1,0 0 0,0,0 58.239674796748 43.4950298210736 20.51 74.8617886178862 48.0521316545173 36.335 79.7993495934959 58.4082173624917 43.893 0 0 chimp,horse,human,macaque,orangutan,pig, lincRNA processed_transcript A549@3.35796,AG04450@4.4026,BJ@1.71514,GM12878@3.22148,H1HESC@5.11439,HELAS3@7.82267,HEPG2@4.21391,HMEC@0.907342,HSMM@2.46983,HUVEC@2.19778,K562@10.7362,MCF7@2.90584,NHEK@1.49076,NHLF@2.22228,SKNSHRA@4.61474, 0 0 0 0 ENSG00000235954.2 ENST00000426594.1 chr22:28393565-28394770 3 506 695 exonic 2.07 0 0,0,0 0 0,0,0 72.4525691699605 30.5597122302158 0 111.169960474308 39.7669064748201 0 137.733201581028 45.0172661870504 0 0 0 chimp,elephant,horse,human,macaque,orangutan,pig, lincRNA processed_transcript A549@3.35796,AG04450@4.4026,BJ@1.71514,GM12878@3.22148,H1HESC@5.11439,HELAS3@7.82267,HEPG2@4.21391,HMEC@0.907342,HSMM@2.46983,HUVEC@2.19778,K562@10.7362,MCF7@2.90584,NHEK@1.49076,NHLF@2.22228,SKNSHRA@4.61474, 0 0 0 0 ENSG00000226471.1 ENST00000458080.1 chr22:29196671-29244547 4 501 47369 intergenic 3.62 0 1,1,1 1 0,0,0 0 4.85171736789884 49.266 6.31536926147705 3.79803246849205 101.787 7.0059880239521 6.37972091452216 119.757 0 0 chimp,human,macaque,marmoset,orangutan, antisense antisense A549@0.197044,AG04450@0.168686,BJ@0.248472,GM12878@0.262163,H1HESC@0.191355,HELAS3@0.309992,HEPG2@0.309339,HMEC@0.016216,HSMM@0.0294,HUVEC@0.029967,K562@0.385295,MCF7@0.652784,NHEK@0.169825,NHLF@0.0605695,SKNSHRA@0.174521, 0 0 0 0 ENSG00000226471.1 ENST00000418292.1 chr22:29196692-29235021 2 206 38121 intergenic -12.86 0 0,1,1 1 0,0,0 0 4.12636079851001 49.266 4.64077669902913 4.7194197423992 103.995 6.74757281553398 7.76167991395819 121.877 0 0 cat,chimp,horse,human,macaque,orangutan,pig, antisense antisense A549@0.197044,AG04450@0.168686,BJ@0.248472,GM12878@0.262163,H1HESC@0.191355,HELAS3@0.309992,HEPG2@0.309339,HMEC@0.016216,HSMM@0.0294,HUVEC@0.029967,K562@0.385295,MCF7@0.652784,NHEK@0.169825,NHLF@0.0605695,SKNSHRA@0.174521, 0 0 0 0 ENSG00000226471.1 ENST00000451486.1 chr22:29197880-29218203 2 345 19976 intergenic 2.44 1 0,0,1 0 0,0,0 0 6.17120544653584 0 0 4.68477172607129 0 0 7.29945935122147 0 0 0 chimp,human,macaque,marmoset,orangutan, antisense antisense A549@0.197044,AG04450@0.168686,BJ@0.248472,GM12878@0.262163,H1HESC@0.191355,HELAS3@0.309992,HEPG2@0.309339,HMEC@0.016216,HSMM@0.0294,HUVEC@0.029967,K562@0.385295,MCF7@0.652784,NHEK@0.169825,NHLF@0.0605695,SKNSHRA@0.174521, 0 0 0 0 ENSG00000226471.1 ENST00000422972.1 chr22:29214319-29218203 2 407 3475 intergenic 2.82 1 1,1,1 0 0,0,0 0 24.2880575539568 0 0 9.74474820143885 9.736 0 12.6040287769784 9.904 0 0 chimp,horse,human,macaque,orangutan, antisense antisense A549@0.197044,AG04450@0.168686,BJ@0.248472,GM12878@0.262163,H1HESC@0.191355,HELAS3@0.309992,HEPG2@0.309339,HMEC@0.016216,HSMM@0.0294,HUVEC@0.029967,K562@0.385295,MCF7@0.652784,NHEK@0.169825,NHLF@0.0605695,SKNSHRA@0.174521, 0 0 0 0 ENSG00000235786.1 ENST00000412798.1 chr22:29388709-29414608 2 672 25225 intronic -0.96 0 0,1,0 0 0,0,0 0 39.5276511397423 0 0 38.060574826561 2.805 1.7485119047619 39.9145292368682 2.915 0 0 chimp,dog,human,macaque,marmoset,orangutan,panda, sense_intronic sense_intronic A549@0.028275,AG04450@0.003682,BJ@0,GM12878@0.021211,H1HESC@0.014853,HELAS3@0.019094,HEPG2@0.0713035,HMEC@0,HSMM@0,HUVEC@0.0168085,K562@0.026497,MCF7@0.0231725,NHEK@0.01028,NHLF@0,SKNSHRA@0.048143, 0 0 0 0 ENSG00000177993.3 ENST00000325660.3 chr22:29420987-29427464 3 2167 4306 intronic 1.26 0 0,1,0 0 0,0,0 19.1808952468851 105.539247561542 105.165 20.2916474388556 73.6922898281468 59.74 23.3281033687125 77.0903390617743 51.567 0 0 chimp,human,orangutan, lincRNA processed_transcript A549@0.01269,AG04450@0.016239,BJ@0.023574,GM12878@0.001858,H1HESC@0.0054215,HELAS3@0.0042365,HEPG2@0.013049,HMEC@0.001887,HSMM@0.026522,HUVEC@0.008425,K562@0.0333555,MCF7@0,NHEK@0.001214,NHLF@0.009831,SKNSHRA@0.014645, 0 0 0 0 ENSG00000226772.1 ENST00000456740.1 chr22:29495029-29507671 2 537 12103 intronic -3.62 0 0,0,1 0 0,0,0 0 25.4805420143766 12.144 5.79702048417132 36.4503842022639 16.052 5.91992551210428 39.2174667437825 16.44 0 0 cat,chimp,dog,elephant,guinea_pig,horse,human,macaque,orangutan,panda,pig,rabbit, antisense antisense A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0.004967,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000237015.1 ENST00000433125.1 chr22:29656878-29658026 2 383 763 intronic -2.10 0 1,1,1 0 0,0,0 0 0 57.756 8.06788511749347 0 122.501 9.65013054830287 0 138.826 0 0 chimp,guinea_pig,horse,human,macaque,marmoset,orangutan,panda, antisense antisense A549@0,AG04450@0.0183515,BJ@0,GM12878@2.0485,H1HESC@0.367094,HELAS3@0,HEPG2@0.0279045,HMEC@0,HSMM@0.0053445,HUVEC@0.0231895,K562@0.061358,MCF7@0.0899585,NHEK@0,NHLF@0,SKNSHRA@0.101624, 0 0 0 0 ENSG00000225465.4 ENST00000461286.1 chr22:29833006-29838118 1 5112 0 exonic 10.36 0 0,0,0 0 0,0,0 0 0 0 0 0 0 23.0757042253521 0 9.963 0 0 human,orangutan, antisense antisense A549@0.0711475,AG04450@0.071592,BJ@0.106383,GM12878@0.009968,H1HESC@0.278929,HELAS3@0.000457,HEPG2@0.0012765,HMEC@0.406424,HSMM@0.499532,HUVEC@0.0641855,K562@0.270706,MCF7@0.0063715,NHEK@0.00126533,NHLF@0.0599125,SKNSHRA@1.6245, 0 0 0 0 ENSG00000225465.4 ENST00000539579.1 chr22:29837244-29837827 1 583 0 exonic 10.36 0 0,0,1 0 0,0,0 0 0 0 0 0 0 52.4648370497427 0 28.233 0 0 cat,chimp,cow,dog,elephant,guinea_pig,horse,human,macaque,marmoset,mouse,opossum,orangutan,panda,pig,platypus,rabbit,rat, antisense antisense A549@0.0711475,AG04450@0.071592,BJ@0.106383,GM12878@0.009968,H1HESC@0.278929,HELAS3@0.000457,HEPG2@0.0012765,HMEC@0.406424,HSMM@0.499532,HUVEC@0.0641855,K562@0.270706,MCF7@0.0063715,NHEK@0.00126533,NHLF@0.0599125,SKNSHRA@1.6245, 0 0 0 0 ENSG00000224381.1 ENST00000419368.1 chr22:29867930-29874059 2 568 5559 intergenic -3.22 0 0,1,0 0 0,0,0 0 0 33.695 1.49471830985915 5.48551897823349 45.646 2.5 6.39233675121425 42.181 0 0 chimp,elephant,human,marmoset,orangutan, antisense antisense A549@0.06005,AG04450@0.0543565,BJ@0.071187,GM12878@0,H1HESC@0.177605,HELAS3@0,HEPG2@0,HMEC@0.035918,HSMM@0.0508215,HUVEC@0.126036,K562@0.685452,MCF7@0.003607,NHEK@0.0273423,NHLF@0.023962,SKNSHRA@0.322552, 0 0 0 0 ENSG00000234208.1 ENST00000411969.1 chr22:29909878-29931379 2 287 21212 intronic -15.04 0 0,0,0 0 0,0,0 0 19.5609089194795 0 0 31.2328399019423 8.29 0 31.257260041486 11.275 0 0 cat,chimp,horse,human,macaque,orangutan,panda, processed_transcript processed_transcript A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000232396.2 ENST00000416352.1 chr22:30101245-30115848 3 587 14012 intergenic -10.06 0 0,0,1 0 0,0,0 31.5093696763203 13.6530830716529 95.807 26.7427597955707 36.8010990579503 316.651 32.1362862010221 35.7861832714816 353.526 0 0 cat,chimp,dog,guinea_pig,horse,human,macaque,marmoset,mouse,orangutan,panda, antisense antisense A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0.011827, 0 0 0 0 ENSG00000232396.2 ENST00000451180.1 chr22:30107802-30115737 2 382 7551 intergenic 0.98 0 0,0,1 0 0,0,0 48.4188481675393 17.4598066481261 95.807 41.0942408376963 42.5919745729043 277.742 49.3821989528796 41.5334392795656 325.99 0 0 chimp,guinea_pig,horse,human,macaque,marmoset,orangutan,panda, antisense antisense A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0.011827, 0 0 0 0 ENSG00000239446.1 ENST00000420180.1 chr22:30107809-30115703 2 242 7650 intergenic 0.98 0 0,0,1 0 0,0,0 64.0661157024793 17.5894117647059 95.807 57.6363636363636 42.2237908496732 274.193 70.6157024793388 41.181568627451 325.739 0 0 chimp,guinea_pig,horse,human,macaque,marmoset,orangutan,panda,rat, antisense antisense A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000227117.1 ENST00000429350.1 chr22:30404731-30476219 5 897 70583 exonic 3.27 0 1,1,1 1 0,0,0 148.149386845039 28.0182763554964 0 111.725752508361 29.6791153677231 9.539 110.811594202899 36.4612158735106 11.061 0 0 cat,chimp,guinea_pig,horse,human,macaque,marmoset,mouse,opossum,orangutan,panda,pig,rabbit, processed_transcript processed_transcript A549@0,AG04450@0.004438,BJ@0,GM12878@0,H1HESC@0.413309,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0.0022795,NHEK@0,NHLF@0.009175,SKNSHRA@0, 0 0 0 0 ENSG00000227117.1 ENST00000453743.1 chr22:30414621-30476469 3 576 61268 exonic 2.34 0 0,1,0 0 0,0,0 0 25.3802800809558 0 16.5607638888889 26.6120487040543 16.517 23.421875 33.7851080498792 23.84 0 0 chimp,cow,dog,elephant,guinea_pig,horse,human,macaque,marmoset,orangutan,panda,pig, processed_transcript processed_transcript A549@0,AG04450@0.004438,BJ@0,GM12878@0,H1HESC@0.413309,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0.0022795,NHEK@0,NHLF@0.009175,SKNSHRA@0, 0 0 0 0 ENSG00000227117.1 ENST00000432568.1 chr22:30443614-30476427 3 724 32085 exonic 5.49 0 0,1,0 0 0,0,0 0 5.47333645005454 0 13.1754143646409 5.47065606981455 7.688 21.9903314917127 6.05404394576905 14.66 0 0 chimp,dog,elephant,horse,human,macaque,orangutan, processed_transcript processed_transcript A549@0,AG04450@0.004438,BJ@0,GM12878@0,H1HESC@0.413309,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0.0022795,NHEK@0,NHLF@0.009175,SKNSHRA@0, 0 0 0 0 ENSG00000225676.1 ENST00000432360.1 chr22:30580633-30603098 3 295 22166 exonic -1.08 0 0,1,1 0 0,0,0 0 62.1060182261121 28.764 58.935593220339 43.1702607597221 52.962 46.1762711864407 42.4658485969503 57.401 0 0 cat,chimp,cow,horse,human,macaque,marmoset,orangutan,panda,pig,rabbit, antisense antisense A549@0.070372,AG04450@0.074549,BJ@0.0081205,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0.064347,HMEC@0,HSMM@0.133222,HUVEC@0.008159,K562@0,MCF7@0.0479905,NHEK@0,NHLF@0,SKNSHRA@0.055988, 0 0 0 0 ENSG00000232530.1 ENST00000447565.1 chr22:30635183-30636527 3 805 535 exonic -4.29 1 0,0,1 0 0,0,0 46.7925465838509 0 0 54.2683229813665 0 1.785 46.9428571428571 0 1.855 0 0 human,macaque,marmoset,orangutan, antisense antisense A549@0.0167585,AG04450@0.003374,BJ@0,GM12878@0,H1HESC@0.0026645,HELAS3@0,HEPG2@0,HMEC@0.006474,HSMM@0.0466505,HUVEC@0,K562@0,MCF7@0.0028765,NHEK@0,NHLF@0.114896,SKNSHRA@0.0217475, 0 0 0 0 ENSG00000181123.3 ENST00000442126.1 chr22:30887789-30888791 2 500 500 exonic 6.37 0 0,0,0 0 0,0,0 75.248 84.25 40.349 132.792 96.292 53.186 197.684 118.53 70.163 0 0 cat,chimp,cow,dog,elephant,guinea_pig,horse,human,macaque,marmoset,mouse,orangutan,panda,pig,rabbit,rat, antisense antisense A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0.0069745,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000223831.1 ENST00000432130.1 chr22:30994296-31002674 3 246 8128 intronic 0 0 0,0,1 0 0,0,0 0 0 0 0 0.265748031496063 0 0 0.581446850393701 0 0 0 chimp,human,macaque,marmoset,orangutan, sense_intronic sense_intronic A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000235989.2 ENST00000432624.2 chr22:31318295-31322537 2 2028 2212 intergenic 3.53 1 1,1,1 0 0,0,0 16.8491124260355 0 0 11.7603550295858 2.24593128390597 0 12.853550295858 2.35171790235081 0 0 0 chimp,cow,elephant,horse,human,macaque,marmoset,orangutan,panda,pig, antisense antisense A549@0.004146,AG04450@0.021328,BJ@0.0480555,GM12878@0.204626,H1HESC@0.006733,HELAS3@0.0088635,HEPG2@0,HMEC@0,HSMM@0.0312385,HUVEC@0.050299,K562@0,MCF7@0.0284445,NHEK@0,NHLF@0.0517405,SKNSHRA@0.01529, 0 0 0 0 ENSG00000235989.2 ENST00000422995.1 chr22:31318332-31322537 3 2167 2034 intergenic 3.76 1 1,1,1 0 0,0,0 15.7683433317951 0 0 9.91370558375634 2.44247787610619 2.367 10.9284725426857 2.55752212389381 2.385 0 0 chimp,cow,elephant,horse,human,macaque,marmoset,orangutan,panda,pig, antisense antisense A549@0.004146,AG04450@0.021328,BJ@0.0480555,GM12878@0.204626,H1HESC@0.006733,HELAS3@0.0088635,HEPG2@0,HMEC@0,HSMM@0.0312385,HUVEC@0.050299,K562@0,MCF7@0.0284445,NHEK@0,NHLF@0.0517405,SKNSHRA@0.01529, 0 0 0 0 ENSG00000235989.2 ENST00000441558.1 chr22:31318436-31328436 3 422 9574 exonic -1.63 0 0,1,1 0 0,0,0 89.1706161137441 19.3836432003342 0 131.938388625592 25.8561729684562 2.367 120.473933649289 26.5747858784207 2.385 0 0 chimp,elephant,guinea_pig,horse,human,macaque,marmoset,mouse,orangutan, antisense antisense A549@0.004146,AG04450@0.021328,BJ@0.0480555,GM12878@0.204626,H1HESC@0.006733,HELAS3@0.0088635,HEPG2@0,HMEC@0,HSMM@0.0312385,HUVEC@0.050299,K562@0,MCF7@0.0284445,NHEK@0,NHLF@0.0517405,SKNSHRA@0.01529, 0 0 0 0 ENSG00000253352.2 ENST00000521091.1 chr22:31365643-31374831 3 6474 2710 intergenic 5.08 0 0,1,1 0 0,1,0 199.389712696942 46.9321033210332 380.768 193.533982082175 61.7225092250923 466.247 192.497374111832 64.3881918819188 473.07 1 1 chimp,human,macaque,marmoset,orangutan, lincRNA non_coding A549@23.1262,AG04450@29.7987,BJ@22.7172,GM12878@25.3787,H1HESC@36.9279,HELAS3@47.1559,HEPG2@30.1481,HMEC@17.0944,HSMM@25.0701,HUVEC@21.1988,K562@32.1793,MCF7@47.1781,NHEK@21.4484,NHLF@24.1689,SKNSHRA@36.3513, 0 0 0 0 ENSG00000253352.2 ENST00000540687.1 chr22:31366663-31372049 3 2741 2641 intergenic 5.08 0 0,0,1 0 0,1,0 301.596862458957 32.5346459674366 366.356 292.794600510762 50.6035592578569 287.801 286.934695366654 53.6175691026126 270.05 0 0 cat,chimp,cow,dog,guinea_pig,horse,human,macaque,marmoset,mouse,orangutan,panda,pig,rabbit,rat, lincRNA non_coding A549@23.1262,AG04450@29.7987,BJ@22.7172,GM12878@25.3787,H1HESC@36.9279,HELAS3@47.1559,HEPG2@30.1481,HMEC@17.0944,HSMM@25.0701,HUVEC@21.1988,K562@32.1793,MCF7@47.1781,NHEK@21.4484,NHLF@24.1689,SKNSHRA@36.3513, 0 0 0 0 ENSG00000253352.2 ENST00000519077.1 chr22:31367353-31374831 4 4888 2584 intergenic 5.08 0 0,0,1 0 0,1,0 137.940466448445 49.2205882352941 328.605 143.369271685761 64.2387770897833 301.532 147.575695581015 65.078560371517 299.611 1 1 chimp,human,macaque,marmoset,orangutan, lincRNA non_coding A549@23.1262,AG04450@29.7987,BJ@22.7172,GM12878@25.3787,H1HESC@36.9279,HELAS3@47.1559,HEPG2@30.1481,HMEC@17.0944,HSMM@25.0701,HUVEC@21.1988,K562@32.1793,MCF7@47.1781,NHEK@21.4484,NHLF@24.1689,SKNSHRA@36.3513, 0 0 0 0 ENSG00000254835.1 ENST00000526089.1 chr22:31601250-31601602 1 352 0 exonic 0.20 0 0,1,1 0 0,0,0 0 0 23.221 23.0965909090909 0 18.843 7.84375 0 21.455 0 0 cat,chimp,cow,dog,elephant,guinea_pig,horse,human,macaque,marmoset,mouse,orangutan,panda,pig,rabbit,rat, antisense antisense A549@0,AG04450@0.0193705,BJ@0,GM12878@0.00664,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0.0198795,NHEK@0,NHLF@0.010932,SKNSHRA@0.012866, 0 0 0 0 ENSG00000228839.1 ENST00000440456.1 chr22:31688485-31734007 2 552 44968 exonic -7.43 0 0,0,1 0 0,0,0 51.1739130434783 32.2611412560043 95.916 112.534420289855 35.5536159046433 126.722 91.5380434782609 34.9826320939335 144.412 0 0 cat,cow,dog,human,marmoset,orangutan,panda,rabbit, antisense antisense A549@0,AG04450@0.0650585,BJ@0.043256,GM12878@0.127289,H1HESC@0,HELAS3@0.112993,HEPG2@0.048556,HMEC@0,HSMM@0.0041145,HUVEC@0.0662955,K562@0.22787,MCF7@0.12952,NHEK@0.0533947,NHLF@0.050347,SKNSHRA@0.114804, 0 0 0 0 ENSG00000228839.1 ENST00000451161.1 chr22:31731335-31734007 2 420 2250 intronic -4.37 0 0,0,1 0 0,0,0 0 60.5026666666667 9.66 15.7142857142857 60.2528888888889 5.18 8.82857142857143 63.8622222222222 4.662 0 0 cat,chimp,cow,dog,guinea_pig,human,macaque,marmoset,orangutan, antisense antisense A549@0,AG04450@0.0650585,BJ@0.043256,GM12878@0.127289,H1HESC@0,HELAS3@0.112993,HEPG2@0.048556,HMEC@0,HSMM@0.0041145,HUVEC@0.0662955,K562@0.22787,MCF7@0.12952,NHEK@0.0533947,NHLF@0.050347,SKNSHRA@0.114804, 0 0 0 0 ENSG00000240591.1 ENST00000464523.1 chr22:31850237-31860042 2 498 9305 exonic 0.09 0 0,1,0 0 0,0,0 375.694779116466 47.9415368081677 71.965 442.325301204819 53.8682428801719 65.925 353.471887550201 69.8300913487373 59.054 0 0 cat,chimp,human,marmoset,mouse,orangutan,pig,rat, antisense antisense A549@0,AG04450@0.006405,BJ@0.018031,GM12878@0.05126,H1HESC@0.0063985,HELAS3@0.0136715,HEPG2@0.026791,HMEC@0.028456,HSMM@0.009476,HUVEC@0.0288175,K562@0.016645,MCF7@0.01302,NHEK@0.017251,NHLF@0.0094475,SKNSHRA@0.0200685, 0 0 0 0 ENSG00000224623.1 ENST00000439588.1 chr22:31857650-31860190 2 613 1925 exonic -5.36 1 0,0,1 0 0,0,0 196.502446982055 74.8966233766234 0 216.603588907015 95.4212987012987 0 183.535073409462 157.277922077922 0 0 0 cat,chimp,dog,elephant,guinea_pig,horse,human,macaque,marmoset,orangutan,panda,pig,rabbit, antisense antisense A549@0.0440625,AG04450@0.0052645,BJ@0,GM12878@0.0940125,H1HESC@0.023168,HELAS3@0.013748,HEPG2@0.0239345,HMEC@0.016863,HSMM@0.0233425,HUVEC@0.020111,K562@0.0245105,MCF7@0.021302,NHEK@0.0105093,NHLF@0.020965,SKNSHRA@0.008951, 0 0 0 0 ENSG00000240591.1 ENST00000483736.1 chr22:31857650-31860190 2 613 1925 exonic -5.36 1 0,0,1 0 0,0,0 196.502446982055 74.8966233766234 0 216.603588907015 95.4212987012987 0 183.535073409462 157.277922077922 0 0 0 cat,chimp,dog,elephant,guinea_pig,horse,human,macaque,marmoset,orangutan,panda,pig,rabbit, antisense antisense A549@0,AG04450@0.006405,BJ@0.018031,GM12878@0.05126,H1HESC@0.0063985,HELAS3@0.0136715,HEPG2@0.026791,HMEC@0.028456,HSMM@0.009476,HUVEC@0.0288175,K562@0.016645,MCF7@0.01302,NHEK@0.017251,NHLF@0.0094475,SKNSHRA@0.0200685, 0 0 0 0 ENSG00000227519.1 ENST00000430449.1 chr22:32359344-32366387 2 471 6570 intergenic 0.48 0 0,0,0 0 0,0,0 0 6.10228310502283 0 13.1082802547771 13.8458143074581 0 13.2229299363057 11.9619482496195 0 0 0 cat,chimp,dog,horse,human,macaque,orangutan,panda,pig, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0.006183,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0.11682,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000230866.1 ENST00000416995.1 chr22:32366810-32369461 2 176 2473 intergenic 0 0 0,1,0 0 0,0,0 0 0 0 0 0 6.174 0 0 6.228 0 0 human,macaque,orangutan, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000230866.1 ENST00000436395.1 chr22:32366848-32369462 3 295 2315 intergenic 0 0 0,1,0 0 0,0,0 0 0 0 0 0 6.174 0 0 6.228 0 0 chimp,human,macaque,orangutan, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000239674.1 ENST00000446078.1 chr22:32528388-32539165 3 315 10458 intergenic 0 0 0,1,1 0 0,0,0 0 0 0 82.1269841269841 4.55230445591891 44.576 225.796825396825 11.2346528973035 162.833 0 0 cat,chimp,dog,elephant,guinea_pig,human,macaque,marmoset,mouse,opossum,orangutan,pig,rabbit,rat, processed_transcript processed_transcript A549@0.008686,AG04450@0,BJ@0,GM12878@0,H1HESC@0.015142,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000239674.1 ENST00000436294.1 chr22:32537254-32539259 2 272 1731 intergenic -8.86 0 0,0,0 0 0,0,0 0 0 0 0 0 0 0 0 0 0 0 cat,chimp,cow,dog,elephant,horse,human,macaque,marmoset,orangutan,panda,pig, processed_transcript processed_transcript A549@0.008686,AG04450@0,BJ@0,GM12878@0,H1HESC@0.015142,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000230120.1 ENST00000426354.1 chr22:32555441-32556379 2 560 376 intergenic -3.93 0 0,0,0 0 0,0,0 0 0 0 0 0 0 0 0 0 0 0 chimp,human,macaque,marmoset,orangutan,panda, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0.007155,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000242082.1 ENST00000434942.1 chr22:32601102-32665653 4 872 63673 encompassing 10.04 0 0,0,0 1 0,0,0 0 1.71455719064596 0 0 9.45606457996325 0 262.634174311927 20.9584596296703 0 0 0 chimp,human,macaque,orangutan,rabbit, processed_transcript processed_transcript A549@0.714951,AG04450@0,BJ@0,GM12878@0.005084,H1HESC@0.930532,HELAS3@0.111097,HEPG2@0.361209,HMEC@0.004674,HSMM@0,HUVEC@0,K562@0.004549,MCF7@0.0404715,NHEK@0.00395367,NHLF@0,SKNSHRA@1.42528, 0 0 0 0 ENSG00000224050.1 ENST00000452181.1 chr22:32669407-32673173 2 588 3176 intergenic -2.79 0 0,0,1 0 0,0,0 0 0 0 0 15.4096347607053 0 0 25.2188287153652 639.03 0 0 cat,chimp,cow,dog,elephant,guinea_pig,horse,human,macaque,marmoset,mouse,orangutan,panda,pig,rabbit, lincRNA lincRNA A549@0.297739,AG04450@0,BJ@0,GM12878@0,H1HESC@0.0540965,HELAS3@0,HEPG2@0.0906655,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0.006815,NHEK@0,NHLF@0,SKNSHRA@0.13228, 0 0 0 0 ENSG00000234626.1 ENST00000446543.1 chr22:32723158-32739092 2 359 15573 intergenic -4.34 1 0,0,0 0 0,0,0 0 0 0 0 1.22327104604123 0 0 65.3181146856739 0 0 0 chimp,horse,human,marmoset,orangutan,pig, antisense antisense A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@2.21448,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0.0125915, 0 0 0 0 ENSG00000230736.2 ENST00000420171.1 chr22:32772651-32780330 3 1555 6120 intergenic 2.08 1 0,1,0 0 0,0,0 0 6 0 0 14.9877450980392 0 4.22250803858521 19.0957516339869 0 0 0 chimp,human,macaque,orangutan, processed_transcript processed_transcript A549@0,AG04450@0.00295,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000241954.1 ENST00000444848.1 chr22:32779773-32781618 2 442 1401 intergenic -6.47 0 0,0,1 0 0,0,0 0 0 0 0 0 0 0 0 0 0 0 chimp,dog,elephant,horse,human,macaque,marmoset,orangutan, antisense antisense A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000236054.1 ENST00000428201.1 chr22:32979286-32980190 2 455 447 intronic -3.57 1 0,0,1 0 0,0,0 0 0 0 0 3.99328859060403 0 0 4.05592841163311 0 0 0 chimp,human,macaque,orangutan, antisense antisense A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0.739281,HEPG2@0.16337,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0.240382,NHEK@0,NHLF@0,SKNSHRA@0, 160 2 0 0 ENSG00000229673.1 ENST00000444982.1 chr22:33179163-33180968 2 145 1658 intronic 0 0 0,0,0 0 0,0,0 0 0 0 0 0 0 0 1.61218335343788 0 0 0 chimp,dog,elephant,horse,human,macaque,marmoset,orangutan,panda, antisense antisense A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000228622.1 ENST00000447396.1 chr22:33501369-33502045 2 435 239 intergenic 1.15 1 0,0,0 0 0,0,0 208.312643678161 76.6359832635983 0 125.12183908046 0 0 127.303448275862 2.46861924686192 0 0 0 cat,chimp,cow,dog,elephant,horse,human,macaque,marmoset,orangutan,panda,rabbit, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0.0192635,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000231253.1 ENST00000452505.1 chr22:33504515-33512280 4 546 7213 intergenic -0.17 0 0,0,0 0 0,0,0 0 10.4443366144461 0 0 7.16470262026896 0 0 7.76195757659781 0 0 0 cat,chimp,dog,horse,human,macaque,marmoset,orangutan, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0.002321,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000232073.1 ENST00000434741.1 chr22:33560049-33562425 2 565 1809 exonic 2.78 0 0,0,0 0 0,0,0 0 0 0 15.1345132743363 0 0 15.8690265486726 0 0 0 0 chimp,cow,elephant,human,rabbit, antisense antisense A549@0,AG04450@0,BJ@0,GM12878@0.004134,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0.003546,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000230741.1 ENST00000453924.1 chr22:33716851-33718799 2 482 1464 intronic 0 0 0,0,0 0 0,0,0 0 0 0 0 22.6523224043716 0 15.9439834024896 34.0484972677596 3.645 0 0 chimp,dog,horse,human,macaque,marmoset,orangutan, antisense antisense A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0.038384,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0.0063425,NHEK@0,NHLF@0.64159,SKNSHRA@0, 0 0 0 0 ENSG00000232081.1 ENST00000445391.1 chr22:34119818-34120898 2 556 522 intronic -4.88 0 0,0,1 0 0,0,0 0 0 0 0 0 0 0 0 0 0 0 chimp,cow,elephant,horse,human,macaque,marmoset,orangutan, sense_intronic sense_intronic A549@0.0521205,AG04450@0.0601815,BJ@0.126934,GM12878@0.339136,H1HESC@1.30632,HELAS3@0.250076,HEPG2@0.385905,HMEC@0,HSMM@0.389892,HUVEC@0.055355,K562@0,MCF7@1.60041,NHEK@0.0677233,NHLF@0,SKNSHRA@0.0027185, 0 0 0 0 ENSG00000224973.1 ENST00000453336.1 chr22:34121000-34133761 6 2049 10702 intronic 1.53 0 0,1,0 0 0,0,0 49.2381649585164 1.98355447579892 0 28.5451439726696 2.48196598766586 0 43.389458272328 4.22089329097365 0 0 0 cat,chimp,elephant,human,macaque,marmoset,rat, antisense antisense A549@0,AG04450@0.001569,BJ@0,GM12878@0,H1HESC@0.001416,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000224973.1 ENST00000424291.1 chr22:34121013-34146830 7 1058 24747 intronic -1.07 0 0,1,0 0 0,0,0 0 10.2661736776175 0 2.13988657844991 7.77063886531701 0 2.23062381852552 10.0208510122439 0 0 0 cat,chimp,human,macaque,marmoset,orangutan, antisense antisense A549@0,AG04450@0.001569,BJ@0,GM12878@0,H1HESC@0.001416,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000224973.1 ENST00000438159.1 chr22:34121026-34146729 10 2608 23077 intronic 3.91 0 0,1,0 0 0,0,0 38.6844325153374 6.63725787580708 0 23.2948619631902 5.79845733847554 0 34.9942484662577 6.89348702170993 0 0 0 chimp,elephant,human,macaque,marmoset, antisense antisense A549@0,AG04450@0.001569,BJ@0,GM12878@0,H1HESC@0.001416,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000224973.1 ENST00000448275.1 chr22:34121055-34128488 4 563 6864 intronic -5.00 0 0,1,0 0 0,0,0 0 3.09265734265734 0 0 3.86975524475524 0 0 6.58100233100233 0 0 0 chimp,human,macaque,marmoset,orangutan, antisense antisense A549@0,AG04450@0.001569,BJ@0,GM12878@0,H1HESC@0.001416,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000224973.1 ENST00000450974.1 chr22:34121058-34140179 7 740 18369 intronic 2.92 0 0,1,0 0 0,0,0 0 13.8307474549513 0 3.05945945945946 9.62981109477925 0 3.18918918918919 12.5115139637433 0 0 0 chimp,human,macaque,marmoset,orangutan, antisense antisense A549@0,AG04450@0.001569,BJ@0,GM12878@0,H1HESC@0.001416,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000224973.1 ENST00000445892.1 chr22:34139996-34146644 4 568 6074 intronic 3.91 0 0,0,1 0 0,0,0 0 0 0 11.4595070422535 2.53704313467237 0 11.9454225352113 2.99012183075403 0 0 0 chimp,elephant,horse,human,marmoset,orangutan, antisense retained_intron A549@0,AG04450@0.001569,BJ@0,GM12878@0,H1HESC@0.001416,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000224973.1 ENST00000416275.1 chr22:34140116-34146670 3 432 6118 intronic 0.89 0 0,0,1 0 0,0,0 0 0 0 5.24074074074074 2.5187969924812 3.962 5.46296296296296 2.96861719516182 4.13 0 0 chimp,elephant,horse,human,macaque,marmoset,orangutan, antisense antisense A549@0,AG04450@0.001569,BJ@0,GM12878@0,H1HESC@0.001416,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000236052.1 ENST00000412218.1 chr22:34413462-34584414 8 749 170189 intergenic 0 0 0,0,0 0 0,0,0 79.4499332443258 8.97145526444129 122.553 69.392523364486 8.8050814094918 94.321 80.7089452603471 9.81297851212475 94.548 0 0 cat,chimp,cow,dog,elephant,horse,human,macaque,marmoset,mouse,orangutan,pig,rabbit, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000224404.1 ENST00000450365.1 chr22:34604130-34605251 2 517 602 intergenic -4.74 0 0,0,1 0 0,0,0 0 0 0 4.93230174081238 0 0 5.1257253384913 0 0 0 0 chimp,cow,dog,elephant,horse,human,macaque,marmoset,orangutan, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000234891.1 ENST00000423712.1 chr22:35099117-35100876 3 765 990 intergenic 4.57 0 0,0,0 0 0,0,0 0 0 12.648 0 0 0 0 0 2.673 0 0 cat,chimp,cow,horse,human,macaque,orangutan,panda, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0.0243495,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0.0053585,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000237316.1 ENST00000440858.1 chr22:35107899-35120910 4 545 12460 intergenic 1.95 0 0,0,0 0 0,0,0 0 8.22199036918138 0 0 4.13900481540931 0 0 4.84133226324238 0 0 0 chimp,horse,human,macaque,marmoset,orangutan, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0.0149915,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000227895.2 ENST00000448318.2 chr22:35318616-35468882 11 2140 148106 intronic 3.29 0 0,0,1 0 0,0,0 8.18878504672897 7.23431866365981 0 0 9.40404845178453 0 0.908411214953271 11.4071543354084 0 1 1 chimp,human,macaque,marmoset,orangutan, antisense antisense A549@0.003136,AG04450@0,BJ@0,GM12878@0.0104295,H1HESC@0,HELAS3@0.0019405,HEPG2@0.008462,HMEC@0,HSMM@0,HUVEC@0.0037245,K562@0.218695,MCF7@0.0018695,NHEK@0.0112993,NHLF@0,SKNSHRA@0.0063345, 0 0 0 0 ENSG00000227895.2 ENST00000427881.1 chr22:35393708-35398852 2 200 4942 intergenic 0 0 0,0,0 0 0,0,0 0 7.67604208822339 0 0 1.70153783893161 28.216 0 2.13759611493322 28.337 0 0 chimp,dog,elephant,horse,human,macaque,marmoset,orangutan, antisense antisense A549@0.003136,AG04450@0,BJ@0,GM12878@0.0104295,H1HESC@0,HELAS3@0.0019405,HEPG2@0.008462,HMEC@0,HSMM@0,HUVEC@0.0037245,K562@0.218695,MCF7@0.0018695,NHEK@0.0112993,NHLF@0,SKNSHRA@0.0063345, 0 0 0 0 ENSG00000233080.2 ENST00000423311.1 chr22:35515817-35627049 6 642 110580 intergenic 0.97 0 0,1,0 1 0,0,0 0 5.19275637547477 0 33.7757009345794 8.81523783686019 9.408 34.1806853582555 9.55638451799602 9.728 0 0 chimp,cow,dog,guinea_pig,horse,human,macaque,marmoset,mouse,orangutan,rat, processed_transcript processed_transcript A549@0.0498875,AG04450@0.0149285,BJ@0.03323,GM12878@0.0893565,H1HESC@0.004491,HELAS3@0.163115,HEPG2@0.132788,HMEC@0,HSMM@0,HUVEC@0,K562@0.899876,MCF7@0.0031025,NHEK@0.015032,NHLF@0,SKNSHRA@0.153545, 0 0 0 0 ENSG00000228587.1 ENST00000417782.1 chr22:36081987-36085420 2 599 2832 intergenic 2.38 0 0,0,0 0 0,0,0 0 0 0 0 0 0 0 0 0 0 0 chimp,human,macaque,marmoset,orangutan, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0.0089095,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000223695.1 ENST00000424761.1 chr22:36784671-36792562 2 508 7381 intergenic -3.39 0 0,1,0 0 0,0,0 0 0 31.164 0 1.59178973038884 170.045 0 3.22002438693944 150.499 0 0 chimp,elephant,horse,human,macaque,marmoset,orangutan, lincRNA lincRNA A549@0.077733,AG04450@0.178188,BJ@0.165605,GM12878@0.064814,H1HESC@0.122013,HELAS3@0.183312,HEPG2@0.102018,HMEC@0.008029,HSMM@0.0286765,HUVEC@0.0461115,K562@0.0484285,MCF7@0.0438105,NHEK@0.266246,NHLF@0.064785,SKNSHRA@0.199848, 0 0 0 0 ENSG00000228719.1 ENST00000442579.1 chr22:36841445-36850991 2 370 9174 intergenic -8.20 0 0,1,0 0 0,0,0 0 2.13102245476346 0 0 2.66056245912361 2.295 0 2.69435360802267 7.92 0 0 cat,chimp,cow,human,macaque,marmoset,orangutan,pig, lincRNA lincRNA A549@0.209863,AG04450@0.046723,BJ@0.0131235,GM12878@0.0477175,H1HESC@0.062408,HELAS3@0.10798,HEPG2@0.0277255,HMEC@0,HSMM@0,HUVEC@0.016,K562@0.056027,MCF7@0.0816805,NHEK@0.00343167,NHLF@0,SKNSHRA@0.0800295, 0 0 0 0 ENSG00000229971.1 ENST00000433970.1 chr22:36948212-36948747 2 403 130 intergenic 0.10 0 0,0,0 0 0,0,0 0 0 0 0 0 0 4.0818858560794 0 0 0 0 cat,chimp,dog,horse,human,macaque,orangutan,rabbit, antisense antisense A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000234688.1 ENST00000430281.1 chr22:37099963-37117517 2 630 16922 intergenic -1.45 0 0,0,0 0 0,0,0 0 11.9594610566127 387.63 8.23809523809524 13.1813024465193 354.877 31.1047619047619 15.1386360950242 371.287 0 0 cat,chimp,elephant,horse,human,macaque,marmoset,orangutan,panda, antisense antisense A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0.242352, 0 0 0 0 ENSG00000234979.1 ENST00000417792.1 chr22:37212370-37215780 3 546 2860 intronic 3.61 0 0,1,0 0 0,0,0 16.0164835164835 42.0517482517483 0 32.1153846153846 74.4423076923077 9.712 46.3095238095238 71.58006993007 10.281 0 0 cat,chimp,dog,elephant,guinea_pig,horse,human,macaque,marmoset,mouse,orangutan,panda,pig,rabbit,rat, antisense antisense A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0.0275755,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000183822.2 ENST00000330602.2 chr22:37243415-37266483 2 992 22074 exonic 6.36 1 0,0,1 0 0,0,0 2.46774193548387 3.68428920902419 26.928 8.52116935483871 9.78857479387515 37.58 8.27520161290323 11.3639575971731 38.417 0 0 human,orangutan, antisense antisense A549@0,AG04450@0,BJ@0,GM12878@0.017706,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0.004119,HSMM@0,HUVEC@0,K562@0,MCF7@0.0370595,NHEK@0.0101637,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000183822.2 ENST00000431290.1 chr22:37254063-37266422 2 509 11848 intronic 6.36 1 0,0,0 0 0,0,0 0 6.86419648885888 29.648 0 14.8732275489534 46.469 0 17.3829338284943 47.101 0 0 elephant,horse,human,macaque,orangutan,panda, antisense antisense A549@0,AG04450@0,BJ@0,GM12878@0.017706,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0.004119,HSMM@0,HUVEC@0,K562@0,MCF7@0.0370595,NHEK@0.0101637,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000215403.1 ENST00000400221.1 chr22:37361289-37364213 4 988 1930 intergenic 3.22 0 0,0,0 0 0,0,0 0 0 0 0 1.92746113989637 0 0 2.73108808290155 0 0 0 NA antisense antisense A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0.002803, 0 0 0 0 ENSG00000231467.2 ENST00000414203.2 chr22:37476108-37478887 3 461 2314 intronic 4.20 1 0,1,1 0 0,0,0 0 3.07087294727744 0 21.6138828633406 3.12748487467589 4.575 16.590021691974 4.87381158167675 4.55 0 0 chimp,cow,dog,horse,human,macaque,marmoset,orangutan,panda, antisense antisense A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000235237.1 ENST00000419128.1 chr22:37562797-37578890 2 628 15463 exonic 6.67 0 0,1,0 1 0,0,0 0 3.83929379809869 0 185.160828025478 9.40794153786458 2.312 182.390127388535 16.6704391127207 4.329 0 0 cat,chimp,cow,dog,elephant,guinea_pig,horse,human,macaque,marmoset,opossum,orangutan,panda,rat, antisense antisense A549@0.0253975,AG04450@0.0035575,BJ@0,GM12878@0.133204,H1HESC@0,HELAS3@0.143251,HEPG2@0.086595,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0.025892,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000243902.1 ENST00000430883.1 chr22:37735624-37781323 3 1967 43728 intronic 6.13 0 0,0,0 0 0,0,0 60.2175902389425 41.8472603366264 0 59.3762074224708 48.5761983168679 3.679 66.2750381291307 48.5311699597512 3.952 0 0 chimp,human,marmoset,orangutan, processed_transcript processed_transcript A549@0.031193,AG04450@0.077941,BJ@0.05756,GM12878@0.002812,H1HESC@0.150306,HELAS3@0.0126545,HEPG2@0.077625,HMEC@0.111899,HSMM@0.084201,HUVEC@0.041331,K562@0,MCF7@0.039267,NHEK@0.0140537,NHLF@0,SKNSHRA@0.0048535, 0 0 0 0 ENSG00000237862.1 ENST00000445088.1 chr22:37748230-37750879 2 1963 684 intergenic 0.25 1 0,0,1 0 0,0,0 27.7554763117677 0 0 0 0 0 0 0 0 0 0 chimp,dog,horse,human,macaque,orangutan,panda,pig, lincRNA lincRNA A549@0.0052265,AG04450@0.000568,BJ@0,GM12878@0,H1HESC@0,HELAS3@0.0002145,HEPG2@0,HMEC@0,HSMM@0.002375,HUVEC@0,K562@0,MCF7@0.0093295,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000225867.1 ENST00000428838.1 chr22:37946033-37947742 2 496 1211 intergenic 5.04 0 0,0,1 0 0,0,0 0 0 63.296 0 4.14450867052023 54.924 0 4.35260115606936 54.736 0 0 chimp,human,macaque,marmoset,orangutan, antisense antisense A549@0,AG04450@0.0090015,BJ@0,GM12878@0,H1HESC@0.02387,HELAS3@0.233926,HEPG2@0.255668,HMEC@0.016444,HSMM@1.20367,HUVEC@0,K562@0,MCF7@0,NHEK@0.370823,NHLF@0.003918,SKNSHRA@0, 0 0 0 0 ENSG00000233360.2 ENST00000456099.1 chr22:38037839-38054384 6 1939 14596 exonic 11.93 0 1,1,1 0 0,0,0 57.9747292418773 15.0486434639627 77.022 102.518824136153 38.6053713346122 281.842 87.6018566271274 35.2080707043026 288.708 0 0 cat,chimp,cow,dog,elephant,human,macaque,orangutan,panda, antisense antisense A549@0.0448775,AG04450@0.0024215,BJ@0.0166945,GM12878@0.041781,H1HESC@0.0190895,HELAS3@0.0085375,HEPG2@0.068552,HMEC@0.002105,HSMM@0,HUVEC@0.0105605,K562@0.047387,MCF7@0.017839,NHEK@0,NHLF@0,SKNSHRA@0.00467, 0 0 0 0 ENSG00000222044.1 ENST00000410099.1 chr22:38428172-38430235 2 1053 1008 intronic 4.81 0 0,0,0 0 0,1,0 0 16.6666666666667 0 0 70.2876984126984 0 0 75.3680555555556 0 0 1 chimp,human,macaque,orangutan, antisense antisense A549@0.0191805,AG04450@0,BJ@0,GM12878@0.030714,H1HESC@0.109639,HELAS3@0.0100625,HEPG2@0.0310265,HMEC@0.007762,HSMM@0,HUVEC@0,K562@0.033112,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0.0043085, 0 0 0 0 ENSG00000233739.1 ENST00000445483.1 chr22:38453187-38469947 2 412 16346 exonic 0 0 0,0,1 0 0,0,0 76.0946601941748 29.3626575308944 74.277 129.638349514563 36.433928789918 126.496 126.252427184466 38.4314817080631 140.83 0 0 cat,chimp,cow,dog,elephant,guinea_pig,horse,human,macaque,marmoset,mouse,orangutan,panda,pig,rabbit,rat, antisense antisense A549@0.005243,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000235246.1 ENST00000420172.1 chr22:38627326-38628254 2 295 631 exonic 0.14 0 0,1,0 0 0,0,0 19.1898305084746 0 39.761 30.3694915254237 0 77.319 35.3050847457627 0 81.967 0 0 chimp,cow,elephant,horse,human,macaque,marmoset,orangutan, processed_transcript processed_transcript A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0.004298,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000229955.1 ENST00000454123.1 chr22:38783923-38784862 2 539 398 intronic -3.70 0 0,0,0 0 0,0,0 0 0 0 0 0 0 0 0 0 0 0 cat,chimp,cow,dog,elephant,horse,human,macaque,marmoset,orangutan,panda,pig, processed_transcript processed_transcript A549@0.009897,AG04450@0.019835,BJ@0.0558505,GM12878@0.059929,H1HESC@0.121217,HELAS3@0.0486585,HEPG2@0.0054975,HMEC@0,HSMM@0,HUVEC@0.022834,K562@0.106575,MCF7@0,NHEK@0.0431937,NHLF@0.005028,SKNSHRA@0.07941, 0 0 0 0 ENSG00000228620.1 ENST00000433230.1 chr22:38820293-38823341 3 553 2491 exonic 13.92 0 0,0,1 0 0,0,0 300.215189873418 66.493376154155 0 366.721518987342 116.888398233641 0 282.336347197107 100.207145724609 0 0 0 cat,chimp,dog,elephant,guinea_pig,horse,human,macaque,marmoset,opossum,orangutan,pig,rabbit, antisense antisense A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0.0044505,HELAS3@0.0047735,HEPG2@0.074662,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0.003616,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000230912.1 ENST00000423346.1 chr22:39062513-39064755 2 408 1832 intronic -7.32 0 0,0,0 0 0,0,0 0 14.4126637554585 0 0 20.0420305676856 3.585 0 22.7718340611354 3.765 0 0 chimp,human,macaque,marmoset,orangutan, antisense antisense A549@0,AG04450@0.0697805,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0.0123445,NHEK@0.011124,NHLF@0,SKNSHRA@0.0525845, 0 0 0 0 ENSG00000228274.1 ENST00000431924.1 chr22:39063835-39077775 2 539 13399 exonic 11.20 0 0,1,0 1 0,0,0 48.987012987013 7.46563176356445 67.77 68.1205936920223 9.91842674826479 129.831 77.3988868274582 11.4624225688484 128.534 0 0 chimp,cow,dog,elephant,horse,human,macaque,marmoset,orangutan,pig,rabbit, antisense antisense A549@0.290392,AG04450@1.57208,BJ@1.11363,GM12878@0.313643,H1HESC@1.14663,HELAS3@1.15875,HEPG2@1.8811,HMEC@1.09381,HSMM@0.876416,HUVEC@0.648559,K562@1.57064,MCF7@0.075675,NHEK@1.03132,NHLF@2.08716,SKNSHRA@2.18389, 0 0 0 0 ENSG00000228274.1 ENST00000422408.1 chr22:39063867-39065832 2 602 1361 exonic 11.20 0 0,0,0 0 0,0,0 43.8604651162791 0 0 60.9916943521595 2.63409257898604 0 69.2990033222591 2.76634827332843 2.78 0 0 chimp,cow,dog,human,marmoset,orangutan,panda, antisense antisense A549@0.290392,AG04450@1.57208,BJ@1.11363,GM12878@0.313643,H1HESC@1.14663,HELAS3@1.15875,HEPG2@1.8811,HMEC@1.09381,HSMM@0.876416,HUVEC@0.648559,K562@1.57064,MCF7@0.075675,NHEK@1.03132,NHLF@2.08716,SKNSHRA@2.18389, 0 0 0 0 ENSG00000228274.1 ENST00000444381.1 chr22:39066473-39077825 2 1323 10027 exonic 8.47 0 0,1,0 1 0,0,0 62.140589569161 1.77720155579934 67.77 76.297052154195 2.82946045676673 129.831 82.3272864701436 4.07908646654034 128.534 0 0 chimp,cow,dog,elephant,horse,human,macaque,marmoset,orangutan,panda, antisense antisense A549@0.290392,AG04450@1.57208,BJ@1.11363,GM12878@0.313643,H1HESC@1.14663,HELAS3@1.15875,HEPG2@1.8811,HMEC@1.09381,HSMM@0.876416,HUVEC@0.648559,K562@1.57064,MCF7@0.075675,NHEK@1.03132,NHLF@2.08716,SKNSHRA@2.18389, 0 0 0 0 ENSG00000228274.1 ENST00000412067.1 chr22:39071819-39077792 2 736 5235 intergenic -3.51 0 0,1,0 1 0,0,0 0 0 67.77 0 0.63323782234957 129.831 0 0.643170964660936 128.534 0 0 chimp,human,macaque,orangutan, antisense antisense A549@0.290392,AG04450@1.57208,BJ@1.11363,GM12878@0.313643,H1HESC@1.14663,HELAS3@1.15875,HEPG2@1.8811,HMEC@1.09381,HSMM@0.876416,HUVEC@0.648559,K562@1.57064,MCF7@0.075675,NHEK@1.03132,NHLF@2.08716,SKNSHRA@2.18389, 0 0 0 0 ENSG00000244491.1 ENST00000420118.1 chr22:39130730-39134770 2 459 3579 exonic 8.28 0 1,1,1 0 0,0,0 123.62091503268 27.5286392847164 0 221.481481481481 42.7225481978206 0 214.213507625272 44.183291422185 0 0 0 cat,chimp,cow,dog,guinea_pig,horse,human,macaque,marmoset,panda,pig,rabbit, processed_transcript processed_transcript A549@0.0772925,AG04450@0.0894695,BJ@0.0660945,GM12878@0.968062,H1HESC@0.881962,HELAS3@0.173432,HEPG2@0.459316,HMEC@0.051233,HSMM@0.023893,HUVEC@1.06,K562@0.133399,MCF7@0.574066,NHEK@0.0444037,NHLF@0.0679435,SKNSHRA@0.074172, 0 0 0 0 ENSG00000230149.2 ENST00000418803.1 chr22:39130735-39134995 3 524 3732 exonic 9.18 0 1,1,1 0 0,0,0 175.400763358779 25.626741693462 0 303.528625954198 39.4748124330118 0 320.206106870229 39.8601286173633 0 0 0 cat,chimp,cow,dog,elephant,guinea_pig,horse,human,macaque,marmoset,mouse,orangutan,panda,pig,platypus,rabbit,rat, processed_transcript processed_transcript A549@0.0791935,AG04450@0.085556,BJ@0.142747,GM12878@0.15591,H1HESC@0.200325,HELAS3@0.265037,HEPG2@0.150707,HMEC@0,HSMM@0.0173625,HUVEC@0.158396,K562@0.153345,MCF7@0.0615405,NHEK@0.087422,NHLF@0,SKNSHRA@0.0578385, 0 0 0 0 ENSG00000225450.1 ENST00000416406.1 chr22:39135008-39145046 2 498 9538 exonic 7.08 0 0,1,1 0 0,0,0 0 14.7388341371357 112.439 48.7088353413655 29.973369679178 168.301 44.9779116465863 28.0419375131055 174.306 0 0 cat,chimp,cow,dog,elephant,guinea_pig,horse,human,macaque,marmoset,orangutan,panda,pig, antisense antisense A549@0.191114,AG04450@0.0979225,BJ@0.097723,GM12878@0.427229,H1HESC@0.659236,HELAS3@0.740189,HEPG2@0.658932,HMEC@0.049135,HSMM@0.0549695,HUVEC@0.331041,K562@0.231311,MCF7@0.283613,NHEK@0.108503,NHLF@0.0231975,SKNSHRA@0.087671, 0 0 0 0 ENSG00000235209.1 ENST00000450216.1 chr22:39317232-39320713 2 676 2803 intergenic 1.58 0 0,0,0 0 0,0,0 79.0562130177515 0 0 69.7189349112426 0.908669282911167 0 76.3269230769231 0.911880128433821 0 0 0 cat,chimp,dog,horse,human,macaque,panda,rat, lincRNA lincRNA A549@0.016296,AG04450@0.0370355,BJ@0.067603,GM12878@0.014866,H1HESC@0.0367085,HELAS3@0.0554085,HEPG2@0.0461665,HMEC@0,HSMM@0,HUVEC@0.0071725,K562@0,MCF7@0.036256,NHEK@0,NHLF@0.017139,SKNSHRA@0.0066925, 0 0 0 0 ENSG00000249310.2 ENST00000513758.2 chr22:39387564-39394214 5 686 5956 exonic 1.05 0 0,0,1 0 0,0,0 0 0 0 0 0.28089321692411 0 0 1.14590329079919 0 0 0 chimp,dog,human,marmoset,orangutan, antisense antisense A549@0,AG04450@0,BJ@0.003502,GM12878@0,H1HESC@2.56718,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0.0029775,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000225720.1 ENST00000424436.1 chr22:39487639-39488860 3 589 628 intergenic -4.29 0 0,0,1 0 0,0,0 0 0 0 0 0 0 0 0 0 0 0 chimp,human,macaque,marmoset,orangutan, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0.135068,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@2.25176,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0.10796,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000233899.1 ENST00000430647.1 chr22:39532704-39537189 2 2362 2121 intronic 1.13 0 0,0,1 0 0,0,0 0 26.8033946251768 31.59 1.22480948348857 34.4554455445545 44.553 1.26672311600339 23.7402168788307 49.005 0 0 chimp,human,macaque, processed_transcript processed_transcript A549@0.072996,AG04450@0.070208,BJ@0.126443,GM12878@0.58572,H1HESC@0.185769,HELAS3@0.221239,HEPG2@0.208027,HMEC@0.014688,HSMM@0.0378905,HUVEC@0.227276,K562@0.197574,MCF7@0.299107,NHEK@0.0591177,NHLF@0.0697215,SKNSHRA@0.0849745, 0 0 0 0 ENSG00000224794.1 ENST00000434516.1 chr22:39688993-39691568 2 1776 797 intergenic 2.68 0 0,0,0 0 0,0,0 0 0 55.404 4.77364864864865 0 42.495 4.81925675675676 0 42.183 0 0 cat,chimp,horse,human,macaque,marmoset, antisense antisense A549@0.015556,AG04450@0.0233695,BJ@0,GM12878@0,H1HESC@0.022074,HELAS3@0.11379,HEPG2@0.114442,HMEC@0.009212,HSMM@0.0123215,HUVEC@0.0087425,K562@0.192904,MCF7@0.139467,NHEK@0.0125047,NHLF@0.0010975,SKNSHRA@0.0227665, 0 0 0 0 ENSG00000227188.1 ENST00000432239.1 chr22:39871812-39872827 2 496 517 intronic 4.88 0 0,0,0 0 0,0,0 0 0 0 0 0 0 0 0 0 0 0 chimp,dog,horse,human,macaque,marmoset,orangutan,pig, antisense antisense A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0.0197275,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000225528.1 ENST00000424496.1 chr22:40356401-40360687 2 1285 2999 intronic 23.89 0 0,0,1 0 0,0,0 0 3.5945315105035 95.408 38.7268482490272 5.95998666222074 78.837 40.1891050583658 7.44348116038679 79.334 0 0 chimp,human,macaque, sense_intronic sense_intronic A549@0.0038325,AG04450@0.0010365,BJ@0,GM12878@0.84095,H1HESC@0.003357,HELAS3@0.0124895,HEPG2@0.0012315,HMEC@0.00148,HSMM@0,HUVEC@0.012063,K562@1.91942,MCF7@0.001562,NHEK@0,NHLF@0.000479,SKNSHRA@0.001794, 0 0 0 0 ENSG00000229999.1 ENST00000414261.1 chr22:40768668-40784294 2 430 15194 intronic -2.71 0 0,0,0 0 0,0,0 43.6302325581395 10.7396998815322 0 32.6093023255814 4.29103593523759 0 50.8209302325581 39.2764249045676 0 0 0 chimp,cow,dog,elephant,guinea_pig,horse,human,macaque,marmoset,mouse,orangutan,panda, antisense antisense A549@0,AG04450@0.0051885,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0.0047595,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000232564.1 ENST00000417123.1 chr22:40917804-40922711 4 1928 2973 intronic 0.09 0 0,0,0 0 0,0,0 0 0 0 3.40612033195021 12.6646485031954 0 3.65715767634855 16.3124789774638 0 0 0 chimp,human,macaque,orangutan, antisense antisense A549@0,AG04450@0.006676,BJ@0.0134,GM12878@0.0015135,H1HESC@0.0030125,HELAS3@0,HEPG2@0.003033,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0.0028785, 0 0 0 0 ENSG00000232754.1 ENST00000415054.1 chr22:41565194-41579148 3 354 13596 exonic -1.61 0 0,0,0 0 0,0,0 66.5 162.014563106796 0 99.8333333333333 180.731832892027 0 113.333333333333 170.67968520153 0 0 0 cat,chimp,elephant,guinea_pig,horse,human,macaque,marmoset,orangutan,panda,pig,rabbit,rat, antisense antisense A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000231993.1 ENST00000420537.1 chr22:41570595-41593460 3 454 22407 intronic -5.81 0 0,1,0 1 0,0,0 0 85.8728076047664 0 33.4162995594714 95.5727674387468 0 34.1035242290749 88.5066720221359 0 0 0 chimp,human,orangutan, lincRNA processed_transcript A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0.043427,HEPG2@0.0295985,HMEC@0,HSMM@0,HUVEC@0.0308115,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000235513.1 ENST00000441316.1 chr22:41605126-41613631 3 2497 6004 exonic 2.67 0 0,1,0 0 0,0,0 94.1145374449339 9.56862091938708 0 106.8934721666 11.4462025316456 0 102.591910292351 10.3187874750167 0 0 0 cat,chimp,cow,elephant,horse,human,macaque,marmoset,orangutan,panda,rabbit, antisense antisense A549@0.021373,AG04450@0.92199,BJ@1.33281,GM12878@0.0515105,H1HESC@0.0126485,HELAS3@0.0310195,HEPG2@0.061258,HMEC@0.08353,HSMM@0.622877,HUVEC@0.139927,K562@0.059746,MCF7@0.036956,NHEK@0.0227177,NHLF@0.544107,SKNSHRA@0.0174945, 0 0 0 0 ENSG00000235513.1 ENST00000451176.1 chr22:41605686-41613627 3 777 7160 exonic 2.67 0 0,1,0 0 0,0,0 209.786357786358 18.0796089385475 0 225.487773487773 22.3103351955307 0 220.11583011583 20.2723463687151 0 0 0 cat,chimp,cow,dog,elephant,guinea_pig,horse,human,macaque,marmoset,mouse,orangutan,panda,pig,rabbit,rat, antisense antisense A549@0.021373,AG04450@0.92199,BJ@1.33281,GM12878@0.0515105,H1HESC@0.0126485,HELAS3@0.0310195,HEPG2@0.061258,HMEC@0.08353,HSMM@0.622877,HUVEC@0.139927,K562@0.059746,MCF7@0.036956,NHEK@0.0227177,NHLF@0.544107,SKNSHRA@0.0174945, 0 0 0 0 ENSG00000184068.2 ENST00000333487.2 chr22:42227219-42230669 2 2987 461 exonic 7.28 0 0,1,0 0 0,0,0 72.9092735185805 150.117136659436 3.3 102.731168396384 115.598698481562 0 86.0632741881486 116.494577006508 0 0 0 chimp,cow,human,macaque,marmoset,orangutan, lincRNA processed_transcript A549@0.044689,AG04450@0.033837,BJ@0.011503,GM12878@0.383672,H1HESC@0.170021,HELAS3@0.219907,HEPG2@0.135542,HMEC@0.024658,HSMM@0.048073,HUVEC@0.075616,K562@0.0700065,MCF7@0.100524,NHEK@0.03922,NHLF@0.063678,SKNSHRA@0.041629, 0 0 0 0 ENSG00000224883.1 ENST00000424613.1 chr22:42377308-42378221 3 512 397 exonic 8.95 0 0,0,0 0 0,0,0 72.216796875 131.486146095718 0 95.955078125 170.015113350126 0 124.5859375 185.732997481108 0 0 0 chimp,cow,dog,guinea_pig,horse,human,macaque,marmoset,orangutan,panda,pig,rabbit, antisense antisense A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000237037.3 ENST00000416037.1 chr22:42486937-42533614 7 2804 43861 exonic 4.87 0 0,1,0 1 0,0,0 0 19.0419507079182 57.816 1.33202567760342 28.7077586010351 81.054 48.4893009985735 36.5485739039238 88.667 0 0 chimp,cow,horse,human,macaque,marmoset,orangutan, lincRNA processed_transcript A549@1.50741,AG04450@2.93728,BJ@2.82078,GM12878@3.59091,H1HESC@3.41652,HELAS3@2.59918,HEPG2@3.58594,HMEC@1.66959,HSMM@4.28731,HUVEC@1.85212,K562@2.02907,MCF7@1.64061,NHEK@1.1864,NHLF@1.99093,SKNSHRA@3.79981, 0 0 0 0 ENSG00000237037.3 ENST00000417327.1 chr22:42486960-42521354 4 1517 32871 intergenic 3.81 0 0,1,0 1 0,0,0 0 20.9852149310943 57.816 1.98945286750165 27.9897173800615 81.054 77.2926829268293 32.6482613854157 88.667 0 0 chimp,cow,elephant,horse,human,macaque,marmoset,orangutan,pig, lincRNA processed_transcript A549@1.50741,AG04450@2.93728,BJ@2.82078,GM12878@3.59091,H1HESC@3.41652,HELAS3@2.59918,HEPG2@3.58594,HMEC@1.66959,HSMM@4.28731,HUVEC@1.85212,K562@2.02907,MCF7@1.64061,NHEK@1.1864,NHLF@1.99093,SKNSHRA@3.79981, 0 0 0 0 ENSG00000237037.3 ENST00000439129.1 chr22:42486960-42533510 4 1517 45027 intronic 3.81 0 0,1,0 1 0,0,0 0 18.5488484686966 57.816 1.8905735003296 27.990028205299 81.054 3.0435069215557 35.6595598196637 88.667 0 0 chimp,cow,elephant,horse,human,macaque,marmoset,orangutan,pig, lincRNA processed_transcript A549@1.50741,AG04450@2.93728,BJ@2.82078,GM12878@3.59091,H1HESC@3.41652,HELAS3@2.59918,HEPG2@3.58594,HMEC@1.66959,HSMM@4.28731,HUVEC@1.85212,K562@2.02907,MCF7@1.64061,NHEK@1.1864,NHLF@1.99093,SKNSHRA@3.79981, 0 0 0 0 ENSG00000237037.3 ENST00000536447.1 chr22:42486960-42533510 4 1517 45027 intronic 3.81 0 0,1,0 1 0,0,0 0 18.5488484686966 57.816 1.8905735003296 27.990028205299 81.054 3.0435069215557 35.6595598196637 88.667 0 0 chimp,cow,elephant,horse,human,macaque,marmoset,orangutan,pig, lincRNA processed_transcript A549@1.50741,AG04450@2.93728,BJ@2.82078,GM12878@3.59091,H1HESC@3.41652,HELAS3@2.59918,HEPG2@3.58594,HMEC@1.66959,HSMM@4.28731,HUVEC@1.85212,K562@2.02907,MCF7@1.64061,NHEK@1.1864,NHLF@1.99093,SKNSHRA@3.79981, 0 0 0 0 ENSG00000237037.3 ENST00000434834.1 chr22:42487406-42521007 5 563 33030 intergenic 1.52 0 0,0,0 0 0,0,0 0 20.8841961852861 57.816 1.53996447602131 27.8549803209204 83.205 74.9893428063943 32.5214956100515 88.667 0 0 cat,chimp,guinea_pig,horse,human,macaque,marmoset,orangutan,pig, lincRNA processed_transcript A549@1.50741,AG04450@2.93728,BJ@2.82078,GM12878@3.59091,H1HESC@3.41652,HELAS3@2.59918,HEPG2@3.58594,HMEC@1.66959,HSMM@4.28731,HUVEC@1.85212,K562@2.02907,MCF7@1.64061,NHEK@1.1864,NHLF@1.99093,SKNSHRA@3.79981, 0 0 0 0 ENSG00000237037.3 ENST00000451451.1 chr22:42519739-42521033 3 591 699 intergenic 10.49 0 0,0,0 0 0,0,0 0 0 0 1.46700507614213 2.06723891273248 15.192 82.1269035532995 3.68812589413448 15.824 0 0 chimp,cow,dog,elephant,horse,human,macaque,marmoset,orangutan,pig,rabbit, lincRNA processed_transcript A549@1.50741,AG04450@2.93728,BJ@2.82078,GM12878@3.59091,H1HESC@3.41652,HELAS3@2.59918,HEPG2@3.58594,HMEC@1.66959,HSMM@4.28731,HUVEC@1.85212,K562@2.02907,MCF7@1.64061,NHEK@1.1864,NHLF@1.99093,SKNSHRA@3.79981, 0 0 0 0 ENSG00000232710.1 ENST00000428786.1 chr22:42532442-42535938 3 664 2828 intronic 8.54 0 0,0,0 0 0,0,0 0 0 17.408 0 0.760608203677511 99.549 0 0 104.855 0 0 cat,chimp,horse,human,macaque,marmoset,orangutan,rabbit, sense_intronic sense_intronic A549@0.011706,AG04450@0.005639,BJ@0.0248665,GM12878@0.026834,H1HESC@0.023281,HELAS3@0.0322915,HEPG2@0.0278535,HMEC@0.002848,HSMM@0.100968,HUVEC@0,K562@0.018747,MCF7@0.008092,NHEK@0.036294,NHLF@0,SKNSHRA@0.0086685, 0 0 0 0 ENSG00000182057.4 ENST00000332965.3 chr22:42665759-42670868 2 1240 3867 intergenic 3.45 1 1,1,1 1 0,0,0 68.7395161290323 49.4497026118438 38.163 63.3459677419355 92.144297905353 106.139 58.9991935483871 94.8376002068787 105.459 0 0 chimp,cow,dog,horse,human,macaque,orangutan, lincRNA lincRNA A549@0.170677,AG04450@0.066301,BJ@0.0974115,GM12878@0.292322,H1HESC@0.090448,HELAS3@0.526022,HEPG2@0.500605,HMEC@0.478969,HSMM@0.0110225,HUVEC@0.0577595,K562@0.0731055,MCF7@0.294496,NHEK@0.331039,NHLF@0.0128375,SKNSHRA@0.0901885, 0 0 0 0 ENSG00000182057.4 ENST00000415205.1 chr22:42665766-42671202 2 473 4961 intergenic 3.45 0 0,1,1 1 0,0,0 96.9513742071882 52.6734529328764 40.172 38.5116279069767 83.5545252973191 108.911 30.1162790697674 85.3793590002016 108.154 0 0 chimp,cow,guinea_pig,human,macaque,marmoset,orangutan,panda,pig, lincRNA lincRNA A549@0.170677,AG04450@0.066301,BJ@0.0974115,GM12878@0.292322,H1HESC@0.090448,HELAS3@0.526022,HEPG2@0.500605,HMEC@0.478969,HSMM@0.0110225,HUVEC@0.0577595,K562@0.0731055,MCF7@0.294496,NHEK@0.331039,NHLF@0.0128375,SKNSHRA@0.0901885, 0 0 0 0 ENSG00000182057.4 ENST00000446578.1 chr22:42665774-42671039 4 547 4712 intergenic 3.45 0 0,1,0 1 0,0,0 119.254113345521 46.3902801358234 42.468 110.566727605119 78.1941850594228 112.079 100.835466179159 80.4252971137521 111.234 0 0 cow,guinea_pig,human,macaque,orangutan,panda,pig, lincRNA lincRNA A549@0.170677,AG04450@0.066301,BJ@0.0974115,GM12878@0.292322,H1HESC@0.090448,HELAS3@0.526022,HEPG2@0.500605,HMEC@0.478969,HSMM@0.0110225,HUVEC@0.0577595,K562@0.0731055,MCF7@0.294496,NHEK@0.331039,NHLF@0.0128375,SKNSHRA@0.0901885, 0 0 0 0 ENSG00000233903.1 ENST00000420096.1 chr22:42672361-42673057 2 542 152 intergenic 4.72 0 0,1,1 0 0,0,0 0 0 127.472 0 0 124.998 0 0 122.195 0 0 cat,chimp,cow,dog,elephant,horse,human,macaque,marmoset,mouse,orangutan,panda,pig, lincRNA lincRNA A549@1.03551,AG04450@0.288183,BJ@0.620489,GM12878@1.48651,H1HESC@0.621063,HELAS3@2.53401,HEPG2@3.08658,HMEC@1.80645,HSMM@0.150556,HUVEC@0.335623,K562@0.332829,MCF7@1.50975,NHEK@2.11134,NHLF@0.256981,SKNSHRA@0.442299, 0 0 0 0 ENSG00000229891.1 ENST00000432473.1 chr22:42760406-42765174 2 778 3988 intergenic 13.34 0 1,1,1 1 0,0,0 133.829048843188 70.4157472417252 0 85.2300771208226 79.0017552657974 15.053 86.3149100257069 80.4363089267803 15.715 0 0 chimp,cow,dog,elephant,guinea_pig,horse,human,macaque,marmoset,mouse,orangutan,panda,pig,rabbit, lincRNA lincRNA A549@0.0206215,AG04450@0.0319835,BJ@0.074204,GM12878@0.0694325,H1HESC@5.76099,HELAS3@0.148236,HEPG2@0.0710615,HMEC@0.11258,HSMM@0.009592,HUVEC@0.004258,K562@0.05189,MCF7@0.106342,NHEK@0.11597,NHLF@0.0317445,SKNSHRA@0.209965, 0 0 0 0 ENSG00000229891.1 ENST00000412060.1 chr22:42760408-42765214 2 473 4331 intergenic -7.54 0 1,1,1 1 0,0,0 220.124735729387 64.8390671900254 0 136.642706131078 73.1274532440545 14.543 138.405919661734 74.4511660124683 15.197 0 0 chimp,cow,guinea_pig,human,macaque,marmoset,mouse,orangutan,panda,pig,rabbit,rat, lincRNA lincRNA A549@0.0206215,AG04450@0.0319835,BJ@0.074204,GM12878@0.0694325,H1HESC@5.76099,HELAS3@0.148236,HEPG2@0.0710615,HMEC@0.11258,HSMM@0.009592,HUVEC@0.004258,K562@0.05189,MCF7@0.106342,NHEK@0.11597,NHLF@0.0317445,SKNSHRA@0.209965, 0 0 0 0 ENSG00000229891.1 ENST00000424852.1 chr22:42760531-42765242 2 1140 3569 intergenic 11.85 1 1,1,1 1 0,0,0 197.75 41.4936957130849 0 151.434210526316 59.0762118240404 13.523 148.997368421053 61.0636032502101 14.161 0 0 chimp,elephant,guinea_pig,human,macaque,marmoset,mouse,orangutan,panda,pig,rabbit, lincRNA lincRNA A549@0.0206215,AG04450@0.0319835,BJ@0.074204,GM12878@0.0694325,H1HESC@5.76099,HELAS3@0.148236,HEPG2@0.0710615,HMEC@0.11258,HSMM@0.009592,HUVEC@0.004258,K562@0.05189,MCF7@0.106342,NHEK@0.11597,NHLF@0.0317445,SKNSHRA@0.209965, 0 0 0 0 ENSG00000230107.1 ENST00000428765.1 chr22:42834029-42842201 4 568 7598 intergenic -1.10 0 0,0,0 0 0,0,0 0 2.18689128718084 0 17.2711267605634 3.0709397209792 5.19 17.3767605633803 3.19742037378257 5.145 0 0 chimp,dog,horse,human,macaque,orangutan, lincRNA lincRNA A549@0.008624,AG04450@0,BJ@0,GM12878@2.94219,H1HESC@0.096149,HELAS3@0.0406505,HEPG2@0.03815,HMEC@0.014317,HSMM@0,HUVEC@0,K562@0.004294,MCF7@0,NHEK@0.004616,NHLF@0,SKNSHRA@0.023813, 0 0 0 0 ENSG00000172250.10 ENST00000455578.1 chr22:42896585-42908565 10 1702 10260 exonic 17.14 1 0,1,0 1 0,1,0 0 0 0 46.6609870740305 0.845126705653021 0 116.486486486486 2.42602339181287 0 0 1 chimp,human,macaque,orangutan, antisense retained_intron A549@0.126307,AG04450@0.586982,BJ@0.800053,GM12878@0.086962,H1HESC@1.79257,HELAS3@0.039813,HEPG2@0.268849,HMEC@0.100452,HSMM@0.360845,HUVEC@0.359239,K562@11.8745,MCF7@0.192554,NHEK@0.472026,NHLF@0.45248,SKNSHRA@1.0772, 0 0 0 0 ENSG00000172250.10 ENST00000359906.2 chr22:42896596-42908566 11 1335 10615 exonic 37.90 1 0,1,0 1 0,1,0 0 0 0 56.0883895131086 1.19321714554875 0 145.692883895131 2.62986340084786 0 0 1 chimp,human,macaque,orangutan, antisense antisense A549@0.126307,AG04450@0.586982,BJ@0.800053,GM12878@0.086962,H1HESC@1.79257,HELAS3@0.039813,HEPG2@0.268849,HMEC@0.100452,HSMM@0.360845,HUVEC@0.359239,K562@11.8745,MCF7@0.192554,NHEK@0.472026,NHLF@0.45248,SKNSHRA@1.0772, 0 0 0 0 ENSG00000172250.10 ENST00000421475.2 chr22:42896631-42906658 9 675 9336 exonic 37.90 0 0,1,0 1 0,1,0 0 0 0 102.786666666667 1.35668380462725 0 250.002962962963 2.77859897172236 0 0 0 cat,chimp,cow,dog,horse,human,macaque,mouse,opossum,orangutan,panda,platypus,rabbit,rat, antisense retained_intron A549@0.126307,AG04450@0.586982,BJ@0.800053,GM12878@0.086962,H1HESC@1.79257,HELAS3@0.039813,HEPG2@0.268849,HMEC@0.100452,HSMM@0.360845,HUVEC@0.359239,K562@11.8745,MCF7@0.192554,NHEK@0.472026,NHLF@0.45248,SKNSHRA@1.0772, 0 0 0 0 ENSG00000172250.10 ENST00000434218.1 chr22:42897602-42898659 3 593 460 intergenic 0.50 0 0,0,0 0 0,1,0 0 0 0 82.9021922428331 5.75869565217391 0 167.27150084317 18.5978260869565 0 0 0 chimp,dog,human,macaque,marmoset,orangutan,panda, antisense retained_intron A549@0.126307,AG04450@0.586982,BJ@0.800053,GM12878@0.086962,H1HESC@1.79257,HELAS3@0.039813,HEPG2@0.268849,HMEC@0.100452,HSMM@0.360845,HUVEC@0.359239,K562@11.8745,MCF7@0.192554,NHEK@0.472026,NHLF@0.45248,SKNSHRA@1.0772, 0 0 0 0 ENSG00000182841.7 ENST00000357802.2 chr22:42951229-42978044 8 2367 24434 exonic 51.12 0 0,1,0 1 0,0,0 31.1166032953105 0.165711713186543 0 123.15800591466 2.60415814029631 0 138.386565272497 34.6091921093558 1.554 0 0 chimp,horse,human,macaque,orangutan, antisense antisense A549@4.68765,AG04450@3.85633,BJ@3.467,GM12878@7.22793,H1HESC@10.4394,HELAS3@6.51542,HEPG2@9.99566,HMEC@4.38213,HSMM@4.33374,HUVEC@6.3612,K562@7.63427,MCF7@3.52404,NHEK@6.25567,NHLF@2.82496,SKNSHRA@3.14053, 0 0 0 0 ENSG00000182841.7 ENST00000437211.1 chr22:42965135-42978015 8 1770 11096 intronic 51.12 0 1,1,1 1 0,0,0 41.6118644067797 0.364906272530642 0 137.868361581921 2.86021989906273 2.295 178.766101694915 66.4011355443403 6.014 0 0 chimp,human,macaque,marmoset, antisense antisense A549@4.68765,AG04450@3.85633,BJ@3.467,GM12878@7.22793,H1HESC@10.4394,HELAS3@6.51542,HEPG2@9.99566,HMEC@4.38213,HSMM@4.33374,HUVEC@6.3612,K562@7.63427,MCF7@3.52404,NHEK@6.25567,NHLF@2.82496,SKNSHRA@3.14053, 0 0 0 0 ENSG00000182841.7 ENST00000458605.1 chr22:42969250-42978017 7 2325 6430 exonic 51.12 0 1,1,1 1 0,0,0 31.6787096774194 0.629704510108865 0 109.161290322581 2.3646967340591 1.785 113.798279569892 110.390979782271 5.446 0 0 chimp,horse,human,macaque,marmoset,orangutan,panda, antisense antisense A549@4.68765,AG04450@3.85633,BJ@3.467,GM12878@7.22793,H1HESC@10.4394,HELAS3@6.51542,HEPG2@9.99566,HMEC@4.38213,HSMM@4.33374,HUVEC@6.3612,K562@7.63427,MCF7@3.52404,NHEK@6.25567,NHLF@2.82496,SKNSHRA@3.14053, 0 0 0 0 ENSG00000182841.7 ENST00000421116.1 chr22:42973104-42978003 4 725 4168 intergenic 3.70 0 0,1,0 1 0,0,0 0.684137931034483 0 0 88.5862068965517 1.20273512476008 6.096 88.4537931034483 168.209932821497 9.871 0 0 chimp,guinea_pig,human,macaque,marmoset,orangutan, antisense antisense A549@4.68765,AG04450@3.85633,BJ@3.467,GM12878@7.22793,H1HESC@10.4394,HELAS3@6.51542,HEPG2@9.99566,HMEC@4.38213,HSMM@4.33374,HUVEC@6.3612,K562@7.63427,MCF7@3.52404,NHEK@6.25567,NHLF@2.82496,SKNSHRA@3.14053, 0 0 0 0 ENSG00000248178.1 ENST00000502807.1 chr22:43111862-43116852 2 1379 3609 intergenic -0.63 0 0,0,1 0 0,0,0 12.8252356780276 0 0 0 3.07342754225547 0 2.44162436548223 6.11000277085065 0 0 1 chimp,human,macaque,orangutan, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0.010588,H1HESC@0,HELAS3@0.0038435,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000230319.1 ENST00000443063.1 chr22:43434591-43448372 3 2080 11697 exonic -1.68 1 0,0,1 0 0,0,0 0 4.24108745832265 0 10.2158653846154 7.16961614089083 0 17.3538461538462 11.116012652817 0 0 0 chimp,human,macaque,marmoset,orangutan, antisense antisense A549@0,AG04450@0,BJ@0.001162,GM12878@0,H1HESC@0,HELAS3@0.0036325,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0.0032675, 0 0 0 0 ENSG00000236272.1 ENST00000420269.1 chr22:43608680-43609667 2 529 456 intronic -5.02 0 0,0,0 0 0,0,0 0 0 41.451 0 0 60.262 0 0 83.647 0 0 chimp,cow,elephant,horse,human,macaque, antisense antisense A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000234892.1 ENST00000419643.1 chr22:43628147-43635016 3 985 5880 exonic 2.75 0 0,0,0 0 0,0,0 0 8.45204081632653 29.007 42.7725888324873 4.96326530612245 75.106 55.1827411167513 5.79489795918367 69.407 0 0 chimp,human,macaque,marmoset,opossum,orangutan, antisense antisense A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0.0058915,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0.006214,NHEK@0,NHLF@0,SKNSHRA@0.0074155, 0 0 0 0 ENSG00000203527.2 ENST00000458463.1 chr22:43671961-43679836 2 1949 5924 intronic 4.71 1 0,0,1 0 0,0,0 0 12.8700202565834 0 0 11.4458136394328 0 1.19599794766547 45.1252532072924 0 0 0 chimp,human,macaque,orangutan, antisense antisense A549@0,AG04450@0,BJ@0.006985,GM12878@0,H1HESC@0.054304,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0.009903,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0.003493, 0 0 0 0 ENSG00000236117.1 ENST00000450750.1 chr22:43796337-43805687 4 947 8397 intergenic 1.13 0 0,0,1 0 0,0,0 23.4910242872228 7.38013576277242 0 9.8532206969377 2.81576753602477 2.976 13.9123548046463 5.4269381922115 3.108 0 0 cat,chimp,cow,horse,human,macaque,marmoset,orangutan,rabbit, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0.077297,HELAS3@0.179524,HEPG2@0.196328,HMEC@0,HSMM@0,HUVEC@0,K562@0.0105135,MCF7@0.004228,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000223843.1 ENST00000431327.1 chr22:43912134-43932485 3 1994 18353 exonic 3.32 0 0,0,0 0 0,0,0 2.53761283851555 3.12608292922138 0 2.32397191574724 6.02184928894459 0 2.69959879638917 8.16062769029586 0 0 0 chimp,elephant,human,macaque,marmoset,orangutan,panda, antisense antisense A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0.0046815,HEPG2@0,HMEC@0.016403,HSMM@0,HUVEC@0,K562@0,MCF7@0.0020135,NHEK@0.005236,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000232655.1 ENST00000415702.1 chr22:44839207-44840668 3 627 830 intergenic -1.36 1 0,0,0 0 0,0,0 0 0 0 0 0 0 0 0 0 0 0 chimp,human,macaque,marmoset,orangutan, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0.008828, 0 0 0 0 ENSG00000234300.1 ENST00000443783.1 chr22:45002819-45021299 4 496 17978 intergenic 0.54 0 0,0,1 0 0,0,0 0 0 0 30.2439516129032 1.1449549449327 0 30.3467741935484 1.14412059183446 0 0 0 chimp,cow,dog,human,macaque,marmoset,orangutan,pig, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000230922.1 ENST00000424580.1 chr22:45396446-45399500 3 1630 1420 intronic 9.13 0 0,0,0 0 0,0,0 0 0 0 0.938650306748466 0 0 8.96625766871166 0 0 0 0 chimp,horse,human,macaque, sense_intronic sense_intronic A549@0.015871,AG04450@0.003545,BJ@0,GM12878@0.0035815,H1HESC@3.27142,HELAS3@0.0063715,HEPG2@0.003541,HMEC@0.002507,HSMM@0.0015475,HUVEC@0,K562@0,MCF7@0.028506,NHEK@0,NHLF@0.00246,SKNSHRA@0.0978785, 0 0 0 0 ENSG00000226328.1 ENST00000426282.1 chr22:45529710-45559662 3 1264 28684 intergenic 3.34 0 0,1,0 1 0,0,0 0 1.09120066936271 20.16 0 0.81487937526147 21.77 0 1.340712592386 26.278 0 0 human,marmoset,orangutan, lincRNA processed_transcript A549@2.0534,AG04450@1.82142,BJ@2.49549,GM12878@2.37556,H1HESC@3.85738,HELAS3@2.198,HEPG2@2.3735,HMEC@3.29695,HSMM@2.77939,HUVEC@2.20463,K562@1.28562,MCF7@2.72643,NHEK@7.00331,NHLF@2.20903,SKNSHRA@3.23852, 0 0 0 0 ENSG00000226328.1 ENST00000432502.1 chr22:45530171-45559540 2 594 28773 intergenic 3.34 1 1,1,1 1 0,0,0 0 1.08782539186042 20.16 0 0.81235880860529 21.77 0 1.33656553018455 26.278 0 0 human,orangutan, lincRNA processed_transcript A549@2.0534,AG04450@1.82142,BJ@2.49549,GM12878@2.37556,H1HESC@3.85738,HELAS3@2.198,HEPG2@2.3735,HMEC@3.29695,HSMM@2.77939,HUVEC@2.20463,K562@1.28562,MCF7@2.72643,NHEK@7.00331,NHLF@2.20903,SKNSHRA@3.23852, 0 0 0 0 ENSG00000232363.1 ENST00000454439.1 chr22:45831744-45844624 2 543 12335 intergenic -6.07 0 0,0,0 0 0,0,0 0 2.72233481961897 0 1.06445672191529 3.50060802594244 0 1.06445672191529 4.22821240372923 0 0 0 chimp,cow,dog,horse,human,macaque,marmoset,orangutan,pig,rabbit, antisense antisense A549@0,AG04450@0,BJ@0.0134755,GM12878@0,H1HESC@0,HELAS3@0.0048695,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0.014201,SKNSHRA@0, 0 0 0 0 ENSG00000238120.1 ENST00000422971.1 chr22:46000312-46001501 2 546 641 intergenic 5.74 1 0,1,1 0 0,0,0 0 0 0 0 6.33853354134165 0 0 6.44461778471139 0 0 0 human,macaque,orangutan, antisense antisense A549@4.11912,AG04450@0,BJ@0,GM12878@0.033942,H1HESC@0.0337785,HELAS3@0.117293,HEPG2@0.0547605,HMEC@0.156911,HSMM@0,HUVEC@0,K562@0.008474,MCF7@0,NHEK@0.447301,NHLF@0,SKNSHRA@0.029032, 0 0 0 0 ENSG00000235091.1 ENST00000451118.1 chr22:46271879-46283628 3 802 10943 intergenic 0 0 0,1,0 0 0,0,0 0 9.84492369551311 0 10.14463840399 8.80361875171342 31.484 10.1745635910224 9.3130768527826 31.89 0 0 chimp,human,macaque,marmoset,orangutan, lincRNA lincRNA A549@0.005393,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0.010103,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000231711.1 ENST00000421538.1 chr22:46436146-46440490 3 2581 1759 intergenic 3.49 0 0,1,1 0 0,0,0 2.77799302595893 2.8533257532689 66.682 0 1.6304718590108 35.83 1.41224331654398 1.76691301876066 36.92 0 0 chimp,human,macaque,marmoset,orangutan, lincRNA processed_transcript A549@0.0022705,AG04450@0.161928,BJ@1.49064,GM12878@0,H1HESC@0.405152,HELAS3@2.87553,HEPG2@0.170375,HMEC@0.099684,HSMM@0.30409,HUVEC@0.530888,K562@0,MCF7@0.000778,NHEK@0.15363,NHLF@0.283877,SKNSHRA@0.047306, 0 0 0 0 ENSG00000231711.1 ENST00000444890.1 chr22:46436889-46440733 4 489 3349 intergenic 1.60 0 0,1,1 1 0,0,0 151.026584867076 1.49865631531801 0 60.5930470347648 0.856375037324575 6.2 59.8568507157464 0.928038220364288 7.65 0 0 chimp,dog,elephant,human,macaque,marmoset,orangutan,panda, lincRNA processed_transcript A549@0.0022705,AG04450@0.161928,BJ@1.49064,GM12878@0,H1HESC@0.405152,HELAS3@2.87553,HEPG2@0.170375,HMEC@0.099684,HSMM@0.30409,HUVEC@0.530888,K562@0,MCF7@0.000778,NHEK@0.15363,NHLF@0.283877,SKNSHRA@0.047306, 0 0 0 0 ENSG00000241990.1 ENST00000451166.1 chr22:46450340-46453090 4 873 1871 intronic 2.11 1 1,1,1 0 0,0,0 6.7709049255441 112.000534473544 238.667 1.49484536082474 51.4687332977018 251.028 1.52462772050401 53.7135221806521 250.007 0 0 chimp,dog,elephant,horse,human,macaque,orangutan, processed_transcript processed_transcript A549@2.64619,AG04450@1.08273,BJ@0.967441,GM12878@0,H1HESC@0.135217,HELAS3@1.42688,HEPG2@0.369663,HMEC@0.946477,HSMM@0.892459,HUVEC@1.53568,K562@0,MCF7@0.726247,NHEK@2.2214,NHLF@0.430438,SKNSHRA@0.666034, 0 0 0 0 ENSG00000241990.1 ENST00000445441.1 chr22:46450795-46453090 3 284 2007 intronic 2.11 1 0,0,1 0 0,0,0 20.8133802816901 104.411061285501 59.745 4.59507042253521 47.9810662680618 90.781 4.68661971830986 50.0737419033383 88.852 0 0 cat,chimp,human,macaque,marmoset,orangutan, processed_transcript processed_transcript A549@2.64619,AG04450@1.08273,BJ@0.967441,GM12878@0,H1HESC@0.135217,HELAS3@1.42688,HEPG2@0.369663,HMEC@0.946477,HSMM@0.892459,HUVEC@1.53568,K562@0,MCF7@0.726247,NHEK@2.2214,NHLF@0.430438,SKNSHRA@0.666034, 0 0 0 0 ENSG00000231010.1 ENST00000439423.1 chr22:46451620-46454040 2 1179 1239 intronic 7.09 1 0,0,0 0 0,0,0 99.3596268023749 118.47619047619 77.315 50.6700593723494 50.1977401129943 3.036 50.2205258693808 54.3785310734463 3.124 0 0 chimp,dog,guinea_pig,horse,human,macaque,marmoset,orangutan, lincRNA lincRNA A549@0,AG04450@0,BJ@0.098798,GM12878@0.007201,H1HESC@0,HELAS3@0.34311,HEPG2@0.122413,HMEC@0.02427,HSMM@0.049062,HUVEC@0.0100795,K562@0,MCF7@0,NHEK@0.0138487,NHLF@0.083049,SKNSHRA@0.0933245, 0 0 0 0 ENSG00000235159.1 ENST00000412643.1 chr22:46463236-46465771 3 864 1667 intronic 0.35 0 0,1,0 0 0,0,0 78.2233796296296 86.8818236352729 140.47 63.3159722222222 106.499700059988 124.827 62.7523148148148 110.569286142771 124.848 0 0 chimp,dog,elephant,guinea_pig,horse,human,macaque,marmoset,orangutan,panda,rat, antisense antisense A549@0.18735,AG04450@0.0621295,BJ@0.085283,GM12878@0,H1HESC@0.068951,HELAS3@0.898861,HEPG2@0.41215,HMEC@0.417699,HSMM@0.133464,HUVEC@0.245804,K562@0.0031435,MCF7@0.326695,NHEK@0.112175,NHLF@0.0893955,SKNSHRA@0.449491, 0 0 0 0 ENSG00000247670.1 ENST00000499161.1 chr22:46646274-46648542 2 2012 254 exonic 1.21 0 1,1,1 1 0,0,0 0 0 0 0 0 0 0 0 0 0 1 chimp,human,marmoset, lincRNA lincRNA A549@0.308151,AG04450@0.423059,BJ@0.286993,GM12878@0.433451,H1HESC@0.468848,HELAS3@0.452444,HEPG2@0.468534,HMEC@0.305864,HSMM@0.389246,HUVEC@0.291421,K562@1.11206,MCF7@0.489383,NHEK@0.215539,NHLF@0.517993,SKNSHRA@1.06596, 0 0 0 0 ENSG00000234869.1 ENST00000426112.1 chr22:46937392-46944093 2 2947 3752 intergenic 3.46 0 0,0,1 0 0,0,0 0 0 0 5.76823888700373 1.92563965884861 0 6.53478113335595 1.99893390191898 0 0 0 chimp,horse,human,macaque,marmoset,orangutan, antisense antisense A549@0.190313,AG04450@0.00914,BJ@0.039263,GM12878@0.0104965,H1HESC@0.0545805,HELAS3@0.177474,HEPG2@0.105659,HMEC@0.133432,HSMM@0.0638815,HUVEC@0.0308925,K562@0,MCF7@0.492192,NHEK@0.179777,NHLF@0.005293,SKNSHRA@0.202782, 0 0 0 0 ENSG00000249879.1 ENST00000502868.1 chr22:46999595-47003264 2 3281 386 intronic 2.95 0 0,0,1 0 0,0,0 0 0 0 0 0 0 66.6202377323986 85.0284974093264 0 0 0 human, lincRNA lincRNA A549@0.026708,AG04450@0.00905,BJ@0.00298,GM12878@0.0842795,H1HESC@0.036374,HELAS3@0.105661,HEPG2@0.169984,HMEC@0.011793,HSMM@0.0008865,HUVEC@0.027827,K562@0.065782,MCF7@0.435833,NHEK@0.0928663,NHLF@0.0142355,SKNSHRA@0.0140765, 0 0 0 0 ENSG00000224715.1 ENST00000434707.1 chr22:47741319-47769291 4 4360 23606 intergenic 5.17 1 0,0,0 0 0,0,0 4.72155963302752 4.78454630178768 0 7.26674311926605 4.829195967127 0 7.99151376146789 5.75514699652631 55.314 0 0 human,macaque,marmoset, lincRNA lincRNA A549@0.005106,AG04450@0.03606,BJ@0,GM12878@0.029461,H1HESC@0.0040295,HELAS3@0.01888,HEPG2@0,HMEC@0,HSMM@0.0010445,HUVEC@0.0022285,K562@0.028483,MCF7@0,NHEK@0,NHLF@0.007154,SKNSHRA@0.004161, 0 0 0 0 ENSG00000205634.1 ENST00000380990.1 chr22:48016792-48027318 6 4179 6337 intergenic 5.69 0 0,0,0 0 0,0,0 4.42211055276382 13.0571248224712 0 0 20.0378728104781 0 1.33165829145729 19.2472778917469 0 0 0 horse,human,macaque,marmoset,orangutan, lincRNA processed_transcript A549@0.00132,AG04450@0,BJ@0.006186,GM12878@0.017603,H1HESC@0,HELAS3@0.0009975,HEPG2@0,HMEC@0,HSMM@0.007152,HUVEC@0,K562@0.0154705,MCF7@0.110569,NHEK@0.004052,NHLF@0,SKNSHRA@0.139592, 0 0 0 0 ENSG00000224271.1 ENST00000423737.1 chr22:48027423-48251349 9 1806 222104 intergenic 3.35 0 0,1,0 1 0,0,0 7.35437430786268 3.61493714656197 0 2.76688815060908 4.19711486510824 0 3.96622369878184 26.6074316536397 0 0 0 human,macaque, lincRNA processed_transcript A549@0.0253015,AG04450@0,BJ@0,GM12878@0.688846,H1HESC@0.0128765,HELAS3@0.0065015,HEPG2@0.0067075,HMEC@0,HSMM@0,HUVEC@0.0029425,K562@2.12816,MCF7@1.0718,NHEK@0.662643,NHLF@0,SKNSHRA@0.816976, 0 0 0 0 ENSG00000224271.1 ENST00000426452.1 chr22:48027439-48031373 2 640 3292 intergenic -6.29 0 0,1,0 1 0,0,0 0 18.6992709599028 0 0 18.176184690158 0 0 18.5959902794654 0 0 0 chimp,dog,human,macaque,marmoset,orangutan, lincRNA retained_intron A549@0.0253015,AG04450@0,BJ@0,GM12878@0.688846,H1HESC@0.0128765,HELAS3@0.0065015,HEPG2@0.0067075,HMEC@0,HSMM@0,HUVEC@0.0029425,K562@2.12816,MCF7@1.0718,NHEK@0.662643,NHLF@0,SKNSHRA@0.816976, 0 0 0 0 ENSG00000224271.1 ENST00000438810.1 chr22:48081990-48086596 5 580 4018 intergenic -1.41 0 0,1,0 0 0,0,0 3.56896551724138 2.86212045793927 0 4.53448275862069 13.3733200597312 0 8.14137931034483 14.1261821801891 0 0 0 chimp,human,macaque,marmoset,orangutan, lincRNA processed_transcript A549@0.0253015,AG04450@0,BJ@0,GM12878@0.688846,H1HESC@0.0128765,HELAS3@0.0065015,HEPG2@0.0067075,HMEC@0,HSMM@0,HUVEC@0.0029425,K562@2.12816,MCF7@1.0718,NHEK@0.662643,NHLF@0,SKNSHRA@0.816976, 0 0 0 0 ENSG00000230345.1 ENST00000449941.1 chr22:48256420-48257811 2 217 1172 intergenic -7.38 0 0,0,0 0 0,0,0 0 0 0 0 0 0 0 0 0 0 0 chimp,cow,elephant,horse,human,macaque,marmoset,orangutan, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0.0276145,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0.122762,MCF7@0,NHEK@0.0361703,NHLF@0,SKNSHRA@0.0814725, 0 0 0 0 ENSG00000235154.1 ENST00000457518.1 chr22:48440527-48444366 2 370 3467 intergenic 9.28 0 0,1,1 0 0,0,0 0 0 18.48 27.6486486486486 0 40.25 28.2891891891892 0 45.993 0 0 cat,chimp,elephant,horse,human,macaque,orangutan,panda, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0.026561,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000238192.1 ENST00000414483.1 chr22:48535278-48536818 2 496 1042 intergenic -8.04 0 0,0,1 0 0,0,0 0 0 0 0 0 0 0 0 0 0 0 chimp,human,macaque,marmoset,orangutan, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0.0041285,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000229275.1 ENST00000446364.1 chr22:48537359-48539046 4 664 1017 intergenic 1.16 0 0,0,0 0 0,0,0 0 0 0 0 0 0 0 0 0 0 0 chimp,human,macaque,orangutan, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0.0060355,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000233179.1 ENST00000453866.1 chr22:48844702-48847029 2 566 1759 intergenic 4.46 0 0,1,0 0 0,0,0 0 6.50369528140989 0 0 40.3069926094372 0 0.429328621908127 50.9516770892553 18.73 0 0 chimp,human,macaque,marmoset,orangutan, lincRNA lincRNA A549@0,AG04450@0,BJ@0.01719,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000205632.2 ENST00000380981.2 chr22:49288729-49294198 4 3422 2041 intergenic 17.51 1 0,0,1 0 0,0,0 0 0 0 0 0 0 0 114.203821656051 0 0 0 human,orangutan, lincRNA lincRNA A549@0.0016125,AG04450@0,BJ@0,GM12878@0,H1HESC@0.220663,HELAS3@0.0365505,HEPG2@0.131169,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0.0018005,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000212939.2 ENST00000391625.2 chr22:49942329-49950121 2 3892 3898 intergenic 13.01 0 0,0,1 0 0,0,0 0 0 0 0 0 0 0 0 16.165 0 0 human,orangutan, antisense antisense A549@0,AG04450@0,BJ@0,GM12878@0.001364,H1HESC@0.024263,HELAS3@0.001363,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0.019041,NHEK@0,NHLF@0,SKNSHRA@0.001428, 0 0 0 0 ENSG00000213279.2 ENST00000393264.2 chr22:49965912-49969074 2 2377 783 intergenic 4.57 0 0,0,1 0 0,0,0 0 102.045977011494 0 0 76.3039591315453 0 0 165.779054916986 0 0 0 human,orangutan, sense_intronic sense_intronic A549@0,AG04450@0,BJ@0,GM12878@0.071519,H1HESC@0,HELAS3@0,HEPG2@0.002463,HMEC@0,HSMM@0,HUVEC@0.23282,K562@0.079593,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000235111.1 ENST00000420902.1 chr22:50006305-50009364 2 2973 84 intergenic 5.93 0 0,0,1 0 0,0,0 0 0 0 3.00706357214934 0 0 3.22805247225025 0 32.75 0 0 human,macaque,orangutan, sense_intronic sense_intronic A549@0.0011335,AG04450@0.000995,BJ@0,GM12878@0.118211,H1HESC@0.001151,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0.349193,K562@0.177214,MCF7@0,NHEK@0,NHLF@0.000656,SKNSHRA@0, 0 0 0 0 ENSG00000226954.1 ENST00000447372.1 chr22:50111701-50118154 2 3773 2678 intergenic 2.04 0 0,0,1 0 0,0,0 0.608534322820037 0 0 7.82109727007686 0 0 9.2987012987013 0 0 0 0 chimp,human, lincRNA processed_transcript A549@0,AG04450@0,BJ@0.003791,GM12878@0.017439,H1HESC@0.008329,HELAS3@0.001238,HEPG2@0.013665,HMEC@0.013016,HSMM@0,HUVEC@0.0015765,K562@0.0036905,MCF7@0.074722,NHEK@0.00309633,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000248043.1 ENST00000499173.1 chr22:50295451-50298224 5 2206 559 exonic 11.39 0 0,0,0 0 0,0,0 4.94650951949229 0 0 34.0811423390752 0 0 52.4505893019039 0 0 1 1 chimp,human,macaque,marmoset,orangutan, lincRNA lincRNA A549@0.098148,AG04450@0.382198,BJ@0.355427,GM12878@2.03505,H1HESC@3.56052,HELAS3@3.50942,HEPG2@2.77954,HMEC@0.094449,HSMM@0.661465,HUVEC@1.02337,K562@1.63415,MCF7@0.822723,NHEK@1.68271,NHLF@0.101068,SKNSHRA@1.3779, 0 0 0 0 ENSG00000227484.1 ENST00000453835.1 chr22:50753060-50754437 2 529 846 exonic 4.67 0 0,1,0 1 0,0,0 0 0 45.279 177.568998109641 23.7600472813239 144.733 211.59168241966 30.1631205673759 165.166 0 0 cat,chimp,cow,dog,guinea_pig,horse,human,macaque,marmoset,mouse,opossum,orangutan,panda,rabbit,rat, antisense antisense A549@0,AG04450@0.0232955,BJ@0.016825,GM12878@0.344522,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0.004293,HUVEC@0.004579,K562@0.0965525,MCF7@0.003786,NHEK@0,NHLF@0.007349,SKNSHRA@0, 0 0 0 0 ENSG00000226738.1 ENST00000434237.1 chr22:50984844-50986081 2 155 1080 intergenic 0 0 0,0,1 0 0,0,0 0 0 35.641 0 10.1055555555556 46.122 15.6129032258065 8.43796296296296 53.173 0 0 chimp,horse,human,marmoset,orangutan,rabbit,rat, antisense antisense A549@0.0214815,AG04450@0,BJ@0.022789,GM12878@0,H1HESC@0,HELAS3@0.0769845,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0.0128055,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000205559.3 ENST00000380711.3 chr22:51021455-51022306 2 576 273 intergenic 6.21 0 0,0,1 1 0,0,0 0 0 136.592 0 0 124.462 0 0 124.653 1 1 chimp,human,macaque,marmoset,orangutan, antisense antisense A549@0.440953,AG04450@0.414816,BJ@0.36774,GM12878@0.295803,H1HESC@0.574673,HELAS3@0.581258,HEPG2@0.657084,HMEC@0.694244,HSMM@0.791282,HUVEC@0.299976,K562@0.28479,MCF7@0.19667,NHEK@0.448856,NHLF@0.305544,SKNSHRA@0.733495, 0 0 0 0 ENSG00000225929.1 ENST00000449652.1 chr22:51174253-51176567 2 2028 284 intergenic 0.53 1 0,1,0 0 0,0,0 0 0 0 0 0 36.584 0 0 36.221 0 0 chimp,horse,human,macaque,marmoset,orangutan,panda, antisense antisense A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0.0160065,SKNSHRA@0, 0 0 0 0 ENSG00000254499.1 ENST00000532913.1 chr22:51179021-51181948 2 282 2643 exonic 0 0 0,0,0 0 0,0,0 0 5.91562618236852 14.649 0 0 35.685 0 0 23.817 0 0 chimp,elephant,human,macaque,marmoset,orangutan, antisense antisense A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0.0095975,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000223587.1 ENST00000440867.1 chr3:65431-66175 2 588 154 intergenic -1.85 1 0,0,0 0 0,0,0 0 0 0 0 0 0 0 0 0 0 0 chimp,human,macaque,marmoset,orangutan,panda, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000224918.1 ENST00000426697.1 chr3:95031-96029 2 397 599 intergenic 0.18 0 0,0,1 0 0,0,0 225.090680100756 84.2353923205342 0 103.639798488665 92.6260434056761 0 91.2317380352645 76.2654424040067 0 0 0 cat,chimp,cow,dog,elephant,guinea_pig,horse,human,macaque,marmoset,mouse,opossum,orangutan,panda,rat, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000224318.1 ENST00000451839.1 chr3:237441-238542 4 504 591 exonic -2.39 1 0,0,1 0 0,0,0 13.7519841269841 27.8307952622673 18.17 55.4722222222222 4.56852791878173 32.846 58.265873015873 4.70389170896785 36.686 0 0 cat,chimp,cow,guinea_pig,horse,human,macaque,marmoset,mouse,orangutan,panda,pig,rat, antisense retained_intron A549@0,AG04450@0,BJ@0,GM12878@0.023112,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000224318.1 ENST00000444879.1 chr3:237441-238882 4 484 951 exonic -2.39 1 1,1,1 0 0,0,0 0 24.583596214511 43.05 23.698347107438 22.3890641430074 53.74 25.5578512396694 23.1335436382755 59.719 0 0 chimp,human,macaque,marmoset,orangutan, antisense antisense A549@0,AG04450@0,BJ@0,GM12878@0.023112,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000224318.1 ENST00000452919.1 chr3:237441-239024 5 721 854 exonic -2.39 1 0,0,1 0 0,0,0 0 27.3758782201405 43.05 15.9084604715673 24.9320843091335 53.74 17.1567267683773 25.7611241217799 59.719 0 0 chimp,dog,human,macaque,marmoset,orangutan, antisense antisense A549@0,AG04450@0,BJ@0,GM12878@0.023112,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000234661.1 ENST00000417612.1 chr3:405053-427478 3 910 21511 exonic 1.03 1 0,0,0 0 0,0,0 45.5736263736264 6.7642136581284 0 25.321978021978 5.69215750081354 0 38.1439560439561 7.15410720096695 1.757 0 0 chimp,elephant,guinea_pig,horse,human,macaque,marmoset,orangutan,panda,pig, antisense antisense A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000224957.1 ENST00000420823.1 chr3:577914-887698 5 3943 305833 intergenic 4.13 0 0,1,0 0 0,0,0 25.6758813086482 14.178636706961 0 7.20618818158762 11.087531430552 0 11.3413644433173 14.2705430741614 0 0 0 chimp,dog,guinea_pig,horse,human,macaque,marmoset,mouse,opossum,orangutan, lincRNA processed_transcript A549@0,AG04450@0.006702,BJ@0.0006235,GM12878@0,H1HESC@0.0038895,HELAS3@0.219801,HEPG2@0.0214185,HMEC@0,HSMM@0.005789,HUVEC@0,K562@0.000622,MCF7@0.017395,NHEK@0.0187023,NHLF@0.0452215,SKNSHRA@0.080419, 0 0 0 0 ENSG00000224957.1 ENST00000442809.1 chr3:577936-884327 5 581 305802 intergenic 0.11 0 0,1,0 0 0,0,0 37.2289156626506 14.180074034833 0 20.5180722891566 11.0886554044774 0 20.2650602409639 14.2719897188377 0 0 0 chimp,dog,human,marmoset,mouse,orangutan,rat, lincRNA processed_transcript A549@0,AG04450@0.006702,BJ@0.0006235,GM12878@0,H1HESC@0.0038895,HELAS3@0.219801,HEPG2@0.0214185,HMEC@0,HSMM@0.005789,HUVEC@0,K562@0.000622,MCF7@0.017395,NHEK@0.0187023,NHLF@0.0452215,SKNSHRA@0.080419, 0 0 0 0 ENSG00000224239.1 ENST00000423193.1 chr3:898807-899774 2 495 470 intergenic 4.05 0 0,0,0 0 0,0,0 0 0 0 0 0 0 0 0 198.744 0 0 chimp,human,macaque,marmoset,orangutan, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0.0246315,HEPG2@0,HMEC@0.008239,HSMM@0,HUVEC@0.0097845,K562@0,MCF7@0,NHEK@0.0156747,NHLF@0.019586,SKNSHRA@0.066861, 154 2 0 0 ENSG00000235158.1 ENST00000451707.1 chr3:1049819-1054618 2 3697 1100 intergenic 1.21 0 0,1,0 0 0,0,0 0 33.1854545454545 0 1.31214498241818 14.9654545454545 0 2.38896402488504 29.9136363636364 0 0 0 chimp,human,macaque,orangutan, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0.0012215,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000225044.1 ENST00000418972.1 chr3:2004065-2029154 2 355 24732 intergenic -4.37 0 0,0,1 0 0,0,0 118.242253521127 10.2304706453178 0 51.6704225352113 12.2990053372149 2.805 44.1154929577465 14.2869966035905 2.915 0 0 cat,chimp,cow,dog,elephant,guinea_pig,horse,human,macaque,marmoset,mouse,orangutan,panda, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0.00748,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000227588.2 ENST00000447256.2 chr3:2152093-2185925 3 423 33405 intronic 2.43 1 0,1,0 0 0,0,0 5.07311320754717 22.5834331217818 11.44 0 9.21180098191833 8.898 0 11.357202730212 2.89 0 0 chimp,cow,elephant,horse,human,macaque,marmoset,orangutan,panda, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000237990.1 ENST00000442749.1 chr3:3081345-3102829 4 1008 20470 exonic -2.32 0 0,0,0 0 0,0,0 128.097222222222 76.2203224230581 0 122.25496031746 55.0876893014167 0 130.858134920635 55.6594040058622 1.39 0 0 chimp,cow,dog,elephant,guinea_pig,human,macaque,marmoset,mouse,opossum,orangutan,panda,pig,rat, antisense antisense A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0.002246, 0 0 0 0 ENSG00000223727.2 ENST00000420000.2 chr3:3292371-3668980 5 554 376047 intergenic 0 0 0,0,0 0 0,0,0 0 10.3672379635416 59.319 0 6.53589596989721 30.349 1.55935251798561 9.09480780225771 39.35 0 0 cat,chimp,cow,elephant,guinea_pig,human,macaque,marmoset,mouse,orangutan,rat, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0.002769,H1HESC@0,HELAS3@0.007467,HEPG2@0.0068185,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0.011459, 0 0 0 0 ENSG00000223727.2 ENST00000451031.1 chr3:3302491-3525799 6 604 222694 intergenic 5.51 0 0,0,0 0 0,0,0 0 10.0900967246536 0 7.59933774834437 7.12323187872147 6.62 0 9.60514427869633 10.416 0 0 cat,chimp,dog,horse,human,macaque,marmoset,orangutan,panda,pig, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0.002769,H1HESC@0,HELAS3@0.007467,HEPG2@0.0068185,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0.011459, 0 0 0 0 ENSG00000223727.2 ENST00000455703.1 chr3:3356990-3525781 4 724 168061 intergenic 0.04 0 0,0,1 0 0,0,0 0 7.80823034493428 0 6.33977900552486 5.46153479986433 6.62 1.1975138121547 7.99751875806999 10.416 0 0 cat,chimp,cow,dog,guinea_pig,horse,human,macaque,marmoset,mouse,orangutan,panda,rat, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0.002769,H1HESC@0,HELAS3@0.007467,HEPG2@0.0068185,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0.011459, 0 0 0 0 ENSG00000231249.1 ENST00000412804.1 chr3:4532575-4534847 2 856 1414 intergenic -2.82 0 1,1,1 1 0,0,0 66.3551401869159 27.5961810466761 294.799 54.7184579439252 35.5374823196605 229.098 70.5630841121495 39.6294200848656 201.494 0 0 cat,chimp,cow,dog,guinea_pig,horse,human,macaque,marmoset,orangutan,panda,pig,rat, antisense antisense A549@0.0574945,AG04450@0.0562265,BJ@0.0595,GM12878@0.406745,H1HESC@0.407795,HELAS3@1.21047,HEPG2@1.4077,HMEC@0.191839,HSMM@0.081725,HUVEC@0.115264,K562@1.04198,MCF7@0.974078,NHEK@0.0605557,NHLF@0.0541495,SKNSHRA@0.563413, 0 0 0 0 ENSG00000235947.1 ENST00000414938.1 chr3:4790876-4793274 2 1462 934 intronic 0.87 1 1,1,1 0 0,1,0 25.3187414500684 254.983940042827 97.033 9.72366621067031 222.763383297645 27.341 8.92202462380301 301.942184154176 62.537 0 0 cat,chimp,dog,horse,human,macaque,marmoset,orangutan,panda, lincRNA non_coding A549@0.180002,AG04450@0.013215,BJ@0,GM12878@2.86572,H1HESC@0,HELAS3@0,HEPG2@0.0315365,HMEC@0.002797,HSMM@0.005622,HUVEC@0.439819,K562@0.0036575,MCF7@0.0082395,NHEK@0.422899,NHLF@0.001333,SKNSHRA@0.067838, 0 0 0 0 ENSG00000235831.2 ENST00000420832.1 chr3:4938493-5021646 4 2352 80795 exonic -3.12 0 1,1,1 0 0,0,0 9.41326530612245 18.9096478742496 173.012 11.4893707482993 17.0332198774677 146.358 12.9417517006803 17.8788662664769 155.15 0 0 chimp,human,macaque,marmoset,orangutan, lincRNA processed_transcript A549@0.193565,AG04450@0.069359,BJ@0.148369,GM12878@0.506993,H1HESC@0.111262,HELAS3@0.295701,HEPG2@0.13197,HMEC@0.041643,HSMM@0.134913,HUVEC@0.105987,K562@0.133467,MCF7@0.069064,NHEK@0.0460937,NHLF@0.06371,SKNSHRA@0.178904, 0 0 0 0 ENSG00000235831.2 ENST00000434530.1 chr3:4938493-5021646 3 2213 80936 exonic -3.12 0 1,1,1 0 0,0,0 6.26299141436963 18.9790081051695 173.012 12.2110257568911 17.0035460116635 146.358 13.7546317216448 17.8477191855293 155.15 0 0 chimp,human,macaque,marmoset,orangutan, lincRNA processed_transcript A549@0.193565,AG04450@0.069359,BJ@0.148369,GM12878@0.506993,H1HESC@0.111262,HELAS3@0.295701,HEPG2@0.13197,HMEC@0.041643,HSMM@0.134913,HUVEC@0.105987,K562@0.133467,MCF7@0.069064,NHEK@0.0460937,NHLF@0.06371,SKNSHRA@0.178904, 0 0 0 0 ENSG00000235831.2 ENST00000438479.1 chr3:4939910-4948186 3 991 7281 intergenic 0.41 0 0,0,0 0 0,0,0 26.9687184661958 13.499244609257 0 31.058526740666 22.8741931053427 0 36.56912209889 26.9453371789589 0 0 0 cat,chimp,cow,dog,elephant,horse,human,macaque,marmoset,orangutan,panda,pig, lincRNA processed_transcript A549@0.193565,AG04450@0.069359,BJ@0.148369,GM12878@0.506993,H1HESC@0.111262,HELAS3@0.295701,HEPG2@0.13197,HMEC@0.041643,HSMM@0.134913,HUVEC@0.105987,K562@0.133467,MCF7@0.069064,NHEK@0.0460937,NHLF@0.06371,SKNSHRA@0.178904, 0 0 0 0 ENSG00000235831.2 ENST00000441386.2 chr3:4940364-5021622 3 554 80700 exonic 0.41 0 0,1,0 0 0,0,0 73.1279279279279 18.7035650999393 173.012 46.2108108108108 16.820171253671 408.677 44.6216216216216 17.6585831299025 154.407 0 0 chimp,elephant,human,macaque,marmoset,orangutan,panda,pig, lincRNA processed_transcript A549@0.193565,AG04450@0.069359,BJ@0.148369,GM12878@0.506993,H1HESC@0.111262,HELAS3@0.295701,HEPG2@0.13197,HMEC@0.041643,HSMM@0.134913,HUVEC@0.105987,K562@0.133467,MCF7@0.069064,NHEK@0.0460937,NHLF@0.06371,SKNSHRA@0.178904, 0 0 0 0 ENSG00000233912.1 ENST00000439325.1 chr3:5198590-5229014 4 668 29750 intronic 0.15 0 1,1,1 1 0,0,0 0 43.7652773109244 99.845 0 30.1926386554622 248.986 6.18413173652695 34.828974789916 237.094 0 0 chimp,dog,elephant,horse,human,macaque,orangutan, antisense antisense A549@0.298521,AG04450@0.081501,BJ@0.135089,GM12878@0.688044,H1HESC@0.125665,HELAS3@0.225504,HEPG2@0.367226,HMEC@0.085305,HSMM@0.155979,HUVEC@0.061491,K562@1.92673,MCF7@0.102285,NHEK@0.051056,NHLF@0.127144,SKNSHRA@0.230719, 0 0 0 0 ENSG00000230944.1 ENST00000443087.1 chr3:5297220-5298446 2 583 641 intergenic -4.47 0 0,0,0 0 0,0,0 0 40.2371294851794 0 0 0 0 0 0 0 0 0 cat,chimp,human,marmoset,orangutan,pig, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000229642.1 ENST00000425894.1 chr3:6004529-6165807 3 464 160810 intergenic 0 0 0,1,0 0 0,0,0 0 4.81718176730303 0 31.0862068965517 8.70742491138611 0 32.6939655172414 9.62139792301474 0 0 0 cat,chimp,cow,dog,elephant,guinea_pig,horse,human,macaque,marmoset,mouse,orangutan,pig,rat, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0.258493,H1HESC@0,HELAS3@0,HEPG2@0.0186355,HMEC@0,HSMM@0,HUVEC@0,K562@0.0267725,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000226022.1 ENST00000435651.1 chr3:6190171-6407572 3 296 217101 intergenic 1.58 0 0,0,0 0 0,0,0 0 2.52199667435894 0 0 5.07094854468658 0 0 6.40445230560891 0 0 0 chimp,horse,marmoset,orangutan, processed_transcript processed_transcript A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000189229.10 ENST00000433639.1 chr3:6532166-6777816 5 1078 244564 intergenic 0.24 0 0,1,0 0 0,0,0 0 3.45438412848988 0 4.25788497217069 5.44459119085393 0 4.5417439703154 7.70660849511784 0 0 0 cat,chimp,cow,dog,elephant,guinea_pig,horse,human,macaque,marmoset,mouse,orangutan,panda,pig,rabbit,rat, lincRNA processed_transcript A549@0.008397,AG04450@0.206965,BJ@0.0323625,GM12878@0.438217,H1HESC@0.475954,HELAS3@5.18228,HEPG2@2.12925,HMEC@0,HSMM@0,HUVEC@0.106369,K562@20.5757,MCF7@0,NHEK@0.00676733,NHLF@0,SKNSHRA@0.243814, 0 0 0 0 ENSG00000189229.10 ENST00000414438.1 chr3:6532421-6625777 3 758 92594 intergenic -2.41 0 0,1,0 0 0,0,0 0 4.83308853705424 0 0 7.19678380888611 0 0 8.13889668877033 0 0 0 chimp,human,macaque,marmoset,orangutan, lincRNA processed_transcript A549@0.008397,AG04450@0.206965,BJ@0.0323625,GM12878@0.438217,H1HESC@0.475954,HELAS3@5.18228,HEPG2@2.12925,HMEC@0,HSMM@0,HUVEC@0.106369,K562@20.5757,MCF7@0,NHEK@0.00676733,NHLF@0,SKNSHRA@0.243814, 0 0 0 0 ENSG00000189229.10 ENST00000414603.1 chr3:6532490-6599646 2 515 66639 intergenic -6.47 0 0,0,0 0 0,0,0 0 2.44389921817554 0 0 4.60823241645283 0 0 6.03107789732739 0 0 0 chimp,dog,horse,human,macaque,marmoset,orangutan,panda, lincRNA processed_transcript A549@0.008397,AG04450@0.206965,BJ@0.0323625,GM12878@0.438217,H1HESC@0.475954,HELAS3@5.18228,HEPG2@2.12925,HMEC@0,HSMM@0,HUVEC@0.106369,K562@20.5757,MCF7@0,NHEK@0.00676733,NHLF@0,SKNSHRA@0.243814, 0 0 0 0 ENSG00000189229.10 ENST00000342990.3 chr3:6549468-6736485 2 244 186771 intergenic 0 0 0,1,0 1 0,0,0 0 3.92156169855063 0 0 5.72313153540967 0 0 8.09904642583699 0 0 0 chimp,human,macaque,orangutan, lincRNA processed_transcript A549@0.008397,AG04450@0.206965,BJ@0.0323625,GM12878@0.438217,H1HESC@0.475954,HELAS3@5.18228,HEPG2@2.12925,HMEC@0,HSMM@0,HUVEC@0.106369,K562@20.5757,MCF7@0,NHEK@0.00676733,NHLF@0,SKNSHRA@0.243814, 1 96 0 0 ENSG00000226258.2 ENST00000455623.1 chr3:6673376-6686581 2 945 12258 intergenic -8.16 0 0,0,0 0 0,0,0 52.152380952381 5.73241964431392 0 91.5259259259259 7.37216511665851 0 73.6560846560847 8.92861804535814 0 0 0 chimp,cow,dog,elephant,guinea_pig,horse,human,macaque,marmoset,mouse,orangutan,panda,pig,rabbit, processed_transcript processed_transcript A549@0,AG04450@0,BJ@0,GM12878@0.018428,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000226258.2 ENST00000445675.1 chr3:6673587-6706593 4 916 32084 intergenic -6.03 0 0,0,0 0 0,0,0 86.3886462882096 3.68775713751403 0 94.4235807860262 4.92158085026805 0 78.1124454148472 5.78752649295599 0 0 0 cat,chimp,cow,dog,elephant,guinea_pig,horse,human,macaque,marmoset,mouse,opossum,orangutan,panda,pig,rabbit,rat, processed_transcript processed_transcript A549@0,AG04450@0,BJ@0,GM12878@0.018428,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000226258.2 ENST00000412629.1 chr3:6674045-6847136 4 479 172606 intronic -6.03 1 0,0,0 0 0,0,0 165.202505219207 5.69727587685248 0 180.567849686848 8.42027507734378 1.61 149.375782881002 11.3931960650267 1.701 0 0 cat,chimp,cow,dog,elephant,guinea_pig,horse,human,macaque,marmoset,mouse,orangutan,panda,pig,rat, processed_transcript processed_transcript A549@0,AG04450@0,BJ@0,GM12878@0.018428,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000226258.2 ENST00000458713.1 chr3:6674223-6706630 5 449 31950 intergenic -0.88 0 0,0,0 0 0,0,0 66.4766146993318 3.70322378716745 0 41.4610244988864 4.94222222222222 0 31.1380846325167 5.81179968701095 0 0 0 cat,chimp,cow,dog,elephant,horse,human,macaque,marmoset,orangutan,panda,pig, processed_transcript processed_transcript A549@0,AG04450@0,BJ@0,GM12878@0.018428,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000189229.10 ENST00000432743.1 chr3:6736410-6739557 2 628 2517 intergenic -9.13 0 0,0,0 0 0,0,0 0 0 0 0 0 0 0 2.81168057210965 0 0 0 cat,chimp,guinea_pig,human,macaque,marmoset,orangutan,panda,pig, lincRNA processed_transcript A549@0.008397,AG04450@0.206965,BJ@0.0323625,GM12878@0.438217,H1HESC@0.475954,HELAS3@5.18228,HEPG2@2.12925,HMEC@0,HSMM@0,HUVEC@0.106369,K562@20.5757,MCF7@0,NHEK@0.00676733,NHLF@0,SKNSHRA@0.243814, 0 0 0 0 ENSG00000226258.2 ENST00000449158.2 chr3:6763002-6832792 2 442 69346 intronic 1.90 0 0,0,0 0 0,0,0 0 9.04717062759575 23.976 0 11.6742472311952 34.58 0 12.8528351407476 32.488 0 0 chimp,human,macaque,marmoset,orangutan, processed_transcript processed_transcript A549@0,AG04450@0,BJ@0,GM12878@0.018428,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000226258.2 ENST00000417482.1 chr3:6772859-6847125 4 450 73810 intronic -8.30 0 0,0,0 0 0,0,0 0 9.66241701666441 0 0 13.8907329630131 1.61 0 14.5961251862891 1.701 0 0 chimp,guinea_pig,horse,human,macaque,marmoset,orangutan,panda,rabbit, processed_transcript processed_transcript A549@0,AG04450@0,BJ@0,GM12878@0.018428,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000226258.2 ENST00000424366.1 chr3:6781225-6847114 5 481 65400 intronic -5.11 0 0,0,0 0 0,0,0 0 10.9049388379205 0 0 15.6029051987768 1.61 0 16.3288226299694 1.701 0 0 cat,chimp,cow,dog,elephant,guinea_pig,horse,human,macaque,marmoset,orangutan,panda,pig, processed_transcript processed_transcript A549@0,AG04450@0,BJ@0,GM12878@0.018428,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000226258.2 ENST00000452244.1 chr3:6782054-6784374 2 407 1911 intergenic -5.11 1 0,0,0 0 0,0,0 0 0 0 0 0.875457875457875 0 0 0.919413919413919 0 0 0 chimp,human,macaque,marmoset,orangutan,panda, processed_transcript processed_transcript A549@0,AG04450@0,BJ@0,GM12878@0.018428,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000226258.2 ENST00000454410.2 chr3:6830621-6847096 3 332 16139 intronic -4.44 0 0,0,1 0 0,0,0 0 17.7044679928116 0 9.83233532934132 26.6302906364256 1.61 8.26646706586826 29.3083596703229 1.701 0 0 chimp,cow,dog,elephant,human,macaque,marmoset,orangutan,panda,pig, processed_transcript processed_transcript A549@0,AG04450@0,BJ@0,GM12878@0.018428,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000237665.1 ENST00000427748.1 chr3:6934319-6935709 2 518 870 intronic -7.39 0 0,0,0 0 0,0,0 0 0 0 0 0 10.206 0 0 14.058 0 0 chimp,horse,human,macaque,marmoset,orangutan,panda,pig, antisense antisense A549@0,AG04450@0.005693,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0.010345, 0 0 0 0 ENSG00000236202.1 ENST00000420230.1 chr3:7561428-7576971 3 427 15112 intronic 4.70 0 0,1,1 0 0,0,0 0 2.07391476971943 0 0 3.73332451032292 0 0 4.49430915828481 0 0 0 chimp,dog,horse,human,macaque,marmoset,orangutan, antisense antisense A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0.010571, 0 0 0 0 ENSG00000236202.1 ENST00000427273.1 chr3:7561825-7602020 2 192 40001 intronic -3.38 0 0,1,0 0 0,0,0 0 4.30746731331717 0 0 7.17164570885728 0 0 8.40621484462889 0 0 0 cat,chimp,dog,horse,human,macaque,marmoset,orangutan,panda, antisense antisense A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0.010571, 0 0 0 0 ENSG00000227110.2 ENST00000441861.1 chr3:7994492-8057994 4 2679 60817 intergenic 1.54 0 0,0,0 0 0,0,0 0 6.69582518045941 0 8.22247107129526 10.5580840883306 0 40.8480776409108 12.3439334396633 0 0 0 chimp,human,macaque,marmoset,orangutan, lincRNA processed_transcript A549@0.802719,AG04450@0.147972,BJ@0.117165,GM12878@0.060082,H1HESC@0.592437,HELAS3@0.0601865,HEPG2@0.125095,HMEC@0.016915,HSMM@0.055487,HUVEC@0.171079,K562@0.0085595,MCF7@0.400807,NHEK@0.231232,NHLF@0.0556335,SKNSHRA@0.617363, 0 0 0 0 ENSG00000227110.2 ENST00000446281.1 chr3:7996326-8543284 6 926 546022 intergenic -2.16 0 0,1,0 0 0,0,0 40.3963282937365 5.24935442161671 33.81 52.9233261339093 8.76176967228428 40.516 201.11555075594 10.896568270143 49.531 0 0 cat,chimp,cow,dog,elephant,horse,human,marmoset,mouse,orangutan,pig,rat, lincRNA processed_transcript A549@0.802719,AG04450@0.147972,BJ@0.117165,GM12878@0.060082,H1HESC@0.592437,HELAS3@0.0601865,HEPG2@0.125095,HMEC@0.016915,HSMM@0.055487,HUVEC@0.171079,K562@0.0085595,MCF7@0.400807,NHEK@0.231232,NHLF@0.0556335,SKNSHRA@0.617363, 0 0 0 0 ENSG00000228351.1 ENST00000428171.1 chr3:8121009-8154611 6 560 33032 intergenic -0.20 0 0,0,0 0 0,0,0 0 3.46355049648825 0 0 7.54220150157423 0 0 8.7074049406636 0 0 0 chimp,human,macaque,marmoset,orangutan, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000227110.2 ENST00000452802.1 chr3:8235936-8543332 4 1383 306007 intergenic -6.92 1 0,1,0 0 0,0,0 27.0477223427332 6.6058031352224 33.81 21.3239334779465 9.40447440744819 41.77 71.9754157628344 12.1868029162732 49.774 0 0 cat,chimp,cow,dog,elephant,guinea_pig,horse,human,marmoset,orangutan,pig, lincRNA processed_transcript A549@0.802719,AG04450@0.147972,BJ@0.117165,GM12878@0.060082,H1HESC@0.592437,HELAS3@0.0601865,HEPG2@0.125095,HMEC@0.016915,HSMM@0.055487,HUVEC@0.171079,K562@0.0085595,MCF7@0.400807,NHEK@0.231232,NHLF@0.0556335,SKNSHRA@0.617363, 0 0 0 0 ENSG00000227110.2 ENST00000420095.1 chr3:8262834-8543341 4 2140 278361 intergenic 4.14 1 0,1,0 0 0,0,0 17.4799065420561 7.11921210227007 33.81 14.0742990654206 9.53746394071008 41.456 48.6023364485981 12.5072872995858 49.064 0 0 chimp,human,macaque,orangutan, lincRNA processed_transcript A549@0.802719,AG04450@0.147972,BJ@0.117165,GM12878@0.060082,H1HESC@0.592437,HELAS3@0.0601865,HEPG2@0.125095,HMEC@0.016915,HSMM@0.055487,HUVEC@0.171079,K562@0.0085595,MCF7@0.400807,NHEK@0.231232,NHLF@0.0556335,SKNSHRA@0.617363, 0 0 0 0 ENSG00000231401.1 ENST00000435368.1 chr3:8406393-8408078 3 935 746 intergenic -2.09 0 0,0,0 0 0,0,0 12.8342245989305 67.9490616621984 36.162 20.1069518716578 74.902144772118 57.148 23.0919786096257 91.4879356568365 83.874 0 0 cat,chimp,human,macaque,marmoset,orangutan, lincRNA lincRNA A549@0.22755,AG04450@0.017678,BJ@0.007504,GM12878@0.005751,H1HESC@0.201332,HELAS3@0.0059525,HEPG2@0.011262,HMEC@0,HSMM@0,HUVEC@0.010375,K562@0,MCF7@0.007263,NHEK@0.005329,NHLF@0,SKNSHRA@0.0462205, 0 0 0 0 ENSG00000227110.2 ENST00000455811.2 chr3:8540171-8543315 2 522 2620 intergenic 0 0 0,1,1 0 0,0,0 71.6609195402299 41.8030534351145 33.81 51.683908045977 15.4751908396947 42.301 172.942528735632 17.780534351145 50.188 0 0 cat,chimp,guinea_pig,horse,human,macaque,marmoset,orangutan,panda, lincRNA processed_transcript A549@0.802719,AG04450@0.147972,BJ@0.117165,GM12878@0.060082,H1HESC@0.592437,HELAS3@0.0601865,HEPG2@0.125095,HMEC@0.016915,HSMM@0.055487,HUVEC@0.171079,K562@0.0085595,MCF7@0.400807,NHEK@0.231232,NHLF@0.0556335,SKNSHRA@0.617363, 0 0 0 0 ENSG00000227110.2 ENST00000439407.1 chr3:8540295-8653610 4 572 112737 encompassing 2.97 0 0,0,0 0 0,0,0 0 15.2072345370198 0 11.2727272727273 11.2289044413103 0 10.1818181818182 12.8705305268013 0 0 0 chimp,cow,horse,human,macaque,marmoset,orangutan,panda, lincRNA processed_transcript A549@0.802719,AG04450@0.147972,BJ@0.117165,GM12878@0.060082,H1HESC@0.592437,HELAS3@0.0601865,HEPG2@0.125095,HMEC@0.016915,HSMM@0.055487,HUVEC@0.171079,K562@0.0085595,MCF7@0.400807,NHEK@0.231232,NHLF@0.0556335,SKNSHRA@0.617363, 0 0 0 0 ENSG00000237697.1 ENST00000442796.1 chr3:8614371-8615561 1 1190 0 intergenic -4.89 1 0,0,1 0 0,0,0 0 0 0 1.40588235294118 0 0 1.42941176470588 0 0 0 0 chimp,guinea_pig,human,macaque,marmoset,orangutan, lincRNA lincRNA A549@2.1846,AG04450@0.95241,BJ@1.67985,GM12878@0.0844315,H1HESC@0.318584,HELAS3@0,HEPG2@0.124785,HMEC@0,HSMM@1.48989,HUVEC@0.222492,K562@0,MCF7@0.0579725,NHEK@0.102599,NHLF@0.826022,SKNSHRA@0.809449, 0 0 0 0 ENSG00000224884.1 ENST00000437047.1 chr3:8615412-8634810 2 559 18837 intergenic -1.66 0 0,0,0 0 0,0,0 0 4.61565005043266 0 1.77459749552773 4.90964590964591 9.3 1.85330948121646 5.37840420449116 9.483 0 0 chimp,human,macaque,marmoset,orangutan, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0.006121,HELAS3@0.0040275,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 2 44 0 0 ENSG00000227110.2 ENST00000458666.1 chr3:8651124-8653586 4 577 1879 intergenic -2.82 0 0,0,0 0 0,0,0 0 0 0 0 0 0 0 0 0 0 0 chimp,human,macaque,orangutan, lincRNA processed_transcript A549@0.802719,AG04450@0.147972,BJ@0.117165,GM12878@0.060082,H1HESC@0.592437,HELAS3@0.0601865,HEPG2@0.125095,HMEC@0.016915,HSMM@0.055487,HUVEC@0.171079,K562@0.0085595,MCF7@0.400807,NHEK@0.231232,NHLF@0.0556335,SKNSHRA@0.617363, 0 0 0 0 ENSG00000224808.1 ENST00000414633.1 chr3:9055807-9057663 2 426 1428 exonic -1.49 1 0,0,0 0 0,0,0 27.5704225352113 39.9054621848739 208.048 11.8708920187793 55.1330532212885 251.572 21.3615023474178 64.2156862745098 226.619 0 0 chimp,human,macaque,marmoset,orangutan, antisense antisense A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000228723.1 ENST00000436032.1 chr3:9234177-9236045 3 1198 666 intronic 4.12 1 0,0,0 0 0,0,0 0 0 0 5.64607679465776 6.94894894894895 0 5.96327212020033 5.08108108108108 0 0 0 chimp,cow,dog,elephant,horse,human,macaque,marmoset,orangutan,panda, antisense antisense A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000228723.1 ENST00000450920.1 chr3:9234219-9236137 2 1187 729 intronic 3.23 1 0,0,0 0 0,0,0 0 0 0 0 16.1152263374486 0 0 14.957475994513 0 0 0 chimp,cow,dog,elephant,human,macaque,marmoset,orangutan,panda, antisense antisense A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000227929.2 ENST00000432981.1 chr3:9258579-9259771 3 564 624 intronic -0.69 0 0,0,0 0 0,0,0 64.7216312056738 0 0 16.0620567375887 0 0 16.8067375886525 0 0 0 0 chimp,cow,elephant,human,macaque,marmoset,orangutan, antisense antisense A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000227929.2 ENST00000546112.1 chr3:9258579-9261192 6 1213 1390 intronic -0.69 0 0,0,1 0 0,0,0 46.9150865622424 0 0 7.46826051112943 0 0 7.81450948062655 0 0 0 0 chimp,cow,dog,elephant,horse,human,macaque,marmoset,orangutan,panda,pig, antisense antisense A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000235830.1 ENST00000449023.1 chr3:9298443-9299191 2 375 371 intergenic 0 0 0,0,0 0 0,0,0 0 0 0 0 0 0 0 0 0 0 0 cat,chimp,human,marmoset,orangutan,panda, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0.0055025,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0.0120465, 0 0 0 0 ENSG00000254485.1 ENST00000491930.2 chr3:9334272-9404713 4 825 69610 exonic -1.57 1 1,1,1 1 0,0,0 47.6363636363636 7.81175118517454 0 75.4448484848485 7.57794857060767 9.954 76.9854545454545 19.0483263898865 11.529 0 1 chimp,human,macaque,orangutan, processed_transcript processed_transcript A549@0.702665,AG04450@0.795044,BJ@0.485812,GM12878@0.526064,H1HESC@0.634874,HELAS3@1.1273,HEPG2@0.648751,HMEC@0.09005,HSMM@0.091863,HUVEC@0.200306,K562@0.828852,MCF7@0.807883,NHEK@0.244889,NHLF@0.142369,SKNSHRA@0.514634, 0 0 0 0 ENSG00000254485.1 ENST00000518331.1 chr3:9379286-9404987 2 538 25161 exonic 0 0 0,1,0 0 0,0,0 0 2.88259608123683 0 18.5018587360595 4.91276181391837 0 21.4293680297398 33.9335876952426 0 0 0 chimp,cow,dog,elephant,guinea_pig,human,macaque,marmoset,orangutan, processed_transcript processed_transcript A549@0.702665,AG04450@0.795044,BJ@0.485812,GM12878@0.526064,H1HESC@0.634874,HELAS3@1.1273,HEPG2@0.648751,HMEC@0.09005,HSMM@0.091863,HUVEC@0.200306,K562@0.828852,MCF7@0.807883,NHEK@0.244889,NHLF@0.142369,SKNSHRA@0.514634, 0 0 0 0 ENSG00000254485.1 ENST00000466431.2 chr3:9391369-9404625 2 482 12772 exonic -3.91 0 1,1,1 1 0,0,0 0 0 0 0 2.96930786094582 9.954 77.8941908713693 2.41708424678985 11.529 0 0 cat,chimp,cow,dog,elephant,guinea_pig,horse,human,macaque,marmoset,mouse,orangutan,panda,pig,rabbit,rat, processed_transcript processed_transcript A549@0.702665,AG04450@0.795044,BJ@0.485812,GM12878@0.526064,H1HESC@0.634874,HELAS3@1.1273,HEPG2@0.648751,HMEC@0.09005,HSMM@0.091863,HUVEC@0.200306,K562@0.828852,MCF7@0.807883,NHEK@0.244889,NHLF@0.142369,SKNSHRA@0.514634, 0 0 0 0 ENSG00000254485.1 ENST00000517846.1 chr3:9391369-9404690 3 605 12712 exonic -3.91 0 1,1,1 1 0,0,0 0 0 0 0 2.98332284455632 9.954 62.0578512396694 2.42849276274386 11.529 0 0 chimp,cow,dog,guinea_pig,human,macaque,marmoset,mouse,orangutan,pig,rabbit, processed_transcript processed_transcript A549@0.702665,AG04450@0.795044,BJ@0.485812,GM12878@0.526064,H1HESC@0.634874,HELAS3@1.1273,HEPG2@0.648751,HMEC@0.09005,HSMM@0.091863,HUVEC@0.200306,K562@0.828852,MCF7@0.807883,NHEK@0.244889,NHLF@0.142369,SKNSHRA@0.514634, 0 0 0 0 ENSG00000206573.4 ENST00000468186.1 chr3:9391373-9438338 3 3250 43711 encompassing 0.92 1 0,1,1 1 0,1,0 3.55846153846154 11.8296309853355 113.807 19.9913846153846 17.8318958614536 286.507 32.444 18.1987829150557 263.625 0 1 chimp,human,orangutan, processed_transcript non_coding A549@7.35322,AG04450@6.43793,BJ@4.34063,GM12878@19.3471,H1HESC@6.10803,HELAS3@23.4105,HEPG2@12.8931,HMEC@3.23711,HSMM@3.52149,HUVEC@5.04955,K562@27.2979,MCF7@12.1285,NHEK@5.72479,NHLF@3.67101,SKNSHRA@4.25999, 0 0 0 0 ENSG00000254485.1 ENST00000517687.1 chr3:9397456-9404662 2 225 6979 exonic 0 0 1,1,1 1 0,0,0 0 0 0 0 0 9.954 0 0 11.529 1 1 chimp,human,macaque,marmoset,orangutan, processed_transcript processed_transcript A549@0.702665,AG04450@0.795044,BJ@0.485812,GM12878@0.526064,H1HESC@0.634874,HELAS3@1.1273,HEPG2@0.648751,HMEC@0.09005,HSMM@0.091863,HUVEC@0.200306,K562@0.828852,MCF7@0.807883,NHEK@0.244889,NHLF@0.142369,SKNSHRA@0.514634, 0 0 0 0 ENSG00000206573.4 ENST00000519043.1 chr3:9426948-9440263 5 1110 12197 exonic -1.83 1 0,1,1 1 0,0,0 0 19.8891530704272 158.62 13.0783783783784 54.0848569320325 220.874 14.5657657657658 50.0927277199311 221.715 0 0 chimp,dog,horse,human,macaque,marmoset,orangutan, processed_transcript non_coding A549@7.35322,AG04450@6.43793,BJ@4.34063,GM12878@19.3471,H1HESC@6.10803,HELAS3@23.4105,HEPG2@12.8931,HMEC@3.23711,HSMM@3.52149,HUVEC@5.04955,K562@27.2979,MCF7@12.1285,NHEK@5.72479,NHLF@3.67101,SKNSHRA@4.25999, 0 0 0 0 ENSG00000206573.4 ENST00000521609.1 chr3:9427479-9439112 5 788 10837 exonic -1.83 1 1,1,1 1 0,0,0 0 6.99612438866845 166.771 4.83883248730965 19.7190181784627 442.768 2.62944162436548 18.8536495340039 403.556 1 1 chimp,human,macaque,marmoset,orangutan, processed_transcript non_coding A549@7.35322,AG04450@6.43793,BJ@4.34063,GM12878@19.3471,H1HESC@6.10803,HELAS3@23.4105,HEPG2@12.8931,HMEC@3.23711,HSMM@3.52149,HUVEC@5.04955,K562@27.2979,MCF7@12.1285,NHEK@5.72479,NHLF@3.67101,SKNSHRA@4.25999, 0 0 0 0 ENSG00000206573.4 ENST00000520629.1 chr3:9427506-9438307 4 411 10384 exonic -1.83 1 1,1,1 1 0,1,0 0 1.11373266563945 108.507 4.0705596107056 6.20406394453005 266.634 3.22384428223844 6.360843605547 245.433 0 0 chimp,horse,human,macaque,marmoset,orangutan,panda, processed_transcript non_coding A549@7.35322,AG04450@6.43793,BJ@4.34063,GM12878@19.3471,H1HESC@6.10803,HELAS3@23.4105,HEPG2@12.8931,HMEC@3.23711,HSMM@3.52149,HUVEC@5.04955,K562@27.2979,MCF7@12.1285,NHEK@5.72479,NHLF@3.67101,SKNSHRA@4.25999, 0 0 0 0 ENSG00000206573.4 ENST00000523354.1 chr3:9427520-9432303 3 456 4323 exonic -1.83 1 0,0,1 0 0,0,0 0 0 0 3.66885964912281 0 0 0 0 0 0 0 cat,chimp,human,macaque,marmoset,orangutan,panda,rabbit, processed_transcript non_coding A549@7.35322,AG04450@6.43793,BJ@4.34063,GM12878@19.3471,H1HESC@6.10803,HELAS3@23.4105,HEPG2@12.8931,HMEC@3.23711,HSMM@3.52149,HUVEC@5.04955,K562@27.2979,MCF7@12.1285,NHEK@5.72479,NHLF@3.67101,SKNSHRA@4.25999, 0 0 0 0 ENSG00000206573.4 ENST00000522525.1 chr3:9430533-9439177 3 1864 6776 intergenic -1.83 0 1,1,1 1 0,0,0 5.11802575107296 11.1890495867769 156.966 19.8041845493562 31.5370425029516 407.993 19.1748927038627 30.1530401416765 369.886 1 1 chimp,human,macaque,marmoset,orangutan, processed_transcript non_coding A549@7.35322,AG04450@6.43793,BJ@4.34063,GM12878@19.3471,H1HESC@6.10803,HELAS3@23.4105,HEPG2@12.8931,HMEC@3.23711,HSMM@3.52149,HUVEC@5.04955,K562@27.2979,MCF7@12.1285,NHEK@5.72479,NHLF@3.67101,SKNSHRA@4.25999, 0 0 0 0 ENSG00000206573.4 ENST00000520447.1 chr3:9430567-9439179 3 1806 6802 intergenic -1.83 1 1,1,1 1 0,0,0 5.57585825027685 11.1462805057336 156.436 21.0326688815061 31.4164951484857 406.923 20.3643410852713 30.0377830049985 368.85 0 1 chimp,human,macaque,orangutan, processed_transcript non_coding A549@7.35322,AG04450@6.43793,BJ@4.34063,GM12878@19.3471,H1HESC@6.10803,HELAS3@23.4105,HEPG2@12.8931,HMEC@3.23711,HSMM@3.52149,HUVEC@5.04955,K562@27.2979,MCF7@12.1285,NHEK@5.72479,NHLF@3.67101,SKNSHRA@4.25999, 0 0 0 0 ENSG00000206573.4 ENST00000521267.1 chr3:9431044-9438289 4 847 6392 intergenic -1.83 0 1,1,1 1 0,1,0 0 1.8092928660826 103.737 0 10.0786921151439 253.332 0 10.3333854818523 234.446 1 1 chimp,human,macaque,marmoset,orangutan, processed_transcript non_coding A549@7.35322,AG04450@6.43793,BJ@4.34063,GM12878@19.3471,H1HESC@6.10803,HELAS3@23.4105,HEPG2@12.8931,HMEC@3.23711,HSMM@3.52149,HUVEC@5.04955,K562@27.2979,MCF7@12.1285,NHEK@5.72479,NHLF@3.67101,SKNSHRA@4.25999, 0 0 0 0 ENSG00000206573.4 ENST00000467069.2 chr3:9431176-9439113 4 663 7268 intergenic -1.83 0 0,1,0 1 0,0,0 0 10.4316180517336 166.771 4.03469079939668 29.4021739130435 442.233 3.90648567119155 28.1118602091359 403.038 1 1 chimp,human,macaque,marmoset,orangutan, processed_transcript non_coding A549@7.35322,AG04450@6.43793,BJ@4.34063,GM12878@19.3471,H1HESC@6.10803,HELAS3@23.4105,HEPG2@12.8931,HMEC@3.23711,HSMM@3.52149,HUVEC@5.04955,K562@27.2979,MCF7@12.1285,NHEK@5.72479,NHLF@3.67101,SKNSHRA@4.25999, 0 0 0 0 ENSG00000206573.4 ENST00000520396.1 chr3:9431195-9438289 3 547 6543 intergenic -1.83 0 0,1,0 1 0,1,0 0 1.76753782668501 103.737 0 9.84609506342656 253.332 0 10.0949105914718 234.446 1 1 chimp,human,macaque,marmoset,orangutan, processed_transcript non_coding A549@7.35322,AG04450@6.43793,BJ@4.34063,GM12878@19.3471,H1HESC@6.10803,HELAS3@23.4105,HEPG2@12.8931,HMEC@3.23711,HSMM@3.52149,HUVEC@5.04955,K562@27.2979,MCF7@12.1285,NHEK@5.72479,NHLF@3.67101,SKNSHRA@4.25999, 0 0 0 0 ENSG00000206573.4 ENST00000494680.2 chr3:9431383-9439123 5 539 7193 intergenic -1.83 0 0,1,1 1 0,0,0 0 10.5403864868622 166.771 14.8886827458256 29.708744612818 436.883 14.4155844155844 28.4049770610316 397.858 0 0 chimp,horse,human,macaque,marmoset,orangutan, processed_transcript non_coding A549@7.35322,AG04450@6.43793,BJ@4.34063,GM12878@19.3471,H1HESC@6.10803,HELAS3@23.4105,HEPG2@12.8931,HMEC@3.23711,HSMM@3.52149,HUVEC@5.04955,K562@27.2979,MCF7@12.1285,NHEK@5.72479,NHLF@3.67101,SKNSHRA@4.25999, 0 0 0 0 ENSG00000206573.4 ENST00000522221.1 chr3:9431599-9433506 2 977 928 intergenic -1.83 0 0,1,1 0 0,0,0 0 0 0 0 0 0 0 0 0 1 1 chimp,human,macaque,marmoset,orangutan, processed_transcript non_coding A549@7.35322,AG04450@6.43793,BJ@4.34063,GM12878@19.3471,H1HESC@6.10803,HELAS3@23.4105,HEPG2@12.8931,HMEC@3.23711,HSMM@3.52149,HUVEC@5.04955,K562@27.2979,MCF7@12.1285,NHEK@5.72479,NHLF@3.67101,SKNSHRA@4.25999, 0 0 0 0 ENSG00000206573.4 ENST00000481221.2 chr3:9431772-9439158 4 679 6701 intergenic -1.83 0 1,1,1 1 0,0,0 6.63475699558174 11.3142814505298 162.001 39.3961708394698 31.8900164154604 418.158 38.1443298969072 30.4905238024176 379.728 0 0 chimp,cow,horse,human,macaque,marmoset,orangutan, processed_transcript non_coding A549@7.35322,AG04450@6.43793,BJ@4.34063,GM12878@19.3471,H1HESC@6.10803,HELAS3@23.4105,HEPG2@12.8931,HMEC@3.23711,HSMM@3.52149,HUVEC@5.04955,K562@27.2979,MCF7@12.1285,NHEK@5.72479,NHLF@3.67101,SKNSHRA@4.25999, 0 0 0 0 ENSG00000206573.4 ENST00000489616.1 chr3:9431822-9438318 3 580 5912 intergenic -1.83 0 1,1,1 1 0,1,0 0 1.95619079837618 111.422 0 10.8969891745602 274.763 2.28448275862069 11.1723612990528 252.957 0 0 chimp,horse,human,macaque,marmoset,orangutan,panda, processed_transcript non_coding A549@7.35322,AG04450@6.43793,BJ@4.34063,GM12878@19.3471,H1HESC@6.10803,HELAS3@23.4105,HEPG2@12.8931,HMEC@3.23711,HSMM@3.52149,HUVEC@5.04955,K562@27.2979,MCF7@12.1285,NHEK@5.72479,NHLF@3.67101,SKNSHRA@4.25999, 0 0 0 0 ENSG00000206573.4 ENST00000469846.2 chr3:9432996-9439188 3 667 5521 intergenic -4.41 0 1,1,1 1 0,0,0 18.6731634182909 13.7324760007245 154.051 64.167916041979 38.7058503894222 402.108 62.1289355322339 37.0072450642999 364.188 0 0 chimp,human,macaque,marmoset,orangutan,rat, processed_transcript non_coding A549@7.35322,AG04450@6.43793,BJ@4.34063,GM12878@19.3471,H1HESC@6.10803,HELAS3@23.4105,HEPG2@12.8931,HMEC@3.23711,HSMM@3.52149,HUVEC@5.04955,K562@27.2979,MCF7@12.1285,NHEK@5.72479,NHLF@3.67101,SKNSHRA@4.25999, 0 0 0 0 ENSG00000206573.4 ENST00000521708.1 chr3:9433031-9440051 2 547 6471 intronic -4.41 0 0,1,1 0 0,0,0 0 37.4884870962757 105.565 0 100.85890897852 170.863 11.2084095063985 92.4045742543656 178.815 0 1 chimp,human,orangutan, processed_transcript non_coding A549@7.35322,AG04450@6.43793,BJ@4.34063,GM12878@19.3471,H1HESC@6.10803,HELAS3@23.4105,HEPG2@12.8931,HMEC@3.23711,HSMM@3.52149,HUVEC@5.04955,K562@27.2979,MCF7@12.1285,NHEK@5.72479,NHLF@3.67101,SKNSHRA@4.25999, 0 0 0 0 ENSG00000206573.4 ENST00000480904.2 chr3:9433049-9438716 2 491 5174 intergenic -4.41 0 0,1,0 0 0,0,0 0 5.28430614611519 187.941 11.4602851323829 24.5715114031697 474.971 13.2158859470468 24.9586393505992 419.947 0 0 NA processed_transcript non_coding A549@7.35322,AG04450@6.43793,BJ@4.34063,GM12878@19.3471,H1HESC@6.10803,HELAS3@23.4105,HEPG2@12.8931,HMEC@3.23711,HSMM@3.52149,HUVEC@5.04955,K562@27.2979,MCF7@12.1285,NHEK@5.72479,NHLF@3.67101,SKNSHRA@4.25999, 0 0 0 0 ENSG00000206573.4 ENST00000498199.1 chr3:9433065-9438308 2 509 4732 intergenic -4.41 0 0,1,0 1 0,1,0 0 2.44399830938292 108.772 0 13.6143279797126 267.373 2.60314341846758 13.9583685545224 246.117 0 1 human,orangutan, processed_transcript non_coding A549@7.35322,AG04450@6.43793,BJ@4.34063,GM12878@19.3471,H1HESC@6.10803,HELAS3@23.4105,HEPG2@12.8931,HMEC@3.23711,HSMM@3.52149,HUVEC@5.04955,K562@27.2979,MCF7@12.1285,NHEK@5.72479,NHLF@3.67101,SKNSHRA@4.25999, 0 0 0 0 ENSG00000206573.4 ENST00000518437.1 chr3:9433344-9439180 2 238 5596 intergenic -5.84 0 1,1,1 1 0,0,0 43.4243697478992 13.5484274481773 156.171 161.848739495798 38.1870979270908 406.388 156.705882352941 36.5112580414582 368.332 0 1 human,macaque, processed_transcript non_coding A549@7.35322,AG04450@6.43793,BJ@4.34063,GM12878@19.3471,H1HESC@6.10803,HELAS3@23.4105,HEPG2@12.8931,HMEC@3.23711,HSMM@3.52149,HUVEC@5.04955,K562@27.2979,MCF7@12.1285,NHEK@5.72479,NHLF@3.67101,SKNSHRA@4.25999, 0 0 0 0 ENSG00000206573.4 ENST00000524210.1 chr3:9433404-9438342 2 2589 2347 intergenic 0.92 0 0,1,0 1 0,1,0 4.46697566628042 0 113.807 25.8771726535342 0.844056242011078 287.439 27.0011587485516 0.847038772901576 264.353 0 1 chimp,human,orangutan, processed_transcript non_coding A549@7.35322,AG04450@6.43793,BJ@4.34063,GM12878@19.3471,H1HESC@6.10803,HELAS3@23.4105,HEPG2@12.8931,HMEC@3.23711,HSMM@3.52149,HUVEC@5.04955,K562@27.2979,MCF7@12.1285,NHEK@5.72479,NHLF@3.67101,SKNSHRA@4.25999, 0 0 0 0 ENSG00000206573.4 ENST00000383834.2 chr3:9435634-9438752 1 3118 0 intergenic 7.25 0 0,1,0 0 0,1,0 8.76876202694035 0 199.929 43.8771648492623 0 484.57 45.0400898011546 0 428.249 0 1 chimp,human,orangutan, processed_transcript non_coding A549@7.35322,AG04450@6.43793,BJ@4.34063,GM12878@19.3471,H1HESC@6.10803,HELAS3@23.4105,HEPG2@12.8931,HMEC@3.23711,HSMM@3.52149,HUVEC@5.04955,K562@27.2979,MCF7@12.1285,NHEK@5.72479,NHLF@3.67101,SKNSHRA@4.25999, 0 0 0 0 ENSG00000230082.1 ENST00000431558.1 chr3:9989088-9996471 4 610 6767 exonic 2.26 1 1,1,1 1 0,0,0 131.960655737705 50.629968967046 377.594 76.227868852459 54.1678735037683 408.381 94.5737704918033 98.5418944879562 365.2 0 0 chimp,human,macaque,marmoset, antisense antisense A549@3.42238,AG04450@0.369058,BJ@0.778682,GM12878@0.145476,H1HESC@0.396528,HELAS3@2.77165,HEPG2@2.88238,HMEC@0.92029,HSMM@0.648573,HUVEC@0.728465,K562@0.376214,MCF7@0.150072,NHEK@0.586546,NHLF@0.773523,SKNSHRA@0.298021, 0 0 0 0 ENSG00000206567.4 ENST00000383808.2 chr3:10048102-10052779 4 1893 2778 intergenic 5.03 0 1,1,1 1 0,0,1 0 0 0 0 0 0 0 0 0 0 0 chimp,human,macaque,marmoset,orangutan, processed_transcript processed_transcript A549@0.949828,AG04450@1.31378,BJ@0.662284,GM12878@0.272734,H1HESC@0.513856,HELAS3@0.929768,HEPG2@1.62021,HMEC@0.601591,HSMM@0.580675,HUVEC@1.50958,K562@0.506306,MCF7@1.52202,NHEK@0.457417,NHLF@1.08298,SKNSHRA@2.24954, 0 0 0 0 ENSG00000206567.4 ENST00000420091.1 chr3:10048129-10050815 3 1563 1119 intergenic 5.03 0 1,1,1 0 0,0,1 0 0 0 0 0 0 0 0 0 0 0 chimp,human,macaque,marmoset,orangutan, processed_transcript processed_transcript A549@0.949828,AG04450@1.31378,BJ@0.662284,GM12878@0.272734,H1HESC@0.513856,HELAS3@0.929768,HEPG2@1.62021,HMEC@0.601591,HSMM@0.580675,HUVEC@1.50958,K562@0.506306,MCF7@1.52202,NHEK@0.457417,NHLF@1.08298,SKNSHRA@2.24954, 0 0 0 0 ENSG00000206567.4 ENST00000437616.1 chr3:10049110-10052860 3 564 3182 intergenic 3.62 0 0,1,0 1 0,0,1 0 0 0 0 0 0 0 0 0 0 0 chimp,human,macaque,marmoset,orangutan, processed_transcript processed_transcript A549@0.949828,AG04450@1.31378,BJ@0.662284,GM12878@0.272734,H1HESC@0.513856,HELAS3@0.929768,HEPG2@1.62021,HMEC@0.601591,HSMM@0.580675,HUVEC@1.50958,K562@0.506306,MCF7@1.52202,NHEK@0.457417,NHLF@1.08298,SKNSHRA@2.24954, 0 0 0 0 ENSG00000206567.4 ENST00000454232.1 chr3:10049146-10052893 3 595 3148 intergenic 3.62 0 0,1,0 1 0,0,1 0 0 0 0 0 0 0 0 0 0 0 chimp,human,macaque,marmoset,orangutan, processed_transcript processed_transcript A549@0.949828,AG04450@1.31378,BJ@0.662284,GM12878@0.272734,H1HESC@0.513856,HELAS3@0.929768,HEPG2@1.62021,HMEC@0.601591,HSMM@0.580675,HUVEC@1.50958,K562@0.506306,MCF7@1.52202,NHEK@0.457417,NHLF@1.08298,SKNSHRA@2.24954, 0 0 0 0 ENSG00000206567.4 ENST00000426698.1 chr3:10049987-10052798 2 577 2232 intergenic 3.43 0 0,1,0 1 0,0,1 0 0 0 0 0 0 0 0 0 0 0 chimp,human,macaque,marmoset,orangutan, processed_transcript processed_transcript A549@0.949828,AG04450@1.31378,BJ@0.662284,GM12878@0.272734,H1HESC@0.513856,HELAS3@0.929768,HEPG2@1.62021,HMEC@0.601591,HSMM@0.580675,HUVEC@1.50958,K562@0.506306,MCF7@1.52202,NHEK@0.457417,NHLF@1.08298,SKNSHRA@2.24954, 0 0 0 0 ENSG00000206567.4 ENST00000429065.1 chr3:10052086-10052861 2 154 619 intergenic 0 0 0,1,0 1 0,0,1 0 0 0 0 0 0 0 0 0 0 0 chimp,human,macaque,marmoset,orangutan, processed_transcript processed_transcript A549@0.949828,AG04450@1.31378,BJ@0.662284,GM12878@0.272734,H1HESC@0.513856,HELAS3@0.929768,HEPG2@1.62021,HMEC@0.601591,HSMM@0.580675,HUVEC@1.50958,K562@0.506306,MCF7@1.52202,NHEK@0.457417,NHLF@1.08298,SKNSHRA@2.24954, 0 0 0 0 ENSG00000231177.4 ENST00000538717.1 chr3:10326103-10327429 1 1326 0 exonic 3.47 1 0,0,1 0 0,0,0 0 0 0 2.80241327300151 0 5.1 3.06334841628959 0 5.168 0 0 chimp,dog,elephant,horse,human,macaque,orangutan,panda, antisense antisense A549@1.15406,AG04450@0.923937,BJ@0.991195,GM12878@2.71993,H1HESC@3.13685,HELAS3@2.07465,HEPG2@2.90583,HMEC@0.576562,HSMM@0.981528,HUVEC@4.41532,K562@1.74247,MCF7@3.52936,NHEK@1.97438,NHLF@2.07998,SKNSHRA@0.963635, 0 0 0 0 ENSG00000231177.4 ENST00000475197.1 chr3:10326103-10327430 1 1327 0 exonic 3.47 1 0,0,1 0 0,0,0 0 0 0 2.80030143180106 0 5.1 3.06103993971364 0 5.168 0 0 chimp,dog,elephant,horse,human,macaque,orangutan,panda, antisense antisense A549@1.15406,AG04450@0.923937,BJ@0.991195,GM12878@2.71993,H1HESC@3.13685,HELAS3@2.07465,HEPG2@2.90583,HMEC@0.576562,HSMM@0.981528,HUVEC@4.41532,K562@1.74247,MCF7@3.52936,NHEK@1.97438,NHLF@2.07998,SKNSHRA@0.963635, 0 0 0 0 ENSG00000240288.1 ENST00000439539.1 chr3:10327472-10334334 4 871 5985 exonic 3.74 0 0,1,0 0 0,1,0 0 9.9734335839599 0 0 17.0212197159566 5.204 0 18.0227234753551 5.694 0 0 chimp,elephant,horse,human,macaque,marmoset,orangutan,panda, processed_transcript processed_transcript A549@0.218841,AG04450@0.280271,BJ@0.267919,GM12878@0.603118,H1HESC@0.740576,HELAS3@0.323481,HEPG2@0.645218,HMEC@0.084053,HSMM@0.101208,HUVEC@0.249003,K562@0.521649,MCF7@0.51449,NHEK@0.208578,NHLF@0.058531,SKNSHRA@0.198543, 0 0 0 0 ENSG00000236999.1 ENST00000440152.1 chr3:10607939-10612059 2 470 3648 intronic -1.15 0 0,0,0 0 0,0,0 38.1382978723404 16.1052631578947 36.714 0 0.524122807017544 3.107 0 0.532894736842105 0 0 0 chimp,human,macaque,orangutan, sense_intronic sense_intronic A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000224771.1 ENST00000419591.1 chr3:10667706-10668492 2 505 279 intronic -3.52 0 0,0,0 0 0,0,0 0 0 0 0 0 0 0 0 0 0 0 chimp,human,macaque,marmoset,orangutan, sense_intronic sense_intronic A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000226567.1 ENST00000412578.1 chr3:10801169-10805877 3 2866 1838 intergenic 4.52 0 0,1,0 0 0,0,0 7.8049546406141 0 184.043 2.57327285415213 0.780195865070729 166.002 3.63328681088625 0.793253536452666 165.923 0 0 chimp,human,macaque,marmoset,orangutan,panda, lincRNA lincRNA A549@0,AG04450@0.0041275,BJ@0,GM12878@0,H1HESC@0.000723,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0.00276,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000226567.1 ENST00000436060.1 chr3:10803391-10805866 3 426 2045 intergenic 0 0 0,1,0 0 0,0,0 45.8732394366197 0 186.87 4.74882629107981 2.59070904645477 166.002 11.7723004694836 2.6161369193154 165.923 0 0 chimp,dog,horse,human,macaque,marmoset,orangutan,rabbit, lincRNA lincRNA A549@0,AG04450@0.0041275,BJ@0,GM12878@0,H1HESC@0.000723,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0.00276,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000230599.2 ENST00000440266.2 chr3:10809149-10813403 2 450 3802 intergenic 0.99 0 0,0,0 0 0,0,0 0 27.9765912677538 0 0 16.5752235665439 48.64 0 17.9045239347712 49.015 0 0 cat,chimp,elephant,human,macaque,marmoset,orangutan,panda, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000232287.2 ENST00000414969.2 chr3:11047784-11060910 3 581 12541 intronic 4.29 0 0,0,0 0 0,0,0 0 30.3172793238179 11.507 0 26.4226138266486 7.87 0 30.4259628418786 10.109 0 0 chimp,horse,human,macaque,marmoset,orangutan, antisense antisense A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000224386.1 ENST00000426495.1 chr3:11760915-11770134 2 408 8809 exonic 0 0 0,1,0 0 0,0,0 0 17.431490521058 0 44.3112745098039 18.7308434555568 24.723 57.468137254902 18.2760812805086 23.422 0 0 chimp,human,macaque,marmoset,orangutan,pig, lincRNA lincRNA A549@0.013474,AG04450@0.0172325,BJ@0.0540435,GM12878@0,H1HESC@0.016155,HELAS3@0.006473,HEPG2@0,HMEC@0,HSMM@0.048956,HUVEC@0.0217755,K562@0,MCF7@0.029533,NHEK@0,NHLF@0,SKNSHRA@0.0110675, 0 0 0 0 ENSG00000225526.1 ENST00000447550.1 chr3:12595267-12602519 2 629 6621 intronic 2.52 0 0,0,0 0 0,0,0 0 4.19211599456276 0 0 14.30161607008 11.36 0 13.3901223380154 11.72 0 0 chimp,human,marmoset,orangutan, antisense antisense A549@0,AG04450@0,BJ@0,GM12878@0.0938915,H1HESC@0,HELAS3@0.0568285,HEPG2@0.031221,HMEC@0,HSMM@0,HUVEC@0.0123175,K562@0.0312765,MCF7@0,NHEK@0,NHLF@0.003058,SKNSHRA@0.030037, 0 0 0 0 ENSG00000232746.1 ENST00000448129.1 chr3:12919021-12926710 3 632 7053 intergenic 4.20 0 0,1,1 0 0,0,0 0 0 0 0 0 0 0 0 0 0 0 chimp,human,macaque, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0.01972,HEPG2@0.0067105,HMEC@0,HSMM@0,HUVEC@0,K562@0.0042165,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0.004379, 0 0 0 0 ENSG00000246066.1 ENST00000499738.1 chr3:13054481-13057307 2 2520 304 intronic -1.79 0 0,0,1 0 0,0,0 0.165873015873016 26.8125 0 0.849206349206349 41.3947368421053 2.55 1.63174603174603 41.5789473684211 2.59 0 1 human,macaque,orangutan, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0.226026,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0.0094195,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000244502.2 ENST00000424112.2 chr3:13518482-13521553 2 513 2556 exonic 0 0 0,1,0 0 0,0,0 0 6.59780907668232 0 0 9.6537558685446 12.876 0 9.7726917057903 15.404 0 1 chimp,human,macaque,orangutan, antisense antisense A549@0.042949,AG04450@0.056101,BJ@0.0459765,GM12878@0.15299,H1HESC@0.277611,HELAS3@0.19007,HEPG2@0.385966,HMEC@0.031803,HSMM@0.080514,HUVEC@0.0781995,K562@0.108802,MCF7@0.252669,NHEK@0.0767563,NHLF@0.055278,SKNSHRA@0.188644, 0 0 0 0 ENSG00000224514.1 ENST00000438915.1 chr3:13692196-13788126 2 522 95406 intronic 0 1 0,1,0 0 0,0,0 114.76245210728 4.03840429323103 0 166.798850574713 5.46209881978073 0 150.093869731801 26.6100769343647 0 0 0 chimp,cow,dog,horse,human,macaque,marmoset,orangutan,panda,rabbit,rat, antisense antisense A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0.01178,HUVEC@0,K562@0.0138055,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0.135798, 0 0 0 0 ENSG00000224514.1 ENST00000419618.1 chr3:13692221-13788132 6 988 94913 intronic 6.05 1 0,1,0 0 0,0,0 62.9959514170041 4.05938069600582 0 90.9929149797571 5.4904702200963 0 82.3431174089069 26.7482958077397 0 0 0 chimp,human,macaque,orangutan, antisense antisense A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0.01178,HUVEC@0,K562@0.0138055,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0.135798, 0 0 0 0 ENSG00000250439.1 ENST00000502451.1 chr3:13974553-13978444 2 3375 514 intergenic 26.13 0 0,0,0 0 0,0,0 0 0 0 0 0 0 169.529481481481 28.3696498054475 92.214 0 0 human, processed_transcript processed_transcript A549@0,AG04450@0,BJ@0.002018,GM12878@0,H1HESC@0.00176,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0.004228,HUVEC@0.0015815,K562@0.001147,MCF7@0,NHEK@0.0193093,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000228242.1 ENST00000428681.1 chr3:14186320-14187021 2 474 225 exonic -6.02 0 0,0,1 0 0,0,0 0 0 0 0 46.5422222222222 22.702 0 68.0888888888889 23.515 0 0 chimp,human,macaque,marmoset,orangutan, antisense antisense A549@0.0498205,AG04450@0.0594875,BJ@0.131786,GM12878@0.027501,H1HESC@0,HELAS3@0.320683,HEPG2@0.238814,HMEC@0.015912,HSMM@0.0179315,HUVEC@0.361721,K562@0.023202,MCF7@0.121518,NHEK@0.015965,NHLF@0.0033935,SKNSHRA@0.086486, 0 0 0 0 ENSG00000228242.1 ENST00000420253.1 chr3:14186490-14189784 3 572 2718 exonic 2.76 0 0,0,0 0 0,0,0 0 28.6111111111111 0 14.4493006993007 40.2358351729213 22.702 26.8986013986014 44.5 23.515 0 0 cat,chimp,human,macaque,marmoset,orangutan, antisense antisense A549@0.0498205,AG04450@0.0594875,BJ@0.131786,GM12878@0.027501,H1HESC@0,HELAS3@0.320683,HEPG2@0.238814,HMEC@0.015912,HSMM@0.0179315,HUVEC@0.361721,K562@0.023202,MCF7@0.121518,NHEK@0.015965,NHLF@0.0033935,SKNSHRA@0.086486, 0 0 0 0 ENSG00000255021.1 ENST00000525575.1 chr3:14313873-14345345 2 611 30859 intergenic 4.30 0 0,0,1 0 0,0,0 0 5.06377393953142 0 0 6.23263877636994 0 0 6.45163485530963 0 0 1 chimp,human,orangutan, lincRNA lincRNA A549@0,AG04450@0,BJ@0.0116735,GM12878@0,H1HESC@0.0274655,HELAS3@0.017318,HEPG2@0.026699,HMEC@0,HSMM@0,HUVEC@0,K562@0.011943,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0.0037075, 0 0 0 0 ENSG00000251576.1 ENST00000502417.1 chr3:14389951-14394068 3 2281 1832 intergenic 8.16 0 0,0,0 0 0,0,0 0 0 0 0 0 0 0 0 0 1 1 chimp,human,macaque,marmoset,orangutan, lincRNA non_coding A549@0.0032595,AG04450@0,BJ@0.002156,GM12878@0.0020525,H1HESC@0.002167,HELAS3@0.013961,HEPG2@0.0023885,HMEC@0,HSMM@0.003992,HUVEC@0,K562@0.0379685,MCF7@0.0009,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000144596.7 ENST00000443613.2 chr3:14530619-14581836 24 7686 43485 exonic 331.03 0 0,0,1 1 0,1,1 101.676945094978 13.0141658043003 66.912 165.555165235493 10.5009543520754 42.283 201.042024460057 11.8964930435782 42.796 0 0 chimp,human,panda, antisense retained_intron A549@0.206729,AG04450@0.007627,BJ@0.109024,GM12878@0,H1HESC@1.3077,HELAS3@0.0584225,HEPG2@0.0411585,HMEC@0.004642,HSMM@0.222483,HUVEC@0.001928,K562@0.0034435,MCF7@0.0138235,NHEK@0.0216383,NHLF@0.081443,SKNSHRA@0.328064, 0 0 0 0 ENSG00000144596.7 ENST00000273083.3 chr3:14530619-14581881 24 7727 43489 exonic 217.13 0 0,0,1 1 0,1,1 103.346835770674 13.0425854813861 48.552 164.662093956257 10.5146588792568 41.861 199.927268021224 11.9139322587321 42.377 0 0 chimp,human,panda, antisense antisense A549@0.206729,AG04450@0.007627,BJ@0.109024,GM12878@0,H1HESC@1.3077,HELAS3@0.0584225,HEPG2@0.0411585,HMEC@0.004642,HSMM@0.222483,HUVEC@0.001928,K562@0.0034435,MCF7@0.0138235,NHEK@0.0216383,NHLF@0.081443,SKNSHRA@0.328064, 0 0 0 0 ENSG00000144596.7 ENST00000430219.1 chr3:14532678-14554366 11 4260 17408 intergenic 89.21 1 0,0,1 0 0,1,1 89.3471830985915 5.05899586397059 0 148.521361502347 6.07479319852941 69.713 191.132159624413 7.54658777573529 70.217 0 0 chimp,human,macaque,orangutan,panda, antisense antisense A549@0.206729,AG04450@0.007627,BJ@0.109024,GM12878@0,H1HESC@1.3077,HELAS3@0.0584225,HEPG2@0.0411585,HMEC@0.004642,HSMM@0.222483,HUVEC@0.001928,K562@0.0034435,MCF7@0.0138235,NHEK@0.0216383,NHLF@0.081443,SKNSHRA@0.328064, 0 0 0 0 ENSG00000144596.7 ENST00000507975.1 chr3:14535173-14583588 25 3401 44966 intergenic 6.38 0 0,0,0 0 0,1,1 180.907380182299 13.5201040786372 0 332.982652161129 22.3587821909888 18.3 397.562481623052 23.6220922474759 19.628 0 0 cat,chimp,cow,dog,elephant,guinea_pig,horse,human,macaque,marmoset,orangutan,panda,pig,rabbit, antisense retained_intron A549@0.206729,AG04450@0.007627,BJ@0.109024,GM12878@0,H1HESC@1.3077,HELAS3@0.0584225,HEPG2@0.0411585,HMEC@0.004642,HSMM@0.222483,HUVEC@0.001928,K562@0.0034435,MCF7@0.0138235,NHEK@0.0216383,NHLF@0.081443,SKNSHRA@0.328064, 0 0 0 0 ENSG00000144596.7 ENST00000383795.1 chr3:14545413-14581836 21 2625 33758 intergenic -0.29 0 0,0,0 1 0,1,1 200.264 11.5088275371764 66.912 387.065523809524 9.5550980508324 42.283 452.290666666667 10.410835949997 42.796 0 0 cat,chimp,cow,dog,elephant,guinea_pig,horse,human,macaque,marmoset,orangutan,panda,pig,rabbit, antisense retained_intron A549@0.206729,AG04450@0.007627,BJ@0.109024,GM12878@0,H1HESC@1.3077,HELAS3@0.0584225,HEPG2@0.0411585,HMEC@0.004642,HSMM@0.222483,HUVEC@0.001928,K562@0.0034435,MCF7@0.0138235,NHEK@0.0216383,NHLF@0.081443,SKNSHRA@0.328064, 0 0 0 0 ENSG00000144596.7 ENST00000422481.1 chr3:14562199-14567490 3 4113 1174 intergenic 9.51 0 0,0,0 0 0,1,1 71.6727449550207 4.79131175468484 0 82.2455628495016 3.8160136286201 2.629 93.3839046924386 5.15332197614991 2.673 0 1 chimp,human,macaque,marmoset, antisense retained_intron A549@0.206729,AG04450@0.007627,BJ@0.109024,GM12878@0,H1HESC@1.3077,HELAS3@0.0584225,HEPG2@0.0411585,HMEC@0.004642,HSMM@0.222483,HUVEC@0.001928,K562@0.0034435,MCF7@0.0138235,NHEK@0.0216383,NHLF@0.081443,SKNSHRA@0.328064, 0 0 0 0 ENSG00000144596.7 ENST00000413414.1 chr3:14562199-14581850 5 3440 16203 intergenic 48.71 0 0,0,0 1 0,1,1 85.255523255814 16.2815527988644 61.2 100.628779069767 11.1246065543418 41.861 113.515988372093 12.5110781953959 42.377 0 1 chimp,human,macaque,marmoset, antisense retained_intron A549@0.206729,AG04450@0.007627,BJ@0.109024,GM12878@0,H1HESC@1.3077,HELAS3@0.0584225,HEPG2@0.0411585,HMEC@0.004642,HSMM@0.222483,HUVEC@0.001928,K562@0.0034435,MCF7@0.0138235,NHEK@0.0216383,NHLF@0.081443,SKNSHRA@0.328064, 0 0 0 0 ENSG00000235629.1 ENST00000424242.1 chr3:14689701-14690939 2 444 792 intergenic 0 1 0,0,0 0 0,0,0 55.981981981982 0 0 11.4864864864865 0 0 12.2522522522523 5.52272727272727 0 0 0 cat,chimp,cow,dog,elephant,human,macaque,marmoset,orangutan,panda,rat, antisense antisense A549@0.100075,AG04450@0.0727515,BJ@0.0108515,GM12878@0.510498,H1HESC@0.0130505,HELAS3@0.0748125,HEPG2@0.0591375,HMEC@0,HSMM@0.0138405,HUVEC@0.026576,K562@0.122443,MCF7@0.182379,NHEK@0.0448873,NHLF@0,SKNSHRA@0.090194, 0 0 0 0 ENSG00000230172.1 ENST00000422657.1 chr3:14806459-14808947 2 1145 1341 intronic 7.20 0 0,0,1 0 0,0,0 0 0 66.218 0 0 0 0 0 6.985 0 0 chimp,human,marmoset,orangutan, antisense antisense A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000225733.1 ENST00000430166.1 chr3:14961854-14989931 6 1178 26889 exonic 9.08 0 0,1,0 1 0,0,0 52.258064516129 15.2895607869389 0 101.880305602716 23.8102941723381 11.525 119.385398981324 27.2829409795827 17.15 0 0 cat,chimp,dog,human,macaque,marmoset,orangutan,rabbit, antisense antisense A549@25.6069,AG04450@17.4204,BJ@14.372,GM12878@14.4747,H1HESC@13.6947,HELAS3@31.4029,HEPG2@14.3453,HMEC@10.5566,HSMM@16.5922,HUVEC@17.767,K562@30.105,MCF7@25.6457,NHEK@15.2372,NHLF@21.8346,SKNSHRA@21.6234, 0 0 0 0 ENSG00000225733.1 ENST00000424349.1 chr3:14984291-14989014 2 3790 931 intergenic 7.05 0 1,1,1 1 0,0,0 8.63746701846966 25.5725026852846 0 13.4738786279683 27.8410311493018 210.57 15.4986807387863 30.4189044038668 271.994 0 0 human,macaque,marmoset,orangutan, antisense antisense A549@25.6069,AG04450@17.4204,BJ@14.372,GM12878@14.4747,H1HESC@13.6947,HELAS3@31.4029,HEPG2@14.3453,HMEC@10.5566,HSMM@16.5922,HUVEC@17.767,K562@30.105,MCF7@25.6457,NHEK@15.2372,NHLF@21.8346,SKNSHRA@21.6234, 0 0 0 0 ENSG00000225733.1 ENST00000417835.1 chr3:14986187-14989400 2 1628 1583 exonic 7.05 0 0,1,1 1 0,0,0 20.1081081081081 15.0397978521794 0 84.2536855036855 105.15666456096 65.232 41.1609336609337 109.322173089071 110.502 0 0 chimp,human,macaque,marmoset,orangutan, antisense antisense A549@25.6069,AG04450@17.4204,BJ@14.372,GM12878@14.4747,H1HESC@13.6947,HELAS3@31.4029,HEPG2@14.3453,HMEC@10.5566,HSMM@16.5922,HUVEC@17.767,K562@30.105,MCF7@25.6457,NHEK@15.2372,NHLF@21.8346,SKNSHRA@21.6234, 0 0 0 0 ENSG00000225733.1 ENST00000426200.1 chr3:14986200-14989931 2 1872 1857 intronic 7.05 0 1,1,1 1 0,0,0 17.4871794871795 12.8206785137318 0 45.0192307692308 104.719978459882 11.525 53.3199786324786 131.887991383953 17.15 0 0 chimp,human,macaque,marmoset, antisense antisense A549@25.6069,AG04450@17.4204,BJ@14.372,GM12878@14.4747,H1HESC@13.6947,HELAS3@31.4029,HEPG2@14.3453,HMEC@10.5566,HSMM@16.5922,HUVEC@17.767,K562@30.105,MCF7@25.6457,NHEK@15.2372,NHLF@21.8346,SKNSHRA@21.6234, 0 0 0 0 ENSG00000225733.1 ENST00000440079.1 chr3:14986531-14989012 2 1525 954 intergenic 7.05 0 1,1,1 1 0,0,0 21.4662295081967 24.9559748427673 0 28.5940983606557 27.1698113207547 211.708 32.0111475409836 29.685534591195 273.22 0 0 chimp,human,macaque,marmoset,orangutan, antisense antisense A549@25.6069,AG04450@17.4204,BJ@14.372,GM12878@14.4747,H1HESC@13.6947,HELAS3@31.4029,HEPG2@14.3453,HMEC@10.5566,HSMM@16.5922,HUVEC@17.767,K562@30.105,MCF7@25.6457,NHEK@15.2372,NHLF@21.8346,SKNSHRA@21.6234, 0 0 0 0 ENSG00000224660.1 ENST00000420195.1 chr3:15295691-15306000 3 5567 4738 exonic 5.48 1 0,0,1 0 0,0,0 96.3941081372373 11.4871253693542 0 60.7883959044369 13.9508231321233 0 75.2588467756422 16.698607007176 0 0 0 chimp,human,orangutan, lincRNA processed_transcript A549@1.5658,AG04450@2.45547,BJ@3.25294,GM12878@2.22138,H1HESC@1.11483,HELAS3@2.87627,HEPG2@4.21948,HMEC@1.5448,HSMM@1.52017,HUVEC@3.41622,K562@1.86503,MCF7@4.14311,NHEK@1.41665,NHLF@0.928246,SKNSHRA@3.7077, 0 0 0 0 ENSG00000224660.1 ENST00000413977.1 chr3:15298958-15300460 2 562 938 exonic -1.11 0 0,0,1 0 0,0,0 41.1387900355872 0 134.392 57.2402135231317 0 104.969 78.3451957295374 0 115.434 0 0 cat,chimp,cow,dog,guinea_pig,horse,human,orangutan,panda, lincRNA processed_transcript A549@1.5658,AG04450@2.45547,BJ@3.25294,GM12878@2.22138,H1HESC@1.11483,HELAS3@2.87627,HEPG2@4.21948,HMEC@1.5448,HSMM@1.52017,HUVEC@3.41622,K562@1.86503,MCF7@4.14311,NHEK@1.41665,NHLF@0.928246,SKNSHRA@3.7077, 0 0 0 0 ENSG00000224660.1 ENST00000436602.1 chr3:15298962-15300563 3 735 862 exonic 2.41 0 0,0,1 0 0,0,0 42.9278911564626 0 134.392 97.4258503401361 0 104.969 128.209523809524 0 115.434 0 0 chimp,dog,elephant,guinea_pig,horse,human,opossum,orangutan, lincRNA processed_transcript A549@1.5658,AG04450@2.45547,BJ@3.25294,GM12878@2.22138,H1HESC@1.11483,HELAS3@2.87627,HEPG2@4.21948,HMEC@1.5448,HSMM@1.52017,HUVEC@3.41622,K562@1.86503,MCF7@4.14311,NHEK@1.41665,NHLF@0.928246,SKNSHRA@3.7077, 0 0 0 0 ENSG00000249786.1 ENST00000494875.2 chr3:15480576-15482101 2 467 1056 exonic -2.14 0 0,0,0 0 0,0,0 66.1477516059957 12.4119318181818 34 100.201284796574 28.8229166666667 36.941 103.237687366167 20.9242424242424 34.606 0 0 cat,chimp,cow,dog,elephant,guinea_pig,horse,human,macaque,marmoset,orangutan,panda,pig,rabbit,rat, antisense antisense A549@0.0315525,AG04450@0,BJ@0,GM12878@0.0348785,H1HESC@0.004423,HELAS3@0.0099665,HEPG2@0.0137245,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0.0083205,SKNSHRA@0.024205, 0 0 0 0 ENSG00000233570.1 ENST00000429949.1 chr3:16577827-16582880 3 1362 3687 intergenic -1.97 0 0,0,0 0 0,0,0 13.1718061674009 7.36398155682126 0 19.424375917768 3.22674260916734 0 22.3935389133627 56.1513425549227 4.131 0 0 cat,chimp,cow,elephant,guinea_pig,horse,human,macaque,marmoset,mouse,orangutan,panda, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0.004285,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000229271.1 ENST00000426218.1 chr3:16729493-16738986 3 408 9081 intergenic -1.69 1 0,0,0 0 0,0,0 0 0 0 0 13.6220680541791 0 11.6764705882353 113.371655104063 0 0 0 chimp,human,macaque,marmoset,orangutan, processed_transcript processed_transcript A549@0,AG04450@0,BJ@0,GM12878@0.005703,H1HESC@0.157218,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0.0046945,SKNSHRA@0, 0 0 0 0 ENSG00000226441.1 ENST00000414844.1 chr3:17084268-17085684 2 275 1139 exonic -9.47 1 0,0,1 0 0,0,0 95.4181818181818 12.6707638279192 0 58.4363636363636 19.1975417032485 5.657 64.0545454545455 15.8744512730465 18.866 0 0 chimp,dog,elephant,horse,human,marmoset,orangutan,panda,rat, antisense antisense A549@0.031345,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0.0290325,NHEK@0,NHLF@0.0139315,SKNSHRA@0.0470455, 0 0 0 0 ENSG00000226238.1 ENST00000449613.1 chr3:18031515-18037036 2 456 5063 intergenic -0.81 0 0,0,1 0 0,0,0 0 45.8996642306933 0 0 69.1870432549872 0 0 68.8504839028244 0 0 0 chimp,guinea_pig,horse,human,macaque,marmoset,orangutan,rabbit, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0.546825,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0.170457,MCF7@0.0089785,NHEK@0,NHLF@0,SKNSHRA@0.048572, 0 0 0 0 ENSG00000228956.1 ENST00000414198.1 chr3:18486516-18568000 5 732 80744 intronic -2.14 0 0,1,0 0 0,0,0 158.871584699454 25.1248637669672 102.369 165.475409836066 29.517152977311 146.701 56.9877049180328 31.6329015159021 123.081 0 0 chimp,human,macaque,marmoset,orangutan, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0.292262,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0.105553, 0 0 0 0 ENSG00000228956.1 ENST00000438418.1 chr3:18504392-18505831 2 697 740 intergenic -0.70 0 0,1,0 0 0,0,0 0 0 0 2.26398852223816 0 1.673 2.34146341463415 2.29864864864865 7.315 0 0 cat,chimp,cow,elephant,guinea_pig,horse,human,macaque,marmoset,orangutan,panda,pig,rabbit, lincRNA retained_intron A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0.292262,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0.105553, 0 0 0 0 ENSG00000228956.1 ENST00000456253.1 chr3:18507447-18568819 4 536 60830 intergenic -5.77 0 0,0,0 0 0,0,0 11.5671641791045 30.2233766233766 0 43.1735074626866 33.4773138254151 0 55.2201492537313 35.3919776426106 0 0 0 chimp,cow,dog,elephant,guinea_pig,horse,human,macaque,marmoset,mouse,orangutan,pig,rabbit, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0.292262,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0.105553, 0 0 0 0 ENSG00000233386.2 ENST00000425799.2 chr3:18735379-18959184 8 603 223188 intergenic 0.85 0 0,0,1 0 0,0,0 0 53.2029458802026 0 31.3763250883392 55.7898596495944 0 31.3586572438163 55.0830544692174 0 0 0 chimp,dog,horse,human,macaque,marmoset,orangutan, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000233386.2 ENST00000453361.1 chr3:18787236-18788983 3 723 1020 intergenic -8.03 0 0,0,1 0 0,0,0 0 0 53.317 3.43015214384509 0 113.328 3.58229598893499 0 141.297 0 0 cat,chimp,cow,dog,elephant,guinea_pig,horse,human,macaque,marmoset,orangutan, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000237485.1 ENST00000448208.1 chr3:20215736-20227919 3 816 11363 exonic 0 0 0,1,0 0 0,0,0 28.4240196078431 13.3967262166681 17.952 49.9975490196078 18.9405086684854 29.181 54.6580882352941 19.0466426119863 28.517 0 0 chimp,dog,elephant,guinea_pig,horse,human,marmoset,orangutan,panda,pig,rabbit, antisense antisense A549@0.0190215,AG04450@0,BJ@0.0131695,GM12878@0.0584755,H1HESC@0.0035535,HELAS3@0.006481,HEPG2@0.005932,HMEC@0,HSMM@0.0027835,HUVEC@0.03428,K562@0.004653,MCF7@0.002455,NHEK@0.00321667,NHLF@0,SKNSHRA@0.002775, 0 0 0 0 ENSG00000237485.1 ENST00000441442.1 chr3:20215778-20227607 4 495 11328 exonic 0 0 0,1,1 0 0,0,0 23.7777777777778 13.4381179378531 29.376 54.0141414141414 18.9990289548023 30.626 61.3010101010101 19.105490819209 30.182 0 0 cat,chimp,cow,dog,elephant,guinea_pig,horse,human,macaque,marmoset,orangutan,panda,pig,rabbit, antisense antisense A549@0.0190215,AG04450@0,BJ@0.0131695,GM12878@0.0584755,H1HESC@0.0035535,HELAS3@0.006481,HEPG2@0.005932,HMEC@0,HSMM@0.0027835,HUVEC@0.03428,K562@0.004653,MCF7@0.002455,NHEK@0.00321667,NHLF@0,SKNSHRA@0.002775, 0 0 0 0 ENSG00000231304.1 ENST00000455626.1 chr3:20383960-20392420 5 2036 6416 intergenic 0.96 1 0,0,0 0 0,0,0 17.7681728880157 6.49329800498753 0 1.76080550098232 7.54925187032419 0 5.22642436149312 7.85754364089776 0 0 0 chimp,human,macaque,marmoset,orangutan, lincRNA lincRNA A549@0,AG04450@0,BJ@0.003171,GM12878@0.0314545,H1HESC@0.009127,HELAS3@0.00409,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0.001458,K562@0.021651,MCF7@0,NHEK@0.000954667,NHLF@0,SKNSHRA@0.002227, 0 0 0 0 ENSG00000225542.1 ENST00000412369.1 chr3:21584308-21621451 3 702 36437 intronic -4.52 0 0,1,0 1 0,0,0 0 9.21025331393913 0 0 12.461234459478 0 0 10.392513104811 0 0 0 chimp,dog,horse,human,macaque,marmoset,orangutan,panda, antisense antisense A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0.307783,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0.0075755,K562@10.927,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000223351.1 ENST00000448980.1 chr3:21984058-22003032 4 366 18602 intergenic 3.36 0 0,0,0 0 0,0,0 127.989071038251 10.6300397806687 19.598 141.306010928962 20.4131813783464 21.643 123.387978142076 23.5117729276422 22.882 0 0 cat,chimp,cow,dog,elephant,guinea_pig,horse,human,macaque,marmoset,opossum,orangutan,panda,pig,platypus,rabbit,rat, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000223351.1 ENST00000436306.1 chr3:21998628-22021320 4 420 22266 intergenic -15.27 1 0,0,0 0 0,0,0 0 0.42351567412198 0 0 0 0 0 0.950642234797449 0 0 0 chimp,dog,human,macaque,marmoset,orangutan,pig, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000233153.1 ENST00000452251.1 chr3:23236561-23244024 2 485 6976 intergenic -7.64 1 0,1,0 0 0,0,0 0 1.22835435779817 155.887 0 0.782110091743119 118.011 0 0.830561926605505 133.862 0 0 cat,chimp,dog,horse,human,macaque,marmoset,orangutan,panda, antisense antisense A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0.0041285,NHEK@0,NHLF@0,SKNSHRA@0.0093175, 0 0 0 0 ENSG00000233153.1 ENST00000421375.1 chr3:23236561-23244034 2 495 6976 intergenic -7.64 1 0,1,0 0 0,0,0 0 1.22835435779817 155.887 0 0.782110091743119 118.011 0 0.830561926605505 133.862 0 0 cat,chimp,dog,horse,human,marmoset,orangutan,panda, antisense antisense A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0.0041285,NHEK@0,NHLF@0,SKNSHRA@0.0093175, 0 0 0 0 ENSG00000233153.1 ENST00000430018.1 chr3:23236561-23244069 2 497 7009 intergenic -7.64 1 0,1,0 0 0,0,0 0 1.22257098016836 155.887 0 0.778427735768298 118.011 0 0.826651448138108 133.862 0 0 cat,chimp,dog,horse,human,macaque,marmoset,orangutan,panda, antisense antisense A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0.0041285,NHEK@0,NHLF@0,SKNSHRA@0.0093175, 0 0 0 0 ENSG00000223791.1 ENST00000426702.1 chr3:23845515-23848396 2 776 2103 intronic 0.78 0 0,1,0 0 0,0,0 67.680412371134 129.952924393723 177.478 23.4020618556701 104.16547788873 160.466 26.3286082474227 83.0142653352354 177.221 0 0 cat,chimp,cow,dog,elephant,guinea_pig,horse,human,macaque,marmoset,orangutan,panda,rabbit, antisense antisense A549@0.0098905,AG04450@0.0146965,BJ@0.028048,GM12878@0.0866545,H1HESC@0.120054,HELAS3@0.023833,HEPG2@0.097313,HMEC@0,HSMM@0.024373,HUVEC@0.0170265,K562@0.095842,MCF7@0.010571,NHEK@0.0149353,NHLF@0.024968,SKNSHRA@0.224263, 0 0 0 0 ENSG00000224074.2 ENST00000436123.1 chr3:24137760-24144714 4 2960 3988 intergenic 3.60 0 0,0,0 0 0,0,0 8.52972972972973 0 33.023 2.92297297297297 0 14.992 1.31756756756757 0 24.726 0 0 chimp,human,marmoset,orangutan, processed_transcript processed_transcript A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0.0031075,HEPG2@0,HMEC@0,HSMM@0.0024095,HUVEC@0,K562@0,MCF7@0.002381,NHEK@0.001144,NHLF@0.0047995,SKNSHRA@0, 0 0 0 0 ENSG00000224074.2 ENST00000432505.1 chr3:24141465-24144729 2 2230 1032 intergenic 2.79 0 0,0,0 0 0,0,0 8.10807174887892 0 28.718 3.87982062780269 0 14.992 1.74887892376682 0 24.726 0 0 chimp,human,marmoset,orangutan, processed_transcript processed_transcript A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0.0031075,HEPG2@0,HMEC@0,HSMM@0.0024095,HUVEC@0,K562@0,MCF7@0.002381,NHEK@0.001144,NHLF@0.0047995,SKNSHRA@0, 0 0 0 0 ENSG00000224074.2 ENST00000428244.1 chr3:24141466-24144738 2 1706 1564 intergenic 2.79 0 0,0,0 0 0,0,0 12.1125439624853 0 26.135 5.0715123094959 0 14.992 2.28604923798359 0 24.726 0 0 chimp,human,macaque,marmoset,orangutan, processed_transcript processed_transcript A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0.0031075,HEPG2@0,HMEC@0,HSMM@0.0024095,HUVEC@0,K562@0,MCF7@0.002381,NHEK@0.001144,NHLF@0.0047995,SKNSHRA@0, 0 0 0 0 ENSG00000224822.1 ENST00000425296.1 chr3:24496627-24500925 2 1752 2544 intronic 2.93 0 0,0,1 0 0,0,0 0 0 0 5.53767123287671 3.17610062893082 0 6.52054794520548 4.72405660377358 0 0 0 chimp,human,macaque,marmoset,orangutan, sense_intronic sense_intronic A549@0.014107,AG04450@0,BJ@0.0161735,GM12878@0,H1HESC@0.067841,HELAS3@0.0882945,HEPG2@0.0902895,HMEC@0.004748,HSMM@0,HUVEC@0.003068,K562@0.54305,MCF7@0.17063,NHEK@0.0722443,NHLF@0,SKNSHRA@0.0014275, 0 0 0 0 ENSG00000228791.1 ENST00000432368.1 chr3:24535578-24541502 2 883 5039 intronic 7.66 0 0,0,0 0 0,0,0 241.118912797282 77.1232387378448 73.994 98.0736126840317 38.5286763246676 26.906 95.4643261608154 36.6481444731097 5.41 0 0 chimp,horse,human,macaque,marmoset,orangutan, lincRNA lincRNA A549@0.0142685,AG04450@0,BJ@0.005469,GM12878@0,H1HESC@0.015872,HELAS3@0.0269975,HEPG2@0.094221,HMEC@0,HSMM@0,HUVEC@0,K562@0.114441,MCF7@0.0678185,NHEK@0.00935333,NHLF@0.006565,SKNSHRA@0, 0 0 0 0 ENSG00000228791.1 ENST00000438096.1 chr3:24535799-24538672 2 700 2171 intronic -5.72 0 0,1,0 0 0,0,0 170.172857142857 168.394288346384 190.461 88.6728571428571 68.0069092584063 75.814 88.2557142857143 63.6526946107785 62.871 0 0 chimp,dog,elephant,guinea_pig,human,orangutan,panda, lincRNA lincRNA A549@0.0142685,AG04450@0,BJ@0.005469,GM12878@0,H1HESC@0.015872,HELAS3@0.0269975,HEPG2@0.094221,HMEC@0,HSMM@0,HUVEC@0,K562@0.114441,MCF7@0.0678185,NHEK@0.00935333,NHLF@0.006565,SKNSHRA@0, 0 0 0 0 ENSG00000237838.1 ENST00000455576.1 chr3:24729410-25215796 6 578 485798 intergenic -0.18 0 0,0,1 0 0,0,0 0 31.6733292438421 78.455 5.69896193771626 30.7452459664305 132.137 5.5242214532872 30.9660929028114 132.02 0 0 chimp,cow,dog,elephant,guinea_pig,horse,human,macaque,marmoset,orangutan,rabbit, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0.0118437,NHLF@0,SKNSHRA@0.0086465, 0 0 0 0 ENSG00000225386.1 ENST00000435884.1 chr3:26660821-26664181 4 450 2904 intergenic -3.91 0 0,0,0 0 0,0,0 0 19.2203856749311 186.057 8.93555555555556 46.327479338843 125.351 23.2711111111111 43.8161157024793 116.618 0 0 cat,chimp,cow,dog,horse,human,macaque,marmoset,orangutan,panda, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0.035989,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0.0090645,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000234165.1 ENST00000446601.1 chr3:26753798-26754855 2 580 475 intergenic -2.90 0 0,0,0 0 0,0,0 0 0 0 22.5551724137931 7.04421052631579 0 22.2879310344828 7.3978947368421 0 0 0 chimp,elephant,guinea_pig,human,macaque,marmoset,orangutan,panda,pig,rabbit, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0.071146,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0.0034545,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000225548.1 ENST00000425195.1 chr3:27844253-27901816 4 487 57070 intergenic -2.22 0 0,0,1 0 0,0,0 0 8.9948309094095 111.296 0 10.0865778868057 142.386 0 11.8693183809357 139.699 0 0 chimp,dog,elephant,guinea_pig,horse,human,macaque,marmoset,orangutan,panda, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0.0041055,H1HESC@0.369253,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0.008964,K562@0.361279,MCF7@0.011923,NHEK@0.199214,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000225548.1 ENST00000414382.1 chr3:27862979-27932792 3 540 69269 intergenic 1.36 0 0,1,0 1 0,0,0 0 9.92865495387547 0 0 13.06285640041 0 0 14.5760441178594 0 0 0 chimp,dog,human,macaque, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0.0041055,H1HESC@0.369253,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0.008964,K562@0.361279,MCF7@0.011923,NHEK@0.199214,NHLF@0,SKNSHRA@0, 28 4 0 0 ENSG00000225548.1 ENST00000455984.1 chr3:27863089-27901683 3 329 38261 intergenic -2.22 0 0,0,0 0 0,0,0 0 4.82399832727843 0 0 8.35932150231306 0 0 10.4288178563028 0 0 0 chimp,human,macaque,marmoset,orangutan, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0.0041055,H1HESC@0.369253,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0.008964,K562@0.361279,MCF7@0.011923,NHEK@0.199214,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000229243.1 ENST00000432163.1 chr3:27872379-27875627 2 2831 415 intergenic 1.67 1 0,0,0 0 0,0,0 0 0 0 9.92405510420346 6.57349397590361 3.346 18.674673260332 6.86506024096386 4.016 0 0 cat,chimp,dog,guinea_pig,horse,human,macaque,orangutan, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0.076379,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0.0014525,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000235493.1 ENST00000356047.3 chr3:28038701-28070095 2 753 30639 intergenic -3.30 0 0,1,0 0 0,0,0 31.8140770252324 14.7921929566892 106.672 1.15803452855246 13.6159469956591 101.092 0 13.9857697705539 105.143 0 0 chimp,elephant,guinea_pig,horse,human,macaque,marmoset,orangutan,pig, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0.104141,H1HESC@0.042474,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 110 2 0 0 ENSG00000235493.1 ENST00000437506.1 chr3:28039035-28070094 3 512 30543 intergenic 1.69 0 0,1,0 0 0,0,0 45.90625 14.8386864420653 107.124 0.8515625 13.6587434109289 101.528 0 14.0297285793799 105.143 0 0 chimp,elephant,guinea_pig,horse,human,macaque,marmoset,orangutan,pig, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0.104141,H1HESC@0.042474,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000228214.1 ENST00000432518.1 chr3:28616282-28799296 5 1604 181402 exonic 18.50 0 0,0,1 0 0,0,0 188.928304239402 24.6036868391749 79.318 192.710099750623 21.6905216039515 74.959 186.327930174564 22.0511460733619 69.77 0 0 chimp,dog,horse,human,macaque,marmoset,orangutan,panda, antisense antisense A549@0,AG04450@0.0184445,BJ@0.004538,GM12878@0.0029135,H1HESC@0.325059,HELAS3@0.012826,HEPG2@0.019618,HMEC@0,HSMM@0.174725,HUVEC@0.010041,K562@0.001443,MCF7@0,NHEK@0.0130543,NHLF@0,SKNSHRA@0.112653, 0 0 0 0 ENSG00000228214.1 ENST00000443912.1 chr3:28617902-28799028 4 558 180562 exonic 8.75 0 0,0,0 0 0,0,0 93.2258064516129 23.7935778292221 356.762 82.3118279569892 21.3527209490369 287.393 77.2741935483871 22.0182153498521 224.269 0 0 chimp,cow,dog,elephant,human,macaque,marmoset,mouse,orangutan,panda,pig,rabbit,rat, antisense antisense A549@0,AG04450@0.0184445,BJ@0.004538,GM12878@0.0029135,H1HESC@0.325059,HELAS3@0.012826,HEPG2@0.019618,HMEC@0,HSMM@0.174725,HUVEC@0.010041,K562@0.001443,MCF7@0,NHEK@0.0130543,NHLF@0,SKNSHRA@0.112653, 0 0 0 0 ENSG00000228214.1 ENST00000445077.1 chr3:28617919-28799086 3 445 180718 intergenic 4.50 0 0,0,1 0 0,0,0 93.5191011235955 23.773038656913 367.166 77.3123595505618 21.3342887814163 298.919 71.5303370786517 21.9992087119158 235.557 0 0 cat,chimp,cow,dog,guinea_pig,horse,human,macaque,marmoset,mouse,orangutan,panda,pig,rabbit,rat, antisense antisense A549@0,AG04450@0.0184445,BJ@0.004538,GM12878@0.0029135,H1HESC@0.325059,HELAS3@0.012826,HEPG2@0.019618,HMEC@0,HSMM@0.174725,HUVEC@0.010041,K562@0.001443,MCF7@0,NHEK@0.0130543,NHLF@0,SKNSHRA@0.112653, 0 0 0 0 ENSG00000235904.1 ENST00000413430.1 chr3:29305685-29332217 2 611 25919 intronic 0.10 0 0,0,1 0 0,0,0 0 59.2795246730198 136.972 0 58.1064855897218 50.972 0 59.1090319842586 61.633 0 0 cat,chimp,horse,human,macaque,marmoset,orangutan, antisense antisense A549@0.453348,AG04450@0.907384,BJ@0.132222,GM12878@0.013154,H1HESC@0.0693975,HELAS3@0.282046,HEPG2@0.0088995,HMEC@0.527692,HSMM@1.09227,HUVEC@0.461191,K562@0,MCF7@0,NHEK@0.125666,NHLF@0.811778,SKNSHRA@1.44997, 0 0 0 0 ENSG00000203506.2 ENST00000366321.2 chr3:29657466-29684300 2 580 26252 intronic 0 0 0,0,0 0 0,0,0 0 7.00620905073899 133.806 1.64827586206897 10.5017903397836 117.792 1.67586206896552 11.8828279750114 166.113 0 0 chimp,human,macaque,marmoset,orangutan, antisense antisense A549@0,AG04450@0,BJ@0,GM12878@0.0100495,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0.471172, 1 96 0 0 ENSG00000235593.1 ENST00000414547.1 chr3:29968302-29975647 3 551 6790 intronic -2.60 0 0,0,0 0 0,0,0 15.9709618874773 10.9378497790869 83.22 26.2867513611615 20.4053019145803 0 25.9981851179673 14.2748159057437 1.215 0 0 chimp,dog,elephant,guinea_pig,horse,human,macaque,marmoset,orangutan,pig,rabbit, antisense antisense A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000227260.1 ENST00000450746.1 chr3:30566237-30568677 2 434 2004 intergenic -9.34 0 0,0,1 0 0,0,0 46.5829493087558 4.0938123752495 0 5.8294930875576 1.27245508982036 6.012 6.15898617511521 1.32235528942116 5.692 0 0 chimp,human,macaque,marmoset,orangutan, lincRNA lincRNA A549@0.0126705,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0.122087,HSMM@0.110579,HUVEC@0.339932,K562@0,MCF7@0,NHEK@0.196461,NHLF@0.0089505,SKNSHRA@0, 0 0 0 0 ENSG00000227549.1 ENST00000431057.1 chr3:30566482-30567705 2 515 706 intergenic -1.63 0 0,0,0 0 0,0,0 0 0 0 0 3.61189801699717 0 0 3.75354107648725 0 0 0 chimp,dog,elephant,guinea_pig,horse,human,macaque,marmoset,orangutan,panda,pig,rabbit, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000232490.2 ENST00000455961.1 chr3:31745550-31748912 2 409 2951 intronic -5.41 0 0,0,0 0 0,0,0 0 0 0 0 3.14672992206032 0 0 3.36631650288038 0 0 0 chimp,horse,human,macaque,marmoset,orangutan,panda, antisense antisense A549@0.0234615,AG04450@0.0154455,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000232490.2 ENST00000458127.1 chr3:31745598-31746462 2 375 487 intronic -5.46 0 0,0,0 0 0,0,0 0 0 0 0 0 0 0 0 0 0 0 cat,chimp,horse,human,macaque,marmoset,orangutan,panda,pig, antisense antisense A549@0.0234615,AG04450@0.0154455,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000232490.2 ENST00000428872.2 chr3:31745705-31763072 5 533 16826 intronic -2.17 0 0,0,0 0 0,0,0 0 9.34553884562801 0 0 10.4292932295072 0 0 10.745824169292 0 0 0 chimp,dog,guinea_pig,human,macaque,marmoset,orangutan, antisense antisense A549@0.0234615,AG04450@0.0154455,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000232490.2 ENST00000418728.2 chr3:31745709-31763068 4 454 16899 intronic -5.29 0 0,0,0 0 0,0,0 0 9.30350908337772 0 0 10.3823894905024 0 0 10.6974968933073 0 0 0 chimp,elephant,guinea_pig,horse,human,macaque,marmoset,orangutan, antisense antisense A549@0.0234615,AG04450@0.0154455,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000232490.2 ENST00000447181.1 chr3:31750763-31756404 3 572 5065 intronic 0.09 0 0,0,0 0 0,0,0 59.0034965034965 0.266535044422507 61.75 77.229020979021 2.51253701875617 67.806 68.1888111888112 4.51944718657453 61.513 0 0 chimp,human,macaque,marmoset,orangutan, antisense antisense A549@0.0234615,AG04450@0.0154455,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000232490.2 ENST00000436598.1 chr3:31750814-31763144 4 509 11815 intronic -2.17 0 0,0,0 0 0,0,0 21.2180746561886 5.14769360981803 84.7 27.7721021611002 4.48641557342361 97.845 26.0275049115914 5.86677951756242 87.175 0 0 cat,chimp,dog,elephant,human,macaque,marmoset,orangutan, antisense antisense A549@0.0234615,AG04450@0.0154455,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000232490.2 ENST00000417313.2 chr3:31752099-31763066 3 472 10491 intronic -5.29 0 0,1,0 0 0,0,0 0 5.66920877025739 0 0 4.26549094375596 0 0 4.85633937082936 0 0 0 chimp,dog,elephant,guinea_pig,horse,human,macaque,marmoset,orangutan,rabbit, antisense antisense A549@0.0234615,AG04450@0.0154455,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000232490.2 ENST00000444503.1 chr3:31758483-31763069 3 523 4059 intronic -5.29 0 0,0,0 0 0,0,0 71.5869980879541 5.42744518354274 0 39.112810707457 4.88420793298842 0 42.5869980879541 5.95023404779502 0 0 0 chimp,cow,dog,guinea_pig,human,macaque,marmoset,orangutan, antisense antisense A549@0.0234615,AG04450@0.0154455,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000251224.1 ENST00000475395.2 chr3:32772127-32778946 2 464 6353 exonic 3.95 0 0,1,0 0 0,0,0 47.2952586206897 26.2704234220054 25.137 66.7349137931034 28.1909334172832 24.209 73.9655172413793 30.1468597512986 29.498 0 0 cat,chimp,dog,elephant,horse,human,macaque,marmoset,orangutan,rabbit, antisense antisense A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000226320.1 ENST00000424786.1 chr3:34200826-34604369 8 779 402750 intergenic 0.77 0 0,0,0 0 0,0,0 0 14.499339540658 0 0 16.2267535692117 0 0 17.9010726256983 2.115 0 0 chimp,dog,elephant,horse,human,macaque,marmoset,orangutan,pig, lincRNA lincRNA A549@0.005697,AG04450@0,BJ@0,GM12878@0.01976,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0.630182,K562@0.0271355,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000226320.1 ENST00000415991.1 chr3:34200874-34402551 6 586 201081 intergenic -1.91 1 0,0,0 0 0,0,0 0 19.9071767098831 0 0 19.3707212516349 0 0 21.3933638682919 2.115 0 0 chimp,human,macaque,marmoset,orangutan,panda, lincRNA lincRNA A549@0.005697,AG04450@0,BJ@0,GM12878@0.01976,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0.630182,K562@0.0271355,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000236452.1 ENST00000455974.1 chr3:34244736-34310303 2 553 65012 intergenic 0.67 0 0,0,0 0 0,0,0 0 17.441487725343 21.271 4.48462929475588 16.6658155417461 6.792 4.68354430379747 20.112379253061 6.936 0 0 chimp,cow,dog,horse,human,macaque,marmoset,orangutan,panda,pig,rabbit, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0.0499695,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0.754915,K562@0.031463,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000227498.2 ENST00000442567.2 chr3:34566310-34585372 3 571 18487 intergenic 1.45 0 0,0,0 0 0,0,0 0 7.11343105966355 12.9 5.64623467600701 21.8104614053118 33.801 6.80385288966725 22.9699248120301 39.361 0 0 chimp,dog,guinea_pig,horse,human,macaque,marmoset,orangutan, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000230830.1 ENST00000415706.1 chr3:35691689-35693453 2 540 1222 intronic -2.20 0 0,0,1 0 0,0,0 0 0 78.427 0 0 19.702 0 0 20.432 0 0 chimp,cow,elephant,horse,human,macaque,marmoset,orangutan,pig,rabbit, antisense antisense A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000242774.1 ENST00000424886.1 chr3:36810216-36825658 2 569 14871 intergenic -6.03 0 0,0,0 0 0,0,0 0 12.7295407168314 10.168 0 7.82899603254657 2.264 154.639718804921 11.8624840293188 2.4 0 0 cat,chimp,human,macaque,marmoset,mouse,orangutan, processed_transcript processed_transcript A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0.022057,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000243525.1 ENST00000449586.1 chr3:37786923-37795488 3 723 7838 intronic -7.28 1 0,0,0 0 0,0,0 0 5.82393467721357 0 2.61410788381743 19.9066088287829 0 2.69156293222683 51.4085225822914 5.271 0 0 cat,chimp,dog,elephant,guinea_pig,horse,human,macaque,marmoset,orangutan,panda, lincRNA processed_transcript A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0.0051895,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0.0004875, 0 0 0 0 ENSG00000235257.2 ENST00000438136.1 chr3:37795180-37903229 4 574 107469 exonic -4.52 0 0,1,0 1 0,0,0 4.89198606271777 10.0099563595083 315.9 0 9.50763475979119 283.411 14.2996515679443 12.7679702984116 307.143 0 0 cat,chimp,dog,horse,human,macaque,marmoset,orangutan, processed_transcript processed_transcript A549@0.402218,AG04450@0.804938,BJ@1.03675,GM12878@0.020428,H1HESC@0.426486,HELAS3@0.551793,HEPG2@1.68664,HMEC@1.01424,HSMM@2.36263,HUVEC@0.693373,K562@0.117681,MCF7@0.0113335,NHEK@0.990464,NHLF@1.1333,SKNSHRA@1.67942, 0 0 0 0 ENSG00000235257.2 ENST00000450990.1 chr3:37832242-37903239 5 557 70432 exonic 2.59 0 0,1,0 1 0,0,0 13.443447037702 8.79398568832349 311.22 2.0359066427289 9.02375340754202 281.71 16.9371633752244 11.1618014538846 305.304 0 0 chimp,human,macaque,marmoset,orangutan, processed_transcript processed_transcript A549@0.402218,AG04450@0.804938,BJ@1.03675,GM12878@0.020428,H1HESC@0.426486,HELAS3@0.551793,HEPG2@1.68664,HMEC@1.01424,HSMM@2.36263,HUVEC@0.693373,K562@0.117681,MCF7@0.0113335,NHEK@0.990464,NHLF@1.1333,SKNSHRA@1.67942, 0 0 0 0 ENSG00000235257.2 ENST00000420870.1 chr3:37832356-37903265 6 575 70324 exonic 2.59 0 0,1,0 1 0,0,0 85.335652173913 8.38439224162448 299.052 35.2069565217391 8.97043683521984 266.968 55.9739130434783 11.0769296399522 289.366 0 0 chimp,horse,human,macaque,marmoset,orangutan, processed_transcript processed_transcript A549@0.402218,AG04450@0.804938,BJ@1.03675,GM12878@0.020428,H1HESC@0.426486,HELAS3@0.551793,HEPG2@1.68664,HMEC@1.01424,HSMM@2.36263,HUVEC@0.693373,K562@0.117681,MCF7@0.0113335,NHEK@0.990464,NHLF@1.1333,SKNSHRA@1.67942, 0 0 0 0 ENSG00000235257.2 ENST00000439246.1 chr3:37847320-37862591 2 3137 12132 exonic 2.59 0 0,0,0 0 0,0,0 13.300605674211 29.0781404549951 0 6.83965572202742 25.7856083086053 0 7.69556901498247 27.7385426969997 0 1 1 chimp,human,macaque,marmoset,orangutan, processed_transcript retained_intron A549@0.402218,AG04450@0.804938,BJ@1.03675,GM12878@0.020428,H1HESC@0.426486,HELAS3@0.551793,HEPG2@1.68664,HMEC@1.01424,HSMM@2.36263,HUVEC@0.693373,K562@0.117681,MCF7@0.0113335,NHEK@0.990464,NHLF@1.1333,SKNSHRA@1.67942, 0 0 0 0 ENSG00000235257.2 ENST00000445429.1 chr3:37847569-37903219 5 527 55115 exonic 2.59 0 1,1,1 1 0,0,0 79.1726755218216 9.38971241948653 319.176 37.3358633776091 9.66999909280595 283.411 57.9582542694497 12.0894311893314 307.143 0 0 chimp,cow,horse,human,macaque,marmoset,orangutan, processed_transcript processed_transcript A549@0.402218,AG04450@0.804938,BJ@1.03675,GM12878@0.020428,H1HESC@0.426486,HELAS3@0.551793,HEPG2@1.68664,HMEC@1.01424,HSMM@2.36263,HUVEC@0.693373,K562@0.117681,MCF7@0.0113335,NHEK@0.990464,NHLF@1.1333,SKNSHRA@1.67942, 0 0 0 0 ENSG00000235257.2 ENST00000457661.1 chr3:37850203-37903271 5 489 52571 exonic 2.59 0 0,1,0 1 0,0,0 45.9386503067485 9.84409655513496 296.244 44.799591002045 10.0608510395465 263.566 64.8732106339468 12.596146164235 285.688 0 0 chimp,human,macaque,marmoset, processed_transcript processed_transcript A549@0.402218,AG04450@0.804938,BJ@1.03675,GM12878@0.020428,H1HESC@0.426486,HELAS3@0.551793,HEPG2@1.68664,HMEC@1.01424,HSMM@2.36263,HUVEC@0.693373,K562@0.117681,MCF7@0.0113335,NHEK@0.990464,NHLF@1.1333,SKNSHRA@1.67942, 0 0 0 0 ENSG00000235257.2 ENST00000429532.1 chr3:37850214-37903211 5 470 52519 exonic 2.59 0 0,1,0 1 0,0,0 49.1744680851064 9.40562463108589 319.176 53.4957446808511 29.1766408347455 283.411 60.4510638297872 26.4138121441764 309.271 0 0 cat,chimp,cow,dog,human,macaque,marmoset,orangutan, processed_transcript processed_transcript A549@0.402218,AG04450@0.804938,BJ@1.03675,GM12878@0.020428,H1HESC@0.426486,HELAS3@0.551793,HEPG2@1.68664,HMEC@1.01424,HSMM@2.36263,HUVEC@0.693373,K562@0.117681,MCF7@0.0113335,NHEK@0.990464,NHLF@1.1333,SKNSHRA@1.67942, 0 0 0 0 ENSG00000235257.2 ENST00000366441.2 chr3:37859768-37903256 4 891 42591 exonic 1.08 0 1,1,1 1 0,0,0 43.2727272727273 8.73675189594046 303.264 40.3097643097643 34.4599328496631 272.071 47.68911335578 30.9088774623747 294.883 1 1 chimp,human,macaque,marmoset,orangutan, processed_transcript retained_intron A549@0.402218,AG04450@0.804938,BJ@1.03675,GM12878@0.020428,H1HESC@0.426486,HELAS3@0.551793,HEPG2@1.68664,HMEC@1.01424,HSMM@2.36263,HUVEC@0.693373,K562@0.117681,MCF7@0.0113335,NHEK@0.990464,NHLF@1.1333,SKNSHRA@1.67942, 0 0 0 0 ENSG00000235257.2 ENST00000430620.1 chr3:37860224-37903211 5 458 42521 exonic 0 0 1,1,1 1 0,0,0 50.4628820960699 8.75113473342584 319.176 60.6375545851528 34.454834081983 283.411 67.8711790393013 30.8968980033395 309.271 0 0 cat,chimp,cow,horse,human,macaque,marmoset,orangutan, processed_transcript processed_transcript A549@0.402218,AG04450@0.804938,BJ@1.03675,GM12878@0.020428,H1HESC@0.426486,HELAS3@0.551793,HEPG2@1.68664,HMEC@1.01424,HSMM@2.36263,HUVEC@0.693373,K562@0.117681,MCF7@0.0113335,NHEK@0.990464,NHLF@1.1333,SKNSHRA@1.67942, 0 0 0 0 ENSG00000229589.1 ENST00000441531.1 chr3:38492518-38496311 2 2515 1276 intronic 0.87 0 0,0,1 0 0,0,0 0 181.276645768025 53.136 0 326.472570532915 73.292 0 267.80329153605 50.144 0 0 chimp,human,macaque,marmoset,orangutan, lincRNA processed_transcript A549@0.253472,AG04450@0.173753,BJ@0.187663,GM12878@0.0646315,H1HESC@0.863263,HELAS3@0.54551,HEPG2@0.937075,HMEC@0.029282,HSMM@0.133922,HUVEC@0.235442,K562@0.217823,MCF7@0.510042,NHEK@0.019098,NHLF@0.0409225,SKNSHRA@0.506285, 0 0 0 0 ENSG00000231243.1 ENST00000432250.1 chr3:38865393-38866793 3 405 991 intergenic 0.06 1 0,1,1 0 0,0,0 11.358024691358 8.01412714429869 10.81 41.1283950617284 21.5176589303734 14.94 43.1604938271605 21.087790110999 15.015 0 0 chimp,cow,horse,human,macaque,marmoset,orangutan,pig, antisense antisense A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000223797.1 ENST00000439293.1 chr3:40355293-40494677 3 536 138844 encompassing -0.61 0 0,1,0 1 0,0,0 0 6.30063236438017 0 0 5.90746449252399 5.699 0 11.5133963296938 5.791 0 0 chimp,horse,human,macaque,marmoset,orangutan,panda, lincRNA processed_transcript A549@0.617745,AG04450@0.686602,BJ@0.756023,GM12878@1.11379,H1HESC@0.63324,HELAS3@2.15993,HEPG2@0.992841,HMEC@0.412929,HSMM@0.548426,HUVEC@0.447454,K562@3.74667,MCF7@0.738477,NHEK@1.02515,NHLF@0.416959,SKNSHRA@0.911051, 0 0 0 0 ENSG00000223797.1 ENST00000425156.1 chr3:40432442-40494796 4 2032 60316 exonic 2.11 0 0,1,0 1 0,0,0 26.0378937007874 9.904718482658 0 11.3833661417323 8.97280986802838 5.699 15.6476377952756 12.612640095497 5.791 0 0 chimp,human,macaque,marmoset,orangutan, lincRNA processed_transcript A549@0.617745,AG04450@0.686602,BJ@0.756023,GM12878@1.11379,H1HESC@0.63324,HELAS3@2.15993,HEPG2@0.992841,HMEC@0.412929,HSMM@0.548426,HUVEC@0.447454,K562@3.74667,MCF7@0.738477,NHEK@1.02515,NHLF@0.416959,SKNSHRA@0.911051, 0 0 0 0 ENSG00000223797.1 ENST00000452768.1 chr3:40433341-40494671 5 719 60603 exonic 2.11 0 0,1,1 1 0,0,0 73.586926286509 9.85781231952214 0 32.1710709318498 8.93031698100754 5.699 44.2225312934631 12.5529099219511 5.791 0 0 chimp,dog,horse,human,macaque,marmoset,orangutan, lincRNA processed_transcript A549@0.617745,AG04450@0.686602,BJ@0.756023,GM12878@1.11379,H1HESC@0.63324,HELAS3@2.15993,HEPG2@0.992841,HMEC@0.412929,HSMM@0.548426,HUVEC@0.447454,K562@3.74667,MCF7@0.738477,NHEK@1.02515,NHLF@0.416959,SKNSHRA@0.911051, 0 0 0 0 ENSG00000223797.1 ENST00000420850.1 chr3:40487834-40494820 3 788 6194 intergenic 3.00 0 0,1,0 1 0,0,0 0 0 0 3.05456852791878 0.771714562479819 3.009 3.08502538071066 5.62592831772683 3.076 0 0 chimp,human,macaque,marmoset,orangutan, lincRNA processed_transcript A549@0.617745,AG04450@0.686602,BJ@0.756023,GM12878@1.11379,H1HESC@0.63324,HELAS3@2.15993,HEPG2@0.992841,HMEC@0.412929,HSMM@0.548426,HUVEC@0.447454,K562@3.74667,MCF7@0.738477,NHEK@1.02515,NHLF@0.416959,SKNSHRA@0.911051, 0 0 0 0 ENSG00000226302.1 ENST00000456335.1 chr3:40644616-40646918 2 715 1585 intergenic 1.35 0 0,0,0 0 0,0,0 0 0 17.36 0 0 48.852 0 0 45.759 0 0 chimp,human,macaque,orangutan, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000231873.1 ENST00000412811.1 chr3:40807698-40904117 3 497 95918 intergenic -6.75 0 0,0,0 0 0,0,0 0 16.0443086803311 0 0 13.9642507141517 6.696 0 14.5774515732188 12.015 0 0 chimp,human,macaque,marmoset,orangutan, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0.010616,HEPG2@0.033206,HMEC@0,HSMM@0.0397,HUVEC@0,K562@0,MCF7@0,NHEK@0.005281,NHLF@0.007718,SKNSHRA@0, 0 0 0 0 ENSG00000233096.1 ENST00000453828.1 chr3:41012032-41013069 2 668 367 intergenic 4.57 0 1,1,1 0 0,0,0 0 0 181.632 0 0 66.09 0 0 64.388 0 0 cat,chimp,horse,human,macaque,marmoset,orangutan,panda, lincRNA lincRNA A549@0.040056,AG04450@0,BJ@0,GM12878@0.123758,H1HESC@0,HELAS3@0,HEPG2@0.0203565,HMEC@0,HSMM@0,HUVEC@1.20614,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0.018816, 0 0 0 0 ENSG00000233919.1 ENST00000415774.1 chr3:41203778-41210038 4 606 5648 intergenic -0.02 0 0,1,0 0 0,0,0 51.7986798679868 8.28310906515581 0 39.8646864686469 9.8981940509915 3.346 46.3267326732673 10.898902266289 3.514 0 0 chimp,dog,elephant,horse,human,macaque,marmoset,orangutan,panda,pig,rabbit, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0.018321,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0.0148905, 0 0 0 0 ENSG00000204772.3 ENST00000377407.3 chr3:41915024-41916531 2 327 1178 intronic -6.77 0 0,0,1 0 0,0,0 0 0 0 0 4.11290322580645 4.05 0 4.2741935483871 9.516 0 0 NA sense_intronic sense_intronic A549@0.052346,AG04450@0.0049465,BJ@0,GM12878@0,H1HESC@0.0039035,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 2 44 0 0 ENSG00000232354.1 ENST00000452639.1 chr3:42572388-42574098 3 178 1528 exonic 0 0 0,0,0 0 0,0,0 148.033707865169 32.1498691099476 23.312 177.050561797753 63.8638743455497 23.76 189.303370786517 76.2624345549738 23.744 0 0 cat,chimp,elephant,human,macaque,marmoset,orangutan,pig, antisense antisense A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000230084.1 ENST00000438017.1 chr3:42643455-42695880 5 717 51700 exonic -1.63 0 0,1,1 0 0,0,0 55.3054393305439 67.1852998065764 111.196 68.6415620641562 67.5435589941973 267.732 75.21059972106 60.4994584139265 249.859 0 0 chimp,cow,human,macaque,marmoset,orangutan,panda, antisense antisense A549@0.009417,AG04450@0.039433,BJ@0.04655,GM12878@0.014136,H1HESC@0.0098675,HELAS3@0.08874,HEPG2@0.0414385,HMEC@0.049292,HSMM@0.0827295,HUVEC@0.029197,K562@0.0210195,MCF7@0.006659,NHEK@0.0112657,NHLF@0.0575125,SKNSHRA@0.0580465, 0 0 0 0 ENSG00000230084.1 ENST00000445452.1 chr3:42653782-42695880 2 471 41625 intronic 0 0 0,1,0 0 0,0,0 22.1146496815287 83.9597837837838 111.196 17.6135881104034 84.3506786786787 267.732 26.072186836518 75.5986786786787 249.859 0 0 chimp,cow,dog,elephant,horse,human,macaque,marmoset,orangutan,panda,pig,rat, antisense antisense A549@0.009417,AG04450@0.039433,BJ@0.04655,GM12878@0.014136,H1HESC@0.0098675,HELAS3@0.08874,HEPG2@0.0414385,HMEC@0.049292,HSMM@0.0827295,HUVEC@0.029197,K562@0.0210195,MCF7@0.006659,NHEK@0.0112657,NHLF@0.0575125,SKNSHRA@0.0580465, 0 0 0 0 ENSG00000230084.1 ENST00000434363.1 chr3:42674060-42695818 2 459 21297 exonic 0 0 1,1,1 0 0,0,0 102.305010893246 94.2802272620557 121.984 149.725490196078 86.473400009391 270.296 163.673202614379 76.201014227356 253.058 0 0 cat,chimp,cow,dog,elephant,human,macaque,mouse,orangutan,pig,rat, antisense antisense A549@0.009417,AG04450@0.039433,BJ@0.04655,GM12878@0.014136,H1HESC@0.0098675,HELAS3@0.08874,HEPG2@0.0414385,HMEC@0.049292,HSMM@0.0827295,HUVEC@0.029197,K562@0.0210195,MCF7@0.006659,NHEK@0.0112657,NHLF@0.0575125,SKNSHRA@0.0580465, 0 0 0 0 ENSG00000230970.1 ENST00000423165.1 chr3:42744145-42746120 2 555 1418 exonic 6.45 0 0,0,0 0 0,0,0 35.7567567567568 50.098730606488 101.934 44.4558558558559 46.3624823695346 130.052 41.6738738738739 35.8751763046544 102.587 0 0 cat,dog,horse,human,macaque,marmoset,panda,pig, antisense antisense A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000173811.6 ENST00000446950.1 chr3:42774067-42786650 4 550 12027 exonic 3.51 0 0,1,0 0 0,0,0 43.2272727272727 15.9882763781492 10.12 61.5745454545454 19.643552007982 31.427 62.2327272727273 20.6647543028187 31.823 0 0 chimp,dog,elephant,horse,human,macaque,marmoset,mouse,orangutan,panda,pig,rabbit, antisense antisense A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0.0012075,HELAS3@0.034614,HEPG2@0.056768,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000173811.6 ENST00000418161.1 chr3:42774069-42788260 3 2046 12141 exonic 2.50 0 0,1,0 0 0,0,0 48.9384164222874 15.8381517173215 10.12 63.3870967741936 19.4591055102545 31.427 73.669110459433 20.470719051149 31.823 0 0 cat,chimp,horse,human,macaque,marmoset,orangutan, antisense antisense A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0.0012075,HELAS3@0.034614,HEPG2@0.056768,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000225611.1 ENST00000432377.1 chr3:42812104-42815127 2 895 2126 exonic 11.70 1 0,1,1 0 0,0,0 0 0 0 19.5810055865922 0.865945437441204 0 19.4189944134078 0.872530573847601 0 0 0 chimp,human,orangutan, antisense antisense A549@0.00484,AG04450@0,BJ@0,GM12878@0.008187,H1HESC@0.0198785,HELAS3@0.301551,HEPG2@0.436529,HMEC@0,HSMM@0,HUVEC@0,K562@0.0089545,MCF7@0.020477,NHEK@0,NHLF@0,SKNSHRA@0, 9 6 0 0 ENSG00000235288.1 ENST00000449063.1 chr3:42846696-42893920 2 486 46736 intronic 3.18 0 0,0,0 0 0,0,0 0 0.577969873331051 0 0 2.93279270797672 20.401 0 3.66858524477919 20.845 0 0 chimp,horse,human,macaque,marmoset,orangutan,pig, antisense antisense A549@0.013822,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0.068428,HEPG2@0.154648,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0.0126395,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000206552.4 ENST00000447834.1 chr3:42975744-42978277 2 2132 399 exonic 3.24 0 0,0,1 0 0,0,0 0 0 0 0.863508442776735 0 0 0.870075046904315 0 0 0 0 chimp,human,macaque,marmoset,orangutan, lincRNA processed_transcript A549@0,AG04450@0.0088185,BJ@0.004536,GM12878@0,H1HESC@0.0167115,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0.0021265, 0 0 0 0 ENSG00000227245.1 ENST00000457115.1 chr3:43128971-43129560 2 507 80 intronic 2.89 0 0,0,0 0 0,0,0 0 0 0 0 0 0 0 0 0 0 0 chimp,horse,human,macaque,marmoset,orangutan, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0.103765,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0.03156,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000234617.1 ENST00000422681.1 chr3:43391136-43393454 3 747 1567 exonic -2.41 1 0,0,1 0 0,0,0 122.987951807229 451.782386726228 8.151 14.6479250334672 289.625398851308 0 26.8259705488621 346.491384811742 0 0 0 chimp,cow,horse,human,macaque,marmoset,orangutan,pig, antisense antisense A549@0.102685,AG04450@0.470218,BJ@0.109253,GM12878@0.221098,H1HESC@0.103431,HELAS3@0.0909975,HEPG2@0.112786,HMEC@0.016378,HSMM@0.0937895,HUVEC@0.134844,K562@0.00673,MCF7@0.776418,NHEK@0.116858,NHLF@0.043967,SKNSHRA@0.466255, 0 0 0 0 ENSG00000235886.1 ENST00000432423.1 chr3:43820453-43821474 3 408 609 intergenic -3.52 0 0,0,0 0 0,0,0 0 0 0 0 0 0 0 0 0 0 0 chimp,human,macaque,marmoset,orangutan, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000225873.1 ENST00000416124.1 chr3:44462619-44465499 2 730 2148 intergenic 0.21 0 0,0,1 0 0,0,0 0 0 0 43.4479452054795 0.128491620111732 8.902 58.6260273972603 0.132216014897579 9.013 0 0 cat,chimp,cow,dog,elephant,horse,human,macaque,marmoset,orangutan,panda,rabbit, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0.35925,H1HESC@0.012429,HELAS3@0.302223,HEPG2@1.39588,HMEC@0,HSMM@0,HUVEC@0.169776,K562@5.31848,MCF7@0.0631385,NHEK@0,NHLF@0,SKNSHRA@0.486437, 0 0 0 0 ENSG00000245865.1 ENST00000500374.1 chr3:44482424-44486946 2 1806 2714 exonic 6.59 0 0,0,1 0 0,0,0 0 6.32277081798084 0 4.36766334440753 3.93846720707443 0 4.6218161683278 4.09948415622697 0 0 0 chimp,dog,human,macaque,marmoset,orangutan, lincRNA lincRNA A549@0,AG04450@0.003275,BJ@0.005354,GM12878@0.003235,H1HESC@0.0016435,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0.0053335,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0.0029755, 0 0 0 0 ENSG00000236869.1 ENST00000457331.1 chr3:44598849-44727145 3 453 127839 exonic -2.44 0 0,1,0 1 0,0,0 135.812362030905 36.8219088071715 0 115.417218543046 28.051541391907 6.885 122.865342163355 37.4628556230885 11.818 0 0 cat,chimp,dog,elephant,guinea_pig,horse,human,macaque,marmoset,mouse,opossum,orangutan,panda,pig,platypus,rabbit,rat, processed_transcript processed_transcript A549@0.039681,AG04450@0.032591,BJ@0.025135,GM12878@0.0409535,H1HESC@0,HELAS3@0.026898,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0.0301555,K562@0,MCF7@0,NHEK@0.037132,NHLF@0,SKNSHRA@0.127608, 0 0 0 0 ENSG00000233509.2 ENST00000447691.2 chr3:44658620-44666289 2 621 7046 intronic 2.97 0 0,0,0 1 0,0,0 0 0 24.378 3.07890499194847 2.12290661368152 3.642 3.23349436392915 7.77107578768095 3.73 0 0 chimp,elephant,human,macaque,marmoset,mouse,orangutan, antisense antisense A549@0.012967,AG04450@0.0409995,BJ@0.0499105,GM12878@0.0922005,H1HESC@0.050019,HELAS3@0.104545,HEPG2@0,HMEC@0.029925,HSMM@0.030036,HUVEC@0.0116505,K562@0.228406,MCF7@0.03311,NHEK@0.0788397,NHLF@0.0573205,SKNSHRA@0.097896, 0 0 0 0 ENSG00000235845.1 ENST00000427258.1 chr3:44940670-44942417 2 567 1178 intronic -1.06 0 0,0,0 0 0,0,0 0 0 0 0 4.4634974533107 0 0 4.68760611205433 5.589 0 0 cat,chimp,dog,human,macaque,marmoset,orangutan, antisense antisense A549@0,AG04450@0.0017705,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0.002839,HSMM@0.0736405,HUVEC@0,K562@0,MCF7@0,NHEK@0.00652733,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000232455.2 ENST00000442534.2 chr3:45525466-45551037 4 571 24994 intronic 2.47 0 0,0,0 0 0,0,0 0 20.8011122669441 0 0 12.2379771145075 0 0 15.5787789069377 0 0 0 cat,chimp,horse,human,macaque,marmoset,orangutan, antisense antisense A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0.100086,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000230530.1 ENST00000427644.1 chr3:45720535-45730374 2 1534 8303 exonic 18.18 0 0,0,1 0 0,0,0 0 6.28074190051789 40.33 1.61929595827901 2.68396964952427 69.693 1.66623207301173 3.97868240395038 72.766 0 0 chimp,human,macaque,marmoset,orangutan, lincRNA processed_transcript A549@0.04821,AG04450@0.0195755,BJ@0.011089,GM12878@0.190284,H1HESC@0.392089,HELAS3@0.136335,HEPG2@0.0203195,HMEC@0.01866,HSMM@0.0418565,HUVEC@0.009498,K562@0.155509,MCF7@0.080102,NHEK@0.012767,NHLF@0.0101345,SKNSHRA@0.0253105, 0 0 0 0 ENSG00000230530.1 ENST00000429798.1 chr3:45720724-45730626 2 953 8947 exonic 6.18 0 1,1,1 0 0,0,0 20.6568730325289 6.73465966245669 24.572 30.6642182581322 3.83569911702247 29.244 30.5571878279119 5.03252486867106 32.541 0 0 chimp,human,macaque,marmoset,orangutan, lincRNA processed_transcript A549@0.04821,AG04450@0.0195755,BJ@0.011089,GM12878@0.190284,H1HESC@0.392089,HELAS3@0.136335,HEPG2@0.0203195,HMEC@0.01866,HSMM@0.0418565,HUVEC@0.009498,K562@0.155509,MCF7@0.080102,NHEK@0.012767,NHLF@0.0101345,SKNSHRA@0.0253105, 0 0 0 0 ENSG00000223552.1 ENST00000451485.1 chr3:46406446-46448550 4 652 41446 intronic 6.31 0 0,1,0 0 0,0,0 0 5.68197172224099 0 0 6.08464025478936 21.264 0 5.79529990831443 21.561 0 0 chimp,human, antisense antisense A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0.014479,HELAS3@0.07163,HEPG2@0.054056,HMEC@0,HSMM@0.0222945,HUVEC@0.204033,K562@0.099858,MCF7@0.003134,NHEK@0,NHLF@0.0029415,SKNSHRA@0.0164005, 0 0 0 0 ENSG00000163828.5 ENST00000444264.1 chr3:46653925-46668033 3 1823 12281 intergenic 11.27 0 0,0,0 0 0,0,1 20.3346132748217 0.301848383682111 0 29.5287986834888 0.959856689194691 0 32.6330224904004 2.87142740819151 0 0 0 chimp,horse,human,macaque,marmoset,orangutan, processed_transcript processed_transcript A549@0,AG04450@0,BJ@0.0026505,GM12878@0,H1HESC@0.0991145,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0.0027445,SKNSHRA@0, 0 0 0 0 ENSG00000227398.2 ENST00000429315.2 chr3:47205987-47285546 7 2346 77201 exonic 1.43 0 0,1,1 0 0,0,0 12.9914748508099 4.37631636895895 195.667 31.4944586530264 6.46665198637323 252.122 33.0230179028133 8.98090698307017 230.151 1 1 chimp,human,macaque,marmoset,orangutan, lincRNA processed_transcript A549@0.442386,AG04450@0.535932,BJ@0.557131,GM12878@0.254599,H1HESC@0.331477,HELAS3@0.228401,HEPG2@0.272023,HMEC@0.125292,HSMM@1.04128,HUVEC@0.409012,K562@0.314072,MCF7@0.225073,NHEK@0.352222,NHLF@0.335042,SKNSHRA@1.07639, 0 0 0 0 ENSG00000244380.1 ENST00000435578.1 chr3:48482189-48488060 3 546 5321 intronic 0 0 0,0,0 0 0,0,0 0 14.7491073106559 31.004 0 10.1629392971246 59.999 0 12.1135124976508 70.841 0 0 chimp,human,macaque,marmoset,orangutan, processed_transcript processed_transcript A549@0.166272,AG04450@0.093163,BJ@0.0439795,GM12878@0.0600785,H1HESC@0.212179,HELAS3@0.253053,HEPG2@0.274526,HMEC@0.035865,HSMM@0.122898,HUVEC@0.0424685,K562@0.054132,MCF7@0.202484,NHEK@0.031357,NHLF@0.086609,SKNSHRA@0.097591, 0 0 0 0 ENSG00000228350.1 ENST00000421275.1 chr3:48701209-48706607 3 193 5201 intronic 0 1 0,1,1 0 0,0,0 0 1.14208805998846 18.666 0 6.15823880023073 107.786 6.70984455958549 8.66890982503365 85.05 0 0 chimp,human,macaque,marmoset,orangutan, antisense antisense A549@0.0110745,AG04450@0.0120155,BJ@0.012561,GM12878@0.011959,H1HESC@0.033793,HELAS3@0.0373895,HEPG2@0.052098,HMEC@0.285141,HSMM@0,HUVEC@0,K562@0.025062,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0.0115755, 0 0 0 0 ENSG00000224424.6 ENST00000435419.1 chr3:48885005-48885926 2 841 78 exonic 11.29 0 0,1,1 0 0,0,0 14.8537455410226 0 22.555 99.179548156956 0 66.627 73.4732461355529 0 85.032 0 0 chimp,cow,dog,elephant,horse,human,macaque,marmoset,mouse,orangutan,rat, antisense antisense A549@0.65967,AG04450@0.237278,BJ@0.448358,GM12878@0.358137,H1HESC@0.510243,HELAS3@0.817878,HEPG2@0.384707,HMEC@0.494622,HSMM@0.374379,HUVEC@0.212567,K562@0.236461,MCF7@0.267475,NHEK@0.198231,NHLF@0.394487,SKNSHRA@0.65447, 0 0 0 0 ENSG00000224424.6 ENST00000431705.1 chr3:48885370-48886618 3 589 655 intergenic 2.98 0 0,1,0 1 0,0,0 9.26315789473684 37.8625954198473 35.394 26.5704584040747 34.0977099236641 149.074 7.11375212224109 18.5603053435115 145.884 0 0 chimp,cow,dog,elephant,horse,human,macaque,marmoset,orangutan,panda, antisense antisense A549@0.65967,AG04450@0.237278,BJ@0.448358,GM12878@0.358137,H1HESC@0.510243,HELAS3@0.817878,HEPG2@0.384707,HMEC@0.494622,HSMM@0.374379,HUVEC@0.212567,K562@0.236461,MCF7@0.267475,NHEK@0.198231,NHLF@0.394487,SKNSHRA@0.65447, 0 0 0 0 ENSG00000224424.6 ENST00000412171.2 chr3:48885370-48886887 2 938 577 intergenic 2.98 0 0,1,0 1 0,0,0 5.81663113006397 42.9809358752166 35.394 16.6844349680171 38.7071057192374 149.074 4.46695095948827 21.0693240901213 145.884 0 0 chimp,dog,elephant,horse,human,macaque,marmoset,mouse,orangutan,panda, antisense antisense A549@0.65967,AG04450@0.237278,BJ@0.448358,GM12878@0.358137,H1HESC@0.510243,HELAS3@0.817878,HEPG2@0.384707,HMEC@0.494622,HSMM@0.374379,HUVEC@0.212567,K562@0.236461,MCF7@0.267475,NHEK@0.198231,NHLF@0.394487,SKNSHRA@0.65447, 0 0 0 0 ENSG00000224424.6 ENST00000416209.2 chr3:48885390-48889414 2 3445 577 intergenic 2.98 1 1,1,1 1 0,0,0 0 27.8321167883212 35.394 2.59774436090226 33.2609489051095 149.074 4.34723171565277 13.4644160583942 145.884 0 0 chimp,human,macaque,marmoset,orangutan, antisense antisense A549@0.65967,AG04450@0.237278,BJ@0.448358,GM12878@0.358137,H1HESC@0.510243,HELAS3@0.817878,HEPG2@0.384707,HMEC@0.494622,HSMM@0.374379,HUVEC@0.212567,K562@0.236461,MCF7@0.267475,NHEK@0.198231,NHLF@0.394487,SKNSHRA@0.65447, 0 0 0 0 ENSG00000224424.6 ENST00000523129.2 chr3:48885390-48889414 3 3443 577 intergenic 2.98 1 1,1,1 1 0,0,0 1.58466453674121 42.9809358752166 35.394 6.30874237583503 38.7071057192374 149.074 4.44960790008713 21.0693240901213 145.884 0 1 chimp,human,macaque,orangutan, antisense antisense A549@0.65967,AG04450@0.237278,BJ@0.448358,GM12878@0.358137,H1HESC@0.510243,HELAS3@0.817878,HEPG2@0.384707,HMEC@0.494622,HSMM@0.374379,HUVEC@0.212567,K562@0.236461,MCF7@0.267475,NHEK@0.198231,NHLF@0.394487,SKNSHRA@0.65447, 0 0 0 0 ENSG00000235236.1 ENST00000415982.1 chr3:49017351-49021418 2 518 3547 exonic 2.19 0 0,1,1 0 0,0,0 0 123.051310967014 0 0 117.88046236256 33.32 3.28378378378378 126.098674936566 29.813 0 0 chimp,cow,dog,elephant,horse,human,macaque,marmoset,orangutan,pig, antisense antisense A549@0.0159355,AG04450@0.004529,BJ@0.0093075,GM12878@0.018516,H1HESC@0.259452,HELAS3@0.380403,HEPG2@0.104913,HMEC@0,HSMM@0.0082145,HUVEC@0,K562@0,MCF7@0.093252,NHEK@0,NHLF@0,SKNSHRA@0.0043705, 0 0 0 0 ENSG00000235236.1 ENST00000429681.1 chr3:49017365-49021299 2 553 3379 exonic 6.91 0 0,0,1 0 0,0,0 0 129.169280852323 0 3.07052441229656 123.238828055638 28.535 6.21157323688969 131.85498668245 24.998 0 0 cat,chimp,dog,elephant,human,macaque,marmoset,orangutan,panda,pig, antisense antisense A549@0.0159355,AG04450@0.004529,BJ@0.0093075,GM12878@0.018516,H1HESC@0.259452,HELAS3@0.380403,HEPG2@0.104913,HMEC@0,HSMM@0.0082145,HUVEC@0,K562@0,MCF7@0.093252,NHEK@0,NHLF@0,SKNSHRA@0.0043705, 0 0 0 0 ENSG00000223343.1 ENST00000452042.1 chr3:49022482-49027421 2 780 4157 exonic 0.33 0 0,0,1 0 0,0,0 20.0192307692308 13.021890786625 136.902 7.71282051282051 9.75679576617753 171.569 11.9307692307692 11.7519846042819 148.668 0 0 cat,chimp,cow,horse,human,orangutan,panda,rabbit, antisense antisense A549@0.419393,AG04450@0.18272,BJ@0.145149,GM12878@0.269865,H1HESC@1.59119,HELAS3@2.31391,HEPG2@0.57206,HMEC@0.036653,HSMM@0.351921,HUVEC@0.223811,K562@0.050198,MCF7@1.24259,NHEK@0.00995833,NHLF@0.171332,SKNSHRA@0.072296, 0 0 0 0 ENSG00000236980.3 ENST00000443990.1 chr3:49215069-49227457 3 648 11736 intergenic -4.94 1 0,1,0 0 0,0,1 203.864197530864 3.72085889570552 14.064 222.268518518519 5.77283571915474 64.285 181.723765432099 5.24071233810498 70.3 0 0 cat,cow,dog,elephant,guinea_pig,horse,human,macaque,marmoset,mouse,orangutan,panda,pig,rabbit,rat, antisense antisense A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0.006412,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000236980.3 ENST00000545770.1 chr3:49215069-49229291 4 698 13518 intergenic 2.47 1 0,0,0 0 0,0,1 227.873925501433 4.13641071164373 45.464 328.144699140401 6.0352862849534 38.435 288.512893982808 6.03469448143216 35.644 0 0 cat,cow,dog,elephant,guinea_pig,horse,human,macaque,marmoset,mouse,orangutan,panda,pig,rabbit,rat, antisense antisense A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0.006412,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000236980.3 ENST00000432035.1 chr3:49215268-49227501 3 316 11913 intergenic -3.54 0 0,0,1 0 0,0,1 343.905063291139 3.98589775875094 1.172 359.731012658228 6.03727020901536 39.689 318.731012658228 5.41391756904222 45.924 0 0 cat,cow,dog,elephant,guinea_pig,horse,human,macaque,marmoset,mouse,orangutan,panda,pig,rabbit,rat, antisense antisense A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0.006412,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000235908.1 ENST00000428083.1 chr3:49402578-49404439 2 515 1344 intronic -2.95 0 0,0,1 0 0,0,0 0 0 0 0 0 0 0 1.7485119047619 0 0 0 chimp,elephant,horse,human,marmoset,orangutan, sense_intronic sense_intronic A549@0.540231,AG04450@0.273487,BJ@0.271904,GM12878@0.876416,H1HESC@0.545581,HELAS3@0.681843,HEPG2@0.500816,HMEC@0.040708,HSMM@0.187505,HUVEC@1.57292,K562@0.8763,MCF7@0.926882,NHEK@0.333502,NHLF@0.054969,SKNSHRA@0.339859, 0 0 0 0 ENSG00000235261.1 ENST00000424915.1 chr3:49460379-49461864 2 709 774 exonic 4.10 0 0,1,0 0 0,0,0 0 0 11.934 5.07334273624824 0 80.826 14.8265162200282 0 108.041 0 0 cat,chimp,cow,dog,horse,human,macaque,marmoset,mouse,orangutan,panda,rabbit, antisense antisense A549@0.646697,AG04450@0.268837,BJ@0.307244,GM12878@0.551692,H1HESC@0.350501,HELAS3@0.655845,HEPG2@0.731729,HMEC@0.005759,HSMM@0.30737,HUVEC@0.630593,K562@0.222739,MCF7@1.8862,NHEK@0.0648223,NHLF@0.008172,SKNSHRA@0.793089, 0 0 0 0 ENSG00000226913.1 ENST00000421598.1 chr3:49586739-49591799 3 2600 2456 intergenic 2.55 0 1,1,1 0 0,0,0 4.42115384615385 3.74592833876221 326.568 19.1688461538462 28.542345276873 241.062 20.3938461538462 24.7622149837134 235.981 0 0 chimp,human,macaque,marmoset,orangutan, lincRNA processed_transcript A549@0.039826,AG04450@0.0158015,BJ@0.0083755,GM12878@0.014128,H1HESC@0.099085,HELAS3@0.0203855,HEPG2@0.017662,HMEC@0.001573,HSMM@0.00675,HUVEC@0.000934,K562@0.0462455,MCF7@0.036757,NHEK@0.00654733,NHLF@0.0059965,SKNSHRA@0.087182, 0 0 0 0 ENSG00000226913.1 ENST00000433882.1 chr3:49588728-49591773 3 563 2478 intergenic -3.25 0 0,1,1 0 0,0,0 0 3.71267150928168 313.854 0 28.2889426957224 242.796 0 24.5423728813559 237.685 0 0 cat,chimp,human,macaque,marmoset,orangutan, lincRNA processed_transcript A549@0.039826,AG04450@0.0158015,BJ@0.0083755,GM12878@0.014128,H1HESC@0.099085,HELAS3@0.0203855,HEPG2@0.017662,HMEC@0.001573,HSMM@0.00675,HUVEC@0.000934,K562@0.0462455,MCF7@0.036757,NHEK@0.00654733,NHLF@0.0059965,SKNSHRA@0.087182, 0 0 0 0 ENSG00000235120.1 ENST00000442384.1 chr3:49677916-49679202 2 459 825 intronic -4.06 0 0,1,0 0 0,0,0 0 0 190.599 0 0 253.804 0 0 214.555 0 0 chimp,human,macaque,marmoset,orangutan, antisense antisense A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0.00892,NHEK@0,NHLF@0,SKNSHRA@0, 2 44 0 0 ENSG00000230698.1 ENST00000435478.1 chr3:49936735-49941190 2 542 3911 exonic 11.83 0 0,0,1 0 0,0,0 0 34.6842239836359 139.484 18.5350553505535 54.6231142930197 170.763 33.260147601476 66.7778061876758 162.827 0 0 cat,chimp,cow,dog,elephant,guinea_pig,horse,human,macaque,marmoset,orangutan,panda,rabbit,rat, antisense antisense A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0.042743,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000228008.1 ENST00000424174.1 chr3:49941278-49943670 2 420 1970 intergenic -1.88 0 0,0,0 0 0,0,0 0 0 80.543 23.7666666666667 0 132.828 25.2690476190476 1.11015228426396 147.064 0 0 cat,chimp,cow,guinea_pig,horse,human,macaque,marmoset,orangutan,panda,rabbit, antisense antisense A549@0.179266,AG04450@0.028717,BJ@0.0122395,GM12878@0.178995,H1HESC@0.125941,HELAS3@0.267512,HEPG2@0.159989,HMEC@0.027298,HSMM@0,HUVEC@0.0174045,K562@0.1482,MCF7@0.0443625,NHEK@0.003247,NHLF@0.003216,SKNSHRA@0, 0 0 0 0 ENSG00000228008.1 ENST00000412015.1 chr3:49941315-49943673 2 363 1993 intergenic 4.53 0 0,1,0 0 0,0,0 0 0 80.543 24.8650137741047 0 129.399 29.236914600551 1.09734069242348 139.552 0 0 cat,chimp,cow,dog,guinea_pig,horse,human,marmoset,orangutan,panda,rabbit, antisense antisense A549@0.179266,AG04450@0.028717,BJ@0.0122395,GM12878@0.178995,H1HESC@0.125941,HELAS3@0.267512,HEPG2@0.159989,HMEC@0.027298,HSMM@0,HUVEC@0.0174045,K562@0.1482,MCF7@0.0443625,NHEK@0.003247,NHLF@0.003216,SKNSHRA@0, 0 0 0 0 ENSG00000228008.1 ENST00000419183.1 chr3:49941420-49954370 2 598 12350 intronic 4.01 0 0,1,1 0 0,0,0 0 68.8384615384615 77.51 17.0367892976589 75.48 109.852 28.8377926421405 72.561052631579 119.208 0 0 cat,chimp,cow,dog,elephant,horse,human,macaque,marmoset,orangutan,panda,rabbit, antisense antisense A549@0.179266,AG04450@0.028717,BJ@0.0122395,GM12878@0.178995,H1HESC@0.125941,HELAS3@0.267512,HEPG2@0.159989,HMEC@0.027298,HSMM@0,HUVEC@0.0174045,K562@0.1482,MCF7@0.0443625,NHEK@0.003247,NHLF@0.003216,SKNSHRA@0, 0 0 0 0 ENSG00000235016.1 ENST00000437204.1 chr3:50153455-50193518 4 2751 37306 exonic 4.95 0 0,0,1 0 0,0,0 30.4703744093057 28.4466305688093 82.879 73.3416939294802 45.1748780357047 72.44 65.3053435114504 42.8222001822763 73.071 0 0 chimp,human,macaque, antisense antisense A549@0.007337,AG04450@0.026594,BJ@0.002068,GM12878@0.0010615,H1HESC@0.0420305,HELAS3@0.023579,HEPG2@0.0049505,HMEC@0.001486,HSMM@0,HUVEC@0.172119,K562@0.005099,MCF7@0.28832,NHEK@0.00143567,NHLF@0.000708,SKNSHRA@0.0195375, 0 0 0 0 ENSG00000235016.1 ENST00000425674.1 chr3:50155598-50193453 2 563 37290 exonic 2.24 0 0,1,0 0 0,0,0 105.83836589698 27.2283454009118 74.269 167.50621669627 43.3377312952534 70.145 146.520426287744 41.3136765888978 70.999 0 0 cat,chimp,cow,dog,elephant,horse,human,macaque,marmoset,mouse,panda,rabbit,rat, antisense antisense A549@0.007337,AG04450@0.026594,BJ@0.002068,GM12878@0.0010615,H1HESC@0.0420305,HELAS3@0.023579,HEPG2@0.0049505,HMEC@0.001486,HSMM@0,HUVEC@0.172119,K562@0.005099,MCF7@0.28832,NHEK@0.00143567,NHLF@0.000708,SKNSHRA@0.0195375, 0 0 0 0 ENSG00000188338.8 ENST00000427428.2 chr3:50242679-50252189 5 578 8924 intergenic 0.69 0 0,1,0 1 0,0,1 128.347750865052 56.2220977140296 51.975 192.415224913495 64.3980277902286 67.4 240.153979238754 66.4056476916181 66.629 0 0 cat,chimp,cow,dog,elephant,guinea_pig,horse,human,macaque,marmoset,orangutan,panda,pig,rabbit,rat, lincRNA lincRNA A549@0.0284535,AG04450@0.0191625,BJ@0.0795715,GM12878@0.009885,H1HESC@2.3707,HELAS3@21.8792,HEPG2@66.1009,HMEC@0.02008,HSMM@0.533566,HUVEC@0.266444,K562@0.372768,MCF7@0.360569,NHEK@0.004679,NHLF@0.005768,SKNSHRA@1.47335, 0 0 0 0 ENSG00000188338.8 ENST00000420502.1 chr3:50242679-50258411 16 2454 13248 intergenic 179.35 1 1,1,1 1 0,0,1 184.577017114914 41.43538647343 51.975 273.088019559902 49.8325030193237 67.4 284.651589242054 51.8226902173913 66.629 0 0 chimp,cow,dog,elephant,guinea_pig,horse,human,macaque,marmoset,mouse,opossum,orangutan,panda,pig,rabbit,rat, lincRNA lincRNA A549@0.0284535,AG04450@0.0191625,BJ@0.0795715,GM12878@0.009885,H1HESC@2.3707,HELAS3@21.8792,HEPG2@66.1009,HMEC@0.02008,HSMM@0.533566,HUVEC@0.266444,K562@0.372768,MCF7@0.360569,NHEK@0.004679,NHLF@0.005768,SKNSHRA@1.47335, 0 0 0 0 ENSG00000188338.8 ENST00000541861.1 chr3:50242692-50258400 16 2431 13247 intergenic 189.52 1 1,1,1 1 0,0,1 183.010283833813 41.4385143806145 53.529 274.823118058412 49.8121838906922 68.865 286.718222953517 51.801766437684 68.032 0 0 chimp,cow,dog,elephant,guinea_pig,horse,human,macaque,marmoset,mouse,opossum,orangutan,panda,pig,rabbit,rat, lincRNA retained_intron A549@0.0284535,AG04450@0.0191625,BJ@0.0795715,GM12878@0.009885,H1HESC@2.3707,HELAS3@21.8792,HEPG2@66.1009,HMEC@0.02008,HSMM@0.533566,HUVEC@0.266444,K562@0.372768,MCF7@0.360569,NHEK@0.004679,NHLF@0.005768,SKNSHRA@1.47335, 0 0 0 0 ENSG00000188338.8 ENST00000414604.1 chr3:50242701-50255427 10 981 11727 intergenic 19.92 0 0,1,0 1 0,0,1 191.150866462793 47.2101134134902 56.112 323.102956167176 55.8886330689861 68.865 381.399592252803 58.5110428924704 68.032 0 0 cat,chimp,cow,dog,elephant,guinea_pig,horse,human,macaque,marmoset,mouse,opossum,orangutan,panda,pig,platypus,rabbit,rat, lincRNA lincRNA A549@0.0284535,AG04450@0.0191625,BJ@0.0795715,GM12878@0.009885,H1HESC@2.3707,HELAS3@21.8792,HEPG2@66.1009,HMEC@0.02008,HSMM@0.533566,HUVEC@0.266444,K562@0.372768,MCF7@0.360569,NHEK@0.004679,NHLF@0.005768,SKNSHRA@1.47335, 0 0 0 0 ENSG00000188338.8 ENST00000545531.1 chr3:50242701-50255961 11 1242 11998 intergenic 93.60 0 1,1,1 1 0,0,1 177.18115942029 46.5001666944491 56.112 306.273752012882 54.9718286381064 68.865 336.755233494364 57.5699283213869 68.032 0 0 cat,chimp,cow,dog,elephant,guinea_pig,horse,human,macaque,marmoset,mouse,opossum,orangutan,panda,pig,platypus,rabbit,rat, lincRNA retained_intron A549@0.0284535,AG04450@0.0191625,BJ@0.0795715,GM12878@0.009885,H1HESC@2.3707,HELAS3@21.8792,HEPG2@66.1009,HMEC@0.02008,HSMM@0.533566,HUVEC@0.266444,K562@0.372768,MCF7@0.360569,NHEK@0.004679,NHLF@0.005768,SKNSHRA@1.47335, 0 0 0 0 ENSG00000188338.8 ENST00000541624.1 chr3:50242706-50255906 11 1070 12110 intergenic 111.06 0 1,1,1 1 0,0,1 198.8 46.5006606110652 57.547 314.800934579439 57.5520231213873 68.865 350.598130841122 60.1206440957886 68.032 0 0 cat,chimp,cow,dog,elephant,guinea_pig,horse,human,macaque,marmoset,mouse,opossum,orangutan,panda,pig,platypus,rabbit,rat, lincRNA retained_intron A549@0.0284535,AG04450@0.0191625,BJ@0.0795715,GM12878@0.009885,H1HESC@2.3707,HELAS3@21.8792,HEPG2@66.1009,HMEC@0.02008,HSMM@0.533566,HUVEC@0.266444,K562@0.372768,MCF7@0.360569,NHEK@0.004679,NHLF@0.005768,SKNSHRA@1.47335, 0 0 0 0 ENSG00000188338.8 ENST00000456338.1 chr3:50242712-50252346 4 561 9067 intergenic 20.59 0 1,1,1 1 0,0,1 126.388591800356 55.3353920811735 58.982 218.155080213904 63.3823756479541 68.865 270.235294117647 65.3583324142495 68.032 0 0 cat,chimp,cow,dog,elephant,guinea_pig,horse,human,macaque,marmoset,mouse,opossum,orangutan,panda,pig,platypus,rabbit,rat, lincRNA retained_intron A549@0.0284535,AG04450@0.0191625,BJ@0.0795715,GM12878@0.009885,H1HESC@2.3707,HELAS3@21.8792,HEPG2@66.1009,HMEC@0.02008,HSMM@0.533566,HUVEC@0.266444,K562@0.372768,MCF7@0.360569,NHEK@0.004679,NHLF@0.005768,SKNSHRA@1.47335, 0 0 0 0 ENSG00000188338.8 ENST00000445096.1 chr3:50242719-50256104 10 870 12497 intergenic -4.17 0 0,1,0 1 0,0,1 206.696551724138 48.1709210210451 58.982 390.472413793103 61.3332799871969 68.865 411.975862068966 63.734496279107 68.032 0 0 cat,chimp,cow,dog,elephant,guinea_pig,horse,human,macaque,marmoset,mouse,opossum,orangutan,panda,pig,platypus,rabbit,rat, lincRNA lincRNA A549@0.0284535,AG04450@0.0191625,BJ@0.0795715,GM12878@0.009885,H1HESC@2.3707,HELAS3@21.8792,HEPG2@66.1009,HMEC@0.02008,HSMM@0.533566,HUVEC@0.266444,K562@0.372768,MCF7@0.360569,NHEK@0.004679,NHLF@0.005768,SKNSHRA@1.47335, 0 0 0 0 ENSG00000188338.8 ENST00000445325.1 chr3:50245116-50252201 4 631 6448 intergenic 0.69 0 0,1,0 0 0,0,1 280.80824088748 50.4820099255583 11.233 311.56735340729 68.2481389578164 5.809 352.797147385103 71.5893300248139 5.899 0 0 cat,chimp,cow,dog,elephant,guinea_pig,horse,human,macaque,marmoset,mouse,orangutan,panda,pig,rabbit,rat, lincRNA lincRNA A549@0.0284535,AG04450@0.0191625,BJ@0.0795715,GM12878@0.009885,H1HESC@2.3707,HELAS3@21.8792,HEPG2@66.1009,HMEC@0.02008,HSMM@0.533566,HUVEC@0.266444,K562@0.372768,MCF7@0.360569,NHEK@0.004679,NHLF@0.005768,SKNSHRA@1.47335, 0 0 0 0 ENSG00000188338.8 ENST00000439524.1 chr3:50252699-50254725 4 420 1600 intergenic -2.13 0 0,0,0 0 0,0,1 197.969047619048 3.569375 55.965 296.257142857143 14.645625 105.723 358.047619047619 17.311875 112.808 0 0 cat,chimp,cow,dog,elephant,guinea_pig,horse,human,macaque,marmoset,mouse,opossum,orangutan,panda,pig,platypus,rabbit,rat, lincRNA retained_intron A549@0.0284535,AG04450@0.0191625,BJ@0.0795715,GM12878@0.009885,H1HESC@2.3707,HELAS3@21.8792,HEPG2@66.1009,HMEC@0.02008,HSMM@0.533566,HUVEC@0.266444,K562@0.372768,MCF7@0.360569,NHEK@0.004679,NHLF@0.005768,SKNSHRA@1.47335, 0 0 0 0 ENSG00000188338.8 ENST00000417851.1 chr3:50255168-50256100 3 435 493 intergenic -11.43 0 0,0,0 0 0,0,1 164.910344827586 8.67342799188641 36.104 365.172413793103 58.3367139959432 90.13 336.441379310345 55.8620689655172 105.536 0 0 cat,chimp,cow,dog,elephant,guinea_pig,horse,human,macaque,marmoset,mouse,opossum,orangutan,panda,pig,rabbit,rat, lincRNA retained_intron A549@0.0284535,AG04450@0.0191625,BJ@0.0795715,GM12878@0.009885,H1HESC@2.3707,HELAS3@21.8792,HEPG2@66.1009,HMEC@0.02008,HSMM@0.533566,HUVEC@0.266444,K562@0.372768,MCF7@0.360569,NHEK@0.004679,NHLF@0.005768,SKNSHRA@1.47335, 0 0 0 0 ENSG00000188338.8 ENST00000417121.1 chr3:50255346-50256112 2 492 272 intergenic 29.94 0 0,0,0 0 0,0,1 148.048780487805 15.7205882352941 37.688 300.038617886179 15.2426470588235 106.075 323.75 17.8455882352941 120.696 0 0 cat,chimp,cow,dog,elephant,guinea_pig,horse,human,macaque,marmoset,mouse,opossum,orangutan,panda,pig,rabbit,rat, lincRNA retained_intron A549@0.0284535,AG04450@0.0191625,BJ@0.0795715,GM12878@0.009885,H1HESC@2.3707,HELAS3@21.8792,HEPG2@66.1009,HMEC@0.02008,HSMM@0.533566,HUVEC@0.266444,K562@0.372768,MCF7@0.360569,NHEK@0.004679,NHLF@0.005768,SKNSHRA@1.47335, 0 0 0 0 ENSG00000230454.1 ENST00000439898.1 chr3:50297735-50300790 2 2623 430 intergenic -0.80 1 0,1,1 1 0,0,0 21.9542508577964 0 55.821 54.0503240564239 0 60.299 58.1608844834159 0 60.233 0 0 chimp,human,macaque,marmoset,orangutan, lincRNA processed_transcript A549@0.464016,AG04450@0.284663,BJ@0.229691,GM12878@0.221656,H1HESC@0.359287,HELAS3@0.669574,HEPG2@0.945563,HMEC@0.019147,HSMM@0.16045,HUVEC@0.244817,K562@0.35036,MCF7@0.89498,NHEK@0.072214,NHLF@0.239588,SKNSHRA@1.25191, 0 0 0 0 ENSG00000230454.1 ENST00000453717.1 chr3:50297846-50298839 2 423 568 intergenic -1.14 1 0,1,1 0 0,0,0 0 101.383802816901 12.648 29.2009456264775 172.029929577465 46.829 49.2434988179669 176.135563380282 47.811 0 0 cat,chimp,cow,dog,elephant,guinea_pig,horse,human,macaque,marmoset,mouse,orangutan,panda,pig,rat, lincRNA processed_transcript A549@0.464016,AG04450@0.284663,BJ@0.229691,GM12878@0.221656,H1HESC@0.359287,HELAS3@0.669574,HEPG2@0.945563,HMEC@0.019147,HSMM@0.16045,HUVEC@0.244817,K562@0.35036,MCF7@0.89498,NHEK@0.072214,NHLF@0.239588,SKNSHRA@1.25191, 0 0 0 0 ENSG00000230454.1 ENST00000426302.1 chr3:50298665-50300744 2 428 1649 intergenic -0.80 1 0,1,1 0 0,0,0 0 0 60.314 14.9696261682243 9.07216494845361 128.771 25.6542056074766 8.34141904184354 136.076 0 0 cat,chimp,dog,elephant,guinea_pig,horse,human,macaque,marmoset,orangutan,panda,rat, lincRNA processed_transcript A549@0.464016,AG04450@0.284663,BJ@0.229691,GM12878@0.221656,H1HESC@0.359287,HELAS3@0.669574,HEPG2@0.945563,HMEC@0.019147,HSMM@0.16045,HUVEC@0.244817,K562@0.35036,MCF7@0.89498,NHEK@0.072214,NHLF@0.239588,SKNSHRA@1.25191, 0 0 0 0 ENSG00000232352.1 ENST00000421735.1 chr3:50304073-50304803 2 336 392 intergenic 0.46 0 0,0,1 0 0,0,0 5.90476190476191 31.6326530612245 17.416 0 4.13265306122449 55.814 0 8.4515306122449 58.837 0 0 cow,elephant,human,macaque,marmoset,orangutan, antisense antisense A549@0,AG04450@0.03931,BJ@0.166537,GM12878@0,H1HESC@0.026377,HELAS3@1.59836,HEPG2@0.351953,HMEC@0,HSMM@0,HUVEC@0.031021,K562@0,MCF7@0.12242,NHEK@0,NHLF@0.875551,SKNSHRA@0.125761, 0 0 0 0 ENSG00000235058.1 ENST00000440013.1 chr3:50378537-50383128 2 248 4341 exonic 0 0 1,1,1 0 0,0,0 73.2903225806452 93.9979267449896 92.144 112.431451612903 138.248329877908 128.034 103.572580645161 472.104814558857 152.647 0 0 cat,chimp,cow,horse,human,macaque,marmoset,orangutan,panda, antisense antisense A549@0,AG04450@0,BJ@0.028623,GM12878@0.0291375,H1HESC@0.011641,HELAS3@0.151014,HEPG2@0.032733,HMEC@0,HSMM@0,HUVEC@0,K562@0.0185755,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000235455.1 ENST00000440723.1 chr3:51907612-51909783 3 1997 170 exonic 2.72 0 0,1,0 0 0,0,0 13.3289934902354 0 0 40.8893340010015 94.0941176470588 0 41.027541311968 110.441176470588 0 0 0 chimp,cow,dog,guinea_pig,horse,human,macaque,orangutan,panda,rabbit, antisense antisense A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0.0046045,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000243224.1 ENST00000483834.1 chr3:52273274-52275113 2 1099 738 intergenic -1.25 1 1,1,1 1 0,0,0 0 0 89.538 0 0 106.728 0 0 93.444 0 0 cat,chimp,cow,dog,elephant,horse,human,macaque,marmoset,orangutan,panda, lincRNA processed_transcript A549@0.193606,AG04450@0.185291,BJ@0.176615,GM12878@0.969223,H1HESC@0.562175,HELAS3@0.61359,HEPG2@0.671668,HMEC@0.141322,HSMM@0.229945,HUVEC@0.152747,K562@0.639105,MCF7@0.296925,NHEK@0.159446,NHLF@0.0728985,SKNSHRA@0.558827, 0 0 0 0 ENSG00000243224.1 ENST00000464958.1 chr3:52273316-52275113 2 1054 741 intergenic -1.55 1 1,1,1 1 0,0,0 0 0 89.538 0 0 102.144 0 0 88.932 0 0 cat,chimp,cow,dog,elephant,horse,human,macaque,marmoset,orangutan,panda, lincRNA processed_transcript A549@0.193606,AG04450@0.185291,BJ@0.176615,GM12878@0.969223,H1HESC@0.562175,HELAS3@0.61359,HEPG2@0.671668,HMEC@0.141322,HSMM@0.229945,HUVEC@0.152747,K562@0.639105,MCF7@0.296925,NHEK@0.159446,NHLF@0.0728985,SKNSHRA@0.558827, 0 0 0 0 ENSG00000242797.1 ENST00000481576.1 chr3:52322596-52323292 1 696 0 intronic -1.22 1 0,0,0 0 0,0,0 0 0 44.165 3.29741379310345 0 50.124 3.42672413793103 0 42.211 0 0 cat,chimp,cow,horse,human,macaque,marmoset,orangutan,panda, antisense TEC A549@0,AG04450@0,BJ@0,GM12878@0.089507,H1HESC@0.424906,HELAS3@0.017966,HEPG2@0.042808,HMEC@0,HSMM@0,HUVEC@0.0037815,K562@0.43181,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@4.22909, 0 0 0 0 ENSG00000242797.1 ENST00000493616.1 chr3:52322599-52333040 3 442 9995 exonic -1.70 1 0,1,0 1 0,0,0 244.809954751131 68.5624812406203 24.321 301.954751131222 63.7335667833917 19.21 281.31221719457 60.4728364182091 28.007 0 0 cat,chimp,cow,dog,elephant,guinea_pig,horse,human,macaque,marmoset,mouse,orangutan,panda,pig,rabbit, antisense antisense A549@0,AG04450@0,BJ@0,GM12878@0.089507,H1HESC@0.424906,HELAS3@0.017966,HEPG2@0.042808,HMEC@0,HSMM@0,HUVEC@0.0037815,K562@0.43181,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@4.22909, 0 0 0 0 ENSG00000242797.1 ENST00000467187.1 chr3:52326746-52333083 2 641 5694 exonic -0.12 0 0,1,0 1 0,0,0 379.97503900156 14.5381102915349 13.498 349.079563182527 17.5235335440815 15.448 332.648985959438 16.8565156304882 24.365 0 0 cat,chimp,cow,dog,elephant,guinea_pig,horse,human,macaque,marmoset,mouse,opossum,orangutan,panda,pig,platypus,rabbit, antisense retained_intron A549@0,AG04450@0,BJ@0,GM12878@0.089507,H1HESC@0.424906,HELAS3@0.017966,HEPG2@0.042808,HMEC@0,HSMM@0,HUVEC@0.0037815,K562@0.43181,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@4.22909, 0 0 0 0 ENSG00000242797.1 ENST00000472761.1 chr3:52330673-52332930 2 107 2148 intergenic 0 0 0,0,0 1 0,0,0 257.831775700935 6.75977653631285 77.561 334.009345794393 11.3337988826816 88.18 323.355140186916 11.395251396648 94.777 0 0 chimp,cow,dog,elephant,human,macaque,marmoset,orangutan,panda, antisense antisense A549@0,AG04450@0,BJ@0,GM12878@0.089507,H1HESC@0.424906,HELAS3@0.017966,HEPG2@0.042808,HMEC@0,HSMM@0,HUVEC@0.0037815,K562@0.43181,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@4.22909, 0 0 0 0 ENSG00000239799.1 ENST00000478366.1 chr3:52857951-52859330 3 392 983 exonic 7.73 0 0,1,0 0 0,0,0 0 48.2075279755849 15.34 81.2270408163265 66.7192268565615 88.187 108.948979591837 82.9359104781282 106.653 0 0 cat,chimp,dog,elephant,guinea_pig,horse,human,macaque,marmoset,mouse,orangutan,panda,pig,rabbit, antisense antisense A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0.0202815,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000162290.10 ENST00000480258.1 chr3:53317448-53381637 10 5988 58183 intergenic 22.37 1 0,1,1 1 0,1,1 320.904141616567 9.97949572899301 0 294.909819639279 10.6886375745493 5.333 260.221943887775 11.1793307323445 6.914 0 0 chimp,cow,dog,elephant,human,macaque,orangutan,panda, lincRNA lincRNA A549@8.84552,AG04450@9.01192,BJ@9.50372,GM12878@10.1299,H1HESC@9.70531,HELAS3@17.1692,HEPG2@14.7112,HMEC@4.93196,HSMM@5.89157,HUVEC@14.7951,K562@10.098,MCF7@5.46176,NHEK@7.00768,NHLF@7.61499,SKNSHRA@10.9768, 0 0 0 0 ENSG00000162290.10 ENST00000494659.2 chr3:53321388-53381552 9 1850 58298 intergenic 23.28 0 1,1,1 1 0,1,1 423.823243243243 10.6699543723627 25.37 454.982162162162 11.4588493601839 22.69 418.480540540541 11.9516278431507 583.157 0 0 cat,chimp,cow,dog,elephant,guinea_pig,horse,human,macaque,marmoset,mouse,orangutan,panda,rabbit,rat, lincRNA lincRNA A549@8.84552,AG04450@9.01192,BJ@9.50372,GM12878@10.1299,H1HESC@9.70531,HELAS3@17.1692,HEPG2@14.7112,HMEC@4.93196,HSMM@5.89157,HUVEC@14.7951,K562@10.098,MCF7@5.46176,NHEK@7.00768,NHLF@7.61499,SKNSHRA@10.9768, 0 0 0 0 ENSG00000162290.10 ENST00000294241.6 chr3:53321388-53381570 11 1974 58188 intergenic 20.41 0 1,1,1 1 0,1,1 421.565856129686 9.97863820719048 17.63 448.74062816616 10.7898020210353 17.633 414.301925025329 11.2791297174675 17.757 0 0 chimp,cow,dog,elephant,guinea_pig,horse,human,macaque,marmoset,mouse,orangutan,panda,rabbit,rat, lincRNA lincRNA A549@8.84552,AG04450@9.01192,BJ@9.50372,GM12878@10.1299,H1HESC@9.70531,HELAS3@17.1692,HEPG2@14.7112,HMEC@4.93196,HSMM@5.89157,HUVEC@14.7951,K562@10.098,MCF7@5.46176,NHEK@7.00768,NHLF@7.61499,SKNSHRA@10.9768, 0 0 0 0 ENSG00000243715.1 ENST00000471265.1 chr3:54908632-54935282 7 2071 24567 exonic 5.70 0 0,0,0 0 0,0,0 18.9473684210526 51.0255627467741 46.88 25.5557701593433 56.9569748035983 19.725 32.0183486238532 54.6380917490943 23.462 0 0 chimp,dog,human,macaque, antisense antisense A549@0.003246,AG04450@0.002157,BJ@0.0274135,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0.0029705,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0.0298765,SKNSHRA@0, 0 0 0 0 ENSG00000239991.1 ENST00000485347.1 chr3:55200938-55209760 3 426 8392 intergenic -9.16 0 0,0,0 0 0,0,0 0 32.6976882745472 24.672 0 35.8971639656816 12.48 0 32.2066253574833 12.878 0 0 chimp,cow,dog,horse,human,marmoset,orangutan,panda, lincRNA lincRNA A549@0,AG04450@0,BJ@0.00834,GM12878@0,H1HESC@0,HELAS3@0.015801,HEPG2@0,HMEC@0,HSMM@0.01011,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000243572.1 ENST00000496829.1 chr3:55212200-55223242 3 471 10567 intergenic -1.89 0 0,1,0 0 0,0,0 0 32.3501466830699 0 0 32.9566575186902 0 0 36.7993754140248 1.944 0 0 cat,chimp,cow,dog,elephant,horse,human,macaque,marmoset,orangutan, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0.0575475,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0.0040705,SKNSHRA@0, 0 0 0 0 ENSG00000240708.1 ENST00000492683.1 chr3:55330228-55334766 2 1600 2936 intergenic 2.18 0 0,0,0 0 0,0,0 0 6.12738419618529 0 2.635 12.1495231607629 1.912 2.706875 14.5705040871935 2.008 0 0 chimp,human,macaque,orangutan, lincRNA lincRNA A549@0,AG04450@0.005738,BJ@0.0305265,GM12878@0,H1HESC@0,HELAS3@0.002918,HEPG2@0,HMEC@0,HSMM@0.0228045,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0.0313425,SKNSHRA@0.0028375, 0 0 0 0 ENSG00000242568.1 ENST00000469806.1 chr3:55369490-55384943 2 585 14866 intergenic -0.49 0 0,0,0 0 0,0,0 0 23.7730391497377 0 0 21.3958697699448 0 0 21.3725951836405 1.645 0 0 cat,chimp,cow,dog,elephant,horse,human,macaque,marmoset,orangutan, lincRNA lincRNA A549@0,AG04450@0,BJ@0.0041225,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000242775.1 ENST00000465946.1 chr3:55394471-55395857 2 382 1002 intergenic -3.83 1 0,1,0 0 0,0,0 0 107.87624750499 0 0 174.635728542914 0 0 180.341317365269 0 0 0 chimp,dog,elephant,horse,human,macaque,marmoset,orangutan, lincRNA lincRNA A549@0,AG04450@0.008397,BJ@0.101488,GM12878@0,H1HESC@0,HELAS3@0.0751075,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000244586.1 ENST00000469484.1 chr3:55521727-55522336 2 498 109 intronic -0.54 0 0,0,1 0 0,0,0 190.132530120482 0 267.699 210.124497991968 85.5963302752294 278.806 106.110441767068 0 242.012 0 0 chimp,cow,dog,guinea_pig,horse,human,marmoset,mouse,pig,rabbit,rat, antisense antisense A549@0,AG04450@0.183704,BJ@0.197761,GM12878@0.026159,H1HESC@0.018196,HELAS3@0.055639,HEPG2@0.043644,HMEC@0.10646,HSMM@0.109982,HUVEC@0,K562@0,MCF7@0,NHEK@0.0179533,NHLF@0.105583,SKNSHRA@0.0419025, 0 0 0 0 ENSG00000242317.1 ENST00000472238.1 chr3:55527858-55539289 4 559 10866 intergenic 0.27 0 0,0,0 0 0,0,0 33.08228980322 31.1841524019879 8.126 21.4400715563506 33.7905392968894 8.67 30.6940966010733 36.5015645131603 9.248 0 0 cat,chimp,cow,dog,elephant,horse,human,macaque,marmoset,orangutan,pig, lincRNA lincRNA A549@0,AG04450@0,BJ@0.011496,GM12878@0.0041635,H1HESC@0.025509,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0.0660703,NHLF@0,SKNSHRA@0.00403, 0 0 0 0 ENSG00000240777.2 ENST00000472243.2 chr3:55644631-55647132 3 550 1947 intronic -1.03 0 0,0,0 0 0,0,0 0 0 55.568 2.60727272727273 2.95531587057011 95.688 2.65090909090909 3.98253723677452 90.679 0 0 cat,chimp,dog,horse,human,macaque,marmoset,orangutan, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000240198.1 ENST00000477246.1 chr3:56974068-56994882 3 486 20324 intronic 0.49 1 0,0,0 0 0,0,0 0 3.66876599094666 0 14.798353909465 3.65685888604605 7.108 25.0205761316872 11.003936233025 9.606 0 0 cat,cow,dog,horse,human,macaque,marmoset,orangutan,panda,pig,rabbit, antisense antisense A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000240198.1 ENST00000495939.1 chr3:56974104-56975076 3 333 635 intronic -0.66 0 0,1,0 0 0,0,0 0 0 0 0 3.40157480314961 7.108 0 3.42677165354331 9.606 0 0 cat,chimp,dog,human,macaque,marmoset,orangutan,panda, antisense antisense A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000239801.1 ENST00000470427.1 chr3:57614537-57640645 2 362 25744 exonic 0 0 0,0,1 0 0,0,0 65.1823204419889 20.4023850217526 204.369 107.447513812155 23.3302905531386 230.989 118.530386740331 27.1196783716594 200.537 0 0 cat,chimp,cow,dog,elephant,guinea_pig,horse,human,macaque,marmoset,orangutan,panda,pig,rabbit, antisense antisense A549@0,AG04450@0.0378825,BJ@0,GM12878@0.040925,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0.0127575,MCF7@0.022469,NHEK@0,NHLF@0.026564,SKNSHRA@0.056152, 0 0 0 0 ENSG00000241933.1 ENST00000465933.1 chr3:57678932-57682323 2 2917 472 intergenic -2.51 0 0,0,0 0 0,0,0 9.6297565992458 0 77.348 4.49948577305451 0 189.408 4.66678093932122 0 210.057 0 0 chimp,human,marmoset, lincRNA processed_transcript A549@0.0440195,AG04450@0.0178255,BJ@0.00659,GM12878@0.128089,H1HESC@0.0439645,HELAS3@0.109509,HEPG2@0.080217,HMEC@0.007014,HSMM@0.0031235,HUVEC@0.022276,K562@0.044334,MCF7@0.031282,NHEK@0.003114,NHLF@0.0033275,SKNSHRA@0.0277605, 0 0 0 0 ENSG00000244161.1 ENST00000488720.1 chr3:58148274-58156363 2 3707 4380 exonic 10.20 1 0,1,1 0 0,0,0 39.6244942001618 51.6162100456621 47.875 35.4130024278392 56.2079908675799 73.295 42.8111680604262 55.8769406392694 62.953 0 0 chimp,human,macaque,orangutan,panda, antisense antisense A549@0.186094,AG04450@0.0018745,BJ@0,GM12878@0,H1HESC@0.002721,HELAS3@0.0045015,HEPG2@0.0005865,HMEC@0,HSMM@0.004498,HUVEC@0.002751,K562@0.000722,MCF7@0,NHEK@0,NHLF@0.001046,SKNSHRA@0.007759, 0 0 0 0 ENSG00000244161.1 ENST00000472922.1 chr3:58149700-58151041 2 569 770 intronic 3.51 0 0,0,0 0 0,0,0 0 23.5896103896104 70.319 12.0105448154657 6.06363636363636 21.794 18.8875219683656 6.33896103896104 21.094 0 0 chimp,cow,dog,horse,human,macaque,marmoset,orangutan, antisense antisense A549@0.186094,AG04450@0.0018745,BJ@0,GM12878@0,H1HESC@0.002721,HELAS3@0.0045015,HEPG2@0.0005865,HMEC@0,HSMM@0.004498,HUVEC@0.002751,K562@0.000722,MCF7@0,NHEK@0,NHLF@0.001046,SKNSHRA@0.007759, 0 0 0 0 ENSG00000243384.1 ENST00000472513.1 chr3:58558471-58560046 3 347 1224 intronic 0 0 0,0,1 0 0,0,0 0 0 10.6 0 0 27.935 0 1.19117647058824 27.592 0 0 chimp,human,macaque,marmoset,orangutan, antisense antisense A549@0.008869,AG04450@0.006404,BJ@0,GM12878@0,H1HESC@0,HELAS3@0.047704,HEPG2@0.0862555,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000244383.1 ENST00000464125.1 chr3:58592807-58620167 4 817 26537 exonic 1.64 0 0,1,0 0 0,0,0 0 5.57572446018766 0 23.2386780905753 6.51384858876286 0 35.8066095471236 7.0959415156197 0 0 0 human,marmoset,rabbit, antisense antisense A549@0,AG04450@0,BJ@0.0126575,GM12878@0.026911,H1HESC@0.034909,HELAS3@0,HEPG2@0.0106005,HMEC@0,HSMM@0.002506,HUVEC@0.0029615,K562@0.006522,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0.028571, 0 0 0 0 ENSG00000242428.1 ENST00000493123.1 chr3:58810163-59003363 2 568 192630 intronic 1.51 0 0,0,0 0 0,0,0 77.5211267605634 22.3395888490889 141.966 52.0105633802817 28.2487255360016 48.007 41.4295774647887 30.6056169859316 53.803 0 0 cat,chimp,cow,dog,elephant,guinea_pig,horse,human,macaque,marmoset,mouse,orangutan,panda,pig,rabbit,rat, antisense antisense A549@0,AG04450@0,BJ@0.0063325,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0.002657,SKNSHRA@0.0020615, 0 0 0 0 ENSG00000242428.1 ENST00000492031.1 chr3:58810167-58956454 3 562 145721 intronic 0.56 0 0,0,0 0 0,0,0 71.8718861209964 22.9635605026043 141.966 52.5658362989324 28.7030970141572 48.007 41.8718861209964 30.0029096698485 53.803 0 0 cat,chimp,cow,dog,guinea_pig,horse,human,macaque,marmoset,mouse,orangutan,panda,rabbit, antisense antisense A549@0,AG04450@0,BJ@0.0063325,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0.002657,SKNSHRA@0.0020615, 0 0 0 0 ENSG00000242428.1 ENST00000463703.1 chr3:58810197-58956386 4 558 145625 exonic 0.51 0 0,1,0 0 0,0,0 82.8745519713262 22.938513304721 141.966 66.3405017921147 28.6706815450644 48.007 55.8727598566308 29.9684669527897 53.803 0 0 cat,chimp,cow,dog,elephant,horse,human,macaque,marmoset,mouse,orangutan,panda,pig,rabbit, antisense antisense A549@0,AG04450@0,BJ@0.0063325,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0.002657,SKNSHRA@0.0020615, 0 0 0 0 ENSG00000242428.1 ENST00000482372.1 chr3:58810197-59004819 3 2200 192418 intronic 2.20 0 0,1,1 0 0,0,0 23.8145454545455 22.3642018937937 141.966 22.3054545454545 28.2798490785685 48.007 19.8740909090909 30.6393372761384 53.803 0 0 cat,chimp,cow,dog,elephant,guinea_pig,horse,human,macaque,marmoset,mouse,orangutan,panda,pig, antisense antisense A549@0,AG04450@0,BJ@0.0063325,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0.002657,SKNSHRA@0.0020615, 0 0 0 0 ENSG00000243295.1 ENST00000487624.1 chr3:59050876-59105235 2 679 53678 intergenic 0.35 0 0,0,0 0 0,0,0 0 8.38917247289392 0 0 6.49053616006558 0 0.346097201767305 8.85766980886024 0 0 0 chimp,horse,human,macaque,marmoset,orangutan, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0.003442,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000243903.1 ENST00000497258.1 chr3:59365750-59374430 3 693 7983 intergenic -2.90 0 0,1,0 0 0,0,0 0 4.01265188525617 0 0 30 0 0 28.4844043592634 16.411 0 0 chimp,cow,dog,elephant,horse,human,macaque,orangutan,rabbit, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0.041213,H1HESC@0,HELAS3@0.038132,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000242545.1 ENST00000486137.1 chr3:59450056-59496404 2 696 45650 intergenic 0.32 0 0,0,0 0 0,0,0 0 19.0645125958379 0 0 26.0584227820372 0 0 27.6789266155531 0 0 0 guinea_pig,human,macaque,marmoset, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000243077.1 ENST00000469148.1 chr3:62246540-62248415 2 350 1523 intronic -6.66 0 0,1,1 0 0,0,0 188.1 56.8824688115561 78.456 118.325714285714 26.0151017728168 71.733 112.425714285714 33.0564674983585 75.079 0 0 cat,chimp,dog,elephant,horse,human,macaque,marmoset,orangutan,panda,pig,rabbit, lincRNA processed_transcript A549@0.0172205,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0.088769,NHEK@0.028056,NHLF@0,SKNSHRA@0.010827, 0 0 0 0 ENSG00000241472.1 ENST00000474795.1 chr3:62247498-62304622 5 2656 54460 exonic 0.37 1 0,1,0 1 0,0,0 59.0346385542169 53.3409842085935 0 42.6185993975904 49.2731546088873 8.922 47.9213102409638 53.4634043334557 8.98 0 0 cat,chimp,dog,guinea_pig,horse,human,macaque,marmoset,orangutan,panda,pig, antisense antisense A549@0.415206,AG04450@0.092721,BJ@0.262769,GM12878@0,H1HESC@1.63799,HELAS3@0,HEPG2@0,HMEC@1.4064,HSMM@0.464852,HUVEC@0.126139,K562@0,MCF7@3.17172,NHEK@0.58942,NHLF@0.8911,SKNSHRA@0.456769, 0 0 0 0 ENSG00000241472.1 ENST00000462497.1 chr3:62247500-62304598 4 2552 54540 exonic 0.37 1 0,1,0 1 0,0,0 59.6974921630094 53.3354968830217 0 43.634012539185 49.2008800880088 10.763 48.9506269592476 53.3849834983498 10.835 0 0 cat,chimp,cow,dog,guinea_pig,horse,human,macaque,marmoset,orangutan,panda,pig, antisense antisense A549@0.415206,AG04450@0.092721,BJ@0.262769,GM12878@0,H1HESC@1.63799,HELAS3@0,HEPG2@0,HMEC@1.4064,HSMM@0.464852,HUVEC@0.126139,K562@0,MCF7@3.17172,NHEK@0.58942,NHLF@0.8911,SKNSHRA@0.456769, 0 0 0 0 ENSG00000241472.1 ENST00000475371.1 chr3:62249550-62304567 6 727 54280 exonic -5.09 0 0,1,0 1 0,0,0 5.11691884456671 53.5178703021371 0 0 49.4365512159175 10.763 0 53.6406963890936 10.835 0 0 chimp,dog,human,macaque,marmoset,orangutan, antisense antisense A549@0.415206,AG04450@0.092721,BJ@0.262769,GM12878@0,H1HESC@1.63799,HELAS3@0,HEPG2@0,HMEC@1.4064,HSMM@0.464852,HUVEC@0.126139,K562@0,MCF7@3.17172,NHEK@0.58942,NHLF@0.8911,SKNSHRA@0.456769, 0 0 0 0 ENSG00000241472.1 ENST00000479018.1 chr3:62249604-62304610 5 555 54443 exonic 1.31 0 0,1,0 1 0,0,0 6.7027027027027 53.3576401006558 0 0.947747747747748 49.2885403082123 9.974 0.954954954954955 53.4800984515916 10.04 0 0 chimp,human,macaque,marmoset,orangutan, antisense antisense A549@0.415206,AG04450@0.092721,BJ@0.262769,GM12878@0,H1HESC@1.63799,HELAS3@0,HEPG2@0,HMEC@1.4064,HSMM@0.464852,HUVEC@0.126139,K562@0,MCF7@3.17172,NHEK@0.58942,NHLF@0.8911,SKNSHRA@0.456769, 0 0 0 0 ENSG00000241472.1 ENST00000495542.1 chr3:62249717-62355005 5 497 104783 exonic -5.09 0 0,0,0 0 0,0,0 7.48490945674044 78.8052737562391 394.176 0 67.7443192120859 364.235 2.93360160965795 69.7537768531155 338.285 0 0 chimp,cow,horse,human,macaque,marmoset,orangutan,panda, antisense antisense A549@0.415206,AG04450@0.092721,BJ@0.262769,GM12878@0,H1HESC@1.63799,HELAS3@0,HEPG2@0,HMEC@1.4064,HSMM@0.464852,HUVEC@0.126139,K562@0,MCF7@3.17172,NHEK@0.58942,NHLF@0.8911,SKNSHRA@0.456769, 0 0 0 0 ENSG00000241472.1 ENST00000466893.1 chr3:62262102-62304567 4 819 41640 exonic -1.88 0 0,1,0 1 0,0,0 100.564102564103 55.8863832853026 0 25.2136752136752 51.0826849183477 10.763 19.7728937728938 55.549111431316 10.835 0 0 cat,chimp,cow,dog,elephant,guinea_pig,horse,human,macaque,marmoset,mouse,orangutan,panda,pig,rabbit,rat, antisense antisense A549@0.415206,AG04450@0.092721,BJ@0.262769,GM12878@0,H1HESC@1.63799,HELAS3@0,HEPG2@0,HMEC@1.4064,HSMM@0.464852,HUVEC@0.126139,K562@0,MCF7@3.17172,NHEK@0.58942,NHLF@0.8911,SKNSHRA@0.456769, 0 0 0 0 ENSG00000241472.1 ENST00000490916.1 chr3:62262450-62355001 4 541 92004 exonic -3.92 0 0,0,0 0 0,0,0 152.240295748614 83.4704143298118 392.024 38.1700554528651 71.1069083952872 362.007 32.6284658040665 72.9365897134907 335.237 0 0 cat,chimp,cow,dog,elephant,guinea_pig,horse,human,macaque,marmoset,orangutan,panda,pig,rabbit, antisense antisense A549@0.415206,AG04450@0.092721,BJ@0.262769,GM12878@0,H1HESC@1.63799,HELAS3@0,HEPG2@0,HMEC@1.4064,HSMM@0.464852,HUVEC@0.126139,K562@0,MCF7@3.17172,NHEK@0.58942,NHLF@0.8911,SKNSHRA@0.456769, 0 0 0 0 ENSG00000241472.1 ENST00000498655.1 chr3:62278309-62304453 6 541 25593 exonic -2.19 0 0,1,0 1 0,0,0 6.87615526802218 50.8999726487711 0 0 50.9278318290157 7.727 2.8724584103512 59.1966553354433 7.777 0 0 cat,chimp,cow,elephant,horse,human,macaque,marmoset,orangutan,panda,pig,rabbit, antisense antisense A549@0.415206,AG04450@0.092721,BJ@0.262769,GM12878@0,H1HESC@1.63799,HELAS3@0,HEPG2@0,HMEC@1.4064,HSMM@0.464852,HUVEC@0.126139,K562@0,MCF7@3.17172,NHEK@0.58942,NHLF@0.8911,SKNSHRA@0.456769, 0 0 0 0 ENSG00000241472.1 ENST00000479588.1 chr3:62279948-62304307 4 721 23632 exonic 0.62 0 0,1,0 0 0,0,0 32.3578363384189 34.9872630331754 0 32.7614424410541 37.2160206499661 7.727 39.7766990291262 43.7892264725795 7.777 0 0 cat,chimp,cow,dog,elephant,guinea_pig,horse,human,macaque,marmoset,orangutan,panda,pig,rabbit, antisense retained_intron A549@0.415206,AG04450@0.092721,BJ@0.262769,GM12878@0,H1HESC@1.63799,HELAS3@0,HEPG2@0,HMEC@1.4064,HSMM@0.464852,HUVEC@0.126139,K562@0,MCF7@3.17172,NHEK@0.58942,NHLF@0.8911,SKNSHRA@0.456769, 0 0 0 0 ENSG00000244342.1 ENST00000475886.1 chr3:62936105-63109888 7 751 173020 intergenic -1.74 0 0,0,0 0 0,0,0 0 12.2655126574962 0 13.8628495339547 10.9161831002196 0 16.254327563249 16.6281990521327 0 0 0 cat,chimp,cow,dog,elephant,horse,human,macaque,marmoset,orangutan,panda,pig,rabbit, lincRNA processed_transcript A549@0.00152,AG04450@0,BJ@0,GM12878@0.0142865,H1HESC@7.53171,HELAS3@0,HEPG2@0.0015235,HMEC@0,HSMM@0,HUVEC@0.0017025,K562@0,MCF7@0.0028795,NHEK@0,NHLF@0,SKNSHRA@0.050762, 0 0 0 0 ENSG00000244342.1 ENST00000465684.1 chr3:62936133-63110738 6 1422 173173 intergenic -1.74 0 0,0,1 0 0,0,0 0 12.2546759598783 0 7.32137834036568 10.906538548157 0 10.9521800281294 16.6135078794038 0 0 0 cat,chimp,dog,horse,human,macaque,marmoset,orangutan,panda,pig,rabbit, lincRNA processed_transcript A549@0.00152,AG04450@0,BJ@0,GM12878@0.0142865,H1HESC@7.53171,HELAS3@0,HEPG2@0.0015235,HMEC@0,HSMM@0,HUVEC@0.0017025,K562@0,MCF7@0.0028795,NHEK@0,NHLF@0,SKNSHRA@0.050762, 0 0 0 0 ENSG00000244342.1 ENST00000465262.1 chr3:62936146-63099387 6 544 162687 intergenic 3.28 0 0,0,0 0 0,0,0 1.41727941176471 12.4388980066016 0 0 11.2906931715503 0 2.15992647058824 17.3063305611389 0 0 0 cat,chimp,cow,dog,elephant,horse,human,macaque,marmoset,mouse,orangutan,rabbit, lincRNA processed_transcript A549@0.00152,AG04450@0,BJ@0,GM12878@0.0142865,H1HESC@7.53171,HELAS3@0,HEPG2@0.0015235,HMEC@0,HSMM@0,HUVEC@0.0017025,K562@0,MCF7@0.0028795,NHEK@0,NHLF@0,SKNSHRA@0.050762, 0 0 0 0 ENSG00000244342.1 ENST00000468072.1 chr3:62936146-63110738 9 1948 172628 intergenic 2.34 0 0,0,1 0 0,0,0 0.395790554414784 12.287409921913 0 5.34445585215606 10.9409713372107 0 8.59804928131417 16.6591514702134 0 0 0 chimp,dog,horse,human,macaque,marmoset,orangutan, lincRNA processed_transcript A549@0.00152,AG04450@0,BJ@0,GM12878@0.0142865,H1HESC@7.53171,HELAS3@0,HEPG2@0.0015235,HMEC@0,HSMM@0,HUVEC@0.0017025,K562@0,MCF7@0.0028795,NHEK@0,NHLF@0,SKNSHRA@0.050762, 0 0 0 0 ENSG00000244342.1 ENST00000497573.1 chr3:63091651-63099571 2 765 7153 intergenic 2.34 0 0,0,0 0 0,0,0 1.0078431372549 6.86103732699567 0 0 1.95903816580456 0 3.50457516339869 2.84090591360268 0 0 0 cat,chimp,cow,dog,horse,human,marmoset,opossum,orangutan,panda, lincRNA processed_transcript A549@0.00152,AG04450@0,BJ@0,GM12878@0.0142865,H1HESC@7.53171,HELAS3@0,HEPG2@0.0015235,HMEC@0,HSMM@0,HUVEC@0.0017025,K562@0,MCF7@0.0028795,NHEK@0,NHLF@0,SKNSHRA@0.050762, 0 0 0 0 ENSG00000256819.1 ENST00000542336.1 chr3:63263815-63266190 2 1593 780 exonic 0.57 0 0,0,0 0 0,0,0 34.1895794099184 70.7051282051282 0 34.0583804143126 66.2564102564102 0 33.6490897677338 66.8 0 0 0 chimp,cow,elephant,guinea_pig,horse,human,macaque,marmoset,orangutan,panda,pig, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0.0083035,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0.0028585,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000241359.1 ENST00000488201.1 chr3:63409272-63535727 5 553 125894 intronic -7.70 0 0,0,0 0 0,0,0 49.0470162748644 12.4387103436224 9.176 20.4918625678119 11.1243665305733 13.08 19.8915009041591 12.7221233736318 13.068 0 0 cat,chimp,dog,horse,human,macaque,marmoset,orangutan,rabbit, antisense antisense A549@0,AG04450@0,BJ@0.017347,GM12878@0,H1HESC@0.423558,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0.032999,NHEK@0,NHLF@0.006916,SKNSHRA@0.008146, 0 0 0 0 ENSG00000240549.2 ENST00000468961.2 chr3:63846321-63847495 2 671 501 intronic -13.61 0 0,0,0 0 0,0,0 0 0 0 0 5.59880239520958 0 0 16.2874251497006 0 1 1 chimp,human,macaque,marmoset,orangutan, antisense antisense A549@0,AG04450@0,BJ@0,GM12878@0.0078915,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000239653.1 ENST00000472046.1 chr3:63989698-63997824 3 2453 5669 intronic 0.95 0 0,0,1 0 0,0,0 0 19.4185923443288 344.042 1.89196901752956 20.6595519491974 342.68 1.92458214431309 23.7680366907744 355.614 0 0 chimp,horse,human,macaque,orangutan, antisense antisense A549@0.326111,AG04450@0.527537,BJ@0.369837,GM12878@1.1593,H1HESC@0.376884,HELAS3@0.456859,HEPG2@0.648162,HMEC@0.269986,HSMM@0.0640085,HUVEC@0.860473,K562@0.686928,MCF7@0.856715,NHEK@0.399035,NHLF@0.0625345,SKNSHRA@0.504675, 0 0 0 0 ENSG00000243410.1 ENST00000462717.1 chr3:63997640-64001922 2 439 3841 intronic -6.23 0 0,0,1 0 0,0,0 0 12.1960426972143 0.347 0 20.7805259047123 0 0 22.1319968758136 0 0 0 chimp,human,macaque,marmoset,orangutan, antisense antisense A549@0.005412,AG04450@0.007551,BJ@0,GM12878@0.0283385,H1HESC@0.012503,HELAS3@0.016833,HEPG2@0.028455,HMEC@0,HSMM@0.0172755,HUVEC@0.026172,K562@0.006081,MCF7@0.017146,NHEK@0.0519587,NHLF@0.004975,SKNSHRA@0.0123735, 2 44 0 0 ENSG00000241111.1 ENST00000482609.1 chr3:64053640-64088807 3 6502 28661 exonic 3.86 0 0,0,1 0 0,0,0 190.328975699785 14.6976727957852 23 153.418025223008 10.0106067478455 61.334 150.387880652107 12.7936917762814 54.247 0 0 cat,chimp,human,macaque,marmoset,orangutan, antisense antisense A549@0.0065685,AG04450@0.0033145,BJ@0.0050135,GM12878@0.0013375,H1HESC@0.015588,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0.0003505,HUVEC@0,K562@0,MCF7@1.91255,NHEK@0.001101,NHLF@0.0002965,SKNSHRA@0.0004275, 0 0 0 0 ENSG00000189196.4 ENST00000485805.1 chr3:64064037-64073039 4 2125 6871 intergenic 1.91 0 0,0,0 0 0,1,0 6.14776470588235 3.40678212778344 0 27.9689411764706 12.8196769029253 0.992 28.5637647058824 20.6042788531509 1.088 0 0 cat,chimp,cow,dog,horse,human,macaque,marmoset,orangutan,pig, lincRNA lincRNA A549@0.090325,AG04450@0.0703185,BJ@0.00682,GM12878@0,H1HESC@0.0594415,HELAS3@0.0099725,HEPG2@0,HMEC@0.023079,HSMM@0.017577,HUVEC@0.044888,K562@0,MCF7@0.0109365,NHEK@0.102709,NHLF@0.159535,SKNSHRA@0.0382425, 0 0 0 0 ENSG00000241572.1 ENST00000476308.1 chr3:64084949-64086798 2 621 1226 exonic 3.86 0 0,0,0 0 0,0,0 313.884057971014 182.371125611746 344.322 151.173913043478 96.068515497553 303.657 170.648953301127 97.2911908646003 302.806 0 0 cat,chimp,cow,dog,horse,human,macaque,marmoset,orangutan,panda,pig,rabbit, antisense antisense A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0.177996,NHEK@0,NHLF@0,SKNSHRA@0.0043175, 0 0 0 0 ENSG00000241572.1 ENST00000460946.1 chr3:64085454-64086790 2 392 942 exonic -0.01 0 0,0,0 0 0,0,0 138.125 45.3067940552017 479.515 83.5918367346939 24.807855626327 285.09 89.5739795918367 29.1847133757962 302.454 0 0 cat,chimp,cow,dog,guinea_pig,horse,human,macaque,marmoset,mouse,orangutan,panda,pig,rabbit, antisense antisense A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0.177996,NHEK@0,NHLF@0,SKNSHRA@0.0043175, 0 0 0 0 ENSG00000241101.1 ENST00000484703.1 chr3:64089146-64091732 4 492 2088 intronic 0 0 0,1,0 0 0,0,0 0 0 0 0 9.25526819923372 0 0 11.4679118773946 0 0 0 chimp,dog,horse,human,macaque,marmoset,orangutan, antisense antisense A549@0.0067995,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0.646063,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000226017.2 ENST00000473434.1 chr3:64173220-64186641 4 2492 10923 exonic 3.41 0 0,0,0 0 0,0,0 75.4153290529695 2.94616863499039 18.63 64.8455056179775 5.03076078000549 41.219 69.5276886035313 4.97482376636455 46.883 0 0 chimp,cow,dog,elephant,horse,human,macaque,marmoset,orangutan,panda,pig,rabbit, antisense antisense A549@0.0213415,AG04450@0.003592,BJ@0.0068125,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0.0023475,HMEC@0,HSMM@0,HUVEC@0.0794585,K562@0,MCF7@0.198542,NHEK@0.00708033,NHLF@0.0015635,SKNSHRA@0.002155, 0 0 0 0 ENSG00000243993.1 ENST00000485770.1 chr3:64430158-64431152 2 339 653 intergenic 0 0 0,1,0 1 0,0,0 249.227138643068 118.039816232772 67.536 332.522123893805 75.2863705972435 25.679 314.716814159292 67.8820826952527 22.145 0 0 cat,chimp,cow,dog,elephant,guinea_pig,horse,human,macaque,marmoset,mouse,opossum,orangutan,panda,rabbit,rat, lincRNA lincRNA A549@0.055817,AG04450@0.341407,BJ@0.01898,GM12878@0.0273975,H1HESC@0.0797825,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0.072774,NHEK@0,NHLF@0.0284575,SKNSHRA@0.155511, 0 0 0 0 ENSG00000244564.1 ENST00000487097.1 chr3:64430907-64440508 4 561 9034 intergenic 4.38 0 0,1,0 0 0,0,0 50.8770053475936 14.5147221607261 139.408 85.9857397504456 10.7176223156963 143.884 88.5739750445633 12.030108479079 142.605 0 0 chimp,dog,guinea_pig,human,macaque,marmoset,orangutan, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0.0043795,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000241158.1 ENST00000480831.1 chr3:64547014-64549001 2 795 1190 exonic 0.23 0 0,1,0 0 0,0,0 133.511949685535 93.3109243697479 0 112.622641509434 64.036974789916 3.144 84.4805031446541 57.4033613445378 1.854 0 0 cat,chimp,cow,dog,elephant,guinea_pig,horse,human,macaque,marmoset,mouse,orangutan,panda,pig,rabbit,rat, antisense antisense A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0.0327125,K562@0,MCF7@0,NHEK@0,NHLF@0.006949,SKNSHRA@0.0107155, 0 0 0 0 ENSG00000241158.1 ENST00000470447.1 chr3:64547022-64569416 2 889 21503 exonic -0.60 0 0,1,0 0 0,0,0 93.6242969628796 29.6202390364135 0 71.644544431946 26.5436450727805 3.144 65.0112485939258 28.4640747802632 1.854 0 0 chimp,horse,human,macaque,orangutan,panda,pig, antisense retained_intron A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0.0327125,K562@0,MCF7@0,NHEK@0,NHLF@0.006949,SKNSHRA@0.0107155, 0 0 0 0 ENSG00000241158.1 ENST00000492209.1 chr3:64547311-64554748 2 546 6889 exonic -4.49 0 0,1,0 0 0,0,0 99.3846153846154 58.4553636231674 28.56 73.4432234432235 43.3874292350123 35.581 78.4267399267399 40.7040209028887 28.511 0 0 cat,chimp,cow,dog,elephant,guinea_pig,horse,human,macaque,marmoset,mouse,orangutan,panda,pig,rabbit,rat, antisense retained_intron A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0.0327125,K562@0,MCF7@0,NHEK@0,NHLF@0.006949,SKNSHRA@0.0107155, 0 0 0 0 ENSG00000241158.1 ENST00000466225.1 chr3:64547343-64572891 3 737 24807 exonic 0.68 0 0,1,0 0 0,0,0 96.9402985074627 25.6751723303906 41.616 92.2727272727273 23.8606441730157 42.099 97.2591587516961 25.8488329906881 32.996 0 0 cat,chimp,guinea_pig,horse,human,macaque,marmoset,orangutan,panda,pig, antisense antisense A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0.0327125,K562@0,MCF7@0,NHEK@0,NHLF@0.006949,SKNSHRA@0.0107155, 0 0 0 0 ENSG00000241158.1 ENST00000474313.1 chr3:64547387-64572995 2 559 25047 exonic 0.68 0 1,1,1 0 0,0,0 95.6940966010734 25.429153191999 59.568 103.661896243292 23.6320118177826 52.07 106.316636851521 25.601149838304 45.216 0 0 cat,chimp,cow,dog,elephant,guinea_pig,horse,human,macaque,marmoset,mouse,orangutan,panda,pig,rabbit,rat, antisense antisense A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0.0327125,K562@0,MCF7@0,NHEK@0,NHLF@0.006949,SKNSHRA@0.0107155, 0 0 0 0 ENSG00000241158.1 ENST00000493124.1 chr3:64547406-64569188 3 677 21101 exonic -1.12 0 0,1,0 0 0,0,0 22.9010339734121 30.1845410170134 67.32 22.3855243722304 26.7178806691626 58.052 24.1698670605613 28.690962513625 49.167 0 0 cat,chimp,cow,dog,elephant,guinea_pig,horse,human,macaque,marmoset,mouse,orangutan,panda,pig,rabbit,rat, antisense antisense A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0.0327125,K562@0,MCF7@0,NHEK@0,NHLF@0.006949,SKNSHRA@0.0107155, 0 0 0 0 ENSG00000241158.1 ENST00000471990.1 chr3:64568499-64572573 2 768 3304 intronic -1.12 0 0,0,0 0 0,0,0 0.669270833333333 0 0 0 6.39921307506053 7.293 0 8.82838983050848 10.01 0 0 cat,chimp,cow,horse,human,macaque,marmoset,mouse,orangutan,panda, antisense retained_intron A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0.0327125,K562@0,MCF7@0,NHEK@0,NHLF@0.006949,SKNSHRA@0.0107155, 0 0 0 0 ENSG00000241684.1 ENST00000460833.1 chr3:64670585-64788401 2 3689 114125 intronic 4.61 0 0,1,0 0 0,0,0 8.91569531038222 15.4029879518072 17.68 33.195716996476 19.4835049288061 39.823 36.5196530224993 19.1353428258488 39.215 0 1 chimp,human, lincRNA retained_intron A549@0.0092065,AG04450@0.023111,BJ@0.123483,GM12878@0,H1HESC@0.028283,HELAS3@0,HEPG2@0.0029745,HMEC@0.016819,HSMM@0.0484705,HUVEC@0.334539,K562@0.0016415,MCF7@0.010349,NHEK@0.0223137,NHLF@0.0787865,SKNSHRA@1.51334, 0 0 0 0 ENSG00000241684.1 ENST00000485174.1 chr3:64670780-64729114 3 570 57760 intronic 2.64 0 0,1,0 1 0,0,0 87.4526315789474 22.5026835180055 17.68 77.3684210526316 26.9824619113573 53.363 90.1438596491228 26.2156336565097 54.502 0 0 cat,chimp,guinea_pig,horse,human,macaque,orangutan,panda, lincRNA processed_transcript A549@0.0092065,AG04450@0.023111,BJ@0.123483,GM12878@0,H1HESC@0.028283,HELAS3@0,HEPG2@0.0029745,HMEC@0.016819,HSMM@0.0484705,HUVEC@0.334539,K562@0.0016415,MCF7@0.010349,NHEK@0.0223137,NHLF@0.0787865,SKNSHRA@1.51334, 0 0 0 0 ENSG00000241684.1 ENST00000474768.1 chr3:64670780-64961211 5 2383 288040 intronic 4.61 0 0,1,0 1 0,0,0 0 16.0415115956117 17.68 2.5409148132606 23.0423552284405 53.363 6.1959714645405 23.4415845021525 54.502 0 0 chimp,human,macaque,marmoset,orangutan, lincRNA processed_transcript A549@0.0092065,AG04450@0.023111,BJ@0.123483,GM12878@0,H1HESC@0.028283,HELAS3@0,HEPG2@0.0029745,HMEC@0.016819,HSMM@0.0484705,HUVEC@0.334539,K562@0.0016415,MCF7@0.010349,NHEK@0.0223137,NHLF@0.0787865,SKNSHRA@1.51334, 0 0 0 0 ENSG00000241684.1 ENST00000481312.1 chr3:64670804-64997143 6 1964 324365 intronic 4.61 0 0,1,0 1 0,0,0 13.7744399185336 15.200530266829 17.68 37.4241344195519 22.2345629152343 54.939 39.525967413442 22.6016863718342 58.702 0 0 chimp,cow,dog,elephant,horse,human,marmoset,orangutan,panda, lincRNA processed_transcript A549@0.0092065,AG04450@0.023111,BJ@0.123483,GM12878@0,H1HESC@0.028283,HELAS3@0,HEPG2@0.0029745,HMEC@0.016819,HSMM@0.0484705,HUVEC@0.334539,K562@0.0016415,MCF7@0.010349,NHEK@0.0223137,NHLF@0.0787865,SKNSHRA@1.51334, 0 0 0 0 ENSG00000243149.1 ENST00000481004.1 chr3:65160633-65179174 4 552 17983 intergenic -5.21 0 0,0,1 0 0,0,0 0 6.70739031307346 0 0 13.7642773730746 0 0 14.4003225268309 0 0 0 chimp,horse,human,macaque,marmoset,orangutan,panda, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0.0040875, 0 0 0 0 ENSG00000240256.1 ENST00000460754.1 chr3:65858490-65940233 3 2564 79175 intronic -2.24 0 0,1,1 0 0,0,0 2.00468018720749 8.74941585096306 0 11.8685647425897 10.8786485633091 0 12.9321372854914 12.7468140195769 0 0 0 chimp,human,macaque,marmoset,orangutan,pig, processed_transcript processed_transcript A549@0.102251,AG04450@0.21678,BJ@0.585647,GM12878@0.093003,H1HESC@1.08977,HELAS3@0.71789,HEPG2@1.52916,HMEC@0.011286,HSMM@0.0280685,HUVEC@1.49422,K562@0.015436,MCF7@1.0222,NHEK@0.369903,NHLF@0.143047,SKNSHRA@0.319121, 0 0 0 0 ENSG00000240175.1 ENST00000472514.1 chr3:65879491-65910972 3 588 30889 intronic 1.15 1 0,0,0 0 0,0,0 0 11.2190100035611 0 26.6802721088435 12.5437858137201 0 25.1003401360544 15.1563339700217 1.944 0 0 cat,chimp,cow,dog,elephant,horse,human,macaque,marmoset,orangutan,panda,rabbit,rat, antisense antisense A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000241884.1 ENST00000484222.1 chr3:67346724-67356783 2 2082 7975 intergenic -1.56 0 1,1,1 0 0,0,0 0 16.7121003134796 83.913 0 17.2184326018809 221.463 5.50720461095101 18.8515360501567 212.018 0 0 chimp,elephant,human,macaque,marmoset,orangutan, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0.0009675,H1HESC@0,HELAS3@0.0079205,HEPG2@0.074385,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000241884.1 ENST00000498247.1 chr3:67353328-67355329 2 525 1474 intergenic -7.68 0 0,1,0 0 0,0,0 0 0 25.97 0 0 18.473 0 0 19.435 0 0 chimp,human,macaque,marmoset,orangutan, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0.0009675,H1HESC@0,HELAS3@0.0079205,HEPG2@0.074385,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000241316.2 ENST00000464420.1 chr3:67705121-67797534 4 959 91448 intergenic -1.78 1 0,1,0 1 0,0,0 0 15.7111910593999 0 0 23.3001049776922 14.339 0 24.122692677806 18.386 0 0 chimp,human,macaque,orangutan, lincRNA processed_transcript A549@1.8594,AG04450@0.790556,BJ@0.896031,GM12878@0.177761,H1HESC@0.696713,HELAS3@1.33862,HEPG2@0.874564,HMEC@0.296994,HSMM@1.16256,HUVEC@0.248657,K562@0.03066,MCF7@0.159133,NHEK@0.242401,NHLF@0.933105,SKNSHRA@1.11134, 0 0 0 0 ENSG00000241316.2 ENST00000482677.1 chr3:67705182-67998137 7 2219 290724 intergenic -2.36 1 0,1,0 1 0,0,0 0 13.6018904528006 0 0.430824695808923 20.9311477552593 14.339 2.31410545290671 22.1753587595107 18.386 0 0 chimp,human,macaque,marmoset,orangutan, lincRNA processed_transcript A549@1.8594,AG04450@0.790556,BJ@0.896031,GM12878@0.177761,H1HESC@0.696713,HELAS3@1.33862,HEPG2@0.874564,HMEC@0.296994,HSMM@1.16256,HUVEC@0.248657,K562@0.03066,MCF7@0.159133,NHEK@0.242401,NHLF@0.933105,SKNSHRA@1.11134, 0 0 0 0 ENSG00000241316.2 ENST00000496640.2 chr3:67718671-67801093 6 856 81556 intergenic -1.78 0 0,0,0 0 0,0,0 0 17.446846338712 0 5.72546728971963 24.7822600421796 0 9.35046728971963 25.9599171121683 0 0 0 chimp,guinea_pig,human,macaque,marmoset,orangutan,pig, lincRNA processed_transcript A549@1.8594,AG04450@0.790556,BJ@0.896031,GM12878@0.177761,H1HESC@0.696713,HELAS3@1.33862,HEPG2@0.874564,HMEC@0.296994,HSMM@1.16256,HUVEC@0.248657,K562@0.03066,MCF7@0.159133,NHEK@0.242401,NHLF@0.933105,SKNSHRA@1.11134, 0 0 0 0 ENSG00000244513.1 ENST00000482368.1 chr3:69063272-69097812 2 553 33985 exonic 3.35 0 0,0,0 0 0,0,0 29.0198915009042 31.6173311755186 25.186 201.359855334539 49.7467117846109 39.245 233.556962025316 52.2274238634692 39.85 0 0 cat,chimp,cow,dog,elephant,guinea_pig,horse,human,macaque,marmoset,mouse,opossum,orangutan,panda,pig,platypus,rabbit,rat, antisense antisense A549@0.011733,AG04450@0.0597785,BJ@0.0153185,GM12878@0,H1HESC@0,HELAS3@0.0122135,HEPG2@0,HMEC@0.007378,HSMM@0.0037075,HUVEC@0,K562@0.0041835,MCF7@0.0108675,NHEK@0.0023,NHLF@0,SKNSHRA@0.004088, 0 0 0 0 ENSG00000240842.1 ENST00000465347.1 chr3:69613257-69620273 3 452 6560 intergenic 4.72 1 0,0,0 0 0,0,0 0 16.55 0 0 22.3553353658537 0 0 23.7576219512195 0 0 0 chimp,dog,human,macaque,orangutan,rabbit, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000241667.1 ENST00000460597.1 chr3:69640492-69642272 2 747 1031 intergenic 1.42 0 0,0,0 0 0,0,0 0 55.9049466537342 111.83 57.7295850066934 48.5906886517944 66.276 28.2489959839357 49.6129970902037 56.88 0 0 chimp,cow,elephant,horse,human,macaque,marmoset,orangutan,panda,pig, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000240405.1 ENST00000488861.1 chr3:70048728-70063018 4 509 13775 intergenic 2.18 0 0,0,0 0 0,0,0 38.1768172888016 51.2765154264973 0 38.3339882121807 48.4042105263158 2.295 39.3870333988212 44.2442831215971 2.385 0 0 cat,chimp,dog,horse,human,macaque,marmoset,orangutan,panda,pig, lincRNA processed_transcript A549@0.0030375,AG04450@0.0022485,BJ@0.031541,GM12878@0,H1HESC@0.005793,HELAS3@0.0051895,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0.102666,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000240405.1 ENST00000483525.1 chr3:70048895-70064469 4 2040 13528 intergenic 6.41 0 0,1,1 0 0,0,0 9.52549019607843 52.2127439384979 0 9.56470588235294 49.2879952690716 2.295 9.82745098039216 45.0521141336487 2.385 0 0 human,macaque,marmoset,orangutan, lincRNA processed_transcript A549@0.0030375,AG04450@0.0022485,BJ@0.031541,GM12878@0,H1HESC@0.005793,HELAS3@0.0051895,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0.102666,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000242120.1 ENST00000497551.1 chr3:70246249-70255774 2 141 9382 intergenic -3.79 0 0,0,0 0 0,0,0 378.446808510638 108.869004476657 92.575 478.141843971631 103.473246642507 110.081 529 111.316776806651 111.701 0 0 cat,chimp,cow,dog,elephant,guinea_pig,horse,human,marmoset,mouse,orangutan,panda,pig, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000244203.2 ENST00000465742.2 chr3:71338920-71355004 5 695 15381 intronic 2.17 0 0,0,0 0 0,0,0 45.2439024390244 101.988555822875 0 38.3328550932568 95.3227778139021 0 29.0043041606887 103.25456791729 0 0 0 chimp,guinea_pig,human,macaque,marmoset,mouse,orangutan, lincRNA processed_transcript A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0.010025,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000242094.1 ENST00000498714.1 chr3:71619406-71623608 2 3537 663 intronic -1.19 0 0,0,1 0 0,0,0 199.333616058807 17.6470588235294 15.934 208.998869098106 26.0588235294118 49.801 205.638959570257 28.1764705882353 90.822 0 0 chimp,cow,dog,elephant,guinea_pig,horse,human,macaque,marmoset,orangutan,pig,rabbit, sense_intronic sense_intronic A549@0.106133,AG04450@0.160081,BJ@0.134487,GM12878@0.0015955,H1HESC@0.213622,HELAS3@0.226608,HEPG2@0.257413,HMEC@0.003072,HSMM@0.0027915,HUVEC@0.184568,K562@0.168746,MCF7@0.150246,NHEK@0.029119,NHLF@0.0033895,SKNSHRA@0.481997, 0 0 0 0 ENSG00000241163.1 ENST00000468646.1 chr3:72084670-72149578 7 2280 62616 intergenic 4.60 0 0,0,0 0 0,0,0 38.9802631578947 8.1995336655168 0 57.4298245614035 10.8709754695286 19.605 52.744298245614 17.8064073080363 19.92 0 0 chimp,human,macaque,marmoset,orangutan, lincRNA processed_transcript A549@0.000949,AG04450@0.007227,BJ@0.013605,GM12878@5.9059,H1HESC@0.257151,HELAS3@0,HEPG2@0.0091255,HMEC@0,HSMM@0.004381,HUVEC@0,K562@0.028747,MCF7@0,NHEK@0,NHLF@0.007857,SKNSHRA@0.260428, 0 0 0 0 ENSG00000241163.1 ENST00000470712.1 chr3:72108973-72149263 3 786 39500 intergenic 0.48 0 0,1,0 0 0,0,0 33.4427480916031 0.827443037974684 17.524 55.0165394402036 1.8213164556962 36.765 76.0076335877863 14.5897215189873 41.088 0 0 cat,chimp,dog,elephant,guinea_pig,horse,human,macaque,marmoset,mouse,opossum,orangutan,panda,rabbit,rat, lincRNA processed_transcript A549@0.000949,AG04450@0.007227,BJ@0.013605,GM12878@5.9059,H1HESC@0.257151,HELAS3@0,HEPG2@0.0091255,HMEC@0,HSMM@0.004381,HUVEC@0,K562@0.028747,MCF7@0,NHEK@0,NHLF@0.007857,SKNSHRA@0.260428, 0 0 0 0 ENSG00000241163.1 ENST00000498432.1 chr3:72109915-72149454 3 570 38965 intergenic 4.60 0 0,1,0 0 0,0,0 0 1.97179520082125 0 41.819298245614 4.01686128576928 19.605 52.7649122807018 16.1075837289876 19.92 0 0 cat,dog,elephant,horse,human,macaque,marmoset,orangutan,panda,rat, lincRNA retained_intron A549@0.000949,AG04450@0.007227,BJ@0.013605,GM12878@5.9059,H1HESC@0.257151,HELAS3@0,HEPG2@0.0091255,HMEC@0,HSMM@0.004381,HUVEC@0,K562@0.028747,MCF7@0,NHEK@0,NHLF@0.007857,SKNSHRA@0.260428, 0 0 0 0 ENSG00000241163.1 ENST00000469218.1 chr3:72109948-72283395 3 499 172944 intergenic -3.07 0 0,0,0 0 0,0,0 0 10.922113516514 0 47.7695390781563 247.000751688408 0 60.2725450901804 14.110133916181 7.402 0 0 cat,chimp,cow,dog,elephant,guinea_pig,horse,human,macaque,marmoset,mouse,orangutan,panda,rat, lincRNA processed_transcript A549@0.000949,AG04450@0.007227,BJ@0.013605,GM12878@5.9059,H1HESC@0.257151,HELAS3@0,HEPG2@0.0091255,HMEC@0,HSMM@0.004381,HUVEC@0,K562@0.028747,MCF7@0,NHEK@0,NHLF@0.007857,SKNSHRA@0.260428, 0 0 0 0 ENSG00000241163.1 ENST00000481148.1 chr3:72109992-72291716 3 489 181231 intergenic 0.18 0 0,0,0 0 0,0,0 0 10.4226870678857 0 48.7464212678937 250.027164226871 8.533 61.5051124744376 13.9066274533606 2.885 0 0 cat,chimp,cow,dog,elephant,guinea_pig,horse,human,macaque,marmoset,mouse,orangutan,panda,rat, lincRNA processed_transcript A549@0.000949,AG04450@0.007227,BJ@0.013605,GM12878@5.9059,H1HESC@0.257151,HELAS3@0,HEPG2@0.0091255,HMEC@0,HSMM@0.004381,HUVEC@0,K562@0.028747,MCF7@0,NHEK@0,NHLF@0.007857,SKNSHRA@0.260428, 0 0 0 0 ENSG00000241163.1 ENST00000464271.1 chr3:72110084-72149606 3 549 38969 intergenic 1.24 0 0,0,0 0 0,0,0 0 1.97159280453694 0 41.1967213114754 2.81895865944725 19.605 52.568306010929 16.12933357284 19.92 0 0 cat,chimp,cow,dog,horse,human,macaque,marmoset,orangutan,panda,rat, lincRNA processed_transcript A549@0.000949,AG04450@0.007227,BJ@0.013605,GM12878@5.9059,H1HESC@0.257151,HELAS3@0,HEPG2@0.0091255,HMEC@0,HSMM@0.004381,HUVEC@0,K562@0.028747,MCF7@0,NHEK@0,NHLF@0.007857,SKNSHRA@0.260428, 0 0 0 0 ENSG00000241163.1 ENST00000462492.1 chr3:72141580-72150020 3 232 8204 intergenic 3.21 0 0,1,0 1 0,0,0 0 6.59032179424671 5.852 102.745689655172 38.8956606533398 23.726 129.637931034483 13.7868113115553 25.771 0 0 chimp,elephant,human,macaque,marmoset,opossum,orangutan, lincRNA processed_transcript A549@0.000949,AG04450@0.007227,BJ@0.013605,GM12878@5.9059,H1HESC@0.257151,HELAS3@0,HEPG2@0.0091255,HMEC@0,HSMM@0.004381,HUVEC@0,K562@0.028747,MCF7@0,NHEK@0,NHLF@0.007857,SKNSHRA@0.260428, 0 0 0 0 ENSG00000241163.1 ENST00000488545.1 chr3:72146879-72150108 3 1558 1667 intergenic 4.21 0 1,1,1 1 0,0,0 0 32.4337132573485 5.852 17.8427471116816 184.360527894421 23.726 21.9550706033376 52.245950809838 25.771 0 0 cat,chimp,cow,dog,human,macaque,marmoset,orangutan,panda, lincRNA processed_transcript A549@0.000949,AG04450@0.007227,BJ@0.013605,GM12878@5.9059,H1HESC@0.257151,HELAS3@0,HEPG2@0.0091255,HMEC@0,HSMM@0.004381,HUVEC@0,K562@0.028747,MCF7@0,NHEK@0,NHLF@0.007857,SKNSHRA@0.260428, 0 0 0 0 ENSG00000243083.1 ENST00000473713.1 chr3:72200408-72223483 3 2690 20381 intergenic 1.43 0 1,1,1 0 0,0,0 0 7.81943967420637 0 11.9063197026022 8.44153868799372 20.389 13.2405204460967 9.99862617143418 27.605 0 0 chimp,elephant,horse,human,marmoset,orangutan, lincRNA lincRNA A549@0.033044,AG04450@0.0091065,BJ@0.026062,GM12878@0.0498285,H1HESC@0,HELAS3@0.168991,HEPG2@0.718955,HMEC@0,HSMM@0.020073,HUVEC@0,K562@0.0500055,MCF7@0.003037,NHEK@0,NHLF@0.0195015,SKNSHRA@0.088787, 0 0 0 0 ENSG00000243083.1 ENST00000469178.1 chr3:72201910-72221250 3 455 18881 intergenic -0.84 0 1,1,1 0 0,0,0 0 8.44065462634394 0 6.53626373626374 9.11217626185054 0 16.8571428571429 10.5450452836185 0 0 0 chimp,cow,dog,elephant,horse,human,macaque,marmoset,orangutan,panda,rabbit, lincRNA lincRNA A549@0.033044,AG04450@0.0091065,BJ@0.026062,GM12878@0.0498285,H1HESC@0,HELAS3@0.168991,HEPG2@0.718955,HMEC@0,HSMM@0.020073,HUVEC@0,K562@0.0500055,MCF7@0.003037,NHEK@0,NHLF@0.0195015,SKNSHRA@0.088787, 0 0 0 0 ENSG00000243083.1 ENST00000485404.1 chr3:72202044-72221401 3 552 18801 intergenic -1.40 0 0,1,1 0 0,0,0 0 8.47657039519174 0 58.0217391304348 9.15094941758417 0 64.6105072463768 10.5899154300303 3.223 0 0 chimp,cow,dog,elephant,guinea_pig,horse,human,macaque,marmoset,orangutan,panda,rabbit, lincRNA lincRNA A549@0.033044,AG04450@0.0091065,BJ@0.026062,GM12878@0.0498285,H1HESC@0,HELAS3@0.168991,HEPG2@0.718955,HMEC@0,HSMM@0.020073,HUVEC@0,K562@0.0500055,MCF7@0.003037,NHEK@0,NHLF@0.0195015,SKNSHRA@0.088787, 0 0 0 0 ENSG00000242618.1 ENST00000491567.1 chr3:72252095-72259043 3 944 6000 intergenic 2.50 0 0,1,1 0 0,0,0 0 7.50983333333333 197.788 2.86016949152542 14.3941666666667 155.009 2.86016949152542 11.9876666666667 162.206 0 0 chimp,cow,elephant,guinea_pig,horse,human,macaque,marmoset,orangutan,panda, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000244345.1 ENST00000478745.1 chr3:72553957-72599703 3 863 44879 intergenic 5.68 0 0,0,1 0 0,0,0 0 6.94306914146928 0 0 7.50985984536197 2.367 0 8.76683972459279 2.385 0 0 human,macaque, lincRNA lincRNA A549@0,AG04450@0.0051765,BJ@0,GM12878@0.19062,H1HESC@0.0023955,HELAS3@0,HEPG2@0.01092,HMEC@0,HSMM@0,HUVEC@0,K562@0.006183,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000239677.1 ENST00000478988.1 chr3:73672719-73674658 2 492 1445 intronic -2.97 0 0,0,0 0 0,0,0 11.849593495935 365.885813148789 11.711 24.5548780487805 345.265743944637 7.8 20.2073170731707 464.516955017301 9.571 0 0 chimp,cow,elephant,horse,human,macaque,marmoset,mouse,orangutan,panda, antisense antisense A549@0,AG04450@0.0574905,BJ@0.029392,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0.074563,SKNSHRA@0.022516, 0 0 0 0 ENSG00000242741.1 ENST00000498832.1 chr3:73857752-73952017 4 778 93481 intergenic 5.46 0 0,0,0 0 0,0,0 0 11.1018816657931 0 0 13.6728105176453 0 0 14.701458050299 0 0 0 cat,chimp,cow,guinea_pig,horse,human,macaque,marmoset,orangutan,pig, lincRNA lincRNA A549@0.03503,AG04450@0,BJ@0,GM12878@0.190256,H1HESC@0,HELAS3@0,HEPG2@0.0246945,HMEC@0.057597,HSMM@0,HUVEC@0,K562@0,MCF7@0.32753,NHEK@1.87751,NHLF@0.0074025,SKNSHRA@0.0238905, 0 0 0 0 ENSG00000239454.1 ENST00000494761.1 chr3:74048956-74054760 2 1369 4433 intergenic 0.72 1 0,0,0 0 0,0,0 19.9393718042367 39.0827881795624 0 19.2030679327977 26.8513422061809 0 25.0518626734843 26.1585833521317 0 0 0 cat,chimp,cow,elephant,guinea_pig,horse,human,macaque,marmoset,orangutan,pig,rabbit, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0.041193,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000234317.2 ENST00000431462.2 chr3:75716700-75721122 2 2993 1427 intergenic 7.08 0 0,0,1 0 0,0,0 0 0 0 0 0 0 0 0 0 0 1 chimp,human,macaque,orangutan, lincRNA lincRNA A549@0.0223115,AG04450@0.580075,BJ@0.057471,GM12878@0.0322015,H1HESC@0.196625,HELAS3@0.017083,HEPG2@0.0041555,HMEC@0,HSMM@0.12757,HUVEC@0.045314,K562@0.036823,MCF7@0.0741945,NHEK@0.171247,NHLF@0.344124,SKNSHRA@0.278015, 0 0 0 0 ENSG00000242516.1 ENST00000463183.1 chr3:75721542-75728454 6 1327 5575 intergenic -3.01 1 1,1,1 0 0,0,0 0 0 0 0 0 0 0 0 0 0 0 chimp,human,macaque,orangutan, lincRNA processed_transcript A549@0.275374,AG04450@4.78472,BJ@0.032067,GM12878@0.003996,H1HESC@0.405465,HELAS3@0.565995,HEPG2@0.182258,HMEC@0.035188,HSMM@0.0271205,HUVEC@0,K562@0.286427,MCF7@0.629514,NHEK@2.33323,NHLF@0.754223,SKNSHRA@0.741744, 0 0 0 0 ENSG00000242516.1 ENST00000492922.1 chr3:75723564-75725776 2 2124 86 intergenic -0.26 0 0,0,1 0 0,0,0 0 0 0 0 0 0 0 0 0 0 0 NA lincRNA processed_transcript A549@0.275374,AG04450@4.78472,BJ@0.032067,GM12878@0.003996,H1HESC@0.405465,HELAS3@0.565995,HEPG2@0.182258,HMEC@0.035188,HSMM@0.0271205,HUVEC@0,K562@0.286427,MCF7@0.629514,NHEK@2.33323,NHLF@0.754223,SKNSHRA@0.741744, 0 0 0 0 ENSG00000244461.1 ENST00000465795.1 chr3:78087856-78095945 3 406 7679 intergenic -4.54 0 0,0,0 0 0,0,0 0 0 0 0 5.8201588748535 2.868 0 7.46907149368407 2.916 0 0 cat,chimp,dog,elephant,horse,human,macaque,marmoset,orangutan,panda, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000240573.1 ENST00000461186.1 chr3:78136555-78141421 3 551 4311 intergenic -5.55 0 0,0,0 0 0,0,0 0 5.14961725817676 0 2.50453720508167 4.7223382045929 0 5.46642468239564 5.80607747622361 0 0 0 chimp,horse,human,macaque,marmoset,orangutan, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000240241.1 ENST00000484679.1 chr3:78316090-78340341 3 573 23674 intergenic -8.87 0 0,0,0 0 0,0,0 0 5.13964686998395 0 0 16.6490664864408 0 0 17.2293655487032 0 0 0 cat,chimp,dog,human,macaque,marmoset,orangutan,panda, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0.013829,H1HESC@0.0038275,HELAS3@0,HEPG2@0.006285,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000240241.1 ENST00000461528.1 chr3:78316093-78343206 3 539 26570 intergenic 0 0 0,0,0 0 0,0,0 0 5.43304478735416 0 69.8256029684601 18.819345126082 0 84.3803339517625 19.3368084305608 0 0 0 chimp,cow,dog,elephant,guinea_pig,horse,human,macaque,marmoset,mouse,orangutan,panda,rabbit,rat, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0.013829,H1HESC@0.0038275,HELAS3@0,HEPG2@0.006285,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000240241.1 ENST00000496674.1 chr3:78316156-78343881 4 335 27384 intergenic 0 0 0,0,0 0 0,0,0 0 5.27154542798715 0 81.5462686567164 18.6240870581361 0 97.9701492537313 19.2109991235758 0 0 0 chimp,dog,guinea_pig,horse,human,macaque,marmoset,orangutan, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0.013829,H1HESC@0.0038275,HELAS3@0,HEPG2@0.006285,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000242828.1 ENST00000482003.1 chr3:80810193-80838114 3 400 27517 intergenic -0.87 0 0,0,1 0 0,0,0 0 6.62328742232075 0 0 7.85081949340408 0 0 9.03594141803249 0 0 0 chimp,horse,human,macaque,marmoset,orangutan, lincRNA lincRNA A549@0.006854,AG04450@0,BJ@0.0484225,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0.027181,HUVEC@0.0680885,K562@0.846819,MCF7@0.005102,NHEK@0.104499,NHLF@0.004788,SKNSHRA@0.0202485, 0 0 0 0 ENSG00000242781.1 ENST00000473938.1 chr3:80814048-80838505 5 707 23742 intergenic 1.83 0 0,0,1 0 0,0,0 0 7.67639625979277 0 0 9.09910706764384 0 0 10.2025103192654 0 0 0 chimp,human,orangutan, lincRNA lincRNA A549@0,AG04450@0,BJ@0.0234995,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0.0265365,K562@0.528976,MCF7@0,NHEK@0.0190847,NHLF@0,SKNSHRA@0.003192, 0 0 0 0 ENSG00000243694.1 ENST00000482617.1 chr3:81043019-81144798 2 594 101183 intergenic -0.35 0 0,1,0 0 0,0,0 259.227272727273 6.20792030281767 0 525.069023569024 11.7231155431248 0 534.042087542088 15.4473874069755 0 0 0 chimp,cow,dog,elephant,guinea_pig,horse,human,macaque,marmoset,mouse,opossum,orangutan,panda,platypus,rabbit,rat, lincRNA lincRNA A549@0.0046345,AG04450@0,BJ@0.0081205,GM12878@0.554843,H1HESC@0,HELAS3@0,HEPG2@0.0218275,HMEC@0,HSMM@0.003825,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000243694.1 ENST00000466625.1 chr3:81143794-81144462 2 320 346 intergenic -0.22 0 0,0,1 0 0,0,0 223.525 281.150289017341 0 386.2875 427.416184971098 0 404.38125 454.251445086705 0 0 0 chimp,cow,dog,elephant,guinea_pig,horse,human,macaque,marmoset,mouse,orangutan,panda,platypus,rabbit,rat, lincRNA lincRNA A549@0.0046345,AG04450@0,BJ@0.0081205,GM12878@0.554843,H1HESC@0,HELAS3@0,HEPG2@0.0218275,HMEC@0,HSMM@0.003825,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000242145.1 ENST00000474149.1 chr3:81257344-81258065 2 551 168 intergenic 2.71 0 0,0,0 0 0,0,0 0 0 0 0 0 0 2.20508166969147 0 0 0 0 chimp,human,macaque,orangutan, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000241593.1 ENST00000478239.1 chr3:81295730-81304680 4 557 8387 intergenic 2.14 0 0,0,0 0 0,0,0 0 10.0097770358889 0 0 20.8987719089066 1.673 0 22.2459759151067 1.757 0 0 chimp,human,macaque,marmoset,orangutan, lincRNA lincRNA A549@0.0042815,AG04450@0.0023225,BJ@0.010771,GM12878@0.0121485,H1HESC@0,HELAS3@0,HEPG2@0.0127405,HMEC@0,HSMM@0.002248,HUVEC@0.012932,K562@0.002422,MCF7@0,NHEK@0.001302,NHLF@0.0038485,SKNSHRA@0.0274235, 0 0 0 0 ENSG00000241593.1 ENST00000464131.1 chr3:81296244-81346496 5 1009 49235 intergenic 2.14 0 0,0,1 0 0,0,0 0 18.6185843404082 0 23.9197224975223 26.1766020107647 0 32.2576808721506 28.0870315832233 0 0 0 chimp,human,macaque,marmoset,orangutan, lincRNA lincRNA A549@0.0042815,AG04450@0.0023225,BJ@0.010771,GM12878@0.0121485,H1HESC@0,HELAS3@0,HEPG2@0.0127405,HMEC@0,HSMM@0.002248,HUVEC@0.012932,K562@0.002422,MCF7@0,NHEK@0.001302,NHLF@0.0038485,SKNSHRA@0.0274235, 0 0 0 0 ENSG00000242190.1 ENST00000497946.1 chr3:81811857-81813907 3 373 1673 intergenic -5.46 0 0,0,1 0 0,0,0 0 0 0 0 0 0 0 0 0 0 0 chimp,human,macaque,marmoset,orangutan, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000242009.1 ENST00000471614.1 chr3:81889698-81972012 5 586 81720 intergenic -1.34 0 0,1,1 0 0,0,0 21.1945392491468 38.6144762604014 47.619 71.2866894197952 54.892009300049 21.982 74.2269624573379 52.407342143906 22.999 0 0 cat,chimp,cow,dog,elephant,guinea_pig,horse,human,macaque,marmoset,mouse,orangutan,panda,pig,rabbit,rat, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0.033474,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0.003479,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000239440.1 ENST00000470263.1 chr3:82035289-82512826 9 1942 475579 intergenic 0.03 1 0,1,1 1 0,0,0 0 13.9813574611158 0 0 18.4387515008022 0 0 21.4536112822475 0 0 0 chimp,cow,human,macaque,marmoset,mouse,orangutan, lincRNA processed_transcript A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0.0534865,HEPG2@0.310677,HMEC@0,HSMM@0,HUVEC@0,K562@0.0578615,MCF7@0.0021075,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000239440.1 ENST00000494340.1 chr3:82035303-82251605 4 520 215776 intergenic -1.74 0 0,1,1 1 0,0,0 0 24.2338211849325 0 0 29.1536083716447 0 0 30.3066976864897 0 0 0 chimp,cow,dog,horse,human,macaque,marmoset,orangutan, lincRNA processed_transcript A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0.0534865,HEPG2@0.310677,HMEC@0,HSMM@0,HUVEC@0,K562@0.0578615,MCF7@0.0021075,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000242641.1 ENST00000484892.1 chr3:84687557-84918726 21 7287 223842 intergenic 4.32 0 0,0,1 0 0,0,0 23.6485522162756 6.24150070138759 56.16 34.6506106765473 11.3670624815718 136.644 38.0505008919994 12.9980432626585 117.01 0 0 human,macaque,marmoset,orangutan, processed_transcript processed_transcript A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0.00256,HUVEC@0,K562@0.0003665,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000242641.1 ENST00000482721.1 chr3:84851600-84918779 4 531 66642 intergenic -2.50 0 0,0,0 0 0,0,0 0 6.99815431709732 56.16 0 14.0326670868221 136.644 0 14.3609585546652 117.01 0 0 chimp,horse,human,macaque,marmoset,orangutan,panda,rabbit, processed_transcript processed_transcript A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0.00256,HUVEC@0,K562@0.0003665,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000242641.1 ENST00000491849.1 chr3:84917279-84930830 4 448 13097 intergenic -6.78 0 0,0,0 0 0,0,0 0 17.7355119493014 0 0 30.862182179125 0 0 28.9015805146217 0 0 0 chimp,horse,human,macaque,marmoset,orangutan, processed_transcript processed_transcript A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0.00256,HUVEC@0,K562@0.0003665,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000242339.1 ENST00000488348.1 chr3:84934087-84942530 3 357 8082 intergenic 4.92 0 0,1,0 0 0,0,0 0 2.59143776292997 0 4.68627450980392 3.5 0 4.76470588235294 6.48168770106409 0 0 0 chimp,human,macaque,orangutan, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000241648.1 ENST00000467225.1 chr3:85849137-85877200 4 764 27293 intronic 10.57 0 0,0,0 0 0,0,0 0 9.76539772102737 0 31.1295811518325 22.3947532334298 0 24.7356020942408 22.1912578316785 0 0 0 chimp,human,macaque,marmoset,orangutan, antisense antisense A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000239519.1 ENST00000476021.1 chr3:86041333-86077157 2 2654 33168 intronic -2.93 1 0,1,0 0 0,0,0 0 0.486010612638688 0 0 3.71017245537868 0 0 48.6214122045345 0 0 0 chimp,elephant,guinea_pig,horse,human,macaque,marmoset,orangutan,panda,pig,rabbit, antisense antisense A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0.015664,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000239767.1 ENST00000479244.1 chr3:86313705-86316511 2 703 2101 intergenic -2.58 0 0,0,0 0 0,0,0 0 0 0 0 13.161351737268 0 0 18.990480723465 0 0 0 cat,chimp,cow,dog,guinea_pig,human,macaque,marmoset,orangutan,panda,rabbit, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000241328.1 ENST00000460586.1 chr3:86531093-86546146 2 1319 13732 intergenic 1.42 1 0,1,0 0 0,0,0 0 4.16181182639091 0 0 7.29857267695893 0 0 9.42324497524031 0 0 0 cat,chimp,cow,dog,elephant,guinea_pig,horse,human,macaque,marmoset,orangutan,pig,rabbit, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0.006842,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000232092.2 ENST00000428934.2 chr3:87138430-87147851 2 4297 5122 intergenic 7.61 0 0,0,0 0 0,0,0 0 0 0 0 0 5.019 0 0 8.032 0 1 chimp,human,macaque,orangutan, lincRNA lincRNA A549@0.226701,AG04450@0.16805,BJ@0.189709,GM12878@0.053485,H1HESC@0.000965,HELAS3@0,HEPG2@0,HMEC@0.006667,HSMM@0.200165,HUVEC@0.001131,K562@0,MCF7@0.009993,NHEK@0.0161837,NHLF@0.121207,SKNSHRA@0.018202, 0 0 0 0 ENSG00000239572.1 ENST00000462792.1 chr3:87780552-87842779 2 764 61461 intergenic 2.25 0 0,0,0 0 0,0,0 0 0.527651681554156 0 5.89005235602094 1.23691446608418 1.61 5.96858638743455 2.37220351116969 1.757 0 0 chimp,guinea_pig,horse,human,macaque,marmoset,mouse,orangutan, lincRNA lincRNA A549@0.0040525,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0.035273,MCF7@0.0171545,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000243497.1 ENST00000494128.1 chr3:93795186-93800665 2 468 5009 intronic 0.40 0 0,1,1 0 0,0,0 0 0 0 0 2.92034338191256 0 458.940170940171 95.3066480335396 328.87 0 0 cat,chimp,cow,dog,elephant,guinea_pig,horse,human,macaque,marmoset,mouse,opossum,orangutan,rabbit,rat, processed_transcript processed_transcript A549@0.291091,AG04450@0.157905,BJ@0.131565,GM12878@0.240382,H1HESC@0.154836,HELAS3@0.194853,HEPG2@0.166187,HMEC@0,HSMM@0.013531,HUVEC@0,K562@0.0803575,MCF7@0.376653,NHEK@0.185241,NHLF@0,SKNSHRA@0.337421, 0 0 0 0 ENSG00000239589.1 ENST00000462219.1 chr3:94657016-94871146 4 691 213433 intergenic 2.21 0 1,1,1 0 0,0,0 0 3.02216152141421 0 0 4.77092577061654 79.12 62.0318379160637 5.90168343227149 731.24 0 0 cat,chimp,cow,dog,elephant,guinea_pig,human,macaque,marmoset,mouse,orangutan,pig,rabbit, lincRNA lincRNA A549@0.003123,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000239589.1 ENST00000463200.1 chr3:94657107-94710172 8 1033 52018 intergenic 2.08 1 0,1,0 0 0,0,0 0 0.555346226306279 0 4.45885769603098 3.57726171709793 79.12 23.3727008712488 4.5555576915683 681.12 0 0 chimp,cow,dog,guinea_pig,human,macaque,marmoset,orangutan,pig, lincRNA lincRNA A549@0.003123,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000239589.1 ENST00000466089.1 chr3:94657118-94708914 5 626 51162 intergenic 2.08 0 0,1,0 0 0,0,0 0 0.564637817129901 0 0 3.56850787693992 79.12 25.2523961661342 4.55961455767953 675.576 0 0 chimp,cow,human,macaque,marmoset,orangutan, lincRNA lincRNA A549@0.003123,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000239589.1 ENST00000470465.1 chr3:94657121-94871353 4 753 213473 intergenic 2.21 0 1,1,1 0 0,0,0 0 3.02159523686836 0 0 4.77003180730116 79.12 19.7822045152722 5.90057759060865 674.064 0 0 chimp,dog,elephant,horse,human,macaque,marmoset,orangutan,pig,rabbit, lincRNA lincRNA A549@0.003123,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000239589.1 ENST00000466560.1 chr3:94681774-94710087 6 771 27532 intergenic 2.08 1 0,0,0 0 0,0,0 0 0 20.088 0 3.04903385151823 8.378 0 3.06632282434985 9.593 0 0 chimp,cow,human,macaque,orangutan, lincRNA lincRNA A549@0.003123,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000249225.1 ENST00000508964.1 chr3:97818752-97866978 2 465 47759 encompassing -3.02 0 0,0,0 0 0,0,0 0 0.346740928411399 0 0 3.62949391737683 0 0 7.62566217885634 0 0 0 chimp,dog,human,orangutan, antisense antisense A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000251088.1 ENST00000508616.1 chr3:97952495-98176742 4 388 223853 encompassing -6.07 0 1,1,1 1 0,0,0 0 1.715867109219 0 0 3.31862874296972 0 4.30154639175258 7.3781588810514 0 0 0 cat,chimp,cow,dog,guinea_pig,horse,human,macaque,mouse,orangutan,pig,rabbit,rat, processed_transcript processed_transcript A549@0,AG04450@0,BJ@0,GM12878@0.201134,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000248839.1 ENST00000502999.1 chr3:98241414-98244178 2 386 2376 exonic 3.52 0 0,1,0 0 0,0,0 0 39.8611111111111 140.87 21.4455958549223 60.2146464646465 107.914 122.841968911917 77.8005050505051 100.748 0 0 chimp,cow,elephant,human,macaque,marmoset,orangutan,pig,rabbit, antisense antisense A549@0.019881,AG04450@0,BJ@0.0253815,GM12878@0.0904465,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0.007025,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0.017563, 0 0 0 0 ENSG00000239445.1 ENST00000488132.1 chr3:98433174-98451492 5 764 17546 exonic 2.02 0 1,1,1 1 0,0,0 66.4306282722513 1.56787871879631 0 22.1753926701571 2.09170181237889 5.886 25.2984293193717 2.67690641741708 5.994 0 0 chimp,guinea_pig,human,macaque,orangutan,panda, antisense antisense A549@0.013315,AG04450@0.026419,BJ@0.003147,GM12878@0.216981,H1HESC@0.0477035,HELAS3@0,HEPG2@0.111669,HMEC@0.146828,HSMM@0.008387,HUVEC@0.332912,K562@0,MCF7@0,NHEK@0.104574,NHLF@0.01919,SKNSHRA@0.236864, 0 0 0 0 ENSG00000239445.1 ENST00000475816.1 chr3:98433176-98451352 4 520 17650 exonic 2.02 1 1,1,1 1 0,0,0 75.6846153846154 1.5586402266289 11.004 28.6903846153846 2.07937677053824 7.909 33.2788461538462 2.66113314447592 8.017 0 0 chimp,guinea_pig,human,macaque,marmoset,orangutan,panda, antisense antisense A549@0.013315,AG04450@0.026419,BJ@0.003147,GM12878@0.216981,H1HESC@0.0477035,HELAS3@0,HEPG2@0.111669,HMEC@0.146828,HSMM@0.008387,HUVEC@0.332912,K562@0,MCF7@0,NHEK@0.104574,NHLF@0.01919,SKNSHRA@0.236864, 0 0 0 0 ENSG00000239445.1 ENST00000461931.1 chr3:98434149-98451495 4 665 16675 exonic -0.76 0 0,1,1 1 0,0,0 65.5984962406015 1.64977511244378 0 25.4766917293233 2.20095952023988 5.886 29.0646616541353 2.81673163418291 5.994 0 0 cat,chimp,human,panda,rabbit, antisense antisense A549@0.013315,AG04450@0.026419,BJ@0.003147,GM12878@0.216981,H1HESC@0.0477035,HELAS3@0,HEPG2@0.111669,HMEC@0.146828,HSMM@0.008387,HUVEC@0.332912,K562@0,MCF7@0,NHEK@0.104574,NHLF@0.01919,SKNSHRA@0.236864, 0 0 0 0 ENSG00000239462.1 ENST00000474798.1 chr3:98621268-98737406 4 391 115741 intergenic -5.45 0 0,0,0 0 0,0,0 0 8.70840929316318 16.73 58.8644501278772 7.92259441338851 105.459 62.2583120204604 9.93896717671352 78.905 0 0 cat,chimp,cow,dog,horse,human,macaque,marmoset,orangutan,panda,rabbit, antisense antisense A549@0.0928055,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0.036904,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0.0285187,NHLF@0,SKNSHRA@0.0955935, 0 0 0 0 ENSG00000240476.1 ENST00000473756.1 chr3:98699902-98701940 2 960 1076 intergenic -5.88 0 0,1,0 0 0,0,0 119.66875 43.4014869888476 0 107.163541666667 23.2118959107807 2.151 90.675 14.453531598513 3.96 0 0 chimp,cow,dog,elephant,horse,human,macaque,marmoset,mouse,orangutan,panda,pig,rat, lincRNA lincRNA A549@3.58711,AG04450@0.217714,BJ@0.0125775,GM12878@0.013596,H1HESC@0.0047285,HELAS3@0.039051,HEPG2@0.68908,HMEC@3.32845,HSMM@0.515293,HUVEC@0.0361845,K562@0.028226,MCF7@0.0021375,NHEK@2.21465,NHLF@0.311767,SKNSHRA@2.85417, 0 0 0 0 ENSG00000243296.1 ENST00000471993.1 chr3:99219191-99224352 2 456 4703 intergenic -3.80 0 0,0,0 0 0,0,0 0 6.4163300021263 7.106 0 11.1949819264299 7.035 6.39473684210526 13.532213480757 9.327 0 0 chimp,human,macaque,marmoset,orangutan, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0.016899,SKNSHRA@0, 0 0 0 0 ENSG00000243089.1 ENST00000484675.1 chr3:99226031-99245957 2 463 19461 intergenic -10.83 1 0,0,0 0 0,0,0 192.524838012959 31.4202764503366 106.271 321.267818574514 49.8286830070397 62.162 266.874730021598 46.0141308257541 61.165 0 0 cat,chimp,cow,dog,elephant,guinea_pig,horse,human,macaque,marmoset,mouse,opossum,orangutan,panda,pig,platypus,rabbit,rat, lincRNA lincRNA A549@0,AG04450@0.106722,BJ@0.0211785,GM12878@0.048645,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0.00885,HUVEC@0.142593,K562@0,MCF7@0,NHEK@0.0422997,NHLF@0.0041495,SKNSHRA@0, 0 0 0 0 ENSG00000244464.1 ENST00000462011.1 chr3:99316908-99342664 2 2303 23451 intergenic 2.41 0 0,0,0 0 0,0,0 0 11.7841883075349 0 0 20.980938979148 0 0.738601823708207 20.887254274871 2.673 0 0 chimp,cow,dog,elephant,horse,human,macaque,orangutan,panda,pig, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0.0052475,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0.004001,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000249474.1 ENST00000490324.2 chr3:101542637-101543842 2 358 845 exonic -6.81 0 0,0,0 0 0,0,0 0 0 13.515 0 0 12 0 0 16.692 0 0 chimp,elephant,human,macaque,marmoset,orangutan, antisense antisense A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0.00536,SKNSHRA@0, 0 0 0 0 ENSG00000214407.3 ENST00000465215.1 chr3:101659703-101716770 4 2047 55014 intergenic 3.17 1 0,0,1 0 0,1,0 19.228138739619 4.64987094194205 0 37.5153883732291 6.13532918893372 16.058 39.5554469956033 7.72650598029593 16.441 0 0 chimp,cow,dog,human,macaque,marmoset,orangutan,panda,rabbit, lincRNA lincRNA A549@0,AG04450@0.010308,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0.048257,HUVEC@0,K562@0,MCF7@0,NHEK@0.012866,NHLF@0.0168995,SKNSHRA@0.0040675, 76 2 0 0 ENSG00000241280.1 ENST00000483840.1 chr3:101679202-101716770 3 1885 35679 intergenic 3.17 1 0,0,1 0 0,1,0 20.8806366047745 1.09582667675664 0 40.7395225464191 3.78867120715267 0 42.9549071618037 4.93326606687407 3.888 0 0 chimp,cow,dog,human,macaque,marmoset,orangutan,panda,rabbit, lincRNA lincRNA A549@0.0079715,AG04450@0.0358885,BJ@0.042658,GM12878@0.009758,H1HESC@0,HELAS3@0,HEPG2@0.0045855,HMEC@0.106338,HSMM@0.200221,HUVEC@0,K562@0.0055355,MCF7@0.0255305,NHEK@0.223826,NHLF@0.0042745,SKNSHRA@0.0144335, 76 2 0 0 ENSG00000241280.1 ENST00000498624.1 chr3:101679230-101715376 3 503 35639 intergenic -1.87 0 0,0,0 0 0,1,0 69.7733598409543 1.20749740452875 0 97.5089463220676 3.96843345772889 0 97.648111332008 5.10808384073627 3.888 0 0 cat,chimp,cow,dog,elephant,guinea_pig,horse,human,macaque,marmoset,mouse,orangutan,panda,rabbit,rat, lincRNA lincRNA A549@0.0079715,AG04450@0.0358885,BJ@0.042658,GM12878@0.009758,H1HESC@0,HELAS3@0,HEPG2@0.0045855,HMEC@0.106338,HSMM@0.200221,HUVEC@0,K562@0.0055355,MCF7@0.0255305,NHEK@0.223826,NHLF@0.0042745,SKNSHRA@0.0144335, 0 0 0 0 ENSG00000241754.1 ENST00000487772.1 chr3:102382007-102392757 3 512 10234 intergenic 3.67 0 0,0,1 0 0,0,0 109.51171875 31.999706859488 0 181.51953125 28.7614813367207 1.53 146.54296875 28.7885479773305 0 0 0 chimp,elephant,human,macaque,marmoset,mouse,orangutan,panda,pig,rabbit,rat, lincRNA lincRNA A549@0.004215,AG04450@0,BJ@0,GM12878@0,H1HESC@0.005651,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0.0078075,NHEK@0,NHLF@0,SKNSHRA@0.0272655, 0 0 0 0 ENSG00000256575.1 ENST00000544164.1 chr3:104241218-104331339 4 1216 88899 intergenic -4.74 0 0,0,0 0 0,0,0 0 9.215176773642 0 0 10.1750863339295 0 0 12.6000629928346 0 0 0 chimp,cow,dog,elephant,guinea_pig,human,macaque,marmoset,orangutan,rat, lincRNA lincRNA A549@0.0379055,AG04450@0,BJ@0,GM12878@0.15005,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0.0033705,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000242759.1 ENST00000484698.1 chr3:106555658-106959479 8 2710 401097 intergenic 5.21 0 0,1,0 1 0,0,0 0 8.67046624631947 0 0 11.4418257927633 4.24 2.87822878228782 25.866458736914 4.31 0 0 chimp,human,macaque,marmoset,orangutan, lincRNA processed_transcript A549@0.069437,AG04450@0.19826,BJ@0.234322,GM12878@0.156379,H1HESC@2.14741,HELAS3@0.188311,HEPG2@0.163946,HMEC@0.177852,HSMM@1.66664,HUVEC@0.0256335,K562@0.107765,MCF7@0.0217425,NHEK@0.346234,NHLF@0.247733,SKNSHRA@0.744606, 0 0 0 0 ENSG00000242759.1 ENST00000477210.1 chr3:106828788-106959485 4 448 130243 intergenic 7.09 0 0,1,0 1 0,0,0 0 13.3076710456608 0 0 14.029775112674 4.24 17.4107142857143 15.7691852921078 4.31 0 0 cat,chimp,cow,dog,horse,human,macaque,marmoset,orangutan,pig, lincRNA processed_transcript A549@0.069437,AG04450@0.19826,BJ@0.234322,GM12878@0.156379,H1HESC@2.14741,HELAS3@0.188311,HEPG2@0.163946,HMEC@0.177852,HSMM@1.66664,HUVEC@0.0256335,K562@0.107765,MCF7@0.0217425,NHEK@0.346234,NHLF@0.247733,SKNSHRA@0.744606, 0 0 0 0 ENSG00000242759.1 ENST00000479612.1 chr3:106830409-106959474 3 872 128189 intergenic 7.09 0 1,1,1 1 0,0,0 0 13.5209027295634 0 14.6284403669725 14.1550679075428 4.24 44.4461009174312 15.7662201905 4.31 0 0 cat,chimp,cow,dog,guinea_pig,horse,human,macaque,marmoset,opossum,orangutan,panda,pig,rat, lincRNA processed_transcript A549@0.069437,AG04450@0.19826,BJ@0.234322,GM12878@0.156379,H1HESC@2.14741,HELAS3@0.188311,HEPG2@0.163946,HMEC@0.177852,HSMM@1.66664,HUVEC@0.0256335,K562@0.107765,MCF7@0.0217425,NHEK@0.346234,NHLF@0.247733,SKNSHRA@0.744606, 0 0 0 0 ENSG00000242759.1 ENST00000473636.1 chr3:106830713-106959488 4 706 128063 intergenic 6.15 0 0,1,0 1 0,0,0 0 13.5342058205727 0 8.85127478753541 14.1250790626489 4.24 20.4801699716714 15.7372230855126 4.31 0 0 cat,chimp,cow,dog,guinea_pig,horse,human,macaque,marmoset,orangutan,panda,pig, lincRNA processed_transcript A549@0.069437,AG04450@0.19826,BJ@0.234322,GM12878@0.156379,H1HESC@2.14741,HELAS3@0.188311,HEPG2@0.163946,HMEC@0.177852,HSMM@1.66664,HUVEC@0.0256335,K562@0.107765,MCF7@0.0217425,NHEK@0.346234,NHLF@0.247733,SKNSHRA@0.744606, 0 0 0 0 ENSG00000243701.1 ENST00000466734.1 chr3:106959539-106967195 2 2735 4919 intergenic 7.01 0 0,1,0 1 0,0,0 19.6054844606947 1.05021345801992 0 2.21864716636197 1.98780239886156 2.89 2.93930530164534 2.0579386054076 2.95 0 0 cat,chimp,dog,human,macaque,marmoset,orangutan,panda, lincRNA processed_transcript A549@0.95947,AG04450@1.97823,BJ@1.62569,GM12878@0.073867,H1HESC@0.543797,HELAS3@1.17205,HEPG2@0.198763,HMEC@2.21287,HSMM@6.28084,HUVEC@0.544581,K562@0.029815,MCF7@1.07247,NHEK@1.92326,NHLF@2.51605,SKNSHRA@2.97797, 0 0 0 0 ENSG00000243701.1 ENST00000463143.1 chr3:106959539-107045548 3 798 85207 intergenic 0.51 0 0,1,0 1 0,0,0 0 6.67769080005164 0 7.26942355889724 9.40557700658396 2.89 30.3609022556391 11.2765383125799 2.95 0 0 chimp,human,macaque,marmoset,orangutan, lincRNA processed_transcript A549@0.95947,AG04450@1.97823,BJ@1.62569,GM12878@0.073867,H1HESC@0.543797,HELAS3@1.17205,HEPG2@0.198763,HMEC@2.21287,HSMM@6.28084,HUVEC@0.544581,K562@0.029815,MCF7@1.07247,NHEK@1.92326,NHLF@2.51605,SKNSHRA@2.97797, 0 0 0 0 ENSG00000243701.1 ENST00000490441.1 chr3:106959539-107045811 4 1145 85121 intergenic 2.33 0 0,1,1 1 0,0,0 0 6.68443744786833 0 5.06637554585153 9.4150797100598 2.89 21.1598253275109 11.2879312977996 2.95 0 0 chimp,human,macaque,marmoset,orangutan, lincRNA processed_transcript A549@0.95947,AG04450@1.97823,BJ@1.62569,GM12878@0.073867,H1HESC@0.543797,HELAS3@1.17205,HEPG2@0.198763,HMEC@2.21287,HSMM@6.28084,HUVEC@0.544581,K562@0.029815,MCF7@1.07247,NHEK@1.92326,NHLF@2.51605,SKNSHRA@2.97797, 0 0 0 0 ENSG00000243701.1 ENST00000473550.1 chr3:106959568-106964355 2 736 4049 intergenic 0.05 0 0,1,1 1 0,0,0 0 0 0 1.10054347826087 1.25166707829094 2.89 1.10869565217391 1.31094097307977 2.95 0 0 chimp,human,macaque,orangutan, lincRNA processed_transcript A549@0.95947,AG04450@1.97823,BJ@1.62569,GM12878@0.073867,H1HESC@0.543797,HELAS3@1.17205,HEPG2@0.198763,HMEC@2.21287,HSMM@6.28084,HUVEC@0.544581,K562@0.029815,MCF7@1.07247,NHEK@1.92326,NHLF@2.51605,SKNSHRA@2.97797, 0 0 0 0 ENSG00000243701.1 ENST00000495228.1 chr3:106959869-107004511 2 409 44231 intergenic -3.84 1 0,0,0 0 0,0,0 0 9.23528746806538 0 1.98044009779951 14.2465917569126 2.89 1.99511002444988 15.6338314756619 2.95 0 0 chimp,elephant,guinea_pig,human,macaque,marmoset,orangutan, lincRNA processed_transcript A549@0.95947,AG04450@1.97823,BJ@1.62569,GM12878@0.073867,H1HESC@0.543797,HELAS3@1.17205,HEPG2@0.198763,HMEC@2.21287,HSMM@6.28084,HUVEC@0.544581,K562@0.029815,MCF7@1.07247,NHEK@1.92326,NHLF@2.51605,SKNSHRA@2.97797, 0 0 0 0 ENSG00000239828.1 ENST00000496943.1 chr3:106991458-107041611 2 293 49858 intergenic -3.71 0 0,0,0 0 0,0,0 0 3.58225360022464 0 6.96245733788396 7.63849332103173 10.416 7.23549488054608 10.081170524289 10.878 0 0 horse,human,macaque,orangutan, lincRNA lincRNA A549@0,AG04450@0.0327915,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0.0147025,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0.055632, 0 0 0 0 ENSG00000245070.1 ENST00000499000.1 chr3:107149777-107182756 3 1481 31494 intergenic 1.07 0 0,1,0 0 0,0,0 0 17.3256175779514 0 4.45509790681972 26.6369467200101 11.673 4.77920324105334 28.0443576554264 13.59 0 0 cat,chimp,cow,dog,elephant,guinea_pig,horse,human,macaque,marmoset,mouse,orangutan,panda,pig,rabbit,rat, lincRNA lincRNA A549@0.0081105,AG04450@0.0060415,BJ@0,GM12878@0,H1HESC@0.0016675,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0.035411,HUVEC@0,K562@0,MCF7@0.0069275,NHEK@0,NHLF@0.006574,SKNSHRA@0.022946, 0 0 0 0 ENSG00000241469.1 ENST00000464359.1 chr3:107560509-107596915 11 1749 34637 intergenic 4.36 0 0,0,0 0 0,0,0 100.09033733562 12.9885093974651 0 59.4042309891367 21.7375350059185 3.346 64.7604345340195 23.980252331322 3.402 0 0 chimp,cow,human,macaque,marmoset,orangutan, lincRNA lincRNA A549@0.0078135,AG04450@0,BJ@0,GM12878@0.0093665,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0.0058205,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0.0018955, 0 0 0 0 ENSG00000241469.1 ENST00000488852.1 chr3:107560509-107596923 8 1189 35211 intergenic 4.36 0 0,0,0 0 0,0,0 67.7914213624895 15.4472181988583 0 68.2884777123633 22.7806367328392 2.868 73.8973927670311 25.0968163358042 2.916 0 0 cat,chimp,dog,elephant,human,macaque,marmoset,orangutan, lincRNA lincRNA A549@0.0078135,AG04450@0,BJ@0,GM12878@0.0093665,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0.0058205,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0.0018955, 0 0 0 0 ENSG00000241469.1 ENST00000461121.1 chr3:107560952-107574076 5 702 12414 intergenic 4.36 0 0,0,0 0 0,0,0 132.259259259259 25.8466247784759 13.64 98.1225071225071 41.2793620106332 9.97 105.60113960114 42.5904623811825 11.182 0 0 cat,chimp,cow,dog,elephant,guinea_pig,horse,human,macaque,marmoset,orangutan,rabbit, lincRNA lincRNA A549@0.0078135,AG04450@0,BJ@0,GM12878@0.0093665,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0.0058205,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0.0018955, 0 0 0 0 ENSG00000241469.1 ENST00000497811.1 chr3:107560952-107574076 6 850 12264 intergenic 4.36 0 0,0,0 0 0,0,0 109.230588235294 26.1627527723418 13.64 81.0376470588235 41.7842465753425 9.97 87.2141176470588 43.1113829093281 11.182 0 0 cat,chimp,cow,guinea_pig,horse,human,macaque,marmoset,mouse,orangutan, lincRNA lincRNA A549@0.0078135,AG04450@0,BJ@0,GM12878@0.0093665,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0.0058205,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0.0018955, 0 0 0 0 ENSG00000241469.1 ENST00000464823.1 chr3:107572727-107596915 6 580 23598 intergenic -0.28 0 0,0,0 0 0,0,0 41.1672413793103 13.5773794389355 0 8.77586206896552 15.9263073141792 3.346 14.5051724137931 18.6452665480125 3.402 0 0 chimp,horse,human,macaque,marmoset,orangutan,rabbit, lincRNA lincRNA A549@0.0078135,AG04450@0,BJ@0,GM12878@0.0093665,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0.0058205,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0.0018955, 0 0 0 0 ENSG00000241469.1 ENST00000466155.1 chr3:107572845-107596915 7 597 23461 intergenic -0.28 0 0,0,0 0 0,0,0 35.5510887772194 12.1219896850092 0 64.7169179229481 14.7371808533311 3.346 66.1139028475712 17.4560334171604 3.402 0 0 chimp,horse,human,macaque,marmoset,orangutan,rabbit, lincRNA lincRNA A549@0.0078135,AG04450@0,BJ@0,GM12878@0.0093665,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0.0058205,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0.0018955, 0 0 0 0 ENSG00000241469.1 ENST00000475362.1 chr3:107575934-107596926 3 558 20430 intergenic 5.99 0 0,0,0 0 0,0,0 0 5.64772393538913 0 1.71326164874552 10.2115026921194 2.151 1.74193548387097 13.1714635340186 2.187 0 0 chimp,horse,human,macaque,marmoset,mouse,orangutan, lincRNA lincRNA A549@0.0078135,AG04450@0,BJ@0,GM12878@0.0093665,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0.0058205,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0.0018955, 0 0 0 0 ENSG00000241469.1 ENST00000473528.1 chr3:107591815-107596915 5 540 4552 intergenic -6.90 0 0,0,0 0 0,0,0 0 1.05601933216169 0 0 5.71638840070299 3.346 0 7.57359402460457 3.402 0 0 chimp,elephant,human,macaque,marmoset,orangutan, lincRNA lincRNA A549@0.0078135,AG04450@0,BJ@0,GM12878@0.0093665,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0.0058205,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0.0018955, 0 0 0 0 ENSG00000239314.1 ENST00000480826.1 chr3:108820303-108829189 3 561 8321 intronic 4.01 0 0,0,0 0 0,0,0 0 6.45283018867925 20.709 0 15.9185194087249 23.135 0 18.3830068501382 21.147 0 0 chimp,horse,human,macaque,marmoset,orangutan,rabbit, antisense antisense A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0.041281,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000241224.1 ENST00000467240.1 chr3:108855561-108868970 3 1949 11456 intergenic 0.39 0 0,1,0 0 0,0,0 6.77270395074397 14.7278282122905 10.664 38.2847614161108 18.5843226256983 27.24 39.52437147255 19.8476780726257 19.197 0 0 cat,chimp,cow,dog,elephant,guinea_pig,horse,human,macaque,marmoset,mouse,orangutan,panda,rabbit,rat, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000241224.1 ENST00000477643.1 chr3:108855688-108868973 2 376 12907 intergenic -1.14 0 0,0,0 0 0,0,0 0 14.1118772758968 10.664 299.343085106383 19.8857984039668 30.264 318.010638297872 21.1686681645619 22.245 0 0 cat,chimp,cow,dog,elephant,guinea_pig,horse,human,macaque,marmoset,mouse,orangutan,panda,pig,rabbit,rat, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000241224.1 ENST00000479039.1 chr3:108855689-108868960 2 448 12821 intergenic 0.39 0 0,0,0 0 0,0,0 0 14.2065361516262 10.664 73.2477678571428 19.637781764293 30.732 74.6964285714286 20.901645737462 22.717 0 0 cat,chimp,cow,dog,elephant,guinea_pig,horse,human,macaque,marmoset,mouse,orangutan,panda,pig,rabbit,rat, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000214381.4 ENST00000494582.1 chr3:108897012-108904104 3 2517 4571 intergenic -2.99 0 0,0,0 0 0,1,0 0 0 24.969 6.626936829559 4.30824764821702 0 6.88875645609853 3.46729380879457 0 1 1 chimp,human,macaque,marmoset,orangutan, lincRNA lincRNA A549@0.149823,AG04450@0,BJ@0,GM12878@0.007441,H1HESC@0.0016465,HELAS3@0.0017935,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0.0018005, 0 0 0 0 ENSG00000249508.1 ENST00000508178.1 chr3:109056665-109101875 3 850 44356 intergenic 3.06 0 0,1,0 0 0,0,0 0 6.30899990982054 0 0 7.13833528722157 7.935 0 12.6407250428352 8.135 0 0 chimp,dog,human,macaque,marmoset,orangutan, lincRNA lincRNA A549@0.039322,AG04450@0,BJ@0,GM12878@0.0047265,H1HESC@3.01396,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000228980.3 ENST00000497996.1 chr3:109128837-109214014 5 1488 83681 intergenic 0.78 0 0,1,0 0 0,1,1 0 3.52590193711834 0 11.070564516129 4.71908796500998 47.276 50.1995967741936 8.57140808546743 432.947 0 0 chimp,guinea_pig,human,macaque,marmoset,orangutan,panda, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0.034724,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0.215087,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000228980.3 ENST00000489670.1 chr3:109129009-109137864 2 1329 7524 intergenic 2.25 1 0,1,1 0 0,1,1 0 0 0 0 2.83652312599681 47.838 0.887885628291949 3.8418394471026 411.916 0 1 chimp,human,orangutan, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0.034724,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0.215087,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000242029.1 ENST00000485384.1 chr3:109366954-109529708 3 259 162491 intergenic 3.33 1 0,0,0 0 0,0,0 0 3.65564246635198 0 0 5.91556455434455 0 0 7.50077850465564 0 0 0 cat,chimp,cow,dog,elephant,human,macaque,marmoset,orangutan,panda,pig, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0.0497375,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000240895.1 ENST00000474711.1 chr3:110246329-110248429 4 797 1297 intergenic 3.42 0 0,0,0 0 0,0,0 0 0 0 0 0 0 0 0 0 0 0 chimp,cow,horse,human,macaque,marmoset,orangutan,rabbit, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0.0036335,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0.010275,HUVEC@0.006071,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000242242.1 ENST00000474769.1 chr3:110612555-110790371 3 361 177451 intronic 0 0 0,1,0 0 0,0,0 35.1024930747922 10.2221289257316 124.426 33.7091412742382 15.6836422449014 187.812 48.7063711911357 16.8341119520318 205.891 0 0 cat,chimp,cow,dog,elephant,horse,human,macaque,marmoset,orangutan,panda,pig,rabbit, antisense antisense A549@0.170532,AG04450@0.241561,BJ@0.168351,GM12878@0,H1HESC@0.244136,HELAS3@0.15356,HEPG2@0.26167,HMEC@0.01034,HSMM@0.0947275,HUVEC@0.024247,K562@0,MCF7@0.002596,NHEK@0.003627,NHLF@0.0769735,SKNSHRA@0.162495, 0 0 0 0 ENSG00000242242.1 ENST00000476301.1 chr3:110612612-110790210 3 565 177029 intronic 0 0 0,1,0 0 0,0,0 0 10.0496472329392 172.738 14.3380530973451 15.5588123979687 218.456 24.387610619469 16.7244010868276 233.948 0 0 chimp,cow,horse,human,macaque,marmoset,orangutan,pig, antisense antisense A549@0.170532,AG04450@0.241561,BJ@0.168351,GM12878@0,H1HESC@0.244136,HELAS3@0.15356,HEPG2@0.26167,HMEC@0.01034,HSMM@0.0947275,HUVEC@0.024247,K562@0,MCF7@0.002596,NHEK@0.003627,NHLF@0.0769735,SKNSHRA@0.162495, 0 0 0 0 ENSG00000242242.1 ENST00000491709.1 chr3:110764235-110790400 3 789 25372 intronic 0 0 1,1,1 0 0,0,0 30.615969581749 10.5564401702664 112.942 20.2737642585551 9.22351411004257 180.492 26.2965779467681 10.0062667507489 199.075 0 0 chimp,cow,dog,guinea_pig,horse,human,macaque,marmoset,orangutan,pig, antisense antisense A549@0.170532,AG04450@0.241561,BJ@0.168351,GM12878@0,H1HESC@0.244136,HELAS3@0.15356,HEPG2@0.26167,HMEC@0.01034,HSMM@0.0947275,HUVEC@0.024247,K562@0,MCF7@0.002596,NHEK@0.003627,NHLF@0.0769735,SKNSHRA@0.162495, 0 0 0 0 ENSG00000242242.1 ENST00000467426.1 chr3:110764627-110788806 4 660 23513 intergenic 0 0 0,0,1 0 0,0,0 86.2727272727273 2.58997150512482 114.714 88.2863636363636 3.29260409135372 73.798 93.1787878787879 4.49249351422617 68.476 0 0 chimp,cow,dog,elephant,guinea_pig,horse,human,macaque,marmoset,mouse,orangutan,panda,pig,rat, antisense antisense A549@0.170532,AG04450@0.241561,BJ@0.168351,GM12878@0,H1HESC@0.244136,HELAS3@0.15356,HEPG2@0.26167,HMEC@0.01034,HSMM@0.0947275,HUVEC@0.024247,K562@0,MCF7@0.002596,NHEK@0.003627,NHLF@0.0769735,SKNSHRA@0.162495, 0 0 0 0 ENSG00000242242.1 ENST00000463025.1 chr3:110765749-110788237 3 410 22074 intergenic 0 0 0,0,0 0 0,0,0 0 2.75881127117876 122.202 11.9829268292683 1.81407991301984 146.63 16.390243902439 2.27095225151762 161.341 0 0 chimp,dog,elephant,horse,human,macaque,marmoset,orangutan,pig, antisense antisense A549@0.170532,AG04450@0.241561,BJ@0.168351,GM12878@0,H1HESC@0.244136,HELAS3@0.15356,HEPG2@0.26167,HMEC@0.01034,HSMM@0.0947275,HUVEC@0.024247,K562@0,MCF7@0.002596,NHEK@0.003627,NHLF@0.0769735,SKNSHRA@0.162495, 0 0 0 0 ENSG00000239311.1 ENST00000497896.1 chr3:111185160-111215942 2 409 30371 intergenic 0.14 0 0,0,0 0 0,0,0 0 7.55490434954397 0 3.50611246943765 11.9939086628692 0 3.68215158924205 16.4590234104903 0 0 0 chimp,cow,human,macaque,orangutan,rabbit, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000240766.1 ENST00000493131.1 chr3:111395583-111396280 2 489 206 intronic -2.25 0 0,1,0 0 0,0,0 79.8588957055215 0 20.72 42.3435582822086 0 14.968 48.5889570552147 0 13.049 0 0 cat,chimp,cow,dog,elephant,guinea_pig,horse,human,macaque,marmoset,mouse,orangutan,pig,rabbit,rat, antisense antisense A549@0,AG04450@0.0091295,BJ@0,GM12878@0.005956,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000239482.1 ENST00000498032.1 chr3:112021325-112051638 5 1092 29213 intergenic -2.12 0 0,0,0 0 0,0,0 0 0.178858727278951 0 3.23534798534799 3.07157772224694 41.875 4.35714285714286 14.5548899462568 164.34 0 0 chimp,human,macaque,marmoset,orangutan, lincRNA processed_transcript A549@0.0028295,AG04450@0.0063365,BJ@0,GM12878@0.00641,H1HESC@0.450315,HELAS3@0,HEPG2@0.0024865,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0.0037485,NHEK@0,NHLF@0.0035575,SKNSHRA@0.136753, 0 0 0 0 ENSG00000243081.2 ENST00000486726.2 chr3:112115494-112127981 2 1561 10924 intergenic -2.81 0 0,0,0 0 0,0,0 0 0 0 0 0 0 1.8680333119795 0 0 0 1 chimp,human,macaque,orangutan, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0.14518,H1HESC@0.0957195,HELAS3@0.008737,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0.004472,K562@0,MCF7@0.0039465,NHEK@0.00295033,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000240893.1 ENST00000481624.1 chr3:112455294-112468166 5 2017 10847 intergenic 0.11 1 0,1,0 0 0,0,0 0 8.36360283949479 0 11.9023301933565 7.77486862727021 0 12.5557759048091 10.2250391813405 0 0 0 chimp,human,macaque,marmoset,orangutan, lincRNA lincRNA A549@0.008392,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0.0081535,SKNSHRA@0, 0 0 0 0 ENSG00000242770.2 ENST00000496067.2 chr3:112521325-112531666 3 324 10013 intergenic 0 0 0,0,0 0 0,0,0 0 24.7975631678818 0 0 24.1809647458304 0 0 25.2027364426246 4.932 0 0 chimp,cow,horse,human,macaque,marmoset,orangutan,pig, antisense antisense A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0.153645,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0.022939,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000242770.2 ENST00000519700.1 chr3:112521443-112522451 2 590 416 intergenic -8.09 0 0,0,0 0 0,0,0 0 0 0 0 0 0 0 0 4.932 0 0 chimp,guinea_pig,human,macaque,marmoset,orangutan, antisense retained_intron A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0.153645,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0.022939,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000240057.1 ENST00000496389.1 chr3:112738379-112902148 4 730 163033 exonic 3.73 0 0,1,0 0 0,0,0 9.64383561643836 17.6499113676372 0 19.5082191780822 21.8445222746315 7.728 19.1082191780822 24.0467206025774 4.026 0 0 chimp,human,macaque,marmoset,rat, antisense antisense A549@0.069745,AG04450@0.112425,BJ@0.195319,GM12878@0.324738,H1HESC@0.166314,HELAS3@0.158071,HEPG2@0.0923555,HMEC@0.081835,HSMM@0.155775,HUVEC@0.59522,K562@0.009603,MCF7@0.096781,NHEK@0.0770643,NHLF@0.0952215,SKNSHRA@0.196802, 0 0 0 0 ENSG00000240057.1 ENST00000470313.1 chr3:112738380-112807562 3 488 68690 exonic 3.73 0 0,1,0 0 0,0,0 14.4262295081967 9.38311253457563 0 29.1823770491803 13.9406318241374 7.728 28.5840163934426 17.7775367593536 4.026 0 0 cat,chimp,cow,dog,human,macaque,marmoset,orangutan,panda,pig,rabbit, antisense antisense A549@0.069745,AG04450@0.112425,BJ@0.195319,GM12878@0.324738,H1HESC@0.166314,HELAS3@0.158071,HEPG2@0.0923555,HMEC@0.081835,HSMM@0.155775,HUVEC@0.59522,K562@0.009603,MCF7@0.096781,NHEK@0.0770643,NHLF@0.0952215,SKNSHRA@0.196802, 0 0 0 0 ENSG00000240057.1 ENST00000467342.1 chr3:112738383-112807871 2 571 68915 exonic 1.62 0 0,1,0 0 0,0,0 0 9.45782485670754 0 24.9404553415061 13.8951171733295 7.728 24.4290718038529 17.7194950301095 4.026 0 0 cat,chimp,cow,dog,horse,human,macaque,marmoset,mouse,orangutan,panda,pig,rabbit,rat, antisense antisense A549@0.069745,AG04450@0.112425,BJ@0.195319,GM12878@0.324738,H1HESC@0.166314,HELAS3@0.158071,HEPG2@0.0923555,HMEC@0.081835,HSMM@0.155775,HUVEC@0.59522,K562@0.009603,MCF7@0.096781,NHEK@0.0770643,NHLF@0.0952215,SKNSHRA@0.196802, 0 0 0 0 ENSG00000240057.1 ENST00000460707.1 chr3:112738388-112829322 3 761 90169 exonic 3.73 0 0,1,0 0 0,0,0 9.25098554533509 14.7307943971875 0 121.490144546649 20.6523528041788 8.86 126.42444152431 23.7456331998802 5.226 0 0 chimp,human,macaque,marmoset,orangutan, antisense antisense A549@0.069745,AG04450@0.112425,BJ@0.195319,GM12878@0.324738,H1HESC@0.166314,HELAS3@0.158071,HEPG2@0.0923555,HMEC@0.081835,HSMM@0.155775,HUVEC@0.59522,K562@0.009603,MCF7@0.096781,NHEK@0.0770643,NHLF@0.0952215,SKNSHRA@0.196802, 0 0 0 0 ENSG00000241219.1 ENST00000462010.1 chr3:112769759-112782290 3 1250 11277 intergenic 3.55 0 0,0,0 0 0,0,0 0 5.43593154207679 46.845 5.8376 15.8766515917354 112.337 12.7232 14.6681741597943 118.584 0 0 chimp,human,macaque,marmoset,orangutan,panda, lincRNA lincRNA A549@0,AG04450@0.003759,BJ@0.00393,GM12878@0,H1HESC@0.009487,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0.006526,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000243795.1 ENST00000490139.1 chr3:112861197-112886666 4 2498 22965 intergenic 0.59 0 0,0,0 0 0,0,0 16.3783026421137 39.9881558893969 93.603 15.3955164131305 37.5723056825604 50.6 17.164131305044 37.476812540823 51.735 0 0 cat,chimp,horse,human,macaque,marmoset,orangutan,panda, lincRNA lincRNA A549@0,AG04450@0.001289,BJ@0,GM12878@0,H1HESC@0,HELAS3@0.0036125,HEPG2@0,HMEC@0,HSMM@0.001822,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0.022523, 0 0 0 0 ENSG00000240057.1 ENST00000491578.1 chr3:112876555-112880867 3 479 3829 intergenic -1.58 0 0,1,0 0 0,0,0 163.35490605428 16.0302951162183 110.327 59.4906054279749 21.7623400365631 72.653 52.3131524008351 21.9960825280752 71.038 0 0 cat,chimp,cow,elephant,horse,human,macaque,orangutan, antisense antisense A549@0.069745,AG04450@0.112425,BJ@0.195319,GM12878@0.324738,H1HESC@0.166314,HELAS3@0.158071,HEPG2@0.0923555,HMEC@0.081835,HSMM@0.155775,HUVEC@0.59522,K562@0.009603,MCF7@0.096781,NHEK@0.0770643,NHLF@0.0952215,SKNSHRA@0.196802, 0 0 0 0 ENSG00000240057.1 ENST00000463017.1 chr3:112877383-112902095 3 375 24333 intergenic 0 0 0,0,0 0 0,0,0 0 23.2083590186167 160.249 0 27.010931656598 95.3 0 28.9572185920355 90.058 0 0 chimp,human,macaque,marmoset, antisense antisense A549@0.069745,AG04450@0.112425,BJ@0.195319,GM12878@0.324738,H1HESC@0.166314,HELAS3@0.158071,HEPG2@0.0923555,HMEC@0.081835,HSMM@0.155775,HUVEC@0.59522,K562@0.009603,MCF7@0.096781,NHEK@0.0770643,NHLF@0.0952215,SKNSHRA@0.196802, 0 0 0 0 ENSG00000243849.1 ENST00000473329.1 chr3:113122838-113145893 2 394 22659 exonic -2.60 1 0,0,0 0 0,0,0 20.8730964467005 4.70056048369301 11.565 36.1421319796954 11.4344851935213 42.565 36.4568527918782 14.0949732997926 55.182 0 0 cat,chimp,dog,elephant,horse,human,macaque,marmoset,orangutan,panda,rabbit, antisense antisense A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000243849.1 ENST00000498480.1 chr3:113122845-113152839 6 680 29304 exonic -0.60 1 0,0,0 0 0,0,0 24.6485294117647 4.21604559104559 13.364 30.4779411764706 10.2620802620803 45.68 32.5867647058824 12.9571730821731 58.906 0 0 chimp,cow,dog,horse,human,macaque,marmoset,orangutan,rabbit, antisense antisense A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000239453.1 ENST00000462180.1 chr3:113307595-113309036 2 463 976 intronic -4.84 0 0,0,0 0 0,0,0 0 0 0 3.97624190064795 0 2.868 5.28725701943844 2.48975409836066 3.012 0 0 chimp,human,macaque,orangutan, antisense antisense A549@0,AG04450@0,BJ@0,GM12878@0.027422,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000242659.1 ENST00000492981.1 chr3:113465719-113466255 2 301 233 exonic -1.63 1 0,1,1 0 0,0,0 0 0 11.95 117.65780730897 20.7124463519313 65.548 118.953488372093 16.480686695279 69.713 0 0 cat,cow,dog,guinea_pig,horse,human,macaque,marmoset,mouse,orangutan,panda,pig,rabbit,rat, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0.0096515,H1HESC@0.009605,HELAS3@0.026277,HEPG2@0,HMEC@0,HSMM@0.024696,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0.0191755,SKNSHRA@0.007501, 0 0 0 0 ENSG00000241490.1 ENST00000481773.1 chr3:113933160-113954241 3 740 20337 exonic 3.07 1 0,1,0 0 0,0,0 40.4648648648649 23.6825982199931 271.738 91.9378378378378 25.6633230073266 661.116 71.2378378378378 81.1810984904361 686.665 0 0 cat,chimp,cow,elephant,horse,human,macaque,marmoset,orangutan,pig,rat, lincRNA processed_transcript A549@0,AG04450@0,BJ@0,GM12878@0.112027,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0.0032725,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0.0008895, 0 0 0 0 ENSG00000241490.1 ENST00000493033.1 chr3:113933238-113955051 2 3021 18790 exonic 3.07 0 0,1,0 0 0,0,0 5.94240317775571 25.6324108568387 276.088 18.6752730883813 27.5443853113358 420.131 28.9586229725257 87.0081958488558 439.507 1 1 chimp,human,macaque,marmoset,orangutan, lincRNA retained_intron A549@0,AG04450@0,BJ@0,GM12878@0.112027,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0.0032725,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0.0008895, 0 0 0 0 ENSG00000241560.1 ENST00000496219.1 chr3:114070658-114085891 4 535 14692 exonic -2.14 0 0,0,0 0 0,0,0 129.738317757009 106.617478900082 562.158 125.527102803738 90.7254288047917 543.532 147.059813084112 86.3074462292404 536.532 0 0 cat,chimp,cow,dog,elephant,horse,human,macaque,marmoset,orangutan,panda,rabbit, antisense antisense A549@0.004003,AG04450@0.003413,BJ@0,GM12878@0.0649245,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0.005964,HUVEC@0,K562@0.00673,MCF7@0,NHEK@0,NHLF@0.002828,SKNSHRA@0, 0 0 0 0 ENSG00000241560.1 ENST00000475939.1 chr3:114070682-114107817 9 1678 35441 exonic 0.77 0 0,0,1 0 0,0,0 73.2014302741359 138.426088428656 577.302 74.6340882002384 130.604102593042 557.63 82.4505363528009 127.309584943991 550.188 0 0 cat,chimp,dog,horse,human,macaque,marmoset,orangutan,panda,rabbit, antisense antisense A549@0.004003,AG04450@0.003413,BJ@0,GM12878@0.0649245,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0.005964,HUVEC@0,K562@0.00673,MCF7@0,NHEK@0,NHLF@0.002828,SKNSHRA@0, 0 0 0 0 ENSG00000241560.1 ENST00000467304.1 chr3:114070733-114085943 5 571 14631 intronic -3.61 0 0,0,0 0 0,0,0 38.6777583187391 107.061991661541 608.875 31.30823117338 91.1036839587178 583.986 44.3730297723292 86.6672817989201 577.557 0 0 cat,chimp,cow,elephant,guinea_pig,human,macaque,marmoset,orangutan,rabbit, antisense antisense A549@0.004003,AG04450@0.003413,BJ@0,GM12878@0.0649245,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0.005964,HUVEC@0,K562@0.00673,MCF7@0,NHEK@0,NHLF@0.002828,SKNSHRA@0, 0 0 0 0 ENSG00000241560.1 ENST00000460210.1 chr3:114085564-114098025 4 392 12063 intronic -3.08 1 0,0,0 0 0,0,0 76.6071428571429 147.844731824588 234.46 106.594387755102 137.872834286662 244.953 118.68112244898 135.82558235928 238.355 0 0 cat,chimp,cow,dog,elephant,guinea_pig,horse,human,macaque,marmoset,orangutan,rabbit, antisense antisense A549@0.004003,AG04450@0.003413,BJ@0,GM12878@0.0649245,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0.005964,HUVEC@0,K562@0.00673,MCF7@0,NHEK@0,NHLF@0.002828,SKNSHRA@0, 0 0 0 0 ENSG00000241560.1 ENST00000487814.1 chr3:114106516-114107825 2 688 619 intronic 2.35 0 0,0,1 0 0,0,0 16.9418604651163 68.0452342487884 0 9.46220930232558 61.6478190630048 0 9.79651162790698 67.048465266559 0 0 0 cat,chimp,cow,dog,horse,human,macaque,marmoset,orangutan,panda,rabbit,rat, antisense antisense A549@0.004003,AG04450@0.003413,BJ@0,GM12878@0.0649245,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0.005964,HUVEC@0,K562@0.00673,MCF7@0,NHEK@0,NHLF@0.002828,SKNSHRA@0, 0 0 0 0 ENSG00000242290.1 ENST00000465249.1 chr3:114172440-114238979 3 619 65916 intronic 0.66 0 0,0,0 0 0,0,0 141.518578352181 98.598322106924 371.171 70.6849757673667 107.783967473754 757.64 107.852988691438 109.005658717155 185.258 0 0 cat,chimp,cow,dog,elephant,guinea_pig,horse,human,macaque,marmoset,mouse,opossum,orangutan,panda,rabbit,rat, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0.004267,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000241295.1 ENST00000478301.1 chr3:114403427-114406456 2 370 2657 intronic -1.44 0 0,0,0 0 0,0,0 298.813513513513 248.917199849454 0 352.967567567568 182.194580353782 5.643 402.856756756757 180.57395558901 8.242 0 0 cat,chimp,cow,dog,elephant,guinea_pig,horse,human,macaque,marmoset,mouse,opossum,orangutan,panda,rabbit,rat, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000239946.1 ENST00000498630.1 chr3:114591961-114595361 3 461 2935 exonic 0 0 0,1,0 0 0,0,0 43.2060737527115 268.761839863714 9.68 6.13882863340564 258.738330494037 0 6.39913232104121 247.855195911414 0 0 0 chimp,horse,human,macaque,marmoset,orangutan, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0.0048895, 0 0 0 0 ENSG00000242767.1 ENST00000472323.1 chr3:114819270-114821908 2 673 1963 intronic 4.17 0 0,0,0 0 0,0,0 199.453194650817 242.58991339786 799 183.673105497771 217.069791136016 606.764 207.090638930163 204.009169638309 518.783 0 0 chimp,guinea_pig,human,macaque,marmoset,mouse,orangutan,rat, lincRNA lincRNA A549@0.016368,AG04450@0.043096,BJ@0,GM12878@0,H1HESC@0,HELAS3@0.006695,HEPG2@0.004041,HMEC@0,HSMM@0.006754,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0.051775,SKNSHRA@0.098172, 2 44 0 0 ENSG00000242880.1 ENST00000459855.1 chr3:114970043-115004194 5 528 33615 intergenic 1.32 0 0,0,0 0 0,0,0 101.454545454545 21.3798304328425 0 167.310606060606 35.4931429421389 12.56 140.67803030303 40.3381526104417 14.806 0 0 cat,chimp,dog,horse,human,macaque,marmoset,mouse,orangutan,panda,rabbit,rat, processed_transcript processed_transcript A549@0.008145,AG04450@0.0181065,BJ@0.019692,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0.0051175,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000241596.1 ENST00000491321.1 chr3:115377380-115380126 2 560 2184 intronic 5.34 0 0,0,0 0 0,0,0 20.4285714285714 16.1538461538462 0 14.4803571428571 21.7504578754579 8.673 22.3446428571429 26.2495421245421 8.463 0 0 cat,chimp,dog,guinea_pig,horse,human,macaque,marmoset,orangutan,rabbit, sense_intronic sense_intronic A549@0.0115245,AG04450@0.0243345,BJ@0.024857,GM12878@0.004725,H1HESC@0,HELAS3@0.004921,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0.015722,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0.0179145, 0 0 0 0 ENSG00000240922.1 ENST00000490351.1 chr3:116078871-116088937 4 549 9511 intronic 2.10 1 0,0,1 0 0,1,0 0 4.40595100410052 0 29.7650273224044 4.2225843759857 0 42.1147540983607 4.73525391651772 0 0 0 chimp,elephant,horse,human,macaque,marmoset,orangutan,pig,rabbit, antisense antisense A549@0,AG04450@0.004053,BJ@0,GM12878@0,H1HESC@0.026848,HELAS3@0.0619915,HEPG2@0.007869,HMEC@0,HSMM@0,HUVEC@0,K562@0.0177655,MCF7@0.0256965,NHEK@0,NHLF@0,SKNSHRA@0.004103, 0 0 0 0 ENSG00000241397.1 ENST00000497854.1 chr3:116271320-116287111 2 221 15568 intronic -5.84 0 0,0,0 0 0,0,0 45.5656108597285 19.6113180883864 225.946 97.5927601809955 23.1767086330935 221.279 78.289592760181 25.3312564234327 166.838 0 0 cat,chimp,cow,dog,elephant,horse,human,macaque,marmoset,opossum,orangutan,panda, antisense antisense A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000243197.1 ENST00000477539.1 chr3:116428626-116435878 4 1748 5498 intronic 0.84 1 0,0,0 0 0,0,0 101.093821510297 41.2659148781375 0 99.1018306636155 60.8590396507821 0 101.303203661327 59.7777373590396 0 0 0 chimp,human,macaque,marmoset,orangutan,panda, antisense antisense A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0.0047025, 0 0 0 0 ENSG00000243197.1 ENST00000477805.1 chr3:116428626-116442428 3 483 13315 intronic 7.27 0 0,0,0 0 0,0,0 0 52.5352609838528 0 0 56.7820503191889 0 4.52795031055901 55.7608711978971 0 0 0 cat,chimp,cow,guinea_pig,horse,human,macaque,marmoset,orangutan,panda,rabbit, antisense antisense A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0.0047025, 0 0 0 0 ENSG00000243197.1 ENST00000496154.1 chr3:116428671-116431318 3 569 2074 intronic 1.28 0 0,0,1 0 0,0,0 79.2267135325132 82.1118611378978 0 64.1458699472759 133.786403085825 0 68.0158172231986 130.33944069431 0.486 0 0 chimp,cow,human,macaque,marmoset,orangutan,panda, antisense antisense A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0.0047025, 0 0 0 0 ENSG00000243197.1 ENST00000466856.1 chr3:116428680-116435282 4 553 6043 intronic -4.14 0 0,0,0 0 0,0,0 144.650994575045 37.5442660930002 0 133.820976491863 55.3703458547079 0 134.414104882459 54.3865629654145 2.187 0 0 chimp,cow,guinea_pig,human,macaque,marmoset,orangutan,panda, antisense antisense A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0.0047025, 0 0 0 0 ENSG00000243197.1 ENST00000466156.1 chr3:116428816-116435278 4 1050 5406 intronic 0.84 0 0,1,0 0 0,0,0 114.598095238095 34.1398446170921 0 112.805714285714 53.3246392896781 0 113.510476190476 52.1642619311876 2.187 0 0 chimp,horse,human,macaque,marmoset,orangutan,panda, antisense antisense A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0.0047025, 0 0 0 0 ENSG00000243197.1 ENST00000496242.1 chr3:116428816-116435278 4 1308 5148 intronic 0.84 0 0,1,0 0 0,0,0 103.247706422018 33.0808080808081 0 98.8119266055046 53.8991841491842 0 100.047400611621 52.5104895104895 2.187 0 0 chimp,horse,human,macaque,marmoset,orangutan,panda, antisense antisense A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0.0047025, 0 0 0 0 ENSG00000242385.1 ENST00000487512.1 chr3:116640278-116651085 2 1450 9355 intronic 4.88 1 0,0,0 0 0,0,0 38.1724137931034 4.46114377338322 74.929 69.0103448275862 16.081988241582 108.249 85.3131034482759 15.239337252806 105.43 0 0 cat,chimp,dog,elephant,guinea_pig,horse,human,macaque,orangutan,panda,rabbit, antisense antisense A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0.041433, 0 0 0 0 ENSG00000241213.1 ENST00000493545.1 chr3:117397540-117409777 4 479 11752 intronic 0.82 1 0,0,0 0 0,0,0 10.3883089770355 42.5100408441116 14.818 0 53.4930224642614 1.488 2.02922755741127 53.5685840707965 0 0 0 chimp,elephant,human,macaque,marmoset,orangutan, sense_intronic sense_intronic A549@0.403054,AG04450@2.01905,BJ@0.173683,GM12878@0,H1HESC@0.178989,HELAS3@0,HEPG2@0.0380785,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0.0139585,SKNSHRA@4.06094, 0 0 0 0 ENSG00000241213.1 ENST00000462528.1 chr3:117401761-117407708 2 439 5506 intronic 0.27 0 0,0,0 0 0,0,0 248.489749430524 56.4674900108972 53.251 290.979498861048 61.3260079912822 71.335 283.858769931663 60.7962223029422 67.704 0 0 chimp,cow,dog,elephant,guinea_pig,horse,human,macaque,marmoset,mouse,opossum,orangutan,panda,rabbit,rat, sense_intronic retained_intron A549@0.403054,AG04450@2.01905,BJ@0.173683,GM12878@0,H1HESC@0.178989,HELAS3@0,HEPG2@0.0380785,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0.0139585,SKNSHRA@4.06094, 0 0 0 0 ENSG00000241213.1 ENST00000496994.1 chr3:117407426-117409779 3 486 1863 intronic -3.11 0 0,0,0 0 0,0,0 277.248971193416 31.3387010198604 14.818 317.818930041152 31.3381642512077 1.488 311.987654320988 30.2936124530327 0 0 1 chimp,human,macaque,orangutan, sense_intronic retained_intron A549@0.403054,AG04450@2.01905,BJ@0.173683,GM12878@0,H1HESC@0.178989,HELAS3@0,HEPG2@0.0380785,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0.0139585,SKNSHRA@4.06094, 0 0 0 0 ENSG00000242816.1 ENST00000482766.1 chr3:117509520-117512612 2 508 2582 intronic 0.71 0 0,0,0 0 0,0,0 35.0275590551181 22.7482571649884 114.75 119.027559055118 6.62432223082881 59.549 121.931102362205 7.50890782339272 72.596 0 0 cat,chimp,cow,dog,horse,human,macaque,marmoset,mouse,opossum,orangutan,panda,rabbit, antisense antisense A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000243276.1 ENST00000482142.1 chr3:117723666-118276515 7 780 552057 intergenic -3.91 0 0,0,1 0 0,0,0 56.2666666666667 11.8048607299609 0 45.6692307692308 14.7800227150457 0 51.9333333333333 19.1011145588227 0 0 0 cat,chimp,cow,elephant,horse,human,macaque,marmoset,mouse,orangutan,rabbit, lincRNA lincRNA A549@0.0047395,AG04450@0,BJ@0,GM12878@0.24148,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0.0214505,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0.0049625, 0 0 0 0 ENSG00000243276.1 ENST00000476460.1 chr3:118227258-118276514 3 455 48797 intergenic -9.28 1 0,0,1 0 0,0,0 96.4571428571429 17.428059101994 0 78.2901098901099 19.0226858208496 0 89.0285714285714 20.0558845830686 0 0 0 cat,chimp,cow,dog,elephant,horse,human,macaque,marmoset,mouse,opossum,orangutan,panda,rabbit, lincRNA lincRNA A549@0.0047395,AG04450@0,BJ@0,GM12878@0.24148,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0.0214505,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0.0049625, 0 0 0 0 ENSG00000239877.1 ENST00000477009.1 chr3:118661920-118667071 4 1583 3562 intronic 1.52 1 0,0,0 0 0,0,0 18.7618445988629 68.4413250982594 0 0 58.9688377316115 0 0 59.6333520494104 0 0 0 chimp,human,macaque,marmoset,orangutan, antisense antisense A549@0.0027355,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0.003095,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0.0128745, 0 0 0 0 ENSG00000240254.1 ENST00000470790.1 chr3:118945333-119009513 4 540 63634 exonic 0.17 0 0,1,1 0 0,0,0 79.9 4.34363704937612 0 9.51111111111111 6.75527233868686 5.975 18.8944444444444 7.58468743124744 6.275 0 0 cat,chimp,cow,dog,elephant,guinea_pig,horse,human,macaque,marmoset,orangutan,panda,pig,rabbit, antisense antisense A549@0.0050775,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000241155.1 ENST00000466292.1 chr3:119033140-119041607 2 622 7843 intronic -1.21 0 0,1,0 1 0,0,0 0 13.5547622083386 0 2.86977491961415 27.349356113732 2.295 2.91479099678457 28.9228611500701 2.331 0 0 cat,chimp,cow,dog,elephant,human,macaque,marmoset,orangutan,panda, antisense antisense A549@0.50823,AG04450@0.263765,BJ@0.153904,GM12878@0.19905,H1HESC@1.84706,HELAS3@0,HEPG2@0.0102435,HMEC@0.072181,HSMM@0.117544,HUVEC@0.0457155,K562@0.167801,MCF7@0.126459,NHEK@0.0628223,NHLF@0.205612,SKNSHRA@0.451994, 0 0 0 0 ENSG00000239994.1 ENST00000489428.1 chr3:119462986-119468040 2 122 4930 exonic -4.60 0 0,0,1 0 0,0,0 82.9918032786885 28.5004056795132 0 66.5491803278689 29.7963488843813 0 116.196721311475 29.4192697768763 3.159 0 0 chimp,human,macaque,marmoset,orangutan, antisense antisense A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000242622.1 ENST00000484076.1 chr3:119813742-119855630 6 963 40915 intergenic -1.71 1 0,1,0 0 0,0,0 19.7715472481828 4.72447757546132 259.977 35.33748701973 8.30629353537822 458.697 30.7154724818276 9.98374679213003 462.486 0 0 chimp,cow,dog,elephant,guinea_pig,horse,human,macaque,marmoset,orangutan,panda,pig,rabbit, lincRNA processed_transcript A549@0.362062,AG04450@0.10744,BJ@0.180958,GM12878@0.501355,H1HESC@0.382317,HELAS3@0.837821,HEPG2@0.647616,HMEC@0.030333,HSMM@0.062473,HUVEC@0.303229,K562@0.659935,MCF7@0.662527,NHEK@0.245982,NHLF@0.0892365,SKNSHRA@0.571984, 0 0 0 0 ENSG00000242622.1 ENST00000469070.1 chr3:119814117-119818033 2 980 2934 intergenic 7.76 0 0,1,0 1 0,0,0 37.5 3.57873210633947 110.808 55.6234693877551 6.5398773006135 299.855 47.6316326530612 4.86503067484663 949.258 0 1 chimp,human,orangutan, lincRNA retained_intron A549@0.362062,AG04450@0.10744,BJ@0.180958,GM12878@0.501355,H1HESC@0.382317,HELAS3@0.837821,HEPG2@0.647616,HMEC@0.030333,HSMM@0.062473,HUVEC@0.303229,K562@0.659935,MCF7@0.662527,NHEK@0.245982,NHLF@0.0892365,SKNSHRA@0.571984, 0 0 0 0 ENSG00000242622.1 ENST00000485898.1 chr3:119814477-119817634 2 543 2612 intergenic -0.89 0 0,0,0 0 0,0,0 67.6795580110497 4.01990811638591 33.456 41.8581952117864 7.34609494640123 86.321 36.585635359116 5.46477794793262 79.344 0 0 chimp,human,macaque,marmoset,orangutan, lincRNA processed_transcript A549@0.362062,AG04450@0.10744,BJ@0.180958,GM12878@0.501355,H1HESC@0.382317,HELAS3@0.837821,HEPG2@0.647616,HMEC@0.030333,HSMM@0.062473,HUVEC@0.303229,K562@0.659935,MCF7@0.662527,NHEK@0.245982,NHLF@0.0892365,SKNSHRA@0.571984, 0 0 0 0 ENSG00000240661.1 ENST00000494869.1 chr3:120068357-120086845 3 810 17674 intergenic 8.18 0 0,0,0 0 0,0,0 234.633333333333 3.1082380898495 163.822 207.577777777778 4.3787484440421 296.241 203.465432098765 4.90279506619894 361.884 0 0 chimp,cow,elephant,guinea_pig,horse,human,macaque,mouse,orangutan,panda,rabbit,rat, antisense antisense A549@0.007546,AG04450@0.0036415,BJ@0,GM12878@0.0176545,H1HESC@0.01089,HELAS3@0.0247205,HEPG2@0,HMEC@1.24417,HSMM@0.027612,HUVEC@0,K562@0,MCF7@0.004946,NHEK@0,NHLF@0,SKNSHRA@0.010261, 0 0 0 0 ENSG00000243593.1 ENST00000490647.1 chr3:120552287-120555207 2 745 2173 intergenic -4.88 0 0,0,0 0 0,0,0 0 15.0648872526461 0 2.56644295302013 8.90888173032674 0 4.96778523489933 10.2346985734008 0 0 0 chimp,cow,horse,human,macaque,mouse,orangutan, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0.02387,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000239523.1 ENST00000485162.1 chr3:123304389-123363415 4 583 58437 exonic 4.35 0 0,1,0 1 0,0,0 129.271012006861 22.946249807485 62.449 138.168096054889 22.5275424816469 120.736 146.799313893654 24.7842120574294 115.456 0 0 chimp,human,macaque,marmoset,opossum,orangutan,panda, lincRNA processed_transcript A549@0.723077,AG04450@0.187447,BJ@0.37973,GM12878@0.379795,H1HESC@0.685515,HELAS3@0.970816,HEPG2@0.926154,HMEC@0.145467,HSMM@0.467777,HUVEC@0.2913,K562@0.295337,MCF7@2.34232,NHEK@0.604768,NHLF@0.0926505,SKNSHRA@0.9452, 0 0 0 0 ENSG00000239523.1 ENST00000463408.1 chr3:123304403-123348669 2 566 43698 exonic 4.35 0 0,1,1 1 0,0,0 98.030035335689 25.6488168794911 62.449 104.987632508834 24.6364135658383 120.736 116.840989399293 27.3900407341297 115.456 0 0 chimp,human,macaque,marmoset,mouse,orangutan,panda, lincRNA processed_transcript A549@0.723077,AG04450@0.187447,BJ@0.37973,GM12878@0.379795,H1HESC@0.685515,HELAS3@0.970816,HEPG2@0.926154,HMEC@0.145467,HSMM@0.467777,HUVEC@0.2913,K562@0.295337,MCF7@2.34232,NHEK@0.604768,NHLF@0.0926505,SKNSHRA@0.9452, 0 0 0 0 ENSG00000239523.1 ENST00000470449.1 chr3:123304403-123349668 3 757 44504 exonic 4.35 1 1,1,1 1 0,0,0 73.2959048877147 25.1842980406256 62.449 81.1188903566711 24.1902300916772 120.736 88.7714663143989 26.9165468272515 115.456 0 0 chimp,human,macaque,marmoset,orangutan,panda, lincRNA processed_transcript A549@0.723077,AG04450@0.187447,BJ@0.37973,GM12878@0.379795,H1HESC@0.685515,HELAS3@0.970816,HEPG2@0.926154,HMEC@0.145467,HSMM@0.467777,HUVEC@0.2913,K562@0.295337,MCF7@2.34232,NHEK@0.604768,NHLF@0.0926505,SKNSHRA@0.9452, 0 0 0 0 ENSG00000250174.1 ENST00000510827.1 chr3:123408491-123411254 3 497 2262 exonic -3.40 0 0,1,1 0 0,0,0 61.2877263581489 0 0 39.2474849094567 6.04155614500442 1.24 47.317907444668 4.91467727674624 1.255 0 0 cat,chimp,dog,horse,human,macaque,marmoset,orangutan,panda,pig,rabbit, antisense antisense A549@0.081199,AG04450@0,BJ@0,GM12878@0,H1HESC@0.0055025,HELAS3@0.011072,HEPG2@0.03003,HMEC@0,HSMM@0.004115,HUVEC@0,K562@0,MCF7@0.004112,NHEK@0.001751,NHLF@0,SKNSHRA@0.082058, 0 0 0 0 ENSG00000250174.1 ENST00000515464.1 chr3:123410097-123411254 2 752 403 exonic -3.72 0 0,0,1 0 0,0,0 40.5053191489362 0 0 22.311170212766 0 13.666 27.4840425531915 0 11.117 0 0 chimp,horse,human,macaque,marmoset,orangutan,panda,pig,rabbit, antisense antisense A549@0.081199,AG04450@0,BJ@0,GM12878@0,H1HESC@0.0055025,HELAS3@0.011072,HEPG2@0.03003,HMEC@0,HSMM@0.004115,HUVEC@0,K562@0,MCF7@0.004112,NHEK@0.001751,NHLF@0,SKNSHRA@0.082058, 0 0 0 0 ENSG00000244286.1 ENST00000495917.1 chr3:124500002-124506604 2 458 6142 intronic -1.64 0 0,0,0 0 0,0,0 0 0.816672093780528 0 22.1528384279476 4.68137414522957 3.57 25.4192139737991 4.193096711169 2.78 0 0 chimp,horse,human,macaque,marmoset,orangutan,panda,pig, antisense antisense A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0.004473,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000241288.1 ENST00000468859.1 chr3:125581417-125606178 2 1994 22765 intergenic 8.29 0 0,0,0 0 0,0,0 0 0 25.53 11.0591775325978 0.246430924665056 155.823 19.179037111334 1.62512629035801 179.632 0 0 cat,chimp,cow,dog,elephant,horse,human,macaque,marmoset,orangutan,panda, lincRNA lincRNA A549@0.226746,AG04450@0.398271,BJ@0.973597,GM12878@0.0716035,H1HESC@0.370046,HELAS3@0.687422,HEPG2@0.559329,HMEC@0.102571,HSMM@0.211394,HUVEC@0.474092,K562@0.0087005,MCF7@0.718281,NHEK@0.631785,NHLF@0.349544,SKNSHRA@0.735182, 0 0 0 0 ENSG00000248787.1 ENST00000510244.1 chr3:125626848-125629115 3 424 1839 intergenic 0 0 0,1,0 0 0,0,0 0 0 0 0 13.8662316476346 58.175 0 55.9048395867319 70.978 1 1 chimp,human,macaque,marmoset,orangutan, lincRNA lincRNA A549@0.106589,AG04450@0.8936,BJ@1.58469,GM12878@0.16341,H1HESC@0.504841,HELAS3@1.35763,HEPG2@0.666631,HMEC@0.326036,HSMM@0.25719,HUVEC@0.510754,K562@0.017774,MCF7@0.5107,NHEK@0.83103,NHLF@1.25867,SKNSHRA@0.88058, 0 0 0 0 ENSG00000248607.1 ENST00000508263.1 chr3:125775766-125777071 2 377 926 intronic 1.09 0 0,1,1 0 0,0,0 0 0 18.247 6.44562334217507 270 56.09 6.3262599469496 265 84.158 1 1 chimp,human,macaque,marmoset,orangutan, antisense antisense A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0.0881155,HEPG2@0.064775,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000250012.1 ENST00000511301.1 chr3:125803063-125804295 2 325 905 exonic -3.79 0 0,1,0 0 0,0,0 0 0 0 0 0 0 84.4153846153846 15.646408839779 0 0 1 chimp,human,marmoset,orangutan, antisense antisense A549@0.006221,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0.0276395,HEPG2@0.028921,HMEC@0,HSMM@0,HUVEC@0,K562@0.036734,MCF7@0,NHEK@0.0112753,NHLF@0,SKNSHRA@0.0069505, 0 0 0 0 ENSG00000250012.1 ENST00000507924.1 chr3:125803170-125814192 3 441 10577 intronic 3.19 0 0,1,0 0 0,0,0 0 0 0 0 0 0 0 14.4063534083388 0 0 1 chimp,human, antisense antisense A549@0.006221,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0.0276395,HEPG2@0.028921,HMEC@0,HSMM@0,HUVEC@0,K562@0.036734,MCF7@0,NHEK@0.0112753,NHLF@0,SKNSHRA@0.0069505, 0 0 0 0 ENSG00000250218.1 ENST00000512384.1 chr3:125822483-125826912 4 433 3990 exonic -4.53 0 0,1,0 0 0,0,0 0 19.2062656641604 0 24.8452655889146 29.7461152882206 0 29.7782909930716 40.8293233082707 0 0 0 chimp,dog,elephant,human,macaque,marmoset,panda, antisense antisense A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0.004979,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0.0207675, 0 0 0 0 ENSG00000246022.2 ENST00000500232.2 chr3:125898908-125929012 2 2322 27780 exonic 3.49 1 1,1,1 1 0,0,0 0 0 0 1.70887166236003 0.509863210943124 0 2.03531438415159 6.87818574514039 6.804 0 1 chimp,human,marmoset,orangutan, lincRNA processed_transcript A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0.023513,HELAS3@0.04859,HEPG2@0.157838,HMEC@0.001762,HSMM@0.0047005,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0.0119605, 0 0 0 0 ENSG00000246022.2 ENST00000502278.1 chr3:125898919-125927344 2 464 27959 exonic 4.73 0 0,1,0 1 0,0,0 0 0 0 0 0.506598948460245 0 0 6.834150005365 6.804 1 1 chimp,human,macaque,marmoset,orangutan, lincRNA processed_transcript A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0.023513,HELAS3@0.04859,HEPG2@0.157838,HMEC@0.001762,HSMM@0.0047005,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0.0119605, 0 0 0 0 ENSG00000246022.2 ENST00000500525.1 chr3:125926098-125929009 4 2232 673 intergenic 3.49 1 0,0,1 0 0,0,0 0 0 0 1.77777777777778 0 4.734 2.1173835125448 0 5.004 0 1 chimp,human,marmoset,orangutan, lincRNA processed_transcript A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0.023513,HELAS3@0.04859,HEPG2@0.157838,HMEC@0.001762,HSMM@0.0047005,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0.0119605, 0 0 0 0 ENSG00000250934.1 ENST00000511512.1 chr3:125985639-126010122 3 498 23981 intergenic 16.80 0 0,1,0 0 0,0,0 0 7.02180893207122 0 0 10.2069972061215 0 0 9.98006755347984 0 1 1 chimp,human,macaque,marmoset,orangutan, lincRNA lincRNA A549@0,AG04450@0.004474,BJ@0.0253175,GM12878@0,H1HESC@0.0231995,HELAS3@0.005055,HEPG2@0,HMEC@0.052775,HSMM@0.0334325,HUVEC@0,K562@0,MCF7@0,NHEK@0.016089,NHLF@0.012865,SKNSHRA@0.0045365, 0 0 0 0 ENSG00000250934.1 ENST00000512435.1 chr3:125985660-126007260 2 445 21153 intergenic 15.10 1 0,1,0 0 0,0,0 0 7.25901763343261 0 0 11.1780834869758 0 0 10.9025670117714 0 0 0 cat,chimp,dog,human,macaque,marmoset,orangutan,panda, lincRNA lincRNA A549@0,AG04450@0.004474,BJ@0.0253175,GM12878@0,H1HESC@0.0231995,HELAS3@0.005055,HEPG2@0,HMEC@0.052775,HSMM@0.0334325,HUVEC@0,K562@0,MCF7@0,NHEK@0.016089,NHLF@0.012865,SKNSHRA@0.0045365, 0 0 0 0 ENSG00000251448.1 ENST00000514281.1 chr3:126007710-126012867 3 251 4902 intergenic -0.22 0 0,0,0 0 0,0,0 0 3.02733578131375 0 9.8804780876494 1.14157486740106 5.858 10.3187250996016 1.19563443492452 5.924 0 1 chimp,human,marmoset,orangutan, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0.009742,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000249833.1 ENST00000506660.1 chr3:126111875-126113694 3 983 832 intergenic 1.18 1 0,1,0 0 0,0,0 0 0 14.74 0 0 3.984 0 0 4.638 0 1 chimp,human,marmoset,orangutan, antisense antisense A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0.0119935,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0.0031135,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000249833.1 ENST00000511287.1 chr3:126111876-126113240 2 358 1004 intergenic 1.18 1 0,0,0 0 0,0,0 0 0 0 0 0 3.984 0 0 4.638 0 0 chimp,human,macaque,marmoset,orangutan,panda, antisense antisense A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0.0119935,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0.0031135,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000249833.1 ENST00000505467.1 chr3:126111876-126113431 2 372 1181 intergenic 1.18 1 0,0,0 0 0,0,0 0 0 3.96 0 0 3.984 0 0 4.638 0 0 chimp,human,macaque,marmoset,orangutan,panda, antisense antisense A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0.0119935,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0.0031135,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000244215.1 ENST00000488425.1 chr3:127041150-127109513 5 922 67433 intergenic 7.07 0 0,0,0 0 0,0,0 0 13.0300594664334 0 0 9.17936321978853 0 0 16.5349606275859 0 0 0 chimp,horse,human,macaque,marmoset,orangutan,rabbit, lincRNA lincRNA A549@0,AG04450@0.006957,BJ@0,GM12878@0,H1HESC@0.0026695,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0.0796025,HUVEC@0,K562@0,MCF7@0.013308,NHEK@0,NHLF@0,SKNSHRA@0.01635, 0 0 0 0 ENSG00000239921.2 ENST00000461398.2 chr3:127199533-127255655 7 3032 53078 intergenic 6.40 1 0,0,1 0 0,0,0 0 5.60927314518256 33.456 0 3.79486793021591 5.66 0 6.39952522702438 5.68 0 1 chimp,human,orangutan, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0.0019155,HELAS3@0,HEPG2@0.0035905,HMEC@0,HSMM@0.0049245,HUVEC@0,K562@0,MCF7@0.0869505,NHEK@0.00303467,NHLF@0,SKNSHRA@0.0255625, 0 0 0 0 ENSG00000240562.1 ENST00000479610.1 chr3:127208396-127209630 4 693 535 intergenic 2.33 0 0,0,1 0 0,0,0 0 0 0 0 0 0 0 0 0 0 0 chimp,horse,human,macaque,orangutan, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000239608.1 ENST00000485218.1 chr3:127794653-127797899 2 586 2658 intronic -1.65 0 0,1,0 0 0,0,0 44.2320819112628 31.9638826185102 0 67.7696245733788 59.1674191121144 3.234 80.9283276450512 63.5406320541761 3.245 0 0 chimp,elephant,horse,human,macaque,marmoset,orangutan,panda, antisense antisense A549@0.0046975,AG04450@0.016663,BJ@0.0341835,GM12878@0.0094895,H1HESC@0.019798,HELAS3@0.0419355,HEPG2@0.0642075,HMEC@0,HSMM@0,HUVEC@0.0218945,K562@0.0224725,MCF7@0.077901,NHEK@0.007842,NHLF@0.026385,SKNSHRA@0.234436, 0 0 0 0 ENSG00000242049.1 ENST00000471626.1 chr3:128182437-128191160 3 1795 6924 exonic 4.51 0 0,0,0 0 0,0,0 0 28.6811091854419 29.4 0 22.7957827845176 188.688 0.916434540389972 24.5553148469093 200.081 0 0 chimp,horse,human,macaque,marmoset,orangutan, antisense antisense A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0.0694195,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0.0051655,MCF7@0.0067595,NHEK@0,NHLF@0,SKNSHRA@0.027116, 0 0 0 0 ENSG00000244300.2 ENST00000464242.1 chr3:128208055-128216209 3 1160 6990 intronic 5.09 0 0,1,0 1 0,0,0 70.4413793103448 17.1765379113019 99.26 128.974137931034 59.2942775393419 121.449 105.725862068966 66.4519313304721 150.489 0 0 cat,chimp,cow,dog,elephant,guinea_pig,horse,human,macaque,marmoset,orangutan,panda,rabbit, lincRNA processed_transcript A549@0.21737,AG04450@0.838292,BJ@2.85684,GM12878@0.0082485,H1HESC@0.006894,HELAS3@11.1608,HEPG2@4.17717,HMEC@0.050079,HSMM@0.1903,HUVEC@5.14769,K562@4.14086,MCF7@0.0879085,NHEK@0.00908267,NHLF@0.384957,SKNSHRA@2.28709, 0 0 0 0 ENSG00000244300.2 ENST00000468377.1 chr3:128208075-128221191 2 1576 11538 intronic -0.85 0 1,1,1 1 0,0,0 26.8502538071066 22.4530247876582 107.24 39.8191624365482 54.2980585890102 134.349 24.9124365482234 59.5314612584503 163.829 0 0 chimp,horse,human,macaque,marmoset,orangutan, lincRNA processed_transcript A549@0.21737,AG04450@0.838292,BJ@2.85684,GM12878@0.0082485,H1HESC@0.006894,HELAS3@11.1608,HEPG2@4.17717,HMEC@0.050079,HSMM@0.1903,HUVEC@5.14769,K562@4.14086,MCF7@0.0879085,NHEK@0.00908267,NHLF@0.384957,SKNSHRA@2.28709, 0 0 0 0 ENSG00000244300.2 ENST00000473958.1 chr3:128208100-128208929 2 720 107 intronic 0 0 1,1,1 1 0,0,0 44.9180555555556 0 117.215 64.7638888888889 8.41121495327103 150.474 30.8305555555556 12.1495327102804 180.504 0 0 cat,chimp,cow,dog,elephant,horse,human,marmoset,mouse,orangutan,panda,pig,rabbit, lincRNA processed_transcript A549@0.21737,AG04450@0.838292,BJ@2.85684,GM12878@0.0082485,H1HESC@0.006894,HELAS3@11.1608,HEPG2@4.17717,HMEC@0.050079,HSMM@0.1903,HUVEC@5.14769,K562@4.14086,MCF7@0.0879085,NHEK@0.00908267,NHLF@0.384957,SKNSHRA@2.28709, 0 0 0 0 ENSG00000231305.3 ENST00000498297.1 chr3:128580156-128590383 5 1293 8926 intergenic 35.61 0 0,0,0 0 0,1,0 0 0 0 13.8051044083527 0 0 257.357308584687 110.046829486892 0 0 0 chimp,elephant,human,macaque,orangutan, antisense antisense A549@0.260549,AG04450@0.134165,BJ@0.084509,GM12878@0.196435,H1HESC@0.287987,HELAS3@1.51404,HEPG2@0.378628,HMEC@0.050473,HSMM@0.0257335,HUVEC@0.0346475,K562@0.242109,MCF7@0.627736,NHEK@0.266167,NHLF@0.0146765,SKNSHRA@0.531953, 0 0 0 0 ENSG00000231305.3 ENST00000480931.1 chr3:128580389-128584447 2 698 3358 intergenic 35.61 0 0,1,0 0 0,1,0 0 0 0 0 0 0 353.694842406877 15.2793329362716 0 0 0 cat,chimp,cow,dog,elephant,guinea_pig,horse,human,macaque,marmoset,mouse,opossum,orangutan,panda,pig,platypus,rabbit,rat, antisense antisense A549@0.260549,AG04450@0.134165,BJ@0.084509,GM12878@0.196435,H1HESC@0.287987,HELAS3@1.51404,HEPG2@0.378628,HMEC@0.050473,HSMM@0.0257335,HUVEC@0.0346475,K562@0.242109,MCF7@0.627736,NHEK@0.266167,NHLF@0.0146765,SKNSHRA@0.531953, 0 0 0 0 ENSG00000256880.1 ENST00000539989.1 chr3:128679210-128684200 3 1062 3924 intronic 2.29 0 0,0,0 0 0,0,0 0 0 56.743 0 0 26.047 260.243879472693 76.9508154943935 43.512 0 0 NA lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0.003864,HUVEC@0,K562@0,MCF7@0.0131315,NHEK@0.00168233,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000250856.1 ENST00000502688.1 chr3:128719320-128720388 3 495 569 intergenic 0 0 0,0,0 0 0,0,0 0 0 34.715 0 0 210.116 4.05656565656566 0 295.506 0 0 chimp,dog,horse,human,macaque,marmoset,orangutan, antisense antisense A549@0,AG04450@0.0063105,BJ@0,GM12878@0,H1HESC@0.007435,HELAS3@0,HEPG2@0.012044,HMEC@0,HSMM@0,HUVEC@0.015686,K562@0,MCF7@0.0242365,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000250856.1 ENST00000503572.1 chr3:128719477-128720388 2 536 373 intergenic -3.89 0 0,0,0 0 0,0,0 0 0 34.715 0 0 210.116 3.74626865671642 0 295.506 0 0 chimp,horse,human,macaque,marmoset,orangutan, antisense antisense A549@0,AG04450@0.0063105,BJ@0,GM12878@0,H1HESC@0.007435,HELAS3@0,HEPG2@0.012044,HMEC@0,HSMM@0,HUVEC@0.015686,K562@0,MCF7@0.0242365,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000206417.4 ENST00000511998.1 chr3:129034235-129037154 4 913 2000 exonic 1.10 0 0,1,0 0 0,1,0 22.512595837897 41.491 55.682 80.0602409638554 116.7925 82.99 121.179627601314 140.3165 132.217 0 0 cat,chimp,human,macaque,marmoset,orangutan, antisense antisense A549@0.070414,AG04450@0.10323,BJ@0.178424,GM12878@0.0241885,H1HESC@0.437662,HELAS3@0.307876,HEPG2@0.235779,HMEC@0.117334,HSMM@0.0879215,HUVEC@0.245608,K562@0.083537,MCF7@0.332036,NHEK@0.06372,NHLF@0.0283635,SKNSHRA@0.313788, 0 0 0 0 ENSG00000206417.4 ENST00000433902.2 chr3:129034363-129043390 2 484 8541 exonic -1.26 0 0,1,0 0 0,1,0 42.4669421487603 9.71572415408032 55.682 118.23347107438 32.513288842056 82.99 138.595041322314 53.9524645826016 152.185 1 1 chimp,human,macaque,marmoset,orangutan, antisense antisense A549@0.070414,AG04450@0.10323,BJ@0.178424,GM12878@0.0241885,H1HESC@0.437662,HELAS3@0.307876,HEPG2@0.235779,HMEC@0.117334,HSMM@0.0879215,HUVEC@0.245608,K562@0.083537,MCF7@0.332036,NHEK@0.06372,NHLF@0.0283635,SKNSHRA@0.313788, 0 0 0 0 ENSG00000206417.4 ENST00000383461.2 chr3:129036949-129045068 4 2596 5517 intergenic 5.58 0 0,0,0 0 0,1,0 0 0 0 0 5.02301975711437 0 22.1633281972265 28.2171470001813 0 0 1 chimp,human,orangutan, antisense antisense A549@0.070414,AG04450@0.10323,BJ@0.178424,GM12878@0.0241885,H1HESC@0.437662,HELAS3@0.307876,HEPG2@0.235779,HMEC@0.117334,HSMM@0.0879215,HUVEC@0.245608,K562@0.083537,MCF7@0.332036,NHEK@0.06372,NHLF@0.0283635,SKNSHRA@0.313788, 0 0 0 0 ENSG00000206417.4 ENST00000537780.1 chr3:129037037-129042342 3 359 4942 intergenic 4.08 0 0,0,0 0 0,1,0 0 0 0 0 3.95629299878592 0 0 17.1869688385269 0 0 1 chimp,human,macaque, antisense antisense A549@0.070414,AG04450@0.10323,BJ@0.178424,GM12878@0.0241885,H1HESC@0.437662,HELAS3@0.307876,HEPG2@0.235779,HMEC@0.117334,HSMM@0.0879215,HUVEC@0.245608,K562@0.083537,MCF7@0.332036,NHEK@0.06372,NHLF@0.0283635,SKNSHRA@0.313788, 0 0 0 0 ENSG00000206417.4 ENST00000502789.2 chr3:129037079-129043412 5 917 5408 intergenic 5.00 0 0,0,0 0 0,1,0 0 0 0 0 5.12426035502959 0 51.0490730643402 20.0377218934911 0 0 0 chimp,elephant,human,macaque,marmoset,orangutan,pig,rat, antisense antisense A549@0.070414,AG04450@0.10323,BJ@0.178424,GM12878@0.0241885,H1HESC@0.437662,HELAS3@0.307876,HEPG2@0.235779,HMEC@0.117334,HSMM@0.0879215,HUVEC@0.245608,K562@0.083537,MCF7@0.332036,NHEK@0.06372,NHLF@0.0283635,SKNSHRA@0.313788, 0 0 0 0 ENSG00000250643.1 ENST00000509201.1 chr3:129672948-129688137 4 462 14721 intergenic 0.77 0 0,0,0 0 0,0,0 0 4.63134297941716 0 0 4.46661232253244 0 6.14718614718615 5.20637184973847 0 0 0 chimp,cow,dog,human,macaque,marmoset,orangutan, antisense antisense A549@0.0144745,AG04450@0,BJ@0.060748,GM12878@0,H1HESC@0,HELAS3@0.0089575,HEPG2@0,HMEC@0,HSMM@0.0318605,HUVEC@0.0052175,K562@0,MCF7@0.353067,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000248243.1 ENST00000514010.1 chr3:129808276-129813147 4 709 4156 intergenic -3.02 0 0,0,0 0 0,0,0 0 0 0 0 9.86645813282002 9.72 7.19746121297602 32.7601058710298 48.342 0 0 chimp,horse,human,orangutan, lincRNA lincRNA A549@0.103132,AG04450@0,BJ@0.032406,GM12878@0.445895,H1HESC@0.12305,HELAS3@0.0090235,HEPG2@0.074772,HMEC@0.051685,HSMM@0.054006,HUVEC@0.0109945,K562@0.095385,MCF7@0.514575,NHEK@0.0425067,NHLF@0.019035,SKNSHRA@0.0424565, 0 0 0 0 ENSG00000249846.1 ENST00000514145.1 chr3:129831393-129838017 3 566 6054 intergenic -1.90 0 0,1,0 0 0,0,0 0 0 0 0 35.7494218698381 0 0 42.9033696729435 145.049 1 1 chimp,human,macaque,marmoset,orangutan, processed_transcript processed_transcript A549@0.014776,AG04450@0.22016,BJ@0.372731,GM12878@0.0591065,H1HESC@0.397939,HELAS3@0.0320655,HEPG2@0.145264,HMEC@0.025834,HSMM@0.163644,HUVEC@0.014116,K562@0.212515,MCF7@0.147255,NHEK@0.031347,NHLF@0.106395,SKNSHRA@0.234141, 0 0 0 0 ENSG00000249846.1 ENST00000507856.1 chr3:129831393-129838273 2 567 6311 intergenic 0 0 0,1,1 0 0,0,0 0 0 0 0 34.2936143241959 0 0 41.156235144985 145.049 0 0 chimp,dog,elephant,human,macaque,marmoset,orangutan, processed_transcript processed_transcript A549@0.014776,AG04450@0.22016,BJ@0.372731,GM12878@0.0591065,H1HESC@0.397939,HELAS3@0.0320655,HEPG2@0.145264,HMEC@0.025834,HSMM@0.163644,HUVEC@0.014116,K562@0.212515,MCF7@0.147255,NHEK@0.031347,NHLF@0.106395,SKNSHRA@0.234141, 0 0 0 0 ENSG00000249846.1 ENST00000504808.1 chr3:129831495-129838359 3 542 6318 intergenic -1.45 0 0,0,0 0 0,0,0 0 0 0 0 34.25561886673 0 0 41.1106362773029 145.049 1 1 chimp,human,macaque,marmoset,orangutan, processed_transcript processed_transcript A549@0.014776,AG04450@0.22016,BJ@0.372731,GM12878@0.0591065,H1HESC@0.397939,HELAS3@0.0320655,HEPG2@0.145264,HMEC@0.025834,HSMM@0.163644,HUVEC@0.014116,K562@0.212515,MCF7@0.147255,NHEK@0.031347,NHLF@0.106395,SKNSHRA@0.234141, 0 0 0 0 ENSG00000250592.1 ENST00000504737.1 chr3:130618258-130648820 2 338 30222 intronic -0.77 0 0,0,0 0 0,0,0 0 1.70683607967706 45.577 0 4.75461584276355 98.517 0 22.5027794322017 93.868 0 0 cat,cow,elephant,horse,human,macaque,marmoset,orangutan,pig,rabbit, processed_transcript processed_transcript A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000250129.1 ENST00000506476.1 chr3:130772161-130791183 3 588 18430 intronic -2.69 0 0,1,0 0 0,0,0 0 1.45024416711883 20.832 6.50340136054422 4.15214324470971 10.218 19.921768707483 9.03613673358654 9.275 0 0 chimp,elephant,horse,human,macaque,marmoset,mouse,orangutan,pig,rabbit,rat, antisense antisense A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0.054908,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000250129.1 ENST00000511339.1 chr3:130772204-130791179 3 664 18307 intronic -0.41 0 0,1,0 0 0,0,0 0 1.45998798273884 19.84 5.75903614457831 4.18004042169662 9.262 8.94728915662651 9.09684820014202 8.745 0 0 cat,chimp,dog,horse,human,macaque,marmoset,orangutan,panda,rabbit, antisense antisense A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0.054908,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000250129.1 ENST00000513940.1 chr3:130772204-130791179 3 668 18303 intronic -2.69 0 0,1,0 0 0,0,0 0 1.4603070534885 19.84 5.72455089820359 4.18095394197672 9.262 8.8937125748503 9.09883625635142 8.745 0 0 cat,chimp,dog,horse,human,macaque,marmoset,orangutan,panda,rabbit, antisense antisense A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0.054908,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000250608.1 ENST00000502521.1 chr3:131043936-131100319 4 1974 54403 intronic -0.92 0 0,1,1 1 0,0,0 0 2.81348455048435 121.347 1.45288753799392 5.34409867102917 142.243 1.47720364741641 10.7274047387093 148.826 0 0 chimp,elephant,human,macaque,marmoset,orangutan, antisense antisense A549@0.025268,AG04450@0.0048535,BJ@0.006935,GM12878@0.008538,H1HESC@0.175566,HELAS3@0,HEPG2@0.008547,HMEC@0,HSMM@0.0020805,HUVEC@0.001229,K562@0.159417,MCF7@0.0080745,NHEK@0.00684267,NHLF@0.0009865,SKNSHRA@0.010134, 0 0 0 0 ENSG00000250608.1 ENST00000511699.1 chr3:131046407-131049712 2 2187 1116 intronic 4.34 0 0,1,1 0 0,0,0 0 0 0 0 0 0 1 0 0 0 0 chimp,dog,elephant,guinea_pig,horse,human,macaque,orangutan, antisense retained_intron A549@0.025268,AG04450@0.0048535,BJ@0.006935,GM12878@0.008538,H1HESC@0.175566,HELAS3@0,HEPG2@0.008547,HMEC@0,HSMM@0.0020805,HUVEC@0.001229,K562@0.159417,MCF7@0.0080745,NHEK@0.00684267,NHLF@0.0009865,SKNSHRA@0.010134, 0 0 0 0 ENSG00000250608.1 ENST00000513905.1 chr3:131047217-131080455 3 257 32977 intronic 0 0 0,1,0 1 0,0,0 0 4.64147739333475 0 0 3.97986475422264 51.36 0 10.7883676501804 93.45 1 1 chimp,human,macaque,marmoset,orangutan, antisense antisense A549@0.025268,AG04450@0.0048535,BJ@0.006935,GM12878@0.008538,H1HESC@0.175566,HELAS3@0,HEPG2@0.008547,HMEC@0,HSMM@0.0020805,HUVEC@0.001229,K562@0.159417,MCF7@0.0080745,NHEK@0.00684267,NHLF@0.0009865,SKNSHRA@0.010134, 0 0 0 0 ENSG00000250608.1 ENST00000441345.2 chr3:131048932-131080441 2 810 30697 intronic 3.02 0 0,1,0 1 0,0,0 0 4.98622015180637 0 0 4.27546665797961 51.36 0 11.5184219956348 93.45 0 0 chimp,human,macaque,marmoset,orangutan,rabbit, antisense retained_intron A549@0.025268,AG04450@0.0048535,BJ@0.006935,GM12878@0.008538,H1HESC@0.175566,HELAS3@0,HEPG2@0.008547,HMEC@0,HSMM@0.0020805,HUVEC@0.001229,K562@0.159417,MCF7@0.0080745,NHEK@0.00684267,NHLF@0.0009865,SKNSHRA@0.010134, 0 0 0 0 ENSG00000248468.1 ENST00000503006.1 chr3:131236675-131239724 2 573 2474 intergenic -3.65 0 0,0,1 0 0,0,0 0 0 0 0 57.1075181891673 0 0 58.8488278092158 0 0 0 cat,chimp,dog,guinea_pig,horse,human,macaque,marmoset,orangutan,panda, antisense antisense A549@0.040147,AG04450@0.0828345,BJ@0.0252515,GM12878@0.334648,H1HESC@0.079299,HELAS3@0.135768,HEPG2@0.0075675,HMEC@0,HSMM@0.0742705,HUVEC@0.170914,K562@0.092641,MCF7@0.006993,NHEK@0.0654857,NHLF@0.0337455,SKNSHRA@0, 0 0 0 0 ENSG00000240962.1 ENST00000489343.1 chr3:132440594-132469621 5 2952 26067 exonic 39.31 1 0,0,1 0 0,0,0 0 2.11244101737829 0 55.9468157181572 2.55107990946407 0 73.554539295393 3.49940537844785 0 0 0 chimp,human,macaque,orangutan, antisense antisense A549@0.0028085,AG04450@0.0101475,BJ@0.0126935,GM12878@0.0007925,H1HESC@0.0008565,HELAS3@0.0038205,HEPG2@0.008719,HMEC@0.005506,HSMM@0.028884,HUVEC@0.0064375,K562@0.002733,MCF7@0.0041245,NHEK@0.00310233,NHLF@0.0076995,SKNSHRA@0.0025295, 58 2 0 0 ENSG00000248724.1 ENST00000503298.1 chr3:132440594-132469636 5 2967 26067 exonic 39.31 1 0,0,1 0 0,0,0 0 2.11244101737829 0 55.6639703404112 2.55107990946407 0 73.1826761038085 3.49940537844785 0 0 1 chimp,human,macaque,orangutan, processed_transcript non_coding A549@0,AG04450@0.0016955,BJ@0.0132345,GM12878@0,H1HESC@0.0404145,HELAS3@0,HEPG2@0,HMEC@0.003305,HSMM@0.182915,HUVEC@0.0032605,K562@0.0019595,MCF7@0.00166,NHEK@0,NHLF@0.044684,SKNSHRA@0.0042635, 58 2 0 0 ENSG00000240962.1 ENST00000463373.1 chr3:132441186-132546850 9 1742 103906 exonic 4.55 0 0,1,0 0 0,0,0 0 2.67394568167382 0 1.70838117106774 5.95422785979636 165.155 5.54994259471871 7.02104787019037 212.04 0 0 chimp,human,macaque,marmoset,orangutan, antisense antisense A549@0.0028085,AG04450@0.0101475,BJ@0.0126935,GM12878@0.0007925,H1HESC@0.0008565,HELAS3@0.0038205,HEPG2@0.008719,HMEC@0.005506,HSMM@0.028884,HUVEC@0.0064375,K562@0.002733,MCF7@0.0041245,NHEK@0.00310233,NHLF@0.0076995,SKNSHRA@0.0025295, 0 0 0 0 ENSG00000248724.1 ENST00000504440.1 chr3:132441186-132593067 11 2496 149365 exonic 4.55 1 0,1,0 0 0,0,0 0 3.6124861915442 0 1.19230769230769 6.68374786596592 165.155 3.87339743589744 8.88240216918288 212.04 0 0 chimp,horse,human,macaque,marmoset,orangutan, processed_transcript non_coding A549@0,AG04450@0.0016955,BJ@0.0132345,GM12878@0,H1HESC@0.0404145,HELAS3@0,HEPG2@0,HMEC@0.003305,HSMM@0.182915,HUVEC@0.0032605,K562@0.0019595,MCF7@0.00166,NHEK@0,NHLF@0.044684,SKNSHRA@0.0042635, 0 0 0 0 ENSG00000249725.1 ENST00000505557.1 chr3:132733848-132755896 2 382 21664 intergenic -3.11 0 0,0,0 0 0,0,0 0 6.85764401772526 0 0 8.7140417282127 6.322 2.54450261780105 12.7099335302807 3.468 0 0 chimp,elephant,guinea_pig,human,marmoset,orangutan,rabbit, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0.0108045,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0.0188315, 0 0 0 0 ENSG00000251011.1 ENST00000504993.1 chr3:132964950-132975892 4 701 10235 intronic -2.67 0 0,0,0 0 0,0,0 21.7389443651926 11.9556424035173 12.985 10.5492154065621 12.1557401074744 87.81 0 15.1778212017587 97.666 0 0 cat,chimp,cow,dog,guinea_pig,horse,human,macaque,marmoset,orangutan,panda,pig,rabbit, antisense antisense A549@0,AG04450@0,BJ@0,GM12878@0.0052695,H1HESC@0.003648,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0.000848,HUVEC@0,K562@0,MCF7@0.002852,NHEK@0.0119723,NHLF@0,SKNSHRA@0.215282, 0 0 0 0 ENSG00000251011.1 ENST00000505721.1 chr3:132965270-132976032 3 2424 8334 intronic -3.36 0 0,0,0 0 0,0,0 19.8865511551155 10.7271418286537 12.985 20.4026402640264 10.8002159827214 79.891 18.1658415841584 14.4455243580514 88.271 0 1 chimp,human,macaque,orangutan, antisense antisense A549@0,AG04450@0,BJ@0,GM12878@0.0052695,H1HESC@0.003648,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0.000848,HUVEC@0,K562@0,MCF7@0.002852,NHEK@0.0119723,NHLF@0,SKNSHRA@0.215282, 0 0 0 0 ENSG00000249993.1 ENST00000515542.1 chr3:133148113-133174620 5 889 25610 intronic 2.02 0 0,0,1 0 0,0,0 0 12.485903943772 0 0 11.3974228816868 0 0 14.835103475205 0 0 0 chimp,horse,human,macaque,marmoset,orangutan, antisense antisense A549@0,AG04450@0,BJ@0,GM12878@0.20923,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0.018042,NHEK@0.00147667,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000243832.1 ENST00000483245.1 chr3:133774100-133776492 2 638 1752 intergenic 6.27 0 0,0,0 0 0,0,0 0 0 0 0 0 10.235 0 22.2294520547945 8.211 0 0 cat,chimp,cow,elephant,horse,human,macaque,marmoset,orangutan,rabbit, lincRNA lincRNA A549@0,AG04450@0,BJ@0.0167715,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0.006283,NHEK@0,NHLF@0,SKNSHRA@0.0106535, 0 0 0 0 ENSG00000244351.1 ENST00000484106.1 chr3:133784147-133794057 3 820 9086 intergenic 0.45 0 0,0,1 0 0,0,0 0 5.79661016949153 0 0.621951219512195 12.3642967202289 0 0.646341463414634 13.2447721769756 2.43 0 0 cat,chimp,human,macaque,marmoset,orangutan, processed_transcript processed_transcript A549@0,AG04450@0.0038325,BJ@0.0055715,GM12878@0,H1HESC@0,HELAS3@0.403394,HEPG2@0.054716,HMEC@0,HSMM@0.0150545,HUVEC@0,K562@0,MCF7@0.008628,NHEK@0,NHLF@0,SKNSHRA@0.0047195, 0 0 0 0 ENSG00000240006.1 ENST00000482019.1 chr3:134032418-134040013 2 292 7301 intergenic 2.96 0 0,0,1 0 0,0,0 3.01369863013699 28.8256403232434 9.405 50.972602739726 19.1412135323928 22.583 51.1369863013699 19.272017531845 22.34 0 0 cat,chimp,cow,dog,elephant,guinea_pig,horse,human,macaque,marmoset,mouse,orangutan,panda,pig,rabbit,rat, lincRNA lincRNA A549@0.007383,AG04450@0.0240315,BJ@0.038762,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0.026663,K562@0,MCF7@0.278444,NHEK@0.0790327,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000240086.1 ENST00000466206.1 chr3:135074909-135158671 4 558 83198 intergenic -3.07 0 0,0,0 0 0,0,0 31.4408602150538 13.8301521671194 0 0 16.9943147671819 4.464 0 18.5030289189644 4.662 0 0 cat,chimp,cow,dog,elephant,guinea_pig,horse,human,macaque,marmoset,orangutan,panda, lincRNA lincRNA A549@0.077233,AG04450@0.0167935,BJ@0.005954,GM12878@0,H1HESC@0.39517,HELAS3@0.0081965,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@1.33597,NHEK@0,NHLF@0,SKNSHRA@0.022146, 0 0 0 0 ENSG00000240086.1 ENST00000459861.1 chr3:135092637-135158664 4 823 65198 intergenic -3.07 0 0,0,1 0 0,0,0 0 7.81806190373938 0 0 10.8483389061014 4.464 0 12.0557532439645 4.662 0 0 chimp,horse,human,macaque,marmoset,orangutan,panda, lincRNA lincRNA A549@0.077233,AG04450@0.0167935,BJ@0.005954,GM12878@0,H1HESC@0.39517,HELAS3@0.0081965,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@1.33597,NHEK@0,NHLF@0,SKNSHRA@0.022146, 0 0 0 0 ENSG00000240086.1 ENST00000473001.1 chr3:135097888-135158730 3 579 60259 intergenic -2.32 0 0,0,1 0 0,0,0 0 6.55830664299109 0 0 8.3981645895219 4.464 0 9.55643140443751 4.662 0 0 chimp,elephant,human,macaque,marmoset,orangutan, lincRNA retained_intron A549@0.077233,AG04450@0.0167935,BJ@0.005954,GM12878@0,H1HESC@0.39517,HELAS3@0.0081965,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@1.33597,NHEK@0,NHLF@0,SKNSHRA@0.022146, 0 0 0 0 ENSG00000239213.1 ENST00000461864.1 chr3:136560568-136580879 3 1191 19116 intronic -3.91 0 0,1,0 1 0,0,0 72.7103274559194 50.8889412010881 47.608 7.13685978169605 50.9219501987864 82.302 9.02854743912678 52.1905733417033 84.358 0 0 dog,elephant,human,macaque,orangutan,panda,rabbit, antisense antisense A549@0.30872,AG04450@0.512134,BJ@0.402462,GM12878@1.70963,H1HESC@1.83963,HELAS3@0.943834,HEPG2@0.537881,HMEC@1.4069,HSMM@0.377081,HUVEC@0.407712,K562@1.75222,MCF7@1.53325,NHEK@0.775613,NHLF@0.760831,SKNSHRA@0.741082, 0 0 0 0 ENSG00000239213.1 ENST00000474250.1 chr3:136561033-136580891 4 823 19029 intronic -6.47 1 1,1,1 1 0,0,0 8.92345078979344 50.7213726417573 47.608 10.1142162818955 51.1547637815965 80.566 10.3985419198056 52.4291870303221 86.357 0 0 horse,human,macaque,orangutan,panda, antisense antisense A549@0.30872,AG04450@0.512134,BJ@0.402462,GM12878@1.70963,H1HESC@1.83963,HELAS3@0.943834,HEPG2@0.537881,HMEC@1.4069,HSMM@0.377081,HUVEC@0.407712,K562@1.75222,MCF7@1.53325,NHEK@0.775613,NHLF@0.760831,SKNSHRA@0.741082, 0 0 0 0 ENSG00000239213.1 ENST00000470236.1 chr3:136561299-136580896 3 609 18984 intronic 2.22 0 0,1,0 1 0,0,0 0 51.2427833965445 47.608 13.6683087027915 51.27602191319 80.566 14.0525451559934 52.5534660766962 87.922 0 0 chimp,cow,dog,guinea_pig,horse,human,macaque,marmoset,orangutan,panda, antisense antisense A549@0.30872,AG04450@0.512134,BJ@0.402462,GM12878@1.70963,H1HESC@1.83963,HELAS3@0.943834,HEPG2@0.537881,HMEC@1.4069,HSMM@0.377081,HUVEC@0.407712,K562@1.75222,MCF7@1.53325,NHEK@0.775613,NHLF@0.760831,SKNSHRA@0.741082, 0 0 0 0 ENSG00000249407.1 ENST00000462176.2 chr3:136677967-136701038 2 560 22509 exonic 2.18 0 0,1,1 0 0,0,0 3.54285714285714 1.23399529077258 31.992 27.9785714285714 2.81696210404727 39.734 28.5857142857143 3.4549735661291 47.711 0 0 cat,chimp,cow,dog,horse,human,macaque,marmoset,orangutan,panda, antisense antisense A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0.009503,K562@0,MCF7@0,NHEK@0.00704733,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000239513.1 ENST00000478772.1 chr3:137490791-137499720 5 1283 7638 intergenic 0.44 1 0,0,0 0 0,0,0 9.50038971161341 62.1479444880859 193.971 2.02182385035074 64.3098978790259 291.564 2.98129384255651 80.6255564283844 300.377 0 0 chimp,elephant,horse,human,macaque,marmoset,orangutan,panda, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0.0130705,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000239513.1 ENST00000465283.1 chr3:137493383-137496438 4 621 2428 intergenic -1.06 0 0,0,0 0 0,0,0 0 11.8653212520593 0 4.17713365539452 7.67751235584844 9.371 6.15942028985507 8.25123558484349 12.118 0 0 cat,chimp,cow,dog,elephant,guinea_pig,horse,human,macaque,marmoset,orangutan,panda,pig, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0.0130705,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000239513.1 ENST00000471091.1 chr3:137493386-137496438 4 429 2617 intergenic -1.06 0 0,0,0 0 0,0,0 0 11.0084065724112 0 6.04662004662005 7.12304165074513 9.371 8.91608391608391 7.65533053114253 12.118 0 0 cat,chimp,cow,dog,elephant,horse,human,macaque,marmoset,orangutan,pig,rat, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0.0130705,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000239513.1 ENST00000469216.1 chr3:137493834-137496438 3 643 1957 intergenic -1.06 0 0,1,0 0 0,0,0 0 14.7210015329586 0 3.02954898911353 7.21461420541645 5.491 1.56143079315708 7.96934082779765 10.492 0 0 cat,chimp,cow,dog,elephant,horse,human,macaque,marmoset,orangutan,panda,pig, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0.0130705,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000244578.1 ENST00000495287.1 chr3:138654031-138662862 3 3535 5292 intergenic 6.42 0 1,1,1 0 0,0,0 5.67920792079208 17.5294784580499 40.876 9.398585572843 18.0079365079365 78.815 9.16379066478076 19.6600529100529 83.775 0 0 chimp,human,macaque,marmoset,orangutan, lincRNA processed_transcript A549@0.052302,AG04450@0.0024565,BJ@0.002403,GM12878@0,H1HESC@0.026509,HELAS3@0.134378,HEPG2@0.0774625,HMEC@0.001157,HSMM@0,HUVEC@0.0106225,K562@0.35348,MCF7@0,NHEK@0.000360667,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000244578.1 ENST00000483650.1 chr3:138656750-138662845 3 862 5229 intergenic 5.54 0 0,1,1 0 0,0,0 23.2900232018561 17.740676993689 40.876 25.8236658932715 18.2248995983936 77.03 25.7412993039443 19.8969210174029 81.71 0 0 cat,chimp,cow,dog,guinea_pig,human,marmoset,orangutan, lincRNA processed_transcript A549@0.052302,AG04450@0.0024565,BJ@0.002403,GM12878@0,H1HESC@0.026509,HELAS3@0.134378,HEPG2@0.0774625,HMEC@0.001157,HSMM@0,HUVEC@0.0106225,K562@0.35348,MCF7@0,NHEK@0.000360667,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000244578.1 ENST00000477059.1 chr3:138659270-138661420 2 481 1667 intergenic 3.47 0 0,1,1 0 0,0,0 0 0 0 0 13.8206358728254 1.38 0 15.8272345530894 9.492 0 0 chimp,cow,dog,horse,human,macaque,marmoset,orangutan,panda, lincRNA processed_transcript A549@0.052302,AG04450@0.0024565,BJ@0.002403,GM12878@0,H1HESC@0.026509,HELAS3@0.134378,HEPG2@0.0774625,HMEC@0.001157,HSMM@0,HUVEC@0.0106225,K562@0.35348,MCF7@0,NHEK@0.000360667,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000232416.2 ENST00000418282.1 chr3:138823027-138844009 3 3515 17463 intronic 11.35 1 0,1,0 0 0,0,0 0 19.5444654412186 33.667 6.7402560455192 25.8057607513028 56.602 140.803982930299 26.5415449808166 63.298 0 0 chimp,horse,human,macaque,marmoset,orangutan,panda, processed_transcript processed_transcript A549@0.000437,AG04450@0,BJ@0,GM12878@0,H1HESC@0.0040745,HELAS3@0.0063885,HEPG2@0.00401,HMEC@0,HSMM@0.002153,HUVEC@0,K562@0.000909,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000248932.1 ENST00000504670.1 chr3:139108657-139163205 3 599 53945 intergenic -5.23 0 0,1,0 1 0,0,0 0 10.4398739456854 0 0 11.9983872462693 27.246 0 13.6742608212068 30.195 0 1 chimp,human,macaque,orangutan, processed_transcript processed_transcript A549@2.14649,AG04450@0.832076,BJ@0.837711,GM12878@1.03171,H1HESC@2.22422,HELAS3@1.2466,HEPG2@0.987939,HMEC@0.307665,HSMM@0.932863,HUVEC@0.162029,K562@1.5132,MCF7@1.15664,NHEK@0.48375,NHLF@0.39088,SKNSHRA@3.99747, 0 0 0 0 ENSG00000248932.1 ENST00000507362.1 chr3:139108660-139163167 3 548 53955 intergenic -5.23 0 0,1,0 1 0,0,0 0 10.4379390232601 0 0 11.996163469558 27.246 0 13.6717264386989 30.195 0 1 chimp,human,macaque,orangutan, processed_transcript processed_transcript A549@2.14649,AG04450@0.832076,BJ@0.837711,GM12878@1.03171,H1HESC@2.22422,HELAS3@1.2466,HEPG2@0.987939,HMEC@0.307665,HSMM@0.932863,HUVEC@0.162029,K562@1.5132,MCF7@1.15664,NHEK@0.48375,NHLF@0.39088,SKNSHRA@3.99747, 0 0 0 0 ENSG00000248932.1 ENST00000512622.1 chr3:139108672-139142235 2 480 33081 intergenic -5.11 0 0,1,0 1 0,0,0 0 11.2208518484931 0 0 12.2969680481243 27.246 0 13.769172636861 30.195 0 0 chimp,horse,human,marmoset,orangutan, processed_transcript retained_intron A549@2.14649,AG04450@0.832076,BJ@0.837711,GM12878@1.03171,H1HESC@2.22422,HELAS3@1.2466,HEPG2@0.987939,HMEC@0.307665,HSMM@0.932863,HUVEC@0.162029,K562@1.5132,MCF7@1.15664,NHEK@0.48375,NHLF@0.39088,SKNSHRA@3.99747, 0 0 0 0 ENSG00000248932.1 ENST00000510068.1 chr3:139108680-139171082 4 565 61831 intergenic -3.42 0 0,1,0 1 0,0,0 0 10.4931021655804 0 0 11.4249486503534 27.246 0 13.1469974608206 30.195 0 0 cat,chimp,cow,dog,elephant,horse,human,macaque,marmoset,orangutan, processed_transcript processed_transcript A549@2.14649,AG04450@0.832076,BJ@0.837711,GM12878@1.03171,H1HESC@2.22422,HELAS3@1.2466,HEPG2@0.987939,HMEC@0.307665,HSMM@0.932863,HUVEC@0.162029,K562@1.5132,MCF7@1.15664,NHEK@0.48375,NHLF@0.39088,SKNSHRA@3.99747, 0 0 0 0 ENSG00000248932.1 ENST00000515247.1 chr3:139108682-139302161 5 562 192909 intronic -4.01 0 0,1,0 1 0,0,0 117.224199288256 12.3840619152035 0 169.715302491103 12.2593969177177 27.246 144.524911032028 19.7655060157898 30.195 0 0 cat,chimp,cow,dog,elephant,guinea_pig,horse,human,macaque,marmoset,opossum,orangutan,panda,pig,rabbit,rat, processed_transcript processed_transcript A549@2.14649,AG04450@0.832076,BJ@0.837711,GM12878@1.03171,H1HESC@2.22422,HELAS3@1.2466,HEPG2@0.987939,HMEC@0.307665,HSMM@0.932863,HUVEC@0.162029,K562@1.5132,MCF7@1.15664,NHEK@0.48375,NHLF@0.39088,SKNSHRA@3.99747, 0 0 0 0 ENSG00000248932.1 ENST00000514729.1 chr3:139108718-139141891 2 586 32585 intergenic 0 0 1,1,1 1 0,0,0 0 11.39165260089 0 0 12.4841491483812 27.246 0 13.9787632346172 30.195 0 0 cat,chimp,human,macaque,orangutan, processed_transcript processed_transcript A549@2.14649,AG04450@0.832076,BJ@0.837711,GM12878@1.03171,H1HESC@2.22422,HELAS3@1.2466,HEPG2@0.987939,HMEC@0.307665,HSMM@0.932863,HUVEC@0.162029,K562@1.5132,MCF7@1.15664,NHEK@0.48375,NHLF@0.39088,SKNSHRA@3.99747, 0 0 0 0 ENSG00000248790.1 ENST00000512398.1 chr3:139185272-139185637 2 271 92 intronic 0 0 0,1,0 0 0,0,0 0 0 0 0 0 0 0 0 1.175 0 0 cat,chimp,dog,horse,human,macaque,marmoset,orangutan,panda,pig, antisense antisense A549@0.01803,AG04450@0,BJ@0,GM12878@0.0042985,H1HESC@0.00664,HELAS3@0.0233955,HEPG2@0.010657,HMEC@0,HSMM@0,HUVEC@0,K562@0.002922,MCF7@0,NHEK@0.0676093,NHLF@0,SKNSHRA@0.02927, 0 0 0 0 ENSG00000248932.1 ENST00000381790.3 chr3:139258758-139302096 3 491 42843 intronic -2.11 0 0,0,0 0 0,0,0 86.5173116089613 15.0604066008449 58.692 132.668024439919 12.1894825292346 87.112 94.3849287169043 15.5618420745513 579.817 0 0 chimp,guinea_pig,human,macaque,marmoset,mouse,orangutan,rat, processed_transcript processed_transcript A549@2.14649,AG04450@0.832076,BJ@0.837711,GM12878@1.03171,H1HESC@2.22422,HELAS3@1.2466,HEPG2@0.987939,HMEC@0.307665,HSMM@0.932863,HUVEC@0.162029,K562@1.5132,MCF7@1.15664,NHEK@0.48375,NHLF@0.39088,SKNSHRA@3.99747, 0 0 0 0 ENSG00000250543.1 ENST00000506934.1 chr3:139407245-139408184 2 605 332 intergenic -10.13 0 0,0,0 0 0,0,0 91.4842975206612 0 124.682 113.586776859504 0 185.067 128.867768595041 0 180.315 0 1 chimp,human,macaque,marmoset, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0.0047945,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000251471.1 ENST00000504735.1 chr3:139556062-139578736 3 536 22134 intergenic 2.55 0 0,0,0 0 0,0,0 16.3059701492537 10.1386102828228 124.658 0 8.02457757296467 52.943 0 10.1735339297009 55.527 0 0 chimp,horse,human,macaque,marmoset,orangutan, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0.011864,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000249290.1 ENST00000502712.1 chr3:140168277-140173573 5 789 4499 intronic 3.38 0 0,0,1 0 0,0,0 0 4.14758835296733 9.2 0 13.8157368304068 6.552 0 18.2184929984441 6.672 1 1 chimp,human,macaque,marmoset,orangutan, antisense antisense A549@0,AG04450@0,BJ@0,GM12878@0.002952,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0.0025895,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000249290.1 ENST00000509191.1 chr3:140168352-140173595 6 792 4441 intronic 3.38 0 0,0,1 0 0,0,0 0 4.20175636117991 17.296 0 13.9961720333258 8.533 0 18.4564287322675 8.66 0 0 chimp,horse,human,macaque,marmoset,orangutan, antisense antisense A549@0,AG04450@0,BJ@0,GM12878@0.002952,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0.0025895,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000249290.1 ENST00000503357.1 chr3:140171370-140179193 4 474 7343 intronic -1.57 0 0,0,0 0 0,0,0 0 25.8127468337192 0 0 17.6746561350946 2.232 0 19.3497208225521 2.331 0 0 cat,chimp,horse,human,macaque,marmoset,orangutan, antisense antisense A549@0,AG04450@0,BJ@0,GM12878@0.002952,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0.0025895,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000251058.1 ENST00000483759.2 chr3:140179842-140181667 2 480 1343 intronic -1.24 0 0,0,0 0 0,0,0 0 0 0 0 0 0 0 3.79970215934475 0 0 0 chimp,dog,human,macaque,marmoset,orangutan,rabbit, antisense antisense A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0.024152,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000250433.1 ENST00000513309.1 chr3:140224453-140227631 2 2691 485 intronic 2.97 1 0,0,0 0 0,0,0 5.47751765143069 0 0 21.7625418060201 0 0 26.6231884057971 0 4.86 0 0 chimp,guinea_pig,human,macaque,marmoset,orangutan, antisense antisense A549@0,AG04450@0.001749,BJ@0,GM12878@0.0276585,H1HESC@0.0337445,HELAS3@0,HEPG2@0.0015825,HMEC@0,HSMM@0.055898,HUVEC@0,K562@0,MCF7@0.001493,NHEK@0.00385267,NHLF@0.001433,SKNSHRA@0.013048, 0 0 0 0 ENSG00000248773.1 ENST00000513802.1 chr3:140691586-140692097 2 391 118 intronic -7.03 0 0,1,1 0 0,0,0 0 0 0 0 0 0 6.83631713554987 0 0 0 0 cat,chimp,cow,guinea_pig,horse,human,macaque,marmoset,orangutan,panda, sense_intronic sense_intronic A549@0.0174025,AG04450@0.040229,BJ@0.0091705,GM12878@0.094429,H1HESC@0.013828,HELAS3@0.0328245,HEPG2@0.049209,HMEC@0,HSMM@0,HUVEC@0,K562@0.043658,MCF7@0.0140715,NHEK@0.00477367,NHLF@0,SKNSHRA@0.033784, 0 0 0 0 ENSG00000251270.1 ENST00000512277.1 chr3:140833966-140843024 3 389 8665 intronic 5.72 0 0,0,1 0 0,0,0 0 13.1873052510098 0 0 8.93156376226197 0 0 8.4867859203693 0 0 0 chimp,horse,human,macaque,marmoset,orangutan, antisense antisense A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000249417.1 ENST00000507698.1 chr3:140986195-141085979 3 419 99361 intronic -8.52 1 0,0,1 0 0,0,0 43.9331742243437 16.5828443755598 5.205 54.2887828162291 10.8136492185063 12.12 54.0023866348449 16.7275289097332 12.492 0 0 chimp,cow,dog,elephant,guinea_pig,horse,human,macaque,marmoset,orangutan,panda,pig,rabbit, processed_transcript processed_transcript A549@0,AG04450@0.006596,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000250170.1 ENST00000507770.1 chr3:141243975-141244963 2 610 376 intronic -11.86 0 0,0,1 0 0,0,0 7.91803278688525 0 3.91 61.3180327868852 15.8909574468085 7.232 50.3344262295082 17.2207446808511 2.768 1 1 chimp,human,macaque,marmoset,orangutan, sense_intronic sense_intronic A549@0.0585995,AG04450@0.115761,BJ@0.05947,GM12878@0.0224565,H1HESC@0.0328615,HELAS3@0.100078,HEPG2@0.020387,HMEC@0,HSMM@0,HUVEC@0.082757,K562@0.125588,MCF7@0.0307835,NHEK@0.0941633,NHLF@0,SKNSHRA@0.0360815, 0 0 0 0 ENSG00000242104.2 ENST00000479349.1 chr3:141382041-141404009 4 480 21482 intergenic 1.74 0 0,0,0 0 0,0,0 85.2791666666667 2.1509170468299 0 142.122916666667 1.07932222325668 8.471 156.43125 3.92686900661019 19.187 0 0 cat,chimp,dog,elephant,guinea_pig,horse,human,macaque,mouse,opossum,panda,pig,rabbit,rat, lincRNA lincRNA A549@0.0138985,AG04450@0.024307,BJ@0.039165,GM12878@0,H1HESC@0.058038,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0.004251,HUVEC@0,K562@0.0291145,MCF7@0.007409,NHEK@0,NHLF@0,SKNSHRA@0.0375455, 0 0 0 0 ENSG00000242104.2 ENST00000474979.2 chr3:141403947-141439915 5 550 35410 intergenic -0.13 0 0,0,0 0 0,0,0 0 2.31646427562835 10.81 114.623636363636 2.34462016379554 6.095 177.536363636364 12.5364586275064 10.483 0 0 cat,chimp,dog,elephant,guinea_pig,horse,human,macaque,marmoset,mouse,opossum,orangutan,panda,pig,rabbit,rat, lincRNA lincRNA A549@0.0138985,AG04450@0.024307,BJ@0.039165,GM12878@0,H1HESC@0.058038,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0.004251,HUVEC@0,K562@0.0291145,MCF7@0.007409,NHEK@0,NHLF@0,SKNSHRA@0.0375455, 0 0 0 0 ENSG00000244124.1 ENST00000492725.1 chr3:141637094-141637863 2 374 393 intronic 0 0 0,0,1 0 0,0,0 0 0 0 0 0 0 0 0 0 0 0 cat,chimp,cow,dog,elephant,horse,human,macaque,marmoset,orangutan,panda,pig, antisense antisense A549@0.017319,AG04450@0,BJ@0,GM12878@0.0115955,H1HESC@0,HELAS3@0,HEPG2@0.0171195,HMEC@0,HSMM@0.0060625,HUVEC@0,K562@0.0071205,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0.030192, 0 0 0 0 ENSG00000244327.1 ENST00000460977.1 chr3:142184157-142191179 2 763 6257 intronic 0.07 0 0,0,0 0 0,0,0 0 50.9236055617708 0 0 64.4144158542432 0 1.59239842726081 70.408342656225 12.299 0 0 chimp,cow,human,macaque,orangutan, processed_transcript processed_transcript A549@0.038803,AG04450@0.0152225,BJ@0.043624,GM12878@0.066163,H1HESC@0.029818,HELAS3@0.0397465,HEPG2@0.036119,HMEC@0,HSMM@0.0047685,HUVEC@0.0107335,K562@0.0824655,MCF7@0.012689,NHEK@0.0191213,NHLF@0.0040455,SKNSHRA@0.0435605, 0 0 0 0 ENSG00000239641.1 ENST00000485338.1 chr3:142373626-142375587 2 344 1615 intronic -2.57 0 0,0,0 0 0,0,0 0 0 0 0 1.79133126934985 1.912 0 2.52631578947368 2.008 0 0 cat,chimp,cow,dog,human,marmoset,orangutan,pig,rabbit, antisense antisense A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0.0617655,HEPG2@0.0188645,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0.014331, 0 0 0 0 ENSG00000243818.3 ENST00000476385.1 chr3:142645517-142661376 5 1820 14031 intergenic 0.24 0 0,0,1 0 0,0,0 0 17.4696742926377 28.28 8.66043956043956 15.3145178533248 21.885 11.7873626373626 15.8920960729813 30.605 0 0 chimp,elephant,human,macaque,marmoset,orangutan,rabbit, antisense antisense A549@0,AG04450@0,BJ@0,GM12878@0.0182745,H1HESC@0,HELAS3@0.011224,HEPG2@0.0797835,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0.0026125,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000243818.3 ENST00000465194.3 chr3:142656292-142660299 2 497 3508 intergenic 0 0 0,0,0 0 0,0,0 0 63.1046180159635 0 0 56.3030216647662 3.51 0 57.9281641961231 3.692 0 0 chimp,human,macaque,marmoset,orangutan,panda,pig, antisense antisense A549@0,AG04450@0,BJ@0,GM12878@0.0182745,H1HESC@0,HELAS3@0.011224,HEPG2@0.0797835,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0.0026125,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000243818.3 ENST00000479792.1 chr3:142657082-142660613 2 785 2744 intergenic -5.11 0 0,0,0 0 0,0,0 0 80.6745626822158 0 13.9898089171975 68.673833819242 0 14.428025477707 70.6610787172011 0 0 0 chimp,human,macaque,marmoset,orangutan,rabbit, antisense antisense A549@0,AG04450@0,BJ@0,GM12878@0.0182745,H1HESC@0,HELAS3@0.011224,HEPG2@0.0797835,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0.0026125,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000241570.2 ENST00000497652.1 chr3:142682900-142719932 5 511 36513 intergenic 2.91 0 0,1,0 0 0,0,0 0 10.7127872264673 253.742 0 6.71097965108318 251.011 0 7.64489359953989 231.118 0 0 cat,chimp,cow,dog,horse,human,macaque,marmoset,orangutan,panda,pig, antisense antisense A549@0.284886,AG04450@0.0040885,BJ@0,GM12878@0.005077,H1HESC@0.106463,HELAS3@0,HEPG2@0.076838,HMEC@0,HSMM@0.0039575,HUVEC@0.0060675,K562@0.0333715,MCF7@0,NHEK@0,NHLF@0.0202875,SKNSHRA@0.032109, 0 0 0 0 ENSG00000241570.2 ENST00000478823.1 chr3:142683002-142683745 2 608 133 intergenic -1.73 0 0,0,0 0 0,0,0 0 0 186.116 14.5871710526316 33.0526315789474 187.975 20.59375 33.7894736842105 161.452 0 0 cat,chimp,cow,elephant,horse,human,macaque,marmoset,orangutan,panda,pig, antisense antisense A549@0.284886,AG04450@0.0040885,BJ@0,GM12878@0.005077,H1HESC@0.106463,HELAS3@0,HEPG2@0.076838,HMEC@0,HSMM@0.0039575,HUVEC@0.0060675,K562@0.0333715,MCF7@0,NHEK@0,NHLF@0.0202875,SKNSHRA@0.032109, 0 0 0 0 ENSG00000241570.2 ENST00000493825.1 chr3:142683282-142683966 2 574 108 intergenic 4.96 0 0,0,0 0 0,0,0 0 0 125.12 0 70.4907407407407 128 0 72.4074074074074 104.959 0 0 chimp,human,macaque,marmoset,orangutan, antisense antisense A549@0.284886,AG04450@0.0040885,BJ@0,GM12878@0.005077,H1HESC@0.106463,HELAS3@0,HEPG2@0.076838,HMEC@0,HSMM@0.0039575,HUVEC@0.0060675,K562@0.0333715,MCF7@0,NHEK@0,NHLF@0.0202875,SKNSHRA@0.032109, 2 44 0 0 ENSG00000243733.1 ENST00000492307.1 chr3:142830644-142831201 2 366 189 intergenic -5.77 0 0,0,0 0 0,0,0 0 0 24.617 0 0 10.371 0 0 21.758 0 0 cat,chimp,dog,elephant,guinea_pig,horse,human,macaque,marmoset,orangutan,panda, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000241679.2 ENST00000483262.1 chr3:142842204-142850735 2 389 8140 intergenic 0.66 1 1,1,1 0 0,0,0 0 40.4289926289926 113.362 0 31.6050368550369 175.254 0 34.4062653562654 164.914 0 0 chimp,horse,human,macaque,orangutan, lincRNA lincRNA A549@0,AG04450@0.008247,BJ@0.0067635,GM12878@0.113706,H1HESC@0.0198345,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0.0056255,K562@0.083828,MCF7@0,NHEK@0.0275837,NHLF@0,SKNSHRA@0.009553, 0 0 0 0 ENSG00000241679.2 ENST00000465880.1 chr3:142850116-142850733 2 527 88 intergenic 0.65 1 0,0,1 0 0,0,0 59.3605313092979 0 24.984 28.1935483870968 0 3.419 35.9335863377609 0 6.695 0 0 cat,chimp,dog,human,macaque,marmoset,mouse,orangutan,panda, lincRNA lincRNA A549@0,AG04450@0.008247,BJ@0.0067635,GM12878@0.113706,H1HESC@0.0198345,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0.0056255,K562@0.083828,MCF7@0,NHEK@0.0275837,NHLF@0,SKNSHRA@0.009553, 0 0 0 0 ENSG00000240888.1 ENST00000491347.1 chr3:143031909-143033271 2 439 921 intronic -0.92 0 0,0,1 0 0,0,0 0 0 107.676 0 0 139.489 0 0 146.604 0 0 chimp,guinea_pig,horse,human,macaque,marmoset,orangutan,panda,rabbit,rat, sense_intronic sense_intronic A549@0,AG04450@0.009804,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0.0196905,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000240012.1 ENST00000479030.1 chr3:143061088-143065913 4 514 4305 intronic -6.85 0 0,0,0 0 0,0,0 0 33.5965156794425 0 24.7354085603113 37.2267131242741 278.55 38.9241245136187 50.2364692218351 2.761 0 0 chimp,cow,dog,elephant,guinea_pig,horse,human,macaque,marmoset,mouse,orangutan,panda,pig,rabbit,rat, antisense antisense A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000244493.1 ENST00000490153.1 chr3:143100180-143101003 2 325 496 exonic -1.99 0 0,0,0 0 0,0,0 20.5230769230769 0 8.432 47.6369230769231 5.5 29.134 58.2430769230769 5.74395161290323 27.239 0 0 chimp,human,macaque,marmoset,orangutan, antisense antisense A549@0,AG04450@0,BJ@0,GM12878@0.0194975,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0.024858,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000244358.1 ENST00000495382.1 chr3:145657699-145679323 4 795 20823 intergenic 0.38 0 0,0,0 0 0,0,0 0 6.76367478269222 60.547 0 3.81986265187533 12.936 0 9.43192623541276 19.808 0 0 chimp,human,macaque,marmoset,orangutan, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0.0062375,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000244358.1 ENST00000482351.1 chr3:145657755-145675618 2 622 17239 intergenic 0.38 0 0,0,0 0 0,0,0 0 0.599802772782644 60.547 2.53697749196141 2.6041533731655 12.936 3.37620578778135 8.47015488137363 19.808 0 0 chimp,dog,elephant,horse,human,macaque,marmoset,orangutan,pig,rabbit, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0.0062375,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000240095.1 ENST00000494509.1 chr3:145679542-145681410 2 567 1299 intergenic -4.38 0 0,0,0 0 0,0,0 0 0 36.9 0 0 14.539 9.7389770723104 0 16.769 0 0 chimp,dog,human,macaque,marmoset,orangutan, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0.146204,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0.007227,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000240032.1 ENST00000490375.1 chr3:145784131-145786972 2 707 2132 exonic -4.03 1 0,0,0 0 0,0,0 0 0 46.512 0 0 75.568 0 0 80.182 0 0 chimp,human,macaque,marmoset,orangutan,pig, antisense antisense A549@1.32271,AG04450@1.18454,BJ@1.05646,GM12878@0.0110925,H1HESC@0.234081,HELAS3@0.597797,HEPG2@1.09166,HMEC@0.127055,HSMM@0.425323,HUVEC@1.05499,K562@0.0075525,MCF7@0.533079,NHEK@0.632343,NHLF@0.087515,SKNSHRA@0, 0 0 0 0 ENSG00000241457.1 ENST00000473817.1 chr3:146307389-146308112 2 448 273 exonic -4.09 0 0,0,0 0 0,0,0 108.828125 20.6043956043956 0 125.035714285714 42.2307692307692 0 192.848214285714 54.5934065934066 0 0 0 cat,chimp,cow,dog,elephant,guinea_pig,horse,human,macaque,marmoset,mouse,opossum,orangutan,panda,pig,platypus,rabbit,rat, antisense antisense A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000243620.1 ENST00000473299.1 chr3:146627472-147088443 6 564 460397 intergenic 4.73 0 0,0,1 0 0,0,0 93.886524822695 24.6129731514323 109.423 99.9007092198582 30.589645458159 232.196 101.602836879433 34.7186341353224 237.296 0 0 chimp,cow,dog,guinea_pig,horse,human,macaque,marmoset,orangutan,pig,rabbit, antisense antisense A549@0,AG04450@0,BJ@0,GM12878@0.0046585,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0.00361,HUVEC@0,K562@0.004782,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000242671.1 ENST00000470860.1 chr3:146639710-146641628 3 513 1401 intergenic 2.29 0 0,1,0 0 0,0,0 0 0 0 0 0 0 0 0 0 0 0 chimp,human,macaque,marmoset,orangutan, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000242671.1 ENST00000471638.1 chr3:146639750-146643005 2 1827 1426 intergenic 2.29 0 0,1,1 0 0,0,0 42.7586206896552 0 0 49.8598795840175 0 0 58.1176792556103 0 0 0 0 chimp,cow,dog,elephant,guinea_pig,horse,human,macaque,marmoset,orangutan,panda,rabbit, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000241202.1 ENST00000462168.1 chr3:147104754-147105240 2 266 218 exonic 0 0 0,0,1 0 0,0,0 291.172932330827 161.266055045872 228.699 382.857142857143 124.412844036697 235.254 398.473684210526 99.4220183486239 218.462 0 0 cat,chimp,cow,dog,elephant,horse,human,macaque,marmoset,orangutan,panda,pig,platypus,rat, antisense antisense A549@0,AG04450@0,BJ@0.0090295,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000239661.1 ENST00000470739.1 chr3:147561910-147564444 3 490 2040 intergenic -3.82 0 0,0,0 0 0,0,0 57.0183673469388 6.54117647058824 465.441 54.6510204081633 2.15196078431373 545.102 57.4959183673469 2.07598039215686 533.39 0 0 chimp,horse,human,macaque,marmoset,orangutan,panda,pig,rabbit, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0.011864,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000239922.1 ENST00000467198.1 chr3:147657791-147660801 2 2567 441 intergenic -0.08 0 0,0,0 0 0,0,0 79.4842228282041 83.4829931972789 74.258 104.189715621348 68.8140589569161 63.565 104.4242306194 59.1587301587302 54.71 0 0 chimp,cow,dog,guinea_pig,horse,human,macaque,marmoset,mouse,opossum,orangutan,panda,pig,rabbit,rat, lincRNA lincRNA A549@0,AG04450@0.0011525,BJ@0,GM12878@0,H1HESC@0.0135215,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0.10731,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0.0007595,SKNSHRA@0, 0 0 0 0 ENSG00000239922.1 ENST00000485006.1 chr3:147657807-147724542 4 420 66309 intergenic 1.82 0 0,0,0 0 0,0,0 67.4285714285714 26.9849040100137 74.258 96.3690476190476 32.5941576558235 65.588 161.1 35.8333861165151 56.733 0 0 chimp,dog,elephant,guinea_pig,human,marmoset,orangutan,panda,pig,rabbit, lincRNA lincRNA A549@0,AG04450@0.0011525,BJ@0,GM12878@0,H1HESC@0.0135215,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0.10731,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0.0007595,SKNSHRA@0, 0 0 0 0 ENSG00000241131.1 ENST00000490465.1 chr3:147795946-147805816 2 389 9479 intergenic -0.47 1 0,0,1 0 0,0,0 0 182.494566937441 14.88 0 181.210465238949 10.65 0 199.653127967085 17.771 0 0 cat,chimp,cow,dog,horse,human,macaque,marmoset,orangutan,panda,rabbit, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000241792.1 ENST00000476987.1 chr3:147810962-147845020 4 488 33564 intergenic -3.48 1 0,0,0 0 0,0,0 233.229508196721 10.7879275414134 179.376 228.801229508197 10.3746871648195 225.63 240.784836065574 11.8449231319271 225.674 0 0 chimp,cow,dog,elephant,guinea_pig,horse,human,macaque,marmoset,opossum,orangutan,panda,pig,rabbit, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000244650.2 ENST00000477153.1 chr3:147878698-147944382 3 487 65193 intergenic -3.13 1 0,0,0 0 0,0,0 0 22.3606215391223 0 1.52772073921971 29.3237617535625 0 13.5585215605749 40.8869663920973 4.326 0 0 cat,chimp,dog,human,macaque,marmoset,orangutan,panda,pig, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000244650.2 ENST00000470219.2 chr3:147909506-147944393 3 373 34510 intergenic 4.47 1 0,0,0 0 0,0,0 0 28.5420929086852 26.676 0 33.5036079636016 106.435 0 34.7418494798157 103.671 0 0 chimp,cow,horse,human,macaque,marmoset,orangutan,pig, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000243347.1 ENST00000460324.1 chr3:147913516-147997885 5 674 83687 intergenic -3.95 0 0,1,0 0 0,0,0 0 30.7402463943026 0 0 32.5397015068051 0 0 35.2980391219664 0 0 0 chimp,human,macaque,marmoset,orangutan, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0.017507,HELAS3@0.054721,HEPG2@0.096415,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 134 2 0 0 ENSG00000242440.1 ENST00000469812.1 chr3:147998678-148029947 3 375 30890 intergenic 0 0 0,0,0 0 0,0,0 0 19.3225963094853 0 13.784 26.6484622855293 0 26.9573333333333 28.7421495629654 0 0 0 chimp,elephant,human,macaque,orangutan, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000242440.1 ENST00000481334.1 chr3:148029934-148117743 3 387 87418 intergenic -5.39 1 0,0,0 0 0,0,0 0 16.8364410075728 0 4.9405684754522 22.4919238600746 33.975 5.18863049095607 25.3595483767645 36.365 0 0 cat,chimp,cow,dog,elephant,guinea_pig,horse,human,macaque,marmoset,orangutan,rabbit, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000240521.1 ENST00000488190.1 chr3:148568720-148677899 5 1409 107762 intronic 0.38 1 0,0,0 0 0,0,0 13.9403832505323 20.2006087489096 0 11.4499645138396 23.7552755145599 0 11.6018452803407 24.7073550973442 0 0 0 chimp,cow,guinea_pig,human,macaque,marmoset,orangutan,rabbit,rat, antisense antisense A549@0,AG04450@0,BJ@0.0025305,GM12878@0,H1HESC@0,HELAS3@0.012854,HEPG2@0.0057875,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000239718.1 ENST00000492461.1 chr3:148804119-148820610 3 412 16075 exonic 5.04 0 0,1,0 0 0,0,0 4.99029126213592 2.44105754276827 17.613 13.4733009708738 3.78233281493002 21.058 13.8422330097087 5.73424572317263 21.2 0 0 cat,chimp,human,macaque,orangutan,pig, antisense antisense A549@0,AG04450@0,BJ@0,GM12878@0.0063985,H1HESC@0.0049985,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0.0064515,MCF7@0.0048445,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000244162.1 ENST00000482639.1 chr3:148994297-149009587 5 561 14721 intergenic -1.34 0 0,0,0 0 0,0,0 0 0 0 8.90730837789661 0.577949867536173 0 54.7219251336898 0.608110862033829 0 0 0 cat,chimp,elephant,human,macaque,marmoset,opossum,orangutan, processed_transcript processed_transcript A549@0.0042945,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0.0261855,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000244468.1 ENST00000489011.1 chr3:149002569-149051440 2 549 48320 exonic 2.10 0 0,1,1 0 0,0,0 55.9544626593807 5.16485927152318 0 83.0346083788707 5.16574917218543 0 85.2386156648452 5.21684602649007 0 0 0 chimp,human,orangutan, antisense antisense A549@0.300323,AG04450@0,BJ@0,GM12878@0.0182925,H1HESC@0.183114,HELAS3@1.12529,HEPG2@0.432141,HMEC@0,HSMM@0.014937,HUVEC@0,K562@0.320387,MCF7@0.81142,NHEK@0.00463367,NHLF@0.0070035,SKNSHRA@0, 134 2 0 0 ENSG00000240541.2 ENST00000496491.1 chr3:149095565-149104370 2 752 8051 exonic 2.59 1 1,1,1 0 0,0,0 0 0 64.139 20.1515957446808 0.178114519935412 74.806 215.143617021277 0.42851819649733 86.205 0 0 cat,chimp,dog,elephant,guinea_pig,human,macaque,marmoset,orangutan,pig, antisense antisense A549@0.769253,AG04450@0.0815455,BJ@0.018324,GM12878@0,H1HESC@0,HELAS3@5.52148,HEPG2@2.39215,HMEC@0.032583,HSMM@0.0922095,HUVEC@0.060579,K562@0,MCF7@0.00412,NHEK@0.065315,NHLF@0.0230605,SKNSHRA@0.043396, 0 0 0 0 ENSG00000240541.2 ENST00000484046.1 chr3:149096006-149104368 3 485 7873 intergenic 0 1 0,0,1 0 0,0,0 0 0 44.739 3.89690721649485 0.182141496253017 72.637 3.82474226804124 0.407341547059571 83.746 0 0 cat,chimp,cow,human,macaque,marmoset,orangutan, antisense antisense A549@0.769253,AG04450@0.0815455,BJ@0.018324,GM12878@0,H1HESC@0,HELAS3@5.52148,HEPG2@2.39215,HMEC@0.032583,HSMM@0.0922095,HUVEC@0.060579,K562@0,MCF7@0.00412,NHEK@0.065315,NHLF@0.0230605,SKNSHRA@0.043396, 0 0 0 0 ENSG00000243885.1 ENST00000462931.1 chr3:149101966-149103587 2 999 620 intergenic -1.83 0 0,1,0 0 0,0,0 0 0 11.48 0 0 15.741 0 3.13548387096774 11.261 0 0 chimp,elephant,guinea_pig,human,macaque,marmoset,orangutan, lincRNA lincRNA A549@0.051925,AG04450@0.0241875,BJ@0,GM12878@0.0053055,H1HESC@0,HELAS3@1.05762,HEPG2@2.50669,HMEC@0,HSMM@0,HUVEC@0.01581,K562@0,MCF7@0.0061165,NHEK@0.0154087,NHLF@0.003855,SKNSHRA@0, 0 0 0 0 ENSG00000241985.1 ENST00000463167.1 chr3:149366784-149367971 2 449 736 intronic -8.23 0 0,0,0 0 0,0,0 0 0 0 0 0 34.796 0 0 39.149 0 0 chimp,human,macaque,marmoset,orangutan, sense_intronic sense_intronic A549@0.239546,AG04450@0.165204,BJ@0.075954,GM12878@0.0776205,H1HESC@0.035295,HELAS3@0.043826,HEPG2@0.128498,HMEC@0,HSMM@0,HUVEC@0.322677,K562@0,MCF7@0,NHEK@0.0218607,NHLF@0,SKNSHRA@0.08029, 0 0 0 0 ENSG00000241313.2 ENST00000495094.1 chr3:149374807-149376098 2 973 316 exonic 18.65 0 0,1,1 0 0,0,0 245.828365878726 153.620253164557 67.34 360.16443987667 103.151898734177 101.535 322.758478931141 66.3449367088608 111.786 0 0 cat,chimp,cow,guinea_pig,human,opossum,orangutan,panda,pig,rabbit,rat, antisense antisense A549@0.183733,AG04450@0.037171,BJ@0.0991985,GM12878@0.0946715,H1HESC@0.103181,HELAS3@0.222731,HEPG2@0.138213,HMEC@0.090472,HSMM@0.0673415,HUVEC@0.129854,K562@0,MCF7@0.0618495,NHEK@0.0408233,NHLF@0.026941,SKNSHRA@0.053502, 0 0 0 0 ENSG00000241313.2 ENST00000466836.1 chr3:149374839-149375593 2 466 286 exonic 7.90 0 0,1,1 0 0,0,0 328.81974248927 169.734265734266 83.916 452.783261802575 113.972027972028 123.711 404.212446351931 73.3041958041958 132.938 0 0 cat,chimp,cow,elephant,guinea_pig,human,macaque,orangutan,panda,pig,rabbit, antisense antisense A549@0.183733,AG04450@0.037171,BJ@0.0991985,GM12878@0.0946715,H1HESC@0.103181,HELAS3@0.222731,HEPG2@0.138213,HMEC@0.090472,HSMM@0.0673415,HUVEC@0.129854,K562@0,MCF7@0.0618495,NHEK@0.0408233,NHLF@0.026941,SKNSHRA@0.053502, 0 0 0 0 ENSG00000241313.2 ENST00000479752.1 chr3:149375997-149379151 3 1697 1453 intronic -4.04 1 0,1,0 0 0,0,0 76.9145550972304 79.732966276669 171.936 63.7967000589275 41.4445973847213 227.629 45.3971714790807 33.4714384033035 193.772 0 0 chimp,human,macaque,orangutan, antisense antisense A549@0.183733,AG04450@0.037171,BJ@0.0991985,GM12878@0.0946715,H1HESC@0.103181,HELAS3@0.222731,HEPG2@0.138213,HMEC@0.090472,HSMM@0.0673415,HUVEC@0.129854,K562@0,MCF7@0.0618495,NHEK@0.0408233,NHLF@0.026941,SKNSHRA@0.053502, 0 0 0 0 ENSG00000242791.2 ENST00000471176.2 chr3:149694542-149697115 3 677 1892 intronic -3.47 1 0,1,1 0 0,0,0 0 3.95348837209302 0 0 6.39323467230444 2.976 0 8.50634249471459 3.108 0 0 chimp,guinea_pig,human,macaque,marmoset,orangutan,panda, lincRNA lincRNA A549@0.012186,AG04450@0.018191,BJ@0.05121,GM12878@0.064684,H1HESC@0.0846565,HELAS3@0.069357,HEPG2@0.0729855,HMEC@0.006022,HSMM@0,HUVEC@0.0035755,K562@0.0039375,MCF7@0.235952,NHEK@0.005696,NHLF@0,SKNSHRA@0.207648, 0 0 0 0 ENSG00000242791.2 ENST00000323689.9 chr3:149695885-149697142 2 329 926 intronic -3.47 1 0,0,1 0 0,0,0 0 0 7.48 0 0 12.096 0 0 16.094 0 0 chimp,human,macaque,marmoset,orangutan, lincRNA lincRNA A549@0.012186,AG04450@0.018191,BJ@0.05121,GM12878@0.064684,H1HESC@0.0846565,HELAS3@0.069357,HEPG2@0.0729855,HMEC@0.006022,HSMM@0,HUVEC@0.0035755,K562@0.0039375,MCF7@0.235952,NHEK@0.005696,NHLF@0,SKNSHRA@0.207648, 0 0 0 0 ENSG00000243944.1 ENST00000487840.1 chr3:149757001-149931401 3 369 174027 intronic 0 0 0,1,0 0 0,0,0 0 14.8450470329317 0 0 12.8680779419285 0 0 16.7568710602378 0 0 0 chimp,human,macaque,marmoset,orangutan, processed_transcript processed_transcript A549@0,AG04450@0.0072495,BJ@0,GM12878@0.0280765,H1HESC@0,HELAS3@0,HEPG2@0.0666395,HMEC@0,HSMM@0.006158,HUVEC@0,K562@0.013081,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0.009508, 0 0 0 0 ENSG00000243321.1 ENST00000464673.1 chr3:149795281-149797904 2 1965 656 intergenic 0.99 1 0,0,0 0 0,0,0 14.3511450381679 0 0 7.87735368956743 0 3.315 9.16590330788804 0 3.445 0 0 cat,chimp,dog,elephant,horse,human,macaque,marmoset,orangutan,rabbit, lincRNA lincRNA A549@0.0045325,AG04450@0.0087075,BJ@0,GM12878@0,H1HESC@0.0010545,HELAS3@0,HEPG2@0,HMEC@0.004163,HSMM@0.0075485,HUVEC@0,K562@0,MCF7@0.0082695,NHEK@0.0271813,NHLF@0.006922,SKNSHRA@0.164427, 0 0 0 0 ENSG00000243944.1 ENST00000472821.1 chr3:149814230-149868571 3 519 53818 intergenic -2.57 0 0,1,0 0 0,0,0 0 19.6281355680256 0 0 12.5273700248987 0 126.95183044316 13.373332342339 0 0 0 cat,chimp,cow,dog,elephant,guinea_pig,horse,human,macaque,marmoset,mouse,opossum,orangutan,panda,pig,rabbit,rat, processed_transcript processed_transcript A549@0,AG04450@0.0072495,BJ@0,GM12878@0.0280765,H1HESC@0,HELAS3@0,HEPG2@0.0666395,HMEC@0,HSMM@0.006158,HUVEC@0,K562@0.013081,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0.009508, 0 0 0 0 ENSG00000243944.1 ENST00000489690.1 chr3:149815819-149931513 3 554 115136 intergenic -9.57 0 0,1,0 0 0,0,0 0 15.9598040578099 37.797 0 11.3028505419678 42.5 0 13.241236450806 52.686 0 0 chimp,human,macaque,marmoset,orangutan, processed_transcript processed_transcript A549@0,AG04450@0.0072495,BJ@0,GM12878@0.0280765,H1HESC@0,HELAS3@0,HEPG2@0.0666395,HMEC@0,HSMM@0.006158,HUVEC@0,K562@0.013081,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0.009508, 0 0 0 0 ENSG00000241048.1 ENST00000474444.1 chr3:149919961-149942977 6 600 22406 intergenic 3.15 0 0,0,1 0 0,0,0 0 8.43827546192984 43.368 0 7.13197357850576 23.387 0 7.61077389984825 23.033 0 0 chimp,human,macaque,marmoset,orangutan, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0.13972, 0 0 0 0 ENSG00000244541.1 ENST00000472890.1 chr3:149956306-149957990 3 469 1211 intergenic -4.15 0 0,0,1 0 0,0,0 0 7.766308835673 0 0 0 6.348 0 0 12.363 0 0 chimp,human,macaque,marmoset,orangutan, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0.007799,HSMM@0,HUVEC@0,K562@0,MCF7@0.660556,NHEK@0.06948,NHLF@0,SKNSHRA@0.0096305, 0 0 0 0 ENSG00000244541.1 ENST00000498005.1 chr3:149956487-149957996 3 522 983 intergenic -4.15 0 1,1,1 0 0,0,0 0 9.35503560528993 0 0 0 6.348 0 0 8.559 0 0 chimp,cow,human,macaque,marmoset,orangutan,rabbit, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0.007799,HSMM@0,HUVEC@0,K562@0,MCF7@0.660556,NHEK@0.06948,NHLF@0,SKNSHRA@0.0096305, 0 0 0 0 ENSG00000243550.2 ENST00000471222.2 chr3:149983199-150005160 3 332 21625 intergenic 2.02 0 0,0,1 0 0,0,0 105.030120481928 18.5659653179191 0 0 11.4894335260116 2.893 8.70481927710843 13.2011098265896 2.992 0 0 cat,chimp,cow,dog,elephant,guinea_pig,horse,human,macaque,marmoset,orangutan,rabbit, lincRNA lincRNA A549@0.0329805,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0.0139535,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0.109523,NHEK@0.0432027,NHLF@0,SKNSHRA@0.0271375, 0 0 0 0 ENSG00000240137.1 ENST00000471093.1 chr3:150421351-150437775 3 299 16121 exonic 6.44 0 1,1,1 0 0,0,0 0 0.557471620867192 0 137.023411371237 1.13460703430308 2.04 135.785953177258 1.40946591402518 2.072 0 0 cat,chimp,cow,dog,horse,human,macaque,marmoset,orangutan,rabbit,rat, antisense antisense A549@0.911897,AG04450@0.397693,BJ@0.230543,GM12878@0.407396,H1HESC@0.208313,HELAS3@0.131932,HEPG2@0.114269,HMEC@0.07253,HSMM@0.064366,HUVEC@0.16798,K562@0.0744235,MCF7@0.349982,NHEK@0.396887,NHLF@0.113951,SKNSHRA@0.583722, 0 0 0 0 ENSG00000240137.1 ENST00000475393.1 chr3:150421830-150437933 4 617 15480 intergenic 6.44 0 1,1,1 0 0,0,0 0 0.580555555555556 0 54.4570502431118 1.05949612403101 11.3 148.341977309562 1.34483204134367 11.29 0 0 chimp,dog,guinea_pig,human,macaque,marmoset,mouse,orangutan,rat, antisense antisense A549@0.911897,AG04450@0.397693,BJ@0.230543,GM12878@0.407396,H1HESC@0.208313,HELAS3@0.131932,HEPG2@0.114269,HMEC@0.07253,HSMM@0.064366,HUVEC@0.16798,K562@0.0744235,MCF7@0.349982,NHEK@0.396887,NHLF@0.113951,SKNSHRA@0.583722, 0 0 0 0 ENSG00000240137.1 ENST00000463755.1 chr3:150425754-150437782 3 269 11755 intergenic 2.62 0 0,0,1 0 0,0,0 0 0.764525733730328 0 125.795539033457 1.35457252233092 0 133.334572490706 1.72828583581455 0 0 0 cat,chimp,dog,elephant,guinea_pig,human,macaque,marmoset,opossum,orangutan,rabbit,rat, antisense antisense A549@0.911897,AG04450@0.397693,BJ@0.230543,GM12878@0.407396,H1HESC@0.208313,HELAS3@0.131932,HEPG2@0.114269,HMEC@0.07253,HSMM@0.064366,HUVEC@0.16798,K562@0.0744235,MCF7@0.349982,NHEK@0.396887,NHLF@0.113951,SKNSHRA@0.583722, 0 0 0 0 ENSG00000244265.1 ENST00000461943.1 chr3:150479724-150480325 2 439 160 exonic -0.32 0 0,1,1 1 0,0,0 30.6332574031891 0 120.667 197.630979498861 0 56.816 181.485193621868 0 58.192 0 0 cat,chimp,cow,elephant,guinea_pig,horse,human,macaque,marmoset,orangutan,panda,rabbit, antisense antisense A549@0.651502,AG04450@0.108455,BJ@0.293364,GM12878@0.0447845,H1HESC@0.244769,HELAS3@1.3799,HEPG2@1.92284,HMEC@0.046424,HSMM@0.033936,HUVEC@0.091514,K562@0.126441,MCF7@0.503574,NHEK@0.0999337,NHLF@0.028602,SKNSHRA@0.0299625, 0 0 0 0 ENSG00000239265.1 ENST00000476886.1 chr3:150570271-150798513 5 2218 226016 encompassing 5.31 0 0,0,1 0 0,1,0 0 20.7819711878805 0 0 17.735863832649 0 0 20.7380495186182 0 0 0 chimp,dog,human,macaque,marmoset,mouse,orangutan, antisense non_coding A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0.004093,HELAS3@0.002248,HEPG2@0.004041,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0.0079225,NHEK@0,NHLF@0,SKNSHRA@0.0040875, 0 0 0 0 ENSG00000214237.4 ENST00000397891.3 chr3:150588832-150612089 9 1062 22179 intergenic 1.34 0 0,0,0 0 0,1,0 144.854990583804 19.1539293926687 0 251.696798493409 19.4303620541954 1.698 299.512241054614 18.8649172640786 1.988 0 0 chimp,cow,dog,elephant,horse,human,macaque,marmoset,mouse,orangutan,panda,rabbit,rat, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000214237.4 ENST00000465419.1 chr3:150588854-150608847 7 790 19191 intergenic 1.34 0 0,0,0 0 0,1,0 171.316455696203 22.1219842634568 0 283.011392405063 22.0620603407847 1.315 330.5 21.3668386222709 4.544 0 0 chimp,cow,dog,elephant,horse,human,macaque,marmoset,mouse,orangutan,panda,rabbit,rat, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000243273.1 ENST00000469268.1 chr3:150608423-150756605 3 562 147616 encompassing -0.35 0 0,0,0 0 0,0,0 0 23.6555996639931 85.615 0 19.0005148493388 128.394 0 22.574592185129 103.356 0 0 chimp,dog,elephant,guinea_pig,horse,human,macaque,marmoset,orangutan,panda,pig,rabbit, antisense antisense A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0.0095455,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000244382.1 ENST00000474598.1 chr3:150618941-150621181 2 447 1791 intergenic -3.43 0 0,0,0 0 0,0,0 110.997762863535 43.285873813512 157.297 44.5816554809843 23.3757677275265 81.693 46.4451901565996 30.2054718034617 73.236 0 0 cat,chimp,cow,dog,guinea_pig,human,marmoset,orangutan,panda, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000239265.1 ENST00000465576.1 chr3:150690465-150797617 6 2039 105103 exonic 5.31 0 0,0,1 0 0,1,0 64.1039725355566 16.8641427932599 257.571 24.1333987248651 14.1546102394794 147.356 33.2084355076018 19.3900744983492 159.449 0 0 chimp,cow,dog,elephant,guinea_pig,human,macaque,marmoset,pig, antisense non_coding A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0.004093,HELAS3@0.002248,HEPG2@0.004041,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0.0079225,NHEK@0,NHLF@0,SKNSHRA@0.0040875, 0 0 0 0 ENSG00000241151.1 ENST00000492731.1 chr3:151354962-151375754 3 577 20211 intergenic 1.89 0 0,0,0 0 0,0,0 0 0 0 4.97053726169844 2.5766661718866 0 5.22010398613518 6.36999653653951 0 0 0 chimp,dog,elephant,horse,human,macaque,marmoset,orangutan,panda,rabbit, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000242908.2 ENST00000483843.2 chr3:151469231-151645956 5 623 176094 intronic -1.48 0 0,0,0 0 0,0,0 0 3.74192192806115 0 0 4.82495712517179 0 0 10.8970209092871 0 1 1 chimp,human,macaque,marmoset,orangutan, processed_transcript processed_transcript A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@1.55793, 0 0 0 0 ENSG00000242908.2 ENST00000475855.1 chr3:151469259-151645963 4 476 176222 intronic -1.48 0 0,0,0 0 0,0,0 0 3.73920395864307 0 0 4.82145248606871 0 0 10.8891057870187 0 0 0 chimp,human,macaque,marmoset,orangutan, processed_transcript processed_transcript A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@1.55793, 0 0 0 0 ENSG00000240602.2 ENST00000471766.1 chr3:151488216-151491740 2 705 2817 intergenic -8.52 0 0,1,0 0 0,0,0 0 0 0 40.8978723404255 0.512957046503372 0 276.198581560284 0.732694355697551 0 0 0 cat,chimp,cow,dog,elephant,guinea_pig,horse,human,macaque,marmoset,mouse,opossum,orangutan,panda,rabbit,rat, lincRNA lincRNA A549@11.8805,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0.208711,HEPG2@0.607077,HMEC@0.005792,HSMM@0.006332,HUVEC@0.374977,K562@0,MCF7@0.0625975,NHEK@0.0176247,NHLF@0,SKNSHRA@0.130353, 0 0 0 0 ENSG00000240602.2 ENST00000483636.1 chr3:151488248-151502682 3 1282 13148 intergenic -3.64 1 0,1,1 0 0,0,0 8.47503900156006 0 0 57.7308892355694 4.53278065104959 0 97.7152886115445 6.91610891390326 0 0 0 chimp,cow,dog,elephant,guinea_pig,horse,human,macaque,marmoset,mouse,opossum,orangutan,panda,rabbit,rat, lincRNA lincRNA A549@11.8805,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0.208711,HEPG2@0.607077,HMEC@0.005792,HSMM@0.006332,HUVEC@0.374977,K562@0,MCF7@0.0625975,NHEK@0.0176247,NHLF@0,SKNSHRA@0.130353, 0 0 0 0 ENSG00000240602.2 ENST00000463420.1 chr3:151488266-151502205 2 718 13219 intergenic -3.64 0 1,1,1 0 0,0,0 15.1323119777159 0 0 140.16713091922 4.91580301081776 0.992 206.370473537604 7.71079506770558 3.179 0 0 chimp,cow,dog,elephant,guinea_pig,horse,human,macaque,marmoset,mouse,opossum,orangutan,panda,platypus,rabbit,rat, lincRNA lincRNA A549@11.8805,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0.208711,HEPG2@0.607077,HMEC@0.005792,HSMM@0.006332,HUVEC@0.374977,K562@0,MCF7@0.0625975,NHEK@0.0176247,NHLF@0,SKNSHRA@0.130353, 0 0 0 0 ENSG00000240602.2 ENST00000496128.1 chr3:151488360-151494700 2 147 6191 intergenic 0 0 0,1,1 0 0,0,0 0 0 0 104.659863945578 5.48457438216766 4.46 139.503401360544 9.63285414311097 10.328 0 0 cat,chimp,cow,dog,elephant,guinea_pig,horse,human,macaque,marmoset,mouse,opossum,orangutan,panda,rabbit,rat, lincRNA lincRNA A549@11.8805,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0.208711,HEPG2@0.607077,HMEC@0.005792,HSMM@0.006332,HUVEC@0.374977,K562@0,MCF7@0.0625975,NHEK@0.0176247,NHLF@0,SKNSHRA@0.130353, 0 0 0 0 ENSG00000240602.2 ENST00000462937.1 chr3:151491267-151501697 3 319 10107 intergenic -6.86 0 0,0,1 0 0,0,0 0 0 0 127.658307210031 3.51310972593252 0 220.401253918495 4.86959532996933 2.747 0 0 cat,chimp,cow,dog,elephant,guinea_pig,horse,human,macaque,marmoset,mouse,opossum,orangutan,panda,platypus,rabbit,rat, lincRNA lincRNA A549@11.8805,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0.208711,HEPG2@0.607077,HMEC@0.005792,HSMM@0.006332,HUVEC@0.374977,K562@0,MCF7@0.0625975,NHEK@0.0176247,NHLF@0,SKNSHRA@0.130353, 0 0 0 0 ENSG00000250271.1 ENST00000485020.1 chr3:151515272-151526037 3 387 10374 intergenic 2.80 0 0,0,0 0 0,0,0 0 0 0 20.6899224806202 0.64545980335454 0 35 2.14999036051668 0 0 0 chimp,elephant,guinea_pig,human,macaque,marmoset,mouse,orangutan,rabbit, lincRNA lincRNA A549@14.4923,AG04450@0.017241,BJ@0.0532915,GM12878@0,H1HESC@0,HELAS3@0.0115875,HEPG2@0.044283,HMEC@0,HSMM@0.005845,HUVEC@0.082066,K562@0,MCF7@0,NHEK@0.00338533,NHLF@0,SKNSHRA@0.169955, 0 0 0 0 ENSG00000239941.1 ENST00000482382.1 chr3:151835962-151869513 2 552 32997 intergenic -2.69 0 0,1,0 0 0,0,0 0 3.05264114919538 0 5.39130434782609 1.08418947177016 9.669 5.45652173913043 1.60984331908961 10.876 0 0 chimp,cow,human,macaque,orangutan, lincRNA lincRNA A549@0,AG04450@0.008502,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0.030949,MCF7@0,NHEK@0.135616,NHLF@0,SKNSHRA@0.170679, 0 0 0 0 ENSG00000243305.1 ENST00000463255.1 chr3:152175548-152214602 2 472 38580 exonic 2.26 0 0,1,0 0 0,0,0 544.512711864407 85.1208398133748 0 636.254237288136 77.5524883359253 19.507 539.754237288136 71.2437273198548 22.435 0 0 cat,chimp,cow,dog,elephant,guinea_pig,horse,human,macaque,marmoset,mouse,opossum,orangutan,panda,pig,platypus,rabbit,rat, antisense antisense A549@0,AG04450@0,BJ@0,GM12878@0.044506,H1HESC@0.0212925,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0.009728,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000244545.1 ENST00000496084.1 chr3:152365935-152368236 2 485 1814 intergenic 0 0 0,0,0 0 0,0,0 70.4969072164948 35.7469680264609 0 33.960824742268 4.38423373759647 0 34.6329896907217 10.6471885336273 0 0 0 cat,chimp,cow,dog,elephant,guinea_pig,horse,human,macaque,marmoset,orangutan,panda,pig,rabbit, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0.010818,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000241732.1 ENST00000460407.1 chr3:152557179-152559228 1 2049 0 intergenic 0.50 1 0,0,1 0 0,0,0 104.829184968277 0 20.664 62.6603221083455 0 12.742 70.7935578330893 0 11.869 0 0 cat,chimp,cow,dog,elephant,guinea_pig,horse,human,macaque,marmoset,mouse,opossum,orangutan,panda,pig,rabbit,rat, lincRNA lincRNA A549@0.133277,AG04450@0.0178265,BJ@0,GM12878@0.008187,H1HESC@1.17788,HELAS3@0.0203615,HEPG2@0.002661,HMEC@0.031958,HSMM@0,HUVEC@0.250175,K562@5.14093,MCF7@0.145232,NHEK@0.29678,NHLF@0.208694,SKNSHRA@0, 0 0 0 0 ENSG00000244268.1 ENST00000487827.1 chr3:152874300-152879564 2 321 4941 intergenic 0.99 0 0,1,0 0 0,0,0 0 40.3707751467314 89.794 8.10280373831776 25.1032179720704 259.946 8.52336448598131 26.2386156648452 185.853 0 0 chimp,human,macaque,marmoset,orangutan, antisense antisense A549@0.0626485,AG04450@0,BJ@0.0076225,GM12878@0.0722825,H1HESC@0.022983,HELAS3@0.112091,HEPG2@0.10134,HMEC@0,HSMM@0,HUVEC@0,K562@0.0387085,MCF7@0.069315,NHEK@0.0382607,NHLF@0.043765,SKNSHRA@0.023961, 0 0 0 0 ENSG00000241220.1 ENST00000498457.1 chr3:153074896-153091975 2 632 16445 intergenic 3.87 0 0,1,0 0 0,0,0 0 11.8859835816358 0 0 8.7148677409547 0 0 9.1554879902706 0 0 0 cat,chimp,dog,elephant,horse,human,macaque,marmoset,orangutan,panda,pig, lincRNA lincRNA A549@0,AG04450@0,BJ@0.020417,GM12878@0.0147885,H1HESC@0.009375,HELAS3@0,HEPG2@0.0068635,HMEC@0,HSMM@0,HUVEC@0,K562@0.0735905,MCF7@0,NHEK@0.060837,NHLF@0,SKNSHRA@0.0480335, 0 0 0 0 ENSG00000241912.1 ENST00000462300.1 chr3:153094620-153095351 2 380 349 intergenic 0.39 0 0,1,0 0 0,0,0 0 0 0 0 0 0 0 0 0 0 0 chimp,human,rabbit, lincRNA lincRNA A549@0,AG04450@0.050647,BJ@0,GM12878@0.027806,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0.054209,MCF7@0,NHEK@0.119816,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000238755.2 ENST00000492569.1 chr3:153102723-153105157 2 1956 476 intergenic 0.33 0 0,0,0 0 0,0,0 22.0833333333333 0 0 5.95398773006135 0 0 9.24437627811861 0 0 0 0 chimp,human,macaque,marmoset,orangutan, lincRNA lincRNA A549@0,AG04450@0.001647,BJ@0,GM12878@0.001197,H1HESC@0,HELAS3@0.0011935,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0.0018385,NHEK@0,NHLF@0,SKNSHRA@0.001443, 0 0 0 0 ENSG00000240456.2 ENST00000493214.2 chr3:153102898-153480315 7 805 376600 encompassing -0.73 0 0,0,0 0 0,0,0 53.6583850931677 4.32885820499203 0 12.5068322981366 4.33448220924057 0 18.6012422360248 5.83117896972915 0 0 0 chimp,dog,elephant,guinea_pig,human,macaque,marmoset,orangutan,pig,rabbit,rat, processed_transcript processed_transcript A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0.008227,NHEK@0,NHLF@0,SKNSHRA@0.002109, 0 0 0 0 ENSG00000243012.1 ENST00000462835.1 chr3:153149645-153161320 3 512 11159 intergenic 5.15 0 0,0,0 0 0,0,0 0 16.055560534098 0 0 15.8900439107447 0 0 17.9195268393225 0 0 0 chimp,human,macaque,marmoset,orangutan,panda, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0.0051985,MCF7@0,NHEK@0.0127213,NHLF@0,SKNSHRA@0.0637185, 0 0 0 0 ENSG00000240456.2 ENST00000488210.1 chr3:153448550-153697975 4 520 248899 intergenic 1.75 0 0,0,0 0 0,0,0 71.5480769230769 7.12323874342605 0 58.6788461538462 6.75063780891044 0 58.4134615384615 8.58702124154778 0 0 0 cat,chimp,cow,dog,elephant,guinea_pig,horse,human,macaque,marmoset,mouse,orangutan,pig,rat, processed_transcript processed_transcript A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0.008227,NHEK@0,NHLF@0,SKNSHRA@0.002109, 0 0 0 0 ENSG00000243486.1 ENST00000463297.1 chr3:153599315-153658625 6 697 58603 intergenic -3.06 0 1,1,1 0 0,0,0 0 9.0886302749006 0 0 9.31616128867123 0 0 10.5837585106565 0 0 0 chimp,human,macaque,marmoset,orangutan, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0.0066685,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0.209682,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0.035445,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000243069.1 ENST00000491862.1 chr3:153742190-153838999 4 2594 94209 exonic 1.23 1 0,0,0 0 0,0,0 5.34387047031611 5.85258308654163 44.7 3.59521973785659 5.5864726300035 93.714 4.45720894371627 10.0336061310491 76.941 0 0 cat,chimp,cow,dog,elephant,guinea_pig,horse,human,macaque,marmoset,mouse,orangutan,panda,rabbit, antisense antisense A549@0.069752,AG04450@0.0009065,BJ@0,GM12878@0,H1HESC@0.0263525,HELAS3@0.001799,HEPG2@0.0164255,HMEC@0.012437,HSMM@0.000792,HUVEC@0,K562@0,MCF7@0.0783915,NHEK@0.005596,NHLF@0.0063355,SKNSHRA@0.065791, 0 0 0 0 ENSG00000243069.1 ENST00000467912.1 chr3:153744266-153839121 4 624 94225 exonic -4.54 0 0,1,1 0 0,0,0 0 5.85158928097639 44.7 0 5.58552401167418 110.518 5.45192307692308 10.0319023613691 87.028 0 0 chimp,human,macaque,marmoset,orangutan, antisense antisense A549@0.069752,AG04450@0.0009065,BJ@0,GM12878@0,H1HESC@0.0263525,HELAS3@0.001799,HEPG2@0.0164255,HMEC@0.012437,HSMM@0.000792,HUVEC@0,K562@0,MCF7@0.0783915,NHEK@0.005596,NHLF@0.0063355,SKNSHRA@0.065791, 0 0 0 0 ENSG00000243069.1 ENST00000480639.1 chr3:153744268-153839052 4 578 94200 exonic -4.54 0 0,1,1 0 0,0,0 0 5.85314225053079 44.7 0 5.58700636942675 95.818 5.88581314878893 10.0345647558386 78.531 0 0 chimp,human,macaque,marmoset,orangutan, antisense antisense A549@0.069752,AG04450@0.0009065,BJ@0,GM12878@0,H1HESC@0.0263525,HELAS3@0.001799,HEPG2@0.0164255,HMEC@0.012437,HSMM@0.000792,HUVEC@0,K562@0,MCF7@0.0783915,NHEK@0.005596,NHLF@0.0063355,SKNSHRA@0.065791, 0 0 0 0 ENSG00000243069.1 ENST00000479270.1 chr3:153744318-153839121 4 591 94206 exonic -7.48 0 0,1,1 0 0,0,0 0 5.85276946266692 44.7 0 5.58665053181326 110.518 2.87817258883249 10.0339256522939 87.028 0 0 chimp,human,macaque,marmoset,orangutan, antisense antisense A549@0.069752,AG04450@0.0009065,BJ@0,GM12878@0,H1HESC@0.0263525,HELAS3@0.001799,HEPG2@0.0164255,HMEC@0.012437,HSMM@0.000792,HUVEC@0,K562@0,MCF7@0.0783915,NHEK@0.005596,NHLF@0.0063355,SKNSHRA@0.065791, 0 0 0 0 ENSG00000243861.1 ENST00000498604.1 chr3:154229324-154257098 2 277 27495 intergenic 0 0 0,0,0 0 0,0,0 60.8808664259928 0.476813966175668 0 0 0.832951445717403 8.189 0 2.42684124386252 6.539 0 0 cat,chimp,cow,elephant,guinea_pig,horse,human,marmoset,orangutan,panda, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000243969.1 ENST00000478814.1 chr3:154544805-154578806 2 349 33650 intergenic -6.13 0 0,0,0 0 0,0,0 0 0.682317979197623 0 0 2.78151560178306 0 9.34957020057307 3.57117384843982 0 0 0 chimp,cow,elephant,horse,human,macaque,marmoset,orangutan,pig,rabbit, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0.00591,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0.005559,SKNSHRA@0, 0 0 0 0 ENSG00000243953.1 ENST00000486545.1 chr3:154687072-154688012 2 519 419 intergenic -9.93 0 0,0,0 0 0,0,0 34.1233140655106 0 0 81.9152215799615 3.99284009546539 6.128 82.354527938343 4.05966587112172 5.44 0 0 chimp,cow,dog,elephant,guinea_pig,human,macaque,marmoset,orangutan,panda,rabbit, lincRNA lincRNA A549@0,AG04450@0,BJ@0.0124225,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0.0178265,MCF7@0.0192945,NHEK@0.01267,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000240666.1 ENST00000484721.1 chr3:154876530-154901074 2 455 24087 exonic 3.40 0 0,0,0 0 0,0,0 20.7912087912088 21.8333540914186 0 12.6197802197802 31.2085357246648 0 18.356043956044 31.3654253331673 3.669 0 0 chimp,cow,guinea_pig,human,macaque,orangutan,panda,rabbit,rat, antisense antisense A549@0,AG04450@0.0051535,BJ@0,GM12878@0,H1HESC@0.397663,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0.0173333,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000241336.1 ENST00000462531.1 chr3:154958734-154960913 2 903 1274 intergenic -5.66 1 0,0,0 0 0,0,0 0 0 0 0 6.34065934065934 0 0 6.78100470957614 0 0 0 cat,chimp,dog,elephant,human,macaque,marmoset,orangutan,panda, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000241336.1 ENST00000490497.1 chr3:154958737-154960933 3 420 1772 intergenic -5.66 1 0,0,0 0 0,0,0 0 0 0 0 4.55869074492099 0 0 4.87528216704289 0 0 0 cat,chimp,cow,elephant,human,macaque,marmoset,orangutan,rabbit, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000240045.1 ENST00000489090.1 chr3:155008018-155011564 3 870 2672 intergenic -2.05 1 0,1,1 0 0,0,0 92.5080459770115 2.88547904191617 35.7 88.9804597701149 10.1815119760479 40.301 88.1091954022988 11.6047904191617 49.547 0 0 chimp,dog,elephant,guinea_pig,horse,human,macaque,marmoset,mouse,orangutan,panda,rat, lincRNA lincRNA A549@0.0099455,AG04450@0,BJ@0.003707,GM12878@0,H1HESC@0.039853,HELAS3@0.0051765,HEPG2@0,HMEC@0,HSMM@0.048664,HUVEC@0,K562@0.0026595,MCF7@0.0047105,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000242790.1 ENST00000470024.1 chr3:155008977-155011965 3 441 2543 intergenic -1.10 1 0,0,0 0 0,0,0 70.578231292517 16.958316948486 27.173 65.7596371882086 10.516319307904 51.987 68.3106575963719 11.6362563900904 50.377 0 0 cat,chimp,cow,dog,guinea_pig,human,macaque,marmoset,mouse,orangutan,panda,rabbit,rat, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0.00603,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000239508.1 ENST00000475196.1 chr3:155166973-155175542 2 1306 7261 intronic 5.73 1 0,0,0 0 0,0,0 0 0 0 0 2.01542487260708 0 0 3.82137446632695 0 0 0 chimp,human,macaque,orangutan, antisense antisense A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000242925.1 ENST00000472913.1 chr3:155203592-155204910 2 406 910 intronic -0.71 0 0,0,0 0 0,0,0 26.8275862068966 113.28021978022 154.44 26.384236453202 53.2593406593407 88.673 20.0221674876847 63.5307692307692 99.001 0 0 cat,chimp,cow,dog,elephant,human,macaque,marmoset,mouse,orangutan,panda,rabbit,rat, antisense antisense A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000240596.1 ENST00000473876.1 chr3:155933349-155945672 4 534 11783 intronic -0.83 0 0,0,0 0 0,0,0 0 1.14062632606297 0 5.29962546816479 2.67139098701519 0 5.41198501872659 3.16031570907239 0 0 0 chimp,horse,human,marmoset,orangutan,panda, antisense antisense A549@0,AG04450@0.0059935,BJ@0,GM12878@0,H1HESC@0,HELAS3@0.0127435,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0.0076435,NHEK@0.0453387,NHLF@0,SKNSHRA@0.012659, 0 0 0 0 ENSG00000242370.1 ENST00000467794.1 chr3:156158946-156164694 3 453 5291 intronic -3.59 0 0,0,0 0 0,0,0 0 9.42638442638443 0 8.34437086092715 15.2356832356832 2.868 33.1986754966887 11.6815346815347 3.012 0 0 chimp,dog,human,macaque,marmoset,orangutan,panda,pig,platypus,rabbit, antisense antisense A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0.0127645,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0.008918,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000243926.1 ENST00000492937.1 chr3:156389651-156392167 2 439 2075 exonic 3.72 1 1,1,1 1 0,0,0 16.876993166287 2.18843373493976 49.104 46.6765375854214 8.83759036144578 79.356 49.7835990888383 12.0130120481928 89.69 0 0 chimp,guinea_pig,human,macaque,marmoset,orangutan,rabbit,rat, antisense antisense A549@0.959364,AG04450@0.169079,BJ@0.0505305,GM12878@0.79554,H1HESC@0.197935,HELAS3@0.716197,HEPG2@0.803909,HMEC@0.332827,HSMM@0.152472,HUVEC@0.154616,K562@0.794861,MCF7@2.38284,NHEK@0.263909,NHLF@0.186769,SKNSHRA@0.334913, 0 0 0 0 ENSG00000243926.1 ENST00000478005.1 chr3:156389653-156391722 2 552 1515 intronic 3.72 1 0,0,1 0 0,0,0 0 0 61.293 0 4.73267326732673 104.355 0 5.0019801980198 121.243 0 0 chimp,guinea_pig,human,macaque,marmoset,orangutan, antisense antisense A549@0.959364,AG04450@0.169079,BJ@0.0505305,GM12878@0.79554,H1HESC@0.197935,HELAS3@0.716197,HEPG2@0.803909,HMEC@0.332827,HSMM@0.152472,HUVEC@0.154616,K562@0.794861,MCF7@2.38284,NHEK@0.263909,NHLF@0.186769,SKNSHRA@0.334913, 0 0 0 0 ENSG00000243926.1 ENST00000463449.1 chr3:156389711-156390659 2 733 213 intergenic 3.72 1 0,0,1 0 0,0,0 0 0 0 5.21691678035471 0 3.346 5.39154160982265 0 3.626 0 0 chimp,human,macaque,marmoset,orangutan,panda, antisense antisense A549@0.959364,AG04450@0.169079,BJ@0.0505305,GM12878@0.79554,H1HESC@0.197935,HELAS3@0.716197,HEPG2@0.803909,HMEC@0.332827,HSMM@0.152472,HUVEC@0.154616,K562@0.794861,MCF7@2.38284,NHEK@0.263909,NHLF@0.186769,SKNSHRA@0.334913, 0 0 0 0 ENSG00000240875.1 ENST00000472943.1 chr3:156465135-156534823 3 3303 66381 intergenic 3.36 1 1,1,1 1 0,0,0 3.03723887375114 30.7505611545472 0 2.89161368452922 36.3310887151444 41.659 5.7574931880109 42.4593633720493 41.7 0 0 chimp,human,macaque,orangutan, lincRNA processed_transcript A549@0.747389,AG04450@0.537083,BJ@0.844552,GM12878@0.330662,H1HESC@0.114949,HELAS3@0.627451,HEPG2@0.013143,HMEC@1.52583,HSMM@0.59274,HUVEC@0.252746,K562@0.0028685,MCF7@2.04221,NHEK@2.15911,NHLF@0.310679,SKNSHRA@0.468382, 0 0 0 0 ENSG00000240875.1 ENST00000488584.1 chr3:156467790-156469308 3 598 916 intergenic -7.62 0 1,1,1 1 0,0,0 0 84.0764192139738 155.466 3.10033444816054 35.7368995633188 92.816 3.22073578595318 43.5775109170306 96.955 0 0 cat,chimp,human,macaque,marmoset,orangutan,panda, lincRNA processed_transcript A549@0.747389,AG04450@0.537083,BJ@0.844552,GM12878@0.330662,H1HESC@0.114949,HELAS3@0.627451,HEPG2@0.013143,HMEC@1.52583,HSMM@0.59274,HUVEC@0.252746,K562@0.0028685,MCF7@2.04221,NHEK@2.15911,NHLF@0.310679,SKNSHRA@0.468382, 0 0 0 0 ENSG00000240875.1 ENST00000473352.1 chr3:156470852-156534851 2 564 63433 intergenic 3.16 0 1,1,1 1 0,0,0 0 28.5147005501868 0 3.67021276595745 35.7544022827235 41.659 6.69858156028369 41.8268251540996 39.441 0 0 chimp,human,macaque,marmoset,orangutan,panda,rat, lincRNA processed_transcript A549@0.747389,AG04450@0.537083,BJ@0.844552,GM12878@0.330662,H1HESC@0.114949,HELAS3@0.627451,HEPG2@0.013143,HMEC@1.52583,HSMM@0.59274,HUVEC@0.252746,K562@0.0028685,MCF7@2.04221,NHEK@2.15911,NHLF@0.310679,SKNSHRA@0.468382, 0 0 0 0 ENSG00000243629.1 ENST00000471357.1 chr3:156799456-156840793 4 2014 39317 intergenic 5.27 1 1,1,1 0 0,0,0 2.28301886792453 12.7357122873057 0 10.0511420059583 8.26530508431467 3.312 11.1713008937438 8.80776763232189 3.408 0 0 cat,chimp,elephant,guinea_pig,human,macaque,marmoset,mouse,orangutan,rabbit,rat, lincRNA lincRNA A549@0.0386185,AG04450@0.0755565,BJ@0.0048385,GM12878@0.0803295,H1HESC@0.0111665,HELAS3@0.046762,HEPG2@0.339724,HMEC@0.833309,HSMM@0.0537815,HUVEC@0.00241,K562@0.0194065,MCF7@0.0131095,NHEK@0.769427,NHLF@0.0213435,SKNSHRA@0.023656, 0 0 0 0 ENSG00000241544.1 ENST00000469196.1 chr3:156799630-156806336 3 1494 5208 intergenic 0.35 1 0,0,1 0 0,0,0 3.07764390896921 38.5687403993856 0 10.186077643909 16.8719278033794 3.717 11.6131191432396 16.4479646697389 6.585 0 0 cat,chimp,cow,elephant,guinea_pig,human,macaque,marmoset,mouse,orangutan, lincRNA processed_transcript A549@0.0785675,AG04450@0.0430745,BJ@0.016716,GM12878@0,H1HESC@0.0888795,HELAS3@0.102778,HEPG2@0.0218655,HMEC@1.25234,HSMM@0.033152,HUVEC@0.016474,K562@0,MCF7@0.182315,NHEK@1.32311,NHLF@0.0932035,SKNSHRA@0.005233, 0 0 0 0 ENSG00000241135.1 ENST00000467995.1 chr3:156807670-156817618 2 587 9359 intergenic -1.53 0 0,1,0 1 0,0,0 265.224872231687 0.743669195426862 11.696 61.8143100511073 2.2432952238487 0 54.267461669506 3.35580724436371 0 0 0 cow,elephant,guinea_pig,human,macaque,marmoset,orangutan,panda, lincRNA lincRNA A549@0.003492,AG04450@0.0029775,BJ@0,GM12878@0.310459,H1HESC@0,HELAS3@0.009296,HEPG2@0.0410485,HMEC@0,HSMM@0,HUVEC@0,K562@0.108388,MCF7@0,NHEK@0.0260333,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000241135.1 ENST00000474477.1 chr3:156807670-156817945 3 568 9703 intergenic 1.61 0 0,1,0 1 0,0,0 118.630281690141 9.77326600020612 11.696 3.05281690140845 5.68968360300938 0 2.89788732394366 6.31145006698959 0 0 0 elephant,guinea_pig,human,macaque,marmoset,orangutan, lincRNA lincRNA A549@0.003492,AG04450@0.0029775,BJ@0,GM12878@0.310459,H1HESC@0,HELAS3@0.009296,HEPG2@0.0410485,HMEC@0,HSMM@0,HUVEC@0,K562@0.108388,MCF7@0,NHEK@0.0260333,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000241135.1 ENST00000471719.1 chr3:156807670-156818924 3 788 10462 intergenic -1.53 1 0,1,0 1 0,0,0 85.510152284264 9.06423246033263 11.696 2.2005076142132 5.27690690116612 0 2.08883248730964 5.85356528388453 0 0 0 chimp,cow,guinea_pig,horse,human,macaque,marmoset,orangutan,panda, lincRNA lincRNA A549@0.003492,AG04450@0.0029775,BJ@0,GM12878@0.310459,H1HESC@0,HELAS3@0.009296,HEPG2@0.0410485,HMEC@0,HSMM@0,HUVEC@0,K562@0.108388,MCF7@0,NHEK@0.0260333,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000241770.1 ENST00000480817.1 chr3:156881241-156886922 2 318 5361 intergenic 1.05 0 0,0,0 0 0,0,0 0 0 0 0 0.878940496176086 0 423.691823899371 17.0434620406641 298.899 0 0 chimp,dog,guinea_pig,human,macaque,marmoset,mouse,orangutan,rabbit,rat, antisense antisense A549@0.0950355,AG04450@0.077139,BJ@0.0718105,GM12878@0.164176,H1HESC@0.22131,HELAS3@0.158521,HEPG2@0.0759115,HMEC@0.038387,HSMM@0.374143,HUVEC@0.150131,K562@0.0234485,MCF7@0.730091,NHEK@0.0758023,NHLF@0.0364495,SKNSHRA@0.220027, 0 0 0 0 ENSG00000243176.1 ENST00000460796.1 chr3:156893012-156957753 2 540 64199 intergenic 8.52 0 0,1,0 1 0,0,0 0 3.60532095515507 0 5.88703703703704 5.60837396221125 4.324 6.00925925925926 7.58985342450817 4.408 0 0 cat,chimp,cow,human,macaque,marmoset,orangutan, antisense retained_intron A549@0.0110695,AG04450@0.284169,BJ@0.322748,GM12878@0.315563,H1HESC@0.060509,HELAS3@0,HEPG2@0.04784,HMEC@0.007555,HSMM@0.048551,HUVEC@0.004486,K562@0.0803065,MCF7@0.149425,NHEK@0.00751467,NHLF@0.197885,SKNSHRA@0.373335, 0 0 0 0 ENSG00000243176.1 ENST00000487238.1 chr3:156893058-157099054 3 480 205512 exonic 8.52 0 0,1,0 1 0,0,0 69.6958333333333 8.10246603604656 0 93.6958333333333 10.6367024796606 4.324 105.625 12.4148565533886 4.408 0 0 chimp,dog,horse,human,macaque,marmoset,opossum,orangutan,panda,pig,rabbit,rat, antisense antisense A549@0.0110695,AG04450@0.284169,BJ@0.322748,GM12878@0.315563,H1HESC@0.060509,HELAS3@0,HEPG2@0.04784,HMEC@0.007555,HSMM@0.048551,HUVEC@0.004486,K562@0.0803065,MCF7@0.149425,NHEK@0.00751467,NHLF@0.197885,SKNSHRA@0.373335, 0 0 0 0 ENSG00000243176.1 ENST00000488040.1 chr3:156893136-157003080 3 564 109376 intronic 8.52 0 0,1,0 1 0,0,0 182.535460992908 6.38201250731422 0 24.5939716312057 7.96649173493271 7.503 26.2145390070922 9.33419580163839 7.653 0 0 chimp,cow,dog,elephant,guinea_pig,horse,human,macaque,marmoset,mouse,opossum,orangutan,panda,pig,rabbit,rat, antisense antisense A549@0.0110695,AG04450@0.284169,BJ@0.322748,GM12878@0.315563,H1HESC@0.060509,HELAS3@0,HEPG2@0.04784,HMEC@0.007555,HSMM@0.048551,HUVEC@0.004486,K562@0.0803065,MCF7@0.149425,NHEK@0.00751467,NHLF@0.197885,SKNSHRA@0.373335, 0 0 0 0 ENSG00000243176.1 ENST00000475102.1 chr3:156948068-157033684 4 380 85230 intronic 8.52 0 0,0,0 0 0,0,0 38.7894736842105 10.2228910008213 0 24.6078947368421 13.4576792209316 0 30.3894736842105 15.7343541006688 0 0 0 chimp,cow,elephant,horse,human,macaque,marmoset,orangutan,pig, antisense antisense A549@0.0110695,AG04450@0.284169,BJ@0.322748,GM12878@0.315563,H1HESC@0.060509,HELAS3@0,HEPG2@0.04784,HMEC@0.007555,HSMM@0.048551,HUVEC@0.004486,K562@0.0803065,MCF7@0.149425,NHEK@0.00751467,NHLF@0.197885,SKNSHRA@0.373335, 0 0 0 0 ENSG00000243176.1 ENST00000494885.1 chr3:157003949-157033934 2 515 29468 intronic 0 0 0,0,0 0 0,0,0 28.621359223301 10.2163702999864 47.57 18.1572815533981 19.2571263743722 31.066 22.4233009708738 21.7093796660785 43.276 0 0 cat,chimp,cow,dog,elephant,horse,human,macaque,marmoset,mouse,orangutan,panda,pig,rabbit,rat, antisense antisense A549@0.0110695,AG04450@0.284169,BJ@0.322748,GM12878@0.315563,H1HESC@0.060509,HELAS3@0,HEPG2@0.04784,HMEC@0.007555,HSMM@0.048551,HUVEC@0.004486,K562@0.0803065,MCF7@0.149425,NHEK@0.00751467,NHLF@0.197885,SKNSHRA@0.373335, 0 0 0 0 ENSG00000239716.1 ENST00000491909.1 chr3:157694350-157695925 2 464 1109 intergenic 2.99 0 0,0,0 0 0,0,0 0 0 74.76 0 0 145.613 0 0 158.523 0 0 chimp,elephant,guinea_pig,horse,human,macaque,marmoset,orangutan,panda,rat, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000242536.1 ENST00000488999.1 chr3:157734005-157806772 5 711 72048 intergenic 2.30 0 0,0,1 0 0,0,0 18.7623066104079 43.2349683544304 169.452 42.42194092827 47.0063429935599 123.573 7.06047819971871 44.452503886298 120.229 0 0 cat,chimp,cow,elephant,guinea_pig,horse,human,macaque,marmoset,mouse,orangutan,panda,rabbit,rat, lincRNA lincRNA A549@0,AG04450@0,BJ@0.027312,GM12878@0.005631,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0.0034305,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000242536.1 ENST00000498241.1 chr3:157734160-157806786 3 390 72232 intergenic 0.00 0 0,0,0 0 0,0,0 0 43.3127007420534 169.452 10.6153846153846 46.9209076309669 123.573 4.98461538461538 44.3715389301141 120.229 0 0 cat,chimp,cow,guinea_pig,horse,human,macaque,marmoset,orangutan,panda,rabbit, lincRNA lincRNA A549@0,AG04450@0,BJ@0.027312,GM12878@0.005631,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0.0034305,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000243150.1 ENST00000475981.1 chr3:158263009-158288855 5 1635 24203 exonic -0.72 0 0,1,0 0 0,0,0 0 10.0463992067099 0 1.48623853211009 14.676362434409 27.209 2.28929663608563 15.5733586745445 52.336 0 0 chimp,human,macaque,marmoset, lincRNA processed_transcript A549@0.004599,AG04450@0.0013665,BJ@0,GM12878@0.008916,H1HESC@0.017896,HELAS3@0.0016185,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0.0016325,MCF7@0.0238625,NHEK@0.002184,NHLF@0,SKNSHRA@0.0030815, 0 0 0 0 ENSG00000243150.1 ENST00000479233.1 chr3:158271647-158288696 4 468 16575 intergenic -2.28 0 0,0,0 0 0,0,0 0 12.4516440422323 0 0 18.860814479638 27.209 0 19.6853092006033 32.522 0 0 chimp,cow,horse,human,macaque,marmoset,orangutan, lincRNA processed_transcript A549@0.004599,AG04450@0.0013665,BJ@0,GM12878@0.008916,H1HESC@0.017896,HELAS3@0.0016185,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0.0016325,MCF7@0.0238625,NHEK@0.002184,NHLF@0,SKNSHRA@0.0030815, 0 0 0 0 ENSG00000240207.1 ENST00000477589.1 chr3:158458206-158461381 4 1083 2086 intronic -5.89 1 0,0,0 0 0,1,0 28.9778393351801 0 0 5.07571560480148 0 0 0 0 0 0 0 cat,chimp,cow,dog,horse,human,macaque,marmoset,mouse,orangutan,panda,rabbit, processed_transcript processed_transcript A549@1.16516,AG04450@0.594682,BJ@0.904864,GM12878@0.300268,H1HESC@0.253539,HELAS3@2.81758,HEPG2@0.367179,HMEC@0.016394,HSMM@0.0571325,HUVEC@0.488129,K562@0.642881,MCF7@0.132053,NHEK@0.0596827,NHLF@0.739806,SKNSHRA@1.12353, 0 0 0 0 ENSG00000240207.1 ENST00000496842.1 chr3:158458215-158461125 3 709 2197 intronic -5.99 1 0,0,0 0 0,1,0 0 0 0 5.05641748942172 0 0 0 0 0 0 0 cat,chimp,cow,guinea_pig,horse,human,macaque,marmoset,mouse,orangutan,panda,rabbit, processed_transcript processed_transcript A549@1.16516,AG04450@0.594682,BJ@0.904864,GM12878@0.300268,H1HESC@0.253539,HELAS3@2.81758,HEPG2@0.367179,HMEC@0.016394,HSMM@0.0571325,HUVEC@0.488129,K562@0.642881,MCF7@0.132053,NHEK@0.0596827,NHLF@0.739806,SKNSHRA@1.12353, 0 0 0 0 ENSG00000241211.1 ENST00000460574.1 chr3:159483176-159486243 2 506 2559 intronic -11.34 0 0,0,1 0 0,0,0 58.7905138339921 4.58382180539273 0 101.04743083004 40.9988276670574 0 76.0731225296443 38.9159828057835 0 0 0 cat,chimp,cow,guinea_pig,human,macaque,marmoset,orangutan,panda,pig, antisense antisense A549@0.008546,AG04450@0.016811,BJ@0.0047635,GM12878@0,H1HESC@0,HELAS3@0.023016,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0.042185,K562@0,MCF7@0,NHEK@0.002513,NHLF@0.0114375,SKNSHRA@0.0445255, 0 0 0 0 ENSG00000241211.1 ENST00000488247.1 chr3:159486106-159486401 2 220 73 intronic 0 0 0,0,0 0 0,0,0 0 0 0 0 0 0 0 0 0 0 0 chimp,human,marmoset,orangutan, antisense antisense A549@0.008546,AG04450@0.016811,BJ@0.0047635,GM12878@0,H1HESC@0,HELAS3@0.023016,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0.042185,K562@0,MCF7@0,NHEK@0.002513,NHLF@0.0114375,SKNSHRA@0.0445255, 0 0 0 0 ENSG00000244040.1 ENST00000497452.1 chr3:159631189-159924879 10 2415 291257 exonic 5.87 0 0,0,0 0 0,0,0 0 4.6098737541072 180.268 4.9287784679089 5.83045901042722 148.722 8.3776397515528 24.9268206429373 121.558 0 0 chimp,human,macaque,marmoset,orangutan, lincRNA processed_transcript A549@0.00381,AG04450@0.0171485,BJ@0.000998,GM12878@0,H1HESC@0,HELAS3@0.0027955,HEPG2@0.001757,HMEC@0.005066,HSMM@0.0070625,HUVEC@0.0024545,K562@0,MCF7@0,NHEK@0.00108767,NHLF@0.022368,SKNSHRA@0, 0 0 0 0 ENSG00000244040.1 ENST00000462431.1 chr3:159715961-159733648 5 983 16696 intergenic -1.49 0 0,0,0 0 0,0,0 0 0 0 5.49338758901323 0.305282702443699 4.845 21.1383519837233 2.20220412074748 12.915 0 0 chimp,human,macaque,marmoset,orangutan, lincRNA processed_transcript A549@0.00381,AG04450@0.0171485,BJ@0.000998,GM12878@0,H1HESC@0,HELAS3@0.0027955,HEPG2@0.001757,HMEC@0.005066,HSMM@0.0070625,HUVEC@0.0024545,K562@0,MCF7@0,NHEK@0.00108767,NHLF@0.022368,SKNSHRA@0, 0 0 0 0 ENSG00000244040.1 ENST00000486168.1 chr3:159924296-159943086 4 534 18250 intergenic -2.57 1 0,1,0 0 0,0,0 17.2153558052434 21.8733150684931 278.811 46.1217228464419 24.8080547945205 358.376 51.8014981273408 25.7077260273973 362.629 0 0 cat,chimp,dog,guinea_pig,horse,human,macaque,orangutan,panda,rabbit,rat, lincRNA processed_transcript A549@0.00381,AG04450@0.0171485,BJ@0.000998,GM12878@0,H1HESC@0,HELAS3@0.0027955,HEPG2@0.001757,HMEC@0.005066,HSMM@0.0070625,HUVEC@0.0024545,K562@0,MCF7@0,NHEK@0.00108767,NHLF@0.022368,SKNSHRA@0, 0 0 0 0 ENSG00000240567.1 ENST00000473595.1 chr3:161144215-161166030 4 2841 18968 intergenic 0.71 0 0,0,1 0 0,0,0 17.8599084829285 9.77066638549135 0 22.3653643083421 15.384753268663 0 33.4934882083773 20.4268241248418 0 0 0 chimp,human, lincRNA processed_transcript A549@0.03384,AG04450@0.0015755,BJ@0.001716,GM12878@0.0621155,H1HESC@0.06025,HELAS3@0.00532,HEPG2@0.0030115,HMEC@0,HSMM@0,HUVEC@0.007371,K562@0.008711,MCF7@0.419072,NHEK@0.005651,NHLF@0,SKNSHRA@0.0051475, 0 0 0 0 ENSG00000240354.1 ENST00000497285.1 chr3:161534697-161539696 2 481 4516 intergenic -3.68 0 0,0,0 0 0,0,0 275.176715176715 6.64371124889283 120.296 294.823284823285 17.0801594331267 153.431 314.592515592516 19.3976970770593 167.382 0 0 chimp,cow,dog,guinea_pig,horse,human,macaque,opossum,orangutan,panda,pig,rabbit, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0.009411, 0 0 0 0 ENSG00000241168.1 ENST00000490357.1 chr3:162744184-162949937 5 1829 203916 intergenic 1.20 1 0,0,0 0 0,0,0 0 1.86302202867848 0 0 2.91772102238176 0 0 6.97715726083289 0 0 0 chimp,dog,human,macaque,marmoset,orangutan,panda, processed_transcript processed_transcript A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0.001131,HELAS3@0.001232,HEPG2@0,HMEC@0,HSMM@0.001122,HUVEC@0,K562@0,MCF7@0.009891,NHEK@0,NHLF@0,SKNSHRA@0, 80 2 0 0 ENSG00000241369.1 ENST00000488287.1 chr3:162845711-162900698 3 427 54556 intergenic 4.19 0 0,0,0 0 0,0,0 0 1.53136226996114 0 0 1.34271207566537 0 0 1.59456338441235 0 0 0 chimp,human,marmoset,orangutan, lincRNA lincRNA A549@0.0033765,AG04450@0,BJ@0.007526,GM12878@0.0071505,H1HESC@0.001629,HELAS3@0.35309,HEPG2@0.100705,HMEC@0,HSMM@0.0073895,HUVEC@0,K562@0.213163,MCF7@0.010593,NHEK@0,NHLF@0,SKNSHRA@0.0036615, 0 0 0 0 ENSG00000241369.1 ENST00000470546.1 chr3:162895031-163021089 7 1512 124534 intergenic 4.19 1 0,0,1 0 0,0,0 0 0.851630879920343 0 0 1.5097242520115 0 0 4.31807377904829 0 0 0 chimp,dog,horse,human,macaque,marmoset,orangutan,panda, lincRNA lincRNA A549@0.0033765,AG04450@0,BJ@0.007526,GM12878@0.0071505,H1HESC@0.001629,HELAS3@0.35309,HEPG2@0.100705,HMEC@0,HSMM@0.0073895,HUVEC@0,K562@0.213163,MCF7@0.010593,NHEK@0,NHLF@0,SKNSHRA@0.0036615, 0 0 0 0 ENSG00000241369.1 ENST00000474168.1 chr3:162917363-162937929 5 542 20016 intergenic -13.43 0 0,0,0 0 0,0,0 0 2.27807753796962 0 0 5.21507793764988 0 0 9.17311151079137 0 0 0 chimp,dog,human,macaque,marmoset,orangutan, lincRNA lincRNA A549@0.0033765,AG04450@0,BJ@0.007526,GM12878@0.0071505,H1HESC@0.001629,HELAS3@0.35309,HEPG2@0.100705,HMEC@0,HSMM@0.0073895,HUVEC@0,K562@0.213163,MCF7@0.010593,NHEK@0,NHLF@0,SKNSHRA@0.0036615, 0 0 0 0 ENSG00000241369.1 ENST00000494897.1 chr3:162917363-163021076 7 729 102972 intergenic -3.56 0 0,0,0 0 0,0,0 0 0.442819407217496 0 0 1.29734296702016 0 0 2.50283572233228 0 0 0 chimp,cow,dog,horse,human,macaque,marmoset,orangutan,panda, lincRNA lincRNA A549@0.0033765,AG04450@0,BJ@0.007526,GM12878@0.0071505,H1HESC@0.001629,HELAS3@0.35309,HEPG2@0.100705,HMEC@0,HSMM@0.0073895,HUVEC@0,K562@0.213163,MCF7@0.010593,NHEK@0,NHLF@0,SKNSHRA@0.0036615, 0 0 0 0 ENSG00000241369.1 ENST00000492553.1 chr3:162917365-163021110 8 828 102903 intergenic 0.29 0 0,0,0 0 0,0,0 0 0.443116332857157 0 0 1.29821288009096 0 0 2.5045139597485 0 0 0 chimp,cow,dog,horse,human,macaque,marmoset,orangutan,panda, lincRNA lincRNA A549@0.0033765,AG04450@0,BJ@0.007526,GM12878@0.0071505,H1HESC@0.001629,HELAS3@0.35309,HEPG2@0.100705,HMEC@0,HSMM@0.0073895,HUVEC@0,K562@0.213163,MCF7@0.010593,NHEK@0,NHLF@0,SKNSHRA@0.0036615, 0 0 0 0 ENSG00000241369.1 ENST00000462928.1 chr3:162917366-162996361 6 578 78407 intergenic -2.63 1 0,0,0 0 0,0,0 0 0.581555218284082 0 0 1.65348757126277 0 0 2.76472763911386 0 0 0 chimp,human,macaque,marmoset,orangutan,rabbit, lincRNA lincRNA A549@0.0033765,AG04450@0,BJ@0.007526,GM12878@0.0071505,H1HESC@0.001629,HELAS3@0.35309,HEPG2@0.100705,HMEC@0,HSMM@0.0073895,HUVEC@0,K562@0.213163,MCF7@0.010593,NHEK@0,NHLF@0,SKNSHRA@0.0036615, 0 0 0 0 ENSG00000241369.1 ENST00000489012.1 chr3:162917411-163079351 8 810 161116 intergenic -2.63 1 0,0,0 0 0,0,0 0 0.723565629732615 0 0 1.47133742148514 0 0 3.17316095235731 0 0 0 chimp,dog,horse,human,macaque,marmoset,orangutan, lincRNA lincRNA A549@0.0033765,AG04450@0,BJ@0.007526,GM12878@0.0071505,H1HESC@0.001629,HELAS3@0.35309,HEPG2@0.100705,HMEC@0,HSMM@0.0073895,HUVEC@0,K562@0.213163,MCF7@0.010593,NHEK@0,NHLF@0,SKNSHRA@0.0036615, 0 0 0 0 ENSG00000241369.1 ENST00000488173.1 chr3:162936848-163021105 5 498 83751 intergenic -3.56 0 0,0,0 0 0,0,0 0 0 0 0 0.34871225418204 0 0 0.884920777065349 0 0 0 chimp,human,macaque,orangutan, lincRNA lincRNA A549@0.0033765,AG04450@0,BJ@0.007526,GM12878@0.0071505,H1HESC@0.001629,HELAS3@0.35309,HEPG2@0.100705,HMEC@0,HSMM@0.0073895,HUVEC@0,K562@0.213163,MCF7@0.010593,NHEK@0,NHLF@0,SKNSHRA@0.0036615, 0 0 0 0 ENSG00000241369.1 ENST00000493473.1 chr3:162937704-163021103 4 564 82829 intergenic -3.56 1 0,0,0 0 0,0,0 0 0 0 0 0.352593898272344 0 0 0.894771155030243 0 0 0 chimp,horse,human,macaque,orangutan, lincRNA lincRNA A549@0.0033765,AG04450@0,BJ@0.007526,GM12878@0.0071505,H1HESC@0.001629,HELAS3@0.35309,HEPG2@0.100705,HMEC@0,HSMM@0.0073895,HUVEC@0,K562@0.213163,MCF7@0.010593,NHEK@0,NHLF@0,SKNSHRA@0.0036615, 0 0 0 0 ENSG00000240792.1 ENST00000477099.1 chr3:163192855-163197153 2 747 3549 intergenic -4.90 0 0,0,0 0 0,0,0 0 0 41.1 0 2.83178360101437 96.961 0 9.92166807551423 111.508 0 0 chimp,human,macaque,orangutan, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0.49798,HEPG2@0.065553,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000241636.1 ENST00000486767.1 chr3:164388666-164403864 4 572 14620 intergenic 4.33 0 0,0,0 0 0,0,0 0 0 0 0 2.46580027359781 0 0 2.7093023255814 0 0 0 chimp,human,macaque,marmoset,orangutan, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0.007878, 0 0 0 0 ENSG00000241767.2 ENST00000463978.1 chr3:164431883-164448824 2 551 16388 intergenic 2.24 0 0,0,0 0 0,0,0 62.6134301270417 0 36.75 43.1796733212341 0.372223578227972 26.071 45.3012704174229 0.504515499145716 26.368 0 0 chimp,cow,dog,elephant,horse,human,macaque,marmoset,mouse,opossum,orangutan,pig,rabbit,rat, lincRNA lincRNA A549@0.003925,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000241767.2 ENST00000497379.2 chr3:164431889-164549268 4 834 116539 intergenic -0.99 0 0,0,0 0 0,0,0 43.1654676258993 1.97644565338642 0 28.5275779376499 5.19246775757472 0 29.9292565947242 6.69457434850136 0 0 0 chimp,cow,dog,elephant,guinea_pig,horse,human,macaque,marmoset,mouse,orangutan,pig,rabbit,rat, lincRNA lincRNA A549@0.003925,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000239205.1 ENST00000472120.1 chr3:164867794-164875850 2 1946 6108 intergenic -3.53 0 0,0,0 0 0,0,0 0 0 0 0 1.15389652914211 0 0 1.68352979698756 3.645 0 0 chimp,human,macaque,marmoset,orangutan,pig, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000244128.1 ENST00000470138.1 chr3:164924748-165298816 4 573 373489 intergenic -1.89 0 0,0,0 0 0,0,0 0 2.02083863246307 0 23.2513089005236 4.90753409069611 11.737 24.783595113438 6.49534524443825 16.94 0 0 cat,chimp,cow,dog,elephant,guinea_pig,horse,human,macaque,marmoset,mouse,orangutan,pig,rabbit,rat, lincRNA lincRNA A549@0.869824,AG04450@0.008164,BJ@0,GM12878@4.22295,H1HESC@0.0051695,HELAS3@0.414678,HEPG2@0.08721,HMEC@0.130912,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@6.10197,NHLF@0.003427,SKNSHRA@0, 0 0 0 0 ENSG00000244128.1 ENST00000498616.1 chr3:164924750-165209054 4 559 283739 intergenic -1.89 0 0,0,0 0 0,0,0 0 1.70845389601007 0 23.8336314847943 4.55629997991112 11.737 24.5348837209302 6.47670922925646 17.426 0 0 chimp,cow,dog,elephant,horse,human,macaque,mouse,orangutan,pig,rabbit, lincRNA lincRNA A549@0.869824,AG04450@0.008164,BJ@0,GM12878@4.22295,H1HESC@0.0051695,HELAS3@0.414678,HEPG2@0.08721,HMEC@0.130912,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@6.10197,NHLF@0.003427,SKNSHRA@0, 0 0 0 0 ENSG00000244128.1 ENST00000494915.1 chr3:164924769-165178321 5 589 252955 intergenic 3.14 0 0,0,0 0 0,0,0 0 1.47472475341464 0 38.7249575551783 4.03618825482793 11.737 36.5483870967742 6.27510426755747 19.613 0 0 cat,chimp,cow,dog,elephant,guinea_pig,horse,human,macaque,marmoset,mouse,orangutan,panda,pig,rabbit,rat, lincRNA lincRNA A549@0.869824,AG04450@0.008164,BJ@0,GM12878@4.22295,H1HESC@0.0051695,HELAS3@0.414678,HEPG2@0.08721,HMEC@0.130912,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@6.10197,NHLF@0.003427,SKNSHRA@0, 0 0 0 0 ENSG00000244128.1 ENST00000496693.1 chr3:165266626-165373211 6 1069 105506 intergenic -2.18 0 0,0,0 0 0,0,0 0 0 0 0 1.85686122116278 0 0 2.19655754175118 0 0 0 chimp,horse,human,macaque,marmoset,orangutan, lincRNA lincRNA A549@0.869824,AG04450@0.008164,BJ@0,GM12878@4.22295,H1HESC@0.0051695,HELAS3@0.414678,HEPG2@0.08721,HMEC@0.130912,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@6.10197,NHLF@0.003427,SKNSHRA@0, 0 0 0 0 ENSG00000244321.1 ENST00000495159.1 chr3:166287481-166288551 2 753 315 intergenic -1.51 0 0,0,0 0 0,0,0 11.9123505976096 9.49206349206349 0 15.7636122177955 48.3301587301587 0 24.804780876494 74.4190476190476 0 0 0 chimp,cow,dog,elephant,guinea_pig,horse,human,macaque,mouse,opossum,orangutan,panda,rabbit,rat, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0.0124185,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0.059214,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000240033.1 ENST00000496403.1 chr3:166552809-166562744 2 787 9146 intergenic -12.78 0 0,0,0 0 0,0,0 0 0 0 0 0.33457249070632 0 0 1.41045265689919 0 0 0 NA lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0.135428,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0.0154045,NHEK@0.003339,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000241669.1 ENST00000498413.1 chr3:167110584-167126307 4 531 15186 intergenic 0.06 0 0,0,0 0 0,0,0 9.05273069679849 5.89470564994073 0 10.3954802259887 16.1671934676676 0 13.1732580037665 18.3381403924667 0 0 0 chimp,cow,human,macaque,marmoset, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000242924.1 ENST00000463642.1 chr3:167582561-167594705 2 455 11687 intergenic 0.16 0 0,0,0 0 0,0,0 0 0 0 0 2.1820826559425 2.646 0 2.58184307350047 2.7 0 0 cat,chimp,cow,dog,horse,human,macaque,orangutan,panda,pig,rabbit, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0.122804,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000244214.1 ENST00000464514.1 chr3:167582637-167584402 2 558 1205 intergenic -6.45 1 0,0,1 0 0,0,0 0 0 0 0 0 2.646 0 0 2.7 0 0 chimp,cow,dog,elephant,guinea_pig,horse,human,macaque,marmoset,mouse,orangutan,panda,pig,rabbit,rat, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000244706.2 ENST00000470523.2 chr3:167584288-167588765 3 555 3918 intergenic 0.28 0 0,1,1 0 0,0,0 0 0 0 6.32432432432432 0.805513016845329 0 6.76936936936937 0.85145482388974 0 0 0 cat,chimp,cow,dog,elephant,guinea_pig,horse,human,macaque,marmoset,mouse,orangutan,panda,pig,rabbit,rat, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000240292.1 ENST00000475324.1 chr3:167584423-167601170 7 654 16081 intergenic 1.57 1 0,0,1 0 0,0,0 0 0 0 5.36697247706422 5.27485852869846 0 5.74464831804281 6.63752254213046 0 0 0 cat,chimp,cow,dog,elephant,horse,human,macaque,marmoset,orangutan,panda,pig,rabbit, lincRNA lincRNA A549@0.003284,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000244227.1 ENST00000481578.1 chr3:167613736-167641799 7 2343 25708 intergenic -1.26 1 0,0,0 0 0,0,0 33.3448570209134 104.362844250817 14.306 83.830985915493 14.6114828069084 27.295 95.8305591122492 16.2801851563716 32.806 0 0 cat,chimp,cow,dog,horse,human,macaque,marmoset,mouse,orangutan,panda,pig,rabbit, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000244227.1 ENST00000459923.1 chr3:167613744-167640761 8 1626 25377 intergenic -1.26 0 0,0,0 0 0,0,0 64.7416974169742 84.7740079599637 16.794 134.258302583026 12.8287031564015 27.295 143.627921279213 14.7213618631044 32.806 0 0 cat,chimp,cow,dog,elephant,guinea_pig,horse,human,macaque,marmoset,opossum,orangutan,panda,pig,rabbit, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000244227.1 ENST00000490897.1 chr3:167613755-167632427 5 624 18040 intergenic 1.15 1 0,0,0 0 0,0,0 37.2275641025641 4.34417960088692 19.282 154.333333333333 7.92821507760532 27.295 184.376602564103 9.3470066518847 32.806 0 0 cat,chimp,cow,dog,elephant,guinea_pig,horse,human,macaque,marmoset,mouse,opossum,orangutan,panda,pig,rabbit,rat, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000244227.1 ENST00000494887.1 chr3:167621115-167632819 4 534 11164 intergenic -0.01 0 0,0,0 0 0,0,0 38.3333333333333 2.53269437477607 0 142.286516853933 4.8686850591186 2.868 181.775280898876 5.89000358294518 4.704 0 0 chimp,dog,elephant,guinea_pig,horse,human,macaque,marmoset,mouse,opossum,orangutan,panda,pig,rabbit, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000244227.1 ENST00000469060.1 chr3:167621186-167640430 4 486 18752 intergenic -2.47 1 0,0,0 0 0,0,0 42.119341563786 12.2902090443686 0 71.1584362139918 19.9137158703072 2.868 87.1111111111111 21.93232721843 5.433 0 0 cat,chimp,cow,dog,elephant,guinea_pig,horse,human,macaque,marmoset,orangutan,panda,pig,rabbit, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000244227.1 ENST00000493529.1 chr3:167632847-167638537 3 433 5253 intergenic -5.98 1 0,0,0 0 0,0,0 134.528868360277 27.2764134780126 0 222.519630484988 39.351798972016 1.044 208.394919168591 44.108890158005 3.486 0 0 cat,chimp,dog,elephant,horse,human,macaque,marmoset,mouse,opossum,orangutan,pig, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000244227.1 ENST00000496891.1 chr3:167632927-167640418 4 550 6935 intergenic -2.47 1 0,0,0 0 0,0,0 42.3563636363636 50.8324441240086 26.572 56.8963636363636 33.2399423215573 42.804 64.0454545454545 35.7316510454218 42.756 0 0 cat,chimp,horse,human,macaque,marmoset,orangutan,rabbit, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000241882.1 ENST00000496247.1 chr3:168006341-168009016 2 543 2130 intergenic 0 0 0,0,0 0 0,0,0 131.307550644567 83.2234741784037 19.018 218.26335174954 145.016431924883 103.363 199.235727440147 140.979342723005 76.469 0 0 cat,chimp,cow,dog,elephant,horse,human,macaque,marmoset,mouse,orangutan,panda,rabbit,rat, processed_transcript processed_transcript A549@0,AG04450@0.0009185,BJ@0,GM12878@0.055022,H1HESC@0.004078,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0.0012005, 0 0 0 0 ENSG00000242268.1 ENST00000484765.1 chr3:168619733-168639784 5 740 19303 intergenic 8.24 1 0,0,0 0 0,0,0 0 16.4624151686266 53.199 5.82162162162162 28.595192457131 121.025 29.1621621621622 32.1870693674558 119.224 0 0 chimp,cow,dog,elephant,horse,human,macaque,marmoset,orangutan,panda,pig,rabbit, lincRNA lincRNA A549@0,AG04450@0.027825,BJ@0.0206795,GM12878@2.20058,H1HESC@0.076193,HELAS3@0.007125,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0.013677,NHEK@0,NHLF@0.0568655,SKNSHRA@0.104871, 0 0 0 0 ENSG00000241383.1 ENST00000494900.1 chr3:168720862-168723254 2 427 1963 intergenic -0.57 1 0,0,1 0 0,0,0 0 4.74834437086093 173.218 0 26.4554253693327 294.686 0 46.0738665308202 291.305 0 0 chimp,cow,horse,human,macaque,marmoset,orangutan, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0.0047925,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000241479.1 ENST00000480669.1 chr3:169165655-169194840 5 530 28647 intronic -3.54 0 0,0,1 0 0,0,0 0 92.4358920654868 0 26.7150943396226 138.978776137117 0 11.5981132075472 148.322337417531 0 0 0 chimp,cow,dog,horse,human,macaque,marmoset,orangutan,panda,pig,rabbit, antisense antisense A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0.0043685,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000242795.2 ENST00000469794.1 chr3:169331298-169341739 3 510 9927 intronic -9.52 0 0,1,0 0 0,0,0 42.4 14.3252745038783 0 128.439215686275 52.5339981867634 207.685 110.972549019608 49.7767704240959 180.593 0 0 cat,chimp,cow,dog,elephant,horse,human,macaque,marmoset,orangutan,panda,pig,rabbit, sense_intronic sense_intronic A549@0,AG04450@0.007267,BJ@0,GM12878@0,H1HESC@0,HELAS3@0.0597855,HEPG2@0.115599,HMEC@0,HSMM@0,HUVEC@1.35574,K562@0,MCF7@0.188367,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000239219.1 ENST00000487580.1 chr3:169657141-169684028 2 498 26387 intergenic -7.63 1 0,0,0 0 0,0,0 0 3.05832417478304 39.42 6.23895582329317 4.07268730814416 73.319 6.55220883534137 32.2219274642817 62.272 0 0 chimp,cow,human,macaque,marmoset,orangutan,rabbit, processed_transcript processed_transcript A549@0.005573,AG04450@0.01212,BJ@0.021243,GM12878@0.234636,H1HESC@0.0455835,HELAS3@0.0241275,HEPG2@0.0157135,HMEC@0.009857,HSMM@0.011237,HUVEC@0.00986,K562@0.047122,MCF7@0.0007445,NHEK@0.0116793,NHLF@0.005567,SKNSHRA@0.046799, 0 0 0 0 ENSG00000239219.1 ENST00000483289.1 chr3:169661772-169684014 2 5521 16719 intergenic 11.27 0 0,0,0 0 0,0,0 14.6169172251404 0 39.42 9.30447382720522 2.77337161313476 73.319 137.017931534142 5.01752497158921 62.272 0 0 chimp,human,macaque,orangutan, processed_transcript processed_transcript A549@0.005573,AG04450@0.01212,BJ@0.021243,GM12878@0.234636,H1HESC@0.0455835,HELAS3@0.0241275,HEPG2@0.0157135,HMEC@0.009857,HSMM@0.011237,HUVEC@0.00986,K562@0.047122,MCF7@0.0007445,NHEK@0.0116793,NHLF@0.005567,SKNSHRA@0.046799, 0 0 0 0 ENSG00000239219.1 ENST00000469301.1 chr3:169672015-169684522 2 1736 10769 intergenic -0.29 1 0,1,1 0 0,0,0 10.8640552995392 0 48.65 4.82546082949309 3.60739158696258 83.898 4.9418202764977 6.56189061194168 74.586 0 0 chimp,horse,human,macaque,orangutan, processed_transcript processed_transcript A549@0.005573,AG04450@0.01212,BJ@0.021243,GM12878@0.234636,H1HESC@0.0455835,HELAS3@0.0241275,HEPG2@0.0157135,HMEC@0.009857,HSMM@0.011237,HUVEC@0.00986,K562@0.047122,MCF7@0.0007445,NHEK@0.0116793,NHLF@0.005567,SKNSHRA@0.046799, 0 0 0 0 ENSG00000240373.1 ENST00000479626.1 chr3:169696324-169703503 2 344 6833 intronic 0 0 0,0,0 0 0,0,0 0 19.4444607054003 39.037 0 29.3865066588614 57.592 0 30.1703497731597 56.53 0 0 chimp,human,macaque,marmoset,orangutan, antisense antisense A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000239628.1 ENST00000466291.1 chr3:170063466-170071749 2 467 7814 intergenic -6.13 0 0,1,0 0 0,0,0 0 9.0621960583568 0 15.7558886509636 14.1371896595854 3.585 30.2826552462527 16.6224724852828 4.016 0 0 cat,chimp,human,macaque,marmoset,orangutan,pig, lincRNA lincRNA A549@0,AG04450@0.0050215,BJ@0,GM12878@0,H1HESC@0,HELAS3@0.0392045,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0.005237,MCF7@0.004287,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000242578.1 ENST00000468232.1 chr3:170128300-170136403 4 660 7437 intergenic -0.44 0 0,0,0 0 0,0,0 0 0 0 22.5924242424242 0.567433104746538 1.84 22.9727272727273 0.613688315180853 4.921 0 0 chimp,horse,human,macaque,marmoset,orangutan,rabbit, lincRNA lincRNA A549@0.085236,AG04450@0.0347565,BJ@0.024452,GM12878@0.0088085,H1HESC@0.0313295,HELAS3@0.0417705,HEPG2@0,HMEC@0,HSMM@0.003099,HUVEC@0.13718,K562@0.004105,MCF7@0.149408,NHEK@0.0567533,NHLF@0.0175005,SKNSHRA@0.0634365, 0 0 0 0 ENSG00000244738.1 ENST00000497988.1 chr3:170374351-170379912 2 3095 2464 intronic 3.40 1 0,0,1 0 0,0,0 0 0 0 1.23554119547658 0 2.232 1.29757673667205 0.667613636363636 2.385 0 0 chimp,human,macaque,marmoset, sense_intronic sense_intronic A549@0,AG04450@0.0455,BJ@0.002536,GM12878@0,H1HESC@0.010463,HELAS3@0.006581,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0.0281925,K562@0.0004015,MCF7@0,NHEK@0,NHLF@0.000708,SKNSHRA@0.010667, 0 0 0 0 ENSG00000239739.1 ENST00000473110.1 chr3:170458140-170459154 2 261 751 intronic -3.33 1 0,1,0 0 0,0,0 0 0 0 0 0 0 0 0 8.262 0 0 chimp,horse,human,macaque,marmoset,orangutan, lincRNA lincRNA A549@0,AG04450@0.0910395,BJ@0.009361,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0.050317,HUVEC@0,K562@0,MCF7@0,NHEK@0.044613,NHLF@0.066688,SKNSHRA@0, 0 0 0 0 ENSG00000240497.2 ENST00000467896.2 chr3:171185873-171187422 2 227 1320 intergenic -2.41 0 0,0,0 0 0,0,0 0 6.95151515151515 0 0 4.58257575757576 0 0 6.0280303030303 0 0 0 cat,chimp,elephant,horse,human,macaque,marmoset,orangutan,pig,rabbit, lincRNA lincRNA A549@0.0120615,AG04450@0,BJ@0.0530205,GM12878@0.15067,H1HESC@0.0216115,HELAS3@0.009867,HEPG2@0,HMEC@0.01788,HSMM@0,HUVEC@0,K562@0.179573,MCF7@0,NHEK@0.017079,NHLF@0.076495,SKNSHRA@0.039648, 0 0 0 0 ENSG00000234717.1 ENST00000449106.1 chr3:171594142-171618530 3 424 23960 intergenic -3.88 0 0,0,1 0 0,0,0 0 12.6303839732888 0 0 26.4003338898164 0 0 28.0967028380634 0 0 0 chimp,horse,human,macaque,marmoset,orangutan,panda,rabbit, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0.049685,HEPG2@0.041169,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000235943.1 ENST00000456146.1 chr3:171612226-171613030 2 468 334 intergenic -4.93 1 0,0,0 0 0,0,0 0 0 0 0 0 1.673 7.92735042735043 0 1.701 0 0 cat,chimp,cow,dog,elephant,guinea_pig,horse,human,macaque,marmoset,orangutan,panda,pig,rabbit, sense_intronic sense_intronic A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0.0041625,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000228676.3 ENST00000427116.3 chr3:171758836-171760763 2 1891 34 intronic 4.08 0 0,1,1 0 0,0,0 118.226335272343 0 0 131.67424643046 0 8.748 126.922263352723 0 12.529 0 0 cat,chimp,cow,elephant,horse,human,macaque,marmoset,orangutan,pig,rabbit, lincRNA lincRNA A549@0.0136855,AG04450@0.005775,BJ@0,GM12878@0.00309,H1HESC@0,HELAS3@0.002804,HEPG2@0.0030955,HMEC@0,HSMM@0,HUVEC@0.0028215,K562@0,MCF7@0,NHEK@0.00139167,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000223387.2 ENST00000441185.2 chr3:172278678-172313217 3 325 34210 intergenic 0.82 0 0,0,0 0 0,0,0 0 0.418018650062849 0 0 0.981817650325938 0 0 4.65073518664679 0 0 0 chimp,horse,human,macaque,marmoset,orangutan, lincRNA lincRNA A549@0.004832,AG04450@0.000698,BJ@0.0010075,GM12878@0.022468,H1HESC@0,HELAS3@0.023646,HEPG2@0.0499855,HMEC@0,HSMM@0.001281,HUVEC@0.0291135,K562@0.0008335,MCF7@0.002532,NHEK@0.021866,NHLF@0.0030375,SKNSHRA@0.002512, 0 0 0 0 ENSG00000223387.2 ENST00000424941.2 chr3:172278691-172313397 4 559 34141 intergenic 0.82 0 0,0,0 0 0,0,0 0 0.418851234585982 0 0 0.983773175946809 0 0 4.65999824258223 0 1 1 chimp,human,macaque,marmoset,orangutan, lincRNA lincRNA A549@0.004832,AG04450@0.000698,BJ@0.0010075,GM12878@0.022468,H1HESC@0,HELAS3@0.023646,HEPG2@0.0499855,HMEC@0,HSMM@0.001281,HUVEC@0.0291135,K562@0.0008335,MCF7@0.002532,NHEK@0.021866,NHLF@0.0030375,SKNSHRA@0.002512, 0 0 0 0 ENSG00000223387.2 ENST00000418839.2 chr3:172308503-172312460 2 3210 745 intergenic 2.57 0 0,0,0 0 0,0,0 0 0 0 0 0 0 0 0 0 1 1 chimp,human,macaque,marmoset,orangutan, lincRNA lincRNA A549@0.004832,AG04450@0.000698,BJ@0.0010075,GM12878@0.022468,H1HESC@0,HELAS3@0.023646,HEPG2@0.0499855,HMEC@0,HSMM@0.001281,HUVEC@0.0291135,K562@0.0008335,MCF7@0.002532,NHEK@0.021866,NHLF@0.0030375,SKNSHRA@0.002512, 0 0 0 0 ENSG00000237473.1 ENST00000447709.1 chr3:172871527-173054755 5 465 182755 intergenic 3.03 0 0,0,0 0 0,0,0 0 6.06479713277338 0 0 9.60635276736615 0 0 11.3122376952751 10.692 0 0 chimp,human,macaque,marmoset,orangutan, lincRNA lincRNA A549@0,AG04450@0,BJ@0.0137705,GM12878@0,H1HESC@0.004414,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000228213.1 ENST00000423873.1 chr3:173628288-173638586 4 811 9481 intronic -1.00 0 0,0,1 0 0,0,0 0 32.9621347959076 23.03 0 53.3470098090919 2.232 0 53.1283619871322 3.743 0 0 cat,chimp,dog,elephant,horse,human,macaque,marmoset,orangutan,panda,rabbit, antisense antisense A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000228213.1 ENST00000457192.1 chr3:173628426-173638448 3 464 9554 intronic -1.00 0 0,0,0 0 0,0,0 0 32.7102784174168 23.03 0 52.9393971111576 2.232 0 52.7224199288256 3.743 0 0 cat,chimp,dog,horse,human,macaque,marmoset,orangutan,panda, antisense antisense A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000230292.1 ENST00000453180.1 chr3:174797097-174833032 4 409 35520 intronic -4.72 0 0,0,0 0 0,0,0 0 24.2869369369369 0 0 36.2054898648649 3.968 0 35.4617117117117 4.144 0 0 chimp,dog,horse,human,macaque,marmoset,orangutan,pig, antisense antisense A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000230292.1 ENST00000436929.1 chr3:174797102-174830390 3 352 32932 intronic -4.72 1 0,0,0 0 0,0,0 0 26.1955544758897 0 0 39.0507409206851 0 0 38.2485120855095 0 0 0 chimp,horse,human,macaque,marmoset,orangutan,panda,pig, antisense retained_intron A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000226779.1 ENST00000424690.1 chr3:174952651-174988885 3 1035 35195 intronic 1.23 0 0,1,0 0 0,0,0 0 13.7359568120472 0 2.07826086956522 15.0076999573803 2.151 2.18260869565217 17.203153857082 2.259 0 0 cat,chimp,cow,dog,elephant,guinea_pig,horse,human,macaque,marmoset,orangutan,panda,pig,rabbit, antisense antisense A549@0.006498,AG04450@0,BJ@0.0046625,GM12878@66.1309,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0.0190597,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000225552.1 ENST00000426315.1 chr3:175490933-175494121 3 801 2383 intronic -3.12 0 0,0,1 0 0,0,0 0 0 0 0 11.9433487201007 0 0 19.7221989089383 0 0 0 cat,chimp,cow,dog,elephant,horse,human,macaque,marmoset,mouse,orangutan,panda,pig,rabbit, antisense antisense A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000223715.1 ENST00000434969.1 chr3:176321931-176353320 3 824 30561 intergenic 2.40 0 0,0,0 0 0,0,0 0 12.7678086450051 0 0 18.1465593403357 23.15 0 20.9314812996957 29.589 0 0 chimp,dog,elephant,guinea_pig,human,macaque,marmoset,orangutan,panda, lincRNA lincRNA A549@0,AG04450@0.0056955,BJ@0.0205175,GM12878@0.0024375,H1HESC@0.022687,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0.002488,HUVEC@0.0188475,K562@0,MCF7@0.012431,NHEK@0.0223837,NHLF@0,SKNSHRA@0.024443, 0 0 0 0 ENSG00000223715.1 ENST00000421034.1 chr3:176344067-176352245 3 323 7851 intergenic -4.66 0 0,0,0 0 0,0,0 0 7.3916698509744 0 0 27.1136160998599 0 0 36.2716851356515 0 0 0 cat,chimp,dog,horse,human,macaque,marmoset,mouse,orangutan,panda,rabbit, lincRNA lincRNA A549@0,AG04450@0.0056955,BJ@0.0205175,GM12878@0.0024375,H1HESC@0.022687,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0.002488,HUVEC@0.0188475,K562@0,MCF7@0.012431,NHEK@0.0223837,NHLF@0,SKNSHRA@0.024443, 0 0 0 0 ENSG00000232461.1 ENST00000428516.1 chr3:176361729-176585626 5 673 223216 intergenic -1.80 0 0,0,0 0 0,0,0 35.6612184249629 10.7043625904953 0 52.9583952451709 14.6710137266146 0 62.5468053491828 20.1202646763673 0 0 0 cat,chimp,cow,dog,guinea_pig,horse,human,macaque,marmoset,orangutan,panda,pig,rabbit, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000228308.1 ENST00000451289.1 chr3:176531943-176534789 2 2398 446 intergenic 4.95 1 0,0,0 0 0,0,0 23.1526271893244 0 0 15.4870725604671 71.2488789237668 0 26.2810675562969 94.7645739910314 0 0 0 cat,chimp,human,macaque,marmoset,orangutan,panda, lincRNA lincRNA A549@0,AG04450@0.000934,BJ@0,GM12878@0,H1HESC@0.019684,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0.002251,MCF7@0.003837,NHEK@0.00451433,NHLF@0,SKNSHRA@0.003438, 0 0 0 0 ENSG00000231310.2 ENST00000454723.2 chr3:176762649-176765711 2 412 2648 intronic -6.73 0 0,0,0 0 0,0,0 0 42.59410430839 0 0 55.4338624338624 0 0 60.8352229780801 0 0 0 chimp,elephant,human,macaque,marmoset,orangutan,pig, antisense antisense A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0.0143565,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0.006467,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000245372.1 ENST00000500519.1 chr3:176908453-176912093 2 2168 1470 intronic 3.61 0 0,0,1 0 0,0,0 17.2094095940959 0 0 13.9833948339483 0 1.38 20.90036900369 0 1.458 0 1 human,marmoset,orangutan, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000203645.2 ENST00000425388.1 chr3:177012230-177041206 2 2044 26930 intergenic 5.84 0 0,0,1 0 0,0,0 0 0.3501670998886 0 1.09197651663405 5.18770887486075 0 3.68542074363992 35.2277385815076 0 0 0 chimp,human,orangutan, lincRNA lincRNA A549@0.0642555,AG04450@0.020253,BJ@0.0071375,GM12878@0.0022915,H1HESC@0.0096755,HELAS3@0.0061205,HEPG2@0.122875,HMEC@0,HSMM@0.026798,HUVEC@0.0034165,K562@0.009774,MCF7@0.00702,NHEK@0.00769767,NHLF@0.0113805,SKNSHRA@0.024427, 0 0 0 0 ENSG00000226782.2 ENST00000457125.1 chr3:177055416-177066954 3 519 11015 intergenic -3.08 0 0,0,0 0 0,0,0 36.364161849711 25.7423513390831 54.448 2.18111753371869 42.126100771675 59.633 3.38342967244701 41.5871992737177 60.642 0 0 chimp,guinea_pig,human,macaque,marmoset,orangutan,pig,rabbit, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0.154332,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000228221.1 ENST00000442937.1 chr3:177159709-177469882 4 608 309559 intergenic -0.86 0 0,1,0 0 0,0,0 10.5921052631579 15.7371357317991 22.168 22.9819078947368 20.2468543960925 15.496 28.1134868421053 21.9876049476836 20.711 0 0 cat,chimp,cow,elephant,guinea_pig,horse,human,macaque,marmoset,orangutan,panda,pig,rabbit, lincRNA lincRNA A549@0,AG04450@3.02008,BJ@1.99892,GM12878@0.003294,H1HESC@0,HELAS3@0.0077015,HEPG2@0,HMEC@0,HSMM@0.0566145,HUVEC@0,K562@0.0045315,MCF7@0.0294115,NHEK@0.091486,NHLF@2.04594,SKNSHRA@0.206041, 0 0 0 0 ENSG00000228221.1 ENST00000439009.1 chr3:177159752-177470093 2 540 309799 intergenic 5.02 0 0,1,0 0 0,0,0 0 15.7464743269023 22.168 0 20.2783998657194 15.496 0 22.026975555118 20.711 0 0 cat,chimp,cow,elephant,human,macaque,marmoset,orangutan,panda,pig, lincRNA lincRNA A549@0,AG04450@3.02008,BJ@1.99892,GM12878@0.003294,H1HESC@0,HELAS3@0.0077015,HEPG2@0,HMEC@0,HSMM@0.0566145,HUVEC@0,K562@0.0045315,MCF7@0.0294115,NHEK@0.091486,NHLF@2.04594,SKNSHRA@0.206041, 0 0 0 0 ENSG00000228221.1 ENST00000445673.1 chr3:177335378-177469882 3 434 134066 intergenic -4.25 0 0,0,0 0 0,0,0 14.8387096774194 16.2060850625811 0 32.1958525345622 20.3126668954097 0 46.9032258064516 22.8295093461429 3.263 0 0 cat,chimp,cow,elephant,guinea_pig,horse,human,macaque,marmoset,orangutan,panda,pig,rabbit, lincRNA lincRNA A549@0,AG04450@3.02008,BJ@1.99892,GM12878@0.003294,H1HESC@0,HELAS3@0.0077015,HEPG2@0,HMEC@0,HSMM@0.0566145,HUVEC@0,K562@0.0045315,MCF7@0.0294115,NHEK@0.091486,NHLF@2.04594,SKNSHRA@0.206041, 0 0 0 0 ENSG00000236385.1 ENST00000456755.1 chr3:177339170-177346075 3 720 6181 intergenic -2.69 0 0,0,1 0 0,0,0 0 16.0022650056625 0 0 6.30820255622068 0 0 7.29218573046433 0 0 0 chimp,horse,human,macaque,marmoset,orangutan,panda, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0.005663,HSMM@0,HUVEC@0,K562@0,MCF7@0.0085315,NHEK@0,NHLF@0,SKNSHRA@0.06854, 0 0 0 0 ENSG00000228221.1 ENST00000446548.1 chr3:177394498-177469920 2 517 74903 intergenic -3.16 0 0,0,0 0 0,0,0 0 23.6488391653205 0 20.0096711798839 28.0909843397461 0 26.7446808510638 32.1150821729437 0 0 0 cat,chimp,cow,elephant,guinea_pig,human,macaque,marmoset,orangutan,panda,pig,rabbit, lincRNA lincRNA A549@0,AG04450@3.02008,BJ@1.99892,GM12878@0.003294,H1HESC@0,HELAS3@0.0077015,HEPG2@0,HMEC@0,HSMM@0.0566145,HUVEC@0,K562@0.0045315,MCF7@0.0294115,NHEK@0.091486,NHLF@2.04594,SKNSHRA@0.206041, 0 0 0 0 ENSG00000228561.1 ENST00000423466.1 chr3:177401415-177409022 4 567 7034 intergenic 1.21 1 0,0,1 0 0,0,0 0 25.0081034972988 32.08 4.94708994708995 44.8237133920955 34.56 6.4973544973545 43.2976969007677 36.07 0 0 chimp,cow,elephant,horse,human,macaque,marmoset,orangutan,pig, lincRNA lincRNA A549@0,AG04450@0.277385,BJ@0.3443,GM12878@0,H1HESC@0,HELAS3@0.0163725,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0.03562,NHEK@0.0119633,NHLF@0.0946315,SKNSHRA@0.049978, 0 0 0 0 ENSG00000231574.1 ENST00000436078.1 chr3:177534653-177617012 3 2954 79401 intergenic 0.63 0 0,1,1 0 0,0,0 0 12.4412286998904 0 0 18.1381342804247 5.704 0 18.4317829750255 8.702 0 0 chimp,human,macaque,orangutan, lincRNA lincRNA A549@0.042848,AG04450@0.152251,BJ@0.303851,GM12878@0,H1HESC@0,HELAS3@0.002823,HEPG2@0.065135,HMEC@0.257862,HSMM@0.104131,HUVEC@0.0010065,K562@0,MCF7@1.15674,NHEK@0.0781313,NHLF@0.174574,SKNSHRA@0.113412, 0 0 0 0 ENSG00000231574.1 ENST00000434309.1 chr3:177545571-177614720 3 578 68567 intergenic -1.36 0 0,1,1 0 0,0,0 0 12.3273294733618 44.705 0 16.2567999183281 46.593 0 16.950048857322 47.399 0 0 chimp,human,macaque,orangutan, lincRNA lincRNA A549@0.042848,AG04450@0.152251,BJ@0.303851,GM12878@0,H1HESC@0,HELAS3@0.002823,HEPG2@0.065135,HMEC@0.257862,HSMM@0.104131,HUVEC@0.0010065,K562@0,MCF7@1.15674,NHEK@0.0781313,NHLF@0.174574,SKNSHRA@0.113412, 0 0 0 0 ENSG00000225790.1 ENST00000450500.1 chr3:177652611-177655450 3 557 2278 intergenic -3.95 0 0,0,0 0 0,0,0 327.253141831239 57.4275680421422 65.436 364.764811490126 61.5908691834943 61.601 376.308797127469 52.9723441615452 61.798 0 0 cat,chimp,cow,dog,guinea_pig,horse,human,macaque,marmoset,mouse,opossum,orangutan,panda,pig,rabbit,rat, lincRNA lincRNA A549@0.0098645,AG04450@0.112226,BJ@0.0909755,GM12878@0,H1HESC@0,HELAS3@0.0284355,HEPG2@0.0038045,HMEC@0,HSMM@0.0530255,HUVEC@0,K562@0,MCF7@0.050832,NHEK@0,NHLF@0.131164,SKNSHRA@0.0783055, 0 0 0 0 ENSG00000223930.1 ENST00000414475.1 chr3:177919838-178103097 3 570 182685 intronic -2.41 0 0,1,0 0 0,0,0 191.60350877193 12.2282234447273 72.747 165.705263157895 15.6691353969948 133.138 106.647368421053 15.7231463995402 107.638 0 0 cat,chimp,cow,elephant,guinea_pig,horse,human,macaque,marmoset,mouse,orangutan,panda,pig,rabbit,rat, lincRNA lincRNA A549@0.001606,AG04450@0.034939,BJ@0.332242,GM12878@0.0012645,H1HESC@0,HELAS3@0.0037915,HEPG2@0,HMEC@0,HSMM@0.119886,HUVEC@0.112046,K562@0.007921,MCF7@0.139412,NHEK@0.000608,NHLF@0.388892,SKNSHRA@1.43063, 0 0 0 0 ENSG00000223930.1 ENST00000439810.1 chr3:177924467-178103205 4 575 178157 intronic -0.10 0 0,1,1 0 0,0,0 188.535652173913 11.7166375724782 57.54 279.725217391304 15.7882317281948 65.314 194.688695652174 15.8142649460869 54.427 0 0 cat,chimp,cow,elephant,guinea_pig,horse,human,macaque,marmoset,mouse,orangutan,pig,rabbit,rat, lincRNA lincRNA A549@0.001606,AG04450@0.034939,BJ@0.332242,GM12878@0.0012645,H1HESC@0,HELAS3@0.0037915,HEPG2@0,HMEC@0,HSMM@0.119886,HUVEC@0.112046,K562@0.007921,MCF7@0.139412,NHEK@0.000608,NHLF@0.388892,SKNSHRA@1.43063, 0 0 0 0 ENSG00000223930.1 ENST00000411727.1 chr3:178051327-178103184 2 2098 49757 intronic 4.09 0 0,1,0 0 0,0,0 2.93851286939943 2.80350503446751 66.171 31.4966634890372 9.92776895713166 78.502 24.0119161105815 11.9253773338425 66.796 0 0 human, lincRNA lincRNA A549@0.001606,AG04450@0.034939,BJ@0.332242,GM12878@0.0012645,H1HESC@0,HELAS3@0.0037915,HEPG2@0,HMEC@0,HSMM@0.119886,HUVEC@0.112046,K562@0.007921,MCF7@0.139412,NHEK@0.000608,NHLF@0.388892,SKNSHRA@1.43063, 0 0 0 0 ENSG00000223930.1 ENST00000418585.1 chr3:178052810-178103164 3 637 49713 intronic -0.10 0 0,1,1 0 0,0,0 0 2.80598636171625 72.747 84.0188383045526 9.93655583046688 91.062 60.5918367346939 11.9359322511214 78.576 0 0 human, lincRNA lincRNA A549@0.001606,AG04450@0.034939,BJ@0.332242,GM12878@0.0012645,H1HESC@0,HELAS3@0.0037915,HEPG2@0,HMEC@0,HSMM@0.119886,HUVEC@0.112046,K562@0.007921,MCF7@0.139412,NHEK@0.000608,NHLF@0.388892,SKNSHRA@1.43063, 0 0 0 0 ENSG00000223930.1 ENST00000417383.1 chr3:178052813-178103145 2 547 49783 intronic -2.09 0 0,1,1 0 0,0,0 0 2.80204085732077 72.747 76.0292504570384 9.92258401462347 102.994 50.1023765996344 11.9191491071249 89.767 0 0 human, lincRNA lincRNA A549@0.001606,AG04450@0.034939,BJ@0.332242,GM12878@0.0012645,H1HESC@0,HELAS3@0.0037915,HEPG2@0,HMEC@0,HSMM@0.119886,HUVEC@0.112046,K562@0.007921,MCF7@0.139412,NHEK@0.000608,NHLF@0.388892,SKNSHRA@1.43063, 0 0 0 0 ENSG00000223941.1 ENST00000455307.1 chr3:178136989-178175093 3 545 37555 intronic 3.23 1 0,0,0 0 0,0,0 31.8532110091743 7.10688323791772 3.968 0 12.6518972174145 1.984 12.4825688073394 11.7119424843563 2.224 0 0 cat,chimp,cow,elephant,horse,human,marmoset,orangutan,pig,rabbit, sense_intronic sense_intronic A549@0.0096785,AG04450@0.004321,BJ@0,GM12878@0.023819,H1HESC@0,HELAS3@0,HEPG2@0.015881,HMEC@0,HSMM@0,HUVEC@0,K562@0.0452155,MCF7@0,NHEK@0,NHLF@0.010009,SKNSHRA@0, 0 0 0 0 ENSG00000223941.1 ENST00000436432.1 chr3:178137022-178175097 3 542 37529 intronic 0.67 1 0,1,0 0 0,0,0 16.929889298893 7.11180686935437 12.152 0 12.660662421061 1.984 8.25092250922509 11.720056489648 4.555 0 0 cat,chimp,cow,elephant,horse,human,macaque,marmoset,orangutan,panda,pig,rabbit, sense_intronic sense_intronic A549@0.0096785,AG04450@0.004321,BJ@0,GM12878@0.023819,H1HESC@0,HELAS3@0,HEPG2@0.015881,HMEC@0,HSMM@0,HUVEC@0,K562@0.0452155,MCF7@0,NHEK@0,NHLF@0.010009,SKNSHRA@0, 0 0 0 0 ENSG00000223941.1 ENST00000441018.1 chr3:178137046-178175091 2 326 37717 intronic 2.70 1 0,1,0 0 0,0,0 9.88957055214724 7.07635814089137 18.104 0 12.5975554789617 1.984 3.07975460122699 11.6616379881751 8.023 0 0 cat,chimp,cow,elephant,guinea_pig,horse,human,macaque,marmoset,orangutan,panda,pig,rabbit, sense_intronic sense_intronic A549@0.0096785,AG04450@0.004321,BJ@0,GM12878@0.023819,H1HESC@0,HELAS3@0,HEPG2@0.015881,HMEC@0,HSMM@0,HUVEC@0,K562@0.0452155,MCF7@0,NHEK@0,NHLF@0.010009,SKNSHRA@0, 0 0 0 0 ENSG00000237978.1 ENST00000437488.1 chr3:178244293-178578140 8 956 332877 intronic 2.38 0 0,1,0 0 0,0,0 13.0282426778243 8.4728353115415 0 17.7771966527197 12.2908491725172 0 20.5617154811716 14.9602676063531 0 0 0 cat,chimp,cow,elephant,horse,human,macaque,marmoset,orangutan,panda,pig,rabbit, lincRNA processed_transcript A549@0,AG04450@0,BJ@0,GM12878@0.1225,H1HESC@0.457155,HELAS3@0,HEPG2@0.0088405,HMEC@0.010419,HSMM@0.044887,HUVEC@0.007052,K562@0.388565,MCF7@0.61548,NHEK@0.00335933,NHLF@0,SKNSHRA@0.0218145, 0 0 0 0 ENSG00000237978.1 ENST00000432385.1 chr3:178447072-178577338 5 511 129747 intronic -3.03 0 0,0,0 0 0,0,0 0 9.41294981772218 0 15.986301369863 13.5745181006112 0 16.3972602739726 19.380440395539 0 0 0 chimp,cow,dog,guinea_pig,horse,human,macaque,orangutan,pig,rabbit, lincRNA processed_transcript A549@0,AG04450@0,BJ@0,GM12878@0.1225,H1HESC@0.457155,HELAS3@0,HEPG2@0.0088405,HMEC@0.010419,HSMM@0.044887,HUVEC@0.007052,K562@0.388565,MCF7@0.61548,NHEK@0.00335933,NHLF@0,SKNSHRA@0.0218145, 0 0 0 0 ENSG00000237978.1 ENST00000451742.1 chr3:178464727-178578137 8 836 112560 intronic -4.64 0 0,1,0 0 0,0,0 0 9.88588308457711 0 0 14.0919331911869 0 0 20.7211620469083 0 0 0 chimp,human,macaque,orangutan, lincRNA processed_transcript A549@0,AG04450@0,BJ@0,GM12878@0.1225,H1HESC@0.457155,HELAS3@0,HEPG2@0.0088405,HMEC@0.010419,HSMM@0.044887,HUVEC@0.007052,K562@0.388565,MCF7@0.61548,NHEK@0.00335933,NHLF@0,SKNSHRA@0.0218145, 0 0 0 0 ENSG00000237978.1 ENST00000425330.1 chr3:178466077-178578193 4 504 111606 intronic -0.83 0 0,1,0 0 0,0,0 0 9.97038689676182 0 0 14.1995412433023 0 0 20.8820403920936 0 0 0 chimp,cow,human,macaque,orangutan, lincRNA retained_intron A549@0,AG04450@0,BJ@0,GM12878@0.1225,H1HESC@0.457155,HELAS3@0,HEPG2@0.0088405,HMEC@0.010419,HSMM@0.044887,HUVEC@0.007052,K562@0.388565,MCF7@0.61548,NHEK@0.00335933,NHLF@0,SKNSHRA@0.0218145, 0 0 0 0 ENSG00000237978.1 ENST00000421498.1 chr3:178466776-178519724 2 391 52555 intronic 0 0 0,0,1 0 0,0,0 0 3.72250023784607 43.136 0 6.00759204642755 64.644 0 17.8226048901151 77.389 0 0 NA lincRNA retained_intron A549@0,AG04450@0,BJ@0,GM12878@0.1225,H1HESC@0.457155,HELAS3@0,HEPG2@0.0088405,HMEC@0.010419,HSMM@0.044887,HUVEC@0.007052,K562@0.388565,MCF7@0.61548,NHEK@0.00335933,NHLF@0,SKNSHRA@0.0218145, 0 0 0 0 ENSG00000229102.1 ENST00000435560.1 chr3:178819154-178865761 3 348 46255 intergenic 0 1 1,1,1 0 0,0,0 0 0.347205707491082 171.08 0 2.83229921089612 315.355 0 12.5468381796563 308.149 0 0 chimp,human,macaque,orangutan, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0.037806,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0.023301,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000242539.1 ENST00000495081.1 chr3:179115405-179116506 2 566 533 intergenic -5.18 0 0,0,0 0 0,0,0 0 0 0 0 0 10.693 0 0 46.824 0 0 chimp,human,macaque,marmoset,orangutan, antisense antisense A549@0.171665,AG04450@0.241895,BJ@0.316387,GM12878@2.00583,H1HESC@0.255824,HELAS3@0.823297,HEPG2@1.09172,HMEC@0.047216,HSMM@0.169913,HUVEC@0.173644,K562@0.560512,MCF7@0.29077,NHEK@0.344988,NHLF@0.04104,SKNSHRA@0.586566, 0 0 0 0 ENSG00000243799.1 ENST00000466064.1 chr3:179593164-179599397 2 825 5406 exonic -2.08 1 0,0,0 0 0,0,0 38.8278787878788 12.6163522012579 20.276 71.5381818181818 29.6330003699593 38.421 65.6678787878788 35.21735109138 37.55 0 0 cat,chimp,cow,dog,elephant,horse,human,macaque,marmoset,orangutan,panda,pig,rabbit, antisense antisense A549@0,AG04450@0,BJ@0,GM12878@0.0077095,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0.0049725,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000244302.1 ENST00000462801.1 chr3:179616017-179639683 3 627 23035 exonic 1.12 1 0,0,0 0 0,0,0 173.869218500797 24.6565226828739 465.933 192.598086124402 26.9013674842631 1072.164 175.88038277512 23.837334490992 454.238 0 0 chimp,cow,guinea_pig,horse,human,macaque,marmoset,opossum,orangutan,pig, antisense antisense A549@0,AG04450@0,BJ@0,GM12878@0.0684745,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0.00202633,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000241696.1 ENST00000488262.1 chr3:180131962-180140294 2 938 7392 intergenic -13.18 1 0,0,0 0 0,0,0 0 0 0 10.0298507462687 3.17694805194805 0 35.8848614072495 3.91585497835498 0 0 0 chimp,cow,horse,human,macaque,marmoset,orangutan,pig,rabbit, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0.0081435,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000241696.1 ENST00000464537.1 chr3:180132000-180140168 2 477 7689 intergenic 0 1 0,1,0 0 0,0,0 0 0 0 14.6918238993711 3.05423332032774 0 64.7631027253669 3.76459877747431 0 0 0 chimp,cow,dog,elephant,horse,human,macaque,marmoset,orangutan,pig,rabbit, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0.0081435,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000239774.1 ENST00000472596.1 chr3:180284506-180319723 3 560 34653 intergenic 0 0 0,0,1 0 0,0,0 0 13.3498398407064 13.621 0 14.4922806106253 64.507 0 14.8054425302283 78.076 0 0 chimp,guinea_pig,human,macaque,marmoset,orangutan, processed_transcript processed_transcript A549@0,AG04450@0.004183,BJ@0,GM12878@0.019164,H1HESC@0.0052785,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0.0562145,NHEK@0,NHLF@0.003427,SKNSHRA@0.0224065, 0 0 0 0 ENSG00000243187.1 ENST00000495357.1 chr3:180397872-180418237 2 281 20082 intronic 1.83 0 0,0,1 0 0,0,0 359.341637010676 17.7778109750025 24.005 423.572953736655 25.0262424061349 50.986 409.4128113879 25.3077382730804 47.819 0 0 chimp,cow,dog,horse,human,macaque,marmoset,mouse,orangutan,panda,rabbit, antisense antisense A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0.0315035,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0.0213125,NHEK@0,NHLF@0,SKNSHRA@0.0357, 0 0 0 0 ENSG00000243341.1 ENST00000487240.1 chr3:180707558-180775032 3 748 66722 exonic -4.91 0 0,1,0 1 0,0,0 571.863636363636 12.3053715416205 0 578.774064171123 15.4024010071641 10.293 481.891711229947 22.1711879140314 9.478 0 0 chimp,cow,dog,elephant,guinea_pig,horse,human,macaque,marmoset,mouse,opossum,orangutan,panda,pig,platypus,rabbit,rat, lincRNA processed_transcript A549@0.0043785,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0.0037325,HMEC@0,HSMM@0,HUVEC@0,K562@0.001999,MCF7@0,NHEK@0.00795,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000242808.1 ENST00000461063.1 chr3:180721562-180893607 3 504 171537 intergenic -2.49 0 0,0,0 0 0,0,0 28.9265873015873 24.6546226178609 0 30.4404761904762 26.2512460868501 0 22.2321428571429 35.8382622990958 0 0 0 chimp,dog,horse,human,macaque,marmoset,mouse,orangutan,rabbit,rat, lincRNA processed_transcript A549@0.222981,AG04450@0.0111775,BJ@0.0530735,GM12878@0.0571895,H1HESC@1.20672,HELAS3@0.0783795,HEPG2@0.0174035,HMEC@0.023308,HSMM@0.011303,HUVEC@0.262503,K562@0.060762,MCF7@0.146175,NHEK@0.06618,NHLF@0.0276615,SKNSHRA@0.218375, 0 0 0 0 ENSG00000242808.1 ENST00000493521.1 chr3:180774468-181457813 7 1232 682101 encompassing -2.06 1 0,0,0 0 0,0,0 363.680194805195 47.9274066450569 615.434 322.803571428571 51.8953923245971 543.148 294.131493506493 55.7763351761691 592.084 0 0 cat,chimp,cow,dog,elephant,guinea_pig,horse,human,macaque,marmoset,opossum,orangutan,panda,pig,rabbit,rat, lincRNA processed_transcript A549@0.222981,AG04450@0.0111775,BJ@0.0530735,GM12878@0.0571895,H1HESC@1.20672,HELAS3@0.0783795,HEPG2@0.0174035,HMEC@0.023308,HSMM@0.011303,HUVEC@0.262503,K562@0.060762,MCF7@0.146175,NHEK@0.06618,NHLF@0.0276615,SKNSHRA@0.218375, 0 0 0 0 ENSG00000242808.1 ENST00000460739.1 chr3:180774473-181417572 5 604 642487 intergenic -2.23 0 0,0,1 0 0,0,0 406.475165562914 38.9079530013837 619.344 415.587748344371 43.1445149862955 547.403 366.011589403974 47.4511095166126 596.559 0 0 cat,chimp,cow,dog,elephant,guinea_pig,horse,human,macaque,marmoset,mouse,opossum,orangutan,panda,pig,rabbit,rat, lincRNA processed_transcript A549@0.222981,AG04450@0.0111775,BJ@0.0530735,GM12878@0.0571895,H1HESC@1.20672,HELAS3@0.0783795,HEPG2@0.0174035,HMEC@0.023308,HSMM@0.011303,HUVEC@0.262503,K562@0.060762,MCF7@0.146175,NHEK@0.06618,NHLF@0.0276615,SKNSHRA@0.218375, 0 0 0 0 ENSG00000242808.1 ENST00000493116.1 chr3:180892813-181281643 3 557 388269 intergenic 1.71 0 0,0,0 0 0,0,0 526.224416517056 38.3623673278062 637.531 441.874326750449 42.5719514048251 661.602 448.201077199282 45.8265249092769 675.298 0 0 chimp,cow,dog,elephant,guinea_pig,horse,human,macaque,marmoset,mouse,opossum,orangutan,panda,pig,platypus,rabbit,rat, lincRNA processed_transcript A549@0.222981,AG04450@0.0111775,BJ@0.0530735,GM12878@0.0571895,H1HESC@1.20672,HELAS3@0.0783795,HEPG2@0.0174035,HMEC@0.023308,HSMM@0.011303,HUVEC@0.262503,K562@0.060762,MCF7@0.146175,NHEK@0.06618,NHLF@0.0276615,SKNSHRA@0.218375, 0 0 0 0 ENSG00000242808.1 ENST00000469278.1 chr3:180892932-181457445 5 556 563949 encompassing -2.23 0 0,1,0 0 0,0,0 349.508992805755 52.5488457289578 716.998 279.294964028777 57.0320046670886 758.687 273.311151079137 59.5558853726135 776.609 0 0 cat,chimp,cow,dog,elephant,guinea_pig,horse,human,macaque,marmoset,orangutan,panda,pig,rabbit,rat, lincRNA processed_transcript A549@0.222981,AG04450@0.0111775,BJ@0.0530735,GM12878@0.0571895,H1HESC@1.20672,HELAS3@0.0783795,HEPG2@0.0174035,HMEC@0.023308,HSMM@0.011303,HUVEC@0.262503,K562@0.060762,MCF7@0.146175,NHEK@0.06618,NHLF@0.0276615,SKNSHRA@0.218375, 0 0 0 0 ENSG00000241231.1 ENST00000460993.1 chr3:181138846-181160274 5 860 20560 intergenic 3.35 0 0,0,0 0 0,0,0 0 28.9940661478599 231.393 0 46.080593385214 306.578 0 51.0785505836576 315.458 0 0 cat,chimp,dog,elephant,horse,human,macaque,marmoset,orangutan, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000239381.1 ENST00000481234.1 chr3:181251965-181253662 3 769 924 intergenic -0.51 0 0,0,0 0 0,0,0 189.386215864759 422.274891774892 6.9 332.810143042913 472.099567099567 0 373.395318595579 482.172077922078 1.215 0 0 cat,chimp,cow,dog,elephant,guinea_pig,horse,human,macaque,marmoset,mouse,orangutan,panda,platypus,rabbit, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000239381.1 ENST00000470817.1 chr3:181252400-181253662 2 521 739 intergenic -1.88 0 0,0,0 0 0,0,0 275.516314779271 530.820027063599 6.9 473.857965451056 581.604871447903 0 528.165067178503 597.769959404601 1.215 0 0 cat,chimp,cow,dog,elephant,guinea_pig,horse,human,macaque,marmoset,mouse,opossum,orangutan,panda,platypus,rabbit,rat, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000239381.1 ENST00000482559.1 chr3:181252403-181253669 2 528 736 intergenic -0.51 0 0,0,0 0 0,0,0 278.878787878788 530.138586956522 5.29 472.30303030303 580.584239130435 0 526.100378787879 596.664402173913 1.215 0 0 cat,chimp,cow,dog,elephant,guinea_pig,horse,human,macaque,marmoset,mouse,opossum,orangutan,panda,platypus,rabbit,rat, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000242808.1 ENST00000497122.1 chr3:181281244-181348678 3 575 66855 intergenic -8.65 0 0,0,0 0 0,0,0 87.9930434782609 54.924478348665 0 90.464347826087 64.0705706379478 0 81.9391304347826 65.4171864482836 0 0 0 cat,chimp,cow,dog,elephant,guinea_pig,horse,human,macaque,marmoset,mouse,orangutan,panda,rabbit,rat, lincRNA processed_transcript A549@0.222981,AG04450@0.0111775,BJ@0.0530735,GM12878@0.0571895,H1HESC@1.20672,HELAS3@0.0783795,HEPG2@0.0174035,HMEC@0.023308,HSMM@0.011303,HUVEC@0.262503,K562@0.060762,MCF7@0.146175,NHEK@0.06618,NHLF@0.0276615,SKNSHRA@0.218375, 0 0 0 0 ENSG00000242808.1 ENST00000472856.1 chr3:181281498-181389529 2 452 107577 intergenic -4.82 1 0,0,0 0 0,0,0 21.3716814159292 43.4510257768854 0 0 52.3573719289439 0 0 54.996049341402 0 0 0 chimp,cow,dog,elephant,guinea_pig,horse,human,macaque,marmoset,orangutan,panda,rabbit, lincRNA processed_transcript A549@0.222981,AG04450@0.0111775,BJ@0.0530735,GM12878@0.0571895,H1HESC@1.20672,HELAS3@0.0783795,HEPG2@0.0174035,HMEC@0.023308,HSMM@0.011303,HUVEC@0.262503,K562@0.060762,MCF7@0.146175,NHEK@0.06618,NHLF@0.0276615,SKNSHRA@0.218375, 0 0 0 0 ENSG00000242808.1 ENST00000498731.1 chr3:181281509-181460261 5 3571 175173 encompassing -0.32 1 0,0,1 0 0,0,0 197.752730327639 81.9769028331992 0 202.970316437973 87.2070239135029 0 197.231027723327 88.4277656944849 0 0 0 cat,chimp,cow,dog,guinea_pig,horse,human,macaque,marmoset,mouse,opossum,orangutan,panda,pig,rabbit,rat, lincRNA processed_transcript A549@0.222981,AG04450@0.0111775,BJ@0.0530735,GM12878@0.0571895,H1HESC@1.20672,HELAS3@0.0783795,HEPG2@0.0174035,HMEC@0.023308,HSMM@0.011303,HUVEC@0.262503,K562@0.060762,MCF7@0.146175,NHEK@0.06618,NHLF@0.0276615,SKNSHRA@0.218375, 0 0 0 0 ENSG00000242808.1 ENST00000476964.1 chr3:181328122-181457481 3 603 128752 encompassing 0 0 0,1,0 0 0,0,0 288.553897180763 101.924645830744 329.201 400.621890547264 105.965103454704 373.855 448.258706467662 107.216796632285 359.38 0 0 cat,chimp,cow,dog,elephant,guinea_pig,horse,human,macaque,marmoset,mouse,opossum,orangutan,panda,pig,rabbit,rat, lincRNA processed_transcript A549@0.222981,AG04450@0.0111775,BJ@0.0530735,GM12878@0.0571895,H1HESC@1.20672,HELAS3@0.0783795,HEPG2@0.0174035,HMEC@0.023308,HSMM@0.011303,HUVEC@0.262503,K562@0.060762,MCF7@0.146175,NHEK@0.06618,NHLF@0.0276615,SKNSHRA@0.218375, 0 0 0 0 ENSG00000242808.1 ENST00000492337.1 chr3:181328151-181459018 5 2503 128356 encompassing -3.83 0 0,1,0 0 0,0,0 197.597283260088 99.9511281124372 328.476 233.024370755094 103.822797531864 371.796 223.797043547743 105.476541805603 357.727 0 0 cat,chimp,cow,dog,elephant,guinea_pig,horse,human,macaque,marmoset,orangutan,panda,pig, lincRNA processed_transcript A549@0.222981,AG04450@0.0111775,BJ@0.0530735,GM12878@0.0571895,H1HESC@1.20672,HELAS3@0.0783795,HEPG2@0.0174035,HMEC@0.023308,HSMM@0.011303,HUVEC@0.262503,K562@0.060762,MCF7@0.146175,NHEK@0.06618,NHLF@0.0276615,SKNSHRA@0.218375, 0 0 0 0 ENSG00000242808.1 ENST00000491282.1 chr3:181328312-181457661 4 878 128465 encompassing -2.06 0 0,1,0 0 0,0,0 420.137813211845 100.443288055112 273.444 461.837129840547 104.300642198264 307.777 443.263097949886 105.951286342584 294.208 0 0 cat,chimp,cow,dog,elephant,horse,human,macaque,marmoset,mouse,opossum,orangutan,panda,rabbit,rat, lincRNA processed_transcript A549@0.222981,AG04450@0.0111775,BJ@0.0530735,GM12878@0.0571895,H1HESC@1.20672,HELAS3@0.0783795,HEPG2@0.0174035,HMEC@0.023308,HSMM@0.011303,HUVEC@0.262503,K562@0.060762,MCF7@0.146175,NHEK@0.06618,NHLF@0.0276615,SKNSHRA@0.218375, 0 0 0 0 ENSG00000242808.1 ENST00000498226.1 chr3:181328317-181508734 3 557 179856 encompassing 0.00 0 0,1,0 0 0,0,0 120.797127468582 86.7087503336002 272.064 265.368043087971 88.950732808469 306.702 293.788150807899 90.4741459834535 293.283 0 0 cat,chimp,cow,dog,elephant,horse,human,macaque,marmoset,mouse,opossum,orangutan,panda,pig,rabbit,rat, lincRNA processed_transcript A549@0.222981,AG04450@0.0111775,BJ@0.0530735,GM12878@0.0571895,H1HESC@1.20672,HELAS3@0.0783795,HEPG2@0.0174035,HMEC@0.023308,HSMM@0.011303,HUVEC@0.262503,K562@0.060762,MCF7@0.146175,NHEK@0.06618,NHLF@0.0276615,SKNSHRA@0.218375, 0 0 0 0 ENSG00000242808.1 ENST00000485035.1 chr3:181328329-181417668 3 558 88777 intergenic -6.77 0 0,1,1 0 0,0,0 504.584229390681 58.1842256440294 268.752 687.73476702509 63.8791240974577 304.122 624.403225806452 67.6831048582403 291.063 0 0 cat,chimp,cow,dog,elephant,guinea_pig,horse,human,macaque,mouse,opossum,orangutan,panda,rabbit,rat, lincRNA processed_transcript A549@0.222981,AG04450@0.0111775,BJ@0.0530735,GM12878@0.0571895,H1HESC@1.20672,HELAS3@0.0783795,HEPG2@0.0174035,HMEC@0.023308,HSMM@0.011303,HUVEC@0.262503,K562@0.060762,MCF7@0.146175,NHEK@0.06618,NHLF@0.0276615,SKNSHRA@0.218375, 0 0 0 0 ENSG00000242808.1 ENST00000476125.1 chr3:181328397-181428083 4 975 98705 intergenic -4.02 0 0,0,1 0 0,0,0 380.785641025641 71.9356162301808 245.476 386.654358974359 77.7552302314979 293.423 342.070769230769 80.8604427333974 283.576 0 0 cat,chimp,cow,dog,elephant,guinea_pig,horse,human,macaque,marmoset,mouse,orangutan,panda,rat, lincRNA processed_transcript A549@0.222981,AG04450@0.0111775,BJ@0.0530735,GM12878@0.0571895,H1HESC@1.20672,HELAS3@0.0783795,HEPG2@0.0174035,HMEC@0.023308,HSMM@0.011303,HUVEC@0.262503,K562@0.060762,MCF7@0.146175,NHEK@0.06618,NHLF@0.0276615,SKNSHRA@0.218375, 0 0 0 0 ENSG00000242808.1 ENST00000477928.1 chr3:181417281-181457867 2 900 39684 encompassing -2.06 1 0,0,1 0 0,0,0 422.568888888889 194.930400161274 582.832 382.481111111111 194.670118939623 479.302 326.961111111111 191.511767966939 462.848 0 0 chimp,cow,dog,elephant,horse,human,macaque,marmoset,orangutan,panda,pig,rabbit,rat, lincRNA retained_intron A549@0.222981,AG04450@0.0111775,BJ@0.0530735,GM12878@0.0571895,H1HESC@1.20672,HELAS3@0.0783795,HEPG2@0.0174035,HMEC@0.023308,HSMM@0.011303,HUVEC@0.262503,K562@0.060762,MCF7@0.146175,NHEK@0.06618,NHLF@0.0276615,SKNSHRA@0.218375, 0 0 0 0 ENSG00000242808.1 ENST00000466034.1 chr3:181417284-181457786 3 923 39575 encompassing -3.83 1 0,0,0 0 0,0,0 488.382448537378 193.594390397979 585.127 447.507042253521 193.369197725837 481.855 393.187432286024 190.207656348705 465.356 0 0 cat,chimp,cow,dog,elephant,horse,human,macaque,marmoset,orangutan,panda,rabbit,rat, lincRNA retained_intron A549@0.222981,AG04450@0.0111775,BJ@0.0530735,GM12878@0.0571895,H1HESC@1.20672,HELAS3@0.0783795,HEPG2@0.0174035,HMEC@0.023308,HSMM@0.011303,HUVEC@0.262503,K562@0.060762,MCF7@0.146175,NHEK@0.06618,NHLF@0.0276615,SKNSHRA@0.218375, 0 0 0 0 ENSG00000242808.1 ENST00000490005.1 chr3:181417382-181417888 2 385 119 intergenic -2.97 1 0,0,0 0 0,0,0 665.01038961039 554.050420168067 660.097 714.002597402597 583.554621848739 565.253 612.550649350649 479.310924369748 532.104 0 0 cat,chimp,cow,dog,elephant,guinea_pig,horse,human,macaque,marmoset,mouse,opossum,orangutan,panda,platypus,rabbit,rat, lincRNA processed_transcript A549@0.222981,AG04450@0.0111775,BJ@0.0530735,GM12878@0.0571895,H1HESC@1.20672,HELAS3@0.0783795,HEPG2@0.0174035,HMEC@0.023308,HSMM@0.011303,HUVEC@0.262503,K562@0.060762,MCF7@0.146175,NHEK@0.06618,NHLF@0.0276615,SKNSHRA@0.218375, 0 0 0 0 ENSG00000242512.1 ENST00000490001.1 chr3:181670161-181718050 7 942 46935 intergenic 4.40 0 0,0,0 0 0,0,0 0 22.7990199211676 14.25 3.72611464968153 24.994289975498 49.616 5.6072186836518 26.3412165761159 63.507 0 0 chimp,horse,human,marmoset,orangutan, lincRNA lincRNA A549@0.0019155,AG04450@0,BJ@0,GM12878@0.052087,H1HESC@0.0115995,HELAS3@0,HEPG2@0.005659,HMEC@0,HSMM@0.0009185,HUVEC@0.000833,K562@0,MCF7@0.003475,NHEK@0.000589333,NHLF@0,SKNSHRA@0.0133315, 0 0 0 0 ENSG00000242512.1 ENST00000467313.1 chr3:181670162-181691133 5 698 20265 intergenic 4.40 0 0,0,0 0 0,0,0 0 14.4213668887244 13.875 4.64183381088825 19.3805576116457 49.306 7.16905444126075 18.6727855909203 63.18 0 0 chimp,horse,human,marmoset,orangutan,panda, lincRNA lincRNA A549@0.0019155,AG04450@0,BJ@0,GM12878@0.052087,H1HESC@0.0115995,HELAS3@0,HEPG2@0.005659,HMEC@0,HSMM@0.0009185,HUVEC@0.000833,K562@0,MCF7@0.003475,NHEK@0.000589333,NHLF@0,SKNSHRA@0.0133315, 0 0 0 0 ENSG00000242512.1 ENST00000482787.1 chr3:181670167-181721841 8 2911 48749 intergenic 4.40 0 0,0,0 0 0,0,0 2.44108553761594 22.3271041457261 12 3.58639642734456 24.1839012082299 47.756 5.03641360357266 25.4857125274365 61.545 0 0 chimp,human,macaque,marmoset,orangutan, lincRNA lincRNA A549@0.0019155,AG04450@0,BJ@0,GM12878@0.052087,H1HESC@0.0115995,HELAS3@0,HEPG2@0.005659,HMEC@0,HSMM@0.0009185,HUVEC@0.000833,K562@0,MCF7@0.003475,NHEK@0.000589333,NHLF@0,SKNSHRA@0.0133315, 0 0 0 0 ENSG00000242512.1 ENST00000474045.1 chr3:181670174-181720910 3 2237 48495 intergenic 2.07 0 0,0,0 0 0,0,0 0 22.5905763480771 9.375 10.3737147966026 24.3105680998041 45.586 0.982565936522128 25.619197855449 59.256 0 0 chimp,horse,human,macaque,marmoset,orangutan, lincRNA lincRNA A549@0.0019155,AG04450@0,BJ@0,GM12878@0.052087,H1HESC@0.0115995,HELAS3@0,HEPG2@0.005659,HMEC@0,HSMM@0.0009185,HUVEC@0.000833,K562@0,MCF7@0.003475,NHEK@0.000589333,NHLF@0,SKNSHRA@0.0133315, 0 0 0 0 ENSG00000242512.1 ENST00000476815.1 chr3:181670192-181689667 4 478 18991 intergenic 4.40 0 0,0,0 0 0,0,0 0 15.3888157548312 2.625 0 20.5464167237112 35.416 0 19.7250803011953 50.312 0 0 chimp,horse,human,marmoset,orangutan, lincRNA lincRNA A549@0.0019155,AG04450@0,BJ@0,GM12878@0.052087,H1HESC@0.0115995,HELAS3@0,HEPG2@0.005659,HMEC@0,HSMM@0.0009185,HUVEC@0.000833,K562@0,MCF7@0.003475,NHEK@0.000589333,NHLF@0,SKNSHRA@0.0133315, 0 0 0 0 ENSG00000240478.1 ENST00000462382.1 chr3:181839672-181859925 2 475 19776 intergenic -2.56 0 0,1,0 0 0,0,0 312.204210526316 48.4774474110032 491.491 187.858947368421 38.9844761326861 443.213 193.46947368421 37.8702973300971 369.539 0 0 cat,chimp,dog,elephant,guinea_pig,human,macaque,marmoset,orangutan,pig,rabbit, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000242012.1 ENST00000473893.1 chr3:182082935-182086044 2 326 2781 intergenic -14.14 1 0,0,0 0 0,0,0 362.736196319018 116.640057533261 100.64 388.751533742331 108.710176195613 106.803 355.306748466258 87.8644372527868 72.761 0 0 chimp,guinea_pig,horse,human,macaque,marmoset,orangutan,rat, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0.0081625,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000241098.1 ENST00000496220.1 chr3:182164758-182204152 4 1804 37584 intergenic 0.82 0 0,1,0 0 0,0,0 33.5692904656319 31.5234674329502 215.308 7.6480044345898 44.721929544487 431.072 12.0709534368071 52.3478607918263 414.424 0 0 chimp,cow,dog,horse,human,macaque,marmoset,orangutan,pig,rabbit, processed_transcript processed_transcript A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0.0204033,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000244247.1 ENST00000489016.1 chr3:182216052-182224912 4 617 8237 intergenic -9.44 0 0,0,1 0 0,0,0 0 104.373436930921 0 7.63695299837925 93.4961757921573 0 8.37601296596434 102.121403423577 0 0 0 chimp,dog,human,macaque,marmoset,orangutan,panda, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0.00850367,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000238837.3 ENST00000492416.2 chr3:182362002-182373668 5 587 11071 intergenic 1.02 0 0,0,0 0 0,0,0 0 23.0559067919075 60.685 9.68088737201365 27.5509393063584 38.663 4.67576791808874 29.0732478323699 51.441 0 0 chimp,cow,horse,human,macaque,orangutan, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0.062249,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0.0150943,NHLF@0,SKNSHRA@0.003839, 0 0 0 0 ENSG00000240063.1 ENST00000488882.1 chr3:182501024-182511182 2 1875 8281 intergenic 1.28 0 0,1,0 0 0,0,0 0 0.605723946383287 53.912 5.06986666666667 2.50573602221954 66.636 5.8384 3.70136456949644 68.074 0 0 cat,chimp,cow,horse,human,macaque,orangutan,panda, antisense antisense A549@0.0037845,AG04450@0.003436,BJ@0.0013115,GM12878@0.114373,H1HESC@0.11343,HELAS3@0.0359635,HEPG2@0.0144295,HMEC@0.008726,HSMM@0.006651,HUVEC@0.0145525,K562@0.05403,MCF7@0.0380195,NHEK@0.00994133,NHLF@0.058317,SKNSHRA@0.0143535, 0 0 0 0 ENSG00000243368.1 ENST00000471731.1 chr3:182734043-182735420 2 587 788 exonic -3.48 0 0,0,0 0 0,0,0 65.8568994889267 0 44.52 57.8926746166951 0 23.999 59.8466780238501 0 35.693 0 0 cat,chimp,cow,human,macaque,marmoset,orangutan, antisense antisense A549@0,AG04450@0.010949,BJ@0,GM12878@0.0034225,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000242522.1 ENST00000491676.1 chr3:183266523-183270114 2 501 3088 intronic 0.82 1 0,0,0 0 0,0,0 0 0 0 0 0 0 0 0 0 0 0 chimp,human,marmoset,orangutan, antisense antisense A549@0.050997,AG04450@0,BJ@0,GM12878@0.0253505,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0.111173,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000233885.1 ENST00000425008.1 chr3:183525552-183526729 2 559 616 exonic 0.90 0 0,0,0 0 0,0,0 39.5384615384615 0 24.88 44.4186046511628 0 25.583 66.479427549195 0 33.933 0 0 chimp,elephant,human,macaque,marmoset,orangutan,panda, antisense antisense A549@0.003869,AG04450@0.0207875,BJ@0.0535445,GM12878@0.0176125,H1HESC@0.0142925,HELAS3@0.0291235,HEPG2@0.0097245,HMEC@0.007299,HSMM@0.014671,HUVEC@0.00476,K562@0.028807,MCF7@0.222856,NHEK@0.0211457,NHLF@0.010434,SKNSHRA@0.147541, 0 0 0 0 ENSG00000223882.1 ENST00000422946.1 chr3:183724126-183729207 3 466 4611 intronic 0.95 0 0,0,1 0 0,0,0 9.86695278969957 3.87247885491217 35.84 12.362660944206 3.80307959227933 28.463 14.9012875536481 3.94556495337237 30.647 0 0 cat,chimp,cow,dog,horse,human,macaque,marmoset,orangutan,panda,pig, antisense antisense A549@0.0236385,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0.0307545,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0.0085735,NHEK@0,NHLF@0,SKNSHRA@0.01147, 0 0 0 0 ENSG00000238020.1 ENST00000431427.1 chr3:183812906-183822966 3 512 9544 exonic 1.39 0 0,0,0 0 0,0,0 61.5234375 11.0936714165968 33.077 49.705078125 11.7078792958927 103.922 80.64453125 21.9445725062867 139.396 0 0 chimp,elephant,guinea_pig,human,macaque,marmoset,opossum,orangutan,pig, antisense antisense A549@0,AG04450@0,BJ@0.0125675,GM12878@0,H1HESC@0.004028,HELAS3@0.004538,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0.0047215,K562@0,MCF7@0.0078965,NHEK@0,NHLF@0,SKNSHRA@0.0052225, 0 0 0 0 ENSG00000227509.1 ENST00000451348.1 chr3:184222901-184226187 2 725 2559 intronic 3.26 0 0,0,1 0 0,0,0 14.9531034482759 15.6334505666276 0 13.088275862069 11.5666275889019 0.956 13.2703448275862 11.6561156701837 7.279 0 0 chimp,cow,elephant,human,macaque,marmoset,orangutan, sense_intronic sense_intronic A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000230215.1 ENST00000421870.1 chr3:184264502-184274706 2 569 9633 intronic 2.35 0 0,0,0 0 0,0,0 17.01230228471 23.3302190387211 0 16.3005272407733 16.329180940517 33.466 16.3866432337434 16.5785321291394 38.642 0 0 chimp,human,macaque,marmoset,orangutan, antisense antisense A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 2 44 0 0 ENSG00000229433.1 ENST00000457449.1 chr3:184474177-184490943 3 2588 14174 intergenic 4.77 1 0,1,1 0 0,0,0 30.6460587326121 38.1410328770989 137.453 420.955177743431 54.0831804712855 127.883 62.8929675425039 52.578241851277 109.709 0 0 human,macaque,marmoset,orangutan, lincRNA lincRNA A549@0.002396,AG04450@0.097698,BJ@0,GM12878@0,H1HESC@0.003441,HELAS3@0,HEPG2@0,HMEC@0.00158,HSMM@0.0029405,HUVEC@0,K562@0.0020665,MCF7@0,NHEK@0.0248137,NHLF@0,SKNSHRA@0.008305, 0 0 0 0 ENSG00000223358.1 ENST00000444571.1 chr3:184880659-184898371 4 566 17140 intergenic 2.19 0 0,0,0 0 0,0,0 44.3745583038869 5.94469078179697 0 6.3339222614841 5.24865810968495 3.107 6.65194346289753 6.67771295215869 3.263 0 0 chimp,human,macaque,marmoset,orangutan, antisense antisense A549@0.0019505,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0.00186467,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000223358.1 ENST00000417720.1 chr3:184880689-184909743 7 1409 27633 exonic 10.89 1 0,0,1 0 0,0,0 17.8254080908446 3.88397930011218 0 8.2249822569198 3.44537328556436 3.107 8.62029808374734 10.9330872507509 3.263 0 0 cat,chimp,dog,human,marmoset,orangutan,panda,rabbit, antisense antisense A549@0.0019505,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0.00186467,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000234197.1 ENST00000453370.1 chr3:185796959-185798736 2 558 1217 intronic -2.41 0 0,0,0 0 0,0,0 170.333333333333 346.222678718159 66.584 187.568100358423 222.917830731307 23.212 163.186379928315 218.599013968776 23.666 0 0 chimp,dog,elephant,horse,human,macaque,marmoset,mouse,opossum,orangutan,panda,rat, antisense antisense A549@0,AG04450@0,BJ@0,GM12878@0.005222,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000234548.1 ENST00000414102.1 chr3:186158134-186162980 3 546 4296 intergenic 2.94 0 0,0,0 0 0,0,0 0 0 0 0 0 0 0 0.452513966480447 0 0 0 chimp,human,macaque,orangutan, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0.006461,SKNSHRA@0, 0 0 0 0 ENSG00000234548.1 ENST00000435548.1 chr3:186158169-186163031 3 601 4257 intergenic 0 0 0,0,0 0 0,0,0 0 0 0 0 0 0 0 0.456659619450317 0 0 0 chimp,elephant,human,macaque,orangutan, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0.006461,SKNSHRA@0, 0 0 0 0 ENSG00000234548.1 ENST00000421006.1 chr3:186158193-186162847 4 571 4077 intergenic -8.21 0 0,0,0 0 0,0,0 0 0 0 0 0 0 0 0.47682119205298 0 0 0 chimp,horse,human,macaque,marmoset,orangutan,panda, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0.006461,SKNSHRA@0, 0 0 0 0 ENSG00000234548.1 ENST00000434896.1 chr3:186158777-186168485 2 421 9285 intergenic 0 0 0,0,1 0 0,0,0 0 0.652773290253096 0 4.23990498812352 4.20193861066236 0 5.03562945368171 5.09294561120086 0 0 0 cat,chimp,cow,dog,elephant,horse,human,macaque,marmoset,orangutan,panda,pig, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0.006461,SKNSHRA@0, 0 0 0 0 ENSG00000224406.1 ENST00000427474.1 chr3:186172771-186173825 3 365 685 intergenic 0 0 0,0,1 0 0,0,0 0 0 0 7.85753424657534 0 5.202 8.20821917808219 0 5.31 0 0 chimp,cow,human,macaque,marmoset,orangutan,panda, lincRNA processed_transcript A549@0,AG04450@0,BJ@0,GM12878@0.040225,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0.0056695,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000224406.1 ENST00000427914.1 chr3:186172780-186211450 8 2277 36379 intergenic 4.46 0 0,0,1 0 0,0,0 3.39042599912165 0.915363259023063 68.708 6.10891523935002 3.02449215206575 90.432 8.59903381642512 3.84229912861816 94.169 0 0 chimp,human,macaque,marmoset,orangutan, lincRNA processed_transcript A549@0,AG04450@0,BJ@0,GM12878@0.040225,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0.0056695,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000224406.1 ENST00000458099.1 chr3:186173328-186175194 5 429 1429 intergenic 3.32 0 0,0,0 0 0,0,0 0 0 0 0 5.02869139258222 0 0 5.70958712386284 0 0 0 chimp,cow,horse,human,macaque,marmoset,orangutan,panda, lincRNA processed_transcript A549@0,AG04450@0,BJ@0,GM12878@0.040225,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0.0056695,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000224406.1 ENST00000441169.1 chr3:186175242-186176271 2 574 453 intergenic -4.38 0 0,0,0 0 0,0,0 0 0 0 0 0 0 0 0 0 0 0 chimp,human,macaque,marmoset,orangutan, lincRNA processed_transcript A549@0,AG04450@0,BJ@0,GM12878@0.040225,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0.0056695,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000226859.1 ENST00000456535.1 chr3:186194516-186196159 2 688 953 intergenic 3.51 0 0,0,0 0 0,0,0 0 0 0 0 0 1.912 0 5.00419727177335 2.259 0 0 chimp,human,macaque,marmoset,orangutan,panda, lincRNA lincRNA A549@0.0102945,AG04450@0.109588,BJ@0.028423,GM12878@5.89948,H1HESC@0.004218,HELAS3@0,HEPG2@0.0063065,HMEC@0.071211,HSMM@0,HUVEC@0.038701,K562@0.00673,MCF7@0.0059595,NHEK@0.00382667,NHLF@0.0112485,SKNSHRA@0.0065765, 0 0 0 0 ENSG00000236524.1 ENST00000428501.1 chr3:186359299-186383496 3 531 23662 intronic -1.01 0 0,0,0 0 0,0,0 0 2.86066266587778 45.741 0 4.98102442735187 65.141 0 5.33040317809145 66.04 0 0 chimp,dog,human,macaque,marmoset,panda, antisense antisense A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000236524.1 ENST00000455926.1 chr3:186359304-186383492 3 406 23778 intronic -1.01 0 0,0,0 0 0,0,0 0 2.84670704012112 45.741 0 4.95672470350744 65.141 0 5.30439902430818 66.04 0 0 cat,chimp,dog,human,macaque,marmoset,orangutan,panda, antisense antisense A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000197099.2 ENST00000354642.2 chr3:186452559-186463919 5 485 10867 exonic -0.87 0 0,0,0 0 0,0,0 110.164948453608 5.77123401122665 0 39.8041237113402 14.5363025674059 0 30.2103092783505 16.9621790742615 0 0 0 chimp,human,macaque,marmoset,orangutan, antisense antisense A549@0.010765,AG04450@0.0091485,BJ@0,GM12878@0,H1HESC@0,HELAS3@0.042593,HEPG2@0.138159,HMEC@0,HSMM@0,HUVEC@0.027249,K562@0.005464,MCF7@0,NHEK@0.00268833,NHLF@0.003982,SKNSHRA@0, 0 0 0 0 ENSG00000231724.1 ENST00000434957.1 chr3:186525481-186535910 2 538 9889 intergenic 0.74 0 0,0,0 0 0,0,0 0 0 0 0 0 8.153 0 1.5990494488826 15.851 0 0 cat,chimp,horse,human,macaque,marmoset,orangutan, antisense antisense A549@0.005115,AG04450@0,BJ@0,GM12878@0.029846,H1HESC@0,HELAS3@0.023972,HEPG2@0.007891,HMEC@0,HSMM@0,HUVEC@0,K562@0.0387945,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000232233.1 ENST00000419745.1 chr3:186528669-186543310 4 1828 12807 intergenic 6.18 0 0,1,0 0 0,0,0 0 0.54969938314984 0 0 0.545326774420239 0 0 1.91543687046147 0 0 0 chimp,human,orangutan, lincRNA processed_transcript A549@0.145787,AG04450@0.0321925,BJ@0.021387,GM12878@0,H1HESC@0.248194,HELAS3@0.330456,HEPG2@0.171879,HMEC@0.042466,HSMM@0.0071025,HUVEC@0.02328,K562@0.227222,MCF7@0.136601,NHEK@0.03012,NHLF@0.0042245,SKNSHRA@0.007719, 0 0 0 0 ENSG00000226482.1 ENST00000422718.1 chr3:186569675-186573912 3 3440 793 exonic 6.27 0 0,0,0 0 0,0,0 62.184011627907 15.2988650693569 0 81.9168604651163 20.4791929382093 0 77.5927325581395 21.8575031525851 5.838 0 0 cat,chimp,human,macaque,marmoset,orangutan,panda, antisense antisense A549@0,AG04450@0.0017195,BJ@0,GM12878@0,H1HESC@0,HELAS3@0.005508,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0.006205,K562@0.0678825,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0.0032305, 0 0 0 0 ENSG00000198491.3 ENST00000356133.3 chr3:186914878-186925417 5 2669 7862 exonic 8.99 0 0,1,0 0 0,0,0 157.073810415886 0 0 186.712626451855 1.09030780971763 0 177.52416635444 1.14322055456627 10.935 0 0 chimp,cow,dog,elephant,guinea_pig,horse,human,macaque,marmoset,orangutan,pig,rabbit, antisense antisense A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000197522.3 ENST00000541007.1 chr3:187009011-187015708 2 2007 4688 exonic 4.98 0 0,0,0 0 0,0,0 6.54957648231191 64.0571672354949 55.056 9.59591429995017 68.3698805460751 131.143 7.94170403587444 67.2005119453925 132.003 0 1 chimp,human,macaque,marmoset, lincRNA lincRNA A549@0,AG04450@0.853484,BJ@1.30127,GM12878@0.0010035,H1HESC@0.0567415,HELAS3@0.0105605,HEPG2@0.146023,HMEC@0,HSMM@0.0022695,HUVEC@0.006138,K562@0.002445,MCF7@0,NHEK@0,NHLF@0.721962,SKNSHRA@0, 0 0 0 0 ENSG00000228952.1 ENST00000440726.1 chr3:187166633-187167238 2 244 359 intergenic 0.99 1 0,0,0 0 0,0,0 0 0 0 0 0 3.24 0 0 3.012 0 0 chimp,human,macaque,marmoset,orangutan, lincRNA lincRNA A549@0.304793,AG04450@0,BJ@0.0196745,GM12878@0,H1HESC@0.0120805,HELAS3@0,HEPG2@0.017322,HMEC@0,HSMM@0,HUVEC@0,K562@0.029952,MCF7@0.173294,NHEK@0,NHLF@0.0315505,SKNSHRA@0.009223, 0 0 0 0 ENSG00000223401.1 ENST00000450760.1 chr3:187461474-187463208 2 534 1198 exonic 0 0 0,1,1 0 0,0,0 436.250936329588 563.383973288815 283.355 452.591760299625 381.480801335559 234.18 419.743445692884 336.533388981636 237.508 0 0 cat,chimp,cow,dog,elephant,guinea_pig,horse,human,macaque,marmoset,mouse,orangutan,panda,pig,rabbit,rat, lincRNA lincRNA A549@0,AG04450@0.004394,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0.0109325,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000224049.1 ENST00000433178.1 chr3:187513975-187523046 2 606 8463 intergenic -3.38 0 0,0,0 0 0,0,0 234.29702970297 37.6842727165308 0 223.282178217822 34.5596124305802 42.295 223.341584158416 36.0180786954981 45.909 0 0 chimp,cow,dog,elephant,guinea_pig,horse,human,macaque,marmoset,mouse,orangutan,panda,rabbit,rat, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0.00217133,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000224049.1 ENST00000417384.1 chr3:187514043-187522925 3 586 8292 intergenic 2.38 0 0,0,0 0 0,0,0 253.78156996587 37.6126386878919 0 230.902730375427 35.272310660878 42.295 233.534129692833 36.5792329956585 45.909 0 0 cat,chimp,elephant,horse,human,macaque,marmoset,orangutan,panda, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0.00217133,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000236864.1 ENST00000413056.1 chr3:187650552-187664009 2 151 13304 intergenic 0 0 0,0,0 0 0,0,0 0 38.5838093806374 92.91 0 29.8187011425135 92.936 0 31.9655742633794 83.144 0 0 chimp,human,macaque,marmoset,orangutan, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000224187.1 ENST00000423643.1 chr3:187676563-187684755 2 426 7764 intergenic -13.88 0 0,0,0 0 0,0,0 387.610328638498 18.5131375579598 118.989 345.204225352113 18.0945388974755 11.991 332.215962441315 17.3391293147862 13.346 0 0 chimp,dog,guinea_pig,horse,human,macaque,marmoset,mouse,opossum,orangutan,panda, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0.0237665,HMEC@0,HSMM@0,HUVEC@0.00688,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000224187.1 ENST00000446091.1 chr3:187683556-187694195 2 1522 9115 intergenic -0.68 0 0,1,0 0 0,0,0 168.873193166886 24.4741634668129 11.22 79.9507227332457 35.782775644542 37.256 83.8015768725361 32.1601755348327 40.912 0 0 cat,chimp,cow,dog,elephant,horse,human,macaque,marmoset,orangutan,rabbit, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0.0237665,HMEC@0,HSMM@0,HUVEC@0.00688,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000225058.1 ENST00000415940.1 chr3:187715210-187721778 2 425 6141 intergenic -1.98 0 0,0,0 0 0,0,0 0 32.7322911577919 0 10.7623529411765 62.9938120827227 0 10.8894117647059 64.7700700211692 0 0 0 chimp,cow,dog,elephant,guinea_pig,human,macaque,marmoset,orangutan,panda,rabbit, lincRNA lincRNA A549@0.106334,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0.133384,HEPG2@0.712549,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000236412.1 ENST00000444379.1 chr3:187719488-187721194 2 1006 698 intergenic -0.76 0 0,1,0 0 0,0,0 0 0 0 0 0 10.418 0 0 15.374 0 0 chimp,cow,dog,horse,human,macaque,marmoset,orangutan, lincRNA lincRNA A549@0.0121625,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0.0594445,HEPG2@0.128957,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000234238.1 ENST00000449845.1 chr3:187824884-187864808 2 694 39228 intergenic 0 0 0,0,0 0 0,0,0 0 8.16238401142041 0 0 16.9135311512185 0 7.73919308357349 17.3638982359539 0 0 0 cat,chimp,cow,dog,horse,human,macaque,marmoset,panda,pig, lincRNA lincRNA A549@0,AG04450@0,BJ@0.006954,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000224563.1 ENST00000434996.1 chr3:188280026-188286454 2 492 5934 intronic -3.02 0 0,0,1 0 0,0,0 0 67.242500842602 8.58 0 40.2984496124031 6.53 0 46.9614088304685 6.649 0 0 chimp,human,macaque,orangutan, antisense antisense A549@0,AG04450@0.004537,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000234076.1 ENST00000444488.1 chr3:188659504-188665428 2 695 5227 exonic 0 0 0,1,0 0 0,0,0 31.1438848920863 0 233.316 55.7007194244604 10.1312416299981 264.691 85.0028776978417 11.0244882341687 266.177 0 0 cat,chimp,horse,human,macaque,marmoset,orangutan,panda, lincRNA lincRNA A549@0.232661,AG04450@0,BJ@0.061548,GM12878@0,H1HESC@0.372764,HELAS3@0.966778,HEPG2@0.215245,HMEC@0.229111,HSMM@0.242448,HUVEC@0.165215,K562@0,MCF7@0.374063,NHEK@0.201341,NHLF@0.116318,SKNSHRA@0.101556, 0 0 0 0 ENSG00000230115.1 ENST00000425454.1 chr3:188956475-188958383 3 476 1428 exonic -2.06 1 0,0,0 0 0,0,0 122.178571428571 0 0 177.365546218487 0 0 170.46218487395 0 2.673 0 0 chimp,human,macaque,marmoset,opossum,orangutan,platypus, antisense antisense A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000225764.1 ENST00000412203.1 chr3:189838753-189862635 4 726 23150 intronic 2.86 0 0,1,0 0 0,0,0 0 5.99524838012959 128.624 3.16115702479339 9.09408207343413 254.032 3.11157024793388 9.91961123110151 197.226 0 0 chimp,human,macaque,marmoset,orangutan, antisense antisense A549@0.0911625,AG04450@0.0064525,BJ@0,GM12878@0.272937,H1HESC@0.051224,HELAS3@0,HEPG2@0,HMEC@0.151445,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0.181396,NHLF@0,SKNSHRA@0.0031135, 0 0 0 0 ENSG00000228730.1 ENST00000438156.1 chr3:190415712-190416637 2 524 399 intergenic 7.16 0 0,0,0 0 0,0,0 0 0 0 0 0 0 0 0 0 0 0 cat,chimp,dog,elephant,horse,human,macaque,marmoset,orangutan,rabbit, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000233308.1 ENST00000430375.1 chr3:190931080-190952394 6 509 20795 exonic -0.16 1 0,0,1 0 0,0,0 96.188605108055 1.51074777590767 0 132.966601178782 1.16999278672758 0 130.874263261297 203.629574416927 0 0 0 chimp,guinea_pig,human,macaque,marmoset,orangutan,pig, antisense antisense A549@0,AG04450@0.0217605,BJ@0.095203,GM12878@0.531026,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0.0079905,HUVEC@0,K562@0,MCF7@0.003904,NHEK@0.00247867,NHLF@0.124775,SKNSHRA@0, 0 0 0 0 ENSG00000223812.1 ENST00000439804.1 chr3:191275113-191308145 4 897 32129 intergenic 1.47 0 0,0,0 0 0,0,0 0 0.292726197516263 0 0 5.0978866444645 0 0 6.1685393258427 0 0 0 chimp,human,macaque,orangutan, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0.035108,H1HESC@0,HELAS3@0,HEPG2@0.040091,HMEC@0,HSMM@0,HUVEC@0.123084,K562@5.03397,MCF7@0.0122095,NHEK@0.007917,NHLF@0.0021415,SKNSHRA@0.999283, 0 0 0 0 ENSG00000223812.1 ENST00000438488.1 chr3:191286324-191291298 3 491 4479 intergenic 1.47 1 0,1,0 0 0,0,0 0 2.09979906229069 0 0 3.41348515293592 0 0 2.33534271042643 0 0 0 chimp,human,macaque,orangutan, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0.035108,H1HESC@0,HELAS3@0,HEPG2@0.040091,HMEC@0,HSMM@0,HUVEC@0.123084,K562@5.03397,MCF7@0.0122095,NHEK@0.007917,NHLF@0.0021415,SKNSHRA@0.999283, 0 0 0 0 ENSG00000232353.1 ENST00000452657.1 chr3:191747669-191754031 3 487 5871 intergenic -4.64 0 0,1,0 0 0,0,0 0 2.75336399250554 0 0 2.11940044285471 1.434 0 2.19707034576733 1.458 0 0 chimp,elephant,horse,human,macaque,orangutan, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0.004038,MCF7@0.0480485,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000232353.1 ENST00000444729.1 chr3:191747669-191754346 3 669 6004 intergenic -4.64 0 0,1,0 0 0,0,0 0 2.69237175216522 0 0 2.07245169886742 1.434 0 2.14840106595603 1.458 0 0 chimp,human,macaque,orangutan, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0.004038,MCF7@0.0480485,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000232353.1 ENST00000412486.1 chr3:191749998-191754178 2 573 3605 intergenic -4.64 1 0,0,0 0 0,0,0 0 0 0 0 1.63134535367545 2.805 0 1.70568654646325 2.915 0 0 chimp,elephant,human,macaque,marmoset,orangutan,pig, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0.004038,MCF7@0.0480485,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000231383.2 ENST00000530635.1 chr3:191955826-191962776 3 552 6394 intronic -1.05 0 0,0,0 0 0,0,0 0 6.38974038160776 0 0 1.90991554582421 0 0 4.19471379418205 0 0 1 chimp,human, antisense antisense A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000231383.2 ENST00000414920.2 chr3:191956419-192000886 5 575 43884 intronic -0.89 0 0,0,0 0 0,0,0 0 10.0865235621183 0 0 12.1134809953514 0 0 13.8288898003828 0 0 0 chimp,cow,dog,elephant,horse,human,macaque,marmoset,orangutan,rabbit, antisense antisense A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000230126.1 ENST00000443165.1 chr3:192232811-192234362 2 578 971 intronic -1.90 0 0,0,0 0 0,0,0 30.8927335640138 0 84.939 94.9307958477509 2.18125643666323 142.467 93.7733564013841 2.19361483007209 136.325 0 0 chimp,cow,dog,elephant,human,macaque,marmoset,mouse,orangutan,pig,rabbit,rat, antisense antisense A549@0.005815,AG04450@0,BJ@0,GM12878@0,H1HESC@0.126317,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0.0593995,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000226709.1 ENST00000452848.1 chr3:192234620-192239187 2 289 4276 intronic -1.15 0 0,0,0 0 0,0,0 140.76124567474 0 0 180.162629757785 6.66206735266604 0 177.463667820069 5.48175865294668 0 0 0 cat,chimp,dog,elephant,guinea_pig,horse,human,macaque,marmoset,mouse,orangutan,panda, antisense antisense A549@0.009492,AG04450@0,BJ@0,GM12878@0,H1HESC@0.079993,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0.233887,NHEK@0,NHLF@0,SKNSHRA@0.0077965, 0 0 0 0 ENSG00000232130.1 ENST00000414895.1 chr3:192862253-192894653 3 523 31873 intergenic 1.00 0 0,0,1 0 0,0,0 0 5.26495780127381 0 0 40.5312019577699 0 0 81.5872368462335 1.215 0 0 chimp,cow,horse,human,macaque,marmoset,orangutan,panda,rabbit, processed_transcript processed_transcript A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000236508.1 ENST00000414634.1 chr3:193025033-193032151 2 474 6642 exonic 0.31 0 0,0,0 0 0,0,0 165.371308016878 10.0395965070762 0 179.569620253165 16.8836193917495 0 178.911392405063 17.9891598915989 0 0 0 cat,chimp,cow,dog,elephant,horse,human,macaque,marmoset,orangutan,panda,pig, antisense antisense A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0.011442,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000225473.1 ENST00000431512.1 chr3:193271002-193272877 2 392 1481 exonic 6.47 0 0,0,1 0 0,0,0 194.795918367347 78.204591492235 20.584 205.408163265306 151.074274139095 16.451 125.06887755102 146.852802160702 16.584 0 0 cat,chimp,cow,dog,elephant,guinea_pig,horse,human,macaque,marmoset,mouse,orangutan,panda,pig,rabbit,rat, antisense antisense A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000225473.1 ENST00000426459.1 chr3:193271201-193272701 3 792 704 exonic 6.47 0 0,1,1 0 0,0,0 80.1136363636364 96.2173295454545 20.584 106.017676767677 233.397727272727 16.451 94.3623737373737 232.403409090909 16.584 0 0 cat,chimp,cow,dog,elephant,guinea_pig,horse,human,macaque,marmoset,orangutan,panda,pig,rabbit, antisense antisense A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000224855.1 ENST00000433105.1 chr3:193336398-193345121 3 489 8230 exonic 1.72 0 0,0,0 0 0,0,0 60.1717791411043 17.9196840826245 0 99.4723926380368 37.2038882138518 3.57 99.8936605316973 38.9273390036452 6.163 0 0 chimp,cow,dog,elephant,guinea_pig,horse,human,macaque,marmoset,mouse,orangutan,panda,pig,rabbit,rat, antisense antisense A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000224855.1 ENST00000444085.1 chr3:193336398-193345126 2 409 8317 exonic -1.45 0 0,0,0 0 0,0,0 20.1075794621027 20.3130936635806 0 118.929095354523 36.8147168450162 4.845 119.432762836186 38.5201394733678 6.163 0 0 cat,chimp,cow,dog,elephant,horse,human,macaque,marmoset,mouse,orangutan,panda,pig,rabbit,rat, antisense antisense A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000229155.1 ENST00000439074.1 chr3:193560349-193561798 3 699 746 intergenic 7.45 0 0,0,0 0 0,0,0 57.5107296137339 0 78.792 133.666666666667 0 74.566 138.397711015737 0 82.952 0 0 cat,chimp,dog,elephant,human,macaque,marmoset,orangutan, lincRNA processed_transcript A549@0.0485315,AG04450@0.004092,BJ@0,GM12878@0.016454,H1HESC@0,HELAS3@0.02973,HEPG2@0.0412445,HMEC@0,HSMM@0,HUVEC@0.003804,K562@0.341122,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000229155.1 ENST00000445168.1 chr3:193560600-193561813 2 786 425 intergenic -2.88 0 0,0,0 0 0,0,0 58.8167938931298 0 72.762 27.4592875318066 0 70.416 33.2201017811705 0 77.772 0 0 cat,chimp,human,macaque,marmoset,orangutan, lincRNA processed_transcript A549@0.0485315,AG04450@0.004092,BJ@0,GM12878@0.016454,H1HESC@0,HELAS3@0.02973,HEPG2@0.0412445,HMEC@0,HSMM@0,HUVEC@0.003804,K562@0.341122,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000214146.2 ENST00000397645.2 chr3:193675161-193721448 3 1612 44671 intergenic 0.96 1 0,1,0 0 0,0,0 27.5955334987593 33.086364755658 7.453 7.58808933002481 31.4549036287524 8.417 10.5490074441687 31.6363860222516 8.155 0 0 cat,chimp,cow,horse,human,macaque,marmoset,orangutan,rabbit, lincRNA processed_transcript A549@0.561887,AG04450@0.001388,BJ@0.0083835,GM12878@0,H1HESC@0.069784,HELAS3@0.109729,HEPG2@0.06467,HMEC@0.002535,HSMM@0,HUVEC@0.234503,K562@0.036731,MCF7@0.027197,NHEK@0.015748,NHLF@0,SKNSHRA@0.046518, 0 0 0 0 ENSG00000238043.1 ENST00000426616.1 chr3:193698403-193723887 3 563 24917 intergenic 6.14 0 0,1,1 0 0,0,0 0 24.627884576795 45.36 3.92184724689165 25.7802704980535 21.886 3.95026642984014 26.0285748685636 30.309 0 0 cat,chimp,cow,elephant,human,macaque,marmoset,orangutan,panda,rabbit, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0.0085915,K562@0,MCF7@0.003552,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000214146.2 ENST00000414309.1 chr3:193719646-193721425 2 770 1007 intergenic 0.59 0 0,1,1 0 0,0,0 0 96.9056603773585 7.453 0 143.730883813307 8.417 0 139.890764647468 8.155 0 0 cat,chimp,elephant,horse,human,macaque,marmoset,orangutan, lincRNA processed_transcript A549@0.561887,AG04450@0.001388,BJ@0.0083835,GM12878@0,H1HESC@0.069784,HELAS3@0.109729,HEPG2@0.06467,HMEC@0.002535,HSMM@0,HUVEC@0.234503,K562@0.036731,MCF7@0.027197,NHEK@0.015748,NHLF@0,SKNSHRA@0.046518, 0 0 0 0 ENSG00000230102.1 ENST00000458224.1 chr3:193723245-193788759 3 430 65080 intergenic 0 0 0,1,0 0 0,0,0 0 18.3640288875231 15.934 0 12.9101567301782 146.549 8.43255813953488 14.8763368162262 185.856 0 0 chimp,human,macaque,marmoset,orangutan,rabbit, lincRNA processed_transcript A549@0.005794,AG04450@0,BJ@0,GM12878@0.0125155,H1HESC@0.015152,HELAS3@0.03943,HEPG2@0.011066,HMEC@0.003072,HSMM@0,HUVEC@0.0010015,K562@0.0132915,MCF7@0.072006,NHEK@0.005846,NHLF@0,SKNSHRA@0.0057745, 0 0 0 0 ENSG00000230102.1 ENST00000449350.1 chr3:193727965-193788741 4 697 60073 intergenic 0.58 0 0,1,0 0 0,0,0 0 18.1781332711867 15.934 5.1219512195122 12.8521132621977 146.549 10.4045911047346 14.8356166663892 185.856 0 0 chimp,elephant,horse,human,macaque,marmoset,orangutan,rabbit, lincRNA processed_transcript A549@0.005794,AG04450@0,BJ@0,GM12878@0.0125155,H1HESC@0.015152,HELAS3@0.03943,HEPG2@0.011066,HMEC@0.003072,HSMM@0,HUVEC@0.0010015,K562@0.0132915,MCF7@0.072006,NHEK@0.005846,NHLF@0,SKNSHRA@0.0057745, 0 0 0 0 ENSG00000230102.1 ENST00000420947.1 chr3:193733232-193775468 5 523 41705 intergenic 0.58 0 0,0,1 0 0,0,0 0.535372848948375 14.3330535906966 33.015 75.3556405353729 12.6463014027095 41.145 83.3900573613767 13.4849538424649 43.569 0 0 chimp,cow,horse,human,macaque,marmoset,orangutan,panda,rabbit, lincRNA processed_transcript A549@0.005794,AG04450@0,BJ@0,GM12878@0.0125155,H1HESC@0.015152,HELAS3@0.03943,HEPG2@0.011066,HMEC@0.003072,HSMM@0,HUVEC@0.0010015,K562@0.0132915,MCF7@0.072006,NHEK@0.005846,NHLF@0,SKNSHRA@0.0057745, 0 0 0 0 ENSG00000230102.1 ENST00000432154.1 chr3:193766709-193787318 4 2662 17941 intergenic -1.16 1 0,0,0 0 0,0,0 58.3350864012021 30.9076417145087 0 28.1359879789632 21.8195752745109 0 27.7806160781367 24.9370715121788 1.004 0 0 human, lincRNA processed_transcript A549@0.005794,AG04450@0,BJ@0,GM12878@0.0125155,H1HESC@0.015152,HELAS3@0.03943,HEPG2@0.011066,HMEC@0.003072,HSMM@0,HUVEC@0.0010015,K562@0.0132915,MCF7@0.072006,NHEK@0.005846,NHLF@0,SKNSHRA@0.0057745, 0 0 0 0 ENSG00000230102.1 ENST00000443776.1 chr3:193770170-193776266 4 449 5641 intergenic -6.64 0 0,0,0 0 0,0,0 33.2071269487751 34.7027122850558 121.54 51.5077951002227 13.7011168232583 55.137 56.8440979955457 14.0097500443184 55.134 0 0 chimp,human,macaque,marmoset,orangutan, lincRNA processed_transcript A549@0.005794,AG04450@0,BJ@0,GM12878@0.0125155,H1HESC@0.015152,HELAS3@0.03943,HEPG2@0.011066,HMEC@0.003072,HSMM@0,HUVEC@0.0010015,K562@0.0132915,MCF7@0.072006,NHEK@0.005846,NHLF@0,SKNSHRA@0.0057745, 0 0 0 0 ENSG00000229964.1 ENST00000457815.1 chr3:193809350-193826963 2 404 17207 intergenic 0 0 0,1,0 0 0,0,0 0 29.9325274597548 20.72 0 32.8059510664265 0 10.2252475247525 32.4606264892195 0 0 0 chimp,horse,human,macaque,marmoset,orangutan, lincRNA lincRNA A549@0.0136065,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0.0266835,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0.00650367,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000232874.1 ENST00000418353.1 chr3:193848405-193848990 2 428 155 intergenic -5.88 1 1,1,1 0 0,0,0 156.535046728972 563 131.179 89.7172897196262 513.077419354839 60.611 93.5677570093458 320.967741935484 65.616 0 0 cat,chimp,cow,elephant,horse,human,macaque,marmoset,orangutan,panda,rabbit, antisense antisense A549@0.534547,AG04450@0.061783,BJ@0.186505,GM12878@0.123617,H1HESC@0.189792,HELAS3@0.838109,HEPG2@0.661853,HMEC@0,HSMM@0,HUVEC@0.35804,K562@0.14279,MCF7@0.247122,NHEK@0.012274,NHLF@0,SKNSHRA@0.109529, 0 0 0 0 ENSG00000225742.1 ENST00000415869.1 chr3:193920805-193967942 3 907 46226 intergenic 2.51 1 0,0,1 0 0,0,0 0 25.522087137109 260.202 0 20.4268377103794 176.654 0 22.4691082940337 167.648 0 0 chimp,cow,dog,human,macaque,marmoset,orangutan,panda, lincRNA lincRNA A549@0.0125765,AG04450@0,BJ@0,GM12878@0.0032135,H1HESC@0.171548,HELAS3@0,HEPG2@0,HMEC@0.108833,HSMM@0,HUVEC@0.038544,K562@0.0076545,MCF7@0.0310805,NHEK@0.007812,NHLF@0,SKNSHRA@0.03535, 0 0 0 0 ENSG00000225742.1 ENST00000432908.1 chr3:193921269-193924096 3 405 2418 intergenic 1.76 0 0,0,0 0 0,0,0 13.9333333333333 106.160463192721 25.048 0 111.272539288668 9.102 2.4 139.494623655914 14.063 0 0 chimp,horse,human,macaque,marmoset,orangutan,panda, lincRNA lincRNA A549@0.0125765,AG04450@0,BJ@0,GM12878@0.0032135,H1HESC@0.171548,HELAS3@0,HEPG2@0,HMEC@0.108833,HSMM@0,HUVEC@0.038544,K562@0.0076545,MCF7@0.0310805,NHEK@0.007812,NHLF@0,SKNSHRA@0.03535, 0 0 0 0 ENSG00000238097.1 ENST00000455821.1 chr3:193965437-193975561 4 1191 8927 intergenic 10.57 0 0,0,0 0 0,0,0 0 35.7144617452672 0 5.46431570109152 23.975915761174 6.072 5.16036943744752 23.867928755461 6.322 0 0 cat,chimp,dog,horse,human,macaque,marmoset,orangutan, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0.0279435,HEPG2@0.01449,HMEC@0,HSMM@0.0034435,HUVEC@0,K562@0.0041105,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0.684879, 0 0 0 0 ENSG00000228271.1 ENST00000440556.1 chr3:193994471-194005157 3 1768 8914 intergenic 2.45 0 0,0,0 0 0,0,0 230.171945701357 11.1843168050258 0 139.558823529412 7.56394435719094 0 154.381221719457 8.63349786852143 0 0 0 cat,chimp,cow,horse,human,macaque,marmoset,orangutan, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0.001678,HELAS3@0,HEPG2@0.001203,HMEC@0.002312,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0.0092675, 0 0 0 0 ENSG00000214145.2 ENST00000456816.1 chr3:194014254-194030493 4 792 15441 intergenic 2.18 1 0,0,1 0 0,0,0 83.2323232323232 10.5535910886601 51.615 44.0997474747475 13.6254776245062 4.14 47.8017676767677 14.3962826241824 4.26 0 0 chimp,human,macaque,marmoset,orangutan,rat, lincRNA lincRNA A549@0.613152,AG04450@0.009451,BJ@0.0017095,GM12878@0.017413,H1HESC@0.0312655,HELAS3@0.249549,HEPG2@0.030109,HMEC@0.033608,HSMM@0,HUVEC@0.0327475,K562@0.0009465,MCF7@0.300375,NHEK@0.0159683,NHLF@0,SKNSHRA@0.0841795, 0 0 0 0 ENSG00000214145.2 ENST00000429578.1 chr3:194017424-194030592 6 1711 11447 intergenic 0.50 0 0,1,0 0 0,0,0 0 14.235869660173 51.615 0 17.9813925045864 4.14 0 18.0965318424041 5.67 0 0 chimp,human,macaque,orangutan, lincRNA lincRNA A549@0.613152,AG04450@0.009451,BJ@0.0017095,GM12878@0.017413,H1HESC@0.0312655,HELAS3@0.249549,HEPG2@0.030109,HMEC@0.033608,HSMM@0,HUVEC@0.0327475,K562@0.0009465,MCF7@0.300375,NHEK@0.0159683,NHLF@0,SKNSHRA@0.0841795, 0 0 0 0 ENSG00000214145.2 ENST00000414120.1 chr3:194018988-194030589 4 2876 8719 intergenic 5.75 1 0,1,0 0 0,0,0 0 18.6899873838743 51.615 0 20.8003211377452 4.14 0 19.7245096914784 5.67 0 0 chimp,human,orangutan, lincRNA lincRNA A549@0.613152,AG04450@0.009451,BJ@0.0017095,GM12878@0.017413,H1HESC@0.0312655,HELAS3@0.249549,HEPG2@0.030109,HMEC@0.033608,HSMM@0,HUVEC@0.0327475,K562@0.0009465,MCF7@0.300375,NHEK@0.0159683,NHLF@0,SKNSHRA@0.0841795, 0 0 0 0 ENSG00000214145.2 ENST00000397644.2 chr3:194019235-194023820 2 414 4169 intergenic 3.51 0 0,0,1 0 0,0,0 0 0 0 0 0 13.204 0 0 24.115 0 0 chimp,horse,human,macaque,marmoset,orangutan, lincRNA lincRNA A549@0.613152,AG04450@0.009451,BJ@0.0017095,GM12878@0.017413,H1HESC@0.0312655,HELAS3@0.249549,HEPG2@0.030109,HMEC@0.033608,HSMM@0,HUVEC@0.0327475,K562@0.0009465,MCF7@0.300375,NHEK@0.0159683,NHLF@0,SKNSHRA@0.0841795, 0 0 0 0 ENSG00000233058.1 ENST00000448892.1 chr3:194208183-194239008 3 2677 28144 exonic 6.53 0 0,1,0 0 0,0,0 11.7523347030258 2.81651506537806 0 10.2062009712365 5.46610289937465 81.829 10.6548375046694 11.0099133030131 116.856 0 0 human,macaque,orangutan, lincRNA processed_transcript A549@0.0202155,AG04450@0.170172,BJ@0.091394,GM12878@0.66748,H1HESC@0.245033,HELAS3@0.0940285,HEPG2@0.073167,HMEC@0.024446,HSMM@0.099296,HUVEC@0.069162,K562@0.45784,MCF7@0.0217365,NHEK@0.021193,NHLF@0.130455,SKNSHRA@0.304645, 0 0 0 0 ENSG00000233058.1 ENST00000437597.1 chr3:194218688-194231376 2 417 12269 exonic 0.47 0 0,1,0 0 0,0,0 23.1654676258993 4.28087048659222 31.411 39.6834532374101 8.65628820604776 18.377 39.9856115107914 9.17483087456191 20.979 0 0 chimp,cow,horse,human,macaque,marmoset,mouse,orangutan,rat, lincRNA processed_transcript A549@0.0202155,AG04450@0.170172,BJ@0.091394,GM12878@0.66748,H1HESC@0.245033,HELAS3@0.0940285,HEPG2@0.073167,HMEC@0.024446,HSMM@0.099296,HUVEC@0.069162,K562@0.45784,MCF7@0.0217365,NHEK@0.021193,NHLF@0.130455,SKNSHRA@0.304645, 0 0 0 0 ENSG00000231770.1 ENST00000453671.1 chr3:194304740-194310989 4 1115 5128 intronic 5.08 1 1,1,1 1 0,0,0 0 3.6801872074883 0 3.42959641255605 4.38338533541342 5.979 3.48699551569507 5.30382215288612 6.111 0 0 chimp,elephant,human,macaque,marmoset,orangutan, antisense antisense A549@0.446337,AG04450@0.251116,BJ@0.358744,GM12878@0.422999,H1HESC@0.282254,HELAS3@2.3724,HEPG2@0.759626,HMEC@0.253734,HSMM@0.234795,HUVEC@0.297278,K562@0.333978,MCF7@1.12214,NHEK@0.158901,NHLF@0.326234,SKNSHRA@0.831988, 0 0 0 0 ENSG00000231770.1 ENST00000447982.1 chr3:194304911-194310978 4 929 5132 intronic 5.08 1 0,1,1 0 0,0,0 0 3.67731878409977 0 4.11625403659849 4.37996882307093 5.979 4.18514531754575 5.29968823070928 6.111 0 0 chimp,elephant,human,macaque,marmoset,orangutan, antisense antisense A549@0.446337,AG04450@0.251116,BJ@0.358744,GM12878@0.422999,H1HESC@0.282254,HELAS3@2.3724,HEPG2@0.759626,HMEC@0.253734,HSMM@0.234795,HUVEC@0.297278,K562@0.333978,MCF7@1.12214,NHEK@0.158901,NHLF@0.326234,SKNSHRA@0.831988, 0 0 0 0 ENSG00000231770.1 ENST00000419571.1 chr3:194305028-194310978 3 660 5286 intronic 5.08 1 0,1,1 0 0,0,0 0 3.57018539538403 0 5.79393939393939 4.25236473704124 5.979 5.89090909090909 5.14528944381385 6.111 0 0 chimp,elephant,human,macaque,marmoset,orangutan,pig,rabbit, antisense antisense A549@0.446337,AG04450@0.251116,BJ@0.358744,GM12878@0.422999,H1HESC@0.282254,HELAS3@2.3724,HEPG2@0.759626,HMEC@0.253734,HSMM@0.234795,HUVEC@0.297278,K562@0.333978,MCF7@1.12214,NHEK@0.158901,NHLF@0.326234,SKNSHRA@0.831988, 0 0 0 0 ENSG00000229334.1 ENST00000447139.1 chr3:194353652-194366130 2 970 11506 exonic 0.60 1 1,1,1 0 0,0,0 53.6659793814433 9.64540239874848 0 82.0690721649485 12.2993220928211 10.167 82.4649484536083 18.0356335824787 10.163 0 0 chimp,human,macaque,marmoset,orangutan, antisense antisense A549@0.610253,AG04450@1.48358,BJ@1.00201,GM12878@0,H1HESC@0.459794,HELAS3@0.858752,HEPG2@0.23861,HMEC@1.58393,HSMM@1.26814,HUVEC@2.57794,K562@0.491259,MCF7@0.539396,NHEK@1.27523,NHLF@1.18435,SKNSHRA@0.635943, 0 0 0 0 ENSG00000233987.1 ENST00000439479.1 chr3:194426277-194427693 2 554 860 intergenic 2.75 0 0,0,1 0 0,0,0 0 0 94.668 0 0 18.57 0 6.62790697674419 22.719 0 0 chimp,cow,human,macaque,marmoset,orangutan,pig, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0.050288,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000237222.2 ENST00000423318.1 chr3:194429150-194502897 4 3643 70098 intergenic 1.40 0 0,1,0 0 0,0,0 0 3.47850152643442 0 7.59676091133681 4.09819110388313 0 8.76228383200659 11.2671973522782 234.013 0 0 chimp,human,macaque, processed_transcript processed_transcript A549@0.0135565,AG04450@0,BJ@0,GM12878@0.002651,H1HESC@0.0466235,HELAS3@0.0159225,HEPG2@0.0066815,HMEC@0.001123,HSMM@0,HUVEC@0.020936,K562@0,MCF7@0.011163,NHEK@0.00157433,NHLF@0,SKNSHRA@0.0013855, 0 0 0 0 ENSG00000237222.2 ENST00000454508.1 chr3:194429769-194430918 3 404 741 intergenic -16.91 0 0,0,0 0 0,0,0 0 0 0 14.4108910891089 0 0 14.5866336633663 8.85425101214575 0 0 0 chimp,human,macaque,marmoset,orangutan, processed_transcript processed_transcript A549@0.0135565,AG04450@0,BJ@0,GM12878@0.002651,H1HESC@0.0466235,HELAS3@0.0159225,HEPG2@0.0066815,HMEC@0.001123,HSMM@0,HUVEC@0.020936,K562@0,MCF7@0.011163,NHEK@0.00157433,NHLF@0,SKNSHRA@0.0013855, 0 0 0 0 ENSG00000230401.1 ENST00000422271.1 chr3:194485967-194489441 3 550 2920 intergenic -9.27 0 0,0,1 0 0,0,0 0 0 0 0 3.11917808219178 0 0 3.91643835616438 0 0 0 chimp,human,macaque,marmoset,orangutan, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000244576.1 ENST00000455796.1 chr3:194489535-194500387 4 428 10418 intergenic 3.47 0 0,0,0 0 0,0,0 0 0 0 0 3.24160107506239 0 0 3.46736417738529 0 0 0 chimp,cow,human,macaque,marmoset,orangutan,panda, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000240295.1 ENST00000415410.1 chr3:194500958-194502106 2 547 599 intergenic 1.40 0 0,0,1 0 0,0,0 0 0 0 0 0 14.059 0 0 17.831 0 0 chimp,horse,human,macaque,marmoset,orangutan,pig,rabbit, lincRNA lincRNA A549@0.009462,AG04450@0,BJ@0,GM12878@0,H1HESC@0.0100745,HELAS3@0.000768,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0.0013855,K562@0,MCF7@0.006391,NHEK@0.00508833,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000238031.1 ENST00000427064.1 chr3:194548619-194553321 3 461 4237 intergenic -2.43 0 0,0,0 0 0,0,0 0 0 0 5.9175704989154 0.760915742270474 0 5.98915401301518 0.81307528911966 0 0 0 chimp,guinea_pig,horse,human,macaque,marmoset,orangutan,panda,pig, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000233303.1 ENST00000458531.1 chr3:194815317-194816786 4 427 1036 intronic 2.38 0 0,0,0 0 0,0,0 0 0 0 0 0 0 0 0 0 0 0 chimp,human,macaque,marmoset,orangutan, antisense antisense A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0.0240595,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0.00592367,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000230266.1 ENST00000447975.1 chr3:194868600-194873519 2 782 4135 intronic -0.11 0 1,1,1 1 0,0,0 0 4.19830713422007 0 10.7058823529412 5.76348246674728 1.736 11.1496163682864 6.01015719467956 1.813 0 0 chimp,human,macaque,orangutan, antisense antisense A549@0,AG04450@0,BJ@0.0677135,GM12878@1.45708,H1HESC@0.007938,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@1.94438,K562@0.0275365,MCF7@0,NHEK@0,NHLF@0.0669205,SKNSHRA@0, 0 0 0 0 ENSG00000230266.1 ENST00000426468.1 chr3:194868620-194873192 2 420 4150 intronic -5.52 0 0,1,0 1 0,0,0 0 4.18313253012048 0 0 5.74265060240964 1.736 0 5.98843373493976 1.813 0 0 chimp,cow,horse,human,macaque,orangutan,panda, antisense antisense A549@0,AG04450@0,BJ@0.0677135,GM12878@1.45708,H1HESC@0.007938,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@1.94438,K562@0.0275365,MCF7@0,NHEK@0,NHLF@0.0669205,SKNSHRA@0, 0 0 0 0 ENSG00000229325.1 ENST00000419899.1 chr3:195001452-195003470 2 688 1328 intronic -6.79 0 0,1,0 0 0,0,0 289.313953488372 180.048945783133 8.36 168.760174418605 186.22515060241 15.098 167.928779069767 186.010542168675 18.002 0 0 cat,chimp,cow,dog,elephant,guinea_pig,horse,human,macaque,marmoset,mouse,orangutan,panda,rabbit,rat, sense_intronic sense_intronic A549@0.077338,AG04450@0.153483,BJ@0.0459555,GM12878@0.418016,H1HESC@0.0792335,HELAS3@0.181651,HEPG2@0.033003,HMEC@0.035729,HSMM@0.030064,HUVEC@0.0558885,K562@0.467649,MCF7@0.173614,NHEK@0.10541,NHLF@0.0446395,SKNSHRA@0.155964, 0 0 0 0 ENSG00000223711.1 ENST00000426109.1 chr3:195270871-195273479 2 297 2309 intergenic 0 0 0,0,0 0 0,0,0 0 0 13.489 9.09090909090909 15.1082719792118 38.172 9.36026936026936 17.7505413598961 36.965 0 0 cat,chimp,dog,human,macaque,marmoset,orangutan,panda,pig,rabbit, antisense antisense A549@0.0053595,AG04450@0.005815,BJ@0.007977,GM12878@0,H1HESC@0.0135675,HELAS3@0.106429,HEPG2@0.0206395,HMEC@0.018654,HSMM@0.012813,HUVEC@0.022489,K562@0,MCF7@0.020643,NHEK@0.0177957,NHLF@0,SKNSHRA@0.0305875, 0 0 0 0 ENSG00000223711.1 ENST00000417011.1 chr3:195273222-195277400 2 808 3368 intergenic 3.82 0 0,1,0 0 0,0,0 0 0 0 10.0990099009901 0.624703087885986 8.569 10.5618811881188 3.28859857482185 13.315 0 0 chimp,guinea_pig,horse,human,macaque,marmoset,orangutan,panda,pig,rabbit, antisense antisense A549@0.0053595,AG04450@0.005815,BJ@0.007977,GM12878@0,H1HESC@0.0135675,HELAS3@0.106429,HEPG2@0.0206395,HMEC@0.018654,HSMM@0.012813,HUVEC@0.022489,K562@0,MCF7@0.020643,NHEK@0.0177957,NHLF@0,SKNSHRA@0.0305875, 0 0 0 0 ENSG00000223711.1 ENST00000415451.1 chr3:195273419-195274285 2 437 427 intergenic -0.55 0 0,0,0 0 0,0,0 0 0 0 0 4.92740046838408 13.159 0 25.9391100702576 18.041 0 0 cat,chimp,cow,horse,human,macaque,marmoset,orangutan,panda,pig,rabbit, antisense antisense A549@0.0053595,AG04450@0.005815,BJ@0.007977,GM12878@0,H1HESC@0.0135675,HELAS3@0.106429,HEPG2@0.0206395,HMEC@0.018654,HSMM@0.012813,HUVEC@0.022489,K562@0,MCF7@0.020643,NHEK@0.0177957,NHLF@0,SKNSHRA@0.0305875, 0 0 0 0 ENSG00000249796.1 ENST00000506405.1 chr3:195351223-195356372 2 1469 3678 intronic 5.48 0 0,1,0 0 0,0,0 0 0 0 0 0 0 0 0 0 0 1 chimp,human,marmoset,orangutan, lincRNA lincRNA A549@0.050168,AG04450@0.003035,BJ@0.000739,GM12878@0.001247,H1HESC@0.00704,HELAS3@0.006481,HEPG2@0.011193,HMEC@0,HSMM@0,HUVEC@0,K562@0.011562,MCF7@0.0698005,NHEK@0.000375,NHLF@0.0054695,SKNSHRA@0.014056, 90 2 51 2 ENSG00000229178.1 ENST00000423600.1 chr3:195382436-195384798 3 1681 677 intronic 1.33 0 0,1,0 0 0,0,0 0 0 0 0 0 2.629 0 0 2.673 0 0 chimp,human,orangutan, lincRNA processed_transcript A549@0.0661325,AG04450@0.04939,BJ@0.026216,GM12878@0.1782,H1HESC@0.0633085,HELAS3@0.10154,HEPG2@0.0949055,HMEC@0.026746,HSMM@0.0027075,HUVEC@0.0210025,K562@0.24881,MCF7@0.24289,NHEK@0.00620933,NHLF@0.01496,SKNSHRA@0.193222, 0 0 0 0 ENSG00000242086.2 ENST00000431767.1 chr3:195415518-195438541 4 482 22535 intronic 7.89 0 0,0,0 0 0,0,0 23.7344398340249 2.06398934990016 0 91.4253112033195 2.26012868870646 0 85.6369294605809 5.47663634346572 189.121 0 0 chimp,cow,elephant,guinea_pig,horse,human,mouse,orangutan,pig,rabbit, processed_transcript processed_transcript A549@7.63021,AG04450@4.1027,BJ@6.48756,GM12878@4.14166,H1HESC@0.436963,HELAS3@4.61881,HEPG2@4.45146,HMEC@2.02481,HSMM@1.26229,HUVEC@0.207864,K562@10.295,MCF7@2.54769,NHEK@1.72435,NHLF@1.0815,SKNSHRA@2.69177, 0 0 0 0 ENSG00000242086.2 ENST00000420851.1 chr3:195415610-195438560 5 508 22434 intronic 5.60 0 0,1,0 0 0,0,0 22.5196850393701 2.07328162610324 0 86.746062992126 2.27030400285281 0 81.253937007874 5.50129268075243 143.213 0 0 chimp,dog,guinea_pig,horse,human,marmoset,orangutan,panda,pig,rabbit, processed_transcript processed_transcript A549@7.63021,AG04450@4.1027,BJ@6.48756,GM12878@4.14166,H1HESC@0.436963,HELAS3@4.61881,HEPG2@4.45146,HMEC@2.02481,HSMM@1.26229,HUVEC@0.207864,K562@10.295,MCF7@2.54769,NHEK@1.72435,NHLF@1.0815,SKNSHRA@2.69177, 0 0 0 0 ENSG00000242086.2 ENST00000451228.1 chr3:195416246-195438746 4 600 21894 intronic 5.60 1 0,1,1 0 0,0,0 19.0666666666667 2.12441764867087 0 73.445 2.32629944276971 0 68.795 5.63697816753448 0 0 0 cat,chimp,cow,dog,elephant,guinea_pig,horse,human,marmoset,mouse,orangutan,panda,pig,rabbit,rat, processed_transcript processed_transcript A549@7.63021,AG04450@4.1027,BJ@6.48756,GM12878@4.14166,H1HESC@0.436963,HELAS3@4.61881,HEPG2@4.45146,HMEC@2.02481,HSMM@1.26229,HUVEC@0.207864,K562@10.295,MCF7@2.54769,NHEK@1.72435,NHLF@1.0815,SKNSHRA@2.69177, 0 0 0 0 ENSG00000242086.2 ENST00000451982.1 chr3:195423293-195428455 3 548 4610 intronic 1.76 0 0,0,1 0 0,0,0 0 0 0 12.6058394160584 0 0 17.786496350365 0 0 0 1 chimp,human,marmoset,orangutan, processed_transcript processed_transcript A549@7.63021,AG04450@4.1027,BJ@6.48756,GM12878@4.14166,H1HESC@0.436963,HELAS3@4.61881,HEPG2@4.45146,HMEC@2.02481,HSMM@1.26229,HUVEC@0.207864,K562@10.295,MCF7@2.54769,NHEK@1.72435,NHLF@1.0815,SKNSHRA@2.69177, 0 0 0 0 ENSG00000242086.2 ENST00000438608.1 chr3:195426019-195438552 4 521 12006 intronic 5.60 0 0,1,0 0 0,0,0 21.957773512476 0 0 84.5815738963532 4.24221222721972 0 79.2264875239923 6.10836248542395 0 0 0 cat,chimp,cow,elephant,guinea_pig,horse,human,macaque,marmoset,mouse,orangutan,panda,pig, processed_transcript processed_transcript A549@7.63021,AG04450@4.1027,BJ@6.48756,GM12878@4.14166,H1HESC@0.436963,HELAS3@4.61881,HEPG2@4.45146,HMEC@2.02481,HSMM@1.26229,HUVEC@0.207864,K562@10.295,MCF7@2.54769,NHEK@1.72435,NHLF@1.0815,SKNSHRA@2.69177, 0 0 0 0 ENSG00000242086.2 ENST00000445707.1 chr3:195427192-195438745 3 2359 9190 intronic 5.60 1 0,0,1 0 0,0,0 4.84951250529886 0 0 25.3247138618059 3.80457018498368 0 29.6846121237813 4.81599564744287 0 0 1 chimp,human,orangutan, processed_transcript processed_transcript A549@7.63021,AG04450@4.1027,BJ@6.48756,GM12878@4.14166,H1HESC@0.436963,HELAS3@4.61881,HEPG2@4.45146,HMEC@2.02481,HSMM@1.26229,HUVEC@0.207864,K562@10.295,MCF7@2.54769,NHEK@1.72435,NHLF@1.0815,SKNSHRA@2.69177, 0 0 0 0 ENSG00000242086.2 ENST00000432194.2 chr3:195428510-195449395 4 281 20598 intronic 5.65 0 0,1,0 0 0,0,0 40.711743772242 0 0 166.903914590747 2.93086707447325 10.94 164.921708185053 25.7615302456549 20.709 0 0 cat,chimp,cow,dog,elephant,guinea_pig,horse,human,marmoset,mouse,orangutan,panda,pig,rabbit,rat, processed_transcript processed_transcript A549@7.63021,AG04450@4.1027,BJ@6.48756,GM12878@4.14166,H1HESC@0.436963,HELAS3@4.61881,HEPG2@4.45146,HMEC@2.02481,HSMM@1.26229,HUVEC@0.207864,K562@10.295,MCF7@2.54769,NHEK@1.72435,NHLF@1.0815,SKNSHRA@2.69177, 0 0 0 0 ENSG00000242086.2 ENST00000451216.1 chr3:195435001-195435680 3 284 391 intronic 4.46 0 0,0,0 0 0,0,0 40.2816901408451 0 0 148.556338028169 0 3.824 137.764084507042 1.92583120204604 4.016 0 0 cat,chimp,cow,dog,elephant,horse,human,macaque,marmoset,orangutan,panda,pig, processed_transcript processed_transcript A549@7.63021,AG04450@4.1027,BJ@6.48756,GM12878@4.14166,H1HESC@0.436963,HELAS3@4.61881,HEPG2@4.45146,HMEC@2.02481,HSMM@1.26229,HUVEC@0.207864,K562@10.295,MCF7@2.54769,NHEK@1.72435,NHLF@1.0815,SKNSHRA@2.69177, 0 0 0 0 ENSG00000242086.2 ENST00000420459.1 chr3:195435002-195438746 3 540 3200 intronic 5.60 1 0,0,1 0 0,0,0 21.1851851851852 0 0 83.7388888888889 2.620625 3.824 78.5777777777778 3.86375 4.016 0 0 cow,dog,guinea_pig,horse,human,macaque,marmoset,mouse,orangutan,panda,pig,rabbit,rat, processed_transcript processed_transcript A549@7.63021,AG04450@4.1027,BJ@6.48756,GM12878@4.14166,H1HESC@0.436963,HELAS3@4.61881,HEPG2@4.45146,HMEC@2.02481,HSMM@1.26229,HUVEC@0.207864,K562@10.295,MCF7@2.54769,NHEK@1.72435,NHLF@1.0815,SKNSHRA@2.69177, 0 0 0 0 ENSG00000242086.2 ENST00000424730.1 chr3:195435005-195438552 4 427 3114 intronic 6.46 0 0,0,0 0 0,0,0 26.7915690866511 0 0 103.201405152225 2.69299935773924 4.976 96.6674473067916 3.97045600513809 5.171 0 0 cat,chimp,cow,dog,elephant,horse,human,macaque,marmoset,orangutan,panda,pig,rabbit, processed_transcript processed_transcript A549@7.63021,AG04450@4.1027,BJ@6.48756,GM12878@4.14166,H1HESC@0.436963,HELAS3@4.61881,HEPG2@4.45146,HMEC@2.02481,HSMM@1.26229,HUVEC@0.207864,K562@10.295,MCF7@2.54769,NHEK@1.72435,NHLF@1.0815,SKNSHRA@2.69177, 0 0 0 0 ENSG00000242086.2 ENST00000417704.1 chr3:195435018-195438746 3 691 3033 intronic 5.60 1 0,0,1 0 0,0,0 16.5557163531114 0 0 56.548480463097 2.76491922189252 9.968 53.0492040520984 4.07649192218925 10.176 0 0 cow,guinea_pig,horse,human,macaque,marmoset,orangutan,panda,pig,rabbit,rat, processed_transcript processed_transcript A549@7.63021,AG04450@4.1027,BJ@6.48756,GM12878@4.14166,H1HESC@0.436963,HELAS3@4.61881,HEPG2@4.45146,HMEC@2.02481,HSMM@1.26229,HUVEC@0.207864,K562@10.295,MCF7@2.54769,NHEK@1.72435,NHLF@1.0815,SKNSHRA@2.69177, 0 0 0 0 ENSG00000242086.2 ENST00000432601.1 chr3:195435474-195438746 2 547 2723 intronic 5.60 1 0,0,1 0 0,0,0 0 0 11.44 21.2084095063985 3.07969151670951 37.826 22.2833638025594 4.2640470069776 35.397 0 0 cow,dog,horse,human,macaque,marmoset,mouse,orangutan,panda,pig,rabbit,rat, processed_transcript processed_transcript A549@7.63021,AG04450@4.1027,BJ@6.48756,GM12878@4.14166,H1HESC@0.436963,HELAS3@4.61881,HEPG2@4.45146,HMEC@2.02481,HSMM@1.26229,HUVEC@0.207864,K562@10.295,MCF7@2.54769,NHEK@1.72435,NHLF@1.0815,SKNSHRA@2.69177, 0 0 0 0 ENSG00000223783.1 ENST00000444346.1 chr3:195563064-195581099 2 517 17516 intergenic 4.46 0 0,0,1 0 0,0,0 0 0 0 0 0.455069650605161 0 0 17.1516327928751 0 0 0 cat,chimp,dog,horse,human,macaque,marmoset,orangutan,pig, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0.0043535,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0.004474,MCF7@0,NHEK@0,NHLF@0.050718,SKNSHRA@0, 0 0 0 0 ENSG00000223783.1 ENST00000413586.1 chr3:195563205-195563916 2 572 137 intergenic 5.42 0 0,0,1 0 0,0,0 0 0 0 0 0 0 0 0 0 0 0 cat,chimp,horse,human,macaque,marmoset, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0.0043535,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0.004474,MCF7@0,NHEK@0,NHLF@0.050718,SKNSHRA@0, 0 0 0 0 ENSG00000223783.1 ENST00000429834.1 chr3:195563211-195587275 2 406 23656 intergenic 7.59 0 0,1,1 0 0,0,0 0 0 0 0 0.502832262428137 0 9.13793103448276 12.8667568481569 55.032 0 0 horse,human,macaque, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0.0043535,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0.004474,MCF7@0,NHEK@0,NHLF@0.050718,SKNSHRA@0, 0 0 0 0 ENSG00000224614.1 ENST00000458180.1 chr3:195634947-195638128 2 2094 1085 exonic 4.90 0 0,0,0 0 0,0,0 5.71155682903534 0 7.17 10.5138490926457 222.752995391705 41.164 13.1609360076409 248.495852534562 46.292 0 0 chimp,elephant,human,macaque,marmoset,orangutan,panda,pig, lincRNA processed_transcript A549@0,AG04450@0.0056495,BJ@0.0130035,GM12878@0.210702,H1HESC@0.0435705,HELAS3@0.026439,HEPG2@0.01765,HMEC@0.042978,HSMM@0.29419,HUVEC@0.01612,K562@0.0439415,MCF7@0.134675,NHEK@0.051739,NHLF@0.0787065,SKNSHRA@0.025323, 0 0 0 0 ENSG00000226155.1 ENST00000448113.1 chr3:195638920-195640857 2 623 1312 intergenic -3.83 0 0,0,0 0 0,0,0 0 0 0 2.78651685393258 0 13.435 7.62118780096308 3.88948170731707 23.024 0 0 chimp,human,macaque,marmoset,orangutan,panda,pig, antisense antisense A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0.0079185,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0.003715,MCF7@0.003217,NHEK@0,NHLF@0,SKNSHRA@0.0080855, 0 0 0 0 ENSG00000226155.1 ENST00000424819.1 chr3:195638965-195640135 2 202 966 intergenic 0 0 0,0,1 0 0,0,0 0 0 0 8.59405940594059 0 13.435 23.5049504950495 5.28260869565217 23.024 0 0 cat,human,macaque,orangutan, antisense antisense A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0.0079185,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0.003715,MCF7@0.003217,NHEK@0,NHLF@0,SKNSHRA@0.0080855, 0 0 0 0 ENSG00000224652.1 ENST00000457079.1 chr3:195869507-195887761 3 1825 16425 intergenic 5.17 0 0,1,1 0 0,0,0 0 0 25.792 11.0131506849315 0.912937595129376 26.027 12.6005479452055 14.2939421613394 28.199 0 0 cat,chimp,cow,horse,human,orangutan,pig, lincRNA processed_transcript A549@0,AG04450@0,BJ@0,GM12878@0.006105,H1HESC@0.003184,HELAS3@0.24657,HEPG2@0.031336,HMEC@0.355351,HSMM@0.0094905,HUVEC@0,K562@0.794635,MCF7@0.908942,NHEK@0.0991977,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000228028.1 ENST00000425275.1 chr3:195977420-195978525 2 420 683 intronic -2.61 0 0,0,0 0 0,0,0 0 0 0 0 0 2.151 181 198.358711566618 281.823 0 0 chimp,cow,elephant,human,macaque,orangutan,panda,pig, antisense antisense A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000235897.1 ENST00000420226.1 chr3:196045201-196050544 2 320 5021 exonic -9.77 1 1,1,1 0 0,0,0 0 0 0 0 1.09998008364868 24.844 0 3.41226847241585 25.576 0 0 human,marmoset,orangutan, antisense antisense A549@0.237951,AG04450@0.094342,BJ@0.122931,GM12878@0.130469,H1HESC@0.219805,HELAS3@0.437907,HEPG2@0.128279,HMEC@0.06583,HSMM@0.014293,HUVEC@0.115493,K562@0.172399,MCF7@0.603109,NHEK@0.056055,NHLF@0.115404,SKNSHRA@0.478745, 0 0 0 0 ENSG00000235897.1 ENST00000452051.1 chr3:196045221-196052441 2 1827 5391 exonic 2.57 0 1,1,1 0 0,0,0 24.1297208538588 0.151363383416806 0 62.5385878489327 1.59840474865517 24.844 63.1423097974822 4.2943795214246 25.576 0 0 human, antisense antisense A549@0.237951,AG04450@0.094342,BJ@0.122931,GM12878@0.130469,H1HESC@0.219805,HELAS3@0.437907,HEPG2@0.128279,HMEC@0.06583,HSMM@0.014293,HUVEC@0.115493,K562@0.172399,MCF7@0.603109,NHEK@0.056055,NHLF@0.115404,SKNSHRA@0.478745, 0 0 0 0 ENSG00000235897.1 ENST00000444939.1 chr3:196045277-196051059 2 462 5318 exonic 2.57 0 1,1,1 0 0,0,0 68.2943722943723 0 0 115.84632034632 1.03854832643851 24.844 122.792207792208 3.22169988717563 25.576 0 0 cat,chimp,cow,dog,elephant,horse,human,macaque,marmoset,mouse,orangutan,panda,rabbit, antisense antisense A549@0.237951,AG04450@0.094342,BJ@0.122931,GM12878@0.130469,H1HESC@0.219805,HELAS3@0.437907,HEPG2@0.128279,HMEC@0.06583,HSMM@0.014293,HUVEC@0.115493,K562@0.172399,MCF7@0.603109,NHEK@0.056055,NHLF@0.115404,SKNSHRA@0.478745, 0 0 0 0 ENSG00000225822.2 ENST00000442941.1 chr3:196158256-196159401 2 384 759 exonic 1.36 0 0,1,1 0 0,0,0 175.3203125 92.6969696969697 70.179 381.265625 168.592885375494 97.811 400.661458333333 493.720685111989 95.634 0 0 cat,chimp,cow,dog,elephant,horse,human,marmoset,mouse,opossum,orangutan,rabbit,rat, antisense antisense A549@0.0056235,AG04450@0.020556,BJ@0.0604915,GM12878@0,H1HESC@0.018196,HELAS3@0.093299,HEPG2@0.0870585,HMEC@0,HSMM@0.0306215,HUVEC@0.020308,K562@0,MCF7@0.0142985,NHEK@0,NHLF@0.0527845,SKNSHRA@0.082335, 0 0 0 0 ENSG00000232065.1 ENST00000441644.1 chr3:196358369-196359458 2 346 741 intergenic -4.14 0 1,1,1 0 0,0,0 0 0 0 68.9219653179191 44.7368421052632 1.434 72.0549132947977 45.0877192982456 2.916 0 0 chimp,horse,human,macaque,marmoset, antisense antisense A549@0.098247,AG04450@0.038834,BJ@0.0352525,GM12878@0.278374,H1HESC@0.178259,HELAS3@0.43365,HEPG2@0.0857395,HMEC@0.058831,HSMM@0.0386645,HUVEC@0.120378,K562@0.428154,MCF7@0.0585585,NHEK@0.0489337,NHLF@0.044481,SKNSHRA@0.176156, 0 0 0 0 ENSG00000230732.1 ENST00000432047.1 chr3:196640757-196641313 1 556 0 intronic -6.82 0 0,0,0 0 0,0,0 0 0 0 0 0 0 0 0 0 0 0 chimp,human,macaque,orangutan, antisense antisense A549@0.0515775,AG04450@0.087409,BJ@0.0351125,GM12878@0.237851,H1HESC@0.109863,HELAS3@0.323796,HEPG2@0.072094,HMEC@0.014138,HSMM@0.032102,HUVEC@0.073164,K562@0.380323,MCF7@0.300643,NHEK@0.118432,NHLF@0.0211155,SKNSHRA@0.150862, 0 0 0 0 ENSG00000225578.1 ENST00000447775.1 chr3:196666748-196669405 3 559 2094 exonic -4.51 0 0,0,1 0 0,0,0 89.5599284436494 6.19054441260745 98.787 85.6529516994633 0.684813753581662 112.523 84.3756708407871 1.64756446991404 116.084 0 0 cat,chimp,human,macaque,marmoset,orangutan, antisense antisense A549@0.082014,AG04450@0.055966,BJ@0.066616,GM12878@0.150285,H1HESC@0.055138,HELAS3@0.078437,HEPG2@0.156755,HMEC@0,HSMM@0.027603,HUVEC@0.050992,K562@0.0529955,MCF7@0.078573,NHEK@0.0327687,NHLF@0.0103385,SKNSHRA@0.0993865, 0 0 0 0 ENSG00000228109.1 ENST00000424769.1 chr3:196726331-196731607 2 354 4920 intronic 0 1 0,0,1 0 0,0,0 0 27.7298780487805 11.04 0 22.7363821138211 0 0 24.9936991869919 0 0 0 human,marmoset, antisense antisense A549@0.23215,AG04450@0.246437,BJ@0.33093,GM12878@0.0988585,H1HESC@0.4043,HELAS3@0.648799,HEPG2@0.516134,HMEC@0.163018,HSMM@0.064238,HUVEC@0.436604,K562@0.667418,MCF7@0.523072,NHEK@0.175547,NHLF@0.0860155,SKNSHRA@0.890867, 0 0 0 0 ENSG00000228109.1 ENST00000415244.1 chr3:196729777-196731615 4 947 885 exonic 2.30 1 1,1,1 1 0,0,0 45.649419218585 55.5084745762712 43.29 26.4276663146779 52.2282485875706 33.375 31.5058078141499 56.1887005649718 35.745 0 0 chimp,dog,human,macaque,marmoset,orangutan, antisense antisense A549@0.23215,AG04450@0.246437,BJ@0.33093,GM12878@0.0988585,H1HESC@0.4043,HELAS3@0.648799,HEPG2@0.516134,HMEC@0.163018,HSMM@0.064238,HUVEC@0.436604,K562@0.667418,MCF7@0.523072,NHEK@0.175547,NHLF@0.0860155,SKNSHRA@0.890867, 0 0 0 0 ENSG00000228109.1 ENST00000446695.1 chr3:196730003-196730601 2 202 394 exonic 2.30 0 0,1,1 1 0,0,0 0 0 43.29 0 9.5253807106599 33.375 0 14.6725888324873 35.745 0 0 human,macaque,orangutan, antisense antisense A549@0.23215,AG04450@0.246437,BJ@0.33093,GM12878@0.0988585,H1HESC@0.4043,HELAS3@0.648799,HEPG2@0.516134,HMEC@0.163018,HSMM@0.064238,HUVEC@0.436604,K562@0.667418,MCF7@0.523072,NHEK@0.175547,NHLF@0.0860155,SKNSHRA@0.890867, 0 0 0 0 ENSG00000228109.1 ENST00000437064.1 chr3:196730508-196731609 2 304 795 intronic 0 1 1,1,1 0 0,0,0 0 117.158490566038 0 0 85.5006289308176 3.753 0 93.7044025157233 5.781 0 0 chimp,horse,human,macaque,marmoset,orangutan, antisense antisense A549@0.23215,AG04450@0.246437,BJ@0.33093,GM12878@0.0988585,H1HESC@0.4043,HELAS3@0.648799,HEPG2@0.516134,HMEC@0.163018,HSMM@0.064238,HUVEC@0.436604,K562@0.667418,MCF7@0.523072,NHEK@0.175547,NHLF@0.0860155,SKNSHRA@0.890867, 0 0 0 0 ENSG00000228109.1 ENST00000414354.1 chr3:196730621-196731611 2 466 522 exonic 0 1 1,1,1 0 0,0,0 61.5643776824034 122.718390804598 0 44.4935622317597 90.4961685823755 3.753 55.2575107296137 92.8850574712644 5.781 0 0 chimp,human,macaque,marmoset,orangutan, antisense antisense A549@0.23215,AG04450@0.246437,BJ@0.33093,GM12878@0.0988585,H1HESC@0.4043,HELAS3@0.648799,HEPG2@0.516134,HMEC@0.163018,HSMM@0.064238,HUVEC@0.436604,K562@0.667418,MCF7@0.523072,NHEK@0.175547,NHLF@0.0860155,SKNSHRA@0.890867, 0 0 0 0 ENSG00000227375.1 ENST00000414529.1 chr3:197025123-197029652 3 496 4029 exonic -5.73 0 0,0,0 0 0,0,0 0 3.25390915860015 133.356 36.4959677419355 3.36336559940432 260.581 39.116935483871 5.13526929759245 265.411 0 0 cat,chimp,cow,elephant,human,macaque,marmoset,orangutan,pig,rabbit, lincRNA processed_transcript A549@0.0165395,AG04450@0.0032935,BJ@0.01042,GM12878@0.018517,H1HESC@0.0470175,HELAS3@0.344035,HEPG2@0.0263485,HMEC@0.132942,HSMM@0.0026915,HUVEC@0.0028705,K562@0.03503,MCF7@0.0516015,NHEK@0.116625,NHLF@0.001139,SKNSHRA@0.0273595, 0 0 0 0 ENSG00000227375.1 ENST00000430666.1 chr3:197025123-197030618 3 1691 3800 exonic -2.64 1 0,0,1 0 0,0,0 0 3.45 133.356 12.3790656416322 2.92342105263158 260.581 15.4346540508575 3.78552631578947 265.411 0 0 cat,chimp,cow,dog,horse,human,macaque,marmoset,orangutan,pig, lincRNA processed_transcript A549@0.0165395,AG04450@0.0032935,BJ@0.01042,GM12878@0.018517,H1HESC@0.0470175,HELAS3@0.344035,HEPG2@0.0263485,HMEC@0.132942,HSMM@0.0026915,HUVEC@0.0028705,K562@0.03503,MCF7@0.0516015,NHEK@0.116625,NHLF@0.001139,SKNSHRA@0.0273595, 0 0 0 0 ENSG00000235126.1 ENST00000438408.1 chr3:197171932-197185194 3 555 12703 intergenic -11.97 0 0,1,0 0 0,0,0 0 0 0 0 4.42501771235141 0 0 7.09328505077541 6.243 0 0 elephant,guinea_pig,horse,human,marmoset,orangutan,pig, lincRNA lincRNA A549@0.005563,AG04450@0,BJ@0.014624,GM12878@0,H1HESC@0,HELAS3@0.0074805,HEPG2@0.0424335,HMEC@0,HSMM@0.0164685,HUVEC@0.0047365,K562@0,MCF7@0,NHEK@0.0461663,NHLF@0,SKNSHRA@0.023082, 0 0 0 0 ENSG00000229912.1 ENST00000445908.1 chr3:197177198-197183525 3 597 5726 intergenic -1.72 0 0,1,0 0 0,0,0 0 0 0 10.9715242881072 2.75585050646175 21.274 11.7755443886097 8.31487949703109 22.511 0 0 cat,chimp,horse,human,macaque,marmoset,orangutan, lincRNA lincRNA A549@0.0036175,AG04450@0,BJ@0.0120995,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0.017218,HMEC@0.006824,HSMM@0.013969,HUVEC@0.0044965,K562@0,MCF7@0.0236075,NHEK@0.0576247,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000237167.1 ENST00000420213.1 chr3:197185276-197193976 2 624 8074 intergenic -5.00 0 0,1,1 0 0,0,0 84.448717948718 7.99777062174882 0 55.1858974358974 21.6435471885063 0 55.8125 27.9562794154075 0 0 0 chimp,elephant,human,macaque,marmoset,orangutan,rabbit, lincRNA lincRNA A549@0,AG04450@0,BJ@0.020767,GM12878@0,H1HESC@0,HELAS3@0.053343,HEPG2@0.092619,HMEC@0.006541,HSMM@0.0770075,HUVEC@0.0328125,K562@0,MCF7@0,NHEK@0.262573,NHLF@0,SKNSHRA@0.0425075, 0 0 0 0 ENSG00000236833.1 ENST00000424493.1 chr3:197387436-197392628 2 1469 3721 intergenic 5.48 0 0,0,0 0 0,0,0 0 0 0 0 0 0 0 0 0 0 0 chimp,human,marmoset,orangutan, lincRNA processed_transcript A549@0.11307,AG04450@0.0078505,BJ@0.0116585,GM12878@0.002741,H1HESC@0.0446775,HELAS3@0.0335255,HEPG2@0.0522995,HMEC@0.019485,HSMM@0,HUVEC@0,K562@0.0219435,MCF7@0.0692625,NHEK@0.00313467,NHLF@0.002653,SKNSHRA@0.062795, 90 2 51 2 ENSG00000234136.1 ENST00000454526.1 chr3:197557556-197558167 2 471 138 exonic 1.89 0 0,0,0 0 0,0,0 76.968152866242 0 34.875 123.872611464968 0 55.836 140.176220806794 0 61.088 0 0 chimp,cow,dog,elephant,guinea_pig,horse,human,macaque,marmoset,orangutan,panda,rabbit, antisense antisense A549@0.0065625,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000232832.1 ENST00000423460.1 chr3:197765192-197766105 3 539 370 exonic -0.06 0 0,0,0 0 0,0,0 57.6994434137291 13.4486486486486 0 102.311688311688 12.0648648648649 8.156 124.682745825603 378.151351351351 12.444 0 0 cat,chimp,cow,dog,elephant,guinea_pig,human,macaque,marmoset,orangutan,panda, antisense antisense A549@0,AG04450@0,BJ@0.0238825,GM12878@0.017299,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0.1963,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000250312.2 ENST00000511079.1 chr4:124386-156177 3 2546 29241 intergenic 0.43 0 1,1,1 1 0,0,1 0 0 0 0 0 0 91.2262372348783 6.58954892103553 0 0 0 chimp,guinea_pig,human,macaque,marmoset,mouse,orangutan, lincRNA lincRNA A549@0.74103,AG04450@0.856947,BJ@0.95532,GM12878@2.53673,H1HESC@4.82376,HELAS3@0.881374,HEPG2@0.10682,HMEC@0.940795,HSMM@0.945365,HUVEC@1.34563,K562@1.77535,MCF7@2.96546,NHEK@1.67005,NHLF@1.0327,SKNSHRA@0.214053, 0 0 0 0 ENSG00000250312.2 ENST00000513304.1 chr4:124404-127532 2 1574 1552 intergenic 0.43 0 1,1,1 1 0,0,0 0 0 0 0 0 0 0 0 0 0 1 chimp,human,macaque,orangutan, lincRNA lincRNA A549@0.74103,AG04450@0.856947,BJ@0.95532,GM12878@2.53673,H1HESC@4.82376,HELAS3@0.881374,HEPG2@0.10682,HMEC@0.940795,HSMM@0.945365,HUVEC@1.34563,K562@1.77535,MCF7@2.96546,NHEK@1.67005,NHLF@1.0327,SKNSHRA@0.214053, 0 0 0 0 ENSG00000250312.2 ENST00000513889.1 chr4:124420-125178 1 758 0 intergenic 0.43 0 0,1,0 1 0,0,0 0 0 0 0 0 0 0 0 0 1 1 chimp,human,macaque,marmoset,orangutan, lincRNA lincRNA A549@0.74103,AG04450@0.856947,BJ@0.95532,GM12878@2.53673,H1HESC@4.82376,HELAS3@0.881374,HEPG2@0.10682,HMEC@0.940795,HSMM@0.945365,HUVEC@1.34563,K562@1.77535,MCF7@2.96546,NHEK@1.67005,NHLF@1.0327,SKNSHRA@0.214053, 0 0 0 0 ENSG00000250312.2 ENST00000510175.1 chr4:124420-157779 2 3212 30145 intergenic -0.06 1 0,1,0 1 0,0,1 0 0 0 0 0 0 132.290161892902 6.39193896168519 0 0 0 cat,chimp,cow,dog,elephant,guinea_pig,horse,human,macaque,marmoset,mouse,opossum,orangutan,panda,pig,rabbit,rat, lincRNA lincRNA A549@0.74103,AG04450@0.856947,BJ@0.95532,GM12878@2.53673,H1HESC@4.82376,HELAS3@0.881374,HEPG2@0.10682,HMEC@0.940795,HSMM@0.945365,HUVEC@1.34563,K562@1.77535,MCF7@2.96546,NHEK@1.67005,NHLF@1.0327,SKNSHRA@0.214053, 0 0 0 0 ENSG00000250312.2 ENST00000502662.1 chr4:154702-156491 1 1789 0 intergenic -0.06 0 0,1,0 0 0,0,1 0 0 0 0 0 0 138.248742314142 0 0 0 0 cat,chimp,cow,dog,elephant,guinea_pig,horse,human,macaque,marmoset,mouse,opossum,orangutan,panda,pig,platypus,rabbit,rat, lincRNA lincRNA A549@0.74103,AG04450@0.856947,BJ@0.95532,GM12878@2.53673,H1HESC@4.82376,HELAS3@0.881374,HEPG2@0.10682,HMEC@0.940795,HSMM@0.945365,HUVEC@1.34563,K562@1.77535,MCF7@2.96546,NHEK@1.67005,NHLF@1.0327,SKNSHRA@0.214053, 0 0 0 0 ENSG00000250312.2 ENST00000400172.3 chr4:154872-156324 1 1452 0 intergenic -0.06 0 0,0,0 0 0,0,1 0 0 0 0 0 0 167.825068870523 0 1.701 0 0 cat,chimp,cow,dog,elephant,guinea_pig,horse,human,macaque,marmoset,mouse,opossum,orangutan,panda,pig,platypus,rabbit,rat, lincRNA lincRNA A549@0.74103,AG04450@0.856947,BJ@0.95532,GM12878@2.53673,H1HESC@4.82376,HELAS3@0.881374,HEPG2@0.10682,HMEC@0.940795,HSMM@0.945365,HUVEC@1.34563,K562@1.77535,MCF7@2.96546,NHEK@1.67005,NHLF@1.0327,SKNSHRA@0.214053, 0 0 0 0 ENSG00000256961.1 ENST00000542026.1 chr4:570957-578655 3 1851 5843 intergenic 6.52 0 0,0,0 0 0,0,0 2.02052944354403 0.564778367277084 0 20.8995137763371 0.801814136573678 159.012 29.6185845488925 0.876775628957727 169.724 0 1 chimp,human,marmoset,orangutan, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0.013633,H1HESC@0.120131,HELAS3@0,HEPG2@0.049018,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0.0108935,NHEK@0.00284833,NHLF@0,SKNSHRA@0.0186055, 0 0 0 0 ENSG00000242686.1 ENST00000468356.1 chr4:647012-649434 4 1384 1032 exonic 7.64 0 0,0,0 0 0,0,0 39.014450867052 8.95348837209302 31.034 58.5592485549133 42.734496124031 43.173 66.3728323699422 46.3100775193798 57.354 0 0 chimp,dog,guinea_pig,human,macaque,marmoset,panda, antisense antisense A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0.452545,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0.004288,K562@0,MCF7@0.104838,NHEK@0,NHLF@0,SKNSHRA@0.337074, 0 0 0 0 ENSG00000242686.1 ENST00000489312.1 chr4:647523-649266 2 632 1109 exonic 5.20 0 0,0,1 0 0,0,0 53.5696202531646 26.4923354373309 31.034 72.1772151898734 71.7150586113616 43.173 90.3180379746835 74.4553651938683 57.354 0 0 cat,chimp,cow,dog,elephant,guinea_pig,horse,human,marmoset,orangutan,panda,pig,rabbit, antisense antisense A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0.452545,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0.004288,K562@0,MCF7@0.104838,NHEK@0,NHLF@0,SKNSHRA@0.337074, 0 0 0 0 ENSG00000248416.1 ENST00000502923.1 chr4:716064-717823 2 567 1190 intronic 3.31 0 0,0,1 0 0,0,0 0 0 0 0 0 0 5.27689594356261 158.312605042017 0 1 1 chimp,human,macaque,marmoset,orangutan, antisense antisense A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0.004794,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000233799.1 ENST00000454037.1 chr4:758275-758862 2 284 301 exonic 0 0 0,0,1 0 0,0,0 103.176056338028 0 8.48 128.306338028169 0 21.575 141.352112676056 0 26.12 0 0 chimp,cow,dog,horse,human,macaque,marmoset,mouse,orangutan,panda, antisense antisense A549@0.013264,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0.027008,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0.0381695,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000250259.1 ENST00000503095.1 chr4:1021466-1022760 2 270 1022 intergenic 0 0 0,0,0 0 0,0,0 0 0 15.765 0 2.1839530332681 38.304 0 3.02348336594912 36.777 1 1 chimp,human,macaque,marmoset,orangutan, lincRNA lincRNA A549@0.0193925,AG04450@0,BJ@0,GM12878@0,H1HESC@0.021399,HELAS3@0.023653,HEPG2@0.223973,HMEC@0,HSMM@0,HUVEC@0.0899455,K562@0.029707,MCF7@0.026404,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000251652.1 ENST00000504969.1 chr4:1107427-1126738 3 465 18842 intergenic 0 1 0,0,0 0 0,0,0 0 14.1415985564165 8.97 0 12.1818809043626 33.409 0 14.2814987793228 41.049 1 1 chimp,human,macaque,marmoset,orangutan, antisense antisense A549@0.083939,AG04450@0.0147445,BJ@0.0792215,GM12878@0,H1HESC@0,HELAS3@0.110148,HEPG2@0.157321,HMEC@0,HSMM@0,HUVEC@0.012718,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0.0724895, 0 0 0 0 ENSG00000251652.1 ENST00000510332.1 chr4:1126097-1126765 2 381 285 intergenic 0 1 0,1,0 0 0,0,0 0 0 0 0 0 0 0 0 0 1 1 chimp,human,macaque,marmoset,orangutan, antisense antisense A549@0.083939,AG04450@0.0147445,BJ@0.0792215,GM12878@0,H1HESC@0,HELAS3@0.110148,HEPG2@0.157321,HMEC@0,HSMM@0,HUVEC@0.012718,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0.0724895, 0 0 0 0 ENSG00000227189.2 ENST00000417557.1 chr4:1145160-1147489 2 2163 164 intergenic 8.85 0 0,1,0 0 0,0,0 10.7813222376329 0 0 8.04808136846972 0 0 11.0249653259362 0 0 0 0 chimp,human,macaque,marmoset, antisense antisense A549@0.194264,AG04450@0.105484,BJ@0.185402,GM12878@0,H1HESC@0.277751,HELAS3@0.624711,HEPG2@0.406956,HMEC@0.003783,HSMM@0,HUVEC@0.48202,K562@0,MCF7@0.0018995,NHEK@0.0488587,NHLF@0.0053475,SKNSHRA@0.396147, 0 0 0 0 ENSG00000246629.1 ENST00000500004.1 chr4:1203908-1212363 6 3864 4581 exonic 9.34 0 0,1,0 0 0,0,0 1.16666666666667 50.0694171578258 0 31.8674948240166 68.0901549879939 0 57.9642857142857 99.6574983628029 0 0 0 chimp,cow,human,macaque,marmoset,orangutan, lincRNA lincRNA A549@0.000561,AG04450@0.0431505,BJ@0.0053705,GM12878@0.0150955,H1HESC@0.002056,HELAS3@0.001208,HEPG2@0.0034855,HMEC@0,HSMM@0.0017095,HUVEC@0.000769,K562@0,MCF7@0.0005315,NHEK@0.00033,NHLF@0.005038,SKNSHRA@0.0011745, 0 0 0 0 ENSG00000249548.1 ENST00000505364.1 chr4:1246779-1259951 2 2421 10749 intergenic 6.41 0 0,0,0 0 0,0,0 0 0 0 0 0 0 0 0 0 0 0 human, antisense antisense A549@0.230253,AG04450@0.281321,BJ@0.208328,GM12878@0.284909,H1HESC@0.323502,HELAS3@0.277547,HEPG2@0.306531,HMEC@0.419912,HSMM@0.20292,HUVEC@0.169399,K562@0.296096,MCF7@0.53172,NHEK@0.054099,NHLF@0.17044,SKNSHRA@0.34752, 0 0 0 0 ENSG00000254094.1 ENST00000504748.1 chr4:1350369-1351863 2 525 967 intronic 13.16 0 0,0,0 0 0,0,0 0 0 0 0 0 5.104 0 0 5.072 1 1 chimp,human,macaque,marmoset,orangutan, sense_intronic sense_intronic A549@0.0316475,AG04450@0.006963,BJ@0.02044,GM12878@0.003941,H1HESC@0.0974405,HELAS3@0.0234195,HEPG2@0.043145,HMEC@0,HSMM@0,HUVEC@0.013211,K562@0.000812,MCF7@0.0115875,NHEK@0.021396,NHLF@0,SKNSHRA@0.0405745, 0 0 0 0 ENSG00000253399.1 ENST00000515842.1 chr4:1352267-1353249 2 439 541 intronic 4.20 1 0,1,0 0 0,0,0 0 0 0 17.2756264236902 26.9334565619224 0 26.1138952164009 43.5914972273568 0 0 0 chimp,cow,dog,elephant,horse,human,macaque,marmoset,mouse,orangutan,panda,rat, sense_intronic sense_intronic A549@0.0322725,AG04450@0.0320445,BJ@0.051321,GM12878@0.083292,H1HESC@0.0848715,HELAS3@0.0125505,HEPG2@0,HMEC@0,HSMM@0.03555,HUVEC@0.0213715,K562@0.0171375,MCF7@0,NHEK@0.031471,NHLF@0.0046425,SKNSHRA@0.043137, 0 0 0 0 ENSG00000244459.2 ENST00000466692.1 chr4:1575789-1581980 2 577 5612 intergenic 3.65 1 1,1,1 0 0,1,0 67.3483535528596 104.510869565217 0 80.5857885615251 114.681397006415 0 77.7972270363951 158.910548823949 0 0 0 chimp,horse,human,macaque,marmoset,orangutan, lincRNA lincRNA A549@0.323196,AG04450@0.086735,BJ@1.07451,GM12878@0.081484,H1HESC@0.193267,HELAS3@0.083353,HEPG2@0.0073595,HMEC@0.091935,HSMM@0.092956,HUVEC@0.339105,K562@0.099954,MCF7@0.395918,NHEK@0.724276,NHLF@0.197105,SKNSHRA@0.27542, 0 0 0 0 ENSG00000250623.1 ENST00000502636.1 chr4:2141400-2142785 2 579 804 intronic -5.68 0 0,0,0 0 0,0,0 0 0 0 0 0 0 0 0 0 0 0 chimp,dog,guinea_pig,horse,human,macaque,marmoset,orangutan, antisense antisense A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0.105672,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000251148.1 ENST00000510632.1 chr4:2297311-2320816 3 560 22941 intronic -5.63 0 0,0,0 0 0,0,0 0 0.65167167952574 0 0 6.8128242012118 0 0 19.1496011507781 0 0 0 chimp,horse,human,macaque,marmoset,orangutan,panda, antisense antisense A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000206113.2 ENST00000382849.2 chr4:2420701-2430972 3 2787 7480 intergenic 18.83 0 0,1,1 0 0,1,1 0 0 12.54 3.48116254036598 0.154545454545455 50.763 15.1417294581988 0.192914438502674 53.046 0 1 chimp,human,macaque, antisense antisense A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0.0131935,HEPG2@0.0281515,HMEC@0,HSMM@0,HUVEC@0.0034385,K562@0.0007255,MCF7@0.0073995,NHEK@0,NHLF@0.016111,SKNSHRA@0.0280865, 0 0 0 0 ENSG00000248399.1 ENST00000502641.1 chr4:2465524-2465851 2 218 107 intronic -0.20 0 0,1,1 0 0,0,0 0 0 0 0 0 29.668 0 0 31.533 1 1 chimp,human,macaque,marmoset,orangutan, sense_intronic sense_intronic A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000249673.1 ENST00000505731.1 chr4:2936626-2949400 5 1994 10772 exonic 11.31 0 1,1,1 1 0,0,0 0 11.2655959896027 0 9.23219658976931 18.9164500557 0.828 16.0852557673019 29.7605829929447 2.167 1 1 chimp,human,macaque,marmoset,orangutan, lincRNA processed_transcript A549@1.81167,AG04450@2.92007,BJ@4.68468,GM12878@2.22966,H1HESC@4.14112,HELAS3@2.27834,HEPG2@2.06515,HMEC@6.95152,HSMM@3.19643,HUVEC@1.6159,K562@1.52921,MCF7@4.56245,NHEK@9.65607,NHLF@3.25245,SKNSHRA@8.82905, 0 0 0 0 ENSG00000249673.1 ENST00000507999.1 chr4:2936667-2942231 5 1355 4201 exonic 11.31 1 1,1,1 1 0,0,0 0 19.8495596286598 0 0 19.4558438467032 0 0 29.9221613901452 0 0 1 chimp,human,macaque,orangutan, lincRNA processed_transcript A549@1.81167,AG04450@2.92007,BJ@4.68468,GM12878@2.22966,H1HESC@4.14112,HELAS3@2.27834,HEPG2@2.06515,HMEC@6.95152,HSMM@3.19643,HUVEC@1.6159,K562@1.52921,MCF7@4.56245,NHEK@9.65607,NHLF@3.25245,SKNSHRA@8.82905, 0 0 0 0 ENSG00000249673.1 ENST00000512712.1 chr4:2937273-2943596 3 3003 3316 exonic 8.18 0 0,0,0 0 0,0,0 0 25.1471652593486 0 5.89443889443889 24.6483715319662 0 8.57409257409257 37.9080217129071 0 0 1 chimp,human,macaque,orangutan, lincRNA processed_transcript A549@1.81167,AG04450@2.92007,BJ@4.68468,GM12878@2.22966,H1HESC@4.14112,HELAS3@2.27834,HEPG2@2.06515,HMEC@6.95152,HSMM@3.19643,HUVEC@1.6159,K562@1.52921,MCF7@4.56245,NHEK@9.65607,NHLF@3.25245,SKNSHRA@8.82905, 0 0 0 0 ENSG00000249673.1 ENST00000515194.1 chr4:2937273-2952794 4 3856 11659 exonic 7.39 0 0,0,0 0 0,0,0 0 11.7911484689939 0 1.38485477178423 21.470537781971 0 1.59258298755187 34.7834291105584 0 0 1 chimp,human,marmoset, lincRNA processed_transcript A549@1.81167,AG04450@2.92007,BJ@4.68468,GM12878@2.22966,H1HESC@4.14112,HELAS3@2.27834,HEPG2@2.06515,HMEC@6.95152,HSMM@3.19643,HUVEC@1.6159,K562@1.52921,MCF7@4.56245,NHEK@9.65607,NHLF@3.25245,SKNSHRA@8.82905, 0 0 0 0 ENSG00000249673.1 ENST00000503709.1 chr4:2938993-2963465 4 1612 22854 exonic 7.39 0 0,0,0 0 0,0,0 0 9.3985297978472 0 3.31265508684864 18.2304629386541 0 3.80955334987593 51.2980659840728 0 0 1 chimp,human,marmoset,orangutan, lincRNA processed_transcript A549@1.81167,AG04450@2.92007,BJ@4.68468,GM12878@2.22966,H1HESC@4.14112,HELAS3@2.27834,HEPG2@2.06515,HMEC@6.95152,HSMM@3.19643,HUVEC@1.6159,K562@1.52921,MCF7@4.56245,NHEK@9.65607,NHLF@3.25245,SKNSHRA@8.82905, 0 0 0 0 ENSG00000249673.1 ENST00000507702.1 chr4:2939322-2948655 2 304 9027 intronic 0 0 0,1,0 1 0,0,0 0 13.4433366566966 0 0 22.5731693807466 0 0 35.5135703999114 0 0 1 chimp,human,marmoset,orangutan, lincRNA processed_transcript A549@1.81167,AG04450@2.92007,BJ@4.68468,GM12878@2.22966,H1HESC@4.14112,HELAS3@2.27834,HEPG2@2.06515,HMEC@6.95152,HSMM@3.19643,HUVEC@1.6159,K562@1.52921,MCF7@4.56245,NHEK@9.65607,NHLF@3.25245,SKNSHRA@8.82905, 0 0 0 0 ENSG00000249673.1 ENST00000512802.1 chr4:2939378-2942168 2 332 2456 intronic 7.86 1 0,1,1 1 0,0,0 0 33.9527687296417 0 0 33.2793159609121 0 0 51.182003257329 0 0 1 chimp,human,marmoset,orangutan, lincRNA processed_transcript A549@1.81167,AG04450@2.92007,BJ@4.68468,GM12878@2.22966,H1HESC@4.14112,HELAS3@2.27834,HEPG2@2.06515,HMEC@6.95152,HSMM@3.19643,HUVEC@1.6159,K562@1.52921,MCF7@4.56245,NHEK@9.65607,NHLF@3.25245,SKNSHRA@8.82905, 0 0 0 0 ENSG00000251075.1 ENST00000503893.1 chr4:3065198-3076241 3 512 10527 intergenic 1.12 0 0,1,1 0 0,0,0 0 0 28.421 0 4.94556853804503 97.505 0 5.2045217060891 108.534 0 1 chimp,human,macaque,orangutan, antisense antisense A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0.023082,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0.013279,HUVEC@0,K562@0.0045085,MCF7@0.170682,NHEK@0,NHLF@0.0037885,SKNSHRA@0.008811, 0 0 0 0 ENSG00000250681.1 ENST00000505702.1 chr4:3634756-3635702 2 464 480 intergenic 3.80 0 0,0,0 0 0,0,0 0 0 0 0 0 0 0 0 0 0 1 chimp,human,macaque,orangutan, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0.0393785, 0 0 0 0 ENSG00000250632.1 ENST00000508619.1 chr4:3675320-3679582 3 1030 3228 intergenic 4.72 0 0,0,0 0 0,0,0 0 0 0 0 0 0 0 0 0 0 1 human,macaque,orangutan, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000250986.1 ENST00000511928.1 chr4:3760475-3765117 2 4523 117 intergenic 6.98 0 0,0,1 0 0,0,0 5.85253150563785 0 0 2.36900287419854 0 0 3.32522661950033 0 0 0 0 chimp,human,macaque,marmoset,orangutan,panda, lincRNA processed_transcript A549@0.233478,AG04450@0.0039255,BJ@0.0272295,GM12878@0,H1HESC@3.67108,HELAS3@0.48152,HEPG2@1.26286,HMEC@0.004117,HSMM@0.712079,HUVEC@0,K562@0.002171,MCF7@0.85863,NHEK@0.00707,NHLF@0.018808,SKNSHRA@0.240764, 0 0 0 0 ENSG00000248614.1 ENST00000503960.1 chr4:4034897-4076780 5 1212 40663 intergenic 3.28 0 0,0,0 0 0,0,0 0 0 0 0 2.48840469222635 0 0 5.34532621793768 0 0 1 chimp,human, lincRNA lincRNA A549@0.0147545,AG04450@0.0320565,BJ@0.013919,GM12878@0.0178985,H1HESC@0.0190795,HELAS3@0.0018565,HEPG2@0.0229445,HMEC@0,HSMM@0.020767,HUVEC@0.0044435,K562@0.215844,MCF7@0.00841,NHEK@0.004229,NHLF@0.011152,SKNSHRA@0.0317285, 0 0 0 0 ENSG00000248516.1 ENST00000509015.1 chr4:4323689-4335909 3 1413 10803 intergenic 0.37 0 0,0,0 0 0,0,0 0 0 60.666 0 0.199111357956123 75.899 0 0.22493751735629 91.349 0 1 chimp,human,marmoset, lincRNA lincRNA A549@0.014101,AG04450@0.034018,BJ@0.02705,GM12878@0.095096,H1HESC@0.0709645,HELAS3@0.035571,HEPG2@0.022742,HMEC@0.008675,HSMM@0.0046725,HUVEC@0.0188795,K562@0.0407075,MCF7@0.0772425,NHEK@0.051172,NHLF@0,SKNSHRA@0.138294, 0 0 0 0 ENSG00000248221.1 ENST00000515487.1 chr4:4477848-4483427 4 538 5035 intronic 2.97 0 0,0,0 0 0,0,0 0 40.8285998013903 0 16.3159851301115 26.7495531281033 0 16.907063197026 29.4353525322741 4.617 0 0 chimp,cow,human,macaque,marmoset,orangutan,rabbit, sense_intronic sense_intronic A549@0.010191,AG04450@0.037726,BJ@0.054697,GM12878@0.02893,H1HESC@0.00596,HELAS3@0.061559,HEPG2@0.06707,HMEC@0,HSMM@0,HUVEC@0.026053,K562@0.070274,MCF7@0.0427225,NHEK@0,NHLF@0,SKNSHRA@0.114996, 0 0 0 0 ENSG00000247708.2 ENST00000499430.2 chr4:4543858-4546634 2 663 2111 exonic -9.47 0 0,1,0 1 0,0,0 0 11.4675509237328 92.516 4.38461538461539 10.6115585030791 119.731 4.07239819004525 11.9682614874467 121.065 0 0 cat,chimp,cow,human,macaque,marmoset,orangutan, lincRNA processed_transcript A549@0.879355,AG04450@0.863532,BJ@0.862818,GM12878@2.07417,H1HESC@3.6492,HELAS3@2.13206,HEPG2@1.68461,HMEC@0.557503,HSMM@0.326821,HUVEC@1.10991,K562@1.23996,MCF7@0.328315,NHEK@0.590928,NHLF@0.837986,SKNSHRA@1.97765, 0 0 0 0 ENSG00000247708.2 ENST00000507244.1 chr4:4543870-4562286 3 666 17746 exonic -6.50 0 0,1,0 1 0,0,0 0 20.4974642172884 92.516 165.474474474474 20.0431083060971 122.315 153.926426426426 21.4926744054998 123.465 1 1 chimp,human,macaque,marmoset,orangutan, lincRNA processed_transcript A549@0.879355,AG04450@0.863532,BJ@0.862818,GM12878@2.07417,H1HESC@3.6492,HELAS3@2.13206,HEPG2@1.68461,HMEC@0.557503,HSMM@0.326821,HUVEC@1.10991,K562@1.23996,MCF7@0.328315,NHEK@0.590928,NHLF@0.837986,SKNSHRA@1.97765, 0 0 0 0 ENSG00000247708.2 ENST00000512438.1 chr4:4543926-4592902 3 546 48426 exonic -0.49 0 0,1,0 1 0,0,0 0 10.104571924173 92.516 0 11.5936067401809 120.654 0 12.7597984553752 121.693 1 1 chimp,human,macaque,marmoset,orangutan, lincRNA processed_transcript A549@0.879355,AG04450@0.863532,BJ@0.862818,GM12878@2.07417,H1HESC@3.6492,HELAS3@2.13206,HEPG2@1.68461,HMEC@0.557503,HSMM@0.326821,HUVEC@1.10991,K562@1.23996,MCF7@0.328315,NHEK@0.590928,NHLF@0.837986,SKNSHRA@1.97765, 0 0 0 0 ENSG00000247708.2 ENST00000502693.1 chr4:4543967-4639631 3 721 94939 exonic 2.78 0 0,1,0 1 0,0,0 0 8.29237721062998 92.516 0 11.1829069191797 120.654 0 12.1797153962018 121.693 0 0 chimp,horse,human,macaque,marmoset,orangutan,panda, lincRNA processed_transcript A549@0.879355,AG04450@0.863532,BJ@0.862818,GM12878@2.07417,H1HESC@3.6492,HELAS3@2.13206,HEPG2@1.68461,HMEC@0.557503,HSMM@0.326821,HUVEC@1.10991,K562@1.23996,MCF7@0.328315,NHEK@0.590928,NHLF@0.837986,SKNSHRA@1.97765, 0 0 0 0 ENSG00000247708.2 ENST00000514763.1 chr4:4544145-4546787 2 529 2111 intergenic -9.47 0 0,1,1 1 0,0,0 0 11.4675509237328 92.516 0 10.6115585030791 120.654 0 11.9682614874467 121.693 1 1 chimp,human,macaque,marmoset,orangutan, lincRNA processed_transcript A549@0.879355,AG04450@0.863532,BJ@0.862818,GM12878@2.07417,H1HESC@3.6492,HELAS3@2.13206,HEPG2@1.68461,HMEC@0.557503,HSMM@0.326821,HUVEC@1.10991,K562@1.23996,MCF7@0.328315,NHEK@0.590928,NHLF@0.837986,SKNSHRA@1.97765, 0 0 0 0 ENSG00000249896.1 ENST00000508601.1 chr4:6202460-6240044 5 2542 35034 intergenic 6.66 0 0,1,0 0 0,0,0 0 2.6974367757036 80.64 4.86624704956727 0.470257464177656 86.169 5.08772619984264 0.874721698921048 78.74 0 1 chimp,human,macaque,orangutan, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0.0126565,H1HESC@0.159367,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0.001051,MCF7@0.008017,NHEK@0,NHLF@0,SKNSHRA@0.152255, 0 0 0 0 ENSG00000251408.1 ENST00000507424.1 chr4:6204055-6208376 2 4119 200 intergenic 5.22 0 0,0,0 0 0,0,0 0 0 0 0 0 0 2.18281136198106 0 0 0 1 chimp,human, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0.137037,H1HESC@0.117057,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0.000648,K562@0,MCF7@0.0248335,NHEK@0,NHLF@0,SKNSHRA@0.336746, 0 0 0 0 ENSG00000251580.1 ENST00000515205.1 chr4:6672452-6675557 2 420 2683 intergenic -4.63 0 1,1,1 1 0,0,0 0 0 0 0 0 0 0 0 0 0 1 chimp,human,orangutan, antisense antisense A549@0.499057,AG04450@0.793945,BJ@0.583333,GM12878@0.114535,H1HESC@0.256453,HELAS3@0.175239,HEPG2@1.33557,HMEC@0.06792,HSMM@0.185583,HUVEC@0.266593,K562@0.460576,MCF7@0.536744,NHEK@0.441486,NHLF@0.280805,SKNSHRA@1.26687, 0 0 0 0 ENSG00000251580.1 ENST00000513179.1 chr4:6672455-6675550 2 404 2689 intergenic -2.44 0 1,1,1 1 0,0,0 0 0 0 0 0 0 0 0 0 0 1 chimp,human,orangutan, antisense antisense A549@0.499057,AG04450@0.793945,BJ@0.583333,GM12878@0.114535,H1HESC@0.256453,HELAS3@0.175239,HEPG2@1.33557,HMEC@0.06792,HSMM@0.185583,HUVEC@0.266593,K562@0.460576,MCF7@0.536744,NHEK@0.441486,NHLF@0.280805,SKNSHRA@1.26687, 0 0 0 0 ENSG00000170846.10 ENST00000307533.6 chr4:6675178-6677774 2 2309 285 intergenic 53.16 1 1,1,1 0 0,0,0 0 0 0 0 0 0 0 0 0 0 0 dog,human,macaque,marmoset,orangutan, lincRNA processed_transcript A549@2.53024,AG04450@2.05661,BJ@1.91375,GM12878@1.66711,H1HESC@3.48498,HELAS3@2.40735,HEPG2@2.5688,HMEC@1.9008,HSMM@2.16094,HUVEC@1.60149,K562@14.4652,MCF7@7.4185,NHEK@1.77728,NHLF@2.40299,SKNSHRA@2.34779, 0 0 0 0 ENSG00000170846.10 ENST00000444232.2 chr4:6675178-6677774 2 2240 354 intergenic 53.16 1 1,1,1 0 0,0,0 0 0 0 0 0 0 0 0 0 0 0 dog,human,macaque,marmoset,orangutan, lincRNA processed_transcript A549@2.53024,AG04450@2.05661,BJ@1.91375,GM12878@1.66711,H1HESC@3.48498,HELAS3@2.40735,HEPG2@2.5688,HMEC@1.9008,HSMM@2.16094,HUVEC@1.60149,K562@14.4652,MCF7@7.4185,NHEK@1.77728,NHLF@2.40299,SKNSHRA@2.34779, 0 0 0 0 ENSG00000170846.10 ENST00000539238.1 chr4:6675803-6676299 1 496 0 intergenic 0 0 0,1,1 1 0,0,0 0 0 0 0 0 0 0 0 0 0 0 chimp,dog,horse,human,macaque,marmoset,orangutan, lincRNA processed_transcript A549@2.53024,AG04450@2.05661,BJ@1.91375,GM12878@1.66711,H1HESC@3.48498,HELAS3@2.40735,HEPG2@2.5688,HMEC@1.9008,HSMM@2.16094,HUVEC@1.60149,K562@14.4652,MCF7@7.4185,NHEK@1.77728,NHLF@2.40299,SKNSHRA@2.34779, 0 0 0 0 ENSG00000246526.2 ENST00000499502.2 chr4:6689175-6692246 3 1818 1249 intergenic 4.22 1 0,1,1 1 0,0,0 0 0 0 2.17931793179318 0 0 2.18701870187019 0 0 0 0 chimp,horse,human,orangutan, lincRNA processed_transcript A549@0.0513105,AG04450@0.030423,BJ@0.0171505,GM12878@0.0355895,H1HESC@0.0546725,HELAS3@0.79184,HEPG2@1.25587,HMEC@0.008994,HSMM@0.034873,HUVEC@0.0508495,K562@0.057593,MCF7@0.378758,NHEK@0.0267677,NHLF@0.009584,SKNSHRA@0.061416, 0 0 0 0 ENSG00000187904.3 ENST00000441093.1 chr4:6997068-7000685 2 589 3026 intronic -13.50 0 0,0,1 0 0,0,0 0 11.5228023793787 0 5.50084889643464 9.47224058162591 0 5.66383701188455 12.7762723066755 0 0 0 chimp,human,macaque,orangutan, processed_transcript processed_transcript A549@0.042589,AG04450@0.0092,BJ@0.011936,GM12878@0.062034,H1HESC@0.0227385,HELAS3@0.0584055,HEPG2@0.068437,HMEC@0,HSMM@0,HUVEC@0,K562@0.126372,MCF7@0.0394565,NHEK@0.030648,NHLF@0.070464,SKNSHRA@0.0420095, 1 96 0 0 ENSG00000245748.1 ENST00000500031.1 chr4:7032281-7047958 4 4296 11375 exonic 7.97 0 0,0,1 0 0,0,0 14.0630819366853 27.6527472527473 0 22.1641061452514 43.9398681318681 0 24.383147113594 49.4404395604396 0 0 0 chimp,horse,human,macaque,orangutan, lincRNA processed_transcript A549@0.0143675,AG04450@0.005012,BJ@0.0033225,GM12878@0.008576,H1HESC@0.0027505,HELAS3@0.0013025,HEPG2@0.0036825,HMEC@0,HSMM@0.004183,HUVEC@0,K562@0,MCF7@0.002697,NHEK@0.000526,NHLF@0.003233,SKNSHRA@0.0028265, 0 0 0 0 ENSG00000245562.2 ENST00000504402.1 chr4:7096298-7105056 3 289 8465 intergenic 5.35 0 1,1,1 0 0,0,0 0 0 0 0 0 0 0 0 0 0 0 chimp,human,macaque,marmoset,mouse,orangutan, lincRNA processed_transcript A549@0.017425,AG04450@0.0060705,BJ@0.015141,GM12878@0.0007555,H1HESC@0.0032995,HELAS3@0.0249125,HEPG2@0.0045695,HMEC@0.00273,HSMM@0.080288,HUVEC@0.0054825,K562@0.0025805,MCF7@0.017013,NHEK@0.005075,NHLF@0.010912,SKNSHRA@0.117955, 0 0 0 0 ENSG00000245562.2 ENST00000499242.2 chr4:7099795-7105107 2 1498 3812 intergenic 3.48 1 0,1,1 0 0,0,0 0 0 0 0 0 0 0 0 0 0 1 chimp,human,macaque,orangutan, lincRNA processed_transcript A549@0.017425,AG04450@0.0060705,BJ@0.015141,GM12878@0.0007555,H1HESC@0.0032995,HELAS3@0.0249125,HEPG2@0.0045695,HMEC@0.00273,HSMM@0.080288,HUVEC@0.0054825,K562@0.0025805,MCF7@0.017013,NHEK@0.005075,NHLF@0.010912,SKNSHRA@0.117955, 0 0 0 0 ENSG00000245468.2 ENST00000501888.2 chr4:7102967-7105112 1 2145 0 intergenic 4.02 0 0,1,1 0 0,0,0 0 0 0 0 0 0 0 0 0 0 1 chimp,human,macaque,marmoset, lincRNA processed_transcript A549@0.0275125,AG04450@0.0183775,BJ@0.033554,GM12878@0.0330885,H1HESC@0.0168215,HELAS3@0.0994475,HEPG2@0.118317,HMEC@0,HSMM@0.006991,HUVEC@0.011981,K562@0.032736,MCF7@0.056739,NHEK@0.0119523,NHLF@0.068661,SKNSHRA@0.111673, 0 0 0 0 ENSG00000251460.1 ENST00000510640.1 chr4:8068255-8069451 2 857 337 intronic 3.70 0 0,0,0 0 0,0,0 0 0 0 0 0 0 0 0 0 1 1 chimp,human,macaque,marmoset,orangutan, antisense antisense A549@0.010841,AG04450@0,BJ@0,GM12878@0,H1HESC@0.047263,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000249145.1 ENST00000509453.1 chr4:8321903-8325590 2 490 3195 intergenic -3.83 1 0,1,0 0 0,0,0 0 0 0 0 0 7.429 0 0 15.599 0 0 chimp,dog,human,macaque,marmoset, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0.004179, 0 0 0 0 ENSG00000248986.1 ENST00000503186.1 chr4:8322006-8325692 4 681 2999 intergenic -4.63 1 0,0,0 0 0,0,0 0 0 0 0 0 7.429 0 0 15.599 1 1 chimp,human,macaque,marmoset,orangutan, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0.0036345, 0 0 0 0 ENSG00000251615.1 ENST00000505448.1 chr4:8357038-8359103 1 2065 0 intergenic 2.13 0 0,0,1 0 0,0,0 0 0 0 0 0 0 23.9138014527845 0 0 1 1 chimp,human,macaque,marmoset,orangutan, lincRNA lincRNA A549@0.487382,AG04450@1.57057,BJ@1.16002,GM12878@0.42653,H1HESC@3.67634,HELAS3@0.693998,HEPG2@0.767699,HMEC@0.148643,HSMM@3.03486,HUVEC@0.930995,K562@0.045091,MCF7@1.93411,NHEK@0.626838,NHLF@0.472049,SKNSHRA@1.34734, 0 0 0 0 ENSG00000251186.1 ENST00000515186.1 chr4:8455137-8456669 2 662 868 exonic -18.98 0 0,0,0 0 0,0,0 24.7114803625378 0 0 41.9803625377643 0 0 65.5317220543807 0 0 0 1 human,macaque,marmoset,orangutan, antisense antisense A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000205959.3 ENST00000528132.1 chr4:8483997-8510922 2 566 26357 intergenic 0.94 0 0,0,0 0 0,1,0 0 0 0 0 0 0 0 1.54869674090374 0 0 1 chimp,human,macaque,marmoset, processed_transcript processed_transcript A549@0.060158,AG04450@0.0144715,BJ@0.02847,GM12878@0.025239,H1HESC@0.288981,HELAS3@0.045875,HEPG2@0.0326685,HMEC@0.02456,HSMM@0.144859,HUVEC@0.0223555,K562@0.0337075,MCF7@0.012026,NHEK@0.0107003,NHLF@0.0073685,SKNSHRA@0.0232125, 0 0 0 0 ENSG00000205959.3 ENST00000382488.2 chr4:8508555-8514337 4 3200 2576 intergenic 4.35 0 0,1,1 0 0,1,0 0 0 0 1.49375 0 0 15.07 0 0 1 1 chimp,human,macaque,marmoset,orangutan, processed_transcript processed_transcript A549@0.060158,AG04450@0.0144715,BJ@0.02847,GM12878@0.025239,H1HESC@0.288981,HELAS3@0.045875,HEPG2@0.0326685,HMEC@0.02456,HSMM@0.144859,HUVEC@0.0223555,K562@0.0337075,MCF7@0.012026,NHEK@0.0107003,NHLF@0.0073685,SKNSHRA@0.0232125, 0 0 0 0 ENSG00000250915.1 ENST00000514043.1 chr4:8747123-8747759 2 462 172 intergenic 0.09 0 0,0,0 0 0,0,0 64.0844155844156 0 0 60.6601731601732 0 0 62.1926406926407 0 0 0 0 chimp,cow,dog,horse,human,macaque,marmoset,orangutan,panda,pig, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000226350.1 ENST00000429096.1 chr4:9181486-9383121 7 1429 200194 encompassing 3.22 0 0,0,0 0 0,1,0 0 0 0 0 1.32510464849096 0 7.90412876137159 46.3273274923324 0 0 1 chimp,human, lincRNA lincRNA A549@0.0126405,AG04450@0.0047615,BJ@0.049135,GM12878@0.004073,H1HESC@0.0187095,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0.0074735,HUVEC@0.0033865,K562@0,MCF7@0.039141,NHEK@0.008261,NHLF@0.0026875,SKNSHRA@0.0581795, 8 6 5 6 ENSG00000249219.1 ENST00000504249.1 chr4:9924438-9925770 2 506 824 intronic 0 0 0,0,0 0 0,0,0 0 0 0 0 0 0.717 0 0 0.777 0 0 chimp,elephant,human,macaque,marmoset,orangutan, antisense antisense A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000250413.1 ENST00000503493.1 chr4:10008106-10011349 2 457 2784 intronic -2.96 0 0,1,0 0 0,0,0 0 0 0 0 0 5.289 0 0 5.947 0 0 chimp,dog,human,macaque,marmoset,orangutan, antisense antisense A549@0.066716,AG04450@0,BJ@0,GM12878@5.78953,H1HESC@0,HELAS3@0.081845,HEPG2@0.117127,HMEC@0,HSMM@0,HUVEC@0.034907,K562@0,MCF7@0.0177195,NHEK@0.0292603,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000249334.1 ENST00000505494.1 chr4:10686627-10699285 3 637 12017 intergenic 1.23 0 0,1,0 0 0,0,0 0 3.67371224099193 29.848 0 2.89889323458434 14.457 0 3.15935757676625 15.049 0 0 cat,chimp,dog,elephant,horse,human,macaque,marmoset,orangutan,panda,rat, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0.867263,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000251152.1 ENST00000515343.1 chr4:11470874-11479820 2 4017 4927 intergenic 0.64 0 0,0,0 0 0,0,0 6.63579785909883 3.4077531966714 0 17.3064475977097 10.0383600568297 0 17.915857605178 10.7326973817739 0 1 1 chimp,human,macaque,marmoset,orangutan, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0.037083,H1HESC@0.018084,HELAS3@0.002249,HEPG2@0,HMEC@0.006113,HSMM@0,HUVEC@0.00121,K562@0,MCF7@0,NHEK@0.00900367,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000249631.1 ENST00000510095.1 chr4:11627338-11815582 4 551 187687 intergenic -0.94 0 0,0,1 0 0,0,0 0 4.29652559846979 14.632 2.89473684210526 5.69142242137175 36.296 3.19419237749546 6.42040738037264 36.664 0 0 cat,chimp,cow,dog,elephant,horse,human,macaque,marmoset,orangutan,panda,rabbit, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0.0275675,H1HESC@0.018361,HELAS3@0.0060395,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0.078908,K562@0,MCF7@0,NHEK@0.0221223,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000249631.1 ENST00000508998.1 chr4:11724061-11773492 4 589 48836 intergenic -17.41 0 0,0,1 0 0,0,0 0 2.75108526496847 0 0 2.96641821607011 2.575 0 3.53624375460726 2.645 0 0 chimp,dog,human,macaque,marmoset,panda, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0.0275675,H1HESC@0.018361,HELAS3@0.0060395,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0.078908,K562@0,MCF7@0,NHEK@0.0221223,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000249631.1 ENST00000515286.1 chr4:11724075-11804042 5 673 79286 intergenic 3.99 1 0,0,0 0 0,0,0 0 2.26312337613198 0 0 3.28089448326313 2.575 0 3.79809802487198 2.645 0 0 cat,chimp,cow,horse,human,macaque,marmoset,orangutan, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0.0275675,H1HESC@0.018361,HELAS3@0.0060395,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0.078908,K562@0,MCF7@0,NHEK@0.0221223,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000249631.1 ENST00000509244.1 chr4:11724119-11791490 4 743 66622 intergenic -1.24 0 0,0,0 0 0,0,0 0 2.4951817717871 0 0 3.676578307466 2.575 0 4.25764762390802 2.645 0 0 chimp,cow,dog,horse,human,macaque,marmoset,orangutan,panda,rabbit, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0.0275675,H1HESC@0.018361,HELAS3@0.0060395,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0.078908,K562@0,MCF7@0,NHEK@0.0221223,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000248300.1 ENST00000506195.1 chr4:11742572-11771092 4 653 27861 intergenic -0.64 0 0,1,0 0 0,0,0 0 2.62962564157783 0 0 3.31072107964538 0 0 3.65453501310075 0 0 0 cat,chimp,cow,dog,horse,human,macaque,marmoset,orangutan,panda, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0.013289,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0.0041485,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000249631.1 ENST00000510639.1 chr4:11771930-11773508 3 424 1150 intergenic -12.86 0 0,0,1 0 0,0,0 0 53.12 0 0 41.9669565217391 0 0 44.4486956521739 0 0 0 chimp,dog,human,macaque,orangutan, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0.0275675,H1HESC@0.018361,HELAS3@0.0060395,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0.078908,K562@0,MCF7@0,NHEK@0.0221223,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000249631.1 ENST00000514452.1 chr4:11771992-11775495 2 385 3116 intergenic 3.99 0 0,0,1 0 0,0,0 0 19.604621309371 0 0 15.4884467265725 0 0 16.4043645699615 0 0 0 chimp,cow,human,macaque,marmoset,orangutan,rabbit, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0.0275675,H1HESC@0.018361,HELAS3@0.0060395,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0.078908,K562@0,MCF7@0,NHEK@0.0221223,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000248262.1 ENST00000514103.1 chr4:11916291-11921312 2 421 4598 intergenic 0 0 0,0,1 0 0,0,0 0 0 0 0 0 0 5.77197149643705 0 0 0 0 cat,chimp,elephant,human,macaque,marmoset,orangutan,rabbit, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0.0188225,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000251210.1 ENST00000515691.1 chr4:12225075-12249731 4 537 24113 intergenic -0.55 0 0,0,0 0 0,0,0 0 2.5242815079003 0 0 7.94666777257081 0 0 9.46319412764899 0 1 1 chimp,human,macaque,marmoset,orangutan, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000251210.1 ENST00000505386.1 chr4:12225106-12252910 4 606 27192 intergenic -0.55 1 0,0,0 0 0,0,0 0 2.2384524860253 0 0 7.04685201529862 0 0 8.39165931156222 0 0 0 chimp,elephant,guinea_pig,human,macaque,marmoset,orangutan,rabbit, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000250371.1 ENST00000506899.1 chr4:12860725-12866585 2 2692 3166 intergenic -1.09 1 0,0,0 0 0,0,0 0 0 0 0 1.88439671509792 0 0 1.90240050536955 0 0 0 chimp,horse,human,macaque,marmoset,orangutan, lincRNA lincRNA A549@0.0121465,AG04450@0.0089875,BJ@0.0144345,GM12878@0.082492,H1HESC@0.0538625,HELAS3@0.0433575,HEPG2@0.0259855,HMEC@0,HSMM@0.003055,HUVEC@0.001805,K562@0.0573475,MCF7@0.014334,NHEK@0.00856033,NHLF@0,SKNSHRA@0.0122705, 0 0 0 0 ENSG00000250098.1 ENST00000503163.1 chr4:12949198-12950294 2 314 780 intergenic 0 0 0,0,1 0 0,0,0 0 0 98.252 0 0 151.629 0 0 169.653 0 0 cat,chimp,human,macaque,marmoset,orangutan, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0.0704095,H1HESC@0.051316,HELAS3@0.037492,HEPG2@0.008632,HMEC@0,HSMM@0,HUVEC@0,K562@0.0084725,MCF7@0,NHEK@0.007296,NHLF@0,SKNSHRA@0.026111, 0 0 0 0 ENSG00000249512.2 ENST00000505835.1 chr4:13527943-13533041 4 2118 2974 intergenic 2.98 0 0,1,0 1 0,0,0 0 51.2111634162744 0 0 66.9737726967048 1.673 0 70.7192333557498 1.757 1 1 chimp,human,macaque,marmoset,orangutan, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0.0213025,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0.029553,HUVEC@0,K562@0.083209,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000249512.2 ENST00000536697.1 chr4:13527991-13535959 4 1895 6067 intergenic 2.90 0 0,1,1 0 0,0,0 0 25.1033459700016 0 0 33.6179330806 27.477 0 35.493489368716 33.496 0 0 chimp,horse,human,macaque,marmoset,orangutan, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0.0213025,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0.029553,HUVEC@0,K562@0.083209,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000246095.2 ENST00000503938.1 chr4:13547699-13548588 2 364 523 intergenic -12.67 0 0,1,1 0 0,0,0 0 0 0 0 0 0 0 0 3.71 0 0 cat,chimp,elephant,horse,human,macaque,marmoset,orangutan,panda, lincRNA lincRNA A549@0.0017185,AG04450@0.01061,BJ@0,GM12878@0.0055675,H1HESC@0.037624,HELAS3@0.0105065,HEPG2@0.013638,HMEC@0.012968,HSMM@0.038301,HUVEC@0,K562@0,MCF7@0.003256,NHEK@0.017611,NHLF@0.047823,SKNSHRA@0.017973, 0 0 0 0 ENSG00000246095.2 ENST00000501050.1 chr4:13547700-13549425 2 1261 462 intergenic 3.95 1 0,0,1 0 0,0,0 0 0 0 0 0 0 2.9421094369548 0 0 0 0 cat,chimp,human,marmoset,orangutan,panda, lincRNA lincRNA A549@0.0017185,AG04450@0.01061,BJ@0,GM12878@0.0055675,H1HESC@0.037624,HELAS3@0.0105065,HEPG2@0.013638,HMEC@0.012968,HSMM@0.038301,HUVEC@0,K562@0,MCF7@0.003256,NHEK@0.017611,NHLF@0.047823,SKNSHRA@0.017973, 0 0 0 0 ENSG00000250634.1 ENST00000510907.1 chr4:13656803-13932852 4 2224 273819 intergenic 5.68 0 0,0,0 0 0,0,0 0 7.61240819665546 0 9.74415467625899 12.5384907548417 0 11.404226618705 13.7207607945395 0 0 0 cat,chimp,cow,dog,elephant,horse,human,macaque,marmoset,mouse,orangutan,panda,pig,rabbit,rat, lincRNA lincRNA A549@0.037185,AG04450@0.014893,BJ@0.0032115,GM12878@0.003122,H1HESC@0.0039735,HELAS3@0.0104385,HEPG2@0.00857,HMEC@0,HSMM@0.0009235,HUVEC@0.004794,K562@0,MCF7@0,NHEK@0.00870633,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000250497.1 ENST00000508202.1 chr4:13779001-13783781 1 4780 0 intergenic 5.02 1 0,0,0 0 0,0,0 0 0 0 0 0 0 0 0 0 1 1 chimp,human,macaque,marmoset,orangutan, lincRNA lincRNA A549@0.000908,AG04450@0.0009375,BJ@0.0010125,GM12878@0.003065,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0.0020915,MCF7@0,NHEK@0.00165667,NHLF@0.0016145,SKNSHRA@0, 0 0 0 0 ENSG00000250634.1 ENST00000503532.1 chr4:13821734-13978699 5 577 156380 intergenic 4.43 0 0,1,0 0 0,0,0 0 9.65869036961248 0 0 16.7596879396342 0 0 17.5148996035298 0 0 0 chimp,dog,horse,human,macaque,marmoset,orangutan,panda, lincRNA lincRNA A549@0.037185,AG04450@0.014893,BJ@0.0032115,GM12878@0.003122,H1HESC@0.0039735,HELAS3@0.0104385,HEPG2@0.00857,HMEC@0,HSMM@0.0009235,HUVEC@0.004794,K562@0,MCF7@0,NHEK@0.00870633,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000248698.1 ENST00000502759.1 chr4:14113592-14141676 3 1981 26099 intergenic -0.11 1 1,1,1 0 0,0,0 0 9.91248706847006 0 9.73649671882887 14.6075711713092 3.179 12.761231701161 14.7602590137553 3 0 0 chimp,cow,dog,elephant,horse,human,macaque,marmoset,orangutan,panda,pig,rabbit, processed_transcript processed_transcript A549@0.169941,AG04450@0.0700225,BJ@1.48678,GM12878@0,H1HESC@0,HELAS3@0.0261675,HEPG2@0,HMEC@0.059461,HSMM@0.235186,HUVEC@0,K562@0,MCF7@0.001698,NHEK@0.050441,NHLF@0.323827,SKNSHRA@0.0928905, 0 0 0 0 ENSG00000248698.1 ENST00000511200.1 chr4:14113601-14128880 4 735 14538 intergenic -5.15 0 0,1,0 0 0,0,0 0 8.386985830238 0 19.4040816326531 12.9438712340074 3.179 15.5170068027211 12.6857889668455 3 1 1 chimp,human,macaque,marmoset,orangutan, processed_transcript processed_transcript A549@0.169941,AG04450@0.0700225,BJ@1.48678,GM12878@0,H1HESC@0,HELAS3@0.0261675,HEPG2@0,HMEC@0.059461,HSMM@0.235186,HUVEC@0,K562@0,MCF7@0.001698,NHEK@0.050441,NHLF@0.323827,SKNSHRA@0.0928905, 0 0 0 0 ENSG00000248698.1 ENST00000512754.1 chr4:14113614-14140361 4 819 25922 intergenic -0.11 0 0,1,0 0 0,0,0 0 9.98017128308001 0 23.5506715506716 14.7073142504436 3.179 20.045177045177 14.861044672479 3 1 1 chimp,human,macaque,marmoset,orangutan, processed_transcript processed_transcript A549@0.169941,AG04450@0.0700225,BJ@1.48678,GM12878@0,H1HESC@0,HELAS3@0.0261675,HEPG2@0,HMEC@0.059461,HSMM@0.235186,HUVEC@0,K562@0,MCF7@0.001698,NHEK@0.050441,NHLF@0.323827,SKNSHRA@0.0928905, 0 0 0 0 ENSG00000248698.1 ENST00000506739.1 chr4:14113644-14141110 2 1182 26282 intergenic -0.11 0 0,1,1 0 0,0,0 0 9.84346701164295 0 16.3181049069374 14.5058595236283 3.179 14.6844331641286 14.6574842097253 3 0 0 cat,chimp,cow,dog,elephant,horse,human,macaque,marmoset,mouse,orangutan,panda,pig,rabbit,rat, processed_transcript processed_transcript A549@0.169941,AG04450@0.0700225,BJ@1.48678,GM12878@0,H1HESC@0,HELAS3@0.0261675,HEPG2@0,HMEC@0.059461,HSMM@0.235186,HUVEC@0,K562@0,MCF7@0.001698,NHEK@0.050441,NHLF@0.323827,SKNSHRA@0.0928905, 0 0 0 0 ENSG00000251679.1 ENST00000514339.1 chr4:14136560-14145216 3 454 8198 intergenic -4.96 1 0,1,0 0 0,0,0 27.6211453744493 4.31812637228592 0 0 4.92156623566724 0 0 7.69090021956575 0 0 0 chimp,cow,dog,horse,human,macaque,marmoset,orangutan,pig,rabbit, lincRNA lincRNA A549@0,AG04450@0,BJ@0.012931,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000249988.1 ENST00000514863.1 chr4:14166079-14244437 2 315 78041 intergenic 0 1 0,0,0 0 0,0,0 0 5.07275662792635 0 0 5.91066234415243 46.203 3.08571428571429 6.96037980036135 39.581 0 0 cat,chimp,dog,horse,human,macaque,marmoset,orangutan, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0.012087,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000249988.1 ENST00000505628.1 chr4:14236873-14244436 3 496 7063 intergenic 3.43 1 0,1,0 0 0,0,0 0 0 0 0 0.898909811694747 0 1.95967741935484 2.68880079286422 7.047 1 1 chimp,human,macaque,marmoset,orangutan, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0.012087,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000251412.1 ENST00000507932.1 chr4:14384747-14410702 6 758 25187 intergenic 1.27 0 0,0,0 0 0,0,0 0 6.45972128478977 0 0 8.17683725731528 0 0 9.94663913923849 0 0 0 chimp,cow,human,macaque,marmoset,orangutan, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0.002693,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000248425.1 ENST00000514401.1 chr4:14392063-14395616 2 589 2962 intergenic -1.41 0 0,1,1 0 0,0,0 0 4.53072248480756 0 0 13.5793382849426 0 0 14.0813639432816 0 0 0 chimp,cow,human,macaque,marmoset,orangutan, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000248360.2 ENST00000506292.2 chr4:14630380-14718219 4 458 87375 intergenic -3.13 0 0,0,0 0 0,0,0 0 4.77903290414878 133.701 0 7.02759370529328 180.919 0 7.64086981402003 157.658 0 1 human,macaque,marmoset, processed_transcript processed_transcript A549@0,AG04450@0,BJ@0,GM12878@0.010888,H1HESC@0.022672,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0.0114993,NHLF@0,SKNSHRA@0.0021645, 0 0 0 0 ENSG00000247624.2 ENST00000500394.2 chr4:14911585-15003669 8 1622 90448 intergenic -1.39 1 0,1,1 0 0,0,0 0 3.91941225897753 213.892 1.87176325524044 7.2085949938086 389.359 1.92601726263872 8.31479966389528 436.474 0 0 chimp,human,macaque,marmoset,orangutan,rabbit, lincRNA processed_transcript A549@0.041804,AG04450@0.013745,BJ@0.019135,GM12878@0.0433245,H1HESC@0.011175,HELAS3@0.0483605,HEPG2@0.0023595,HMEC@0.006802,HSMM@0,HUVEC@0.006084,K562@0.0146125,MCF7@0.017038,NHEK@0.0129673,NHLF@0,SKNSHRA@0.026138, 0 0 0 0 ENSG00000247624.2 ENST00000501916.1 chr4:14978524-14996129 5 1801 15796 intergenic 2.79 0 0,0,0 0 0,0,0 0 0 0 7.7234869516935 8.17998227399342 0 7.72626318711827 8.99373259052925 0 0 1 chimp,human,macaque,orangutan, lincRNA processed_transcript A549@0.041804,AG04450@0.013745,BJ@0.019135,GM12878@0.0433245,H1HESC@0.011175,HELAS3@0.0483605,HEPG2@0.0023595,HMEC@0.006802,HSMM@0,HUVEC@0.006084,K562@0.0146125,MCF7@0.017038,NHEK@0.0129673,NHLF@0,SKNSHRA@0.026138, 0 0 0 0 ENSG00000249252.1 ENST00000502344.1 chr4:15006566-15429538 6 624 422338 exonic 10.59 0 0,1,1 0 0,0,0 59.6025641025641 13.9484394016167 69.256 49.9214743589744 15.4901832181807 94.129 46.1987179487179 16.556028583741 93.232 0 0 chimp,dog,horse,human,macaque,marmoset,orangutan,pig, antisense antisense A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0.0546545,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000249252.1 ENST00000513384.1 chr4:15008071-15229584 5 532 220973 exonic -3.77 0 0,0,0 0 0,0,0 237.592105263158 20.5223217316143 0 214.261278195489 22.9917591741978 0 203.789473684211 246.606490385703 0 0 0 cat,chimp,cow,dog,elephant,guinea_pig,horse,human,macaque,marmoset,mouse,opossum,orangutan,panda,pig,platypus,rabbit,rat, antisense antisense A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0.0546545,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000251379.1 ENST00000515495.1 chr4:15359765-15421656 4 867 61018 intronic -0.82 0 0,0,0 0 0,0,0 0 9.86644924448523 6.688 0 10.8247566291914 5.704 0 10.8303451440559 19.671 0 0 chimp,horse,human,macaque,marmoset,orangutan,rabbit, antisense antisense A549@0.003171,AG04450@0.0025735,BJ@0.005884,GM12878@0.0086805,H1HESC@0,HELAS3@0.002594,HEPG2@0,HMEC@0,HSMM@0.0094495,HUVEC@0,K562@0.00282,MCF7@0,NHEK@0.005989,NHLF@0.0022155,SKNSHRA@0.012822, 110 2 0 0 ENSG00000249234.1 ENST00000513586.1 chr4:16180562-16184743 2 412 3767 intronic -1.68 0 0,0,0 0 0,0,0 0 9.32970533581099 0 0 13.6487921422883 2.728 0 12.9054950889302 2.849 1 1 chimp,human,macaque,marmoset,orangutan, antisense antisense A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000225917.2 ENST00000440429.2 chr4:16228286-16259810 3 2544 28976 intergenic 4.20 0 1,1,1 1 0,1,0 8.40762578616352 2.09887493097736 0 24.5573899371069 8.19319436775262 217.318 34.9567610062893 9.53068056322473 164.253 0 1 chimp,human,orangutan, lincRNA lincRNA A549@0.390463,AG04450@0.301396,BJ@0.398794,GM12878@0.271045,H1HESC@0.878622,HELAS3@1.48689,HEPG2@1.06107,HMEC@0.126278,HSMM@0.0722595,HUVEC@0.341351,K562@0.174358,MCF7@0.729969,NHEK@0.404413,NHLF@0.206146,SKNSHRA@1.51436, 0 0 0 0 ENSG00000248138.1 ENST00000512370.1 chr4:16402053-16513810 3 432 111321 exonic 2.00 1 0,1,0 0 0,0,0 135.861111111111 19.8043495836365 0 174.513888888889 17.0592790219276 0 197.388888888889 20.5159134395127 0 0 0 cat,chimp,cow,dog,elephant,guinea_pig,horse,human,macaque,marmoset,mouse,opossum,orangutan,platypus,rabbit,rat, antisense antisense A549@0,AG04450@0,BJ@0,GM12878@0.0053885,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0.0117835,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000248138.1 ENST00000511818.1 chr4:16403821-16435865 4 367 31671 intergenic 0.25 0 0,0,1 0 0,0,0 38.5177111716621 3.5145085409365 0 6.51226158038147 3.262353572669 0 6.83923705722071 4.56193363013482 0 0 1 chimp,human,marmoset,orangutan, antisense antisense A549@0,AG04450@0,BJ@0,GM12878@0.0053885,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0.0117835,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000249998.1 ENST00000511735.1 chr4:16974898-17075526 3 448 100176 intergenic -2.31 0 0,0,0 0 0,0,0 0 10.4361823191184 0 0 13.0446015013576 0 5.42410714285714 15.9980833732631 0 1 1 chimp,human,macaque,marmoset,orangutan, lincRNA lincRNA A549@0,AG04450@0.010444,BJ@0,GM12878@0.0044695,H1HESC@0.019768,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000250819.1 ENST00000509964.1 chr4:17173380-17187682 6 1698 12594 intergenic 1.21 1 0,0,0 0 0,0,0 88.8610129564193 12.0514530728919 0 105.62308598351 18.027235191361 9.996 116.018256772674 19.1185485151659 10.336 0 0 chimp,cow,horse,human,macaque,marmoset,mouse,orangutan,panda,rabbit, lincRNA lincRNA A549@0,AG04450@0.0034745,BJ@0,GM12878@0,H1HESC@0.015588,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000249502.1 ENST00000511010.1 chr4:17589090-17616194 3 747 26353 intronic 0.00 0 0,1,1 1 0,0,0 0 10.1985732174705 24.139 0 12.1253367738018 48.228 0 15.0360869730202 50.192 1 1 chimp,human,macaque,marmoset,orangutan, antisense antisense A549@0.310133,AG04450@0.169484,BJ@0.225206,GM12878@0.830024,H1HESC@0.36846,HELAS3@0.424756,HEPG2@0.18842,HMEC@0.016378,HSMM@0.0383285,HUVEC@0.203363,K562@0.615,MCF7@0.130664,NHEK@0.0120033,NHLF@0.311012,SKNSHRA@0.24199, 0 0 0 0 ENSG00000251048.1 ENST00000503815.1 chr4:18489685-18491131 2 532 912 intergenic -3.14 1 0,0,0 0 0,0,0 0 0 0 0 1.8344298245614 0 0 1.86513157894737 0 0 1 human,macaque,marmoset,orangutan, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000248238.1 ENST00000505347.1 chr4:19173958-19458617 3 638 284017 intergenic -1.63 0 0,0,0 0 0,0,0 0 8.65757683518944 0 10.6394984326019 9.99238425868875 0 18.8996865203762 11.0697986388139 0.972 0 0 chimp,cow,dog,elephant,horse,human,macaque,marmoset,mouse,orangutan,pig,rabbit, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0.003145,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0.153288,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000248515.1 ENST00000511431.1 chr4:19457059-19911315 4 885 453365 intergenic 4.58 0 0,1,0 0 0,0,0 0 12.3436414368114 0 0 15.9721570919678 5.6 0 17.3557530907768 8.644 0 0 chimp,dog,horse,human,macaque,marmoset,orangutan,panda,rabbit, processed_transcript processed_transcript A549@0.0083745,AG04450@0,BJ@0,GM12878@0.009633,H1HESC@0,HELAS3@0.021565,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0.069082,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000249441.1 ENST00000508374.1 chr4:19748802-19756214 2 237 7173 intergenic -2.09 1 0,0,0 0 0,0,0 0 106.042241739858 0 0 63.6156419907988 0 0 67.5357590966123 0 0 1 chimp,human,orangutan, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000248228.1 ENST00000515882.1 chr4:20393812-20396479 4 597 2064 intronic 2.62 1 0,0,0 0 0,0,0 152.045226130653 0 7.106 100.155778894472 0 0 216.465661641541 2.97722868217054 0 0 0 cat,chimp,human,macaque,marmoset,mouse,orangutan, sense_intronic sense_intronic A549@0,AG04450@0.241796,BJ@1.74694,GM12878@0,H1HESC@0.0471555,HELAS3@0.0040135,HEPG2@0.011165,HMEC@0,HSMM@0,HUVEC@0.649767,K562@0,MCF7@0.045225,NHEK@0.027252,NHLF@0.0264955,SKNSHRA@1.33938, 0 0 0 0 ENSG00000250243.2 ENST00000515680.2 chr4:21306165-21318108 3 338 11601 intronic 1.50 0 0,1,0 0 0,0,0 0 7.58357038186363 144.005 0 11.3641065425394 220.625 5.94082840236686 13.0731833462633 249.664 0 0 cat,chimp,elephant,horse,human,macaque,marmoset,orangutan,panda,pig, antisense antisense A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000250092.2 ENST00000505528.2 chr4:21583719-21615351 4 717 30909 intronic 0.91 1 0,0,0 0 0,0,0 0 2.40499530880973 0 0 2.86573489922029 0 3.38912133891213 3.44964249894853 0 0 0 cat,chimp,elephant,horse,human,macaque,marmoset,orangutan,pig, antisense antisense A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0.014922, 0 0 0 0 ENSG00000248343.1 ENST00000511835.1 chr4:21699073-21720649 2 946 20628 exonic 0 0 0,1,0 0 0,0,0 142.062367864693 5.8933973240256 67.37 130.482029598309 7.98996509598604 142.348 132.087737843552 9.56277874733372 133.014 0 0 cat,dog,elephant,horse,human,macaque,marmoset,orangutan,panda,pig,rabbit, antisense antisense A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0.023019,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0.0023975, 0 0 0 0 ENSG00000250039.2 ENST00000510705.2 chr4:21950638-22331953 4 1889 379420 intergenic 9.80 0 0,1,0 0 0,0,0 13.8883006881948 5.84696905803595 107.461 7.46373742721016 7.2135285435665 131.476 5.87930121757544 7.8542195983343 111.654 0 0 chimp,horse,human,macaque,marmoset,orangutan,panda,pig, antisense antisense A549@0.0011465,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0.037071,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000248837.1 ENST00000511453.1 chr4:22999174-23058485 4 1305 58000 intergenic -2.81 0 0,1,1 0 0,0,0 0 46.044224137931 0 0 55.9143793103448 3.346 3.30268199233716 56.3741379310345 3.514 0 0 chimp,guinea_pig,human,macaque,marmoset,orangutan,rabbit, lincRNA processed_transcript A549@0,AG04450@0,BJ@0,GM12878@0.0063135,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0.681502,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0.003829, 0 0 0 0 ENSG00000248837.1 ENST00000503017.1 chr4:23001209-23042638 3 544 40881 intergenic -0.14 0 0,0,1 0 0,0,0 0 53.3311562828698 0 0 64.9968934223723 0 3.45588235294118 64.3994031457156 0 0 0 cat,chimp,elephant,horse,human,macaque,marmoset,orangutan,panda, lincRNA processed_transcript A549@0,AG04450@0,BJ@0,GM12878@0.0063135,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0.681502,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0.003829, 0 0 0 0 ENSG00000248837.1 ENST00000506425.1 chr4:23004776-23043141 3 954 37407 intergenic -0.14 0 0,0,0 0 0,0,0 0 52.8339882909616 0 0 65.5123105301147 0 1.9706498951782 64.9158980939396 0 0 0 cat,chimp,dog,horse,human,macaque,marmoset,orangutan,panda, lincRNA processed_transcript A549@0,AG04450@0,BJ@0,GM12878@0.0063135,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0.681502,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0.003829, 0 0 0 0 ENSG00000249645.1 ENST00000503394.1 chr4:23107125-23125110 5 541 17436 intergenic 1.14 0 0,0,1 0 0,0,0 4.15896487985213 56.7099105299381 0 18.4824399260628 69.7953085570085 0 39.5268022181146 71.0099220004588 0 0 0 cat,chimp,cow,dog,elephant,horse,human,macaque,marmoset,mouse,opossum,orangutan,panda,pig,rabbit,rat, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0.008586,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0.007537,HUVEC@0,K562@0.467406,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0.010186, 0 0 0 0 ENSG00000249547.1 ENST00000512563.1 chr4:23236248-23287196 2 569 50377 intergenic -0.69 0 0,0,0 0 0,0,0 0 25.3455545189273 0 10.7785588752197 32.9732219068226 0 15.4551845342706 32.59414018302 0 0 0 chimp,cow,dog,elephant,horse,human,macaque,marmoset,orangutan,panda,rabbit, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0.0190935,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000250137.1 ENST00000514290.1 chr4:23562546-23770275 2 449 207278 intergenic -5.03 0 0,0,0 0 0,0,0 152.944320712695 19.0588774496087 163.984 140.701559020045 27.3448171055298 207.461 153.45434298441 27.974314688486 185.98 0 0 cat,chimp,cow,dog,elephant,guinea_pig,horse,human,macaque,marmoset,mouse,opossum,orangutan,panda,pig,rabbit,rat, antisense antisense A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0.017533,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000251292.1 ENST00000507666.1 chr4:23724885-23735202 4 635 9676 intergenic 2.88 0 0,0,0 0 0,0,0 0 5.76508887970236 208.318 0 16.0877428689541 233.72 0 16.4507027697396 210.768 0 1 chimp,human, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0.050454,HELAS3@0.021371,HEPG2@0.0839925,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000250137.1 ENST00000499715.2 chr4:23764550-23770248 2 557 5139 intergenic -3.39 0 0,0,0 0 0,0,0 0 4.46468184471687 0 0 13.0589608873322 0 0 16.5298696244406 0 1 1 chimp,human,macaque,marmoset,orangutan, antisense antisense A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0.017533,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000249453.1 ENST00000506514.1 chr4:23781213-23784183 3 439 2527 intergenic -7.40 0 0,0,1 0 0,0,0 96.1822323462415 20.1978630787495 86.946 122.715261958998 12.4198654531064 90.304 100.646924829157 8.6806489908983 95.589 0 0 cat,chimp,dog,elephant,horse,human,macaque,marmoset,orangutan,panda,rabbit, antisense antisense A549@0.009822,AG04450@0,BJ@0,GM12878@0.0106065,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0.191239,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000248545.1 ENST00000515188.1 chr4:25610333-25621087 2 406 10346 intergenic -8.56 1 0,0,0 0 0,0,0 0 0 0 9.42857142857143 0 0 9.36945812807882 0 0 0 0 cat,chimp,dog,elephant,horse,human,macaque,marmoset,mouse,orangutan,panda,rabbit,rat, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0.0198225,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000250541.1 ENST00000510905.1 chr4:25771888-25775199 2 481 2828 intronic -2.10 0 0,0,0 0 0,0,0 0 21.1782178217822 7.13 2.80665280665281 15.7984441301273 6.137 2.88981288981289 20.0657708628006 7.988 0 0 chimp,dog,elephant,human,macaque,marmoset,orangutan, antisense antisense A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000251009.2 ENST00000503085.1 chr4:25866503-25871172 2 760 3907 intergenic 0.73 0 0,0,0 0 0,0,0 0 28.3747120552854 0 0 17.9925774251344 8.055 0 17.2142308676734 8.224 0 0 cat,chimp,human,macaque,marmoset,orangutan, lincRNA lincRNA A549@0.005697,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0.010747,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0.0173063,NHLF@0,SKNSHRA@0.021179, 0 0 0 0 ENSG00000240005.1 ENST00000489096.1 chr4:26861428-26862203 2 293 480 intergenic 0 1 1,1,1 0 0,0,0 0 0 73.738 0 0 275.497 0 0 242.934 0 0 chimp,cow,horse,human,macaque,marmoset,orangutan, antisense antisense A549@0.23914,AG04450@0.101137,BJ@0.175069,GM12878@0.183948,H1HESC@0.0710245,HELAS3@0.198784,HEPG2@0.200437,HMEC@0.087765,HSMM@0.036944,HUVEC@0.066635,K562@0.154809,MCF7@0.0421535,NHEK@0.186278,NHLF@0.083032,SKNSHRA@0.123386, 0 0 0 0 ENSG00000240005.1 ENST00000467484.1 chr4:26861428-26862221 2 480 311 intergenic -1.76 1 1,1,1 0 0,0,0 0 0 73.738 0 0 275.497 0 0 242.934 0 0 chimp,cow,human,macaque,marmoset,orangutan,panda,pig, antisense antisense A549@0.23914,AG04450@0.101137,BJ@0.175069,GM12878@0.183948,H1HESC@0.0710245,HELAS3@0.198784,HEPG2@0.200437,HMEC@0.087765,HSMM@0.036944,HUVEC@0.066635,K562@0.154809,MCF7@0.0421535,NHEK@0.186278,NHLF@0.083032,SKNSHRA@0.123386, 0 0 0 0 ENSG00000240005.1 ENST00000472346.1 chr4:26861431-26861866 2 325 108 intergenic 0.15 1 0,0,1 0 0,0,0 0 0 73.738 0 0 238.962 0 0 205.58 0 0 chimp,human,macaque,marmoset,orangutan, antisense antisense A549@0.23914,AG04450@0.101137,BJ@0.175069,GM12878@0.183948,H1HESC@0.0710245,HELAS3@0.198784,HEPG2@0.200437,HMEC@0.087765,HSMM@0.036944,HUVEC@0.066635,K562@0.154809,MCF7@0.0421535,NHEK@0.186278,NHLF@0.083032,SKNSHRA@0.123386, 0 0 0 0 ENSG00000251080.1 ENST00000506878.1 chr4:27135618-27141673 3 479 5572 intergenic 1.86 0 0,1,0 0 0,0,0 0 14.106783919598 191.997 0 24.7754845656856 229.957 0 23.9547738693467 211.741 1 1 chimp,human,macaque,marmoset,orangutan, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0.012608,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000205830.1 ENST00000382007.1 chr4:27209127-27220026 2 2507 8390 intergenic 4.08 0 0,0,0 0 0,0,0 73.0753889110491 59.0184743742551 0 69.0945353011568 57.4643623361144 1.195 68.7363382528919 61.6064362336114 1.255 0 0 chimp,cow,elephant,horse,human,macaque,marmoset,orangutan,panda, lincRNA lincRNA A549@0,AG04450@0.0025705,BJ@0.0028935,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0.009792,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0.010361,NHLF@0.007742,SKNSHRA@0, 0 0 0 0 ENSG00000249699.1 ENST00000512873.1 chr4:27219101-27283847 6 2796 61940 intergenic 0.22 0 0,0,0 0 0,0,0 29.1695278969957 25.0754924120116 0 41.9027181688126 34.2327897965773 0 38.3608726752504 35.0779141104294 2.35 0 1 chimp,human,macaque,orangutan, lincRNA lincRNA A549@0,AG04450@0.0008,BJ@0.012159,GM12878@0.07668,H1HESC@0.0144525,HELAS3@0,HEPG2@0.001553,HMEC@0,HSMM@0.0030955,HUVEC@0,K562@0,MCF7@0.0297535,NHEK@0,NHLF@0.0062515,SKNSHRA@0, 0 0 0 0 ENSG00000251325.1 ENST00000513616.1 chr4:27264128-27268876 2 647 4099 intergenic -3.24 1 0,0,0 0 0,0,0 8.98608964451314 2.76213710661137 32.1 9.06491499227202 3.06147840936814 114.625 11.2642967542504 3.65552573798487 119.896 0 0 cat,chimp,cow,dog,guinea_pig,horse,human,macaque,marmoset,orangutan,panda,rabbit, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0.006013,SKNSHRA@0, 0 0 0 0 ENSG00000251410.1 ENST00000509666.1 chr4:27969345-27986685 2 598 16740 intergenic 1.93 0 0,1,0 0 0,0,0 0 8.53733572281959 0 0 11.5410991636798 0 0 12.4187574671446 0 0 0 chimp,horse,human,macaque,orangutan, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0.020257,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000250064.1 ENST00000509416.1 chr4:28437071-28601897 4 708 164112 intergenic 5.29 0 0,0,0 0 0,0,0 0 9.30679048454714 0 1.35028248587571 12.0839609534952 0 1.3728813559322 12.8120186214293 0 0 0 cat,chimp,cow,guinea_pig,human,macaque,marmoset,orangutan,rabbit, lincRNA lincRNA A549@0,AG04450@0.014612,BJ@0.0254175,GM12878@0,H1HESC@0.0040875,HELAS3@0,HEPG2@0,HMEC@0.017253,HSMM@0,HUVEC@0,K562@0,MCF7@0.008471,NHEK@0.067388,NHLF@0,SKNSHRA@0.021287, 0 0 0 0 ENSG00000248183.1 ENST00000511520.1 chr4:28754425-28754905 2 427 51 intergenic -4.25 0 0,0,0 0 0,0,0 0 0 0 0 0 0 0 0 0 0 0 NA lincRNA lincRNA A549@0,AG04450@0.0138015,BJ@0,GM12878@0,H1HESC@0,HELAS3@0.010896,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0.0379957,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000250190.1 ENST00000514802.1 chr4:28998146-29016216 3 684 17382 intergenic -1.50 0 0,0,0 0 0,0,0 0 6.82458865493039 0 0 10.3060637441031 0 0 13.5033367851801 0 0 0 chimp,cow,dog,elephant,horse,human,macaque,marmoset,orangutan,panda,rabbit, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000249228.1 ENST00000514855.1 chr4:29048213-29050387 2 1602 570 intergenic 7.62 0 0,1,0 0 0,0,0 0 0 0 0 0 0 0 0 0 0 1 chimp,human, lincRNA lincRNA A549@0,AG04450@0.011149,BJ@0.01114,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0.0050135,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000248176.1 ENST00000503299.1 chr4:29119930-29204392 3 755 83703 intergenic 0 1 0,1,0 0 0,0,0 0 8.47046103484941 0 0 11.66683392471 0 0 12.6096914089101 0 0 0 chimp,elephant,horse,human,marmoset, lincRNA lincRNA A549@0.0057275,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0.019441,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000248338.1 ENST00000512268.1 chr4:29216020-29222784 3 572 6188 intergenic 4.09 1 0,0,0 0 0,0,0 280.222027972028 6.83904330963154 0 310.297202797203 1.97527472527473 0 399.167832167832 5.21186166774402 0 0 0 cat,chimp,guinea_pig,human,macaque,marmoset,mouse,orangutan, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0.0046155,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000249678.1 ENST00000509136.1 chr4:30777879-30795592 3 177 17532 intronic 0 0 0,1,0 0 0,0,0 142.372881355932 50.9176363221538 0 87.7627118644068 58.7266712297513 0 60.4293785310734 56.4373146246863 16.49 0 0 chimp,dog,elephant,guinea_pig,horse,human,macaque,marmoset,orangutan,pig, antisense antisense A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000251182.1 ENST00000515292.1 chr4:31172766-31213297 5 502 40021 intergenic 2.14 0 0,0,0 0 0,0,0 0 16.3430199145449 0 4.28486055776892 25.7963569126209 0 0 26.7847879863072 1.944 0 0 chimp,dog,elephant,human,macaque,marmoset,orangutan,panda,pig, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0.009744,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000251434.1 ENST00000505636.1 chr4:31351906-31353347 2 600 839 intergenic -9.98 0 0,1,0 0 0,0,0 0 0 0 0 0 0 6.075 0 0 0 1 chimp,human,macaque,orangutan, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0.009716,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0.0232225,K562@3.07468,MCF7@0.0034155,NHEK@0,NHLF@0,SKNSHRA@0, 1 96 0 0 ENSG00000249882.1 ENST00000510420.1 chr4:31508288-31560443 3 423 51728 intergenic -4.17 1 0,0,1 0 0,0,0 0 0 0 0 0.503402412619858 0 0 2.99520569130838 0 1 1 chimp,human,macaque,marmoset,orangutan, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000251129.1 ENST00000513211.1 chr4:31999019-32157028 3 731 157274 intergenic 1.61 0 0,1,0 0 0,0,0 0 6.11664992306421 0 0 8.41256024517721 0 0 9.67969912382212 0 0 0 chimp,horse,human,orangutan, lincRNA lincRNA A549@9.95065,AG04450@0.0030535,BJ@0.004409,GM12878@0.201587,H1HESC@0.191438,HELAS3@0.095018,HEPG2@0.0169545,HMEC@0,HSMM@0.0028035,HUVEC@0.0838815,K562@23.1472,MCF7@2.04348,NHEK@0.00869567,NHLF@0.007916,SKNSHRA@0, 9 6 0 0 ENSG00000251329.1 ENST00000515181.1 chr4:32352660-32354842 2 847 1333 intergenic -0.89 1 0,0,0 0 0,0,0 0 0 0 0 0 0 0 0 0 0 0 cat,chimp,cow,elephant,guinea_pig,horse,human,macaque,marmoset,orangutan,rabbit, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000248417.1 ENST00000515263.1 chr4:33435132-33439499 2 330 4035 intergenic 2.06 1 0,0,1 0 0,0,0 432.4 7.94399008674102 0 541.333333333333 17.1033457249071 0 567.315151515152 26.0579925650558 0 0 0 cat,chimp,cow,dog,elephant,guinea_pig,horse,human,macaque,marmoset,mouse,opossum,orangutan,panda,pig,platypus,rabbit,rat, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000250954.1 ENST00000512581.1 chr4:33777969-34041504 3 437 263094 intergenic -4.63 0 0,1,0 0 0,0,0 0 8.1959033653371 0 0 12.3288444434309 3.472 0 13.9943936387755 3.626 0 0 cat,chimp,cow,dog,horse,human,macaque,marmoset,orangutan,panda,pig, lincRNA lincRNA A549@0,AG04450@0.0013415,BJ@0,GM12878@0.002209,H1HESC@0,HELAS3@0.010418,HEPG2@0.0322425,HMEC@0,HSMM@0,HUVEC@0,K562@0.0608135,MCF7@0.0008555,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000250723.1 ENST00000504795.1 chr4:33852213-33893771 4 537 41015 intergenic 0 0 0,0,0 0 0,0,0 12.1527001862197 6.28453004998171 0 11.6927374301676 8.05771059368524 0 11.1359404096834 9.00436425697916 0 0 0 chimp,dog,horse,human,macaque,marmoset,orangutan,panda,rabbit, processed_transcript processed_transcript A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000250723.1 ENST00000505326.1 chr4:33883237-33981558 3 458 97859 intergenic -4.26 0 0,0,0 0 0,0,0 0 7.753747739094 0 0 10.8112079624766 0 0 13.126815111538 0 0 0 cat,chimp,cow,dog,elephant,horse,human,macaque,marmoset,mouse,orangutan,panda,pig, processed_transcript processed_transcript A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000250723.1 ENST00000506650.1 chr4:33883320-33981429 4 574 97529 intergenic -1.90 0 0,1,0 0 0,0,0 0 7.77998338955593 0 0 10.8477888627998 0 0 13.1712311209999 0 0 0 cat,chimp,cow,dog,elephant,horse,human,macaque,marmoset,orangutan,panda,pig, processed_transcript processed_transcript A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000250723.1 ENST00000515733.1 chr4:33890590-33976135 2 407 85136 intergenic -1.90 0 0,0,0 0 0,0,0 0 8.91249295245255 0 0 12.3959781995865 0 0 14.8869925765834 0 0 0 cat,chimp,cow,dog,elephant,horse,human,macaque,marmoset,orangutan,panda,pig,rabbit, processed_transcript processed_transcript A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000250954.1 ENST00000505018.1 chr4:33897961-34041515 5 2399 141147 intergenic 6.64 0 0,1,1 0 0,0,0 0 8.65363769686922 0 0.930387661525636 12.641033815809 3.472 1.94330971238016 15.5540677449751 3.626 0 0 chimp,cow,dog,elephant,guinea_pig,horse,human,macaque,marmoset,orangutan,pig,rabbit, lincRNA lincRNA A549@0,AG04450@0.0013415,BJ@0,GM12878@0.002209,H1HESC@0,HELAS3@0.010418,HEPG2@0.0322425,HMEC@0,HSMM@0,HUVEC@0,K562@0.0608135,MCF7@0.0008555,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000248685.1 ENST00000513843.1 chr4:34122516-34260749 4 542 137685 intergenic -10.88 1 0,1,1 0 0,0,0 0 7.54812071031703 33.75 0 9.83299560591205 4.08 0 10.4266405200276 4.24 0 0 chimp,cow,dog,elephant,horse,human,macaque,marmoset,orangutan,panda,pig,rabbit, lincRNA lincRNA A549@0.006177,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0.0702615,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000248685.1 ENST00000514877.1 chr4:34125128-34271369 4 542 145693 intergenic -5.09 0 0,0,1 0 0,0,0 0 7.11909288709821 0 0 9.33529407727207 0 15.7693726937269 9.89814884723357 1.813 0 0 cat,chimp,cow,dog,elephant,horse,human,macaque,marmoset,mouse,orangutan,panda,pig,rabbit,rat, lincRNA lincRNA A549@0.006177,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0.0702615,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000250597.1 ENST00000514737.1 chr4:34659228-34670362 4 242 10886 intergenic -3.54 0 0,0,1 0 0,0,0 0 0 0 0 0 0 0 0 1.554 0 1 chimp,human,marmoset,orangutan, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0.006742,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000250597.1 ENST00000513564.1 chr4:34659228-34671018 2 277 11511 intergenic -5.39 0 0,0,1 0 0,0,0 159.075812274368 0 0 116.581227436823 0 0 139.26714801444 0 1.554 0 0 cat,chimp,cow,dog,elephant,guinea_pig,horse,human,macaque,marmoset,orangutan,panda,pig,rabbit, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0.006742,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000250597.1 ENST00000505967.1 chr4:34670388-34671054 2 297 367 intergenic -7.23 0 0,1,1 0 0,0,0 148.363636363636 0 0 108.73063973064 0 0 129.888888888889 0 0 0 0 cat,chimp,cow,dog,elephant,guinea_pig,horse,human,macaque,marmoset,opossum,orangutan,panda,pig,rabbit, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0.006742,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000251160.1 ENST00000513032.1 chr4:36008245-36047656 3 746 38661 intergenic 1.79 0 0,0,0 0 0,0,0 0 15.1023512066424 0 5.12332439678284 21.9782726778925 0 5.52412868632708 22.4727761827164 0 0 0 chimp,cow,dog,elephant,guinea_pig,human,macaque,marmoset,opossum,orangutan, processed_transcript processed_transcript A549@0.006918,AG04450@0,BJ@0,GM12878@0.577284,H1HESC@0,HELAS3@0.243667,HEPG2@0.087824,HMEC@0.015363,HSMM@0,HUVEC@0,K562@0,MCF7@0.234046,NHEK@0.421749,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000251160.1 ENST00000505837.1 chr4:36047598-36048907 2 675 632 intergenic -1.18 0 0,0,0 0 0,0,0 0 0 0 0 0 0 0 0 0 0 0 cat,chimp,cow,elephant,horse,human,macaque,marmoset,orangutan, processed_transcript processed_transcript A549@0.006918,AG04450@0,BJ@0,GM12878@0.577284,H1HESC@0,HELAS3@0.243667,HEPG2@0.087824,HMEC@0.015363,HSMM@0,HUVEC@0,K562@0,MCF7@0.234046,NHEK@0.421749,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000247193.2 ENST00000499292.2 chr4:36245738-36275842 5 1443 28653 exonic -2.52 1 0,1,0 0 0,0,0 11.969507969508 7.72802149862144 72.859 6.56202356202356 14.2545981223607 91.818 7.61677061677062 15.3085889784665 99.308 0 0 cat,chimp,cow,dog,elephant,guinea_pig,horse,human,macaque,marmoset,mouse,orangutan,pig,rabbit,rat, lincRNA processed_transcript A549@0,AG04450@0,BJ@0,GM12878@0.153553,H1HESC@0,HELAS3@0,HEPG2@0.0014715,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000247193.2 ENST00000502245.1 chr4:36258140-36275562 3 1040 16378 intergenic 0.64 1 1,1,1 0 0,0,0 14.0692307692308 7.71034314324093 85.691 6.23942307692308 12.9216021492246 102.365 9.4 13.415984857736 117.708 0 0 cat,chimp,dog,elephant,guinea_pig,horse,human,macaque,marmoset,mouse,orangutan,pig,rabbit,rat, lincRNA processed_transcript A549@0,AG04450@0,BJ@0,GM12878@0.153553,H1HESC@0,HELAS3@0,HEPG2@0.0014715,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000251438.1 ENST00000504344.1 chr4:36312812-36394032 3 538 80678 intronic 2.97 0 0,1,0 0 0,0,0 0 1.89089962567243 0 0 3.78918664319889 0 0 4.06674682069461 0 0 0 chimp,horse,human,macaque,marmoset,orangutan,panda, antisense antisense A549@0.0114755,AG04450@0,BJ@0,GM12878@0.0054055,H1HESC@0,HELAS3@0,HEPG2@0.0040215,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0.00471933,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000248215.1 ENST00000510597.1 chr4:36498159-36643522 5 771 144584 intergenic -2.12 0 0,0,0 0 0,0,0 0 2.613076135672 0 9.64980544747082 4.36367094560947 6.126 4.46822308690013 10.9307461406518 6.672 0 0 chimp,cow,dog,elephant,guinea_pig,horse,human,macaque,marmoset,mouse,orangutan,panda,pig,rabbit, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0.0025975,H1HESC@0,HELAS3@0.0125425,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0.014129,K562@0.036312,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0.0073565, 0 0 0 0 ENSG00000248215.1 ENST00000505298.1 chr4:36498315-36643522 6 782 144415 intergenic -3.44 0 0,0,0 0 0,0,0 0 2.61613405809646 0 0 4.36877748156355 6.126 0 10.9435377211508 6.672 0 0 chimp,cow,dog,elephant,guinea_pig,horse,human,macaque,marmoset,orangutan,pig,rabbit, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0.0025975,H1HESC@0,HELAS3@0.0125425,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0.014129,K562@0.036312,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0.0073565, 0 0 0 0 ENSG00000248215.1 ENST00000515128.1 chr4:36550506-36584352 2 754 33090 intergenic -2.79 0 0,0,0 0 0,0,0 0 0.521305530371713 0 35.763925729443 0.154125113327289 12.25 38.4854111405836 0.224841341795104 12.53 0 0 chimp,cow,dog,elephant,guinea_pig,horse,human,macaque,marmoset,mouse,opossum,orangutan,panda,pig,rabbit,rat, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0.0025975,H1HESC@0,HELAS3@0.0125425,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0.014129,K562@0.036312,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0.0073565, 0 0 0 0 ENSG00000247810.2 ENST00000508199.1 chr4:37080199-37127046 3 535 46308 intergenic 2.06 0 0,0,0 0 0,0,0 0 10.8098816619159 0 0 11.0998099680401 0 0 13.6242981774207 0 1 1 chimp,human,macaque,marmoset,orangutan, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0.0054,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000247810.2 ENST00000501725.2 chr4:37080204-37112665 3 427 32030 intergenic -1.19 1 0,0,1 0 0,0,0 0 10.2036840462067 0 0 9.633093974399 0 0 13.6086481423665 0 0 1 chimp,human,macaque,orangutan, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0.0054,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000248936.1 ENST00000503034.1 chr4:37589709-37590497 2 532 254 exonic 3.52 0 0,0,1 0 0,0,0 6.76315789473684 0 25.539 26.5883458646617 0 13.905 27.9755639097744 0 14.742 0 0 chimp,horse,human,macaque,marmoset,orangutan,pig, antisense antisense A549@0.366098,AG04450@0.0933165,BJ@0.341804,GM12878@0.215806,H1HESC@0.22537,HELAS3@0.047707,HEPG2@0.380611,HMEC@0.069011,HSMM@0.962666,HUVEC@1.63286,K562@0.0183975,MCF7@0.122514,NHEK@0.205412,NHLF@0.080183,SKNSHRA@0.546616, 0 0 0 0 ENSG00000251642.1 ENST00000506010.1 chr4:38288615-38289112 2 365 130 intergenic 2.54 1 0,1,1 0 0,0,0 0 0 0 0 0 0 16.3205479452055 0 0 0 0 cat,chimp,dog,elephant,guinea_pig,horse,human,macaque,marmoset,orangutan,panda,pig,rabbit, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000248227.1 ENST00000503465.1 chr4:38368535-38387380 2 498 18345 intergenic 0 0 0,0,1 0 0,0,0 14.7349397590361 19.9911147451622 0 34.4759036144578 24.3319160534205 0 29.9919678714859 25.5006268738076 0 0 0 cat,chimp,cow,dog,elephant,guinea_pig,horse,human,macaque,marmoset,mouse,orangutan,pig, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0.0225005,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000249534.1 ENST00000512517.1 chr4:38422283-38524801 8 2051 100453 intergenic 1.55 0 0,1,0 0 0,0,0 0 7.77926990731984 17.208 1.28181374939054 11.0092580609837 67.577 2.08044856167723 11.9836042726449 66.294 1 1 chimp,human,macaque,marmoset,orangutan, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0.098285,H1HESC@0.0043,HELAS3@0.002027,HEPG2@0.019295,HMEC@0,HSMM@0.0009995,HUVEC@0,K562@0.0061565,MCF7@0,NHEK@0.00512967,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000249667.1 ENST00000507056.1 chr4:38511388-38519677 3 754 7531 intergenic 6.17 0 0,0,0 0 0,0,0 0 2.19891116717567 0 0 3.18191475235693 3.315 0 4.4222546806533 3.367 0 0 cat,chimp,human,macaque,marmoset,orangutan, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0.0119525,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000251635.1 ENST00000512170.1 chr4:38565624-38572292 3 497 6167 intergenic 0.45 0 0,0,0 0 0,0,0 119.967806841046 25.9717853089022 0 48.7203219315895 46.2130695638074 16.601 48.0603621730382 47.8328198475758 23.328 0 0 cat,chimp,cow,dog,elephant,guinea_pig,horse,human,macaque,marmoset,mouse,orangutan,pig, lincRNA lincRNA A549@0.0043415,AG04450@0.013448,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0.049135,HSMM@0,HUVEC@0,K562@0,MCF7@0.0123365,NHEK@0.103186,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000231160.3 ENST00000515436.2 chr4:38619886-38621058 2 376 794 intergenic -19.87 0 0,0,0 0 0,0,0 31.5957446808511 0 0 0 0 7.463 0 0 12.991 0 0 chimp,cow,horse,human,marmoset,orangutan,pig, processed_transcript processed_transcript A549@0.247769,AG04450@0.193645,BJ@0.0587105,GM12878@0.039317,H1HESC@0.17089,HELAS3@0.0529075,HEPG2@0.080479,HMEC@0.005187,HSMM@0.17957,HUVEC@0.308032,K562@0.02243,MCF7@0.705309,NHEK@0.0129783,NHLF@0.090172,SKNSHRA@0.611298, 0 0 0 0 ENSG00000231160.3 ENST00000504219.1 chr4:38621311-38626196 2 625 4258 intergenic 2.31 1 0,0,1 0 0,1,0 0 23.5922968529826 58.446 2.3808 37.9426961014561 11.592 2.4096 38.3968999530296 18.238 1 1 chimp,human,macaque,marmoset,orangutan, processed_transcript processed_transcript A549@0.247769,AG04450@0.193645,BJ@0.0587105,GM12878@0.039317,H1HESC@0.17089,HELAS3@0.0529075,HEPG2@0.080479,HMEC@0.005187,HSMM@0.17957,HUVEC@0.308032,K562@0.02243,MCF7@0.705309,NHEK@0.0129783,NHLF@0.090172,SKNSHRA@0.611298, 0 0 0 0 ENSG00000249207.1 ENST00000509449.1 chr4:39114297-39128438 4 942 13193 exonic -7.98 0 0,0,1 0 0,0,0 104.617834394904 14.8080800424468 0 112.502123142251 18.6312438414311 0 126.389596602972 23.436291973016 0 0 0 chimp,cow,elephant,guinea_pig,horse,human,macaque,marmoset,opossum,orangutan,panda,rabbit,rat, antisense antisense A549@0.0154195,AG04450@0.0867615,BJ@0.0282275,GM12878@0.0212595,H1HESC@0,HELAS3@0.0146595,HEPG2@0.009009,HMEC@0,HSMM@0,HUVEC@0,K562@0.018174,MCF7@0,NHEK@0,NHLF@0.004125,SKNSHRA@0.0256235, 0 0 0 0 ENSG00000249685.1 ENST00000507579.1 chr4:39135533-39137228 2 453 1240 intergenic -0.73 0 0,0,1 0 0,0,0 0 0 0 8.74613686534216 0 0 8.93156732891832 0 0 0 0 chimp,dog,human,orangutan,panda, lincRNA lincRNA A549@0.448814,AG04450@1.45397,BJ@1.31906,GM12878@1.34831,H1HESC@0.17849,HELAS3@0.861413,HEPG2@0.57723,HMEC@0.098991,HSMM@0.705261,HUVEC@0.39699,K562@0.445811,MCF7@0.707994,NHEK@0.622171,NHLF@0.24898,SKNSHRA@0.84063, 0 0 0 0 ENSG00000249348.1 ENST00000504032.1 chr4:39529639-39596327 5 2782 63898 exonic 4.50 0 0,1,0 1 0,0,0 0 9.47283170052271 0 0.793673616103523 11.694450530533 39.24 0.816678648454349 15.6296284703747 31.562 0 0 cat,chimp,cow,dog,elephant,guinea_pig,horse,human,macaque,marmoset,mouse,orangutan,panda,rabbit, antisense antisense A549@0.282382,AG04450@0.21065,BJ@0.223398,GM12878@0.107556,H1HESC@0.365901,HELAS3@0.269621,HEPG2@0.489696,HMEC@0.057298,HSMM@0.220466,HUVEC@0.15571,K562@0.139623,MCF7@0.520512,NHEK@0.127639,NHLF@0.18157,SKNSHRA@0.620701, 0 0 0 0 ENSG00000238206.3 ENST00000412595.3 chr4:39549456-39551432 2 606 1368 intergenic -2.10 0 0,0,0 0 0,0,0 0 8.91081871345029 139.012 0 23.0182748538012 163.648 0 35.3333333333333 187.459 1 1 chimp,human,macaque,marmoset,orangutan, antisense antisense A549@0.054952,AG04450@0.031855,BJ@0,GM12878@0.030441,H1HESC@0.102522,HELAS3@0.0094815,HEPG2@0.0831425,HMEC@0,HSMM@0.00952,HUVEC@0.0397235,K562@0.0108455,MCF7@0.014052,NHEK@0,NHLF@0,SKNSHRA@0.101849, 1 96 0 0 ENSG00000255458.1 ENST00000529094.1 chr4:39640760-39653031 4 474 11791 intergenic 1.09 0 1,1,1 0 0,0,0 0 0 73.564 0 1.98532779238402 112.366 0 2.3157493003138 109.287 0 1 chimp,human,macaque,orangutan, lincRNA lincRNA A549@0.351881,AG04450@0.14424,BJ@0.14585,GM12878@0.232179,H1HESC@0.374182,HELAS3@0.247606,HEPG2@0.237066,HMEC@0.065694,HSMM@0.470521,HUVEC@0.160853,K562@0.08287,MCF7@0.267361,NHEK@0.135482,NHLF@0.265444,SKNSHRA@0.897293, 0 0 0 0 ENSG00000255458.1 ENST00000533736.1 chr4:39640760-39653692 3 1058 11870 intergenic -3.39 0 0,1,0 0 0,0,0 0 0 73.564 0 1.97211457455771 112.366 0 2.30033698399326 109.287 0 1 chimp,human,macaque,orangutan, lincRNA lincRNA A549@0.351881,AG04450@0.14424,BJ@0.14585,GM12878@0.232179,H1HESC@0.374182,HELAS3@0.247606,HEPG2@0.237066,HMEC@0.065694,HSMM@0.470521,HUVEC@0.160853,K562@0.08287,MCF7@0.267361,NHEK@0.135482,NHLF@0.265444,SKNSHRA@0.897293, 0 0 0 0 ENSG00000255458.1 ENST00000532680.1 chr4:39640801-39652934 3 514 11615 intergenic -2.76 0 0,1,0 0 0,0,0 0 0 73.564 0 2.01541110632802 112.366 0 2.35083943176926 109.287 0 0 chimp,cow,human,macaque,orangutan,panda, lincRNA lincRNA A549@0.351881,AG04450@0.14424,BJ@0.14585,GM12878@0.232179,H1HESC@0.374182,HELAS3@0.247606,HEPG2@0.237066,HMEC@0.065694,HSMM@0.470521,HUVEC@0.160853,K562@0.08287,MCF7@0.267361,NHEK@0.135482,NHLF@0.265444,SKNSHRA@0.897293, 0 0 0 0 ENSG00000255458.1 ENST00000526807.1 chr4:39654824-39668264 2 782 12656 intergenic -4.50 0 0,0,1 0 0,0,0 53.1176470588235 10.9896491782554 0 20.6649616368286 9.1314791403287 0 51.7058823529412 11.5734829329962 0 1 1 chimp,human,macaque,marmoset,orangutan, lincRNA lincRNA A549@0.351881,AG04450@0.14424,BJ@0.14585,GM12878@0.232179,H1HESC@0.374182,HELAS3@0.247606,HEPG2@0.237066,HMEC@0.065694,HSMM@0.470521,HUVEC@0.160853,K562@0.08287,MCF7@0.267361,NHEK@0.135482,NHLF@0.265444,SKNSHRA@0.897293, 0 0 0 0 ENSG00000255458.1 ENST00000529314.1 chr4:39655027-39668188 3 625 12532 intergenic -4.50 0 0,0,0 0 0,0,0 27.3056 11.0983881263964 0 25.856 9.22183210979891 0 64.6944 11.6879987232684 0 1 1 chimp,human,macaque,marmoset,orangutan, lincRNA lincRNA A549@0.351881,AG04450@0.14424,BJ@0.14585,GM12878@0.232179,H1HESC@0.374182,HELAS3@0.247606,HEPG2@0.237066,HMEC@0.065694,HSMM@0.470521,HUVEC@0.160853,K562@0.08287,MCF7@0.267361,NHEK@0.135482,NHLF@0.265444,SKNSHRA@0.897293, 0 0 0 0 ENSG00000250338.1 ENST00000515422.1 chr4:40267092-40268077 2 551 432 intergenic -6.84 0 0,0,0 0 0,0,0 0 0 0 0 0 3.951 0 0 7.15 0 0 chimp,human,macaque,marmoset,orangutan,panda, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0.0072905,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0.0905125, 0 0 0 0 ENSG00000249241.1 ENST00000510551.1 chr4:40318502-40332436 3 954 12976 intergenic 2.22 1 1,1,1 0 0,0,0 0 2.89966091245376 21.648 7.83123689727463 5.16807953144266 64.617 11.8165618448637 6.14765721331689 70.218 0 1 chimp,human,macaque,orangutan, lincRNA lincRNA A549@0.0615185,AG04450@0.0245865,BJ@0.054104,GM12878@0.36049,H1HESC@0.009316,HELAS3@0.057477,HEPG2@0,HMEC@0.103112,HSMM@0,HUVEC@0.0062195,K562@0,MCF7@0,NHEK@0.0407647,NHLF@0,SKNSHRA@0.09968, 0 0 0 0 ENSG00000250893.1 ENST00000514187.1 chr4:40428136-40429602 2 860 604 exonic 0.48 0 0,0,0 0 0,0,0 13.0604651162791 0 195.039 12.1883720930233 0 280.446 14.8546511627907 0 285.284 0 0 chimp,horse,human,macaque,marmoset,orangutan,panda, antisense antisense A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0.010096,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000250906.1 ENST00000513127.1 chr4:40814796-40828168 2 475 12895 exonic 0 0 0,1,0 0 0,0,0 86.2 29.8566886390074 5.456 140.343157894737 53.8396277626987 32.765 143.402105263158 54.8801085692129 44.57 0 0 cat,chimp,cow,dog,elephant,guinea_pig,horse,human,macaque,marmoset,orangutan,panda,rabbit, antisense antisense A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0.0207505,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0.0084295,NHEK@0,NHLF@0,SKNSHRA@0.014294, 0 0 0 0 ENSG00000251173.1 ENST00000507190.1 chr4:41222091-41258744 3 589 36060 exonic -1.33 0 0,0,1 0 0,0,0 47.2410865874363 7.95657237936772 86.541 27.9779286926995 8.14553521907931 175.903 23.6859083191851 11.4335551858014 168.734 0 0 chimp,cow,dog,elephant,horse,human,macaque,marmoset,mouse,orangutan, antisense antisense A549@0.033289,AG04450@0.0071495,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0.0176695, 0 0 0 0 ENSG00000251173.1 ENST00000510073.1 chr4:41255900-41258738 2 449 2387 exonic -2.68 0 0,0,0 0 0,0,0 58.4298440979955 0 88.131 34.7461024498886 8.52785923753666 174.58 29.4276169265033 9.37075827398408 166.751 0 0 chimp,human,macaque,marmoset,mouse,orangutan, antisense antisense A549@0.033289,AG04450@0.0071495,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0.0176695, 0 0 0 0 ENSG00000249216.1 ENST00000506475.1 chr4:41690875-41694814 3 432 3503 intronic 0.23 0 0,0,0 0 0,0,0 0 9.74964316300314 0 0 26.3362831858407 7.665 0 30.248073080217 7.623 0 0 chimp,cow,elephant,guinea_pig,human,macaque,marmoset,orangutan, antisense antisense A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0.0909815,HEPG2@0.144226,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000250467.1 ENST00000508038.1 chr4:41750310-41826136 5 902 74916 exonic -3.38 1 0,0,0 0 0,0,0 207.934589800443 37.0891665331838 259.756 280.256097560976 63.2816087351167 348.156 292.39689578714 62.645522985744 359.996 0 0 chimp,cow,elephant,horse,human,macaque,marmoset,orangutan,panda, antisense antisense A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0.0038535,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0.0624545, 0 0 0 0 ENSG00000249122.1 ENST00000510602.1 chr4:41752362-41759358 3 558 6434 intergenic 2.71 0 0,0,0 0 0,0,0 52.7455197132617 97.0104134286602 247.448 12.3727598566308 149.207957724588 331.168 11.258064516129 140.507149518185 318.146 0 0 cat,chimp,cow,elephant,horse,human,macaque,marmoset,orangutan,panda,pig,rabbit, antisense antisense A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0.014587,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0.072376, 0 0 0 0 ENSG00000245870.2 ENST00000504870.1 chr4:41878498-41884628 2 630 5498 intergenic -4.43 0 0,0,0 0 0,0,0 14.1666666666667 87.6635140050928 66.895 140.32380952381 147.489268825027 234.48 159.011111111111 143.204437977446 249.01 0 0 chimp,guinea_pig,human,macaque,marmoset,orangutan,pig, lincRNA processed_transcript A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0.0755815,HEPG2@0.0157675,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0.271992, 0 0 0 0 ENSG00000245870.2 ENST00000499082.2 chr4:41881538-41884587 2 1382 1665 intergenic 1.98 1 0,0,0 0 0,0,0 85.5499276410999 73.6 76.245 164.270622286541 110.711711711712 265.148 170.404486251809 118.61981981982 281.482 0 0 cat,chimp,cow,horse,human,macaque,marmoset,orangutan,panda,pig, lincRNA processed_transcript A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0.0755815,HEPG2@0.0157675,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0.271992, 0 0 0 0 ENSG00000245870.2 ENST00000498940.1 chr4:41881564-41883860 2 1623 671 intergenic 1.98 1 0,1,0 0 0,0,0 70.969808995687 164.736214605067 63.652 115.744916820702 198.199701937407 275.488 112.928527418361 225.487332339791 294.786 0 0 cat,chimp,cow,horse,human,marmoset,orangutan,panda,pig, lincRNA processed_transcript A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0.0755815,HEPG2@0.0157675,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0.271992, 0 0 0 0 ENSG00000249771.1 ENST00000510772.1 chr4:41885077-41896596 3 822 10693 intergenic 3.45 1 0,0,1 0 0,0,0 0 26.9164874216777 0 0 27.0439539885907 0 0 27.1445805667259 0 1 1 chimp,human,macaque,marmoset,orangutan, lincRNA lincRNA A549@0.002631,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0.002833,HEPG2@0.0330635,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0.009496, 0 0 0 0 ENSG00000250781.1 ENST00000503321.1 chr4:42283847-42393250 3 595 108804 intergenic -0.55 0 0,1,0 0 0,0,0 21.4453781512605 8.9098011102533 354.672 43.9529411764706 16.4813517885372 545.613 47.4319327731092 16.8231039300026 542.273 0 0 chimp,cow,elephant,guinea_pig,horse,human,macaque,marmoset,orangutan, antisense antisense A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0.008478,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0.0079565, 0 0 0 0 ENSG00000250781.1 ENST00000508911.1 chr4:42301029-42393285 2 392 91862 intergenic -15.32 0 0,1,0 0 0,0,0 48.9336734693878 10.0131719318108 128.027 72.3035714285714 18.7096187759901 145.068 72.3035714285714 19.189120637478 135.356 0 0 cat,chimp,cow,elephant,guinea_pig,horse,human,macaque,marmoset,orangutan,rabbit,rat, antisense antisense A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0.008478,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0.0079565, 0 0 0 0 ENSG00000250781.1 ENST00000515392.1 chr4:42354521-42393276 2 476 38277 intergenic 2.99 0 0,1,0 0 0,0,0 31.922268907563 12.8853619667163 132.014 50.2794117647059 18.3131123128772 149.478 50.7899159663866 18.3206102881626 139.523 0 0 cow,horse,human,marmoset,panda, antisense antisense A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0.008478,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0.0079565, 0 0 0 0 ENSG00000251517.1 ENST00000511279.1 chr4:42708124-42709352 2 1126 100 intergenic -5.64 1 0,1,1 0 0,0,0 0 0 0 2.94138543516874 27.06 0 3.02664298401421 27.32 1.944 0 0 cat,chimp,dog,elephant,horse,human,macaque,marmoset,orangutan,panda,rabbit, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0.0124385,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0.0036455,NHEK@0,NHLF@0,SKNSHRA@0.017013, 0 0 0 0 ENSG00000248939.1 ENST00000505575.1 chr4:43135884-43236973 5 601 100480 intergenic 0.48 0 0,0,0 0 0,0,0 0 2.09404856687898 0 0 4.50442874203822 0 0 5.92154657643312 0 1 1 chimp,human,macaque,marmoset,orangutan, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000250657.1 ENST00000507388.1 chr4:43342892-43347617 5 648 4069 intergenic 0.27 1 0,0,0 0 0,0,0 27.3518518518519 0 0 109.916666666667 1.56598672892603 0 110.882716049383 1.63209633816663 0 0 1 chimp,human,macaque,orangutan, lincRNA lincRNA A549@0,AG04450@0.215542,BJ@0.0185295,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0.0047345,HMEC@0.15319,HSMM@0.0334385,HUVEC@0,K562@0,MCF7@0,NHEK@0.0712997,NHLF@0.123303,SKNSHRA@0.0104355, 0 0 0 0 ENSG00000250657.1 ENST00000508352.1 chr4:43344814-43347615 2 448 2351 intergenic 2.22 1 0,0,0 0 0,0,0 37.6785714285714 0 0 156.071428571429 2.71033602722246 0 157.584821428571 2.82475542322416 0 0 0 chimp,human,macaque,rat, lincRNA retained_intron A549@0,AG04450@0.215542,BJ@0.0185295,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0.0047345,HMEC@0.15319,HSMM@0.0334385,HUVEC@0,K562@0,MCF7@0,NHEK@0.0712997,NHLF@0.123303,SKNSHRA@0.0104355, 0 0 0 0 ENSG00000248143.1 ENST00000508563.1 chr4:43459544-43494560 3 579 34433 intergenic 0 0 0,1,0 0 0,0,0 0 0 0 0 0.0792263235849331 2.94 0 0.0827403943891035 3 0 1 chimp,human,macaque,orangutan, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0.0078105, 0 0 0 0 ENSG00000250863.1 ENST00000509098.1 chr4:43982023-43983637 2 447 1165 intergenic -0.61 0 0,0,1 0 0,0,0 0 0 0 18.8590604026846 30.4858369098712 0 22.7002237136465 35.3545064377682 2.916 0 0 cat,chimp,cow,dog,elephant,guinea_pig,horse,human,macaque,marmoset,orangutan,panda,pig,rabbit, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0.113543,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000251350.1 ENST00000507639.1 chr4:44018878-44022273 2 706 2687 intergenic -0.10 0 0,0,1 0 0,0,0 0 0 0 0 1.68998883513212 0 0 10.1030889467808 0 0 1 chimp,human,macaque,orangutan, lincRNA processed_transcript A549@0.0097625,AG04450@0.007257,BJ@0.0024685,GM12878@0.011209,H1HESC@0,HELAS3@0.020168,HEPG2@0.075736,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0.0037065,NHEK@0,NHLF@0.015439,SKNSHRA@0.004328, 0 0 0 0 ENSG00000251350.1 ENST00000512678.1 chr4:44019079-44024080 2 2620 2379 intergenic -2.53 1 0,0,0 0 0,0,0 0 0 0 0 1.90878520386717 0 0 11.4110970996217 0 0 1 chimp,human,marmoset,orangutan, lincRNA processed_transcript A549@0.0097625,AG04450@0.007257,BJ@0.0024685,GM12878@0.011209,H1HESC@0,HELAS3@0.020168,HEPG2@0.075736,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0.0037065,NHEK@0,NHLF@0.015439,SKNSHRA@0.004328, 0 0 0 0 ENSG00000248744.1 ENST00000515623.1 chr4:45011557-45053669 6 666 41436 intergenic 0.07 0 0,0,0 0 0,0,0 0 3.46874698329955 0 0 6.53607973742639 0 4.14564564564565 9.68899025002413 0 0 0 chimp,elephant,horse,human,macaque,marmoset,orangutan,pig, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000249330.1 ENST00000502455.1 chr4:46392272-46435205 3 546 42383 exonic 0 0 0,0,0 0 0,0,0 87.8241758241758 7.57898213906519 0 88.0860805860806 9.10414553004742 90.939 71.4157509157509 9.54094802161244 98.774 0 0 chimp,cow,elephant,guinea_pig,horse,human,macaque,marmoset,mouse,orangutan,panda,pig,rabbit,rat, antisense antisense A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000248254.1 ENST00000508081.1 chr4:47558748-47562276 3 598 2926 exonic -6.41 0 0,0,0 0 0,0,0 0 0 41.664 62.0267558528428 40.1948051948052 66.154 77.3244147157191 44.0235816814764 71.74 0 0 cat,chimp,cow,dog,elephant,guinea_pig,horse,human,macaque,marmoset,orangutan,panda,pig,rabbit,rat, antisense antisense A549@0,AG04450@0,BJ@0.008053,GM12878@0.0067085,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000248256.1 ENST00000513576.1 chr4:48854025-48862220 2 263 7930 exonic -4.35 0 0,0,0 0 0,0,0 212.532319391635 18.9138713745271 44.71 120.923954372624 29.9931904161412 106.363 123.174904942966 25.4020176544767 100.763 0 0 cat,chimp,cow,dog,elephant,guinea_pig,horse,human,macaque,marmoset,orangutan,panda,pig,rabbit,rat, antisense antisense A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000251040.1 ENST00000511875.1 chr4:52910971-52913120 3 609 1536 intergenic -4.57 0 0,1,0 0 0,0,0 0 0 0 0 3.25325520833333 5.969 0 3.27799479166667 8.464 0 0 cat,chimp,cow,dog,elephant,horse,human,macaque,marmoset,orangutan,panda, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000248866.1 ENST00000503051.1 chr4:53525573-53527835 2 1046 1214 intergenic 3.80 0 0,1,0 1 0,0,0 1.23135755258126 0 51.52 167.002868068834 5.13097199341021 189.276 105.389101338432 5.57413509060956 131.588 0 0 cat,chimp,dog,horse,human,macaque,marmoset,orangutan, antisense antisense A549@0.533743,AG04450@1.71717,BJ@0.743076,GM12878@0.768564,H1HESC@0.565661,HELAS3@0.823008,HEPG2@0.192222,HMEC@1.57391,HSMM@0.961496,HUVEC@0.572347,K562@1.24134,MCF7@1.08513,NHEK@0.888441,NHLF@2.24996,SKNSHRA@1.01825, 0 0 0 0 ENSG00000226950.2 ENST00000411630.2 chr4:53578597-53580304 3 875 828 intergenic -1.70 0 1,1,1 1 0,0,0 0 50.7053140096618 0 1.17485714285714 110.995169082126 0 1.21028571428571 111.611111111111 1.944 0 0 chimp,human,macaque,orangutan, lincRNA processed_transcript A549@16.6214,AG04450@25.2289,BJ@17.064,GM12878@51.4644,H1HESC@284.282,HELAS3@61.3707,HEPG2@75.0683,HMEC@34.8258,HSMM@18.1615,HUVEC@71.4087,K562@81.8844,MCF7@29.4969,NHEK@22.4447,NHLF@12.5325,SKNSHRA@14.0708, 0 0 0 0 ENSG00000226950.2 ENST00000441504.1 chr4:53578665-53579296 2 334 295 intergenic 0 0 1,1,1 1 0,0,0 0 0 0 4.65269461077844 177.162711864407 0 4.79940119760479 176.528813559322 1.944 0 0 chimp,elephant,guinea_pig,horse,human,orangutan, lincRNA retained_intron A549@16.6214,AG04450@25.2289,BJ@17.064,GM12878@51.4644,H1HESC@284.282,HELAS3@61.3707,HEPG2@75.0683,HMEC@34.8258,HSMM@18.1615,HUVEC@71.4087,K562@81.8844,MCF7@29.4969,NHEK@22.4447,NHLF@12.5325,SKNSHRA@14.0708, 0 0 0 0 ENSG00000226950.2 ENST00000425653.1 chr4:53578948-53580304 2 821 533 intergenic -1.70 0 1,1,1 1 0,0,0 0 78.7692307692308 0 6.45432399512789 74.3733583489681 48.231 6.66991473812424 75.6810506566604 49.846 0 1 chimp,human,macaque,orangutan, lincRNA retained_intron A549@16.6214,AG04450@25.2289,BJ@17.064,GM12878@51.4644,H1HESC@284.282,HELAS3@61.3707,HEPG2@75.0683,HMEC@34.8258,HSMM@18.1615,HUVEC@71.4087,K562@81.8844,MCF7@29.4969,NHEK@22.4447,NHLF@12.5325,SKNSHRA@14.0708, 0 0 0 0 ENSG00000226950.2 ENST00000444958.1 chr4:53578991-53586518 4 705 6816 intergenic -1.06 0 0,1,1 1 0,0,0 0 6.15962441314554 0 4.84822695035461 6.88541666666667 52.263 17.2808510638298 7.0193661971831 54.02 0 0 cat,chimp,dog,elephant,guinea_pig,horse,human,macaque,marmoset,opossum,orangutan,panda, lincRNA processed_transcript A549@16.6214,AG04450@25.2289,BJ@17.064,GM12878@51.4644,H1HESC@284.282,HELAS3@61.3707,HEPG2@75.0683,HMEC@34.8258,HSMM@18.1615,HUVEC@71.4087,K562@81.8844,MCF7@29.4969,NHEK@22.4447,NHLF@12.5325,SKNSHRA@14.0708, 0 0 0 0 ENSG00000226887.3 ENST00000454756.2 chr4:53588785-53617753 3 508 28456 intergenic 0 0 0,1,1 1 0,0,1 0 6.55924936744448 0 0 3.09906522350295 2.893 0 4.48875456845656 2.992 0 0 chimp,elephant,guinea_pig,human,macaque,marmoset,orangutan, lincRNA lincRNA A549@0.141294,AG04450@0.0761795,BJ@0.0227655,GM12878@0,H1HESC@7.53315,HELAS3@0.024521,HEPG2@0.0163925,HMEC@7.00323,HSMM@0.00619,HUVEC@0.020595,K562@0.116845,MCF7@0.673949,NHEK@1.5405,NHLF@0.078442,SKNSHRA@0.1682, 0 0 0 0 ENSG00000226887.3 ENST00000443173.1 chr4:53608719-53617807 3 3827 5257 intergenic 7.32 0 0,1,1 1 0,0,1 36.4065847922655 0 0 2.60203814998693 9.94217234163972 2.893 3.70864907238045 10.1563629446452 2.992 0 0 chimp,human,macaque,marmoset,orangutan, lincRNA lincRNA A549@0.141294,AG04450@0.0761795,BJ@0.0227655,GM12878@0,H1HESC@7.53315,HELAS3@0.024521,HEPG2@0.0163925,HMEC@7.00323,HSMM@0.00619,HUVEC@0.020595,K562@0.116845,MCF7@0.673949,NHEK@1.5405,NHLF@0.078442,SKNSHRA@0.1682, 0 0 0 0 ENSG00000226887.3 ENST00000440542.1 chr4:53609684-53617566 4 2740 5136 intergenic 7.32 1 1,1,1 1 0,0,1 50.8496350364964 0 0 3.63430656934307 10.1764018691589 2.893 5.17992700729927 10.3956386292835 2.992 0 0 cat,chimp,human,macaque,marmoset,orangutan, lincRNA lincRNA A549@0.141294,AG04450@0.0761795,BJ@0.0227655,GM12878@0,H1HESC@7.53315,HELAS3@0.024521,HEPG2@0.0163925,HMEC@7.00323,HSMM@0.00619,HUVEC@0.020595,K562@0.116845,MCF7@0.673949,NHEK@1.5405,NHLF@0.078442,SKNSHRA@0.1682, 0 0 0 0 ENSG00000226887.3 ENST00000540758.1 chr4:53609751-53611888 1 2137 0 intergenic 7.32 1 0,0,1 0 0,0,1 65.1979410388395 0 0 4.65980346279832 0 31.464 6.64155357978474 0 31.692 0 0 cat,chimp,human,macaque,marmoset,orangutan,panda, lincRNA lincRNA A549@0.141294,AG04450@0.0761795,BJ@0.0227655,GM12878@0,H1HESC@7.53315,HELAS3@0.024521,HEPG2@0.0163925,HMEC@7.00323,HSMM@0.00619,HUVEC@0.020595,K562@0.116845,MCF7@0.673949,NHEK@1.5405,NHLF@0.078442,SKNSHRA@0.1682, 0 0 0 0 ENSG00000250302.1 ENST00000514957.1 chr4:53656161-53681631 5 722 24740 intergenic 0.74 1 0,0,1 0 0,0,0 0 0 0 0 0.18965238480194 0 0 0.997170573969281 0 0 0 cat,chimp,human,marmoset,orangutan, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0.020113,H1HESC@0.023325,HELAS3@0.0096445,HEPG2@0.0149635,HMEC@0,HSMM@0,HUVEC@0,K562@0.0771295,MCF7@0,NHEK@0.0107077,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000248115.1 ENST00000510351.1 chr4:53811816-53817189 3 2514 2855 intronic 5.11 1 0,0,0 0 0,0,0 3.57796340493238 3.78073555166375 0 8.39936356404137 16.3285464098074 0 8.87828162291169 19.0497373029772 0 0 0 chimp,horse,human,macaque,orangutan, antisense antisense A549@0,AG04450@0.001201,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0.007245,HUVEC@0.023507,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0.04101, 0 0 0 0 ENSG00000248115.1 ENST00000504048.1 chr4:53811833-53814919 2 566 2518 intronic 1.48 0 0,0,0 0 0,0,0 0 0 0 0 9.20492454328832 0 0 12.1195393169182 0 0 0 cat,chimp,cow,elephant,horse,human,macaque,marmoset,orangutan,panda,pig, antisense antisense A549@0,AG04450@0.001201,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0.007245,HUVEC@0.023507,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0.04101, 0 0 0 0 ENSG00000248115.1 ENST00000508813.1 chr4:53811856-53824254 3 2462 9932 intronic 3.52 0 0,0,0 0 0,0,0 8.04224207961007 2.01832460732984 0 19.1823720552396 9.91039065646395 0 19.8541835905768 10.3922674184454 0 0 0 chimp,cow,elephant,guinea_pig,horse,human,macaque,orangutan,pig, antisense antisense A549@0,AG04450@0.001201,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0.007245,HUVEC@0.023507,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0.04101, 0 0 0 0 ENSG00000250930.1 ENST00000502373.1 chr4:54362567-54366669 2 284 3816 intronic 0 0 0,1,0 0 0,0,0 0 17.7182914046122 29.397 4.74295774647887 41.2659853249476 104.669 5.38732394366197 40.5138888888889 136.833 0 0 cat,chimp,cow,guinea_pig,horse,human,macaque,marmoset,orangutan,panda, antisense antisense A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000250930.1 ENST00000510785.1 chr4:54366245-54389441 4 546 22644 intronic -2.42 0 0,0,0 0 0,0,0 0 0.359962904080551 0 2.94871794871795 12.6139816286875 0 5.6978021978022 13.423909203321 0 0 0 chimp,horse,human,macaque,marmoset,panda, antisense antisense A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000250930.1 ENST00000511989.1 chr4:54368031-54415745 3 485 47225 intronic 4.84 1 0,0,0 0 0,0,0 0 1.42676548438327 0 3.31958762886598 11.4121757543674 1.912 3.50721649484536 11.8517946003176 2.008 0 0 cat,chimp,cow,dog,elephant,horse,human,macaque,marmoset,orangutan,panda, antisense antisense A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000250930.1 ENST00000514364.1 chr4:54368058-54405515 3 492 36961 intronic 3.60 1 0,0,1 0 0,0,0 0 0.665539352290252 0 0 11.1652011579773 1.61 0 11.7988690782176 1.701 0 0 chimp,guinea_pig,human,macaque,marmoset,orangutan,pig,rat, antisense antisense A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000248494.1 ENST00000509974.1 chr4:54459123-54470214 2 626 10463 intronic 4.33 0 0,1,0 0 0,0,0 0 0 0 0 5.89305170601166 29.03 0 6.2121762400841 34.25 1 1 chimp,human,macaque,marmoset,orangutan, sense_intronic sense_intronic A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0.122409,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0.054454,NHEK@0.00230933,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000248494.1 ENST00000502410.1 chr4:54459152-54460270 2 345 771 intronic -8.56 1 0,1,0 0 0,0,0 0 0 0 0 0 29.03 0 0 34.25 0 0 cat,chimp,cow,horse,human,macaque,orangutan,panda,pig, sense_intronic sense_intronic A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0.122409,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0.054454,NHEK@0.00230933,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000249341.1 ENST00000508112.1 chr4:54525375-54603323 4 1590 76352 intronic 6.24 0 0,1,0 0 0,0,0 0 1.61412929589271 0 17.6993710691824 269.509980092205 0 20.0132075471698 279.48650984912 0 0 0 chimp,cow,dog,guinea_pig,horse,human,macaque,marmoset,orangutan,panda, sense_intronic sense_intronic A549@0,AG04450@0.016902,BJ@0,GM12878@0.363621,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0.001181,K562@0,MCF7@0,NHEK@0,NHLF@0.0028345,SKNSHRA@0.0018475, 0 0 0 0 ENSG00000249341.1 ENST00000506950.1 chr4:54562068-54600525 3 1613 36840 exonic 4.36 0 0,1,0 0 0,0,0 0 1.77741585233442 0 0.74085554866708 7.26514657980456 0 0.753254804711717 9.7979098805646 0 0 0 chimp,cow,elephant,human,macaque,marmoset,orangutan, sense_intronic sense_intronic A549@0,AG04450@0.016902,BJ@0,GM12878@0.363621,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0.001181,K562@0,MCF7@0,NHEK@0,NHLF@0.0028345,SKNSHRA@0.0018475, 0 0 0 0 ENSG00000249706.1 ENST00000512405.1 chr4:54766038-54783002 3 832 16128 intronic -0.46 0 0,0,0 0 0,0,0 0 1.69525049603175 0 0 9.47705853174603 9.086 0 12.2349330357143 10.219 0 0 chimp,dog,horse,human,macaque,marmoset,orangutan, sense_intronic sense_intronic A549@0,AG04450@0.042083,BJ@0.017141,GM12878@0.0039395,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0.00455733,NHLF@0.0358775,SKNSHRA@0.145803, 0 0 0 0 ENSG00000248184.1 ENST00000511634.1 chr4:55199059-55222121 2 472 22588 intergenic 3.75 0 0,0,0 0 0,0,0 0 0.331149282805029 0 165.622881355932 7.56667256950593 51.85 178.114406779661 8.12705861519391 51.208 0 0 cat,chimp,cow,dog,elephant,guinea_pig,horse,human,macaque,marmoset,mouse,opossum,orangutan,panda,rabbit,rat, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000248518.1 ENST00000508241.1 chr4:55242169-55242919 2 538 210 intergenic -5.74 0 0,0,0 0 0,0,0 0 0 0 8.88475836431227 0 0 9.33085501858736 0 0 0 0 chimp,guinea_pig,human,macaque,marmoset,orangutan, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000251264.1 ENST00000512628.1 chr4:55306669-55312890 4 620 5595 intergenic 1.25 0 0,0,0 0 0,0,0 120.312903225806 43.0173369079535 0 290.216129032258 63.0341376228776 14.276 267.709677419355 57.8975871313673 11.136 0 0 cat,chimp,cow,dog,elephant,horse,human,macaque,marmoset,mouse,opossum,orangutan,panda,pig,rabbit, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0.0061845,SKNSHRA@0, 0 0 0 0 ENSG00000250456.1 ENST00000508484.1 chr4:55469378-55473298 2 2214 1704 intergenic 2.80 1 0,0,0 0 0,0,0 2.19421860885276 30.0457746478873 46.498 8.04878048780488 15.2734741784038 61.192 7.88482384823848 15.7318075117371 60.769 0 1 chimp,human,macaque,marmoset, lincRNA lincRNA A549@0,AG04450@0,BJ@0.024599,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000249727.1 ENST00000512898.1 chr4:55702327-55711568 2 730 8509 intergenic 9.72 0 0,0,0 0 0,0,0 0 4.92196497825831 0 0 28.2886355623458 0 0 30.495005288518 0 0 0 chimp,horse,human,macaque,marmoset,orangutan, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000251256.1 ENST00000514413.1 chr4:55711734-55725407 2 463 13208 intergenic -0.77 0 0,0,0 0 0,0,0 0 2.76680799515445 0 0 15.890142337977 0 0 18.3192004845548 0 0 0 chimp,dog,horse,human,macaque,marmoset,orangutan,panda,pig, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000248317.1 ENST00000509711.1 chr4:55809796-55822985 3 419 12766 intergenic -2.56 0 0,0,0 0 0,0,0 0 5.19661601127996 0 7.30310262529833 7.28035406548645 3.224 8.22195704057279 8.29844900516998 3.263 0 0 cat,chimp,cow,dog,guinea_pig,horse,human,macaque,marmoset,mouse,orangutan,panda, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0.007052,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000250646.1 ENST00000511222.1 chr4:55919227-55958701 4 451 39017 intronic -1.25 0 0,0,0 0 0,0,0 15.3680709534368 17.1870210421099 0 12.5321507760532 40.110592818515 1.912 21.2749445676275 41.2205448906887 2.008 0 0 chimp,cow,dog,elephant,guinea_pig,horse,human,macaque,marmoset,orangutan,panda,pig, processed_transcript processed_transcript A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000249700.1 ENST00000433175.2 chr4:56230138-56249563 5 1612 17805 exonic 0.63 1 0,0,0 0 0,0,0 0 2.32833473743331 0 26.9100496277916 10.3511934849761 0 31.6941687344913 11.0390901432182 0 1 1 chimp,human,macaque,marmoset,orangutan, antisense antisense A549@0.005327,AG04450@0.0380205,BJ@0.070082,GM12878@0.007594,H1HESC@0.0062855,HELAS3@0.0327315,HEPG2@0.014049,HMEC@0.008844,HSMM@0.030804,HUVEC@0.022182,K562@0.0154795,MCF7@0.0085595,NHEK@0.016752,NHLF@0.0377405,SKNSHRA@0.026973, 0 0 0 0 ENSG00000249700.1 ENST00000510637.1 chr4:56232768-56251747 4 922 18051 intronic 0.63 0 0,0,1 0 0,0,0 0 2.29660406625672 0 0 10.2101268627777 6.065 0 10.8886488283198 6.235 0 0 cat,chimp,dog,human,macaque,marmoset,orangutan,panda,pig, antisense antisense A549@0.005327,AG04450@0.0380205,BJ@0.070082,GM12878@0.007594,H1HESC@0.0062855,HELAS3@0.0327315,HEPG2@0.014049,HMEC@0.008844,HSMM@0.030804,HUVEC@0.022182,K562@0.0154795,MCF7@0.0085595,NHEK@0.016752,NHLF@0.0377405,SKNSHRA@0.026973, 0 0 0 0 ENSG00000250821.1 ENST00000504250.1 chr4:56686169-56703548 3 551 16824 intergenic -2.87 0 0,1,0 0 0,0,0 470.969147005445 11.0899904897765 58.125 531.582577132486 8.49227294341417 80.647 526.760435571688 9.55301949595816 87.588 0 0 cat,chimp,cow,dog,elephant,guinea_pig,horse,human,macaque,marmoset,mouse,opossum,orangutan,panda,pig,platypus,rabbit,rat, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0.0246335,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0.341538,MCF7@0,NHEK@0,NHLF@0.003483,SKNSHRA@0.170803, 0 0 0 0 ENSG00000223357.2 ENST00000416157.2 chr4:57276808-57289623 4 4267 8542 intronic -1.00 0 0,0,0 0 0,1,0 36.7201781110851 3.04191055958792 155.118 49.877197093977 2.56040739873566 183.578 58.7258026716663 4.0656754858347 182.456 1 1 chimp,human,macaque,marmoset,orangutan, lincRNA lincRNA A549@0.001663,AG04450@0.0230425,BJ@0.0191675,GM12878@0,H1HESC@0,HELAS3@0.006606,HEPG2@0,HMEC@0.035327,HSMM@0.0065225,HUVEC@0.0279405,K562@0,MCF7@0.0328105,NHEK@0.00214033,NHLF@0.0158475,SKNSHRA@0.082168, 0 0 0 0 ENSG00000249693.1 ENST00000512175.1 chr4:57396775-57450744 6 1004 52955 intergenic -0.50 0 0,1,0 0 0,0,0 28.7021912350598 1.71728826362006 0 84.5408366533864 3.09243697478992 0 81.7918326693227 9.12404872061184 1.088 0 0 cow,dog,horse,human,macaque,marmoset,orangutan,panda,pig, processed_transcript processed_transcript A549@0.0946515,AG04450@0.10113,BJ@0.0056415,GM12878@0.004166,H1HESC@0.0765715,HELAS3@0.0764685,HEPG2@0.0034325,HMEC@0,HSMM@0.052929,HUVEC@0.0451625,K562@0.277696,MCF7@0.140151,NHEK@0.025006,NHLF@0.0674795,SKNSHRA@0.876811, 0 0 0 0 ENSG00000249693.1 ENST00000510716.1 chr4:57423882-57462711 5 566 38255 intergenic -9.88 0 0,0,0 0 0,0,0 0 1.60133315906417 0 105.072438162544 11.4396810874396 0 99.8303886925795 70.2113449222324 0 0 0 chimp,cow,dog,elephant,guinea_pig,horse,human,marmoset,mouse,opossum,orangutan,panda,pig,rabbit,rat, processed_transcript processed_transcript A549@0.0946515,AG04450@0.10113,BJ@0.0056415,GM12878@0.004166,H1HESC@0.0765715,HELAS3@0.0764685,HEPG2@0.0034325,HMEC@0,HSMM@0.052929,HUVEC@0.0451625,K562@0.277696,MCF7@0.140151,NHEK@0.025006,NHLF@0.0674795,SKNSHRA@0.876811, 0 0 0 0 ENSG00000249693.1 ENST00000509275.1 chr4:57441668-57467143 4 428 25041 intergenic 0 0 0,0,0 0 0,0,0 0 0.208657801206022 10.78 156.130841121495 14.3933948324747 12.96 147.268691588785 103.064334491434 13.872 0 0 chimp,cow,dog,elephant,guinea_pig,horse,human,macaque,marmoset,mouse,orangutan,panda,pig,rabbit, processed_transcript processed_transcript A549@0.0946515,AG04450@0.10113,BJ@0.0056415,GM12878@0.004166,H1HESC@0.0765715,HELAS3@0.0764685,HEPG2@0.0034325,HMEC@0,HSMM@0.052929,HUVEC@0.0451625,K562@0.277696,MCF7@0.140151,NHEK@0.025006,NHLF@0.0674795,SKNSHRA@0.876811, 0 0 0 0 ENSG00000249693.1 ENST00000514732.1 chr4:57450743-57469422 4 387 18286 intergenic -1.56 0 0,0,0 0 0,0,0 0 0.285737722848081 0 139.736434108527 18.6147325823034 13.226 144.167958656331 125.78754238215 154.294 0 0 cat,chimp,cow,dog,elephant,guinea_pig,horse,human,macaque,marmoset,mouse,orangutan,panda,pig,rat, processed_transcript retained_intron A549@0.0946515,AG04450@0.10113,BJ@0.0056415,GM12878@0.004166,H1HESC@0.0765715,HELAS3@0.0764685,HEPG2@0.0034325,HMEC@0,HSMM@0.052929,HUVEC@0.0451625,K562@0.277696,MCF7@0.140151,NHEK@0.025006,NHLF@0.0674795,SKNSHRA@0.876811, 0 0 0 0 ENSG00000245067.2 ENST00000499667.2 chr4:57975928-58071465 5 1384 94145 exonic 6.60 1 1,1,1 1 0,0,0 127.076589595376 11.959318073185 0 80.878612716763 19.2254713473897 16.577 90.2203757225434 20.4554145201551 17.95 0 0 chimp,cow,dog,elephant,human,macaque,marmoset,orangutan,panda,pig, antisense antisense A549@0.0113985,AG04450@0.0131555,BJ@0.0296925,GM12878@0.0060105,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0.047736,HUVEC@0.0568195,K562@0,MCF7@0,NHEK@0.001751,NHLF@0.0027935,SKNSHRA@0.154095, 0 0 0 0 ENSG00000245067.2 ENST00000508328.1 chr4:57976019-58071676 4 750 94901 exonic 1.99 0 0,1,1 1 0,0,0 114.082666666667 12.8097069577771 0 78.1746666666667 19.6285813637369 16.577 95.908 20.8450490511164 17.95 0 0 chimp,elephant,guinea_pig,horse,human,macaque,marmoset,mouse,opossum,orangutan,panda, antisense antisense A549@0.0113985,AG04450@0.0131555,BJ@0.0296925,GM12878@0.0060105,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0.047736,HUVEC@0.0568195,K562@0,MCF7@0,NHEK@0.001751,NHLF@0.0027935,SKNSHRA@0.154095, 0 0 0 0 ENSG00000250192.1 ENST00000511330.1 chr4:58020743-58022618 3 557 1314 intergenic -0.18 0 0,0,0 0 0,0,0 0 12.3896499238965 45.96 5.78815080789946 11.1818873668189 23.518 6.18491921005386 11.4840182648402 21.875 0 0 chimp,elephant,horse,human,marmoset,orangutan, lincRNA lincRNA A549@0,AG04450@0,BJ@0.003363,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0.0075155,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0.0038385, 0 0 0 0 ENSG00000245067.2 ENST00000515865.1 chr4:58045311-58071676 5 806 25551 intergenic 2.82 0 0,0,1 0 0,0,0 57.7866004962779 25.8614927008728 0 39.3151364764268 27.5386481938085 7.309 38.1488833746898 27.8258776564518 9.268 0 0 chimp,elephant,horse,human,macaque,marmoset,orangutan,panda, antisense antisense A549@0.0113985,AG04450@0.0131555,BJ@0.0296925,GM12878@0.0060105,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0.047736,HUVEC@0.0568195,K562@0,MCF7@0,NHEK@0.001751,NHLF@0.0027935,SKNSHRA@0.154095, 0 0 0 0 ENSG00000248505.1 ENST00000510956.1 chr4:58292038-58332152 6 1032 39072 intergenic 0.11 0 0,0,1 0 0,0,0 0 18.7557585995086 0 5.93798449612403 32.5727631040131 33.817 7.66472868217054 34.6038083538083 41.571 0 0 chimp,dog,elephant,human,macaque,marmoset,orangutan, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0.00122967,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000251459.1 ENST00000511962.1 chr4:58357556-58361399 2 781 3060 intergenic 1.72 0 0,0,0 0 0,0,0 12.3687580025608 0 12.65 0 21.0307189542484 42.732 0 25.2238562091503 71.547 1 1 chimp,human,macaque,marmoset,orangutan, lincRNA lincRNA A549@0.013861,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0.006779,HEPG2@0,HMEC@0,HSMM@0.0052555,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000251049.2 ENST00000509641.2 chr4:58462106-58472038 2 733 9197 intergenic 3.40 0 0,0,0 0 0,0,0 0 19.7332825921496 0 0 24.6046536914211 0 0 29.789931499402 0 0 0 cat,chimp,elephant,horse,human,macaque,marmoset,orangutan, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000250333.1 ENST00000507808.1 chr4:58471860-58524966 3 353 52749 intergenic -4.05 0 0,0,1 0 0,0,0 0 14.0407590665226 0 0 27.0010237160894 0 0 28.2639291740128 0 1 1 chimp,human,macaque,marmoset,orangutan, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000249831.2 ENST00000508135.2 chr4:58586201-58590821 2 2670 1948 intergenic -3.33 0 0,0,1 0 0,0,0 0 0 0 5.95767790262172 1.47227926078029 3.468 5.56479400749064 1.63244353182752 3.6 0 0 chimp,horse,human,macaque,marmoset,orangutan,panda, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0.0007525,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000250340.1 ENST00000509824.1 chr4:59390680-59402493 3 424 11385 intergenic -2.41 1 0,1,0 0 0,0,0 0 0 0 0 4.47878787878788 0 0 5.70654369784805 0 1 1 chimp,human,macaque,marmoset,orangutan, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000250078.1 ENST00000508292.1 chr4:59428330-59431287 3 417 2536 intergenic -1.77 1 0,0,0 0 0,0,0 0 4.07728706624606 0 0 11.3312302839117 0 0 16.0236593059937 0 0 0 chimp,human,macaque,marmoset,orangutan,panda, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000251339.1 ENST00000513551.1 chr4:59646791-59849859 5 1056 202004 intergenic -0.33 0 0,0,0 0 0,0,0 0 1.5502267281836 0 0 4.59580008316667 0 0 6.31525613354191 0 0 0 cat,chimp,cow,dog,elephant,horse,human,macaque,marmoset,orangutan,pig, lincRNA lincRNA A549@0.201362,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000251339.1 ENST00000510941.1 chr4:59713333-59849820 4 500 135981 intergenic -0.39 1 0,0,0 0 0,0,0 0 2.04414587332054 0 0 5.63900839087814 0 0 7.8985593575573 0 0 0 chimp,dog,horse,human,macaque,marmoset,orangutan,pig, lincRNA lincRNA A549@0.201362,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000251339.1 ENST00000510371.1 chr4:59717135-59849870 3 465 132266 intergenic -7.17 0 0,0,0 0 0,0,0 0 2.10156049173635 0 0 5.79739313202184 0 0 8.1204088730286 0 0 0 chimp,cow,dog,horse,human,macaque,marmoset,orangutan,pig, lincRNA lincRNA A549@0.201362,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000251339.1 ENST00000503232.1 chr4:59726676-59842815 3 264 115871 intergenic -2.92 0 0,0,1 0 0,0,0 0 2.03744681585556 0 0 5.2456697534327 0 0 7.75357941158703 0 1 1 chimp,human,macaque,marmoset,orangutan, lincRNA lincRNA A549@0.201362,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000251266.1 ENST00000513836.1 chr4:59850000-59912675 3 691 61980 intergenic -2.52 1 0,0,0 0 0,0,0 0 2.70201677960632 0 0 2.80882542755728 0 0 3.21242336237496 2.673 0 0 chimp,dog,horse,human,macaque,marmoset,orangutan,pig, lincRNA lincRNA A549@0.0140445,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000249382.1 ENST00000512911.1 chr4:59852905-59853836 3 650 277 intergenic 0 1 0,0,1 0 0,0,0 0 0 0 0 0 0 0 0 0 0 1 chimp,human,macaque,orangutan, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000249382.1 ENST00000514707.1 chr4:59853221-59853878 3 310 343 intergenic 0 0 0,0,0 0 0,0,0 0 0 0 0 0 0 0 0 0 0 1 chimp,human,macaque,orangutan, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000249382.1 ENST00000507912.1 chr4:59853249-59853870 2 472 147 intergenic 1.61 0 0,0,0 0 0,0,0 0 0 0 0 0 0 0 0 0 0 1 chimp,human,macaque,orangutan, lincRNA retained_intron A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000251266.1 ENST00000509782.1 chr4:59879291-59912677 2 588 32796 intergenic -6.15 1 0,1,0 0 0,0,0 0 3.63370532991828 0 0 4.25185998292475 0 0 4.3343395536041 0 0 0 chimp,horse,human,macaque,marmoset,orangutan, lincRNA lincRNA A549@0.0140445,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000250375.2 ENST00000502668.2 chr4:59912738-59940974 3 302 27930 intergenic 4.03 1 0,0,1 0 0,0,0 0 3.5546365914787 0 9.56953642384106 14.0595775152166 0 8.77483443708609 13.928141783029 0 0 0 chimp,dog,horse,human,macaque,orangutan,panda, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000249111.1 ENST00000512546.1 chr4:60018552-60041864 2 325 22985 intergenic 0 0 0,1,0 0 0,0,0 0 0 0 40.7323076923077 3.14713943876441 0 34.1169230769231 4.03711115945182 0 0 0 cat,chimp,cow,dog,elephant,guinea_pig,horse,human,macaque,marmoset,mouse,orangutan,panda,rabbit, lincRNA lincRNA A549@0.03017,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000249392.1 ENST00000504537.1 chr4:60416860-60496042 6 552 78620 intergenic -1.54 0 0,0,0 0 0,0,0 0 2.2534088018316 0 0 3.67367082167387 1.912 0 3.29699821928263 2.008 1 1 chimp,human,macaque,marmoset,orangutan, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000249892.1 ENST00000511603.1 chr4:60633534-60657832 4 756 23536 intergenic 1.22 0 0,0,0 0 0,0,0 0 8.1643864717879 0 0 10.9707256968049 0 0 11.7964394969409 0 1 1 chimp,human,macaque,marmoset,orangutan, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000249066.1 ENST00000509559.1 chr4:61616304-61655717 3 581 38828 intergenic -2.77 0 0,0,0 0 0,0,0 0 5.65344596682806 0 0 8.83169362315855 0 15.8674698795181 10.9305398166272 0 0 0 human,macaque,marmoset,orangutan,pig, processed_transcript processed_transcript A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000240152.2 ENST00000506379.1 chr4:62009374-62019447 4 592 9475 intergenic -2.79 0 0,0,0 0 0,0,0 0 38.0641688654354 0 0 44.9776253298153 0 8.3125 43.1169393139842 0 0 0 chimp,elephant,horse,human,macaque,marmoset,orangutan, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000240152.2 ENST00000398777.3 chr4:62009375-62019680 2 544 9759 intergenic -4.49 0 0,0,1 0 0,0,0 0 36.9564504559893 0 0 43.668716056973 0 9.04595588235294 41.8621785018957 0 1 1 chimp,human,macaque,marmoset,orangutan, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 2 44 0 0 ENSG00000205682.2 ENST00000381217.2 chr4:62285964-62293939 3 2076 5895 intronic 14.94 0 0,0,0 0 0,1,0 0 0 0 0 7.61645462256149 0 0 8.54113655640373 0 1 1 chimp,human,macaque,marmoset,orangutan, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0.002624,HMEC@0.007878,HSMM@0,HUVEC@0.0154135,K562@0,MCF7@0,NHEK@0.0231527,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000248692.1 ENST00000504135.1 chr4:62937470-63031263 8 534 93245 exonic -2.70 0 0,0,0 0 0,0,0 0 10.4340822564213 0 4.77153558052434 15.5669365649633 0 3.22846441947566 18.6693013030189 0 0 0 chimp,cow,dog,elephant,horse,human,macaque,marmoset,orangutan,pig, processed_transcript processed_transcript A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000248692.1 ENST00000506704.1 chr4:62937473-63031272 9 597 93186 exonic -2.70 0 0,0,0 0 0,0,0 0 10.4406885154422 0 4.2680067001675 15.5767926512566 0 2.88777219430486 18.6811216277123 0 0 0 chimp,dog,elephant,horse,human,macaque,marmoset,orangutan, processed_transcript processed_transcript A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000248692.1 ENST00000509461.1 chr4:62938565-63031272 8 473 92220 intergenic 4.03 0 0,0,0 0 0,0,0 0 6.97111255692908 0 0 11.5761006289308 0 0 15.0059531554977 0 0 0 chimp,dog,elephant,horse,human,macaque,marmoset,orangutan,pig, processed_transcript processed_transcript A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000248692.1 ENST00000502339.1 chr4:62983623-63002474 3 348 18499 intergenic -4.42 0 0,0,1 0 0,0,0 0 15.2801773068815 29.12 0 22.3113681820639 50.21 0 22.1621168711822 76.44 0 0 cat,chimp,cow,dog,elephant,horse,human,macaque,marmoset,orangutan,panda,pig, processed_transcript retained_intron A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000251055.2 ENST00000507857.2 chr4:63994029-64009599 3 669 14897 intergenic -0.98 1 0,0,0 0 0,0,0 0 0 0 0 0.68872927435054 0 0 3.94515674296838 0 0 0 chimp,cow,elephant,human,marmoset,orangutan, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000250775.1 ENST00000508825.1 chr4:64334419-64359996 3 445 25128 intergenic -1.36 0 0,1,1 0 0,0,0 0 2.73997134670487 0 4.29662921348315 5.20367717287488 0 0 5.90365329512894 0 0 0 cat,chimp,cow,dog,guinea_pig,horse,human,orangutan,panda,pig, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@1.3471,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000250125.1 ENST00000509932.1 chr4:65779999-65870218 7 4072 86135 intergenic 1.15 1 0,0,0 0 0,0,0 0 3.77719858361874 0 0 8.01147036628548 0 0 9.04914378591745 0 0 0 chimp,cow,dog,horse,human,macaque,marmoset,orangutan,pig, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0.005104,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000250846.2 ENST00000535369.1 chr4:66535679-66536157 1 478 0 exonic 2.20 0 0,0,1 0 0,0,0 43.6443514644351 0 133.217 21.4853556485356 0 104.728 19.7991631799163 0 103.258 0 0 chimp,cow,elephant,horse,human,macaque,marmoset,orangutan,panda,pig,rat, lincRNA processed_transcript A549@0.108627,AG04450@0,BJ@0.133779,GM12878@0,H1HESC@0.02498,HELAS3@0.00734,HEPG2@0,HMEC@0,HSMM@0.0097515,HUVEC@0.018035,K562@0,MCF7@0,NHEK@0,NHLF@0.01299,SKNSHRA@0, 0 0 0 0 ENSG00000250846.2 ENST00000509473.1 chr4:66535679-66559104 4 1173 22246 exonic 2.20 1 0,0,1 0 0,0,0 110.221653878943 4.80432437292098 133.217 62.150042625746 7.55650454014205 104.728 55.4057971014493 8.52166681650634 103.258 0 0 chimp,elephant,human,macaque,marmoset,orangutan,panda, lincRNA processed_transcript A549@0.108627,AG04450@0,BJ@0.133779,GM12878@0,H1HESC@0.02498,HELAS3@0.00734,HEPG2@0,HMEC@0,HSMM@0.0097515,HUVEC@0.018035,K562@0,MCF7@0,NHEK@0,NHLF@0.01299,SKNSHRA@0, 0 0 0 0 ENSG00000250846.2 ENST00000514260.1 chr4:66536248-66559104 2 420 22434 intergenic 0 1 0,0,1 0 0,0,0 116.442857142857 6.0458233039137 129.621 57.2952380952381 8.63675670856735 95.949 59.0904761904762 9.20620486761166 94.07 0 0 chimp,horse,human,macaque,marmoset, lincRNA processed_transcript A549@0.108627,AG04450@0,BJ@0.133779,GM12878@0,H1HESC@0.02498,HELAS3@0.00734,HEPG2@0,HMEC@0,HSMM@0.0097515,HUVEC@0.018035,K562@0,MCF7@0,NHEK@0,NHLF@0.01299,SKNSHRA@0, 0 0 0 0 ENSG00000250846.2 ENST00000507117.1 chr4:66536327-66563747 2 144 27274 intergenic 0 0 0,1,0 0 0,0,0 152 7.12165432279827 135.789 108.861111111111 11.4434626384102 74.99 105.534722222222 12.4631883845421 74.655 0 0 chimp,horse,human,macaque,marmoset,mouse,orangutan,pig, lincRNA processed_transcript A549@0.108627,AG04450@0,BJ@0.133779,GM12878@0,H1HESC@0.02498,HELAS3@0.00734,HEPG2@0,HMEC@0,HSMM@0.0097515,HUVEC@0.018035,K562@0,MCF7@0,NHEK@0,NHLF@0.01299,SKNSHRA@0, 0 0 0 0 ENSG00000248479.1 ENST00000503625.1 chr4:66567920-66571271 2 383 2966 intergenic -3.09 0 0,0,0 0 0,0,0 0 2.89278489548213 0 4.93472584856397 3.00674308833446 0 5.08093994778068 3.61159811193527 0 0 0 chimp,cow,dog,elephant,guinea_pig,horse,human,macaque,marmoset,orangutan,panda,rabbit, lincRNA lincRNA A549@0.12147,AG04450@0.0238775,BJ@0.172266,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0.012631,K562@0,MCF7@0,NHEK@0,NHLF@0.020272,SKNSHRA@0, 0 0 0 0 ENSG00000251527.1 ENST00000507344.1 chr4:66724479-66725922 2 766 675 intergenic 1.12 0 0,0,0 0 0,0,0 0 0 0 0 0 0 0 0 0 0 0 cat,chimp,cow,dog,elephant,guinea_pig,horse,human,macaque,marmoset,mouse,orangutan,panda,pig,rabbit, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000249413.1 ENST00000508572.1 chr4:66864564-67015730 4 750 150410 intergenic 4.18 0 0,1,0 0 0,0,0 0 5.3650289209494 0 0 9.30880925470381 0 0 9.72890765241673 0 0 1 chimp,human, processed_transcript processed_transcript A549@1.25004,AG04450@0,BJ@0.0124205,GM12878@0.369172,H1HESC@0.394305,HELAS3@4.9731,HEPG2@6.106,HMEC@0,HSMM@0,HUVEC@0,K562@0.127531,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0.486982, 0 0 0 0 ENSG00000249413.1 ENST00000513540.1 chr4:66868999-66882510 2 550 12959 intergenic -7.53 0 0,0,0 0 0,0,0 0 0 0 0 0.776911798749904 0 0 0.90176711165985 0 0 0 cat,chimp,cow,dog,elephant,guinea_pig,human,macaque,marmoset,orangutan,panda,pig,rabbit, processed_transcript processed_transcript A549@1.25004,AG04450@0,BJ@0.0124205,GM12878@0.369172,H1HESC@0.394305,HELAS3@4.9731,HEPG2@6.106,HMEC@0,HSMM@0,HUVEC@0,K562@0.127531,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0.486982, 0 0 0 0 ENSG00000250075.1 ENST00000502400.1 chr4:68283023-68333969 4 1987 48953 intergenic -0.93 0 0,0,0 0 0,0,0 4.20734776044288 3.62353686188793 0 0 5.5177823626744 0 0 10.5254223438809 0 1 1 chimp,human,macaque,marmoset,orangutan, lincRNA lincRNA A549@0.00109,AG04450@0.0022515,BJ@0.03785,GM12878@0.026997,H1HESC@0,HELAS3@0.0055245,HEPG2@0.003523,HMEC@0.014903,HSMM@0.0177535,HUVEC@0.004835,K562@0.042544,MCF7@0.0096655,NHEK@0.069859,NHLF@0.000969,SKNSHRA@0.034602, 0 0 0 0 ENSG00000250075.1 ENST00000503987.1 chr4:68284260-68286772 3 760 1748 intergenic -2.08 0 0,0,1 0 0,0,0 11 0 0 0 0 0 0 0 0 0 1 chimp,human,macaque,orangutan, lincRNA lincRNA A549@0.00109,AG04450@0.0022515,BJ@0.03785,GM12878@0.026997,H1HESC@0,HELAS3@0.0055245,HEPG2@0.003523,HMEC@0.014903,HSMM@0.0177535,HUVEC@0.004835,K562@0.042544,MCF7@0.0096655,NHEK@0.069859,NHLF@0.000969,SKNSHRA@0.034602, 0 0 0 0 ENSG00000250075.1 ENST00000505155.1 chr4:68286477-68287718 2 407 832 intergenic -7.98 1 0,0,0 0 0,0,0 0 0 0 0 0 0 0 0 0 0 1 chimp,human,macaque,orangutan, lincRNA lincRNA A549@0.00109,AG04450@0.0022515,BJ@0.03785,GM12878@0.026997,H1HESC@0,HELAS3@0.0055245,HEPG2@0.003523,HMEC@0.014903,HSMM@0.0177535,HUVEC@0.004835,K562@0.042544,MCF7@0.0096655,NHEK@0.069859,NHLF@0.000969,SKNSHRA@0.034602, 0 0 0 0 ENSG00000248049.2 ENST00000498917.2 chr4:68566998-68588223 3 1442 19779 intergenic -1.00 1 1,1,1 1 0,0,0 0 0 0 1.24826629680999 2.03008241063755 43.102 1.24826629680999 47.8134384953739 43.404 0 1 chimp,human,orangutan, lincRNA processed_transcript A549@4.11223,AG04450@4.10783,BJ@4.20295,GM12878@7.26436,H1HESC@2.6618,HELAS3@3.68154,HEPG2@4.59311,HMEC@3.2292,HSMM@2.67931,HUVEC@3.03547,K562@9.54682,MCF7@1.62469,NHEK@9.59596,NHLF@2.4551,SKNSHRA@4.79282, 0 0 0 0 ENSG00000248049.2 ENST00000506606.1 chr4:68567051-68588220 2 2231 18936 intergenic -1.00 1 1,1,1 1 0,0,0 0 0 0 0 2.1204583861428 45.202 35.0546839982071 45.8119455006337 45.504 0 1 chimp,human,orangutan, lincRNA processed_transcript A549@4.11223,AG04450@4.10783,BJ@4.20295,GM12878@7.26436,H1HESC@2.6618,HELAS3@3.68154,HEPG2@4.59311,HMEC@3.2292,HSMM@2.67931,HUVEC@3.03547,K562@9.54682,MCF7@1.62469,NHEK@9.59596,NHLF@2.4551,SKNSHRA@4.79282, 0 0 0 0 ENSG00000248049.2 ENST00000500538.2 chr4:68567079-68946670 8 3344 376233 intronic 7.21 1 0,1,0 1 0,0,0 0 2.37073302979802 0 0 8.01026225769669 45.202 138.74043062201 14.6566595700005 45.504 0 0 macaque,orangutan, lincRNA processed_transcript A549@4.11223,AG04450@4.10783,BJ@4.20295,GM12878@7.26436,H1HESC@2.6618,HELAS3@3.68154,HEPG2@4.59311,HMEC@3.2292,HSMM@2.67931,HUVEC@3.03547,K562@9.54682,MCF7@1.62469,NHEK@9.59596,NHLF@2.4551,SKNSHRA@4.79282, 0 0 0 0 ENSG00000248049.2 ENST00000514109.1 chr4:68567113-68586736 3 783 18836 intergenic -2.79 0 0,1,0 1 0,0,0 0 0 0 0 2.1317158632406 45.202 134.88122605364 44.6002335952431 45.504 0 0 chimp,human,marmoset,mouse,opossum,orangutan, lincRNA processed_transcript A549@4.11223,AG04450@4.10783,BJ@4.20295,GM12878@7.26436,H1HESC@2.6618,HELAS3@3.68154,HEPG2@4.59311,HMEC@3.2292,HSMM@2.67931,HUVEC@3.03547,K562@9.54682,MCF7@1.62469,NHEK@9.59596,NHLF@2.4551,SKNSHRA@4.79282, 0 0 0 0 ENSG00000248049.2 ENST00000502758.1 chr4:68597862-68656229 6 541 57816 exonic -2.50 0 0,0,1 0 0,0,0 12.2458410351201 4.12503459250035 0 43.9334565619224 13.7182267884323 0 40.9852125693161 16.8813477238135 0 0 0 chimp,cow,horse,human,macaque,marmoset,orangutan,panda,pig,rabbit, lincRNA processed_transcript A549@4.11223,AG04450@4.10783,BJ@4.20295,GM12878@7.26436,H1HESC@2.6618,HELAS3@3.68154,HEPG2@4.59311,HMEC@3.2292,HSMM@2.67931,HUVEC@3.03547,K562@9.54682,MCF7@1.62469,NHEK@9.59596,NHLF@2.4551,SKNSHRA@4.79282, 0 0 0 0 ENSG00000248049.2 ENST00000499180.2 chr4:68928780-68945944 3 406 16754 intronic -1.71 0 0,0,0 0 0,0,0 0 8.30959770801003 0 6.47536945812808 17.300525247702 0 255.960591133005 30.8124626954757 369.355 0 0 cat,chimp,dog,guinea_pig,horse,human,macaque,marmoset,orangutan, lincRNA processed_transcript A549@4.11223,AG04450@4.10783,BJ@4.20295,GM12878@7.26436,H1HESC@2.6618,HELAS3@3.68154,HEPG2@4.59311,HMEC@3.2292,HSMM@2.67931,HUVEC@3.03547,K562@9.54682,MCF7@1.62469,NHEK@9.59596,NHLF@2.4551,SKNSHRA@4.79282, 0 0 0 0 ENSG00000248049.2 ENST00000511571.1 chr4:68928801-68946363 3 829 16729 intronic -0.96 0 0,0,0 0 0,0,0 0 8.32201566142627 0 0 17.4835315918465 0 140.746682750302 29.3856177894674 380.401 0 0 chimp,human,macaque,orangutan,rabbit, lincRNA processed_transcript A549@4.11223,AG04450@4.10783,BJ@4.20295,GM12878@7.26436,H1HESC@2.6618,HELAS3@3.68154,HEPG2@4.59311,HMEC@3.2292,HSMM@2.67931,HUVEC@3.03547,K562@9.54682,MCF7@1.62469,NHEK@9.59596,NHLF@2.4551,SKNSHRA@4.79282, 0 0 0 0 ENSG00000250696.1 ENST00000504301.1 chr4:70047818-70080193 5 564 31803 exonic 2.42 0 0,0,0 0 0,0,0 0 0 0 33.6524822695035 3.49621104927208 0 97.5656028368794 18.442222431846 31.953 0 0 chimp,dog,horse,human,macaque,mouse,orangutan,panda,pig,rabbit,rat, processed_transcript processed_transcript A549@0.0009415,AG04450@0,BJ@0,GM12878@0.000885,H1HESC@0,HELAS3@0.017195,HEPG2@0.0375285,HMEC@0,HSMM@0,HUVEC@0,K562@0.0036415,MCF7@0.0022775,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000250696.1 ENST00000505646.1 chr4:70066138-70082484 4 2644 13696 exonic 3.63 0 0,0,0 0 0,0,0 0 0 0 11.3010590015129 8.11842873831776 0 31.3861573373676 30.595648364486 80.99 0 0 chimp,horse,human,macaque,orangutan,panda,rabbit, processed_transcript processed_transcript A549@0.0009415,AG04450@0,BJ@0,GM12878@0.000885,H1HESC@0,HELAS3@0.017195,HEPG2@0.0375285,HMEC@0,HSMM@0,HUVEC@0,K562@0.0036415,MCF7@0.0022775,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000248567.1 ENST00000507156.1 chr4:72687022-72689697 4 579 2090 intergenic -4.33 0 0,0,1 0 0,0,0 0 0 0 0 0 0 70.4663212435233 2.60287081339713 0 0 1 chimp,human,marmoset,orangutan, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000250877.1 ENST00000503918.1 chr4:73188745-73196468 2 423 7298 exonic 0 0 0,0,0 0 0,0,0 59.5862884160757 7.93368046040011 7.81 81.1182033096927 18.1819676623733 22.968 92.3191489361702 19.2544532748698 23.146 0 0 chimp,cow,dog,elephant,horse,human,macaque,marmoset,opossum,orangutan,panda,pig,rabbit, antisense antisense A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0.0063285, 0 0 0 0 ENSG00000250220.1 ENST00000502790.1 chr4:74124926-74183670 5 680 58056 intergenic -2.54 1 1,1,1 1 0,0,0 0 3.8682651233292 208.492 8.65 4.00254926278076 346.232 8.575 10.3592221303569 337.258 0 0 chimp,elephant,human,macaque,marmoset,orangutan,panda,rabbit, antisense antisense A549@0.0161845,AG04450@0.006544,BJ@0.0071885,GM12878@0.01652,H1HESC@0.0103955,HELAS3@0.0032985,HEPG2@0.004277,HMEC@0.02391,HSMM@0.0133115,HUVEC@0.0043445,K562@0.017536,MCF7@0.0251855,NHEK@0.0115467,NHLF@0.0453535,SKNSHRA@0.056749, 0 0 0 0 ENSG00000250436.1 ENST00000502291.1 chr4:74374520-74394250 4 759 18965 intergenic -5.16 0 0,0,0 0 0,0,0 0 0 0 64.7312252964427 1.03791194305299 34.144 65.2911725955204 1.14015291326127 41.454 0 0 cat,chimp,cow,dog,elephant,horse,human,macaque,marmoset,mouse,orangutan,panda,pig,rat, lincRNA lincRNA A549@0.0047705,AG04450@0,BJ@0,GM12878@0.0064275,H1HESC@0.009998,HELAS3@0.009174,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0.014495,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000250436.1 ENST00000508147.1 chr4:74375916-74394439 2 453 18068 intergenic 0.15 0 0,0,0 0 0,0,0 0 0 0 114.245033112583 0.639915873367279 8.122 115.183222958057 0.664766437901262 9.612 0 0 cat,chimp,cow,dog,elephant,horse,human,macaque,marmoset,mouse,orangutan,panda,pig,rabbit,rat, lincRNA lincRNA A549@0.0047705,AG04450@0,BJ@0,GM12878@0.0064275,H1HESC@0.009998,HELAS3@0.009174,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0.014495,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000250436.1 ENST00000504368.1 chr4:74375928-74399845 2 368 23547 intergenic -1.74 0 0,0,1 0 0,0,0 0 1.51233702807152 0 92.9184782608696 3.60279441117765 8.122 71.2173913043478 4.01605300038221 9.612 0 0 cat,chimp,cow,dog,elephant,horse,human,macaque,marmoset,mouse,orangutan,panda,pig,rabbit,rat, lincRNA lincRNA A549@0.0047705,AG04450@0,BJ@0,GM12878@0.0064275,H1HESC@0.009998,HELAS3@0.009174,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0.014495,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000228277.1 ENST00000436089.1 chr4:74576019-74580244 3 572 3649 intergenic -3.01 0 0,0,0 0 0,0,0 0 0 0 0 0 11.117 0 0 14.068 0 0 chimp,elephant,human,macaque,marmoset,orangutan, lincRNA lincRNA A549@0.0053985,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0.014242,HSMM@0,HUVEC@0,K562@0.0042715,MCF7@0,NHEK@0.00222,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000251531.1 ENST00000513776.1 chr4:75144014-75196255 2 821 51418 intronic -14.74 0 1,1,1 0 0,0,0 0 11.1711073942977 0 0 18.0558364774981 0 0 19.4165661830487 0 1 1 chimp,human,macaque,marmoset,orangutan, lincRNA lincRNA A549@1.35345,AG04450@0.298762,BJ@0.149119,GM12878@0.005696,H1HESC@0,HELAS3@0.0608615,HEPG2@0,HMEC@1.41119,HSMM@0.0100005,HUVEC@0.179932,K562@36.0158,MCF7@0.0716745,NHEK@2.52939,NHLF@0.0638015,SKNSHRA@0, 0 0 0 0 ENSG00000250532.1 ENST00000508581.1 chr4:75284634-75306174 2 556 20982 intergenic -1.64 0 0,0,0 0 0,0,0 0 1.81584215041464 0 19.3776978417266 4.30044800305023 0 29.9028776978417 4.7754265560957 0 0 0 chimp,cow,dog,elephant,guinea_pig,human,macaque,mouse,orangutan,rabbit, antisense antisense A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0.014961,HEPG2@0.0210025,HMEC@1.30136,HSMM@0,HUVEC@0,K562@0,MCF7@0.044011,NHEK@7.40617,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000249942.1 ENST00000510419.1 chr4:75418301-75514664 6 726 95627 encompassing -9.10 0 0,0,1 0 0,0,0 0 0.787790059292877 0 0 7.10180179238081 0 0 7.97867757014233 0 0 0 chimp,dog,horse,human,macaque,marmoset,orangutan, antisense antisense A549@0.081699,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0.009965,K562@0,MCF7@0.0471275,NHEK@0.088347,NHLF@0.002636,SKNSHRA@0, 0 0 0 0 ENSG00000248760.1 ENST00000515302.1 chr4:75454449-75475972 2 556 20965 intergenic -1.64 0 0,0,0 0 0,0,0 0 1.29940376818507 0 19.7517985611511 3.77262103505843 0 19.8741007194245 5.55721440496065 0 0 0 chimp,cow,dog,elephant,guinea_pig,human,macaque,mouse,orangutan,rabbit, antisense antisense A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0.029352,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@1.08543,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000249717.1 ENST00000508031.1 chr4:75881184-75895572 4 2542 11840 intronic -2.89 1 0,0,0 0 0,0,0 0 11.4392736486486 0 14.1970889063729 14.4896959459459 2.39 16.6207710464201 15.3378378378378 2.51 0 0 chimp,cow,human,macaque,marmoset,orangutan, antisense antisense A549@0,AG04450@0,BJ@0,GM12878@0.007128,H1HESC@0.004386,HELAS3@0,HEPG2@0.002143,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0.0072345,NHEK@0.00139567,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000249717.1 ENST00000507517.1 chr4:75890381-75895334 3 943 4006 intronic 2.44 1 0,0,1 0 0,0,0 0 33.8095356964553 0 11.3785790031813 45.5297054418372 2.39 11.5005302226935 48.164752870694 2.51 0 1 chimp,human,marmoset,orangutan, antisense antisense A549@0,AG04450@0,BJ@0,GM12878@0.007128,H1HESC@0.004386,HELAS3@0,HEPG2@0.002143,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0.0072345,NHEK@0.00139567,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000248165.1 ENST00000513770.1 chr4:75919087-75960034 4 586 40355 intronic -4.20 1 0,1,1 0 0,0,0 0 3.54488910915624 0 3.53242320819113 6.84777598810556 0 6.11092150170649 7.99799281377772 0 0 0 chimp,cow,horse,human,macaque,marmoset,orangutan,panda,pig,rabbit, antisense antisense A549@0.0105225,AG04450@0,BJ@0,GM12878@0.0079455,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0.00781533,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000251185.1 ENST00000505930.1 chr4:76194278-76286392 2 467 91645 intergenic 4.22 0 0,0,0 0 0,0,0 0 4.507720006547 0 0 5.31222652626985 0 0 6.17406296033608 0 0 0 chimp,human,macaque,orangutan,panda, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0.0063365,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0.029059, 0 0 0 0 ENSG00000251454.1 ENST00000509215.1 chr4:76266489-76284234 4 418 17321 intergenic 0 0 0,0,0 0 0,0,0 0 1.35765833381444 21.39 5.7177033492823 3.46839097049824 0 6.00478468899522 5.26620864846141 2.916 0 0 cat,chimp,cow,dog,elephant,horse,human,macaque,marmoset,orangutan,panda,pig,rabbit, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000251383.1 ENST00000512043.1 chr4:76279286-76287776 4 1139 7345 intergenic 1.83 1 0,0,1 0 0,0,0 0 5.00558202859088 0 0 0 3.06 0 2.69598366235534 3.18 1 1 chimp,human,macaque,marmoset,orangutan, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000248646.1 ENST00000510744.1 chr4:76286417-76359659 2 471 72769 intergenic -0.84 0 0,0,0 0 0,0,0 0 1.84703651280078 0 82.9002123142251 4.64906759746595 0 83.7218683651805 5.42623919526172 0 0 0 chimp,cow,guinea_pig,human,macaque,marmoset,mouse,orangutan, lincRNA lincRNA A549@0.0393755,AG04450@0,BJ@0,GM12878@0.0123655,H1HESC@0,HELAS3@0.0176495,HEPG2@0,HMEC@0,HSMM@0.0139885,HUVEC@0,K562@0.0056605,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000250735.1 ENST00000507739.1 chr4:76326405-76348232 3 678 21145 intergenic -8.02 0 0,0,0 0 0,0,0 0 0 15.677 0 2.94689051785292 37.994 0 4.23636793568219 39.069 0 0 chimp,human,macaque,marmoset,orangutan,rabbit,rat, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0.012224,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0.0357995,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0.03486, 0 0 0 0 ENSG00000250735.1 ENST00000515230.1 chr4:76326428-76348233 4 773 21026 intergenic 2.59 0 0,0,0 0 0,0,0 0 0 15.677 0 2.96356891467707 37.994 0 4.26034433558451 39.069 0 0 chimp,human,macaque,marmoset,orangutan,rabbit,rat, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0.012224,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0.0357995,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0.03486, 0 0 0 0 ENSG00000229717.2 ENST00000438151.2 chr4:76751904-76753858 1 1954 0 intergenic -0.57 0 0,0,0 0 0,1,0 0 0 0 0 0 0 0 0 0 1 1 chimp,human,macaque,marmoset,orangutan, antisense antisense A549@0.0120215,AG04450@0.009896,BJ@0.0109805,GM12878@0,H1HESC@0.0053055,HELAS3@0,HEPG2@0.0029975,HMEC@0.004189,HSMM@0.002332,HUVEC@0.0787745,K562@0,MCF7@0,NHEK@0.0153907,NHLF@0,SKNSHRA@0.091195, 0 0 0 0 ENSG00000245928.2 ENST00000501239.2 chr4:76901943-76927095 3 1682 23466 intronic -6.26 0 0,0,0 0 0,0,0 0 7.27196795363505 0 0 11.7083439870451 2.39 2.02259215219976 13.8902241540953 2.59 1 1 chimp,human,macaque,marmoset,orangutan, antisense antisense A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000231335.1 ENST00000425645.1 chr4:77558776-77565521 4 235 6504 intronic 0 0 0,1,0 0 0,0,0 0 10.3161131611316 0 93.9702127659574 36.0418204182042 0 81.9446808510638 34.3213407134071 0 0 0 chimp,human,macaque,marmoset,orangutan, sense_intronic sense_intronic A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0.029902,K562@0,MCF7@0,NHEK@0.028839,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000233860.1 ENST00000452412.1 chr4:77678113-77679627 2 553 959 exonic -0.23 0 0,0,0 0 0,0,0 0 0 0 0 1.29301355578728 4.02 0 3.51094890510949 4.498 0 0 cat,chimp,dog,elephant,horse,human,macaque,marmoset,orangutan,panda,pig, antisense antisense A549@0.0364605,AG04450@0.0321565,BJ@0.091429,GM12878@0.0168935,H1HESC@0.045564,HELAS3@0,HEPG2@0.029489,HMEC@0,HSMM@0,HUVEC@0,K562@0.0251015,MCF7@0,NHEK@0,NHLF@0.115002,SKNSHRA@0.015031, 0 0 0 0 ENSG00000224218.1 ENST00000449007.1 chr4:77679707-77723117 2 108 43300 intronic 0 0 0,1,0 0 0,0,0 0 7.29193995381062 0 0 9.2778752886836 0 0 9.74327944572748 0 0 0 human,macaque,marmoset, antisense antisense A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000249036.1 ENST00000513871.1 chr4:78315645-78415440 3 568 99223 intergenic 0.06 0 0,1,0 0 0,0,0 0 2.08501053183234 0 0 2.98083105731534 15.987 0 3.33745200205598 21.278 0 1 human,orangutan, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000251442.1 ENST00000503259.1 chr4:79567057-79584458 3 854 16543 intergenic -1.50 0 0,1,0 0 0,0,0 0 12.7655806081122 0 57.1007025761124 35.1763888049326 2.04 53.4660421545668 34.7348123073203 5.765 0 0 cat,chimp,dog,guinea_pig,horse,human,macaque,marmoset,mouse,orangutan,rabbit, lincRNA processed_transcript A549@0.254495,AG04450@0.428015,BJ@0.475249,GM12878@0.036866,H1HESC@0,HELAS3@0.357328,HEPG2@0.0591895,HMEC@0.094362,HSMM@0.0893175,HUVEC@0.776303,K562@0.369283,MCF7@0.001013,NHEK@0.66449,NHLF@0.993186,SKNSHRA@0.068981, 0 0 0 0 ENSG00000251442.1 ENST00000507802.1 chr4:79567148-79602049 4 582 34313 intergenic -1.50 0 0,1,0 0 0,0,0 0 8.63215107976569 0 78.8591065292096 22.296593127969 2.04 78.4536082474227 22.4954099029522 5.765 0 0 cat,chimp,cow,human,marmoset,orangutan,rabbit, lincRNA processed_transcript A549@0.254495,AG04450@0.428015,BJ@0.475249,GM12878@0.036866,H1HESC@0,HELAS3@0.357328,HEPG2@0.0591895,HMEC@0.094362,HSMM@0.0893175,HUVEC@0.776303,K562@0.369283,MCF7@0.001013,NHEK@0.66449,NHLF@0.993186,SKNSHRA@0.068981, 0 0 0 0 ENSG00000251442.1 ENST00000514130.1 chr4:79567243-79584298 4 590 16459 intergenic -2.04 0 0,1,0 0 0,0,0 0 12.8307309071025 0 63.5050847457627 35.3559146971262 13.336 57.9728813559322 34.9120845737894 17.221 0 0 cat,chimp,dog,human,macaque,marmoset,orangutan,rabbit, lincRNA processed_transcript A549@0.254495,AG04450@0.428015,BJ@0.475249,GM12878@0.036866,H1HESC@0,HELAS3@0.357328,HEPG2@0.0591895,HMEC@0.094362,HSMM@0.0893175,HUVEC@0.776303,K562@0.369283,MCF7@0.001013,NHEK@0.66449,NHLF@0.993186,SKNSHRA@0.068981, 0 0 0 0 ENSG00000251442.1 ENST00000503539.1 chr4:79567338-79603817 4 2182 34291 intergenic -1.42 0 0,1,1 0 0,0,0 0 8.63768918958327 0 6.6205316223648 22.3108979032399 47.936 6.80934922089826 22.5098422326558 48.266 0 0 chimp,elephant,human,macaque,orangutan, lincRNA processed_transcript A549@0.254495,AG04450@0.428015,BJ@0.475249,GM12878@0.036866,H1HESC@0,HELAS3@0.357328,HEPG2@0.0591895,HMEC@0.094362,HSMM@0.0893175,HUVEC@0.776303,K562@0.369283,MCF7@0.001013,NHEK@0.66449,NHLF@0.993186,SKNSHRA@0.068981, 0 0 0 0 ENSG00000251442.1 ENST00000504675.1 chr4:79567340-79603546 5 1980 34218 intergenic -0.94 0 0,1,0 0 0,0,0 0 8.65611666374423 0 7.2959595959596 22.3584955286691 47.936 7.5040404040404 22.5578642819569 290.78 0 0 chimp,elephant,human,macaque,orangutan, lincRNA processed_transcript A549@0.254495,AG04450@0.428015,BJ@0.475249,GM12878@0.036866,H1HESC@0,HELAS3@0.357328,HEPG2@0.0591895,HMEC@0.094362,HSMM@0.0893175,HUVEC@0.776303,K562@0.369283,MCF7@0.001013,NHEK@0.66449,NHLF@0.993186,SKNSHRA@0.068981, 0 0 0 0 ENSG00000251442.1 ENST00000512322.1 chr4:79567371-79603853 3 2092 34386 intergenic -1.42 0 0,1,1 0 0,0,0 0 8.61382539405572 0 6.90535372848948 22.2492584191241 47.936 7.10229445506692 22.4476531146397 47.78 0 0 chimp,elephant,human,macaque,marmoset,orangutan, lincRNA processed_transcript A549@0.254495,AG04450@0.428015,BJ@0.475249,GM12878@0.036866,H1HESC@0,HELAS3@0.357328,HEPG2@0.0591895,HMEC@0.094362,HSMM@0.0893175,HUVEC@0.776303,K562@0.369283,MCF7@0.001013,NHEK@0.66449,NHLF@0.993186,SKNSHRA@0.068981, 0 0 0 0 ENSG00000249307.1 ENST00000510667.1 chr4:79892902-80229626 4 530 336188 intergenic 1.02 1 0,1,1 0 0,0,0 234.820754716981 18.5715492522041 0 190.12641509434 32.2108403631301 0 194.794339622642 32.6686110152653 0 0 0 chimp,cow,dog,human,macaque,marmoset,orangutan,rat, antisense antisense A549@0.0359015,AG04450@0.0152235,BJ@0.0140065,GM12878@0.131721,H1HESC@0.044679,HELAS3@0.012281,HEPG2@0.0266575,HMEC@0.016833,HSMM@0.0099265,HUVEC@0.0409045,K562@5.41132,MCF7@0.0051725,NHEK@0.0235053,NHLF@0,SKNSHRA@0.184129, 0 0 0 0 ENSG00000249307.1 ENST00000509088.1 chr4:79892902-80229698 6 750 336036 intergenic 3.06 1 0,1,1 0 0,0,0 224.98 18.5799497672868 0 210.337333333333 32.2154531062148 0 216.26 32.6729308764537 0 0 0 chimp,dog,horse,human,macaque,marmoset,orangutan,rat, antisense antisense A549@0.0359015,AG04450@0.0152235,BJ@0.0140065,GM12878@0.131721,H1HESC@0.044679,HELAS3@0.012281,HEPG2@0.0266575,HMEC@0.016833,HSMM@0.0099265,HUVEC@0.0409045,K562@5.41132,MCF7@0.0051725,NHEK@0.0235053,NHLF@0,SKNSHRA@0.184129, 0 0 0 0 ENSG00000249307.1 ENST00000513153.1 chr4:80006393-80229807 4 691 222717 intergenic 1.02 1 0,0,1 0 0,0,0 341.201157742402 19.3117364188634 0 340.972503617945 29.9286583422011 0 351.101302460203 30.3899881912921 0 0 0 cat,chimp,cow,dog,elephant,horse,human,macaque,marmoset,opossum,orangutan,panda,rabbit,rat, antisense antisense A549@0.0359015,AG04450@0.0152235,BJ@0.0140065,GM12878@0.131721,H1HESC@0.044679,HELAS3@0.012281,HEPG2@0.0266575,HMEC@0.016833,HSMM@0.0099265,HUVEC@0.0409045,K562@5.41132,MCF7@0.0051725,NHEK@0.0235053,NHLF@0,SKNSHRA@0.184129, 0 0 0 0 ENSG00000249307.1 ENST00000515597.1 chr4:80116988-80220719 2 662 103067 intergenic 2.79 1 0,1,0 0 0,0,0 0 26.1036219158411 0 0 38.6961199996119 0 0 39.3264381421794 0 0 0 cat,chimp,cow,dog,elephant,guinea_pig,horse,human,macaque,marmoset,orangutan,pig,rabbit, antisense antisense A549@0.0359015,AG04450@0.0152235,BJ@0.0140065,GM12878@0.131721,H1HESC@0.044679,HELAS3@0.012281,HEPG2@0.0266575,HMEC@0.016833,HSMM@0.0099265,HUVEC@0.0409045,K562@5.41132,MCF7@0.0051725,NHEK@0.0235053,NHLF@0,SKNSHRA@0.184129, 0 0 0 0 ENSG00000249307.1 ENST00000507761.1 chr4:80116990-80149110 2 840 31278 intergenic 2.79 0 0,1,1 0 0,0,0 0 31.0723831447023 0 0 50.1479314534177 0 0 47.1760982159985 0 0 1 chimp,human,orangutan, antisense antisense A549@0.0359015,AG04450@0.0152235,BJ@0.0140065,GM12878@0.131721,H1HESC@0.044679,HELAS3@0.012281,HEPG2@0.0266575,HMEC@0.016833,HSMM@0.0099265,HUVEC@0.0409045,K562@5.41132,MCF7@0.0051725,NHEK@0.0235053,NHLF@0,SKNSHRA@0.184129, 0 0 0 0 ENSG00000249307.1 ENST00000507476.1 chr4:80116991-80229909 4 781 112131 intergenic 2.79 1 0,1,1 0 0,0,0 392.10371318822 25.9636496597729 0 498.590268886044 39.1609367614665 0 460.612035851473 39.4789487296109 0 0 0 cat,chimp,cow,dog,elephant,guinea_pig,horse,human,macaque,marmoset,mouse,opossum,orangutan,panda,pig,rabbit,rat, antisense antisense A549@0.0359015,AG04450@0.0152235,BJ@0.0140065,GM12878@0.131721,H1HESC@0.044679,HELAS3@0.012281,HEPG2@0.0266575,HMEC@0.016833,HSMM@0.0099265,HUVEC@0.0409045,K562@5.41132,MCF7@0.0051725,NHEK@0.0235053,NHLF@0,SKNSHRA@0.184129, 0 0 0 0 ENSG00000249307.1 ENST00000512130.1 chr4:80118695-80229809 3 522 110588 intergenic 1.02 1 1,1,1 0 0,0,0 454.022988505747 26.3958386081672 0 454.218390804598 40.3824284732521 0 467.722222222222 40.3470720150468 0 0 0 cat,chimp,cow,dog,elephant,horse,human,macaque,marmoset,mouse,opossum,orangutan,panda,pig,rabbit,rat, antisense antisense A549@0.0359015,AG04450@0.0152235,BJ@0.0140065,GM12878@0.131721,H1HESC@0.044679,HELAS3@0.012281,HEPG2@0.0266575,HMEC@0.016833,HSMM@0.0099265,HUVEC@0.0409045,K562@5.41132,MCF7@0.0051725,NHEK@0.0235053,NHLF@0,SKNSHRA@0.184129, 0 0 0 0 ENSG00000249307.1 ENST00000437737.3 chr4:80132835-80166686 2 971 32878 intergenic 1.37 0 0,1,0 0 0,0,0 72.7106076210093 13.4364316564268 139.744 86.0113285272915 22.5641462376057 219.902 91.4582904222451 23.1922258044893 209.888 0 1 chimp,human, antisense antisense A549@0.0359015,AG04450@0.0152235,BJ@0.0140065,GM12878@0.131721,H1HESC@0.044679,HELAS3@0.012281,HEPG2@0.0266575,HMEC@0.016833,HSMM@0.0099265,HUVEC@0.0409045,K562@5.41132,MCF7@0.0051725,NHEK@0.0235053,NHLF@0,SKNSHRA@0.184129, 3 10 0 0 ENSG00000249307.1 ENST00000511895.1 chr4:80132839-80149040 2 793 15406 intergenic -1.64 0 0,1,1 0 0,0,0 86.1361916771753 17.5217447747631 142.04 101.892812105927 29.8272101778528 222.618 108.34552332913 29.108983512917 212.776 0 0 cat,chimp,human,marmoset,mouse,orangutan, antisense antisense A549@0.0359015,AG04450@0.0152235,BJ@0.0140065,GM12878@0.131721,H1HESC@0.044679,HELAS3@0.012281,HEPG2@0.0266575,HMEC@0.016833,HSMM@0.0099265,HUVEC@0.0409045,K562@5.41132,MCF7@0.0051725,NHEK@0.0235053,NHLF@0,SKNSHRA@0.184129, 0 0 0 0 ENSG00000249307.1 ENST00000511241.1 chr4:80179935-80229808 3 676 49193 intergenic 1.02 1 0,0,1 0 0,0,0 349.681952662722 34.8278820157339 0 349.640532544379 50.2421279450329 0 360.031065088757 50.7045108043828 0 0 0 cat,chimp,cow,elephant,human,macaque,marmoset,orangutan,rat, antisense antisense A549@0.0359015,AG04450@0.0152235,BJ@0.0140065,GM12878@0.131721,H1HESC@0.044679,HELAS3@0.012281,HEPG2@0.0266575,HMEC@0.016833,HSMM@0.0099265,HUVEC@0.0409045,K562@5.41132,MCF7@0.0051725,NHEK@0.0235053,NHLF@0,SKNSHRA@0.184129, 0 0 0 0 ENSG00000249307.1 ENST00000505149.1 chr4:80226277-80229952 3 621 3050 intergenic 1.02 1 0,0,1 0 0,0,0 523.260869565217 74.964262295082 0 526.737520128824 126.710819672131 3.224 544.008051529791 99.6295081967213 3.367 0 0 cat,chimp,cow,dog,elephant,horse,human,macaque,marmoset,mouse,opossum,orangutan,panda,pig,rabbit,rat, antisense antisense A549@0.0359015,AG04450@0.0152235,BJ@0.0140065,GM12878@0.131721,H1HESC@0.044679,HELAS3@0.012281,HEPG2@0.0266575,HMEC@0.016833,HSMM@0.0099265,HUVEC@0.0409045,K562@5.41132,MCF7@0.0051725,NHEK@0.0235053,NHLF@0,SKNSHRA@0.184129, 0 0 0 0 ENSG00000250334.1 ENST00000508174.1 chr4:80413570-80497614 4 2076 81962 intergenic 2.41 1 0,0,0 0 0,0,0 71.4682080924855 18.1759351894781 0 135.150770712909 31.8156096727752 0 133.328998073218 31.7698079597862 0 0 0 chimp,guinea_pig,human,macaque,marmoset,orangutan,panda,pig, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0.0014485,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0.0026565,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0.0011075, 0 0 0 0 ENSG00000250334.1 ENST00000515544.1 chr4:80413747-80497612 4 2048 81811 intergenic 2.41 1 0,0,0 0 0,0,0 72.4453125 18.2094828323819 0 136.56689453125 31.8743323025021 0 134.66943359375 31.8284460524868 0 0 0 chimp,cow,elephant,guinea_pig,horse,human,macaque,marmoset,orangutan,panda,pig, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0.0014485,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0.0026565,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0.0011075, 0 0 0 0 ENSG00000251399.1 ENST00000513155.1 chr4:80517696-80518327 2 353 276 intergenic 0 1 0,1,0 0 0,0,0 0 0 0 0 0 0 0 0 0 0 0 cat,chimp,cow,dog,horse,human,macaque,marmoset,orangutan, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000248408.1 ENST00000506460.1 chr4:80584915-80617991 4 737 32333 intergenic -1.30 0 0,1,0 0 0,0,0 0 14.8895246342746 0 0 31.5347787090589 0 0 31.4526644604583 0 0 0 NA lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0.0290755,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000251321.1 ENST00000504263.1 chr4:80748625-80784401 2 2089 33685 intergenic 5.58 1 0,1,0 0 0,0,0 25.397319291527 4.49784770669437 0 49.1330780277645 13.9056553362031 0 63.9415988511249 13.5012320023749 0 0 0 chimp,cow,human,macaque,marmoset,mouse,opossum,orangutan,pig,rabbit, antisense antisense A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000251321.1 ENST00000514836.1 chr4:80748689-80798924 3 370 49861 intergenic 5.58 0 0,1,1 0 0,0,0 0 9.3927919616534 0 0 17.6664126271033 0 0 18.1626321172861 0 0 0 cat,chimp,human,macaque,marmoset, antisense antisense A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000248719.1 ENST00000503589.1 chr4:81104434-81111323 2 564 6323 intronic -3.17 0 0,0,1 0 0,0,0 61.8687943262411 31.2827771627392 0 55.7056737588653 80.4640202435553 0 57.6347517730496 78.7686224893247 0 0 0 cat,chimp,cow,dog,elephant,guinea_pig,horse,human,macaque,marmoset,orangutan,panda,rat, antisense antisense A549@0,AG04450@1.08831,BJ@0.011435,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0.564277,HSMM@0,HUVEC@0,K562@0.0048155,MCF7@0,NHEK@0.00909867,NHLF@0.119929,SKNSHRA@1.65362, 0 0 0 0 ENSG00000251059.1 ENST00000512502.1 chr4:82086094-82114549 5 777 27670 intronic -1.58 1 0,1,0 0 0,0,0 0 19.1599927719552 0 0 26.0980484279002 1.195 0 26.3165522226238 2.259 0 0 chimp,human,macaque,marmoset,orangutan,panda, antisense antisense A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000251059.1 ENST00000505175.1 chr4:82095029-82114334 5 427 18870 intronic -5.63 0 0,1,0 0 0,0,0 0 4.10837307896131 0 0 6.60254372019078 17.209 0 7.03857975622682 21.383 0 0 cat,chimp,cow,human,macaque,marmoset,orangutan, antisense antisense A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000251331.1 ENST00000514050.1 chr4:82523951-82965397 4 468 440972 intergenic -0.52 0 0,1,1 0 0,0,0 63.1410256410256 7.6612596718159 0 207.354700854701 16.2066548442985 19.834 256.431623931624 19.5988951679472 34.789 0 0 cat,chimp,cow,dog,elephant,guinea_pig,horse,human,macaque,marmoset,mouse,orangutan,panda,rabbit,rat, processed_transcript processed_transcript A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0.41603,HELAS3@0.0243405,HEPG2@0,HMEC@0.940945,HSMM@0,HUVEC@0,K562@0,MCF7@0.0492815,NHEK@0.0394203,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000251331.1 ENST00000512343.1 chr4:82524025-82965397 5 493 440871 intergenic 1.17 0 0,1,0 0 0,0,0 59.9391480730223 7.66301480478417 0 177.94523326572 16.2045836537218 19.834 223.809330628803 19.5975103828558 34.789 0 0 chimp,cow,dog,guinea_pig,horse,human,macaque,marmoset,mouse,orangutan,pig,rat, processed_transcript processed_transcript A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0.41603,HELAS3@0.0243405,HEPG2@0,HMEC@0.940945,HSMM@0,HUVEC@0,K562@0,MCF7@0.0492815,NHEK@0.0394203,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000251331.1 ENST00000510780.1 chr4:82524028-82965397 6 533 440826 intergenic 1.17 0 0,1,0 0 0,0,0 55.4409005628518 7.6637970537128 0 164.590994371482 16.2062378353364 19.834 207.013133208255 19.5995109181401 34.789 0 0 chimp,cow,dog,elephant,guinea_pig,horse,human,macaque,marmoset,mouse,orangutan, processed_transcript processed_transcript A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0.41603,HELAS3@0.0243405,HEPG2@0,HMEC@0.940945,HSMM@0,HUVEC@0,K562@0,MCF7@0.0492815,NHEK@0.0394203,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000251331.1 ENST00000508294.1 chr4:82556977-82965397 5 499 407913 intergenic -0.85 0 0,1,0 0 0,0,0 59.2184368737475 7.7859004248455 0 166.294589178357 15.9589005498722 19.834 211.49498997996 19.2972275950999 34.789 0 0 chimp,cow,dog,elephant,horse,human,macaque,marmoset,mouse,orangutan,pig,rat, processed_transcript processed_transcript A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0.41603,HELAS3@0.0243405,HEPG2@0,HMEC@0.940945,HSMM@0,HUVEC@0,K562@0,MCF7@0.0492815,NHEK@0.0394203,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000231782.2 ENST00000426551.1 chr4:83534266-83542590 4 906 7412 intergenic -2.09 0 0,0,0 0 0,1,0 9.85430463576159 8.89557474365893 16.12 0 10.3188073394495 0 0 12.1216945493794 0 1 1 chimp,human,macaque,marmoset,orangutan, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0.00229733,NHLF@0,SKNSHRA@0.0286535, 0 0 0 0 ENSG00000231782.2 ENST00000515811.1 chr4:83534266-83542590 4 844 7474 intergenic -2.09 0 0,0,0 0 0,1,0 10.5781990521327 8.82178217821782 16.12 0 10.2332084559807 0 0 12.021139951833 0 1 1 chimp,human,macaque,marmoset,orangutan, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0.00229733,NHLF@0,SKNSHRA@0.0286535, 0 0 0 0 ENSG00000250057.1 ENST00000515670.1 chr4:84154665-84168366 3 391 13306 intergenic -4.80 0 0,1,1 0 0,0,0 0 3.52510145798888 0 0 1.5831955508793 27.54 66.6086956521739 1.6016834510747 626.382 0 0 cat,chimp,cow,dog,guinea_pig,horse,human,macaque,marmoset,orangutan,rabbit, lincRNA lincRNA A549@0.14552,AG04450@0,BJ@0.0408375,GM12878@0.0986055,H1HESC@0.028603,HELAS3@0.07527,HEPG2@0.0769885,HMEC@0,HSMM@0.015667,HUVEC@0.054221,K562@0.0918185,MCF7@0.025904,NHEK@0.0301083,NHLF@0,SKNSHRA@0.0070575, 0 0 0 0 ENSG00000249171.1 ENST00000510169.1 chr4:84589663-84652908 4 787 62452 intergenic -1.02 0 0,0,0 0 0,0,0 0 26.6301639659258 0 0 37.2173349132133 47.794 0 47.5739447895984 51.136 0 0 cat,chimp,cow,guinea_pig,horse,human,macaque,marmoset,orangutan,rabbit,rat, lincRNA lincRNA A549@0.021,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0.0044185,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000250546.1 ENST00000513489.1 chr4:84717589-85205480 6 733 487148 intergenic 0.03 1 0,0,0 0 0,0,0 59.9399727148704 18.9501404090749 29.886 98.9918144611187 32.1922228973536 24.595 91.0204638472033 34.7671570036211 48.208 0 0 chimp,cow,dog,elephant,horse,human,macaque,marmoset,mouse,orangutan,rabbit, lincRNA processed_transcript A549@0.222537,AG04450@0,BJ@0,GM12878@0.000721,H1HESC@0.106936,HELAS3@0.236873,HEPG2@0.048797,HMEC@0,HSMM@0,HUVEC@0,K562@0.210258,MCF7@0.0976475,NHEK@0,NHLF@0.000698,SKNSHRA@0, 0 0 0 0 ENSG00000250546.1 ENST00000508406.1 chr4:84889235-85214565 8 2787 322529 intergenic 0.34 0 0,0,0 0 0,0,0 0 16.3922158937646 0 1.8783638320775 29.2669496386372 2.39 2.1654108360244 32.6654657410651 3.18 0 0 cat,chimp,cow,dog,elephant,guinea_pig,horse,human,macaque,marmoset,mouse,orangutan,pig,rabbit,rat, lincRNA processed_transcript A549@0.222537,AG04450@0,BJ@0,GM12878@0.000721,H1HESC@0.106936,HELAS3@0.236873,HEPG2@0.048797,HMEC@0,HSMM@0,HUVEC@0,K562@0.210258,MCF7@0.0976475,NHEK@0,NHLF@0.000698,SKNSHRA@0, 0 0 0 0 ENSG00000250546.1 ENST00000510016.1 chr4:85068886-85070441 2 466 1087 intergenic -7.34 0 0,0,0 0 0,0,0 0 0 0 31.1523605150215 0 0 30.9549356223176 0 0 0 0 chimp,cow,dog,guinea_pig,horse,human,macaque,marmoset,mouse,orangutan,panda,pig, lincRNA processed_transcript A549@0.222537,AG04450@0,BJ@0,GM12878@0.000721,H1HESC@0.106936,HELAS3@0.236873,HEPG2@0.048797,HMEC@0,HSMM@0,HUVEC@0,K562@0.210258,MCF7@0.0976475,NHEK@0,NHLF@0.000698,SKNSHRA@0, 0 0 0 0 ENSG00000248749.1 ENST00000504840.1 chr4:85292546-85301342 3 699 8093 intergenic 6.65 0 0,0,0 0 0,0,0 89.3962804005723 68.4201161497591 37.236 50.7210300429185 101.995304584209 39.015 50.343347639485 96.0221178796491 43.264 0 0 cat,chimp,cow,elephant,horse,human,macaque,marmoset,mouse,orangutan,panda,pig, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000251260.1 ENST00000510449.1 chr4:85724411-85731544 2 491 6640 exonic -0.87 0 0,1,0 0 0,0,0 360 51.9344879518072 0 417.83299389002 39.125 0 426.798370672098 37.0256024096386 2.008 0 0 chimp,cow,dog,elephant,guinea_pig,horse,human,macaque,marmoset,mouse,opossum,orangutan,panda,pig,platypus,rabbit,rat, antisense antisense A549@0,AG04450@0,BJ@0.0393845,GM12878@0,H1HESC@0,HELAS3@0.0053835,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000180769.4 ENST00000451762.1 chr4:85887538-85932430 6 6428 38454 exonic 12.99 0 0,1,1 0 0,0,0 24.002800248911 7.74067717272585 0 43.3203173615432 8.51705934363135 68.103 42.2350653391413 9.69147552920372 50.54 0 0 human,macaque,marmoset,orangutan, lincRNA processed_transcript A549@0.233457,AG04450@0.279312,BJ@0.267629,GM12878@0,H1HESC@0.235327,HELAS3@0.0591485,HEPG2@0.0970325,HMEC@0.111693,HSMM@0.271863,HUVEC@0.094291,K562@0.058759,MCF7@0.32408,NHEK@0.106205,NHLF@0.606747,SKNSHRA@0.290063, 0 0 0 0 ENSG00000180769.4 ENST00000318186.3 chr4:85887946-85928168 4 1590 38626 intergenic 2.15 0 0,1,0 0 0,0,0 7.86792452830189 7.706208253508 141.363 32.4421383647799 8.47913322632424 267.164 30.9408805031447 9.64831978460104 236.27 0 0 chimp,human,macaque,marmoset,orangutan,pig, lincRNA processed_transcript A549@0.233457,AG04450@0.279312,BJ@0.267629,GM12878@0,H1HESC@0.235327,HELAS3@0.0591485,HEPG2@0.0970325,HMEC@0.111693,HSMM@0.271863,HUVEC@0.094291,K562@0.058759,MCF7@0.32408,NHEK@0.106205,NHLF@0.606747,SKNSHRA@0.290063, 0 0 0 0 ENSG00000250062.1 ENST00000509322.1 chr4:87039065-87048841 3 763 9009 intronic 0.49 0 0,0,0 0 0,0,0 0 2.83527583527584 0 0 2.13142413142413 0 0 3.64757464757465 0 0 0 chimp,dog,elephant,guinea_pig,horse,human,macaque,marmoset,orangutan,panda, antisense antisense A549@0.0245895,AG04450@0.020224,BJ@0.0073835,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0.0083485,HUVEC@0.131647,K562@0.013692,MCF7@0.0079335,NHEK@0,NHLF@0.00372,SKNSHRA@0.019668, 0 0 0 0 ENSG00000250062.1 ENST00000511917.1 chr4:87040867-87141079 4 1045 99161 intronic 0.49 0 0,0,0 0 0,0,0 0 3.89231653573482 0 0 5.7624570143504 6.756 0 7.18416514557134 9.757 0 0 chimp,dog,elephant,guinea_pig,horse,human,macaque,marmoset,orangutan,panda, antisense antisense A549@0.0245895,AG04450@0.020224,BJ@0.0073835,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0.0083485,HUVEC@0.131647,K562@0.013692,MCF7@0.0079335,NHEK@0,NHLF@0.00372,SKNSHRA@0.019668, 0 0 0 0 ENSG00000250572.1 ENST00000503666.1 chr4:88183083-88187974 2 255 4634 intergenic -0.14 0 0,0,0 0 0,0,0 0 0 0 0 0.464177816141562 12.874 0 1.52071644367717 18.934 0 0 chimp,dog,horse,human,macaque,orangutan,panda,rabbit, lincRNA lincRNA A549@0,AG04450@0.008721,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000249001.1 ENST00000506480.1 chr4:88489187-88653522 4 817 163512 encompassing -0.31 0 0,0,0 0 0,0,0 0 6.30465042321053 0 3.80293757649939 10.4437350163902 0 3.86658506731946 14.0087761142913 0 1 1 chimp,human,macaque,marmoset,orangutan, antisense antisense A549@0.002644,AG04450@0,BJ@0,GM12878@0.032326,H1HESC@0.016195,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0.010945,MCF7@0.0443655,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000249001.1 ENST00000507894.1 chr4:88578245-88594191 2 365 15579 intronic -6.41 0 0,0,0 0 0,0,0 0 3.59329867128827 0 0 13.7777777777778 0 0 14.4292958469735 0 0 0 chimp,cow,dog,elephant,guinea_pig,horse,human,macaque,marmoset,mouse,orangutan,panda,pig,rat, antisense antisense A549@0.002644,AG04450@0,BJ@0,GM12878@0.032326,H1HESC@0.016195,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0.010945,MCF7@0.0443655,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000249001.1 ENST00000506814.1 chr4:88578258-88581948 3 588 3098 intronic -6.41 1 0,0,0 0 0,0,0 0 18.0697224015494 0 0 19.0022595222724 2.151 0 19.5032278889606 2.259 0 0 chimp,cow,dog,elephant,guinea_pig,horse,human,macaque,marmoset,orangutan,panda,pig,rabbit,rat, antisense antisense A549@0.002644,AG04450@0,BJ@0,GM12878@0.032326,H1HESC@0.016195,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0.010945,MCF7@0.0443655,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000249001.1 ENST00000503993.1 chr4:88604150-88655108 3 528 50426 intergenic 2.83 1 0,0,1 0 0,0,0 0 5.50259786618015 0 0 8.56716773093246 6.773 0 9.31303295918772 7.059 0 1 chimp,human,macaque,orangutan, antisense antisense A549@0.002644,AG04450@0,BJ@0,GM12878@0.032326,H1HESC@0.016195,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0.010945,MCF7@0.0443655,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000246375.2 ENST00000500009.2 chr4:89206094-89252573 5 1649 44822 intergenic 7.89 0 1,1,1 1 0,0,0 0 1.51162375619116 0 0 2.7842354201062 13.776 0 4.7415554861452 19.968 0 0 chimp,human,macaque,marmoset,orangutan,panda, lincRNA processed_transcript A549@0.0052495,AG04450@0.012717,BJ@0.001463,GM12878@0.230028,H1HESC@0.009505,HELAS3@0.003209,HEPG2@0.015676,HMEC@0,HSMM@0.001244,HUVEC@0.037975,K562@0.0044555,MCF7@0.227151,NHEK@0,NHLF@0.012898,SKNSHRA@0.0151105, 0 0 0 0 ENSG00000248019.2 ENST00000500765.1 chr4:89630940-89651254 5 3205 17101 exonic 1.43 0 0,0,1 0 0,0,0 0 5.60078357990761 0 16.9903276131045 14.3726097889012 0 22.5691107644306 17.7315361674756 0 1 1 chimp,human,macaque,marmoset,orangutan, antisense antisense A549@0.129483,AG04450@0.193268,BJ@0.475544,GM12878@1.27218,H1HESC@0.156141,HELAS3@0.523088,HEPG2@0.666265,HMEC@0.240832,HSMM@0.183213,HUVEC@0.73894,K562@0.845554,MCF7@1.46437,NHEK@1.21426,NHLF@0.119494,SKNSHRA@0.342405, 0 0 0 0 ENSG00000248019.2 ENST00000511543.1 chr4:89642866-89649837 2 2451 4518 exonic 1.43 0 0,1,1 0 0,0,0 0 18.1892430278884 13.6 27.0171358629131 37.9309428950863 50.853 34.7478580171359 38.2580787959274 53.044 0 0 cat,chimp,guinea_pig,horse,human,macaque,orangutan, antisense antisense A549@0.129483,AG04450@0.193268,BJ@0.475544,GM12878@1.27218,H1HESC@0.156141,HELAS3@0.523088,HEPG2@0.666265,HMEC@0.240832,HSMM@0.183213,HUVEC@0.73894,K562@0.845554,MCF7@1.46437,NHEK@1.21426,NHLF@0.119494,SKNSHRA@0.342405, 0 0 0 0 ENSG00000251095.1 ENST00000506864.1 chr4:90472507-90612524 4 556 139455 intergenic -4.20 0 0,0,1 0 0,0,0 0 4.81522354881503 0 0 6.196436126349 0 4.80755395683453 8.14710121544584 0 0 0 chimp,dog,horse,human,macaque,marmoset,orangutan,pig,rabbit, antisense antisense A549@0.047387,AG04450@0.017813,BJ@0,GM12878@0.219971,H1HESC@0.895394,HELAS3@0.771675,HEPG2@1.73935,HMEC@0.891828,HSMM@0.006032,HUVEC@0.0831185,K562@0.0395915,MCF7@0.243428,NHEK@1.66793,NHLF@0.0132085,SKNSHRA@0.006247, 0 0 0 0 ENSG00000251095.1 ENST00000508021.1 chr4:90472541-90647654 5 562 174543 exonic 0.55 0 0,0,1 0 0,0,0 46.846975088968 5.81776410397438 0 67.423487544484 7.38386529393903 0 82.9110320284697 9.36817861501177 0 0 0 cat,chimp,cow,elephant,guinea_pig,horse,human,macaque,marmoset,mouse,orangutan,pig,rabbit, antisense antisense A549@0.047387,AG04450@0.017813,BJ@0,GM12878@0.219971,H1HESC@0.895394,HELAS3@0.771675,HEPG2@1.73935,HMEC@0.891828,HSMM@0.006032,HUVEC@0.0831185,K562@0.0395915,MCF7@0.243428,NHEK@1.66793,NHLF@0.0132085,SKNSHRA@0.006247, 0 0 0 0 ENSG00000251095.1 ENST00000512077.1 chr4:90509017-90581506 4 453 72030 intergenic 0 0 0,0,1 0 0,0,0 0 9.32260169373872 0 0 8.59080938497848 7.092 0 10.911231431348 9.675 0 0 chimp,cow,human,macaque,marmoset,orangutan, antisense antisense A549@0.047387,AG04450@0.017813,BJ@0,GM12878@0.219971,H1HESC@0.895394,HELAS3@0.771675,HEPG2@1.73935,HMEC@0.891828,HSMM@0.006032,HUVEC@0.0831185,K562@0.0395915,MCF7@0.243428,NHEK@1.66793,NHLF@0.0132085,SKNSHRA@0.006247, 0 0 0 0 ENSG00000251095.1 ENST00000509723.1 chr4:90509060-90575812 6 541 66201 intergenic 0.32 0 0,0,1 0 0,0,0 0 10.1434570474766 0 0 9.11090466911376 7.092 0 11.624461866135 9.675 0 0 chimp,horse,human,macaque,marmoset,orangutan,panda, antisense antisense A549@0.047387,AG04450@0.017813,BJ@0,GM12878@0.219971,H1HESC@0.895394,HELAS3@0.771675,HEPG2@1.73935,HMEC@0.891828,HSMM@0.006032,HUVEC@0.0831185,K562@0.0395915,MCF7@0.243428,NHEK@1.66793,NHLF@0.0132085,SKNSHRA@0.006247, 0 0 0 0 ENSG00000251095.1 ENST00000507916.1 chr4:90548935-90641190 3 466 91785 intergenic -2.48 0 0,1,0 0 0,0,0 0 2.87909789181239 0 0 4.89864356921065 3.585 0 5.94017540992537 3.765 0 0 chimp,dog,elephant,human,macaque,marmoset,orangutan, antisense antisense A549@0.047387,AG04450@0.017813,BJ@0,GM12878@0.219971,H1HESC@0.895394,HELAS3@0.771675,HEPG2@1.73935,HMEC@0.891828,HSMM@0.006032,HUVEC@0.0831185,K562@0.0395915,MCF7@0.243428,NHEK@1.66793,NHLF@0.0132085,SKNSHRA@0.006247, 0 0 0 0 ENSG00000251095.1 ENST00000513572.1 chr4:90602663-90615087 3 1813 10607 intergenic -2.91 0 0,1,0 1 0,0,0 0 0 0 2.59790402647545 3.05647214103894 0 5.47049089906233 3.80720279060998 0 0 0 chimp,dog,elephant,guinea_pig,horse,human,macaque,marmoset,orangutan,panda,pig,rabbit,rat, antisense antisense A549@0.047387,AG04450@0.017813,BJ@0,GM12878@0.219971,H1HESC@0.895394,HELAS3@0.771675,HEPG2@1.73935,HMEC@0.891828,HSMM@0.006032,HUVEC@0.0831185,K562@0.0395915,MCF7@0.243428,NHEK@1.66793,NHLF@0.0132085,SKNSHRA@0.006247, 0 0 0 0 ENSG00000247775.2 ENST00000513653.1 chr4:90757559-90763129 4 797 4767 exonic 5.93 0 0,0,0 0 0,0,0 0 0 143.099 3.60225846925972 8.88357457520453 94.171 4.80426599749059 9.98888189637088 99.569 0 0 chimp,horse,human,macaque,marmoset,orangutan, lincRNA processed_transcript A549@0,AG04450@0,BJ@0,GM12878@0.000886,H1HESC@0.011398,HELAS3@0.0097985,HEPG2@0.001031,HMEC@0.00619,HSMM@0,HUVEC@0.0105715,K562@0.025757,MCF7@0,NHEK@0.015601,NHLF@0,SKNSHRA@0.0485925, 0 0 0 0 ENSG00000247775.2 ENST00000501215.1 chr4:90757575-90761746 2 2644 1525 exonic 5.93 0 0,0,0 0 0,0,0 0 0 143.099 1.08585476550681 27.7691803278688 94.171 1.4481845688351 31.224262295082 99.569 0 0 chimp,cow,dog,horse,human,macaque,marmoset,orangutan,panda,pig,rabbit, lincRNA processed_transcript A549@0,AG04450@0,BJ@0,GM12878@0.000886,H1HESC@0.011398,HELAS3@0.0097985,HEPG2@0.001031,HMEC@0.00619,HSMM@0,HUVEC@0.0105715,K562@0.025757,MCF7@0,NHEK@0.015601,NHLF@0,SKNSHRA@0.0485925, 0 0 0 0 ENSG00000248984.1 ENST00000515111.1 chr4:92029174-92033941 2 268 4497 intronic 0 0 0,0,0 0 0,0,0 0 3.14342895263509 0 0 6.35645986213031 19.935 0 6.56482099177229 20.001 0 0 chimp,dog,horse,human,macaque,marmoset,orangutan,rabbit, antisense antisense A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000249052.1 ENST00000505511.1 chr4:92809037-92825486 4 573 15870 intergenic -6.95 0 0,1,0 0 0,0,0 0 17.0173913043478 0 5.96684118673647 15.4555765595463 2.151 6.30715532286213 16.1436042848141 2.259 0 0 chimp,guinea_pig,human,macaque,orangutan, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000249152.1 ENST00000502518.1 chr4:93189918-93198226 2 614 7692 intergenic -1.49 0 0,0,0 0 0,0,0 0 0 0 0 0.298361934477379 0 0 0.3100624024961 0 0 0 chimp,cow,dog,guinea_pig,horse,human,macaque,marmoset,orangutan,panda,pig,rabbit, lincRNA processed_transcript A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@8.53399,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000248627.1 ENST00000502570.1 chr4:93754836-93759993 2 347 4808 intronic -7.75 0 0,0,0 0 0,0,0 0 8.31114808652246 0 0 21.5996256239601 10.082 0 21.2928452579035 19.942 0 0 chimp,elephant,horse,human,macaque,marmoset,panda,rabbit, antisense antisense A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000250908.1 ENST00000505498.1 chr4:94239774-94240937 2 439 722 intronic -4.24 0 0,0,0 0 0,0,0 0 0 0 0 7.64542936288089 0 0 7.86703601108033 0 0 0 chimp,dog,elephant,horse,human,macaque,orangutan,panda,pig, antisense antisense A549@0,AG04450@0,BJ@0,GM12878@0.005315,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000246541.2 ENST00000501965.2 chr4:95038943-95128707 9 1033 88715 intergenic 4.80 0 0,1,0 0 0,0,0 86.0290416263311 1.81561179056529 182.114 166.503388189739 5.66237952995548 231.764 203.81316553727 10.4117567491405 230.455 0 0 cat,chimp,cow,dog,elephant,guinea_pig,horse,human,macaque,marmoset,mouse,orangutan,panda,pig,rabbit,rat, lincRNA processed_transcript A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000249951.1 ENST00000514304.1 chr4:95596396-95623721 2 213 27110 intergenic -1.36 0 0,0,1 0 0,0,0 0 21.9786425673183 0 0 25.6450756178532 0 0 26.7713021025452 0 1 1 chimp,human,macaque,marmoset,orangutan, lincRNA lincRNA A549@0.014438,AG04450@0.014998,BJ@0,GM12878@0.074106,H1HESC@0,HELAS3@0.058243,HEPG2@0.0759725,HMEC@0,HSMM@0,HUVEC@0.136624,K562@0,MCF7@0,NHEK@0.0271837,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000249599.1 ENST00000510795.1 chr4:95664951-95678684 3 508 13221 intergenic -1.71 0 0,0,0 0 0,0,0 0 10.7967627259663 87.39 51.6614173228346 7.88450192874972 85.72 59.3031496062992 10.06224945163 57.624 0 0 cat,chimp,cow,dog,elephant,guinea_pig,horse,human,macaque,marmoset,orangutan,panda,pig,rabbit, lincRNA lincRNA A549@0.683451,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0.036034,NHEK@0,NHLF@0,SKNSHRA@0.0444075, 0 0 0 0 ENSG00000248510.2 ENST00000513393.1 chr4:97231852-97285603 2 1685 52064 intergenic -1.68 0 0,0,0 0 0,0,0 0 7.32761601106331 0 0 12.6078864474493 0 0 13.6163952059004 0 0 0 chimp,cow,horse,human,macaque,marmoset,orangutan,panda, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0.001725,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0.133592,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000248510.2 ENST00000522173.1 chr4:97231883-97740015 4 795 507331 intergenic -1.57 0 0,0,0 0 0,0,0 20.6289308176101 5.85477922697411 0 2.10440251572327 8.07888932472094 0 8.45408805031447 9.3971923655365 0 0 0 cat,chimp,cow,dog,elephant,guinea_pig,horse,human,macaque,marmoset,orangutan,panda,pig, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0.001725,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0.133592,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000253170.1 ENST00000517407.1 chr4:98041852-98056210 2 523 13833 intergenic -16.50 0 0,0,0 0 0,0,0 0 8.62596689076845 0 0 6.84045398684306 92.036 4.64627151051625 4.97158967685968 87.659 0 0 cat,chimp,cow,dog,elephant,horse,human,macaque,marmoset,panda,pig,rabbit, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0.0055435,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000254044.1 ENST00000521680.1 chr4:98255786-98554962 3 497 298675 intronic 3.00 0 0,0,0 0 0,0,0 43.0362173038229 9.34062107642086 0 93.7002012072435 12.6868033816021 0 81.8189134808853 14.0083334728384 0 0 0 chimp,elephant,horse,human,macaque,marmoset,orangutan,pig,rat, processed_transcript processed_transcript A549@0,AG04450@0.006449,BJ@0.0012665,GM12878@0.0054935,H1HESC@0.145007,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0.007483,HUVEC@0.0107705,K562@0,MCF7@0,NHEK@0.0533503,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000251620.1 ENST00000508933.1 chr4:98288077-98411315 6 531 122697 intronic -2.18 0 0,0,1 0 0,0,0 0 6.82656462668199 0 24.864406779661 9.72736904732797 0 41.9717514124294 11.7957570274742 0 0 0 chimp,cow,dog,elephant,horse,human,macaque,marmoset,orangutan,rabbit, antisense antisense A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0.004225, 0 0 0 0 ENSG00000254044.1 ENST00000518105.1 chr4:98307111-98554974 5 686 247169 intronic -3.84 0 0,0,0 0 0,0,0 0 9.72568161864959 0 19.4416909620991 12.8748022608013 0 16.9402332361516 14.2106574853643 0 1 1 chimp,human,macaque,marmoset,orangutan, processed_transcript processed_transcript A549@0,AG04450@0.006449,BJ@0.0012665,GM12878@0.0054935,H1HESC@0.145007,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0.007483,HUVEC@0.0107705,K562@0,MCF7@0,NHEK@0.0533503,NHLF@0,SKNSHRA@0, 10 6 0 0 ENSG00000214559.3 ENST00000356499.2 chr4:99172839-99182781 2 395 9545 exonic -0.86 0 0,1,1 0 0,0,0 63.5848101265823 6.49952854897852 46.672 108.015189873418 15.738711367208 70.382 105.645569620253 20.2671555788371 73.42 0 1 chimp,human,macaque,marmoset, antisense antisense A549@0.010935,AG04450@0.037783,BJ@0.130698,GM12878@0,H1HESC@0.0368805,HELAS3@0.0526085,HEPG2@0.089867,HMEC@0.123767,HSMM@0.10056,HUVEC@0.131159,K562@0.017884,MCF7@0.0354495,NHEK@0.0425563,NHLF@0.0341855,SKNSHRA@0.0457595, 1 96 0 0 ENSG00000251523.1 ENST00000505408.1 chr4:99417515-99431086 4 485 13080 intronic 0 0 0,0,1 0 0,0,0 0 2.54793577981651 0 0 7.33868501529052 56.388 0 9.30840978593272 60.646 0 0 cat,chimp,cow,dog,human,marmoset,orangutan,panda, antisense antisense A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0.0092795, 0 0 0 0 ENSG00000246090.2 ENST00000500358.2 chr4:100010008-100222513 10 4815 207672 exonic 7.76 1 1,1,1 1 0,0,0 4.24506749740395 1.95255980584768 0 7.8116303219107 3.83841827497207 3.825 9.134994807892 10.5854231673023 3.975 1 1 chimp,human,macaque,marmoset,orangutan, lincRNA processed_transcript A549@0.0383145,AG04450@2.5355,BJ@3.53229,GM12878@0.271724,H1HESC@0.639543,HELAS3@0.0481825,HEPG2@0.321444,HMEC@0.621098,HSMM@0.1947,HUVEC@0.121407,K562@1.32847,MCF7@0.200651,NHEK@2.19902,NHLF@0.847974,SKNSHRA@0.851118, 0 0 0 0 ENSG00000246090.2 ENST00000499178.2 chr4:100010102-100023944 3 660 13178 intergenic 4.10 0 0,1,0 1 0,0,0 0 0 0 0 0.344589467293975 3.825 0 0.361891030505388 3.975 0 1 chimp,human,marmoset,orangutan, lincRNA processed_transcript A549@0.0383145,AG04450@2.5355,BJ@3.53229,GM12878@0.271724,H1HESC@0.639543,HELAS3@0.0481825,HEPG2@0.321444,HMEC@0.621098,HSMM@0.1947,HUVEC@0.121407,K562@1.32847,MCF7@0.200651,NHEK@2.19902,NHLF@0.847974,SKNSHRA@0.851118, 0 0 0 0 ENSG00000246090.2 ENST00000506160.1 chr4:100082941-100202398 5 519 118930 exonic 2.61 0 0,0,0 0 0,0,0 0 0.318750525519213 0 0 1.67579248297318 27.42 0 4.13719835197175 440.801 0 1 chimp,human,macaque,orangutan, lincRNA processed_transcript A549@0.0383145,AG04450@2.5355,BJ@3.53229,GM12878@0.271724,H1HESC@0.639543,HELAS3@0.0481825,HEPG2@0.321444,HMEC@0.621098,HSMM@0.1947,HUVEC@0.121407,K562@1.32847,MCF7@0.200651,NHEK@2.19902,NHLF@0.847974,SKNSHRA@0.851118, 0 0 0 0 ENSG00000246090.2 ENST00000506454.1 chr4:100082967-100184733 6 743 101013 exonic 6.67 0 0,0,0 0 0,0,0 0 0.128498312098443 0 0 1.249512438993 27.42 0 3.80411432191896 440.801 1 1 chimp,human,macaque,marmoset,orangutan, lincRNA processed_transcript A549@0.0383145,AG04450@2.5355,BJ@3.53229,GM12878@0.271724,H1HESC@0.639543,HELAS3@0.0481825,HEPG2@0.321444,HMEC@0.621098,HSMM@0.1947,HUVEC@0.121407,K562@1.32847,MCF7@0.200651,NHEK@2.19902,NHLF@0.847974,SKNSHRA@0.851118, 0 0 0 0 ENSG00000246090.2 ENST00000509295.1 chr4:100175086-100196208 6 909 20203 intergenic 6.68 1 0,0,1 0 0,0,0 0 0 0 0 0 0 0 0 0 1 1 chimp,human,macaque,marmoset,orangutan, lincRNA processed_transcript A549@0.0383145,AG04450@2.5355,BJ@3.53229,GM12878@0.271724,H1HESC@0.639543,HELAS3@0.0481825,HEPG2@0.321444,HMEC@0.621098,HSMM@0.1947,HUVEC@0.121407,K562@1.32847,MCF7@0.200651,NHEK@2.19902,NHLF@0.847974,SKNSHRA@0.851118, 0 0 0 0 ENSG00000246090.2 ENST00000510764.1 chr4:100188828-100196208 3 384 6992 intergenic -4.74 1 0,0,1 0 0,0,0 0 0 0 0 0 0 0 0 0 0 0 chimp,human,macaque,marmoset,orangutan,pig, lincRNA processed_transcript A549@0.0383145,AG04450@2.5355,BJ@3.53229,GM12878@0.271724,H1HESC@0.639543,HELAS3@0.0481825,HEPG2@0.321444,HMEC@0.621098,HSMM@0.1947,HUVEC@0.121407,K562@1.32847,MCF7@0.200651,NHEK@2.19902,NHLF@0.847974,SKNSHRA@0.851118, 0 0 0 0 ENSG00000246090.2 ENST00000509939.1 chr4:100212093-100222455 4 673 9683 exonic 7.76 1 0,0,1 0 0,0,0 0 0 0 0 0 8.976 0 0.535267995455954 16.691 0 0 cat,chimp,horse,human,macaque,marmoset,orangutan,panda, lincRNA processed_transcript A549@0.0383145,AG04450@2.5355,BJ@3.53229,GM12878@0.271724,H1HESC@0.639543,HELAS3@0.0481825,HEPG2@0.321444,HMEC@0.621098,HSMM@0.1947,HUVEC@0.121407,K562@1.32847,MCF7@0.200651,NHEK@2.19902,NHLF@0.847974,SKNSHRA@0.851118, 0 0 0 0 ENSG00000248676.1 ENST00000508578.1 chr4:100515956-100547070 4 355 30753 exonic -3.00 0 0,0,0 0 0,0,0 0 19.7349526875427 0 44.2478873239437 25.8909049523624 0 45.6619718309859 30.6185412805255 0 0 0 cat,chimp,cow,elephant,horse,human,macaque,marmoset,mouse,orangutan,panda,pig,rat, antisense antisense A549@0,AG04450@0,BJ@0,GM12878@0.026117,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0.0056005,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000245322.2 ENST00000514624.1 chr4:100871163-100887550 2 588 15797 exonic -4.71 0 0,1,0 0 0,0,0 23.2125850340136 6.53288599101095 142.618 33.0510204081633 12.6304994619231 254.554 40.8503401360544 12.2195353548142 188.097 0 0 chimp,cow,dog,human,macaque,marmoset,orangutan,panda,rabbit, antisense antisense A549@0,AG04450@0.055016,BJ@0.0668075,GM12878@0.0372585,H1HESC@0,HELAS3@0.0058765,HEPG2@0,HMEC@0,HSMM@0.05033,HUVEC@0,K562@0.0237335,MCF7@0.0138595,NHEK@0.011758,NHLF@0.0344955,SKNSHRA@0.045619, 0 0 0 0 ENSG00000245322.2 ENST00000507494.1 chr4:100871647-100958799 5 764 86380 intergenic 3.66 0 0,1,0 0 0,0,0 28.0104712041885 1.86847649918963 191.901 47.0301047120419 3.70483908312109 256.88 71.1243455497382 8.22272516786293 186.382 0 0 chimp,cow,dog,horse,human,macaque,marmoset,opossum,orangutan,panda,rabbit, antisense antisense A549@0,AG04450@0.055016,BJ@0.0668075,GM12878@0.0372585,H1HESC@0,HELAS3@0.0058765,HEPG2@0,HMEC@0,HSMM@0.05033,HUVEC@0,K562@0.0237335,MCF7@0.0138595,NHEK@0.011758,NHLF@0.0344955,SKNSHRA@0.045619, 0 0 0 0 ENSG00000245322.2 ENST00000501976.2 chr4:100871680-100958862 4 465 86711 intergenic -0.01 0 0,1,0 0 0,0,0 12.8688172043011 1.93826619460045 200.877 46.894623655914 3.76824163024299 262.948 94.0559139784946 8.27648164592727 187.778 0 0 cow,dog,elephant,horse,human,macaque,marmoset,mouse,orangutan,panda,rabbit, antisense antisense A549@0,AG04450@0.055016,BJ@0.0668075,GM12878@0.0372585,H1HESC@0,HELAS3@0.0058765,HEPG2@0,HMEC@0,HSMM@0.05033,HUVEC@0,K562@0.0237335,MCF7@0.0138595,NHEK@0.011758,NHLF@0.0344955,SKNSHRA@0.045619, 0 0 0 0 ENSG00000245322.2 ENST00000515026.1 chr4:100929228-101116256 6 758 186260 encompassing -0.01 0 0,1,0 0 0,0,0 0 5.91679372919575 25.732 40.7401055408971 8.10229786320198 13.981 91.8060686015831 11.230086975196 14.792 0 0 cat,chimp,cow,dog,elephant,horse,human,macaque,marmoset,orangutan,panda,rabbit, antisense antisense A549@0,AG04450@0.055016,BJ@0.0668075,GM12878@0.0372585,H1HESC@0,HELAS3@0.0058765,HEPG2@0,HMEC@0,HSMM@0.05033,HUVEC@0,K562@0.0237335,MCF7@0.0138595,NHEK@0.011758,NHLF@0.0344955,SKNSHRA@0.045619, 0 0 0 0 ENSG00000249710.1 ENST00000515782.1 chr4:101111190-101136662 5 521 24943 exonic 1.82 1 0,1,0 0 0,0,0 4.4126679462572 6.8091648959628 16.8 3.32821497120921 11.90815058333 70.428 6.93474088291747 13.1839393817905 74.845 0 0 cat,chimp,cow,dog,elephant,horse,human,macaque,marmoset,orangutan,pig,rabbit, antisense antisense A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000250223.1 ENST00000515728.1 chr4:101581436-101596270 4 820 14008 intergenic 1.21 0 0,0,0 0 0,0,0 0 2.33980582524272 58.14 0 0.855796687607082 98.862 0 1.3113221016562 95.664 0 0 chimp,horse,human,macaque,marmoset,orangutan, sense_intronic sense_intronic A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000251219.1 ENST00000514427.1 chr4:101699739-101712392 2 560 12091 intergenic -1.57 0 0,1,0 0 0,0,0 0 2.50831196757919 16.32 3.41428571428571 3.29650153006368 0 0 2.92837647837234 4.77 0 0 human, sense_intronic sense_intronic A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000251636.1 ENST00000515150.1 chr4:101733412-101735437 2 479 1544 intergenic -0.13 0 0,0,0 0 0,0,0 0 0 65.637 0 0 34.382 0 1.88860103626943 30.84 0 0 cat,chimp,dog,elephant,horse,human,macaque,orangutan, sense_intronic sense_intronic A549@0.0045125,AG04450@0,BJ@0,GM12878@0.0816885,H1HESC@0.0049895,HELAS3@0,HEPG2@0,HMEC@0.000836,HSMM@0,HUVEC@0,K562@0,MCF7@0.0039975,NHEK@0.017264,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000251309.1 ENST00000505091.1 chr4:102898051-102958060 3 600 59405 intronic 3.61 0 0,0,0 0 0,0,0 17.5266666666667 7.17543977779648 0 0 10.118121370255 6.792 1.215 11.2393906236849 7.08 0 0 cat,chimp,dog,elephant,horse,human,macaque,marmoset,orangutan,panda,rabbit, antisense antisense A549@0.005148,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0.0206985,HEPG2@0.0180945,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0.0037625, 0 0 0 0 ENSG00000248161.1 ENST00000502883.1 chr4:103339759-103352406 3 670 11973 intergenic 4.01 0 1,1,1 0 0,0,0 0 3.62465547481834 0 0 4.16687546980707 4.58 0 5.49402823018458 4.644 1 1 chimp,human,macaque,marmoset,orangutan, processed_transcript processed_transcript A549@1.43745,AG04450@0.108933,BJ@0.208769,GM12878@0.530137,H1HESC@1.26932,HELAS3@0.483807,HEPG2@0.0784705,HMEC@0.768695,HSMM@0.445787,HUVEC@0.603842,K562@0.415503,MCF7@0.224161,NHEK@1.01895,NHLF@0.215931,SKNSHRA@0.431925, 0 0 0 0 ENSG00000248161.1 ENST00000505709.1 chr4:103339759-103352439 2 606 12072 intergenic 4.01 0 1,1,1 0 0,0,0 0 3.59493041749503 0 0 4.13270377733598 4.58 0 5.44897282968854 4.644 1 1 chimp,human,macaque,marmoset,orangutan, processed_transcript processed_transcript A549@1.43745,AG04450@0.108933,BJ@0.208769,GM12878@0.530137,H1HESC@1.26932,HELAS3@0.483807,HEPG2@0.0784705,HMEC@0.768695,HSMM@0.445787,HUVEC@0.603842,K562@0.415503,MCF7@0.224161,NHEK@1.01895,NHLF@0.215931,SKNSHRA@0.431925, 0 0 0 0 ENSG00000248161.1 ENST00000512915.1 chr4:103339874-103371167 4 542 30745 intergenic 4.01 1 0,0,1 0 0,0,0 0 3.41528703854285 0 11.1291512915129 4.6723044397463 0 11.7933579335793 8.44361684826801 0 0 0 chimp,human,macaque,marmoset,orangutan,panda, processed_transcript processed_transcript A549@1.43745,AG04450@0.108933,BJ@0.208769,GM12878@0.530137,H1HESC@1.26932,HELAS3@0.483807,HEPG2@0.0784705,HMEC@0.768695,HSMM@0.445787,HUVEC@0.603842,K562@0.415503,MCF7@0.224161,NHEK@1.01895,NHLF@0.215931,SKNSHRA@0.431925, 0 0 0 0 ENSG00000248161.1 ENST00000506972.1 chr4:103339965-103352447 4 606 11870 intergenic 1.94 0 0,1,0 0 0,0,0 5.17326732673267 3.37438921651222 0 0 4.20303285593934 4.58 0 5.54170176916596 4.644 1 1 chimp,human,macaque,marmoset,orangutan, processed_transcript processed_transcript A549@1.43745,AG04450@0.108933,BJ@0.208769,GM12878@0.530137,H1HESC@1.26932,HELAS3@0.483807,HEPG2@0.0784705,HMEC@0.768695,HSMM@0.445787,HUVEC@0.603842,K562@0.415503,MCF7@0.224161,NHEK@1.01895,NHLF@0.215931,SKNSHRA@0.431925, 0 0 0 0 ENSG00000250009.1 ENST00000509494.1 chr4:103698194-103720732 5 1501 21029 exonic 4.06 0 0,1,0 0 0,0,0 21.3157894736842 79.5582291121784 0 34.9473684210526 89.8967140615341 0 38.0772818121252 100.898853963574 0 1 1 chimp,human,macaque,marmoset,orangutan, lincRNA lincRNA A549@0.0014415,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0.0110865,HEPG2@0.029776,HMEC@0,HSMM@0,HUVEC@0,K562@0.001631,MCF7@0.0046595,NHEK@0,NHLF@0,SKNSHRA@0.0018465, 0 0 0 0 ENSG00000246560.2 ENST00000501133.2 chr4:103749212-103765232 2 881 15137 exonic 1.36 0 1,1,1 1 0,0,0 25.2326901248581 2.72114685869063 232.898 24.5198637911464 6.00072669617493 357.974 21.8149829738933 7.49316244962674 332.006 1 1 chimp,human,macaque,marmoset,orangutan, lincRNA processed_transcript A549@1.78959,AG04450@1.33924,BJ@1.67346,GM12878@1.54037,H1HESC@1.93101,HELAS3@2.66411,HEPG2@3.43119,HMEC@0.932072,HSMM@1.98487,HUVEC@1.78246,K562@7.61074,MCF7@1.64331,NHEK@1.69005,NHLF@1.58865,SKNSHRA@2.3407, 0 0 0 0 ENSG00000248740.1 ENST00000513793.1 chr4:104177316-104374815 4 434 197059 intergenic 6.83 0 0,0,0 0 0,0,0 0 0.865426090663203 0 0 1.86719205923099 0 48.1451612903226 3.23800486148818 0 0 0 chimp,cow,human,macaque,marmoset,orangutan, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0.0094725,HELAS3@0,HEPG2@0.032836,HMEC@0,HSMM@0,HUVEC@0,K562@0.005172,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000248740.1 ENST00000508099.1 chr4:104298160-104360898 4 523 62209 intergenic -2.84 0 0,0,0 0 0,0,0 0 1.08754360301564 0 0 2.37282386792908 0 51.2676864244742 4.95331865164205 0 0 0 chimp,cow,dog,horse,human,macaque,marmoset,orangutan,panda,rabbit, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0.0094725,HELAS3@0,HEPG2@0.032836,HMEC@0,HSMM@0,HUVEC@0,K562@0.005172,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000248740.1 ENST00000510200.1 chr4:104346199-104360885 4 413 14267 intergenic 3.62 0 0,0,0 0 0,0,0 0 3.00378495829537 24.8 0 3.21819583654588 23.934 50.5932203389831 11.0131772622135 28.115 1 1 chimp,human,macaque,marmoset,orangutan, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0.0094725,HELAS3@0,HEPG2@0.032836,HMEC@0,HSMM@0,HUVEC@0,K562@0.005172,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000251577.1 ENST00000512401.1 chr4:104469902-104514574 5 653 44011 intronic 5.68 0 0,0,0 0 0,0,0 0 4.36497693758379 0 0 18.8851196291836 0 0 65.3247369975688 0 0 0 chimp,cow,dog,elephant,horse,human,macaque,marmoset,orangutan,pig,rabbit, processed_transcript processed_transcript A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0.0140155,HEPG2@0.0287315,HMEC@0,HSMM@0,HUVEC@0,K562@0.0106265,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000251577.1 ENST00000502936.1 chr4:104469902-104545691 5 820 74961 intronic 5.68 0 0,0,0 0 0,0,0 0 2.56275930150345 0 3.36585365853659 11.2819199316978 0 3.39024390243902 38.7222288923574 0 0 0 cat,chimp,cow,dog,elephant,guinea_pig,horse,human,macaque,marmoset,mouse,orangutan,pig,rabbit, processed_transcript processed_transcript A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0.0140155,HEPG2@0.0287315,HMEC@0,HSMM@0,HUVEC@0,K562@0.0106265,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000250920.1 ENST00000509399.1 chr4:104472084-104480284 4 826 7368 intergenic 0.73 0 0,0,0 0 0,0,0 0 0 0 0 0 3.585 0 0 3.765 1 1 chimp,human,macaque,marmoset,orangutan, lincRNA lincRNA A549@0.0092705,AG04450@0,BJ@0,GM12878@0,H1HESC@0.006488,HELAS3@0.943834,HEPG2@0.289206,HMEC@0.004933,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000249614.1 ENST00000510505.1 chr4:104882773-104958080 4 808 74493 intergenic 0.02 0 0,0,0 0 0,0,0 78.7277227722772 2.61287637764622 0 97.0123762376238 5.98934128038876 0 97.9814356435644 7.36905481051911 0 0 1 chimp,human,macaque,orangutan, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000251170.1 ENST00000514327.1 chr4:105151537-105332192 6 561 180084 intergenic -1.19 0 0,0,0 0 0,0,0 70.4099821746881 8.32110015326181 0 125.705882352941 9.48090890917572 0 110.001782531194 10.8827602674308 0 0 0 cat,chimp,cow,dog,elephant,guinea_pig,horse,human,macaque,marmoset,mouse,opossum,orangutan,panda,pig,rabbit,rat, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000251170.1 ENST00000505680.1 chr4:105154934-105257190 4 512 101738 intergenic -0.88 0 0,0,0 0 0,0,0 0 5.38013328353221 0 0 7.09692543592365 0 0 7.92151408519924 0 0 0 cat,chimp,guinea_pig,human,macaque,marmoset,orangutan,panda, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000245384.1 ENST00000500179.1 chr4:105412122-105618749 10 2958 203651 exonic 1.41 0 0,1,1 1 0,0,0 30.1693711967546 23.9345547038807 234.558 44.0591615956727 21.3783973562614 233.88 53.0601757944557 24.5080898203299 268.234 0 0 cat,chimp,cow,dog,elephant,guinea_pig,horse,human,macaque,marmoset,mouse,opossum,orangutan,pig,rabbit,rat, antisense antisense A549@0,AG04450@0,BJ@0,GM12878@0.016617,H1HESC@0,HELAS3@0,HEPG2@0.000987,HMEC@0,HSMM@0,HUVEC@0,K562@0.000902,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000250670.1 ENST00000508358.1 chr4:105478117-105490034 4 543 11368 intergenic -1.82 0 0,1,0 0 0,0,0 14.5690607734807 3.91775158339198 0 11.0718232044199 11.7275686136524 18.298 11.4254143646409 12.8583743842365 24.714 1 1 chimp,human,macaque,marmoset,orangutan, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0.0038265,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000248242.1 ENST00000515127.1 chr4:105575031-105887950 6 569 312340 intergenic -4.32 0 0,1,0 0 0,0,0 0 15.1637670487289 8.8 0 14.5989018377409 7.17 0 17.9673496830377 9.065 0 0 chimp,dog,human,macaque,marmoset,orangutan,panda, processed_transcript processed_transcript A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0.0190875,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000248373.1 ENST00000506148.1 chr4:105828514-106038002 4 468 209014 intergenic 1.57 0 0,0,0 0 0,0,0 6.39316239316239 9.34026907288507 284.592 12.8226495726496 9.3685590438918 45.198 13.5 13.2792540212617 45.476 0 0 cat,chimp,cow,dog,guinea_pig,horse,human,macaque,marmoset,mouse,orangutan,rabbit,rat, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0.033366,H1HESC@0.0038345,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0.0156235,HUVEC@0,K562@0,MCF7@0.03032,NHEK@0.0100203,NHLF@0,SKNSHRA@0.004201, 0 0 0 0 ENSG00000248373.1 ENST00000515649.1 chr4:105828563-105891241 4 444 62228 intergenic 0 0 0,0,1 0 0,0,0 0 10.3171401941248 45.592 0 8.06355659831587 43.214 0 9.82422703606094 43.468 1 1 chimp,human,macaque,marmoset,orangutan, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0.033366,H1HESC@0.0038345,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0.0156235,HUVEC@0,K562@0,MCF7@0.03032,NHEK@0.0100203,NHLF@0,SKNSHRA@0.004201, 0 0 0 0 ENSG00000248373.1 ENST00000506386.1 chr4:105894869-106041157 4 537 145745 intergenic 1.57 0 0,0,1 0 0,0,0 5.57169459962756 8.98989330680298 0 11.1750465549348 9.86110672750351 0 11.7653631284916 14.4950084050911 0 0 0 cat,chimp,cow,elephant,guinea_pig,human,macaque,marmoset,orangutan,panda,pig,rabbit, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0.033366,H1HESC@0.0038345,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0.0156235,HUVEC@0,K562@0,MCF7@0.03032,NHEK@0.0100203,NHLF@0,SKNSHRA@0.004201, 0 0 0 0 ENSG00000251259.1 ENST00000504082.1 chr4:106058437-106061776 2 547 2790 intergenic -3.32 0 0,0,1 0 0,0,0 0 0 7.71 136.062157221207 9.80430107526882 10.686 251.460694698355 10.6820788530466 10.582 0 0 cat,chimp,cow,dog,elephant,guinea_pig,horse,human,macaque,marmoset,mouse,opossum,orangutan,panda,pig,rabbit,rat, lincRNA lincRNA A549@0.355828,AG04450@0.579822,BJ@0.326627,GM12878@2.0566,H1HESC@1.45647,HELAS3@0.258165,HEPG2@0.309157,HMEC@0.544458,HSMM@0.185144,HUVEC@0.732061,K562@1.10568,MCF7@1.30262,NHEK@0.489881,NHLF@0.233886,SKNSHRA@0.460655, 0 0 0 0 ENSG00000251586.1 ENST00000515414.1 chr4:106092511-106099220 5 532 6169 intronic 0.39 1 0,0,1 0 0,0,0 0 0 0 0 4.96304101150916 0 0 7.58032095963689 0 1 1 chimp,human,macaque,marmoset,orangutan, antisense antisense A549@0.0080845,AG04450@0.005513,BJ@0,GM12878@0,H1HESC@0.0710175,HELAS3@0,HEPG2@0.0081035,HMEC@0,HSMM@0.0038315,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000250522.1 ENST00000514879.1 chr4:106461347-106473512 4 568 11591 intergenic 2.27 0 0,0,0 0 0,0,0 0 15.6983866793202 63.724 8.72359154929577 19.1659045811405 114.914 8.41725352112676 17.2184453455267 145.247 0 0 cat,chimp,cow,human,macaque,marmoset,orangutan,panda,pig, antisense antisense A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0.0070295,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000249885.1 ENST00000512262.1 chr4:106482748-106491395 3 453 8190 intronic -3.07 1 0,0,1 0 0,0,0 0 1.88034188034188 0 0 10.791452991453 6.382 0 14.498778998779 27.184 1 1 chimp,human,macaque,marmoset,orangutan, sense_intronic sense_intronic A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000249823.1 ENST00000510406.1 chr4:106616681-106629242 6 738 11813 exonic -0.37 0 0,1,0 0 0,0,0 72.1951219512195 7.82544654194531 5.994 61.6355013550135 11.9885719123 9.144 70.4105691056911 15.8812325404216 11.727 0 0 chimp,guinea_pig,horse,human,macaque,orangutan, processed_transcript processed_transcript A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0.003301,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000249823.1 ENST00000508961.1 chr4:106621291-106629250 3 449 7506 exonic -0.37 0 0,0,0 0 0,0,0 0 0 92.442 0 7.52571276312283 79.731 0 10.7958966160405 91.046 0 0 cat,chimp,cow,guinea_pig,human,macaque,marmoset,orangutan, processed_transcript processed_transcript A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0.003301,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000251175.1 ENST00000504955.1 chr4:106667402-106748329 4 385 80536 intronic -2.98 0 0,0,0 0 0,0,0 0 7.38211483063475 41.888 4.50909090909091 10.0634871361875 54.333 4.81818181818182 13.3920731101619 46.132 0 0 chimp,human,macaque,marmoset,orangutan,pig, antisense antisense A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000251175.1 ENST00000506527.1 chr4:106736302-106748313 6 475 11526 intronic -1.80 1 0,0,0 0 0,0,0 0 13.1609404823876 41.888 21.8631578947368 23.9416970327954 54.333 22.5284210526316 24.8938920701024 46.132 0 0 chimp,dog,horse,human,macaque,marmoset,orangutan,panda,rabbit, antisense antisense A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000251175.1 ENST00000509003.1 chr4:106736307-106748326 4 338 11675 intronic -1.80 1 0,0,0 0 0,0,0 0 12.9929764453961 41.888 30.7248520710059 23.6361456102784 54.333 31.6597633136095 24.5761884368308 46.132 0 0 chimp,human,macaque,marmoset,orangutan,panda, antisense antisense A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000250740.1 ENST00000511059.1 chr4:106848217-106850735 2 455 2061 exonic -3.91 1 0,0,0 0 0,0,0 26.3032967032967 2.24357108199903 0 50.3758241758242 2.89665211062591 11.724 77.2923076923077 4.87627365356623 10.645 0 0 cat,chimp,cow,dog,elephant,guinea_pig,horse,human,macaque,marmoset,mouse,opossum,orangutan,panda,pig,rabbit, antisense antisense A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0.005114,HEPG2@0.004761,HMEC@0,HSMM@0.0045025,HUVEC@0,K562@0,MCF7@0,NHEK@0.0109333,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000250740.1 ENST00000512514.1 chr4:106848219-106853879 2 481 5177 exonic -3.79 1 0,0,0 0 0,0,0 133.330561330561 7.6105852810508 32.928 171.110187110187 12.2837550705042 42.169 197.201663201663 11.8495267529457 37.415 0 0 cat,chimp,cow,dog,elephant,guinea_pig,horse,human,macaque,marmoset,mouse,opossum,orangutan,panda,pig,rabbit, antisense antisense A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0.005114,HEPG2@0.004761,HMEC@0,HSMM@0.0045025,HUVEC@0,K562@0,MCF7@0,NHEK@0.0109333,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000249635.1 ENST00000513220.1 chr4:106924474-106943635 4 3522 15633 exonic 2.09 0 0,0,1 0 0,0,0 0 2.61466129341777 0 0 5.65547239813216 3.472 0 6.11136698010619 3.514 1 1 chimp,human,macaque,marmoset,orangutan, antisense antisense A549@0.0379615,AG04450@0.035473,BJ@0.035909,GM12878@0.0774305,H1HESC@0.0487345,HELAS3@0.085116,HEPG2@0.0849865,HMEC@0.004645,HSMM@0.00492,HUVEC@0.053964,K562@0.043419,MCF7@0.029477,NHEK@0.058147,NHLF@0.0055275,SKNSHRA@0.104351, 0 0 0 0 ENSG00000250298.1 ENST00000507153.1 chr4:107279555-107288359 2 204 8598 intergenic 0 0 0,0,0 0 0,1,1 165.78431372549 23.6879506862061 14.579 264.524509803922 47.723075133752 74.43 300.848039215686 46.599441730635 75.143 0 0 cat,chimp,cow,dog,elephant,guinea_pig,horse,human,macaque,marmoset,mouse,orangutan,panda,rabbit, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0.0257665,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000249613.1 ENST00000504132.1 chr4:107354781-107374605 4 517 19301 intergenic -1.94 0 0,0,0 0 0,0,0 0 0 0 0 4.85270193254236 0 9.70986460348163 7.12336148386094 0 0 0 chimp,cow,elephant,human,macaque,marmoset,orangutan,rabbit, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000251081.1 ENST00000508555.1 chr4:108179857-108223027 2 555 42613 intronic -3.15 0 0,0,0 0 0,0,0 0 7.69359115762795 8.97 0 12.4234153896698 11.854 6.90990990990991 13.4834440194307 34.54 0 0 cat,chimp,dog,guinea_pig,horse,human,macaque,marmoset,orangutan,pig, lincRNA lincRNA A549@0,AG04450@0.011578,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@4.37917,NHEK@0,NHLF@0,SKNSHRA@2.88433, 0 0 0 0 ENSG00000245293.2 ENST00000499098.1 chr4:108784635-108853275 7 2803 65825 exonic 13.95 0 0,1,0 0 0,0,0 27.0410274705673 20.1861906570452 7.923 30.7474134855512 19.1463881503988 7.391 37.1773100249732 23.2658868211166 8.569 0 0 chimp,dog,human,macaque,marmoset,orangutan,panda, antisense antisense A549@0,AG04450@0,BJ@0.011379,GM12878@0,H1HESC@0,HELAS3@0.0344665,HEPG2@0.011841,HMEC@0.016741,HSMM@0,HUVEC@0,K562@0.010984,MCF7@0.0007155,NHEK@0.008305,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000245293.2 ENST00000513071.1 chr4:108807873-108899955 5 633 91441 exonic 1.25 0 0,1,1 0 0,0,0 193.560821484992 20.1932174844982 8.51 169.173775671406 17.9067704858871 12.95 170.083728278041 22.2079154864886 13.135 0 0 cat,chimp,cow,dog,elephant,horse,human,macaque,marmoset,mouse,orangutan,panda,platypus, antisense antisense A549@0,AG04450@0,BJ@0.011379,GM12878@0,H1HESC@0,HELAS3@0.0344665,HEPG2@0.011841,HMEC@0.016741,HSMM@0,HUVEC@0,K562@0.010984,MCF7@0.0007155,NHEK@0.008305,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000249604.1 ENST00000512428.1 chr4:108857187-108862411 4 3143 2075 exonic -4.47 0 0,0,1 0 0,0,0 0 6.67951807228916 0 9.44766146993318 15.4467469879518 0 11.3350302258988 19.2592771084337 0 0 1 chimp,human,marmoset,orangutan, antisense antisense A549@0,AG04450@0,BJ@0,GM12878@0.0006405,H1HESC@0.0018695,HELAS3@0.015393,HEPG2@0.0031215,HMEC@0,HSMM@0,HUVEC@0.0047665,K562@0.0192435,MCF7@0.0006535,NHEK@0.000845333,NHLF@0.000613,SKNSHRA@0, 0 0 0 0 ENSG00000232021.2 ENST00000436413.1 chr4:109088681-109097582 3 1042 7855 exonic 7.00 1 0,1,1 0 0,1,0 243.094049904031 57.9436028007639 21.576 320.503838771593 116.466199872693 62.127 314.042226487524 102.254487587524 53.82 0 0 chimp,cow,dog,elephant,guinea_pig,horse,human,macaque,marmoset,mouse,orangutan,panda,rabbit,rat, antisense antisense A549@0,AG04450@0.009614,BJ@0.0119595,GM12878@0.0221225,H1HESC@0.016493,HELAS3@0.004473,HEPG2@0,HMEC@0,HSMM@0.001357,HUVEC@0.000795,K562@1.00529,MCF7@0.003148,NHEK@0.00161467,NHLF@0.0104785,SKNSHRA@0.150149, 0 0 0 0 ENSG00000232021.2 ENST00000508266.1 chr4:109092927-109094924 2 557 1438 intergenic 2.00 0 0,0,1 0 0,1,0 290.445242369838 33.6029207232267 37.944 445.436265709156 89.6947148817803 153.912 463.197486535009 83.663421418637 148.812 0 0 chimp,cow,dog,elephant,guinea_pig,human,macaque,marmoset,mouse,orangutan,panda,pig,rabbit,rat, antisense antisense A549@0,AG04450@0.009614,BJ@0.0119595,GM12878@0.0221225,H1HESC@0.016493,HELAS3@0.004473,HEPG2@0,HMEC@0,HSMM@0.001357,HUVEC@0.000795,K562@1.00529,MCF7@0.003148,NHEK@0.00161467,NHLF@0.0104785,SKNSHRA@0.150149, 0 0 0 0 ENSG00000232021.2 ENST00000512637.1 chr4:109093276-109097582 3 1672 2630 intergenic 0.78 1 0,0,1 0 0,1,0 111.672248803828 42.8030418250951 82.212 149.61543062201 86.4577946768061 476.176 136.348684210526 87.7802281368821 169.371 0 0 chimp,cow,dog,human,macaque,marmoset,orangutan,panda, antisense antisense A549@0,AG04450@0.009614,BJ@0.0119595,GM12878@0.0221225,H1HESC@0.016493,HELAS3@0.004473,HEPG2@0,HMEC@0,HSMM@0.001357,HUVEC@0.000795,K562@1.00529,MCF7@0.003148,NHEK@0.00161467,NHLF@0.0104785,SKNSHRA@0.150149, 0 0 0 0 ENSG00000232021.2 ENST00000507799.1 chr4:109093855-109121076 2 457 26762 intergenic -4.53 0 0,1,1 0 0,0,0 41.035010940919 35.5229056124355 71.052 27.0984682713348 35.4781032807712 166.166 27.4201312910285 38.0107988939541 167.202 0 0 cat,chimp,cow,dog,human,macaque,marmoset,orangutan,pig, antisense antisense A549@0,AG04450@0.009614,BJ@0.0119595,GM12878@0.0221225,H1HESC@0.016493,HELAS3@0.004473,HEPG2@0,HMEC@0,HSMM@0.001357,HUVEC@0.000795,K562@1.00529,MCF7@0.003148,NHEK@0.00161467,NHLF@0.0104785,SKNSHRA@0.150149, 0 0 0 0 ENSG00000232021.2 ENST00000506314.1 chr4:109093865-109097584 2 3358 359 intergenic 2.00 1 1,1,1 0 0,1,0 74.8951756998213 134.598885793872 67.332 106.677188802859 199.573816155989 160.086 103.745384157236 166.047353760446 161.252 1 1 chimp,human,macaque,marmoset,orangutan, antisense retained_intron A549@0,AG04450@0.009614,BJ@0.0119595,GM12878@0.0221225,H1HESC@0.016493,HELAS3@0.004473,HEPG2@0,HMEC@0,HSMM@0.001357,HUVEC@0.000795,K562@1.00529,MCF7@0.003148,NHEK@0.00161467,NHLF@0.0104785,SKNSHRA@0.150149, 0 0 0 0 ENSG00000232021.2 ENST00000508286.1 chr4:109094575-109097586 3 441 2566 intergenic -2.92 1 0,1,1 1 0,1,0 231.573696145125 57.8565861262666 48.321 258.315192743764 94.7525331254871 89.515 235.673469387755 94.8012470771629 76.591 0 0 chimp,cow,dog,elephant,horse,human,macaque,marmoset,orangutan,panda,rabbit, antisense antisense A549@0,AG04450@0.009614,BJ@0.0119595,GM12878@0.0221225,H1HESC@0.016493,HELAS3@0.004473,HEPG2@0,HMEC@0,HSMM@0.001357,HUVEC@0.000795,K562@1.00529,MCF7@0.003148,NHEK@0.00161467,NHLF@0.0104785,SKNSHRA@0.150149, 0 0 0 0 ENSG00000232021.2 ENST00000512129.1 chr4:109097444-109177992 3 427 80117 intergenic 3.68 1 0,0,1 0 0,1,0 229.929742388759 20.4815457393562 83.443 229.475409836066 20.8227841781395 87.952 206.135831381733 35.9605951296229 72.892 0 0 cat,chimp,cow,dog,elephant,horse,human,macaque,marmoset,mouse,orangutan,panda,pig,rabbit,rat, antisense antisense A549@0,AG04450@0.009614,BJ@0.0119595,GM12878@0.0221225,H1HESC@0.016493,HELAS3@0.004473,HEPG2@0,HMEC@0,HSMM@0.001357,HUVEC@0.000795,K562@1.00529,MCF7@0.003148,NHEK@0.00161467,NHLF@0.0104785,SKNSHRA@0.150149, 0 0 0 0 ENSG00000234492.3 ENST00000450161.2 chr4:109459346-109541553 5 3706 78493 intergenic 1.35 0 0,1,0 1 0,1,0 6.71883432271991 24.5139056985973 0 6.40232056125202 23.4899799982164 19.909 8.04614139233675 28.4756984699273 27.028 1 1 chimp,human,macaque,marmoset,orangutan, lincRNA processed_transcript A549@0.0095565,AG04450@0.014804,BJ@0.0041015,GM12878@0.0244265,H1HESC@0.012539,HELAS3@0.009706,HEPG2@0.011607,HMEC@0.00694,HSMM@0.01836,HUVEC@0.0171785,K562@0.0773755,MCF7@0.0036585,NHEK@0.00331433,NHLF@0.004924,SKNSHRA@0.082441, 0 0 0 0 ENSG00000234492.3 ENST00000507248.1 chr4:109459346-109541553 4 3709 78492 intergenic 1.35 0 0,1,0 1 0,1,0 6.71339983823133 24.5142180094787 0 6.39714208681585 23.4902792641288 19.909 8.03963332434618 28.4760612546502 27.028 1 1 chimp,human,macaque,marmoset,orangutan, lincRNA processed_transcript A549@0.0095565,AG04450@0.014804,BJ@0.0041015,GM12878@0.0244265,H1HESC@0.012539,HELAS3@0.009706,HEPG2@0.011607,HMEC@0.00694,HSMM@0.01836,HUVEC@0.0171785,K562@0.0773755,MCF7@0.0036585,NHEK@0.00331433,NHLF@0.004924,SKNSHRA@0.082441, 0 0 0 0 ENSG00000234492.3 ENST00000506795.1 chr4:109461324-109541585 4 1132 79123 intergenic -11.72 0 0,1,1 1 0,1,0 21.9964664310954 24.3187189565613 0 20.4143109540636 23.3068513580122 19.909 20.8666077738516 28.2567774224941 27.028 0 0 chimp,dog,elephant,guinea_pig,human,macaque,marmoset,mouse,orangutan,rabbit,rat, lincRNA processed_transcript A549@0.0095565,AG04450@0.014804,BJ@0.0041015,GM12878@0.0244265,H1HESC@0.012539,HELAS3@0.009706,HEPG2@0.011607,HMEC@0.00694,HSMM@0.01836,HUVEC@0.0171785,K562@0.0773755,MCF7@0.0036585,NHEK@0.00331433,NHLF@0.004924,SKNSHRA@0.082441, 0 0 0 0 ENSG00000234492.3 ENST00000509984.1 chr4:109477257-109541551 3 1177 63113 intergenic 2.77 0 0,1,0 1 0,1,0 16.4146134239592 29.5672365439767 0 11.2455395072217 28.4015812907008 19.909 11.6542056074766 34.5663650911857 27.028 0 0 chimp,dog,horse,human,macaque,marmoset,orangutan,panda,pig, lincRNA retained_intron A549@0.0095565,AG04450@0.014804,BJ@0.0041015,GM12878@0.0244265,H1HESC@0.012539,HELAS3@0.009706,HEPG2@0.011607,HMEC@0.00694,HSMM@0.01836,HUVEC@0.0171785,K562@0.0773755,MCF7@0.0036585,NHEK@0.00331433,NHLF@0.004924,SKNSHRA@0.082441, 0 0 0 0 ENSG00000234492.3 ENST00000510212.1 chr4:109511519-109541616 4 558 29533 intergenic 4.36 0 0,1,1 1 0,0,0 0 26.8364879964785 0 0 25.3263129380693 19.909 3.24910394265233 36.5265296448041 25.215 0 0 chimp,dog,horse,human,macaque,marmoset,orangutan,panda, lincRNA processed_transcript A549@0.0095565,AG04450@0.014804,BJ@0.0041015,GM12878@0.0244265,H1HESC@0.012539,HELAS3@0.009706,HEPG2@0.011607,HMEC@0.00694,HSMM@0.01836,HUVEC@0.0171785,K562@0.0773755,MCF7@0.0036585,NHEK@0.00331433,NHLF@0.004924,SKNSHRA@0.082441, 0 0 0 0 ENSG00000246774.1 ENST00000500526.1 chr4:110224191-110237291 3 1948 11148 intergenic 3.31 0 0,0,0 0 0,0,0 9.65297741273101 11.8632938643703 34 11.2032854209446 10.3530678148547 69.129 13.0374743326489 12.7516146393972 61.293 0 1 chimp,human,orangutan, lincRNA processed_transcript A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0.0475345,HELAS3@0.0964825,HEPG2@0.011185,HMEC@0,HSMM@0.0239675,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000247950.2 ENST00000499713.2 chr4:110268631-110335566 8 1425 65496 intergenic 4.19 0 0,0,0 0 0,0,0 0 18.229571271528 0 5.36701754385965 17.6740564309271 0 6.75929824561404 20.4682728716257 0 0 0 chimp,dog,horse,human,macaque,marmoset,orangutan,panda, lincRNA processed_transcript A549@0.432801,AG04450@0.351704,BJ@0.349149,GM12878@0.558379,H1HESC@0.722776,HELAS3@0.246311,HEPG2@0.45296,HMEC@0.072736,HSMM@0.298191,HUVEC@0.685807,K562@0.638867,MCF7@0.488362,NHEK@0.220694,NHLF@0.424747,SKNSHRA@0.569276, 0 0 0 0 ENSG00000247950.2 ENST00000505895.1 chr4:110278435-110354939 8 792 75698 exonic -6.58 0 0,1,0 1 0,0,0 0 13.1719067874977 86.703 12.1969696969697 12.597955031837 110.432 10.3143939393939 14.0802002694919 106.186 0 0 chimp,horse,human,macaque,marmoset,orangutan, lincRNA processed_transcript A549@0.432801,AG04450@0.351704,BJ@0.349149,GM12878@0.558379,H1HESC@0.722776,HELAS3@0.246311,HEPG2@0.45296,HMEC@0.072736,HSMM@0.298191,HUVEC@0.685807,K562@0.638867,MCF7@0.488362,NHEK@0.220694,NHLF@0.424747,SKNSHRA@0.569276, 0 0 0 0 ENSG00000247950.2 ENST00000510971.1 chr4:110303551-110354920 6 548 50811 intergenic -2.28 0 0,1,0 1 0,0,0 0 9.20519178917951 80.794 3.06569343065693 10.1766546613922 118.412 1.41970802919708 12.187990789396 113.577 1 1 chimp,human,macaque,marmoset,orangutan, lincRNA processed_transcript A549@0.432801,AG04450@0.351704,BJ@0.349149,GM12878@0.558379,H1HESC@0.722776,HELAS3@0.246311,HEPG2@0.45296,HMEC@0.072736,HSMM@0.298191,HUVEC@0.685807,K562@0.638867,MCF7@0.488362,NHEK@0.220694,NHLF@0.424747,SKNSHRA@0.569276, 0 0 0 0 ENSG00000247950.2 ENST00000499359.2 chr4:110351119-110354973 3 954 2896 exonic -4.20 0 0,1,1 1 0,0,0 0 11.8922651933702 94.478 25.0943396226415 2.94060773480663 97.427 21.6111111111111 3.85497237569061 95.422 1 1 chimp,human,macaque,marmoset,orangutan, lincRNA processed_transcript A549@0.432801,AG04450@0.351704,BJ@0.349149,GM12878@0.558379,H1HESC@0.722776,HELAS3@0.246311,HEPG2@0.45296,HMEC@0.072736,HSMM@0.298191,HUVEC@0.685807,K562@0.638867,MCF7@0.488362,NHEK@0.220694,NHLF@0.424747,SKNSHRA@0.569276, 0 0 0 0 ENSG00000250511.1 ENST00000503998.1 chr4:111433644-111440661 4 1443 5568 exonic 0.63 0 0,0,0 0 0,0,0 23.8891198891199 5.85201149425287 31.014 28.1801801801802 8.09644396551724 39.157 36.8641718641719 10.401400862069 57.424 0 0 cat,chimp,horse,human,macaque,marmoset,orangutan,pig, antisense antisense A549@0,AG04450@0,BJ@0.003403,GM12878@0.004042,H1HESC@0,HELAS3@0,HEPG2@0.001885,HMEC@0,HSMM@0.0735945,HUVEC@0,K562@0,MCF7@0.002842,NHEK@0,NHLF@0.0040155,SKNSHRA@0, 0 0 0 0 ENSG00000250103.1 ENST00000513690.1 chr4:111516671-111536614 2 444 19497 intergenic -1.77 1 0,1,0 0 0,0,0 53.5135135135135 16.4657639636867 127.158 80.8851351351351 18.0765245935272 147.891 82.4189189189189 19.8093039954865 139.062 0 0 chimp,cow,dog,horse,human,macaque,marmoset,orangutan,panda,rabbit, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000250103.1 ENST00000503456.1 chr4:111524517-111536571 4 489 11559 intergenic 0 0 0,1,0 0 0,0,0 48.5889570552147 27.7734233065144 126.008 73.4417177914111 25.0435158750757 147.891 74.8343558282209 26.2828964443291 138.778 0 0 chimp,cow,elephant,horse,human,macaque,marmoset,mouse,orangutan,rabbit,rat, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000249519.1 ENST00000512794.1 chr4:111715559-111718500 2 554 2385 intergenic -9.56 0 0,0,0 0 0,0,0 190.137184115523 108.707756813417 528.123 147.810469314079 78.9387840670859 359.509 159.101083032491 72.7060796645702 351.217 0 0 cat,chimp,cow,dog,elephant,guinea_pig,horse,human,macaque,marmoset,mouse,opossum,orangutan,panda,pig,platypus,rabbit,rat, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000248656.1 ENST00000510034.1 chr4:112561651-112569964 4 606 7701 intergenic 0 1 0,1,0 0 0,0,0 28.2178217821782 6.62095831710167 90.136 103.541254125413 4.98675496688742 77.399 107.128712871287 6.38189845474614 83.198 0 0 cat,chimp,cow,dog,elephant,horse,human,macaque,marmoset,mouse,orangutan,panda,pig,rabbit,rat, lincRNA lincRNA A549@0,AG04450@0,BJ@0.007934,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000250855.1 ENST00000506068.1 chr4:112723957-112761042 3 478 36603 intergenic -4.11 0 0,0,0 0 0,0,0 0 10.0622080157364 0 0 8.25492445974374 0 6.10041841004184 11.3846406032292 0 1 1 chimp,human,macaque,marmoset,orangutan, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000248432.1 ENST00000508010.1 chr4:112725574-112730850 2 298 4976 intergenic 0.08 0 0,0,1 0 0,0,0 0 20.2429662379421 0 0 31.3414389067524 0 0 37.3370176848875 0 0 0 cat,chimp,cow,dog,elephant,horse,human,macaque,marmoset,orangutan,panda, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0.0067195,H1HESC@0,HELAS3@0,HEPG2@0.028408,HMEC@0,HSMM@0,HUVEC@0.158913,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0.0241175, 0 0 0 0 ENSG00000249815.1 ENST00000511219.1 chr4:112748037-112993854 3 580 245233 intergenic -9.20 0 0,0,0 0 0,0,0 0 19.067813059417 0 0 20.5635008339008 0 0 23.3411938849992 0 1 1 chimp,human,macaque,marmoset,orangutan, lincRNA lincRNA A549@0.0263975,AG04450@0,BJ@0,GM12878@0.0120615,H1HESC@0.036642,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0.0035265,NHEK@0,NHLF@0,SKNSHRA@0.0131255, 25 4 0 0 ENSG00000249509.1 ENST00000506057.1 chr4:113436541-113439392 2 683 2166 exonic -1.48 0 1,1,1 0 0,0,0 0 103.566943674977 205.974 45.4333821376281 149.01431209603 264.697 43.307467057101 154.708217913204 264.499 0 0 chimp,dog,elephant,human,marmoset,orangutan,panda,rabbit, antisense antisense A549@0.003169,AG04450@0,BJ@0,GM12878@0.14085,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0.003328,HUVEC@0,K562@0.013531,MCF7@0.0030015,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000249509.1 ENST00000504009.1 chr4:113436587-113468037 4 473 30971 exonic 0.36 0 1,1,1 0 0,0,0 0 60.3070614445772 205.974 79.522198731501 59.665493526202 276.384 188.649048625793 66.9801750024216 275.866 0 0 cat,chimp,cow,dog,elephant,guinea_pig,horse,human,macaque,marmoset,opossum,orangutan,panda,pig,rabbit, antisense antisense A549@0.003169,AG04450@0,BJ@0,GM12878@0.14085,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0.003328,HUVEC@0,K562@0.013531,MCF7@0.0030015,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000249532.1 ENST00000510655.1 chr4:113567632-113571207 3 637 2934 exonic -3.37 0 0,1,1 0 0,0,0 131.82103610675 147.973755964554 20.803 282.419152276295 174.879686434901 27.094 285.029827315542 191.464553510566 40.837 0 0 cat,chimp,cow,dog,elephant,guinea_pig,horse,human,macaque,marmoset,mouse,opossum,orangutan,panda,pig,platypus,rabbit, antisense antisense A549@0.016958,AG04450@0.010684,BJ@0.007628,GM12878@0.017287,H1HESC@177.81,HELAS3@0.0279985,HEPG2@0,HMEC@0,HSMM@0.005964,HUVEC@0.107698,K562@0.004259,MCF7@0,NHEK@0.00648533,NHLF@0,SKNSHRA@0.014186, 0 0 0 0 ENSG00000249532.1 ENST00000509938.1 chr4:113567879-113569855 3 342 1630 exonic -3.37 0 0,0,1 0 0,0,0 211.25730994152 126.985889570552 239.181 308.678362573099 157.384049079755 263.506 273.646198830409 182.275460122699 278.042 0 0 cat,chimp,cow,dog,elephant,guinea_pig,horse,human,macaque,marmoset,mouse,opossum,orangutan,panda,pig,rabbit,rat, antisense antisense A549@0.016958,AG04450@0.010684,BJ@0.007628,GM12878@0.017287,H1HESC@177.81,HELAS3@0.0279985,HEPG2@0,HMEC@0,HSMM@0.005964,HUVEC@0.107698,K562@0.004259,MCF7@0,NHEK@0.00648533,NHLF@0,SKNSHRA@0.014186, 0 0 0 0 ENSG00000249532.1 ENST00000505215.1 chr4:113567881-113569859 2 292 1684 exonic -3.37 0 0,0,1 0 0,0,0 252.486301369863 122.913895486936 237.213 353.972602739726 153.648456057007 263.506 309.880136986301 178.272565320665 278.042 0 0 cat,chimp,cow,dog,elephant,guinea_pig,horse,human,macaque,marmoset,mouse,opossum,orangutan,panda,pig,platypus,rabbit,rat, antisense antisense A549@0.016958,AG04450@0.010684,BJ@0.007628,GM12878@0.017287,H1HESC@177.81,HELAS3@0.0279985,HEPG2@0,HMEC@0,HSMM@0.005964,HUVEC@0.107698,K562@0.004259,MCF7@0,NHEK@0.00648533,NHLF@0,SKNSHRA@0.014186, 0 0 0 0 ENSG00000250046.2 ENST00000505632.1 chr4:113614203-113627966 2 738 13023 intergenic 3.09 0 0,0,0 0 0,0,0 0 15.5977117407663 47.867 0 17.1571834446748 30.786 134.609756097561 19.1688551025109 32.846 0 0 chimp,dog,horse,human,macaque,marmoset,orangutan, processed_transcript processed_transcript A549@0,AG04450@0,BJ@0,GM12878@0.0054485,H1HESC@4.32664,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0.01228, 0 0 0 0 ENSG00000250046.2 ENST00000536866.1 chr4:113614604-113614948 1 344 0 intergenic 0 0 0,1,0 0 0,0,0 0 0 0 0 0 0 361.386627906977 0 0 0 0 chimp,cow,horse,human,macaque,marmoset,mouse,orangutan,rabbit, processed_transcript processed_transcript A549@0,AG04450@0,BJ@0,GM12878@0.0054485,H1HESC@4.32664,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0.01228, 0 0 0 0 ENSG00000251126.1 ENST00000511590.1 chr4:113801616-113803486 2 710 1158 intronic 1.28 0 0,0,1 0 0,0,0 0 0 0 0 96.2651122625216 0 115.985915492958 193.070811744387 4.374 0 0 chimp,elephant,human,macaque,marmoset,orangutan,rat, processed_transcript processed_transcript A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0.030146,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000248152.1 ENST00000508959.1 chr4:113900746-113993118 3 1173 91195 intronic -0.67 0 0,0,1 0 0,0,0 0 12.4853226602336 0 0 9.94799056965843 0 0 13.3899665551839 0 1 1 chimp,human,macaque,marmoset,orangutan, antisense antisense A549@0,AG04450@0,BJ@0.0030425,GM12878@0.002258,H1HESC@0.001764,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0.032391, 0 0 0 0 ENSG00000249373.2 ENST00000513645.2 chr4:113952443-113955707 3 424 2836 intronic -2.43 1 0,0,0 0 0,0,0 80.3207547169811 32.5528913963329 3.68 65.2806603773585 17.361071932299 0 78.4316037735849 25.8307475317348 0 0 0 chimp,dog,elephant,horse,human,macaque,marmoset,mouse,orangutan,panda,pig,platypus,rabbit, antisense antisense A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000249304.1 ENST00000503557.1 chr4:114864412-114865476 2 439 623 intronic -1.76 0 0,1,0 0 0,0,0 0 0 0 0 0 0 0 0 0 0 0 cat,chimp,human,macaque,marmoset,orangutan,rabbit, antisense antisense A549@0,AG04450@0,BJ@0,GM12878@0.012043,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000248173.1 ENST00000508414.1 chr4:116843171-117218316 3 454 374687 intergenic -0.23 0 0,0,0 0 0,0,0 0 0.970610135926787 0 0 2.3321572405768 6.214 0 8.98018345979444 180.524 1 1 chimp,human,macaque,marmoset,orangutan, processed_transcript processed_transcript A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000248173.1 ENST00000509983.1 chr4:117017447-117218313 3 713 200149 intergenic -0.23 0 0,0,1 0 0,0,0 0 0.583655176893215 0 0 1.71644624754558 6.214 144.635343618513 6.79004641542051 179.561 0 0 cat,chimp,cow,dog,elephant,horse,human,macaque,marmoset,mouse,opossum,orangutan,pig,rabbit,rat, processed_transcript processed_transcript A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000250791.1 ENST00000491608.2 chr4:117410520-117436302 5 401 25373 intergenic -0.08 1 0,0,0 0 0,0,0 0 0 0 0 0.331927639616916 0 0 0.344066527411028 0 1 1 chimp,human,macaque,marmoset,orangutan, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0.006396,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000250791.1 ENST00000503597.1 chr4:117411232-117412356 2 136 986 intergenic 0 0 0,0,0 0 0,0,0 0 0 0 0 0 0 0 0 0 0 0 cat,chimp,cow,horse,human,macaque,marmoset,pig, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0.006396,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000224932.1 ENST00000416680.1 chr4:118235753-118281795 7 728 45302 intergenic 0.62 1 0,0,0 0 0,0,0 0 0 0 0 0.49105999735111 0 0 1.31552690830427 0 0 0 chimp,human,macaque,marmoset,orangutan, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000228358.1 ENST00000420701.1 chr4:118281781-118293754 4 593 11374 intergenic -2.24 1 0,0,0 0 0,0,0 0 0 0 0 4.24652716722349 0 0 8.34719535783366 0 0 0 chimp,dog,human,orangutan, lincRNA lincRNA A549@0,AG04450@0.016778,BJ@0,GM12878@0,H1HESC@0.013807,HELAS3@0,HEPG2@0,HMEC@0.068603,HSMM@0.0189235,HUVEC@0,K562@0,MCF7@0.0202985,NHEK@0.0235193,NHLF@0,SKNSHRA@0.011963, 0 0 0 0 ENSG00000228358.1 ENST00000426240.1 chr4:118281822-118294008 5 510 11668 intergenic -2.24 1 0,0,0 0 0,0,0 0 0 0 0 4.13952691121015 0 0 8.13687007199177 0 0 0 chimp,human,macaque,marmoset,orangutan, lincRNA lincRNA A549@0,AG04450@0.016778,BJ@0,GM12878@0,H1HESC@0.013807,HELAS3@0,HEPG2@0,HMEC@0.068603,HSMM@0.0189235,HUVEC@0,K562@0,MCF7@0.0202985,NHEK@0.0235193,NHLF@0,SKNSHRA@0.011963, 0 0 0 0 ENSG00000228358.1 ENST00000448804.1 chr4:118282505-118293891 3 598 10784 intergenic -2.24 1 0,0,0 0 0,0,0 0 0 0 0 4.47885756676558 0 0 8.80387611275964 0 0 0 chimp,dog,human,macaque,marmoset,orangutan, lincRNA lincRNA A549@0,AG04450@0.016778,BJ@0,GM12878@0,H1HESC@0.013807,HELAS3@0,HEPG2@0,HMEC@0.068603,HSMM@0.0189235,HUVEC@0,K562@0,MCF7@0.0202985,NHEK@0.0235193,NHLF@0,SKNSHRA@0.011963, 0 0 0 0 ENSG00000228358.1 ENST00000419264.1 chr4:118282556-118293891 4 422 10907 intergenic -2.24 1 0,0,0 0 0,0,0 0 0 0 0 4.42834876684698 0 0 8.70459338039791 0 0 0 chimp,human,macaque,marmoset,orangutan, lincRNA lincRNA A549@0,AG04450@0.016778,BJ@0,GM12878@0,H1HESC@0.013807,HELAS3@0,HEPG2@0,HMEC@0.068603,HSMM@0.0189235,HUVEC@0,K562@0,MCF7@0.0202985,NHEK@0.0235193,NHLF@0,SKNSHRA@0.011963, 0 0 0 0 ENSG00000236922.2 ENST00000422145.2 chr4:118349552-118612180 4 2349 260273 intergenic -0.32 1 0,0,0 0 0,0,0 0 3.0615368656424 0 1.48439504061565 3.41986606885582 0 1.5502351432236 6.68518112977029 0 0 0 cat,chimp,cow,dog,elephant,guinea_pig,horse,human,macaque,marmoset,orangutan,panda,rabbit, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0.008268,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0.0078835,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000236922.2 ENST00000437514.1 chr4:118349559-118461728 5 778 111383 intergenic -1.07 0 0,0,0 0 0,0,0 0 3.57531221101963 0 0 3.03441279189823 0 0 3.68854313494878 0 0 0 chimp,dog,elephant,horse,human,macaque,marmoset,mouse,orangutan,panda,pig, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0.008268,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0.0078835,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000229565.1 ENST00000442020.1 chr4:118755556-118791103 2 574 34971 intergenic 2.06 0 0,0,0 0 0,0,0 0 1.31537559692316 0 0 0.601755740470676 0 0 1.47533670755769 0 0 0 cat,chimp,cow,dog,elephant,horse,human,macaque,marmoset,orangutan,panda,pig, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000246493.1 ENST00000500560.1 chr4:119199914-119200974 3 615 441 intergenic -2.47 0 1,1,1 1 0,0,0 0 135.455782312925 0 1.27317073170732 163.281179138322 10.846 1.28455284552846 142.258503401361 11.393 0 0 chimp,cow,dog,elephant,horse,human,macaque,marmoset,orangutan,panda,pig, lincRNA lincRNA A549@25.9595,AG04450@17.9528,BJ@36.1032,GM12878@34.8201,H1HESC@28.4131,HELAS3@31.3099,HEPG2@25.4062,HMEC@25.2584,HSMM@9.39798,HUVEC@16.1058,K562@38.2957,MCF7@19.053,NHEK@34.2136,NHLF@17.0593,SKNSHRA@22.152, 0 0 0 0 ENSG00000245622.1 ENST00000501426.1 chr4:119585252-119605621 6 1496 18863 intergenic 4.80 0 0,0,0 0 0,0,0 0 0.632190001590415 0 0 1.72713778296135 7.911 0 2.81206594921274 7.873 0 0 cat,chimp,dog,human,macaque,marmoset,orangutan,panda, lincRNA lincRNA A549@0.0120855,AG04450@0.0123165,BJ@0.007559,GM12878@0.13846,H1HESC@0.0110455,HELAS3@0.063292,HEPG2@0.03074,HMEC@0,HSMM@0.050722,HUVEC@0,K562@0.075292,MCF7@0,NHEK@0.00861333,NHLF@0.0064805,SKNSHRA@0.0347845, 0 0 0 0 ENSG00000249356.1 ENST00000514608.1 chr4:119990479-119991452 1 973 0 intergenic 2.11 0 0,0,0 0 0,0,0 0 0 0 0 0 14.218 0 0 14.836 0 0 cat,chimp,cow,elephant,horse,human,macaque,marmoset,orangutan, lincRNA lincRNA A549@0.619606,AG04450@0.443665,BJ@0.153817,GM12878@0,H1HESC@0.169902,HELAS3@0.370221,HEPG2@0.190413,HMEC@0.033631,HSMM@0.044985,HUVEC@0.110795,K562@0.686989,MCF7@0.117464,NHEK@0.190199,NHLF@0.0319635,SKNSHRA@0.279699, 0 0 0 0 ENSG00000250950.1 ENST00000506942.1 chr4:120377505-120378432 2 571 354 intergenic -11.32 0 0,0,0 0 0,0,0 0 0 0 0 0 0 0 0 0 1 1 chimp,human,macaque,marmoset,orangutan, processed_transcript processed_transcript A549@0.33885,AG04450@0.48387,BJ@0.605408,GM12878@1.77703,H1HESC@0.711536,HELAS3@0.657303,HEPG2@1.149,HMEC@0.001499,HSMM@0.0122995,HUVEC@0.196368,K562@2.03791,MCF7@0.212674,NHEK@0.152229,NHLF@0.027231,SKNSHRA@0.557196, 0 0 0 0 ENSG00000250772.1 ENST00000503266.1 chr4:120720244-120725670 5 545 4873 intergenic -0.37 0 0,0,1 0 0,0,0 0 0 0 14.8623853211009 15.1093782064437 0 15.3082568807339 18.838292632875 0 1 1 chimp,human,macaque,marmoset,orangutan, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000250772.1 ENST00000512219.1 chr4:120720251-120725655 5 632 4764 intergenic -0.37 0 0,0,1 0 0,0,0 0 0 0 12.8164556962025 15.4550797649034 0 13.2009493670886 19.2693115029387 0 0 0 chimp,dog,human,macaque,marmoset,orangutan,pig, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000250392.1 ENST00000505122.1 chr4:120860695-120885376 2 568 24111 intergenic -1.13 0 0,0,1 0 0,0,0 0 0 0 0 0 0 0 0.151175811870101 0 0 0 chimp,cow,dog,elephant,human,macaque,marmoset,orangutan, processed_transcript processed_transcript A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0.025687,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0.008618,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0.0079745, 0 0 0 0 ENSG00000253825.1 ENST00000518701.1 chr4:120956188-120961770 2 472 5108 intergenic -6.17 0 0,0,0 0 0,0,0 0 0 0 0 0 0 0 0 0 0 0 chimp,elephant,horse,human,macaque,marmoset,orangutan,panda, lincRNA lincRNA A549@0.0045795,AG04450@0,BJ@0,GM12878@0.004253,H1HESC@0,HELAS3@0.0345155,HEPG2@0,HMEC@0,HSMM@0.013023,HUVEC@0.0056335,K562@0.009797,MCF7@0,NHEK@0.002693,NHLF@0,SKNSHRA@0.011733, 0 0 0 0 ENSG00000250938.1 ENST00000503073.1 chr4:120988113-121006734 2 2337 16282 exonic -5.27 0 0,1,0 1 0,0,0 0 13.202984891291 21.9 4.5609756097561 15.2550055275765 53.967 7.22379118528027 17.4903574499447 58.309 0 0 chimp,cow,dog,elephant,guinea_pig,horse,human,macaque,marmoset,mouse,opossum,orangutan,panda,pig,rabbit, processed_transcript processed_transcript A549@0.012265,AG04450@0.0281095,BJ@0.033741,GM12878@0.0319405,H1HESC@0.026332,HELAS3@0,HEPG2@0.01873,HMEC@0.007146,HSMM@0.019504,HUVEC@0.0404885,K562@0.008613,MCF7@0.0017545,NHEK@0.0290443,NHLF@0.0081555,SKNSHRA@0.0981255, 0 0 0 0 ENSG00000250938.1 ENST00000511064.1 chr4:120988113-121087047 4 569 98359 exonic -19.06 0 0,1,0 1 0,0,0 0 8.64426234508281 21.9 3.80140597539543 10.4816132738234 53.967 3.98769771528998 12.1844366046828 58.309 1 1 chimp,human,macaque,marmoset,orangutan, processed_transcript processed_transcript A549@0.012265,AG04450@0.0281095,BJ@0.033741,GM12878@0.0319405,H1HESC@0.026332,HELAS3@0,HEPG2@0.01873,HMEC@0.007146,HSMM@0.019504,HUVEC@0.0404885,K562@0.008613,MCF7@0.0017545,NHEK@0.0290443,NHLF@0.0081555,SKNSHRA@0.0981255, 0 0 0 0 ENSG00000250938.1 ENST00000504106.1 chr4:120988125-121314877 6 523 326219 exonic 0.05 0 0,1,0 1 0,0,0 0 12.4318050144228 21.9 3.51816443594646 12.6860728528994 54.613 4.7074569789675 15.8895895088882 58.959 0 0 chimp,horse,human,macaque,marmoset,orangutan, processed_transcript processed_transcript A549@0.012265,AG04450@0.0281095,BJ@0.033741,GM12878@0.0319405,H1HESC@0.026332,HELAS3@0,HEPG2@0.01873,HMEC@0.007146,HSMM@0.019504,HUVEC@0.0404885,K562@0.008613,MCF7@0.0017545,NHEK@0.0290443,NHLF@0.0081555,SKNSHRA@0.0981255, 0 0 0 0 ENSG00000250938.1 ENST00000508362.1 chr4:120988666-121337921 6 552 348693 intergenic -2.21 0 0,1,0 0 0,0,0 0 11.7401467766775 21.9 0 12.1078513190687 54.613 0.938405797101449 15.1412159119913 58.959 0 0 chimp,horse,human,macaque,marmoset,orangutan,pig, processed_transcript processed_transcript A549@0.012265,AG04450@0.0281095,BJ@0.033741,GM12878@0.0319405,H1HESC@0.026332,HELAS3@0,HEPG2@0.01873,HMEC@0.007146,HSMM@0.019504,HUVEC@0.0404885,K562@0.008613,MCF7@0.0017545,NHEK@0.0290443,NHLF@0.0081555,SKNSHRA@0.0981255, 0 0 0 0 ENSG00000249409.1 ENST00000506100.1 chr4:121560245-121571943 2 542 11154 intergenic 2.41 0 0,0,0 0 0,0,0 0 0 0 0 0.778196162811547 0 0 1.02160659852968 0 0 0 chimp,horse,human,macaque,orangutan, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000249409.1 ENST00000505556.1 chr4:121560264-121571951 2 528 11157 intergenic 2.41 0 0,0,0 0 0,0,0 0 0 0 0 0.777986914044994 0 0 1.02133189925607 0 0 0 chimp,elephant,human,macaque,orangutan, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000250344.1 ENST00000507782.1 chr4:121992584-122001631 3 618 8425 intronic -1.25 0 0,1,0 0 0,0,0 0 40.8804747774481 84.416 0 19.3783976261128 60.097 0 23.6502077151335 53.788 0 0 chimp,dog,guinea_pig,horse,human,macaque,marmoset,orangutan,panda,rabbit, lincRNA lincRNA A549@0,AG04450@0.0095345,BJ@0,GM12878@0.008552,H1HESC@0,HELAS3@0.0085475,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0.0258005,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0.0089555, 0 0 0 0 ENSG00000227145.1 ENST00000417927.1 chr4:123540138-123610311 11 3737 66416 exonic 4.81 1 0,0,1 0 0,0,0 56.2646507894033 18.3776499638641 0 46.0551244313621 16.8125602264515 2.295 32.2306663098742 16.3616297277764 2.331 0 0 chimp,elephant,human,macaque,orangutan, antisense antisense A549@0.005399,AG04450@0.0048445,BJ@0.068403,GM12878@0.0137545,H1HESC@0.002214,HELAS3@0.078474,HEPG2@0.00655,HMEC@0,HSMM@0,HUVEC@0.0292455,K562@0.017871,MCF7@0.0153145,NHEK@0.002447,NHLF@0.0072595,SKNSHRA@0.056476, 0 0 0 0 ENSG00000249125.1 ENST00000503950.1 chr4:124411423-124443261 3 536 31298 intergenic 11.07 0 0,0,0 0 0,0,0 0 6.50111828231836 0 8.5634328358209 12.9244360662023 0 16.9776119402985 14.5760431976484 0 0 0 chimp,guinea_pig,human,macaque,marmoset,orangutan, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0.0053995,HELAS3@0.0154885,HEPG2@0.0054355,HMEC@0,HSMM@0,HUVEC@0,K562@0.017729,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 1 96 0 0 ENSG00000251526.1 ENST00000508291.1 chr4:124426434-124448680 3 581 21661 intergenic -3.07 0 0,1,0 0 0,0,0 25.6557659208262 11.5556530169429 5.911 0 20.3827616453534 3.315 0 21.9494944831725 3.445 0 0 cat,chimp,dog,elephant,human,macaque,marmoset,orangutan,panda, lincRNA lincRNA A549@0.018064,AG04450@0.0040325,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000249464.1 ENST00000514823.1 chr4:124571422-124587987 3 5259 11302 intergenic 3.37 0 0,1,0 0 0,0,0 0 20.9192178375509 172.872 1.20212968244913 27.8367545567156 240.668 1.22532800912721 27.8349849584144 204.38 1 1 chimp,human,macaque,marmoset,orangutan, lincRNA processed_transcript A549@0.149166,AG04450@0.0293025,BJ@0.0138855,GM12878@0.440882,H1HESC@0.043814,HELAS3@0.341115,HEPG2@0.874289,HMEC@0.011971,HSMM@0.0195605,HUVEC@0.156043,K562@0.0049225,MCF7@0.028227,NHEK@0.014467,NHLF@0.059189,SKNSHRA@0.083099, 0 0 0 0 ENSG00000249464.1 ENST00000511919.1 chr4:124571446-124851509 6 584 279469 intergenic -7.68 0 1,1,1 0 0,0,0 0 10.0851436116349 172.872 10.638698630137 18.4186761322365 240.668 10.7037671232877 22.2860460373064 204.38 0 0 chimp,cow,dog,elephant,guinea_pig,horse,human,macaque,marmoset,orangutan,pig,rabbit, lincRNA processed_transcript A549@0.149166,AG04450@0.0293025,BJ@0.0138855,GM12878@0.440882,H1HESC@0.043814,HELAS3@0.341115,HEPG2@0.874289,HMEC@0.011971,HSMM@0.0195605,HUVEC@0.156043,K562@0.0049225,MCF7@0.028227,NHEK@0.014467,NHLF@0.059189,SKNSHRA@0.083099, 0 0 0 0 ENSG00000249464.1 ENST00000508111.1 chr4:124571446-124851561 6 639 279466 intergenic 2.66 0 1,1,1 0 0,0,0 0 10.0852518732153 172.872 9.72300469483568 18.4188738522754 240.668 9.78247261345853 22.2862852726271 204.38 0 0 chimp,cow,dog,elephant,guinea_pig,horse,human,macaque,marmoset,orangutan,pig,rabbit, lincRNA processed_transcript A549@0.149166,AG04450@0.0293025,BJ@0.0138855,GM12878@0.440882,H1HESC@0.043814,HELAS3@0.341115,HEPG2@0.874289,HMEC@0.011971,HSMM@0.0195605,HUVEC@0.156043,K562@0.0049225,MCF7@0.028227,NHEK@0.014467,NHLF@0.059189,SKNSHRA@0.083099, 0 0 0 0 ENSG00000226655.1 ENST00000439565.1 chr4:124666078-124666828 3 474 272 intergenic 2.14 0 0,0,0 0 0,0,0 26.4556962025316 0 0 0 0 49.715 0 0 301.24 0 0 cat,chimp,cow,horse,human,macaque,marmoset,orangutan, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000249464.1 ENST00000515769.1 chr4:124695419-124786728 3 2201 89104 intergenic 0.83 0 0,0,0 0 0,0,0 0 11.5933852576764 0 0 21.9865550368109 0 0 26.2541973424313 0 0 0 cat,chimp,dog,elephant,horse,human,macaque,orangutan,panda,pig, lincRNA processed_transcript A549@0.149166,AG04450@0.0293025,BJ@0.0138855,GM12878@0.440882,H1HESC@0.043814,HELAS3@0.341115,HEPG2@0.874289,HMEC@0.011971,HSMM@0.0195605,HUVEC@0.156043,K562@0.0049225,MCF7@0.028227,NHEK@0.014467,NHLF@0.059189,SKNSHRA@0.083099, 0 0 0 0 ENSG00000249837.1 ENST00000507299.1 chr4:125070532-125173199 5 425 102234 intergenic -2.24 0 0,0,0 0 0,0,0 0 3.22797699395504 0 0 11.7112702232134 5.202 0 13.7040906156465 5.605 0 0 chimp,horse,human,macaque,marmoset,orangutan, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000250149.1 ENST00000507203.1 chr4:126597873-126673948 2 391 75682 intergenic -5.62 0 0,1,0 0 0,0,0 0 12.7269628181073 0 0 17.3153325757776 0 0 26.8212256547131 0 0 0 guinea_pig,human,macaque,marmoset, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0.0226855,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000251649.1 ENST00000505741.1 chr4:126991863-126993159 2 298 996 intergenic -9.77 0 0,0,0 0 0,0,0 222.530201342282 57.3383534136546 0 304.758389261745 110.475903614458 0 347.261744966443 113.683734939759 0 0 0 chimp,cow,dog,elephant,guinea_pig,human,macaque,marmoset,opossum,orangutan,pig,rabbit, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000249178.1 ENST00000515428.1 chr4:127483774-127876561 3 723 392060 intergenic -7.48 0 0,1,0 1 0,0,0 0 7.95044891088099 0 26.4522821576764 10.419101668112 0 87.2918395573997 11.7408840483599 0 0 0 cat,chimp,guinea_pig,human,macaque,marmoset,mouse,orangutan,rat, lincRNA lincRNA A549@0,AG04450@0.0044415,BJ@0.0133905,GM12878@0.0055535,H1HESC@0.0028575,HELAS3@0.0036555,HEPG2@0,HMEC@0,HSMM@0.0176165,HUVEC@0,K562@5.25509,MCF7@0,NHEK@0.039485,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000250945.1 ENST00000506852.1 chr4:127964585-127998917 3 645 33683 intergenic 2.68 1 0,1,0 0 0,0,0 7.68992248062016 13.7317934863284 0 0 12.0914704747202 0 0 13.5359083217053 0 0 0 chimp,human,macaque,marmoset,orangutan,panda, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0.0124525, 0 0 0 0 ENSG00000248491.1 ENST00000513519.1 chr4:128018046-128027926 2 504 9374 intergenic 2.67 0 0,0,0 0 0,0,0 0 40.5715809686367 0 17.952380952381 54.5992105824621 0 18.9047619047619 48.0937700021336 0 0 0 cat,chimp,cow,dog,elephant,horse,human,macaque,marmoset,orangutan,panda,pig,rabbit,rat, lincRNA lincRNA A549@0,AG04450@0.0044295,BJ@0,GM12878@0,H1HESC@0,HELAS3@0.004619,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0.0137665,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000248491.1 ENST00000504050.1 chr4:128018253-128391707 6 639 372805 intergenic 0.09 0 0,0,1 0 0,0,0 0 12.7331607676936 0 14.1596244131455 19.0978232588082 0 14.9107981220657 20.4285511192178 0 0 0 cat,chimp,elephant,horse,human,macaque,marmoset,orangutan,pig,rabbit, lincRNA lincRNA A549@0,AG04450@0.0044295,BJ@0,GM12878@0,H1HESC@0,HELAS3@0.004619,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0.0137665,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000248491.1 ENST00000509671.1 chr4:128322881-128391724 3 238 68601 intergenic -1.39 0 0,0,1 0 0,0,0 0 12.4960423317444 0 0 22.9692424308683 0 0 23.4686229063716 0 1 1 chimp,human,macaque,marmoset,orangutan, lincRNA lincRNA A549@0,AG04450@0.0044295,BJ@0,GM12878@0,H1HESC@0,HELAS3@0.004619,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0.0137665,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000251432.2 ENST00000505133.1 chr4:129213906-129387816 5 632 173270 intergenic 0.46 0 0,0,0 0 0,0,0 0 14.5987591620015 20.02 0 21.7281064235009 21.394 1.19145569620253 25.5800427079125 27.864 0 0 cat,chimp,cow,dog,elephant,guinea_pig,horse,human,macaque,marmoset,orangutan,panda,pig,rabbit, lincRNA processed_transcript A549@4.01738,AG04450@0.754761,BJ@0.583637,GM12878@0.485016,H1HESC@0.559947,HELAS3@0.3885,HEPG2@0.211906,HMEC@0.280389,HSMM@0.253161,HUVEC@0.319684,K562@0.546474,MCF7@0.364456,NHEK@1.70385,NHLF@0.0938035,SKNSHRA@0.64561, 0 0 0 0 ENSG00000251432.2 ENST00000509834.2 chr4:129214088-129396151 5 738 181317 intergenic 1.82 0 0,0,0 0 0,0,0 0 16.3277519482453 20.02 0 23.6011350287066 21.394 0 27.5522537875654 27.864 0 0 cat,chimp,cow,dog,elephant,horse,human,macaque,marmoset,orangutan,panda,pig,rabbit, lincRNA processed_transcript A549@4.01738,AG04450@0.754761,BJ@0.583637,GM12878@0.485016,H1HESC@0.559947,HELAS3@0.3885,HEPG2@0.211906,HMEC@0.280389,HSMM@0.253161,HUVEC@0.319684,K562@0.546474,MCF7@0.364456,NHEK@1.70385,NHLF@0.0938035,SKNSHRA@0.64561, 0 0 0 0 ENSG00000251432.2 ENST00000511497.1 chr4:129349225-129440549 9 2003 89305 intergenic 4.83 0 1,1,1 0 0,0,0 16.9745381927109 20.4033480768154 0 7.47378931602596 27.5368568389228 0 9.83325012481278 29.2340518448015 2.43 0 0 cat,chimp,dog,horse,human,macaque,marmoset,orangutan, lincRNA processed_transcript A549@4.01738,AG04450@0.754761,BJ@0.583637,GM12878@0.485016,H1HESC@0.559947,HELAS3@0.3885,HEPG2@0.211906,HMEC@0.280389,HSMM@0.253161,HUVEC@0.319684,K562@0.546474,MCF7@0.364456,NHEK@1.70385,NHLF@0.0938035,SKNSHRA@0.64561, 0 0 0 0 ENSG00000251432.2 ENST00000504984.1 chr4:129376324-129391802 4 738 14734 intergenic 4.83 0 0,0,0 0 0,0,0 0 44.4588027691055 182.954 17.60027100271 47.9353875390254 187.501 23.9945799457995 49.4163160038007 158.634 0 0 chimp,cow,dog,guinea_pig,horse,human,macaque,marmoset,orangutan,pig,rabbit, lincRNA processed_transcript A549@4.01738,AG04450@0.754761,BJ@0.583637,GM12878@0.485016,H1HESC@0.559947,HELAS3@0.3885,HEPG2@0.211906,HMEC@0.280389,HSMM@0.253161,HUVEC@0.319684,K562@0.546474,MCF7@0.364456,NHEK@1.70385,NHLF@0.0938035,SKNSHRA@0.64561, 0 0 0 0 ENSG00000251432.2 ENST00000513851.1 chr4:129391661-129392235 2 290 282 intergenic 0.86 1 0,0,1 0 0,0,0 0 0 0 32.0689655172414 0 1.736 43.7241379310345 0 1.813 0 0 chimp,cow,guinea_pig,horse,human,macaque,marmoset,orangutan,pig,rabbit, lincRNA processed_transcript A549@4.01738,AG04450@0.754761,BJ@0.583637,GM12878@0.485016,H1HESC@0.559947,HELAS3@0.3885,HEPG2@0.211906,HMEC@0.280389,HSMM@0.253161,HUVEC@0.319684,K562@0.546474,MCF7@0.364456,NHEK@1.70385,NHLF@0.0938035,SKNSHRA@0.64561, 0 0 0 0 ENSG00000246458.1 ENST00000501498.1 chr4:129431493-129436412 2 2880 2037 intergenic -0.38 0 0,0,0 0 0,0,0 0 0 0 3.03680555555556 6.83357879234168 0 3.12013888888889 7.29995090819833 0 1 1 chimp,human,macaque,marmoset,orangutan, lincRNA lincRNA A549@2.50063,AG04450@0.156768,BJ@0.105313,GM12878@0.146888,H1HESC@0.123294,HELAS3@0.119376,HEPG2@0.0227915,HMEC@0.021163,HSMM@0.024502,HUVEC@0.21847,K562@0.153948,MCF7@0.140031,NHEK@1.18855,NHLF@0.0057405,SKNSHRA@0.140841, 0 0 0 0 ENSG00000248187.1 ENST00000514265.1 chr4:129489127-129491686 2 1621 936 intergenic 0.80 0 0,1,0 0 0,0,0 0 0 24.645 8.38988278840222 21.6442307692308 5.259 12.3288093769278 29.0608974358974 7.287 0 0 cat,chimp,cow,dog,horse,human,macaque,marmoset,orangutan,panda,pig,rabbit, lincRNA lincRNA A549@0.374449,AG04450@0.0269395,BJ@0.0952775,GM12878@0,H1HESC@0.043601,HELAS3@0,HEPG2@0.0033615,HMEC@0.005046,HSMM@0.24106,HUVEC@0.303498,K562@0.0121065,MCF7@0,NHEK@0,NHLF@0.408728,SKNSHRA@0.0286035, 0 0 0 0 ENSG00000248802.1 ENST00000487657.2 chr4:129504154-129522555 2 480 17919 intergenic -18.38 0 0,1,0 0 0,0,0 0 39.0070874490764 0 15.6333333333333 41.4621909704783 59.5 26.3 43.6653831128969 68.014 0 0 chimp,cow,dog,guinea_pig,human,macaque,marmoset,orangutan,pig,rabbit, lincRNA lincRNA A549@0.0057305,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0.004514,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0.0094145, 2 44 0 0 ENSG00000248802.1 ENST00000509360.1 chr4:129520594-129522562 2 201 1765 intergenic 0 0 0,1,1 0 0,0,0 0 12.7705382436261 0 37.3333333333333 35.442492917847 59.5 62.8059701492537 48.7784702549575 68.014 0 0 cat,dog,human,macaque,orangutan,panda, lincRNA lincRNA A549@0.0057305,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0.004514,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0.0094145, 0 0 0 0 ENSG00000250193.1 ENST00000503542.1 chr4:130220330-130226177 2 573 5272 intergenic -4.49 0 0,0,0 0 0,0,0 0 0 0 61.3420593368237 2.63524279210926 0 62.9075043630017 2.75929438543247 0 0 0 cat,chimp,cow,dog,human,macaque,marmoset,orangutan,panda, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000246876.2 ENST00000500092.2 chr4:130645326-130692633 5 1958 45341 intergenic -0.04 1 0,0,0 0 0,0,0 35.7334014300306 25.8838799320703 0 66.8554647599591 26.9237775964359 0 74.1848825331971 27.619329084052 0 0 1 human,orangutan, lincRNA lincRNA A549@0.016961,AG04450@0,BJ@0,GM12878@0,H1HESC@0.0190675,HELAS3@0.150493,HEPG2@0.116143,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0.004166,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000246876.2 ENST00000509105.1 chr4:130669272-130692636 6 647 22707 intergenic -0.26 0 0,0,0 0 0,0,0 0 18.3605936495354 0 0 23.3923019333245 0 0 24.8178535253446 0 0 0 cat,chimp,human,macaque,orangutan, lincRNA lincRNA A549@0.016961,AG04450@0,BJ@0,GM12878@0,H1HESC@0.0190675,HELAS3@0.150493,HEPG2@0.116143,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0.004166,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000249618.1 ENST00000513875.1 chr4:130692814-130876523 17 1760 181917 intergenic -0.01 1 0,0,0 0 0,0,0 0 16.8236613400617 0 0 19.1530313274735 2.99 0 26.1985960630397 4.769 1 1 chimp,human,macaque,marmoset,orangutan, processed_transcript processed_transcript A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000249618.1 ENST00000508724.1 chr4:130692819-130712815 4 499 19491 intergenic -7.26 1 0,0,1 0 0,0,0 239.278557114228 19.5163408752758 0 250.404809619238 25.2807962649428 2.99 262.284569138277 27.5074136781078 4.769 0 0 cat,chimp,cow,dog,elephant,guinea_pig,horse,human,macaque,marmoset,mouse,opossum,orangutan,panda,pig,rabbit, processed_transcript processed_transcript A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000249618.1 ENST00000514892.1 chr4:130710114-130719804 3 478 9208 intergenic -6.28 0 0,0,1 0 0,0,0 214.393305439331 2.15030408340573 125.744 205.012552301255 3.125325803649 113.903 214.02510460251 0.96731103388358 161.453 0 0 cat,chimp,cow,dog,guinea_pig,horse,human,macaque,marmoset,mouse,orangutan,panda,pig,rabbit, processed_transcript processed_transcript A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000249618.1 ENST00000507099.1 chr4:130758516-130849871 4 528 90821 intergenic -0.01 0 0,0,0 0 0,0,0 0 13.1430726373856 0 0 17.5164334239878 0 0 30.8938131048986 0 0 0 cat,chimp,human,macaque,marmoset,orangutan, processed_transcript processed_transcript A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000251326.1 ENST00000508942.1 chr4:131297384-131307526 2 628 9512 intergenic -5.67 0 0,0,0 0 0,0,0 0 0 0 0 0 0 0 0 0 0 0 NA lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000250503.1 ENST00000509166.1 chr4:131802182-131806796 2 432 4180 intergenic 0 0 0,0,0 0 0,0,0 0 0 0 0 0 0 0 0 0 0 1 chimp,human,orangutan, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000250102.1 ENST00000500169.2 chr4:132301168-132449276 3 447 147657 intergenic 4.38 0 1,1,1 0 0,0,0 0 4.62226646891106 0 0 3.72208564443271 0 0 7.42843210955119 0 0 0 human, processed_transcript processed_transcript A549@0.10185,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0.0047345,HMEC@0,HSMM@0,HUVEC@0,K562@0.584817,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000250102.1 ENST00000505436.1 chr4:132407112-132462552 4 519 54915 intergenic -5.77 0 0,0,0 0 0,0,0 0 9.86865155239916 0 0 6.39328052444687 0 0 10.1507420559046 0 0 0 chimp,dog,elephant,human,macaque,marmoset,orangutan,panda, processed_transcript processed_transcript A549@0.10185,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0.0047345,HMEC@0,HSMM@0,HUVEC@0,K562@0.584817,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000251676.1 ENST00000507933.1 chr4:132694457-132695847 2 489 899 intergenic 1.83 0 0,0,0 0 0,0,0 0 0 0 0 0 0 0 0 0 0 0 cat,chimp,cow,dog,elephant,horse,human,macaque,marmoset,orangutan,panda,pig,rabbit, lincRNA lincRNA A549@0,AG04450@0,BJ@0.005014,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0.186895,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000251676.1 ENST00000514222.1 chr4:132694702-132696191 3 677 808 intergenic 1.40 0 0,0,0 0 0,0,0 0 0 0 0 0 0 0 0 0 0 0 cat,chimp,elephant,horse,human,macaque,marmoset,orangutan, lincRNA lincRNA A549@0,AG04450@0,BJ@0.005014,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0.186895,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000251676.1 ENST00000507332.1 chr4:132694720-132712637 2 399 17516 intergenic 0 0 0,0,0 0 0,0,0 0 2.30189540991094 0 0 5.81514044302352 0 0 6.86075588033798 0 0 0 cat,chimp,cow,dog,elephant,horse,human,macaque,marmoset,mouse,orangutan,panda,pig,rabbit,rat, lincRNA lincRNA A549@0,AG04450@0,BJ@0.005014,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0.186895,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000251555.1 ENST00000510592.1 chr4:132851186-132897107 3 451 45466 intergenic -2.53 0 0,1,0 0 0,0,0 0 7.70254695816654 0 0 9.28199093828355 0 0 9.28452030088418 0 0 0 chimp,cow,dog,horse,human,macaque,marmoset,panda,rabbit, lincRNA lincRNA A549@0.0556765,AG04450@0.033371,BJ@0,GM12878@0.0607785,H1HESC@0.052367,HELAS3@0.0392735,HEPG2@0.0370945,HMEC@0,HSMM@0.004532,HUVEC@0.0827335,K562@0.199984,MCF7@0.030914,NHEK@0.0907533,NHLF@0.01275,SKNSHRA@0.022771, 176 2 114 2 ENSG00000251598.1 ENST00000420721.2 chr4:132925965-133045186 3 579 118638 intergenic 2.94 0 0,1,0 0 0,0,0 0 2.37016807431009 0 0 3.84157689778991 0 0 4.95330332608439 0 0 0 NA lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0.0034635,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000249463.1 ENST00000510967.1 chr4:132948330-132949589 2 345 912 intergenic -1.62 0 0,0,1 0 0,0,0 0 0 0 0 0 0 0 0 0 0 0 chimp,horse,human,macaque,marmoset,orangutan, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0.020265,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000251398.1 ENST00000513270.1 chr4:133512244-133599658 4 504 86904 intergenic -3.31 0 0,0,1 0 0,0,0 45.7440476190476 1.859534658934 0 24.3452380952381 2.66178771978275 0 28.4107142857143 6.44293703396852 0 0 1 chimp,human,orangutan, processed_transcript processed_transcript A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000251488.1 ENST00000509628.1 chr4:133757927-133902832 3 584 144317 intergenic -2.95 0 0,0,0 0 0,0,0 44.8869863013699 5.51656423013228 0 116.573630136986 7.7942307559054 0 115.678082191781 8.62705710345975 0 0 0 cat,chimp,cow,dog,elephant,horse,human,macaque,marmoset,mouse,orangutan,panda,pig,rabbit,rat, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0.004958,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0.022411,K562@0,MCF7@0.003425,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000249513.2 ENST00000511916.2 chr4:133906665-133909832 3 459 2704 intergenic -6.30 0 0,0,0 0 0,0,0 82.6732026143791 22.6697485207101 0 125.470588235294 13.424926035503 0 126.065359477124 13.7536982248521 0 0 0 cat,chimp,cow,dog,elephant,guinea_pig,horse,human,macaque,marmoset,mouse,orangutan,panda,pig,rabbit,rat, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0.005059,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0.081582,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0.006019, 0 0 0 0 ENSG00000250241.1 ENST00000506897.1 chr4:133996466-134017981 5 493 21014 intergenic 3.36 0 0,0,0 0 0,0,0 0 4.38426763110307 0 0 5.47325592462168 0 0 7.7202817169506 0 1 1 chimp,human,macaque,marmoset,orangutan, lincRNA processed_transcript A549@0.0043895,AG04450@0.0019385,BJ@0.165818,GM12878@0.001037,H1HESC@0.20496,HELAS3@0.0260585,HEPG2@0.0194145,HMEC@0,HSMM@0.00769,HUVEC@0.563675,K562@0.0044505,MCF7@0.158065,NHEK@0,NHLF@0.030443,SKNSHRA@0.0203835, 0 0 0 0 ENSG00000250241.1 ENST00000505289.1 chr4:134015015-134070268 9 2811 52426 intergenic 5.36 1 0,1,0 1 0,0,0 27.5866239772323 20.3889291572884 560.424 25.5261472785486 19.3567313928204 434.634 29.2372821060121 29.8837027429138 415.141 0 0 chimp,cow,dog,human,macaque,marmoset,orangutan,panda, lincRNA processed_transcript A549@0.0043895,AG04450@0.0019385,BJ@0.165818,GM12878@0.001037,H1HESC@0.20496,HELAS3@0.0260585,HEPG2@0.0194145,HMEC@0,HSMM@0.00769,HUVEC@0.563675,K562@0.0044505,MCF7@0.158065,NHEK@0,NHLF@0.030443,SKNSHRA@0.0203835, 0 0 0 0 ENSG00000250241.1 ENST00000509715.1 chr4:134061736-134070271 5 559 7968 intergenic 5.36 0 0,1,0 1 0,0,0 141.148479427549 56.7231425702811 561.288 131.420393559928 66.3269327309237 435.183 132.677996422182 76.9871987951807 415.813 0 0 cat,chimp,cow,dog,elephant,guinea_pig,horse,human,macaque,marmoset,mouse,orangutan,panda,rabbit, lincRNA retained_intron A549@0.0043895,AG04450@0.0019385,BJ@0.165818,GM12878@0.001037,H1HESC@0.20496,HELAS3@0.0260585,HEPG2@0.0194145,HMEC@0,HSMM@0.00769,HUVEC@0.563675,K562@0.0044505,MCF7@0.158065,NHEK@0,NHLF@0.030443,SKNSHRA@0.0203835, 0 0 0 0 ENSG00000248119.2 ENST00000507172.2 chr4:134178445-134184190 4 1262 4477 intergenic 1.61 0 0,0,0 0 0,0,0 0 0 0 0 0 0 0 0 0 0 0 NA lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0.0278515,HELAS3@28.0846,HEPG2@3.9787,HMEC@0,HSMM@0,HUVEC@0,K562@0.0185255,MCF7@0.039611,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000251388.1 ENST00000507844.1 chr4:134792401-134931845 4 615 138823 intergenic 1.18 1 0,0,0 0 0,0,0 0 8.14852726133278 0 0 9.97835373100999 72.683 0 10.6182549001246 112.408 1 1 chimp,human,macaque,marmoset,orangutan, lincRNA lincRNA A549@0,AG04450@0.0104185,BJ@0.292202,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0.003928,K562@0.148514,MCF7@0.0098175,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000251199.1 ENST00000504728.1 chr4:135176328-135248625 3 741 71552 intergenic 0 0 0,1,0 1 0,0,0 0 8.94999440966011 0 0 12.9050900044723 0 193.975708502024 16.0936940966011 477.056 0 0 chimp,human,macaque,orangutan,rat, lincRNA processed_transcript A549@0,AG04450@0,BJ@0,GM12878@0.006262,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0.0027655,HUVEC@0,K562@2.45473,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000251199.1 ENST00000515491.1 chr4:135226557-135248604 3 857 21186 intergenic -6.59 0 0,1,0 1 0,0,0 0 10.7169829132446 0 0 20.1745964316058 0 151.106184364061 26.9012555461154 491.294 0 0 chimp,cow,dog,guinea_pig,human,macaque,marmoset,mouse,orangutan,panda,rat, lincRNA processed_transcript A549@0,AG04450@0,BJ@0,GM12878@0.006262,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0.0027655,HUVEC@0,K562@2.45473,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000251199.1 ENST00000506638.1 chr4:135228719-135248628 3 464 19441 intergenic -4.31 0 0,1,0 1 0,0,0 0 6.85587161154262 0 0 13.7034617560825 0 314.159482758621 21.9983025564529 475.022 0 0 chimp,guinea_pig,human,macaque,marmoset,opossum,orangutan, lincRNA processed_transcript A549@0,AG04450@0,BJ@0,GM12878@0.006262,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0.0027655,HUVEC@0,K562@2.45473,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000251291.1 ENST00000503009.1 chr4:135345022-135379007 3 427 33554 intergenic -2.37 0 0,1,0 0 0,0,0 0 2.34505573106038 55.678 10.5386416861827 5.90665792453955 47.867 11.4168618266979 7.85250640758181 39.779 1 1 chimp,human,macaque,marmoset,orangutan, lincRNA lincRNA A549@0.101065,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0.017026,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000249000.1 ENST00000504882.1 chr4:135680554-135738444 5 484 57398 intergenic -4.13 0 0,0,0 0 0,0,0 71.8512396694215 4.6803024495627 27.048 16.845041322314 5.10674587964737 6.405 17.154958677686 5.83739851562772 20.265 0 0 chimp,guinea_pig,human,macaque,marmoset,orangutan, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000249847.1 ENST00000514293.1 chr4:135854044-135855286 2 644 596 intergenic -4.50 0 0,0,0 0 0,0,0 131.85248447205 494.656040268456 0 155.017080745342 593.837248322148 1.38 169.596273291925 573.23322147651 1.506 0 0 cat,chimp,cow,dog,elephant,guinea_pig,horse,human,macaque,marmoset,mouse,orangutan,panda,pig,rabbit,rat, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000248434.1 ENST00000508605.1 chr4:135988388-135992533 2 665 3478 intergenic -0.16 0 0,0,0 0 0,0,0 0 0 0 0 3.81684876365727 0 0 6.55002875215641 0 0 0 chimp,human,marmoset,pig, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000248434.1 ENST00000514526.1 chr4:135988388-136018813 4 685 29734 intergenic 0.77 1 0,0,1 0 0,0,0 0 10.4572206901191 0 0 13.4161229568844 0 0 12.4830833389386 0 0 0 cat,chimp,cow,dog,elephant,horse,human,macaque,marmoset,orangutan,panda,pig,rabbit, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000248434.1 ENST00000509713.1 chr4:136013549-136018804 3 281 4970 intergenic 0.57 1 0,0,1 0 0,0,0 0 0 142.38 0 0 173.376 0 1.48712273641851 146.176 1 1 chimp,human,macaque,marmoset,orangutan, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000248456.1 ENST00000511899.1 chr4:136034060-136044892 3 767 10061 intergenic 3.48 0 0,1,0 0 0,0,0 3.28552803129074 4.2190637113607 11.44 4.91525423728814 8.90825961634032 3.824 5.33246414602347 8.83560282278104 3.888 0 0 cat,chimp,human,macaque,marmoset,orangutan,panda, lincRNA lincRNA A549@0.002819,AG04450@0.0041875,BJ@0.016747,GM12878@0,H1HESC@0.0032135,HELAS3@0.0183665,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0.0031895,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0.005893, 0 0 0 0 ENSG00000248456.1 ENST00000506412.1 chr4:136042423-136044934 3 286 2221 intergenic -0.54 0 0,1,0 0 0,0,0 0 0 11.44 0 8.12291760468258 3.824 0 8.4876181900045 3.888 1 1 chimp,human,macaque,marmoset,orangutan, lincRNA lincRNA A549@0.002819,AG04450@0.0041875,BJ@0.016747,GM12878@0,H1HESC@0.0032135,HELAS3@0.0183665,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0.0031895,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0.005893, 1 96 0 0 ENSG00000250865.1 ENST00000511234.1 chr4:136713539-136727059 3 561 12955 intergenic -0.92 1 0,0,0 0 0,0,0 0 1.45233500578927 0 0 2.04392126592049 0 0 3.46252412196063 0 1 1 chimp,human,macaque,marmoset,orangutan, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0.007291,NHEK@0,NHLF@0,SKNSHRA@0, 1 96 0 0 ENSG00000248330.1 ENST00000505952.1 chr4:136788138-136789059 2 257 662 intergenic -10.52 1 0,0,0 0 0,0,0 0 28.0966767371601 0 0 13.9108761329305 0 0 22.7885196374622 0 0 0 chimp,cow,dog,horse,human,macaque,marmoset,orangutan,panda,rabbit, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000248330.1 ENST00000508714.1 chr4:136788145-136834835 3 320 46366 intergenic -5.36 1 0,0,0 0 0,0,0 46.58125 1.93001337186732 4.626 0 3.7051718931976 0 0 6.68090842427641 0 0 0 chimp,cow,dog,elephant,guinea_pig,horse,human,macaque,marmoset,orangutan,panda,rabbit, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000248330.1 ENST00000504365.1 chr4:136788158-136809245 4 463 20618 intergenic -10.52 1 0,1,0 0 0,0,0 0 3.79178387816471 0 0 2.46823164225434 0 0 3.6460859443205 0 0 0 chimp,cow,dog,elephant,horse,human,macaque,marmoset,orangutan,panda,rabbit, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000251567.1 ENST00000513332.1 chr4:137039830-137202449 4 871 161742 intergenic -0.68 1 0,0,0 0 0,0,0 0 6.28509601711368 0 0 7.51287235226472 0 0 8.46758417726997 0 1 1 chimp,human,macaque,marmoset,orangutan, processed_transcript processed_transcript A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0.0043695,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0.0056685,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0.012785, 0 0 0 0 ENSG00000250665.1 ENST00000511749.1 chr4:137047064-137060029 3 500 12461 intergenic -1.62 0 0,0,0 0 0,0,0 0 7.76037236176872 0 0 7.8536233047107 0 0 7.97696814059867 0 0 1 chimp,human, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000251567.1 ENST00000500324.2 chr4:137094354-137316626 3 522 221746 intergenic 0 0 0,1,1 0 0,0,0 0 5.59945613449623 0 0 9.50858640065661 0 0 10.9701911195692 0 0 0 chimp,elephant,human,marmoset, processed_transcript processed_transcript A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0.0043695,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0.0056685,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0.012785, 49 3 0 0 ENSG00000248869.1 ENST00000505736.1 chr4:137717877-138133953 4 1664 414406 intergenic 0.49 1 0,1,0 0 0,0,0 0 8.97533336872536 0 0 10.2445138342592 0 0 12.3026910807276 0 0 0 cat,chimp,cow,dog,elephant,horse,human,macaque,marmoset,orangutan,panda,pig,rabbit, lincRNA lincRNA A549@0.0013015,AG04450@0.0271585,BJ@0.010031,GM12878@0.0457165,H1HESC@0.0133805,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0.051375,HUVEC@0,K562@0.0193745,MCF7@0,NHEK@0,NHLF@0.126778,SKNSHRA@0.00575, 0 0 0 0 ENSG00000248869.1 ENST00000512039.1 chr4:137730224-137842536 4 315 111991 intergenic -1.62 0 0,0,0 0 0,0,0 0 12.0356725093981 0 0 12.1680581475297 0 0 12.0281183309373 0 0 0 cat,chimp,cow,horse,human,macaque,marmoset,orangutan,panda,rabbit, lincRNA lincRNA A549@0.0013015,AG04450@0.0271585,BJ@0.010031,GM12878@0.0457165,H1HESC@0.0133805,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0.051375,HUVEC@0,K562@0.0193745,MCF7@0,NHEK@0,NHLF@0.126778,SKNSHRA@0.00575, 0 0 0 0 ENSG00000250341.1 ENST00000509798.1 chr4:138114910-138119521 2 1574 3035 intergenic 5.72 1 0,0,1 0 0,0,0 0 0 0 17.2369758576874 6.26952224052718 0 19.3659466327827 6.63855024711697 0 0 0 chimp,guinea_pig,human,macaque,marmoset,mouse,orangutan,rabbit,rat, lincRNA lincRNA A549@0,AG04450@0.0014945,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0.012243,SKNSHRA@0, 0 0 0 0 ENSG00000251632.1 ENST00000507365.1 chr4:138466885-138524584 2 2262 55435 intergenic 1.03 1 0,0,0 0 0,0,0 50.9173297966401 14.0083160458194 0 35.9195402298851 22.7531884188689 0 29.3125552608311 21.6872914223866 0 0 0 cat,chimp,cow,dog,elephant,guinea_pig,horse,human,macaque,marmoset,opossum,orangutan,pig,rabbit,rat, lincRNA lincRNA A549@0,AG04450@0,BJ@0.0128365,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0.0018175,HUVEC@0,K562@0.002365,MCF7@0,NHEK@0,NHLF@0.0085225,SKNSHRA@0, 0 0 0 0 ENSG00000250126.1 ENST00000505454.1 chr4:138566419-138576328 4 392 9511 intergenic 0 1 0,0,0 0 0,0,0 0 17.9078961202818 18.352 0 14.6935127746819 26.288 0 15.6616549258753 27.023 1 1 chimp,human,macaque,marmoset,orangutan, lincRNA lincRNA A549@0,AG04450@0.0345345,BJ@0.061322,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0.011727,MCF7@0,NHEK@0,NHLF@0.029235,SKNSHRA@0, 0 0 0 0 ENSG00000250777.1 ENST00000510922.1 chr4:138611631-138656131 5 507 43985 intergenic 0.69 1 0,1,0 0 0,0,0 0 6.86333977492327 0 8.7258382642998 12.3065363191997 0 17.0729783037475 12.9650335341594 0 0 0 cat,chimp,cow,dog,guinea_pig,horse,human,macaque,marmoset,orangutan,panda,rabbit, lincRNA lincRNA A549@0,AG04450@0,BJ@0.0048085,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000250034.1 ENST00000506420.1 chr4:138728860-138737556 2 256 8438 intergenic -5.53 1 0,1,0 0 0,0,0 0 0 0 0 1.70940981275184 0 0 1.76736193410761 0 0 0 chimp,horse,human,macaque,orangutan, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000248307.1 ENST00000514600.1 chr4:138948576-139051839 11 2006 101237 intergenic 3.55 1 0,1,0 0 0,0,0 64.2851445663011 13.5343303337713 0 40.5722831505484 14.5879668500647 0 34.7916251246261 15.0291296660312 0 0 0 chimp,human,macaque,marmoset,orangutan,rat, lincRNA lincRNA A549@0.0125615,AG04450@0.005697,BJ@0,GM12878@0,H1HESC@0,HELAS3@0.0020695,HEPG2@0.037963,HMEC@0,HSMM@0,HUVEC@0.0032085,K562@0,MCF7@0,NHEK@0,NHLF@0.0009565,SKNSHRA@0, 0 0 0 0 ENSG00000248307.1 ENST00000505874.1 chr4:138953508-139012193 2 258 58425 intergenic 0 1 0,0,0 0 0,0,0 74.953488372093 9.5880701754386 0 118.422480620155 14.1982370560548 0 93.4457364341085 15.031972614463 0 0 0 cat,chimp,cow,human,macaque,marmoset,mouse,orangutan,rabbit, lincRNA lincRNA A549@0.0125615,AG04450@0.005697,BJ@0,GM12878@0,H1HESC@0,HELAS3@0.0020695,HEPG2@0.037963,HMEC@0,HSMM@0,HUVEC@0.0032085,K562@0,MCF7@0,NHEK@0,NHLF@0.0009565,SKNSHRA@0, 0 0 0 0 ENSG00000248307.1 ENST00000503208.1 chr4:138953606-138970726 4 494 16620 intergenic -2.38 1 0,1,0 0 0,0,0 36.3400809716599 8.69229843561974 15.774 38.5465587044534 13.4490974729242 39.197 12.9291497975709 14.2184115523466 33.811 0 0 cat,chimp,cow,dog,elephant,guinea_pig,horse,human,macaque,marmoset,mouse,orangutan,rabbit,rat, lincRNA lincRNA A549@0.0125615,AG04450@0.005697,BJ@0,GM12878@0,H1HESC@0,HELAS3@0.0020695,HEPG2@0.037963,HMEC@0,HSMM@0,HUVEC@0.0032085,K562@0,MCF7@0,NHEK@0,NHLF@0.0009565,SKNSHRA@0, 0 0 0 0 ENSG00000250033.1 ENST00000510066.1 chr4:138978618-139019871 4 813 40434 intergenic 1.87 1 0,1,0 0 0,0,0 399.409594095941 10.0774595637335 0 197.853628536285 12.1385714992333 0 196.178351783518 13.103526734926 0 0 0 cat,chimp,cow,dog,elephant,guinea_pig,horse,human,macaque,marmoset,opossum,orangutan,panda,rabbit,rat, antisense antisense A549@0.093064,AG04450@0.045357,BJ@0.00528,GM12878@0.0117875,H1HESC@0,HELAS3@0.0239065,HEPG2@0.01699,HMEC@0,HSMM@0,HUVEC@0.139638,K562@0.0225595,MCF7@0,NHEK@0.011153,NHLF@0.0043035,SKNSHRA@0.002975, 0 0 0 0 ENSG00000250033.1 ENST00000510767.1 chr4:139010168-139099331 7 4647 84504 exonic 0.94 1 0,1,0 0 0,0,0 48.9279104798795 19.4038862065701 0 31.4697654400689 19.5191943576635 0 31.6998063266624 21.693186121367 0 0 1 chimp,human,macaque,orangutan, antisense antisense A549@0.093064,AG04450@0.045357,BJ@0.00528,GM12878@0.0117875,H1HESC@0,HELAS3@0.0239065,HEPG2@0.01699,HMEC@0,HSMM@0,HUVEC@0.139638,K562@0.0225595,MCF7@0,NHEK@0.011153,NHLF@0.0043035,SKNSHRA@0.002975, 0 0 0 0 ENSG00000248307.1 ENST00000512536.1 chr4:139019344-139051863 4 564 31949 intergenic 3.55 0 0,1,0 0 0,0,0 89.4148936170213 24.4120003755986 0 14.813829787234 20.005759178691 0 4.99468085106383 19.7326050893612 0 1 1 chimp,human,macaque,marmoset,orangutan, lincRNA lincRNA A549@0.0125615,AG04450@0.005697,BJ@0,GM12878@0,H1HESC@0,HELAS3@0.0020695,HEPG2@0.037963,HMEC@0,HSMM@0,HUVEC@0.0032085,K562@0,MCF7@0,NHEK@0,NHLF@0.0009565,SKNSHRA@0, 0 0 0 0 ENSG00000250033.1 ENST00000512786.1 chr4:139026549-139095731 4 686 68490 exonic -3.22 0 0,0,0 0 0,0,0 0 13.1988465469412 86.716 19.4314868804665 16.364914586071 46.689 20.1909620991254 18.5563731931669 44.1 0 0 chimp,horse,human,macaque,marmoset,orangutan, antisense antisense A549@0.093064,AG04450@0.045357,BJ@0.00528,GM12878@0.0117875,H1HESC@0,HELAS3@0.0239065,HEPG2@0.01699,HMEC@0,HSMM@0,HUVEC@0.139638,K562@0.0225595,MCF7@0,NHEK@0.011153,NHLF@0.0043035,SKNSHRA@0.002975, 0 0 0 0 ENSG00000250033.1 ENST00000514752.1 chr4:139026873-139090561 2 762 62924 exonic 0.05 0 0,0,0 0 0,0,0 0 12.2103331002479 0 0 16.4908143156824 0 0 19.2804971076219 0 0 0 cat,chimp,cow,dog,elephant,guinea_pig,horse,human,macaque,marmoset,orangutan,panda,rabbit, antisense retained_intron A549@0.093064,AG04450@0.045357,BJ@0.00528,GM12878@0.0117875,H1HESC@0,HELAS3@0.0239065,HEPG2@0.01699,HMEC@0,HSMM@0,HUVEC@0.139638,K562@0.0225595,MCF7@0,NHEK@0.011153,NHLF@0.0043035,SKNSHRA@0.002975, 0 0 0 0 ENSG00000248307.1 ENST00000513895.1 chr4:139036605-139051842 4 562 14669 intergenic 5.63 1 0,1,1 0 0,0,0 0 0 0 0 0 0 0 0 0 0 1 chimp,human,macaque,orangutan, lincRNA lincRNA A549@0.0125615,AG04450@0.005697,BJ@0,GM12878@0,H1HESC@0,HELAS3@0.0020695,HEPG2@0.037963,HMEC@0,HSMM@0,HUVEC@0.0032085,K562@0,MCF7@0,NHEK@0,NHLF@0.0009565,SKNSHRA@0, 0 0 0 0 ENSG00000250033.1 ENST00000512538.1 chr4:139092784-139095924 2 374 2764 exonic -1.37 1 0,1,0 0 0,0,0 0 35.9189580318379 36.386 0 29.8541968162084 13.978 0 21.9782923299566 10.823 0 0 cat,chimp,dog,elephant,guinea_pig,horse,human,macaque,marmoset,orangutan,panda,rabbit, antisense antisense A549@0.093064,AG04450@0.045357,BJ@0.00528,GM12878@0.0117875,H1HESC@0,HELAS3@0.0239065,HEPG2@0.01699,HMEC@0,HSMM@0,HUVEC@0.139638,K562@0.0225595,MCF7@0,NHEK@0.011153,NHLF@0.0043035,SKNSHRA@0.002975, 0 0 0 0 ENSG00000249091.1 ENST00000507220.1 chr4:139198269-139202938 2 403 4264 intergenic -4.41 1 0,1,0 0 0,0,0 0 0 0 4.92307692307692 0 0 4.98263027295285 0 0 0 1 chimp,human, lincRNA lincRNA A549@0,AG04450@0.0110685,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0.00977233,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000248397.1 ENST00000504369.1 chr4:139220010-139233812 2 453 13347 intergenic -2.00 0 0,0,0 0 0,0,0 0 11.3588072225968 0 0 10.8277515546565 0 5.36423841059603 11.1126844983892 0 0 1 chimp,human,orangutan, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0.068183,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0.012223, 0 0 0 0 ENSG00000251372.1 ENST00000502757.1 chr4:139230865-139234874 2 565 3442 intergenic 1.67 0 0,0,0 0 0,0,0 0 0 0 0 0 0 0 0 0 1 1 chimp,human,macaque,marmoset,orangutan, lincRNA lincRNA A549@0.0048715,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000251372.1 ENST00000507145.1 chr4:139230866-139345498 3 537 114091 intergenic 0.41 0 0,0,0 0 0,0,0 0 30.2160906644696 0 0 25.7563699152431 0 0 26.1320875441534 0 0 0 chimp,human,macaque,marmoset,orangutan,pig, lincRNA lincRNA A549@0.0048715,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000251372.1 ENST00000515282.1 chr4:139230896-139270987 4 575 39510 intergenic 0.98 0 0,0,0 0 0,0,0 0 27.9135914958238 0 0 22.7389521640091 0 0 23.5408504176158 0 0 0 chimp,horse,human,macaque,marmoset,orangutan, lincRNA lincRNA A549@0.0048715,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000251372.1 ENST00000510736.1 chr4:139230896-139345303 4 583 113818 intergenic -2.22 0 0,0,0 0 0,0,0 0 30.2885659561756 0 0 25.8181482718023 0 0 26.1947670842925 0 0 0 cat,chimp,horse,human,macaque,marmoset,orangutan, lincRNA lincRNA A549@0.0048715,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000249381.1 ENST00000515860.1 chr4:139346677-139358023 2 537 10807 intergenic 4.70 0 0,0,1 0 0,0,0 0 5.90978069769594 0 0 11.1005829554918 0 0 10.0611640603313 0 0 0 chimp,cow,dog,guinea_pig,horse,human,macaque,marmoset,orangutan,panda,pig, lincRNA lincRNA A549@0.010249,AG04450@0,BJ@0,GM12878@0.04227,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0.0146963,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000250977.1 ENST00000506232.1 chr4:139585879-139586723 2 561 281 intergenic 0.13 0 0,0,0 0 0,0,0 0 0 109.195 0 0 137.617 0 0 115.185 0 0 chimp,cow,elephant,guinea_pig,horse,human,macaque,marmoset,orangutan,panda,rabbit, lincRNA lincRNA A549@0,AG04450@0.0057275,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0.017136,SKNSHRA@0.013592, 0 0 0 0 ENSG00000250501.1 ENST00000508418.1 chr4:139694699-139722343 3 574 27066 intergenic 2.35 0 1,1,1 0 0,0,0 17.0714285714286 31.0453705756299 11.233 23.3344947735192 29.8399467967191 7.392 24.1184668989547 30.0010345082391 8.316 0 0 cat,chimp,cow,dog,elephant,guinea_pig,horse,human,macaque,marmoset,mouse,orangutan,panda,pig,rabbit,rat, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0.004791,HELAS3@0.0410885,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0.0797905,K562@10.9305,MCF7@0,NHEK@0.00152467,NHLF@0.0027175,SKNSHRA@0, 0 0 0 0 ENSG00000250501.1 ENST00000502606.1 chr4:139694704-139722793 2 864 27223 intergenic -4.51 0 0,1,0 0 0,0,0 9.95833333333333 30.8663262682291 12.428 12.6319444444444 29.7589538258091 7.392 14.1134259259259 29.9231532160306 8.316 0 0 cat,chimp,dog,guinea_pig,horse,human,macaque,marmoset,mouse,orangutan,panda,pig,rabbit, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0.004791,HELAS3@0.0410885,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0.0797905,K562@10.9305,MCF7@0,NHEK@0.00152467,NHLF@0.0027175,SKNSHRA@0, 0 0 0 0 ENSG00000250501.1 ENST00000513400.1 chr4:139694742-139722483 4 714 27021 intergenic 2.35 0 0,1,1 0 0,0,0 11.046218487395 31.0970726472003 13.384 18.7591036414566 29.88964139003 7.392 20.7058823529412 30.050997372414 8.316 0 0 cat,chimp,cow,dog,elephant,guinea_pig,human,macaque,marmoset,mouse,orangutan,panda,pig,rabbit, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0.004791,HELAS3@0.0410885,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0.0797905,K562@10.9305,MCF7@0,NHEK@0.00152467,NHLF@0.0027175,SKNSHRA@0, 0 0 0 0 ENSG00000250195.1 ENST00000505607.1 chr4:139741108-139742619 2 198 1311 intergenic -1.77 0 0,0,0 0 0,0,0 121.015151515152 10.2364607170099 0 152.636363636364 40.3005339435545 32.206 185.570707070707 35.0312738367658 37.259 0 0 cat,chimp,cow,elephant,horse,human,macaque,marmoset,orangutan,pig,rabbit, antisense antisense A549@0.0076975,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000250195.1 ENST00000511951.1 chr4:139741111-139933800 3 279 192406 intergenic -1.77 1 0,0,0 0 0,0,0 80.6236559139785 31.9682702202634 0 102.064516129032 25.804855357941 7.89 125.189964157706 27.7701734873133 8.34 0 0 cat,chimp,cow,dog,elephant,guinea_pig,horse,human,macaque,marmoset,mouse,orangutan,panda,pig,rabbit,rat, antisense antisense A549@0.0076975,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000250195.1 ENST00000507038.1 chr4:139741114-139859135 3 418 117599 intergenic 1.77 1 0,0,0 0 0,0,0 106.753588516746 48.4612369152799 83.158 163.911483253589 38.6616042653424 88.261 178.834928229665 41.2965161268378 100.801 0 0 cat,chimp,cow,dog,elephant,guinea_pig,horse,human,macaque,marmoset,mouse,orangutan,panda,pig,rabbit,rat, antisense antisense A549@0.0076975,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000250577.1 ENST00000506416.1 chr4:139845084-139845386 1 302 0 intergenic 0 0 0,0,1 0 0,0,0 0 0 0 0 0 36.079 0 0 56.503 1 1 chimp,human,macaque,marmoset,orangutan, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0.0183545, 192 2 0 0 ENSG00000250698.1 ENST00000509184.1 chr4:141049169-141055719 3 654 5892 intronic -2.91 0 0,0,0 0 0,0,0 0 27.2316700610998 0 4.38532110091743 28.8070264765784 12.827 6.14067278287462 30.9758995247794 19.337 0 0 cat,chimp,cow,dog,elephant,guinea_pig,horse,human,macaque,marmoset,orangutan,panda,rabbit, antisense antisense A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000196951.5 ENST00000512692.1 chr4:141204880-141294514 5 1980 87646 intronic -1.13 0 1,1,1 1 0,1,0 57.4747474747475 17.31961527052 0 59.9191919191919 15.9042968304315 27.251 61.3964646464647 21.419711110604 30.536 0 0 cat,chimp,dog,human,macaque,marmoset,orangutan,rabbit, lincRNA processed_transcript A549@0.235117,AG04450@0.0357095,BJ@0.00548,GM12878@0.149855,H1HESC@0.042666,HELAS3@0.035748,HEPG2@0.0842925,HMEC@0.00507,HSMM@0.0242705,HUVEC@0.057404,K562@0.072525,MCF7@0,NHEK@0.0191037,NHLF@0.0407285,SKNSHRA@0.267903, 0 0 0 0 ENSG00000248335.1 ENST00000503844.1 chr4:141633322-141637235 2 400 3511 intronic -2.80 0 0,0,1 0 0,0,0 0 0 0 0 1.19396183423526 8.534 0 1.66021076616349 8.935 0 0 cat,chimp,elephant,horse,human,macaque,marmoset,orangutan,panda,pig,rabbit, antisense antisense A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000248747.1 ENST00000514347.1 chr4:142161893-142199943 3 1034 37012 intergenic 2.71 0 0,0,0 0 0,0,0 0 0.702907165243705 0 0 2.00726791310926 0 0 2.64595266400086 0 1 1 chimp,human,macaque,marmoset,orangutan, lincRNA lincRNA A549@0,AG04450@0.004323,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0.0039685,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000248810.1 ENST00000506645.1 chr4:142240604-142244716 2 590 3520 intergenic -0.41 0 0,0,1 0 0,0,0 0 0 0 6.07627118644068 0 8.075 6.38135593220339 1.17357954545455 8.4 0 0 cat,chimp,cow,elephant,horse,human,macaque,marmoset,orangutan,panda,pig, lincRNA lincRNA A549@0.117631,AG04450@0.11581,BJ@0.683118,GM12878@0,H1HESC@0.271934,HELAS3@0.036506,HEPG2@0.006052,HMEC@0.011739,HSMM@0.020032,HUVEC@0.306751,K562@9.52849,MCF7@0,NHEK@0.0289697,NHLF@0.0970695,SKNSHRA@0.074675, 0 0 0 0 ENSG00000248810.1 ENST00000509161.1 chr4:142242283-142247161 2 2837 2039 intergenic 0.30 0 0,1,1 0 0,0,0 2.75643285160381 0 0 10.6591469862531 0 0 11.4536482199507 2.02599313388916 0 0 0 cat,chimp,horse,human,macaque,marmoset,orangutan,rabbit, lincRNA lincRNA A549@0.117631,AG04450@0.11581,BJ@0.683118,GM12878@0,H1HESC@0.271934,HELAS3@0.036506,HEPG2@0.006052,HMEC@0.011739,HSMM@0.020032,HUVEC@0.306751,K562@9.52849,MCF7@0,NHEK@0.0289697,NHLF@0.0970695,SKNSHRA@0.074675, 0 0 0 0 ENSG00000248810.1 ENST00000511213.1 chr4:142244625-142253772 3 716 8427 intergenic -0.38 0 0,1,0 1 0,0,0 0 9.55856176575294 0 0 5.66002135991456 0 0 6.87907915035006 0 1 1 chimp,human,macaque,marmoset,orangutan, lincRNA lincRNA A549@0.117631,AG04450@0.11581,BJ@0.683118,GM12878@0,H1HESC@0.271934,HELAS3@0.036506,HEPG2@0.006052,HMEC@0.011739,HSMM@0.020032,HUVEC@0.306751,K562@9.52849,MCF7@0,NHEK@0.0289697,NHLF@0.0970695,SKNSHRA@0.074675, 9 6 0 0 ENSG00000250141.1 ENST00000508388.1 chr4:142491084-142497230 2 136 6008 intergenic 0 0 0,0,0 0 0,0,0 0 1.63099201065246 0 0 11.9196071904128 0 0 11.9667110519308 0 0 0 NA lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000251248.1 ENST00000514766.1 chr4:143435599-143440136 2 438 4097 intronic 3.95 1 0,1,1 0 0,0,0 0 3.31584085916524 0 0 9.73761288747864 0 3.21917808219178 15.7954600927508 0 0 0 chimp,cow,horse,human,macaque,orangutan,panda,pig, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0.083754,HSMM@0,HUVEC@0,K562@0,MCF7@0.004673,NHEK@0.00580233,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000249806.1 ENST00000509497.1 chr4:143487172-143582103 3 509 94418 exonic -0.49 0 0,1,0 0 0,0,0 0 4.70632718337605 13.862 4.00785854616896 2.8319705988265 4.335 4.07072691552063 3.92962147048232 4.624 0 0 chimp,cow,human,macaque,marmoset,orangutan, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@1.76674,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0.223925,HSMM@0,HUVEC@0,K562@0,MCF7@0.0078535,NHEK@0.54395,NHLF@0.0716035,SKNSHRA@0, 0 0 0 0 ENSG00000250326.1 ENST00000507826.1 chr4:143854348-144106014 3 576 251086 intergenic 7.96 0 0,1,0 0 0,0,0 11.9739583333333 3.4049170403766 294.632 6.14236111111111 4.57260062289415 272.964 8.37152777777778 6.92234533187832 248.708 0 0 cat,chimp,cow,horse,human,macaque,marmoset,orangutan,panda,rabbit, antisense antisense A549@0.0584905,AG04450@0.085367,BJ@0.130904,GM12878@0.238324,H1HESC@0.0664145,HELAS3@0.0784115,HEPG2@0.0404795,HMEC@0.026974,HSMM@0.0669455,HUVEC@0.0071245,K562@0.103673,MCF7@0.075293,NHEK@0.019844,NHLF@0.055666,SKNSHRA@0.30932, 0 0 0 0 ENSG00000250326.1 ENST00000507486.1 chr4:144098813-144105982 2 757 6410 intergenic 4.05 0 0,1,0 0 0,0,0 0 0.847737909516381 275.176 4.67371202113606 0 251.94 6.36988110964333 0.900624024960998 227.876 0 1 chimp,human,macaque,orangutan, antisense antisense A549@0.0584905,AG04450@0.085367,BJ@0.130904,GM12878@0.238324,H1HESC@0.0664145,HELAS3@0.0784115,HEPG2@0.0404795,HMEC@0.026974,HSMM@0.0669455,HUVEC@0.0071245,K562@0.103673,MCF7@0.075293,NHEK@0.019844,NHLF@0.055666,SKNSHRA@0.30932, 0 0 0 0 ENSG00000250969.1 ENST00000512715.1 chr4:144207446-144251011 2 622 42941 intergenic 3.95 0 0,1,0 0 0,0,0 0 12.4719731724925 50.76 0 12.3279383339932 66.434 0 13.1510211685801 72.502 0 1 human,macaque, lincRNA lincRNA A549@0,AG04450@0.0094885,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0.003295,NHEK@0,NHLF@0,SKNSHRA@0, 25 4 0 0 ENSG00000245112.2 ENST00000500800.2 chr4:144434625-144435788 2 943 218 exonic 17.73 0 0,1,1 1 0,0,0 103.845174973489 0 27.959 153.513255567338 0 39.244 144.862142099682 0 38.776 0 0 cat,chimp,cow,dog,elephant,guinea_pig,horse,human,macaque,marmoset,mouse,orangutan,panda,pig,rabbit,rat, antisense antisense A549@0.002923,AG04450@0.174851,BJ@0.121913,GM12878@0.0092275,H1HESC@0.138036,HELAS3@0.097143,HEPG2@0.0393575,HMEC@0.112656,HSMM@1.5751,HUVEC@0.311774,K562@0.049286,MCF7@0.010752,NHEK@0.024848,NHLF@0.22044,SKNSHRA@0.0983505, 0 0 0 0 ENSG00000246448.2 ENST00000499587.2 chr4:144621410-144786225 7 559 164244 exonic -1.15 0 0,1,0 0 0,0,0 27.3703041144902 0.711368451815591 68.999 0 2.39766445045177 63.963 13.8676207513417 6.70836682009693 282.236 1 1 chimp,human,macaque,marmoset,orangutan, antisense antisense A549@0.0186385,AG04450@0.08368,BJ@0.275745,GM12878@0,H1HESC@0.010501,HELAS3@0.0368735,HEPG2@0.057494,HMEC@0,HSMM@0,HUVEC@0.0882535,K562@0,MCF7@0.0125275,NHEK@0.0361033,NHLF@0.010227,SKNSHRA@0.242999, 0 0 0 0 ENSG00000251600.1 ENST00000509873.1 chr4:144833484-144903607 7 1296 68815 intergenic 2.10 1 0,0,1 0 0,0,0 0 0.204606553803677 0 0 2.208675434135 255.528 0 3.6832812613529 524.55 0 0 chimp,horse,human,macaque,marmoset,orangutan, lincRNA processed_transcript A549@0,AG04450@0.009698,BJ@0.0217015,GM12878@0.005397,H1HESC@0,HELAS3@0.0203615,HEPG2@0.0784365,HMEC@0,HSMM@0,HUVEC@0.024285,K562@0.0513965,MCF7@0,NHEK@0,NHLF@0.002424,SKNSHRA@0.027154, 0 0 0 0 ENSG00000251600.1 ENST00000510536.1 chr4:144859020-144903069 4 406 43637 intergenic 2.10 1 0,0,0 0 0,0,0 0 0.322661961179733 0 0 2.45642459380801 0 0 4.19955542315008 6.275 0 0 cat,chimp,elephant,human,macaque,marmoset,orangutan, lincRNA processed_transcript A549@0,AG04450@0.009698,BJ@0.0217015,GM12878@0.005397,H1HESC@0,HELAS3@0.0203615,HEPG2@0.0784365,HMEC@0,HSMM@0,HUVEC@0.024285,K562@0.0513965,MCF7@0,NHEK@0,NHLF@0.002424,SKNSHRA@0.027154, 0 0 0 0 ENSG00000248828.1 ENST00000506982.1 chr4:144874788-145047512 5 827 171889 intronic -0.94 0 0,0,0 0 0,0,0 0 0.29342773534083 0 0 1.84288697938786 0 0 3.23037541669333 0 0 0 chimp,elephant,horse,human,macaque,marmoset,orangutan,pig,rabbit, processed_transcript processed_transcript A549@0,AG04450@0.005697,BJ@0.0212705,GM12878@0.0031915,H1HESC@0.00748,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0.112902,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0.023858, 0 0 0 0 ENSG00000251600.1 ENST00000505000.1 chr4:144898385-144903069 4 792 3886 intergenic 3.77 1 0,0,0 0 0,0,0 0 0 0 0 3.44621718991251 0 0 4.72233659289758 3.402 0 0 chimp,dog,elephant,horse,human,macaque,marmoset,orangutan, lincRNA processed_transcript A549@0,AG04450@0.009698,BJ@0.0217015,GM12878@0.005397,H1HESC@0,HELAS3@0.0203615,HEPG2@0.0784365,HMEC@0,HSMM@0,HUVEC@0.024285,K562@0.0513965,MCF7@0,NHEK@0,NHLF@0.002424,SKNSHRA@0.027154, 0 0 0 0 ENSG00000248890.1 ENST00000508269.1 chr4:145564074-145567139 2 1092 1971 intergenic -0.16 0 1,1,1 1 0,0,0 6.92307692307692 0 431.388 2.40750915750916 13.5230847285642 450.321 2.60897435897436 16.5794013191273 415.552 0 0 cat,chimp,cow,dog,elephant,horse,human,macaque,orangutan,panda,pig, lincRNA processed_transcript A549@0.458448,AG04450@1.20746,BJ@0.307411,GM12878@0.32422,H1HESC@0.131834,HELAS3@0.0026055,HEPG2@0.0590185,HMEC@0.338838,HSMM@0.292774,HUVEC@16.2432,K562@0.026199,MCF7@0.021068,NHEK@0.165308,NHLF@0.433379,SKNSHRA@0.037449, 0 0 0 0 ENSG00000248890.1 ENST00000503066.1 chr4:145564376-145567064 3 894 1790 intergenic -0.16 0 0,1,1 1 0,0,0 0 0 412.672 0 14.8905027932961 417.703 0 18.2558659217877 387.652 0 0 chimp,human,macaque,marmoset,orangutan,pig, lincRNA processed_transcript A549@0.458448,AG04450@1.20746,BJ@0.307411,GM12878@0.32422,H1HESC@0.131834,HELAS3@0.0026055,HEPG2@0.0590185,HMEC@0.338838,HSMM@0.292774,HUVEC@16.2432,K562@0.026199,MCF7@0.021068,NHEK@0.165308,NHLF@0.433379,SKNSHRA@0.037449, 0 0 0 0 ENSG00000248890.1 ENST00000512359.1 chr4:145564524-145582509 4 642 17337 exonic 4.28 0 0,0,1 0 0,0,0 155.096573208723 155.156082367192 0 147.19937694704 147.887523793044 5.781 149.353582554517 145.803599238623 10.288 0 0 cat,chimp,dog,elephant,guinea_pig,horse,human,macaque,marmoset,orangutan,panda,rabbit, lincRNA processed_transcript A549@0.458448,AG04450@1.20746,BJ@0.307411,GM12878@0.32422,H1HESC@0.131834,HELAS3@0.0026055,HEPG2@0.0590185,HMEC@0.338838,HSMM@0.292774,HUVEC@16.2432,K562@0.026199,MCF7@0.021068,NHEK@0.165308,NHLF@0.433379,SKNSHRA@0.037449, 0 0 0 0 ENSG00000250406.1 ENST00000512833.1 chr4:145772724-145795939 2 2805 20408 intergenic -0.42 1 0,0,0 0 0,0,0 129.223529411765 25.875049000392 0 119.989304812834 21.3585358682869 0 125.367557932264 21.1768914151313 1.944 0 0 cat,chimp,cow,dog,horse,human,macaque,marmoset,orangutan,panda, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0.001478,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0.0017325,K562@0,MCF7@0,NHEK@0.00188133,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000250582.1 ENST00000508936.1 chr4:146418225-146424123 2 1088 4808 intronic 0.39 0 0,0,1 0 0,0,0 0 58.6788685524126 34.181 0 54.3038685524126 0 6.22977941176471 60.1745008319468 1.215 0 0 chimp,cow,elephant,guinea_pig,horse,human,macaque,marmoset,orangutan,panda,pig, antisense antisense A549@0,AG04450@0.0059165,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000250902.1 ENST00000513542.1 chr4:146435767-146438270 2 479 2022 exonic -0.47 0 0,0,1 0 0,0,0 457.985386221294 25.4327398615232 0 388.993736951983 8.36795252225519 1.736 500.263048016701 13.677546983185 2.331 0 0 cat,chimp,cow,dog,elephant,guinea_pig,horse,human,macaque,marmoset,mouse,opossum,orangutan,panda,pig,platypus,rabbit,rat, antisense antisense A549@0.014023,AG04450@0.051868,BJ@0.051185,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0.0048275,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0.126889, 0 0 0 0 ENSG00000248686.1 ENST00000504710.1 chr4:146520261-146521704 2 401 1040 intergenic -8.41 0 0,0,0 0 0,0,0 0 0 0 0 2.20673076923077 8.58 0 2.29326923076923 8.86 0 0 cat,chimp,horse,human,orangutan,pig, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000248356.1 ENST00000504555.1 chr4:146563488-146571776 2 743 7543 exonic 2.93 0 0,0,0 0 0,0,0 81.5881561238223 10.1498077687923 35.1 98.4670255720054 17.8894339122365 50.313 104.511440107672 17.8401166644571 58.82 0 0 cat,chimp,dog,elephant,horse,human,macaque,marmoset,panda,rabbit,rat, antisense antisense A549@0.0037075,AG04450@0.0133535,BJ@0,GM12878@0.009439,H1HESC@0.015626,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0.0409045,HUVEC@0,K562@0.0036585,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000251687.1 ENST00000514334.1 chr4:146754270-146760732 3 791 5667 intronic 5.36 0 0,0,0 0 0,0,0 75.0543615676359 0 0 50.8836915297092 0 0 62.8925410872313 0 0 0 1 chimp,human, antisense antisense A549@0.008495,AG04450@0,BJ@0,GM12878@0,H1HESC@0.340573,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 23 4 0 0 ENSG00000251024.1 ENST00000503593.1 chr4:146998998-147029309 3 519 29788 intergenic -0.83 0 0,0,0 0 0,0,0 10.1734104046243 10.6816167584262 8.36 15.6435452793834 16.0967503692762 24.66 15.7321772639692 19.3388612864241 42.996 0 0 chimp,elephant,guinea_pig,horse,human,macaque,marmoset,orangutan, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000248809.1 ENST00000512063.1 chr4:147030607-147043058 6 1169 11272 intergenic 2.08 1 0,0,0 0 0,0,0 16.5269461077844 18.6517033356991 0 12.7040205303678 2.51694464158978 0 13.8802395209581 3.65622782114975 0 1 1 chimp,human,macaque,marmoset,orangutan, lincRNA lincRNA A549@0.0019665,AG04450@0,BJ@0.002086,GM12878@0.014933,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000248809.1 ENST00000507726.1 chr4:147030609-147043065 5 1710 10738 intergenic 2.08 1 0,0,0 0 0,0,0 10.9216374269006 19.5792512572174 0 8.68479532163743 2.64211212516297 0 9.48888888888889 3.83805177872975 0 1 1 chimp,human,macaque,marmoset,orangutan, lincRNA lincRNA A549@0.0019665,AG04450@0,BJ@0.002086,GM12878@0.014933,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000248809.1 ENST00000515703.1 chr4:147031975-147032869 3 448 442 intergenic -4.73 0 0,0,0 0 0,0,0 0 0 0 0 15.3665158371041 0 0 16.0180995475113 0 0 0 chimp,horse,human,macaque,marmoset,orangutan,panda,pig, lincRNA lincRNA A549@0.0019665,AG04450@0,BJ@0.002086,GM12878@0.014933,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000248809.1 ENST00000505848.1 chr4:147032311-147032857 2 418 126 intergenic -4.73 0 0,0,0 0 0,0,0 0 0 0 0 0 0 0 0 0 0 0 chimp,dog,horse,human,macaque,marmoset,orangutan,panda,pig, lincRNA lincRNA A549@0.0019665,AG04450@0,BJ@0.002086,GM12878@0.014933,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000248809.1 ENST00000513023.1 chr4:147032582-147033362 3 408 368 intergenic 2.08 1 0,0,0 0 0,0,0 0 0 0 0 0 0 0 0 0 1 1 chimp,human,macaque,marmoset,orangutan, lincRNA lincRNA A549@0.0019665,AG04450@0,BJ@0.002086,GM12878@0.014933,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000251010.1 ENST00000510996.1 chr4:147162958-147164821 2 730 1131 intergenic -0.11 0 0,0,1 0 0,0,0 0 40.2077807250221 106.2 0 31.1679929266136 91.66 0 32.2873563218391 79.138 0 0 cat,chimp,cow,elephant,horse,human,macaque,marmoset,orangutan,panda, antisense antisense A549@0.0092145,AG04450@0.006124,BJ@0,GM12878@0.0110155,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0.005493,NHEK@0.0157483,NHLF@0,SKNSHRA@0.0113965, 0 0 0 0 ENSG00000248764.1 ENST00000515530.1 chr4:147855153-147866623 3 521 10945 intronic 0 0 0,0,0 0 0,0,0 0 52.0396528095021 31.354 0 53.3651895842851 48.633 0 53.6102329830973 53.508 0 0 chimp,dog,human,macaque,marmoset,orangutan,rabbit, antisense antisense A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000248346.1 ENST00000513711.1 chr4:147878590-147896466 4 439 17431 intergenic -0.39 0 0,0,0 0 0,0,0 0 10.2310825540703 0 0 17.5520050484769 4.216 0 19.4099018989157 4.403 0 0 chimp,cow,human,macaque,orangutan,panda, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000248346.1 ENST00000512752.1 chr4:147895010-147896609 2 516 1081 intergenic 0.10 0 0,0,0 0 0,0,0 0 0 53.055 0 0 87.472 0 5.10823311748381 101.719 0 0 chimp,cow,dog,guinea_pig,horse,human,macaque,orangutan,panda, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000251688.1 ENST00000509370.1 chr4:148488758-148515739 7 1021 25948 intergenic 2.46 0 0,0,0 0 0,0,0 0 10.0462463388315 0 0 11.3025281331895 0 0 15.3683906274087 0 0 1 chimp,human,macaque,orangutan, lincRNA lincRNA A549@0,AG04450@0.0021805,BJ@0.006296,GM12878@0,H1HESC@0,HELAS3@0.0051635,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0.054246,NHEK@0,NHLF@0,SKNSHRA@0.0412295, 0 0 0 0 ENSG00000251298.1 ENST00000508072.1 chr4:148530703-148538396 2 566 7125 intergenic -5.48 0 0,1,0 1 0,0,0 0 5.60056140350877 71.548 0 7.34512280701755 82.097 0 8.62835087719298 101.487 1 1 chimp,human,macaque,marmoset,orangutan, antisense antisense A549@0.0167385,AG04450@0,BJ@0,GM12878@0.0527445,H1HESC@0.042557,HELAS3@0.013323,HEPG2@0.0198065,HMEC@0,HSMM@0.0036225,HUVEC@0.0047015,K562@0.0445835,MCF7@0.014239,NHEK@0.0121773,NHLF@0.006794,SKNSHRA@0.121022, 1 96 0 0 ENSG00000250354.1 ENST00000514843.1 chr4:149067622-149130031 3 677 61728 intronic 0.60 0 0,0,0 0 0,0,0 0 21.1125745204769 0 0 16.5983994297563 0 0 18.3948451270088 0 0 0 cat,chimp,cow,elephant,horse,human,macaque,marmoset,orangutan,panda,pig,rabbit,rat, antisense antisense A549@0,AG04450@0,BJ@0,GM12878@0.0156205,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0.007854,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0.0222835, 0 0 0 0 ENSG00000250357.1 ENST00000504874.1 chr4:149614184-149615475 2 516 773 intergenic -4.57 0 0,0,0 0 0,0,0 75.0290697674419 0 173.057 78.5658914728682 0 173.803 128.062015503876 0 168.123 0 0 cat,chimp,cow,guinea_pig,horse,human,macaque,marmoset,orangutan,pig,rabbit, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0.003767,SKNSHRA@0, 0 0 0 0 ENSG00000249317.1 ENST00000504394.1 chr4:149862093-149863530 3 367 1066 intergenic -4.14 1 0,0,1 0 0,0,0 0 0 0 0 0 0 0 0 0 0 0 chimp,dog,human,macaque,marmoset,orangutan,panda,pig,rabbit, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000249317.1 ENST00000512989.1 chr4:149862101-149862929 2 367 459 intergenic -2.50 1 0,0,1 0 0,0,0 0 0 0 0 0 0 0 0 0 0 0 chimp,dog,human,macaque,marmoset,orangutan,panda,pig,rabbit, lincRNA retained_intron A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000249752.1 ENST00000507849.1 chr4:149948597-149983674 4 477 34594 intergenic 2.64 0 0,0,0 0 0,0,0 0 9.19555414233682 0 0 9.48147077527895 2.629 0 10.6165230964907 2.761 1 1 chimp,human,macaque,marmoset,orangutan, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000250252.1 ENST00000504755.1 chr4:150068954-150070932 2 474 1502 intergenic 3.43 1 0,0,0 0 0,0,0 127.139240506329 0 0 205.012658227848 4.67443408788282 0 229.989451476793 5.00066577896138 0 0 0 chimp,dog,horse,human,marmoset,orangutan, lincRNA lincRNA A549@0,AG04450@0,BJ@0.0203955,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0.004775, 0 0 0 0 ENSG00000248210.1 ENST00000503100.1 chr4:150075447-150199275 13 2507 121297 intergenic 5.35 1 0,1,0 0 0,0,0 29.7112086158756 15.6212684567632 0 23.6074990027922 16.7090117645119 0 21.6984443558038 18.8324855519922 0 0 0 chimp,dog,horse,human,macaque,orangutan,panda, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0.0007745,SKNSHRA@0, 0 0 0 0 ENSG00000234828.3 ENST00000506683.1 chr4:150273169-150474333 4 382 200776 intergenic -1.87 0 0,0,1 0 0,1,0 115.46335078534 18.1093905646093 0 268.641361256545 19.8424861537235 26.761 260.162303664921 21.3298252779217 19.6 0 0 cat,chimp,cow,dog,elephant,guinea_pig,horse,human,macaque,marmoset,mouse,opossum,orangutan,panda,pig,platypus,rabbit,rat, lincRNA lincRNA A549@0.005353,AG04450@0.0083985,BJ@0.0168445,GM12878@0,H1HESC@0.0064945,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0.005055,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000234828.3 ENST00000511993.1 chr4:150351084-150736980 17 2121 383743 intergenic 1.30 1 0,0,1 0 0,1,0 30.9500235737859 13.1870183951238 0 114.968882602546 14.3190937684857 9.215 113.638378123527 16.4120361804645 9.435 0 0 chimp,guinea_pig,horse,human,macaque,marmoset,opossum,orangutan,pig,rabbit, lincRNA lincRNA A549@0.005353,AG04450@0.0083985,BJ@0.0168445,GM12878@0,H1HESC@0.0064945,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0.005055,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000234828.3 ENST00000508106.1 chr4:150509142-150817385 7 697 307534 intergenic 1.30 0 0,0,0 0 0,1,0 36.5882352941176 11.243960017429 0 65.4074605451937 13.9343649807826 0 76.622668579627 16.4109626903042 0 0 0 cat,chimp,cow,dog,elephant,guinea_pig,horse,human,macaque,marmoset,mouse,orangutan,panda,pig,rabbit,rat, lincRNA lincRNA A549@0.005353,AG04450@0.0083985,BJ@0.0168445,GM12878@0,H1HESC@0.0064945,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0.005055,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000250905.1 ENST00000505781.1 chr4:150587209-150632301 3 507 44581 intergenic 0.96 0 0,0,0 0 0,0,0 0 14.8769879545098 20.68 3.62919132149901 20.3562055584217 23.312 0 20.122159664431 24.91 0 0 chimp,cow,dog,guinea_pig,human,macaque,marmoset,mouse,orangutan,pig,rabbit, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000234828.3 ENST00000502345.1 chr4:150654493-150736966 5 556 81909 intergenic -4.26 0 0,0,0 0 0,1,0 45.8669064748201 10.7865680206082 0 74.6906474820144 11.3837673515731 9.215 87.1942446043165 17.8119742641224 9.435 0 0 cat,chimp,cow,dog,elephant,guinea_pig,horse,human,macaque,marmoset,mouse,orangutan,panda,pig,rabbit,rat, lincRNA lincRNA A549@0.005353,AG04450@0.0083985,BJ@0.0168445,GM12878@0,H1HESC@0.0064945,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0.005055,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000234828.3 ENST00000510975.1 chr4:150658766-150736966 5 494 77698 intergenic -1.38 0 0,0,0 0 0,1,0 0.967611336032389 11.3339210790497 0 1.03238866396761 11.7520785605807 9.215 1.07287449392713 18.5190352390023 9.435 0 0 cat,chimp,cow,dog,horse,human,macaque,marmoset,orangutan,panda,pig,rabbit, lincRNA lincRNA A549@0.005353,AG04450@0.0083985,BJ@0.0168445,GM12878@0,H1HESC@0.0064945,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0.005055,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000250704.1 ENST00000505586.1 chr4:150877360-150879724 2 356 2006 intergenic -19.26 1 0,0,0 0 0,0,0 0 0 47.334 0 0 33.766 0 2.42273180458624 37.574 0 1 chimp,human,macaque,orangutan, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000249690.1 ENST00000507934.1 chr4:151500241-151502697 2 2207 247 intronic 8.81 0 0,0,0 0 0,0,0 84.1286814680562 348.259109311741 147.011 123.987766198459 393.2995951417 189.066 105.818305391935 430.987854251012 180.383 0 0 cat,chimp,elephant,guinea_pig,human,macaque,marmoset,mouse,orangutan,panda,pig, lincRNA processed_transcript A549@0,AG04450@0.0091105,BJ@0,GM12878@0,H1HESC@0.0026905,HELAS3@0,HEPG2@0,HMEC@0.1771,HSMM@0.003927,HUVEC@0,K562@0,MCF7@0.02478,NHEK@0,NHLF@0.0017665,SKNSHRA@0.0137365, 0 0 0 0 ENSG00000251611.1 ENST00000508847.1 chr4:152328703-152329987 2 356 926 intergenic 0 0 0,1,1 1 0,0,0 0 0 0 0 14.8164146868251 37.904 0 14.6274298056156 32.807 0 1 chimp,human,macaque,orangutan, lincRNA lincRNA A549@0.015431,AG04450@0,BJ@0.006877,GM12878@1.10161,H1HESC@1.4441,HELAS3@0.519615,HEPG2@0.486167,HMEC@0.125813,HSMM@0.097237,HUVEC@0.006792,K562@0.0555055,MCF7@0.676253,NHEK@0.289152,NHLF@0,SKNSHRA@0.034072, 0 0 0 0 ENSG00000251603.1 ENST00000508664.1 chr4:152588376-152591654 2 302 2974 intergenic 0 1 0,1,1 0 0,0,0 71.953642384106 13.3315400134499 0 142.337748344371 14.3419636852724 2.352 156.53642384106 19.4445191661063 5.508 0 0 cat,chimp,cow,dog,elephant,horse,human,macaque,marmoset,orangutan,panda,pig, antisense antisense A549@0.009086,AG04450@0,BJ@0.0079605,GM12878@0.469737,H1HESC@1.4906,HELAS3@0.464836,HEPG2@0.279763,HMEC@0.966703,HSMM@0.062376,HUVEC@0,K562@0.0161585,MCF7@0.193589,NHEK@1.19683,NHLF@0,SKNSHRA@0.190878, 0 0 0 0 ENSG00000251455.1 ENST00000514269.1 chr4:152595635-152599045 3 2562 844 intronic 3.68 1 0,0,0 0 0,0,0 0 0 0 2.24590163934426 3.11492890995261 0 2.26775956284153 3.27132701421801 0 0 0 cat,chimp,dog,horse,human,macaque,marmoset,orangutan,panda, antisense antisense A549@0.0026295,AG04450@0.002514,BJ@0,GM12878@0.280363,H1HESC@0.257908,HELAS3@0.252337,HEPG2@0.30572,HMEC@0.023945,HSMM@0,HUVEC@0,K562@0.003621,MCF7@0.201612,NHEK@0.343709,NHLF@0,SKNSHRA@0.07325, 0 0 0 0 ENSG00000249184.1 ENST00000513617.1 chr4:152720652-152722500 3 761 1083 intergenic 1.89 0 0,0,1 0 0,0,0 0 28.3951985226223 86.777 11.3166885676741 7.15974145891043 113.813 12.0446780551905 13.1689750692521 144.982 0 0 cat,horse,human,marmoset, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0.541305,H1HESC@0.013049,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0.038867,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000249708.1 ENST00000515805.1 chr4:152808695-152812415 3 403 3313 intergenic -12.40 0 0,1,0 0 0,0,0 11.4516129032258 5.35707817687896 0 49.9627791563275 0 35.634 58.1712158808933 1.4470268638696 43.403 0 0 chimp,elephant,guinea_pig,human,macaque,marmoset,pig,rabbit, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000249818.1 ENST00000510416.1 chr4:152826084-152849800 3 576 23136 intergenic -2.98 0 0,0,0 0 0,0,0 0 29.0311203319502 0 0 22.6084457123098 3.824 10.546875 25.6342496542185 5.453 1 1 chimp,human,macaque,marmoset,orangutan, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000248991.1 ENST00000507949.1 chr4:152840620-152865085 4 484 23975 intergenic 0.17 0 0,0,1 0 0,0,0 0 18.6105109489051 23.498 10.8780991735537 18.8683628779979 4.638 14.3305785123967 20.6521376433785 7.593 0 0 chimp,cow,dog,elephant,guinea_pig,horse,human,macaque,marmoset,orangutan, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0.063177,H1HESC@0.015212,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0.00269933,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000251249.1 ENST00000515329.1 chr4:152877143-152890533 2 2650 10738 intergenic -4.56 1 0,0,0 0 0,0,0 49.2747169811321 25.5890296144533 0 54.6547169811321 26.6053268765133 0 46.728679245283 27.4814676848575 0 0 1 chimp,human,marmoset,orangutan, lincRNA lincRNA A549@0,AG04450@0,BJ@0.0058135,GM12878@0.008724,H1HESC@0.0039885,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0.0034675,HUVEC@0,K562@0,MCF7@0,NHEK@0.00155533,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000251249.1 ENST00000513759.1 chr4:152877155-152888742 2 845 10740 intergenic -4.56 0 0,0,0 0 0,0,0 75.6852071005917 25.5842644320298 0 83.4260355029586 26.6003724394786 0 64.3798816568047 27.4763500931099 0 0 0 cat,chimp,dog,horse,human,macaque,marmoset,mouse,orangutan,panda,rabbit,rat, lincRNA lincRNA A549@0,AG04450@0,BJ@0.0058135,GM12878@0.008724,H1HESC@0.0039885,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0.0034675,HUVEC@0,K562@0,MCF7@0,NHEK@0.00155533,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000251249.1 ENST00000504207.1 chr4:152877342-152878650 2 410 896 intergenic 0 0 0,0,1 0 0,0,0 145.00243902439 26.71875 0 40.1853658536585 3.61607142857143 0 51.280487804878 4.73214285714286 0 0 0 cat,chimp,cow,dog,elephant,guinea_pig,horse,human,macaque,marmoset,mouse,orangutan,panda,rat, lincRNA retained_intron A549@0,AG04450@0,BJ@0.0058135,GM12878@0.008724,H1HESC@0.0039885,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0.0034675,HUVEC@0,K562@0,MCF7@0,NHEK@0.00155533,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000245954.2 ENST00000509332.1 chr4:153021906-153025384 3 764 2710 intergenic -0.72 0 0,1,0 0 0,0,0 0 36.8361623616236 0 0 46.6538745387454 0 0 48.2022140221402 0 0 0 cat,chimp,dog,horse,human,macaque,marmoset,orangutan, lincRNA processed_transcript A549@0,AG04450@0.0038595,BJ@0,GM12878@0.009357,H1HESC@0,HELAS3@0.002946,HEPG2@0,HMEC@0.035724,HSMM@0,HUVEC@0.006084,K562@0.001712,MCF7@0.0177915,NHEK@0.363422,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000245954.2 ENST00000504144.1 chr4:153021912-153023087 2 508 665 intergenic -0.72 0 1,1,1 0 0,0,0 0 0 0 0 9.33383458646617 0 0 9.59548872180451 0 1 1 chimp,human,macaque,marmoset,orangutan, lincRNA retained_intron A549@0,AG04450@0.0038595,BJ@0,GM12878@0.009357,H1HESC@0,HELAS3@0.002946,HEPG2@0,HMEC@0.035724,HSMM@0,HUVEC@0.006084,K562@0.001712,MCF7@0.0177915,NHEK@0.363422,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000245954.2 ENST00000499452.2 chr4:153021970-153025872 3 1589 2309 intergenic 3.70 1 1,1,1 0 0,0,0 0 43.2334343871806 0 3.90623033354311 52.067994802945 0 4.0157331655129 53.8098744045041 0 0 0 cat,chimp,dog,guinea_pig,horse,human,macaque,marmoset,orangutan, lincRNA processed_transcript A549@0,AG04450@0.0038595,BJ@0,GM12878@0.009357,H1HESC@0,HELAS3@0.002946,HEPG2@0,HMEC@0.035724,HSMM@0,HUVEC@0.006084,K562@0.001712,MCF7@0.0177915,NHEK@0.363422,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000250706.1 ENST00000504799.1 chr4:153067537-153099725 5 547 31633 intergenic 2.16 0 0,1,0 0 0,0,0 0 36.0504536401859 117.957 0 40.2885910283565 46.8 0 38.5790155849904 47.709 1 1 chimp,human,macaque,marmoset,orangutan, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0.004625,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000251377.1 ENST00000504957.1 chr4:153128573-153147022 3 492 17953 intergenic 3.00 0 0,0,0 0 0,0,0 154.451219512195 13.230546426781 0 74.2520325203252 8.48671531220409 11.298 50.5386178861789 9.40834400935777 11.086 0 0 chimp,horse,human,macaque,marmoset,rabbit, lincRNA lincRNA A549@0.0068135,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000251377.1 ENST00000504785.1 chr4:153143620-153146551 2 446 2483 intergenic 5.46 0 0,0,0 0 0,0,0 0 1.93596455900121 0 0 2.43173580346355 6.606 0 1.65122835279903 6.955 0 0 chimp,elephant,human,macaque,orangutan,pig, lincRNA lincRNA A549@0.0068135,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000248571.1 ENST00000515789.1 chr4:153587520-153591259 2 2369 1368 intronic 14.28 0 0,0,1 0 0,0,0 0 0 0 5.13676656817222 0 0 5.51794005909667 0 0 0 0 chimp,human,orangutan,panda, antisense antisense A549@0,AG04450@0,BJ@0,GM12878@0.019363,H1HESC@0.002455,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0.00194467,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000245623.1 ENST00000501653.1 chr4:153855672-153857989 2 1118 1197 intronic 9.67 0 1,1,1 0 0,0,0 0 9.41520467836257 0 9.80769230769231 22.0810359231412 1.578 8.3211091234347 28.2832080200501 7.626 0 0 cat,chimp,cow,dog,elephant,human,macaque,marmoset,orangutan,panda, lincRNA lincRNA A549@0.0483355,AG04450@0.0217025,BJ@0.0175105,GM12878@0,H1HESC@1.07649,HELAS3@0.0740255,HEPG2@0.0116555,HMEC@0.566667,HSMM@0.0220455,HUVEC@0,K562@0.0811765,MCF7@0.593889,NHEK@0.442139,NHLF@0.010414,SKNSHRA@0.08698, 0 0 0 0 ENSG00000249022.1 ENST00000515232.1 chr4:153955363-154012317 5 557 56389 intergenic -3.30 0 0,0,1 0 0,0,0 0 8.19665182925748 61.986 0 11.5119615527851 36.031 0 13.3823086062885 36.203 1 1 chimp,human,macaque,marmoset,orangutan, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0.005288,HELAS3@0,HEPG2@0.0194145,HMEC@0.029143,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0.002349,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000249309.1 ENST00000505051.1 chr4:154641479-154648874 5 516 6871 intronic -2.84 0 0,1,0 0 0,0,0 0 9.36530344927958 26.1 0 5.35089506622035 44.384 0 14.3871343327027 51.058 0 0 cat,chimp,human,macaque,marmoset,orangutan,pig, antisense antisense A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000249041.1 ENST00000515071.1 chr4:155675908-155703025 4 521 26590 exonic -2.60 0 0,0,0 0 0,0,0 0 0.206844678450545 0 0 2.13065062053404 0 44.3454894433781 6.51632192553592 0 0 0 chimp,cow,elephant,guinea_pig,horse,human,macaque,marmoset,mouse,orangutan,panda,pig,rabbit, antisense antisense A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000250538.1 ENST00000511017.1 chr4:156127681-156129583 3 1565 333 intergenic 2.95 1 0,1,0 0 0,0,0 14.5789137380192 49.1531531531532 0 1.3444089456869 10.7747747747748 0 1.39041533546326 11.0870870870871 2.072 1 1 chimp,human,macaque,marmoset,orangutan, antisense antisense A549@0.066484,AG04450@0,BJ@0,GM12878@0,H1HESC@0.0089705,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0.0270495, 0 0 0 0 ENSG00000250538.1 ENST00000508687.1 chr4:156128318-156130179 3 865 992 exonic 2.95 0 0,0,0 0 0,0,0 26.3768786127168 16.5 0 0 3.61693548387097 0 0 5.81048387096774 0 0 0 cat,chimp,elephant,human,macaque,marmoset,orangutan,pig, antisense antisense A549@0.066484,AG04450@0,BJ@0,GM12878@0,H1HESC@0.0089705,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0.0270495, 0 0 0 0 ENSG00000249924.2 ENST00000513660.2 chr4:156207314-156208288 2 368 604 intergenic 2.99 1 0,0,0 0 0,0,0 0 0 0 0 0 17.88 0 0 30.516 0 1 chimp,human,macaque,orangutan, lincRNA lincRNA A549@0.0083895,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000250910.1 ENST00000512269.1 chr4:156226164-156267711 3 565 40978 exonic 0.85 0 0,0,0 0 0,0,0 0 0.621064961686759 0 0 1.10603250524672 0 2.49557522123894 1.49541217238518 30.426 0 0 cat,chimp,dog,guinea_pig,horse,human,macaque,marmoset,orangutan,rabbit, antisense antisense A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000250910.1 ENST00000508191.1 chr4:156226180-156251462 2 724 24556 intergenic 0 1 0,0,0 0 0,0,0 0 0.389314220557094 0 0 0.665987945919531 0 1.9475138121547 0.798745724059293 30.426 0 0 cat,chimp,dog,elephant,guinea_pig,horse,human,macaque,marmoset,orangutan,panda, antisense antisense A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000223424.1 ENST00000417474.1 chr4:156275368-156281613 3 446 5795 exonic 0.92 1 0,0,0 0 0,0,0 19.0807174887892 22.1584124245039 52.08 169.280269058296 22.6921484037964 45.099 37.7914798206278 24.690595340811 43.973 0 0 chimp,cow,elephant,guinea_pig,horse,human,macaque,marmoset,mouse,orangutan,rabbit, antisense antisense A549@0.0048345,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0.010124, 0 0 0 0 ENSG00000251244.1 ENST00000508265.1 chr4:156436879-156438611 2 517 1213 intergenic -8.17 0 0,0,1 0 0,0,0 0 0 0 0 0 0 9.40038684719536 0 0 0 0 chimp,horse,human,macaque,marmoset,orangutan, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000251511.1 ENST00000510753.1 chr4:157507131-157511191 2 991 3067 intergenic -0.35 1 0,0,0 0 0,0,0 0 0 0 0 0 0 35.832492431887 0 0 0 1 chimp,human, lincRNA lincRNA A549@0.004372,AG04450@0,BJ@0.004874,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0.00393,SKNSHRA@0.0091395, 0 0 0 0 ENSG00000249479.1 ENST00000507972.1 chr4:157563732-157564721 2 173 814 intergenic 0 0 0,0,0 0 0,0,0 0 0 20.832 142.635838150289 3.75921375921376 1.578 60.9190751445087 4.002457002457 9.125 0 0 cat,chimp,cow,dog,elephant,guinea_pig,horse,human,macaque,marmoset,orangutan,panda,pig,rabbit, antisense antisense A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000248912.1 ENST00000512609.1 chr4:157607816-157613788 2 945 5025 intergenic 0.62 0 0,0,0 0 0,0,0 0 0 187.065 0 1.51960199004975 200.234 1.85925925925926 2.17890547263682 201.086 0 0 chimp,elephant,horse,human,marmoset,orangutan, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0.003088,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000248629.1 ENST00000503505.1 chr4:157762511-157763388 2 265 610 intronic 0.93 0 0,0,0 0 0,0,0 0 0 0 0 0 0 0 0 0 0 0 cat,chimp,dog,horse,human,macaque,marmoset,orangutan,panda, antisense antisense A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000250235.1 ENST00000505116.1 chr4:157852970-157854283 2 665 646 intronic -2.54 0 0,0,0 0 0,0,0 0 0 145.062 0 0 46.499 6.94285714285714 0 77.519 0 0 cat,chimp,cow,dog,elephant,horse,human,macaque,marmoset,mouse,orangutan,panda,pig,rat, antisense antisense A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000234111.2 ENST00000507108.1 chr4:158493642-158497306 3 1392 2268 intergenic 2.68 0 0,0,0 0 0,1,0 0 0 0 0 0 0 2.51293103448276 0 0 1 1 chimp,human,macaque,marmoset,orangutan, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0.002199,MCF7@0,NHEK@0,NHLF@0.039859,SKNSHRA@0, 0 0 0 0 ENSG00000234111.2 ENST00000455598.1 chr4:158493688-158496976 2 1115 2171 intergenic 2.68 0 0,0,0 0 0,1,0 0 0 0 0 0 0 0.217937219730942 0 0 0 1 chimp,human,marmoset,orangutan, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0.002199,MCF7@0,NHEK@0,NHLF@0.039859,SKNSHRA@0, 0 0 0 0 ENSG00000234111.2 ENST00000509450.1 chr4:158493688-158496976 3 1016 2268 intergenic 2.68 0 0,0,0 0 0,1,0 0 0 0 0 0 0 0.239173228346457 0 0 0 1 chimp,human,marmoset,orangutan, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0.002199,MCF7@0,NHEK@0,NHLF@0.039859,SKNSHRA@0, 0 0 0 0 ENSG00000249275.1 ENST00000507296.1 chr4:158558839-158588196 2 810 28545 intergenic -5.54 0 0,0,0 0 0,0,0 0 1.24739884393064 0 0 3.00595550884568 0 0 4.54986862848135 0 0 0 chimp,dog,human,macaque,marmoset,mouse,orangutan,pig, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0.00733,K562@0,MCF7@0.007561,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000248429.1 ENST00000509463.1 chr4:159092380-159120603 3 689 27530 exonic 3.60 0 0,1,0 1 0,0,0 143.373004354136 17.5743552488195 217.716 81.1248185776488 9.35484925535779 168.925 103.989840348331 10.1523065746458 172.645 0 0 cat,chimp,cow,elephant,horse,human,macaque,marmoset,mouse,orangutan,panda,rat, processed_transcript processed_transcript A549@0.0509725,AG04450@0.17204,BJ@0.318862,GM12878@0.062052,H1HESC@0.0606595,HELAS3@0.508707,HEPG2@1.78427,HMEC@1.66218,HSMM@3.19317,HUVEC@9.6368,K562@0.0137755,MCF7@2.30655,NHEK@0.04461,NHLF@0.446491,SKNSHRA@0.0423735, 0 0 0 0 ENSG00000248429.1 ENST00000505532.1 chr4:159092525-159122065 5 2222 27310 exonic 3.16 0 1,1,1 1 0,0,0 13.9171917191719 17.7159282314171 273.676 4.15256525652565 9.4302087147565 208.27 5.46309630963096 10.2340900768949 226.592 1 1 chimp,human,macaque,marmoset,orangutan, processed_transcript processed_transcript A549@0.0509725,AG04450@0.17204,BJ@0.318862,GM12878@0.062052,H1HESC@0.0606595,HELAS3@0.508707,HEPG2@1.78427,HMEC@1.66218,HSMM@3.19317,HUVEC@9.6368,K562@0.0137755,MCF7@2.30655,NHEK@0.04461,NHLF@0.446491,SKNSHRA@0.0423735, 0 0 0 0 ENSG00000248429.1 ENST00000514381.1 chr4:159093729-159101078 3 759 6586 exonic 0.81 0 0,1,0 0 0,0,0 73.3570487483531 15.5602793805041 222.769 29.3135704874835 4.47236562405102 114.495 25.9025032938076 4.72623747342849 110.18 0 0 chimp,dog,elephant,guinea_pig,horse,human,macaque,marmoset,orangutan,panda,pig,rabbit,rat, processed_transcript processed_transcript A549@0.0509725,AG04450@0.17204,BJ@0.318862,GM12878@0.062052,H1HESC@0.0606595,HELAS3@0.508707,HEPG2@1.78427,HMEC@1.66218,HSMM@3.19317,HUVEC@9.6368,K562@0.0137755,MCF7@2.30655,NHEK@0.04461,NHLF@0.446491,SKNSHRA@0.0423735, 0 0 0 0 ENSG00000248429.1 ENST00000508752.1 chr4:159097459-159122065 4 2720 21880 intergenic 3.16 0 0,0,1 0 0,0,0 1.38970588235294 9.54378427787934 0 0 4.69008226691042 0 0 5.84277879341865 0 1 1 chimp,human,macaque,marmoset,orangutan, processed_transcript processed_transcript A549@0.0509725,AG04450@0.17204,BJ@0.318862,GM12878@0.062052,H1HESC@0.0606595,HELAS3@0.508707,HEPG2@1.78427,HMEC@1.66218,HSMM@3.19317,HUVEC@9.6368,K562@0.0137755,MCF7@2.30655,NHEK@0.04461,NHLF@0.446491,SKNSHRA@0.0423735, 0 0 0 0 ENSG00000250604.1 ENST00000513067.1 chr4:159120257-159121594 2 363 972 intergenic -1.29 0 0,0,1 0 0,0,0 0 0 0 0 0 0 0 0 0 0 0 cat,chimp,dog,horse,human,macaque,marmoset,orangutan,rabbit, antisense antisense A549@0.030374,AG04450@0.0129045,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@2.08807,MCF7@0.011141,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000249901.1 ENST00000502566.1 chr4:159411918-159431060 3 656 18482 intronic 1.88 0 0,0,1 0 0,0,0 21.0365853658537 0.762958554269018 0 4.8109756097561 0.418136565306785 3.24 4.84756097560976 0.841359160264041 3.336 1 1 chimp,human,macaque,marmoset,orangutan, antisense antisense A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000250180.1 ENST00000502846.1 chr4:160319685-160322398 2 563 2148 intergenic -0.72 0 0,0,0 0 0,0,0 0 0 52.05 0 4.73975791433892 59.554 0 7.95949720670391 70.179 0 0 chimp,cow,dog,elephant,horse,human,macaque,marmoset,orangutan,panda,rabbit, lincRNA lincRNA A549@0,AG04450@0,BJ@0.0801865,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000250488.1 ENST00000513718.1 chr4:160587655-160698936 3 355 110922 intergenic 0.31 0 0,0,0 0 0,0,0 0 9.43232181172356 0 0 7.48706298119399 0 0 8.46718414741891 0 0 0 chimp,cow,dog,horse,human,macaque,marmoset,orangutan, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000249425.1 ENST00000512652.1 chr4:161460406-161507969 5 1412 46143 intergenic 4.09 1 0,0,0 0 0,0,0 0 9.87460719935852 0 0 8.9085885183018 0 0 9.23258132327764 0 0 0 chimp,dog,horse,human,macaque,marmoset,orangutan,panda, lincRNA lincRNA A549@0.017344,AG04450@0,BJ@0,GM12878@0,H1HESC@0.0034925,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0.067088,HUVEC@0,K562@0,MCF7@0.020121,NHEK@0.580852,NHLF@0,SKNSHRA@0.0613525, 0 0 0 0 ENSG00000249568.1 ENST00000508189.1 chr4:162300105-162309569 2 2838 6624 exonic 0.86 0 1,1,1 0 0,0,0 105.007399577167 48.2353562801932 0 69.2212825933756 43.1017512077295 0 94.1046511627907 59.6009963768116 0 0 0 chimp,dog,elephant,guinea_pig,horse,human,macaque,marmoset,opossum,orangutan,panda,pig,rat, antisense antisense A549@0.0034735,AG04450@0,BJ@0,GM12878@2.56943,H1HESC@0,HELAS3@0.39084,HEPG2@0.047063,HMEC@0,HSMM@0,HUVEC@0,K562@0.005094,MCF7@0,NHEK@0.000929667,NHLF@0,SKNSHRA@0.004, 0 0 0 0 ENSG00000249419.1 ENST00000513093.1 chr4:162943885-162968719 6 1099 23725 intronic 0.60 0 0,0,0 0 0,0,0 0 2.46769230769231 0 0 2.02676501580611 0 0 3.81534246575342 0 1 1 chimp,human,macaque,marmoset,orangutan, antisense antisense A549@0,AG04450@0,BJ@0,GM12878@0.0021215,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000248431.1 ENST00000512831.1 chr4:163661820-163663200 2 626 752 intergenic 1.12 0 0,0,0 0 0,0,0 0 0 0 0 0 0 0 0 0 0 1 chimp,human, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0.017374,HMEC@0,HSMM@0,HUVEC@0,K562@0.0923665,MCF7@0.0224825,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000250027.1 ENST00000503478.1 chr4:164029937-164041117 3 774 10402 intronic 0.23 0 0,0,0 0 0,0,0 0 0 0 0 0.206787156316093 0 0 1.72860988271486 0 0 0 cat,chimp,dog,elephant,horse,human,macaque,marmoset,orangutan,panda,pig, antisense antisense A549@0.003555,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0.00535,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000250027.1 ENST00000504628.1 chr4:164038603-164040932 2 432 1895 intronic 0.23 0 0,1,0 0 0,0,0 0 0 0 0 1.13509234828496 0 0 1.19208443271768 0 0 0 cat,chimp,dog,elephant,human,macaque,marmoset,orangutan,panda,pig, antisense antisense A549@0.003555,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0.00535,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000248771.1 ENST00000515485.1 chr4:165675216-165722606 4 710 46674 intergenic 1.17 0 0,0,1 0 0,0,0 27.6197183098592 0.967262287354844 0 152.123943661972 3.60922569310537 6.734 165.716901408451 4.38408964305609 11.558 0 0 chimp,cow,dog,elephant,guinea_pig,horse,human,macaque,marmoset,mouse,orangutan,panda,pig,rabbit, lincRNA lincRNA A549@0.0461525,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0.002949,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000248771.1 ENST00000507311.1 chr4:165675283-165724947 3 3120 46540 intergenic 1.17 0 0,0,0 0 0,0,0 6.28525641025641 0.97004727116459 0 33.2660256410256 3.61961753330468 10.621 36.4214743589744 4.39671250537172 15.246 1 1 chimp,human,macaque,marmoset,orangutan, lincRNA lincRNA A549@0.0461525,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0.002949,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000248329.1 ENST00000507152.1 chr4:165798156-165818675 3 2599 17916 intergenic -2.75 0 0,0,1 0 0,0,0 26.1250480954213 0.822449207412369 100.774 40.2135436706426 3.11297164545657 50.976 47.5302039245864 5.42012726054923 71.307 1 1 chimp,human,macaque,marmoset,orangutan, lincRNA processed_transcript A549@0.0028485,AG04450@0,BJ@0,GM12878@1.80674,H1HESC@18.2487,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0.009026,HUVEC@0.010794,K562@0,MCF7@0.0128805,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000248329.1 ENST00000515275.1 chr4:165798346-165800408 2 549 1511 intergenic -3.47 0 0,1,0 0 0,0,0 94.4644808743169 8.0066181336863 119.449 292.879781420765 2.47253474520185 86.844 131.526411657559 6.88749172733289 112.413 0 0 cat,chimp,cow,dog,elephant,horse,human,macaque,marmoset,opossum,orangutan,panda,platypus,rabbit,rat, lincRNA retained_intron A549@0.0028485,AG04450@0,BJ@0,GM12878@1.80674,H1HESC@18.2487,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0.009026,HUVEC@0.010794,K562@0,MCF7@0.0128805,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000248329.1 ENST00000510062.1 chr4:165798394-165820117 4 670 21047 intergenic 1.22 0 1,1,1 0 0,0,0 52.0402985074627 0.700099776690265 133.513 70.0298507462687 2.96826150995391 101.465 80.1731343283582 5.09051171188293 128.355 0 0 chimp,cow,dog,guinea_pig,human,macaque,marmoset,orangutan,rabbit, lincRNA processed_transcript A549@0.0028485,AG04450@0,BJ@0,GM12878@1.80674,H1HESC@18.2487,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0.009026,HUVEC@0.010794,K562@0,MCF7@0.0128805,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000248329.1 ENST00000505269.1 chr4:165816674-165820086 4 549 2857 intergenic 1.22 0 0,0,1 0 0,0,0 0 0 0 0 2.34546727336367 0 0 3.51172558627931 4.374 1 1 chimp,human,macaque,marmoset,orangutan, lincRNA processed_transcript A549@0.0028485,AG04450@0,BJ@0,GM12878@1.80674,H1HESC@18.2487,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0.009026,HUVEC@0.010794,K562@0,MCF7@0.0128805,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000248329.1 ENST00000515405.1 chr4:165817616-165820117 2 760 1739 intergenic 1.22 0 0,0,1 0 0,0,0 0 0 0 2.61052631578947 0 4.717 2.72631578947368 1.25761932144911 5.774 0 0 chimp,guinea_pig,human,macaque,marmoset,orangutan, lincRNA processed_transcript A549@0.0028485,AG04450@0,BJ@0,GM12878@1.80674,H1HESC@18.2487,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0.009026,HUVEC@0.010794,K562@0,MCF7@0.0128805,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000250887.1 ENST00000503778.1 chr4:165928238-165929111 2 745 126 intergenic 6.27 0 0,1,0 0 0,0,0 0 0 0 0 0 0 0 0 0 0 0 chimp,elephant,human,marmoset,orangutan, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000249500.1 ENST00000507838.1 chr4:166605791-166683930 6 2157 75972 intergenic 5.03 0 0,0,0 0 0,0,0 3.36578581363004 3.50802927394303 0 24.9184051923968 17.9597614910757 53.225 36.1483541956421 18.8938293055336 56.468 0 0 chimp,guinea_pig,human,macaque,marmoset,orangutan, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0.0024555,H1HESC@0.002691,HELAS3@0.008038,HEPG2@0,HMEC@0.574028,HSMM@0,HUVEC@0.0064635,K562@0.0024755,MCF7@0,NHEK@0.110032,NHLF@0,SKNSHRA@0.0486205, 0 0 0 0 ENSG00000249675.1 ENST00000514134.1 chr4:167309853-167447271 4 930 136482 intergenic 3.82 0 0,0,0 0 0,0,0 0 0.816268812004513 0 0 4.55917263815009 0 0 5.53264899400654 0 0 0 chimp,elephant,guinea_pig,human,macaque,orangutan, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000250150.1 ENST00000509096.1 chr4:168228061-168229940 3 586 1289 intergenic 1.41 0 0,0,0 0 0,0,0 0 0 0 0 0 3.585 0 0 3.885 0 0 chimp,elephant,guinea_pig,horse,human,macaque,marmoset,mouse,orangutan, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000248601.1 ENST00000506926.1 chr4:168867825-169034482 4 443 166208 intronic -2.30 0 0,0,0 0 0,0,0 0 0.849387514439738 0 0 2.39961373700423 0 0 4.5565857239122 0 0 0 chimp,human,macaque,marmoset,orangutan,panda, antisense antisense A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000249623.1 ENST00000507842.1 chr4:169569047-169569738 3 445 242 intronic -10.30 0 0,0,0 0 0,0,0 0 0 0 0 0 11.638 6.00674157303371 0 11.958 0 0 chimp,human,macaque,marmoset,orangutan,panda, antisense antisense A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000249609.1 ENST00000508985.1 chr4:169750070-169754088 2 550 3466 intronic -1.21 0 0,0,1 0 0,0,0 0 0 0 0 5.92065781881131 0 0 16.6347374495095 0 0 0 cat,chimp,human,macaque,marmoset,orangutan,panda, antisense antisense A549@0.0078645,AG04450@0.0042665,BJ@0,GM12878@0.0245405,H1HESC@0.011999,HELAS3@0.0226855,HEPG2@0,HMEC@0,HSMM@0.015312,HUVEC@0.038701,K562@0,MCF7@0,NHEK@0.00352933,NHLF@0.017517,SKNSHRA@0.0041175, 0 0 0 0 ENSG00000251445.1 ENST00000506933.1 chr4:169931581-169932090 2 181 326 intergenic 9.95 0 0,1,0 0 0,0,0 0 0 0 0 0 69.059 0 0 63.218 0 0 cat,chimp,horse,human,macaque,marmoset,orangutan, antisense antisense A549@0.050887,AG04450@0,BJ@0,GM12878@0.123373,H1HESC@0.0795165,HELAS3@0.10574,HEPG2@0.0116425,HMEC@0,HSMM@0,HUVEC@0,K562@0.117042,MCF7@0,NHEK@0.01419,NHLF@0.010544,SKNSHRA@0.0248175, 0 0 0 0 ENSG00000251171.1 ENST00000510225.1 chr4:170122945-170141500 5 632 17915 intronic -4.72 0 0,0,1 0 0,0,0 0 0 115.679 0 11.2198157968183 108.047 0 12.2044097125314 113.137 0 0 cat,chimp,elephant,guinea_pig,horse,human,macaque,marmoset,orangutan,panda,rabbit, antisense antisense A549@0,AG04450@0,BJ@0.0168505,GM12878@0,H1HESC@0,HELAS3@0.003547,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0.00305833,NHLF@0,SKNSHRA@0.0043655, 0 0 0 0 ENSG00000248319.1 ENST00000508313.1 chr4:170838912-170897053 5 4360 53773 intergenic 0.64 0 0,0,0 0 0,0,0 0 1.06120171833448 0 1.25137614678899 5.69758057017462 0 2.42912844036697 7.88540717460436 3.18 0 1 chimp,human, lincRNA lincRNA A549@0.00226,AG04450@0,BJ@0,GM12878@0.005404,H1HESC@0.0040005,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000251200.1 ENST00000509956.1 chr4:170867132-170884485 2 447 16904 intergenic 1.21 0 0,0,0 0 0,0,0 0 2.24467581637482 19.12 0 8.80584477046853 17.449 0 9.05584477046853 22.178 0 0 elephant,guinea_pig,human,macaque,orangutan, antisense antisense A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000249955.1 ENST00000508955.1 chr4:170902898-170914957 3 551 11504 exonic 3.31 0 0,0,0 0 0,0,0 0 21.8769123783032 0 28.7785843920145 56.8041550764951 0 29.0780399274047 62.5050417246176 0 0 0 chimp,dog,guinea_pig,human,macaque,marmoset,orangutan,panda,rabbit,rat, antisense antisense A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000250266.1 ENST00000504509.1 chr4:171195070-171204230 3 466 8690 intergenic 3.60 0 0,0,1 0 0,0,0 0 5.25109321058688 0 4.63519313304721 0.371001150747986 0 12.0901287553648 3.27606444188723 0 0 0 cat,chimp,cow,dog,elephant,horse,human,macaque,marmoset,orangutan,panda,rabbit, lincRNA lincRNA A549@0.011779,AG04450@0,BJ@0,GM12878@0.0357845,H1HESC@0.087593,HELAS3@0,HEPG2@0,HMEC@0.122228,HSMM@0,HUVEC@0,K562@0,MCF7@0.0300075,NHEK@0.101539,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000251061.1 ENST00000509548.1 chr4:171264239-171293462 3 427 28792 intergenic -0.75 0 0,0,1 0 0,0,0 0 0 0 0 3.02722978605168 0 0 3.76583773270353 0 0 0 chimp,horse,human,macaque,marmoset,orangutan,rabbit, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0.0138225,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0.0184147,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000250968.1 ENST00000515840.1 chr4:171663620-171664869 2 612 635 intergenic 0.65 0 0,0,0 0 0,0,0 0 0 0 0 0 0 0 0 0 1 1 chimp,human,macaque,marmoset,orangutan, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0.0066975,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000248872.1 ENST00000505329.1 chr4:171961753-171980314 5 1783 16770 intergenic -3.01 1 0,0,0 0 0,0,0 0 0 0 0 0 0 0 0 0 0 1 chimp,human,marmoset,orangutan, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0.007413,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000248872.1 ENST00000503929.1 chr4:171961759-171980314 3 3598 14953 intergenic -2.53 1 0,0,0 0 0,0,0 0 0 0 0 0 0 0 0 0 0 0 chimp,human,macaque,marmoset,orangutan,pig, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0.007413,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000248339.1 ENST00000512241.1 chr4:172210626-172219418 2 4947 3843 intergenic 0.92 0 0,1,1 0 0,0,0 0 0 0 0 0 0 0 0 0 0 1 chimp,human,macaque,orangutan, lincRNA lincRNA A549@0.001363,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0.001124, 0 0 0 0 ENSG00000251176.1 ENST00000399152.2 chr4:172474151-172485418 3 401 10862 intergenic -21.75 0 0,0,1 0 0,0,0 0 5.99337138648499 0 0 3.03581292579635 0 0 4.64242312649604 0 1 1 chimp,human,macaque,marmoset,orangutan, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000249297.1 ENST00000508977.1 chr4:172523834-172559914 5 548 35524 intergenic -3.31 0 0,0,0 0 0,0,0 0 5.74062605562437 0 0 10.3501294899223 4.712 8.22080291970803 11.584703299178 4.921 0 0 chimp,dog,elephant,guinea_pig,horse,human,macaque,marmoset,orangutan, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000245213.2 ENST00000500914.2 chr4:174053079-174090803 7 2029 35683 exonic 5.50 0 0,1,0 0 0,0,0 60.7673730901922 4.13589104055152 0 95.8141941843273 17.6713000588516 6.2 94.0857565303105 19.4261412997786 6.339 1 1 chimp,human,macaque,marmoset,orangutan, lincRNA processed_transcript A549@1.2084,AG04450@0.441538,BJ@0.0705785,GM12878@0.734799,H1HESC@0.501582,HELAS3@0.802835,HEPG2@0.14875,HMEC@0.132191,HSMM@0.18703,HUVEC@0.266089,K562@1.31983,MCF7@0.233906,NHEK@0.114269,NHLF@0.187206,SKNSHRA@0.970133, 0 0 0 0 ENSG00000245213.2 ENST00000499322.2 chr4:174065387-174090306 4 1862 23051 exonic -2.45 0 1,1,1 1 0,0,0 53.031686358754 4.85467007938918 24.552 82.328678839957 13.1910980000868 26.994 80.2239527389903 16.6176738536289 33.157 1 1 chimp,human,macaque,marmoset,orangutan, lincRNA processed_transcript A549@1.2084,AG04450@0.441538,BJ@0.0705785,GM12878@0.734799,H1HESC@0.501582,HELAS3@0.802835,HEPG2@0.14875,HMEC@0.132191,HSMM@0.18703,HUVEC@0.266089,K562@1.31983,MCF7@0.233906,NHEK@0.114269,NHLF@0.187206,SKNSHRA@0.970133, 0 0 0 0 ENSG00000245213.2 ENST00000510523.1 chr4:174087220-174090078 4 589 2263 exonic -2.13 0 0,1,1 0 0,0,0 46.528013582343 38.4445426425099 95.457 88.3938879456706 64.5488289880689 119.688 95.8438030560272 69.0711444984534 117.284 0 1 chimp,human,marmoset,orangutan, lincRNA processed_transcript A549@1.2084,AG04450@0.441538,BJ@0.0705785,GM12878@0.734799,H1HESC@0.501582,HELAS3@0.802835,HEPG2@0.14875,HMEC@0.132191,HSMM@0.18703,HUVEC@0.266089,K562@1.31983,MCF7@0.233906,NHEK@0.114269,NHLF@0.187206,SKNSHRA@0.970133, 0 0 0 0 ENSG00000248774.1 ENST00000507803.1 chr4:174243357-174250845 3 518 6966 exonic 2.41 0 0,0,0 0 0,0,0 168.579150579151 54.614556416882 0 147.243243243243 62.501148435257 0 158.567567567568 67.6366637955785 4.374 0 0 cat,chimp,cow,dog,elephant,guinea_pig,horse,human,macaque,marmoset,opossum,orangutan,panda,rabbit,rat, antisense antisense A549@0.18493,AG04450@0.026467,BJ@0.046571,GM12878@1.10041,H1HESC@0.417221,HELAS3@0.12039,HEPG2@0.287822,HMEC@0.079372,HSMM@0.054749,HUVEC@0.045599,K562@0.748479,MCF7@0.0819115,NHEK@0.0262313,NHLF@0.011152,SKNSHRA@0.062545, 0 0 0 0 ENSG00000237125.3 ENST00000512099.1 chr4:174448421-174504526 4 2134 53965 exonic 0.97 0 0,1,0 0 0,1,0 29.259137769447 41.9688687112017 218.673 51.8950328022493 81.5560641156305 373.155 55.0534208059981 82.9638654683591 389.196 0 0 chimp,cow,horse,human,macaque,marmoset,orangutan,panda,pig, antisense antisense A549@0.0099995,AG04450@0.291226,BJ@1.29493,GM12878@0.0012765,H1HESC@0.003672,HELAS3@0.005214,HEPG2@0,HMEC@0,HSMM@0.0032025,HUVEC@0.028847,K562@0.62738,MCF7@0.0139385,NHEK@0,NHLF@0.019521,SKNSHRA@91.133, 0 0 0 0 ENSG00000237125.3 ENST00000515310.1 chr4:174449751-174459331 4 589 8985 exonic 0 0 0,1,1 0 0,1,0 103.960950764007 96.3125208681135 0 198.891341256367 173.601892042293 9.897 202.723259762309 160.793210907067 13.809 0 0 chimp,cow,dog,elephant,guinea_pig,horse,human,macaque,marmoset,orangutan,panda,pig,rabbit, antisense antisense A549@0.0099995,AG04450@0.291226,BJ@1.29493,GM12878@0.0012765,H1HESC@0.003672,HELAS3@0.005214,HEPG2@0,HMEC@0,HSMM@0.0032025,HUVEC@0.028847,K562@0.62738,MCF7@0.0139385,NHEK@0,NHLF@0.019521,SKNSHRA@91.133, 0 0 0 0 ENSG00000237125.3 ENST00000514673.1 chr4:174451522-174460124 4 1311 7285 intergenic 11.21 0 0,0,1 1 0,1,0 21.8451563691838 63.8778311599176 130.198 132.581235697941 111.547563486616 286.956 145.23646071701 111.651612903226 217.745 0 0 cat,chimp,dog,elephant,horse,human,macaque,orangutan,panda,rabbit, antisense antisense A549@0.0099995,AG04450@0.291226,BJ@1.29493,GM12878@0.0012765,H1HESC@0.003672,HELAS3@0.005214,HEPG2@0,HMEC@0,HSMM@0.0032025,HUVEC@0.028847,K562@0.62738,MCF7@0.0139385,NHEK@0,NHLF@0.019521,SKNSHRA@91.133, 0 0 0 0 ENSG00000237125.3 ENST00000507062.1 chr4:174451522-174463082 4 4269 7285 intergenic 11.21 0 0,0,1 1 0,1,0 29.0510658233778 63.8778311599176 130.198 135.758959943781 111.547563486616 286.956 143.694542047318 111.651612903226 217.745 0 0 chimp,elephant,horse,human,macaque,marmoset,orangutan,rabbit, antisense antisense A549@0.0099995,AG04450@0.291226,BJ@1.29493,GM12878@0.0012765,H1HESC@0.003672,HELAS3@0.005214,HEPG2@0,HMEC@0,HSMM@0.0032025,HUVEC@0.028847,K562@0.62738,MCF7@0.0139385,NHEK@0,NHLF@0.019521,SKNSHRA@91.133, 0 0 0 0 ENSG00000237125.3 ENST00000512929.1 chr4:174451592-174512304 5 566 60138 intergenic -0.94 0 0,0,1 1 0,1,0 35.2314487632509 31.6496557916791 104.971 150.673144876325 65.8771991087167 311.815 147.295053003534 68.1074362300044 230.529 0 0 cat,chimp,cow,dog,guinea_pig,horse,human,macaque,marmoset,mouse,orangutan,pig,rabbit,rat, antisense antisense A549@0.0099995,AG04450@0.291226,BJ@1.29493,GM12878@0.0012765,H1HESC@0.003672,HELAS3@0.005214,HEPG2@0,HMEC@0,HSMM@0.0032025,HUVEC@0.028847,K562@0.62738,MCF7@0.0139385,NHEK@0,NHLF@0.019521,SKNSHRA@91.133, 0 0 0 0 ENSG00000237125.3 ENST00000502334.1 chr4:174451609-174460111 4 1378 7118 intergenic 11.21 0 0,0,1 1 0,1,0 10.5602322206096 65.3765102556898 102.132 96.8033381712627 114.164652992414 320.57 117.264150943396 114.271143579657 238.257 0 0 cat,chimp,dog,elephant,horse,human,macaque,orangutan,panda,rabbit, antisense antisense A549@0.0099995,AG04450@0.291226,BJ@1.29493,GM12878@0.0012765,H1HESC@0.003672,HELAS3@0.005214,HEPG2@0,HMEC@0,HSMM@0.0032025,HUVEC@0.028847,K562@0.62738,MCF7@0.0139385,NHEK@0,NHLF@0.019521,SKNSHRA@91.133, 0 0 0 0 ENSG00000237125.3 ENST00000502941.1 chr4:174451609-174462981 3 355 11013 intergenic 1.96 0 0,0,0 1 0,1,0 37.230985915493 51.0769091074185 102.132 130.16338028169 115.237265050395 320.57 141.588732394366 120.697811677109 238.257 0 0 cat,chimp,cow,elephant,guinea_pig,horse,human,macaque,marmoset,opossum,orangutan,panda,pig,rabbit,rat, antisense antisense A549@0.0099995,AG04450@0.291226,BJ@1.29493,GM12878@0.0012765,H1HESC@0.003672,HELAS3@0.005214,HEPG2@0,HMEC@0,HSMM@0.0032025,HUVEC@0.028847,K562@0.62738,MCF7@0.0139385,NHEK@0,NHLF@0.019521,SKNSHRA@91.133, 0 0 0 0 ENSG00000237125.3 ENST00000507322.1 chr4:174451609-174462981 4 836 10530 intergenic 1.58 0 0,0,0 1 0,1,0 17.4066985645933 53.2507122507122 102.132 79.2344497607656 118.556505223172 320.57 80.8588516746412 124.525071225071 238.257 0 0 chimp,cow,dog,elephant,guinea_pig,horse,human,macaque,marmoset,orangutan,panda,pig, antisense antisense A549@0.0099995,AG04450@0.291226,BJ@1.29493,GM12878@0.0012765,H1HESC@0.003672,HELAS3@0.005214,HEPG2@0,HMEC@0,HSMM@0.0032025,HUVEC@0.028847,K562@0.62738,MCF7@0.0139385,NHEK@0,NHLF@0.019521,SKNSHRA@91.133, 0 0 0 0 ENSG00000237125.3 ENST00000507636.1 chr4:174451609-174462981 4 559 10807 intergenic 1.96 0 0,0,0 1 0,1,0 39.3416815742397 51.2203201628574 102.132 129.871198568873 114.965670398816 320.57 130.463327370304 120.877671879337 238.257 0 0 cat,chimp,cow,dog,elephant,guinea_pig,horse,human,macaque,marmoset,orangutan,panda,pig,rabbit, antisense antisense A549@0.0099995,AG04450@0.291226,BJ@1.29493,GM12878@0.0012765,H1HESC@0.003672,HELAS3@0.005214,HEPG2@0,HMEC@0,HSMM@0.0032025,HUVEC@0.028847,K562@0.62738,MCF7@0.0139385,NHEK@0,NHLF@0.019521,SKNSHRA@91.133, 0 0 0 0 ENSG00000237125.3 ENST00000509640.1 chr4:174451609-174462981 4 669 10697 intergenic -2.50 0 0,0,0 1 0,1,0 21.7518684603886 52.4193699167991 102.132 99.0134529147982 116.705618397682 320.57 101.043348281016 122.581004019819 238.257 0 0 chimp,cow,dog,elephant,guinea_pig,horse,human,macaque,marmoset,orangutan,panda,pig, antisense antisense A549@0.0099995,AG04450@0.291226,BJ@1.29493,GM12878@0.0012765,H1HESC@0.003672,HELAS3@0.005214,HEPG2@0,HMEC@0,HSMM@0.0032025,HUVEC@0.028847,K562@0.62738,MCF7@0.0139385,NHEK@0,NHLF@0.019521,SKNSHRA@91.133, 0 0 0 0 ENSG00000237125.3 ENST00000510221.1 chr4:174451609-174462981 3 558 10810 intergenic -3.67 0 0,0,0 1 0,1,0 23.6863799283154 52.0360777058279 102.132 82.8100358422939 117.401295097132 320.57 90.078853046595 122.964384828862 238.257 0 0 cat,chimp,cow,dog,elephant,guinea_pig,horse,human,macaque,marmoset,orangutan,panda,pig,rat, antisense antisense A549@0.0099995,AG04450@0.291226,BJ@1.29493,GM12878@0.0012765,H1HESC@0.003672,HELAS3@0.005214,HEPG2@0,HMEC@0,HSMM@0.0032025,HUVEC@0.028847,K562@0.62738,MCF7@0.0139385,NHEK@0,NHLF@0.019521,SKNSHRA@91.133, 0 0 0 0 ENSG00000237125.3 ENST00000512246.1 chr4:174451609-174462981 5 878 10486 intergenic -1.86 0 0,0,0 1 0,1,0 16.5740318906606 53.4741560175472 102.132 75.4441913439635 119.053976730879 320.57 76.9908883826879 125.047587259203 238.257 0 0 chimp,cow,dog,elephant,guinea_pig,horse,human,macaque,marmoset,mouse,orangutan,panda,pig,rat, antisense antisense A549@0.0099995,AG04450@0.291226,BJ@1.29493,GM12878@0.0012765,H1HESC@0.003672,HELAS3@0.005214,HEPG2@0,HMEC@0,HSMM@0.0032025,HUVEC@0.028847,K562@0.62738,MCF7@0.0139385,NHEK@0,NHLF@0.019521,SKNSHRA@91.133, 0 0 0 0 ENSG00000237125.3 ENST00000502896.1 chr4:174451609-174463082 3 5275 6194 intergenic 4.05 0 0,0,1 1 0,1,0 20.8401895734597 75.1291572489506 102.132 102.305592417062 131.152889893445 320.57 111.259146919431 130.992250565063 238.257 0 0 chimp,elephant,horse,human,macaque,marmoset,orangutan,rabbit, antisense antisense A549@0.0099995,AG04450@0.291226,BJ@1.29493,GM12878@0.0012765,H1HESC@0.003672,HELAS3@0.005214,HEPG2@0,HMEC@0,HSMM@0.0032025,HUVEC@0.028847,K562@0.62738,MCF7@0.0139385,NHEK@0,NHLF@0.019521,SKNSHRA@91.133, 0 0 0 0 ENSG00000237125.3 ENST00000505621.1 chr4:174451609-174463082 4 863 10604 intergenic -3.67 0 0,0,1 1 0,1,0 25.4831981460023 52.2008675971332 102.132 127.135573580533 117.166540927952 320.57 106.698725376593 123.191720105621 238.257 0 0 chimp,cow,dog,elephant,guinea_pig,horse,human,macaque,marmoset,mouse,orangutan,panda,pig,rabbit, antisense antisense A549@0.0099995,AG04450@0.291226,BJ@1.29493,GM12878@0.0012765,H1HESC@0.003672,HELAS3@0.005214,HEPG2@0,HMEC@0,HSMM@0.0032025,HUVEC@0.028847,K562@0.62738,MCF7@0.0139385,NHEK@0,NHLF@0.019521,SKNSHRA@91.133, 0 0 0 0 ENSG00000237125.3 ENST00000507571.1 chr4:174451609-174463082 4 3192 8275 intergenic -2.92 0 0,0,1 1 0,1,0 36.7706766917293 55.3665256797583 102.132 149.855576441103 105.596737160121 320.57 151.919172932331 110.341148036254 238.257 0 0 chimp,cow,elephant,guinea_pig,horse,human,macaque,marmoset,orangutan,pig,rabbit, antisense antisense A549@0.0099995,AG04450@0.291226,BJ@1.29493,GM12878@0.0012765,H1HESC@0.003672,HELAS3@0.005214,HEPG2@0,HMEC@0,HSMM@0.0032025,HUVEC@0.028847,K562@0.62738,MCF7@0.0139385,NHEK@0,NHLF@0.019521,SKNSHRA@91.133, 0 0 0 0 ENSG00000237125.3 ENST00000508534.1 chr4:174451609-174463082 4 3140 8327 intergenic -2.92 0 0,0,1 1 0,1,0 37.3796178343949 55.0207757896001 102.132 152.337261146497 104.937312357392 320.57 149.41847133758 111.592650414315 238.257 0 0 chimp,cow,elephant,guinea_pig,horse,human,macaque,marmoset,orangutan,pig,rabbit, antisense antisense A549@0.0099995,AG04450@0.291226,BJ@1.29493,GM12878@0.0012765,H1HESC@0.003672,HELAS3@0.005214,HEPG2@0,HMEC@0,HSMM@0.0032025,HUVEC@0.028847,K562@0.62738,MCF7@0.0139385,NHEK@0,NHLF@0.019521,SKNSHRA@91.133, 0 0 0 0 ENSG00000237125.3 ENST00000510339.1 chr4:174451609-174463082 4 3404 8063 intergenic -2.92 0 0,0,1 1 0,1,0 34.4806110458284 56.8222745876225 102.132 140.522620446533 108.373186158998 320.57 144.237367802585 112.54148579933 238.257 0 0 chimp,cow,elephant,guinea_pig,horse,human,macaque,marmoset,orangutan,pig,rabbit, antisense antisense A549@0.0099995,AG04450@0.291226,BJ@1.29493,GM12878@0.0012765,H1HESC@0.003672,HELAS3@0.005214,HEPG2@0,HMEC@0,HSMM@0.0032025,HUVEC@0.028847,K562@0.62738,MCF7@0.0139385,NHEK@0,NHLF@0.019521,SKNSHRA@91.133, 0 0 0 0 ENSG00000237125.3 ENST00000515350.1 chr4:174451609-174463082 4 3269 8198 intergenic -1.06 0 0,0,1 1 0,1,0 35.9045579687978 55.8865576969993 102.132 146.325787702661 106.588558184923 320.57 150.193943101866 110.688216638204 238.257 0 0 chimp,cow,elephant,guinea_pig,horse,human,macaque,marmoset,orangutan,pig,rabbit, antisense antisense A549@0.0099995,AG04450@0.291226,BJ@1.29493,GM12878@0.0012765,H1HESC@0.003672,HELAS3@0.005214,HEPG2@0,HMEC@0,HSMM@0.0032025,HUVEC@0.028847,K562@0.62738,MCF7@0.0139385,NHEK@0,NHLF@0.019521,SKNSHRA@91.133, 0 0 0 0 ENSG00000237125.3 ENST00000503198.1 chr4:174451610-174460625 4 2424 6585 intergenic 4.05 0 0,0,1 1 0,1,0 5.87252475247525 70.668185269552 101.965 65.677805280528 123.405315110099 321.085 89.3333333333334 123.253606681853 238.502 0 0 chimp,horse,human,macaque,marmoset,panda, antisense antisense A549@0.0099995,AG04450@0.291226,BJ@1.29493,GM12878@0.0012765,H1HESC@0.003672,HELAS3@0.005214,HEPG2@0,HMEC@0,HSMM@0.0032025,HUVEC@0.028847,K562@0.62738,MCF7@0.0139385,NHEK@0,NHLF@0.019521,SKNSHRA@91.133, 0 0 0 0 ENSG00000237125.3 ENST00000511196.1 chr4:174451611-174459288 4 553 7118 intergenic 1.58 0 0,0,1 1 0,1,0 25.1681735985533 65.3765102556898 101.798 117.920433996383 114.164652992414 321.6 111.377938517179 114.271143579657 238.747 0 0 cat,chimp,cow,dog,elephant,guinea_pig,horse,human,macaque,marmoset,orangutan,panda,pig,rabbit, antisense antisense A549@0.0099995,AG04450@0.291226,BJ@1.29493,GM12878@0.0012765,H1HESC@0.003672,HELAS3@0.005214,HEPG2@0,HMEC@0,HSMM@0.0032025,HUVEC@0.028847,K562@0.62738,MCF7@0.0139385,NHEK@0,NHLF@0.019521,SKNSHRA@91.133, 0 0 0 0 ENSG00000237125.3 ENST00000515376.1 chr4:174451611-174512475 6 945 59909 intergenic 4.68 0 0,0,0 1 0,1,0 14.7280423280423 31.7706354637867 101.798 69.005291005291 66.2895224423709 321.6 65.1767195767196 68.5565273998898 238.747 0 0 chimp,dog,guinea_pig,horse,human,macaque,marmoset,orangutan,pig,rabbit, antisense antisense A549@0.0099995,AG04450@0.291226,BJ@1.29493,GM12878@0.0012765,H1HESC@0.003672,HELAS3@0.005214,HEPG2@0,HMEC@0,HSMM@0.0032025,HUVEC@0.028847,K562@0.62738,MCF7@0.0139385,NHEK@0,NHLF@0.019521,SKNSHRA@91.133, 0 0 0 0 ENSG00000237125.3 ENST00000505032.1 chr4:174451613-174452489 3 511 361 intergenic 1.58 0 0,0,1 1 0,1,0 133.980430528376 145.656509695291 101.464 284.647749510763 207.529085872576 322.63 262.352250489237 200.686980609418 239.237 0 0 cat,chimp,cow,dog,elephant,guinea_pig,horse,human,macaque,marmoset,opossum,orangutan,panda,pig,rabbit,rat, antisense antisense A549@0.0099995,AG04450@0.291226,BJ@1.29493,GM12878@0.0012765,H1HESC@0.003672,HELAS3@0.005214,HEPG2@0,HMEC@0,HSMM@0.0032025,HUVEC@0.028847,K562@0.62738,MCF7@0.0139385,NHEK@0,NHLF@0.019521,SKNSHRA@91.133, 0 0 0 0 ENSG00000237125.3 ENST00000515741.1 chr4:174451613-174458446 3 802 6027 intergenic 1.58 0 0,0,0 1 0,1,0 16.5635910224439 77.2108843537415 101.464 80.6807980049875 134.786958685913 322.63 76.1546134663342 134.621868259499 239.237 0 0 cat,chimp,cow,dog,elephant,guinea_pig,horse,human,macaque,marmoset,orangutan,panda,pig,rabbit,rat, antisense antisense A549@0.0099995,AG04450@0.291226,BJ@1.29493,GM12878@0.0012765,H1HESC@0.003672,HELAS3@0.005214,HEPG2@0,HMEC@0,HSMM@0.0032025,HUVEC@0.028847,K562@0.62738,MCF7@0.0139385,NHEK@0,NHLF@0.019521,SKNSHRA@91.133, 0 0 0 0 ENSG00000237125.3 ENST00000511728.1 chr4:174451613-174458616 4 579 6418 intergenic 1.58 0 0,0,1 1 0,1,0 22.9430051813472 72.5070115300717 101.464 110.846286701209 126.61639139919 322.63 107.625215889465 126.460735431599 239.237 0 0 cat,chimp,cow,dog,elephant,guinea_pig,horse,human,macaque,marmoset,orangutan,panda,pig,rabbit,rat, antisense antisense A549@0.0099995,AG04450@0.291226,BJ@1.29493,GM12878@0.0012765,H1HESC@0.003672,HELAS3@0.005214,HEPG2@0,HMEC@0,HSMM@0.0032025,HUVEC@0.028847,K562@0.62738,MCF7@0.0139385,NHEK@0,NHLF@0.019521,SKNSHRA@91.133, 0 0 0 0 ENSG00000237125.3 ENST00000509866.1 chr4:174451613-174458842 4 638 6585 intergenic -2.20 0 0,0,0 1 0,1,0 20.8213166144201 70.668185269552 101.464 100.595611285266 123.405315110099 322.63 97.6724137931034 123.253606681853 239.237 0 0 cat,chimp,cow,dog,elephant,horse,human,macaque,marmoset,mouse,orangutan,panda,pig, antisense antisense A549@0.0099995,AG04450@0.291226,BJ@1.29493,GM12878@0.0012765,H1HESC@0.003672,HELAS3@0.005214,HEPG2@0,HMEC@0,HSMM@0.0032025,HUVEC@0.028847,K562@0.62738,MCF7@0.0139385,NHEK@0,NHLF@0.019521,SKNSHRA@91.133, 0 0 0 0 ENSG00000237125.3 ENST00000512943.1 chr4:174451614-174505820 5 515 53683 intergenic 0.74 0 0,0,0 1 0,1,0 25.178640776699 33.6137510943874 101.297 127.803883495146 66.5924035541978 323.145 120.790291262136 70.0299722444722 239.482 0 0 cat,chimp,dog,guinea_pig,horse,human,macaque,marmoset,orangutan,panda,pig,rabbit,rat, antisense antisense A549@0.0099995,AG04450@0.291226,BJ@1.29493,GM12878@0.0012765,H1HESC@0.003672,HELAS3@0.005214,HEPG2@0,HMEC@0,HSMM@0.0032025,HUVEC@0.028847,K562@0.62738,MCF7@0.0139385,NHEK@0,NHLF@0.019521,SKNSHRA@91.133, 0 0 0 0 ENSG00000237125.3 ENST00000503474.1 chr4:174451614-174506879 5 1574 53683 intergenic 0.74 0 0,0,0 1 0,1,0 8.23824650571792 33.6137510943874 101.297 51.633418043202 66.5924035541978 323.145 48.7013977128335 70.0299722444722 239.482 1 1 chimp,human,macaque,marmoset,orangutan, antisense antisense A549@0.0099995,AG04450@0.291226,BJ@1.29493,GM12878@0.0012765,H1HESC@0.003672,HELAS3@0.005214,HEPG2@0,HMEC@0,HSMM@0.0032025,HUVEC@0.028847,K562@0.62738,MCF7@0.0139385,NHEK@0,NHLF@0.019521,SKNSHRA@91.133, 0 0 0 0 ENSG00000237125.3 ENST00000515345.1 chr4:174451625-174458566 4 793 6142 intergenic -3.96 0 0,0,1 1 0,1,0 11.9546027742749 75.7652230543797 99.46 73.8032786885246 132.26326929339 326.94 71.4110970996217 132.101269944643 242.177 0 0 cat,chimp,cow,dog,guinea_pig,horse,human,macaque,marmoset,orangutan,panda,pig,rabbit,rat, antisense antisense A549@0.0099995,AG04450@0.291226,BJ@1.29493,GM12878@0.0012765,H1HESC@0.003672,HELAS3@0.005214,HEPG2@0,HMEC@0,HSMM@0.0032025,HUVEC@0.028847,K562@0.62738,MCF7@0.0139385,NHEK@0,NHLF@0.019521,SKNSHRA@91.133, 0 0 0 0 ENSG00000237125.3 ENST00000503309.1 chr4:174451626-174455228 3 506 3092 intergenic 1.58 0 0,0,0 1 0,1,0 18.1086956521739 34.9957956015524 99.293 92.6798418972332 90.77425614489 327.081 88.5395256916996 93.5876455368693 242.422 0 0 chimp,cow,dog,guinea_pig,horse,human,macaque,marmoset,orangutan,panda,pig,rabbit,rat, antisense antisense A549@0.0099995,AG04450@0.291226,BJ@1.29493,GM12878@0.0012765,H1HESC@0.003672,HELAS3@0.005214,HEPG2@0,HMEC@0,HSMM@0.0032025,HUVEC@0.028847,K562@0.62738,MCF7@0.0139385,NHEK@0,NHLF@0.019521,SKNSHRA@91.133, 0 0 0 0 ENSG00000237125.3 ENST00000512209.1 chr4:174451626-174505787 4 348 53807 intergenic 0 0 0,0,0 1 0,1,0 26.3304597701149 33.5362871001914 99.293 134.758620689655 66.6481870388611 327.081 128.738505747126 70.0485252848143 242.422 0 0 chimp,cow,dog,elephant,guinea_pig,horse,human,macaque,marmoset,orangutan,panda,pig, antisense antisense A549@0.0099995,AG04450@0.291226,BJ@1.29493,GM12878@0.0012765,H1HESC@0.003672,HELAS3@0.005214,HEPG2@0,HMEC@0,HSMM@0.0032025,HUVEC@0.028847,K562@0.62738,MCF7@0.0139385,NHEK@0,NHLF@0.019521,SKNSHRA@91.133, 0 0 0 0 ENSG00000237125.3 ENST00000504740.1 chr4:174451630-174504247 4 833 51778 intergenic 1.58 0 0,0,0 1 0,1,0 9.47779111644658 34.8504577233574 98.625 78.8847539015606 68.6664220325235 327.645 76.4981992797119 72.1634864228051 243.402 0 0 cat,chimp,cow,dog,guinea_pig,horse,human,macaque,marmoset,orangutan,panda,pig,rabbit, antisense antisense A549@0.0099995,AG04450@0.291226,BJ@1.29493,GM12878@0.0012765,H1HESC@0.003672,HELAS3@0.005214,HEPG2@0,HMEC@0,HSMM@0.0032025,HUVEC@0.028847,K562@0.62738,MCF7@0.0139385,NHEK@0,NHLF@0.019521,SKNSHRA@91.133, 0 0 0 0 ENSG00000237125.3 ENST00000508887.1 chr4:174451635-174458591 4 967 5983 intergenic -1.86 0 0,0,1 1 0,1,0 6.5253360910031 77.7787063346148 97.79 55.1975180972079 135.778204913923 328.35 53.2150982419855 135.611900384423 244.627 0 0 chimp,cow,dog,elephant,guinea_pig,horse,human,macaque,marmoset,mouse,orangutan,panda,pig,rabbit,rat, antisense antisense A549@0.0099995,AG04450@0.291226,BJ@1.29493,GM12878@0.0012765,H1HESC@0.003672,HELAS3@0.005214,HEPG2@0,HMEC@0,HSMM@0.0032025,HUVEC@0.028847,K562@0.62738,MCF7@0.0139385,NHEK@0,NHLF@0.019521,SKNSHRA@91.133, 0 0 0 0 ENSG00000237125.3 ENST00000505817.1 chr4:174451658-174504165 3 452 52051 intergenic 0 0 0,0,1 1 0,1,0 6.24557522123894 34.667672090834 99.658 72.070796460177 68.7073255076752 329.556 67.1637168141593 72.1882576703618 251.807 0 0 chimp,cow,dog,elephant,guinea_pig,horse,human,macaque,marmoset,orangutan,pig,rabbit, antisense antisense A549@0.0099995,AG04450@0.291226,BJ@1.29493,GM12878@0.0012765,H1HESC@0.003672,HELAS3@0.005214,HEPG2@0,HMEC@0,HSMM@0.0032025,HUVEC@0.028847,K562@0.62738,MCF7@0.0139385,NHEK@0,NHLF@0.019521,SKNSHRA@91.133, 0 0 0 0 ENSG00000237125.3 ENST00000514431.1 chr4:174451666-174504320 4 888 51760 intergenic 1.58 0 0,0,0 1 0,1,0 3.17905405405405 34.8625772797527 99.658 45.0777027027027 68.8760819165379 329.7 40.6959459459459 72.4070517774343 255.063 0 0 chimp,dog,guinea_pig,horse,human,macaque,marmoset,orangutan,panda,pig,rabbit, antisense antisense A549@0.0099995,AG04450@0.291226,BJ@1.29493,GM12878@0.0012765,H1HESC@0.003672,HELAS3@0.005214,HEPG2@0,HMEC@0,HSMM@0.0032025,HUVEC@0.028847,K562@0.62738,MCF7@0.0139385,NHEK@0,NHLF@0.019521,SKNSHRA@91.133, 0 0 0 0 ENSG00000237125.3 ENST00000510268.1 chr4:174452326-174512406 4 631 59443 intergenic 4.68 0 0,0,0 0 0,1,0 92.3851030110935 30.1993506384267 114.223 166.679873217116 64.0202546977777 285.132 149.277337559429 66.5037599044463 252.818 0 0 cat,chimp,dog,guinea_pig,horse,human,macaque,marmoset,orangutan,pig,rabbit, antisense antisense A549@0.0099995,AG04450@0.291226,BJ@1.29493,GM12878@0.0012765,H1HESC@0.003672,HELAS3@0.005214,HEPG2@0,HMEC@0,HSMM@0.0032025,HUVEC@0.028847,K562@0.62738,MCF7@0.0139385,NHEK@0,NHLF@0.019521,SKNSHRA@91.133, 0 0 0 0 ENSG00000237125.3 ENST00000504429.1 chr4:174452696-174458510 2 747 5065 intergenic -3.96 0 0,0,0 0 0,1,0 0 70.5119447186574 108.995 14.8795180722892 126.679170779862 189.871 12.7898259705489 129.212438302073 173.273 0 0 cat,chimp,cow,elephant,horse,human,macaque,marmoset,orangutan,panda, antisense antisense A549@0.0099995,AG04450@0.291226,BJ@1.29493,GM12878@0.0012765,H1HESC@0.003672,HELAS3@0.005214,HEPG2@0,HMEC@0,HSMM@0.0032025,HUVEC@0.028847,K562@0.62738,MCF7@0.0139385,NHEK@0,NHLF@0.019521,SKNSHRA@91.133, 0 0 0 0 ENSG00000250043.1 ENST00000515825.1 chr4:174798622-174834403 3 545 35232 intergenic 3.80 0 0,0,1 0 0,0,0 75.7669724770642 21.0047967756585 0 169.310091743119 37.4931028610354 0 194.777981651376 40.9763567211626 0 0 0 cat,chimp,cow,dog,guinea_pig,horse,human,macaque,marmoset,mouse,orangutan,panda,pig,rabbit,rat, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0.0896305, 0 0 0 0 ENSG00000250043.1 ENST00000502956.1 chr4:174817545-174833046 4 773 14722 intergenic -1.41 0 0,0,0 0 0,0,0 0 18.5006113299823 12.4 0 42.1104469501426 30.273 0 46.0341665534574 39.606 0 0 chimp,dog,human,macaque,orangutan,panda,rabbit, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0.0896305, 0 0 0 0 ENSG00000250708.1 ENST00000509968.1 chr4:174818403-174850582 4 507 31666 intergenic 5.59 1 0,0,1 0 0,0,0 0 22.3465546643087 0 0 44.8861870776227 4.41 0 48.2550685277585 4.566 0 0 chimp,horse,human,macaque,marmoset,orangutan, lincRNA lincRNA A549@0.11177,AG04450@0,BJ@0.0129705,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0.004922,MCF7@0.0322325,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000250708.1 ENST00000512263.1 chr4:174818424-174850676 3 496 31752 intergenic 5.59 1 0,0,1 0 0,0,0 0 22.2860292265054 0 0 44.7646132527085 4.41 0 48.1243701184177 4.566 0 0 chimp,elephant,horse,human,macaque,marmoset,orangutan, lincRNA lincRNA A549@0.11177,AG04450@0,BJ@0.0129705,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0.004922,MCF7@0.0322325,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000251216.1 ENST00000511291.1 chr4:174845358-174912002 3 1821 64819 intergenic 1.64 0 0,0,0 0 0,0,0 40.9423393739703 10.582082414107 166.32 80.9176276771005 25.2549715361237 230.494 103.233388248215 26.8624631666641 185.213 0 0 chimp,elephant,horse,human,macaque,orangutan,pig,rabbit,rat, lincRNA lincRNA A549@0,AG04450@0.001768,BJ@0,GM12878@0,H1HESC@0,HELAS3@0.0012815,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@2.02091, 0 0 0 0 ENSG00000251216.1 ENST00000503325.1 chr4:174903770-174912012 3 311 7927 intergenic 0.46 0 0,0,0 0 0,0,0 41.7524115755627 14.0406206635549 163.67 93.7202572347267 28.3351835498928 229.39 86.7073954983923 28.9564778604768 186.265 0 0 chimp,horse,human,macaque,marmoset,orangutan, lincRNA lincRNA A549@0,AG04450@0.001768,BJ@0,GM12878@0,H1HESC@0,HELAS3@0.0012815,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@2.02091, 0 0 0 0 ENSG00000248174.1 ENST00000515444.1 chr4:175015811-175141549 5 1323 124407 intergenic -1.42 0 0,1,0 0 0,0,0 0 19.23980161888 0 5.4973544973545 32.3276986021687 18.346 15.4542705971277 35.1387622882957 22.395 0 0 cat,chimp,human,macaque,marmoset,orangutan, lincRNA processed_transcript A549@0.021284,AG04450@0,BJ@0.004131,GM12878@0,H1HESC@0,HELAS3@0.0223645,HEPG2@0,HMEC@0,HSMM@0.003266,HUVEC@0,K562@0,MCF7@0.003028,NHEK@0,NHLF@0.0032375,SKNSHRA@1.86176, 0 0 0 0 ENSG00000248174.1 ENST00000503140.1 chr4:175018906-175041668 4 592 22164 intergenic -4.02 0 0,0,0 0 0,0,0 0 21.8888738494857 0 0 35.7929074174337 5.057 2.05236486486486 39.3415448475005 4.979 0 0 cat,chimp,cow,elephant,guinea_pig,horse,human,macaque,marmoset,orangutan,pig, lincRNA processed_transcript A549@0.021284,AG04450@0,BJ@0.004131,GM12878@0,H1HESC@0,HELAS3@0.0223645,HEPG2@0,HMEC@0,HSMM@0.003266,HUVEC@0,K562@0,MCF7@0.003028,NHEK@0,NHLF@0.0032375,SKNSHRA@1.86176, 0 0 0 0 ENSG00000250957.1 ENST00000511346.1 chr4:175056206-175075788 2 1142 18438 intergenic -2.89 0 0,0,0 0 0,0,0 41.0858143607706 38.1383013342011 0 103.687390542907 52.4790649745092 4.803 80.5700525394045 54.622193296453 9.821 0 0 cat,chimp,cow,dog,elephant,guinea_pig,horse,human,macaque,marmoset,mouse,opossum,orangutan,panda,pig,platypus,rabbit,rat, lincRNA lincRNA A549@0.001295,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0.00903,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0.0040595,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0.115668, 0 0 0 0 ENSG00000251213.1 ENST00000504167.1 chr4:175085592-175090064 3 332 4136 intergenic -10.44 0 0,0,0 0 0,0,0 0 8.89603481624758 0 61.4367469879518 22.3815280464217 0 66.0030120481928 32.7178433268859 0 0 0 cat,chimp,cow,dog,guinea_pig,horse,human,macaque,marmoset,mouse,orangutan,panda,pig,rabbit,rat, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0.10014, 0 0 0 0 ENSG00000249875.1 ENST00000508815.1 chr4:175276005-175297596 3 363 21224 intergenic -0.28 0 0,0,0 0 0,0,0 0 0 0 0 0.647238974745571 0 0 0.917593290614399 0 1 1 chimp,human,macaque,marmoset,orangutan, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000250596.1 ENST00000515178.1 chr4:175444852-175461495 3 2199 14440 intergenic 0.30 0 0,0,0 0 0,0,0 0 1.35387811634349 0 0 2.02486149584488 0 23.0468394724875 5.69210526315789 0 0 1 chimp,human,macaque,orangutan, processed_transcript processed_transcript A549@0.0046355,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000251584.1 ENST00000507483.1 chr4:175457791-175461935 3 789 3351 intergenic -3.47 0 0,0,0 0 0,0,0 0 5.83407937928976 0 0 0 0 0 16.1408534765742 46.527 0 0 chimp,horse,human,macaque,marmoset,orangutan, lincRNA lincRNA A549@0.150107,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0.0241315,MCF7@0.005192,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000250431.1 ENST00000507525.1 chr4:175898722-175900532 3 230 1576 exonic -7.15 0 0,0,0 0 0,0,0 0 0 0 0 0 0 0 10.9663705583756 0 1 1 chimp,human,macaque,marmoset,orangutan, antisense antisense A549@0,AG04450@0.019239,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000248551.1 ENST00000502661.1 chr4:176267509-176324261 3 902 55846 intergenic -1.57 0 0,0,0 0 0,0,0 0 0.216667263546181 0 0 1.12366149769008 0 0 5.0167066575941 0 1 1 chimp,human,macaque,marmoset,orangutan, lincRNA lincRNA A549@0,AG04450@0.141104,BJ@0.059163,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0.0378815,HUVEC@0,K562@0,MCF7@0.076877,NHEK@0,NHLF@0.0127925,SKNSHRA@0, 0 0 0 0 ENSG00000249945.1 ENST00000506984.1 chr4:176379440-176387848 3 487 7917 intergenic 3.92 0 0,1,0 0 0,0,0 0 0 0 0 0 0 0 0 0 0 0 human, lincRNA lincRNA A549@0.0088595,AG04450@0,BJ@0,GM12878@0,H1HESC@0.011879,HELAS3@0.00477,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000249106.1 ENST00000514864.1 chr4:176711458-176733340 8 1205 20663 intronic 3.76 0 0,0,1 0 0,0,0 119.748547717842 2.26777331462034 54.05 126.353526970954 3.76044136862992 84.678 127.763485477178 4.57837680878866 93.715 0 0 cat,chimp,cow,elephant,horse,human,macaque,marmoset,opossum,orangutan, antisense antisense A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000248980.1 ENST00000512634.1 chr4:177229419-177241609 3 607 11579 exonic 10.55 0 0,1,0 1 0,0,0 0 0 28.09 84.004942339374 6.19112185853701 9.936 94.8896210873147 6.88720960359271 10.66 0 0 chimp,human,macaque,marmoset,orangutan,pig,rabbit, antisense antisense A549@0.0267905,AG04450@0.157049,BJ@0.189288,GM12878@0.0733215,H1HESC@0.116092,HELAS3@0.184385,HEPG2@0.191304,HMEC@0.127538,HSMM@0.180565,HUVEC@0.674207,K562@0.106515,MCF7@0.0415405,NHEK@0.030345,NHLF@0.092737,SKNSHRA@0.168695, 0 0 0 0 ENSG00000248388.1 ENST00000504017.1 chr4:177590772-177627223 3 304 36143 intronic -5.18 0 0,0,0 0 0,0,0 0 6.41294303184572 0 0 10.3262319121268 1.912 0 12.3498049414824 4.518 0 0 chimp,dog,elephant,horse,human,macaque,orangutan, antisense antisense A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000248388.1 ENST00000509194.1 chr4:177590772-177627299 2 330 36195 intronic -3.55 0 0,0,0 0 0,0,0 0 6.40372979693328 0 0 10.3113966017406 1.912 0 12.3320624395635 4.518 0 0 chimp,dog,elephant,horse,human,macaque,orangutan, antisense antisense A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000249458.1 ENST00000510203.1 chr4:177787768-177796611 3 425 8414 intergenic 0.88 1 0,0,0 0 0,0,0 15.8564705882353 5.3279058711671 0 6.74823529411765 5.33170905633468 0 24.8329411764706 5.11433325410031 0 0 0 chimp,cow,dog,horse,human,macaque,orangutan,pig, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0.0234383,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000250263.1 ENST00000508790.1 chr4:177796856-177801759 2 689 4212 intergenic 0 0 0,0,0 0 0,0,0 0 0 51.861 5.55007256894049 5.93186134852801 28.333 5.64296081277213 6.12891737891738 29.554 0 0 cat,chimp,human,macaque,marmoset,orangutan,rabbit, lincRNA lincRNA A549@0,AG04450@0,BJ@0.056926,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0.0974615,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0.0028235,SKNSHRA@0.156618, 0 0 0 0 ENSG00000249084.1 ENST00000506895.1 chr4:178264158-178278186 2 751 13275 intronic 3.45 0 0,0,0 0 0,0,0 0 35.2580037664783 0 0 50.8442937853107 8.79 0 45.8512241054614 9.33 0 0 chimp,horse,human,macaque,marmoset,orangutan,panda,pig,rabbit, antisense antisense A549@0,AG04450@0.0085645,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000250131.1 ENST00000507023.1 chr4:178366133-178598280 6 2155 229982 intergenic 4.52 0 0,0,0 1 0,0,0 38.7415313225058 14.8450183057805 0 64.491879350348 19.0870024610622 0 72.8510440835267 20.3623848822951 0 0 0 cat,chimp,guinea_pig,human,macaque,marmoset,mouse,orangutan,pig,rabbit,rat, antisense antisense A549@0.049791,AG04450@0.413725,BJ@0.203652,GM12878@0.078416,H1HESC@0.424818,HELAS3@0.0368965,HEPG2@0.0210195,HMEC@0.011369,HSMM@0.051036,HUVEC@0.015524,K562@0.0291545,MCF7@0.10416,NHEK@0.030892,NHLF@0.093201,SKNSHRA@0.0472045, 0 0 0 0 ENSG00000251416.1 ENST00000503093.1 chr4:178607827-178612222 2 253 4140 intergenic 0 1 0,0,0 0 0,0,0 0 51.7514492753623 0 0 60.0847826086956 0 0 57.5751207729469 0 1 1 chimp,human,macaque,marmoset,orangutan, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000251504.1 ENST00000507011.1 chr4:178650792-178829016 5 507 177709 intronic -1.36 0 0,1,0 0 0,0,0 0 7.54562796481889 0 0 9.77967913836665 6.184 6.84023668639053 12.3273553956187 6.472 1 1 chimp,human,macaque,marmoset,orangutan, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0.010947,HELAS3@0,HEPG2@0.003865,HMEC@0,HSMM@0,HUVEC@0.003523,K562@0.0091895,MCF7@0.0026525,NHEK@0,NHLF@0.0127275,SKNSHRA@0, 0 0 0 0 ENSG00000251504.1 ENST00000512527.1 chr4:178733770-178829032 2 576 94684 intronic -1.36 0 0,1,0 0 0,0,0 0 4.50544970639179 0 0 6.48824511005027 6.184 0 7.55426471209497 6.472 1 1 chimp,human,macaque,marmoset,orangutan, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0.010947,HELAS3@0,HEPG2@0.003865,HMEC@0,HSMM@0,HUVEC@0.003523,K562@0.0091895,MCF7@0.0026525,NHEK@0,NHLF@0.0127275,SKNSHRA@0, 0 0 0 0 ENSG00000251504.1 ENST00000514736.1 chr4:178824538-178829090 2 756 3794 intronic -1.36 0 0,1,1 0 0,0,0 0 0 0 0 25.2053241960991 6.184 0 26.3610964681075 6.472 1 1 chimp,human,macaque,marmoset,orangutan, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0.010947,HELAS3@0,HEPG2@0.003865,HMEC@0,HSMM@0,HUVEC@0.003523,K562@0.0091895,MCF7@0.0026525,NHEK@0,NHLF@0.0127275,SKNSHRA@0, 0 0 0 0 ENSG00000250993.1 ENST00000512036.1 chr4:180310288-180386459 3 536 75631 intergenic -2.80 0 0,0,1 0 0,0,0 0 8.43963454139176 0 0 11.0206264626939 0 0 13.4273644405072 0 0 0 NA lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0.021744,H1HESC@0.20294,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000249883.1 ENST00000506917.1 chr4:181652317-181680191 4 525 27343 intergenic -3.06 1 0,0,0 0 0,0,0 0 9.43941776688732 0 0 8.06177083714296 0 0 10.6788574772337 0 0 0 chimp,dog,guinea_pig,human,macaque,marmoset,orangutan, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000248197.1 ENST00000512487.1 chr4:181985242-182080302 3 590 94466 intergenic -2.21 1 0,0,0 0 0,0,0 49.2203389830508 31.2982872144475 25.65 24.3101694915254 42.4093112866005 26.531 21.8491525423729 41.9169542480892 32.692 0 0 chimp,cow,elephant,guinea_pig,horse,human,macaque,marmoset,orangutan,rabbit, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000249460.1 ENST00000512547.1 chr4:182182314-182186182 2 491 3375 intergenic -0.95 0 0,1,0 0 0,0,0 125.026476578411 30.128 18.575 101.745417515275 32.7611851851852 5.844 91.8553971486762 35.4314074074074 5.996 0 0 cat,chimp,cow,dog,elephant,guinea_pig,horse,human,macaque,marmoset,orangutan,panda,pig,rat, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000251336.1 ENST00000510211.1 chr4:182741172-182751126 3 398 9552 intergenic 1.00 0 0,0,0 0 0,0,0 0 49.373324958124 0 0 62.9829355108878 0 0 63.5433417085427 0 0 0 chimp,cow,dog,elephant,horse,human,macaque,marmoset,orangutan,panda,pig, lincRNA lincRNA A549@0,AG04450@0.028514,BJ@0,GM12878@0.010054,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0.005131,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000177822.3 ENST00000509012.1 chr4:182795591-183065348 5 559 269190 intergenic -1.48 0 0,1,0 1 0,1,0 133.703041144902 41.1212117834986 55.55 105.284436493739 51.1300977005089 145.32 104.810375670841 52.4116757680449 100.484 0 0 cat,chimp,guinea_pig,horse,human,macaque,marmoset,mouse,opossum,orangutan,panda,pig,rabbit, lincRNA processed_transcript A549@0.160283,AG04450@1.74671,BJ@0.472558,GM12878@0,H1HESC@3.4985,HELAS3@0.375511,HEPG2@0.13143,HMEC@3.63636,HSMM@2.45076,HUVEC@0,K562@0,MCF7@0,NHEK@1.41753,NHLF@0.241078,SKNSHRA@0.987815, 0 0 0 0 ENSG00000177822.3 ENST00000507869.1 chr4:182896309-183006289 5 2124 107848 intergenic 1.69 0 0,0,0 0 0,0,0 44.2457627118644 33.4851550330094 316.188 10.5758003766478 42.9877976411245 291.763 8.39971751412429 44.8224167346636 306.663 1 1 chimp,human,macaque,marmoset,orangutan, lincRNA processed_transcript A549@0.160283,AG04450@1.74671,BJ@0.472558,GM12878@0,H1HESC@3.4985,HELAS3@0.375511,HEPG2@0.13143,HMEC@3.63636,HSMM@2.45076,HUVEC@0,K562@0,MCF7@0,NHEK@1.41753,NHLF@0.241078,SKNSHRA@0.987815, 0 0 0 0 ENSG00000177822.3 ENST00000505537.1 chr4:183000782-183006237 3 547 4904 intergenic -0.40 0 0,0,1 0 0,0,0 116.954296160878 104.336052202284 346.192 107.195612431444 242.364396411093 296.728 108.091407678245 226.957993474715 308.854 0 0 cat,chimp,dog,guinea_pig,horse,human,macaque,marmoset,orangutan,rabbit, lincRNA processed_transcript A549@0.160283,AG04450@1.74671,BJ@0.472558,GM12878@0,H1HESC@3.4985,HELAS3@0.375511,HEPG2@0.13143,HMEC@3.63636,HSMM@2.45076,HUVEC@0,K562@0,MCF7@0,NHEK@1.41753,NHLF@0.241078,SKNSHRA@0.987815, 0 0 0 0 ENSG00000177822.3 ENST00000513752.1 chr4:183062339-183065653 5 800 2506 intergenic 2.91 0 0,1,1 0 0,1,0 239.5725 97.9349561053472 0 297.86625 88.0199521149242 86.034 319.3575 81.5335195530726 39.95 0 0 cat,chimp,cow,dog,elephant,guinea_pig,horse,human,macaque,marmoset,mouse,opossum,orangutan,panda,pig,rabbit,rat, lincRNA processed_transcript A549@0.160283,AG04450@1.74671,BJ@0.472558,GM12878@0,H1HESC@3.4985,HELAS3@0.375511,HEPG2@0.13143,HMEC@3.63636,HSMM@2.45076,HUVEC@0,K562@0,MCF7@0,NHEK@1.41753,NHLF@0.241078,SKNSHRA@0.987815, 0 0 0 0 ENSG00000177822.3 ENST00000315302.2 chr4:183062803-183065619 4 2256 554 intergenic 12.49 0 1,1,1 0 0,1,0 79.8847517730496 413.853790613718 0 96.4233156028369 364.15523465704 103.544 106.376773049645 324.157039711191 56.882 0 0 chimp,cow,dog,guinea_pig,human,macaque,marmoset,mouse,orangutan,rat, lincRNA processed_transcript A549@0.160283,AG04450@1.74671,BJ@0.472558,GM12878@0,H1HESC@3.4985,HELAS3@0.375511,HEPG2@0.13143,HMEC@3.63636,HSMM@2.45076,HUVEC@0,K562@0,MCF7@0,NHEK@1.41753,NHLF@0.241078,SKNSHRA@0.987815, 0 0 0 0 ENSG00000177822.3 ENST00000505873.1 chr4:183063536-183064929 3 936 453 intergenic 12.49 0 0,1,0 1 0,1,0 87.9700854700855 133.763796909492 267.145 79.642094017094 124.567328918322 319.939 84.8643162393162 99.1368653421633 288.641 0 0 chimp,dog,elephant,human,macaque,marmoset,orangutan,rat, lincRNA processed_transcript A549@0.160283,AG04450@1.74671,BJ@0.472558,GM12878@0,H1HESC@3.4985,HELAS3@0.375511,HEPG2@0.13143,HMEC@3.63636,HSMM@2.45076,HUVEC@0,K562@0,MCF7@0,NHEK@1.41753,NHLF@0.241078,SKNSHRA@0.987815, 0 0 0 0 ENSG00000177822.3 ENST00000511052.1 chr4:183064331-183065041 2 552 156 intergenic 2.91 0 0,1,0 1 0,1,0 281.657608695652 284.903846153846 210.585 261.179347826087 317.782051282051 268.219 278.449275362319 250.282051282051 218.529 0 0 cat,chimp,cow,dog,elephant,guinea_pig,horse,human,macaque,marmoset,mouse,opossum,orangutan,panda,rabbit,rat, lincRNA retained_intron A549@0.160283,AG04450@1.74671,BJ@0.472558,GM12878@0,H1HESC@3.4985,HELAS3@0.375511,HEPG2@0.13143,HMEC@3.63636,HSMM@2.45076,HUVEC@0,K562@0,MCF7@0,NHEK@1.41753,NHLF@0.241078,SKNSHRA@0.987815, 0 0 0 0 ENSG00000177822.3 ENST00000508968.1 chr4:183064644-183066402 4 583 1169 intronic 0 0 0,0,0 0 0,1,0 242.058319039451 196.129170230967 52.909 233.19897084048 260.635585970915 58.68 250.245283018868 209.704020530368 50.945 0 0 chimp,cow,dog,elephant,guinea_pig,human,macaque,marmoset,mouse,orangutan,panda,pig,rabbit, lincRNA processed_transcript A549@0.160283,AG04450@1.74671,BJ@0.472558,GM12878@0,H1HESC@3.4985,HELAS3@0.375511,HEPG2@0.13143,HMEC@3.63636,HSMM@2.45076,HUVEC@0,K562@0,MCF7@0,NHEK@1.41753,NHLF@0.241078,SKNSHRA@0.987815, 0 0 0 0 ENSG00000248266.1 ENST00000505389.1 chr4:183066005-183111535 2 284 45244 intronic 0 0 0,1,0 0 0,0,0 0 43.5433648660596 229.775 22.2992957746479 60.1425603394925 288.491 12.0492957746479 61.2685217929449 242.317 0 0 chimp,cow,human,macaque,pig, sense_intronic sense_intronic A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000248816.1 ENST00000509283.1 chr4:183619055-183629195 2 516 9622 intronic 1.02 0 0,0,0 0 0,0,0 0 27.6387445437539 0 0 49.2189773435876 4.335 0 53.0950945749325 4.624 0 0 chimp,cow,elephant,horse,human,macaque,marmoset,orangutan,pig,rabbit, antisense antisense A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000248694.1 ENST00000513255.1 chr4:183693718-183695084 2 442 922 exonic 2.26 0 0,0,0 0 0,0,0 109.140271493213 124.223427331887 0 114.545248868778 151.631236442516 7.327 147.886877828054 159.956616052061 9.061 0 0 cat,chimp,dog,guinea_pig,horse,human,macaque,marmoset,opossum,orangutan,panda,rabbit,rat, antisense antisense A549@0,AG04450@0.036312,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0.211899,NHEK@0.035102,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000251128.1 ENST00000511846.1 chr4:184154781-184161787 2 402 6602 intronic 0 1 0,0,0 0 0,0,0 0 4.40321114813693 0 11.3880597014925 10.588609512269 0 13.134328358209 14.7166010299909 0 0 0 chimp,dog,elephant,guinea_pig,horse,human,macaque,marmoset,orangutan,panda, antisense antisense A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0.0072035,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0.0520295,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000232648.3 ENST00000457303.3 chr4:184416091-184425647 3 556 8996 intergenic 4.30 0 0,1,0 1 0,0,0 0 5.81658514895509 185.886 165.526978417266 11.8650511338373 315.743 16.0269784172662 16.1287238772788 296.339 0 0 cat,chimp,dog,human,macaque,marmoset,orangutan,panda, antisense antisense A549@0.074676,AG04450@0.0690295,BJ@0.102281,GM12878@0.0813665,H1HESC@0.109188,HELAS3@0.117342,HEPG2@0.098073,HMEC@0.131848,HSMM@0.0159145,HUVEC@0.0579955,K562@0.0807585,MCF7@0.025421,NHEK@0.158207,NHLF@0.0419385,SKNSHRA@0.115264, 0 0 0 0 ENSG00000248206.1 ENST00000505025.1 chr4:184908831-184909903 3 619 449 intronic 1.08 0 0,0,0 0 0,0,0 150.705977382876 79.1492204899777 7.59 167.54281098546 206.543429844098 11.329 159.197092084006 187.407572383074 9.913 0 0 cat,chimp,cow,dog,elephant,guinea_pig,horse,human,macaque,marmoset,mouse,orangutan,panda,pig,rabbit, sense_intronic sense_intronic A549@0.75632,AG04450@0.230146,BJ@0.0250045,GM12878@0,H1HESC@0.012803,HELAS3@0.092173,HEPG2@0.024802,HMEC@0.037503,HSMM@0.070938,HUVEC@0,K562@0,MCF7@0.0535655,NHEK@0.06953,NHLF@0.062282,SKNSHRA@0.238841, 0 0 0 0 ENSG00000180712.3 ENST00000317596.3 chr4:185261909-185275130 3 2150 11067 intergenic 6.14 0 1,1,1 0 0,1,0 0 0.907020872865275 0 1.11162790697674 3.00289147917231 0 1.16744186046512 3.67823258335592 0 0 1 chimp,human,marmoset,orangutan, lincRNA processed_transcript A549@0.017448,AG04450@0.011202,BJ@0.014852,GM12878@42.1844,H1HESC@0.104188,HELAS3@0.070026,HEPG2@0.313765,HMEC@0.005705,HSMM@0.0089105,HUVEC@0.0572855,K562@0.029765,MCF7@0.0383965,NHEK@0.0317383,NHLF@0.0080795,SKNSHRA@0.052442, 0 0 0 0 ENSG00000180712.3 ENST00000511465.1 chr4:185262843-185269065 2 562 5658 intergenic 7.60 0 0,0,0 0 0,1,0 0 1.77412513255567 0 0 3.27942735949099 3.382 0 3.4406150583245 6.187 0 0 chimp,dog,human,macaque,marmoset,orangutan, lincRNA processed_transcript A549@0.017448,AG04450@0.011202,BJ@0.014852,GM12878@42.1844,H1HESC@0.104188,HELAS3@0.070026,HEPG2@0.313765,HMEC@0.005705,HSMM@0.0089105,HUVEC@0.0572855,K562@0.029765,MCF7@0.0383965,NHEK@0.0317383,NHLF@0.0080795,SKNSHRA@0.052442, 0 0 0 0 ENSG00000249096.1 ENST00000512674.1 chr4:185286341-185291024 3 2037 2642 intergenic 0.20 0 0,0,0 0 0,0,0 0 0 0 0 0 12.279 0.954344624447717 0 15.885 1 1 chimp,human,macaque,marmoset,orangutan, lincRNA lincRNA A549@0.033883,AG04450@0.0627905,BJ@0.0339215,GM12878@1.17426,H1HESC@0.125822,HELAS3@0.089835,HEPG2@0.122091,HMEC@0.006022,HSMM@0.0147735,HUVEC@0.0455835,K562@0.033513,MCF7@0.026553,NHEK@0.085349,NHLF@0.0608665,SKNSHRA@0.259032, 0 0 0 0 ENSG00000254233.1 ENST00000522554.1 chr4:185505247-185546184 2 800 40135 intergenic 3.35 0 0,0,1 0 0,0,0 0 0.259524106141772 0 4.4625 0.609418213529338 0 9.065 6.90676466924131 0 0 0 chimp,cow,horse,human,orangutan,panda,pig, lincRNA lincRNA A549@0.007377,AG04450@0.00388,BJ@0.005205,GM12878@0.056865,H1HESC@0.004386,HELAS3@0.0727995,HEPG2@1.29522,HMEC@0,HSMM@0.0154925,HUVEC@0,K562@0.0033385,MCF7@0,NHEK@0.00485833,NHLF@0.0032145,SKNSHRA@0.0154755, 0 0 0 0 ENSG00000254233.1 ENST00000520280.1 chr4:185540043-185546033 3 604 5382 intergenic 2.07 0 0,0,0 0 0,0,0 0 0 0 0 0 0 6.00331125827815 0 0 0 1 chimp,human,macaque,orangutan, lincRNA lincRNA A549@0.007377,AG04450@0.00388,BJ@0.005205,GM12878@0.056865,H1HESC@0.004386,HELAS3@0.0727995,HEPG2@1.29522,HMEC@0,HSMM@0.0154925,HUVEC@0,K562@0.0033385,MCF7@0,NHEK@0.00485833,NHLF@0.0032145,SKNSHRA@0.0154755, 0 0 0 0 ENSG00000254233.1 ENST00000519173.1 chr4:185540200-185546096 2 471 5423 intergenic 9.74 0 0,0,1 0 0,0,0 0 0 0 0 0 0 7.69851380042463 0 0 0 0 chimp,horse,human,macaque,orangutan, lincRNA lincRNA A549@0.007377,AG04450@0.00388,BJ@0.005205,GM12878@0.056865,H1HESC@0.004386,HELAS3@0.0727995,HEPG2@1.29522,HMEC@0,HSMM@0.0154925,HUVEC@0,K562@0.0033385,MCF7@0,NHEK@0.00485833,NHLF@0.0032145,SKNSHRA@0.0154755, 0 0 0 0 ENSG00000251230.1 ENST00000511703.1 chr4:185765739-185776905 3 726 10436 intergenic 6.48 0 1,1,1 0 0,0,0 0 0 0 0 0.531429666538904 4.86 0 1.3710233806056 4.896 1 1 chimp,human,macaque,marmoset,orangutan, lincRNA processed_transcript A549@0.033011,AG04450@0,BJ@0,GM12878@0.06856,H1HESC@0,HELAS3@0.0144935,HEPG2@0.0133425,HMEC@0,HSMM@0,HUVEC@0,K562@0.950345,MCF7@0,NHEK@0.003614,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000251230.1 ENST00000510284.1 chr4:185767432-185776836 3 573 8827 intergenic 2.91 0 0,1,0 0 0,0,0 0 0 0 0 0.62829953551603 4.86 0 1.62093576526566 4.896 0 0 chimp,horse,human,macaque,marmoset,orangutan, lincRNA processed_transcript A549@0.033011,AG04450@0,BJ@0,GM12878@0.06856,H1HESC@0,HELAS3@0.0144935,HEPG2@0.0133425,HMEC@0,HSMM@0,HUVEC@0,K562@0.950345,MCF7@0,NHEK@0.003614,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000249173.1 ENST00000506479.1 chr4:185815025-185819918 3 631 4258 intergenic 2.83 0 0,0,0 0 0,0,0 0 0 0 0 1.07797087834664 3.588 0 1.3381869422264 3.757 0 1 chimp,human,macaque,orangutan, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000249173.1 ENST00000507183.1 chr4:185815055-185820608 3 618 4931 intergenic 2.83 0 0,1,1 0 0,0,0 0 0 0 0 0.930845670249442 3.588 0 1.15554654228351 3.757 0 1 chimp,human,macaque,orangutan, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000249173.1 ENST00000515864.1 chr4:185815059-185820605 3 598 4944 intergenic 2.83 0 0,1,1 0 0,0,0 0 0 0 0 0.928398058252427 3.588 0 1.15250809061489 3.757 0 1 chimp,human,macaque,orangutan, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000248517.1 ENST00000505053.1 chr4:185910151-185926340 2 909 15278 intergenic 7.00 0 0,0,0 0 0,0,0 0 0 0 0 0.632085351485797 10.137 0 0.656957716978662 19.906 1 1 chimp,human,macaque,marmoset,orangutan, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0.0065245,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0.002207,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000250754.1 ENST00000506338.1 chr4:185973050-185983970 4 844 10070 intergenic 3.98 0 0,0,0 0 0,0,0 22.0734597156398 22.3635551142006 0 36.0390995260664 34.7421052631579 0 35.925355450237 37.909731876862 0 0 0 cat,chimp,dog,horse,human,macaque,marmoset,orangutan,panda,pig,rabbit, processed_transcript processed_transcript A549@0,AG04450@0.0038025,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000250754.1 ENST00000509017.1 chr4:185973050-186028402 9 2177 53159 intergenic 3.98 0 0,0,1 0 0,0,0 170.937069361507 17.7110931356873 0 145.092328892972 25.8139731748152 0 175.121267799724 29.062454146993 0 0 0 cat,chimp,horse,human,macaque,marmoset,orangutan,panda, processed_transcript processed_transcript A549@0,AG04450@0.0038025,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000250754.1 ENST00000511746.1 chr4:185983611-185993227 5 1187 8421 intergenic 0.68 0 0,0,0 0 0,0,0 297.809604043808 27.431421446384 0 240.479359730413 33.7662985393659 0.283 292.285593934288 51.0610378814868 0.289 1 1 chimp,human,macaque,marmoset,orangutan, processed_transcript processed_transcript A549@0,AG04450@0.0038025,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000250410.1 ENST00000514884.1 chr4:186291879-186312082 3 584 19615 exonic 4.84 0 0,0,0 0 0,0,0 25.2054794520548 6.04817741524344 0.69 49.3972602739726 19.6108590364517 22.666 44.5702054794521 18.844608717818 25.377 0 1 human,macaque, antisense antisense A549@0.300277,AG04450@0.153372,BJ@0.526449,GM12878@2.0033,H1HESC@0.335066,HELAS3@0.428528,HEPG2@0.541409,HMEC@0.027902,HSMM@0.0467025,HUVEC@1.06441,K562@0.762649,MCF7@0.21611,NHEK@0.087906,NHLF@0.0297315,SKNSHRA@0.356714, 0 0 0 0 ENSG00000233110.1 ENST00000411847.1 chr4:186509063-186515157 4 1785 4303 exonic 4.15 1 0,1,0 0 0,0,0 50.0705882352941 5.78201254938415 45.55 59.8806722689076 25.1096909133163 126.336 62.5714285714286 26.1824308621892 146.587 0 0 chimp,cow,elephant,human,macaque,orangutan,panda,rabbit, antisense antisense A549@0,AG04450@0,BJ@0,GM12878@0.0022535,H1HESC@0.052465,HELAS3@0.0077515,HEPG2@0.006081,HMEC@0,HSMM@0.0023005,HUVEC@0,K562@0,MCF7@0,NHEK@0.001476,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000235902.1 ENST00000447277.1 chr4:186587039-186596571 2 616 8914 exonic 4.47 0 0,0,1 0 0,0,0 33.8262987012987 3.21135292797846 44.622 46.3538961038961 6.66378730087503 13.887 63.4707792207792 7.37323311644604 69.288 0 0 chimp,cow,dog,horse,human,marmoset,orangutan,panda, antisense antisense A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0.347859,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0.0033295,HUVEC@0,K562@0,MCF7@0.0065065,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000235149.1 ENST00000456728.1 chr4:186839294-186840614 2 547 771 intronic 5.68 0 0,1,0 0 0,0,0 0 0 0 4.44241316270567 0 0 4.57404021937843 0 0 0 0 chimp,elephant,horse,human,macaque,marmoset,orangutan,rabbit, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0.0075575,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0.05219,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000251165.1 ENST00000505103.1 chr4:187207248-187422151 4 1174 213723 exonic 11.73 0 0,1,0 0 0,0,0 27.9761499148211 0.801631083224548 0 36.9965928449744 1.69061355118541 0 37.6567291311755 20.1361669076328 0 0 0 chimp,horse,human,marmoset,orangutan, processed_transcript processed_transcript A549@0,AG04450@0.0058895,BJ@0.0041725,GM12878@0,H1HESC@0.054015,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0.130276,MCF7@0.008003,NHEK@0,NHLF@0.0170375,SKNSHRA@0, 0 0 0 0 ENSG00000251165.1 ENST00000510172.1 chr4:187344882-187347447 2 160 2403 intergenic 0 1 0,1,0 0 0,0,0 0 0 0 0 1.85767790262172 0 0 1.96504369538077 0 0 0 cat,chimp,dog,elephant,horse,human,macaque,marmoset,orangutan, processed_transcript processed_transcript A549@0,AG04450@0.0058895,BJ@0.0041725,GM12878@0,H1HESC@0.054015,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0.130276,MCF7@0.008003,NHEK@0,NHLF@0.0170375,SKNSHRA@0, 0 0 0 0 ENSG00000250829.1 ENST00000507644.1 chr4:187812431-187813520 2 186 901 intergenic 0 0 0,0,1 0 0,0,0 0 0 0 0 0 0 0 0 0 0 1 chimp,human,orangutan, lincRNA lincRNA A549@0,AG04450@0.0343035,BJ@0,GM12878@0.037404,H1HESC@0.033103,HELAS3@0.012019,HEPG2@0.22834,HMEC@0,HSMM@0,HUVEC@0.0185905,K562@0.705654,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0.014307, 0 0 0 0 ENSG00000249742.1 ENST00000503037.1 chr4:187900644-187943127 3 471 42008 intergenic -5.26 1 0,0,0 0 0,0,0 0 3.26725861740621 0 0 5.99319177299562 1.984 0 6.91663492668063 2.12 0 0 chimp,dog,horse,human,macaque,marmoset,orangutan,panda,rabbit, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000250971.1 ENST00000507776.1 chr4:187981253-187982084 2 419 410 intergenic 5.83 0 0,1,0 0 0,0,0 0 0 0 4.56324582338902 10.7707317073171 0 4.79236276849642 8.78048780487805 0 0 0 chimp,cow,horse,human,macaque,marmoset,orangutan, lincRNA lincRNA A549@0,AG04450@0.005324,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0.015504,HMEC@0,HSMM@0,HUVEC@0,K562@0.0110305,MCF7@0,NHEK@0.075216,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000249747.1 ENST00000515222.1 chr4:188123140-188130500 3 575 6781 intergenic 1.03 0 0,0,0 0 0,0,0 0 0 0 0 0 0 0 0 0 1 1 chimp,human,macaque,marmoset,orangutan, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0.004632,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000249747.1 ENST00000503637.1 chr4:188123187-188124768 2 741 838 intergenic -2.89 0 0,0,0 0 0,0,0 0 0 0 0 0 0 0 0 0 0 0 chimp,horse,human,macaque,marmoset,orangutan,pig, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0.004632,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000250658.1 ENST00000511385.1 chr4:188225237-188230836 4 2110 3483 intergenic 3.65 1 0,1,0 0 0,0,0 0 0 0 0 0 0 0 0 0 0 0 human, lincRNA lincRNA A549@0,AG04450@0,BJ@0.071924,GM12878@0,H1HESC@0.0852435,HELAS3@0.003949,HEPG2@0.006175,HMEC@0.003874,HSMM@0.01523,HUVEC@0.001408,K562@0.27724,MCF7@0,NHEK@0.00798433,NHLF@0.017342,SKNSHRA@0, 0 0 0 0 ENSG00000250042.1 ENST00000509058.1 chr4:188291802-188293075 3 495 774 intergenic -0.84 0 0,0,0 0 0,0,0 0 0 0 0 0 2.04 0 0 2.072 0 0 chimp,cow,horse,human,macaque,marmoset,mouse,orangutan,pig,rabbit, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000250620.1 ENST00000503677.1 chr4:188334718-188336851 2 534 1597 intergenic -4.01 0 0,0,0 0 0,0,0 185.565543071161 0 0 292.232209737828 0 3.346 373.631086142322 0 2.176 0 0 chimp,cow,dog,elephant,horse,human,macaque,marmoset,opossum,orangutan,pig,rabbit,rat, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000251490.1 ENST00000512464.1 chr4:188437307-188438362 2 697 356 intergenic -1.12 0 0,0,1 0 0,0,0 0 0 0 0 0 0 2.78909612625538 0 0 0 0 cat,chimp,cow,dog,elephant,guinea_pig,horse,human,macaque,marmoset,orangutan,panda,pig,rabbit,rat, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0.0512905,NHEK@0,NHLF@0,SKNSHRA@0.115769, 0 0 0 0 ENSG00000250590.1 ENST00000515660.1 chr4:188454032-188477103 3 581 22486 intergenic -5.61 1 0,0,0 0 0,0,0 0 9.27492662100863 0 0 17.0623054344926 2.151 0 18.6018411456017 2.331 0 1 chimp,human,macaque,orangutan, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0.0129715,NHEK@0,NHLF@0,SKNSHRA@0.28711, 0 0 0 0 ENSG00000250590.1 ENST00000507817.1 chr4:188454032-188593795 3 480 139279 intergenic -3.43 1 0,0,0 0 0,0,0 0 1.8215165243863 0 0 8.18889423387589 1.673 0 8.68363500599516 1.757 1 1 chimp,human,macaque,marmoset,orangutan, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0.0129715,NHEK@0,NHLF@0,SKNSHRA@0.28711, 0 0 0 0 ENSG00000250590.1 ENST00000514767.1 chr4:188454036-188477058 2 449 22571 intergenic -1.64 1 0,0,0 0 0,0,0 0 9.23999822781445 0 0 16.9980505958974 2.151 0 18.5317885782641 2.331 0 0 chimp,horse,human,macaque,orangutan,panda, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0.0129715,NHEK@0,NHLF@0,SKNSHRA@0.28711, 0 0 0 0 ENSG00000250590.1 ENST00000502952.1 chr4:188477065-188514081 5 559 36449 intergenic -2.26 0 0,0,0 0 0,0,0 16.5295169946333 0 0 0 10.5280254602321 0 0 10.3194875030865 0 0 0 chimp,cow,dog,guinea_pig,horse,human,macaque,marmoset,orangutan,panda,pig, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0.0129715,NHEK@0,NHLF@0,SKNSHRA@0.28711, 0 0 0 0 ENSG00000249642.1 ENST00000505488.1 chr4:188534919-188581523 3 564 46036 intergenic -1.86 1 0,0,1 0 0,0,0 0 0.404943956903293 0 0 3.17104005560865 0 0 3.66693457294291 0 0 0 cat,chimp,horse,human, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000249642.1 ENST00000509212.1 chr4:188571621-188581521 2 424 9474 intergenic -1.16 1 0,0,1 0 0,0,0 0 1.96770107663078 0 0 6.15875026388009 0 0 5.56523115896137 0 0 0 chimp,elephant,human,macaque,marmoset,orangutan, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000247130.2 ENST00000501322.2 chr4:189061976-189064533 2 503 2052 intronic 0 0 0,1,1 0 0,0,0 0 6.62768031189084 0 0 15.057992202729 44.141 0 16.0331384015595 44.567 1 1 chimp,human,macaque,marmoset,orangutan, antisense antisense A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 2 44 0 0 ENSG00000248370.1 ENST00000502419.1 chr4:189081219-189082293 2 675 397 intergenic -2.88 1 0,0,0 1 0,0,0 0 0 0 5.86962962962963 0 0 5.99407407407407 0 0 0 0 cat,chimp,dog,elephant,horse,human,macaque,orangutan,panda,rabbit, lincRNA lincRNA A549@0.00816,AG04450@0,BJ@0,GM12878@0.0059555,H1HESC@0,HELAS3@7.16687,HEPG2@0.273983,HMEC@0,HSMM@0,HUVEC@0,K562@0.0286265,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000249378.1 ENST00000512839.1 chr4:189321890-189407019 5 711 84410 intergenic 0.68 0 0,1,0 0 0,0,0 0 0.63443904750622 0 0 5.76442364648738 0 0 11.8127473048217 0 0 0 chimp,horse,human,macaque,orangutan,pig, lincRNA processed_transcript A549@0.126041,AG04450@0.0126505,BJ@0,GM12878@0.0185905,H1HESC@0.483997,HELAS3@0.396989,HEPG2@0.228031,HMEC@0.092267,HSMM@0.0040285,HUVEC@0.0054835,K562@0,MCF7@0,NHEK@0.16891,NHLF@0.009978,SKNSHRA@0.422883, 0 0 0 0 ENSG00000249378.1 ENST00000513313.1 chr4:189321890-189407019 3 379 84746 intergenic 3.68 0 0,1,0 0 0,0,0 0 0.631923630613834 0 0 5.74156892360701 0 0 11.7659122554457 0 1 1 chimp,human,macaque,marmoset,orangutan, lincRNA processed_transcript A549@0.126041,AG04450@0.0126505,BJ@0,GM12878@0.0185905,H1HESC@0.483997,HELAS3@0.396989,HEPG2@0.228031,HMEC@0.092267,HSMM@0.0040285,HUVEC@0.0054835,K562@0,MCF7@0,NHEK@0.16891,NHLF@0.009978,SKNSHRA@0.422883, 0 0 0 0 ENSG00000249378.1 ENST00000510832.1 chr4:189376732-189459706 6 2429 80535 intergenic 10.91 0 0,1,0 0 0,0,0 0 0.590054013782827 0 1.04981473857555 4.55606878996709 0 1.30918073281186 13.1810641336065 0 0 0 chimp,dog,horse,human,macaque,orangutan, lincRNA processed_transcript A549@0.126041,AG04450@0.0126505,BJ@0,GM12878@0.0185905,H1HESC@0.483997,HELAS3@0.396989,HEPG2@0.228031,HMEC@0.092267,HSMM@0.0040285,HUVEC@0.0054835,K562@0,MCF7@0,NHEK@0.16891,NHLF@0.009978,SKNSHRA@0.422883, 0 0 0 0 ENSG00000249378.1 ENST00000510005.1 chr4:189376747-189523062 5 463 145844 intergenic 2.78 0 1,1,1 0 0,0,0 0 0.911789309124818 0 0 4.41581415759304 0 0 9.4137091687008 0 0 0 chimp,dog,horse,human,macaque,marmoset,orangutan, lincRNA processed_transcript A549@0.126041,AG04450@0.0126505,BJ@0,GM12878@0.0185905,H1HESC@0.483997,HELAS3@0.396989,HEPG2@0.228031,HMEC@0.092267,HSMM@0.0040285,HUVEC@0.0054835,K562@0,MCF7@0,NHEK@0.16891,NHLF@0.009978,SKNSHRA@0.422883, 0 0 0 0 ENSG00000249378.1 ENST00000503458.1 chr4:189376779-189523060 4 371 145904 intergenic 3.06 0 1,1,1 0 0,0,0 0 0.91141435464415 0 0 4.41399824542165 0 0 9.40983797565523 0 0 0 chimp,dog,horse,human,macaque,marmoset,orangutan, lincRNA processed_transcript A549@0.126041,AG04450@0.0126505,BJ@0,GM12878@0.0185905,H1HESC@0.483997,HELAS3@0.396989,HEPG2@0.228031,HMEC@0.092267,HSMM@0.0040285,HUVEC@0.0054835,K562@0,MCF7@0,NHEK@0.16891,NHLF@0.009978,SKNSHRA@0.422883, 0 0 0 0 ENSG00000249378.1 ENST00000503580.1 chr4:189406933-189602205 2 416 194854 intergenic 5.56 0 0,0,1 0 0,0,0 0 1.53326080039414 0 0 4.55729417923163 0 0 9.44008847650035 0 0 0 chimp,cow,dog,horse,human,macaque,marmoset,orangutan,panda,pig, lincRNA processed_transcript A549@0.126041,AG04450@0.0126505,BJ@0,GM12878@0.0185905,H1HESC@0.483997,HELAS3@0.396989,HEPG2@0.228031,HMEC@0.092267,HSMM@0.0040285,HUVEC@0.0054835,K562@0,MCF7@0,NHEK@0.16891,NHLF@0.009978,SKNSHRA@0.422883, 0 0 0 0 ENSG00000249269.1 ENST00000505178.1 chr4:189678833-189700133 3 434 20862 intergenic 2.67 0 0,1,1 0 0,0,0 0 0.818713450292398 0 0 2.33338126737609 26.74 0 3.39277154635222 27.37 0 0 chimp,horse,human,macaque,marmoset,orangutan, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000251619.1 ENST00000504165.1 chr4:189697811-189706665 3 423 8427 intergenic -0.64 0 0,1,0 0 0,0,0 0 0 0 0 10.8504805980776 0 0 13.2783908864365 0 0 0 chimp,horse,human,macaque,marmoset,orangutan, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000250626.2 ENST00000514297.2 chr4:189698833-189717787 3 1988 16962 intergenic 1.56 0 0,0,0 0 0,0,0 0 2.16990920881971 0 0 11.7147742011555 0 17.3345070422535 14.2561018747789 376.883 0 1 chimp,human,macaque,orangutan, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000250024.1 ENST00000508799.1 chr4:189911869-189923229 2 644 10714 intergenic -8.48 1 0,0,0 0 0,0,0 0 2.98982639537054 0 5.30900621118012 9.93065148403957 0 5.61180124223602 9.53042747806608 0 0 1 chimp,human,orangutan, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000251310.1 ENST00000514966.1 chr4:190114254-190126031 2 410 11365 intergenic 0.95 1 0,0,0 0 0,0,0 0 1.04927408710955 0 0 6.26159260888693 0 0 6.57870655521337 6.734 0 1 chimp,human,macaque,marmoset, lincRNA lincRNA A549@0.0753425,AG04450@0.0815855,BJ@0,GM12878@0.19586,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0.0046835,SKNSHRA@0, 0 0 0 0 ENSG00000249877.1 ENST00000504057.1 chr4:190209831-190212490 2 337 2320 intergenic -1.35 0 0,0,0 0 0,0,0 0 0 0 0 0 0 0 0 0 0 1 chimp,human,macaque,orangutan, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0.0438335,HEPG2@0.018855,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000250739.1 ENST00000513681.1 chr4:190580759-190582640 3 876 1001 intergenic 1.67 1 0,0,0 0 0,0,0 0 0 0 30.8835616438356 73.4105894105894 0 30.7602739726027 75.4515484515484 0 0 0 chimp,dog,human,macaque,marmoset,orangutan,rat, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0.0053335,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0.003046,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000245685.2 ENST00000506276.1 chr4:190701490-190861426 3 700 159232 intergenic -1.63 0 0,1,0 0 0,0,0 0 2.38794337821543 0 85.8885714285714 12.6187952170418 31.867 96.5828571428571 17.8648701266077 32.488 0 0 chimp,cow,dog,guinea_pig,horse,human,macaque,marmoset,mouse,opossum,orangutan,panda,rabbit, lincRNA processed_transcript A549@0.072437,AG04450@0.0729595,BJ@0.118245,GM12878@0.101175,H1HESC@0.158707,HELAS3@0.0759465,HEPG2@0.0027865,HMEC@0.009738,HSMM@0.0027105,HUVEC@0.039326,K562@0.016091,MCF7@0.024811,NHEK@0.027257,NHLF@0.0391735,SKNSHRA@0.136779, 0 0 0 0 ENSG00000245685.2 ENST00000511785.1 chr4:190742266-190838477 3 976 95231 intergenic -0.41 0 0,1,1 0 0,0,0 9.01639344262295 3.08922514727347 0 47.4252049180328 17.4252291795739 0 53.9108606557377 23.1070134725037 0 0 1 chimp,human,macaque, lincRNA processed_transcript A549@0.072437,AG04450@0.0729595,BJ@0.118245,GM12878@0.101175,H1HESC@0.158707,HELAS3@0.0759465,HEPG2@0.0027865,HMEC@0.009738,HSMM@0.0027105,HUVEC@0.039326,K562@0.016091,MCF7@0.024811,NHEK@0.027257,NHLF@0.0391735,SKNSHRA@0.136779, 0 0 0 0 ENSG00000245685.2 ENST00000508156.1 chr4:190742635-190860896 4 513 117742 intergenic 1.98 0 0,0,0 0 0,0,0 17.1539961013645 2.49859863090486 0 91.5146198830409 14.0093764332184 0 97.6959064327486 18.6007372050755 0 0 0 cat,chimp,dog,elephant,guinea_pig,horse,human,macaque,marmoset,mouse,orangutan,rabbit, lincRNA processed_transcript A549@0.072437,AG04450@0.0729595,BJ@0.118245,GM12878@0.101175,H1HESC@0.158707,HELAS3@0.0759465,HEPG2@0.0027865,HMEC@0.009738,HSMM@0.0027105,HUVEC@0.039326,K562@0.016091,MCF7@0.024811,NHEK@0.027257,NHLF@0.0391735,SKNSHRA@0.136779, 0 0 0 0 ENSG00000245685.2 ENST00000501825.2 chr4:190785417-190860992 3 838 74733 intergenic 1.98 0 0,0,0 0 0,0,0 0 1.23870311642782 0 48.5429594272076 6.80732741894478 4.566 52.0023866348449 9.03461656831654 4.714 0 1 human,macaque,marmoset, lincRNA processed_transcript A549@0.072437,AG04450@0.0729595,BJ@0.118245,GM12878@0.101175,H1HESC@0.158707,HELAS3@0.0759465,HEPG2@0.0027865,HMEC@0.009738,HSMM@0.0027105,HUVEC@0.039326,K562@0.016091,MCF7@0.024811,NHEK@0.027257,NHLF@0.0391735,SKNSHRA@0.136779, 0 0 0 0 ENSG00000250666.1 ENST00000503609.1 chr4:190802670-190806023 2 590 2761 intergenic -1.02 1 0,0,1 0 0,0,0 0 0 0 0 19.5298804780876 2.805 77.3440677966102 35.0134009416878 2.849 0 0 cat,chimp,cow,elephant,human,macaque,marmoset,orangutan,pig, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0.0164285,K562@4.29099,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000249430.1 ENST00000512035.1 chr5:92266-139978 3 702 47006 intergenic -7.32 0 0,1,0 1 0,1,0 0 0 0 47.002849002849 0.245479300514828 0 318.182336182336 10.3242990256563 11.592 0 0 cat,chimp,cow,dog,elephant,guinea_pig,horse,human,macaque,marmoset,mouse,opossum,orangutan,panda,pig,platypus,rabbit,rat, lincRNA lincRNA A549@0.260607,AG04450@0.107683,BJ@0.58627,GM12878@0,H1HESC@17.9808,HELAS3@0.0118415,HEPG2@0.0123445,HMEC@0,HSMM@0.005837,HUVEC@0.0042215,K562@0,MCF7@0.247809,NHEK@0.0802107,NHLF@0.0192385,SKNSHRA@0.864717, 0 0 0 0 ENSG00000248925.1 ENST00000512642.1 chr5:269973-271631 2 520 1136 intergenic -1.30 0 0,1,0 1 0,0,0 0 0 0 6.375 0 46.027 6.475 0 42.859 1 1 chimp,human,macaque,marmoset,orangutan, antisense antisense A549@0.214673,AG04450@0.333003,BJ@0.0981595,GM12878@0.2218,H1HESC@0.292331,HELAS3@0.792474,HEPG2@0.148116,HMEC@0.047065,HSMM@0.533803,HUVEC@0.0313585,K562@0.938514,MCF7@0.0272225,NHEK@0.0171183,NHLF@0.155747,SKNSHRA@0.223788, 0 0 0 0 ENSG00000225138.2 ENST00000431004.1 chr5:478238-479604 1 1366 0 intronic -0.92 0 0,1,0 0 0,1,0 0 0 15.635 0 0 38.786 41.49560761347 0 43.634 0 1 chimp,human,orangutan, antisense antisense A549@0.148998,AG04450@0.496668,BJ@1.30819,GM12878@0.25653,H1HESC@1.07942,HELAS3@0.77463,HEPG2@0.185536,HMEC@1.28133,HSMM@0.307424,HUVEC@0.575417,K562@0.194148,MCF7@1.06624,NHEK@0.895383,NHLF@0.178697,SKNSHRA@0.978336, 0 0 0 0 ENSG00000225138.2 ENST00000534918.1 chr5:478238-480999 1 2761 0 exonic 10.13 1 0,1,1 0 0,1,0 15.7551611734879 0 15.635 20.2509960159363 0 38.786 39.8011590003622 0 43.634 1 1 chimp,human,macaque,marmoset,orangutan, antisense antisense A549@0.148998,AG04450@0.496668,BJ@1.30819,GM12878@0.25653,H1HESC@1.07942,HELAS3@0.77463,HEPG2@0.185536,HMEC@1.28133,HSMM@0.307424,HUVEC@0.575417,K562@0.194148,MCF7@1.06624,NHEK@0.895383,NHLF@0.178697,SKNSHRA@0.978336, 0 0 0 0 ENSG00000250385.1 ENST00000515085.1 chr5:524820-526709 2 440 1447 intergenic 3.15 0 0,1,0 0 0,0,0 0 0 0 0 0 67.991 0 0 66.924 0 0 cat,human,macaque,marmoset,orangutan, antisense antisense A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0.018514,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000249650.1 ENST00000506629.1 chr5:602735-612325 3 588 8998 intergenic 1.08 0 0,1,0 0 0,0,0 0 0 0 0 0 16.312 0 26.2918426316959 19.168 0 1 chimp,human,macaque,orangutan, antisense antisense A549@0.0073455,AG04450@0.05484,BJ@0.047971,GM12878@0.116462,H1HESC@0.172036,HELAS3@0.105928,HEPG2@0.132721,HMEC@0,HSMM@0.007714,HUVEC@0.0059135,K562@0.0392125,MCF7@0.21992,NHEK@0.020031,NHLF@0,SKNSHRA@0.0949235, 0 0 0 0 ENSG00000248949.1 ENST00000507989.1 chr5:946430-956635 2 557 9646 intergenic -4.87 0 0,1,0 0 0,0,0 0 0 0 0 0.915612689197595 0 0 8.03856520837653 11.268 1 1 chimp,human,macaque,marmoset,orangutan, lincRNA lincRNA A549@0.0098825,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0.014639,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000215246.4 ENST00000543306.1 chr5:987295-990738 1 3443 0 intergenic 6.45 0 0,0,1 0 0,1,1 0 0 0 0 0 0 1.38512924774906 0 0 0 1 chimp,human,orangutan, antisense antisense A549@0.0654765,AG04450@0.0063375,BJ@0.002132,GM12878@0.0389045,H1HESC@0.040416,HELAS3@0.197683,HEPG2@0.0471055,HMEC@0,HSMM@0.000662,HUVEC@0,K562@0.008545,MCF7@0.000584,NHEK@0.008977,NHLF@0.0640955,SKNSHRA@0.0151425, 0 0 0 0 ENSG00000215246.4 ENST00000399869.1 chr5:987295-997423 2 3480 6646 intergenic 6.45 0 0,0,1 0 0,1,1 0 0 0 0 0 0 1.37040229885057 0 0 0 1 chimp,human,orangutan, antisense antisense A549@0.0654765,AG04450@0.0063375,BJ@0.002132,GM12878@0.0389045,H1HESC@0.040416,HELAS3@0.197683,HEPG2@0.0471055,HMEC@0,HSMM@0.000662,HUVEC@0,K562@0.008545,MCF7@0.000584,NHEK@0.008977,NHLF@0.0640955,SKNSHRA@0.0151425, 0 0 0 0 ENSG00000249622.1 ENST00000502737.1 chr5:1004860-1006734 2 1697 175 intergenic 20.34 0 1,1,1 0 0,0,0 0 0 0 0 0 0 0 0 0 0 1 chimp,human,macaque, lincRNA lincRNA A549@0.0681025,AG04450@0,BJ@0,GM12878@0,H1HESC@0.0438245,HELAS3@0.003124,HEPG2@0.02033,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0.0107517,NHLF@0.0091875,SKNSHRA@0.0026755, 0 0 0 0 ENSG00000249201.2 ENST00000514376.1 chr5:1173256-1178720 5 1752 3704 intergenic 3.48 0 1,1,1 0 0,0,0 0 0 0 0 0 0 1.94178082191781 0 0 0 1 chimp,human,macaque, antisense antisense A549@0.0012355,AG04450@0,BJ@0,GM12878@0,H1HESC@0.00902,HELAS3@0.110151,HEPG2@1.1506,HMEC@0,HSMM@0,HUVEC@0.001384,K562@0.035653,MCF7@0.004681,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000249201.2 ENST00000512572.1 chr5:1175512-1178709 3 1020 2173 intergenic 1.61 0 0,1,0 0 0,0,0 0 0 0 0 0 0 0 0 0 0 1 chimp,human,macaque,orangutan, antisense antisense A549@0.0012355,AG04450@0,BJ@0,GM12878@0,H1HESC@0.00902,HELAS3@0.110151,HEPG2@1.1506,HMEC@0,HSMM@0,HUVEC@0.001384,K562@0.035653,MCF7@0.004681,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000249201.2 ENST00000505972.2 chr5:1176072-1178661 2 695 1892 intergenic 1.61 0 0,1,0 0 0,0,0 0 0 0 0 0 0 0 0 0 0 1 chimp,human,macaque,orangutan, antisense antisense A549@0.0012355,AG04450@0,BJ@0,GM12878@0,H1HESC@0.00902,HELAS3@0.110151,HEPG2@1.1506,HMEC@0,HSMM@0,HUVEC@0.001384,K562@0.035653,MCF7@0.004681,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000251532.1 ENST00000503113.1 chr5:1544222-1551825 4 688 6909 intergenic 1.16 0 0,0,0 0 0,0,0 0 0 0 0 0 0 0 48.5510204081633 0 0 1 chimp,human,macaque,orangutan, lincRNA lincRNA A549@0,AG04450@0,BJ@0.0213465,GM12878@0.0717185,H1HESC@0.04391,HELAS3@0.385145,HEPG2@0.299153,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0.189389,NHEK@0,NHLF@0.0056395,SKNSHRA@0.009842, 0 0 0 0 ENSG00000249966.1 ENST00000503386.1 chr5:1851064-1851611 2 426 119 intergenic 0 0 0,0,0 0 0,0,0 0 0 0 0 0 0 0 0 4.896 1 1 chimp,human,macaque,marmoset,orangutan, antisense antisense A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000250417.1 ENST00000509455.1 chr5:1856084-1856682 2 491 105 intergenic 1.89 1 0,1,0 0 0,0,0 0 0 0 80.4887983706721 0 0 78.010183299389 0 14.278 0 0 cat,chimp,elephant,human,macaque,marmoset,orangutan,pig, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000249116.1 ENST00000506335.1 chr5:1884080-1884763 2 423 258 intronic -6.55 0 1,1,1 0 0,0,0 217.342789598109 476.527131782946 41.075 228.297872340426 524.93023255814 77.536 214.489361702128 671.906976744186 129.019 0 0 cat,chimp,cow,dog,guinea_pig,horse,human,macaque,marmoset,panda, antisense antisense A549@0.0102145,AG04450@0,BJ@0,GM12878@0.0157735,H1HESC@0.0058225,HELAS3@0,HEPG2@0,HMEC@0.067441,HSMM@0,HUVEC@0,K562@0,MCF7@0.0404865,NHEK@0.18499,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000249326.1 ENST00000514569.1 chr5:1887446-1900607 4 1631 11524 intergenic 0.46 0 0,1,0 0 0,0,0 0 3.52299548767789 113.004 0 3.6250433877126 299.382 0 10.4579139187782 229.308 1 1 chimp,human,macaque,marmoset,orangutan, lincRNA processed_transcript A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0.025044,HSMM@0,HUVEC@0,K562@0,MCF7@0.0402075,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000248994.1 ENST00000511693.1 chr5:1933977-1959290 2 716 24595 intergenic 0.99 1 0,1,1 0 0,0,0 0 0 0 0 0 0 0 27.880788778207 0 0 0 horse,human,macaque,marmoset,orangutan, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0.0063355,HELAS3@0,HEPG2@0,HMEC@0.102651,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0.0724473,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000248994.1 ENST00000513419.1 chr5:1939886-1959015 2 488 18639 intergenic 1.54 0 0,0,0 0 0,0,0 0 0 0 0 0 0 0 34.7841085895166 37.387 0 1 human,macaque,marmoset,orangutan, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0.0063355,HELAS3@0,HEPG2@0,HMEC@0.102651,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0.0724473,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000248597.1 ENST00000511698.1 chr5:1963723-1967268 3 487 3054 intergenic -0.36 0 0,0,0 0 0,0,0 0 0 0 0 0 0 0 1.90897184020956 0 0 0 chimp,horse,human,macaque,orangutan, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0.142058,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0.139165,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000249731.1 ENST00000514519.1 chr5:1968208-1969127 2 558 359 intergenic 0.67 0 0,1,0 0 0,0,0 0 0 0 0 0 0 0 0 0 0 0 NA lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0.0115537,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000248137.1 ENST00000509745.1 chr5:2831135-2835253 2 558 3558 intergenic 0.37 0 0,0,0 0 0,0,0 0 17.5446880269815 0 0 15.0781337830242 0 0 25.5497470489039 0 0 1 chimp,human,macaque,orangutan, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000248736.1 ENST00000515086.1 chr5:2965120-2967742 2 551 2069 intergenic 4.42 0 0,0,0 0 0,0,0 0 21.829869502175 0 0 46.2508458192363 0 0 54.9289511841469 0 1 1 chimp,human,macaque,marmoset,orangutan, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000249808.1 ENST00000505396.1 chr5:3178209-3181346 2 387 2748 intergenic 0.07 0 0,1,0 0 0,0,0 0 107.789301310044 0 0 127.889010189229 0 0 153.653566229985 0 0 0 chimp,horse,human,macaque,marmoset,orangutan, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0.331737,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000248118.1 ENST00000505443.1 chr5:3417266-3536208 5 3194 115740 intergenic 8.93 1 0,1,1 0 0,0,0 0 18.2219284603421 0 0 21.0985311905996 0 7.06011271133375 30.3240798341109 0 0 1 chimp,human,macaque,orangutan, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0.00091,HELAS3@0,HEPG2@0.000916,HMEC@0.00128,HSMM@0,HUVEC@0,K562@0.003252,MCF7@0.0032135,NHEK@0,NHLF@0,SKNSHRA@0.0016815, 0 0 0 0 ENSG00000249830.1 ENST00000512521.1 chr5:3452930-3461774 3 571 8269 intergenic 3.78 0 0,0,0 0 0,0,0 0 8.57020195912444 0 0.921190893169877 23.9495706856936 0 0.928196147110333 27.1820050792115 0 0 1 chimp,human,macaque,orangutan, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000250716.1 ENST00000508823.1 chr5:3496343-3504118 3 765 7006 intergenic -14.79 0 0,0,0 0 0,0,0 0 0 0 0 1.0012846131887 0 0 0.984870111333143 0 1 1 chimp,human,macaque,marmoset,orangutan, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000248962.1 ENST00000513859.1 chr5:4012822-4013763 2 557 382 intergenic -23.87 0 0,0,0 0 0,0,0 181.692998204668 0 409.31 144.1921005386 13.696335078534 368.049 216.499102333932 25.0157068062827 429.672 0 0 cat,chimp,cow,dog,elephant,horse,human,macaque,marmoset,orangutan,panda, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0.007623,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000249994.1 ENST00000506305.1 chr5:4033826-4041877 3 683 7364 intergenic -3.20 0 0,0,0 0 0,0,0 0 14.2838131450299 0 0 13.278381314503 0 0 20.7516295491581 0 0 0 chimp,dog,horse,human,macaque,marmoset,orangutan, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000250921.1 ENST00000503415.1 chr5:4135795-4143761 2 564 7400 intergenic -2.65 0 0,0,1 0 0,0,0 0 0 0 0 0 0 0 0 0 0 0 chimp,dog,elephant,horse,human,macaque,marmoset,orangutan,panda, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000248973.1 ENST00000507435.1 chr5:4452043-4866334 6 715 413566 intergenic -5.06 0 0,0,0 0 0,0,0 0 13.3835058974867 0 0 13.9777423676028 0 0 18.3047639312709 13.064 0 0 chimp,horse,human,macaque,marmoset,orangutan, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0.004122,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000231291.3 ENST00000503188.1 chr5:4512375-4516889 2 1674 2838 intergenic -3.12 0 0,0,0 0 0,1,0 22.4456391875747 6.81642001409443 0 15.2377538829152 0 12.768 22.0657108721625 8.73960535588443 23.354 0 0 chimp,dog,human,macaque,orangutan, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0.066692,HSMM@0,HUVEC@0,K562@0,MCF7@0.0048525,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000251371.1 ENST00000513925.1 chr5:4640844-4648367 2 538 6983 intergenic 0.48 0 0,0,0 0 0,0,0 16.1338289962825 62.0986681941859 122.283 11.0743494423792 45.9836746384076 11.468 11.0594795539033 61.4751539452957 12.144 0 0 chimp,cow,dog,horse,human,macaque,orangutan,panda, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0.0038075,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000249521.1 ENST00000503757.1 chr5:4773594-4774978 2 799 583 intergenic 2.03 1 0,0,0 0 0,0,0 48.0976220275344 400.608919382504 0 57.0938673341677 449.464837049743 0 63.1351689612015 511.586620926244 0 0 0 cat,chimp,cow,dog,elephant,guinea_pig,horse,human,macaque,marmoset,mouse,orangutan,panda,pig,rabbit,rat, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000248311.1 ENST00000506059.1 chr5:4775589-4805882 2 454 29837 intergenic -4.79 0 0,0,1 0 0,0,0 0 11.9590441398264 0 0 15.9632000536247 0 0 20.6964172001206 0 0 0 chimp,horse,human,macaque,marmoset,orangutan, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000248467.1 ENST00000515656.1 chr5:4831812-4849913 2 293 17806 intergenic -1.07 0 0,0,0 0 0,0,0 0 23.1611816241716 0 0 24.4773671796024 0 0 34.3312366617994 0 0 0 chimp,human,macaque,marmoset,orangutan,panda, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000249941.1 ENST00000505404.1 chr5:4866634-4874872 3 468 7766 intergenic 2.99 0 0,0,0 0 0,0,0 0 0 0 0 0.510172546999742 0 8.71794871794872 1.01133144475921 4.904 0 1 chimp,human,marmoset,orangutan, lincRNA lincRNA A549@0,AG04450@0.0377125,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000251506.1 ENST00000511721.1 chr5:4967877-4970538 3 441 2216 intergenic -1.57 0 0,1,0 0 0,0,0 0 15.9287003610108 0 0 27.6990072202166 5.614 0 32.0270758122744 5.642 0 0 chimp,cow,horse,human,macaque,marmoset,orangutan, lincRNA lincRNA A549@0.012442,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000250481.1 ENST00000509057.1 chr5:4974803-5034380 4 552 59019 intergenic -1.09 0 0,0,0 0 0,0,0 0 1.26100069469154 0 0 1.65421305003473 0 0 2.3765228146868 0 1 1 chimp,human,macaque,marmoset,orangutan, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0.045679, 0 0 0 0 ENSG00000215231.3 ENST00000508201.1 chr5:5034472-5070117 8 1792 33839 intergenic 2.51 1 0,0,0 0 0,1,0 0 1.14666509057596 0 0 1.16752859127043 0 0.72265625 1.77230414610361 0 1 1 chimp,human,macaque,marmoset,orangutan, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000215231.3 ENST00000509382.1 chr5:5034576-5059794 4 585 24627 intergenic -23.75 0 0,0,0 0 0,1,0 0 1.57558776952126 0 0 1.60425549193974 0 0 2.43525398952369 0 0 0 chimp,horse,human,macaque,marmoset,orangutan, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000215231.3 ENST00000507599.1 chr5:5038799-5057986 2 423 18762 intergenic 0 0 0,1,0 0 0,1,0 0 1.58405287282806 0 0 2.10574565611342 0 0 2.86350069288988 0 0 0 chimp,horse,human,macaque,marmoset,orangutan, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000251426.1 ENST00000511514.1 chr5:5046909-5049610 2 543 2156 intergenic 4.12 0 0,0,0 0 0,0,0 0 0 0 0 6.29220779220779 0 0 9.07142857142857 0 0 1 chimp,human,macaque,orangutan, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000251426.1 ENST00000502893.1 chr5:5047093-5047567 2 330 142 intergenic 0 0 0,0,1 0 0,0,0 0 0 0 6.95454545454545 0 11.271 6.84545454545455 0 17.299 0 0 chimp,cow,elephant,horse,human,macaque,marmoset,orangutan, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000215231.3 ENST00000514474.1 chr5:5057844-5067442 3 640 8954 intergenic 2.51 0 0,0,0 0 0,1,0 0 1.01429528702256 6.6 0 0 0 0 0.697788697788698 0 0 0 chimp,cow,horse,human,macaque,marmoset,orangutan,pig, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000250529.1 ENST00000507950.1 chr5:5069305-5078424 2 430 8687 intergenic 5.83 0 0,0,0 0 0,0,0 0 1.01795786807874 0 0 0 0 0 3.26545412685622 0 1 1 chimp,human,macaque,marmoset,orangutan, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0.042428,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000250579.1 ENST00000512155.1 chr5:5132893-5140167 4 885 6383 intergenic 2.65 0 0,1,0 1 0,0,0 0 0 0 0 0 26.436 0 2.91164029453235 30.059 0 1 chimp,human,marmoset,orangutan, antisense antisense A549@0.023568,AG04450@0,BJ@0.0110775,GM12878@0,H1HESC@3.88993,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000250866.1 ENST00000514848.1 chr5:5142251-5176327 2 452 33622 intronic 3.06 0 0,0,0 0 0,0,0 0 2.58580691214086 0 0 3.25081791684016 0 0 5.25435726607578 0 1 1 chimp,human,macaque,marmoset,orangutan, antisense antisense A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000250490.1 ENST00000507444.1 chr5:6310554-6337405 2 2417 24432 intergenic 6.74 0 0,0,0 0 0,1,0 10.4253206454282 5.96868860510806 0 4.24369052544477 6.6617141453831 0 5.91394290442697 8.70710543549443 0 1 1 chimp,human,macaque,marmoset,orangutan, lincRNA lincRNA A549@0.008962,AG04450@0,BJ@0.0040135,GM12878@0.150907,H1HESC@0.117439,HELAS3@0.006059,HEPG2@0.0202385,HMEC@0,HSMM@0.002735,HUVEC@0.013532,K562@0.0010155,MCF7@0,NHEK@0,NHLF@0.0031905,SKNSHRA@0.129011, 0 0 0 0 ENSG00000250490.1 ENST00000502644.1 chr5:6337352-6339997 2 556 2087 intergenic 4.80 0 0,0,0 0 0,1,0 0 0 0 0 0 0 0 0.931480594154288 0 1 1 chimp,human,macaque,marmoset,orangutan, lincRNA lincRNA A549@0.008962,AG04450@0,BJ@0.0040135,GM12878@0.150907,H1HESC@0.117439,HELAS3@0.006059,HEPG2@0.0202385,HMEC@0,HSMM@0.002735,HUVEC@0.013532,K562@0.0010155,MCF7@0,NHEK@0,NHLF@0.0031905,SKNSHRA@0.129011, 0 0 0 0 ENSG00000250056.1 ENST00000507628.1 chr5:6582249-6583836 2 585 1000 intergenic 3.26 0 0,0,0 0 0,0,0 0 0 0 0 0 0 0 0 0 1 1 chimp,human,macaque,marmoset,orangutan, lincRNA retained_intron A549@0.031536,AG04450@0.001062,BJ@0.0407545,GM12878@0,H1HESC@0.364931,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0.0158935,K562@0.0110635,MCF7@0,NHEK@0.00114833,NHLF@0.002604,SKNSHRA@0.451035, 0 0 0 0 ENSG00000250056.1 ENST00000505626.1 chr5:6582251-6588612 5 3031 3322 intergenic 6.09 0 0,0,1 0 0,0,0 0 0 0 0 0 0 0 0 0 0 1 chimp,human,marmoset, lincRNA processed_transcript A549@0.031536,AG04450@0.001062,BJ@0.0407545,GM12878@0,H1HESC@0.364931,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0.0158935,K562@0.0110635,MCF7@0,NHEK@0.00114833,NHLF@0.002604,SKNSHRA@0.451035, 0 0 0 0 ENSG00000250056.1 ENST00000513844.1 chr5:6582259-6586011 2 579 3171 intergenic -4.58 0 0,0,0 0 0,0,0 0 0 0 0 0 0 0 0 0 1 1 chimp,human,macaque,marmoset,orangutan, lincRNA retained_intron A549@0.031536,AG04450@0.001062,BJ@0.0407545,GM12878@0,H1HESC@0.364931,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0.0158935,K562@0.0110635,MCF7@0,NHEK@0.00114833,NHLF@0.002604,SKNSHRA@0.451035, 0 0 0 0 ENSG00000250056.1 ENST00000507582.1 chr5:6583389-6587783 3 2220 2170 intergenic 8.37 1 0,1,1 0 0,0,0 0 0 0 0 0 0 0 0 0 0 1 chimp,human,marmoset, lincRNA retained_intron A549@0.031536,AG04450@0.001062,BJ@0.0407545,GM12878@0,H1HESC@0.364931,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0.0158935,K562@0.0110635,MCF7@0,NHEK@0.00114833,NHLF@0.002604,SKNSHRA@0.451035, 0 0 0 0 ENSG00000248677.1 ENST00000503989.1 chr5:6686438-6707824 3 3361 18021 intergenic 2.08 0 0,0,0 0 0,0,0 0 2.56706065146218 0 0 2.78841351756284 0 0 3.33494256700516 0 1 1 chimp,human,macaque,marmoset,orangutan, lincRNA processed_transcript A549@0.0082715,AG04450@0.0371625,BJ@0.056573,GM12878@0.002068,H1HESC@0.0008835,HELAS3@0.0811235,HEPG2@0.024386,HMEC@0,HSMM@0.017208,HUVEC@0.0300035,K562@0.002336,MCF7@0.028989,NHEK@0.00155667,NHLF@0.0135385,SKNSHRA@0.107378, 0 0 0 0 ENSG00000248677.1 ENST00000514788.1 chr5:6705263-6706385 2 379 741 intergenic 0 0 0,0,0 0 0,0,0 0 0 0 0 0 0 0 0 0 0 1 chimp,human,macaque,orangutan, lincRNA processed_transcript A549@0.0082715,AG04450@0.0371625,BJ@0.056573,GM12878@0.002068,H1HESC@0.0008835,HELAS3@0.0811235,HEPG2@0.024386,HMEC@0,HSMM@0.017208,HUVEC@0.0300035,K562@0.002336,MCF7@0.028989,NHEK@0.00155667,NHLF@0.0135385,SKNSHRA@0.107378, 0 0 0 0 ENSG00000251365.1 ENST00000506093.1 chr5:6766004-6772066 3 593 5465 intergenic -3.03 0 0,1,0 0 0,0,0 0 0 0 9.89038785834739 0 0 17.7065767284992 0 0 0 1 chimp,human,marmoset,orangutan, lincRNA lincRNA A549@0.0529465,AG04450@0.0054105,BJ@0,GM12878@0,H1HESC@0.0577625,HELAS3@0.0298475,HEPG2@0.073228,HMEC@0.01374,HSMM@0.003825,HUVEC@0,K562@0,MCF7@0.061178,NHEK@0.0392247,NHLF@0,SKNSHRA@0.165618, 0 0 0 0 ENSG00000249734.1 ENST00000508881.1 chr5:6795993-6826841 2 550 30296 intergenic 0.96 0 0,0,0 0 0,0,0 0 0.268682334301558 0 0 0.34671243728545 0 0 0.905994190652231 0 0 0 chimp,cow,dog,horse,human,macaque,marmoset,orangutan,pig, lincRNA lincRNA A549@0.0468925,AG04450@0.008533,BJ@0,GM12878@0,H1HESC@0,HELAS3@0.004234,HEPG2@0.019766,HMEC@0,HSMM@0,HUVEC@0.101305,K562@0,MCF7@0.011174,NHEK@0.00925033,NHLF@0,SKNSHRA@0.052569, 0 0 0 0 ENSG00000250060.1 ENST00000510622.1 chr5:6868672-6886900 3 550 17674 intergenic -7.42 0 0,0,0 0 0,0,0 0 0 0 0 1.16063143600769 3.24 0 1.23690166346045 3.336 0 0 chimp,dog,elephant,horse,human, lincRNA lincRNA A549@0.004995,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0.012839,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000250974.1 ENST00000512838.1 chr5:6933783-7190925 6 562 256570 intergenic 1.78 0 0,0,1 0 0,0,0 0 1.90737030829793 0 0 2.23374907432669 0 0 2.78973379584519 2.673 0 0 chimp,horse,human,macaque,marmoset,orangutan, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0.00224733,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000251250.1 ENST00000512746.1 chr5:7326177-7326722 2 330 213 intergenic 0 1 0,0,0 0 0,0,0 0 0 0 0 0 3.156 0 0 3.264 1 1 chimp,human,macaque,marmoset,orangutan, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000251678.1 ENST00000504494.1 chr5:7344692-7346034 2 562 778 intergenic 1.02 0 0,0,0 0 0,0,0 0 0 0 0 0 0 4.75622775800712 0 0 0 0 chimp,cow,human,macaque,marmoset,orangutan,pig,rabbit, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000250668.1 ENST00000514869.1 chr5:7347099-7348090 2 883 106 intergenic -3.03 0 0,1,0 0 0,0,0 0 0 31.79 0 0 17.514 0 0 18.512 0 0 chimp,dog,horse,human,macaque,marmoset,orangutan,panda, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0.005592,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000249638.1 ENST00000504765.1 chr5:7363092-7364644 3 404 1144 intergenic 0.43 0 0,0,0 0 0,0,0 67.8712871287129 81.3986013986014 0 40.789603960396 81.9886363636363 0 39.1089108910891 90.5174825174825 0 0 0 cat,chimp,dog,elephant,guinea_pig,horse,human,macaque,marmoset,orangutan,rabbit, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000249865.1 ENST00000513219.1 chr5:7368042-7373187 3 340 4801 intergenic 1.32 0 0,0,0 0 0,0,0 0 0 0 0 0 0 0 0.902936888148302 0 0 0 cat,chimp,cow,horse,human,macaque,orangutan,panda,pig, antisense antisense A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000223597.2 ENST00000500616.2 chr5:7373230-7379903 2 575 6096 intergenic -1.10 0 0,0,0 0 0,0,0 0 0 0 0 0.398622047244095 0 0 0.800196850393701 0 1 1 chimp,human,macaque,marmoset,orangutan, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000250761.1 ENST00000514105.1 chr5:7707915-7749878 3 518 41441 exonic 3.67 0 0,0,0 0 0,0,0 32.3513513513514 5.71127627229073 0 37.2393822393822 7.31864578557467 2.7 40.6428571428571 9.26278323399532 3.271 0 0 cat,chimp,cow,dog,elephant,guinea_pig,horse,human,macaque,marmoset,mouse,orangutan,panda,pig,rat, antisense antisense A549@0,AG04450@0,BJ@0.0068675,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000251168.1 ENST00000511758.1 chr5:7924405-7925511 3 292 810 intergenic 2.96 0 0,1,0 0 0,0,0 0 0 0 0 0 0 0 0 0 1 1 chimp,human,macaque,marmoset,orangutan, lincRNA lincRNA A549@0,AG04450@0.0109305,BJ@0,GM12878@0.0068335,H1HESC@0,HELAS3@0.021809,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0.0077045, 0 0 0 0 ENSG00000245729.1 ENST00000501071.1 chr5:8333596-8457671 6 1579 122486 intergenic 0.69 1 0,1,1 1 0,0,0 0 0.611637248338586 0 0 1.08286661332724 0 0 1.98310827359861 0 0 0 chimp,cow,human,macaque,marmoset,orangutan, lincRNA processed_transcript A549@0.0042555,AG04450@0,BJ@0,GM12878@0,H1HESC@0.005625,HELAS3@0,HEPG2@0.0129395,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0.0016415,SKNSHRA@0, 0 0 0 0 ENSG00000249159.1 ENST00000512406.1 chr5:8387751-8457677 5 435 69483 intergenic 0 0 0,1,0 1 0,0,0 0 0.878704143459551 0 0 0.530043319948764 0 0 1.73691406531094 0 0 0 chimp,horse,human,macaque,marmoset,orangutan, lincRNA processed_transcript A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0.0051655, 0 0 0 0 ENSG00000247516.2 ENST00000502001.2 chr5:8457606-8460776 2 1003 2165 intergenic 5.45 0 0,0,1 0 0,0,0 0 0 0 0 0 0 0 0 0 0 0 chimp,horse,human,macaque,marmoset,orangutan,rabbit, lincRNA processed_transcript A549@1.27632,AG04450@1.99361,BJ@1.44918,GM12878@0,H1HESC@0.934586,HELAS3@8.01361,HEPG2@1.87295,HMEC@0.635584,HSMM@1.27771,HUVEC@0.623333,K562@5.07351,MCF7@0.687897,NHEK@1.34543,NHLF@0.755394,SKNSHRA@3.77732, 0 0 0 0 ENSG00000249782.1 ENST00000505784.1 chr5:8525291-8528791 2 333 3165 intergenic -5.67 0 0,1,1 0 0,0,0 0 7.28088467614534 0 0 3.57345971563981 0 0 4.99210110584518 0 0 1 chimp,human,macaque,orangutan, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000250198.1 ENST00000510229.1 chr5:8839844-8881352 3 493 41011 intergenic -1.26 0 0,0,0 0 0,0,0 0 0 0 0 0.886664553412499 0 0 1.26424617785472 0 0 1 chimp,human,macaque,marmoset, lincRNA lincRNA A549@0,AG04450@0.003402,BJ@0.0026485,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0.0010095,HMEC@0,HSMM@0,HUVEC@0.003688,K562@0,MCF7@0,NHEK@0,NHLF@0.000714,SKNSHRA@0.024585, 0 0 0 0 ENSG00000250198.1 ENST00000506655.1 chr5:8839871-8842572 1 2701 0 intergenic 4.78 1 0,0,0 0 0,0,0 0 0 0 0 0 0 0 0 0 0 1 chimp,human,orangutan, lincRNA TEC A549@0,AG04450@0.003402,BJ@0.0026485,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0.0010095,HMEC@0,HSMM@0,HUVEC@0.003688,K562@0,MCF7@0,NHEK@0,NHLF@0.000714,SKNSHRA@0.024585, 0 0 0 0 ENSG00000250198.1 ENST00000510067.1 chr5:8839877-8881637 4 1004 40750 intergenic -1.79 0 0,0,0 0 0,0,0 0 0 0 0 0.892343558282209 0 0 1.27234355828221 0 1 1 chimp,human,macaque,marmoset,orangutan, lincRNA lincRNA A549@0,AG04450@0.003402,BJ@0.0026485,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0.0010095,HMEC@0,HSMM@0,HUVEC@0.003688,K562@0,MCF7@0,NHEK@0,NHLF@0.000714,SKNSHRA@0.024585, 0 0 0 0 ENSG00000250619.1 ENST00000506519.1 chr5:9001886-9046052 6 799 43357 exonic 4.78 0 0,0,0 0 0,0,0 0 5.1144682519547 0 0 5.81280992688608 0 0 8.04073160043361 0 0 0 cat,chimp,cow,elephant,human,macaque,marmoset,orangutan,panda,pig, antisense antisense A549@0,AG04450@0.0055685,BJ@0.00804,GM12878@0.0717555,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000248537.1 ENST00000511310.1 chr5:9363387-9422593 4 387 58813 intronic 3.57 0 0,0,0 0 0,0,0 27.8552971576227 6.88021355822692 0 2.56330749354005 9.73755802288609 8.698 23.3178294573643 10.6537500212538 7.214 0 0 cat,chimp,dog,guinea_pig,horse,human,macaque,marmoset,opossum,orangutan,pig, antisense antisense A549@0,AG04450@0,BJ@0.0558655,GM12878@0.023098,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000251370.1 ENST00000510879.1 chr5:9511445-9518198 3 1676 5073 intronic 0.21 0 0,0,0 0 0,0,0 0 12.5994480583481 0 0 6.57520205006899 0 0 7.38971023063276 4.131 0 0 chimp,horse,human,macaque,marmoset,orangutan, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000250001.1 ENST00000515377.1 chr5:9519965-9523290 2 541 2782 intronic 2.79 0 0,0,0 0 0,0,0 0 0 13.34 0 0.60136592379583 0 0 0.611430625449317 0 0 0 cat,chimp,cow,dog,guinea_pig,horse,human,macaque,mouse,orangutan,panda,pig, sense_intronic sense_intronic A549@0,AG04450@0.081716,BJ@0.153699,GM12878@0,H1HESC@0.0629315,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0.00485167,NHLF@0.0042125,SKNSHRA@0.0107565, 0 0 0 0 ENSG00000250786.1 ENST00000508179.1 chr5:9546312-9550721 3 1796 2609 intergenic 3.75 0 0,1,1 1 0,0,0 0 10.341126868532 0 5.73385300668151 17.3315446531238 31.064 7.34743875278396 17.7895745496359 20.364 0 0 chimp,horse,human,macaque,marmoset,orangutan, lincRNA lincRNA A549@0.0017255,AG04450@5.47365,BJ@10.0684,GM12878@0.002456,H1HESC@1.67753,HELAS3@0,HEPG2@0,HMEC@1.67313,HSMM@0.124027,HUVEC@0.0791335,K562@0.0066505,MCF7@1.17403,NHEK@0.864285,NHLF@3.47658,SKNSHRA@0.270614, 0 0 0 0 ENSG00000250786.1 ENST00000509788.1 chr5:9546402-9549702 2 840 2458 intergenic -6.77 0 0,1,0 1 0,0,0 0 10.9764035801465 0 6.42619047619048 18.3962571196094 31.064 6.18928571428571 18.8824247355574 21.579 0 0 cat,chimp,cow,guinea_pig,horse,human,macaque,marmoset,orangutan,panda, lincRNA lincRNA A549@0.0017255,AG04450@5.47365,BJ@10.0684,GM12878@0.002456,H1HESC@1.67753,HELAS3@0,HEPG2@0,HMEC@1.67313,HSMM@0.124027,HUVEC@0.0791335,K562@0.0066505,MCF7@1.17403,NHEK@0.864285,NHLF@3.47658,SKNSHRA@0.270614, 0 0 0 0 ENSG00000248525.1 ENST00000504182.1 chr5:9621489-9623718 2 387 1840 intergenic 0 0 0,0,0 0 0,0,0 0 16.45 0 18.4496124031008 1.10869565217391 0 18.031007751938 1.9445652173913 0 0 0 chimp,cow,horse,human,macaque,orangutan, lincRNA lincRNA A549@0,AG04450@0,BJ@0.0091975,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000249781.1 ENST00000512976.1 chr5:9641417-9658905 4 460 17022 intergenic -5.70 0 0,0,0 0 0,0,0 49.7391304347826 17.6759487721772 0 72.4239130434783 106.662789331453 9.579 84.4695652173913 107.463752790506 13.126 0 0 cat,chimp,cow,dog,elephant,horse,human,macaque,marmoset,mouse,opossum,orangutan,panda,rabbit, processed_transcript processed_transcript A549@0.004781,AG04450@0.013539,BJ@0.061921,GM12878@0.001224,H1HESC@0.0079365,HELAS3@0,HEPG2@0.0051815,HMEC@0,HSMM@0,HUVEC@0,K562@0.0074055,MCF7@0,NHEK@0.001751,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000249781.1 ENST00000511616.1 chr5:9641427-9903938 13 1834 260653 intergenic 7.46 1 0,0,0 0 0,0,0 12.4754634678299 7.25009879034579 0 13.1543075245365 36.9717095141817 0 13.2666303162486 38.0315591993954 0 0 0 dog,human,macaque, processed_transcript processed_transcript A549@0.004781,AG04450@0.013539,BJ@0.061921,GM12878@0.001224,H1HESC@0.0079365,HELAS3@0,HEPG2@0.0051815,HMEC@0,HSMM@0,HUVEC@0,K562@0.0074055,MCF7@0,NHEK@0.001751,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000250814.1 ENST00000508097.1 chr5:9854489-9890049 2 497 35061 intergenic 0 0 0,0,0 0 0,0,0 0 4.13884372950001 0 0 7.83029577022903 0 0 8.63418042839623 0 0 0 chimp,horse,human,marmoset,orangutan,pig, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000249807.1 ENST00000506299.1 chr5:10137250-10138477 2 941 284 intergenic -2.34 0 0,1,1 0 0,0,0 0 0 0 0 0 0 0 0 0 0 1 chimp,human,marmoset,orangutan, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000248968.1 ENST00000509915.1 chr5:10248437-10250027 2 686 902 exonic -0.26 0 0,0,1 0 0,0,0 0 0 0 10.9956268221574 0 0 12.3717201166181 0 0 0 0 chimp,horse,human,macaque,orangutan, antisense antisense A549@0,AG04450@0,BJ@0.007157,GM12878@0,H1HESC@0,HELAS3@0.01543,HEPG2@0.0348335,HMEC@0,HSMM@0,HUVEC@0,K562@0.0297355,MCF7@0,NHEK@0.0198213,NHLF@0.002836,SKNSHRA@0, 0 0 0 0 ENSG00000250600.1 ENST00000513037.1 chr5:10441402-10441904 2 187 313 exonic 0 0 0,1,0 0 0,0,0 0 0 55.238 0 0 88.223 0 0 79 1 1 chimp,human,macaque,marmoset,orangutan, antisense antisense A549@0.0344545,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0.032636,NHEK@0,NHLF@0,SKNSHRA@0.036055, 0 0 0 0 ENSG00000246016.2 ENST00000416930.2 chr5:10479483-10482421 2 481 2455 intergenic -7.47 0 0,0,1 0 0,0,0 0 0 0 0 3.26272912423625 0 0 3.30997963340122 0 0 1 chimp,human,orangutan, antisense antisense A549@0.123498,AG04450@0.0195035,BJ@0.0302355,GM12878@0,H1HESC@0.0102465,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0.00852,HUVEC@0.010068,K562@0.02034,MCF7@0.0168385,NHEK@0.00272733,NHLF@0.0079895,SKNSHRA@0.009395, 2 44 0 0 ENSG00000249166.1 ENST00000510562.1 chr5:10493403-10494206 2 413 388 intergenic 1.81 0 0,0,1 0 0,0,0 0 0 0 0 0 0 0 0 0 1 1 chimp,human,macaque,marmoset,orangutan, lincRNA lincRNA A549@1.54355,AG04450@0,BJ@0.0059325,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0.192965,HMEC@0,HSMM@0,HUVEC@0,K562@0.009202,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000249396.1 ENST00000515243.1 chr5:10493639-10502840 3 2127 7070 intergenic 0.32 0 1,1,1 0 0,0,0 0 0 0 0 0 0 0 0 0 1 1 chimp,human,macaque,marmoset,orangutan, lincRNA lincRNA A549@0.240716,AG04450@0.0010525,BJ@0.001136,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0.027415,HMEC@0,HSMM@0,HUVEC@0,K562@0.049676,MCF7@0,NHEK@0,NHLF@0.001812,SKNSHRA@0, 0 0 0 0 ENSG00000250841.1 ENST00000506792.1 chr5:10594938-10596322 2 730 652 intronic -4.27 0 0,0,0 0 0,0,0 0 0 0 0 0 0 0 0 0 0 0 chimp,horse,human,macaque,marmoset,panda,pig, sense_intronic sense_intronic A549@0.28179,AG04450@0.20816,BJ@0.012891,GM12878@0.882309,H1HESC@0.0501565,HELAS3@0.045431,HEPG2@0.0576345,HMEC@0,HSMM@0,HUVEC@0.226746,K562@0.0023575,MCF7@0.002615,NHEK@0.00256467,NHLF@0,SKNSHRA@0.0173665, 0 0 0 0 ENSG00000250106.1 ENST00000506304.1 chr5:10627372-10628337 2 520 443 intronic 0 0 0,1,1 0 0,0,0 0 0 0 8.80384615384615 0 0 9.98846153846154 0 0 0 0 cat,chimp,human,macaque,marmoset,orangutan,panda,pig, antisense antisense A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0.005693,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000250576.1 ENST00000503953.1 chr5:10775170-10777174 2 340 1662 intergenic -7.61 0 0,1,0 0 0,0,0 0 0 0 0 1.49217809867629 0 0 1.51022864019254 0 0 0 chimp,elephant,guinea_pig,human,macaque,marmoset,orangutan,pig, lincRNA lincRNA A549@0,AG04450@0.0137725,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0.00623,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000248783.1 ENST00000502209.2 chr5:12554002-12574749 3 369 20374 intergenic 7.34 0 0,1,0 1 0,0,0 0 0 0 0 0.626092078138804 0 0 1.05978207519387 0 0 1 chimp,human,orangutan, lincRNA lincRNA A549@0.01485,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0.763077,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0.123978, 0 0 0 0 ENSG00000248131.1 ENST00000505877.1 chr5:12574969-12655799 3 1316 79510 intergenic -10.81 0 1,1,1 1 0,0,0 0 0 0 0 1.00725694881147 0 0 3.31774619544711 0 0 0 chimp,guinea_pig,horse,human,macaque,marmoset,orangutan,panda, lincRNA processed_transcript A549@0.0381825,AG04450@0,BJ@0,GM12878@0.003554,H1HESC@0.0766185,HELAS3@0.0138975,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0.004049,K562@5.00766,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0.288508, 0 0 0 0 ENSG00000248131.1 ENST00000513051.1 chr5:12574969-12759760 4 666 184119 intergenic 0.02 0 1,1,1 1 0,0,0 0 0.248008081729751 0 0 1.09560121443197 0 0 2.82000771240339 0 0 0 cat,chimp,cow,dog,human,macaque,orangutan,pig,rabbit, lincRNA processed_transcript A549@0.0381825,AG04450@0,BJ@0,GM12878@0.003554,H1HESC@0.0766185,HELAS3@0.0138975,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0.004049,K562@5.00766,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0.288508, 0 0 0 0 ENSG00000248131.1 ENST00000505196.1 chr5:12574969-12804475 4 536 228964 intergenic 0.02 0 0,1,0 1 0,0,0 0 0.303270383116997 0 0 1.24059240754005 0 0 2.96040425569085 0 0 1 human,marmoset, lincRNA processed_transcript A549@0.0381825,AG04450@0,BJ@0,GM12878@0.003554,H1HESC@0.0766185,HELAS3@0.0138975,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0.004049,K562@5.00766,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0.288508, 0 0 0 0 ENSG00000248457.1 ENST00000510065.1 chr5:12914180-13032998 3 267 118547 intergenic 0 0 0,0,0 0 0,0,0 0 0.46934127392511 0 0 2.14983086876935 0 0 2.54478814309936 0 1 1 chimp,human,macaque,marmoset,orangutan, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0.017363,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000248145.1 ENST00000513283.1 chr5:13175958-13179684 2 247 3477 intergenic -2.30 0 0,0,0 0 0,0,0 117.437246963563 0 0 174.842105263158 5.82398619499569 0 168.550607287449 5.63761863675582 0 0 0 chimp,elephant,human,macaque,marmoset,mouse,orangutan,rabbit, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000251423.1 ENST00000503244.1 chr5:13860447-13897880 3 609 36820 intronic -4.35 0 0,0,0 0 0,0,0 0 15.8223248234655 58.24 0 25.202525801195 77.818 0 30.596360673547 90.611 0 0 chimp,dog,horse,human,macaque,marmoset,orangutan,panda,pig,rabbit, antisense antisense A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000249556.1 ENST00000515374.1 chr5:14651755-14653492 2 1674 61 intergenic 15.24 0 1,1,1 0 0,0,0 0 0 0 395.673835125448 0 2.67 813.936678614098 871 1.79 0 0 cat,chimp,cow,dog,elephant,guinea_pig,horse,human,macaque,marmoset,mouse,opossum,orangutan,panda,pig,platypus,rabbit,rat, lincRNA lincRNA A549@0.472136,AG04450@0.432955,BJ@0.606414,GM12878@0.362148,H1HESC@0.270315,HELAS3@0.104556,HEPG2@0.101396,HMEC@0.064863,HSMM@0.0569675,HUVEC@0.181237,K562@0.28405,MCF7@0.0486015,NHEK@0.17894,NHLF@0.050948,SKNSHRA@0.307477, 0 0 0 0 ENSG00000249332.1 ENST00000502680.1 chr5:15112486-15117116 3 819 3807 intergenic 4.21 0 0,0,0 0 0,0,0 0 0 60.882 0 0 56.32 9.43711843711844 2.40583136327817 71.697 0 0 chimp,cow,horse,human,macaque,marmoset,orangutan, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000248486.1 ENST00000511443.1 chr5:15192248-15266650 3 555 73843 intergenic 2.74 0 0,0,1 0 0,0,0 34.7315315315315 11.2334412198854 0 9.37477477477477 13.5973348861774 0 7.43963963963964 23.6370678331054 0 0 0 chimp,cow,elephant,guinea_pig,horse,human,macaque,marmoset,orangutan,pig, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000250250.1 ENST00000510456.1 chr5:15602298-15607457 2 358 4799 intronic -6.90 0 0,0,0 0 0,0,0 0 0 0 0 0.383413211085643 0 0 0.491769118566368 0 0 0 chimp,horse,human,macaque,orangutan,rabbit, antisense antisense A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000250250.1 ENST00000509228.1 chr5:15606869-15607358 2 360 127 intronic 0 0 0,0,0 0 0,0,0 0 0 0 5.11111111111111 0 0 6.55555555555556 0 0 0 0 cat,chimp,cow,elephant,guinea_pig,horse,human,macaque,marmoset,orangutan,panda,rabbit, antisense antisense A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000250981.1 ENST00000502834.1 chr5:16129287-16141711 2 706 11716 intronic -2.61 0 0,0,0 0 0,0,0 0 0 0 0 0.691618299761011 8.478 0 1.03559235233868 8.343 0 0 chimp,elephant,horse,human,macaque,marmoset,orangutan,pig, antisense antisense A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0.0028395,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000250448.1 ENST00000509037.1 chr5:16180347-16185694 2 2064 3281 intergenic 1.80 0 0,1,0 0 0,0,0 0 5.68576653459311 17.476 0 13.6750990551661 96.395 0 14.5873209387382 116.403 0 0 chimp,dog,guinea_pig,horse,human,marmoset,orangutan,panda,rabbit, lincRNA processed_transcript A549@0.003265,AG04450@0,BJ@0,GM12878@0,H1HESC@0.0050205,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0.151851, 0 0 0 0 ENSG00000248150.1 ENST00000513157.1 chr5:16373470-16440190 8 2112 64594 intergenic 4.51 0 0,0,0 0 0,0,0 0 8.85419698424002 0 0 8.98115924079636 0 0 10.5602223116698 0 0 1 chimp,human,macaque,orangutan, lincRNA lincRNA A549@0.0255245,AG04450@0.012168,BJ@0.015179,GM12878@0.010655,H1HESC@0.0762785,HELAS3@0.049943,HEPG2@0.038037,HMEC@0,HSMM@0.005062,HUVEC@0.001404,K562@0.0438915,MCF7@0.0048355,NHEK@0.03445,NHLF@0,SKNSHRA@0.005161, 0 0 0 0 ENSG00000249737.1 ENST00000513041.1 chr5:16428645-16432545 3 455 3441 intergenic -12.44 0 0,0,0 0 0,0,0 15.7692307692308 18.211275791921 67.076 14.7956043956044 18.3876780005812 53.194 14.4593406593407 20.2162162162162 49.946 0 0 cat,chimp,horse,human,macaque,marmoset,orangutan,panda,rabbit, antisense antisense A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000246214.1 ENST00000499131.1 chr5:16616035-16630078 4 1670 12367 intronic 6.49 0 0,0,0 0 0,0,0 0 5.70227217595213 0 9.58922155688623 8.91161963289399 2.7 9.08323353293413 10.4753780221557 2.59 1 1 chimp,human,macaque,marmoset,orangutan, lincRNA processed_transcript A549@0,AG04450@0,BJ@0,GM12878@0.0016785,H1HESC@0.006435,HELAS3@0,HEPG2@0,HMEC@0.002446,HSMM@0,HUVEC@0,K562@0,MCF7@0.0048585,NHEK@0.003891,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000250415.1 ENST00000504935.1 chr5:16617334-16621385 4 700 3345 intergenic -1.75 0 0,1,1 0 0,0,0 0 0 70.52 0 0.667264573991031 104.12 0 2.39162929745889 115.968 0 0 chimp,horse,human,macaque,marmoset,orangutan, antisense antisense A549@0,AG04450@0,BJ@0,GM12878@0.001736,H1HESC@0.0042215,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0.0034885,MCF7@0.008721,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000215196.3 ENST00000399760.2 chr5:17130137-17217156 3 2938 84077 intergenic 16.34 0 0,0,0 1 0,0,0 5.50204220558203 2.55263627389179 81.702 3.74063989108237 3.64509913531643 166.687 4.55616065350579 8.70448517430451 162.137 0 0 human, lincRNA processed_transcript A549@1.04078,AG04450@0.0300355,BJ@0.0150305,GM12878@0.024802,H1HESC@0.228897,HELAS3@1.50703,HEPG2@0.384346,HMEC@0.001392,HSMM@0.003025,HUVEC@0.001021,K562@0,MCF7@0.0751275,NHEK@0.030214,NHLF@0.01359,SKNSHRA@0.024788, 0 0 0 0 ENSG00000215196.3 ENST00000538380.1 chr5:17169365-17217508 4 2377 45760 intergenic 16.34 0 0,1,0 0 0,0,0 43.140092553639 2.8024256993007 81.702 42.6184265881363 3.31761363636364 181.131 49.824989482541 11.6303103146853 172.967 0 1 human,marmoset, lincRNA processed_transcript A549@1.04078,AG04450@0.0300355,BJ@0.0150305,GM12878@0.024802,H1HESC@0.228897,HELAS3@1.50703,HEPG2@0.384346,HMEC@0.001392,HSMM@0.003025,HUVEC@0.001021,K562@0,MCF7@0.0751275,NHEK@0.030214,NHLF@0.01359,SKNSHRA@0.024788, 0 0 0 0 ENSG00000248223.1 ENST00000511821.1 chr5:17354019-17355008 2 865 122 intergenic 7.68 0 0,0,0 0 0,0,0 112.293641618497 383 75.451 231.582658959538 525 42.987 344.705202312139 747 70.601 0 0 chimp,cow,dog,elephant,guinea_pig,horse,human,macaque,marmoset,opossum,orangutan,pig,rabbit, lincRNA lincRNA A549@0.068406,AG04450@0.0206265,BJ@0,GM12878@0,H1HESC@0,HELAS3@0.17698,HEPG2@0.0251695,HMEC@0,HSMM@0.06151,HUVEC@0.0058845,K562@0.006176,MCF7@0.002319,NHEK@0.00599,NHLF@0.004451,SKNSHRA@0, 0 0 0 0 ENSG00000249199.1 ENST00000511182.1 chr5:17369334-17375686 2 283 6067 intergenic 0 0 0,1,0 0 0,0,0 0 0 0 0 0.875061809790671 0 0 2.77138618757211 0 0 0 chimp,horse,human,macaque, lincRNA lincRNA A549@4.78343,AG04450@0.052232,BJ@0.008491,GM12878@0,H1HESC@0.0319225,HELAS3@0.308208,HEPG2@0.038284,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0.021483,NHEK@0,NHLF@0,SKNSHRA@0.0079745, 0 0 0 0 ENSG00000250822.1 ENST00000505158.1 chr5:17379015-17387419 3 2309 6091 intergenic 1.27 0 0,0,0 0 0,0,0 28.4239930705933 5.68954194713512 0 32.1156344737982 6.73649647020194 0 32.1857947163274 6.86652438023313 0 0 1 chimp,human,macaque,orangutan, lincRNA lincRNA A549@0,AG04450@0.0137185,BJ@0,GM12878@0,H1HESC@0,HELAS3@0.0019545,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000248455.1 ENST00000508677.1 chr5:17404128-17441803 2 294 37379 intergenic -2.26 1 0,0,1 0 0,0,0 0 5.46710719922951 0 0 7.43749163969073 0 0 8.05123197517323 5.522 0 0 cat,chimp,dog,elephant,guinea_pig,horse,human,macaque,marmoset,orangutan,panda,pig, lincRNA lincRNA A549@0.007333,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000248455.1 ENST00000507730.1 chr5:17404255-17441787 2 414 37116 intergenic 0 1 0,0,1 0 0,0,0 0 5.50584653518698 0 0 7.49019290871861 0 0 8.10828214247225 0 0 0 chimp,elephant,human,macaque,marmoset,orangutan,panda,pig, lincRNA lincRNA A549@0.007333,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000248455.1 ENST00000505844.1 chr5:17436846-17441787 2 685 4254 intergenic -1.75 1 0,0,1 0 0,0,0 163.182481751825 0 0 108.013138686131 3.83309826046074 0 95.5094890510949 4.21203573107663 0 0 0 chimp,cow,dog,elephant,horse,human,macaque,marmoset,mouse,orangutan,panda,pig,rabbit,rat, lincRNA lincRNA A549@0.007333,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000249662.1 ENST00000503267.1 chr5:17444119-17446039 2 527 1391 intergenic 3.19 0 0,0,0 0 0,0,0 0 0 0 0 24.1459381739756 0 5.07210626185958 27.6937455068296 0 0 0 chimp,dog,horse,human,macaque,marmoset,orangutan, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000249662.1 ENST00000504998.1 chr5:17444119-17484055 3 579 39353 intergenic 0.37 0 0,0,0 0 0,0,0 0 0.76538002185348 0 0 3.64292430056158 0 4.61658031088083 17.7615683683582 0 0 0 chimp,horse,human,macaque,marmoset,orangutan, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000249937.1 ENST00000511596.1 chr5:17684693-17955966 5 573 270692 intergenic 0.81 1 0,0,0 0 0,0,0 0 3.61666395756062 0 0 5.16642530994636 1.38 0 6.67552051778405 4.721 0 1 chimp,human,macaque,orangutan, lincRNA lincRNA A549@0.0120355,AG04450@0,BJ@0,GM12878@0.0030015,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0.00337333,NHLF@0.0024705,SKNSHRA@0, 0 0 0 0 ENSG00000249937.1 ENST00000514771.1 chr5:17850368-17929745 6 775 78592 intergenic 1.36 1 0,0,0 0 0,0,0 56.9612903225806 2.29732033794788 0 32.341935483871 3.41861767100977 0 31.7522580645161 6.41943200325733 0 0 0 chimp,guinea_pig,horse,human,macaque,marmoset,orangutan, lincRNA lincRNA A549@0.0120355,AG04450@0,BJ@0,GM12878@0.0030015,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0.00337333,NHLF@0.0024705,SKNSHRA@0, 0 0 0 0 ENSG00000249937.1 ENST00000510648.1 chr5:17919337-17955946 4 455 36148 intergenic 0.81 1 0,0,0 0 0,0,0 0 4.79642027221423 0 0 3.7945944450592 0 0 4.64946885028217 0 0 1 chimp,human,macaque,orangutan, lincRNA lincRNA A549@0.0120355,AG04450@0,BJ@0,GM12878@0.0030015,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0.00337333,NHLF@0.0024705,SKNSHRA@0, 0 0 0 0 ENSG00000248693.1 ENST00000512978.1 chr5:18704542-18746282 2 236 41502 intergenic 0.68 0 0,1,1 0 0,0,0 0 2.17040142643728 0 0 3.29993735241675 0 0 4.17093152137246 0 0 1 chimp,human, lincRNA lincRNA A549@0.029846,AG04450@0,BJ@0.0450995,GM12878@4.86623,H1HESC@0,HELAS3@1.58375,HEPG2@0.670345,HMEC@0,HSMM@0.035514,HUVEC@0,K562@0.281021,MCF7@0.380579,NHEK@0,NHLF@0,SKNSHRA@0.231953, 0 0 0 0 ENSG00000249174.1 ENST00000504827.1 chr5:18965970-19142455 2 658 175825 intergenic 0.05 0 0,1,0 1 0,0,0 0 3.2081103369828 0 0 3.04363998293758 0 0 4.34195933456562 0 0 0 NA lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0.014367,HEPG2@0.004251,HMEC@0,HSMM@0,HUVEC@0.012138,K562@0.7328,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000251487.1 ENST00000513955.1 chr5:19035306-19038849 2 896 2645 intergenic -3.85 0 0,0,1 0 0,0,0 0 12.5981096408318 0 0 17.3625708884688 0 0 21.8945179584121 0 1 1 chimp,human,macaque,marmoset,orangutan, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0.0017215,HMEC@0,HSMM@0,HUVEC@0,K562@2.35041,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0.00929, 0 0 0 0 ENSG00000251487.1 ENST00000515123.1 chr5:19036015-19038908 3 445 2444 intergenic -2.82 0 0,0,0 0 0,0,0 0 13.6342062193126 0 0 18.7905073649755 0 0 23.6951718494272 0 0 0 chimp,horse,human,macaque,marmoset,orangutan,pig, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0.0017215,HMEC@0,HSMM@0,HUVEC@0,K562@2.35041,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0.00929, 0 0 0 0 ENSG00000249854.1 ENST00000513573.1 chr5:20305674-20331565 2 422 25467 intronic 0 0 0,1,0 0 0,0,0 0 1.98480386382377 0 0 3.37122550751954 0 0 4.52122354419445 400.367 0 0 chimp,cow,human, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000251629.2 ENST00000502427.1 chr5:20611949-20937800 12 1675 324154 intergenic 1.10 0 0,0,1 0 0,0,0 0 2.92961061717579 54.264 0 4.25208080110071 89.608 74.5617910447761 82.3935567662284 88.285 1 1 chimp,human,macaque,marmoset,orangutan, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0.0041685,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0.111111,MCF7@0,NHEK@0.000781,NHLF@0,SKNSHRA@0.385804, 0 0 0 0 ENSG00000251629.2 ENST00000514876.1 chr5:20611959-20879567 5 412 267188 intergenic -5.62 0 0,0,0 0 0,0,0 0 3.17368669251613 50.274 0 4.49272048145875 84.068 32.0776699029126 11.9567495546207 82.835 1 1 chimp,human,macaque,marmoset,orangutan, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0.0041685,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0.111111,MCF7@0,NHEK@0.000781,NHLF@0,SKNSHRA@0.385804, 0 0 0 0 ENSG00000249490.1 ENST00000504244.1 chr5:20612734-20614874 2 507 1631 intergenic -0.87 0 0,0,0 0 0,0,0 0 0 0 0 0 0 0 0 0 0 1 chimp,human,macaque,orangutan, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000251629.2 ENST00000512688.1 chr5:20616514-20935145 6 461 318160 intergenic -5.11 0 0,1,1 1 0,0,0 0 2.7676797837566 0 0 4.07028539099824 0 130.245119305857 83.875936635655 0 1 1 chimp,human,macaque,marmoset,orangutan, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0.0041685,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0.111111,MCF7@0,NHEK@0.000781,NHLF@0,SKNSHRA@0.385804, 0 0 0 0 ENSG00000249359.1 ENST00000503488.1 chr5:21323945-21341484 3 5488 12047 intergenic 4.02 0 0,1,0 0 0,0,0 0 0.931352203868183 0 5.21155247813411 0 0 27.2295918367347 430.385656179962 646.914 1 1 chimp,human,macaque,marmoset,orangutan, lincRNA lincRNA A549@0.049966,AG04450@0.0044315,BJ@0.0024815,GM12878@0.0032955,H1HESC@0.00212,HELAS3@0.000909,HEPG2@0,HMEC@0,HSMM@0.0007495,HUVEC@0,K562@0.0662625,MCF7@0.001856,NHEK@0.00216067,NHLF@0.0007105,SKNSHRA@0.037228, 0 0 0 0 ENSG00000253766.1 ENST00000522350.1 chr5:21616371-21779631 4 848 162406 intronic 2.60 1 0,1,1 0 0,0,0 0 5.26356169107053 0 16.6804245283019 7.35916776473776 0 22.9622641509434 8.56574264497618 0 0 0 chimp,human,macaque,pig, antisense antisense A549@0,AG04450@0,BJ@0,GM12878@0.007098,H1HESC@0,HELAS3@0,HEPG2@0.006403,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0.26926,NHLF@0,SKNSHRA@0.0026675, 0 0 0 0 ENSG00000253104.1 ENST00000524042.1 chr5:22139356-22141577 3 498 1719 intronic 0.40 0 0,0,0 0 0,0,0 55.8935742971888 84.8848167539267 0 67.9457831325301 92.6631762652705 0 73.3855421686747 85.3414776032577 16.815 0 0 cat,chimp,cow,elephant,guinea_pig,horse,human,macaque,marmoset,mouse,orangutan,panda,pig, sense_intronic sense_intronic A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000249404.1 ENST00000507674.1 chr5:23013157-23014636 2 438 1039 intergenic -5.24 0 0,1,0 0 0,0,0 93.6803652968036 166.128970163619 0 140.086757990868 163.551491819057 2.04 192.744292237443 150.23676612127 2.224 0 0 chimp,cow,dog,elephant,guinea_pig,horse,human,macaque,marmoset,mouse,opossum,orangutan,panda,pig,rabbit,rat, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0.021247,HEPG2@0.0371965,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000250694.1 ENST00000507526.1 chr5:24352418-24353552 2 485 647 intergenic -5.45 0 0,0,0 0 0,0,0 0 0 79.401 0 0 134.775 0 0 129.464 0 0 chimp,cow,horse,human,macaque,marmoset,orangutan,panda, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000251294.1 ENST00000510391.1 chr5:24554127-24613331 3 1788 57412 intronic 0.40 0 0,1,0 0 0,0,0 0 8.86462760398523 0 0 11.4645196126245 0 0 11.833536542883 0 0 0 chimp,cow,dog,elephant,guinea_pig,horse,human,macaque,marmoset,orangutan,panda,pig,rabbit, antisense antisense A549@0.007272,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0.003828,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000248908.1 ENST00000504339.1 chr5:24835389-24840692 3 2287 3012 intergenic -0.84 0 0,0,0 0 0,0,0 0 41.7184594953519 0 0.731526016615654 52.031208499336 0 1.0192391779624 57.0544488711819 0 0 0 chimp,horse,human,macaque,marmoset,orangutan, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000250524.1 ENST00000502861.1 chr5:24882052-24885570 2 570 2946 intergenic -1.14 0 0,0,0 0 0,0,0 0 42.9871011541073 0 0 50.16361167685 0 0 50.3346911065852 0 0 0 chimp,horse,human,macaque,marmoset,orangutan,rabbit, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000251273.1 ENST00000507600.1 chr5:25126414-25190765 5 529 63814 intergenic 1.55 0 0,1,0 0 0,0,0 0 4.15885228946626 0 0 7.43496724856615 0 0 7.82232738897421 0 1 1 chimp,human,macaque,marmoset,orangutan, lincRNA lincRNA A549@1.02893,AG04450@2.02321,BJ@1.38323,GM12878@0.463307,H1HESC@3.85886,HELAS3@3.05102,HEPG2@3.80567,HMEC@3.57321,HSMM@9.00569,HUVEC@4.35297,K562@1.78214,MCF7@2.5367,NHEK@1.22424,NHLF@3.50455,SKNSHRA@2.80787, 0 0 0 0 ENSG00000245662.2 ENST00000502100.2 chr5:25190791-25306281 5 932 114550 intergenic -3.89 0 0,0,0 0 0,0,0 0 2.30263640331733 35.723 0 6.42109995635094 45.283 0 7.7706329113924 46.123 1 1 chimp,human,macaque,marmoset,orangutan, lincRNA lincRNA A549@0.007581,AG04450@0,BJ@0.0763365,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0.0116905,HUVEC@0,K562@0.0078635,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000251654.2 ENST00000505040.2 chr5:25219082-25298721 5 553 79078 intergenic 0.84 0 0,0,0 0 0,0,0 0 2.9201927211108 0 0 7.97850223829637 0 0 8.5245327398265 0 0 0 chimp,horse,human,macaque,marmoset,orangutan, lincRNA lincRNA A549@0.005563,AG04450@0,BJ@0,GM12878@0,H1HESC@0.059747,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000248605.1 ENST00000511029.1 chr5:25404842-25422964 3 562 17556 intergenic 0.12 0 0,0,0 0 0,0,0 112.035587188612 1.77033492822966 0 143.731316725979 0.199362041467305 0 161.683274021352 1.25131009341536 0 0 0 chimp,dog,elephant,guinea_pig,human,macaque,marmoset,mouse,orangutan,rabbit,rat, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@2.9142,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0.007622,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000248605.1 ENST00000507887.1 chr5:25413548-25446034 3 635 31847 intergenic 0.12 0 0,0,0 0 0,0,0 0 2.16755110371464 0 0 1.35802430370208 59.404 0 1.74575313216315 104.459 1 1 chimp,human,macaque,marmoset,orangutan, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@2.9142,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0.007622,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000248605.1 ENST00000507926.1 chr5:25415755-25446016 3 366 29891 intergenic 1.26 0 0,0,1 0 0,0,0 0 1.26961292696798 0 0 1.3297982670369 59.404 0 1.6521360944766 104.459 0 1 chimp,human,macaque,marmoset, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@2.9142,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0.007622,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000249099.1 ENST00000512939.1 chr5:26382628-26399928 5 482 16810 intergenic -1.15 0 0,1,0 0 0,0,0 79.396265560166 11.3612730517549 0 57.3796680497925 273.989411064842 0 53.5892116182573 256.88750743605 0 0 0 chimp,elephant,human,macaque,marmoset,orangutan, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000251033.1 ENST00000506032.1 chr5:26711660-26750106 3 682 37760 intergenic -2.28 0 0,1,0 0 0,0,0 0 6.96808792372881 12.189 0 8.33943326271186 57.405 0 16.9764036016949 58.179 0 0 chimp,dog,elephant,horse,human,macaque,marmoset,orangutan,panda,pig, processed_transcript processed_transcript A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000248490.1 ENST00000510512.1 chr5:27412720-27436518 4 487 23305 intergenic -2.03 0 0,0,0 0 0,0,0 0 2.66938425230637 0 0 1.00163055138382 0 0 13.4687406136022 0 1 1 chimp,human,macaque,marmoset,orangutan, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0.0088625,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000250337.1 ENST00000512067.1 chr5:27472399-27486253 3 1607 12243 intergenic -0.78 1 1,1,1 0 0,0,0 0 0 0 1.54324828873678 0.22911051212938 0 1.61169881767268 3.92608020909908 0 0 0 cat,chimp,cow,dog,guinea_pig,horse,human,macaque,marmoset,orangutan,panda,pig,rabbit, lincRNA processed_transcript A549@11.2929,AG04450@0.360992,BJ@0.288353,GM12878@9.42486,H1HESC@6.59502,HELAS3@12.6848,HEPG2@10.5779,HMEC@0.004328,HSMM@0.0325585,HUVEC@0.011614,K562@1.16487,MCF7@0.376271,NHEK@0.0242267,NHLF@0.022836,SKNSHRA@1.10013, 0 0 0 0 ENSG00000250337.1 ENST00000510165.1 chr5:27472399-27496508 5 1101 23000 intergenic 2.57 1 1,1,1 0 0,0,0 0 0.267826086956522 0 23.2970027247956 4.59247826086956 0 21.1653042688465 6.61160869565217 0 1 1 chimp,human,macaque,marmoset,orangutan, lincRNA processed_transcript A549@11.2929,AG04450@0.360992,BJ@0.288353,GM12878@9.42486,H1HESC@6.59502,HELAS3@12.6848,HEPG2@10.5779,HMEC@0.004328,HSMM@0.0325585,HUVEC@0.011614,K562@1.16487,MCF7@0.376271,NHEK@0.0242267,NHLF@0.022836,SKNSHRA@1.10013, 0 0 0 0 ENSG00000250337.1 ENST00000503107.1 chr5:27472414-27494425 3 455 21552 intergenic -5.79 0 0,1,0 0 0,0,0 0 0.285820341499629 0 44.8351648351648 4.4659428359317 0 40.3692307692308 6.60792501855976 0 0 0 human,macaque,marmoset,orangutan,pig, lincRNA processed_transcript A549@11.2929,AG04450@0.360992,BJ@0.288353,GM12878@9.42486,H1HESC@6.59502,HELAS3@12.6848,HEPG2@10.5779,HMEC@0.004328,HSMM@0.0325585,HUVEC@0.011614,K562@1.16487,MCF7@0.376271,NHEK@0.0242267,NHLF@0.022836,SKNSHRA@1.10013, 0 0 0 0 ENSG00000250337.1 ENST00000505775.1 chr5:27472414-27494425 6 940 21061 intergenic 2.57 0 0,1,0 0 0,0,0 0 0.292483737714259 0 73.3223404255319 2.26152604339775 0 80.2893617021277 4.04672142823228 0 1 1 chimp,human,macaque,marmoset,orangutan, lincRNA processed_transcript A549@11.2929,AG04450@0.360992,BJ@0.288353,GM12878@9.42486,H1HESC@6.59502,HELAS3@12.6848,HEPG2@10.5779,HMEC@0.004328,HSMM@0.0325585,HUVEC@0.011614,K562@1.16487,MCF7@0.376271,NHEK@0.0242267,NHLF@0.022836,SKNSHRA@1.10013, 0 0 0 0 ENSG00000250337.1 ENST00000514844.1 chr5:27472414-27494425 5 662 21341 intergenic -5.79 0 0,1,0 0 0,0,0 0 0.288646267747528 0 38.1873111782477 4.28143011105384 0 35.3111782477341 6.43859238086313 0 0 0 chimp,elephant,horse,human,macaque,marmoset,orangutan, lincRNA processed_transcript A549@11.2929,AG04450@0.360992,BJ@0.288353,GM12878@9.42486,H1HESC@6.59502,HELAS3@12.6848,HEPG2@10.5779,HMEC@0.004328,HSMM@0.0325585,HUVEC@0.011614,K562@1.16487,MCF7@0.376271,NHEK@0.0242267,NHLF@0.022836,SKNSHRA@1.10013, 0 0 0 0 ENSG00000250337.1 ENST00000514255.1 chr5:27475772-27485293 4 541 8974 intergenic 2.57 0 0,0,1 0 0,0,0 0 0 0 4.58410351201479 0.312569645642969 0 4.78743068391867 0.324827278805438 0 1 1 chimp,human,macaque,marmoset,orangutan, lincRNA processed_transcript A549@11.2929,AG04450@0.360992,BJ@0.288353,GM12878@9.42486,H1HESC@6.59502,HELAS3@12.6848,HEPG2@10.5779,HMEC@0.004328,HSMM@0.0325585,HUVEC@0.011614,K562@1.16487,MCF7@0.376271,NHEK@0.0242267,NHLF@0.022836,SKNSHRA@1.10013, 0 0 0 0 ENSG00000249785.1 ENST00000512849.1 chr5:28286496-28287772 2 521 753 intergenic -1.25 0 0,0,0 0 0,0,0 0 0 0 0 0 0 0 0 0 0 0 chimp,cow,elephant,human,macaque,marmoset,orangutan, lincRNA lincRNA A549@0.029426,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000250453.1 ENST00000504398.1 chr5:28782785-28809356 2 450 26119 intergenic 0 0 0,1,0 1 0,0,0 0 7.81668517171408 0 0 9.68923006240668 0 411.502222222222 18.4468394655232 19.755 0 0 chimp,dog,guinea_pig,horse,human,macaque,marmoset,mouse,orangutan, lincRNA lincRNA A549@0.0048025,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@3.43386,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000248391.1 ENST00000506492.1 chr5:29380403-29396088 5 465 15212 intergenic 4.83 0 0,1,0 0 0,0,0 0 14.978569550355 0 0 22.9562845122272 0 0 20.7914804102025 0 0 0 cat,chimp,cow,dog,elephant,horse,human,macaque,marmoset,orangutan,rabbit, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000248391.1 ENST00000507876.1 chr5:29383211-29390047 3 400 6432 intergenic 0 0 0,0,0 0 0,0,0 0 11.375 0 0 22.962842039801 0 0 19.4082711442786 0 1 1 chimp,human,macaque,marmoset,orangutan, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000254138.1 ENST00000523584.1 chr5:31094084-31267717 5 376 173249 exonic 0 0 0,0,0 0 0,0,0 168.191489361702 49.8276757730203 112.907 190.744680851064 59.3712806423125 182.695 301.186170212766 59.5937408008127 177.943 0 0 cat,chimp,cow,dog,elephant,guinea_pig,horse,human,macaque,marmoset,mouse,opossum,orangutan,panda,pig,rabbit,rat, antisense antisense A549@0,AG04450@0.0155405,BJ@0.025481,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0.0989245, 0 0 0 0 ENSG00000248624.1 ENST00000509750.1 chr5:31657325-31665174 3 540 7305 intronic 6.64 0 0,0,0 0 0,0,0 0 14.1175906913073 0 0 24.1522245037645 52.18 0 26.6032854209446 59.715 0 0 chimp,elephant,horse,human,macaque,marmoset,orangutan, sense_intronic sense_intronic A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0.0028145, 0 0 0 0 ENSG00000249114.1 ENST00000504817.1 chr5:31738376-31738767 1 391 0 intronic -1.45 0 0,1,1 0 0,0,0 79.4322250639386 0 0 93.4245524296675 0 11.053 89.3631713554987 0 10.612 0 0 cat,chimp,cow,dog,elephant,guinea_pig,horse,human,macaque,marmoset,mouse,orangutan,panda,pig,rabbit,rat, sense_intronic sense_intronic A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0.0165395,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000248813.1 ENST00000506865.1 chr5:31741940-31742434 1 494 0 intronic 0 0 0,1,0 0 0,0,0 0.465587044534413 0 7.36 0 0 0 0 0 0 0 0 chimp,human,macaque,marmoset,orangutan,panda, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000248378.1 ENST00000515358.1 chr5:31744095-31744558 1 463 0 intronic 0 0 0,1,0 0 0,0,0 0 0 20.516 5.89200863930886 0 11.848 0 0 12.421 0 0 cat,chimp,cow,dog,elephant,guinea_pig,horse,human,macaque,marmoset,orangutan,panda,pig,rabbit, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000250164.1 ENST00000509629.1 chr5:31747751-31748185 1 434 0 intronic 0.49 0 0,0,0 0 0,0,0 0 0 80.464 0 0 75.334 7.27880184331797 0 47.928 0 0 cat,chimp,dog,elephant,guinea_pig,horse,human,macaque,marmoset,orangutan,panda,pig, lincRNA lincRNA A549@0,AG04450@0.013611,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000249688.1 ENST00000515522.1 chr5:31754326-31754763 1 437 0 intronic 2.63 0 0,0,1 0 0,0,0 0 0 43.2 43.6407322654462 0 76.718 59.2425629290618 0 71.885 0 0 cat,chimp,cow,dog,elephant,guinea_pig,horse,human,macaque,marmoset,mouse,orangutan,panda,pig,rabbit,rat, sense_intronic sense_intronic A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0.002467,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0.002016, 0 0 0 0 ENSG00000250764.1 ENST00000503441.1 chr5:32103551-32122047 5 829 17659 intronic -0.92 0 0,0,1 0 0,0,0 0 30.1857976102837 0 0 28.0135908035563 0 0 28.2826887139702 3.402 0 1 chimp,human,macaque,orangutan, antisense antisense A549@0.489431,AG04450@0.370683,BJ@0.655026,GM12878@0.605668,H1HESC@1.27842,HELAS3@2.04964,HEPG2@2.5377,HMEC@1.14091,HSMM@0.161407,HUVEC@1.42,K562@1.27485,MCF7@1.31906,NHEK@0.273618,NHLF@1.096,SKNSHRA@0.729484, 0 0 0 0 ENSG00000250885.1 ENST00000514225.1 chr5:32646670-32652082 2 333 5077 intergenic -0.62 0 0,1,0 0 0,0,0 0 0 0 0 2.11522552688596 0 5.83783783783784 6.15205830214694 0 0 0 cat,chimp,cow,dog,elephant,guinea_pig,horse,human,macaque,marmoset,orangutan,panda,pig,rabbit, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000250697.1 ENST00000512323.1 chr5:32925745-33023433 2 444 97242 intergenic 3.14 0 0,0,0 0 0,0,0 0 17.9851915838835 68.796 0 21.9497130869378 154.861 0 22.6790995660311 172.06 0 0 cat,chimp,cow,horse,human,macaque,marmoset,mouse,orangutan,panda,pig,rabbit,rat, processed_transcript processed_transcript A549@0.611039,AG04450@0.0216485,BJ@0.0399095,GM12878@0.0229275,H1HESC@0.0033515,HELAS3@0.034409,HEPG2@0.010326,HMEC@0.051962,HSMM@0.028141,HUVEC@0.02157,K562@0.0393405,MCF7@0.0199295,NHEK@0.101749,NHLF@0.034189,SKNSHRA@0.946866, 0 0 0 0 ENSG00000248279.1 ENST00000505518.1 chr5:32947549-32962573 6 2002 13012 intergenic 2.70 1 0,0,0 0 0,0,0 0 6.32915770058408 0 11.1093906093906 9.47348601291116 0 9.90959040959041 13.0048416845988 0 1 1 chimp,human,macaque,marmoset,orangutan, lincRNA lincRNA A549@0.001081,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0.0026435,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0.000970333,NHLF@0,SKNSHRA@0.00967, 0 0 0 0 ENSG00000248279.1 ENST00000507693.1 chr5:32949099-32961535 5 505 11923 intergenic 0.41 0 0,0,1 0 0,0,0 0 5.48460957812631 16.962 44.0415841584158 10.3387570242389 0 34.9544554455446 14.1926528558249 0 0 0 cat,chimp,dog,elephant,guinea_pig,horse,human,macaque,marmoset,orangutan,rabbit, lincRNA lincRNA A549@0.001081,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0.0026435,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0.000970333,NHLF@0,SKNSHRA@0.00967, 0 0 0 0 ENSG00000249102.1 ENST00000511054.1 chr5:33009100-33025830 2 597 16131 intergenic 1.77 1 0,0,1 0 0,0,0 317.105527638191 29.481123302957 152.424 362.666666666667 35.7343624077863 134.859 338.130653266332 35.3058706837766 114.669 0 0 chimp,guinea_pig,human,macaque,orangutan, lincRNA lincRNA A549@0.003624,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0.09547,NHLF@0,SKNSHRA@0.0075755, 0 0 0 0 ENSG00000251281.1 ENST00000511840.1 chr5:33011428-33017713 3 422 5859 intergenic -5.28 1 0,0,0 0 0,0,0 118.189573459716 0 0 77.5758293838863 11.1046253626899 0 79.7274881516588 11.5924219150026 0 0 0 chimp,cow,dog,elephant,horse,human,macaque,mouse,orangutan,rat, lincRNA lincRNA A549@0.168032,AG04450@0,BJ@0.005793,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0.009416,MCF7@0,NHEK@0.018045,NHLF@0,SKNSHRA@0.095001, 0 0 0 0 ENSG00000250697.1 ENST00000510327.1 chr5:33023161-33298016 3 616 274235 intergenic 0.22 0 0,0,0 0 0,0,0 0 11.4985140481704 0 0 15.3156890987657 5.809 0 19.1383922548179 8.494 0 0 cat,chimp,cow,dog,elephant,human,macaque,marmoset,mouse,orangutan, processed_transcript processed_transcript A549@0.611039,AG04450@0.0216485,BJ@0.0399095,GM12878@0.0229275,H1HESC@0.0033515,HELAS3@0.034409,HEPG2@0.010326,HMEC@0.051962,HSMM@0.028141,HUVEC@0.02157,K562@0.0393405,MCF7@0.0199295,NHEK@0.101749,NHLF@0.034189,SKNSHRA@0.946866, 0 0 0 0 ENSG00000250697.1 ENST00000505339.1 chr5:33023207-33049507 2 392 25906 intergenic -2.71 0 0,0,0 0 0,0,0 0 10.2147764996526 0 0 15.8386474175867 0 0 19.7072492858797 0 0 1 chimp,human, processed_transcript processed_transcript A549@0.611039,AG04450@0.0216485,BJ@0.0399095,GM12878@0.0229275,H1HESC@0.0033515,HELAS3@0.034409,HEPG2@0.010326,HMEC@0.051962,HSMM@0.028141,HUVEC@0.02157,K562@0.0393405,MCF7@0.0199295,NHEK@0.101749,NHLF@0.034189,SKNSHRA@0.946866, 0 0 0 0 ENSG00000251443.1 ENST00000503577.1 chr5:33229841-33255659 4 513 25299 intergenic -0.88 0 0,1,0 0 0,0,0 100.046783625731 24.5971777540614 0 187.649122807018 27.3793430570378 0 188.325536062378 33.8562393770505 0 0 0 cat,chimp,cow,guinea_pig,horse,human,macaque,marmoset,orangutan,panda,rabbit, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000249572.1 ENST00000507251.1 chr5:33424131-33440725 2 535 16057 intergenic -1.86 0 0,1,0 1 0,0,0 0 2.72385875319175 0 0 0.412343526187955 24.936 0 10.2380893068444 27.417 0 0 cat,chimp,cow,elephant,horse,human,macaque,marmoset,orangutan,panda,pig, antisense antisense A549@1.60732,AG04450@1.73149,BJ@2.08256,GM12878@2.94054,H1HESC@6.08526,HELAS3@11.0245,HEPG2@5.9946,HMEC@0.976,HSMM@3.03188,HUVEC@2.42822,K562@1.74328,MCF7@4.40787,NHEK@1.39165,NHLF@1.59512,SKNSHRA@2.86814, 0 0 0 0 ENSG00000250583.1 ENST00000511579.1 chr5:33519721-33522335 2 915 1697 intergenic -3.94 0 0,0,1 0 0,0,0 0 0 0 0 0 0 0 0 0 1 1 chimp,human,macaque,marmoset,orangutan, lincRNA lincRNA A549@0,AG04450@0.049866,BJ@0.0587005,GM12878@0,H1HESC@0.0026985,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0.0044875,HUVEC@0,K562@0,MCF7@0,NHEK@0.040228,NHLF@0,SKNSHRA@0.006065, 0 0 0 0 ENSG00000250234.1 ENST00000507566.1 chr5:34656517-34657355 2 405 431 exonic 0 0 0,1,1 0 0,0,0 0 0 8.126 75.4271604938272 36.3062645011601 2.63 57.7234567901235 31.1020881670534 2.65 0 0 chimp,horse,human,macaque,marmoset,orangutan,pig,rabbit, antisense antisense A549@0,AG04450@0.007274,BJ@0.006049,GM12878@0,H1HESC@0.196142,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0.005601,HUVEC@0.68559,K562@0,MCF7@0.0075425,NHEK@0,NHLF@0,SKNSHRA@0.017991, 0 0 0 0 ENSG00000248969.1 ENST00000510433.1 chr5:35678586-35827120 4 536 147992 intronic 2.08 0 0,0,0 0 0,0,0 0 9.70807205794908 0 0 14.9017582031461 0 0 17.32987593924 0 0 0 cat,chimp,cow,dog,elephant,horse,human,macaque,marmoset,orangutan,pig,rabbit, antisense antisense A549@0,AG04450@0,BJ@0,GM12878@0.027634,H1HESC@0,HELAS3@0.0147445,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0.003723,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000249748.1 ENST00000503269.1 chr5:35938924-35940095 2 372 797 intergenic -2.73 1 0,0,0 0 0,0,0 0.752688172043011 0 15.12 0 0 24.941 0 0 27.037 0 0 chimp,cow,dog,guinea_pig,horse,human,macaque,marmoset,orangutan,panda,pig,rat, antisense antisense A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0.0556225,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000245711.2 ENST00000501794.2 chr5:36221157-36222004 2 718 127 intronic -3.28 1 0,0,0 0 0,0,0 0 0 0 14.6949860724234 37.6377952755905 0 26.374651810585 40.7874015748031 0 0 0 cat,chimp,cow,dog,elephant,horse,human,marmoset,orangutan,panda, antisense antisense A549@0.021929,AG04450@0.0144495,BJ@0,GM12878@0.0236075,H1HESC@0.0068735,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0.010541,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0.018473, 0 0 0 0 ENSG00000250155.1 ENST00000510740.1 chr5:36666316-36725275 3 475 58480 intronic 0.64 0 1,1,1 0 0,0,0 0 32.9167407660739 13.2 60.8842105263158 30.7706566347469 18.055 53.4231578947368 33.0723153214774 22.066 0 0 cat,chimp,cow,dog,elephant,guinea_pig,horse,human,macaque,marmoset,mouse,opossum,orangutan,panda,pig,rabbit, antisense antisense A549@0.007525,AG04450@0,BJ@0,GM12878@14.7925,H1HESC@0.0781965,HELAS3@0.01574,HEPG2@0.0459505,HMEC@0,HSMM@0.023323,HUVEC@0,K562@0.023914,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0.026984, 0 0 0 0 ENSG00000250155.1 ENST00000512329.1 chr5:36702580-36725278 3 678 22016 intergenic 7.64 0 0,1,0 0 0,0,0 0 17.424191497093 13.2 14.7699115044248 20.0717205668605 18.055 15.2949852507375 21.8638717296512 22.066 1 1 chimp,human,macaque,marmoset,orangutan, antisense antisense A549@0.007525,AG04450@0,BJ@0,GM12878@14.7925,H1HESC@0.0781965,HELAS3@0.01574,HEPG2@0.0459505,HMEC@0,HSMM@0.023323,HUVEC@0,K562@0.023914,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0.026984, 0 0 0 0 ENSG00000250155.1 ENST00000508745.1 chr5:36702732-36725297 3 586 21975 intergenic 7.64 0 1,1,1 0 0,0,0 1.12627986348123 17.4567007963595 12.32 17.0887372013652 20.1091695108077 18.055 17.6962457337884 21.9046643913538 22.066 0 1 human,macaque,marmoset, antisense antisense A549@0.007525,AG04450@0,BJ@0,GM12878@14.7925,H1HESC@0.0781965,HELAS3@0.01574,HEPG2@0.0459505,HMEC@0,HSMM@0.023323,HUVEC@0,K562@0.023914,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0.026984, 0 0 0 0 ENSG00000248044.1 ENST00000501714.1 chr5:36864527-36876759 2 2587 9643 intergenic 2.89 0 0,1,0 1 0,0,0 1.72787011982992 8.32043969718967 632.174 29.3637417858523 13.8936015762729 861 29.7100889060688 15.2535517992326 850 0 0 chimp,guinea_pig,human,macaque,marmoset,orangutan, lincRNA processed_transcript A549@0.489565,AG04450@0.576318,BJ@0.598423,GM12878@1.21746,H1HESC@0.750886,HELAS3@1.90385,HEPG2@1.32348,HMEC@0.196112,HSMM@0.581427,HUVEC@0.788512,K562@3.25075,MCF7@1.05523,NHEK@0.284178,NHLF@0.686287,SKNSHRA@1.13149, 0 0 0 0 ENSG00000248587.1 ENST00000514532.1 chr5:37840631-37874346 3 294 33417 intergenic 0 0 0,1,0 0 0,0,0 79.0204081632653 42.0480892958674 120.628 15.1836734693878 35.4898105754556 293.579 22.547619047619 36.6236047520723 197.868 0 0 NA antisense antisense A549@0,AG04450@0.069181,BJ@0.0339845,GM12878@0.004998,H1HESC@0.0943145,HELAS3@0,HEPG2@0,HMEC@0.021409,HSMM@0.0387965,HUVEC@0,K562@0,MCF7@0.0546215,NHEK@0.165512,NHLF@0.012481,SKNSHRA@0.065754, 0 0 0 0 ENSG00000248587.1 ENST00000503382.1 chr5:37872453-37874996 3 466 2073 intergenic 2.35 1 0,0,1 0 0,0,0 10.1115879828326 5.4187168355041 0 6.91845493562232 1.03762662807525 0 7.22532188841202 3.3941148094549 1.701 0 0 NA antisense antisense A549@0,AG04450@0.069181,BJ@0.0339845,GM12878@0.004998,H1HESC@0.0943145,HELAS3@0,HEPG2@0,HMEC@0.021409,HSMM@0.0387965,HUVEC@0,K562@0,MCF7@0.0546215,NHEK@0.165512,NHLF@0.012481,SKNSHRA@0.065754, 0 0 0 0 ENSG00000248587.1 ENST00000510986.1 chr5:37873821-37875073 2 817 433 intergenic 2.35 1 0,0,0 0 0,0,0 17.6058751529988 0 11.233 6.60954712362301 0 2.151 2.8531211750306 1.62817551963049 6.331 1 1 chimp,human,macaque,marmoset,orangutan, antisense retained_intron A549@0,AG04450@0.069181,BJ@0.0339845,GM12878@0.004998,H1HESC@0.0943145,HELAS3@0,HEPG2@0,HMEC@0.021409,HSMM@0.0387965,HUVEC@0,K562@0,MCF7@0.0546215,NHEK@0.165512,NHLF@0.012481,SKNSHRA@0.065754, 0 0 0 0 ENSG00000248539.1 ENST00000513673.1 chr5:37899465-37920971 4 536 20964 intergenic -0.84 0 0,0,0 0 0,0,0 0 11.0201297462316 0 0 27.2940755580996 0 0 26.5804712841061 15.834 0 1 chimp,human,macaque,marmoset, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 1 96 0 0 ENSG00000250032.1 ENST00000510938.1 chr5:37939467-37948057 2 440 8148 intergenic -2.15 0 0,0,0 0 0,0,0 0 9.91408934707904 0 0 18.2784732449681 0 4.41818181818182 19.176116838488 2.43 0 0 chimp,cow,dog,elephant,horse,human,macaque,marmoset,orangutan,panda,pig,rabbit, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000251518.1 ENST00000503870.1 chr5:37948593-37951157 2 544 2018 intergenic -3.18 1 0,0,0 0 0,0,0 31.3970588235294 0 0 0 0 0 0 0 4.131 0 0 cat,chimp,cow,dog,elephant,guinea_pig,human,macaque,marmoset,orangutan,panda,rabbit, lincRNA lincRNA A549@0,AG04450@0.041467,BJ@0,GM12878@0,H1HESC@0.01995,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0.0581535,HUVEC@0,K562@0,MCF7@0,NHEK@0.004676,NHLF@0,SKNSHRA@0.008325, 0 0 0 0 ENSG00000248533.1 ENST00000506429.1 chr5:37953504-37967066 2 485 13075 intergenic -0.10 1 0,1,0 0 0,0,0 0 15.118776290631 39.669 31.9649484536082 11.5460803059273 34.519 18.7010309278351 11.4786998087954 44.633 0 0 cat,chimp,cow,dog,elephant,guinea_pig,horse,human,macaque,marmoset,mouse,orangutan,panda,pig,rabbit,rat, lincRNA lincRNA A549@0,AG04450@0,BJ@0.0199625,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0.004225,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000250003.2 ENST00000513039.2 chr5:38025799-38184034 3 459 157772 intergenic -1.20 0 0,0,1 0 0,0,0 0 22.1810904342976 0 0 25.8530157442385 2.629 0 26.8642661562255 2.761 0 0 cat,chimp,cow,dog,elephant,horse,human,macaque,marmoset,orangutan,pig, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000248461.1 ENST00000508853.1 chr5:38148582-38153817 2 2571 2662 intergenic 2.46 0 0,1,0 0 0,0,0 17.8385842084792 0 224.565 52.2862699338779 0 215.342 49.4227926876702 2.09954921111946 163.551 0 0 chimp,dog,elephant,human,macaque,orangutan,panda,rabbit, lincRNA processed_transcript A549@0,AG04450@0,BJ@0.001881,GM12878@0,H1HESC@0,HELAS3@0.126537,HEPG2@1.40539,HMEC@0.003183,HSMM@0.0052295,HUVEC@0,K562@0,MCF7@0.031365,NHEK@0.004071,NHLF@0.0007585,SKNSHRA@0, 0 0 0 0 ENSG00000248730.1 ENST00000512496.1 chr5:38282366-38291088 4 1575 7141 intronic 4.44 1 0,1,1 0 0,0,0 0 37.4304719226999 70.77 0 31.0156840778603 1.24 0 33.2929561686038 4.657 1 1 chimp,human,macaque,marmoset,orangutan, antisense antisense A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0.0112925,HELAS3@0.0079305,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0.170705,MCF7@0,NHEK@0.001617,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000249071.1 ENST00000505267.1 chr5:38345446-38346653 2 550 655 intronic 0 0 0,0,0 0 0,0,0 0 0 38.95 0 0 53.329 0 0 47.428 0 0 chimp,elephant,human,macaque,marmoset,orangutan, antisense antisense A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000248572.1 ENST00000512603.1 chr5:38399916-38403515 3 463 3132 intronic 1.65 0 0,0,0 0 0,0,0 0 13.2614942528736 0 0 20.4380587484036 0 0 21.132503192848 0 0 0 cat,chimp,cow,dog,guinea_pig,horse,human,macaque,marmoset,orangutan,panda,pig, antisense antisense A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0.0041405,SKNSHRA@0, 0 0 0 0 ENSG00000248572.1 ENST00000514377.1 chr5:38401171-38403464 3 536 1753 intronic 1.65 0 0,0,0 0 0,0,0 0 0 0 0 0.848830576155163 0 0 0.859098687963491 0 0 0 cat,chimp,cow,dog,horse,human,macaque,marmoset,orangutan,panda,pig, antisense antisense A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0.0041405,SKNSHRA@0, 0 0 0 0 ENSG00000249491.1 ENST00000508986.1 chr5:38425138-38427478 2 329 2009 exonic -1.30 0 0,1,0 0 0,0,0 180.738601823708 5.22648083623693 29.12 214.9726443769 15.2628173220508 10.269 250.36170212766 19.3608760577402 10.85 0 0 cat,chimp,cow,dog,elephant,guinea_pig,horse,human,macaque,marmoset,mouse,opossum,orangutan,panda,pig,platypus,rabbit,rat, antisense antisense A549@0.026231,AG04450@0,BJ@0.007438,GM12878@0.0121805,H1HESC@0,HELAS3@0,HEPG2@0.0128735,HMEC@0.432966,HSMM@0.024865,HUVEC@0.0484055,K562@0,MCF7@0.100598,NHEK@0.05091,NHLF@0.005895,SKNSHRA@0.0847025, 0 0 0 0 ENSG00000251257.1 ENST00000510469.1 chr5:38461029-38468409 2 454 6924 intronic -0.21 1 0,1,0 0 0,0,0 0 45.7462449451184 18.815 0 64.5284517619873 10.95 0 60.7124494511843 14.215 1 1 chimp,human,macaque,marmoset,orangutan, antisense antisense A549@0.0060575,AG04450@0.277979,BJ@0.007181,GM12878@0,H1HESC@0,HELAS3@0.432804,HEPG2@0.065777,HMEC@0.142411,HSMM@0.420822,HUVEC@0.17069,K562@0,MCF7@0,NHEK@0,NHLF@0.161705,SKNSHRA@0.598136, 0 0 0 0 ENSG00000251257.1 ENST00000510137.1 chr5:38466265-38468441 2 335 1839 intergenic -0.22 1 1,1,1 0 0,0,0 0 34.4975530179445 18.815 0 44.8162044589451 10.95 0 45.231647634584 14.215 0 0 chimp,cow,horse,human,macaque,marmoset,orangutan,panda, antisense antisense A549@0.0060575,AG04450@0.277979,BJ@0.007181,GM12878@0,H1HESC@0,HELAS3@0.432804,HEPG2@0.065777,HMEC@0.142411,HSMM@0.420822,HUVEC@0.17069,K562@0,MCF7@0,NHEK@0,NHLF@0.161705,SKNSHRA@0.598136, 0 0 0 0 ENSG00000244968.2 ENST00000500733.2 chr5:38556888-38608964 3 3800 48272 exonic 3.90 0 0,1,0 1 0,0,0 53.8597368421053 8.95821594298972 0 62.0934210526316 20.1671155120981 16.808 62.821052631579 22.4451441829632 25.811 0 1 chimp,human,marmoset, lincRNA processed_transcript A549@0.124986,AG04450@0.15392,BJ@0.106672,GM12878@0,H1HESC@0.143355,HELAS3@0.666967,HEPG2@0.160727,HMEC@0.15732,HSMM@0.068708,HUVEC@0.115194,K562@0.089953,MCF7@0.189096,NHEK@0.00754167,NHLF@0.296613,SKNSHRA@0.984623, 0 0 0 0 ENSG00000244968.2 ENST00000500817.2 chr5:38558932-38671318 9 1333 111037 intronic 2.17 0 0,0,0 0 0,0,0 0 13.8990876914902 0 11.0165041260315 19.2400821347839 2.48 10.0090022505626 20.3021965651089 2.65 0 0 chimp,dog,guinea_pig,horse,human,macaque,marmoset,orangutan,rat, lincRNA processed_transcript A549@0.124986,AG04450@0.15392,BJ@0.106672,GM12878@0,H1HESC@0.143355,HELAS3@0.666967,HEPG2@0.160727,HMEC@0.15732,HSMM@0.068708,HUVEC@0.115194,K562@0.089953,MCF7@0.189096,NHEK@0.00754167,NHLF@0.296613,SKNSHRA@0.984623, 0 0 0 0 ENSG00000244968.2 ENST00000514291.1 chr5:38559044-38579696 2 683 19967 intronic 2.14 1 0,0,0 0 0,0,0 0 4.64286072018831 0 6.01464128843338 16.550508338759 2.48 6.44655929721815 19.5002754544999 2.65 0 0 cat,chimp,cow,elephant,human,macaque,marmoset,orangutan,panda,pig,rabbit, lincRNA processed_transcript A549@0.124986,AG04450@0.15392,BJ@0.106672,GM12878@0,H1HESC@0.143355,HELAS3@0.666967,HEPG2@0.160727,HMEC@0.15732,HSMM@0.068708,HUVEC@0.115194,K562@0.089953,MCF7@0.189096,NHEK@0.00754167,NHLF@0.296613,SKNSHRA@0.984623, 0 0 0 0 ENSG00000251189.1 ENST00000511734.1 chr5:38682172-38685228 2 552 2502 intergenic -1.70 0 0,0,0 0 0,0,0 13.8405797101449 0 46.872 10.3333333333333 1.87529976019185 62.012 11.5833333333333 3.77298161470823 77.719 0 0 cat,chimp,cow,dog,elephant,guinea_pig,human,macaque,marmoset,panda, lincRNA lincRNA A549@0,AG04450@0.004251,BJ@0,GM12878@0,H1HESC@0,HELAS3@0.0082975,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0.0037115,NHEK@0,NHLF@0.006966,SKNSHRA@0.0314395, 0 0 0 0 ENSG00000249911.1 ENST00000506463.1 chr5:38710469-38720375 5 795 9103 intergenic 0.17 0 0,0,1 0 0,0,0 0 28.7938042403603 0 24.748427672956 35.819400197737 8.28 29.4276729559748 37.6981214984071 8.52 0 0 cat,chimp,dog,horse,human,macaque,marmoset,mouse,orangutan,panda,rabbit, lincRNA lincRNA A549@0.033543,AG04450@0.0339045,BJ@0.0335895,GM12878@1.18397,H1HESC@0,HELAS3@0,HEPG2@0.021419,HMEC@0,HSMM@0.041707,HUVEC@0,K562@0.00307,MCF7@0.00514,NHEK@0.006601,NHLF@0.0728445,SKNSHRA@0.034067, 0 0 0 0 ENSG00000249740.1 ENST00000513480.1 chr5:38736157-38845870 4 579 109128 encompassing -1.58 0 0,1,0 1 0,0,0 58.7322970639033 8.67427241404589 66.42 106.298791018998 229.040438750825 48.778 108.06908462867 234.575131955135 53.779 0 0 chimp,cow,dog,elephant,guinea_pig,horse,human,macaque,marmoset,mouse,orangutan,rabbit, lincRNA processed_transcript A549@0.470979,AG04450@0.206145,BJ@0.175809,GM12878@0,H1HESC@0.0381305,HELAS3@0.966192,HEPG2@0.636306,HMEC@0.067142,HSMM@0.0422645,HUVEC@0.047788,K562@0.0498755,MCF7@0.102588,NHEK@0.275229,NHLF@0.125933,SKNSHRA@0.571444, 0 0 0 0 ENSG00000250629.1 ENST00000514586.1 chr5:38783682-38792856 2 563 8609 intergenic -1.55 0 0,1,0 0 0,0,0 0 10.5587176210942 196.315 0 7.60912998025322 139.738 0 9.03705424555698 149.717 0 0 cat,chimp,dog,horse,human,macaque,marmoset,orangutan,panda,rabbit, antisense antisense A549@0,AG04450@0.0885985,BJ@0.012849,GM12878@0,H1HESC@0,HELAS3@0.051057,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0.489968,SKNSHRA@0.117231, 0 0 0 0 ENSG00000249740.1 ENST00000512519.1 chr5:38843365-38845931 2 835 1729 intergenic 0 0 0,1,0 1 0,0,0 0 2.79930595720069 66.42 2.83473053892216 5.0855986119144 46.411 6.4622754491018 5.16136495083864 48.383 0 0 chimp,horse,human,macaque,marmoset,mouse,orangutan,rabbit, lincRNA processed_transcript A549@0.470979,AG04450@0.206145,BJ@0.175809,GM12878@0,H1HESC@0.0381305,HELAS3@0.966192,HEPG2@0.636306,HMEC@0.067142,HSMM@0.0422645,HUVEC@0.047788,K562@0.0498755,MCF7@0.102588,NHEK@0.275229,NHLF@0.125933,SKNSHRA@0.571444, 0 0 0 0 ENSG00000250048.1 ENST00000507027.1 chr5:40052393-40053426 2 560 471 intergenic -0.57 1 0,0,0 0 0,0,0 0 0 0 0 0 0 0 0 0 0 0 cat,chimp,horse,human,marmoset,orangutan,pig, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0.007317,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000250585.1 ENST00000508437.1 chr5:40260759-40267759 2 497 6501 intergenic 4.24 0 0,0,0 0 0,0,0 0 0 0 2.88531187122736 0 18.439 2.93360160965795 0 26.891 0 0 chimp,horse,human,orangutan,panda,pig,rabbit, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000249325.1 ENST00000505418.1 chr5:40763860-40764548 2 633 53 intronic -21.92 0 0,0,0 0 0,0,0 0 0 366.129 8.66034755134281 0 336.339 7.29383886255924 0 371.827 0 0 chimp,cow,horse,human,macaque,marmoset,orangutan, processed_transcript processed_transcript A549@0.226183,AG04450@0.127875,BJ@0.108409,GM12878@0.0891315,H1HESC@0.0538175,HELAS3@0.430822,HEPG2@0.0632885,HMEC@0.062062,HSMM@0.0401495,HUVEC@0.0866195,K562@0.166706,MCF7@0.0544325,NHEK@0.063712,NHLF@0.056433,SKNSHRA@0.121853, 0 0 0 0 ENSG00000248668.1 ENST00000508458.1 chr5:41870132-41871059 3 444 479 exonic -11.87 0 0,1,0 1 0,0,0 0 0 0 20.1756756756757 17.2484342379958 4.374 29.1779279279279 17.286012526096 4.66 0 0 chimp,guinea_pig,human,macaque,marmoset,orangutan, antisense antisense A549@0.0062205,AG04450@0.0222895,BJ@0.015865,GM12878@0,H1HESC@0,HELAS3@0.0095055,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0.005964,K562@0.053761,MCF7@0.0081495,NHEK@0.00264567,NHLF@0,SKNSHRA@0.033518, 0 0 0 0 ENSG00000248668.1 ENST00000510509.1 chr5:41870222-41870818 2 497 97 exonic 1.35 0 0,1,1 1 0,0,0 0 0 0 29.9959758551308 23.8350515463918 1.15 37.5593561368209 26.4742268041237 1.215 0 0 cat,chimp,cow,guinea_pig,horse,human,macaque,marmoset,mouse,orangutan,panda,rabbit,rat, antisense retained_intron A549@0.0062205,AG04450@0.0222895,BJ@0.015865,GM12878@0,H1HESC@0,HELAS3@0.0095055,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0.005964,K562@0.053761,MCF7@0.0081495,NHEK@0.00264567,NHLF@0,SKNSHRA@0.033518, 0 0 0 0 ENSG00000177738.3 ENST00000314957.3 chr5:43014516-43018826 2 2386 1922 intergenic 11.04 0 0,0,0 0 0,1,0 0 0 0 0 0 0 0 0 0 0 1 chimp,human,macaque,orangutan, lincRNA processed_transcript A549@0.861962,AG04450@0.647199,BJ@0.595981,GM12878@1.02155,H1HESC@0.1045,HELAS3@2.79504,HEPG2@1.00311,HMEC@0.193436,HSMM@0.434692,HUVEC@1.28233,K562@0.800922,MCF7@0.836874,NHEK@0.288056,NHLF@0.378911,SKNSHRA@0.275675, 0 0 0 0 ENSG00000177738.3 ENST00000499871.2 chr5:43014836-43018913 3 2268 1805 intergenic 11.04 0 0,0,1 0 0,1,0 0 0 0 0 0 0 0 0 0 1 1 chimp,human,macaque,marmoset,orangutan, lincRNA processed_transcript A549@0.861962,AG04450@0.647199,BJ@0.595981,GM12878@1.02155,H1HESC@0.1045,HELAS3@2.79504,HEPG2@1.00311,HMEC@0.193436,HSMM@0.434692,HUVEC@1.28233,K562@0.800922,MCF7@0.836874,NHEK@0.288056,NHLF@0.378911,SKNSHRA@0.275675, 0 0 0 0 ENSG00000177738.3 ENST00000503152.1 chr5:43014838-43067521 3 605 52074 encompassing 7.57 1 1,1,1 1 0,1,0 0 0.494680646771902 0 0 0.548450282290586 0 0 0.585013634443292 0 1 1 chimp,human,macaque,marmoset,orangutan, lincRNA processed_transcript A549@0.861962,AG04450@0.647199,BJ@0.595981,GM12878@1.02155,H1HESC@0.1045,HELAS3@2.79504,HEPG2@1.00311,HMEC@0.193436,HSMM@0.434692,HUVEC@1.28233,K562@0.800922,MCF7@0.836874,NHEK@0.288056,NHLF@0.378911,SKNSHRA@0.275675, 0 0 0 0 ENSG00000251131.1 ENST00000509036.1 chr5:43018531-43024349 3 469 5345 intergenic -5.51 0 0,0,0 0 0,0,0 0 0 0 0 0 0 0 0 0 1 1 chimp,human,macaque,marmoset,orangutan, antisense antisense A549@0,AG04450@0.0068315,BJ@0,GM12878@0,H1HESC@0,HELAS3@0.020343,HEPG2@0.033505,HMEC@0,HSMM@0,HUVEC@0.0148095,K562@0,MCF7@0.008519,NHEK@0,NHLF@0,SKNSHRA@0.0096305, 0 0 0 0 ENSG00000251131.1 ENST00000506791.1 chr5:43018585-43024336 3 304 5443 intergenic -3.26 0 0,1,0 0 0,0,0 0 0 0 0 0 0 0 0 0 1 1 chimp,human,macaque,marmoset,orangutan, antisense antisense A549@0,AG04450@0.0068315,BJ@0,GM12878@0,H1HESC@0,HELAS3@0.020343,HEPG2@0.033505,HMEC@0,HSMM@0,HUVEC@0.0148095,K562@0,MCF7@0.008519,NHEK@0,NHLF@0,SKNSHRA@0.0096305, 0 0 0 0 ENSG00000215068.3 ENST00000451894.2 chr5:43041677-43045366 3 1215 2470 intronic -0.30 0 0,1,0 1 0,0,0 0 0 0 0 0 0 0 0 0 1 1 chimp,human,macaque,marmoset,orangutan, lincRNA processed_transcript A549@0.818276,AG04450@0.991904,BJ@0.715483,GM12878@0.354677,H1HESC@0.005929,HELAS3@2.81734,HEPG2@0.857633,HMEC@0.088965,HSMM@0.365433,HUVEC@0.912733,K562@0.88846,MCF7@1.11934,NHEK@0.050631,NHLF@0.947364,SKNSHRA@0.289967, 0 0 0 0 ENSG00000215068.3 ENST00000505541.1 chr5:43041859-43044988 3 399 2726 intronic -0.30 0 1,1,1 0 0,0,0 0 0 0 0 0 0 0 0 0 1 1 chimp,human,macaque,marmoset,orangutan, lincRNA processed_transcript A549@0.818276,AG04450@0.991904,BJ@0.715483,GM12878@0.354677,H1HESC@0.005929,HELAS3@2.81734,HEPG2@0.857633,HMEC@0.088965,HSMM@0.365433,HUVEC@0.912733,K562@0.88846,MCF7@1.11934,NHEK@0.050631,NHLF@0.947364,SKNSHRA@0.289967, 0 0 0 0 ENSG00000215068.3 ENST00000399543.1 chr5:43042195-43045492 2 2421 874 exonic 21.19 0 1,1,1 0 0,0,0 0 0 0 0 0 0 0 0 0 0 0 chimp,human,marmoset, lincRNA retained_intron A549@0.818276,AG04450@0.991904,BJ@0.715483,GM12878@0.354677,H1HESC@0.005929,HELAS3@2.81734,HEPG2@0.857633,HMEC@0.088965,HSMM@0.365433,HUVEC@0.912733,K562@0.88846,MCF7@1.11934,NHEK@0.050631,NHLF@0.947364,SKNSHRA@0.289967, 0 0 0 0 ENSG00000215068.3 ENST00000508913.1 chr5:43042235-43045370 2 2309 824 exonic 21.19 0 0,1,0 0 0,0,0 0 0 0 0 0 0 0 0 0 0 1 chimp,human,marmoset, lincRNA retained_intron A549@0.818276,AG04450@0.991904,BJ@0.715483,GM12878@0.354677,H1HESC@0.005929,HELAS3@2.81734,HEPG2@0.857633,HMEC@0.088965,HSMM@0.365433,HUVEC@0.912733,K562@0.88846,MCF7@1.11934,NHEK@0.050631,NHLF@0.947364,SKNSHRA@0.289967, 0 0 0 0 ENSG00000215068.3 ENST00000515108.1 chr5:43042235-43045370 2 2003 1130 exonic 21.19 0 0,1,0 0 0,0,0 0 0 0 0 0 0 0 0 0 1 1 chimp,human,macaque,marmoset,orangutan, lincRNA retained_intron A549@0.818276,AG04450@0.991904,BJ@0.715483,GM12878@0.354677,H1HESC@0.005929,HELAS3@2.81734,HEPG2@0.857633,HMEC@0.088965,HSMM@0.365433,HUVEC@0.912733,K562@0.88846,MCF7@1.11934,NHEK@0.050631,NHLF@0.947364,SKNSHRA@0.289967, 0 0 0 0 ENSG00000249492.1 ENST00000504469.1 chr5:43484061-43488542 2 438 4041 intronic -4.85 0 0,1,0 1 0,0,0 0 16.3192279138827 0 0 22.804008908686 7.268 0 27.3318485523385 7.378 0 0 cat,chimp,cow,dog,guinea_pig,horse,human,macaque,marmoset,orangutan,panda,pig, antisense retained_intron A549@0.112158,AG04450@0.04234,BJ@0.058438,GM12878@0.201441,H1HESC@0.032361,HELAS3@0.271701,HEPG2@0.080906,HMEC@0,HSMM@0.0046765,HUVEC@0.0147065,K562@0.135583,MCF7@0.0645915,NHEK@0.022138,NHLF@0.0087705,SKNSHRA@0.0950095, 0 0 0 0 ENSG00000249492.1 ENST00000505645.1 chr5:43484174-43509458 3 479 24801 exonic 0 0 0,1,0 0 0,0,0 111.983298538622 17.5140921737027 0 173.893528183716 27.9129067376316 7.268 125.434237995825 84.5582839401637 7.378 0 0 cat,chimp,dog,horse,human,macaque,marmoset,orangutan,panda,rat, antisense antisense A549@0.112158,AG04450@0.04234,BJ@0.058438,GM12878@0.201441,H1HESC@0.032361,HELAS3@0.271701,HEPG2@0.080906,HMEC@0,HSMM@0.0046765,HUVEC@0.0147065,K562@0.135583,MCF7@0.0645915,NHEK@0.022138,NHLF@0.0087705,SKNSHRA@0.0950095, 0 0 0 0 ENSG00000248554.1 ENST00000512498.1 chr5:43511160-43521913 3 569 10180 intronic 5.28 0 0,0,0 0 0,0,0 0 2.0950884086444 0 0 0.783104125736739 0 0 0.93467583497053 0 0 1 chimp,human, antisense antisense A549@0,AG04450@0.0041175,BJ@0,GM12878@0.009817,H1HESC@0,HELAS3@0.0238435,HEPG2@0.0188435,HMEC@0,HSMM@0.0132005,HUVEC@0,K562@0.0046805,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 3 10 0 0 ENSG00000248240.1 ENST00000504277.1 chr5:43515376-43525412 3 509 9523 intergenic -2.61 0 0,0,0 1 0,0,0 0 0 0 0 0 0 0 0 1.175 0 1 chimp,human,marmoset,orangutan, antisense antisense A549@0.019761,AG04450@0,BJ@0.012641,GM12878@0.0112495,H1HESC@0,HELAS3@0.0231895,HEPG2@0.011703,HMEC@0,HSMM@0.0044525,HUVEC@0,K562@0,MCF7@0.0080315,NHEK@0,NHLF@0,SKNSHRA@0.004439, 0 0 0 0 ENSG00000248092.2 ENST00000513560.1 chr5:43575425-43603206 3 1037 26740 exonic 6.29 0 0,1,1 1 0,0,0 4.03085824493732 5.23945400149589 12.189 8.25843780135005 25.3362378459237 42.148 8.71552555448409 41.4250934928945 37.465 1 1 chimp,human,macaque,marmoset,orangutan, lincRNA processed_transcript A549@0.996112,AG04450@1.13705,BJ@1.1412,GM12878@2.95932,H1HESC@0.598704,HELAS3@4.16596,HEPG2@2.0259,HMEC@0.678158,HSMM@0.947849,HUVEC@0.912023,K562@2.10044,MCF7@0.83603,NHEK@0.480829,NHLF@1.47716,SKNSHRA@2.50249, 0 0 0 0 ENSG00000248092.2 ENST00000515466.1 chr5:43575880-43603278 2 555 26841 exonic 0 0 0,1,0 1 0,0,0 8.82342342342342 5.21973845981893 18.966 20.6738738738739 25.240900115495 52.835 21.2144144144144 41.2692150068924 45.705 0 0 chimp,cow,elephant,human,macaque,marmoset,mouse,orangutan,pig,rabbit,rat, lincRNA processed_transcript A549@0.996112,AG04450@1.13705,BJ@1.1412,GM12878@2.95932,H1HESC@0.598704,HELAS3@4.16596,HEPG2@2.0259,HMEC@0.678158,HSMM@0.947849,HUVEC@0.912023,K562@2.10044,MCF7@0.83603,NHEK@0.480829,NHLF@1.47716,SKNSHRA@2.50249, 0 0 0 0 ENSG00000248092.2 ENST00000503484.1 chr5:43578439-43603039 3 500 24096 exonic 3.14 0 0,1,0 1 0,0,0 8.36 5.81436752988048 12.189 12.6 28.1163263612218 35.767 13.068 45.9705760292165 29.137 0 0 human, lincRNA processed_transcript A549@0.996112,AG04450@1.13705,BJ@1.1412,GM12878@2.95932,H1HESC@0.598704,HELAS3@4.16596,HEPG2@2.0259,HMEC@0.678158,HSMM@0.947849,HUVEC@0.912023,K562@2.10044,MCF7@0.83603,NHEK@0.480829,NHLF@1.47716,SKNSHRA@2.50249, 0 0 0 0 ENSG00000248092.2 ENST00000500258.2 chr5:43579232-43603165 3 454 23475 exonic -0.99 0 0,1,0 1 0,0,0 9.20704845814978 5.96817891373802 12.189 18.863436123348 28.8601064962726 39.343 19.9074889867841 47.1866666666667 34.473 0 0 chimp,cow,horse,human,macaque,marmoset,orangutan,pig,rabbit,rat, lincRNA processed_transcript A549@0.996112,AG04450@1.13705,BJ@1.1412,GM12878@2.95932,H1HESC@0.598704,HELAS3@4.16596,HEPG2@2.0259,HMEC@0.678158,HSMM@0.947849,HUVEC@0.912023,K562@2.10044,MCF7@0.83603,NHEK@0.480829,NHLF@1.47716,SKNSHRA@2.50249, 0 0 0 0 ENSG00000248092.2 ENST00000506247.1 chr5:43588743-43603332 2 577 14010 exonic 0.53 0 0,1,0 1 0,0,0 28.369150779896 1.91341898643826 8.569 65.7504332755633 4.06552462526767 42.613 88.4176776429809 7.21605995717345 40.105 0 0 chimp,cow,dog,elephant,guinea_pig,horse,human,macaque,marmoset,mouse,orangutan,pig,rabbit,rat, lincRNA processed_transcript A549@0.996112,AG04450@1.13705,BJ@1.1412,GM12878@2.95932,H1HESC@0.598704,HELAS3@4.16596,HEPG2@2.0259,HMEC@0.678158,HSMM@0.947849,HUVEC@0.912023,K562@2.10044,MCF7@0.83603,NHEK@0.480829,NHLF@1.47716,SKNSHRA@2.50249, 142 2 0 0 ENSG00000249276.1 ENST00000508829.1 chr5:43874469-43886730 2 337 11922 intergenic -2.33 0 0,0,0 0 0,0,0 0 22.593105183694 0 0 31.9484985740648 7.362 0 34.0283509478275 9.368 0 0 chimp,human,macaque,orangutan,panda, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0.0156665,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0.00753133,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000248464.1 ENST00000502457.1 chr5:44388834-44414091 3 1891 23362 exonic 0.40 1 0,1,0 0 0,0,0 52.1549444738234 28.4375909596781 368.383 69.2131147540984 43.3897354678538 433.725 69.0973030142781 44.9196130468282 388.54 0 0 chimp,dog,elephant,horse,human,macaque,marmoset,orangutan,panda,pig,rabbit, lincRNA processed_transcript A549@0,AG04450@0.002487,BJ@0,GM12878@0,H1HESC@0.004707,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0.0298755,SKNSHRA@0, 0 0 0 0 ENSG00000249203.1 ENST00000505706.1 chr5:44495720-44510342 3 581 14037 intergenic -1.38 0 0,0,0 0 0,0,0 0 49.7100520054143 0 12.9156626506024 62.1977630547838 8.062 18.118760757315 68.847047089834 9.406 0 0 chimp,dog,elephant,guinea_pig,horse,human,macaque,marmoset,orangutan,panda,pig,rabbit,rat, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000249203.1 ENST00000510758.1 chr5:44500734-44510384 3 536 9110 intergenic 3.39 0 0,0,1 0 0,0,0 0 28.5335894621295 0 20.7164179104478 33.4734357848518 4.462 24.1791044776119 36.48682766191 5.758 0 0 chimp,cow,dog,elephant,human,macaque,marmoset,orangutan,panda,rabbit, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000250418.1 ENST00000505050.1 chr5:44698533-44700910 2 447 1928 intergenic 4.91 0 0,0,0 0 0,0,0 0 0 0 0 0 0 0 2.26867219917012 0 0 0 chimp,cow,human,macaque,marmoset,panda, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000251141.1 ENST00000503452.1 chr5:44745002-44808879 3 735 63138 intergenic -4.60 0 1,1,1 0 0,0,0 0 3.439133326998 43.664 3.71156462585034 9.88757958757009 140.328 3.75646258503401 17.5036903291203 146.734 1 1 chimp,human,macaque,marmoset,orangutan, antisense antisense A549@0.042156,AG04450@0.20107,BJ@0.037898,GM12878@2.21156,H1HESC@0.658063,HELAS3@18.4572,HEPG2@0.623289,HMEC@0.083166,HSMM@0.137549,HUVEC@0.082773,K562@0.584809,MCF7@0.0182015,NHEK@0.191861,NHLF@0.128985,SKNSHRA@0.533475, 0 0 0 0 ENSG00000251141.1 ENST00000514597.1 chr5:44745111-44808844 4 655 63072 intergenic -3.82 0 0,1,0 0 0,0,0 0 3.44273211567732 43.664 4.16488549618321 9.89792617960426 140.328 4.21526717557252 17.5220065956367 146.734 1 1 chimp,human,macaque,marmoset,orangutan, antisense antisense A549@0.042156,AG04450@0.20107,BJ@0.037898,GM12878@2.21156,H1HESC@0.658063,HELAS3@18.4572,HEPG2@0.623289,HMEC@0.083166,HSMM@0.137549,HUVEC@0.082773,K562@0.584809,MCF7@0.0182015,NHEK@0.191861,NHLF@0.128985,SKNSHRA@0.533475, 0 0 0 0 ENSG00000251141.1 ENST00000505302.1 chr5:44745240-44808843 3 465 63134 intergenic 1.44 0 1,1,1 0 0,0,0 0 3.43935122121202 43.664 0 9.88820603795102 140.328 0 17.5047993157411 146.734 1 1 chimp,human,macaque,marmoset,orangutan, antisense antisense A549@0.042156,AG04450@0.20107,BJ@0.037898,GM12878@2.21156,H1HESC@0.658063,HELAS3@18.4572,HEPG2@0.623289,HMEC@0.083166,HSMM@0.137549,HUVEC@0.082773,K562@0.584809,MCF7@0.0182015,NHEK@0.191861,NHLF@0.128985,SKNSHRA@0.533475, 0 0 0 0 ENSG00000251141.1 ENST00000508945.1 chr5:44746099-44808861 4 291 62465 intergenic -4.60 0 0,1,1 0 0,0,0 0 3.47618666453214 43.664 0 9.99410870087249 140.328 9.05841924398625 17.6417033538782 146.734 1 1 chimp,human,macaque,marmoset,orangutan, antisense antisense A549@0.042156,AG04450@0.20107,BJ@0.037898,GM12878@2.21156,H1HESC@0.658063,HELAS3@18.4572,HEPG2@0.623289,HMEC@0.083166,HSMM@0.137549,HUVEC@0.082773,K562@0.584809,MCF7@0.0182015,NHEK@0.191861,NHLF@0.128985,SKNSHRA@0.533475, 0 0 0 0 ENSG00000248779.1 ENST00000511712.1 chr5:44753051-44765846 3 588 12203 intergenic 3.67 0 0,0,0 0 0,0,0 0 0 0 0 0 3.585 0 0 0 0 0 chimp,dog,human,macaque,marmoset,orangutan,pig, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0.133102,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0.006963,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000251141.1 ENST00000508123.1 chr5:44775796-44808768 3 569 32399 intergenic -0.48 0 0,1,0 0 0,0,0 0 0 43.664 0 4.49057069662644 140.328 0 19.2189882403778 146.734 0 0 chimp,cow,dog,elephant,horse,human,macaque,orangutan,pig, antisense antisense A549@0.042156,AG04450@0.20107,BJ@0.037898,GM12878@2.21156,H1HESC@0.658063,HELAS3@18.4572,HEPG2@0.623289,HMEC@0.083166,HSMM@0.137549,HUVEC@0.082773,K562@0.584809,MCF7@0.0182015,NHEK@0.191861,NHLF@0.128985,SKNSHRA@0.533475, 0 0 0 0 ENSG00000251141.1 ENST00000503179.1 chr5:44776858-44808861 3 772 31227 intergenic -2.12 0 0,1,0 0 0,0,0 0 0 43.664 0 4.65910910430077 140.328 0 19.9403080667371 146.734 0 0 chimp,cow,guinea_pig,horse,human,macaque,orangutan,panda,pig, antisense antisense A549@0.042156,AG04450@0.20107,BJ@0.037898,GM12878@2.21156,H1HESC@0.658063,HELAS3@18.4572,HEPG2@0.623289,HMEC@0.083166,HSMM@0.137549,HUVEC@0.082773,K562@0.584809,MCF7@0.0182015,NHEK@0.191861,NHLF@0.128985,SKNSHRA@0.533475, 0 0 0 0 ENSG00000251141.1 ENST00000505401.1 chr5:44777168-44808828 5 687 30965 intergenic -4.60 0 0,1,0 0 0,0,0 0 0 43.664 0 4.69853059906346 140.328 0 20.1090263200388 146.734 0 0 chimp,cow,human,macaque,orangutan,pig, antisense antisense A549@0.042156,AG04450@0.20107,BJ@0.037898,GM12878@2.21156,H1HESC@0.658063,HELAS3@18.4572,HEPG2@0.623289,HMEC@0.083166,HSMM@0.137549,HUVEC@0.082773,K562@0.584809,MCF7@0.0182015,NHEK@0.191861,NHLF@0.128985,SKNSHRA@0.533475, 0 0 0 0 ENSG00000251141.1 ENST00000505637.1 chr5:44777306-44808838 2 218 31312 intergenic -4.60 0 1,1,1 0 0,0,0 0 0 43.664 0 4.64646142054165 140.328 0 19.8861778231988 146.734 0 1 chimp,human,macaque,orangutan, antisense antisense A549@0.042156,AG04450@0.20107,BJ@0.037898,GM12878@2.21156,H1HESC@0.658063,HELAS3@18.4572,HEPG2@0.623289,HMEC@0.083166,HSMM@0.137549,HUVEC@0.082773,K562@0.584809,MCF7@0.0182015,NHEK@0.191861,NHLF@0.128985,SKNSHRA@0.533475, 0 0 0 0 ENSG00000248148.1 ENST00000506656.1 chr5:45035301-45098749 2 818 62628 intergenic -2.29 0 0,0,1 0 0,0,0 0 5.70925145302421 0 0 5.97461199463499 0 0 7.2375295395031 0 0 0 cat,chimp,cow,dog,elephant,guinea_pig,human,macaque,marmoset,mouse,orangutan,pig,rat, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000251117.1 ENST00000503959.1 chr5:45266826-45268115 2 416 871 intronic 0 0 0,0,0 0 0,0,0 0 121.970149253731 0 0 104.762342135476 0 0 102.442020665901 0 0 0 chimp,elephant,human,macaque,orangutan, processed_transcript processed_transcript A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000250122.1 ENST00000510987.1 chr5:45890318-45896072 2 561 5191 intergenic 6.19 0 0,0,0 0 0,0,0 0 0 0 0 6.01155846657677 0 0 12.2833750722404 0 0 1 chimp,human, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0.010408,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 3 10 0 0 ENSG00000249405.1 ENST00000512599.1 chr5:50154594-50155854 2 792 466 intergenic -0.85 0 0,0,0 0 0,0,0 0 0 0 11.9545454545455 0 0 12.1742424242424 0 0 0 0 cat,chimp,cow,dog,elephant,guinea_pig,horse,human,macaque,marmoset,orangutan,pig,rabbit,rat, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000251601.1 ENST00000514113.1 chr5:50225318-50230355 3 379 4654 intergenic -3.13 0 0,0,0 0 0,0,0 0 0 0 19.6253298153034 10.3304684142673 0 57.6200527704486 14.2997421572841 0 0 0 chimp,cow,horse,human,macaque,marmoset,orangutan,pig,rabbit, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0.0121565,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000250360.1 ENST00000510349.1 chr5:50261521-50262842 2 567 752 intergenic 7.20 0 0,0,0 0 0,0,0 0 16.844414893617 8.05 22.700176366843 47.8617021276596 33.994 17.5485008818342 31.2273936170213 40.425 0 0 cat,chimp,cow,dog,elephant,horse,human,macaque,marmoset,orangutan,panda,pig,rabbit, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0.0213485,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0.480997, 0 0 0 0 ENSG00000251573.2 ENST00000513880.2 chr5:50265051-50265801 3 222 524 intergenic 0 0 1,1,1 0 0,0,0 0 0 77.814 23.8198198198198 19.1736641221374 76.116 29.9054054054054 21.6870229007634 86.716 0 0 chimp,cow,horse,human,macaque,marmoset,orangutan, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0.006888,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0.0681575, 0 0 0 0 ENSG00000251573.2 ENST00000506534.2 chr5:50265051-50266001 2 604 344 intergenic 5.88 0 0,0,1 0 0,0,0 0 0 77.814 11.2185430463576 29.2063953488372 74.38 13.8129139072848 33.0348837209302 88.493 0 0 cat,chimp,cow,elephant,horse,human,macaque,marmoset,orangutan,panda,pig, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0.006888,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0.0681575, 0 0 0 0 ENSG00000248918.2 ENST00000508923.2 chr5:50265494-50266021 2 430 95 intergenic 2.64 0 0,1,0 0 0,0,0 6.39767441860465 0 1.434 40.9581395348837 0 4.965 45.646511627907 0 6.303 0 0 cat,chimp,cow,dog,elephant,guinea_pig,horse,human,macaque,marmoset,mouse,orangutan,panda,pig,rat, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0.009519,NHEK@0,NHLF@0,SKNSHRA@0.643771, 0 0 0 0 ENSG00000251125.1 ENST00000509423.1 chr5:50746992-50757923 3 938 9989 intergenic -1.45 0 0,0,0 0 0,0,0 67.8059701492537 51.5316848533387 39.886 67.2398720682303 37.8351186304935 78.673 67.271855010661 41.0785864450896 54.178 0 0 cat,chimp,dog,elephant,horse,human,macaque,marmoset,orangutan,panda,pig,rabbit, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0.00437,NHEK@0.008226,NHLF@0,SKNSHRA@0.052096, 0 0 0 0 ENSG00000248898.1 ENST00000502995.1 chr5:51971027-52083860 4 589 112238 exonic -1.73 0 0,0,0 0 0,0,0 81.2292020373514 5.71461537090825 107.371 46.6893039049236 8.58104207131275 99.615 54.4550084889643 10.0305333309574 101.13 0 0 cat,chimp,cow,dog,elephant,guinea_pig,horse,human,macaque,marmoset,mouse,orangutan,pig,rabbit,rat, antisense antisense A549@0.007321,AG04450@0.0359785,BJ@0.004152,GM12878@0.003953,H1HESC@0.004173,HELAS3@0.034628,HEPG2@0.003593,HMEC@0,HSMM@0.0069395,HUVEC@0,K562@0.00903,MCF7@0.0069345,NHEK@0.00222133,NHLF@0.013052,SKNSHRA@0.08332, 0 0 0 0 ENSG00000249899.1 ENST00000505701.1 chr5:52228249-52286108 5 590 57261 intronic 4.22 0 0,0,0 0 0,0,0 0 10.5399486561534 7.942 23.3389830508475 13.2192067899618 11.028 25.2491525423729 13.6068702956637 12.478 0 0 chimp,cow,human,macaque,marmoset,orangutan,panda,pig, antisense antisense A549@0,AG04450@0.0372595,BJ@0,GM12878@0,H1HESC@0,HELAS3@0.0040785,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0.00230433,NHLF@0,SKNSHRA@0.009122, 0 0 0 0 ENSG00000249899.1 ENST00000503559.1 chr5:52228306-52286108 5 549 57245 intronic 4.22 0 0,0,0 0 0,0,0 0 10.5428945759455 7.942 25.0819672131148 13.2229015634553 11.028 27.1347905282332 13.6106734212595 12.478 0 0 chimp,cow,human,macaque,marmoset,orangutan,panda,pig, antisense antisense A549@0,AG04450@0.0372595,BJ@0,GM12878@0,H1HESC@0,HELAS3@0.0040785,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0.00230433,NHLF@0,SKNSHRA@0.009122, 0 0 0 0 ENSG00000247796.2 ENST00000502171.2 chr5:52405672-52410953 3 2364 2913 exonic 1.95 1 1,1,1 1 0,0,0 0 0 0 1.07656514382403 1.66323377960865 12.684 1.20431472081218 4.69996567112942 12.61 0 1 chimp,human,macaque,orangutan, lincRNA processed_transcript A549@0.861666,AG04450@0.845134,BJ@0.804447,GM12878@0.547266,H1HESC@0.725179,HELAS3@0.842189,HEPG2@0.66586,HMEC@0.893633,HSMM@0.619385,HUVEC@0.208879,K562@1.12006,MCF7@0.833236,NHEK@0.835212,NHLF@1.03973,SKNSHRA@1.17602, 0 0 0 0 ENSG00000247796.2 ENST00000512301.1 chr5:52405707-52410027 2 609 3709 exonic 1.95 0 0,1,0 1 0,0,0 0 0 0 0 1.3062820167161 14.304 0 3.69129145322189 14.514 0 1 chimp,human,macaque,marmoset, lincRNA processed_transcript A549@0.861666,AG04450@0.845134,BJ@0.804447,GM12878@0.547266,H1HESC@0.725179,HELAS3@0.842189,HEPG2@0.66586,HMEC@0.893633,HSMM@0.619385,HUVEC@0.208879,K562@1.12006,MCF7@0.833236,NHEK@0.835212,NHLF@1.03973,SKNSHRA@1.17602, 0 0 0 0 ENSG00000247796.2 ENST00000499459.2 chr5:52405729-52410956 2 3135 2090 exonic 1.95 1 1,1,1 1 0,0,0 0 0 0 0.381180223285486 2.31818181818182 14.304 1.47272727272727 4.92296650717703 14.514 0 1 chimp,human,macaque, lincRNA retained_intron A549@0.861666,AG04450@0.845134,BJ@0.804447,GM12878@0.547266,H1HESC@0.725179,HELAS3@0.842189,HEPG2@0.66586,HMEC@0.893633,HSMM@0.619385,HUVEC@0.208879,K562@1.12006,MCF7@0.833236,NHEK@0.835212,NHLF@1.03973,SKNSHRA@1.17602, 0 0 0 0 ENSG00000250854.1 ENST00000514598.1 chr5:52965911-52968075 2 2001 161 intronic -1.22 0 0,1,0 0 0,0,0 19.6571714142929 0 0 50.4812593703148 0 0 51.8100949525237 0 0 0 0 chimp,guinea_pig,human,macaque,marmoset,orangutan,panda,pig, antisense antisense A549@0.001379,AG04450@0.002238,BJ@0.0064625,GM12878@0,H1HESC@0,HELAS3@0.0115135,HEPG2@0.0021725,HMEC@0,HSMM@0,HUVEC@0,K562@0.0013365,MCF7@0,NHEK@0,NHLF@0.0096895,SKNSHRA@0.0022695, 0 0 0 0 ENSG00000250447.1 ENST00000504552.1 chr5:53072474-53115516 4 999 42037 intergenic 2.68 0 0,1,0 0 0,0,0 0 18.591835763732 121.672 23.4794794794795 23.9691462283227 71.238 29.8998998998999 26.6692437614482 81.161 0 0 chimp,dog,elephant,guinea_pig,horse,human,macaque,marmoset,mouse,orangutan,pig,rabbit,rat, lincRNA lincRNA A549@0.003175,AG04450@0,BJ@0,GM12878@0.0151255,H1HESC@0.0086725,HELAS3@0.028357,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0.007124,MCF7@0.0041,NHEK@0,NHLF@0.0019455,SKNSHRA@0.0123665, 0 0 0 0 ENSG00000250447.1 ENST00000511953.1 chr5:53072844-53115506 6 864 41788 intergenic 5.75 0 0,1,0 0 0,0,0 0 18.7026179764526 121.672 0 24.1291279793242 71.238 1.40625 26.8467502632335 81.161 0 0 chimp,cow,guinea_pig,horse,human,macaque,marmoset,orangutan,rat, lincRNA lincRNA A549@0.003175,AG04450@0,BJ@0,GM12878@0.0151255,H1HESC@0.0086725,HELAS3@0.028357,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0.007124,MCF7@0.0041,NHEK@0,NHLF@0.0019455,SKNSHRA@0.0123665, 0 0 0 0 ENSG00000249069.2 ENST00000523194.1 chr5:53616774-53710957 5 712 93463 intergenic 1.79 1 0,1,1 0 0,0,0 0 6.76076094283299 0 0 8.74878829055348 5.52 0 11.2835346607749 5.78 0 0 NA processed_transcript processed_transcript A549@0.018957,AG04450@0,BJ@0,GM12878@6.53785,H1HESC@0,HELAS3@0.020316,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@8.3751,MCF7@0.0028675,NHEK@0.063078,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000249069.2 ENST00000517934.1 chr5:53618711-53697735 2 304 78718 intergenic 1.79 0 0,0,1 0 0,0,0 0 6.41516552757946 0 0 8.8974186336035 1.488 0 11.5661475139104 1.554 0 1 chimp,human, processed_transcript processed_transcript A549@0.018957,AG04450@0,BJ@0,GM12878@6.53785,H1HESC@0,HELAS3@0.020316,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@8.3751,MCF7@0.0028675,NHEK@0.063078,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000249069.2 ENST00000512618.1 chr5:53686668-53697659 3 418 10569 intergenic 5.00 0 1,1,1 0 0,0,0 0 0 113.216 0 3.08789857129341 153.234 0 21.8152143059892 134.463 0 0 cat,chimp,horse,human,macaque,marmoset,orangutan,panda, processed_transcript processed_transcript A549@0.018957,AG04450@0,BJ@0,GM12878@6.53785,H1HESC@0,HELAS3@0.020316,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@8.3751,MCF7@0.0028675,NHEK@0.063078,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000249069.2 ENST00000504609.2 chr5:53691181-53710899 6 699 19009 intergenic 2.52 1 0,0,1 0 0,0,0 0 6.67536430112052 0 0 7.80940607080856 0 0 19.6296491135778 0 0 0 cat,chimp,horse,human,macaque,marmoset,orangutan,panda, processed_transcript processed_transcript A549@0.018957,AG04450@0,BJ@0,GM12878@6.53785,H1HESC@0,HELAS3@0.020316,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@8.3751,MCF7@0.0028675,NHEK@0.063078,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000240535.2 ENST00000371487.3 chr5:54317127-54319997 3 547 2319 intergenic 2.72 0 0,0,0 0 0,0,0 8.84826325411334 33.3868046571798 23.8 41.0018281535649 65.5480810694265 43.478 41.6307129798903 67.3829236739974 39.708 1 1 chimp,human,macaque,marmoset,orangutan, antisense antisense A549@0,AG04450@0,BJ@0,GM12878@0.0106345,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0.0035475,SKNSHRA@0, 0 0 0 0 ENSG00000251376.1 ENST00000512349.1 chr5:54350256-54350968 2 589 121 intergenic 4.50 0 0,1,0 0 0,0,0 0 0 0 0 0 0 0 0 0 0 1 chimp,human,macaque,orangutan, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000248029.2 ENST00000445660.2 chr5:54359007-54362058 2 565 2484 intergenic -13.41 0 0,0,0 0 0,0,0 2.44247787610619 5.92592592592593 0 0 4.54830917874396 5.742 0 4.64009661835749 5.85 1 1 chimp,human,macaque,marmoset,orangutan, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000251307.1 ENST00000506435.1 chr5:54529762-54591029 5 765 60494 exonic 0.52 0 0,1,0 0 0,0,0 44.1882352941176 33.6761166396667 106.164 38.3346405228758 38.6957714814692 146.829 32.3202614379085 39.7747545211095 144.914 0 0 chimp,cow,dog,horse,human,macaque,marmoset,orangutan,pig,rabbit, antisense antisense A549@0.090969,AG04450@0,BJ@0,GM12878@0,H1HESC@0.0529145,HELAS3@0.354695,HEPG2@0.007085,HMEC@0.037224,HSMM@0,HUVEC@0,K562@0,MCF7@0.103665,NHEK@0.015238,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000253518.1 ENST00000447197.3 chr5:55240484-55240957 1 473 0 intronic 0 0 0,0,1 0 0,0,0 51.9429175475687 0 0 86.3551797040169 0 0 104.141649048626 0 0 0 0 cat,chimp,cow,dog,elephant,guinea_pig,horse,human,macaque,marmoset,mouse,orangutan,panda,pig,rabbit,rat, antisense antisense A549@1.02771,AG04450@1.80897,BJ@2.0579,GM12878@6.04874,H1HESC@0.196177,HELAS3@1.50418,HEPG2@2.21896,HMEC@0.045085,HSMM@0.684751,HUVEC@7.27743,K562@1.09492,MCF7@0.196781,NHEK@0.646692,NHLF@0.186973,SKNSHRA@1.75364, 0 0 0 0 ENSG00000249236.1 ENST00000511861.1 chr5:55354877-55363199 2 382 7938 intergenic 0 1 1,1,1 0 0,0,0 12.5340314136126 7.83345930964979 61.74 0 4.73028470647518 65.603 0 5.96749811035525 69.899 0 0 human, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0.43618,H1HESC@0,HELAS3@0,HEPG2@0.095616,HMEC@0,HSMM@0,HUVEC@0.125174,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0.0059185, 0 0 0 0 ENSG00000249697.1 ENST00000504349.1 chr5:55609732-55617224 2 1225 6265 intergenic 5.16 0 0,0,1 0 0,0,0 0 49.8068635275339 0 0 46.8536312849162 1.912 1.19020408163265 44.093695131684 2.008 0 0 chimp,horse,human,macaque,marmoset,mouse,orangutan,panda,rabbit, lincRNA lincRNA A549@0,AG04450@0.005256,BJ@0,GM12878@0,H1HESC@0,HELAS3@0.0068035,HEPG2@0.0094075,HMEC@0,HSMM@0,HUVEC@0,K562@0.002182,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000234553.1 ENST00000431789.1 chr5:55832410-55833653 2 534 707 intronic -7.00 0 0,0,0 0 0,0,0 0 0 0 0 0 0 0 0 1.944 0 0 chimp,human,macaque,marmoset,orangutan, sense_intronic sense_intronic A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0.033791,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0.007088, 2 44 0 0 ENSG00000228650.1 ENST00000438117.1 chr5:56066626-56068123 2 776 719 intergenic 1.30 0 0,0,0 0 0,0,0 21.5219072164948 0 0 32.9162371134021 6.02920723226704 4.216 38.9175257731959 8.64394993045897 4.403 0 0 chimp,cow,elephant,horse,human,macaque,marmoset,pig,rabbit,rat, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000237705.1 ENST00000415589.1 chr5:56137843-56157991 4 615 19527 exonic 5.15 0 0,0,1 0 0,0,0 90.009756097561 5.39642546218057 0 74.749593495935 8.59153991908639 11.475 87.1593495934959 11.2451477441491 12.24 0 0 chimp,cow,dog,horse,human,macaque,marmoset,orangutan,panda,pig,rabbit,rat, antisense antisense A549@0,AG04450@0.014348,BJ@0,GM12878@0,H1HESC@0.019988,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0.0132865,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000225230.1 ENST00000453721.1 chr5:56195868-56206541 2 912 9759 exonic -1.04 0 0,0,1 0 0,0,0 0 5.16774259657752 218.53 0 9.46521159954913 179.138 7.09429824561404 14.6644123373296 119.39 0 0 chimp,human,macaque,marmoset,orangutan, antisense antisense A549@0.003396,AG04450@0.006478,BJ@0,GM12878@0,H1HESC@0,HELAS3@0.017422,HEPG2@0.0775945,HMEC@0,HSMM@0,HUVEC@0.013024,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0.015815, 0 0 0 0 ENSG00000235635.1 ENST00000438553.1 chr5:56237134-56242979 2 432 5411 exonic 2.55 1 0,0,0 0 0,0,0 174.444444444444 20.4851228978008 0 167.083333333333 23.7795231934947 3.24 154.689814814815 28.2762890408427 3.336 0 0 chimp,cow,dog,elephant,guinea_pig,horse,human,macaque,marmoset,mouse,orangutan,rabbit,rat, antisense antisense A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000250961.1 ENST00000506106.1 chr5:56690887-56829251 4 893 137465 encompassing -0.50 0 0,1,0 0 0,0,0 0 7.66073545993526 0 0 13.6973629651184 0 0 23.5367329865784 0 0 0 cat,chimp,cow,elephant,guinea_pig,horse,human,macaque,marmoset,orangutan,rabbit, processed_transcript processed_transcript A549@3.40354,AG04450@0.82889,BJ@1.79358,GM12878@0.9414,H1HESC@0,HELAS3@17.9553,HEPG2@0,HMEC@0,HSMM@0,HUVEC@1.88864,K562@0,MCF7@0.0080065,NHEK@0,NHLF@0.002175,SKNSHRA@1.71165, 0 0 0 0 ENSG00000248294.1 ENST00000513392.1 chr5:56869854-56910168 4 405 39903 intergenic -3.01 0 0,0,0 0 0,0,0 0 8.29258451745483 13.384 0 10.4628724657294 8.207 0 11.1630955066035 29.539 0 0 cat,chimp,cow,dog,elephant,guinea_pig,horse,human,macaque,orangutan,panda,rabbit, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0.039458, 0 0 0 0 ENSG00000249436.1 ENST00000509844.1 chr5:56910216-56913258 2 818 2222 intergenic -6.42 0 0,0,1 0 0,0,0 13.7775061124694 14.7574257425743 0 2.72860635696822 0 0 9.59413202933985 3.93969396939694 3.367 0 0 cat,chimp,cow,dog,elephant,guinea_pig,horse,human,macaque,marmoset,orangutan,panda,pig,platypus,rabbit,rat, lincRNA lincRNA A549@0,AG04450@0.0164,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0.039782, 0 0 0 0 ENSG00000249198.1 ENST00000502647.1 chr5:57047019-57047544 1 525 0 intergenic -7.68 0 0,0,0 0 0,0,0 0 0 6.688 8.51619047619048 0 8.969 11.1542857142857 0 12.693 0 1 chimp,human,orangutan, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0.008642, 1 96 0 0 ENSG00000249584.1 ENST00000510444.1 chr5:57186154-57194989 3 4066 4765 intergenic 1.58 0 0,0,0 0 0,0,0 4.63846532218396 0 0 0.840875553369405 2.9215110178384 0 0.888834235120512 4.77061909758657 0 0 1 chimp,human,macaque,orangutan, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0.0014605,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0.001207,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0.001117, 0 0 0 0 ENSG00000248132.1 ENST00000505861.1 chr5:57403459-57418168 5 1170 13531 intergenic 2.80 0 0,0,0 0 0,0,0 14.2888888888889 0.900894242849752 62.878 29.0316239316239 3.06244919074717 68.985 33.0393162393162 4.55413494937551 81.33 0 0 cat,chimp,cow,elephant,guinea_pig,horse,human,macaque,marmoset,orangutan,pig, lincRNA lincRNA A549@0.041311,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0.0439675,HUVEC@0.0082775,K562@0,MCF7@0.0052105,NHEK@0.00224733,NHLF@0.009853,SKNSHRA@0.0533785, 0 0 0 0 ENSG00000248475.1 ENST00000504240.1 chr5:58037408-58080606 2 474 42722 intronic -5.35 0 0,0,0 0 0,0,0 0 19.2384251673611 0 0 13.092996582557 0 0 15.1088900332381 0 1 1 chimp,human,macaque,marmoset,orangutan, antisense antisense A549@0.0664905,AG04450@0,BJ@0,GM12878@0.49573,H1HESC@0.0303505,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000248475.1 ENST00000509476.1 chr5:58037408-58112926 4 637 74875 intronic -5.35 0 0,1,0 0 0,0,0 0 15.5192787979967 0 0 11.0420300500835 0 0 12.1689749582638 0 1 1 chimp,human,macaque,marmoset,orangutan, antisense antisense A549@0.0664905,AG04450@0,BJ@0,GM12878@0.49573,H1HESC@0.0303505,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 1 96 0 0 ENSG00000248733.1 ENST00000510198.1 chr5:58142712-58159241 3 448 16077 intronic -1.09 0 0,0,0 0 0,0,0 0 67.1633389313927 0 18.3191964285714 58.4741556260496 5.094 17.2433035714286 55.6886857000684 4.624 0 0 chimp,elephant,guinea_pig,horse,human,macaque,marmoset,orangutan, antisense antisense A549@0.0068825,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000247345.2 ENST00000500224.2 chr5:58335588-58359330 2 727 23013 intronic 3.07 0 0,1,1 0 0,0,0 205.25447042641 22.695259201321 180.526 179.661623108666 16.3888671620388 244.352 116.327372764787 18.1728588189284 233.661 0 0 chimp,cow,elephant,human,macaque,marmoset,mouse,orangutan,rat, antisense antisense A549@0.090212,AG04450@0,BJ@0,GM12878@2.24752,H1HESC@0.014942,HELAS3@0,HEPG2@0.0197285,HMEC@0,HSMM@0.005645,HUVEC@0,K562@0.0707505,MCF7@0.0364775,NHEK@0,NHLF@0,SKNSHRA@0.0031175, 0 0 0 0 ENSG00000248935.1 ENST00000502993.1 chr5:59317076-59326799 4 461 9256 intronic -3.82 0 0,0,0 0 0,0,0 36.9869848156182 3.89747191011236 4.896 34.0976138828633 3.36462834917891 8.616 34.7418655097614 3.64541918755402 8.712 0 0 chimp,cow,elephant,human,macaque,marmoset,orangutan, antisense antisense A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000248935.1 ENST00000508696.1 chr5:59326713-59328847 2 337 1795 intronic -8.05 0 0,0,0 0 0,0,0 0 0 0 0 2.33481894150418 0 0 9.34874651810585 0 0 0 cat,chimp,cow,horse,human,macaque,marmoset,orangutan,panda,pig,rabbit, antisense antisense A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000152931.6 ENST00000515734.1 chr5:59783540-59787092 2 2314 1236 exonic -2.74 1 0,1,0 0 0,1,0 94.3815903197926 25.1343042071197 11.44 95.5639585133967 19.6399676375405 36.972 94.3297320656872 25.1877022653722 20.553 0 0 chimp,cow,elephant,guinea_pig,horse,human,macaque,marmoset,orangutan,panda,pig,rabbit, lincRNA processed_transcript A549@0.213747,AG04450@0.001278,BJ@0.003171,GM12878@0.0011465,H1HESC@0,HELAS3@0.155391,HEPG2@1.12079,HMEC@0.170613,HSMM@0.0009845,HUVEC@0,K562@0.0011875,MCF7@0,NHEK@0.378876,NHLF@0.00337,SKNSHRA@5.20373, 0 0 0 0 ENSG00000152931.6 ENST00000506884.1 chr5:59783967-59843484 4 2064 57447 intergenic 6.16 0 0,1,0 0 0,1,0 33.968023255814 8.38183020871412 143.896 27.2582364341085 10.6494856128257 191.763 27.4718992248062 11.6312427106724 166.949 0 0 chimp,horse,human,macaque,marmoset,orangutan, lincRNA processed_transcript A549@0.213747,AG04450@0.001278,BJ@0.003171,GM12878@0.0011465,H1HESC@0,HELAS3@0.155391,HEPG2@1.12079,HMEC@0.170613,HSMM@0.0009845,HUVEC@0,K562@0.0011875,MCF7@0,NHEK@0.378876,NHLF@0.00337,SKNSHRA@5.20373, 0 0 0 0 ENSG00000152931.6 ENST00000504876.1 chr5:59784034-59817221 2 590 32595 intergenic 0 0 0,1,0 0 0,1,0 58.3033898305085 12.405859794447 179.607 43.428813559322 12.2762693664673 216.192 39.0796610169492 12.8939714680166 198.892 0 0 chimp,cow,elephant,horse,human,macaque,marmoset,orangutan, lincRNA processed_transcript A549@0.213747,AG04450@0.001278,BJ@0.003171,GM12878@0.0011465,H1HESC@0,HELAS3@0.155391,HEPG2@1.12079,HMEC@0.170613,HSMM@0.0009845,HUVEC@0,K562@0.0011875,MCF7@0,NHEK@0.378876,NHLF@0.00337,SKNSHRA@5.20373, 0 0 0 0 ENSG00000233847.1 ENST00000457499.1 chr5:60213317-60215400 3 405 1674 exonic -1.42 0 0,0,1 0 0,0,0 113.681481481481 12.2831541218638 0 159.276543209877 16.0537634408602 7.688 177.906172839506 18.1176821983274 15.504 0 0 cat,chimp,cow,dog,elephant,guinea_pig,horse,human,macaque,marmoset,mouse,orangutan,panda,pig,rabbit,rat, antisense antisense A549@0.00532,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0.00602,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000251279.1 ENST00000506902.1 chr5:60457897-60527867 4 792 69172 exonic -3.55 0 0,0,0 0 0,0,0 35.7765151515152 24.6371508702943 8.432 27.8156565656566 23.39492858382 15.524 27.3888888888889 26.7533828716822 23.41 0 0 chimp,human,macaque,marmoset,orangutan,pig,rabbit,rat, antisense antisense A549@0.0414425,AG04450@0.124448,BJ@0.105683,GM12878@0.137028,H1HESC@0.15659,HELAS3@0.168115,HEPG2@0.352476,HMEC@0,HSMM@0.0769605,HUVEC@0.121522,K562@0.0828495,MCF7@0.047861,NHEK@0.043555,NHLF@0.068107,SKNSHRA@0.070289, 0 0 0 0 ENSG00000249279.1 ENST00000511794.1 chr5:60497136-60548716 2 575 51003 encompassing 3.77 1 0,0,1 0 0,0,0 0 39.1283257847578 16.79 14.2347826086957 38.8739093778797 29.355 14.784347826087 41.1843813109033 31.035 0 0 cat,chimp,elephant,guinea_pig,horse,human,macaque,marmoset,mouse,orangutan,pig,rabbit, processed_transcript processed_transcript A549@0.220297,AG04450@0.0973135,BJ@0.0335195,GM12878@0,H1HESC@0,HELAS3@0.010834,HEPG2@0,HMEC@0,HSMM@0.333978,HUVEC@0,K562@0,MCF7@0.0031415,NHEK@0.119882,NHLF@0.118891,SKNSHRA@0, 0 0 0 0 ENSG00000249279.1 ENST00000503882.1 chr5:60546384-60560756 3 637 13731 intergenic 3.77 0 0,1,0 0 0,0,0 13.7142857142857 46.0079382419343 227.56 54.0470957613815 42.2296263928337 341.674 40.9167974882261 43.9993445488311 322.374 0 0 chimp,elephant,horse,human,macaque,marmoset,orangutan, processed_transcript processed_transcript A549@0.220297,AG04450@0.0973135,BJ@0.0335195,GM12878@0,H1HESC@0,HELAS3@0.010834,HEPG2@0,HMEC@0,HSMM@0.333978,HUVEC@0,K562@0,MCF7@0.0031415,NHEK@0.119882,NHLF@0.118891,SKNSHRA@0, 0 0 0 0 ENSG00000248529.1 ENST00000505623.1 chr5:60954301-60983726 5 2100 27317 intronic 6.58 0 0,0,0 0 0,0,0 67.4204761904762 57.1565691693817 102.581 45.0480952380952 72.9073470732511 107.903 48.0642857142857 73.0291393637662 108.399 0 0 cat,chimp,cow,elephant,horse,human,marmoset,orangutan,rat, antisense antisense A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0.0025555, 0 0 0 0 ENSG00000248529.1 ENST00000507264.1 chr5:60958886-60983740 3 620 24230 intronic -2.77 0 0,0,0 0 0,0,0 0 64.4385472554684 109.245 9.49838709677419 82.0401568303756 115.421 20.391935483871 82.0701196863393 116.533 0 0 cat,chimp,cow,dog,elephant,guinea_pig,horse,human,macaque,marmoset,mouse,opossum,orangutan,panda,pig,rabbit,rat, antisense antisense A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0.0025555, 0 0 0 0 ENSG00000248529.1 ENST00000513386.1 chr5:60958977-60994259 8 1668 33600 intronic 0.38 0 0,0,0 0 0,0,0 46.2637889688249 55.5757738095238 0 50.0035971223022 72.1191964285714 0 58.8117505995204 72.8261011904762 0 1 1 chimp,human,macaque,marmoset,orangutan, antisense antisense A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0.0025555, 0 0 0 0 ENSG00000251575.2 ENST00000506550.1 chr5:61028601-61031495 2 1263 1629 intergenic 3.98 0 0,0,1 0 0,0,0 74.5526524148852 38.4039287906691 333.486 63.6983372921615 12.6728054020872 326.736 69.4663499604117 12.9398403928791 301.372 0 0 chimp,horse,human,macaque,marmoset,orangutan, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0.003237,HSMM@0.005406,HUVEC@0,K562@0,MCF7@0.0128225,NHEK@0,NHLF@0.004593,SKNSHRA@0, 0 0 0 0 ENSG00000251575.2 ENST00000512882.2 chr5:61030965-61031496 2 432 97 intergenic 3.52 0 0,0,1 0 0,0,0 63.037037037037 0 334.11 12.724537037037 0 327.319 0 0 301.834 0 0 chimp,cow,dog,horse,human,macaque,marmoset,orangutan,panda,pig, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0.003237,HSMM@0.005406,HUVEC@0,K562@0,MCF7@0.0128225,NHEK@0,NHLF@0.004593,SKNSHRA@0, 0 0 0 0 ENSG00000248199.1 ENST00000511474.1 chr5:61173936-61181956 2 452 7566 intergenic 3.41 0 0,1,0 0 0,0,0 0 3.14565159925985 7.192 39.287610619469 14.4546656093048 8.015 32.8694690265487 20.7515199577055 3.578 0 0 chimp,cow,guinea_pig,horse,human,macaque,marmoset,orangutan,panda,pig, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0.018038,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000248285.1 ENST00000502882.1 chr5:63253720-63276870 2 217 22931 encompassing -3.77 0 0,0,1 0 0,0,0 0 28.9367232131176 12.88 13.6497695852535 35.098949020976 29.479 10.9907834101382 35.3890366752431 33.623 0 0 cat,chimp,elephant,horse,human,macaque,marmoset,orangutan,panda,pig, processed_transcript processed_transcript A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0.0391165,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000250081.1 ENST00000510261.1 chr5:64782271-64782875 2 363 239 intergenic -1.42 0 0,0,1 0 0,0,0 0 0 0 0 0 0 0 0 0 0 0 chimp,dog,human,macaque,marmoset,orangutan, lincRNA lincRNA A549@0.133347,AG04450@0.0987435,BJ@0.0557365,GM12878@1.27666,H1HESC@0.0203385,HELAS3@0.685879,HEPG2@0.314971,HMEC@0.067309,HSMM@0.0513435,HUVEC@0.099638,K562@0.589234,MCF7@0.083247,NHEK@0.147461,NHLF@0.0266095,SKNSHRA@0.085102, 0 0 0 0 ENSG00000253744.1 ENST00000521596.1 chr5:65439984-65440623 2 479 158 exonic 8.08 0 0,0,1 0 0,0,0 371.931106471816 456.645569620253 7.409 288.352818371607 374.677215189873 15.277 286.732776617954 399.044303797468 15.39 0 0 cat,chimp,cow,dog,elephant,guinea_pig,horse,human,macaque,marmoset,mouse,opossum,orangutan,panda,pig,rat, antisense antisense A549@0.012907,AG04450@0,BJ@0.014877,GM12878@0.019458,H1HESC@0.030867,HELAS3@0.011035,HEPG2@0.0406505,HMEC@0,HSMM@0,HUVEC@0.007266,K562@0,MCF7@0.029543,NHEK@0,NHLF@0,SKNSHRA@0.014167, 0 0 0 0 ENSG00000251391.3 ENST00000535074.1 chr5:65492117-65867801 7 2396 373276 intergenic 1.11 0 0,0,0 0 0,1,0 21.6393989983306 11.1576688562886 0 43.9073455759599 14.0163926960212 0 46.1360601001669 15.5699857478113 0 0 0 cat,chimp,cow,dog,elephant,horse,human,macaque,marmoset,mouse,opossum,orangutan,pig,rabbit,rat, lincRNA lincRNA A549@0.0018065,AG04450@0.002464,BJ@0,GM12878@0.0033555,H1HESC@0.00103,HELAS3@0.007599,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0.0032505,MCF7@0,NHEK@0.005419,NHLF@0,SKNSHRA@0.001157, 0 0 0 0 ENSG00000248846.2 ENST00000509924.2 chr5:65502040-65505275 2 560 2673 intergenic 4.68 0 0,0,0 0 0,0,0 0 11.3019079685746 27.16 0 19.818555929667 44.733 0 18.119341563786 44.36 0 1 chimp,human,macaque, lincRNA lincRNA A549@0.065882,AG04450@0.0105355,BJ@0.004306,GM12878@0,H1HESC@0.014765,HELAS3@0.0083175,HEPG2@0,HMEC@0.080144,HSMM@0.420536,HUVEC@0,K562@0,MCF7@0.0721155,NHEK@0.231328,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000251391.3 ENST00000510964.2 chr5:65594296-65618772 4 441 24029 intergenic -0.67 0 0,0,0 0 0,0,0 107.727891156463 9.56078072329269 0 70.0952380952381 14.2523201131966 0 61.859410430839 14.60643389238 0 0 0 cat,chimp,cow,elephant,guinea_pig,human,macaque,marmoset,orangutan,rat, lincRNA lincRNA A549@0.0018065,AG04450@0.002464,BJ@0,GM12878@0.0033555,H1HESC@0.00103,HELAS3@0.007599,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0.0032505,MCF7@0,NHEK@0.005419,NHLF@0,SKNSHRA@0.001157, 0 0 0 0 ENSG00000250313.2 ENST00000508486.2 chr5:65803372-65807432 3 658 3398 intergenic -2.03 0 0,0,0 0 0,0,0 99.9240121580547 11.6044732195409 0 66.9316109422492 12.4994114184815 0 73.3556231003039 14.2954679223072 0 0 0 chimp,cow,human,macaque,marmoset,mouse,opossum,orangutan,panda,pig,rat, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0.00399467,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000249057.1 ENST00000514241.1 chr5:65958159-65958816 1 657 0 intronic -2.73 0 0,0,0 0 0,0,0 59.8904109589041 0 0 147.698630136986 0 0 138.881278538813 0 0 0 0 cat,chimp,cow,dog,elephant,guinea_pig,horse,human,marmoset,mouse,orangutan,panda,pig,rat, sense_intronic sense_intronic A549@0.002887,AG04450@0,BJ@0,GM12878@0,H1HESC@0.001398,HELAS3@0,HEPG2@0.003279,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0.009076,NHEK@0.00595733,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000229666.1 ENST00000451496.1 chr5:66297211-66299781 2 775 1793 intronic -1.50 1 0,0,1 0 0,0,0 7.66451612903226 0 64.981 1.54193548387097 0 160.933 4.75483870967742 0 151.679 0 0 cat,chimp,cow,dog,elephant,horse,human,macaque,marmoset,orangutan,panda,pig,rabbit,rat, antisense antisense A549@0.216672,AG04450@0.0585705,BJ@0.0344755,GM12878@0,H1HESC@0.0396875,HELAS3@0.081536,HEPG2@0.074949,HMEC@0.173903,HSMM@0.0364255,HUVEC@0.0466135,K562@0.965026,MCF7@0.378525,NHEK@0.209486,NHLF@0.117635,SKNSHRA@0.264898, 0 0 0 0 ENSG00000251206.1 ENST00000515077.1 chr5:66563850-66566010 3 506 1650 intergenic -4.87 1 0,1,0 0 0,0,0 87.4268774703557 125.964242424242 0 8.64426877470356 114.509090909091 6.292 6.60869565217391 125.033939393939 6.445 0 0 cat,chimp,dog,elephant,horse,human,macaque,marmoset,orangutan,panda,pig,rat, lincRNA lincRNA A549@0.021781,AG04450@0.006335,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0.0230245,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0.750827,NHEK@0.011603,NHLF@0,SKNSHRA@0.02631, 0 0 0 0 ENSG00000249364.1 ENST00000503106.1 chr5:66675206-67070862 4 553 395097 intergenic 1.06 0 0,0,0 0 0,0,0 0 9.2043295697006 39.5 3.45750452079566 9.97823319336771 1.275 2.39602169981917 12.811279255474 3.512 0 0 cat,chimp,cow,dog,elephant,human,macaque,marmoset,orangutan,panda,pig,rabbit, processed_transcript processed_transcript A549@0,AG04450@0,BJ@0.006575,GM12878@0,H1HESC@0,HELAS3@0.0074475,HEPG2@0.035321,HMEC@0.006148,HSMM@0.011547,HUVEC@0.007873,K562@0.0017515,MCF7@2.87477,NHEK@0.006505,NHLF@0.0148195,SKNSHRA@0.049898, 0 0 0 0 ENSG00000250978.1 ENST00000508512.1 chr5:66759637-66771305 5 498 11162 intergenic -4.46 0 0,1,0 0 0,0,0 0 31.7555993549543 0 0 24.0479304784089 17.978 0 22.3095323418742 26.862 0 0 chimp,horse,human,macaque,marmoset,orangutan, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0.002817,SKNSHRA@0, 0 0 0 0 ENSG00000250978.1 ENST00000515184.1 chr5:66760863-66771420 4 681 9870 intergenic -4.46 0 0,0,0 0 0,0,0 0 35.912462006079 0 0 27.1958459979737 17.978 0 25.2298885511651 26.862 0 0 cat,chimp,cow,dog,guinea_pig,horse,human,macaque,marmoset,orangutan,rabbit, lincRNA retained_intron A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0.002817,SKNSHRA@0, 0 0 0 0 ENSG00000249364.1 ENST00000514368.1 chr5:66915619-67093432 5 751 177054 intergenic 1.90 1 0,0,0 0 0,0,0 84.0745672436751 5.36460627831057 0 77.9533954727031 8.25242581359359 0 73.4327563249001 11.4106487286365 0 0 0 cat,chimp,cow,dog,elephant,guinea_pig,horse,human,macaque,marmoset,mouse,orangutan,panda,rabbit,rat, processed_transcript processed_transcript A549@0,AG04450@0,BJ@0.006575,GM12878@0,H1HESC@0,HELAS3@0.0074475,HEPG2@0.035321,HMEC@0.006148,HSMM@0.011547,HUVEC@0.007873,K562@0.0017515,MCF7@2.87477,NHEK@0.006505,NHLF@0.0148195,SKNSHRA@0.049898, 0 0 0 0 ENSG00000249736.1 ENST00000507298.1 chr5:66928094-66942617 3 638 13881 intergenic -4.99 0 0,0,1 0 0,0,0 0 3.17549167927383 0 0 3.85029896981486 0 0 21.7535480152727 0 0 0 NA lincRNA lincRNA A549@0,AG04450@0,BJ@0.0055815,GM12878@0,H1HESC@0.018353,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000250421.1 ENST00000510621.1 chr5:66995257-67198428 4 581 202584 intergenic -0.94 0 0,0,0 0 0,0,0 0 6.51144216719978 0 0 9.32221202069266 0 3.34595524956971 15.8926420645263 0 0 0 chimp,dog,elephant,human,macaque,marmoset,orangutan, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0.108757,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0.041498,MCF7@0,NHEK@0.0286713,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000250421.1 ENST00000506819.1 chr5:66995279-67114150 4 585 118280 intergenic -5.76 0 0,0,0 0 0,0,0 0 6.39611937774772 0 0 8.42029928982076 0 3.32307692307692 10.4418498478187 0 1 1 chimp,human,macaque,marmoset,orangutan, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0.108757,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0.041498,MCF7@0,NHEK@0.0286713,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000249364.1 ENST00000513234.1 chr5:67089042-67096886 3 1553 6287 intergenic 5.42 1 0,0,1 0 0,0,0 109.768834513844 21.1706696357563 0 110.343206696716 13.4183235247336 92.17 107.215711526079 13.7824081437888 90.888 0 0 cat,chimp,cow,dog,elephant,guinea_pig,horse,human,macaque,marmoset,orangutan,panda,pig,rabbit,rat, processed_transcript processed_transcript A549@0,AG04450@0,BJ@0.006575,GM12878@0,H1HESC@0,HELAS3@0.0074475,HEPG2@0.035321,HMEC@0.006148,HSMM@0.011547,HUVEC@0.007873,K562@0.0017515,MCF7@2.87477,NHEK@0.006505,NHLF@0.0148195,SKNSHRA@0.049898, 0 0 0 0 ENSG00000249364.1 ENST00000504068.1 chr5:67089046-67101063 3 790 11223 intergenic 2.14 0 0,0,1 0 0,0,0 8.26708860759494 27.0490065044997 0 24.3911392405063 22.3441147643233 92.17 27.3594936708861 22.1051412278357 90.888 0 0 chimp,guinea_pig,human,macaque,mouse,orangutan,pig,rabbit, processed_transcript processed_transcript A549@0,AG04450@0,BJ@0.006575,GM12878@0,H1HESC@0,HELAS3@0.0074475,HEPG2@0.035321,HMEC@0.006148,HSMM@0.011547,HUVEC@0.007873,K562@0.0017515,MCF7@2.87477,NHEK@0.006505,NHLF@0.0148195,SKNSHRA@0.049898, 0 0 0 0 ENSG00000249364.1 ENST00000515227.1 chr5:67089048-67101066 2 664 11352 intergenic -10.69 0 0,0,1 0 0,0,0 11.2409638554217 26.7416314305849 0 29.019578313253 22.0902043692741 92.17 32.5512048192771 21.8539464411557 90.888 0 0 cat,chimp,cow,guinea_pig,horse,human,macaque,marmoset,orangutan,panda,pig,rabbit,rat, processed_transcript processed_transcript A549@0,AG04450@0,BJ@0.006575,GM12878@0,H1HESC@0,HELAS3@0.0074475,HEPG2@0.035321,HMEC@0.006148,HSMM@0.011547,HUVEC@0.007873,K562@0.0017515,MCF7@2.87477,NHEK@0.006505,NHLF@0.0148195,SKNSHRA@0.049898, 0 0 0 0 ENSG00000249364.1 ENST00000509947.1 chr5:67093173-67095905 2 778 1952 intergenic 1.90 0 0,0,0 0 0,0,0 212.439588688946 0 54.56 133.446015424165 5.69108606557377 45.484 125.470437017995 8.46209016393443 42.654 0 0 cat,chimp,cow,dog,elephant,horse,human,macaque,marmoset,mouse,orangutan,panda,pig,rabbit,rat, processed_transcript retained_intron A549@0,AG04450@0,BJ@0.006575,GM12878@0,H1HESC@0,HELAS3@0.0074475,HEPG2@0.035321,HMEC@0.006148,HSMM@0.011547,HUVEC@0.007873,K562@0.0017515,MCF7@2.87477,NHEK@0.006505,NHLF@0.0148195,SKNSHRA@0.049898, 0 0 0 0 ENSG00000249894.1 ENST00000514791.1 chr5:67096568-67185924 3 563 88789 intergenic 2.73 0 0,0,0 0 0,0,0 0 5.53222809131762 0 0 9.57421527441462 0 0 22.4878757503745 0 0 1 chimp,human,orangutan, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0.030807,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 28 4 0 0 ENSG00000251044.1 ENST00000503685.1 chr5:67670593-67670955 1 362 0 intergenic -7.95 0 0,0,0 0 0,0,0 39.8232044198895 0 15.42 119.690607734807 0 40.25 140.232044198895 0 42.714 0 0 cat,chimp,cow,dog,elephant,guinea_pig,horse,human,macaque,marmoset,mouse,orangutan,panda,pig,rabbit,rat, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000248884.1 ENST00000507733.1 chr5:67726254-67730308 3 407 3643 intergenic 2.32 0 0,1,1 0 0,0,0 58.4152334152334 5.30798792204227 8.242 23.6117936117936 6.72769695306066 6.46 24.1621621621622 7.6404062585781 8.246 0 0 cat,chimp,cow,dog,elephant,human,macaque,marmoset,orangutan,panda,pig, lincRNA lincRNA A549@0,AG04450@0.0109335,BJ@0.006005,GM12878@0.112102,H1HESC@0.0141965,HELAS3@0.0693825,HEPG2@0,HMEC@0.029961,HSMM@0,HUVEC@0,K562@0.046945,MCF7@0.0150445,NHEK@0.0128513,NHLF@0.02829,SKNSHRA@0.022154, 0 0 0 0 ENSG00000249588.1 ENST00000515504.1 chr5:67819705-67825834 2 585 5542 intergenic 5.65 0 0,0,0 0 0,0,0 226.340170940171 0 0 216.273504273504 6.52417899675208 0 204.263247863248 4.71815229159148 0 0 0 cat,chimp,cow,dog,elephant,guinea_pig,horse,human,macaque,marmoset,mouse,opossum,orangutan,panda,pig,rabbit,rat, lincRNA lincRNA A549@0,AG04450@0.0196725,BJ@0.0357615,GM12878@0.003434,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0.007767,HUVEC@0,K562@0,MCF7@0.0070055,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000248359.1 ENST00000515199.1 chr5:67827517-67829357 2 338 1500 intergenic 0 0 0,0,0 0 0,0,0 0 0 150.382 0 0 151.875 0 0 151.825 0 1 human,macaque,marmoset,orangutan, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0.282344,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000249335.1 ENST00000503268.1 chr5:68128412-68257985 3 496 129073 intergenic -4.84 0 0,1,0 0 0,0,0 0 25.4451279508495 7.315 9.80846774193548 32.1861582205419 14.663 9.52822580645161 34.3100880896857 14.632 0 0 cat,chimp,dog,elephant,human,macaque,marmoset,orangutan,panda,rabbit, processed_transcript processed_transcript A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0.064029, 0 0 0 0 ENSG00000250066.1 ENST00000513197.1 chr5:68259073-68263672 2 415 4182 intergenic 3.06 0 0,0,0 0 0,0,0 0 7.85365853658537 7.315 9 7.49689143950263 14.663 15.9469879518072 9.01076040172167 14.632 0 0 chimp,human,macaque,marmoset,orangutan,panda, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000249352.2 ENST00000505371.2 chr5:68266519-68325754 2 524 58709 intergenic 1.42 0 0,0,0 0 0,0,0 44.3320610687023 27.0682689195864 40.196 44.4160305343511 31.2267625066003 98.644 35.3358778625954 38.1373894973513 115.149 0 0 chimp,cow,dog,horse,human,macaque,marmoset,orangutan,panda, lincRNA lincRNA A549@0,AG04450@0.0029075,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0.0047025,HUVEC@0,K562@0,MCF7@0.020194,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000249352.2 ENST00000504280.1 chr5:68322582-68325992 3 807 2599 intergenic -1.52 0 0,0,0 0 0,0,0 41.0532837670384 8.11696806464025 49.865 35.0607187112763 28.4070796460177 109.983 33.2651796778191 26.4301654482493 127.588 0 0 chimp,elephant,guinea_pig,human,macaque,marmoset,mouse,orangutan,rabbit, lincRNA lincRNA A549@0,AG04450@0.0029075,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0.0047025,HUVEC@0,K562@0,MCF7@0.020194,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000250237.1 ENST00000479830.2 chr5:68334345-68339648 2 436 4865 intergenic 3.84 0 0,1,0 0 0,0,0 0 12.1525179856115 0 0 2.32641315519013 1.434 0 2.42631038026722 1.458 0 0 chimp,cow,dog,horse,human,macaque,marmoset,mouse,orangutan,rabbit, lincRNA lincRNA A549@0.039646,AG04450@0.0102345,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0.0046975,HUVEC@0,K562@0,MCF7@0.172333,NHEK@0.0206533,NHLF@0.026432,SKNSHRA@0, 0 0 0 0 ENSG00000248664.1 ENST00000504129.1 chr5:68408939-68432221 6 940 22332 exonic -2.17 1 0,0,1 0 0,0,0 141.372340425532 48.4676697116246 0 224.603191489362 59.3048092423428 0 241.976595744681 63.0704370410174 5.773 0 0 cat,chimp,cow,dog,elephant,guinea_pig,horse,human,macaque,marmoset,mouse,opossum,orangutan,panda,rat, antisense antisense A549@0.144166,AG04450@0.075108,BJ@0.035902,GM12878@0.0855135,H1HESC@0,HELAS3@0.0291545,HEPG2@0.0340215,HMEC@0.004328,HSMM@0.075594,HUVEC@0.006292,K562@0.270148,MCF7@0.010819,NHEK@0.033831,NHLF@0.0779885,SKNSHRA@0.189739, 0 0 0 0 ENSG00000249295.1 ENST00000514270.1 chr5:68773299-68798293 2 295 24697 intronic -0.14 0 0,0,0 0 0,0,0 0 7.60614649552577 0 6.73220338983051 7.67850346195894 4.712 6.91525423728814 8.5999109203547 8.649 0 0 cat,chimp,cow,elephant,horse,human,macaque,marmoset,orangutan,pig,rabbit, processed_transcript processed_transcript A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000249295.1 ENST00000508118.1 chr5:68773307-68781439 2 324 7806 intergenic 8.57 0 0,0,0 0 0,0,0 0 2.47809377401998 0 0 1.73635664873174 0 0 2.74609274916731 0 0 0 chimp,human,orangutan,pig, processed_transcript processed_transcript A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000250552.1 ENST00000509065.1 chr5:68927362-68932778 2 2160 3254 intergenic 4.98 0 0,0,0 0 0,0,0 0 0 0 0 0 0 0 0 0 0 0 chimp,dog,elephant,horse,human,macaque,marmoset,orangutan,rabbit, lincRNA lincRNA A549@0.579376,AG04450@0.703029,BJ@0.803837,GM12878@2.5998,H1HESC@2.93438,HELAS3@2.26804,HEPG2@3.87333,HMEC@0.004319,HSMM@0.003441,HUVEC@1.03291,K562@0.39239,MCF7@2.2397,NHEK@0.0553777,NHLF@0.128478,SKNSHRA@2.01935, 0 0 0 0 ENSG00000250552.1 ENST00000513902.1 chr5:68932196-68952148 2 1890 18060 intergenic -2.29 0 0,0,0 0 0,0,0 0 0 0 0 0 0 0 35.0506644518272 0 0 1 chimp,human,macaque,orangutan, lincRNA lincRNA A549@0.579376,AG04450@0.703029,BJ@0.803837,GM12878@2.5998,H1HESC@2.93438,HELAS3@2.26804,HEPG2@3.87333,HMEC@0.004319,HSMM@0.003441,HUVEC@1.03291,K562@0.39239,MCF7@2.2397,NHEK@0.0553777,NHLF@0.128478,SKNSHRA@2.01935, 0 0 0 0 ENSG00000250763.1 ENST00000512319.1 chr5:69274357-69293139 2 687 18093 intergenic 2.71 0 0,0,0 0 0,0,0 0 0 0 0 23.1603382523628 182.979 0 36.3272536340021 166.615 0 1 chimp,human,macaque,marmoset, processed_transcript processed_transcript A549@5.20295,AG04450@3.16117,BJ@5.96343,GM12878@10.3686,H1HESC@5.82634,HELAS3@9.89255,HEPG2@11.481,HMEC@5.55596,HSMM@0.914638,HUVEC@4.43297,K562@8.4085,MCF7@7.09713,NHEK@2.40847,NHLF@1.58996,SKNSHRA@17.0624, 0 0 0 0 ENSG00000250763.1 ENST00000513644.1 chr5:69282778-69293569 2 3761 7028 intergenic 2.85 0 0,0,0 0 0,0,0 0 0 0 27.1122042010104 8.31402959590211 0 29.4777984578569 19.9048093340922 24.251 1 1 chimp,human,macaque,marmoset,orangutan, processed_transcript processed_transcript A549@5.20295,AG04450@3.16117,BJ@5.96343,GM12878@10.3686,H1HESC@5.82634,HELAS3@9.89255,HEPG2@11.481,HMEC@5.55596,HSMM@0.914638,HUVEC@4.43297,K562@8.4085,MCF7@7.09713,NHEK@2.40847,NHLF@1.58996,SKNSHRA@17.0624, 0 0 0 0 ENSG00000254353.1 ENST00000520085.1 chr5:70328995-70330227 2 705 525 intergenic -12.56 0 0,0,0 0 0,0,0 0 0 0 0 0 0 11.0212765957447 0 4.769 0 1 chimp,human,macaque,orangutan, lincRNA lincRNA A549@1.69038,AG04450@1.67993,BJ@0.553406,GM12878@2.66318,H1HESC@3.62102,HELAS3@0.370184,HEPG2@1.01492,HMEC@2.86999,HSMM@2.04347,HUVEC@1.46092,K562@2.38696,MCF7@1.0187,NHEK@3.73389,NHLF@1.27592,SKNSHRA@2.54607, 0 0 0 0 ENSG00000250387.2 ENST00000502659.2 chr5:70647682-70742169 2 2765 91720 intergenic 1.05 0 0,0,0 0 0,0,0 1.51898734177215 12.1619058002617 147.168 26.2571428571429 22.4715983427824 89.873 58.3851717902351 25.9228412559965 117.87 0 0 chimp,cow,dog,guinea_pig,human,macaque,marmoset,mouse,orangutan,pig,rabbit, lincRNA processed_transcript A549@0,AG04450@0,BJ@0,GM12878@0.002114,H1HESC@0.017147,HELAS3@0.0181025,HEPG2@0.040528,HMEC@0,HSMM@0,HUVEC@0,K562@0.0017755,MCF7@0,NHEK@0.000477,NHLF@0,SKNSHRA@0.006864, 0 0 0 0 ENSG00000250387.2 ENST00000517705.1 chr5:70649314-70742163 3 962 91883 intergenic 1.05 0 0,0,0 0 0,0,0 2.49480249480249 12.1403306378764 148.968 42.8128898128898 22.6556272651089 89.873 106.139293139293 26.3365693327384 119.796 0 0 chimp,cow,elephant,guinea_pig,horse,human,macaque,marmoset,orangutan,panda,pig,rabbit, lincRNA processed_transcript A549@0,AG04450@0,BJ@0,GM12878@0.002114,H1HESC@0.017147,HELAS3@0.0181025,HEPG2@0.040528,HMEC@0,HSMM@0,HUVEC@0,K562@0.0017755,MCF7@0,NHEK@0.000477,NHLF@0,SKNSHRA@0.006864, 0 0 0 0 ENSG00000253985.1 ENST00000518473.1 chr5:70668503-70670725 3 498 1720 intergenic -0.59 0 0,0,0 0 0,0,0 0 0 0 106.562248995984 120.151162790698 0 95.2751004016064 102.992441860465 40.05 0 0 cat,chimp,cow,elephant,guinea_pig,horse,human,macaque,marmoset,mouse,orangutan,panda,pig, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000249981.1 ENST00000510180.1 chr5:70741443-70742396 2 565 386 intergenic -5.23 0 0,0,1 0 0,0,0 66.3716814159292 0 0 52.4407079646018 124.619170984456 33.249 112.674336283186 279.720207253886 61.776 0 0 cat,chimp,cow,dog,elephant,horse,human,macaque,marmoset,mouse,opossum,orangutan,panda,pig,rabbit, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000248371.1 ENST00000506293.1 chr5:71869947-71870655 2 523 183 intergenic 4.80 0 0,0,0 0 0,0,0 0 0 0 0 161.508196721311 7.103 0 138.732240437158 12.672 0 0 cat,chimp,cow,elephant,horse,human,macaque,marmoset,orangutan,pig, lincRNA lincRNA A549@0,AG04450@0,BJ@0.004074,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0.154639,HUVEC@0.0056685,K562@0,MCF7@0,NHEK@0.00753833,NHLF@0,SKNSHRA@0.013332, 0 0 0 0 ENSG00000248371.1 ENST00000512573.1 chr5:71869947-71956496 3 591 85954 intergenic 2.88 0 0,0,0 0 0,0,0 0 9.96035088535728 0 0 13.8180538427531 6.453 0 14.5623123996556 6.721 0 0 cat,chimp,cow,elephant,horse,human,macaque,marmoset,orangutan,pig, lincRNA lincRNA A549@0,AG04450@0,BJ@0.004074,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0.154639,HUVEC@0.0056685,K562@0,MCF7@0,NHEK@0.00753833,NHLF@0,SKNSHRA@0.013332, 0 0 0 0 ENSG00000248371.1 ENST00000506250.1 chr5:71870013-71876804 3 588 6199 intergenic 2.88 0 0,0,1 0 0,0,0 0 0 0 0 6.29924181319568 0 0 6.544603968382 0 0 0 cat,chimp,cow,elephant,horse,human,macaque,marmoset,orangutan,pig, lincRNA lincRNA A549@0,AG04450@0,BJ@0.004074,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0.154639,HUVEC@0.0056685,K562@0,MCF7@0,NHEK@0.00753833,NHLF@0,SKNSHRA@0.013332, 0 0 0 0 ENSG00000251613.3 ENST00000513767.3 chr5:71982939-72057492 5 953 73592 intergenic 2.21 0 0,0,0 0 0,0,0 22.7156348373557 8.18042722035004 0 28.8205666316894 10.5012229590173 9.259 28.8205666316894 17.4781497988912 12.749 0 0 cat,chimp,cow,dog,human,macaque,marmoset,orangutan,panda, lincRNA lincRNA A549@0.002883,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0.0023685, 0 0 0 0 ENSG00000251613.3 ENST00000508217.2 chr5:71986376-72058554 3 327 71847 intergenic 0 0 0,1,0 0 0,0,0 0 6.05905604966108 0 0 10.1980876028227 0 0 17.2161120158114 0 0 0 NA lincRNA lincRNA A549@0.002883,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0.0023685, 0 0 0 0 ENSG00000249085.1 ENST00000507957.1 chr5:72090232-72112392 2 491 21667 exonic 0 0 0,1,0 0 0,0,0 13.4419551934827 7.26127290349379 115.76 21.1812627291242 6.71135828679559 143.789 21.8228105906314 7.91766280518761 144.712 0 0 chimp,cow,elephant,human,macaque,marmoset,orangutan,panda,pig, antisense antisense A549@0.0902835,AG04450@0.0989865,BJ@0.093509,GM12878@0.011864,H1HESC@0.0803575,HELAS3@0.185999,HEPG2@0.0387305,HMEC@0,HSMM@0.407868,HUVEC@0.177355,K562@0.0450945,MCF7@0.153612,NHEK@0.0370747,NHLF@0.0636895,SKNSHRA@0.086702, 0 0 0 0 ENSG00000251599.1 ENST00000508255.1 chr5:72427835-72446419 2 447 18135 intergenic 0 0 0,0,0 0 0,0,0 0 1.78296112489661 0 11.5682326621924 2.71546732837055 10.904 17.1677852348993 3.5394540942928 11.603 1 1 chimp,human,macaque,marmoset,orangutan, antisense antisense A549@0.030045,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000249743.1 ENST00000515556.1 chr5:72509774-72584666 4 786 74100 intergenic 1.09 0 0,1,0 0 0,0,0 0 33.0237516869096 139.8 4.54198473282443 30.5564777327935 54.407 11.2035623409669 35.0780026990553 57.044 0 0 chimp,cow,human,macaque,marmoset,orangutan, lincRNA lincRNA A549@0.0141175,AG04450@0.069856,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0.0080945,HUVEC@0,K562@0.0056075,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0.0390345, 0 0 0 0 ENSG00000249743.1 ENST00000513379.1 chr5:72509781-72590757 5 936 80032 intergenic 1.09 0 0,1,0 0 0,0,0 97.3974358974359 30.9927778888445 139.8 148.106837606838 29.0535660735706 54.407 148.391025641026 33.2581967213115 57.044 0 0 chimp,cow,horse,human,macaque,marmoset,mouse,orangutan, lincRNA lincRNA A549@0.0141175,AG04450@0.069856,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0.0080945,HUVEC@0,K562@0.0056075,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0.0390345, 0 0 0 0 ENSG00000249743.1 ENST00000427584.2 chr5:72509809-72540647 3 481 30353 intergenic 1.09 0 0,1,0 0 0,0,0 0 39.0927091226567 139.8 33.3076923076923 39.4499390505057 57.977 46 45.5833031331335 60.67 0 0 chimp,cow,guinea_pig,horse,human,macaque,marmoset,orangutan,pig, lincRNA lincRNA A549@0.0141175,AG04450@0.069856,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0.0080945,HUVEC@0,K562@0.0056075,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0.0390345, 0 0 0 0 ENSG00000249743.1 ENST00000503403.1 chr5:72587417-72590761 2 443 2899 intergenic -2.73 0 0,0,0 0 0,0,0 205.787810383747 0 0 304.871331828442 2.15833045877889 0 293.65237020316 3.87098999655053 0 0 0 cat,chimp,cow,dog,elephant,guinea_pig,horse,human,macaque,marmoset,mouse,orangutan,panda,platypus,rabbit,rat, lincRNA lincRNA A549@0.0141175,AG04450@0.069856,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0.0080945,HUVEC@0,K562@0.0056075,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0.0390345, 0 0 0 0 ENSG00000249743.1 ENST00000513280.1 chr5:72587763-72590749 2 436 2548 intergenic -2.73 0 0,0,0 0 0,0,0 209.091743119266 0 0 309.766055045872 0.722527472527473 4.416 298.366972477064 2.52040816326531 4.8 0 0 cat,chimp,cow,dog,elephant,guinea_pig,horse,human,macaque,marmoset,mouse,orangutan,panda,rabbit,rat, lincRNA lincRNA A549@0.0141175,AG04450@0.069856,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0.0080945,HUVEC@0,K562@0.0056075,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0.0390345, 0 0 0 0 ENSG00000251543.1 ENST00000511174.1 chr5:72633733-72634360 2 299 326 intergenic -7.02 0 0,0,0 0 0,0,0 226.622073578595 54.3957055214724 0 283.933110367893 19.9662576687117 0 306.675585284281 24.2453987730061 0 0 0 cat,chimp,dog,guinea_pig,horse,human,macaque,marmoset,mouse,orangutan,panda,rabbit,rat, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000249149.1 ENST00000505955.1 chr5:72678211-72706336 3 878 27243 intergenic 8.21 0 0,0,0 0 0,0,0 48.2630979498861 46.9711852585985 37.5 256.525056947608 36.2464119223287 54.472 319.052391799544 35.3953676173696 64.077 0 0 chimp,guinea_pig,human,macaque,orangutan, processed_transcript processed_transcript A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0.0127915,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0.0115655,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000251493.1 ENST00000513595.1 chr5:72740654-72742815 2 404 1755 intergenic -1.33 0 0,0,1 0 0,0,1 55.3366336633663 45.2205128205128 324.99 32.8292079207921 98.7088319088319 461.448 26.3094059405941 113.210826210826 508.246 0 0 cat,chimp,cow,dog,elephant,human,macaque,marmoset,orangutan,panda, processed_transcript processed_transcript A549@0.138681,AG04450@0.141457,BJ@0.131878,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0.111081,HSMM@0.608302,HUVEC@0,K562@0,MCF7@0.137155,NHEK@0.193409,NHLF@0.375563,SKNSHRA@0.093042, 0 0 0 0 ENSG00000247993.2 ENST00000514661.1 chr5:72742184-72742811 2 422 203 intergenic 0 0 0,1,0 0 0,0,0 121.568720379147 95.8522167487685 28.98 244.367298578199 82.8965517241379 64.348 279.04028436019 91.3743842364532 70.071 0 0 chimp,cow,dog,elephant,guinea_pig,horse,human,macaque,marmoset,opossum,orangutan,panda,rabbit,rat, lincRNA lincRNA A549@0.023268,AG04450@0.0216815,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0.009334,NHLF@0.018305,SKNSHRA@0.010702, 0 0 0 0 ENSG00000251604.1 ENST00000512310.1 chr5:72747323-72749220 2 778 1117 intergenic 5.58 0 0,1,0 0 0,0,0 0 0 80.157 0 0 57.798 0 0 39.699 1 1 chimp,human,macaque,marmoset,orangutan, lincRNA lincRNA A549@0.0406615,AG04450@0.0623865,BJ@0.0031025,GM12878@0,H1HESC@0.0574285,HELAS3@0,HEPG2@0,HMEC@0.00525,HSMM@0,HUVEC@0,K562@0.0139775,MCF7@0.0130045,NHEK@0.006763,NHLF@0.0099505,SKNSHRA@0.093275, 0 0 0 0 ENSG00000251324.1 ENST00000506196.1 chr5:72750012-72768721 5 435 18266 intergenic -2.58 0 0,0,0 0 0,0,0 0 5.81325960801489 0 6.20689655172414 6.77712690244169 0 7.66896551724138 8.32300448921493 0 0 0 cat,chimp,human,macaque,marmoset,orangutan, antisense antisense A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000249293.1 ENST00000506717.1 chr5:73073864-73082316 3 553 7895 intronic 0.71 0 0,0,0 0 0,0,0 0 0 0 8.16094032549729 2.11918936035465 1.488 8.16998191681736 3.20633312222926 1.506 1 1 chimp,human,macaque,marmoset,orangutan, antisense antisense A549@0,AG04450@0,BJ@0.0043525,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0.014729,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0.0520127,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000248474.1 ENST00000511395.1 chr5:73379893-73399041 2 575 18571 intergenic -3.06 0 0,1,0 0 0,0,0 0 21.6013677238705 0 0 28.1349415755748 0 0 24.6705616283453 0 0 1 chimp,human,marmoset,orangutan, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0.0521265,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0.0071265,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000250336.1 ENST00000507323.1 chr5:73407471-73408058 2 538 47 intergenic 0.99 0 0,0,0 0 0,0,0 17.9925650557621 0 0 0 0 0 8.39776951672862 0 0 1 1 chimp,human,macaque,marmoset,orangutan, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000248942.1 ENST00000507890.1 chr5:73602235-73604150 3 386 1525 intergenic 1.95 0 0,0,1 0 0,0,0 0 0 0 0 4.1855737704918 0 0 3.09901639344262 0 1 1 chimp,human,macaque,marmoset,orangutan, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000251041.1 ENST00000512458.1 chr5:73617456-73635977 3 547 17970 intergenic -3.58 0 0,0,1 0 0,0,0 0 19.587367835281 0 0 18.3173622704508 0 0 23.4266555370061 0 0 0 chimp,elephant,human,macaque,marmoset,orangutan,panda,pig, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000249343.1 ENST00000508083.1 chr5:73618311-73624122 3 721 5086 intergenic 7.87 0 0,0,0 0 0,0,0 73.6893203883495 17.426071569013 0 33.7780859916782 31.1787259142745 28.366 34.998613037448 38.4710971293748 33.444 0 0 cat,chimp,cow,dog,elephant,horse,human,macaque,marmoset,mouse,orangutan,panda,pig, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000250446.1 ENST00000506612.1 chr5:73623820-73630591 2 500 6269 intergenic -1.18 0 0,0,0 0 0,0,0 0 25.7179773488595 0 0 2.5268782899984 0 0 3.83362577763599 0 1 1 chimp,human,macaque,marmoset,orangutan, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0.00801,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000248673.1 ENST00000507781.1 chr5:73665201-73832801 3 565 167031 intergenic 0 0 0,0,0 0 0,0,0 84.7575221238938 21.8794834491801 16.56 24.4176991150442 20.4832456250636 9.717 49.5486725663717 22.6290808293072 10.097 0 0 chimp,cow,dog,elephant,horse,human,macaque,marmoset,mouse,orangutan,pig,rabbit, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000249856.1 ENST00000505200.1 chr5:74213551-74319753 5 841 105353 intergenic 2.11 0 0,0,0 0 0,0,0 0 5.12992510891954 0 0 5.36232475582091 8.961 0 13.5924938065361 9.193 0 0 chimp,horse,human,macaque,marmoset,orangutan, processed_transcript processed_transcript A549@0,AG04450@0,BJ@0.0028605,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000250889.2 ENST00000503568.1 chr5:74343544-74348468 2 532 4390 intergenic -16.05 0 0,1,1 0 0,0,0 0 35.0683371298405 0 14.1296992481203 4.72756264236902 0 14.3515037593985 6.30933940774487 0 0 0 cat,chimp,cow,horse,human,macaque, lincRNA lincRNA A549@0.056828,AG04450@0.096195,BJ@1.65175,GM12878@0,H1HESC@0.265188,HELAS3@0.161224,HEPG2@0.032909,HMEC@0.204211,HSMM@0.004269,HUVEC@0,K562@0,MCF7@0,NHEK@0.0881613,NHLF@0.802705,SKNSHRA@0.0127465, 0 0 0 0 ENSG00000250889.2 ENST00000506086.2 chr5:74343858-74348668 3 476 4330 intergenic 0 0 0,1,0 0 0,0,0 0 35.554272517321 0 15.7920168067227 4.79307159353349 11.224 16.0399159663866 6.39676674364896 15.789 0 0 cat,chimp,cow,human,macaque,marmoset,orangutan,pig, lincRNA lincRNA A549@0.056828,AG04450@0.096195,BJ@1.65175,GM12878@0,H1HESC@0.265188,HELAS3@0.161224,HEPG2@0.032909,HMEC@0.204211,HSMM@0.004269,HUVEC@0,K562@0,MCF7@0,NHEK@0.0881613,NHLF@0.802705,SKNSHRA@0.0127465, 0 0 0 0 ENSG00000247372.2 ENST00000501886.2 chr5:74615980-74632739 3 524 16231 intronic -2.17 0 0,1,0 1 0,0,0 6.7175572519084 0 31.36 0 1.38106093278295 61.632 0 1.88041402254944 63.112 0 0 chimp,elephant,human,marmoset, antisense antisense A549@0.0232815,AG04450@0,BJ@0,GM12878@0.037722,H1HESC@0,HELAS3@0.024711,HEPG2@0,HMEC@0.00777,HSMM@0,HUVEC@0,K562@0.0360205,MCF7@0.003815,NHEK@0,NHLF@0,SKNSHRA@0.0306955, 0 0 0 0 ENSG00000248881.1 ENST00000511329.1 chr5:74894307-74895205 2 752 144 exonic -0.46 0 0,0,0 0 0,0,0 0 0 0 7.60904255319149 0 16.833 11.8896276595745 0 23.007 0 0 chimp,elephant,guinea_pig,human,macaque,marmoset,orangutan,pig, antisense antisense A549@0.06961,AG04450@0.0646335,BJ@0.00974,GM12878@0.11521,H1HESC@0,HELAS3@0.024386,HEPG2@0,HMEC@0,HSMM@0.002729,HUVEC@0,K562@0.0526555,MCF7@0,NHEK@0.0101583,NHLF@0,SKNSHRA@0.0361665, 0 0 0 0 ENSG00000248127.1 ENST00000503652.1 chr5:75377771-75380011 2 689 1549 intronic 5.23 0 0,0,0 0 0,0,0 0 32.8566817301485 0 32.4020319303338 36.8560361523564 42.118 21.8301886792453 40.3324725629438 42.902 0 0 chimp,cow,elephant,guinea_pig,human,macaque,marmoset,mouse,orangutan,pig, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0.003581,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0.620869, 0 0 0 0 ENSG00000250348.1 ENST00000502589.1 chr5:75581367-75607287 3 753 25163 exonic -2.51 0 0,0,1 0 0,0,0 50.199203187251 18.5872113817907 0 71.8406374501992 17.0088622183364 3.682 80.6693227091634 18.7072686086715 3.808 0 1 chimp,human,macaque,orangutan, antisense antisense A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0.0369955,HMEC@0,HSMM@0,HUVEC@0,K562@0.0187825,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000249713.1 ENST00000511327.1 chr5:75902433-75904795 2 1586 774 intronic -0.17 1 0,0,0 0 0,0,0 0 0 37.72 0 0 33.824 1.68537200504414 4.45090439276486 39.092 0 0 cat,chimp,elephant,horse,human,macaque,marmoset,orangutan,panda,pig, antisense antisense A549@0.11846,AG04450@0.0885655,BJ@0.0250165,GM12878@0.002952,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0.0601215,K562@0,MCF7@0,NHEK@0,NHLF@0.0269085,SKNSHRA@0.077321, 0 0 0 0 ENSG00000225407.3 ENST00000507514.1 chr5:75987264-76012040 4 596 24174 exonic -4.96 1 0,0,0 0 0,0,0 27.3825503355705 20.5532803838835 11.88 13.1224832214765 24.3428063208406 17.347 13.3557046979866 29.3234466782494 17.013 0 0 cat,chimp,cow,dog,elephant,horse,human,macaque,marmoset,mouse,orangutan,panda,pig, lincRNA processed_transcript A549@0.0302845,AG04450@0.090743,BJ@0.044332,GM12878@0.100004,H1HESC@0.036266,HELAS3@0,HEPG2@0,HMEC@0.006824,HSMM@0.017517,HUVEC@0.505467,K562@0.0285775,MCF7@0.0067015,NHEK@0.0442403,NHLF@0.0515625,SKNSHRA@0.2488, 0 0 0 0 ENSG00000250615.1 ENST00000512650.1 chr5:76369706-76370345 2 383 254 exonic -5.20 0 0,0,0 0 0,0,0 0 0 0 7.48825065274151 10.2086614173228 0 7.94778067885118 22.9606299212598 0 0 0 cat,chimp,cow,dog,elephant,human,macaque,marmoset,orangutan,panda,pig, antisense antisense A549@0.011276,AG04450@0,BJ@0,GM12878@0.10327,H1HESC@0,HELAS3@0.043367,HEPG2@0,HMEC@0,HSMM@0.011842,HUVEC@0.00773,K562@0.167777,MCF7@0.0367915,NHEK@0.003429,NHLF@0,SKNSHRA@0.0546495, 0 0 0 0 ENSG00000250802.2 ENST00000503969.1 chr5:76382565-76443781 4 801 60409 intronic 10.50 0 0,1,0 1 0,0,0 0 5.04413249681339 11.711 0 6.65152543495175 7.364 0 21.3272360078796 8.765 0 0 chimp,human,marmoset,orangutan,pig, processed_transcript processed_transcript A549@1.71788,AG04450@0.297892,BJ@0.3259,GM12878@0.268512,H1HESC@2.3674,HELAS3@2.18051,HEPG2@0.863721,HMEC@0,HSMM@0.085147,HUVEC@0.490931,K562@0.0273295,MCF7@0.746515,NHEK@0.004542,NHLF@0.0514495,SKNSHRA@0.813434, 0 0 0 0 ENSG00000250802.2 ENST00000505918.1 chr5:76382592-76383741 2 566 581 intronic 6.50 0 0,1,0 1 0,0,0 0 0 11.711 2.53356890459364 37.4423407917384 7.364 2.57597173144876 37.3046471600688 8.765 1 1 chimp,human,macaque,marmoset,orangutan, processed_transcript retained_intron A549@1.71788,AG04450@0.297892,BJ@0.3259,GM12878@0.268512,H1HESC@2.3674,HELAS3@2.18051,HEPG2@0.863721,HMEC@0,HSMM@0.085147,HUVEC@0.490931,K562@0.0273295,MCF7@0.746515,NHEK@0.004542,NHLF@0.0514495,SKNSHRA@0.813434, 0 0 0 0 ENSG00000250802.2 ENST00000514905.1 chr5:76382592-76435336 7 1149 51583 intronic 4.33 0 0,1,0 1 0,0,0 5.93559617058312 4.41678459957738 11.711 0 5.73758796502724 7.364 0 9.86047728902933 8.765 1 1 chimp,human,macaque,marmoset,orangutan, processed_transcript processed_transcript A549@1.71788,AG04450@0.297892,BJ@0.3259,GM12878@0.268512,H1HESC@2.3674,HELAS3@2.18051,HEPG2@0.863721,HMEC@0,HSMM@0.085147,HUVEC@0.490931,K562@0.0273295,MCF7@0.746515,NHEK@0.004542,NHLF@0.0514495,SKNSHRA@0.813434, 0 0 0 0 ENSG00000250802.2 ENST00000515419.1 chr5:76382623-76443570 5 565 60374 intronic 5.86 0 0,1,0 1 0,0,0 0 5.04705668002783 11.711 0 6.65538145559347 7.364 0 21.3395998277404 8.765 0 0 chimp,human,macaque,marmoset,orangutan,pig, processed_transcript processed_transcript A549@1.71788,AG04450@0.297892,BJ@0.3259,GM12878@0.268512,H1HESC@2.3674,HELAS3@2.18051,HEPG2@0.863721,HMEC@0,HSMM@0.085147,HUVEC@0.490931,K562@0.0273295,MCF7@0.746515,NHEK@0.004542,NHLF@0.0514495,SKNSHRA@0.813434, 0 0 0 0 ENSG00000250802.2 ENST00000512213.1 chr5:76382626-76401633 6 675 18322 intronic 3.72 0 0,1,0 1 0,0,0 0 9.32370920205218 11.711 0 5.72895972055453 7.364 0 9.69905032201725 8.765 1 1 chimp,human,macaque,marmoset,orangutan, processed_transcript processed_transcript A549@1.71788,AG04450@0.297892,BJ@0.3259,GM12878@0.268512,H1HESC@2.3674,HELAS3@2.18051,HEPG2@0.863721,HMEC@0,HSMM@0.085147,HUVEC@0.490931,K562@0.0273295,MCF7@0.746515,NHEK@0.004542,NHLF@0.0514495,SKNSHRA@0.813434, 0 0 0 0 ENSG00000250802.2 ENST00000502433.1 chr5:76382626-76435128 6 603 51889 intronic 6.07 0 0,1,0 1 0,0,0 0 4.52217232939544 11.711 0 5.70375224035923 7.364 0 9.80232804640676 8.765 0 0 chimp,human,macaque,marmoset,orangutan,pig, processed_transcript processed_transcript A549@1.71788,AG04450@0.297892,BJ@0.3259,GM12878@0.268512,H1HESC@2.3674,HELAS3@2.18051,HEPG2@0.863721,HMEC@0,HSMM@0.085147,HUVEC@0.490931,K562@0.0273295,MCF7@0.746515,NHEK@0.004542,NHLF@0.0514495,SKNSHRA@0.813434, 0 0 0 0 ENSG00000250802.2 ENST00000512001.1 chr5:76382839-76444336 3 1665 59828 exonic 10.50 0 1,1,1 0 0,0,0 0 5.09311693521428 3.346 13.0654654654655 6.35251053018654 6.62 13.0174174174174 21.172076619643 6.91 0 0 chimp,human,marmoset,orangutan,panda,pig, processed_transcript processed_transcript A549@1.71788,AG04450@0.297892,BJ@0.3259,GM12878@0.268512,H1HESC@2.3674,HELAS3@2.18051,HEPG2@0.863721,HMEC@0,HSMM@0.085147,HUVEC@0.490931,K562@0.0273295,MCF7@0.746515,NHEK@0.004542,NHLF@0.0514495,SKNSHRA@0.813434, 0 0 0 0 ENSG00000250802.2 ENST00000514640.1 chr5:76383262-76401217 4 1296 16653 intergenic 7.62 1 0,0,0 1 0,0,0 0 10.2581516843812 0 3.04706790123457 4.99681739026001 17.446 3.03858024691358 9.36960307452111 17.378 0 0 chimp,horse,human,macaque,marmoset,orangutan, processed_transcript processed_transcript A549@1.71788,AG04450@0.297892,BJ@0.3259,GM12878@0.268512,H1HESC@2.3674,HELAS3@2.18051,HEPG2@0.863721,HMEC@0,HSMM@0.085147,HUVEC@0.490931,K562@0.0273295,MCF7@0.746515,NHEK@0.004542,NHLF@0.0514495,SKNSHRA@0.813434, 0 0 0 0 ENSG00000250802.2 ENST00000514114.1 chr5:76383288-76447216 3 524 63400 intergenic 10.50 1 0,0,1 1 0,0,0 0 4.80616719242902 0 0 5.99460567823344 21.754 0 20.1059148264984 21.674 0 0 chimp,human,macaque,marmoset,orangutan,pig, processed_transcript processed_transcript A549@1.71788,AG04450@0.297892,BJ@0.3259,GM12878@0.268512,H1HESC@2.3674,HELAS3@2.18051,HEPG2@0.863721,HMEC@0,HSMM@0.085147,HUVEC@0.490931,K562@0.0273295,MCF7@0.746515,NHEK@0.004542,NHLF@0.0514495,SKNSHRA@0.813434, 0 0 0 0 ENSG00000250802.2 ENST00000513591.1 chr5:76383884-76444348 5 1732 58724 intergenic 3.05 0 0,1,1 0 0,0,0 0 5.18886656222328 0 0 6.44751719910088 23.188 0 21.5452796131054 23.132 0 0 chimp,horse,human,orangutan,panda, processed_transcript processed_transcript A549@1.71788,AG04450@0.297892,BJ@0.3259,GM12878@0.268512,H1HESC@2.3674,HELAS3@2.18051,HEPG2@0.863721,HMEC@0,HSMM@0.085147,HUVEC@0.490931,K562@0.0273295,MCF7@0.746515,NHEK@0.004542,NHLF@0.0514495,SKNSHRA@0.813434, 0 0 0 0 ENSG00000250802.2 ENST00000514288.1 chr5:76383905-76414200 4 572 29717 intergenic 3.05 0 0,1,0 0 0,0,0 0 6.85375374364842 0 0 4.12622404684187 23.188 0 8.44324797254097 23.132 0 1 human,macaque,orangutan, processed_transcript processed_transcript A549@1.71788,AG04450@0.297892,BJ@0.3259,GM12878@0.268512,H1HESC@2.3674,HELAS3@2.18051,HEPG2@0.863721,HMEC@0,HSMM@0.085147,HUVEC@0.490931,K562@0.0273295,MCF7@0.746515,NHEK@0.004542,NHLF@0.0514495,SKNSHRA@0.813434, 0 0 0 0 ENSG00000250802.2 ENST00000504506.1 chr5:76384100-76427032 6 696 42226 intergenic 5.86 0 0,0,0 0 0,0,0 0 4.82340264292142 0 0 5.35816795339364 9.332 0 10.2852507933501 9.334 1 1 chimp,human,macaque,marmoset,orangutan, processed_transcript processed_transcript A549@1.71788,AG04450@0.297892,BJ@0.3259,GM12878@0.268512,H1HESC@2.3674,HELAS3@2.18051,HEPG2@0.863721,HMEC@0,HSMM@0.085147,HUVEC@0.490931,K562@0.0273295,MCF7@0.746515,NHEK@0.004542,NHLF@0.0514495,SKNSHRA@0.813434, 0 0 0 0 ENSG00000250802.2 ENST00000507749.1 chr5:76384202-76435235 5 535 50490 intergenic 5.86 0 0,0,1 0 0,0,0 0 4.64747474747475 0 0 5.40253515547633 9.332 0 9.61578530402059 9.334 0 0 chimp,cow,human,macaque,marmoset,orangutan,panda,pig, processed_transcript processed_transcript A549@1.71788,AG04450@0.297892,BJ@0.3259,GM12878@0.268512,H1HESC@2.3674,HELAS3@2.18051,HEPG2@0.863721,HMEC@0,HSMM@0.085147,HUVEC@0.490931,K562@0.0273295,MCF7@0.746515,NHEK@0.004542,NHLF@0.0514495,SKNSHRA@0.813434, 0 0 0 0 ENSG00000250802.2 ENST00000513406.1 chr5:76414145-76443935 3 710 29076 intergenic 1.61 0 0,1,0 0 0,0,0 0 3.47496216811116 0 0 8.80468427569129 0 0 34.8850254505434 0 0 0 chimp,cow,human,macaque,marmoset,orangutan,panda, processed_transcript processed_transcript A549@1.71788,AG04450@0.297892,BJ@0.3259,GM12878@0.268512,H1HESC@2.3674,HELAS3@2.18051,HEPG2@0.863721,HMEC@0,HSMM@0.085147,HUVEC@0.490931,K562@0.0273295,MCF7@0.746515,NHEK@0.004542,NHLF@0.0514495,SKNSHRA@0.813434, 0 0 0 0 ENSG00000250802.2 ENST00000508401.1 chr5:76414147-76462734 3 579 48004 intergenic 0.34 1 0,1,1 0 0,0,0 0 5.78374718773436 0 0 9.57199400049996 0 0 26.3205982834764 0 0 0 chimp,human,macaque,marmoset,orangutan,panda, processed_transcript processed_transcript A549@1.71788,AG04450@0.297892,BJ@0.3259,GM12878@0.268512,H1HESC@2.3674,HELAS3@2.18051,HEPG2@0.863721,HMEC@0,HSMM@0.085147,HUVEC@0.490931,K562@0.0273295,MCF7@0.746515,NHEK@0.004542,NHLF@0.0514495,SKNSHRA@0.813434, 0 0 0 0 ENSG00000250802.2 ENST00000511547.1 chr5:76435074-76442447 2 573 6798 intergenic -6.09 0 0,0,0 0 0,0,0 0 10.3059723448073 0 0 15.5707561047367 25.747 94.5689354275742 19.872756693145 25.968 0 0 chimp,dog,guinea_pig,human,macaque,marmoset,mouse,orangutan,rabbit,rat, processed_transcript processed_transcript A549@1.71788,AG04450@0.297892,BJ@0.3259,GM12878@0.268512,H1HESC@2.3674,HELAS3@2.18051,HEPG2@0.863721,HMEC@0,HSMM@0.085147,HUVEC@0.490931,K562@0.0273295,MCF7@0.746515,NHEK@0.004542,NHLF@0.0514495,SKNSHRA@0.813434, 0 0 0 0 ENSG00000250802.2 ENST00000515356.2 chr5:76435074-76444348 3 1984 7286 intergenic 7.21 0 0,0,1 0 0,0,0 0 9.61570134504529 0 0 14.5278616524842 25.747 208.596774193548 50.1345045292341 25.968 1 1 chimp,human,macaque,marmoset,orangutan, processed_transcript processed_transcript A549@1.71788,AG04450@0.297892,BJ@0.3259,GM12878@0.268512,H1HESC@2.3674,HELAS3@2.18051,HEPG2@0.863721,HMEC@0,HSMM@0.085147,HUVEC@0.490931,K562@0.0273295,MCF7@0.746515,NHEK@0.004542,NHLF@0.0514495,SKNSHRA@0.813434, 0 0 0 0 ENSG00000253572.1 ENST00000523413.1 chr5:77238589-77242248 2 698 2959 intergenic -4.59 0 0,0,0 0 0,0,0 75.1518624641834 0 524.666 69.3223495702006 0 591.993 114.504297994269 1.23183507941872 605.43 0 0 chimp,cow,dog,elephant,horse,human,macaque,marmoset,mouse,orangutan,panda, lincRNA lincRNA A549@0.009636,AG04450@0,BJ@0,GM12878@0.011519,H1HESC@0,HELAS3@0.017889,HEPG2@0.01852,HMEC@0.005849,HSMM@0.006513,HUVEC@0,K562@0,MCF7@0.254433,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000245556.2 ENST00000513755.1 chr5:77638189-77656217 3 490 17534 intergenic 2.32 0 0,1,0 1 0,0,0 0 1.5 184.668 0 3.47102771757728 132.888 0 5.41148625527547 145.194 0 1 chimp,human, lincRNA processed_transcript A549@1.88352,AG04450@0.733351,BJ@0.613173,GM12878@2.04495,H1HESC@1.05487,HELAS3@2.6475,HEPG2@1.49446,HMEC@0.68659,HSMM@0.732031,HUVEC@0.477318,K562@2.57703,MCF7@2.3756,NHEK@0.808515,NHLF@0.932752,SKNSHRA@2.64312, 0 0 0 0 ENSG00000245556.2 ENST00000421004.3 chr5:77654625-77656331 2 1477 227 intergenic 2.49 1 1,1,1 1 0,0,0 0 0 190.124 7.1354096140826 19.4537444933921 134.189 7.56601218686527 19.5947136563877 147.112 0 1 chimp,human,macaque,orangutan, lincRNA processed_transcript A549@1.88352,AG04450@0.733351,BJ@0.613173,GM12878@2.04495,H1HESC@1.05487,HELAS3@2.6475,HEPG2@1.49446,HMEC@0.68659,HSMM@0.732031,HUVEC@0.477318,K562@2.57703,MCF7@2.3756,NHEK@0.808515,NHLF@0.932752,SKNSHRA@2.64312, 0 0 0 0 ENSG00000085365.12 ENST00000538629.1 chr5:77656339-77776562 9 6236 113971 intergenic 18.90 0 0,1,1 1 0,1,1 174.182007697242 2.73909152328224 0.438 161.849903784477 2.2558545594932 11.506 176.885182809493 5.3695062779128 12.029 0 0 cat,chimp,dog,elephant,guinea_pig,horse,human,macaque,marmoset,opossum,orangutan,panda,pig, antisense antisense A549@19.7042,AG04450@16.0345,BJ@13.8047,GM12878@12.7339,H1HESC@16.6189,HELAS3@20.496,HEPG2@10.3308,HMEC@13.9868,HSMM@10.4537,HUVEC@10.9312,K562@14.1294,MCF7@12.0828,NHEK@18.1126,NHLF@13.775,SKNSHRA@17.7872, 0 0 0 0 ENSG00000085365.12 ENST00000339292.4 chr5:77656407-77774894 9 4499 113972 intergenic 5.23 0 0,1,0 1 0,1,1 234.717715047788 2.7427526059032 30.222 214.190486774839 2.25989716772541 52.646 235.981551455879 5.37390762643456 52.897 0 0 cat,chimp,cow,dog,elephant,guinea_pig,horse,human,macaque,marmoset,mouse,opossum,orangutan,panda,pig,rabbit,rat, antisense antisense A549@19.7042,AG04450@16.0345,BJ@13.8047,GM12878@12.7339,H1HESC@16.6189,HELAS3@20.496,HEPG2@10.3308,HMEC@13.9868,HSMM@10.4537,HUVEC@10.9312,K562@14.1294,MCF7@12.0828,NHEK@18.1126,NHLF@13.775,SKNSHRA@17.7872, 0 0 0 0 ENSG00000085365.12 ENST00000508271.2 chr5:77656435-77771838 8 1339 114050 intergenic 5.23 0 1,1,1 1 0,1,1 503.14787154593 3.01357299430075 42.486 489.041822255415 2.64773345024112 69.586 545.713218820015 5.72962735642262 69.725 0 0 chimp,cow,dog,elephant,guinea_pig,horse,human,macaque,marmoset,mouse,opossum,orangutan,panda,pig,rabbit,rat, antisense antisense A549@19.7042,AG04450@16.0345,BJ@13.8047,GM12878@12.7339,H1HESC@16.6189,HELAS3@20.496,HEPG2@10.3308,HMEC@13.9868,HSMM@10.4537,HUVEC@10.9312,K562@14.1294,MCF7@12.0828,NHEK@18.1126,NHLF@13.775,SKNSHRA@17.7872, 0 0 0 0 ENSG00000085365.12 ENST00000508822.1 chr5:77656435-77771849 8 1349 114051 intergenic 5.23 0 1,1,1 1 0,1,1 504.097108969607 3.01722913433464 42.486 485.073387694589 2.65176982227249 69.586 541.292068198666 5.73402249870672 69.725 0 0 chimp,cow,dog,elephant,guinea_pig,horse,human,macaque,marmoset,mouse,opossum,orangutan,panda,pig,rabbit,rat, antisense antisense A549@19.7042,AG04450@16.0345,BJ@13.8047,GM12878@12.7339,H1HESC@16.6189,HELAS3@20.496,HEPG2@10.3308,HMEC@13.9868,HSMM@10.4537,HUVEC@10.9312,K562@14.1294,MCF7@12.0828,NHEK@18.1126,NHLF@13.775,SKNSHRA@17.7872, 0 0 0 0 ENSG00000085365.12 ENST00000509998.1 chr5:77656435-77771849 8 1267 114133 intergenic 5.23 0 1,1,1 1 0,1,1 499.604577742699 3.4286840791007 42.486 481.212312549329 3.04119755022649 69.586 541.606945540647 6.11602253511255 69.725 0 0 cat,chimp,cow,dog,elephant,guinea_pig,horse,human,macaque,marmoset,mouse,opossum,orangutan,panda,pig,rabbit,rat, antisense antisense A549@19.7042,AG04450@16.0345,BJ@13.8047,GM12878@12.7339,H1HESC@16.6189,HELAS3@20.496,HEPG2@10.3308,HMEC@13.9868,HSMM@10.4537,HUVEC@10.9312,K562@14.1294,MCF7@12.0828,NHEK@18.1126,NHLF@13.775,SKNSHRA@17.7872, 0 0 0 0 ENSG00000085365.12 ENST00000511551.1 chr5:77656452-77712459 5 554 55445 intergenic 8.68 0 1,1,1 1 0,1,1 279.037906137184 4.38194607268464 49.932 352.236462093863 2.96589412931734 75.031 387.312274368231 7.93249165840021 79.942 0 0 chimp,cow,dog,elephant,guinea_pig,horse,human,macaque,marmoset,mouse,opossum,orangutan,panda,pig,rat, antisense antisense A549@19.7042,AG04450@16.0345,BJ@13.8047,GM12878@12.7339,H1HESC@16.6189,HELAS3@20.496,HEPG2@10.3308,HMEC@13.9868,HSMM@10.4537,HUVEC@10.9312,K562@14.1294,MCF7@12.0828,NHEK@18.1126,NHLF@13.775,SKNSHRA@17.7872, 0 0 0 0 ENSG00000085365.12 ENST00000502681.2 chr5:77656457-77771636 7 957 114210 intergenic 5.23 0 1,1,1 1 0,1,1 492.30407523511 3.62420103318448 52.122 487.417972831766 3.53032133788635 75.031 509.312434691745 6.76569477278697 82.947 0 0 cat,chimp,cow,dog,elephant,guinea_pig,horse,human,macaque,marmoset,mouse,opossum,orangutan,panda,pig,rabbit,rat, antisense antisense A549@19.7042,AG04450@16.0345,BJ@13.8047,GM12878@12.7339,H1HESC@16.6189,HELAS3@20.496,HEPG2@10.3308,HMEC@13.9868,HSMM@10.4537,HUVEC@10.9312,K562@14.1294,MCF7@12.0828,NHEK@18.1126,NHLF@13.775,SKNSHRA@17.7872, 0 0 0 0 ENSG00000085365.12 ENST00000510030.1 chr5:77656629-77712412 4 473 55304 intergenic 0.40 0 0,1,1 0 0,1,1 192.786469344609 4.04464414870534 113.88 271.30866807611 2.82418993201215 122.266 281.577167019027 7.90443729205844 134.018 0 0 chimp,cow,dog,human,marmoset,orangutan,panda, antisense antisense A549@19.7042,AG04450@16.0345,BJ@13.8047,GM12878@12.7339,H1HESC@16.6189,HELAS3@20.496,HEPG2@10.3308,HMEC@13.9868,HSMM@10.4537,HUVEC@10.9312,K562@14.1294,MCF7@12.0828,NHEK@18.1126,NHLF@13.775,SKNSHRA@17.7872, 0 0 0 0 ENSG00000085365.12 ENST00000320280.7 chr5:77712427-77774638 5 3761 58442 intergenic 5.23 0 0,0,1 0 0,1,1 227.051847912789 1.90893535471065 37.947 189.48763626695 2.48458300537285 57.424 209.420101036958 3.88963416720851 62.324 0 0 cat,chimp,cow,dog,elephant,guinea_pig,horse,human,macaque,marmoset,mouse,opossum,orangutan,panda,pig,rabbit,rat, antisense antisense A549@19.7042,AG04450@16.0345,BJ@13.8047,GM12878@12.7339,H1HESC@16.6189,HELAS3@20.496,HEPG2@10.3308,HMEC@13.9868,HSMM@10.4537,HUVEC@10.9312,K562@14.1294,MCF7@12.0828,NHEK@18.1126,NHLF@13.775,SKNSHRA@17.7872, 0 0 0 0 ENSG00000085365.12 ENST00000506858.1 chr5:77753616-77772652 3 1600 17432 intergenic 5.23 0 0,0,1 0 0,1,1 342.175625 0.876319412574575 0 262.848125 2.26525929325379 0 243.249375 3.19642037631941 0 0 0 cat,chimp,cow,dog,elephant,guinea_pig,horse,human,macaque,marmoset,mouse,opossum,orangutan,panda,pig,rabbit,rat, antisense antisense A549@19.7042,AG04450@16.0345,BJ@13.8047,GM12878@12.7339,H1HESC@16.6189,HELAS3@20.496,HEPG2@10.3308,HMEC@13.9868,HSMM@10.4537,HUVEC@10.9312,K562@14.1294,MCF7@12.0828,NHEK@18.1126,NHLF@13.775,SKNSHRA@17.7872, 0 0 0 0 ENSG00000250258.1 ENST00000421252.2 chr5:79070171-79112013 5 455 41379 intronic 2.20 0 0,0,0 0 0,0,0 122.857142857143 18.646801517678 0 154.575824175824 21.0965465574325 0 167.421978021978 21.2843229657556 0 0 0 cat,chimp,dog,horse,human,macaque,marmoset,mouse,orangutan,panda, antisense antisense A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0.033385,HELAS3@0.024729,HEPG2@0,HMEC@0,HSMM@0.008946,HUVEC@0,K562@0,MCF7@0.0087415,NHEK@0,NHLF@0,SKNSHRA@0.0098645, 0 0 0 0 ENSG00000250888.1 ENST00000503167.1 chr5:79232402-79263449 3 558 30485 intergenic -1.95 0 0,0,0 0 0,0,0 91.2096774193548 19.243693619813 12.428 21.9659498207885 10.9381663113006 8.531 22.6200716845878 11.4774479252091 6.251 0 0 chimp,elephant,horse,human,macaque,orangutan,pig, antisense antisense A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000249825.1 ENST00000503007.1 chr5:79348197-79378227 4 952 29072 intronic 3.83 0 0,0,0 0 0,0,0 0.882352941176471 34.2700192625206 107.251 0.607142857142857 47.5672468354431 142.44 0.804621848739496 50.0815217391304 147.453 0 0 chimp,horse,human,marmoset,orangutan,panda, antisense antisense A549@0.0123805,AG04450@0.001699,BJ@0.006683,GM12878@0.042851,H1HESC@0.020844,HELAS3@0.001543,HEPG2@0.0136225,HMEC@0.004541,HSMM@0.0075075,HUVEC@0.000899,K562@0.0048175,MCF7@0.0264845,NHEK@0.0393837,NHLF@0.0007215,SKNSHRA@0.029231, 0 0 0 0 ENSG00000249825.1 ENST00000514042.1 chr5:79362172-79379477 8 2697 14594 exonic 4.42 1 0,0,0 0 0,0,0 21.0233592880979 46.6928874880088 0 21.5105672969967 67.2439358640537 6.822 23.9925843529848 70.1390982595587 6.768 0 1 chimp,human,orangutan, antisense antisense A549@0.0123805,AG04450@0.001699,BJ@0.006683,GM12878@0.042851,H1HESC@0.020844,HELAS3@0.001543,HEPG2@0.0136225,HMEC@0.004541,HSMM@0.0075075,HUVEC@0.000899,K562@0.0048175,MCF7@0.0264845,NHEK@0.0393837,NHLF@0.0007215,SKNSHRA@0.029231, 0 0 0 0 ENSG00000251675.1 ENST00000511484.1 chr5:79424184-79439706 3 661 14857 exonic 12.16 0 0,0,0 0 0,0,0 25.8971255673222 6.25247358147675 0 76.9485627836611 8.86571986269099 0 95.5431164901664 9.8783738305176 0 0 0 chimp,cow,horse,human,macaque,orangutan,pig, antisense antisense A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0.0044755,HELAS3@0,HEPG2@0.0414175,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000249042.1 ENST00000508000.1 chr5:79778112-79783772 3 1148 4508 intergenic 4.31 0 1,1,1 1 0,0,0 0 0 0 0 0 6.749 0 1.34760425909494 7.042 0 1 human,macaque,orangutan, antisense antisense A549@1.02606,AG04450@1.46561,BJ@1.13946,GM12878@0.01167,H1HESC@0.471672,HELAS3@3.31752,HEPG2@1.31712,HMEC@1.14185,HSMM@0.403386,HUVEC@0.244122,K562@0.0083225,MCF7@2.49514,NHEK@0.938411,NHLF@1.28509,SKNSHRA@1.25012, 0 0 0 0 ENSG00000249042.1 ENST00000504300.1 chr5:79778531-79783882 3 834 4513 exonic 3.76 0 0,1,1 1 0,0,0 0 0 0 0 0 6.749 0 1.34611123421228 7.042 1 1 chimp,human,macaque,marmoset,orangutan, antisense antisense A549@1.02606,AG04450@1.46561,BJ@1.13946,GM12878@0.01167,H1HESC@0.471672,HELAS3@3.31752,HEPG2@1.31712,HMEC@1.14185,HSMM@0.403386,HUVEC@0.244122,K562@0.0083225,MCF7@2.49514,NHEK@0.938411,NHLF@1.28509,SKNSHRA@1.25012, 0 0 0 0 ENSG00000251221.1 ENST00000515871.1 chr5:79904442-79918343 2 438 13461 intergenic 0 0 0,0,1 0 0,0,0 0 2.04680187207488 0 0 6.84295371814873 2.151 0 8.36616893247158 2.187 0 0 human,macaque,orangutan,panda, lincRNA lincRNA A549@0.17909,AG04450@0.054467,BJ@0.0164995,GM12878@0.30624,H1HESC@0.018859,HELAS3@0.366556,HEPG2@0.076705,HMEC@0.037224,HSMM@0.0404375,HUVEC@0.025817,K562@0.122375,MCF7@0.0829725,NHEK@0.032568,NHLF@0.0044345,SKNSHRA@0.0154695, 0 0 0 0 ENSG00000249655.1 ENST00000514201.1 chr5:79926132-79927409 2 547 728 intronic -1.64 0 0,0,0 0 0,0,0 0 0 0 0 10.0851648351648 8.289 0 7.47115384615385 8.353 0 1 chimp,human,macaque,orangutan, antisense antisense A549@0.2215,AG04450@0.029809,BJ@0.0569245,GM12878@0.379918,H1HESC@0.55977,HELAS3@1.04364,HEPG2@0.615249,HMEC@0.010449,HSMM@0,HUVEC@0.118836,K562@0.607039,MCF7@0.251084,NHEK@0.033444,NHLF@0.0082945,SKNSHRA@0.08774, 0 0 0 0 ENSG00000251450.1 ENST00000505694.1 chr5:80243516-80256726 4 531 12673 exonic 2.25 0 1,1,1 0 0,0,0 122.677966101695 7.72729424761304 64.625 151.389830508475 7.50903495620611 70.264 174.406779661017 10.1218338199321 86.619 0 0 chimp,dog,elephant,human,macaque,marmoset,orangutan,panda,platypus, antisense antisense A549@0.0092205,AG04450@0.065894,BJ@0,GM12878@0,H1HESC@0.0317675,HELAS3@0,HEPG2@0.028853,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0.0202465,SKNSHRA@0, 0 0 0 0 ENSG00000251450.1 ENST00000505107.1 chr5:80246948-80248799 2 663 1186 intergenic 4.32 0 0,0,0 0 0,0,0 0 0 0 0 0 0 0 0 0 0 1 chimp,human,marmoset,orangutan, antisense antisense A549@0.0092205,AG04450@0.065894,BJ@0,GM12878@0,H1HESC@0.0317675,HELAS3@0,HEPG2@0.028853,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0.0202465,SKNSHRA@0, 0 0 0 0 ENSG00000249772.1 ENST00000508993.1 chr5:80409204-80410671 2 553 912 exonic 3.34 0 0,0,0 0 0,0,0 145.584086799277 0 0 218.043399638336 10.2521929824561 32.46 267.607594936709 17.0416666666667 35.845 0 0 cat,chimp,cow,dog,elephant,horse,human,macaque,marmoset,mouse,opossum,orangutan,panda,pig,platypus,rat, antisense antisense A549@0.0149305,AG04450@0.040914,BJ@0.008872,GM12878@0.012079,H1HESC@0.005244,HELAS3@0,HEPG2@0.0268725,HMEC@0,HSMM@0.007415,HUVEC@0,K562@0,MCF7@0.0148185,NHEK@0,NHLF@0.0035155,SKNSHRA@0.0930335, 0 0 0 0 ENSG00000247572.2 ENST00000503483.1 chr5:80499915-80597304 3 557 96828 exonic -2.95 0 0,1,0 1 0,0,0 71.2315978456014 13.1927851447928 0 71.7684021543986 14.6845127442475 13.351 85.0053859964093 19.5074565208411 13.353 0 0 cat,chimp,dog,elephant,guinea_pig,human,macaque,marmoset,mouse,opossum,orangutan,panda,pig,rat, processed_transcript processed_transcript A549@2.15431,AG04450@1.80193,BJ@1.10858,GM12878@0.715691,H1HESC@2.02867,HELAS3@2.05099,HEPG2@1.25996,HMEC@0.417077,HSMM@0.803723,HUVEC@1.02039,K562@1.93485,MCF7@2.1462,NHEK@0.842224,NHLF@1.28163,SKNSHRA@2.81966, 0 0 0 0 ENSG00000247572.2 ENST00000511495.1 chr5:80505920-80597316 4 581 90809 exonic 3.25 0 0,1,0 1 0,0,0 68.289156626506 13.5689964651081 0 68.8037865748709 14.2951359446751 13.351 81.4939759036145 19.0788578224625 13.353 0 0 chimp,human,macaque,marmoset,orangutan,pig,platypus, processed_transcript processed_transcript A549@2.15431,AG04450@1.80193,BJ@1.10858,GM12878@0.715691,H1HESC@2.02867,HELAS3@2.05099,HEPG2@1.25996,HMEC@0.417077,HSMM@0.803723,HUVEC@1.02039,K562@1.93485,MCF7@2.1462,NHEK@0.842224,NHLF@1.28163,SKNSHRA@2.81966, 0 0 0 0 ENSG00000247572.2 ENST00000512287.1 chr5:80531578-80597342 2 599 65163 intronic 3.25 0 1,1,1 1 0,0,0 0 8.49106087810567 0 0 12.1344014241211 13.351 0 17.7363534521124 13.353 0 0 dog,horse,human,macaque,marmoset,orangutan,pig, processed_transcript processed_transcript A549@2.15431,AG04450@1.80193,BJ@1.10858,GM12878@0.715691,H1HESC@2.02867,HELAS3@2.05099,HEPG2@1.25996,HMEC@0.417077,HSMM@0.803723,HUVEC@1.02039,K562@1.93485,MCF7@2.1462,NHEK@0.842224,NHLF@1.28163,SKNSHRA@2.81966, 0 0 0 0 ENSG00000247572.2 ENST00000500148.2 chr5:80533384-80597363 4 2220 61753 intronic 4.83 0 1,1,1 1 0,0,0 12.272972972973 8.5148575777695 0 0 12.7782293977621 13.351 1.97027027027027 18.6012015610578 13.353 0 1 chimp,human,macaque,orangutan, processed_transcript processed_transcript A549@2.15431,AG04450@1.80193,BJ@1.10858,GM12878@0.715691,H1HESC@2.02867,HELAS3@2.05099,HEPG2@1.25996,HMEC@0.417077,HSMM@0.803723,HUVEC@1.02039,K562@1.93485,MCF7@2.1462,NHEK@0.842224,NHLF@1.28163,SKNSHRA@2.81966, 0 0 0 0 ENSG00000247572.2 ENST00000502041.2 chr5:80533384-80597378 2 2067 61925 intronic 4.83 0 1,1,1 1 0,0,0 13.1814223512337 8.4912071053694 0 0 12.7427371820751 13.351 2.11611030478955 18.5495357287041 13.353 0 1 chimp,human,macaque,orangutan, processed_transcript processed_transcript A549@2.15431,AG04450@1.80193,BJ@1.10858,GM12878@0.715691,H1HESC@2.02867,HELAS3@2.05099,HEPG2@1.25996,HMEC@0.417077,HSMM@0.803723,HUVEC@1.02039,K562@1.93485,MCF7@2.1462,NHEK@0.842224,NHLF@1.28163,SKNSHRA@2.81966, 0 0 0 0 ENSG00000247572.2 ENST00000501927.2 chr5:80533647-80597374 3 2460 61263 intronic 4.83 0 1,1,1 1 0,0,0 10.589837398374 8.60246804759806 0 0 12.8804335406363 13.351 8.51626016260163 18.4794084520836 13.353 0 1 chimp,human,macaque, processed_transcript processed_transcript A549@2.15431,AG04450@1.80193,BJ@1.10858,GM12878@0.715691,H1HESC@2.02867,HELAS3@2.05099,HEPG2@1.25996,HMEC@0.417077,HSMM@0.803723,HUVEC@1.02039,K562@1.93485,MCF7@2.1462,NHEK@0.842224,NHLF@1.28163,SKNSHRA@2.81966, 0 0 0 0 ENSG00000247572.2 ENST00000505295.1 chr5:80540677-80597379 3 906 55792 intronic 3.25 0 1,1,1 1 0,0,0 0 9.31323487238314 0 0 13.751326355033 13.351 18.2958057395143 15.4034628620591 13.353 1 1 chimp,human,macaque,marmoset,orangutan, processed_transcript processed_transcript A549@2.15431,AG04450@1.80193,BJ@1.10858,GM12878@0.715691,H1HESC@2.02867,HELAS3@2.05099,HEPG2@1.25996,HMEC@0.417077,HSMM@0.803723,HUVEC@1.02039,K562@1.93485,MCF7@2.1462,NHEK@0.842224,NHLF@1.28163,SKNSHRA@2.81966, 0 0 0 0 ENSG00000249483.1 ENST00000512859.1 chr5:81147420-81148020 1 600 0 intergenic 0.02 0 0,1,1 0 0,0,0 699 0 215.334 699.226666666667 0 142.737 704.198333333333 0 157.181 0 0 cat,chimp,cow,elephant,horse,human,macaque,marmoset,mouse,opossum,orangutan,panda,pig,rat, lincRNA lincRNA A549@0,AG04450@0,BJ@0.021538,GM12878@0.034849,H1HESC@0.0069035,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0.0090705,MCF7@0.020223,NHEK@0,NHLF@0,SKNSHRA@0.0188755, 0 0 0 0 ENSG00000236447.2 ENST00000396880.3 chr5:81287814-81288300 1 486 0 intronic -0.84 0 0,0,0 0 0,0,0 0 0 0 0 0 2.232 0 0 2.259 1 1 chimp,human,macaque,marmoset,orangutan, sense_intronic sense_intronic A549@0.341215,AG04450@0.0994705,BJ@0.0658815,GM12878@0.133814,H1HESC@0.363027,HELAS3@0.266505,HEPG2@0.292993,HMEC@0,HSMM@0,HUVEC@0.0890035,K562@0.055121,MCF7@0.126205,NHEK@0.0279563,NHLF@0,SKNSHRA@0.129716, 0 0 0 0 ENSG00000248192.1 ENST00000504846.1 chr5:81368874-81369521 1 647 0 intronic -1.38 0 0,0,0 0 0,0,0 0 0 0 5.60278207109737 0 32.398 1.87789799072643 0 29.32 0 0 chimp,human,macaque,marmoset,orangutan,panda, antisense antisense A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000248393.1 ENST00000512952.1 chr5:81841681-81842129 1 448 0 intergenic -5.74 0 0,0,0 0 0,0,0 0 0 9.02 0 0 3.562 0 0 7.369 0 0 chimp,cow,dog,elephant,horse,human,macaque,marmoset,mouse,orangutan,panda,pig,rat, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000248870.1 ENST00000510845.1 chr5:81882595-81883230 1 635 0 intergenic -0.27 0 0,0,0 0 0,0,0 20.2834645669291 0 0 72.3275590551181 0 0 77.0866141732283 0 0 0 0 cat,chimp,cow,dog,elephant,guinea_pig,horse,human,macaque,marmoset,orangutan,panda,pig, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0.0083505,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000249100.1 ENST00000509506.1 chr5:82061223-82062152 1 929 0 intergenic -3.70 0 0,0,0 0 0,0,0 0 0 0 0 0 0 0 0 0 0 0 cat,chimp,cow,dog,elephant,guinea_pig,human,macaque,marmoset,mouse,opossum,orangutan,panda,rat, lincRNA lincRNA A549@0,AG04450@0.012733,BJ@0,GM12878@0.017132,H1HESC@0.313047,HELAS3@0.0089765,HEPG2@0.025203,HMEC@0,HSMM@0,HUVEC@0,K562@0.196835,MCF7@0.0172945,NHEK@0.00991633,NHLF@0,SKNSHRA@0.062405, 0 0 0 0 ENSG00000248112.1 ENST00000504916.1 chr5:82215195-82216938 2 743 998 intergenic 4.49 0 0,0,0 0 0,0,0 21.043068640646 0 0 35.4508748317631 6.87875751503006 0 53.0269179004038 7.1813627254509 4.769 0 0 cat,chimp,cow,dog,elephant,guinea_pig,horse,human,macaque,marmoset,mouse,opossum,orangutan,panda,rabbit,rat, lincRNA lincRNA A549@0.013242,AG04450@0,BJ@0.0132185,GM12878@0.008558,H1HESC@0.006643,HELAS3@0,HEPG2@0.052568,HMEC@0,HSMM@0.002762,HUVEC@0,K562@0.0443335,MCF7@0.016192,NHEK@0,NHLF@0,SKNSHRA@0.139925, 0 0 0 0 ENSG00000249857.1 ENST00000504382.1 chr5:82236277-82236802 1 525 0 intergenic -1.27 0 0,0,0 0 0,0,0 0 0 0 0 0 0 0 0 0 1 1 chimp,human,macaque,marmoset,orangutan, lincRNA lincRNA A549@0,AG04450@0.081807,BJ@0,GM12878@0.086911,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0.0547305,MCF7@0,NHEK@0.002427,NHLF@0,SKNSHRA@0.419657, 0 0 0 0 ENSG00000249664.1 ENST00000514840.1 chr5:82308104-82308928 1 824 0 intergenic -2.54 0 0,0,0 0 0,0,0 0 0 0 0 0 20.523 0 0 29.917 0 0 cat,chimp,cow,dog,elephant,guinea_pig,horse,human,macaque,marmoset,mouse,orangutan,panda,pig,rabbit,rat, lincRNA lincRNA A549@0.053858,AG04450@0.017115,BJ@0.0058665,GM12878@0.04833,H1HESC@0.0108065,HELAS3@0,HEPG2@0.0052745,HMEC@0,HSMM@0.0149645,HUVEC@0.0071835,K562@0.0737145,MCF7@0.0296305,NHEK@0.0332763,NHLF@0.0093555,SKNSHRA@0.13923, 0 0 0 0 ENSG00000249835.2 ENST00000512090.1 chr5:82827171-82858133 3 421 30537 intronic -6.17 0 0,0,0 0 0,0,0 0 40.9309689884403 147.384 38.5439429928741 52.5207780725022 126.462 54.1686460807601 51.5682287061598 152.889 0 0 cat,chimp,cow,dog,elephant,guinea_pig,horse,human,macaque,marmoset,mouse,orangutan,panda,pig,rabbit,rat, antisense antisense A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000249835.2 ENST00000513899.1 chr5:82837296-82877139 2 451 39390 exonic -3.60 0 0,1,0 0 0,0,0 187.50332594235 37.5483625285606 355.887 250.753880266075 47.5017009393247 284.316 309.654101995565 48.1450875856816 293.448 0 0 cat,chimp,cow,dog,elephant,guinea_pig,horse,human,macaque,marmoset,mouse,orangutan,panda,pig,platypus,rabbit,rat, antisense antisense A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000250320.1 ENST00000514696.1 chr5:83680245-83695469 3 579 14641 exonic -3.06 0 0,1,0 1 0,0,0 0 8.17232429478861 13.489 6.60621761658031 7.2037429137354 15.879 8.49913644214162 7.84495594563213 18.128 0 0 chimp,horse,human,macaque,marmoset,orangutan,pig, antisense antisense A549@0,AG04450@0.138415,BJ@0.0303355,GM12878@0,H1HESC@0.377004,HELAS3@0.012702,HEPG2@0,HMEC@0,HSMM@0.542899,HUVEC@0.0469475,K562@0,MCF7@0,NHEK@0.00438667,NHLF@0.250736,SKNSHRA@0.309826, 0 0 0 0 ENSG00000250320.1 ENST00000509406.1 chr5:83680311-83786583 5 561 105703 exonic -0.95 0 0,1,0 1 0,0,0 0 4.2193031418219 13.489 6.81818181818182 5.52104481424368 15.879 8.77183600713012 6.32308449145247 18.128 0 0 chimp,horse,human,macaque,marmoset,orangutan, antisense antisense A549@0,AG04450@0.138415,BJ@0.0303355,GM12878@0,H1HESC@0.377004,HELAS3@0.012702,HEPG2@0,HMEC@0,HSMM@0.542899,HUVEC@0.0469475,K562@0,MCF7@0,NHEK@0.00438667,NHLF@0.250736,SKNSHRA@0.309826, 0 0 0 0 ENSG00000250320.1 ENST00000515688.1 chr5:83680374-83713134 4 261 32493 exonic -4.03 0 0,1,0 1 0,0,0 0 5.09512818145447 13.489 0 6.0587511156249 17.604 0 7.23106515249439 20.921 0 0 NA antisense antisense A549@0,AG04450@0.138415,BJ@0.0303355,GM12878@0,H1HESC@0.377004,HELAS3@0.012702,HEPG2@0,HMEC@0,HSMM@0.542899,HUVEC@0.0469475,K562@0,MCF7@0,NHEK@0.00438667,NHLF@0.250736,SKNSHRA@0.309826, 0 0 0 0 ENSG00000250320.1 ENST00000507060.1 chr5:83680665-83683875 5 547 2655 intergenic -0.95 1 0,1,1 0 0,0,0 43.2614259597806 19.2587570621469 25.149 16.2815356489945 14.5593220338983 27.918 22.6106032906764 14.3333333333333 30.425 1 1 chimp,human,macaque,marmoset,orangutan, antisense antisense A549@0,AG04450@0.138415,BJ@0.0303355,GM12878@0,H1HESC@0.377004,HELAS3@0.012702,HEPG2@0,HMEC@0,HSMM@0.542899,HUVEC@0.0469475,K562@0,MCF7@0,NHEK@0.00438667,NHLF@0.250736,SKNSHRA@0.309826, 0 0 0 0 ENSG00000250320.1 ENST00000502253.1 chr5:83681297-83696600 5 787 14508 intergenic -0.95 1 0,0,0 0 0,0,0 51.7509529860229 2.15749931072512 47.05 1.19695044472681 4.0082023711056 52.613 11.5705209656925 4.50551419906259 56.106 0 0 chimp,cow,dog,guinea_pig,human,macaque,marmoset,orangutan,rabbit,rat, antisense antisense A549@0,AG04450@0.138415,BJ@0.0303355,GM12878@0,H1HESC@0.377004,HELAS3@0.012702,HEPG2@0,HMEC@0,HSMM@0.542899,HUVEC@0.0469475,K562@0,MCF7@0,NHEK@0.00438667,NHLF@0.250736,SKNSHRA@0.309826, 0 0 0 0 ENSG00000249349.1 ENST00000446516.2 chr5:84408160-84408574 1 414 0 intergenic -8.59 0 0,0,0 0 0,0,0 0 0 14.384 0 0 90.308 0 0 131.168 0 1 chimp,human,macaque,orangutan, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 2 44 0 0 ENSG00000249792.1 ENST00000510049.1 chr5:84508776-84509432 1 656 0 intergenic -6.44 0 0,0,0 0 0,0,0 0 0 0 0 0 0 0 0 0 1 1 chimp,human,macaque,marmoset,orangutan, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0.0080835,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000248667.1 ENST00000511793.1 chr5:84715846-84716269 1 423 0 intergenic -4.70 0 0,0,0 0 0,0,0 0 0 0 0 0 0 0 0 0 0 0 NA lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0.546924,H1HESC@0.014018,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@1.03223,MCF7@0.0094835,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000249023.1 ENST00000505572.1 chr5:84725520-84726002 1 482 0 intergenic -4.51 0 0,0,0 0 0,0,0 0 0 0 0 0 0 13.1016597510373 0 0 0 0 cat,chimp,cow,dog,elephant,guinea_pig,horse,human,macaque,marmoset,opossum,orangutan,panda,pig,rabbit,rat, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000249842.1 ENST00000511602.1 chr5:84742792-84743576 1 784 0 intergenic -7.16 0 0,0,1 0 0,0,0 0 0 0 0 0 0 0 0 0 0 0 chimp,horse,human,macaque,orangutan,rabbit, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000250874.1 ENST00000507387.1 chr5:84959050-84960502 1 1452 0 intergenic -6.86 0 0,1,0 0 0,0,0 0 0 0 3.78581267217631 0 0 1.27754820936639 0 0 0 0 chimp,dog,horse,human,macaque,marmoset,orangutan,panda, lincRNA lincRNA A549@0.0089635,AG04450@0,BJ@0,GM12878@0.122886,H1HESC@0.0040905,HELAS3@0.531184,HEPG2@0.108884,HMEC@0,HSMM@0,HUVEC@0,K562@1.14515,MCF7@0.116508,NHEK@0,NHLF@0,SKNSHRA@1.11299, 0 0 0 0 ENSG00000249153.1 ENST00000504046.1 chr5:85144320-85145017 1 697 0 intergenic -14.09 0 0,1,0 0 0,0,0 0 0 0 0 0 0 0 0 0 0 0 chimp,horse,human,macaque,marmoset,orangutan,pig, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0.006697,HEPG2@0.0195395,HMEC@0,HSMM@0,HUVEC@0,K562@0.019317,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0.003256, 0 0 0 0 ENSG00000248195.1 ENST00000505348.1 chr5:85630842-85631626 1 784 0 intergenic -2.49 0 0,0,1 0 0,0,0 0 0 0 0 0 0 0 0 3.919 0 0 chimp,dog,elephant,guinea_pig,horse,human,macaque,marmoset,mouse,opossum,orangutan,panda,pig,rabbit,rat, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000248363.1 ENST00000510946.1 chr5:85649621-85664671 3 554 14492 intergenic -3.98 0 0,0,0 0 0,0,0 0 0 0 0 7.20569969638421 0 0 7.42188793817278 0 0 0 chimp,dog,horse,human,macaque,marmoset,orangutan,panda, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000248363.1 ENST00000511940.1 chr5:85649621-85664672 3 578 14469 intergenic -3.98 0 0,0,0 0 0,0,0 0 0 0 0 7.21715391526712 0 0 7.4336858110443 0 0 0 cat,chimp,dog,horse,human,macaque,marmoset,orangutan,panda, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000250124.1 ENST00000515706.1 chr5:85676478-85677244 1 766 0 intergenic -5.32 0 0,0,0 0 0,0,0 0 0 0 0 0 2.728 2.9490861618799 0 2.761 0 0 cat,chimp,dog,elephant,horse,human,macaque,marmoset,orangutan,panda,pig, lincRNA lincRNA A549@0.269931,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0.0217685,HEPG2@0.00764,HMEC@0,HSMM@0,HUVEC@0,K562@0.281828,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0.0544095, 0 0 0 0 ENSG00000250544.1 ENST00000506471.1 chr5:86042635-86045589 2 2092 860 intergenic -3.22 1 0,0,0 0 0,0,0 0 0 33.39 1.18546845124283 0 86.936 1.23804971319312 0 82.38 0 0 cat,chimp,guinea_pig,human,macaque,marmoset,orangutan, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0.233591,H1HESC@0.0525685,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0.001173,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000250544.1 ENST00000503843.1 chr5:86042748-86045395 3 449 2194 intergenic -2.52 0 0,1,0 0 0,0,0 0 0 33.39 0 1.13035551504102 86.936 0 1.18049225159526 82.38 0 0 chimp,cow,dog,elephant,guinea_pig,horse,human,macaque,marmoset,orangutan,panda,pig, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0.233591,H1HESC@0.0525685,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0.001173,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000248701.1 ENST00000507653.1 chr5:86093502-86096097 2 480 2113 intergenic 0 0 0,0,0 0 0,0,0 0 0 0 0 0 0 5.56875 0 0 0 0 cat,chimp,dog,human,macaque,marmoset,orangutan,panda, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0.641268,H1HESC@0.103018,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000249061.1 ENST00000503349.1 chr5:86263138-86433529 3 599 169788 intergenic -1.27 0 0,1,1 0 0,0,0 56.5375626043406 7.55827855914435 0 13.6477462437396 8.95911371828398 0 14.1903171953255 10.6440973449243 0 0 0 chimp,cow,dog,elephant,horse,human,macaque,marmoset,mouse,orangutan,panda,pig,rat, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0.0238795,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0.00777, 0 0 0 0 ENSG00000249061.1 ENST00000515750.1 chr5:86415965-86433515 2 290 17258 intergenic -3.27 0 0,0,1 0 0,0,0 102.924137931034 7.16705296094565 0 28.1896551724138 10.6169892223896 0 29.3103448275862 13.0029551512342 0 0 0 cow,dog,elephant,guinea_pig,horse,human,macaque,marmoset,mouse,orangutan,panda,pig,rabbit, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0.0238795,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0.00777, 0 0 0 0 ENSG00000249362.1 ENST00000504287.1 chr5:86957859-86974964 2 650 16453 intergenic 0 0 0,0,0 0 0,0,0 72.6384615384615 48.0822950221844 192.147 83.5615384615385 63.7395003950647 234.834 85.3092307692308 65.1207682489516 256.43 0 0 cat,chimp,cow,dog,elephant,guinea_pig,horse,human,macaque,marmoset,mouse,opossum,orangutan,panda,pig,platypus,rabbit,rat, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000248708.1 ENST00000511417.1 chr5:87008952-87029086 3 589 19541 intergenic -7.86 0 0,1,0 0 0,0,0 331.874363327674 6.06176756563124 533.52 373.037351443124 6.71112020879177 556.628 374.342954159593 11.0109513330945 552.901 0 0 cat,chimp,cow,dog,elephant,guinea_pig,horse,human,macaque,marmoset,opossum,orangutan,panda,pig,platypus,rat, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0.0402165,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0.003396,NHEK@0.00446033,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000247828.2 ENST00000513011.1 chr5:87564712-87566950 2 739 1497 intergenic -1.38 0 0,1,0 1 0,0,0 117.391069012179 5.68470273881096 0 107.001353179973 4.13827655310621 30.21 132.995940460081 4.31128924515698 30.589 0 0 cat,chimp,cow,dog,guinea_pig,horse,human,macaque,marmoset,mouse,orangutan,panda,rabbit,rat, lincRNA processed_transcript A549@3.90543,AG04450@3.63244,BJ@2.22781,GM12878@12.9577,H1HESC@3.00694,HELAS3@7.58957,HEPG2@4.69969,HMEC@1.59664,HSMM@0.763737,HUVEC@1.64115,K562@16.9376,MCF7@2.70059,NHEK@2.36881,NHLF@1.09588,SKNSHRA@4.56053, 0 0 0 0 ENSG00000247828.2 ENST00000504922.1 chr5:87564733-87732502 3 582 167183 intergenic 3.48 1 1,1,1 1 0,0,0 113.965635738832 41.6279944731223 0 282.221649484536 48.9873970439578 37.49 291.398625429553 54.5797000891239 37.725 0 0 cat,chimp,cow,dog,elephant,guinea_pig,horse,human,macaque,marmoset,mouse,opossum,orangutan,panda,pig,rabbit,rat, lincRNA processed_transcript A549@3.90543,AG04450@3.63244,BJ@2.22781,GM12878@12.9577,H1HESC@3.00694,HELAS3@7.58957,HEPG2@4.69969,HMEC@1.59664,HSMM@0.763737,HUVEC@1.64115,K562@16.9376,MCF7@2.70059,NHEK@2.36881,NHLF@1.09588,SKNSHRA@4.56053, 0 0 0 0 ENSG00000247828.2 ENST00000501869.2 chr5:87564755-87732501 4 680 167060 intergenic 3.48 1 1,1,1 1 0,0,0 96.9367647058824 41.6586436011014 0 225.841176470588 49.0234646234886 47.5 233.986764705882 54.6198850712319 47.537 0 0 cat,chimp,cow,dog,elephant,guinea_pig,horse,human,macaque,marmoset,mouse,opossum,orangutan,panda,pig,rabbit,rat, lincRNA processed_transcript A549@3.90543,AG04450@3.63244,BJ@2.22781,GM12878@12.9577,H1HESC@3.00694,HELAS3@7.58957,HEPG2@4.69969,HMEC@1.59664,HSMM@0.763737,HUVEC@1.64115,K562@16.9376,MCF7@2.70059,NHEK@2.36881,NHLF@1.09588,SKNSHRA@4.56053, 0 0 0 0 ENSG00000247828.2 ENST00000504769.1 chr5:87564841-87581884 4 544 16493 intergenic 0 0 0,1,0 1 0,0,0 164.935661764706 7.70672406475475 5.5 190.560661764706 6.51148972291275 69.586 187.257352941176 7.70757290971927 77.311 1 1 chimp,human,macaque,marmoset,orangutan, lincRNA processed_transcript A549@3.90543,AG04450@3.63244,BJ@2.22781,GM12878@12.9577,H1HESC@3.00694,HELAS3@7.58957,HEPG2@4.69969,HMEC@1.59664,HSMM@0.763737,HUVEC@1.64115,K562@16.9376,MCF7@2.70059,NHEK@2.36881,NHLF@1.09588,SKNSHRA@4.56053, 0 0 0 0 ENSG00000247828.2 ENST00000501715.2 chr5:87564841-87732491 8 1093 166543 intergenic 3.48 1 1,1,1 1 0,0,0 59.5471180237877 41.7352575611104 5.5 118.369624885636 49.1526632761508 69.586 116.371454711802 54.7666008178068 77.311 0 0 chimp,cow,dog,elephant,guinea_pig,human,macaque,marmoset,opossum,orangutan,rabbit,rat, lincRNA processed_transcript A549@3.90543,AG04450@3.63244,BJ@2.22781,GM12878@12.9577,H1HESC@3.00694,HELAS3@7.58957,HEPG2@4.69969,HMEC@1.59664,HSMM@0.763737,HUVEC@1.64115,K562@16.9376,MCF7@2.70059,NHEK@2.36881,NHLF@1.09588,SKNSHRA@4.56053, 0 0 0 0 ENSG00000247828.2 ENST00000496733.2 chr5:87564856-87572039 3 406 6773 intergenic -8.19 1 0,1,0 1 0,0,0 0 13.2529159899601 5.5 0.785714285714286 7.94935774398346 74.052 0.780788177339901 10.7529898124908 81.749 1 1 chimp,human,macaque,marmoset,orangutan, lincRNA processed_transcript A549@3.90543,AG04450@3.63244,BJ@2.22781,GM12878@12.9577,H1HESC@3.00694,HELAS3@7.58957,HEPG2@4.69969,HMEC@1.59664,HSMM@0.763737,HUVEC@1.64115,K562@16.9376,MCF7@2.70059,NHEK@2.36881,NHLF@1.09588,SKNSHRA@4.56053, 0 0 0 0 ENSG00000247828.2 ENST00000510087.1 chr5:87564859-87732419 4 586 166968 intergenic 3.48 1 1,1,1 1 0,0,0 45.5887372013652 41.6815976714101 5.5 129.627986348123 49.0275501892578 74.69 125.955631399317 54.627198025969 82.383 0 0 chimp,cow,dog,elephant,guinea_pig,horse,human,macaque,marmoset,mouse,opossum,orangutan,panda,pig,rabbit,rat, lincRNA processed_transcript A549@3.90543,AG04450@3.63244,BJ@2.22781,GM12878@12.9577,H1HESC@3.00694,HELAS3@7.58957,HEPG2@4.69969,HMEC@1.59664,HSMM@0.763737,HUVEC@1.64115,K562@16.9376,MCF7@2.70059,NHEK@2.36881,NHLF@1.09588,SKNSHRA@4.56053, 0 0 0 0 ENSG00000247828.2 ENST00000504636.1 chr5:87564861-87566247 2 1037 347 intergenic -0.96 0 0,1,1 1 0,0,0 8.20636451301832 0 5.5 2.28254580520733 0 74.69 2.55544840887175 0 82.383 0 1 chimp,human,orangutan, lincRNA processed_transcript A549@3.90543,AG04450@3.63244,BJ@2.22781,GM12878@12.9577,H1HESC@3.00694,HELAS3@7.58957,HEPG2@4.69969,HMEC@1.59664,HSMM@0.763737,HUVEC@1.64115,K562@16.9376,MCF7@2.70059,NHEK@2.36881,NHLF@1.09588,SKNSHRA@4.56053, 0 0 0 0 ENSG00000247828.2 ENST00000506584.1 chr5:87564864-87583473 7 710 17887 intergenic 1.49 0 1,1,1 1 0,0,0 87.5042253521127 9.11259573992285 5.5 90.169014084507 8.04494884553027 74.69 88 9.4107452339688 82.383 1 1 chimp,human,macaque,marmoset,orangutan, lincRNA processed_transcript A549@3.90543,AG04450@3.63244,BJ@2.22781,GM12878@12.9577,H1HESC@3.00694,HELAS3@7.58957,HEPG2@4.69969,HMEC@1.59664,HSMM@0.763737,HUVEC@1.64115,K562@16.9376,MCF7@2.70059,NHEK@2.36881,NHLF@1.09588,SKNSHRA@4.56053, 0 0 0 0 ENSG00000247828.2 ENST00000512724.1 chr5:87564867-87588572 5 565 23132 intergenic 1.49 0 0,1,0 1 0,0,0 15.5362831858407 9.80572367283417 5.5 0 10.1958758429881 74.69 0 11.7062078505966 82.383 0 0 cat,chimp,horse,human,macaque,marmoset,orangutan,panda, lincRNA processed_transcript A549@3.90543,AG04450@3.63244,BJ@2.22781,GM12878@12.9577,H1HESC@3.00694,HELAS3@7.58957,HEPG2@4.69969,HMEC@1.59664,HSMM@0.763737,HUVEC@1.64115,K562@16.9376,MCF7@2.70059,NHEK@2.36881,NHLF@1.09588,SKNSHRA@4.56053, 0 0 0 0 ENSG00000247828.2 ENST00000507736.1 chr5:87566323-87583474 5 625 16518 intergenic 1.49 0 0,0,1 0 0,0,0 99.4048 9.35264559874077 3.45 102.432 8.56841021915486 0.526 99.968 10.0302700084756 0.53 0 1 chimp,human,macaque,orangutan, lincRNA processed_transcript A549@3.90543,AG04450@3.63244,BJ@2.22781,GM12878@12.9577,H1HESC@3.00694,HELAS3@7.58957,HEPG2@4.69969,HMEC@1.59664,HSMM@0.763737,HUVEC@1.64115,K562@16.9376,MCF7@2.70059,NHEK@2.36881,NHLF@1.09588,SKNSHRA@4.56053, 0 0 0 0 ENSG00000247828.2 ENST00000508015.1 chr5:87688012-87713308 3 572 24720 intergenic -5.14 0 0,0,0 0 0,0,0 184.263986013986 139.213875404531 372.494 208.935314685315 159.551577669903 497.827 208.678321678322 150.285234627832 479.283 0 0 cat,chimp,cow,dog,elephant,guinea_pig,horse,human,macaque,marmoset,mouse,opossum,orangutan,panda,pig,rabbit, lincRNA processed_transcript A549@3.90543,AG04450@3.63244,BJ@2.22781,GM12878@12.9577,H1HESC@3.00694,HELAS3@7.58957,HEPG2@4.69969,HMEC@1.59664,HSMM@0.763737,HUVEC@1.64115,K562@16.9376,MCF7@2.70059,NHEK@2.36881,NHLF@1.09588,SKNSHRA@4.56053, 0 0 0 0 ENSG00000250156.1 ENST00000506041.1 chr5:87705664-87734907 6 755 28478 intergenic -1.26 0 0,0,0 0 0,0,0 0 17.3250930542875 210.015 3.16556291390728 26.8836996980125 253.344 0 30.9173748156472 220.574 0 0 cat,chimp,cow,elephant,guinea_pig,horse,human,macaque,marmoset,orangutan,panda,pig, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000247828.2 ENST00000513694.1 chr5:87722512-87732183 2 199 9470 intergenic -4.36 0 0,0,0 0 0,0,0 0 2.20929250263992 0 4.07035175879397 6.17539598732841 0 0 9.39165786694826 2.43 0 0 cat,chimp,elephant,horse,human,macaque,marmoset,orangutan,rabbit, lincRNA processed_transcript A549@3.90543,AG04450@3.63244,BJ@2.22781,GM12878@12.9577,H1HESC@3.00694,HELAS3@7.58957,HEPG2@4.69969,HMEC@1.59664,HSMM@0.763737,HUVEC@1.64115,K562@16.9376,MCF7@2.70059,NHEK@2.36881,NHLF@1.09588,SKNSHRA@4.56053, 0 0 0 0 ENSG00000250156.1 ENST00000504034.1 chr5:87729702-87794514 2 417 64393 intergenic -9.08 0 0,0,0 0 0,0,0 0 48.2421225909649 0 0 54.6608792881214 0 0 53.6820151258677 0 0 0 cat,chimp,cow,dog,elephant,guinea_pig,horse,human,macaque,marmoset,orangutan,panda,pig,rat, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000245526.2 ENST00000506978.1 chr5:87803363-87980625 7 557 176693 intergenic 2.99 0 0,1,0 0 0,0,0 160.931777378815 84.9340720911411 134.406 136.915619389587 95.8112375702489 131.873 133.506283662478 98.8856604392929 133.04 0 0 cat,chimp,cow,dog,elephant,guinea_pig,horse,human,macaque,marmoset,mouse,orangutan,panda,pig,rabbit, lincRNA processed_transcript A549@0,AG04450@0,BJ@0,GM12878@0.005948,H1HESC@0.031069,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0.001476,MCF7@0.864119,NHEK@0,NHLF@0,SKNSHRA@0.0072985, 0 0 0 0 ENSG00000245526.2 ENST00000506664.1 chr5:87836329-87907594 3 759 70502 intergenic -5.43 0 0,0,1 0 0,0,0 426.160737812912 80.6748319196619 85.528 298.449275362319 93.1272304331793 91.11 243.64558629776 99.8096507900485 96.469 0 0 chimp,cow,dog,elephant,guinea_pig,horse,human,macaque,marmoset,mouse,opossum,orangutan,panda,pig,platypus,rabbit,rat, lincRNA processed_transcript A549@0,AG04450@0,BJ@0,GM12878@0.005948,H1HESC@0.031069,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0.001476,MCF7@0.864119,NHEK@0,NHLF@0,SKNSHRA@0.0072985, 0 0 0 0 ENSG00000245526.2 ENST00000506014.1 chr5:87836545-87974262 4 577 137134 intergenic -0.65 0 0,1,0 0 0,0,0 367.315424610052 93.4016144792684 177.774 214.514731369151 104.74091035046 209.569 196.19410745234 109.031006169148 191.728 0 0 cat,chimp,cow,dog,elephant,guinea_pig,horse,human,macaque,marmoset,mouse,opossum,orangutan,panda,pig,rabbit,rat, lincRNA processed_transcript A549@0,AG04450@0,BJ@0,GM12878@0.005948,H1HESC@0.031069,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0.001476,MCF7@0.864119,NHEK@0,NHLF@0,SKNSHRA@0.0072985, 0 0 0 0 ENSG00000245526.2 ENST00000502301.1 chr5:87836546-87974262 5 557 137151 intergenic -3.88 0 0,1,0 0 0,0,0 400.143626570916 93.3021341441185 177.774 231.644524236984 104.682320945527 209.569 205.78276481149 108.999737515585 191.728 0 0 cat,chimp,cow,dog,elephant,guinea_pig,horse,human,macaque,marmoset,mouse,opossum,orangutan,panda,pig,rabbit,rat, lincRNA processed_transcript A549@0,AG04450@0,BJ@0,GM12878@0.005948,H1HESC@0.031069,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0.001476,MCF7@0.864119,NHEK@0,NHLF@0,SKNSHRA@0.0072985, 0 0 0 0 ENSG00000245526.2 ENST00000508885.1 chr5:87836649-87955653 3 555 118445 intergenic -5.43 0 0,0,0 0 0,0,0 116.497297297297 63.5243699607413 151.434 54.1243243243243 74.387960656845 164.882 47.2540540540541 80.3233315040736 165.536 0 0 cat,chimp,cow,dog,elephant,guinea_pig,horse,human,macaque,marmoset,mouse,opossum,orangutan,panda,pig,rabbit,rat, lincRNA processed_transcript A549@0,AG04450@0,BJ@0,GM12878@0.005948,H1HESC@0.031069,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0.001476,MCF7@0.864119,NHEK@0,NHLF@0,SKNSHRA@0.0072985, 0 0 0 0 ENSG00000245526.2 ENST00000509405.1 chr5:87836665-87980622 4 507 143444 intergenic -0.65 0 0,1,0 0 0,0,0 220.136094674556 92.8798834388333 135.774 148.143984220907 104.622570480466 133.025 137.483234714004 108.396558935891 134.519 0 0 cat,chimp,cow,dog,elephant,guinea_pig,horse,human,macaque,marmoset,mouse,opossum,orangutan,panda,pig,rabbit,rat, lincRNA processed_transcript A549@0,AG04450@0,BJ@0,GM12878@0.005948,H1HESC@0.031069,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0.001476,MCF7@0.864119,NHEK@0,NHLF@0,SKNSHRA@0.0072985, 0 0 0 0 ENSG00000245526.2 ENST00000513805.1 chr5:87836702-87980642 5 553 143379 intergenic -0.65 0 0,0,0 0 0,0,0 202.878842676311 92.7760132236938 126.654 306.392405063291 104.542011033694 125.704 297.887884267631 108.331478110462 124.659 0 0 cat,chimp,cow,dog,elephant,guinea_pig,horse,human,macaque,marmoset,mouse,opossum,orangutan,panda,pig,rabbit,rat, lincRNA processed_transcript A549@0,AG04450@0,BJ@0,GM12878@0.005948,H1HESC@0.031069,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0.001476,MCF7@0.864119,NHEK@0,NHLF@0,SKNSHRA@0.0072985, 0 0 0 0 ENSG00000245526.2 ENST00000505030.1 chr5:87960263-87969143 3 3555 5321 intergenic 0.26 0 0,1,0 0 0,0,0 469.687201125176 244.744784814884 287.237 456.396343178622 215.64386393535 370.034 463.998312236287 199.34542379252 375.086 0 0 chimp,cow,dog,horse,human,macaque,marmoset,mouse,orangutan,panda, lincRNA processed_transcript A549@0,AG04450@0,BJ@0,GM12878@0.005948,H1HESC@0.031069,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0.001476,MCF7@0.864119,NHEK@0,NHLF@0,SKNSHRA@0.0072985, 0 0 0 0 ENSG00000245526.2 ENST00000500197.2 chr5:87960263-87969157 4 3377 5511 intergenic 0.70 0 0,1,0 0 0,0,0 469.976014213799 252.720921792778 278.459 461.847793899911 221.262747232807 359.744 476.176488007107 201.833061150426 364.278 0 0 chimp,cow,dog,horse,human,macaque,marmoset,mouse,orangutan,panda, lincRNA processed_transcript A549@0,AG04450@0,BJ@0,GM12878@0.005948,H1HESC@0.031069,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0.001476,MCF7@0.864119,NHEK@0,NHLF@0,SKNSHRA@0.0072985, 0 0 0 0 ENSG00000245526.2 ENST00000504246.1 chr5:87962138-87972116 4 2296 7676 intergenic 14.12 0 0,0,1 0 0,0,0 403.450348432056 231.209874934862 321.32 409.205139372822 222.1294945284 313.105 401.170731707317 209.429781136008 308.516 0 0 cow,dog,horse,human,macaque,marmoset,mouse,orangutan,panda,pig,rat, lincRNA processed_transcript A549@0,AG04450@0,BJ@0,GM12878@0.005948,H1HESC@0.031069,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0.001476,MCF7@0.864119,NHEK@0,NHLF@0,SKNSHRA@0.0072985, 0 0 0 0 ENSG00000245526.2 ENST00000511014.1 chr5:87962139-87980753 4 1660 16948 intergenic 0.26 0 0,1,1 0 0,0,0 476.01265060241 181.26244984659 86.912 375.674096385542 204.889190464952 111.909 382.134939759036 191.996164739202 109.869 0 0 cat,chimp,cow,dog,elephant,horse,human,macaque,marmoset,mouse,orangutan,panda,pig,platypus,rat, lincRNA processed_transcript A549@0,AG04450@0,BJ@0,GM12878@0.005948,H1HESC@0.031069,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0.001476,MCF7@0.864119,NHEK@0,NHLF@0,SKNSHRA@0.0072985, 0 0 0 0 ENSG00000245526.2 ENST00000509783.1 chr5:87962697-87980587 3 873 17013 intergenic 0.26 0 0,1,0 0 0,0,0 677.481099656357 181.800152824311 151.734 499.536082474227 205.185034973256 146.465 509.941580756014 192.225239522718 146.844 0 0 cat,chimp,cow,dog,elephant,horse,human,macaque,marmoset,mouse,opossum,orangutan,panda,pig,platypus,rabbit,rat, lincRNA processed_transcript A549@0,AG04450@0,BJ@0,GM12878@0.005948,H1HESC@0.031069,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0.001476,MCF7@0.864119,NHEK@0,NHLF@0,SKNSHRA@0.0072985, 0 0 0 0 ENSG00000245526.2 ENST00000515885.1 chr5:87962772-87968514 3 716 5022 intergenic 0.26 0 0,1,0 0 0,0,0 699.892458100559 245.472520908005 444.359 516.064245810056 217.566109119873 457.936 527.881284916201 202.809239346874 422.106 0 0 cat,chimp,cow,dog,elephant,horse,human,macaque,marmoset,mouse,opossum,orangutan,panda,pig,platypus,rabbit,rat, lincRNA processed_transcript A549@0,AG04450@0,BJ@0,GM12878@0.005948,H1HESC@0.031069,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0.001476,MCF7@0.864119,NHEK@0,NHLF@0,SKNSHRA@0.0072985, 0 0 0 0 ENSG00000245526.2 ENST00000513026.1 chr5:87963092-87974265 4 529 10638 intergenic 0.26 0 0,1,0 0 0,0,0 627.654064272212 240.412765557436 176.073 600.45179584121 265.888512878361 207.475 613.578449905482 249.76245534875 189.826 0 0 cat,chimp,cow,dog,elephant,horse,human,macaque,marmoset,mouse,opossum,orangutan,panda,pig,rabbit,rat, lincRNA processed_transcript A549@0,AG04450@0,BJ@0,GM12878@0.005948,H1HESC@0.031069,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0.001476,MCF7@0.864119,NHEK@0,NHLF@0,SKNSHRA@0.0072985, 0 0 0 0 ENSG00000245526.2 ENST00000513893.1 chr5:87963160-87986858 4 551 23141 intergenic 0.98 0 0,0,1 0 0,0,0 556.241379310345 146.313426386068 61.504 568.597096188748 164.524955706322 45.094 565.172413793103 154.478371721187 45.368 0 0 cat,chimp,cow,dog,elephant,guinea_pig,horse,human,macaque,marmoset,mouse,orangutan,panda,pig,rabbit,rat, lincRNA processed_transcript A549@0,AG04450@0,BJ@0,GM12878@0.005948,H1HESC@0.031069,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0.001476,MCF7@0.864119,NHEK@0,NHLF@0,SKNSHRA@0.0072985, 0 0 0 0 ENSG00000245526.2 ENST00000509265.1 chr5:87963171-87980640 4 577 16886 intergenic 6.26 0 0,1,1 0 0,0,0 504.15424610052 180.745706502428 127.566 466.745233968804 204.003908563307 126.594 458.393414211438 191.702653085396 125.645 0 0 cat,chimp,cow,dog,elephant,guinea_pig,horse,human,macaque,marmoset,mouse,orangutan,panda,pig,rabbit,rat, lincRNA processed_transcript A549@0,AG04450@0,BJ@0,GM12878@0.005948,H1HESC@0.031069,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0.001476,MCF7@0.864119,NHEK@0,NHLF@0,SKNSHRA@0.0072985, 0 0 0 0 ENSG00000245864.2 ENST00000510274.1 chr5:87972036-88018648 4 459 46147 exonic -0.75 0 0,1,0 0 0,0,0 447.352941176471 107.386373978807 175.152 461.176470588235 101.721390339567 294.429 468.43137254902 100.753678462305 291.463 0 0 cat,chimp,elephant,guinea_pig,horse,human,macaque,marmoset,mouse,orangutan,pig, antisense antisense A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000250555.1 ENST00000511000.1 chr5:87987574-87988676 3 505 593 intergenic 0 0 0,0,0 0 0,0,0 0 0 151.28 0 0 147.242 0 0 150.353 0 0 cat,chimp,elephant,horse,human,macaque,marmoset,orangutan,panda,pig, antisense antisense A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000250377.1 ENST00000508719.1 chr5:87988462-87989789 2 674 651 intergenic -2.87 0 0,1,0 0 0,0,0 0 0 0 0 4.40552995391705 0 0 4.62672811059908 0 0 0 chimp,horse,human,macaque,marmoset,orangutan,panda, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000248309.1 ENST00000511100.1 chr5:88179145-88328110 4 824 148135 exonic 2.65 0 0,1,0 1 0,0,0 123.291262135922 68.433320957235 564.16 226.876213592233 76.9750092820738 385.739 247.594660194175 74.3030141425052 314.58 0 0 cat,chimp,cow,dog,elephant,guinea_pig,horse,human,macaque,marmoset,mouse,opossum,orangutan,panda,pig,platypus,rabbit,rat, lincRNA processed_transcript A549@0,AG04450@0.084857,BJ@0.029685,GM12878@2.12588,H1HESC@0.188327,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0.182091,HUVEC@0.290692,K562@2.00948,MCF7@0,NHEK@0.00327967,NHLF@0.024067,SKNSHRA@0.157913, 0 0 0 0 ENSG00000248309.1 ENST00000514794.1 chr5:88179216-88239031 4 567 59242 exonic 1.86 0 0,1,0 1 0,0,0 625.229276895944 84.3691975287803 594.903 722.700176366843 97.9290368319773 411.659 728.342151675485 93.397167550049 342.482 0 0 chimp,cow,dog,elephant,guinea_pig,horse,human,macaque,marmoset,mouse,opossum,orangutan,panda,pig,platypus,rabbit,rat, lincRNA processed_transcript A549@0,AG04450@0.084857,BJ@0.029685,GM12878@2.12588,H1HESC@0.188327,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0.182091,HUVEC@0.290692,K562@2.00948,MCF7@0,NHEK@0.00327967,NHLF@0.024067,SKNSHRA@0.157913, 0 0 0 0 ENSG00000248309.1 ENST00000512585.1 chr5:88179234-88600988 6 735 421009 exonic 5.92 0 0,1,0 1 0,0,0 85.7891156462585 54.135367652473 593.233 113.125170068027 63.3168293314395 421.865 118.983673469388 62.2621701673835 352.703 0 0 cat,chimp,cow,dog,elephant,guinea_pig,horse,human,macaque,marmoset,mouse,opossum,orangutan,panda,pig,platypus,rabbit, lincRNA processed_transcript A549@0,AG04450@0.084857,BJ@0.029685,GM12878@2.12588,H1HESC@0.188327,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0.182091,HUVEC@0.290692,K562@2.00948,MCF7@0,NHEK@0.00327967,NHLF@0.024067,SKNSHRA@0.157913, 0 0 0 0 ENSG00000248309.1 ENST00000513704.1 chr5:88185125-88239160 3 560 53471 intronic -2.88 0 0,1,0 1 0,0,0 513.160714285714 76.8589702829571 22.862 536.925 95.7727366235903 69.431 535.978571428572 90.3725009818406 54.426 0 0 chimp,cow,dog,elephant,human,marmoset,mouse,orangutan,panda,pig,rabbit, lincRNA processed_transcript A549@0,AG04450@0.084857,BJ@0.029685,GM12878@2.12588,H1HESC@0.188327,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0.182091,HUVEC@0.290692,K562@2.00948,MCF7@0,NHEK@0.00327967,NHLF@0.024067,SKNSHRA@0.157913, 0 0 0 0 ENSG00000248309.1 ENST00000514011.1 chr5:88185152-88263096 4 1750 76188 intronic 0.93 1 0,1,0 1 0,0,0 77.4531428571429 82.7992991022208 22.862 78.5891428571429 97.8586391557726 71.911 77.1325714285714 92.6678085787787 56.936 0 0 dog,elephant,horse,human,macaque,marmoset,orangutan,panda,pig,rabbit,rat, lincRNA processed_transcript A549@0,AG04450@0.084857,BJ@0.029685,GM12878@2.12588,H1HESC@0.188327,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0.182091,HUVEC@0.290692,K562@2.00948,MCF7@0,NHEK@0.00327967,NHLF@0.024067,SKNSHRA@0.157913, 0 0 0 0 ENSG00000248309.1 ENST00000509179.1 chr5:88185191-88261689 5 383 76107 intronic -6.34 0 0,1,0 1 0,0,0 353.89817232376 82.8874216563523 22.862 359.088772845953 97.9627892309512 71.911 352.433420365535 92.7664340993601 56.936 0 0 cat,chimp,cow,dog,elephant,guinea_pig,human,macaque,marmoset,mouse,opossum,orangutan,panda,pig,rabbit, lincRNA processed_transcript A549@0,AG04450@0.084857,BJ@0.029685,GM12878@2.12588,H1HESC@0.188327,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0.182091,HUVEC@0.290692,K562@2.00948,MCF7@0,NHEK@0.00327967,NHLF@0.024067,SKNSHRA@0.157913, 0 0 0 0 ENSG00000248309.1 ENST00000514092.1 chr5:88185262-88761799 7 494 576031 intronic 3.43 0 0,1,0 1 0,0,0 121.53036437247 50.3736778055348 39.192 122.98987854251 58.2297463157364 78.137 133.82995951417 57.9009029027951 57.219 0 0 cat,chimp,cow,dog,elephant,guinea_pig,horse,human,macaque,marmoset,mouse,opossum,orangutan,panda,pig,platypus,rabbit, lincRNA processed_transcript A549@0,AG04450@0.084857,BJ@0.029685,GM12878@2.12588,H1HESC@0.188327,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0.182091,HUVEC@0.290692,K562@2.00948,MCF7@0,NHEK@0.00327967,NHLF@0.024067,SKNSHRA@0.157913, 0 0 0 0 ENSG00000248309.1 ENST00000511876.1 chr5:88185268-88201087 3 355 15460 exonic -6.90 0 0,1,0 1 0,0,0 620.087323943662 57.9781371280724 41.322 719.005633802817 77.201617076326 78.407 683.211267605634 66.6674644243208 57.514 0 0 cat,chimp,cow,dog,elephant,guinea_pig,horse,human,macaque,marmoset,mouse,opossum,orangutan,panda,pig,platypus,rabbit,rat, lincRNA processed_transcript A549@0,AG04450@0.084857,BJ@0.029685,GM12878@2.12588,H1HESC@0.188327,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0.182091,HUVEC@0.290692,K562@2.00948,MCF7@0,NHEK@0.00327967,NHLF@0.024067,SKNSHRA@0.157913, 0 0 0 0 ENSG00000248309.1 ENST00000508718.1 chr5:88185271-88239115 4 479 53359 intronic 6.40 0 0,1,0 1 0,0,0 493.893528183716 77.0202964823179 42.387 538.427974947808 95.9737626267359 79.217 546.530271398747 90.5621919451264 58.399 0 0 chimp,cow,dog,elephant,guinea_pig,horse,human,macaque,marmoset,mouse,orangutan,panda,pig,platypus,rabbit,rat, lincRNA processed_transcript A549@0,AG04450@0.084857,BJ@0.029685,GM12878@2.12588,H1HESC@0.188327,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0.182091,HUVEC@0.290692,K562@2.00948,MCF7@0,NHEK@0.00327967,NHLF@0.024067,SKNSHRA@0.157913, 0 0 0 0 ENSG00000248309.1 ENST00000514158.1 chr5:88185277-88237187 4 709 51195 intronic -3.78 1 1,1,1 1 0,0,0 57.4203102961918 72.2220724680145 44.517 72.901269393512 90.5898818243969 80.837 75.6671368124118 85.5023146791679 60.169 0 0 cat,chimp,cow,dog,elephant,guinea_pig,horse,human,macaque,marmoset,mouse,opossum,orangutan,panda,pig,rabbit, lincRNA processed_transcript A549@0,AG04450@0.084857,BJ@0.029685,GM12878@2.12588,H1HESC@0.188327,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0.182091,HUVEC@0.290692,K562@2.00948,MCF7@0,NHEK@0.00327967,NHLF@0.024067,SKNSHRA@0.157913, 0 0 0 0 ENSG00000248309.1 ENST00000506665.1 chr5:88188074-88261713 4 358 73275 exonic 0 0 0,0,0 0 0,0,0 506.259776536313 84.6669805527124 0 600.801675977654 100.197775503241 0 596.960893854749 94.8862231320368 0 0 0 cat,chimp,cow,dog,elephant,guinea_pig,horse,human,macaque,marmoset,mouse,opossum,orangutan,panda,pig,platypus,rabbit,rat, lincRNA processed_transcript A549@0,AG04450@0.084857,BJ@0.029685,GM12878@2.12588,H1HESC@0.188327,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0.182091,HUVEC@0.290692,K562@2.00948,MCF7@0,NHEK@0.00327967,NHLF@0.024067,SKNSHRA@0.157913, 0 0 0 0 ENSG00000248309.1 ENST00000508521.1 chr5:88238904-88371148 4 423 131815 intergenic -1.26 0 0,1,1 0 0,0,0 56.8439716312057 51.3116640746501 461.094 58.434988179669 60.1705723931268 536.021 59.1583924349882 59.7477752911277 507.603 0 0 chimp,dog,elephant,guinea_pig,horse,human,macaque,marmoset,orangutan,panda, lincRNA processed_transcript A549@0,AG04450@0.084857,BJ@0.029685,GM12878@2.12588,H1HESC@0.188327,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0.182091,HUVEC@0.290692,K562@2.00948,MCF7@0,NHEK@0.00327967,NHLF@0.024067,SKNSHRA@0.157913, 0 0 0 0 ENSG00000248309.1 ENST00000514571.1 chr5:88261692-88464485 4 590 202197 intergenic -3.12 0 0,0,1 0 0,0,0 0 48.2506417009155 0 0 54.6656626952922 4.464 0 55.0280320677359 9.037 0 0 cat,chimp,guinea_pig,human,macaque,marmoset,orangutan, lincRNA processed_transcript A549@0,AG04450@0.084857,BJ@0.029685,GM12878@2.12588,H1HESC@0.188327,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0.182091,HUVEC@0.290692,K562@2.00948,MCF7@0,NHEK@0.00327967,NHLF@0.024067,SKNSHRA@0.157913, 0 0 0 0 ENSG00000248309.1 ENST00000508742.1 chr5:88714624-88762215 3 676 46911 intergenic -3.09 0 0,0,1 0 0,0,0 0 57.2638613544798 0 0 62.3271727313424 0 0 63.8256912024898 0 0 0 cat,dog,elephant,horse,human,macaque,marmoset,orangutan,panda,pig,rabbit, lincRNA processed_transcript A549@0,AG04450@0.084857,BJ@0.029685,GM12878@2.12588,H1HESC@0.188327,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0.182091,HUVEC@0.290692,K562@2.00948,MCF7@0,NHEK@0.00327967,NHLF@0.024067,SKNSHRA@0.157913, 0 0 0 0 ENSG00000250831.1 ENST00000514662.1 chr5:88762354-88765856 2 251 3249 intergenic -8.52 0 0,0,0 0 0,0,0 0 0 0 61.9043824701195 2.3601108033241 1.24 63.191235059761 2.37980917205294 1.295 0 1 human,macaque,marmoset,orangutan, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0.009265,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 56 3 0 0 ENSG00000250437.1 ENST00000503691.1 chr5:88877026-88973518 2 418 96072 intergenic 6.01 0 0,0,0 0 0,0,0 0 17.4616849862603 0 0 20.1755246065451 0 0 21.7731805312682 0 1 1 chimp,human,macaque,marmoset,orangutan, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0.0047995,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000214942.4 ENST00000505109.1 chr5:89196481-89200725 2 582 3660 intergenic -0.00 0 0,0,0 0 0,0,0 0 176.144262295082 0 0 189.736065573771 0 0 187.840710382514 0 0 0 chimp,guinea_pig,human,macaque,marmoset,orangutan, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 1 96 0 0 ENSG00000249265.1 ENST00000512941.1 chr5:89240727-89243390 2 568 2093 intergenic -7.60 0 0,0,0 0 0,0,0 256.056338028169 258.665074056378 0 242.112676056338 193.631151457238 0 240.431338028169 168.749163879599 0 0 0 cat,chimp,cow,dog,elephant,guinea_pig,horse,human,marmoset,orangutan,panda,pig,rabbit, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000248555.2 ENST00000505712.1 chr5:89454156-89585755 6 434 131155 intergenic -3.02 0 0,1,0 0 0,0,0 0.481566820276498 33.9637528115588 475.278 0 40.400022873699 472.443 0 41.1363653692197 429.547 1 1 chimp,human,macaque,marmoset,orangutan, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000248555.2 ENST00000524094.1 chr5:89454173-89456450 2 267 2008 intergenic -6.72 0 0,0,0 0 0,0,0 0 31.8271912350598 0 0 26.4651394422311 1.912 0 32.0303784860558 2.008 1 1 chimp,human,macaque,marmoset,orangutan, lincRNA retained_intron A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000248555.2 ENST00000518436.1 chr5:89455806-89585798 5 370 129614 intergenic 0 0 0,1,1 0 0,0,0 0.564864864864865 33.8744811517274 504.432 0 40.4703427098925 491.273 0 41.1292221519281 448.512 0 0 chimp,cow,elephant,horse,human,macaque,marmoset,orangutan,pig, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000248555.2 ENST00000519336.1 chr5:89530743-89585888 6 555 54580 intergenic -0.84 0 0,1,0 0 0,0,0 112.434234234234 34.5221326493221 518.67 129.196396396396 38.0125687064859 490.14 107.147747747748 38.5351044338586 448.3 0 0 chimp,cow,dog,elephant,guinea_pig,horse,human,macaque,marmoset,mouse,opossum,orangutan,panda,pig,rabbit, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000253321.1 ENST00000520032.1 chr5:89648854-89652426 2 570 3000 intergenic 1.75 0 0,0,1 0 0,0,0 91.5894736842105 50.994 417.648 108.475438596491 68.9366666666667 350.897 106.854385964912 71.4466666666667 337.553 0 0 chimp,human,macaque,marmoset,orangutan,rabbit, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0.045733,H1HESC@0,HELAS3@0.0079005,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0.0071095,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000212930.3 ENST00000514239.1 chr5:90519236-90519784 1 548 0 intergenic -5.00 0 0,0,0 0 0,0,0 35.0529197080292 0 0 61.8813868613139 0 0 70.9981751824818 0 0 0 0 chimp,human,macaque,marmoset,mouse,orangutan, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 1 96 0 0 ENSG00000251093.1 ENST00000510153.1 chr5:90522292-90522888 1 596 0 intergenic 0 0 0,0,0 0 0,0,0 0 0 0 0 0 17.328 0 0 18.254 0 0 cat,chimp,cow,dog,horse,human,macaque,marmoset,orangutan,panda, lincRNA lincRNA A549@0.0616025,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0.0076365,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0.0542645, 0 0 0 0 ENSG00000234292.3 ENST00000440769.3 chr5:90575914-90576959 1 1045 0 intergenic 18.91 0 0,0,0 0 0,1,0 9.83732057416268 0 43.52 65.9234449760766 0 6.28 59.9435406698565 0 8.208 0 0 chimp,cow,elephant,human,marmoset,orangutan, lincRNA lincRNA A549@0.121066,AG04450@0.0970375,BJ@0.070123,GM12878@0.109711,H1HESC@0.047358,HELAS3@0.243947,HEPG2@0.143469,HMEC@0,HSMM@0,HUVEC@0.342908,K562@0.061984,MCF7@0,NHEK@0.0478083,NHLF@0.221179,SKNSHRA@0.132725, 0 0 0 0 ENSG00000248323.1 ENST00000513492.1 chr5:90598846-90608312 3 430 9032 intergenic -1.66 0 0,0,0 0 0,0,0 68.9162790697674 29.7872010628875 6.27 210.881395348837 33.4974534986714 603.67 196.637209302326 34.6496899911426 620.317 0 0 cat,chimp,cow,elephant,horse,human,macaque,marmoset,mouse,orangutan,panda,platypus,rabbit, lincRNA processed_transcript A549@6.66349,AG04450@0.101404,BJ@0.112546,GM12878@0.0079325,H1HESC@0.0043655,HELAS3@3.6124,HEPG2@1.15847,HMEC@0.108372,HSMM@0.0496385,HUVEC@0.117316,K562@0.287521,MCF7@0.040895,NHEK@0.0656747,NHLF@0.015722,SKNSHRA@0.440617, 0 0 0 0 ENSG00000248323.1 ENST00000511918.1 chr5:90598846-90610200 5 823 10523 intergenic 1.92 0 0,1,0 0 0,0,0 17.0303766707169 28.1558490924641 22.268 32.0400972053463 40.0270835313124 31.603 37.0534629404617 40.4834172764421 31.145 0 0 cat,chimp,human,macaque,marmoset,orangutan, lincRNA processed_transcript A549@6.66349,AG04450@0.101404,BJ@0.112546,GM12878@0.0079325,H1HESC@0.0043655,HELAS3@3.6124,HEPG2@1.15847,HMEC@0.108372,HSMM@0.0496385,HUVEC@0.117316,K562@0.287521,MCF7@0.040895,NHEK@0.0656747,NHLF@0.015722,SKNSHRA@0.440617, 0 0 0 0 ENSG00000248323.1 ENST00000513626.1 chr5:90606838-90610219 3 2669 708 intergenic 1.41 0 0,1,1 0 0,0,0 71.9243162233046 0 16.701 91.0153615586362 25.7090395480226 31.603 93.5376545522668 23.930790960452 31.145 0 0 chimp,cow,elephant,horse,human,macaque,marmoset,mouse,orangutan,rabbit,rat, lincRNA processed_transcript A549@6.66349,AG04450@0.101404,BJ@0.112546,GM12878@0.0079325,H1HESC@0.0043655,HELAS3@3.6124,HEPG2@1.15847,HMEC@0.108372,HSMM@0.0496385,HUVEC@0.117316,K562@0.287521,MCF7@0.040895,NHEK@0.0656747,NHLF@0.015722,SKNSHRA@0.440617, 0 0 0 0 ENSG00000241059.2 ENST00000484429.2 chr5:90651197-90651843 1 646 0 intergenic -13.12 0 0,0,0 0 0,0,0 0 0 0 0 0 13.77 0 0 353.21 0 0 chimp,elephant,human,macaque,marmoset,panda, antisense antisense A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000250049.1 ENST00000507217.1 chr5:91378414-91815133 4 572 436141 intergenic 2.27 0 0,1,0 0 0,0,0 110.853146853147 20.6531763810327 209.984 98.6538461538462 22.0274062745763 265.957 125.122377622378 22.9846746808945 328.955 0 0 cat,chimp,cow,dog,elephant,guinea_pig,horse,human,macaque,marmoset,mouse,orangutan,panda,pig,rabbit,rat, lincRNA lincRNA A549@0.002202,AG04450@0,BJ@0,GM12878@0.224405,H1HESC@0.0105055,HELAS3@0.0014115,HEPG2@0.081045,HMEC@0,HSMM@0,HUVEC@0,K562@0.0008305,MCF7@0.0020705,NHEK@0,NHLF@0.0006525,SKNSHRA@0.073153, 0 0 0 0 ENSG00000250049.1 ENST00000502934.1 chr5:91495354-91742351 5 2952 244037 intergenic -0.76 0 0,1,0 0 0,0,0 6.26829268292683 14.4269106733815 0 6.9190379403794 17.0476239258801 0 7.19749322493225 17.8065498264607 0 0 0 cat,chimp,cow,dog,elephant,guinea_pig,horse,human,macaque,marmoset,mouse,opossum,orangutan,panda,pig,rabbit, lincRNA lincRNA A549@0.002202,AG04450@0,BJ@0,GM12878@0.224405,H1HESC@0.0105055,HELAS3@0.0014115,HEPG2@0.081045,HMEC@0,HSMM@0,HUVEC@0,K562@0.0008305,MCF7@0.0020705,NHEK@0,NHLF@0.0006525,SKNSHRA@0.073153, 0 0 0 0 ENSG00000248864.1 ENST00000511323.1 chr5:91625047-91628401 2 276 3076 intergenic -0.98 0 0,0,0 0 0,0,0 0 13.0084525357607 200.819 4.16666666666667 17.6115084525358 182.213 4.40217391304348 19.693433029909 197.7 1 1 chimp,human,macaque,marmoset,orangutan, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000249776.1 ENST00000512210.1 chr5:91745963-91975204 4 507 228728 intergenic 0 0 0,0,0 0 0,0,0 117.542406311637 35.8373920114722 210.144 7.31360946745562 42.0759198698891 170.844 7.78698224852071 44.676261760694 199.864 0 0 cat,chimp,cow,elephant,human,macaque,marmoset,orangutan,pig,rabbit, lincRNA lincRNA A549@0.0724985,AG04450@0.083719,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0.036702, 0 0 0 0 ENSG00000249776.1 ENST00000513779.1 chr5:91767910-91996570 3 336 228320 intergenic -4.60 0 0,0,0 0 0,0,0 0 40.4718728100911 0 0 45.0932244218641 1.84 0 48.4623116678346 6.318 1 1 chimp,human,macaque,marmoset,orangutan, lincRNA lincRNA A549@0.0724985,AG04450@0.083719,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0.036702, 0 0 0 0 ENSG00000249776.1 ENST00000512284.1 chr5:91889150-91895740 2 262 6326 intergenic 0 0 0,0,0 0 0,0,0 272.671755725191 107.6934871957 237.882 66.1526717557252 107.305090104331 307.095 72.9923664122137 114.92254189061 329.547 0 0 cat,chimp,cow,dog,elephant,guinea_pig,horse,human,macaque,marmoset,orangutan,panda,pig,rabbit, lincRNA lincRNA A549@0.0724985,AG04450@0.083719,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0.036702, 0 0 0 0 ENSG00000249169.1 ENST00000512237.1 chr5:91990555-92006441 2 950 14934 intergenic 0.42 1 0,1,1 0 0,0,0 0 35.255591268247 0 0 32.2098567028258 0 0 37.1729610285255 0 0 0 cat,chimp,cow,dog,elephant,guinea_pig,horse,human,macaque,marmoset,orangutan,panda,pig,rabbit, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000249169.1 ENST00000513812.1 chr5:92005577-92014848 2 570 8699 intergenic -4.63 0 0,0,0 0 0,0,0 0 148.527301988734 0 250.310526315789 104.184503965973 0 261.40701754386 110.739855155765 0 0 0 cat,chimp,cow,elephant,guinea_pig,horse,human,macaque,marmoset,mouse,opossum,orangutan,panda,pig,platypus,rabbit,rat, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000249984.1 ENST00000503489.1 chr5:92011663-92023961 2 728 11568 intergenic 2.57 0 0,0,1 0 0,0,0 438.152472527473 67.9857365145228 66.086 376.063186813187 64.7105809128631 101.601 434.851648351648 66.0820366528354 182.745 0 0 chimp,cow,dog,elephant,guinea_pig,horse,human,macaque,marmoset,mouse,opossum,orangutan,panda,pig,platypus,rat, lincRNA lincRNA A549@0.0075675,AG04450@0.0701565,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0.002673,SKNSHRA@0.066161, 0 0 0 0 ENSG00000248588.1 ENST00000502383.1 chr5:92161962-92179711 2 583 17164 intergenic 1.23 0 0,0,0 0 0,0,0 0 3.9431367979492 0 0 6.43515497553018 0 0 9.53612211605686 0 0 0 cat,horse,human,rabbit, lincRNA lincRNA A549@0,AG04450@0.036859,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0.0093255,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0.0066705,SKNSHRA@0, 0 0 0 0 ENSG00000248528.1 ENST00000507491.1 chr5:92242887-92275298 4 703 31702 intergenic 0.38 0 0,0,0 0 0,0,0 31.9203413940256 65.4605387672702 46.284 26.8079658605974 68.3559081445966 92.697 26.4679943100996 65.867358526276 107.993 0 0 chimp,horse,human,macaque,marmoset,orangutan, lincRNA lincRNA A549@0.121972,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0.02952,HEPG2@0.036166,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0.0054585,SKNSHRA@0.0117995, 0 0 0 0 ENSG00000251361.1 ENST00000515153.1 chr5:92355369-92404375 3 622 48380 intergenic 2.26 1 0,1,0 0 0,0,0 28.8279742765273 80.2867300537412 147.792 38.1157556270096 76.0714344770567 134.234 13.9774919614148 73.6965068210004 123.402 0 0 cat,chimp,dog,human,macaque,marmoset,orangutan,panda,pig,rabbit, lincRNA lincRNA A549@0.008839,AG04450@0,BJ@0.0232315,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0.032757,HSMM@0.138788,HUVEC@0,K562@0,MCF7@0.0065795,NHEK@0,NHLF@0,SKNSHRA@0.0188495, 0 0 0 0 ENSG00000237187.3 ENST00000510254.1 chr5:92746995-92916713 3 859 168855 intergenic 5.27 0 0,1,1 0 0,1,0 60.5681024447031 35.0823132273252 206.82 49.2630966239814 40.05376210358 239.732 112.91036088475 45.6420893666163 194.366 0 0 cat,chimp,cow,dog,guinea_pig,horse,human,macaque,marmoset,mouse,orangutan,rabbit, lincRNA retained_intron A549@0.850883,AG04450@3.09954,BJ@3.26797,GM12878@0.0457205,H1HESC@0.092704,HELAS3@1.31543,HEPG2@0.598424,HMEC@0.443676,HSMM@0.933335,HUVEC@1.31983,K562@0.0024525,MCF7@0.0661965,NHEK@0.0263473,NHLF@2.31579,SKNSHRA@2.36481, 0 0 0 0 ENSG00000237187.3 ENST00000504474.1 chr5:92877578-92917003 7 2861 36552 intergenic 0.22 0 0,1,1 1 0,0,0 14.5242922055225 69.3656708251258 181.304 38.9426773855295 79.7795743050996 206.421 40.2897588255855 86.3234843510616 175.649 0 0 chimp,horse,human,macaque,marmoset,orangutan, lincRNA processed_transcript A549@0.850883,AG04450@3.09954,BJ@3.26797,GM12878@0.0457205,H1HESC@0.092704,HELAS3@1.31543,HEPG2@0.598424,HMEC@0.443676,HSMM@0.933335,HUVEC@1.31983,K562@0.0024525,MCF7@0.0661965,NHEK@0.0263473,NHLF@2.31579,SKNSHRA@2.36481, 0 0 0 0 ENSG00000237187.3 ENST00000503134.1 chr5:92879248-92916738 6 1489 35991 intergenic 5.27 0 0,1,0 0 0,1,0 37.2612491605104 69.3732321969381 206.82 53.7716588314305 80.376677502709 239.732 91.0899932840833 85.822789030591 194.366 1 1 chimp,human,macaque,marmoset,orangutan, lincRNA processed_transcript A549@0.850883,AG04450@3.09954,BJ@3.26797,GM12878@0.0457205,H1HESC@0.092704,HELAS3@1.31543,HEPG2@0.598424,HMEC@0.443676,HSMM@0.933335,HUVEC@1.31983,K562@0.0024525,MCF7@0.0661965,NHEK@0.0263473,NHLF@2.31579,SKNSHRA@2.36481, 0 0 0 0 ENSG00000237187.3 ENST00000507963.1 chr5:92889459-92916761 4 918 26378 intergenic 5.27 0 0,1,0 0 0,1,0 56.9259259259259 84.0990598225794 206.82 51.8529411764706 98.0490181211616 239.732 111.196078431373 99.9472666616119 194.366 0 0 chimp,cow,dog,horse,human,macaque,marmoset,orangutan,panda,rabbit, lincRNA retained_intron A549@0.850883,AG04450@3.09954,BJ@3.26797,GM12878@0.0457205,H1HESC@0.092704,HELAS3@1.31543,HEPG2@0.598424,HMEC@0.443676,HSMM@0.933335,HUVEC@1.31983,K562@0.0024525,MCF7@0.0661965,NHEK@0.0263473,NHLF@2.31579,SKNSHRA@2.36481, 0 0 0 0 ENSG00000237187.3 ENST00000513055.1 chr5:92889467-92921354 4 641 31240 exonic 1.38 0 0,1,0 1 0,0,0 154.505460218409 126.448751600512 752.978 349.126365054602 144.533674775928 608.632 313.563182527301 142.235179257362 498.841 0 0 chimp,cow,dog,elephant,horse,human,macaque,marmoset,orangutan,panda,pig,rabbit, lincRNA processed_transcript A549@0.850883,AG04450@3.09954,BJ@3.26797,GM12878@0.0457205,H1HESC@0.092704,HELAS3@1.31543,HEPG2@0.598424,HMEC@0.443676,HSMM@0.933335,HUVEC@1.31983,K562@0.0024525,MCF7@0.0661965,NHEK@0.0263473,NHLF@2.31579,SKNSHRA@2.36481, 0 0 0 0 ENSG00000250089.1 ENST00000513563.1 chr5:92936063-92939304 1 3241 0 intergenic 7.08 0 0,0,0 0 0,0,0 462.353286022832 0 316.793 509.057081147794 0 183.69 478.319037334156 0 150.889 0 0 chimp,elephant,guinea_pig,human,macaque,marmoset,orangutan, lincRNA lincRNA A549@0,AG04450@0,BJ@0.003012,GM12878@0.001804,H1HESC@0,HELAS3@0.013592,HEPG2@0.0043115,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0.0012685,NHEK@0,NHLF@0,SKNSHRA@0.018572, 0 0 0 0 ENSG00000250880.1 ENST00000511874.1 chr5:93070508-93076829 1 6321 0 intronic 6.88 0 0,1,0 0 0,0,1 0 0 13.2 4.02594526182566 0 19.021 34.8644201866793 0 58.459 0 1 chimp,human,orangutan, processed_transcript processed_transcript A549@0.155231,AG04450@0.184656,BJ@0.177302,GM12878@0.632249,H1HESC@0.183887,HELAS3@0.148803,HEPG2@0.149439,HMEC@0,HSMM@0.006322,HUVEC@0.327553,K562@0.059508,MCF7@0.0420325,NHEK@0.169401,NHLF@0.0109545,SKNSHRA@0.256462, 0 0 0 0 ENSG00000251023.1 ENST00000505668.1 chr5:93196375-93199531 1 3156 0 intronic 0.58 0 0,0,0 0 0,0,0 0 0 0 2.87769328263625 0 27.012 4.14828897338403 0 62.805 1 1 chimp,human,macaque,marmoset,orangutan, sense_intronic sense_intronic A549@0.0778895,AG04450@0.0427535,BJ@0.0372545,GM12878@0.214061,H1HESC@0.0322345,HELAS3@0.054146,HEPG2@0.0578495,HMEC@0.0054,HSMM@0.005761,HUVEC@0.0984555,K562@0.0527405,MCF7@0.0164065,NHEK@0.068519,NHLF@0.008717,SKNSHRA@0.0971785, 0 0 0 0 ENSG00000249175.1 ENST00000513849.1 chr5:94124494-94129304 4 1936 2868 intronic 8.84 0 0,0,0 0 0,0,0 56.5852272727273 0 0 61.6565082644628 4.80125523012552 2.94 62.0459710743802 9.00139470013947 12.903 0 0 chimp,cow,horse,human,macaque,marmoset,orangutan, antisense antisense A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0.0168725,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0.19008,SKNSHRA@0.002339, 0 0 0 0 ENSG00000249545.1 ENST00000503710.1 chr5:94314855-94316597 2 525 1215 intronic -3.70 1 0,0,0 0 0,0,0 30.4857142857143 0 0 26.2914285714286 4.40740740740741 0 23.7504761904762 8.23703703703704 0 0 0 chimp,horse,human,macaque,marmoset,orangutan, antisense antisense A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000250240.1 ENST00000512486.1 chr5:95036953-95067999 4 805 30235 exonic 1.15 0 0,1,0 0 0,0,0 89.7701863354037 4.27583925913676 36.188 93.2546583850932 9.82728625764842 18.977 101.557763975155 9.88850669753597 16.379 0 0 chimp,elephant,human,orangutan, antisense antisense A549@0.0215415,AG04450@0.394018,BJ@0.570234,GM12878@0.184343,H1HESC@0,HELAS3@0.383941,HEPG2@0.0926185,HMEC@0,HSMM@0.535982,HUVEC@0.110334,K562@0.113045,MCF7@0.268898,NHEK@0,NHLF@0.282713,SKNSHRA@0.0758315, 0 0 0 0 ENSG00000250240.1 ENST00000513235.1 chr5:95052686-95067991 3 574 14727 exonic 1.15 0 0,1,0 0 0,0,0 125.897212543554 8.77843416853399 36.188 130.783972125436 19.9736538330957 18.977 142.428571428571 19.9088748557072 16.379 0 0 chimp,human,macaque,marmoset,orangutan,rabbit, antisense antisense A549@0.0215415,AG04450@0.394018,BJ@0.570234,GM12878@0.184343,H1HESC@0,HELAS3@0.383941,HEPG2@0.0926185,HMEC@0,HSMM@0.535982,HUVEC@0.110334,K562@0.113045,MCF7@0.268898,NHEK@0,NHLF@0.282713,SKNSHRA@0.0758315, 0 0 0 0 ENSG00000251409.1 ENST00000509999.1 chr5:95171647-95188425 2 448 16328 exonic 1.16 0 0,0,0 0 0,0,0 0 0 0 0 0.620529152376286 0 0 0.850195982361588 0 0 0 chimp,dog,human,macaque,orangutan, antisense antisense A549@0,AG04450@0,BJ@0.0218845,GM12878@0,H1HESC@0,HELAS3@0.0339785,HEPG2@0.0095695,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0.0341085,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000250362.1 ENST00000503091.1 chr5:95197490-95210223 3 662 12067 intergenic 1.27 0 0,1,0 0 0,0,0 60.5528700906344 15.1213226153974 0 55.9003021148036 26.6487942322035 3.648 66.1993957703928 27.9325432999088 6.295 0 0 chimp,dog,elephant,horse,human,macaque,marmoset,mouse,orangutan,panda,rat, antisense antisense A549@0.0142965,AG04450@0.0413305,BJ@0.0586535,GM12878@0,H1HESC@0,HELAS3@0.325988,HEPG2@0.222292,HMEC@0,HSMM@0.0118495,HUVEC@0.038004,K562@0,MCF7@0,NHEK@0,NHLF@0.0058115,SKNSHRA@0.013336, 0 0 0 0 ENSG00000250362.1 ENST00000510343.1 chr5:95197510-95198800 2 731 557 intergenic 1.27 0 0,1,0 0 0,0,0 118.949384404925 51.2154398563734 0 141.391244870041 25.8653500897666 6.761 153.021887824897 34.5780969479354 9.015 0 0 chimp,dog,elephant,horse,human,macaque,marmoset,mouse,orangutan,panda, antisense retained_intron A549@0.0142965,AG04450@0.0413305,BJ@0.0586535,GM12878@0,H1HESC@0,HELAS3@0.325988,HEPG2@0.222292,HMEC@0,HSMM@0.0118495,HUVEC@0.038004,K562@0,MCF7@0,NHEK@0,NHLF@0.0058115,SKNSHRA@0.013336, 0 0 0 0 ENSG00000251314.1 ENST00000502645.1 chr5:95297705-95970220 6 533 671972 exonic 1.08 0 0,1,0 1 0,0,0 14.3489681050657 11.6297449893746 95.975 31.9155722326454 16.4313155905306 251.704 30.234521575985 17.9431211419523 245.065 0 0 chimp,elephant,guinea_pig,horse,human,macaque,marmoset,orangutan, processed_transcript processed_transcript A549@0.070239,AG04450@0.279154,BJ@0.347685,GM12878@0.222552,H1HESC@0.001016,HELAS3@0.0847025,HEPG2@0.172051,HMEC@0.017185,HSMM@0.075201,HUVEC@0.124272,K562@0.070478,MCF7@0,NHEK@1.56089,NHLF@0.0541905,SKNSHRA@0.144815, 0 0 0 0 ENSG00000251314.1 ENST00000511775.1 chr5:95297706-95654722 2 579 356435 exonic -1.84 0 0,1,0 1 0,0,0 13.2089810017271 11.6310771950005 95.975 52.3488773747841 16.5112152285831 252.107 50.8013816925734 18.5757431228695 245.468 0 0 cat,chimp,cow,elephant,horse,human,macaque,marmoset,orangutan,rabbit, processed_transcript retained_intron A549@0.070239,AG04450@0.279154,BJ@0.347685,GM12878@0.222552,H1HESC@0.001016,HELAS3@0.0847025,HEPG2@0.172051,HMEC@0.017185,HSMM@0.075201,HUVEC@0.124272,K562@0.070478,MCF7@0,NHEK@1.56089,NHLF@0.0541905,SKNSHRA@0.144815, 0 0 0 0 ENSG00000250955.1 ENST00000506070.1 chr5:95300703-95322015 4 567 20739 intergenic -0.08 0 0,0,0 0 0,0,0 0 12.7535078836974 0 17.5573192239859 18.9820627802691 3.897 18.9594356261023 19.78533198322 26.307 0 0 cat,chimp,dog,horse,human,macaque,marmoset,orangutan,panda, processed_transcript processed_transcript A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000250551.1 ENST00000507997.1 chr5:95385819-95551223 3 701 164699 intergenic 1.43 0 0,1,0 0 0,0,0 36.2482168330956 12.4507556208599 0 84.4379457917261 17.2294792318108 9.408 84.0627674750357 19.4774831662609 10.144 0 0 chimp,cow,dog,elephant,guinea_pig,horse,human,macaque,marmoset,mouse,orangutan,panda,pig,rabbit,rat, lincRNA lincRNA A549@0,AG04450@0.0042085,BJ@0,GM12878@0.052844,H1HESC@0,HELAS3@0.0086575,HEPG2@0.0100045,HMEC@0.00745,HSMM@0.0271095,HUVEC@0,K562@0.0030915,MCF7@0,NHEK@0.0848873,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000249746.1 ENST00000502437.1 chr5:95549050-95550779 2 650 1077 intergenic -6.93 0 1,1,1 0 0,0,0 72.3261538461538 12.8560817084494 0 133 26.4623955431755 33.294 130.150769230769 25.8588672237697 33.49 0 0 chimp,dog,guinea_pig,human,macaque,marmoset,orangutan, lincRNA lincRNA A549@0.523,AG04450@0.033882,BJ@0,GM12878@0,H1HESC@0,HELAS3@0.051216,HEPG2@1.32085,HMEC@0,HSMM@0.0063115,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0.0237415,SKNSHRA@0.023473, 0 0 0 0 ENSG00000250158.1 ENST00000513926.1 chr5:95583480-95614455 2 404 30569 intergenic 0.09 0 0,0,0 0 0,0,0 18.1064356435644 10.6462429258399 0 13.3663366336634 15.7036540285911 4.499 14.0594059405941 16.6964244823187 10.528 0 0 cat,chimp,cow,dog,guinea_pig,horse,human,marmoset,orangutan,panda, lincRNA lincRNA A549@0,AG04450@0.023711,BJ@0.0218235,GM12878@0,H1HESC@0,HELAS3@0.0280625,HEPG2@0.024317,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0.0677983,NHLF@0,SKNSHRA@0.007303, 0 0 0 0 ENSG00000249880.1 ENST00000509602.1 chr5:95860971-95882222 3 554 20693 intronic -1.92 0 0,0,0 0 0,0,0 0 2.33315613975741 0 17.4873646209386 8.85671483110231 0 17.9530685920578 9.90909969554922 0 0 0 cat,chimp,dog,human,macaque,marmoset,orangutan,panda,rabbit, processed_transcript processed_transcript A549@0,AG04450@0,BJ@0.046423,GM12878@0.003054,H1HESC@0,HELAS3@0.007034,HEPG2@0.0184125,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0.078298,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000251314.1 ENST00000513158.1 chr5:95920197-95966704 2 573 45932 intronic -0.30 0 0,0,0 0 0,0,0 0 2.21716885831229 0 0 4.83111991639815 0 4.51134380453752 6.09984324653836 0 0 0 human, processed_transcript processed_transcript A549@0.070239,AG04450@0.279154,BJ@0.347685,GM12878@0.222552,H1HESC@0.001016,HELAS3@0.0847025,HEPG2@0.172051,HMEC@0.017185,HSMM@0.075201,HUVEC@0.124272,K562@0.070478,MCF7@0,NHEK@1.56089,NHLF@0.0541905,SKNSHRA@0.144815, 0 0 0 0 ENSG00000249180.1 ENST00000502568.1 chr5:96076783-96078402 2 563 1054 exonic -4.71 0 0,1,1 0 0,0,0 0 9.64705882352941 0 58.4689165186501 27.646110056926 22.184 53.6483126110124 34.3168880455408 24.747 0 0 cat,chimp,dog,elephant,guinea_pig,horse,human,macaque,marmoset,orangutan,panda,pig,rabbit,rat, antisense antisense A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0.004824,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000248734.1 ENST00000512856.1 chr5:96120481-96121703 2 991 229 exonic -0.47 0 0,0,1 0 0,0,0 54.7497477295661 0 67.896 116.49545913219 25.7860262008734 79.272 128.133198789102 13.4323144104804 88.793 0 0 chimp,elephant,human,macaque,mouse,orangutan,panda,pig, antisense antisense A549@0.978438,AG04450@0.588206,BJ@0.32214,GM12878@0.376722,H1HESC@0.0634685,HELAS3@0.568014,HEPG2@0.46306,HMEC@0.008247,HSMM@0.028327,HUVEC@0.709022,K562@0.277961,MCF7@0.222643,NHEK@0.77797,NHLF@0.146657,SKNSHRA@0.660262, 0 0 0 0 ENSG00000248758.1 ENST00000506562.1 chr5:96523794-96537584 2 191 13597 intergenic 0.91 0 0,0,0 0 0,0,0 0 1.53210266970655 8.05 0 3.36302125468853 0 0 6.00257409722733 9.583 0 0 chimp,elephant,human,macaque,orangutan,panda,rabbit, antisense antisense A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000251054.1 ENST00000505796.1 chr5:96559075-96563661 2 412 4172 intergenic 1.44 0 0,0,0 0 0,0,0 0 11.8106423777565 0 0 34.3906999041227 5.258 3.53883495145631 38.2303451581975 5.698 0 0 cat,chimp,cow,dog,horse,human,macaque,marmoset,orangutan,panda,pig,rabbit, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000250331.1 ENST00000504012.1 chr5:96840400-97006750 4 720 165624 intergenic -1.28 0 0,0,0 0 0,0,0 0 5.43679056175433 0 3.98333333333333 9.58254842293388 3.036 12.5875 11.3340518282375 7.011 0 0 chimp,cow,dog,elephant,guinea_pig,horse,human,macaque,marmoset,mouse,orangutan,panda,pig,rabbit, lincRNA lincRNA A549@0,AG04450@0.0137415,BJ@0.214921,GM12878@1.25164,H1HESC@0,HELAS3@0.0230615,HEPG2@0.0269665,HMEC@0,HSMM@0.023349,HUVEC@0.0048275,K562@0.0541305,MCF7@0,NHEK@0.00902067,NHLF@0.0106605,SKNSHRA@0.023099, 0 0 0 0 ENSG00000248202.1 ENST00000502324.1 chr5:97217124-97235457 2 262 18069 intergenic 0 0 0,0,0 0 0,0,0 0 1.89722729536776 0 0 3.55858099507444 3.72 0 7.63274115889092 6.018 0 0 chimp,horse,human,macaque,orangutan, lincRNA lincRNA A549@0.003079,AG04450@0.018685,BJ@0.092244,GM12878@0.691512,H1HESC@0,HELAS3@0,HEPG2@0.047941,HMEC@0,HSMM@0.0796265,HUVEC@0.0873755,K562@0.0103845,MCF7@0.0143235,NHEK@0.00819533,NHLF@0.0276305,SKNSHRA@0.0211, 0 0 0 0 ENSG00000248202.1 ENST00000513288.1 chr5:97217132-97258399 2 703 40562 intergenic -6.68 0 0,0,0 0 0,0,0 0 1.7048222474237 0 0 4.21428923623095 3.72 0 6.77819141067995 6.018 0 0 chimp,cow,dog,elephant,horse,human,macaque,marmoset,orangutan,panda,pig, lincRNA lincRNA A549@0.003079,AG04450@0.018685,BJ@0.092244,GM12878@0.691512,H1HESC@0,HELAS3@0,HEPG2@0.047941,HMEC@0,HSMM@0.0796265,HUVEC@0.0873755,K562@0.0103845,MCF7@0.0143235,NHEK@0.00819533,NHLF@0.0276305,SKNSHRA@0.0211, 0 0 0 0 ENSG00000248901.1 ENST00000505908.1 chr5:97421964-97496897 5 646 74279 intergenic -9.02 0 0,0,0 0 0,0,0 0 3.13221771967851 0 0 9.27418247418517 0 0 11.5932632372541 0 0 0 chimp,horse,human,macaque,marmoset,orangutan, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0.0785625,HELAS3@0,HEPG2@0,HMEC@0.00629,HSMM@0,HUVEC@0,K562@0.0192035,MCF7@0,NHEK@0.029681,NHLF@0,SKNSHRA@0.008543, 0 0 0 0 ENSG00000246763.2 ENST00000501938.2 chr5:98105322-98108792 2 2032 1436 exonic 2.01 0 0,0,1 0 0,0,0 105.059547244094 42.6309192200557 45.486 160.925196850394 110.814066852368 116.184 122.423720472441 116.50139275766 119.433 1 1 chimp,human,macaque,marmoset,orangutan, antisense antisense A549@0.0315545,AG04450@0.156388,BJ@0.053195,GM12878@0.0056825,H1HESC@0.042174,HELAS3@0.0673415,HEPG2@0.160492,HMEC@0.052672,HSMM@0.075147,HUVEC@0.125932,K562@0.0014325,MCF7@0.120487,NHEK@0.0571983,NHLF@0.104159,SKNSHRA@0.066954, 0 0 0 0 ENSG00000246763.2 ENST00000498871.2 chr5:98105322-98108829 3 1900 1603 exonic 2.01 0 0,0,1 0 0,0,0 112.358421052632 38.1896444167187 50.958 167.326842105263 104.933250155958 131.492 126.469473684211 109.650031191516 142.41 1 1 chimp,human,macaque,marmoset,orangutan, antisense antisense A549@0.0315545,AG04450@0.156388,BJ@0.053195,GM12878@0.0056825,H1HESC@0.042174,HELAS3@0.0673415,HEPG2@0.160492,HMEC@0.052672,HSMM@0.075147,HUVEC@0.125932,K562@0.0014325,MCF7@0.120487,NHEK@0.0571983,NHLF@0.104159,SKNSHRA@0.066954, 0 0 0 0 ENSG00000246763.2 ENST00000505362.1 chr5:98106462-98108776 2 531 1781 intronic 10.69 0 0,0,0 0 0,0,0 13.4745762711864 34.3728242560359 40.014 39.0847457627119 97.270634475014 107.704 37.1920903954802 103.088152723189 109.497 0 0 cat,chimp,elephant,horse,human,macaque,mouse,orangutan,panda,pig, antisense antisense A549@0.0315545,AG04450@0.156388,BJ@0.053195,GM12878@0.0056825,H1HESC@0.042174,HELAS3@0.0673415,HEPG2@0.160492,HMEC@0.052672,HSMM@0.075147,HUVEC@0.125932,K562@0.0014325,MCF7@0.120487,NHEK@0.0571983,NHLF@0.104159,SKNSHRA@0.066954, 0 0 0 0 ENSG00000246763.2 ENST00000505677.1 chr5:98106654-98109173 2 395 2122 intronic 8.53 0 1,1,1 0 0,0,0 0 28.8491988689915 50.958 17.579746835443 81.6394910461829 174.57 38.620253164557 86.5221489161169 199.108 0 0 chimp,elephant,guinea_pig,human,macaque,mouse,orangutan,panda,pig, antisense antisense A549@0.0315545,AG04450@0.156388,BJ@0.053195,GM12878@0.0056825,H1HESC@0.042174,HELAS3@0.0673415,HEPG2@0.160492,HMEC@0.052672,HSMM@0.075147,HUVEC@0.125932,K562@0.0014325,MCF7@0.120487,NHEK@0.0571983,NHLF@0.104159,SKNSHRA@0.066954, 0 0 0 0 ENSG00000246763.2 ENST00000515003.1 chr5:98106784-98108482 3 370 1324 intronic -1.58 1 0,0,1 0 0,0,0 0 46.2371601208459 0 46.5567567567568 113.246223564955 33.862 82.7189189189189 113.98413897281 31.388 0 0 chimp,dog,elephant,guinea_pig,horse,human,macaque,marmoset,orangutan,panda,pig, antisense antisense A549@0.0315545,AG04450@0.156388,BJ@0.053195,GM12878@0.0056825,H1HESC@0.042174,HELAS3@0.0673415,HEPG2@0.160492,HMEC@0.052672,HSMM@0.075147,HUVEC@0.125932,K562@0.0014325,MCF7@0.120487,NHEK@0.0571983,NHLF@0.104159,SKNSHRA@0.066954, 0 0 0 0 ENSG00000248489.1 ENST00000513175.1 chr5:98264875-98330717 3 475 65363 intergenic -2.13 0 0,1,0 1 0,0,0 0 1.52892309104539 63.657 8.05052631578947 3.38921102152594 171.83 8.45473684210526 12.4976362774046 149.338 0 0 chimp,horse,human,macaque,marmoset,orangutan,rabbit, processed_transcript processed_transcript A549@0.010486,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0.0073415,HUVEC@0,K562@0,MCF7@0.0112615,NHEK@0,NHLF@0,SKNSHRA@0.0512815, 0 0 0 0 ENSG00000249515.1 ENST00000510302.1 chr5:98885136-98913661 2 334 28189 intergenic -9.83 0 0,0,0 0 0,0,0 0 1.97204583348115 0 0 3.09592394196318 0 0 3.31760615843059 0 0 0 cat,chimp,dog,horse,human,macaque,marmoset,orangutan,panda, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0.0209285,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0.0073095,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000249787.1 ENST00000511468.1 chr5:99737145-99744603 3 560 6894 intergenic -8.83 0 0,0,0 0 0,0,0 0 6.85131998839571 0 0 6.64722947490572 0 0 11.7840150855817 0 0 0 chimp,human,macaque,orangutan,panda, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000247877.2 ENST00000499025.1 chr5:99785458-99870890 5 1564 83860 intergenic 1.59 0 0,1,0 1 0,0,0 0 0.665418554734081 68.655 0 2.80766754113999 116.431 0 3.60224183162414 112.692 0 0 chimp,cow,dog,elephant,horse,human,macaque,marmoset,orangutan,panda,pig,rabbit, lincRNA processed_transcript A549@0.022823,AG04450@0.0373585,BJ@0.0171695,GM12878@0.141894,H1HESC@0.047533,HELAS3@0.039165,HEPG2@0.013098,HMEC@0,HSMM@0.0249165,HUVEC@0.0087375,K562@0.029261,MCF7@0.041471,NHEK@0.0184817,NHLF@0.0061625,SKNSHRA@0.0179995, 0 0 0 0 ENSG00000247877.2 ENST00000504833.1 chr5:99786639-99870966 5 483 83836 intergenic -2.47 0 1,1,1 1 0,0,0 0 0.665609046233122 68.655 0 2.80847130111169 116.431 0 3.60327305692065 112.692 0 1 chimp,human,macaque,orangutan, lincRNA processed_transcript A549@0.022823,AG04450@0.0373585,BJ@0.0171695,GM12878@0.141894,H1HESC@0.047533,HELAS3@0.039165,HEPG2@0.013098,HMEC@0,HSMM@0.0249165,HUVEC@0.0087375,K562@0.029261,MCF7@0.041471,NHEK@0.0184817,NHLF@0.0061625,SKNSHRA@0.0179995, 0 0 0 0 ENSG00000250806.2 ENST00000511592.1 chr5:99989816-99993674 3 466 3388 intergenic -1.79 0 0,0,0 0 0,0,0 0 0 0 0 8.18742621015348 32.314 15.1802575107296 9.75 42.381 0 0 cat,human,pig, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000248261.1 ENST00000506058.1 chr5:101479781-101482276 2 323 2170 intergenic -1.15 1 0,0,1 0 0,0,0 0 0 0 0 15.2811059907834 0 0 17.3018433179723 0 0 1 chimp,human,orangutan, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000249017.1 ENST00000502494.1 chr5:101836245-101841372 2 525 4600 intergenic -8.41 0 0,0,1 0 0,0,0 0 0 0 0 0 5.355 0 0.633913043478261 5.712 0 0 chimp,dog,horse,human,macaque,marmoset,orangutan,pig, antisense antisense A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000249017.1 ENST00000509656.1 chr5:101840973-101841374 2 305 94 intergenic 1.78 0 0,0,1 0 0,0,0 0 0 0 0 0 0 0 0 0 0 0 chimp,dog,elephant,horse,human,macaque,marmoset,orangutan,panda, antisense antisense A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000250958.1 ENST00000504436.1 chr5:101917072-101953293 2 591 35628 intergenic -1.22 1 0,0,1 0 0,0,0 29.0355329949239 1.12832603570226 0 87.7038917089679 5.33560682609184 0 87.9238578680203 7.3518861569552 0 0 0 chimp,dog,guinea_pig,horse,human,macaque,marmoset,orangutan,pig,rabbit,rat, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0.003254,SKNSHRA@0, 0 0 0 0 ENSG00000247402.2 ENST00000501405.2 chr5:101941339-101941901 2 389 171 intergenic 0 0 0,0,0 0 0,0,0 0 0 0 0 0 3.51 0 0 3.692 0 1 chimp,human,macaque,orangutan, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 2 44 0 0 ENSG00000250682.1 ENST00000510145.1 chr5:101944860-102007263 2 942 61459 intergenic 0.73 0 0,0,1 0 0,0,0 0 18.2366130265706 0 0 23.4873330187605 0 0 22.5634813452871 0 0 0 human, lincRNA lincRNA A549@0.021166,AG04450@0,BJ@0,GM12878@0.002792,H1HESC@0.642481,HELAS3@0.116749,HEPG2@0.283088,HMEC@0,HSMM@0,HUVEC@0.0326705,K562@0.297336,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000250682.1 ENST00000505527.1 chr5:101944964-102007011 4 718 61323 intergenic 0.73 0 0,0,0 0 0,0,0 50.6963788300836 17.6665199028097 0 56.7409470752089 22.8560898847088 0 55.7660167130919 21.9419304339318 0 0 0 chimp,dog,elephant,horse,human,macaque,marmoset,orangutan,panda,pig, lincRNA lincRNA A549@0.021166,AG04450@0,BJ@0,GM12878@0.002792,H1HESC@0.642481,HELAS3@0.116749,HEPG2@0.283088,HMEC@0,HSMM@0,HUVEC@0.0326705,K562@0.297336,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000250682.1 ENST00000513815.1 chr5:101945095-102006987 3 579 61309 intergenic 0.73 0 0,0,0 0 0,0,0 0 18.2812311406156 0 0 23.5447976642907 0 0 22.6186856742077 0 0 0 chimp,dog,horse,human,macaque,marmoset,orangutan,pig, lincRNA lincRNA A549@0.021166,AG04450@0,BJ@0,GM12878@0.002792,H1HESC@0.642481,HELAS3@0.116749,HEPG2@0.283088,HMEC@0,HSMM@0,HUVEC@0.0326705,K562@0.297336,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000250682.1 ENST00000508339.1 chr5:101945261-102007168 3 516 61387 intergenic -1.55 0 0,0,0 0 0,0,0 70.5426356589147 17.648101389545 0 78.953488372093 22.8322609021454 0 77.5968992248062 21.9190545229446 0 1 1 chimp,human,macaque,marmoset,orangutan, lincRNA lincRNA A549@0.021166,AG04450@0,BJ@0,GM12878@0.002792,H1HESC@0.642481,HELAS3@0.116749,HEPG2@0.283088,HMEC@0,HSMM@0,HUVEC@0.0326705,K562@0.297336,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 10 6 0 0 ENSG00000248203.1 ENST00000507050.1 chr5:102581749-102589220 2 483 6986 intergenic 4.31 0 0,0,0 0 0,0,0 0 0 0 23.2525879917184 0.0709991411394217 0 24.231884057971 3.19023761809333 0 0 0 chimp,human,macaque,rabbit, antisense antisense A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0.845036,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000250567.1 ENST00000507948.1 chr5:102744642-102748212 2 553 3015 intergenic -6.72 0 0,0,0 0 0,0,0 0 42.4988391376451 43.264 14.5081374321881 46.7051409618574 377.356 18.7160940325497 51.2892205638474 135.567 0 0 cat,chimp,cow,dog,elephant,horse,human,macaque,marmoset,orangutan,panda,pig,rabbit, lincRNA lincRNA A549@0,AG04450@0,BJ@0.0087205,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0.0148185,NHEK@0,NHLF@0,SKNSHRA@0.016366, 0 0 0 0 ENSG00000248757.1 ENST00000503367.1 chr5:102865377-102877686 4 428 11875 intergenic -2.63 0 0,0,0 0 0,0,0 2.4018691588785 4.16631578947368 0 11.5747663551402 4.15048421052632 0 80.1542056074766 5.48631578947368 0 0 0 chimp,dog,elephant,horse,human,macaque,marmoset,orangutan,panda,pig,rabbit, lincRNA lincRNA A549@0.0071855,AG04450@0,BJ@0,GM12878@0.0100925,H1HESC@0,HELAS3@0,HEPG2@0.004932,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0.002955,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000251026.1 ENST00000514769.1 chr5:103415612-103441104 5 569 24915 intergenic 1.06 0 0,0,0 0 0,0,0 0 6.1757174392936 0 0 9.71378687537628 0 0 12.8059401966687 0 0 1 human,macaque,marmoset,orangutan, lincRNA lincRNA A549@0.568555,AG04450@0,BJ@0,GM12878@0.121114,H1HESC@0.052744,HELAS3@0.52812,HEPG2@0.889788,HMEC@0,HSMM@0,HUVEC@0,K562@2.05883,MCF7@0.210919,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000250165.1 ENST00000506337.1 chr5:103716257-103716740 2 353 128 intergenic 0 0 0,0,0 0 0,0,0 0 0 0 0 0 0 0 0 0 0 1 chimp,human,marmoset,orangutan, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0.027674,MCF7@0.0113265,NHEK@0.003596,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000251574.2 ENST00000524336.1 chr5:103718999-104246434 3 272 527159 intergenic -4.80 0 0,0,0 0 0,0,0 0 12.8880148114705 0 0 15.2682530318177 0 0 16.0605225368437 0 1 1 chimp,human,macaque,marmoset,orangutan, lincRNA lincRNA A549@0.0126245,AG04450@0,BJ@0,GM12878@0.022316,H1HESC@0,HELAS3@0.0672565,HEPG2@0.0460535,HMEC@0.00527,HSMM@0,HUVEC@0,K562@0.359453,MCF7@0.102545,NHEK@0.0189307,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000251574.2 ENST00000503650.1 chr5:103819905-104728671 3 774 907988 intergenic 1.04 0 0,1,0 0 0,0,0 301.56976744186 10.3592558491963 0 397.723514211886 11.5825087996758 0 349.381136950904 14.0881960995079 0 0 0 cat,chimp,cow,elephant,horse,marmoset,opossum,orangutan,rat, lincRNA lincRNA A549@0.0126245,AG04450@0,BJ@0,GM12878@0.022316,H1HESC@0,HELAS3@0.0672565,HEPG2@0.0460535,HMEC@0.00527,HSMM@0,HUVEC@0,K562@0.359453,MCF7@0.102545,NHEK@0.0189307,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000251574.2 ENST00000506976.1 chr5:103966088-104109523 3 461 142970 intergenic 7.09 0 0,0,0 0 0,0,0 205.236442516269 12.4067916346087 0 196.427331887202 13.8693432188571 0 163.698481561822 15.103350353221 0 0 0 chimp,cow,dog,elephant,guinea_pig,horse,human,macaque,marmoset,mouse,orangutan,panda,pig,platypus,rabbit,rat, lincRNA lincRNA A549@0.0126245,AG04450@0,BJ@0,GM12878@0.022316,H1HESC@0,HELAS3@0.0672565,HEPG2@0.0460535,HMEC@0.00527,HSMM@0,HUVEC@0,K562@0.359453,MCF7@0.102545,NHEK@0.0189307,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000251574.2 ENST00000505824.1 chr5:103966237-104109492 3 401 142850 intergenic 7.09 0 0,0,0 0 0,0,0 158.738154613466 12.417213860693 0 171.441396508728 13.8809940497025 0 130.087281795511 15.1160378018901 0 0 0 chimp,cow,dog,elephant,horse,human,macaque,marmoset,mouse,opossum,orangutan,pig,rabbit,rat, lincRNA lincRNA A549@0.0126245,AG04450@0,BJ@0,GM12878@0.022316,H1HESC@0,HELAS3@0.0672565,HEPG2@0.0460535,HMEC@0.00527,HSMM@0,HUVEC@0,K562@0.359453,MCF7@0.102545,NHEK@0.0189307,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000251574.2 ENST00000524083.1 chr5:104072462-104075242 3 313 2463 intergenic 0 0 0,0,0 0 0,0,0 0 96.2241169305725 0 0 77.8501827040195 0 0 73.3580998781973 0 0 0 cat,chimp,cow,dog,elephant,horse,human,macaque,marmoset,orangutan,panda,pig,rabbit, lincRNA lincRNA A549@0.0126245,AG04450@0,BJ@0,GM12878@0.022316,H1HESC@0,HELAS3@0.0672565,HEPG2@0.0460535,HMEC@0.00527,HSMM@0,HUVEC@0,K562@0.359453,MCF7@0.102545,NHEK@0.0189307,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000251574.2 ENST00000523434.1 chr5:104074955-104109397 4 482 33954 intergenic 7.09 0 0,0,0 0 0,0,0 132.0622406639 14.3347764622725 0 142.630705394191 15.2335807268658 0 108.226141078838 14.3942098132768 0 0 0 cat,chimp,cow,dog,elephant,horse,human,macaque,marmoset,mouse,orangutan,panda,pig,platypus,rabbit,rat, lincRNA lincRNA A549@0.0126245,AG04450@0,BJ@0,GM12878@0.022316,H1HESC@0,HELAS3@0.0672565,HEPG2@0.0460535,HMEC@0.00527,HSMM@0,HUVEC@0,K562@0.359453,MCF7@0.102545,NHEK@0.0189307,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000251574.2 ENST00000524159.1 chr5:104074962-104082310 3 357 6987 intergenic -0.97 0 0,0,0 0 0,0,0 0 0 0 0 0 0 0 0 0 0 0 cat,chimp,cow,dog,elephant,horse,human,macaque,marmoset,orangutan,panda, lincRNA lincRNA A549@0.0126245,AG04450@0,BJ@0,GM12878@0.022316,H1HESC@0,HELAS3@0.0672565,HEPG2@0.0460535,HMEC@0.00527,HSMM@0,HUVEC@0,K562@0.359453,MCF7@0.102545,NHEK@0.0189307,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000251574.2 ENST00000518276.1 chr5:104079393-104109361 4 468 29494 intergenic 7.09 0 0,0,1 0 0,0,0 136.012820512821 16.5024411744762 0 146.897435897436 17.5371601003594 0 111.463675213675 16.5708618702109 0 0 0 chimp,guinea_pig,horse,human,macaque,marmoset,orangutan, lincRNA lincRNA A549@0.0126245,AG04450@0,BJ@0,GM12878@0.022316,H1HESC@0,HELAS3@0.0672565,HEPG2@0.0460535,HMEC@0.00527,HSMM@0,HUVEC@0,K562@0.359453,MCF7@0.102545,NHEK@0.0189307,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000251574.2 ENST00000522838.1 chr5:104098932-104109485 2 323 10228 intergenic 7.09 0 0,0,1 0 0,0,0 290.823529411765 18.7913570590536 0 309.325077399381 22.9466171294486 0 232.040247678019 23.272096206492 0 0 0 chimp,human,macaque,marmoset,mouse,opossum,rabbit,rat, lincRNA lincRNA A549@0.0126245,AG04450@0,BJ@0,GM12878@0.022316,H1HESC@0,HELAS3@0.0672565,HEPG2@0.0460535,HMEC@0.00527,HSMM@0,HUVEC@0,K562@0.359453,MCF7@0.102545,NHEK@0.0189307,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000253776.1 ENST00000523745.1 chr5:104109342-104135473 2 565 25564 intergenic -3.18 1 0,0,0 0 0,0,0 0 5.90846502894696 0 0 1.73634798936004 0 0 4.08864027538726 0 0 0 NA lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0.022546,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000253584.1 ENST00000517758.1 chr5:104253193-104344618 2 462 90961 intergenic -0.10 0 0,0,1 0 0,0,0 0 8.67402513164983 0 0 7.66104154527765 0 0 9.66837435824145 0 0 1 chimp,human,macaque,marmoset, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0.0003375,H1HESC@0,HELAS3@0.0629765,HEPG2@0.0268785,HMEC@0,HSMM@0,HUVEC@0,K562@1.94515,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000253584.1 ENST00000522464.1 chr5:104308988-104582065 5 784 272285 intergenic 2.86 0 0,1,0 0 0,0,0 0 8.51475843325927 0 0 10.5050920910076 0 0 13.5138402776503 0 0 1 chimp,human, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0.0003375,H1HESC@0,HELAS3@0.0629765,HEPG2@0.0268785,HMEC@0,HSMM@0,HUVEC@0,K562@1.94515,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000251027.1 ENST00000513273.1 chr5:106150898-106346715 4 568 195243 intergenic -6.66 0 0,1,1 0 0,0,0 64.5052816901408 26.3956505482911 50.856 63.7922535211268 27.2481369370477 109.944 78.2746478873239 30.1660494870495 115.183 0 0 cat,chimp,cow,dog,elephant,guinea_pig,horse,human,macaque,marmoset,mouse,opossum,orangutan,pig,platypus,rabbit,rat, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0.0447705,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000251027.1 ENST00000505997.1 chr5:106150906-106316570 3 599 165061 intergenic -6.66 0 0,0,1 0 0,0,0 52.873121869783 26.2840707374849 0 53.0784641068447 27.102507557812 0 66.6644407345576 30.2023312593526 0 0 0 cat,chimp,dog,elephant,horse,human,macaque,marmoset,mouse,opossum,orangutan,panda,pig,rabbit,rat, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0.0447705,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000249959.1 ENST00000509458.1 chr5:107035536-107052407 5 800 16063 intergenic 5.49 0 0,1,0 0 0,0,0 74.0025 50.3778870696632 0 59.23625 54.4737595716865 0 59.97875 72.8842059391147 0 0 0 chimp,cow,elephant,horse,human,macaque,marmoset,mouse,orangutan,panda,pig, lincRNA lincRNA A549@0,AG04450@0.0055685,BJ@0,GM12878@0.018444,H1HESC@0.02161,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0.010224,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0.131369,SKNSHRA@0, 0 0 0 0 ENSG00000249959.1 ENST00000502287.1 chr5:107035658-107052542 5 789 16087 intergenic -1.10 0 0,0,0 0 0,0,0 0 54.0571890346242 0 0 57.3771989805433 0 0 75.8164977932492 0 0 0 chimp,human,macaque,marmoset,orangutan,pig, lincRNA lincRNA A549@0,AG04450@0.0055685,BJ@0,GM12878@0.018444,H1HESC@0.02161,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0.010224,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0.131369,SKNSHRA@0, 0 0 0 0 ENSG00000245338.1 ENST00000500295.1 chr5:108061406-108063994 2 2442 144 intergenic 3.00 0 1,1,1 0 0,0,0 19.4922194922195 0 11.88 9.66994266994267 0 0 13.1494676494676 0 0 0 1 chimp,human,macaque,orangutan, lincRNA lincRNA A549@0.008089,AG04450@0.0158965,BJ@0.0264245,GM12878@0.0134395,H1HESC@0.015218,HELAS3@0.0218415,HEPG2@0.0026525,HMEC@0.016754,HSMM@0.023706,HUVEC@0.056179,K562@0.020211,MCF7@0.0141525,NHEK@0.002701,NHLF@0.007957,SKNSHRA@0.0099735, 0 0 0 0 ENSG00000250383.1 ENST00000510935.1 chr5:108153742-108166491 2 396 12351 intronic -2.06 0 0,0,0 0 0,0,0 0 0 0 0 1.10452594931584 0 0 1.59776536312849 0 0 1 chimp,human,macaque,orangutan, antisense antisense A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000249476.1 ENST00000512693.1 chr5:108572821-108662070 4 5467 83776 intergenic 3.41 0 0,0,0 0 0,0,0 0 2.12194423223835 0 3.77867203219316 6.60275019098549 4.734 4.30272544357051 9.6877506684492 27.474 0 1 chimp,human,macaque,orangutan, lincRNA lincRNA A549@0.182889,AG04450@0.267504,BJ@0.280604,GM12878@0.458482,H1HESC@0.104608,HELAS3@0.271435,HEPG2@0.385084,HMEC@0.059983,HSMM@0.145066,HUVEC@0.561974,K562@0.0978135,MCF7@0.135132,NHEK@0.198792,NHLF@0.0477375,SKNSHRA@0.479391, 0 0 0 0 ENSG00000251367.1 ENST00000509496.1 chr5:108803054-108803653 1 599 0 intergenic -12.67 0 0,0,0 0 0,0,0 0 0 0 0 0 0 0 0 0 0 0 cat,chimp,dog,horse,human,macaque,marmoset,orangutan,panda,pig, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000248876.1 ENST00000505002.1 chr5:108806544-108807287 1 743 0 intergenic -8.42 0 0,1,1 0 0,0,0 118.21534320323 0 0 153.475100942127 0 0 166.183041722746 0 0 0 0 cat,chimp,cow,dog,elephant,guinea_pig,horse,human,macaque,marmoset,mouse,orangutan,panda,pig,rabbit,rat, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000248440.1 ENST00000506330.1 chr5:108833578-108834809 2 564 665 intergenic -7.21 0 0,1,1 0 0,0,0 0 0 13.145 4.48404255319149 1.1187969924812 0 4.66666666666667 1.16842105263158 0 0 0 cat,chimp,cow,dog,elephant,guinea_pig,horse,human,marmoset,orangutan,panda, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0.0147495,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000248428.1 ENST00000507627.1 chr5:110306650-110344598 6 691 37247 intergenic -4.74 0 0,0,0 0 0,0,0 0 0 0 0 0.870486213654791 0 0 22.466963782318 0 0 0 chimp,horse,human,macaque,orangutan, processed_transcript processed_transcript A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0.015966,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000253613.1 ENST00000507269.2 chr5:110411896-110427813 5 623 15286 exonic 5.63 1 0,1,1 0 0,0,0 0 2.71228575166819 54.648 7.55056179775281 1.32101269135156 55.654 7.93579454253612 2.2627240612325 66.589 0 0 chimp,elephant,horse,human,macaque,marmoset,orangutan,pig, antisense antisense A549@0,AG04450@0.018026,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0.004135,NHLF@0,SKNSHRA@0.007238, 0 0 0 0 ENSG00000249318.1 ENST00000511981.1 chr5:110601507-110605787 2 436 3842 intronic 3.00 0 0,0,0 0 0,0,0 0 0 0 0 1.99115044247788 5.61 0 2.12389380530973 5.984 0 0 chimp,elephant,horse,human,macaque,marmoset,orangutan,pig,rat, antisense antisense A549@0,AG04450@0,BJ@0,GM12878@0.0053515,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0.059844,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000248268.1 ENST00000504081.1 chr5:110613215-110638265 3 562 24484 intronic 1.79 0 0,0,0 0 0,0,0 0 14.1329031204052 0 0 7.22749550727005 0 0 9.17517562489789 0 0 1 human,macaque,marmoset, antisense antisense A549@0.0293325,AG04450@0,BJ@0,GM12878@0.020228,H1HESC@0.231053,HELAS3@0,HEPG2@0.0193115,HMEC@0,HSMM@0,HUVEC@0,K562@0.430673,MCF7@0.0651985,NHEK@0.0635463,NHLF@0,SKNSHRA@0.0482365, 10 6 0 0 ENSG00000246859.2 ENST00000500779.2 chr5:110847924-111075423 7 5518 221969 exonic 11.86 1 0,1,0 1 0,0,0 25.7848858281986 13.1592069162811 0 13.8802102210946 11.5421432722587 0 14.3474084813338 13.8885655204105 0 1 1 chimp,human,macaque,marmoset,orangutan, lincRNA processed_transcript A549@0.025601,AG04450@0.047327,BJ@0.0504255,GM12878@0.117639,H1HESC@0.0803345,HELAS3@0.346545,HEPG2@0.073165,HMEC@0.01334,HSMM@0.0035125,HUVEC@0.02619,K562@0.0230605,MCF7@0.0208065,NHEK@0.051981,NHLF@0.0116075,SKNSHRA@0.05709, 0 0 0 0 ENSG00000246859.2 ENST00000513221.1 chr5:111066086-111067878 2 521 1269 exonic -3.61 0 0,1,0 0 0,0,0 166.520153550864 299.674546887313 432.042 172.558541266795 259.190701339637 404.486 182.312859884837 263.960598896769 421.358 0 0 cat,chimp,cow,dog,elephant,guinea_pig,horse,human,macaque,marmoset,orangutan,panda,pig, lincRNA processed_transcript A549@0.025601,AG04450@0.047327,BJ@0.0504255,GM12878@0.117639,H1HESC@0.0803345,HELAS3@0.346545,HEPG2@0.073165,HMEC@0.01334,HSMM@0.0035125,HUVEC@0.02619,K562@0.0230605,MCF7@0.0208065,NHEK@0.051981,NHLF@0.0116075,SKNSHRA@0.05709, 0 0 0 0 ENSG00000250095.1 ENST00000507222.1 chr5:111248205-111353003 4 606 104186 intronic -3.12 1 0,1,0 0 0,0,0 0 13.72394563569 0 6.31023102310231 10.0235252337166 16.395 6.62706270627063 13.0248401896608 19.715 0 0 cat,chimp,cow,dog,elephant,guinea_pig,horse,human,macaque,marmoset,orangutan,pig, antisense antisense A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000250095.1 ENST00000508389.1 chr5:111275750-111284685 2 209 8724 intronic 0 0 0,0,0 0 0,0,0 0 24.7812929848693 0 76.4019138755981 25.3212975699221 5.943 80.1626794258373 29.0737047226043 5.964 0 0 cat,chimp,cow,dog,elephant,guinea_pig,horse,human,macaque,marmoset,mouse,orangutan,panda,rat, antisense antisense A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000250095.1 ENST00000503242.1 chr5:111305149-111353006 3 408 47445 intronic -0.82 1 0,0,0 0 0,0,0 0 16.740583833913 0 35.6102941176471 12.7008325429445 2.805 37.7549019607843 15.7754241753609 15.635 0 0 cat,chimp,cow,dog,elephant,guinea_pig,horse,human,macaque,marmoset,orangutan,pig, antisense antisense A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000224032.2 ENST00000413221.2 chr5:111496223-111499973 3 2966 780 exonic 2.54 1 0,1,1 0 0,1,0 18.2886041807148 67.0115384615385 0 13.2478084962913 40.8320512820513 0 14.5465273095078 36.5192307692308 0 1 1 chimp,human,macaque,marmoset,orangutan, lincRNA non_coding A549@14.784,AG04450@6.34172,BJ@9.79271,GM12878@6.68268,H1HESC@24.9066,HELAS3@9.96442,HEPG2@9.62119,HMEC@4.06171,HSMM@3.7582,HUVEC@8.66327,K562@8.69069,MCF7@9.52264,NHEK@4.68698,NHLF@2.39488,SKNSHRA@6.11852, 0 0 0 0 ENSG00000224032.2 ENST00000427306.2 chr5:111496226-111497999 2 1365 406 intergenic 2.54 1 0,1,1 0 0,1,0 0 128.741379310345 0 16.1062271062271 77.2684729064039 0 16.5721611721612 68.8546798029557 0 0 0 cat,chimp,elephant,horse,human,macaque,marmoset,orangutan, lincRNA non_coding A549@14.784,AG04450@6.34172,BJ@9.79271,GM12878@6.68268,H1HESC@24.9066,HELAS3@9.96442,HEPG2@9.62119,HMEC@4.06171,HSMM@3.7582,HUVEC@8.66327,K562@8.69069,MCF7@9.52264,NHEK@4.68698,NHLF@2.39488,SKNSHRA@6.11852, 0 0 0 0 ENSG00000224032.2 ENST00000442823.2 chr5:111496589-111498021 2 576 854 intergenic 0.10 1 1,1,1 1 0,1,0 0 61.2049180327869 0 2.73958333333333 38.4133489461358 18.973 2.83333333333333 34.596018735363 19.399 0 0 chimp,human,macaque,marmoset,orangutan,panda, lincRNA non_coding A549@14.784,AG04450@6.34172,BJ@9.79271,GM12878@6.68268,H1HESC@24.9066,HELAS3@9.96442,HEPG2@9.62119,HMEC@4.06171,HSMM@3.7582,HUVEC@8.66327,K562@8.69069,MCF7@9.52264,NHEK@4.68698,NHLF@2.39488,SKNSHRA@6.11852, 0 0 0 0 ENSG00000224032.2 ENST00000508590.1 chr5:111496631-111498008 3 289 1084 intergenic 0 1 1,1,1 1 0,1,0 0 48.2186346863469 0 7.94117647058824 29.3809963099631 18.973 8.39792387543253 26.2776752767528 19.399 0 0 cat,chimp,cow,elephant,human,macaque,marmoset,orangutan,panda, lincRNA non_coding A549@14.784,AG04450@6.34172,BJ@9.79271,GM12878@6.68268,H1HESC@24.9066,HELAS3@9.96442,HEPG2@9.62119,HMEC@4.06171,HSMM@3.7582,HUVEC@8.66327,K562@8.69069,MCF7@9.52264,NHEK@4.68698,NHLF@2.39488,SKNSHRA@6.11852, 0 0 0 0 ENSG00000250882.1 ENST00000514411.1 chr5:111509267-111511245 2 455 1521 intronic -15.44 0 0,0,0 0 0,0,0 0 24.8573307034845 0 0 13.0394477317554 0 0 24.5378040762656 5.346 0 0 cat,chimp,cow,dog,elephant,horse,human,macaque,marmoset,orangutan,panda,pig, antisense antisense A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0.0045395,HELAS3@0,HEPG2@0.005969,HMEC@0,HSMM@0,HUVEC@0,K562@0.0236455,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000251187.1 ENST00000515563.1 chr5:111527717-111532693 3 585 4387 exonic 1.98 1 0,0,1 0 0,0,0 29.9555555555556 7.42147253248233 0 52.8376068376068 10.2755869614771 0 53.6478632478633 11.714611351721 0 0 0 chimp,elephant,human,orangutan, antisense antisense A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0.004731,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000251187.1 ENST00000506875.1 chr5:111527883-111542760 4 490 14381 exonic -4.25 0 0,0,0 0 0,0,0 87.1408163265306 6.4455183923232 0 110.661224489796 9.21674431541618 0 118.273469387755 10.7480008344343 0 0 0 chimp,cow,horse,human,macaque,marmoset,orangutan, antisense antisense A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0.004731,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000251187.1 ENST00000505825.1 chr5:111540134-111545836 2 393 5307 exonic -4.25 1 0,1,0 0 0,0,0 37.7608142493639 16.9700395703787 10.07 41.3969465648855 23.5421141888072 20.079 64.2442748091603 28.5641605426795 18.795 0 0 cat,chimp,cow,elephant,horse,human,macaque,marmoset,panda,pig,rat, antisense antisense A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0.004731,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000251076.1 ENST00000504004.1 chr5:111563980-111593006 4 707 28313 intronic -0.89 1 0,0,0 0 0,0,0 15.6152758132956 8.02528873662275 0 64.7906647807638 8.63161798467135 0 67.033946251768 11.4049376611451 0 0 0 cat,chimp,cow,elephant,guinea_pig,horse,human,marmoset,mouse,orangutan,pig, antisense antisense A549@0.0122115,AG04450@0,BJ@0,GM12878@0.024528,H1HESC@0.0116705,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0.0069085,MCF7@0,NHEK@0.0331777,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000257082.1 ENST00000541361.1 chr5:111857200-111868286 2 2797 8287 intergenic 6.42 0 0,1,0 0 0,0,0 0 0 0 0 0 0 0 0 0 0 0 NA lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@2.99697,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0.003673,NHEK@0.00182433,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000250358.1 ENST00000508879.1 chr5:111964133-111967797 4 611 3047 intergenic -0.67 0 0,0,0 0 0,0,0 26.5139116202946 4.01706596652445 0 65.2765957446809 15.9750574335412 0 77.0294599018003 20.3098129307516 6.337 0 0 chimp,horse,human,macaque,marmoset,orangutan, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0.015109,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0.018123,NHEK@0,NHLF@0,SKNSHRA@0.005062, 0 0 0 0 ENSG00000250358.1 ENST00000507565.1 chr5:111964297-111966399 3 446 1652 intergenic -0.67 0 0,1,0 0 0,0,0 0 0 16.2 13.6636771300448 17.361985472155 35.363 14.1300448430493 21.1325665859564 48.749 0 0 cat,chimp,cow,horse,human,macaque,marmoset,orangutan,panda, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0.015109,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0.018123,NHEK@0,NHLF@0,SKNSHRA@0.005062, 0 0 0 0 ENSG00000250358.1 ENST00000513687.1 chr5:111964554-111966262 2 539 1167 intergenic -0.67 0 0,0,0 0 0,0,0 0 0 16.2 6.65677179962894 0 65.389 6.84972170686456 0 85.044 0 0 chimp,elephant,human,macaque,marmoset,orangutan, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0.015109,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0.018123,NHEK@0,NHLF@0,SKNSHRA@0.005062, 0 0 0 0 ENSG00000232633.3 ENST00000416046.2 chr5:112658725-112772038 5 3356 109949 exonic 8.98 0 0,0,0 0 0,1,0 53.5053635280095 9.12851412927812 0 163.612336114422 8.10560350708056 0 139.473480333731 11.2735450072306 0 0 0 cat,chimp,cow,horse,human,macaque,marmoset,orangutan,pig, antisense antisense A549@0,AG04450@0.024893,BJ@0.00145,GM12878@0,H1HESC@0.0378135,HELAS3@0,HEPG2@0.010088,HMEC@0.016239,HSMM@0.0019545,HUVEC@0.040635,K562@0,MCF7@0.006062,NHEK@0.0471303,NHLF@0.002017,SKNSHRA@0.0263445, 0 0 0 0 ENSG00000232633.3 ENST00000383058.4 chr5:112769275-112770626 1 1351 0 exonic 7.80 0 0,0,1 0 0,1,0 104.989637305699 0 0 355.582531458179 0 3.825 254.730569948187 0 55.383 0 0 cat,chimp,cow,dog,elephant,guinea_pig,horse,human,macaque,marmoset,mouse,opossum,orangutan,panda,pig,platypus,rabbit,rat, antisense antisense A549@0,AG04450@0.024893,BJ@0.00145,GM12878@0,H1HESC@0.0378135,HELAS3@0,HEPG2@0.010088,HMEC@0.016239,HSMM@0.0019545,HUVEC@0.040635,K562@0,MCF7@0.006062,NHEK@0.0471303,NHLF@0.002017,SKNSHRA@0.0263445, 0 0 0 0 ENSG00000232633.3 ENST00000510381.2 chr5:112770776-112772871 2 1696 397 intronic 2.69 0 0,0,0 0 0,0,0 0 0 179.564 2.48584905660377 0 544.391 2.65625 0 400.158 1 1 chimp,human,macaque,marmoset,orangutan, antisense antisense A549@0,AG04450@0.024893,BJ@0.00145,GM12878@0,H1HESC@0.0378135,HELAS3@0,HEPG2@0.010088,HMEC@0.016239,HSMM@0.0019545,HUVEC@0.040635,K562@0,MCF7@0.006062,NHEK@0.0471303,NHLF@0.002017,SKNSHRA@0.0263445, 0 0 0 0 ENSG00000251628.1 ENST00000512927.1 chr5:113391703-113392871 2 568 598 intergenic 3.35 0 0,1,0 0 0,0,0 0 0 111.687 26.6478873239437 7.25418060200669 44.793 28.8116197183099 7.41973244147157 45.307 0 0 cat,chimp,cow,dog,elephant,guinea_pig,horse,human,macaque,marmoset,mouse,orangutan,pig,rat, lincRNA lincRNA A549@0,AG04450@0,BJ@0.0113545,GM12878@0,H1HESC@0.130444,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000246316.3 ENST00000514115.1 chr5:113824694-114004107 5 438 178967 exonic 2.65 0 0,0,0 0 0,0,0 116.429223744292 8.29112070940453 0 122.7100456621 8.36172590477574 0 132.570776255708 10.3111858610805 0 0 0 chimp,cow,dog,elephant,guinea_pig,horse,human,macaque,marmoset,mouse,opossum,orangutan,panda,pig,rat, antisense antisense A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000251542.1 ENST00000506392.1 chr5:113911738-113915667 2 749 3178 intergenic -5.58 0 0,0,0 0 0,0,0 0 0 16.013 0 0 0 0 0 0 0 0 chimp,guinea_pig,horse,human,macaque,marmoset,orangutan,panda,pig, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000246316.3 ENST00000506265.1 chr5:113998658-114004103 4 588 4851 intergenic -5.11 0 0,0,0 0 0,0,0 0 18.439084724799 0 0 16.5271078128221 0 0 58.8785817357246 0 0 0 chimp,dog,elephant,guinea_pig,horse,human,macaque,marmoset,orangutan,pig, antisense antisense A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000251132.1 ENST00000509718.1 chr5:114366970-114367591 1 621 0 intergenic -0.01 0 0,1,0 0 0,0,0 66.5265700483092 0 0 22.6537842190016 0 4.86 44.2850241545894 0 2.176 0 0 cat,chimp,cow,dog,elephant,guinea_pig,horse,human,macaque,marmoset,mouse,orangutan,panda,rabbit, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0.0145305,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000250242.1 ENST00000515822.1 chr5:114423589-114424172 1 583 0 intergenic 0 0 0,0,0 0 0,0,0 0 0 0 0 0 3.315 5.83533447684391 0 3.445 0 0 chimp,horse,human,macaque,marmoset,orangutan, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0.0368455, 0 0 0 0 ENSG00000250472.1 ENST00000503723.1 chr5:114484461-114485341 1 880 0 intronic -9.51 0 0,1,0 0 0,0,0 61.6806818181818 0 0 56.7568181818182 0 2.728 74.0954545454545 0 2.849 0 0 cat,chimp,cow,dog,elephant,guinea_pig,horse,human,macaque,marmoset,mouse,opossum,orangutan,panda,pig,rabbit, sense_intronic sense_intronic A549@0.0076535,AG04450@0,BJ@0,GM12878@0,H1HESC@0.004971,HELAS3@0.0051805,HEPG2@0.0045465,HMEC@0.004128,HSMM@0.0020485,HUVEC@0,K562@0.002344,MCF7@0.004264,NHEK@0,NHLF@0,SKNSHRA@0.004534, 0 0 0 0 ENSG00000249791.1 ENST00000514544.1 chr5:114524260-114524629 1 369 0 intergenic -8.81 0 0,1,0 0 0,0,0 0 0 15.105 0 0 10.645 7.90243902439024 0 5.508 0 0 chimp,cow,dog,elephant,horse,human,macaque,marmoset,orangutan,panda,pig, antisense antisense A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000248175.1 ENST00000507241.1 chr5:114539713-114541943 1 2230 0 intergenic -0.86 0 0,0,1 0 0,0,0 9.00269058295964 0 20.54 0 0 0 0 0 0 0 0 chimp,horse,human,marmoset,orangutan,pig, lincRNA lincRNA A549@0.662536,AG04450@0.674291,BJ@0.37114,GM12878@0.79109,H1HESC@0.452641,HELAS3@1.36539,HEPG2@0.438561,HMEC@0.203807,HSMM@0.319571,HUVEC@0.379463,K562@0.680012,MCF7@0.29271,NHEK@0.67238,NHLF@0.200912,SKNSHRA@0.778698, 0 0 0 0 ENSG00000249249.1 ENST00000506485.1 chr5:114937754-114938902 2 562 584 exonic -3.51 0 0,1,0 0 0,0,0 0 0 0 0 3.92979452054795 0 0 3.99143835616438 0 0 0 chimp,elephant,human,macaque,marmoset,orangutan,pig, antisense antisense A549@0.067297,AG04450@0.0620325,BJ@0.0418235,GM12878@0.108984,H1HESC@0.0287905,HELAS3@0.046585,HEPG2@0.0158115,HMEC@0,HSMM@0.052132,HUVEC@0.079951,K562@0.006598,MCF7@0.054115,NHEK@0,NHLF@0.0436025,SKNSHRA@0, 0 0 0 0 ENSG00000249249.1 ENST00000508517.1 chr5:114937941-114955975 3 536 17494 exonic -3.78 0 1,1,1 0 0,0,0 0 44.7520292671773 0 0 31.2527723791014 0 0 29.1709157425403 0 1 1 chimp,human,macaque,marmoset,orangutan, antisense antisense A549@0.067297,AG04450@0.0620325,BJ@0.0418235,GM12878@0.108984,H1HESC@0.0287905,HELAS3@0.046585,HEPG2@0.0158115,HMEC@0,HSMM@0.052132,HUVEC@0.079951,K562@0.006598,MCF7@0.054115,NHEK@0,NHLF@0.0436025,SKNSHRA@0, 0 0 0 0 ENSG00000249249.1 ENST00000515570.1 chr5:114938742-114956356 3 762 16848 exonic -3.78 0 0,0,1 0 0,0,0 203.989501312336 46.4679487179487 0 186.692913385827 32.3148741690408 2.295 181.608923884514 30.1510565052232 2.331 0 0 cat,chimp,cow,dog,elephant,guinea_pig,horse,human,macaque,marmoset,mouse,opossum,orangutan,panda,pig,rat, antisense antisense A549@0.067297,AG04450@0.0620325,BJ@0.0418235,GM12878@0.108984,H1HESC@0.0287905,HELAS3@0.046585,HEPG2@0.0158115,HMEC@0,HSMM@0.052132,HUVEC@0.079951,K562@0.006598,MCF7@0.054115,NHEK@0,NHLF@0.0436025,SKNSHRA@0, 0 0 0 0 ENSG00000249021.1 ENST00000333482.4 chr5:115027159-115027864 1 705 0 intergenic -1.63 0 0,0,0 0 0,0,0 0 0 0 0 0 0 0 0 0 0 0 cat,chimp,dog,horse,human,macaque,marmoset,orangutan,panda,rabbit, lincRNA lincRNA A549@0,AG04450@0.017521,BJ@0,GM12878@0.33009,H1HESC@0.0828805,HELAS3@0.15372,HEPG2@0.078475,HMEC@0,HSMM@0,HUVEC@0.0409295,K562@0,MCF7@0,NHEK@0.016679,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000248709.1 ENST00000512900.1 chr5:115091341-115091983 1 642 0 intergenic -3.66 0 0,0,0 0 0,0,0 0 0 0 0 0 7.056 0 0 7.2 0 0 chimp,dog,elephant,guinea_pig,human,macaque,orangutan, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000248017.1 ENST00000499037.1 chr5:115150892-115152356 2 816 646 exonic 0.80 0 0,0,1 0 0,0,0 0 45.8777089783282 0 0 110.611455108359 0 0 127.597523219814 0 0 0 chimp,cow,horse,human,macaque,marmoset,orangutan,panda,pig, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0.003025,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000251570.1 ENST00000504222.1 chr5:115389707-115394634 2 355 4570 intergenic 0 0 0,0,0 0 0,0,1 239.619718309859 0.37199124726477 5.1 347.622535211268 0.289715536105033 0 399.149295774648 0.533916849015317 6.072 0 0 cat,chimp,cow,dog,elephant,guinea_pig,horse,human,macaque,mouse,orangutan,panda,pig,rabbit,rat, lincRNA lincRNA A549@0.220269,AG04450@0.037218,BJ@0,GM12878@0.024425,H1HESC@0,HELAS3@0.133395,HEPG2@0.053485,HMEC@0,HSMM@0.0434535,HUVEC@0.0136215,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0.187364, 0 0 0 0 ENSG00000250015.1 ENST00000507813.1 chr5:115638051-115639831 2 204 1574 intergenic 7.49 0 0,0,0 0 0,0,0 0 4.82210927573062 0 0 16.3246505717916 0 0 19.2573062261754 0 0 0 cat,chimp,dog,horse,human,macaque,marmoset,orangutan,panda, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000248445.1 ENST00000512128.1 chr5:115783243-115785557 2 477 1835 exonic 9.73 0 0,1,0 0 0,0,0 256.788259958071 138.821798365123 655.629 253.870020964361 96.6370572207084 472.714 271.498951781971 93.2043596730245 471.989 0 0 chimp,cow,dog,elephant,guinea_pig,human,macaque,marmoset,mouse,opossum,orangutan,panda,pig,platypus,rabbit,rat, antisense antisense A549@0.204437,AG04450@0.151721,BJ@0.356933,GM12878@1.53803,H1HESC@0.0401365,HELAS3@0.302272,HEPG2@0.50403,HMEC@0.070063,HSMM@0.0210495,HUVEC@0.283195,K562@0.527738,MCF7@0.366633,NHEK@0.119035,NHLF@0.032682,SKNSHRA@0.133295, 0 0 0 0 ENSG00000248445.1 ENST00000508424.1 chr5:115783299-115807369 3 859 23207 exonic 9.73 0 0,0,0 0 0,0,0 114.733410942957 94.6991855905546 646.277 114.74039580908 72.3807040979015 485.527 136.940628637951 71.5196707889861 484.787 0 0 chimp,cow,dog,guinea_pig,horse,human,macaque,marmoset,mouse,orangutan,panda,pig,rabbit,rat, antisense antisense A549@0.204437,AG04450@0.151721,BJ@0.356933,GM12878@1.53803,H1HESC@0.0401365,HELAS3@0.302272,HEPG2@0.50403,HMEC@0.070063,HSMM@0.0210495,HUVEC@0.283195,K562@0.527738,MCF7@0.366633,NHEK@0.119035,NHLF@0.032682,SKNSHRA@0.133295, 0 0 0 0 ENSG00000248445.1 ENST00000510682.1 chr5:115785320-115843972 3 518 58130 exonic -0.22 0 0,0,0 0 0,0,0 0 77.4104765181489 234.08 16.7857142857143 65.2821262687081 160.59 23.4015444015444 68.2702735248581 146.469 0 0 chimp,dog,elephant,guinea_pig,horse,human,macaque,marmoset,orangutan,panda, antisense antisense A549@0.204437,AG04450@0.151721,BJ@0.356933,GM12878@1.53803,H1HESC@0.0401365,HELAS3@0.302272,HEPG2@0.50403,HMEC@0.070063,HSMM@0.0210495,HUVEC@0.283195,K562@0.527738,MCF7@0.366633,NHEK@0.119035,NHLF@0.032682,SKNSHRA@0.133295, 0 0 0 0 ENSG00000248445.1 ENST00000508640.1 chr5:115785324-115831817 2 754 45737 exonic 2.66 0 0,0,0 0 0,0,0 54.0676392572944 72.4955725124079 234.08 52.1352785145889 57.6561645932177 160.59 65.2387267904509 62.0890088987035 146.469 0 0 cat,chimp,dog,guinea_pig,horse,human,macaque,marmoset,orangutan,pig,rat, antisense antisense A549@0.204437,AG04450@0.151721,BJ@0.356933,GM12878@1.53803,H1HESC@0.0401365,HELAS3@0.302272,HEPG2@0.50403,HMEC@0.070063,HSMM@0.0210495,HUVEC@0.283195,K562@0.527738,MCF7@0.366633,NHEK@0.119035,NHLF@0.032682,SKNSHRA@0.133295, 0 0 0 0 ENSG00000248445.1 ENST00000514214.1 chr5:115785426-115834850 2 780 48642 intronic -3.26 0 0,0,0 0 0,0,0 180.585897435897 76.8623206282636 234.08 165.485897435897 62.7508120554253 169.285 118.3 67.8478269807985 156.647 0 0 chimp,cow,dog,elephant,horse,human,macaque,marmoset,mouse,opossum,orangutan,panda,pig,rabbit,rat, antisense antisense A549@0.204437,AG04450@0.151721,BJ@0.356933,GM12878@1.53803,H1HESC@0.0401365,HELAS3@0.302272,HEPG2@0.50403,HMEC@0.070063,HSMM@0.0210495,HUVEC@0.283195,K562@0.527738,MCF7@0.366633,NHEK@0.119035,NHLF@0.032682,SKNSHRA@0.133295, 0 0 0 0 ENSG00000248445.1 ENST00000507558.1 chr5:115806886-115808334 2 434 1012 intronic 0 0 0,0,1 0 0,0,0 31.0806451612903 4.1304347826087 36.816 33.7972350230415 5.6501976284585 23.773 29.3271889400922 16.00395256917 40.315 0 0 cat,chimp,cow,dog,elephant,guinea_pig,horse,human,macaque,marmoset,mouse,orangutan,panda,pig,rat, antisense antisense A549@0.204437,AG04450@0.151721,BJ@0.356933,GM12878@1.53803,H1HESC@0.0401365,HELAS3@0.302272,HEPG2@0.50403,HMEC@0.070063,HSMM@0.0210495,HUVEC@0.283195,K562@0.527738,MCF7@0.366633,NHEK@0.119035,NHLF@0.032682,SKNSHRA@0.133295, 0 0 0 0 ENSG00000249167.1 ENST00000508766.1 chr5:115910178-115927094 2 480 16434 exonic 1.09 0 0,1,0 0 0,0,0 49.875 20.8528051600341 213.479 65.66875 28.5681513934526 251.902 65.19375 31.7317147377388 192.945 0 0 chimp,cow,dog,elephant,horse,human,macaque,marmoset,mouse,orangutan,panda,pig,rabbit,rat, lincRNA lincRNA A549@0.009007,AG04450@0,BJ@0.013428,GM12878@0.226332,H1HESC@0.0841095,HELAS3@0,HEPG2@0.031036,HMEC@0,HSMM@0.129447,HUVEC@0,K562@0,MCF7@0.0464495,NHEK@0.0348767,NHLF@0,SKNSHRA@0.032983, 0 0 0 0 ENSG00000251311.1 ENST00000504419.1 chr5:116078687-116097905 4 703 18509 intergenic 0.91 0 0,0,0 0 0,0,0 37.0213371266003 12.5921983899724 27.032 7.10810810810811 8.25625371440921 4.245 0 11.4277378572586 4.755 0 0 chimp,human,macaque,marmoset,orangutan,pig,rat, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0.0421405,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000249150.1 ENST00000508636.1 chr5:116156689-116165883 3 550 8640 intergenic 1.91 0 0,0,0 0 0,0,0 0 5.89444444444444 0 0 2.84664351851852 4.911 0 3.61423611111111 5.52 0 0 chimp,cow,dog,elephant,human,macaque,marmoset,orangutan,panda, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0.028647,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000250949.1 ENST00000511418.1 chr5:116366896-116374265 2 418 6949 intergenic 0.35 0 0,0,0 0 0,0,0 0 20.2935674197726 0 0 10.9663260900849 0 0 15.6921859260325 0 0 0 chimp,dog,elephant,horse,human,macaque,marmoset,orangutan,pig, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0.0638655,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0.0139153,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000248663.2 ENST00000514186.1 chr5:116751205-116881993 4 560 130222 intergenic 0.50 0 0,0,0 0 0,0,0 0 6.97268510697117 0 0 9.47553408794213 0 0 12.2865875197739 0 0 0 cat,chimp,cow,dog,guinea_pig,horse,human,macaque,marmoset,orangutan,panda,pig, lincRNA lincRNA A549@0.003518,AG04450@0,BJ@0,GM12878@0.0206665,H1HESC@0.162646,HELAS3@0.00745,HEPG2@0.0501515,HMEC@0.238908,HSMM@0,HUVEC@0,K562@0,MCF7@2.39959,NHEK@0.385132,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000248663.2 ENST00000504107.1 chr5:116790959-116815063 3 614 23486 intergenic 1.07 0 0,1,1 0 0,0,0 0 6.96206250532232 0 0 9.15720003406284 0 0 15.100017031423 0 0 0 NA lincRNA lincRNA A549@0.003518,AG04450@0,BJ@0,GM12878@0.0206665,H1HESC@0.162646,HELAS3@0.00745,HEPG2@0.0501515,HMEC@0.238908,HSMM@0,HUVEC@0,K562@0,MCF7@2.39959,NHEK@0.385132,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000249797.1 ENST00000509669.1 chr5:117260703-117542666 4 633 281324 intergenic -5.67 0 0,0,0 0 0,0,0 0 11.2294187484893 0 0 11.070669406094 0 3.07109004739337 13.4936621120132 0 0 0 chimp,cow,elephant,guinea_pig,horse,human,macaque,marmoset,orangutan,rabbit, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0.0024915,NHEK@0,NHLF@0.010974,SKNSHRA@0, 0 0 0 0 ENSG00000249797.1 ENST00000509367.1 chr5:117523162-117601730 2 805 77761 intergenic 1.90 0 0,0,0 0 0,0,0 37.167701863354 11.9608286930466 0 52.7652173913043 10.701559907923 0 61.5316770186335 13.2832525301887 0 0 0 cat,chimp,cow,dog,elephant,guinea_pig,horse,human,macaque,marmoset,mouse,opossum,orangutan,panda,pig,rabbit,rat, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0.0024915,NHEK@0,NHLF@0.010974,SKNSHRA@0, 0 0 0 0 ENSG00000250427.1 ENST00000503877.1 chr5:117618270-117620477 2 1221 984 intergenic -1.36 1 0,0,0 0 0,0,0 0 0 0 0 0 0 0 0 3.402 1 1 chimp,human,macaque,marmoset,orangutan, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0.0066505,NHEK@0,NHLF@0.0063815,SKNSHRA@0, 0 0 0 0 ENSG00000250891.1 ENST00000506769.1 chr5:117803851-117897812 9 2794 91151 intergenic 1.93 0 0,0,0 0 0,0,0 5.159627773801 18.3604897368103 0 6.43700787401575 17.4849645094404 0 7.43056549749463 55.7434696273217 0 0 0 chimp,horse,human,macaque,marmoset,orangutan, lincRNA lincRNA A549@0,AG04450@0,BJ@0.0008635,GM12878@0.0028075,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0.0094705,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000250891.1 ENST00000515704.1 chr5:117881553-117897751 4 714 15478 intergenic 5.19 0 0,0,0 0 0,0,0 0 57.5835379247965 0 0 47.0755911616488 2.151 0 49.0618943015894 2.187 0 0 chimp,dog,horse,human,macaque,marmoset,orangutan,panda,pig, lincRNA lincRNA A549@0,AG04450@0,BJ@0.0008635,GM12878@0.0028075,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0.0094705,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000249551.1 ENST00000513366.1 chr5:117911270-117917019 5 576 5165 intergenic 5.90 0 0,0,0 0 0,0,0 0 28.1095837366893 0 6.08680555555556 19.3076476282672 0 4.93055555555556 20.1539206195547 0 0 0 chimp,horse,human,macaque,marmoset,orangutan, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0.0100855,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000249128.1 ENST00000503320.1 chr5:117931883-117963787 5 538 31358 intergenic 0.06 0 0,0,0 0 0,0,0 0 14.0912047962242 0 4.60966542750929 16.3628101281969 3.78 4.51672862453532 18.5480579118566 3.976 0 0 chimp,cow,dog,elephant,horse,human,macaque,marmoset,orangutan,rabbit, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000249426.1 ENST00000515364.1 chr5:118096169-118121154 2 495 24488 intergenic -1.59 0 0,0,0 0 0,0,0 0 0.692951649787651 0 0 3.45965370793858 2.04 0 4.71283894152238 2.072 0 0 chimp,dog,elephant,guinea_pig,horse,human,macaque,marmoset,orangutan,panda,pig, lincRNA lincRNA A549@0.0142925,AG04450@0,BJ@0,GM12878@0.04595,H1HESC@0.0059795,HELAS3@0.009405,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0.019767,MCF7@0.02041,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000249494.1 ENST00000506486.1 chr5:118342042-118373363 6 806 30505 intergenic 3.49 0 0,0,0 0 0,0,0 0 1.74069824618915 0 0 4.41294869693493 15.094 23.3436724565757 13.1841993115883 12.641 1 1 chimp,human,macaque,marmoset,orangutan, antisense antisense A549@0.026486,AG04450@0.005639,BJ@0.019225,GM12878@0.05093,H1HESC@0.035598,HELAS3@0.013895,HEPG2@0.064266,HMEC@0,HSMM@0,HUVEC@0.073229,K562@0.025367,MCF7@0.0053825,NHEK@0.0117277,NHLF@0.0203745,SKNSHRA@0.0620315, 0 0 0 0 ENSG00000249494.1 ENST00000504820.1 chr5:118347498-118406585 3 522 58561 intergenic 3.49 0 0,1,0 1 0,0,0 0 1.4365704137566 85.652 0 3.82256109014532 117.04 10.5785440613027 17.3666774816004 112.125 0 0 chimp,cow,dog,guinea_pig,horse,human,macaque,marmoset,mouse,opossum,orangutan,rabbit,rat, antisense antisense A549@0.026486,AG04450@0.005639,BJ@0.019225,GM12878@0.05093,H1HESC@0.035598,HELAS3@0.013895,HEPG2@0.064266,HMEC@0,HSMM@0,HUVEC@0.073229,K562@0.025367,MCF7@0.0053825,NHEK@0.0117277,NHLF@0.0203745,SKNSHRA@0.0620315, 0 0 0 0 ENSG00000249494.1 ENST00000510128.1 chr5:118355610-118406556 2 380 50564 intergenic 3.49 0 1,1,1 1 0,0,0 0 1.1487817419508 85.652 1.95789473684211 3.50545842892176 117.04 2.04473684210526 18.7760659757931 112.125 1 1 chimp,human,macaque,marmoset,orangutan, antisense antisense A549@0.026486,AG04450@0.005639,BJ@0.019225,GM12878@0.05093,H1HESC@0.035598,HELAS3@0.013895,HEPG2@0.064266,HMEC@0,HSMM@0,HUVEC@0.073229,K562@0.025367,MCF7@0.0053825,NHEK@0.0117277,NHLF@0.0203745,SKNSHRA@0.0620315, 0 0 0 0 ENSG00000251293.1 ENST00000514240.1 chr5:119581143-119669197 2 431 87621 intergenic 0.55 0 0,0,0 0 0,0,0 0 3.22498031293868 37.962 0 4.94874516383059 14.811 0 5.63820317047283 15.263 0 0 chimp,human,macaque,marmoset,mouse,orangutan,pig,rat, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0.009504,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000248927.1 ENST00000511422.1 chr5:120116913-120126473 2 1112 8446 intergenic -3.96 0 0,1,1 0 0,0,0 25.8830935251799 0 0 91.8812949640288 1.97028179019654 0 107.246402877698 2.89095429789249 0 0 0 cat,chimp,cow,dog,elephant,horse,human,macaque,marmoset,mouse,orangutan,panda,pig,rabbit,rat, lincRNA lincRNA A549@0,AG04450@0.545507,BJ@0.508595,GM12878@0,H1HESC@0.503815,HELAS3@0,HEPG2@0,HMEC@0,HSMM@1.49768,HUVEC@0,K562@0.0044095,MCF7@0.01452,NHEK@0.00355533,NHLF@0.515571,SKNSHRA@0.233409, 0 0 0 0 ENSG00000229855.2 ENST00000433406.2 chr5:120658245-120661532 3 501 2782 intergenic 7.22 0 0,0,0 0 0,0,0 0 0 0 0 0 7.967 0 0 9.922 1 1 chimp,human,macaque,marmoset,orangutan, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0.311928,H1HESC@0,HELAS3@0.0569045,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000247311.2 ENST00000504829.1 chr5:121464457-121490551 2 729 25363 encompassing 2.25 0 0,0,1 0 0,0,0 0 12.5013208216694 41.625 78.9465020576132 25.1066514213618 34.445 77.4581618655693 24.6484248708749 34.668 1 1 chimp,human,macaque,marmoset,orangutan, antisense antisense A549@0,AG04450@0.0139205,BJ@0.0869255,GM12878@0,H1HESC@0.012196,HELAS3@0.018153,HEPG2@0,HMEC@0,HSMM@0.0152885,HUVEC@0,K562@0,MCF7@0,NHEK@0.00560533,NHLF@0.010114,SKNSHRA@0.010717, 0 0 0 0 ENSG00000249610.1 ENST00000505209.1 chr5:121490191-121491710 2 426 1091 intergenic -8.62 0 0,0,1 0 0,0,0 0 38.1530705774519 15.872 130.556338028169 32.9908340971586 14.756 127.93896713615 33.2172318973419 16.286 0 0 cat,chimp,cow,dog,elephant,guinea_pig,horse,human,macaque,marmoset,mouse,orangutan,panda,pig,rabbit,rat, antisense antisense A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0.002561,NHLF@0.0097755,SKNSHRA@0, 0 0 0 0 ENSG00000249621.1 ENST00000512105.1 chr5:121656986-121659053 2 581 1484 intronic 1.29 0 0,0,0 0 0,0,0 30.5438898450947 149.008086253369 44.65 24.9707401032702 140.854447439353 52.3 24.657487091222 129.636118598383 61.402 0 0 cat,chimp,cow,dog,horse,human,macaque,marmoset,orangutan,panda, lincRNA lincRNA A549@0.0115695,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0.0077835, 0 0 0 0 ENSG00000249916.1 ENST00000507143.1 chr5:121705457-121719263 4 559 13241 intronic -1.85 0 0,0,0 0 0,0,0 7.8515205724508 18.9120912317801 0 0 31.75953477834 0 0 33.3652292122951 0 0 0 cat,chimp,cow,elephant,human,macaque,marmoset,orangutan,pig, antisense antisense A549@0,AG04450@0,BJ@0,GM12878@0.007161,H1HESC@0.0227505,HELAS3@0.032107,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0.396618,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000250328.1 ENST00000510972.1 chr5:121772192-121814782 6 1418 41162 exonic 9.45 0 0,0,0 0 0,0,0 66.8716502115656 41.27914095525 194.34 46.2073342736248 37.0616102230212 212.815 29.3088857545839 38.1377969972305 205.097 0 0 chimp,cow,elephant,horse,human,macaque,marmoset,orangutan,panda, antisense antisense A549@0.033611,AG04450@0,BJ@0,GM12878@0,H1HESC@0.0785515,HELAS3@0.009047,HEPG2@0.010011,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0.077702,NHEK@0.009189,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000250328.1 ENST00000509993.1 chr5:121772454-121804762 3 780 31524 exonic -1.73 0 0,1,0 0 0,0,0 80.5538461538462 50.1863024996828 0 73.1846153846154 43.2949498794569 2.584 42.9794871794872 44.3677515543713 2.633 0 0 cat,chimp,cow,dog,elephant,guinea_pig,horse,human,macaque,marmoset,orangutan,panda,rabbit, antisense antisense A549@0.033611,AG04450@0,BJ@0,GM12878@0,H1HESC@0.0785515,HELAS3@0.009047,HEPG2@0.010011,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0.077702,NHEK@0.009189,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000250328.1 ENST00000506053.1 chr5:121772457-121804754 2 650 31645 intronic 0.37 0 0,1,0 0 0,0,0 0 52.0133038394691 0 6.40923076923077 43.746373834729 2.584 6.72153846153846 45.1308263548744 2.633 0 0 cat,chimp,dog,elephant,guinea_pig,horse,human,macaque,marmoset,mouse,orangutan,panda,rabbit, antisense antisense A549@0.033611,AG04450@0,BJ@0,GM12878@0,H1HESC@0.0785515,HELAS3@0.009047,HEPG2@0.010011,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0.077702,NHEK@0.009189,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000250328.1 ENST00000503529.1 chr5:121772949-121814775 2 577 41247 intronic 6.99 0 0,0,0 0 0,0,0 24.7279029462738 43.0959827381385 197.784 9.22530329289428 37.4585788057313 215.93 8.75909878682842 38.7747957427207 208.079 0 1 chimp,human,macaque, antisense antisense A549@0.033611,AG04450@0,BJ@0,GM12878@0,H1HESC@0.0785515,HELAS3@0.009047,HEPG2@0.010011,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0.077702,NHEK@0.009189,NHLF@0,SKNSHRA@0, 165 2 0 0 ENSG00000250328.1 ENST00000505546.1 chr5:121780354-121812785 2 556 31873 exonic -0.07 0 0,0,0 0 0,0,0 61.5827338129496 44.4770809148809 0 60.4136690647482 38.3852790763342 0 76.773381294964 38.9229441847331 0 0 0 human, antisense antisense A549@0.033611,AG04450@0,BJ@0,GM12878@0,H1HESC@0.0785515,HELAS3@0.009047,HEPG2@0.010011,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0.077702,NHEK@0.009189,NHLF@0,SKNSHRA@0, 23 4 0 0 ENSG00000251538.1 ENST00000511194.1 chr5:121964647-122066254 12 1639 99946 intergenic 1.73 0 0,0,0 0 0,0,0 104.61928004881 17.2736277589899 0 80.7065283709579 18.2412202589398 0 82.6937156802929 20.519790686971 0 0 0 chimp,human,macaque,marmoset,pig, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0.0174085,H1HESC@0,HELAS3@0.0069355,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0.002821,NHLF@0,SKNSHRA@0.0116175, 0 0 0 0 ENSG00000251538.1 ENST00000514657.1 chr5:122035085-122040764 3 671 5004 intergenic 1.73 0 0,0,0 0 0,0,0 74.8614008941878 34.5763389288569 0 93.5588673621461 29.5479616306954 0 93.822652757079 32.8697042366107 0 0 0 chimp,dog,elephant,guinea_pig,horse,human,macaque,marmoset,orangutan,panda,pig,rabbit, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0.0174085,H1HESC@0,HELAS3@0.0069355,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0.002821,NHLF@0,SKNSHRA@0.0116175, 0 0 0 0 ENSG00000251538.1 ENST00000508992.1 chr5:122065104-122066380 2 466 808 intergenic -1.41 0 0,1,0 0 0,0,0 0 0 0 0 0 0 2.33476394849785 0 0 0 0 chimp,cow,elephant,guinea_pig,horse,human,macaque,marmoset,orangutan,pig, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0.0174085,H1HESC@0,HELAS3@0.0069355,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0.002821,NHLF@0,SKNSHRA@0.0116175, 0 0 0 0 ENSG00000249996.1 ENST00000506859.1 chr5:122371966-122390362 2 559 17835 exonic 0 0 0,1,0 0 0,0,0 0 14.1236893748248 0 33.1735241502683 14.8916736753574 0 23.8282647584973 14.8855060274741 2.916 0 0 chimp,human,macaque,marmoset,orangutan,panda,pig,rabbit, antisense antisense A549@0.166582,AG04450@0.160826,BJ@0.319364,GM12878@0,H1HESC@0.0723235,HELAS3@0.206628,HEPG2@0.102466,HMEC@0.087586,HSMM@0.062765,HUVEC@0.118613,K562@0.004139,MCF7@0.125107,NHEK@0.262701,NHLF@0.622201,SKNSHRA@0.207711, 0 0 0 0 ENSG00000223652.2 ENST00000442777.2 chr5:122422943-122424990 2 790 1255 exonic 3.21 0 0,1,0 0 0,0,0 27.2860759493671 8.2390438247012 33.728 56.7316455696203 31.7745019920319 158.842 98.3632911392405 34.007171314741 180.518 0 0 cat,chimp,dog,elephant,human,macaque,marmoset,orangutan,rat, antisense antisense A549@0.015391,AG04450@0.435283,BJ@0.0267535,GM12878@0,H1HESC@0.0031245,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@2.26072,NHEK@0,NHLF@1.73862,SKNSHRA@0.0716805, 0 0 0 0 ENSG00000223652.2 ENST00000458103.2 chr5:122423329-122425994 2 532 2131 exonic -1.54 0 0,1,0 0 0,0,0 12.781954887218 27.4763022055373 46.683 203.778195488722 63.9455654622243 154.418 276.306390977444 73.0004692632567 145.115 0 0 cat,chimp,cow,dog,elephant,human,macaque,mouse,opossum,orangutan,pig,rat, antisense antisense A549@0.015391,AG04450@0.435283,BJ@0.0267535,GM12878@0,H1HESC@0.0031245,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@2.26072,NHEK@0,NHLF@1.73862,SKNSHRA@0.0716805, 0 0 0 0 ENSG00000253807.1 ENST00000520192.1 chr5:123641923-123721948 4 258 79761 intergenic 1.12 0 0,0,1 0 0,0,0 0 29.3828437456903 0 0 31.7924298842793 0 0 31.6867265957047 0 0 1 chimp,human,macaque,orangutan, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000253807.1 ENST00000519703.1 chr5:123649342-123740772 4 281 91143 intergenic 1.12 0 0,0,0 0 0,0,0 0 24.8850707130553 0 0 23.7758577180914 0 0 24.8984562720121 0 0 0 chimp,cow,guinea_pig,horse,human,macaque,marmoset,orangutan,pig, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000251421.1 ENST00000510004.1 chr5:123731296-123736088 2 673 4117 intergenic -5.68 0 0,0,0 0 0,0,0 102.894502228826 94.4240952149623 138.496 1.91233283803863 55.3862035462716 75.235 4.7592867756315 54.8484333252368 86.756 0 0 cat,chimp,cow,elephant,guinea_pig,horse,human,macaque,marmoset,orangutan,pig,rabbit,rat, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0.003361, 0 0 0 0 ENSG00000251662.2 ENST00000510853.2 chr5:123731640-123736348 2 589 4117 intergenic -2.87 0 0,0,0 0 0,0,0 0 94.4240952149623 208.285 0 55.3862035462716 57.572 0 54.8484333252368 69.511 0 0 chimp,cow,horse,human,macaque,marmoset,mouse,orangutan,rat, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000248600.1 ENST00000502809.1 chr5:123791066-123795791 3 605 4116 intergenic 1.60 0 0,0,0 0 0,0,0 9.19834710743802 123.809037900875 0 6.54545454545454 136.2351797862 0 18.8231404958678 135.577259475219 0 0 0 chimp,cow,horse,human,macaque,marmoset,mouse,orangutan,rat, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000251214.1 ENST00000513422.1 chr5:123795605-123796242 1 637 0 intergenic -7.52 0 0,0,0 0 0,0,0 142.156985871272 0 371.316 214.167974882261 0 248.985 204.390894819466 0 222.089 0 0 cat,chimp,cow,dog,elephant,guinea_pig,horse,human,macaque,marmoset,orangutan,panda,pig,rabbit, lincRNA lincRNA A549@0.009731,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0.0084315, 0 0 0 0 ENSG00000250438.1 ENST00000510570.1 chr5:123805284-123805594 1 310 0 intergenic 0 0 0,0,0 0 0,0,0 0 0 213.49 0 0 178.874 0 0 176.181 0 0 cat,chimp,cow,dog,elephant,guinea_pig,horse,human,macaque,marmoset,orangutan,panda,pig,rabbit, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000248296.1 ENST00000503145.1 chr5:123828468-123872041 3 794 42775 intergenic 0.21 0 0,0,0 0 0,0,0 0 51.055219170076 86.005 0 48.2858912916423 160.423 0 50.0136762127411 180.924 0 0 cat,chimp,horse,human,macaque,marmoset,orangutan, lincRNA lincRNA A549@0,AG04450@0,BJ@0.0179565,GM12878@0,H1HESC@0.007303,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0.002421,SKNSHRA@0.006978, 0 0 0 0 ENSG00000250005.1 ENST00000503061.1 chr5:124052884-124053638 1 754 0 intronic -4.91 0 0,0,1 0 0,0,0 0 0 0 0 0 7.83 2.57824933687003 0 8.381 0 0 cat,chimp,human,macaque,marmoset,orangutan, antisense antisense A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000250647.1 ENST00000508427.1 chr5:124056705-124057375 1 670 0 intronic -5.54 0 0,0,0 0 0,0,0 0 0 61.149 26.3671641791045 0 14.148 27.1432835820896 0 16.123 0 0 cat,chimp,cow,dog,human,macaque,marmoset,orangutan,panda, sense_intronic sense_intronic A549@0.007559,AG04450@0.076577,BJ@0.0096725,GM12878@0.166593,H1HESC@0.457008,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0.001988,HUVEC@1.18091,K562@0.0093435,MCF7@0.002796,NHEK@0.003524,NHLF@0,SKNSHRA@0.145466, 0 0 0 0 ENSG00000250843.1 ENST00000515214.1 chr5:124056778-124057382 1 604 0 intronic 2.03 0 0,0,0 0 0,0,0 0 0 0 8.44370860927152 0 29.479 8.55629139072848 0 31.38 0 0 cat,chimp,cow,dog,elephant,human,macaque,marmoset,orangutan,panda, antisense antisense A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000250206.1 ENST00000512050.1 chr5:124064524-124065086 1 562 0 intronic 6.98 0 0,1,0 0 0,0,0 30.1814946619217 0 0 0 0 0 3.03202846975089 0 0 0 0 chimp,cow,guinea_pig,horse,human,macaque,marmoset,orangutan,pig,rat, antisense antisense A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000250530.1 ENST00000502467.1 chr5:124065403-124065848 1 445 0 intronic 0.42 0 0,0,0 0 0,0,0 326.986516853933 0 46.368 401.595505617978 0 12.399 341.651685393258 0 10.518 0 0 cat,chimp,cow,dog,elephant,guinea_pig,horse,human,macaque,marmoset,mouse,orangutan,panda,pig,platypus,rabbit,rat, antisense antisense A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000251274.1 ENST00000515136.1 chr5:124068940-124069465 1 525 0 intronic -4.71 0 0,0,0 0 0,0,0 472.318095238095 0 56.723 414.190476190476 0 48.856 339.718095238095 0 67.551 0 0 chimp,cow,dog,elephant,horse,human,macaque,marmoset,mouse,orangutan,panda,pig,rabbit, antisense antisense A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000251456.1 ENST00000507630.1 chr5:124070311-124070868 1 557 0 intronic -9.67 0 0,0,1 0 0,0,0 297.563734290844 0 202.629 170.152603231598 0 149.081 159.258527827648 0 226.479 0 0 cat,chimp,cow,dog,elephant,guinea_pig,horse,human,macaque,marmoset,orangutan,panda,pig,platypus, sense_intronic sense_intronic A549@0.0111205,AG04450@0.022294,BJ@0,GM12878@0.044348,H1HESC@0.093023,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0.0023905,HUVEC@0.0936135,K562@0.002564,MCF7@0,NHEK@0.016971,NHLF@0.0042665,SKNSHRA@0.088534, 0 0 0 0 ENSG00000249643.1 ENST00000505538.1 chr5:124073092-124073698 1 606 0 intronic -3.57 0 0,0,0 0 0,0,0 83.5808580858086 0 409.434 58.9620462046205 0 385.472 64.5726072607261 0 403.299 0 0 cat,chimp,cow,dog,elephant,guinea_pig,horse,human,marmoset,mouse,orangutan,pig,rabbit,rat, antisense antisense A549@0,AG04450@0.0036925,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000248443.1 ENST00000511091.1 chr5:124165165-124165983 1 818 0 intergenic -4.06 0 0,0,0 0 0,0,0 0 0 0 0 0 0 0 0 0 0 0 chimp,cow,horse,human,macaque,marmoset,orangutan,rabbit, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0.0064845,H1HESC@0,HELAS3@0.010193,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0.144723,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000249261.1 ENST00000510242.1 chr5:124204665-124205607 1 942 0 intergenic -4.89 0 0,1,0 0 0,0,0 0 0 0 15.0498938428875 0 1.61 15.7409766454352 0 3.111 0 0 cat,chimp,cow,dog,guinea_pig,horse,human,macaque,marmoset,mouse,orangutan,rat, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000249423.1 ENST00000509456.1 chr5:124255640-124257291 2 202 1447 intergenic 0 0 0,0,1 0 0,0,0 536.262376237624 226.351071181755 55.354 363.415841584158 220.750518313753 20.535 299.306930693069 240.966827919834 29.639 0 0 cat,chimp,cow,dog,elephant,guinea_pig,horse,human,macaque,marmoset,mouse,orangutan,panda,pig,rabbit,rat, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0.0143355,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0.212375,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000250411.1 ENST00000513915.1 chr5:124372524-124377932 2 116 5290 intergenic -3.29 0 0,0,0 0 0,0,0 0 0 0 0 0 0 0 0 0 1 1 chimp,human,macaque,marmoset,orangutan, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000249365.1 ENST00000512965.1 chr5:124443897-124485622 2 449 41274 intergenic 2.42 0 0,0,0 0 0,0,0 505.492204899777 20.9820952657848 117.425 249.772828507795 21.5429083684644 66.884 290.389755011136 24.5798565682996 89.676 0 0 cat,chimp,cow,dog,elephant,guinea_pig,horse,human,macaque,marmoset,mouse,orangutan,panda,pig,platypus,rabbit,rat, lincRNA lincRNA A549@0.0192515,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0.072594,MCF7@0,NHEK@0.005661,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000248631.1 ENST00000514619.1 chr5:124537581-124538223 1 642 0 intergenic 0 0 0,0,0 0 0,0,0 0 0 78.582 0 0 136.845 1.83021806853583 0 122.483 0 0 chimp,dog,horse,human,macaque,marmoset,orangutan,panda, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0.009052,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0.029222,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000249932.1 ENST00000507341.1 chr5:124704261-124704842 1 581 0 intergenic -6.62 0 0,0,0 0 0,0,0 0 0 6.16 0 0 0 4.32013769363167 0 0 0 0 chimp,dog,elephant,human,macaque,marmoset,orangutan,panda,rabbit, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000248147.1 ENST00000511994.1 chr5:124704456-124705035 1 579 0 intergenic -10.81 0 0,0,0 0 0,0,0 85.7098445595855 0 29.561 170.730569948187 0 82.088 177.19689119171 0 99.01 0 0 cat,chimp,cow,dog,elephant,guinea_pig,horse,human,macaque,marmoset,mouse,orangutan,panda,rabbit,rat, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000249677.1 ENST00000502275.1 chr5:124705858-124706617 1 759 0 intergenic -5.51 0 0,0,0 0 0,0,0 0 0 0 0 0 8.796 1.54808959156785 0 11.22 0 0 cat,chimp,cow,dog,elephant,guinea_pig,horse,human,macaque,marmoset,orangutan,panda,rabbit, lincRNA lincRNA A549@0.005712,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0.0143955, 0 0 0 0 ENSG00000250402.1 ENST00000511631.1 chr5:124712527-124713132 1 605 0 intergenic 2.60 0 0,1,0 0 0,0,0 0 0 50.575 0 0 86.855 0 0 88.851 0 0 cat,chimp,cow,dog,elephant,horse,human,macaque,marmoset,orangutan,panda, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0.003744, 0 0 0 0 ENSG00000250269.1 ENST00000511583.1 chr5:124718552-124719148 1 596 0 intergenic -1.81 0 0,0,0 0 0,0,0 0 0 0 0 0 0 0 0 0 0 0 NA lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0.0034465,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0.007614, 0 0 0 0 ENSG00000251554.1 ENST00000509010.1 chr5:124731072-124731673 1 601 0 intergenic -10.91 0 0,0,0 0 0,0,0 0 0 0 0 0 0 0 0 0 1 1 chimp,human,macaque,marmoset,orangutan, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0.008817,HEPG2@0.0070785,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0.007551, 2 44 0 0 ENSG00000248752.1 ENST00000450613.2 chr5:125412493-125615493 3 544 202452 intergenic 4.35 0 0,0,1 0 0,0,0 0 10.6346047458163 8.28 0 14.7103115800289 0 0 16.9269011913935 3.207 0 0 chimp,cow,dog,elephant,guinea_pig,horse,human,macaque,marmoset,orangutan,pig, lincRNA lincRNA A549@0,AG04450@0,BJ@0.011832,GM12878@0.014378,H1HESC@0,HELAS3@0,HEPG2@0.0299205,HMEC@0,HSMM@0.0037615,HUVEC@0,K562@0.004983,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0.0101675, 0 0 0 0 ENSG00000248107.1 ENST00000507428.1 chr5:125515270-125529543 4 562 13705 intergenic 1.21 0 0,0,0 0 0,0,0 22.0996441281139 7.40634804815761 81.378 13.1637010676157 9.73133892739876 49.593 19.0836298932384 12.8639912440715 50.672 0 0 chimp,dog,horse,human,macaque,marmoset, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000250602.1 ENST00000515808.1 chr5:125769197-125826044 3 744 56099 intronic 4.03 0 0,1,0 0 0,0,0 0 11.0172552095403 0 17.5 11.1277384623612 0 20.3172043010753 11.8786609386977 0 0 0 cat,chimp,cow,dog,elephant,guinea_pig,horse,human,macaque,marmoset,orangutan,panda,rabbit, antisense antisense A549@0,AG04450@0,BJ@0.003315,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0.061681,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000250602.1 ENST00000512779.1 chr5:125794479-125803323 2 475 8367 intronic 4.03 0 0,0,0 0 0,0,0 0 5.52623401458109 0 0 10.9500418310027 0 0 13.0493605832437 0 0 0 cat,chimp,cow,horse,human,marmoset,orangutan, antisense antisense A549@0,AG04450@0,BJ@0.003315,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0.061681,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000250602.1 ENST00000512500.1 chr5:125816103-125826063 3 727 9229 exonic 0.82 0 0,0,1 0 0,0,0 137.143053645117 218.839744284321 0 167.792297111417 16.5819698775599 0 157.422283356259 17.9141835518474 0 0 0 chimp,cow,dog,elephant,guinea_pig,horse,human,macaque,marmoset,orangutan,panda,pig,rabbit, antisense antisense A549@0,AG04450@0,BJ@0.003315,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0.061681,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000251072.1 ENST00000509185.1 chr5:126091229-126112178 3 452 20493 intergenic -1.21 0 0,0,0 0 0,0,0 49.5575221238938 1.61416093300151 40.8 20.2920353982301 4.26599326599327 61.107 20.6504424778761 4.81071585419411 77.653 0 0 chimp,cow,dog,horse,human,macaque,marmoset,orangutan, antisense antisense A549@0,AG04450@0,BJ@0,GM12878@0.0724745,H1HESC@0.013063,HELAS3@0.0174985,HEPG2@0.0093655,HMEC@0,HSMM@0,HUVEC@0,K562@0.0436725,MCF7@0.0133565,NHEK@0,NHLF@0.0085765,SKNSHRA@0.051637, 0 0 0 0 ENSG00000248799.1 ENST00000512352.1 chr5:126987385-126999721 4 543 11787 intronic 3.07 0 0,0,0 0 0,0,0 0 15.5323661661152 5.28 0 20.1634851955544 4.518 0 22.7271570374141 4.644 0 0 chimp,horse,human,macaque,marmoset, antisense antisense A549@0,AG04450@0,BJ@0.004424,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000230561.3 ENST00000514853.2 chr5:127039082-127277326 7 1037 237195 intergenic 14.75 0 0,0,0 0 0,1,0 39.7097396335583 4.2712578258395 33.602 170.389585342334 10.681405594553 34.059 179.871745419479 18.1644005986635 25.114 0 0 cat,chimp,cow,dog,elephant,guinea_pig,horse,human,macaque,marmoset,mouse,opossum,orangutan,panda,pig,rabbit,rat, lincRNA lincRNA A549@0.004166,AG04450@0,BJ@0.0051395,GM12878@0,H1HESC@0.094512,HELAS3@0,HEPG2@0.005645,HMEC@0,HSMM@0,HUVEC@0,K562@0.036964,MCF7@0.0349695,NHEK@0.00126467,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000230561.3 ENST00000506670.1 chr5:127075230-127075979 2 517 230 intergenic 1.91 0 0,1,0 0 0,0,0 0 0 0 0 0 0 0 0 0 0 1 chimp,human,orangutan, lincRNA lincRNA A549@0.004166,AG04450@0,BJ@0.0051395,GM12878@0,H1HESC@0.094512,HELAS3@0,HEPG2@0.005645,HMEC@0,HSMM@0,HUVEC@0,K562@0.036964,MCF7@0.0349695,NHEK@0.00126467,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000250603.1 ENST00000507509.1 chr5:127174178-127193496 2 386 18930 intergenic 0 0 0,0,0 0 0,0,0 0 6.70760697305864 0 0 10.9315372424723 0 0 11.6460116217644 2.585 0 0 chimp,horse,human,marmoset,orangutan, lincRNA lincRNA A549@0,AG04450@0,BJ@0.0063455,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0.0058475, 0 0 0 0 ENSG00000230561.3 ENST00000513708.1 chr5:127270935-127277199 2 661 5601 intergenic 1.88 0 0,1,1 0 0,1,0 12.9803328290469 6.92858418139618 0 69.464447806354 3.27959292983396 22.672 68.6293494704992 4.36118550258882 28.604 0 0 chimp,cow,dog,elephant,guinea_pig,horse,human,marmoset,opossum,orangutan,panda, lincRNA lincRNA A549@0.004166,AG04450@0,BJ@0.0051395,GM12878@0,H1HESC@0.094512,HELAS3@0,HEPG2@0.005645,HMEC@0,HSMM@0,HUVEC@0,K562@0.036964,MCF7@0.0349695,NHEK@0.00126467,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000245937.2 ENST00000499346.2 chr5:127276118-127418792 4 1376 141292 intergenic 1.02 0 1,1,1 1 0,0,0 28.202761627907 9.02392209042267 0 19.2645348837209 11.8658947428021 147.725 23.3779069767442 13.2539634232653 67.48 0 0 chimp,dog,guinea_pig,horse,human,macaque,marmoset,mouse,orangutan,rat, lincRNA processed_transcript A549@7.76143,AG04450@3.86928,BJ@4.24666,GM12878@5.01202,H1HESC@1.15039,HELAS3@1.36086,HEPG2@1.2148,HMEC@4.4786,HSMM@3.79103,HUVEC@2.24484,K562@3.28666,MCF7@4.08049,NHEK@4.16741,NHLF@4.46875,SKNSHRA@4.19612, 0 0 0 0 ENSG00000245937.2 ENST00000514409.1 chr5:127276697-127418720 4 490 141527 intergenic -0.73 0 1,1,1 1 0,0,0 53.4979591836735 9.00893822380182 0 28.2265306122449 11.8666120245607 120.591 136.116326530612 13.2523758717418 69.921 0 0 cat,chimp,cow,dog,guinea_pig,horse,human,macaque,marmoset,orangutan,pig, lincRNA processed_transcript A549@7.76143,AG04450@3.86928,BJ@4.24666,GM12878@5.01202,H1HESC@1.15039,HELAS3@1.36086,HEPG2@1.2148,HMEC@4.4786,HSMM@3.79103,HUVEC@2.24484,K562@3.28666,MCF7@4.08049,NHEK@4.16741,NHLF@4.46875,SKNSHRA@4.19612, 0 0 0 0 ENSG00000245937.2 ENST00000501652.1 chr5:127301580-127418666 4 1597 115483 intergenic -3.26 0 1,1,1 1 0,0,0 0 7.7198115739979 0 1.80964308077646 10.374124329988 94.239 1.80964308077646 11.8315076677953 61.137 1 1 chimp,human,macaque,marmoset,orangutan, lincRNA processed_transcript A549@7.76143,AG04450@3.86928,BJ@4.24666,GM12878@5.01202,H1HESC@1.15039,HELAS3@1.36086,HEPG2@1.2148,HMEC@4.4786,HSMM@3.79103,HUVEC@2.24484,K562@3.28666,MCF7@4.08049,NHEK@4.16741,NHLF@4.46875,SKNSHRA@4.19612, 0 0 0 0 ENSG00000245937.2 ENST00000501173.2 chr5:127302241-127418767 4 945 115575 intergenic -5.00 0 1,1,1 1 0,0,0 0 7.71366645035691 0 6.13439153439153 10.3658663205711 140.297 7.63915343915344 11.8220895522388 65.259 0 0 chimp,cow,human,macaque,marmoset,orangutan, lincRNA processed_transcript A549@7.76143,AG04450@3.86928,BJ@4.24666,GM12878@5.01202,H1HESC@1.15039,HELAS3@1.36086,HEPG2@1.2148,HMEC@4.4786,HSMM@3.79103,HUVEC@2.24484,K562@3.28666,MCF7@4.08049,NHEK@4.16741,NHLF@4.46875,SKNSHRA@4.19612, 0 0 0 0 ENSG00000245937.2 ENST00000514573.1 chr5:127302365-127418782 4 605 115806 intergenic -5.00 0 1,1,1 1 0,0,0 0 7.69827988187141 0 6.9404958677686 10.370144897501 146.648 9.35702479338843 11.8234633784087 66.892 1 1 chimp,human,macaque,marmoset,orangutan, lincRNA processed_transcript A549@7.76143,AG04450@3.86928,BJ@4.24666,GM12878@5.01202,H1HESC@1.15039,HELAS3@1.36086,HEPG2@1.2148,HMEC@4.4786,HSMM@3.79103,HUVEC@2.24484,K562@3.28666,MCF7@4.08049,NHEK@4.16741,NHLF@4.46875,SKNSHRA@4.19612, 0 0 0 0 ENSG00000245937.2 ENST00000508353.1 chr5:127302427-127418573 3 485 115657 intergenic -14.36 0 0,1,1 1 0,0,0 0 7.7081975150661 0 5.95876288659794 10.3585169942157 71.333 5.95876288659794 11.8137077738485 57.138 0 0 chimp,elephant,human,macaque,marmoset,pig, lincRNA processed_transcript A549@7.76143,AG04450@3.86928,BJ@4.24666,GM12878@5.01202,H1HESC@1.15039,HELAS3@1.36086,HEPG2@1.2148,HMEC@4.4786,HSMM@3.79103,HUVEC@2.24484,K562@3.28666,MCF7@4.08049,NHEK@4.16741,NHLF@4.46875,SKNSHRA@4.19612, 0 0 0 0 ENSG00000245937.2 ENST00000512185.1 chr5:127338387-127339680 2 471 820 intergenic -3.77 0 0,0,0 0 0,0,0 38.0700636942675 75.7719512195122 0 0 2.48780487804878 3.679 0 5.25243902439024 3.835 0 0 chimp,cow,dog,elephant,guinea_pig,horse,human,macaque,marmoset,orangutan,panda,pig,rabbit, lincRNA processed_transcript A549@7.76143,AG04450@3.86928,BJ@4.24666,GM12878@5.01202,H1HESC@1.15039,HELAS3@1.36086,HEPG2@1.2148,HMEC@4.4786,HSMM@3.79103,HUVEC@2.24484,K562@3.28666,MCF7@4.08049,NHEK@4.16741,NHLF@4.46875,SKNSHRA@4.19612, 0 0 0 0 ENSG00000245937.2 ENST00000501702.2 chr5:127357220-127418766 3 2974 58568 intergenic 4.37 0 1,1,1 1 0,0,0 5.18157363819771 5.90800437098757 0 12.2128446536651 8.42063925693211 140.132 17.7192333557498 10.2023289168146 65.592 0 0 cat,chimp,guinea_pig,horse,human,macaque,marmoset,orangutan,panda,pig, lincRNA processed_transcript A549@7.76143,AG04450@3.86928,BJ@4.24666,GM12878@5.01202,H1HESC@1.15039,HELAS3@1.36086,HEPG2@1.2148,HMEC@4.4786,HSMM@3.79103,HUVEC@2.24484,K562@3.28666,MCF7@4.08049,NHEK@4.16741,NHLF@4.46875,SKNSHRA@4.19612, 0 0 0 0 ENSG00000245937.2 ENST00000508878.1 chr5:127359719-127418652 5 963 57962 intergenic 2.30 0 1,1,1 1 0,0,0 16.0020768431983 5.96977329974811 0 36.048805815161 8.45881784617508 87.407 49.7881619937695 10.2591352955385 57.843 0 0 chimp,guinea_pig,human,macaque,marmoset,mouse,orangutan,rat, lincRNA processed_transcript A549@7.76143,AG04450@3.86928,BJ@4.24666,GM12878@5.01202,H1HESC@1.15039,HELAS3@1.36086,HEPG2@1.2148,HMEC@4.4786,HSMM@3.79103,HUVEC@2.24484,K562@3.28666,MCF7@4.08049,NHEK@4.16741,NHLF@4.46875,SKNSHRA@4.19612, 0 0 0 0 ENSG00000248634.1 ENST00000514867.1 chr5:127999671-128078522 2 460 78389 intronic 0.71 0 0,0,0 0 0,0,0 0 16.9790914541581 100.096 0 23.3386699664494 49.756 0 24.8677620584521 54.815 1 1 chimp,human,macaque,marmoset,orangutan, sense_intronic sense_intronic A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0.0007295,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 1 96 0 0 ENSG00000249421.1 ENST00000502827.1 chr5:128795252-128796382 2 784 344 exonic 2.22 0 0,1,0 0 0,0,0 39.9885204081633 0 55.52 273.771683673469 218.148255813953 140.877 279.047193877551 184.06976744186 158.866 0 0 chimp,cow,elephant,human,macaque,marmoset,mouse,orangutan,pig,rat, antisense antisense A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@2.57245,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@6.01598,NHEK@0.0276777,NHLF@0.0198595,SKNSHRA@0, 0 0 0 0 ENSG00000251680.1 ENST00000503616.1 chr5:128836054-129241610 5 626 404922 exonic 0.57 0 0,1,1 0 0,0,0 76.9888178913738 12.4214219034777 8.928 111 15.7478798385862 15.142 119.482428115016 17.7405179269094 16.984 0 0 cat,chimp,cow,dog,elephant,guinea_pig,horse,human,macaque,marmoset,mouse,orangutan,panda,pig,rabbit,rat, antisense antisense A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0.0032875,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0.010486,HUVEC@0.0047165,K562@0,MCF7@0,NHEK@0.0146153,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000186367.4 ENST00000510883.1 chr5:129083966-129096225 2 236 12021 intergenic 0 0 0,0,0 0 0,1,0 158.851694915254 21.3928125779885 45.124 209.427966101695 21.7642459030031 73.116 255.406779661017 21.1693702686965 72.025 0 0 cat,chimp,cow,dog,elephant,guinea_pig,horse,human,macaque,marmoset,mouse,orangutan,panda,pig,rabbit,rat, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0.0315885,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000186367.4 ENST00000334562.1 chr5:129096155-129100756 2 322 4277 intergenic 0 0 0,0,1 0 0,1,0 210.649068322981 10.7467851297639 0 332.090062111801 16.9160626607435 9.993 354.077639751553 16.9155950432546 11.661 0 0 cat,chimp,cow,dog,guinea_pig,horse,human,marmoset,mouse,orangutan,panda,pig,rabbit,rat, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0.0315885,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000251680.1 ENST00000515569.1 chr5:129098186-129241354 4 458 142704 exonic -0.74 0 0,0,0 0 0,0,0 61.8340611353712 7.88036074672049 0 87.5655021834061 10.3042451508017 19.886 97.9257641921397 11.5959608700527 23.892 0 0 cat,chimp,cow,dog,elephant,guinea_pig,horse,human,macaque,marmoset,mouse,orangutan,panda,pig,rabbit,rat, antisense antisense A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0.0032875,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0.010486,HUVEC@0.0047165,K562@0,MCF7@0,NHEK@0.0146153,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000234758.1 ENST00000446275.1 chr5:131280101-131303913 3 559 23249 exonic 1.19 1 0,1,0 0 0,0,0 41.1037567084079 33.1822013850058 4.37 50.3148479427549 40.4709449868812 0 61.6100178890877 42.9869671813842 0 0 0 cat,chimp,cow,dog,elephant,horse,human,macaque,marmoset,orangutan,panda,pig,rabbit, antisense antisense A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000223548.1 ENST00000424244.1 chr5:131339285-131342715 2 921 2507 intronic 0.95 0 0,1,0 0 0,0,0 29.3452768729642 0 45.162 36.1845819761129 0.571998404467491 50.413 31.7589576547231 1.35700039888313 64.594 0 0 chimp,horse,human,macaque,orangutan, antisense antisense A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0.005362,HELAS3@0.149236,HEPG2@0.244926,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000231585.1 ENST00000432558.1 chr5:131347141-131348892 3 456 1291 exonic 3.33 0 0,1,0 0 0,0,0 18.8157894736842 3.74903175832688 16.8 64.875 42.9620449264136 4.746 60.0921052631579 44.3671572424477 3.04 0 0 cat,chimp,cow,dog,elephant,guinea_pig,horse,human,macaque,marmoset,orangutan,panda, antisense antisense A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000224015.1 ENST00000457890.1 chr5:131514927-131516821 2 379 1513 intergenic 0 0 0,1,0 1 0,0,0 0 0 0 0 4.23529411764706 0 0 4.22339722405816 1.215 0 0 chimp,human,macaque,marmoset,orangutan, lincRNA lincRNA A549@0,AG04450@0,BJ@0.0063515,GM12878@0,H1HESC@0.132439,HELAS3@0.032867,HEPG2@0.0281975,HMEC@0,HSMM@0.0329855,HUVEC@0.007009,K562@1.39399,MCF7@0.008057,NHEK@0.039773,NHLF@0,SKNSHRA@0.054527, 0 0 0 0 ENSG00000237714.1 ENST00000417667.1 chr5:131520569-131528501 3 836 7092 exonic -2.35 0 0,0,1 0 0,0,0 87.5095693779904 0 0 105.181818181818 5.38324873096447 0 94.9665071770335 7.37464749012972 0 0 0 cat,chimp,cow,dog,elephant,horse,human,macaque,marmoset,orangutan,panda,rat, antisense antisense A549@0.002587,AG04450@0.005614,BJ@0.007714,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0.00488,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000233006.1 ENST00000417795.1 chr5:131646978-131705608 8 1784 56832 exonic 5.56 1 1,1,1 1 0,0,0 33.4770179372197 8.39101210585586 202.212 47.5196188340807 11.251513231982 194.596 44.8828475336323 89.954761402027 193.175 0 0 chimp,cow,human,macaque,marmoset,orangutan, antisense antisense A549@4.55278,AG04450@0.199543,BJ@0.364633,GM12878@0.194962,H1HESC@0.594575,HELAS3@7.84116,HEPG2@2.57261,HMEC@0.401113,HSMM@0.797853,HUVEC@0.127867,K562@2.53423,MCF7@0.78837,NHEK@3.80333,NHLF@0.0428825,SKNSHRA@2.70945, 0 0 0 0 ENSG00000233006.1 ENST00000437091.1 chr5:131667882-131695828 5 601 27337 exonic -8.79 0 0,1,0 0 0,0,0 89.8552412645591 5.46779090609796 0 68.5524126455907 8.37242565021765 0 61.9983361064892 171.738815524747 0 0 0 chimp,human,macaque,marmoset,pig, antisense antisense A549@4.55278,AG04450@0.199543,BJ@0.364633,GM12878@0.194962,H1HESC@0.594575,HELAS3@7.84116,HEPG2@2.57261,HMEC@0.401113,HSMM@0.797853,HUVEC@0.127867,K562@2.53423,MCF7@0.78837,NHEK@3.80333,NHLF@0.0428825,SKNSHRA@2.70945, 0 0 0 0 ENSG00000233006.1 ENST00000453876.1 chr5:131685126-131688243 2 585 2530 intergenic -0.12 0 0,0,0 0 0,0,0 0 0 0 0 0 0 0 2.30513833992095 0 0 0 NA antisense retained_intron A549@4.55278,AG04450@0.199543,BJ@0.364633,GM12878@0.194962,H1HESC@0.594575,HELAS3@7.84116,HEPG2@2.57261,HMEC@0.401113,HSMM@0.797853,HUVEC@0.127867,K562@2.53423,MCF7@0.78837,NHEK@3.80333,NHLF@0.0428825,SKNSHRA@2.70945, 128 2 0 0 ENSG00000233006.1 ENST00000457998.1 chr5:131699914-131705340 3 1776 3646 intergenic 1.73 0 0,1,0 1 0,0,0 0 17.8099286889742 202.212 1.86655405405405 6.34777838727372 203.18 3.6356981981982 5.32803071859572 200.6 0 0 chimp,horse,human,macaque,marmoset,orangutan, antisense antisense A549@4.55278,AG04450@0.199543,BJ@0.364633,GM12878@0.194962,H1HESC@0.594575,HELAS3@7.84116,HEPG2@2.57261,HMEC@0.401113,HSMM@0.797853,HUVEC@0.127867,K562@2.53423,MCF7@0.78837,NHEK@3.80333,NHLF@0.0428825,SKNSHRA@2.70945, 0 0 0 0 ENSG00000238160.1 ENST00000454380.1 chr5:131755108-131762406 2 765 6531 intronic 2.72 0 0,1,0 0 0,0,0 0 9.36809064461798 25.175 2.59346405228758 12.1289235951615 139.849 11.4052287581699 11.8680140866636 142.788 0 0 cat,chimp,dog,elephant,human,macaque,orangutan,panda, antisense antisense A549@0.006431,AG04450@0.0316285,BJ@0.072231,GM12878@0.425851,H1HESC@0,HELAS3@0.002946,HEPG2@0.0533695,HMEC@0,HSMM@0.005944,HUVEC@0,K562@0.0163365,MCF7@0,NHEK@0.00962067,NHLF@0.055291,SKNSHRA@0.0427935, 0 0 0 0 ENSG00000238160.1 ENST00000422204.1 chr5:131761073-131762146 2 403 668 intronic 1.77 0 0,0,1 0 0,0,0 0 24.2380239520958 0 0 15.2275449101796 50.183 15.8660049627792 16.2709580838323 57.217 0 0 cat,chimp,cow,dog,horse,human,macaque,orangutan,panda,pig, antisense antisense A549@0.006431,AG04450@0.0316285,BJ@0.072231,GM12878@0.425851,H1HESC@0,HELAS3@0.002946,HEPG2@0.0533695,HMEC@0,HSMM@0.005944,HUVEC@0,K562@0.0163365,MCF7@0,NHEK@0.00962067,NHLF@0.055291,SKNSHRA@0.0427935, 0 0 0 0 ENSG00000234290.1 ENST00000443093.1 chr5:131804579-131808735 2 3731 423 exonic 1.86 0 0,1,0 0 0,0,0 0 0 6.692 6.0093808630394 0 4.082 7.21924417046368 0 5.822 0 0 chimp,human,macaque,orangutan, antisense antisense A549@0.111076,AG04450@0.0353255,BJ@0.0294575,GM12878@0.086297,H1HESC@0.041197,HELAS3@0.148728,HEPG2@0.126896,HMEC@0.006581,HSMM@0.115935,HUVEC@0.0333165,K562@0.0378995,MCF7@0.110423,NHEK@0.0360453,NHLF@0.0202165,SKNSHRA@0.150966, 0 0 0 0 ENSG00000223442.1 ENST00000457489.1 chr5:131966281-131977465 3 436 10744 exonic -1.67 1 0,1,1 0 0,0,0 48.7293577981651 33.6874534623976 100.74 108.926605504587 38.3691362620998 108.498 102.740825688073 39.6382166790767 106.593 0 0 chimp,human,macaque,marmoset,mouse,orangutan,panda, antisense antisense A549@0,AG04450@0,BJ@0,GM12878@0.103394,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0.0059535,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0.0109655, 0 0 0 0 ENSG00000223442.1 ENST00000458509.1 chr5:131973740-131991846 3 404 17698 exonic 1.98 0 0,1,0 0 0,0,0 223.633663366337 20.3407164651373 0 371.405940594059 15.9493163069273 26.736 370.834158415842 24.3521301842016 21.26 0 0 cat,chimp,cow,dog,elephant,guinea_pig,horse,human,macaque,marmoset,mouse,opossum,orangutan,panda,pig,rabbit,rat, antisense antisense A549@0,AG04450@0,BJ@0,GM12878@0.103394,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0.0059535,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0.0109655, 0 0 0 0 ENSG00000223442.1 ENST00000417516.1 chr5:131973742-131991584 2 388 17452 exonic 0 1 0,0,0 0 0,0,0 133.268041237113 22.8942241576897 0 252.494845360825 19.2293719917488 19.349 252.190721649485 27.730689892276 13.385 0 0 human,marmoset,mouse,opossum,rabbit, antisense antisense A549@0,AG04450@0,BJ@0,GM12878@0.103394,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0.0059535,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0.0109655, 0 0 0 0 ENSG00000223442.1 ENST00000435042.1 chr5:131973768-131999964 4 468 25722 exonic 0 1 0,1,0 0 0,0,0 220.307692307692 19.0983982583003 9.24 392.346153846154 22.2918902107146 17.544 375.57264957265 27.6060570717674 14.817 0 0 cat,chimp,cow,dog,elephant,horse,human,macaque,marmoset,mouse,orangutan,panda,pig,rabbit,rat, antisense antisense A549@0,AG04450@0,BJ@0,GM12878@0.103394,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0.0059535,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0.0109655, 0 0 0 0 ENSG00000230612.1 ENST00000431165.1 chr5:132024373-132057275 3 499 32399 intronic 4.83 1 0,0,0 0 0,0,0 0 53.965832278774 0 0 62.1191703447637 0 0 66.2064569894133 0 0 0 chimp,dog,horse,human,macaque,orangutan, antisense antisense A549@0,AG04450@0,BJ@0,GM12878@0.108547,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000251616.1 ENST00000507389.1 chr5:132446747-132450167 2 676 2742 intergenic 2.49 0 0,0,1 0 0,0,0 0 0 0 6.47189349112426 7.92851932895697 0 6.71005917159763 12.4157549234136 0 0 0 cat,horse,human,macaque,marmoset,orangutan,panda, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0.006065,NHEK@0.00753133,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000248245.1 ENST00000509051.1 chr5:132496130-132559995 4 462 63397 exonic 2.12 0 0,0,0 0 0,0,0 17.0714285714286 8.66334369134186 0 33.4285714285714 11.5111282868275 0 39.2857142857143 19.8396138618547 0 0 0 chimp,guinea_pig,human,macaque,marmoset,mouse,orangutan,rat, antisense antisense A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0.007184,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0.00273933,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000248245.1 ENST00000502776.1 chr5:132545685-132560105 3 567 13849 exonic 2.12 0 0,0,0 0 0,0,0 13.9100529100529 9.02967723301321 0 27.2380952380952 9.95385948443931 0 32.010582010582 13.2999494548343 0 0 0 cat,chimp,cow,dog,elephant,horse,human,macaque,marmoset,orangutan,panda, antisense antisense A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0.007184,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0.00273933,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000249478.1 ENST00000504312.1 chr5:132579456-132582623 2 534 2631 intronic 2.76 0 0,0,0 0 0,0,0 0 44.6902318510072 170.352 0 59.5362979855568 230.694 0 57.9562903838845 231.402 0 0 cat,chimp,dog,horse,human,macaque,marmoset,orangutan,pig, antisense antisense A549@0.004425,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0.0043605,HEPG2@0,HMEC@0.007639,HSMM@0,HUVEC@0,K562@0,MCF7@0.0525135,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000249478.1 ENST00000515122.1 chr5:132579643-132584473 2 3140 1688 intronic 1.74 0 0,0,0 0 0,0,0 6.98726114649681 63.2701421800948 95.823 23.5996815286624 92.7962085308057 154.594 27.4805732484076 90.3335308056872 153.272 0 0 chimp,dog,elephant,horse,human,macaque,marmoset,orangutan, antisense antisense A549@0.004425,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0.0043605,HEPG2@0,HMEC@0.007639,HSMM@0,HUVEC@0,K562@0,MCF7@0.0525135,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000250244.1 ENST00000508950.1 chr5:132592184-132611669 2 262 19221 intronic 1.44 1 0,0,1 0 0,0,0 54.3893129770992 15.3338015711982 35.209 167.812977099237 24.7152593517507 22.909 164.286259541985 26.1977004318194 23.047 0 0 cat,chimp,cow,dog,elephant,guinea_pig,horse,human,macaque,marmoset,mouse,orangutan,panda,rabbit,rat, antisense antisense A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0.0052855,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000250244.1 ENST00000507403.1 chr5:132602277-132611669 3 386 9002 intronic 1.44 1 0,0,1 0 0,0,0 36.9170984455959 29.3762497222839 0 146.854922279793 43.2559431237503 0 178.284974093264 43.084203510331 0 0 0 cat,chimp,cow,dog,elephant,guinea_pig,horse,human,macaque,marmoset,mouse,orangutan,panda,pig,rabbit, antisense antisense A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0.0052855,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000250409.1 ENST00000507964.1 chr5:132723465-132724241 2 273 501 intronic -1.25 0 0,0,0 0 0,0,0 0 0 0 0 0 0 0 0 0 0 0 chimp,human,macaque,marmoset,orangutan,panda, antisense antisense A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000249073.1 ENST00000513561.1 chr5:133249368-133252960 3 680 2908 intergenic 2.11 0 0,1,0 0 0,0,0 0 0 0 0 4.10832187070151 0 0 4.34628610729023 6.984 0 0 chimp,elephant,horse,human,macaque,marmoset,orangutan,panda,pig, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0.0066435, 0 0 0 0 ENSG00000248559.1 ENST00000503470.1 chr5:133735186-133737612 2 518 1906 intergenic -1.41 0 0,1,0 0 0,0,0 0 0 18.18 0 0 4.541 0 1.23294858342078 8.9 0 0 chimp,elephant,horse,human,macaque,orangutan,panda, antisense antisense A549@0.057721,AG04450@0.168867,BJ@0.162058,GM12878@0.129905,H1HESC@0.028575,HELAS3@0.105775,HEPG2@0.0527375,HMEC@0.007874,HSMM@0,HUVEC@0.191803,K562@0.134483,MCF7@0.0352355,NHEK@0.0928303,NHLF@0.0111735,SKNSHRA@0.20843, 0 0 0 0 ENSG00000250564.1 ENST00000512748.1 chr5:133764742-133796306 3 666 30894 intergenic 0.63 1 0,0,1 0 0,0,0 0 13.099372046352 0 0 21.269987699877 0 0 20.4456528775814 3.159 1 1 chimp,human,macaque,marmoset,orangutan, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0.0460945,HELAS3@0.006987,HEPG2@0,HMEC@0,HSMM@0.010222,HUVEC@0,K562@0,MCF7@0.0030735,NHEK@0.00775433,NHLF@0.0116665,SKNSHRA@0, 0 0 0 0 ENSG00000250994.1 ENST00000513329.1 chr5:133772402-133828210 2 712 55094 intergenic 3.23 0 0,0,1 0 0,0,0 59.1025280898876 12.0449776745199 159.066 94.7036516853933 15.9666751370385 196.011 55.2205056179775 16.4106436272552 163.909 0 0 chimp,dog,elephant,guinea_pig,horse,human,marmoset,orangutan,panda,pig, lincRNA lincRNA A549@0.138729,AG04450@0.123432,BJ@0.467274,GM12878@0.0148765,H1HESC@0.978379,HELAS3@0.286824,HEPG2@0.011461,HMEC@0.022939,HSMM@0.028423,HUVEC@0.00979,K562@0,MCF7@0.055892,NHEK@0.005482,NHLF@0.053707,SKNSHRA@0.278693, 0 0 0 0 ENSG00000251169.1 ENST00000515627.1 chr5:133842243-133844415 2 600 1570 intergenic -1.66 0 0,1,0 1 0,0,0 0 0 11.472 0 0 39.479 0 0 40.018 0 0 chimp,elephant,human,macaque,marmoset,orangutan, lincRNA processed_transcript A549@1.20346,AG04450@0.007824,BJ@0,GM12878@0,H1HESC@0.006892,HELAS3@0.801751,HEPG2@1.16891,HMEC@0,HSMM@0,HUVEC@0,K562@0.133758,MCF7@0.613016,NHEK@0,NHLF@0.012893,SKNSHRA@0.016487, 0 0 0 0 ENSG00000250513.1 ENST00000507641.1 chr5:134369072-134482890 5 542 113268 intronic -5.79 0 0,1,0 1 0,1,0 28.7361623616236 32.1684412190557 53.803 4.11808118081181 38.9104954620899 36.823 4.77859778597786 37.521789031324 39.619 0 0 chimp,cow,guinea_pig,horse,human,macaque,marmoset,orangutan, antisense antisense A549@0.130069,AG04450@0.352202,BJ@0.194688,GM12878@0,H1HESC@0,HELAS3@0.332727,HEPG2@0.2916,HMEC@0.007486,HSMM@0.013674,HUVEC@0,K562@0.106945,MCF7@0.127667,NHEK@0.0534873,NHLF@0.0104565,SKNSHRA@0, 0 0 0 0 ENSG00000250513.1 ENST00000505828.1 chr5:134369132-134551255 5 556 181559 intronic 2.98 0 0,1,0 1 0,1,0 28.0125899280576 35.8573136005376 48.827 6.59352517985612 42.7371047428109 32.233 4.65827338129496 40.3807247230928 34.893 0 0 cat,chimp,cow,dog,elephant,horse,human,macaque,marmoset,orangutan,panda,pig,rabbit, antisense antisense A549@0.130069,AG04450@0.352202,BJ@0.194688,GM12878@0,H1HESC@0,HELAS3@0.332727,HEPG2@0.2916,HMEC@0.007486,HSMM@0.013674,HUVEC@0,K562@0.106945,MCF7@0.127667,NHEK@0.0534873,NHLF@0.0104565,SKNSHRA@0, 0 0 0 0 ENSG00000249082.1 ENST00000507035.1 chr5:134374528-134375737 2 834 373 intergenic 7.08 1 0,0,1 0 0,0,0 89.0707434052758 58.7024128686327 17.94 313.080335731415 28.4155495978552 21.623 330.732613908873 31.3404825737265 23.682 0 0 cat,chimp,cow,dog,elephant,guinea_pig,horse,human,macaque,marmoset,mouse,orangutan,rabbit,rat, lincRNA lincRNA A549@0.0161715,AG04450@0.002817,BJ@0.00428,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0.0098375,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000249082.1 ENST00000511256.1 chr5:134374531-134375386 2 475 378 intergenic 5.33 1 0,1,1 0 0,0,0 95.6652631578947 62.1851851851852 45.174 101.387368421053 28.8465608465608 79.665 119.393684210526 31.7539682539683 83.206 0 0 cat,chimp,cow,dog,elephant,guinea_pig,horse,human,macaque,marmoset,mouse,orangutan,panda,rabbit,rat, lincRNA lincRNA A549@0.0161715,AG04450@0.002817,BJ@0.00428,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0.0098375,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000248753.1 ENST00000507058.1 chr5:134456216-134475371 3 529 18622 intergenic 3.68 0 0,0,0 0 0,0,0 151.965973534972 29.8259048437332 0 189.587901701323 35.4749758350338 0 158.030245746692 35.4174095156267 0 0 0 cat,chimp,cow,dog,elephant,guinea_pig,horse,human,macaque,marmoset,mouse,orangutan,panda,rabbit,rat, lincRNA lincRNA A549@0.0162525,AG04450@0.0248585,BJ@0,GM12878@0,H1HESC@0,HELAS3@0.098493,HEPG2@0.019595,HMEC@0.017509,HSMM@0,HUVEC@0,K562@0.030687,MCF7@0.115726,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000248482.1 ENST00000509530.1 chr5:134460070-134466939 2 539 6328 intergenic 0.44 1 0,0,0 0 0,0,0 209.929499072356 19.7119152970923 107.623 214.43413729128 30.0412452591656 135.697 183.280148423006 30.3896965865992 132.213 0 0 cat,chimp,cow,dog,elephant,horse,human,macaque,marmoset,mouse,opossum,orangutan,panda,rabbit, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0.014717,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0.019887, 0 0 0 0 ENSG00000250513.1 ENST00000513931.1 chr5:134463845-134509862 2 338 45677 intergenic 6.33 0 0,0,0 0 0,1,0 0 17.3279768811437 32.76 4.24260355029586 27.4101845567791 30.783 0 27.4558749480045 48.244 0 0 cat,cow,dog,elephant,horse,human,macaque,marmoset,pig,rabbit, antisense antisense A549@0.130069,AG04450@0.352202,BJ@0.194688,GM12878@0,H1HESC@0,HELAS3@0.332727,HEPG2@0.2916,HMEC@0.007486,HSMM@0.013674,HUVEC@0,K562@0.106945,MCF7@0.127667,NHEK@0.0534873,NHLF@0.0104565,SKNSHRA@0, 0 0 0 0 ENSG00000249639.1 ENST00000510230.1 chr5:134786303-134794387 2 502 7580 intronic -2.96 0 0,0,1 0 0,0,0 0 0 7.887 40.4561752988048 1.78139841688654 50.419 47.199203187251 1.82849604221636 49.754 0 0 cat,chimp,cow,dog,elephant,human,macaque,marmoset,orangutan,panda,pig, antisense antisense A549@0.010961,AG04450@0.004447,BJ@0.0485155,GM12878@0.031838,H1HESC@0,HELAS3@0.0046375,HEPG2@0.0259015,HMEC@0.259976,HSMM@0.004523,HUVEC@0,K562@2.18849,MCF7@0,NHEK@0,NHLF@0.007743,SKNSHRA@0.013513, 0 0 0 0 ENSG00000250167.1 ENST00000509372.1 chr5:134895267-134970564 4 470 74821 encompassing -0.72 0 0,0,0 0 0,0,0 40.5957446808511 17.0137127277101 0 53.3617021276596 21.2575747450582 13.047 50.4489361702128 21.6927867844589 13.646 0 0 cat,chimp,cow,dog,horse,human,macaque,marmoset,orangutan,panda,rabbit, antisense antisense A549@0,AG04450@0,BJ@0,GM12878@0.008377,H1HESC@0.014981,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0.142707,MCF7@0,NHEK@0.0306383,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000250167.1 ENST00000514446.1 chr5:134914875-134970542 3 631 55032 exonic 0 0 0,1,0 0 0,0,0 30.2377179080824 12.0092855066143 133.803 62.3930269413629 15.7539249890972 225.635 59.9556259904913 16.2704789940398 194.233 0 0 chimp,cow,dog,elephant,guinea_pig,horse,human,macaque,marmoset,mouse,orangutan,panda,pig,rat, antisense antisense A549@0,AG04450@0,BJ@0,GM12878@0.008377,H1HESC@0.014981,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0.142707,MCF7@0,NHEK@0.0306383,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000251045.1 ENST00000508452.1 chr5:134984273-134989624 3 2138 3209 intergenic 3.23 0 0,0,1 0 0,0,0 29.7885874649205 0 1.656 24.5463049579046 0 15.626 24.5645463049579 0 14.95 0 0 chimp,guinea_pig,human,macaque,marmoset, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0.002169,MCF7@0,NHEK@0.00123333,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000250378.1 ENST00000506592.1 chr5:135148356-135162271 2 375 13538 intergenic 6.51 0 0,0,1 0 0,0,0 0 0 0 0 3.9847097060127 0 0 4.67188654158664 0 0 0 chimp,guinea_pig,horse,human,macaque,marmoset,orangutan, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0.0297225,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0.659886,MCF7@0,NHEK@0.338309,NHLF@0,SKNSHRA@0.0060285, 0 0 0 0 ENSG00000254239.1 ENST00000522973.1 chr5:135233326-135235939 2 412 2199 intergenic -0.81 0 0,0,1 0 0,0,0 0 0 0 0 0 0 0 0.854934060936789 0 0 0 chimp,horse,human,macaque,orangutan,pig, antisense antisense A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0.024081,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000253927.1 ENST00000523722.1 chr5:135236042-135253850 5 766 17034 intergenic 0.68 0 0,0,0 0 0,0,0 0 5.37331219913115 0 0 11.032112246096 0 0 12.166431842198 2.187 1 1 chimp,human,macaque,marmoset,orangutan, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000164621.5 ENST00000297163.3 chr5:135465196-135470579 2 1814 3567 intergenic 5.03 1 0,0,1 0 0,1,0 52.9658213891951 47.5923745444351 340.771 82.3897464167585 61.811606391926 276.646 95.1124586549063 57.4793944491169 272.394 0 0 cat,chimp,cow,elephant,guinea_pig,horse,human,macaque,marmoset,orangutan,panda, lincRNA antisense A549@0.043897,AG04450@0.06038,BJ@0.076836,GM12878@0.058356,H1HESC@0.0181955,HELAS3@0.145239,HEPG2@0.039964,HMEC@0.094699,HSMM@0.102538,HUVEC@0.038618,K562@0.0192325,MCF7@0.049264,NHEK@0.139349,NHLF@0.0597155,SKNSHRA@0.122999, 0 0 0 0 ENSG00000248211.1 ENST00000514459.1 chr5:135549736-135557847 2 458 7651 intronic 8.22 0 0,1,0 0 0,0,0 0 12.1050843027055 35.131 7.46506550218341 10.7159848385832 378.773 7.72052401746725 12.1910861325317 133.124 1 1 chimp,human,macaque,marmoset,orangutan, antisense antisense A549@0.192455,AG04450@0,BJ@0,GM12878@0.0236755,H1HESC@0,HELAS3@0,HEPG2@0.0118595,HMEC@0,HSMM@0.0183745,HUVEC@0,K562@0.0232815,MCF7@0.046739,NHEK@0.275687,NHLF@0,SKNSHRA@0.221229, 0 0 0 0 ENSG00000250947.1 ENST00000513958.1 chr5:135639445-135651788 3 703 11636 exonic 1.19 0 0,0,0 0 0,0,0 55.2887624466572 12.5869714678584 0 102.056899004267 18.3476280508766 0 95.7567567567568 16.9949295290478 0 0 0 cat,chimp,cow,elephant,horse,human,macaque,marmoset,orangutan,pig,rabbit, antisense antisense A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0.0259435,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000249612.1 ENST00000514282.1 chr5:135712036-135732730 2 412 20280 intergenic -5.44 0 0,0,0 0 0,0,0 0 3.74334319526627 0 4.81553398058252 17.6957100591716 1.434 5.02912621359223 30.4358974358974 1.506 0 0 chimp,cow,elephant,guinea_pig,horse,human,macaque,marmoset,orangutan, processed_transcript processed_transcript A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000249803.1 ENST00000511165.1 chr5:135802366-135844717 3 673 41674 intergenic -4.28 0 0,0,0 0 0,0,0 0 4.64874982003168 0 0 7.69189422661612 0 0 8.72280078706147 0 1 1 chimp,human,macaque,marmoset,orangutan, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0.01159,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@1.11279,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 1 96 0 0 ENSG00000249803.1 ENST00000446720.2 chr5:135802366-135855987 3 424 53193 intergenic 1.66 0 0,0,0 0 0,0,0 0 3.92297858740812 0 0 7.01823548211231 0 0 8.02312334329705 0 0 0 NA lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0.01159,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@1.11279,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000250284.1 ENST00000502421.1 chr5:136070616-136090375 3 561 19194 intergenic -2.12 0 0,0,0 0 0,0,0 0 0 0 0 1.36417630509534 1.195 0 1.7081379597791 1.215 0 0 chimp,cow,human,macaque,orangutan,rabbit, lincRNA lincRNA A549@0,AG04450@0,BJ@0.0087305,GM12878@0,H1HESC@0.028433,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0.846558,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000250159.1 ENST00000514616.1 chr5:137150022-137225006 5 822 74154 exonic -0.01 0 0,1,0 1 0,0,0 49.7493917274939 25.9630228982927 0 51.8990267639903 34.1826064676214 11.865 55.7725060827251 36.7196240256763 11.992 1 1 chimp,human,macaque,marmoset,orangutan, antisense antisense A549@0.58731,AG04450@0.249954,BJ@0.451945,GM12878@2.23104,H1HESC@0,HELAS3@1.93683,HEPG2@0.432762,HMEC@0.108515,HSMM@0.128605,HUVEC@0.325746,K562@1.76588,MCF7@0,NHEK@0.398643,NHLF@0.097052,SKNSHRA@1.87165, 0 0 0 0 ENSG00000250159.1 ENST00000508281.1 chr5:137219064-137225025 3 563 5394 exonic -0.17 0 1,1,1 1 0,0,0 244.483126110124 96.8377827215425 0 204.673179396092 69.9820170559881 11.865 188.650088809947 72.1357063403782 11.992 0 0 chimp,dog,guinea_pig,human,macaque,marmoset,orangutan,panda, antisense antisense A549@0.58731,AG04450@0.249954,BJ@0.451945,GM12878@2.23104,H1HESC@0,HELAS3@1.93683,HEPG2@0.432762,HMEC@0.108515,HSMM@0.128605,HUVEC@0.325746,K562@1.76588,MCF7@0,NHEK@0.398643,NHLF@0.097052,SKNSHRA@1.87165, 0 0 0 0 ENSG00000246323.2 ENST00000500267.2 chr5:137368463-137372955 2 1251 3239 exonic 6.87 0 0,1,1 0 0,0,0 20.7346123101519 2.86353812905218 43.634 42.0903277378098 37.0605125038592 67.212 43.1654676258993 38.701142327879 60.759 0 0 chimp,horse,human,macaque,marmoset,orangutan,pig, lincRNA processed_transcript A549@0.157585,AG04450@0.0188485,BJ@0.174751,GM12878@0.192127,H1HESC@0.422384,HELAS3@0.553638,HEPG2@0.139058,HMEC@0.039214,HSMM@0.019835,HUVEC@0.0598155,K562@0.172343,MCF7@0.290274,NHEK@0.0310223,NHLF@0.0124575,SKNSHRA@0.0805025, 0 0 0 0 ENSG00000250260.1 ENST00000506911.1 chr5:137374888-137375668 2 644 134 intronic -5.87 0 0,1,0 0 0,0,0 0 0 183.392 14.6257763975155 0 170.318 11.7639751552795 0 145.591 0 0 chimp,dog,human,macaque,marmoset,orangutan, lincRNA lincRNA A549@0.0889265,AG04450@0.021096,BJ@0.0350215,GM12878@0.268625,H1HESC@0.194974,HELAS3@0.551956,HEPG2@0.0695215,HMEC@0,HSMM@0.0035285,HUVEC@0.203645,K562@0.0489325,MCF7@0.269765,NHEK@0.028694,NHLF@0.020908,SKNSHRA@0.0769915, 0 0 0 0 ENSG00000249971.1 ENST00000504539.1 chr5:137682716-137685330 2 409 2203 exonic 3.06 1 0,1,1 0 0,0,0 619.863080684597 231.328188833409 156.768 724.860635696821 306.222423967317 218.304 631.860635696822 257.986382206083 217.315 0 0 cat,chimp,cow,dog,elephant,guinea_pig,horse,human,macaque,marmoset,mouse,opossum,orangutan,panda,pig,rabbit,rat, antisense antisense A549@0.0105625,AG04450@0,BJ@0,GM12878@0,H1HESC@0.0072305,HELAS3@0.020312,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0.0129945,K562@0.026292,MCF7@0,NHEK@0.0112193,NHLF@0.0046945,SKNSHRA@0.0221195, 0 0 0 0 ENSG00000253404.1 ENST00000520838.1 chr5:138080123-138088998 2 585 8288 exonic -3.47 0 1,1,1 0 0,0,0 3.00854700854701 0 11.44 22.6940170940171 7.54416023166023 108.651 22.3213675213675 9.45789092664093 101.686 0 1 chimp,human,macaque, antisense antisense A549@0.448076,AG04450@0.005493,BJ@0,GM12878@0.04121,H1HESC@0.202423,HELAS3@0.316605,HEPG2@0,HMEC@0.055804,HSMM@0.007767,HUVEC@0.0082845,K562@0.008368,MCF7@1.36067,NHEK@0.072707,NHLF@0.136284,SKNSHRA@0.02709, 0 0 0 0 ENSG00000249593.2 ENST00000514207.1 chr5:138348336-138349377 2 246 793 intronic -5.70 0 0,1,0 0 0,0,0 0 0 0 0 0 0 13.3739837398374 0 0 1 1 chimp,human,macaque,marmoset,orangutan, antisense antisense A549@0.009304,AG04450@0,BJ@0,GM12878@0,H1HESC@0.0142015,HELAS3@0,HEPG2@0,HMEC@0.010198,HSMM@0,HUVEC@0,K562@0,MCF7@0.192136,NHEK@0.002827,NHLF@0.002403,SKNSHRA@0.0046475, 0 0 0 0 ENSG00000249593.2 ENST00000504658.1 chr5:138348339-138349913 2 801 771 intronic -5.45 0 0,1,0 0 0,0,0 0 0 0 5.26342072409488 0 0 17.2521847690387 0 0 0 0 chimp,dog,human,macaque,marmoset,orangutan,panda, antisense antisense A549@0.009304,AG04450@0,BJ@0,GM12878@0,H1HESC@0.0142015,HELAS3@0,HEPG2@0,HMEC@0.010198,HSMM@0,HUVEC@0,K562@0,MCF7@0.192136,NHEK@0.002827,NHLF@0.002403,SKNSHRA@0.0046475, 0 0 0 0 ENSG00000249593.2 ENST00000510110.1 chr5:138348339-138358297 3 1064 8890 exonic 1.84 0 0,1,0 0 0,0,0 38.6578947368421 27.2182227221597 0 63.1353383458647 36.8050618672666 0 64.5968045112782 39.7952755905512 0 0 0 chimp,dog,elephant,horse,human,macaque,marmoset,orangutan,panda, antisense antisense A549@0.009304,AG04450@0,BJ@0,GM12878@0,H1HESC@0.0142015,HELAS3@0,HEPG2@0,HMEC@0.010198,HSMM@0,HUVEC@0,K562@0,MCF7@0.192136,NHEK@0.002827,NHLF@0.002403,SKNSHRA@0.0046475, 0 0 0 0 ENSG00000249593.2 ENST00000512875.2 chr5:138348339-138386892 5 726 37819 exonic -3.35 0 0,1,0 0 0,0,0 30.5895316804408 24.6569449218647 0 35.2906336088154 31.9993653983448 0 47.004132231405 40.2679869906661 0 1 1 chimp,human,macaque,marmoset,orangutan, antisense antisense A549@0.009304,AG04450@0,BJ@0,GM12878@0,H1HESC@0.0142015,HELAS3@0,HEPG2@0,HMEC@0.010198,HSMM@0,HUVEC@0,K562@0,MCF7@0.192136,NHEK@0.002827,NHLF@0.002403,SKNSHRA@0.0046475, 0 0 0 0 ENSG00000249758.1 ENST00000503553.1 chr5:138700366-138705406 2 662 4376 exonic -8.54 0 1,1,1 0 0,0,0 191.407854984894 60.1860146252285 10.773 297.441087613293 93.1090036563071 14.46 308.981873111783 86.2141224862888 15.435 0 0 cat,chimp,cow,dog,elephant,guinea_pig,horse,human,macaque,marmoset,mouse,opossum,orangutan,panda,pig,rabbit,rat, processed_transcript processed_transcript A549@0.031603,AG04450@0.002717,BJ@0.0294095,GM12878@0.056621,H1HESC@0,HELAS3@0.0684335,HEPG2@0.031572,HMEC@0,HSMM@0,HUVEC@0,K562@0.0239745,MCF7@0.0121115,NHEK@0.00893667,NHLF@0,SKNSHRA@0.0141115, 0 0 0 0 ENSG00000250635.1 ENST00000514287.1 chr5:139028584-139029313 2 575 152 exonic 0 0 0,1,1 0 0,0,0 24.5286956521739 0 27.057 378.333913043478 197.065789473684 205.078 318.313043478261 197.842105263158 199.877 0 0 cat,chimp,cow,dog,elephant,guinea_pig,horse,human,macaque,marmoset,mouse,panda,pig,rabbit,rat, lincRNA lincRNA A549@0,AG04450@0,BJ@0.012582,GM12878@0.0301665,H1HESC@0.03002,HELAS3@0.009199,HEPG2@0.0075415,HMEC@0,HSMM@0.037199,HUVEC@0,K562@0.008513,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000249526.1 ENST00000515296.1 chr5:139064230-139124595 6 562 59793 intergenic 1.83 0 0,1,0 0 0,0,0 10.3131672597865 49.2897830849765 89.541 12.8576512455516 58.7857943237503 111.721 14.8967971530249 58.0862475540615 114.664 0 0 chimp,elephant,horse,human,macaque,marmoset,orangutan, lincRNA lincRNA A549@0.0141495,AG04450@0,BJ@0.012598,GM12878@0.165603,H1HESC@0.0569985,HELAS3@0.029395,HEPG2@0.033096,HMEC@0,HSMM@0.007245,HUVEC@0.028208,K562@0.0630485,MCF7@0.228131,NHEK@0,NHLF@0,SKNSHRA@0.0306925, 0 0 0 0 ENSG00000249131.1 ENST00000515306.1 chr5:139120934-139125808 3 409 4461 intergenic 1.83 1 0,0,0 0 0,0,0 3.14180929095355 27.6079354404842 37.631 13.5745721271394 26.91123066577 102.649 25.5232273838631 27.7296570275723 87.979 0 0 cat,chimp,cow,dog,elephant,guinea_pig,horse,human,marmoset,orangutan,panda, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0.0176805,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0.013057, 0 0 0 0 ENSG00000251387.1 ENST00000506892.1 chr5:139152113-139154991 2 551 2325 intergenic 1.60 0 0,1,1 0 0,0,0 0 0 0 68.4410163339383 2.69376344086022 4.7 70.7441016333938 2.73677419354839 4.837 0 1 chimp,human,macaque,orangutan, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0.007404,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000250692.1 ENST00000504413.1 chr5:139227875-139235974 3 466 7629 exonic 3.29 0 0,1,1 0 0,0,0 132.534334763948 34.1475947044174 133.479 326.733905579399 68.6726962904706 482.944 329.263948497854 57.4578581727619 501.517 0 0 chimp,cow,dog,elephant,guinea_pig,horse,human,macaque,marmoset,mouse,opossum,orangutan,pig,rabbit,rat, antisense antisense A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0.016055,NHEK@0,NHLF@0,SKNSHRA@0.029076, 0 0 0 0 ENSG00000245146.2 ENST00000523452.1 chr5:139452442-139488215 3 552 35217 intergenic -5.63 0 0,1,1 0 0,0,0 85.3423913043478 29.8882357952125 302.814 60.7373188405797 41.0854700854701 146.761 56.2355072463768 39.8911605190675 123.014 0 0 chimp,elephant,guinea_pig,horse,human,macaque,marmoset,orangutan, lincRNA processed_transcript A549@0.307489,AG04450@0.06492,BJ@0.110608,GM12878@0.2587,H1HESC@0.0421705,HELAS3@0.737583,HEPG2@0.147414,HMEC@0.273947,HSMM@0.0822855,HUVEC@0.0435595,K562@0.300571,MCF7@0.520832,NHEK@0.197623,NHLF@0.282747,SKNSHRA@0.166855, 0 0 0 0 ENSG00000245146.2 ENST00000499203.2 chr5:139482507-139487228 3 2766 1951 intergenic 5.70 0 1,1,1 0 0,0,0 9.44902386117137 92.6832393644285 377.398 44.5994215473608 116.274730907227 451.97 44.2527114967462 117.366478728857 412.168 0 0 cat,chimp,dog,elephant,human,macaque,marmoset,orangutan,panda,rabbit, lincRNA processed_transcript A549@0.307489,AG04450@0.06492,BJ@0.110608,GM12878@0.2587,H1HESC@0.0421705,HELAS3@0.737583,HEPG2@0.147414,HMEC@0.273947,HSMM@0.0822855,HUVEC@0.0435595,K562@0.300571,MCF7@0.520832,NHEK@0.197623,NHLF@0.282747,SKNSHRA@0.166855, 0 0 0 0 ENSG00000245146.2 ENST00000522747.1 chr5:139483418-139487051 4 1040 2587 intergenic -0.45 0 0,0,1 0 0,0,0 25.1307692307692 69.897564746811 327.991 98.2105769230769 88.4282953227677 444.51 88.9182692307692 91.1569385388481 403.271 0 0 chimp,cow,guinea_pig,horse,human,macaque,marmoset,orangutan, lincRNA processed_transcript A549@0.307489,AG04450@0.06492,BJ@0.110608,GM12878@0.2587,H1HESC@0.0421705,HELAS3@0.737583,HEPG2@0.147414,HMEC@0.273947,HSMM@0.0822855,HUVEC@0.0435595,K562@0.300571,MCF7@0.520832,NHEK@0.197623,NHLF@0.282747,SKNSHRA@0.166855, 0 0 0 0 ENSG00000245146.2 ENST00000521563.1 chr5:139483425-139487234 4 935 2868 intergenic 5.70 0 1,1,1 0 0,0,0 0 72.1621338912134 377.398 37.4524064171123 108.940725244073 451.97 38.544385026738 107.544281729428 412.168 0 0 cat,chimp,cow,guinea_pig,horse,human,macaque,marmoset,orangutan,panda, lincRNA processed_transcript A549@0.307489,AG04450@0.06492,BJ@0.110608,GM12878@0.2587,H1HESC@0.0421705,HELAS3@0.737583,HEPG2@0.147414,HMEC@0.273947,HSMM@0.0822855,HUVEC@0.0435595,K562@0.300571,MCF7@0.520832,NHEK@0.197623,NHLF@0.282747,SKNSHRA@0.166855, 0 0 0 0 ENSG00000245146.2 ENST00000520928.1 chr5:139484887-139486067 2 646 532 intergenic -5.63 0 0,0,1 0 0,0,0 30.328173374613 35.0657894736842 26.136 35.5588235294118 98.8082706766917 92.879 24.8359133126935 97.3101503759399 90.435 0 0 cat,chimp,cow,dog,guinea_pig,horse,human,macaque,marmoset,orangutan,panda,rabbit,rat, lincRNA processed_transcript A549@0.307489,AG04450@0.06492,BJ@0.110608,GM12878@0.2587,H1HESC@0.0421705,HELAS3@0.737583,HEPG2@0.147414,HMEC@0.273947,HSMM@0.0822855,HUVEC@0.0435595,K562@0.300571,MCF7@0.520832,NHEK@0.197623,NHLF@0.282747,SKNSHRA@0.166855, 0 0 0 0 ENSG00000245146.2 ENST00000521133.1 chr5:139485010-139488173 2 452 2709 intergenic -5.63 0 0,1,0 0 0,0,0 140.78982300885 138.31561461794 282.059 73.924778761062 217.775932078258 145.762 65.4336283185841 201.805094130676 121.238 0 0 cat,chimp,cow,dog,elephant,guinea_pig,horse,human,macaque,marmoset,mouse,orangutan,panda,rabbit,rat, lincRNA processed_transcript A549@0.307489,AG04450@0.06492,BJ@0.110608,GM12878@0.2587,H1HESC@0.0421705,HELAS3@0.737583,HEPG2@0.147414,HMEC@0.273947,HSMM@0.0822855,HUVEC@0.0435595,K562@0.300571,MCF7@0.520832,NHEK@0.197623,NHLF@0.282747,SKNSHRA@0.166855, 0 0 0 0 ENSG00000245146.2 ENST00000518790.1 chr5:139485185-139488150 3 448 2513 intergenic -5.63 0 0,1,0 0 0,0,0 78.6517857142857 149.103461997612 278.034 36.9486607142857 234.761241543971 149.517 35.1763392857143 217.061281337047 124.882 0 0 cat,chimp,cow,elephant,guinea_pig,horse,human,macaque,marmoset,orangutan,panda, lincRNA processed_transcript A549@0.307489,AG04450@0.06492,BJ@0.110608,GM12878@0.2587,H1HESC@0.0421705,HELAS3@0.737583,HEPG2@0.147414,HMEC@0.273947,HSMM@0.0822855,HUVEC@0.0435595,K562@0.300571,MCF7@0.520832,NHEK@0.197623,NHLF@0.282747,SKNSHRA@0.166855, 0 0 0 0 ENSG00000254363.1 ENST00000523154.1 chr5:139536904-139548370 5 578 10880 intergenic 6.86 0 0,0,0 0 0,0,0 0 20.2436580882353 0 19.5882352941176 25.1737132352941 18.007 20.5173010380623 24.2155330882353 15.213 1 1 chimp,human,macaque,marmoset,orangutan, lincRNA lincRNA A549@0.0871045,AG04450@0.115765,BJ@0.994067,GM12878@0.216575,H1HESC@0,HELAS3@0.414242,HEPG2@0.819987,HMEC@0,HSMM@0.099582,HUVEC@0.222046,K562@0.079713,MCF7@0.352705,NHEK@0.0862187,NHLF@0.129865,SKNSHRA@0.443095, 0 0 0 0 ENSG00000250069.1 ENST00000508713.1 chr5:139579748-139582772 1 3024 0 intronic -5.02 0 0,0,0 0 0,0,0 14.1230158730159 0 0 0.521825396825397 0 0 0.525793650793651 0 0 0 1 chimp,human,macaque,orangutan, sense_intronic sense_intronic A549@0.19531,AG04450@0.0165915,BJ@0.053507,GM12878@0.749923,H1HESC@0.144057,HELAS3@0.346741,HEPG2@0.323739,HMEC@0.008322,HSMM@0.0111355,HUVEC@0.222457,K562@0.729722,MCF7@0.095392,NHEK@0.151948,NHLF@0.008415,SKNSHRA@0.13335, 0 0 0 0 ENSG00000253965.1 ENST00000520443.1 chr5:139728069-139737379 2 568 8740 intergenic -2.44 0 0,0,0 0 0,0,0 41.6056338028169 4.71109839816934 0 67.8943661971831 4.64393592677346 29.743 62.8274647887324 6.47368421052632 30.494 0 0 cat,chimp,elephant,guinea_pig,horse,human,macaque,marmoset,orangutan,panda,rabbit, antisense antisense A549@0.041862,AG04450@0.0372825,BJ@0.0042455,GM12878@0.0205225,H1HESC@0.039749,HELAS3@0.0321215,HEPG2@0,HMEC@0,HSMM@0.0119975,HUVEC@0.088111,K562@0,MCF7@0.306364,NHEK@0,NHLF@0.003423,SKNSHRA@0.247724, 0 0 0 0 ENSG00000249637.1 ENST00000507521.1 chr5:139750476-139780952 2 547 29927 exonic 0 0 1,1,1 1 0,0,0 87.4149908592322 12.4952049988305 431.942 130.612431444241 24.2236442008888 521.037 130.303473491773 23.583352825208 524.767 0 0 elephant,guinea_pig,horse,human,panda,pig,rat, antisense antisense A549@0.02738,AG04450@0.013765,BJ@0.008816,GM12878@0.146921,H1HESC@0.077256,HELAS3@0.200057,HEPG2@0.200543,HMEC@0,HSMM@0,HUVEC@0.0352855,K562@0.26255,MCF7@0.036953,NHEK@0.0165153,NHLF@0.003554,SKNSHRA@0.0496425, 0 0 0 0 ENSG00000246422.2 ENST00000502205.2 chr5:140937878-140944830 3 2477 4471 intronic -1.30 0 0,0,1 0 0,0,0 25.6701655228099 38.2263475732498 38.864 37.4751715785224 35.8747483784388 99.957 38.3831247476786 36.6114963095504 104.322 0 0 chimp,cow,elephant,horse,human,macaque,marmoset,orangutan,rabbit, antisense antisense A549@0,AG04450@0.005201,BJ@0,GM12878@0,H1HESC@0,HELAS3@0.00107,HEPG2@0,HMEC@0,HSMM@0.0016595,HUVEC@0,K562@0.0010795,MCF7@0.0032425,NHEK@0,NHLF@0,SKNSHRA@0.003084, 0 0 0 0 ENSG00000228737.1 ENST00000422040.1 chr5:140997981-141006048 3 619 7444 exonic 1.65 1 1,1,1 1 0,0,0 83.7156704361874 55.1540838259001 39.875 126.78352180937 80.9052928533047 80.111 127.021001615509 79.0323750671682 65.875 0 0 cat,chimp,cow,dog,elephant,guinea_pig,horse,human,macaque,marmoset,mouse,orangutan,panda,pig,rabbit,rat, antisense antisense A549@0.074864,AG04450@0,BJ@0,GM12878@0.058261,H1HESC@0.015913,HELAS3@0.473706,HEPG2@0.0209875,HMEC@0.144826,HSMM@0,HUVEC@0,K562@0.142865,MCF7@0.301328,NHEK@0.0542353,NHLF@0.003137,SKNSHRA@0.010962, 0 0 0 0 ENSG00000246581.1 ENST00000501052.1 chr5:141227143-141231803 2 3690 968 intergenic 7.41 0 0,0,0 0 0,0,0 148.187804878049 184.532024793388 0 199.068834688347 279.794421487603 10.861 192.278590785908 271.51652892562 12.705 0 0 chimp,guinea_pig,human,macaque,marmoset,mouse, lincRNA lincRNA A549@0.050886,AG04450@0.009622,BJ@0.005259,GM12878@0.0140425,H1HESC@0.0596295,HELAS3@0.061925,HEPG2@0.0350535,HMEC@0.173776,HSMM@0,HUVEC@0.0257555,K562@0.009617,MCF7@0.04978,NHEK@0,NHLF@0,SKNSHRA@0.018911, 0 0 0 0 ENSG00000254099.1 ENST00000520882.1 chr5:141350202-141362252 3 341 11705 exonic -5.10 0 0,1,1 0 0,0,0 85.8475073313783 86.7389149935925 172.81 69.0410557184751 80.9518154634771 122.461 52.1378299120235 77.0518581802648 99.708 0 0 cat,chimp,horse,human,macaque,marmoset,mouse,orangutan,rat, antisense antisense A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000231185.2 ENST00000510311.1 chr5:141704858-141843619 4 587 138168 intergenic 2.83 0 0,1,0 1 0,0,0 49.3185689948893 13.8424020033582 337.539 116.313458262351 18.0744890278502 338.211 114.678023850085 19.2580771235018 259.22 0 0 cat,chimp,dog,elephant,horse,human,macaque,marmoset,orangutan,panda,pig, processed_transcript processed_transcript A549@0.55818,AG04450@0.440712,BJ@0.428785,GM12878@0.218787,H1HESC@0.413739,HELAS3@0.447887,HEPG2@1.04755,HMEC@0.238542,HSMM@0.163423,HUVEC@0.117829,K562@0.668314,MCF7@0.033856,NHEK@0.723798,NHLF@0.208589,SKNSHRA@1.81019, 0 0 0 0 ENSG00000231185.2 ENST00000515288.1 chr5:141704863-141733186 3 536 27783 intergenic 2.29 0 0,1,1 1 0,0,0 51.8507462686567 6.95889572760321 338.311 121.690298507463 12.3017672677537 341.261 120.067164179104 12.8369146600439 262.18 0 0 cat,chimp,cow,dog,elephant,horse,human,macaque,marmoset,orangutan,panda,pig, processed_transcript processed_transcript A549@0.55818,AG04450@0.440712,BJ@0.428785,GM12878@0.218787,H1HESC@0.413739,HELAS3@0.447887,HEPG2@1.04755,HMEC@0.238542,HSMM@0.163423,HUVEC@0.117829,K562@0.668314,MCF7@0.033856,NHEK@0.723798,NHLF@0.208589,SKNSHRA@1.81019, 0 0 0 0 ENSG00000231185.2 ENST00000514303.1 chr5:141733108-141755219 3 149 21958 intergenic 0 0 0,1,0 0 0,0,0 0 18.9420712268877 0 0 22.5935422169597 4.08 0 25.3052190545587 4.24 0 1 chimp,human,marmoset,orangutan, processed_transcript processed_transcript A549@0.55818,AG04450@0.440712,BJ@0.428785,GM12878@0.218787,H1HESC@0.413739,HELAS3@0.447887,HEPG2@1.04755,HMEC@0.238542,HSMM@0.163423,HUVEC@0.117829,K562@0.668314,MCF7@0.033856,NHEK@0.723798,NHLF@0.208589,SKNSHRA@1.81019, 0 0 0 0 ENSG00000231185.2 ENST00000443800.1 chr5:141783766-142051566 4 562 267232 intronic 0.33 0 0,0,1 0 0,0,0 117.501779359431 18.5696585738235 58.074 41.5302491103203 24.3419687761945 46.302 43.6975088967972 25.6206704286911 45.041 0 0 chimp,cow,dog,elephant,guinea_pig,human,macaque,marmoset,orangutan,rabbit, processed_transcript processed_transcript A549@0.55818,AG04450@0.440712,BJ@0.428785,GM12878@0.218787,H1HESC@0.413739,HELAS3@0.447887,HEPG2@1.04755,HMEC@0.238542,HSMM@0.163423,HUVEC@0.117829,K562@0.668314,MCF7@0.033856,NHEK@0.723798,NHLF@0.208589,SKNSHRA@1.81019, 0 0 0 0 ENSG00000231185.2 ENST00000425963.1 chr5:141783783-141909695 3 359 125549 intergenic 0.33 0 0,0,1 0 0,0,0 135.493036211699 19.5627842515671 64.908 43.9220055710306 27.2161466837649 46.302 44.6852367688022 28.7841320918526 45.041 0 0 chimp,cow,dog,elephant,guinea_pig,horse,human,macaque,marmoset,orangutan,pig,rabbit, processed_transcript processed_transcript A549@0.55818,AG04450@0.440712,BJ@0.428785,GM12878@0.218787,H1HESC@0.413739,HELAS3@0.447887,HEPG2@1.04755,HMEC@0.238542,HSMM@0.163423,HUVEC@0.117829,K562@0.668314,MCF7@0.033856,NHEK@0.723798,NHLF@0.208589,SKNSHRA@1.81019, 0 0 0 0 ENSG00000231185.2 ENST00000414314.1 chr5:141961413-142006755 2 519 44821 intronic -1.78 0 0,0,0 0 0,0,0 7.63005780346821 20.8432654336137 6.38 4.14450867052023 24.0189197028179 0 4.21387283236994 25.0057339193681 6.526 0 0 chimp,horse,human,macaque,marmoset,orangutan, processed_transcript processed_transcript A549@0.55818,AG04450@0.440712,BJ@0.428785,GM12878@0.218787,H1HESC@0.413739,HELAS3@0.447887,HEPG2@1.04755,HMEC@0.238542,HSMM@0.163423,HUVEC@0.117829,K562@0.668314,MCF7@0.033856,NHEK@0.723798,NHLF@0.208589,SKNSHRA@1.81019, 0 0 0 0 ENSG00000236714.1 ENST00000432677.1 chr5:142125165-142140563 4 2233 13159 intergenic 1.32 1 0,0,0 0 0,0,0 17.9126735333632 17.4372672695494 0 3.65114196148679 7.87575043696329 2.893 7.63546798029557 9.98115358309902 2.992 0 0 chimp,elephant,guinea_pig,horse,human,macaque,marmoset,orangutan,pig, lincRNA lincRNA A549@0.0303115,AG04450@0.016607,BJ@0.0226965,GM12878@0.012888,H1HESC@0.567115,HELAS3@0.024257,HEPG2@0.200198,HMEC@0.003661,HSMM@0.0309485,HUVEC@0,K562@0.002076,MCF7@0.020139,NHEK@0.00460167,NHLF@0.0078305,SKNSHRA@0.254945, 0 0 0 0 ENSG00000226272.1 ENST00000433595.1 chr5:142239169-142248475 6 972 8324 intronic 8.92 1 0,0,0 0 0,0,0 20.3302469135802 19.8175156174916 0 8.19341563786008 18.2829168668909 0 11.1944444444444 18.2640557424315 0 0 0 chimp,dog,human,macaque,marmoset,orangutan, antisense antisense A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0.0112715,NHEK@0,NHLF@0,SKNSHRA@0.003109, 0 0 0 0 ENSG00000226272.1 ENST00000432015.1 chr5:142239169-142248481 5 709 8595 intronic 4.25 1 0,0,0 0 0,0,0 16.5176304654443 20.1292611983711 0 1.68547249647391 18.4940081442699 0 0 18.9541593949971 0 0 0 chimp,human,macaque,marmoset,orangutan, antisense antisense A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0.0112715,NHEK@0,NHLF@0,SKNSHRA@0.003109, 0 0 0 0 ENSG00000226272.1 ENST00000434610.1 chr5:142239169-142248487 5 726 8584 intronic 4.25 1 0,0,0 0 0,0,0 16.1308539944904 20.155055917987 0 1.64600550964187 18.5177073625349 0 0 18.9784482758621 0 0 0 chimp,human,macaque,marmoset,orangutan, antisense antisense A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0.0112715,NHEK@0,NHLF@0,SKNSHRA@0.003109, 0 0 0 0 ENSG00000230789.1 ENST00000433186.1 chr5:142572065-142573731 2 386 1278 intronic 4.77 0 0,0,0 0 0,0,0 4.55958549222798 0 0 0 0 0 0 0 0.972 0 0 chimp,cow,horse,human,macaque,marmoset,orangutan,panda, sense_intronic sense_intronic A549@0.117477,AG04450@0.0018645,BJ@0.019932,GM12878@0.0242935,H1HESC@0.0639935,HELAS3@0.0077405,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0.013594,NHEK@0,NHLF@0,SKNSHRA@0.544085, 0 0 0 0 ENSG00000249429.1 ENST00000340585.6 chr5:142869420-142910915 2 558 40935 intergenic -2.35 0 0,0,1 0 0,0,0 0 15.3289116892635 0 0 23.2990839135214 10.218 0 24.8041529253695 10.416 1 1 chimp,human,macaque,marmoset,orangutan, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 1 96 0 0 ENSG00000251205.2 ENST00000514942.2 chr5:142938784-142942113 4 521 2802 intergenic -1.78 0 0,0,0 0 0,0,0 40.2418426103647 45.536045681656 0 23.0134357005758 24.5278372591006 0 15.0595009596929 25.7323340471092 3.402 0 0 cat,chimp,elephant,horse,human,macaque,marmoset,opossum,orangutan,panda,pig, lincRNA lincRNA A549@0.014657,AG04450@0,BJ@0.0321475,GM12878@0,H1HESC@0,HELAS3@0.020862,HEPG2@0.0573595,HMEC@0,HSMM@0.0078385,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0.0073505,SKNSHRA@0, 0 0 0 0 ENSG00000249881.1 ENST00000503323.1 chr5:142985193-143208337 5 820 222316 encompassing 0.77 0 0,0,0 0 0,0,0 0 7.79826463232516 38.511 20.319512195122 11.1915921481135 87.955 18.9890243902439 14.8365974558736 68.637 0 0 chimp,cow,dog,elephant,guinea_pig,horse,human,macaque,marmoset,orangutan,rabbit, processed_transcript processed_transcript A549@0,AG04450@0,BJ@0,GM12878@0.027763,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000249605.1 ENST00000505261.1 chr5:143748897-143764873 5 464 15504 intronic -0.49 0 0,0,0 0 0,0,0 18.0280172413793 7.58449432404541 26.46 44.698275862069 18.6800825593395 28.77 48.8103448275862 23.3273348813209 31.463 0 0 chimp,cow,dog,elephant,guinea_pig,horse,human,macaque,marmoset,mouse,orangutan,panda,pig, sense_intronic sense_intronic A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000251031.1 ENST00000504204.1 chr5:144602173-144608545 2 491 5879 intergenic 2.60 0 0,0,0 0 0,0,0 0 42.7593128083007 0 0 45.0306174519476 0 200.81466395112 43.6171117536996 521.881 0 0 cat,chimp,human,macaque,marmoset,orangutan,rat, lincRNA lincRNA A549@0.0859495,AG04450@0.136289,BJ@0.084697,GM12878@0,H1HESC@0.116869,HELAS3@0.50056,HEPG2@0.40027,HMEC@0,HSMM@0,HUVEC@0.288516,K562@0.0532545,MCF7@0,NHEK@0.005356,NHLF@0.003958,SKNSHRA@0.0410025, 0 0 0 0 ENSG00000250842.1 ENST00000504620.1 chr5:144717495-144761233 2 528 43208 intergenic -10.09 0 0,0,0 0 0,0,0 0 10.5038187372709 0 0 16.150041658952 0 0 16.3709266802444 0 0 0 chimp,cow,dog,guinea_pig,horse,human,macaque,mouse,orangutan,panda,pig, lincRNA lincRNA A549@0.01628,AG04450@0.080331,BJ@0.101537,GM12878@0,H1HESC@0.112144,HELAS3@0.0085265,HEPG2@0.0158215,HMEC@0,HSMM@0.008602,HUVEC@0.453952,K562@0.275064,MCF7@0.0037935,NHEK@0.0123337,NHLF@0,SKNSHRA@0.044441, 0 0 0 0 ENSG00000248125.1 ENST00000512571.1 chr5:144809431-144820738 3 651 10652 intergenic -0.69 0 0,0,0 0 0,0,0 14.3179723502304 15.647390161472 0 20.8617511520737 30.4873263236951 0 27.0660522273425 28.1339654524972 0 0 0 chimp,cow,elephant,guinea_pig,horse,human,macaque,marmoset,orangutan,panda,pig,rabbit, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000248125.1 ENST00000513657.1 chr5:144809466-144830662 2 466 20728 intergenic -0.59 0 0,0,1 0 0,0,0 0 15.8206291007333 0 0 30.8018622153609 0 0 31.5389328444616 0 0 0 cat,chimp,cow,dog,elephant,guinea_pig,horse,human,macaque,marmoset,orangutan,panda,rabbit, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000251556.1 ENST00000514002.1 chr5:145478969-145499975 3 436 20566 exonic 1.82 0 0,0,1 0 0,0,0 40.4082568807339 6.88860254789458 0 64.7683486238532 20.9229796751921 0 63.2454128440367 24.1806865700671 0 0 0 chimp,cow,dog,elephant,horse,human,macaque,marmoset,orangutan,pig,rabbit, antisense antisense A549@0.0076825,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0.0159715,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0.14528,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000250025.1 ENST00000515598.1 chr5:145686661-145756526 3 579 69282 encompassing 3.84 0 0,0,0 0 0,0,0 0 40.3561675471262 62.914 0 55.2190900955515 47.666 0 54.8718859155336 59.225 0 0 chimp,dog,human,macaque,marmoset,orangutan,rabbit, antisense antisense A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000250025.1 ENST00000511390.1 chr5:145740258-145754988 3 372 14354 intergenic -4.54 0 0,0,0 0 0,0,0 0 25.8053504249687 0 0 38.478542566532 1.912 0 38.7946217082346 2.008 1 1 chimp,human,macaque,marmoset,orangutan, antisense antisense A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000250025.1 ENST00000508845.1 chr5:145755154-145755782 2 510 116 intergenic -23.07 0 0,0,0 0 0,0,0 0 0 62.914 0 0 47.666 0 0 55.46 0 1 chimp,human,marmoset,orangutan, antisense antisense A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000248842.1 ENST00000507391.1 chr5:145780544-145786922 2 310 6066 intergenic -1.04 0 0,0,0 0 0,0,0 54.7870967741936 33.8208044840092 35.608 66.0774193548387 32.3925156610617 38.467 76.7322580645161 33.3150346191889 46.409 0 0 chimp,cow,dog,elephant,guinea_pig,horse,human,marmoset,orangutan,panda,pig,rabbit, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000250407.1 ENST00000512730.1 chr5:145942789-145996567 4 687 53085 intronic 1.37 0 0,1,0 0 0,0,0 157.205240174672 14.6403127060375 26.22 156.34788937409 16.8690967316568 7.17 171.672489082969 17.7827823302251 9.83 0 0 cat,chimp,dog,guinea_pig,horse,human,macaque,marmoset,orangutan,rabbit, antisense antisense A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0.00654,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000249553.1 ENST00000505921.1 chr5:146293770-146299069 4 443 4850 intronic 2.54 0 0,0,0 0 0,0,0 12.2799097065463 16.2556701030928 0 8.15349887133183 10.7546391752577 24.558 15.2234762979684 12.0113402061856 27.14 0 0 cat,chimp,cow,dog,guinea_pig,horse,human,macaque,marmoset,orangutan,panda,rabbit, sense_intronic sense_intronic A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000250343.1 ENST00000504297.1 chr5:146559767-146614422 3 860 53791 intergenic 0.65 0 0,0,0 1 0,0,0 0 1.70193898607574 0 0 2.73408190961313 12.583 0 3.45087468163819 12.836 1 1 chimp,human,macaque,marmoset,orangutan, antisense antisense A549@0.0128025,AG04450@0,BJ@0,GM12878@0,H1HESC@0.0325955,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0.747799, 0 0 0 0 ENSG00000248255.1 ENST00000506321.1 chr5:146939557-147041572 4 1916 100093 exonic 1.92 0 0,0,1 0 0,0,0 70.0057411273486 22.2344119968429 0 140.37108559499 28.0996173558591 5.396 140.370563674322 27.663662793602 5.261 0 0 chimp,dog,elephant,horse,human,macaque,marmoset,orangutan,panda,pig, lincRNA lincRNA A549@0.0132945,AG04450@0,BJ@0,GM12878@0.002766,H1HESC@19.9857,HELAS3@0,HEPG2@0.003052,HMEC@0,HSMM@0.0023745,HUVEC@0.0031,K562@0,MCF7@0.0042835,NHEK@0,NHLF@0.001005,SKNSHRA@0.0023675, 0 0 0 0 ENSG00000248362.1 ENST00000512300.1 chr5:147265649-147266441 1 792 0 intergenic -4.61 0 0,0,0 0 0,0,0 0 0 3.52 0 0 0 0 0 0 0 0 cat,chimp,elephant,horse,human,macaque,marmoset,orangutan, antisense antisense A549@0.003483,AG04450@0,BJ@0.115348,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0.0004095,HUVEC@0.002027,K562@0,MCF7@0,NHEK@0.00761433,NHLF@0,SKNSHRA@0.025653, 0 0 0 0 ENSG00000251320.1 ENST00000505162.1 chr5:147266675-147267267 1 592 0 intergenic -0.88 0 0,0,0 0 0,0,0 0 0 0 0 0 0 0 0 0 0 0 cat,chimp,cow,elephant,horse,human,macaque,marmoset,orangutan,panda,rabbit, antisense antisense A549@0,AG04450@0,BJ@0.024134,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0.0076655, 0 0 0 0 ENSG00000248109.1 ENST00000513133.1 chr5:147618133-147622157 2 224 3798 intergenic 0 0 0,0,0 0 0,0,0 0 0 0 74.3660714285714 0.59768299104792 51.515 106.736607142857 0.664033701948394 57.239 0 0 cat,chimp,cow,dog,elephant,guinea_pig,horse,human,macaque,marmoset,mouse,orangutan,panda,pig,rabbit,rat, lincRNA lincRNA A549@0.034048,AG04450@0,BJ@0,GM12878@0.20598,H1HESC@0,HELAS3@2.15204,HEPG2@0.072418,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000247199.3 ENST00000501695.3 chr5:147647870-147763346 5 2028 113440 exonic 0.54 0 0,1,1 1 0,0,0 0 1.75872708039492 0 18.0547337278106 3.37298131170663 48.231 20.5152859960552 4.62819111424542 48.2 0 1 chimp,human,orangutan, lincRNA processed_transcript A549@0.056877,AG04450@0.0740105,BJ@0.0192835,GM12878@0.098917,H1HESC@0.246318,HELAS3@0.100308,HEPG2@0.117821,HMEC@0.014099,HSMM@0.0202125,HUVEC@0.207209,K562@0.0379265,MCF7@0.016002,NHEK@0.158003,NHLF@0.048152,SKNSHRA@0.362718, 0 0 0 0 ENSG00000251330.2 ENST00000520980.1 chr5:147809722-147810370 2 512 134 intronic 0 0 0,0,0 0 0,0,0 0 0 0 0 0 0 1.8984375 0 2.187 0 1 chimp,human,macaque,orangutan, antisense antisense A549@0.012299,AG04450@0.0115145,BJ@0.0266925,GM12878@0.0242915,H1HESC@0.0057175,HELAS3@0.0381785,HEPG2@0.023787,HMEC@0,HSMM@0,HUVEC@0.0300485,K562@0.010865,MCF7@0.003417,NHEK@0.018649,NHLF@0,SKNSHRA@0.0453815, 0 0 0 0 ENSG00000253297.1 ENST00000517511.1 chr5:148024250-148025953 1 1703 0 intronic 0.42 0 0,1,0 0 0,0,0 0 0 0 10.8461538461538 0 10.802 14.1467997651204 0 13.932 0 0 cat,chimp,elephant,guinea_pig,horse,human,macaque,marmoset,orangutan,panda,rabbit, sense_intronic sense_intronic A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000250072.1 ENST00000515519.1 chr5:148442880-148451090 4 752 7452 intergenic 6.45 0 0,1,0 0 0,0,0 19.3909574468085 0 99.426 26.2952127659574 1.14761137949544 161.029 27.0585106382979 2.91237251744498 157.418 0 0 chimp,horse,human,macaque,marmoset,orangutan,rabbit, lincRNA processed_transcript A549@0.007017,AG04450@0.0157875,BJ@0.014116,GM12878@0,H1HESC@0.0272245,HELAS3@0.0215255,HEPG2@0.016473,HMEC@3.65423,HSMM@0.0047315,HUVEC@0.029941,K562@0.002384,MCF7@0.0092605,NHEK@1.64028,NHLF@0.0407845,SKNSHRA@0.062541, 0 0 0 0 ENSG00000250072.1 ENST00000509139.1 chr5:148443018-148489350 3 651 45677 intergenic 6.45 0 0,1,0 0 0,0,0 0 0 114.325 0 0.856229612277514 181.218 0 1.24894366968058 178.178 0 0 chimp,cow,dog,elephant,horse,human,macaque,marmoset,orangutan,panda, lincRNA processed_transcript A549@0.007017,AG04450@0.0157875,BJ@0.014116,GM12878@0,H1HESC@0.0272245,HELAS3@0.0215255,HEPG2@0.016473,HMEC@3.65423,HSMM@0.0047315,HUVEC@0.029941,K562@0.002384,MCF7@0.0092605,NHEK@1.64028,NHLF@0.0407845,SKNSHRA@0.062541, 0 0 0 0 ENSG00000250072.1 ENST00000515304.1 chr5:148443049-148443737 2 291 395 intergenic 6.45 0 0,1,0 0 0,0,0 0 0 114.325 0 0 181.218 0 0 178.178 0 0 chimp,cow,dog,elephant,horse,human,macaque,marmoset,mouse,orangutan,panda,rat, lincRNA processed_transcript A549@0.007017,AG04450@0.0157875,BJ@0.014116,GM12878@0,H1HESC@0.0272245,HELAS3@0.0215255,HEPG2@0.016473,HMEC@3.65423,HSMM@0.0047315,HUVEC@0.029941,K562@0.002384,MCF7@0.0092605,NHEK@1.64028,NHLF@0.0407845,SKNSHRA@0.062541, 0 0 0 0 ENSG00000250072.1 ENST00000507318.1 chr5:148443066-148446548 2 3089 391 intergenic 6.45 0 1,1,1 0 0,0,0 0 0 114.325 0.681126578180641 0 181.218 0.686306247976691 0 178.178 0 0 chimp,human,macaque,marmoset,orangutan,rabbit, lincRNA processed_transcript A549@0.007017,AG04450@0.0157875,BJ@0.014116,GM12878@0,H1HESC@0.0272245,HELAS3@0.0215255,HEPG2@0.016473,HMEC@3.65423,HSMM@0.0047315,HUVEC@0.029941,K562@0.002384,MCF7@0.0092605,NHEK@1.64028,NHLF@0.0407845,SKNSHRA@0.062541, 0 0 0 0 ENSG00000250072.1 ENST00000507373.1 chr5:148443172-148486701 2 435 43092 intergenic 3.52 0 0,1,0 0 0,0,0 0 0 100.702 11.1724137931034 0.794811101828646 164.463 11.5034482758621 1.20774157616263 161.166 1 1 chimp,human,macaque,marmoset,orangutan, lincRNA processed_transcript A549@0.007017,AG04450@0.0157875,BJ@0.014116,GM12878@0,H1HESC@0.0272245,HELAS3@0.0215255,HEPG2@0.016473,HMEC@3.65423,HSMM@0.0047315,HUVEC@0.029941,K562@0.002384,MCF7@0.0092605,NHEK@1.64028,NHLF@0.0407845,SKNSHRA@0.062541, 0 0 0 0 ENSG00000250072.1 ENST00000512007.1 chr5:148443836-148469015 2 243 24934 intergenic -5.28 0 0,0,0 0 0,0,0 0 0 28.847 0 1.37362637362637 32.769 0 2.08727039383974 31.839 0 1 human,macaque, lincRNA processed_transcript A549@0.007017,AG04450@0.0157875,BJ@0.014116,GM12878@0,H1HESC@0.0272245,HELAS3@0.0215255,HEPG2@0.016473,HMEC@3.65423,HSMM@0.0047315,HUVEC@0.029941,K562@0.002384,MCF7@0.0092605,NHEK@1.64028,NHLF@0.0407845,SKNSHRA@0.062541, 0 0 0 0 ENSG00000248647.2 ENST00000522685.1 chr5:148543518-148656339 2 385 112434 intronic -0.61 0 0,0,1 0 0,0,0 0 17.6324866143693 0 60.5844155844156 30.8798139352865 5.092 64.5012987012987 31.3897308643293 5.146 0 0 horse,human,panda, antisense antisense A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000248647.2 ENST00000512647.2 chr5:148554071-148656325 3 421 101829 intronic -3.65 0 0,0,0 0 0,0,0 0 17.3531214094217 0 62.8432304038005 31.0958174979623 5.092 57.4631828978622 31.3904585137829 5.146 0 0 cat,chimp,cow,dog,elephant,guinea_pig,horse,human,macaque,marmoset,orangutan,rabbit, antisense antisense A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000253406.1 ENST00000523176.1 chr5:148596086-148656368 2 4531 55749 exonic 4.83 0 0,0,0 0 0,0,0 9.13153829176782 23.2538700245744 0 33.9209887442066 37.2163267502556 5.092 37.0558375634518 37.2678433693878 5.146 1 1 chimp,human,macaque,marmoset,orangutan, antisense antisense A549@0,AG04450@0.031406,BJ@0.0028555,GM12878@0,H1HESC@0,HELAS3@0.004604,HEPG2@0.003878,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000253618.1 ENST00000521295.1 chr5:148727679-148737205 2 399 9125 exonic -4.60 0 0,0,1 0 0,0,0 107.508771929825 41.2346301369863 5.06 184.220551378446 46.9320547945205 40.248 160.614035087719 43.2531506849315 32.136 0 0 chimp,cow,elephant,guinea_pig,horse,human,macaque,marmoset,mouse,orangutan,rabbit,rat, antisense antisense A549@0,AG04450@0,BJ@0,GM12878@0.055943,H1HESC@0,HELAS3@0.0066185,HEPG2@0.0476165,HMEC@0,HSMM@0,HUVEC@0,K562@0.0128015,MCF7@0.0203955,NHEK@0,NHLF@0,SKNSHRA@0.0067075, 0 0 0 0 ENSG00000253865.1 ENST00000521756.1 chr5:148751737-148754679 2 586 2354 intronic 6.82 1 0,1,1 0 0,0,0 22.2901023890785 37.9490229396771 0 77.3105802047781 66.2557349192863 0 75.8361774744027 66.9553950722175 0 1 1 chimp,human,macaque,marmoset,orangutan, antisense antisense A549@0.035268,AG04450@0.026602,BJ@0.0207205,GM12878@0.0529535,H1HESC@0.466888,HELAS3@0.068583,HEPG2@0.049597,HMEC@0.041782,HSMM@0.013997,HUVEC@0.134689,K562@0.156144,MCF7@0.0853035,NHEK@0.0864113,NHLF@0,SKNSHRA@0.078422, 0 0 0 0 ENSG00000249669.2 ENST00000512096.1 chr5:148786252-148803960 4 551 17151 intergenic -0.39 0 0,0,1 0 0,0,0 56.3194192377495 16.5007871261151 60.385 159.569872958258 29.4103550813364 85.222 136.317604355717 26.7061395836977 92.365 0 0 cat,chimp,cow,dog,guinea_pig,horse,human,macaque,marmoset,mouse,orangutan,panda,pig,rabbit,rat, lincRNA processed_transcript A549@0.065925,AG04450@11.5321,BJ@17.1362,GM12878@0.183792,H1HESC@0.096125,HELAS3@0.146085,HEPG2@0.0894755,HMEC@0,HSMM@0.0061755,HUVEC@0.005373,K562@0.012882,MCF7@0.000653,NHEK@0.0226517,NHLF@6.37274,SKNSHRA@2.8212, 0 0 0 0 ENSG00000249669.2 ENST00000523269.1 chr5:148786441-148801189 3 408 14336 intergenic 0 0 0,1,1 1 0,0,0 0 14.8899274553571 105.673 174.28431372549 21.8839983258929 171.168 175.549019607843 18.1630161830357 170.163 0 0 chimp,dog,elephant,guinea_pig,horse,human,macaque,marmoset,orangutan,panda,pig,rat, lincRNA retained_intron A549@0.065925,AG04450@11.5321,BJ@17.1362,GM12878@0.183792,H1HESC@0.096125,HELAS3@0.146085,HEPG2@0.0894755,HMEC@0,HSMM@0.0061755,HUVEC@0.005373,K562@0.012882,MCF7@0.000653,NHEK@0.0226517,NHLF@6.37274,SKNSHRA@2.8212, 0 0 0 0 ENSG00000249669.2 ENST00000505254.1 chr5:148786441-148805957 5 3143 16365 intergenic 5.07 0 0,1,0 1 0,0,0 0.916321985364302 16.2960586617782 105.673 24.9904549793191 26.2194317140238 171.168 21.7833280305441 23.7100519401161 170.163 1 1 chimp,human,macaque,marmoset,orangutan, lincRNA processed_transcript A549@0.065925,AG04450@11.5321,BJ@17.1362,GM12878@0.183792,H1HESC@0.096125,HELAS3@0.146085,HEPG2@0.0894755,HMEC@0,HSMM@0.0061755,HUVEC@0.005373,K562@0.012882,MCF7@0.000653,NHEK@0.0226517,NHLF@6.37274,SKNSHRA@2.8212, 0 0 0 0 ENSG00000249669.2 ENST00000519898.1 chr5:148786479-148805225 4 1154 17586 intergenic 3.74 1 0,1,0 1 0,0,0 2.49566724436742 15.1646195837598 105.673 58.6542461005199 24.5077334243148 179.688 51.7279029462738 22.2296713294666 175.579 0 0 chimp,cow,horse,human,macaque,marmoset,orangutan, lincRNA processed_transcript A549@0.065925,AG04450@11.5321,BJ@17.1362,GM12878@0.183792,H1HESC@0.096125,HELAS3@0.146085,HEPG2@0.0894755,HMEC@0,HSMM@0.0061755,HUVEC@0.005373,K562@0.012882,MCF7@0.000653,NHEK@0.0226517,NHLF@6.37274,SKNSHRA@2.8212, 0 0 0 0 ENSG00000253864.1 ENST00000518014.1 chr5:148786526-148793660 2 5129 2003 intergenic 3.87 0 0,0,0 1 0,0,0 0 0 105.673 7.21485669721193 0 195.024 7.89471631897056 1.33449825262107 193.593 1 1 chimp,human,macaque,marmoset,orangutan, lincRNA processed_transcript A549@0.0052235,AG04450@2.27488,BJ@4.03709,GM12878@0.02483,H1HESC@0.0040285,HELAS3@0.004684,HEPG2@0.004503,HMEC@0,HSMM@6e-05,HUVEC@0,K562@0.002887,MCF7@0,NHEK@0,NHLF@0.50287,SKNSHRA@0.422362, 0 0 0 0 ENSG00000249669.2 ENST00000522358.1 chr5:148786526-148804027 3 609 16888 intergenic -0.39 0 0,0,1 1 0,0,0 4.72906403940887 15.7913903363335 105.673 86.6617405582923 25.5206655613453 195.024 68.6141215106732 23.148448602558 193.593 0 0 cat,chimp,cow,dog,guinea_pig,horse,human,macaque,marmoset,orangutan,panda,pig,rabbit, lincRNA retained_intron A549@0.065925,AG04450@11.5321,BJ@17.1362,GM12878@0.183792,H1HESC@0.096125,HELAS3@0.146085,HEPG2@0.0894755,HMEC@0,HSMM@0.0061755,HUVEC@0.005373,K562@0.012882,MCF7@0.000653,NHEK@0.0226517,NHLF@6.37274,SKNSHRA@2.8212, 0 0 0 0 ENSG00000249669.2 ENST00000505340.1 chr5:148786527-148800500 2 570 13401 intergenic 8.68 0 0,0,0 1 0,0,0 45.2842105263158 14.0026863666891 105.673 35.7859649122807 22.7752406536826 195.024 40.9140350877193 18.5529438101634 193.926 0 0 cat,chimp,cow,dog,elephant,guinea_pig,horse,human,macaque,marmoset,orangutan,panda,pig,rabbit, lincRNA processed_transcript A549@0.065925,AG04450@11.5321,BJ@17.1362,GM12878@0.183792,H1HESC@0.096125,HELAS3@0.146085,HEPG2@0.0894755,HMEC@0,HSMM@0.0061755,HUVEC@0.005373,K562@0.012882,MCF7@0.000653,NHEK@0.0226517,NHLF@6.37274,SKNSHRA@2.8212, 0 0 0 0 ENSG00000249669.2 ENST00000524265.1 chr5:148786527-148801504 2 574 14401 intergenic 5.76 0 0,0,0 1 0,0,0 0 14.8227206443997 105.673 213.479094076655 21.7852232483855 195.024 216.155052264808 18.081036039164 193.926 0 0 chimp,cow,dog,elephant,guinea_pig,horse,human,macaque,marmoset,mouse,orangutan,panda,pig, lincRNA retained_intron A549@0.065925,AG04450@11.5321,BJ@17.1362,GM12878@0.183792,H1HESC@0.096125,HELAS3@0.146085,HEPG2@0.0894755,HMEC@0,HSMM@0.0061755,HUVEC@0.005373,K562@0.012882,MCF7@0.000653,NHEK@0.0226517,NHLF@6.37274,SKNSHRA@2.8212, 0 0 0 0 ENSG00000249669.2 ENST00000509909.1 chr5:148786527-148803902 4 546 16823 intergenic -0.39 0 0,0,1 1 0,0,0 5.27472527472527 15.8524044462938 105.673 96.6611721611721 25.6192712358081 195.024 75.9212454212454 23.2378886048862 193.926 0 0 cat,chimp,cow,dog,guinea_pig,horse,human,macaque,marmoset,orangutan,panda, lincRNA processed_transcript A549@0.065925,AG04450@11.5321,BJ@17.1362,GM12878@0.183792,H1HESC@0.096125,HELAS3@0.146085,HEPG2@0.0894755,HMEC@0,HSMM@0.0061755,HUVEC@0.005373,K562@0.012882,MCF7@0.000653,NHEK@0.0226517,NHLF@6.37274,SKNSHRA@2.8212, 0 0 0 0 ENSG00000254333.1 ENST00000519040.1 chr5:149855094-149865531 3 365 10068 exonic 2.27 0 0,1,1 0 0,0,0 21.7424657534247 18.3262812872467 78.788 134.580821917808 21.4322606277314 243.592 78.627397260274 19.3082042113627 203.853 0 0 elephant,human,orangutan, lincRNA lincRNA A549@0.057908,AG04450@0.053251,BJ@0.031668,GM12878@0.0364335,H1HESC@0.0080755,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0.349541,HUVEC@0,K562@0.006674,MCF7@0.0166375,NHEK@0.0142157,NHLF@0.005302,SKNSHRA@0.15656, 0 0 0 0 ENSG00000253852.1 ENST00000517474.1 chr5:149987990-149994916 3 614 6308 intronic 0 0 0,0,1 0 0,0,0 134.514657980456 19.2948636651871 36.656 115.333876221498 13.7683893468611 59.807 114.270358306189 13.9410272669626 57.852 0 0 chimp,elephant,human,macaque,marmoset,panda, antisense antisense A549@0,AG04450@0,BJ@0.007844,GM12878@0.05585,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0.040532,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0.020875, 0 0 0 0 ENSG00000250309.2 ENST00000511626.2 chr5:150050220-150051952 2 423 1307 exonic -3.16 0 0,0,0 0 0,0,0 30.4964539007092 0 12.6 47.2505910165485 10.0382555470543 27.781 53.2056737588652 10.8523335883703 31.517 0 0 elephant,horse,human,macaque,marmoset,orangutan,panda, antisense antisense A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@1.46871,HELAS3@0,HEPG2@0.0513455,HMEC@0,HSMM@0,HUVEC@0.017163,K562@0.0054635,MCF7@0,NHEK@0.0153057,NHLF@0.004591,SKNSHRA@0.379346, 0 0 0 0 ENSG00000254298.1 ENST00000523781.1 chr5:150537667-150538023 2 246 108 intergenic 0 1 0,1,1 0 0,0,0 0 0 0 0 0 0 0 0 0 1 1 chimp,human,macaque,marmoset,orangutan, lincRNA lincRNA A549@0,AG04450@0.0639455,BJ@0.009758,GM12878@0.220628,H1HESC@0.0167295,HELAS3@0.100986,HEPG2@0.491918,HMEC@0,HSMM@0,HUVEC@0,K562@0.104962,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0.0091645, 0 0 0 0 ENSG00000249035.2 ENST00000510576.2 chr5:151056506-151067471 5 1968 8989 exonic -2.19 0 0,1,0 0 0,0,0 107.916666666667 10.9988875292024 45.952 72.2002032520325 17.9866503504283 67.099 71.1798780487805 17.9282456335521 71.839 0 0 cat,chimp,dog,elephant,horse,human,macaque,marmoset,orangutan,panda,pig, lincRNA processed_transcript A549@0,AG04450@0.0199055,BJ@0.0236555,GM12878@0.017487,H1HESC@0.014028,HELAS3@0,HEPG2@0.00513,HMEC@0,HSMM@0.016756,HUVEC@0.0178595,K562@0,MCF7@0,NHEK@0.00693367,NHLF@0.013274,SKNSHRA@0.023775, 0 0 0 0 ENSG00000249035.2 ENST00000518905.1 chr5:151056534-151104343 3 407 47398 exonic -5.02 0 0,1,0 0 0,0,0 86.1228501228501 10.5148107515085 45.952 88.2579852579853 11.1904088780117 68.055 90.3439803439803 15.6685303177349 72.927 0 0 cat,chimp,cow,dog,elephant,horse,human,macaque,marmoset,mouse,orangutan,panda,rabbit,rat, lincRNA processed_transcript A549@0,AG04450@0.0199055,BJ@0.0236555,GM12878@0.017487,H1HESC@0.014028,HELAS3@0,HEPG2@0.00513,HMEC@0,HSMM@0.016756,HUVEC@0.0178595,K562@0,MCF7@0,NHEK@0.00693367,NHLF@0.013274,SKNSHRA@0.023775, 0 0 0 0 ENSG00000253921.1 ENST00000518182.1 chr5:151133553-151146808 3 567 12684 intronic 1.82 0 0,0,1 0 0,0,0 0 13.1993062125512 0 0 5.58222958057395 4.207 12.8589065255732 62.2788552507096 4.339 0 0 chimp,cow,dog,horse,human,macaque,orangutan,panda,pig, antisense antisense A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000254226.1 ENST00000524295.1 chr5:151329132-151650009 7 3584 317281 intergenic -0.20 1 0,1,1 0 0,0,0 5.90401785714286 8.98874814438936 0 2.20452008928571 10.6001746086277 0 3.05524553571429 12.5729558341029 0 0 1 chimp,human,marmoset,orangutan, lincRNA lincRNA A549@0.025112,AG04450@0.0019355,BJ@0,GM12878@0.102345,H1HESC@0.0147765,HELAS3@0.007857,HEPG2@0.026604,HMEC@0.010262,HSMM@0.005713,HUVEC@0.000677,K562@0.0219075,MCF7@0.015056,NHEK@0.009222,NHLF@0.0005435,SKNSHRA@0.0069595, 0 0 0 0 ENSG00000254226.1 ENST00000524034.1 chr5:151338459-151650006 3 396 311147 intergenic 0 1 0,0,1 0 0,0,0 0 8.94766139477482 38.383 0 10.3399647112137 46.323 0.613636363636364 12.2996043670677 52.489 0 0 chimp,cow,dog,elephant,horse,human,macaque,marmoset,orangutan, lincRNA lincRNA A549@0.025112,AG04450@0.0019355,BJ@0,GM12878@0.102345,H1HESC@0.0147765,HELAS3@0.007857,HEPG2@0.026604,HMEC@0.010262,HSMM@0.005713,HUVEC@0.000677,K562@0.0219075,MCF7@0.015056,NHEK@0.009222,NHLF@0.0005435,SKNSHRA@0.0069595, 0 0 0 0 ENSG00000254226.1 ENST00000518431.1 chr5:151575009-151650006 3 422 74571 intergenic 0 1 0,0,1 0 0,0,0 0 14.1221386329807 41.86 0 14.8902120127127 27.172 0.575829383886256 19.6765632752679 23.994 0 0 chimp,cow,dog,elephant,horse,human,macaque,marmoset,orangutan,pig, lincRNA lincRNA A549@0.025112,AG04450@0.0019355,BJ@0,GM12878@0.102345,H1HESC@0.0147765,HELAS3@0.007857,HEPG2@0.026604,HMEC@0.010262,HSMM@0.005713,HUVEC@0.000677,K562@0.0219075,MCF7@0.015056,NHEK@0.009222,NHLF@0.0005435,SKNSHRA@0.0069595, 0 0 0 0 ENSG00000254226.1 ENST00000523605.1 chr5:151596635-151649993 4 459 52893 intergenic -2.50 1 0,0,1 0 0,0,0 0 18.8154576219916 0 0 17.7074092980168 0 0.529411764705882 24.0003970279621 0 0 0 chimp,dog,horse,human,macaque,marmoset,orangutan,panda, lincRNA lincRNA A549@0.025112,AG04450@0.0019355,BJ@0,GM12878@0.102345,H1HESC@0.0147765,HELAS3@0.007857,HEPG2@0.026604,HMEC@0.010262,HSMM@0.005713,HUVEC@0.000677,K562@0.0219075,MCF7@0.015056,NHEK@0.009222,NHLF@0.0005435,SKNSHRA@0.0069595, 0 0 0 0 ENSG00000249484.3 ENST00000506723.2 chr5:151998525-152069089 4 2189 68369 intergenic -3.35 0 0,1,1 0 0,0,0 4.37460027409776 13.1829776653162 0 5.05116491548652 13.9088329506063 9.203 5.39698492462311 15.0427386681098 19.361 0 0 cat,chimp,cow,dog,elephant,guinea_pig,horse,human,macaque,marmoset,orangutan,rabbit, lincRNA lincRNA A549@0.0036595,AG04450@0,BJ@0,GM12878@0,H1HESC@0.004142,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0.0010815,HUVEC@0,K562@0,MCF7@0,NHEK@0.00358067,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000249484.3 ENST00000522300.1 chr5:151998594-152351909 5 2103 351204 intergenic 1.05 0 0,0,0 0 0,0,0 4.55349500713267 6.99807234541748 22.54 2.95292439372325 7.0084509288049 17.88 3.10603899191631 8.43827519048758 23.709 0 0 cat,chimp,cow,dog,guinea_pig,horse,human,macaque,marmoset,orangutan,panda,rabbit, lincRNA lincRNA A549@0.0036595,AG04450@0,BJ@0,GM12878@0,H1HESC@0.004142,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0.0010815,HUVEC@0,K562@0,MCF7@0,NHEK@0.00358067,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000249484.3 ENST00000503048.1 chr5:152000065-152603103 4 592 602440 intergenic 1.05 0 0,0,0 0 0,0,0 16.1756756756757 7.10226910563707 0 33.1858108108108 7.77101454086714 0 33.9493243243243 9.02520748954253 0 0 0 cat,chimp,cow,dog,elephant,guinea_pig,horse,human,macaque,marmoset,mouse,orangutan,panda,pig,rabbit, lincRNA lincRNA A549@0.0036595,AG04450@0,BJ@0,GM12878@0,H1HESC@0.004142,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0.0010815,HUVEC@0,K562@0,MCF7@0,NHEK@0.00358067,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000249484.3 ENST00000511419.1 chr5:152264987-152351343 3 363 85989 intergenic 0 0 0,0,0 0 0,0,0 0 3.20373536149973 0 0 4.14491388433404 5.736 0 5.06120550302946 6.36 0 0 cat,chimp,cow,dog,elephant,horse,human,macaque,marmoset,orangutan,panda,pig,rabbit, lincRNA lincRNA A549@0.0036595,AG04450@0,BJ@0,GM12878@0,H1HESC@0.004142,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0.0010815,HUVEC@0,K562@0,MCF7@0,NHEK@0.00358067,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000251183.1 ENST00000509568.1 chr5:153266988-153278547 4 533 11020 intergenic 6.38 0 0,0,0 0 0,0,0 28.4803001876173 8.61597096188748 0 84.9324577861163 12.7746823956443 5.073 81.8761726078799 17.2413793103448 5.319 0 0 cat,chimp,cow,dog,elephant,horse,human,macaque,marmoset,orangutan,panda,rabbit, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0.0049855,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0.004225, 0 0 0 0 ENSG00000245275.2 ENST00000519727.1 chr5:153708997-153825379 4 392 115984 intronic -5.00 0 0,1,0 1 0,0,0 12.1301020408163 17.4418540488343 210.979 35.3341836734694 20.64085563526 384.241 35.1275510204082 30.0198130776659 408.1 0 1 chimp,human,marmoset,orangutan, lincRNA processed_transcript A549@0.383981,AG04450@0.189132,BJ@0.327769,GM12878@1.49827,H1HESC@0.524157,HELAS3@1.24977,HEPG2@0.687577,HMEC@0.0772,HSMM@0.109779,HUVEC@0.238391,K562@1.07251,MCF7@0.392238,NHEK@0.147672,NHLF@0.153454,SKNSHRA@0.378118, 0 0 0 0 ENSG00000245275.2 ENST00000524264.1 chr5:153771731-153825373 3 1036 52602 intronic -2.95 0 0,1,0 1 0,0,0 2.753861003861 14.3313752328809 212.881 10.3986486486486 15.1310786662104 384.691 10.3378378378378 19.6783012052774 407.505 0 0 chimp,cow,human,macaque,marmoset,orangutan,panda, lincRNA processed_transcript A549@0.383981,AG04450@0.189132,BJ@0.327769,GM12878@1.49827,H1HESC@0.524157,HELAS3@1.24977,HEPG2@0.687577,HMEC@0.0772,HSMM@0.109779,HUVEC@0.238391,K562@1.07251,MCF7@0.392238,NHEK@0.147672,NHLF@0.153454,SKNSHRA@0.378118, 0 0 0 0 ENSG00000245275.2 ENST00000501280.2 chr5:153815561-153825410 3 564 9281 intergenic -5.00 0 0,1,0 1 0,0,0 25.854609929078 5.65240814567396 201.152 52.7553191489362 5.55026398017455 368.338 52.4468085106383 11.1897424846461 392.29 0 0 chimp,cow,human,orangutan, lincRNA processed_transcript A549@0.383981,AG04450@0.189132,BJ@0.327769,GM12878@1.49827,H1HESC@0.524157,HELAS3@1.24977,HEPG2@0.687577,HMEC@0.0772,HSMM@0.109779,HUVEC@0.238391,K562@1.07251,MCF7@0.392238,NHEK@0.147672,NHLF@0.153454,SKNSHRA@0.378118, 0 0 0 0 ENSG00000245275.2 ENST00000522312.1 chr5:153822557-153825382 2 567 2256 intergenic -2.53 0 0,1,1 1 0,0,0 10.0634920634921 0 210.028 27.1428571428571 2.89627659574468 382.702 26.984126984127 3.07890070921986 406.57 0 1 chimp,human,marmoset,orangutan, lincRNA processed_transcript A549@0.383981,AG04450@0.189132,BJ@0.327769,GM12878@1.49827,H1HESC@0.524157,HELAS3@1.24977,HEPG2@0.687577,HMEC@0.0772,HSMM@0.109779,HUVEC@0.238391,K562@1.07251,MCF7@0.392238,NHEK@0.147672,NHLF@0.153454,SKNSHRA@0.378118, 1 96 0 0 ENSG00000254293.1 ENST00000518984.1 chr5:153863477-153865489 2 1732 278 intergenic 2.22 0 0,1,0 0 0,0,0 91.933025404157 0 437.994 64.074480369515 8.27338129496403 288.046 66.5282909930716 9.02877697841727 320.303 0 0 chimp,horse,human,macaque,marmoset,orangutan,pig, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0.001352,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0.0020155,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0.0673515, 0 0 0 0 ENSG00000254293.1 ENST00000522134.1 chr5:153864833-153865710 2 400 475 intergenic -4.47 0 0,0,0 0 0,0,0 202.8 215.444210526316 310.21 178.7725 122.989473684211 178.17 177.345 126.873684210526 211.55 0 0 cat,chimp,cow,dog,elephant,guinea_pig,horse,human,macaque,marmoset,mouse,orangutan,pig,rabbit, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0.001352,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0.0020155,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0.0673515, 0 0 0 0 ENSG00000254163.1 ENST00000520705.1 chr5:156131069-156166823 3 457 35293 intronic -0.38 0 0,0,0 0 0,0,0 0 5.69478366814949 0 0 9.48879381180404 0 3.19037199124726 11.052304989658 0 0 0 chimp,horse,human,marmoset,orangutan, antisense antisense A549@0.004719,AG04450@0,BJ@0,GM12878@0.128683,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000254246.1 ENST00000517708.1 chr5:156531799-156541911 2 273 9837 intronic -0.06 0 0,0,0 0 0,0,0 0 0.559113550879333 0 4.14652014652015 7.17068211853207 11.576 4.16117216117216 8.96879129816001 13.38 0 0 chimp,dog,elephant,horse,human,macaque,orangutan, antisense antisense A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000253980.1 ENST00000519375.1 chr5:156626253-156651390 2 567 24568 intronic -2.41 0 0,0,0 0 0,0,0 0 8.32119016606968 0 0 15.2689270595897 3.107 0 16.3465890589385 3.367 0 0 cat,chimp,cow,dog,guinea_pig,horse,human,macaque,marmoset,orangutan,panda,rabbit, antisense antisense A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000253653.1 ENST00000517634.1 chr5:156687132-156693635 3 908 5591 exonic 13.45 0 0,1,0 0 0,0,0 20.7213656387665 1.41065998926847 0 23.8447136563877 11.9731711679485 14.357 24.0099118942731 14.7553210516902 22.371 0 1 chimp,human,macaque,orangutan, antisense antisense A549@0,AG04450@0,BJ@0,GM12878@0.0179865,H1HESC@0.0068315,HELAS3@0.005131,HEPG2@0,HMEC@0,HSMM@0.029605,HUVEC@0,K562@0,MCF7@0.0944895,NHEK@0,NHLF@0.0042835,SKNSHRA@0.0382645, 0 0 0 0 ENSG00000251405.2 ENST00000519499.1 chr5:156789623-156887086 3 738 96721 exonic 0.91 0 0,0,0 0 0,0,0 0 6.38298818250432 12.336 3.73983739837398 8.62596540565131 36.635 7.35772357723577 13.3474012882414 36.274 0 0 chimp,dog,horse,human,macaque,marmoset,orangutan,panda, processed_transcript processed_transcript A549@0.194621,AG04450@0.152962,BJ@0.138276,GM12878@0.0994045,H1HESC@0.033792,HELAS3@0.0016655,HEPG2@0.002836,HMEC@0,HSMM@0.11304,HUVEC@0.205337,K562@0,MCF7@0.0015,NHEK@0.00766133,NHLF@0.024866,SKNSHRA@0.247055, 0 0 0 0 ENSG00000251405.2 ENST00000509655.2 chr5:156790390-156792509 2 1990 127 intronic 2.94 1 0,0,0 0 0,0,0 0 0 0 4.09547738693467 0 0 11.5778894472362 9.88188976377953 0 0 0 chimp,cow,human,macaque,marmoset,orangutan, processed_transcript processed_transcript A549@0.194621,AG04450@0.152962,BJ@0.138276,GM12878@0.0994045,H1HESC@0.033792,HELAS3@0.0016655,HEPG2@0.002836,HMEC@0,HSMM@0.11304,HUVEC@0.205337,K562@0,MCF7@0.0015,NHEK@0.00766133,NHLF@0.024866,SKNSHRA@0.247055, 0 0 0 0 ENSG00000248544.2 ENST00000508443.1 chr5:156802749-156811947 2 1930 7266 exonic 1.66 0 0,0,0 0 0,0,0 0 11.5441783649876 22.673 0 14.0970272502064 32.796 0 16.8486099642169 37.101 0 1 chimp,human, antisense antisense A549@0.105313,AG04450@0.119723,BJ@0.127121,GM12878@0.0920595,H1HESC@0.0474495,HELAS3@0.0025995,HEPG2@0.00723,HMEC@0,HSMM@0.0672125,HUVEC@0.198464,K562@0,MCF7@0.0716515,NHEK@0.0162023,NHLF@0.0089215,SKNSHRA@0.275772, 0 0 0 0 ENSG00000248544.2 ENST00000520658.1 chr5:156807022-156811958 3 542 4390 exonic -18.84 0 0,0,0 0 0,0,0 0 19.1070615034169 22.673 0 21.9970387243736 32.796 0 26.5070615034169 37.101 1 1 chimp,human,macaque,marmoset,orangutan, antisense antisense A549@0.105313,AG04450@0.119723,BJ@0.127121,GM12878@0.0920595,H1HESC@0.0474495,HELAS3@0.0025995,HEPG2@0.00723,HMEC@0,HSMM@0.0672125,HUVEC@0.198464,K562@0,MCF7@0.0716515,NHEK@0.0162023,NHLF@0.0089215,SKNSHRA@0.275772, 1 96 0 0 ENSG00000253519.1 ENST00000518054.1 chr5:156992972-156996106 2 1843 1289 intronic -1.23 0 0,0,0 0 0,0,0 27.2295170916983 11.9472459270753 0 34.5105805751492 3.02249806051202 0 27.9761258817146 1.72536850271528 0 0 0 chimp,human,marmoset,mouse,orangutan, antisense antisense A549@0.002353,AG04450@0.002553,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0.0033455,HUVEC@0,K562@0,MCF7@0,NHEK@0.000714,NHLF@0.010552,SKNSHRA@0, 0 0 0 0 ENSG00000253798.1 ENST00000522076.1 chr5:157109993-157117274 2 426 6853 intergenic 1.13 0 0,0,0 0 0,0,0 0 0 0 300.115023474178 4.04888370056909 73.58 287.633802816901 41.6535823726835 142.899 0 0 cat,chimp,cow,dog,elephant,guinea_pig,horse,human,macaque,marmoset,mouse,orangutan,panda,pig,rabbit,rat, antisense antisense A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0.0062555,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0.0106205, 0 0 0 0 ENSG00000253792.1 ENST00000522769.1 chr5:157600609-157603430 2 312 2507 intergenic 1.21 0 0,0,0 0 0,0,0 93.5641025641026 50.8835261268448 0 91.1025641025641 33.6043079377742 8.928 83.8653846153846 32.8500199441564 6.697 0 0 cat,chimp,cow,elephant,horse,human,macaque,marmoset,orangutan,rabbit, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0.025513,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000253673.1 ENST00000522975.1 chr5:157602404-157627024 2 679 23939 intergenic -0.38 0 0,0,0 0 0,0,0 8.32695139911635 24.8253477588872 13.5 4.87776141384389 37.7830318726764 33.179 9.36671575846833 56.1440745227453 32.181 0 0 cat,chimp,dog,human,macaque,marmoset,orangutan,pig,rabbit, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000253449.1 ENST00000523178.1 chr5:157652360-157661384 5 766 8250 intergenic 1.61 0 0,0,1 0 0,0,0 103.049608355091 17.4012121212121 62.172 131.985639686684 20.3626666666667 117.359 131.238903394256 20.1826666666667 117.689 0 0 chimp,elephant,horse,human,macaque,marmoset,mouse,orangutan,panda,pig, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0.0956605,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0.857765,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000253424.1 ENST00000518103.1 chr5:157683145-157685444 2 546 1751 intergenic -2.58 0 0,0,0 0 0,0,0 0 0 0 0 0 3.964 0 2.43689320388349 8.503 0 0 cat,chimp,cow,elephant,guinea_pig,human,macaque,marmoset,orangutan,panda,pig,rat, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0.0106215,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000253134.1 ENST00000523820.1 chr5:157702719-157705821 2 344 2756 intergenic 4.22 0 0,0,0 0 0,0,0 0 84.9521044992743 0 0 117.503628447025 1.434 0 102.683599419448 1.458 1 1 chimp,human,macaque,marmoset,orangutan, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0.015476,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000254350.1 ENST00000517595.1 chr5:157851593-157879766 2 704 27467 intergenic -5.84 0 0,1,0 0 0,0,0 0 20.5481486875159 282.396 30.3494318181818 20.466268613245 303.903 48.5568181818182 23.4786835111224 281.4 0 0 cat,chimp,cow,dog,elephant,horse,human,macaque,marmoset,mouse,opossum,orangutan,panda,pig,rabbit,rat, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0.0028555,H1HESC@0,HELAS3@0,HEPG2@0.0061635,HMEC@0,HSMM@0.0029145,HUVEC@0,K562@0,MCF7@0,NHEK@0.00374,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000254135.1 ENST00000522704.1 chr5:157912198-157930400 3 688 17510 intergenic -0.62 0 0,0,0 0 0,0,0 315.593023255814 83.7750999428898 363.984 179.713662790698 80.4316390633923 343.972 177.49273255814 77.075042832667 335.716 0 0 cat,chimp,cow,dog,elephant,guinea_pig,horse,human,macaque,marmoset,orangutan,panda,pig,rabbit, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000254135.1 ENST00000519609.1 chr5:157912308-157961446 2 358 48778 intergenic 0 0 0,0,1 0 0,0,0 99.7374301675978 60.4631186190496 397.438 80.4664804469274 63.3386567714954 373.719 106.055865921788 62.3415884210095 372.814 0 0 cat,chimp,cow,dog,elephant,guinea_pig,horse,human,macaque,marmoset,mouse,orangutan,panda,pig,rabbit,rat, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000253811.1 ENST00000522582.1 chr5:158410014-158411797 3 560 1219 intronic 1.29 0 0,0,0 0 0,0,0 25.8714285714286 22.4881050041017 56.916 108.705357142857 47.4118129614438 21.605 137.701785714286 61.5168170631665 27.49 0 0 cat,chimp,cow,dog,elephant,guinea_pig,horse,human,marmoset,mouse,opossum,orangutan,panda,pig,rabbit,rat, antisense antisense A549@0,AG04450@0,BJ@0,GM12878@0.0047165,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000253456.1 ENST00000518425.1 chr5:158412814-158414207 3 539 850 intronic -4.39 0 0,1,0 0 0,0,0 0 17.5058823529412 0 0 77.7458823529412 5.998 5.4100185528757 81.5741176470588 10.419 0 0 cat,chimp,dog,horse,human,macaque,marmoset,orangutan,pig, antisense antisense A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000245812.2 ENST00000517335.1 chr5:158527491-158542331 3 688 14148 intergenic -1.94 0 0,1,0 0 0,0,0 244.578488372093 30.1887899349731 385.756 92.6293604651163 20.602063895957 523.736 100.103197674419 21.5747102063896 508.404 0 0 cat,chimp,guinea_pig,horse,human,macaque,marmoset,orangutan,panda,rabbit,rat, lincRNA processed_transcript A549@0.119427,AG04450@0.006421,BJ@0.104631,GM12878@0.447184,H1HESC@0,HELAS3@0,HEPG2@0.001024,HMEC@0,HSMM@0.0089215,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0.519956,SKNSHRA@0.032828, 0 0 0 0 ENSG00000245812.2 ENST00000523301.1 chr5:158527630-158534225 2 566 6027 intergenic -0.18 0 0,1,1 0 0,0,0 192.268551236749 53.9744483159117 422.414 91.5159010600707 33.732868757259 487.474 110.098939929329 33.7169404347105 460.096 0 0 chimp,cow,dog,elephant,guinea_pig,horse,human,macaque,marmoset,mouse,orangutan,panda,pig,rabbit, lincRNA processed_transcript A549@0.119427,AG04450@0.006421,BJ@0.104631,GM12878@0.447184,H1HESC@0,HELAS3@0,HEPG2@0.001024,HMEC@0,HSMM@0.0089215,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0.519956,SKNSHRA@0.032828, 0 0 0 0 ENSG00000245812.2 ENST00000499583.1 chr5:158527690-158544486 3 2661 14131 intergenic 1.08 0 0,1,0 0 0,0,0 66.0879368658399 30.2251079187602 417.014 76.4197670048854 20.626848772203 453.994 80.1055993987223 21.6006652041611 436.55 1 1 chimp,human,macaque,marmoset,orangutan, lincRNA processed_transcript A549@0.119427,AG04450@0.006421,BJ@0.104631,GM12878@0.447184,H1HESC@0,HELAS3@0,HEPG2@0.001024,HMEC@0,HSMM@0.0089215,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0.519956,SKNSHRA@0.032828, 0 0 0 0 ENSG00000253256.1 ENST00000521204.1 chr5:158636929-158675804 3 635 38236 exonic -9.77 0 0,1,0 0 0,0,0 0 3.36000104613453 52.076 0 2.28962234543362 124.328 4.59212598425197 4.03376399204938 127.82 0 0 chimp,cow,dog,elephant,guinea_pig,horse,human,macaque,marmoset,mouse,opossum,orangutan,pig,rabbit,rat, antisense antisense A549@0,AG04450@0,BJ@0,GM12878@0.003674,H1HESC@0,HELAS3@0.0035415,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0.0216637,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000253315.1 ENST00000520323.1 chr5:158654723-158672135 3 570 16838 intergenic -8.60 0 0,1,0 0 0,0,0 23.9 0 0 0 1.03319871718731 0 0 1.96490081957477 0 0 0 cat,chimp,cow,dog,elephant,guinea_pig,horse,human,macaque,marmoset,mouse,orangutan,panda,pig,platypus,rabbit,rat, lincRNA lincRNA A549@0.0151525,AG04450@0.0039115,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0.092897,HSMM@0.003591,HUVEC@0,K562@0.004052,MCF7@0,NHEK@0.082952,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000249738.2 ENST00000521472.1 chr5:158737941-158760011 4 628 21436 intronic -2.02 0 0,0,0 0 0,0,0 0 10.7673073334577 0 20.3216560509554 24.1338869192014 25.927 23.5270700636943 25.82347452883 29.72 0 0 chimp,cow,horse,human,macaque,marmoset, lincRNA processed_transcript A549@0.148616,AG04450@0.00495,BJ@0.0030895,GM12878@0.14235,H1HESC@0.0351275,HELAS3@0.012836,HEPG2@0,HMEC@0.015549,HSMM@0.001443,HUVEC@0,K562@0.003109,MCF7@0,NHEK@0.0238773,NHLF@0.0036775,SKNSHRA@0.0157255, 0 0 0 0 ENSG00000249738.2 ENST00000515337.1 chr5:158758526-158789842 5 1575 29733 intergenic -2.67 0 0,1,1 0 0,0,0 32.7606349206349 3.27266000739919 60.562 20.8622222222222 4.72320317492349 88.95 27.6996825396825 6.01446204553863 417.846 0 0 chimp,horse,human,macaque,marmoset,orangutan, lincRNA processed_transcript A549@0.148616,AG04450@0.00495,BJ@0.0030895,GM12878@0.14235,H1HESC@0.0351275,HELAS3@0.012836,HEPG2@0,HMEC@0.015549,HSMM@0.001443,HUVEC@0,K562@0.003109,MCF7@0,NHEK@0.0238773,NHLF@0.0036775,SKNSHRA@0.0157255, 0 0 0 0 ENSG00000253298.1 ENST00000518418.1 chr5:158875564-158893284 7 2005 15703 intergenic 0.03 1 0,0,1 0 0,0,0 0 17.6359931223333 0 1.8927680798005 18.6757307520856 0 1.94114713216958 21.009998089537 0 0 0 chimp,horse,human,macaque,marmoset,orangutan, lincRNA lincRNA A549@0.001676,AG04450@0,BJ@0,GM12878@0.0181255,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000254199.1 ENST00000523311.1 chr5:159175240-159188068 4 555 12267 intergenic -6.00 0 0,0,0 0 0,0,0 0 14.5071329583435 0 0 13.899812505095 53.258 0 16.4121627129698 58.325 0 0 cat,chimp,cow,dog,elephant,guinea_pig,horse,human,macaque,marmoset,orangutan, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000253311.1 ENST00000522627.1 chr5:159203779-159298391 3 5604 89004 intergenic 1.91 0 0,0,0 0 0,0,0 20.6365096359743 11.4064424070828 0 30.2078872234119 17.3878140308301 3.468 29.6779086366881 18.3511864635297 3.54 0 0 chimp,cow,dog,human,macaque,orangutan, lincRNA lincRNA A549@0.0148075,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0.0004735,HEPG2@0,HMEC@0,HSMM@0.002936,HUVEC@0,K562@0,MCF7@0,NHEK@0.0130003,NHLF@0,SKNSHRA@0.001919, 0 0 0 0 ENSG00000247699.2 ENST00000524005.1 chr5:159622751-159626102 2 459 2890 exonic 3.34 0 0,0,1 0 0,0,0 0 0 0 0 2.6439446366782 5.695 0 2.7560553633218 5.661 1 1 chimp,human,macaque,marmoset,orangutan, antisense antisense A549@0.000808,AG04450@0,BJ@0,GM12878@0.004229,H1HESC@0.0227495,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0.0066975,K562@0.010389,MCF7@0,NHEK@0.009439,NHLF@0,SKNSHRA@0.004229, 0 0 0 0 ENSG00000247699.2 ENST00000501818.1 chr5:159623598-159631833 2 2684 5549 exonic 0.41 0 0,0,0 0 0,0,0 0 0 0 2.84687034277198 2.12921247071544 0 2.96758569299553 2.16633627680663 4.235 0 0 cat,chimp,dog,human,macaque,marmoset,orangutan,panda, antisense antisense A549@0.000808,AG04450@0,BJ@0,GM12878@0.004229,H1HESC@0.0227495,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0.0066975,K562@0.010389,MCF7@0,NHEK@0.009439,NHLF@0,SKNSHRA@0.004229, 0 0 0 0 ENSG00000253522.1 ENST00000517927.1 chr5:159895275-159914433 2 2299 16857 intergenic -1.74 1 1,1,1 0 0,0,0 29.6628969117007 14.0137628284985 139.012 35.6907351022184 17.6125645132586 153.702 43.471944323619 22.6176662514089 163.707 0 0 chimp,cow,guinea_pig,horse,human,macaque,marmoset,orangutan, lincRNA lincRNA A549@0.0285325,AG04450@0.027976,BJ@0.013197,GM12878@71.8251,H1HESC@0.0622145,HELAS3@0.157821,HEPG2@3.34645,HMEC@0.003559,HSMM@0,HUVEC@0.697945,K562@0.0033195,MCF7@0.0008735,NHEK@0.00514467,NHLF@0.004221,SKNSHRA@0.0635925, 0 0 0 0 ENSG00000253687.1 ENST00000523598.1 chr5:160040880-160066190 2 729 24579 intronic -6.00 0 0,0,0 0 0,0,0 99.0850480109739 32.8601244965214 73.918 70.8971193415638 30.1421538711909 50.902 60.8518518518518 29.8665934334188 48.587 0 0 cat,chimp,cow,dog,elephant,guinea_pig,horse,human,marmoset,mouse,opossum,orangutan,panda,rabbit, antisense antisense A549@0,AG04450@0,BJ@0,GM12878@0.359468,H1HESC@0.0243925,HELAS3@0,HEPG2@0.017858,HMEC@0,HSMM@0,HUVEC@0.042858,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000254391.1 ENST00000524198.1 chr5:160112358-160119896 4 454 7078 intronic -2.06 0 0,0,0 0 0,0,0 0 11.838372421588 93.916 29.0528634361233 30.0645662616558 101.485 30.1167400881057 35.4998587171517 134.454 0 0 chimp,human,macaque,marmoset,pig, antisense antisense A549@0,AG04450@0,BJ@0,GM12878@0.0363765,H1HESC@0.0108055,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000253417.1 ENST00000518580.1 chr5:160358785-160365633 3 2320 4524 intergenic 5.82 1 1,1,1 0 0,0,0 0 0 0 0 0 0 0 0 0 1 1 chimp,human,macaque,marmoset,orangutan, lincRNA lincRNA A549@0.0010115,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0.00389,HEPG2@0.0019855,HMEC@0.080137,HSMM@0.0074355,HUVEC@0,K562@0,MCF7@0.0028745,NHEK@0.293184,NHLF@0,SKNSHRA@0.0058745, 0 0 0 0 ENSG00000253417.1 ENST00000518301.1 chr5:160358788-160365633 3 2143 4698 intergenic 5.82 1 1,1,1 0 0,0,0 0 0 0 0 0 0 0 0 0 1 1 chimp,human,macaque,marmoset,orangutan, lincRNA lincRNA A549@0.0010115,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0.00389,HEPG2@0.0019855,HMEC@0.080137,HSMM@0.0074355,HUVEC@0,K562@0,MCF7@0.0028745,NHEK@0.293184,NHLF@0,SKNSHRA@0.0058745, 0 0 0 0 ENSG00000253403.1 ENST00000521984.1 chr5:161114353-161116414 2 447 1612 exonic 0.78 0 0,0,0 0 0,0,0 125.545861297539 66.9590570719603 133.383 160.427293064877 88.0831265508685 204.404 131.868008948546 87.8095533498759 201.512 0 0 chimp,cow,dog,elephant,guinea_pig,horse,human,macaque,marmoset,mouse,opossum,orangutan,panda,pig,platypus,rabbit, antisense antisense A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000254173.1 ENST00000522274.1 chr5:161851384-161854351 2 598 2367 intergenic 0 0 0,0,0 0 0,0,0 0 0 0 3.59698996655518 5.64385297845374 0 3.77759197324415 8.79129700042247 0 0 0 cat,chimp,cow,dog,horse,human,macaque,marmoset,orangutan,panda,rabbit, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0.133998,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000254186.1 ENST00000517722.1 chr5:161985691-162050467 4 732 64038 intergenic 1.24 0 0,0,0 0 0,0,0 0 2.86723507917174 21.576 0 3.01402292388894 1.84 0 4.34954245916487 7.949 0 0 chimp,elephant,horse,human,macaque,marmoset,orangutan, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@1.03276,H1HESC@0.091483,HELAS3@0,HEPG2@0.0057895,HMEC@0,HSMM@0,HUVEC@0,K562@0.0036375,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0.071171, 0 0 0 0 ENSG00000250061.1 ENST00000458002.2 chr5:162439271-162864299 5 443 424577 intergenic -19.75 0 0,1,1 1 0,0,0 16.0948081264108 7.42378414280566 16.728 18.0993227990971 9.30521201101331 55.12 24.1896162528217 12.1423558035409 51.847 0 0 chimp,guinea_pig,horse,human,macaque,marmoset,orangutan,pig,rabbit, antisense antisense A549@0.072258,AG04450@0.0047865,BJ@0.0102735,GM12878@0.07256,H1HESC@0.34524,HELAS3@0.065114,HEPG2@0.0657555,HMEC@0.024967,HSMM@0.0101765,HUVEC@0.0071035,K562@0.409838,MCF7@0,NHEK@0.0127023,NHLF@0.0043555,SKNSHRA@0.186302, 0 0 0 0 ENSG00000250061.1 ENST00000509211.1 chr5:162465069-162683973 3 627 218273 intergenic 1.07 0 0,0,0 0 0,0,0 11.3716108452951 6.92052154870277 11.96 4.96491228070175 8.60538866465389 4.59 6.4066985645933 10.4844941884704 5.396 0 0 cat,chimp,cow,dog,elephant,guinea_pig,horse,human,macaque,marmoset,orangutan,pig,rabbit, antisense antisense A549@0.072258,AG04450@0.0047865,BJ@0.0102735,GM12878@0.07256,H1HESC@0.34524,HELAS3@0.065114,HEPG2@0.0657555,HMEC@0.024967,HSMM@0.0101765,HUVEC@0.0071035,K562@0.409838,MCF7@0,NHEK@0.0127023,NHLF@0.0043555,SKNSHRA@0.186302, 0 0 0 0 ENSG00000250061.1 ENST00000503615.1 chr5:162683077-162683993 2 335 579 intergenic 0 0 0,0,0 0 0,0,0 0 187.12780656304 11.96 34.4149253731343 47.5509499136442 4.59 44.4835820895522 60.7823834196891 5.396 0 0 cat,chimp,cow,dog,elephant,guinea_pig,horse,human,macaque,marmoset,mouse,orangutan,panda,pig,rat, antisense antisense A549@0.072258,AG04450@0.0047865,BJ@0.0102735,GM12878@0.07256,H1HESC@0.34524,HELAS3@0.065114,HEPG2@0.0657555,HMEC@0.024967,HSMM@0.0101765,HUVEC@0.0071035,K562@0.409838,MCF7@0,NHEK@0.0127023,NHLF@0.0043555,SKNSHRA@0.186302, 0 0 0 0 ENSG00000250061.1 ENST00000503504.1 chr5:162683857-162864332 4 488 179981 intergenic -25.75 0 0,1,0 1 0,0,0 0 8.69777921002772 16.728 10.0512295081967 10.8774648435113 55.12 13.7274590163934 15.0888871603114 51.847 0 0 cat,chimp,cow,dog,guinea_pig,horse,human,macaque,marmoset,mouse,orangutan, antisense antisense A549@0.072258,AG04450@0.0047865,BJ@0.0102735,GM12878@0.07256,H1HESC@0.34524,HELAS3@0.065114,HEPG2@0.0657555,HMEC@0.024967,HSMM@0.0101765,HUVEC@0.0071035,K562@0.409838,MCF7@0,NHEK@0.0127023,NHLF@0.0043555,SKNSHRA@0.186302, 0 0 0 0 ENSG00000251018.2 ENST00000521666.1 chr5:162910071-162921040 2 798 10169 exonic -5.24 0 0,0,0 0 0,0,0 65.4185463659148 15.0715901268561 80.1 68.9586466165414 22.5526600452355 80.1 143.823308270677 24.4276723374963 85.707 0 1 chimp,human,marmoset,orangutan, antisense antisense A549@0,AG04450@0,BJ@0.0089445,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000251018.2 ENST00000514724.2 chr5:162910182-162921064 4 693 10183 exonic 0.14 0 0,0,0 0 0,0,0 50.6493506493507 15.0508690955514 72.9 52.98556998557 22.5216537366199 72.9 50.7272727272727 24.3940881861927 78.003 0 1 chimp,human,marmoset,orangutan, antisense antisense A549@0,AG04450@0,BJ@0.0089445,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000253331.1 ENST00000521805.1 chr5:163546104-163661103 5 669 114322 intergenic 5.63 0 0,0,0 0 0,0,0 0 22.3784485925719 103.73 15.8026905829596 25.7866027536257 12.504 9.37817638266069 27.2113591434719 29.955 0 1 chimp,human,marmoset,orangutan, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0.020936,H1HESC@0,HELAS3@0.0069355,HEPG2@0,HMEC@0,HSMM@0.003382,HUVEC@0,K562@0,MCF7@0.0364365,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000253538.1 ENST00000522426.1 chr5:163636637-163638898 2 387 1872 intergenic -8.12 0 0,0,0 0 0,0,0 143.599483204134 84.0625 0 18.7286821705426 100.159722222222 0 65 94.6971153846154 0 0 0 cat,chimp,cow,dog,elephant,guinea_pig,horse,human,macaque,marmoset,orangutan,panda,pig,rabbit, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0.020648,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000241956.4 ENST00000517508.1 chr5:163723702-164192411 6 798 467901 encompassing 2.12 0 0,0,0 0 0,0,0 205.011278195489 24.946356173635 23.548 152.665413533835 26.4964597211804 59.554 187.392230576441 29.5326447261279 58.149 0 0 chimp,cow,dog,elephant,guinea_pig,human,macaque,marmoset,mouse,opossum,orangutan,panda,pig,rabbit,rat, antisense antisense A549@0,AG04450@0.0891875,BJ@0,GM12878@0.161822,H1HESC@0.18582,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0.155926,K562@0.571398,MCF7@0,NHEK@0,NHLF@0.0139585,SKNSHRA@0.109813, 0 0 0 0 ENSG00000241956.4 ENST00000523648.1 chr5:163723924-163920118 4 744 195444 encompassing -2.14 0 0,1,0 0 0,0,0 252.858870967742 20.8339012709523 120.784 91.8225806451613 23.5870274861341 112.76 107.231182795699 27.4019361044596 127.575 0 0 cat,chimp,dog,elephant,guinea_pig,human,macaque,marmoset,opossum,orangutan,pig,rabbit, antisense antisense A549@0,AG04450@0.0891875,BJ@0,GM12878@0.161822,H1HESC@0.18582,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0.155926,K562@0.571398,MCF7@0,NHEK@0,NHLF@0.0139585,SKNSHRA@0.109813, 0 0 0 0 ENSG00000241956.4 ENST00000524297.1 chr5:163723975-163970368 5 1078 245307 encompassing 3.04 1 0,1,0 0 0,0,0 59.030612244898 25.6136840775029 123.702 53.6530612244898 27.4717924885959 122.84 62.1632653061225 30.9442209150167 139.875 0 0 cat,chimp,cow,dog,elephant,guinea_pig,horse,human,macaque,marmoset,mouse,opossum,orangutan,panda,pig,platypus,rabbit,rat, antisense antisense A549@0,AG04450@0.0891875,BJ@0,GM12878@0.161822,H1HESC@0.18582,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0.155926,K562@0.571398,MCF7@0,NHEK@0,NHLF@0.0139585,SKNSHRA@0.109813, 0 0 0 0 ENSG00000241956.4 ENST00000519570.1 chr5:163723984-164598649 6 711 873944 encompassing 0 0 0,1,0 0 0,0,0 86.3614627285513 24.6240685902071 125.934 77.9029535864979 26.085108428 126.422 90.5330520393812 28.3459901320908 144.087 0 0 cat,chimp,cow,dog,elephant,guinea_pig,horse,human,macaque,marmoset,mouse,opossum,orangutan,panda,pig,platypus,rabbit,rat, antisense antisense A549@0,AG04450@0.0891875,BJ@0,GM12878@0.161822,H1HESC@0.18582,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0.155926,K562@0.571398,MCF7@0,NHEK@0,NHLF@0.0139585,SKNSHRA@0.109813, 0 0 0 0 ENSG00000241956.4 ENST00000523704.1 chr5:163723990-164149813 4 404 425413 encompassing -0.35 0 0,1,0 0 0,0,0 148.304455445545 25.2960863913421 127.422 129.141089108911 26.9639550272324 128.81 149.319306930693 30.0046989631253 146.895 0 0 chimp,cow,dog,elephant,guinea_pig,horse,human,macaque,marmoset,mouse,opossum,orangutan,pig,platypus,rabbit,rat, antisense antisense A549@0,AG04450@0.0891875,BJ@0,GM12878@0.161822,H1HESC@0.18582,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0.155926,K562@0.571398,MCF7@0,NHEK@0,NHLF@0.0139585,SKNSHRA@0.109813, 0 0 0 0 ENSG00000241956.4 ENST00000522686.1 chr5:163723992-163981931 6 768 257161 encompassing -5.54 0 0,1,0 0 0,0,0 77.3684895833333 24.8616547610252 127.918 66.5 26.7889298921687 129.606 76.8958333333333 30.2344290152861 147.831 0 0 chimp,guinea_pig,human,macaque,marmoset,mouse,orangutan, antisense antisense A549@0,AG04450@0.0891875,BJ@0,GM12878@0.161822,H1HESC@0.18582,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0.155926,K562@0.571398,MCF7@0,NHEK@0,NHLF@0.0139585,SKNSHRA@0.109813, 0 0 0 0 ENSG00000241956.4 ENST00000522303.1 chr5:163724068-164598619 5 521 874022 encompassing -0.35 0 0,0,0 0 0,0,0 97.4779270633397 24.6218710741835 136.42 62.9884836852207 26.0827805249753 147.196 72.1746641074856 28.3434604620937 168.773 0 0 cat,chimp,cow,dog,elephant,guinea_pig,horse,human,macaque,marmoset,mouse,orangutan,panda,pig,platypus,rabbit,rat, antisense antisense A549@0,AG04450@0.0891875,BJ@0,GM12878@0.161822,H1HESC@0.18582,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0.155926,K562@0.571398,MCF7@0,NHEK@0,NHLF@0.0139585,SKNSHRA@0.109813, 0 0 0 0 ENSG00000241956.4 ENST00000522646.1 chr5:163724135-164598619 6 542 873932 encompassing -0.35 0 0,0,0 0 0,0,0 46.8505535055351 24.6244067044118 161.813 37.0405904059041 26.085466603809 159.928 35.7730627306273 28.3463793521694 187.008 0 0 cat,chimp,cow,dog,elephant,guinea_pig,horse,human,macaque,marmoset,orangutan,panda,pig,rabbit, antisense antisense A549@0,AG04450@0.0891875,BJ@0,GM12878@0.161822,H1HESC@0.18582,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0.155926,K562@0.571398,MCF7@0,NHEK@0,NHLF@0.0139585,SKNSHRA@0.109813, 0 0 0 0 ENSG00000241956.4 ENST00000486913.3 chr5:163781146-164029440 3 1615 246675 intergenic 5.27 0 0,0,1 0 0,0,0 0 24.4894172494173 110.077 0 27.1843275565015 141.629 206.792569659443 28.9684848484848 129.937 1 1 chimp,human,macaque,marmoset,orangutan, antisense antisense A549@0,AG04450@0.0891875,BJ@0,GM12878@0.161822,H1HESC@0.18582,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0.155926,K562@0.571398,MCF7@0,NHEK@0,NHLF@0.0139585,SKNSHRA@0.109813, 0 0 0 0 ENSG00000241956.4 ENST00000519329.1 chr5:163781159-163914148 2 539 132448 intergenic -7.95 0 0,0,0 0 0,0,0 0 17.2396487678183 110.077 12.0927643784787 19.5276259362165 141.629 20.8367346938775 22.118454034791 129.937 0 0 cat,chimp,cow,dog,elephant,guinea_pig,horse,human,macaque,marmoset,mouse,orangutan,panda,rat, antisense antisense A549@0,AG04450@0.0891875,BJ@0,GM12878@0.161822,H1HESC@0.18582,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0.155926,K562@0.571398,MCF7@0,NHEK@0,NHLF@0.0139585,SKNSHRA@0.109813, 0 0 0 0 ENSG00000253236.1 ENST00000519929.1 chr5:163875428-163894408 4 516 18458 intergenic -1.34 0 0,0,0 0 0,0,0 8.02325581395349 10.3074547621627 0 5.98255813953488 6.96099252356702 0 5.98255813953488 8.90378155813197 0 0 0 chimp,horse,human,macaque,marmoset,orangutan, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0.0400285,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@1.24073, 0 0 0 0 ENSG00000241956.4 ENST00000519327.1 chr5:163894296-163969113 5 491 74318 intergenic 1.49 0 0,0,0 0 0,0,0 0 38.8116337899298 0 0 38.5011168223042 0 0 41.1706585214887 0 0 0 chimp,cow,elephant,horse,human,macaque,marmoset,orangutan, antisense antisense A549@0,AG04450@0.0891875,BJ@0,GM12878@0.161822,H1HESC@0.18582,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0.155926,K562@0.571398,MCF7@0,NHEK@0,NHLF@0.0139585,SKNSHRA@0.109813, 0 0 0 0 ENSG00000241956.4 ENST00000519901.1 chr5:163894967-163895651 2 531 151 intergenic -6.12 0 0,0,0 0 0,0,0 0 0 0 0 0 0 0 0 0 0 0 cat,chimp,dog,elephant,horse,human,macaque,marmoset,orangutan,panda,rabbit, antisense antisense A549@0,AG04450@0.0891875,BJ@0,GM12878@0.161822,H1HESC@0.18582,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0.155926,K562@0.571398,MCF7@0,NHEK@0,NHLF@0.0139585,SKNSHRA@0.109813, 0 0 0 0 ENSG00000241956.4 ENST00000519904.1 chr5:163895872-163914043 2 395 17774 intergenic -0.43 0 0,0,0 0 0,0,0 0 37.8669967368066 0 4.23544303797468 40.8308765612693 0 7.0379746835443 45.7522223472488 0 0 0 cat,chimp,cow,dog,elephant,guinea_pig,horse,human,macaque,marmoset,orangutan,panda, antisense antisense A549@0,AG04450@0.0891875,BJ@0,GM12878@0.161822,H1HESC@0.18582,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0.155926,K562@0.571398,MCF7@0,NHEK@0,NHLF@0.0139585,SKNSHRA@0.109813, 0 0 0 0 ENSG00000241956.4 ENST00000522762.1 chr5:163897285-163969990 4 579 72120 intergenic -0.97 1 0,0,0 0 0,0,0 0 39.6850110926234 22.32 0 38.6780366056572 71.866 0 40.6136161952302 130.667 0 0 chimp,cow,dog,horse,human,macaque,marmoset,orangutan,panda, antisense antisense A549@0,AG04450@0.0891875,BJ@0,GM12878@0.161822,H1HESC@0.18582,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0.155926,K562@0.571398,MCF7@0,NHEK@0,NHLF@0.0139585,SKNSHRA@0.109813, 0 0 0 0 ENSG00000241956.4 ENST00000519750.1 chr5:164028229-164151144 5 511 122396 intergenic 3.27 1 0,0,0 0 0,0,0 0 23.9538301905291 0 0.596868884540117 22.4624415830583 0 211.802348336595 23.979746070133 162.214 0 0 cat,chimp,cow,dog,elephant,guinea_pig,horse,human,macaque,marmoset,mouse,opossum,orangutan,pig,rabbit,rat, antisense antisense A549@0,AG04450@0.0891875,BJ@0,GM12878@0.161822,H1HESC@0.18582,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0.155926,K562@0.571398,MCF7@0,NHEK@0,NHLF@0.0139585,SKNSHRA@0.109813, 0 0 0 0 ENSG00000241956.4 ENST00000519267.1 chr5:164400494-164557239 3 534 156207 intergenic 2.46 0 0,0,1 0 0,0,0 0 23.6251960539541 0 1.55056179775281 25.2830218876235 0 2.31460674157303 26.5097210752399 0 0 0 chimp,cow,horse,human,macaque,marmoset,orangutan,panda,rabbit, antisense antisense A549@0,AG04450@0.0891875,BJ@0,GM12878@0.161822,H1HESC@0.18582,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0.155926,K562@0.571398,MCF7@0,NHEK@0,NHLF@0.0139585,SKNSHRA@0.109813, 0 0 0 0 ENSG00000254066.1 ENST00000521341.1 chr5:164647583-164668758 3 1861 19310 intergenic 3.35 0 0,0,0 0 0,0,0 0 48.387881926463 16.191 0 31.0058518902123 0 0 30.0885551527706 0 0 0 NA lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0.0014245,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000254066.1 ENST00000523538.1 chr5:164665489-164667766 3 234 2039 intergenic 0 0 0,0,0 0 0,0,0 0 0 0 0 2.87101520353114 0 0 4.96174595389897 0 0 0 chimp,dog,human,macaque,marmoset,orangutan, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0.0014245,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000253693.1 ENST00000522189.1 chr5:164776036-165205694 2 732 428924 intergenic -4.17 0 0,1,0 0 0,0,0 0 27.4910893305108 0 227.773224043716 26.0193111133907 49.976 4.74453551912568 27.7687935391818 58.405 0 0 cat,chimp,cow,dog,elephant,guinea_pig,horse,human,macaque,marmoset,opossum,orangutan,panda,pig,rabbit, processed_transcript processed_transcript A549@0,AG04450@0.007296,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000254171.1 ENST00000520075.1 chr5:165555503-165582444 3 530 26407 intergenic 4.03 1 0,0,0 0 0,0,0 243.88679245283 0.261294353769834 0 156.750943396226 2.24618472374749 0 162.047169811321 2.49914795319423 0 0 0 cow,human,macaque,orangutan, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000254130.1 ENST00000523742.1 chr5:166332227-166353375 3 563 20581 intergenic 0 0 0,1,1 0 0,0,0 0 52.4505126087168 0 2.54706927175844 53.4137311112191 0 2.898756660746 54.2348768281425 0 0 0 chimp,human,orangutan,rabbit, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0.003665,HELAS3@0.018756,HEPG2@0.0192775,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000253713.1 ENST00000522292.1 chr5:166543323-166546590 2 488 2777 intergenic -0.84 0 0,0,0 0 0,0,0 23.6065573770492 110.739647101188 0 0 71.1858120273677 0 0 74.3226503420958 0 0 0 cat,chimp,cow,dog,elephant,horse,human,macaque,marmoset,orangutan,panda,pig, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000253469.1 ENST00000518330.1 chr5:166591939-166595406 2 628 2837 intergenic -4.63 1 0,1,1 0 0,0,0 0 29.3048995417695 0 24.9458598726115 19.2685935847726 0 7.15605095541401 24.2083186464575 0 0 0 cat,chimp,dog,guinea_pig,horse,human,macaque,marmoset,mouse,orangutan,panda,rabbit,rat, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000254365.1 ENST00000521697.1 chr5:166714325-166721278 2 521 6430 intronic -6.57 0 0,0,0 0 0,0,0 318.731285988484 28.9648522550544 7.36 218.044145873321 8.79844479004666 5.546 180.936660268714 12.0794712286159 5.694 0 0 chimp,cow,dog,guinea_pig,horse,human,macaque,marmoset,orangutan,panda,pig,rabbit,rat, antisense antisense A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@2.76484,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0.0278945,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000254297.1 ENST00000523497.1 chr5:166723239-166730377 3 645 6489 intronic 2.69 0 0,0,0 0 0,0,0 46.4279069767442 6.19509939898289 0 46.7875968992248 3.01556480197257 0 46.0108527131783 4.02928032054246 0 0 0 chimp,guinea_pig,human,macaque,marmoset,mouse,orangutan, antisense antisense A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@3.0703,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000253527.1 ENST00000519892.1 chr5:166733278-166736875 3 524 3069 intronic -3.92 0 0,0,0 0 0,0,0 0 75.29651352232 322.727 3.51145038167939 74.1032909742587 338.512 4.04580152671756 73.3952427500815 384.946 0 0 chimp,dog,horse,human,macaque,marmoset,orangutan,pig,rabbit, antisense antisense A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000254187.1 ENST00000522956.1 chr5:167080233-167087486 2 1122 6129 intronic 0.72 1 0,0,0 0 0,0,0 0 54.8774677761462 82.572 0 76.3923968020884 116.894 0 71.8562571381955 117.303 0 0 chimp,guinea_pig,human,macaque,marmoset,orangutan, antisense antisense A549@0,AG04450@0,BJ@0.004306,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0.073619,HUVEC@0,K562@0,MCF7@0,NHEK@0.00117467,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000253357.1 ENST00000517346.1 chr5:167148368-167156129 2 472 7287 intronic 0.33 0 0,1,1 0 0,0,0 0 10.8892548373816 61.24 0 23.9810621655002 79.968 0 35.1104707012488 82.13 0 0 cat,chimp,dog,elephant,horse,human,macaque,marmoset,orangutan,panda,pig, sense_intronic sense_intronic A549@0,AG04450@0,BJ@0.014232,GM12878@0,H1HESC@0.354189,HELAS3@0.0082245,HEPG2@0.0066385,HMEC@0,HSMM@0.255114,HUVEC@0,K562@0,MCF7@0,NHEK@0.012457,NHLF@0.004212,SKNSHRA@0.0062115, 0 0 0 0 ENSG00000253660.1 ENST00000523050.1 chr5:167364722-167380474 4 659 15087 intronic 0.87 0 0,0,0 0 0,0,0 32.9438543247344 78.0436799893948 0 2.82701062215478 83.873069530059 0 0.65402124430956 84.0469278186518 3.159 0 0 chimp,cow,elephant,horse,human,macaque,marmoset,orangutan,pig, antisense antisense A549@0,AG04450@0,BJ@0,GM12878@0.0141415,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0.352027,HSMM@0.037911,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0.010266, 0 0 0 0 ENSG00000253947.1 ENST00000518837.1 chr5:167392192-167394091 2 487 1410 intronic 0.17 0 0,0,0 0 0,0,0 117.88090349076 148.439716312057 166.652 121.681724845996 115.729078014184 184.217 120.036960985626 122.631205673759 199.899 0 0 chimp,elephant,human,macaque,marmoset,orangutan, antisense antisense A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000253925.1 ENST00000517408.1 chr5:167512334-167614724 6 2175 100205 intronic 5.53 0 0,0,0 0 0,0,0 72.2110344827586 48.7813182974901 209.064 83.0266666666667 54.0121650616237 144.26 120.465747126437 57.3144853051245 151.739 0 0 cat,chimp,cow,dog,elephant,horse,human,macaque,marmoset,opossum,orangutan,panda,pig, antisense antisense A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0.001045,HUVEC@0,K562@0,MCF7@0,NHEK@0.00178633,NHLF@0.013348,SKNSHRA@0.0217585, 0 0 0 0 ENSG00000253978.1 ENST00000519795.1 chr5:167656588-167659362 3 500 2270 intronic 1.05 0 0,1,1 0 0,0,0 225.592 181.525991189427 0 90.474 161.974008810573 0 83.544 187.02731277533 0 0 0 cat,chimp,elephant,guinea_pig,horse,human,macaque,marmoset,orangutan, antisense antisense A549@1.3451,AG04450@0.012821,BJ@0,GM12878@0.0662435,H1HESC@0.525041,HELAS3@0.252031,HEPG2@0.021692,HMEC@0,HSMM@0.0040905,HUVEC@0,K562@0.0138485,MCF7@0.040423,NHEK@0,NHLF@0.007758,SKNSHRA@0.208431, 0 0 0 0 ENSG00000254192.1 ENST00000520041.1 chr5:168081518-168094766 3 807 12437 exonic 1.72 0 0,0,0 0 0,0,0 88.8574969021066 12.9308514915172 13.8 120.232961586121 17.1241456942993 13.908 147.109045848823 20.7699606014312 16.926 0 1 chimp,human,macaque,orangutan, antisense antisense A549@0.0141765,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0.102616,HEPG2@0.134327,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0.020138,NHEK@0.016836,NHLF@0,SKNSHRA@0.092466, 0 0 0 0 ENSG00000254042.1 ENST00000522615.1 chr5:168133572-168147889 6 3472 10835 exonic 2.89 0 0,0,0 0 0,0,0 72.3905529953917 12.1330872173512 0 76.4645737327189 13.1693585602215 0 80.3778801843318 15.7009690816797 0 0 0 chimp,human,marmoset,orangutan,pig,rabbit, antisense antisense A549@0,AG04450@0.002216,BJ@0,GM12878@0.0019275,H1HESC@0.000837,HELAS3@0.0219525,HEPG2@0.0059435,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0.0023515,NHEK@0,NHLF@0,SKNSHRA@0.00513, 0 0 0 0 ENSG00000254042.1 ENST00000521870.1 chr5:168133932-168137086 3 576 2574 intronic 1.02 0 0,1,0 0 0,0,0 0 48.5159285159285 0 0 53.3644133644134 9.591 5.0625 54.4428904428904 9.913 0 0 cat,chimp,cow,dog,elephant,guinea_pig,horse,human,macaque,marmoset,orangutan,panda,pig,rabbit, antisense antisense A549@0,AG04450@0.002216,BJ@0,GM12878@0.0019275,H1HESC@0.000837,HELAS3@0.0219525,HEPG2@0.0059435,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0.0023515,NHEK@0,NHLF@0,SKNSHRA@0.00513, 0 0 0 0 ENSG00000248965.1 ENST00000514811.1 chr5:168420005-168422682 3 362 2311 intronic 1.90 1 0,0,0 0 0,0,0 0 0 0 25 0 37.112 24.9309392265193 2.11813067935958 38.881 0 0 cat,chimp,cow,dog,guinea_pig,horse,human,macaque,marmoset,orangutan,panda,pig,rabbit, antisense antisense A549@0.01848,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0.022436,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000248222.1 ENST00000509170.1 chr5:168440232-168463413 4 590 22585 intronic 1.31 0 0,0,1 0 0,0,0 0 29.7059552800531 36.4 6.50677966101695 22.9825990701793 13.012 10.5440677966102 24.4928492362187 24.227 0 0 chimp,cow,dog,elephant,guinea_pig,horse,human,macaque,marmoset,orangutan, antisense antisense A549@0,AG04450@0,BJ@0.0048055,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0.086573,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0.0028255, 0 0 0 0 ENSG00000248222.1 ENST00000504527.1 chr5:168440253-168445707 3 554 4896 intronic 2.63 0 0,0,0 0 0,0,0 0 8.29044117647059 36.4 10.7274368231047 8.27777777777778 13.012 7.16606498194946 10.297181372549 24.227 0 0 chimp,dog,horse,human,macaque,marmoset,orangutan,rabbit, antisense antisense A549@0,AG04450@0,BJ@0.0048055,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0.086573,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0.0028255, 0 0 0 0 ENSG00000248222.1 ENST00000513790.1 chr5:168440253-168449876 5 568 9047 intronic 2.63 0 0,0,0 0 0,0,0 0 4.48657013374599 36.4 3.9806338028169 5.49718138609484 13.012 1 6.81496628716702 24.227 0 0 chimp,elephant,horse,human,macaque,marmoset,orangutan,panda,pig, antisense antisense A549@0,AG04450@0,BJ@0.0048055,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0.086573,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0.0028255, 0 0 0 0 ENSG00000248222.1 ENST00000508547.1 chr5:168440253-168451093 4 544 10290 intronic 14.23 0 0,0,1 0 0,0,0 0 3.94460641399417 36.4 4.15625 4.83313896987366 13.012 1.04411764705882 5.99173955296404 24.227 0 0 chimp,cow,dog,human,macaque,marmoset,orangutan,pig, antisense antisense A549@0,AG04450@0,BJ@0.0048055,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0.086573,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0.0028255, 0 0 0 0 ENSG00000248222.1 ENST00000512417.1 chr5:168440253-168453636 4 799 12578 intronic 15.22 0 0,0,1 0 0,0,0 0 12.7617268246144 36.4 2.82978723404255 11.5786293528383 13.012 0.710888610763454 12.6606773731913 24.227 0 0 chimp,horse,human,macaque,marmoset,orangutan,panda, antisense antisense A549@0,AG04450@0,BJ@0.0048055,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0.086573,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0.0028255, 0 0 0 0 ENSG00000248222.1 ENST00000511447.1 chr5:168440253-168463475 3 570 22648 intronic 12.34 0 0,0,1 0 0,0,0 0 29.623322147651 36.4 14.2298245614035 22.918668315083 13.012 19.019298245614 24.4247174143412 24.227 0 0 chimp,cow,horse,human,macaque,marmoset,orangutan,panda, antisense antisense A549@0,AG04450@0,BJ@0.0048055,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0.086573,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0.0028255, 0 0 0 0 ENSG00000248222.1 ENST00000507092.1 chr5:168440266-168453396 3 451 12675 intronic 6.02 0 0,0,0 0 0,0,0 0 12.6640631163708 36.4 5.01330376940133 11.4900197238659 13.012 1.25942350332594 12.5637869822485 24.227 0 0 chimp,elephant,horse,human,macaque,marmoset,orangutan, antisense antisense A549@0,AG04450@0,BJ@0.0048055,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0.086573,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0.0028255, 0 0 0 0 ENSG00000248222.1 ENST00000508600.1 chr5:168440267-168449216 4 557 8386 intronic 2.63 0 0,0,0 0 0,0,0 0 4.84020987359886 36.4 4.05924596050269 5.9304793703792 13.012 1.0197486535009 7.35213450989745 24.227 0 0 chimp,horse,human,macaque,marmoset,orangutan,rabbit, antisense antisense A549@0,AG04450@0,BJ@0.0048055,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0.086573,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0.0028255, 0 0 0 0 ENSG00000248222.1 ENST00000507304.1 chr5:168440269-168451992 4 1485 10232 intronic 15.02 0 0,0,1 0 0,0,0 32.6915824915825 3.96696637998436 36.4 19.8868686868687 4.86053557466771 13.012 21.8222222222222 6.02570367474589 24.227 0 0 chimp,dog,guinea_pig,horse,human,macaque,marmoset,orangutan,panda, antisense antisense A549@0,AG04450@0,BJ@0.0048055,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0.086573,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0.0028255, 0 0 0 0 ENSG00000248222.1 ENST00000508470.1 chr5:168457443-168465003 3 569 6987 intronic 1.31 1 0,0,0 0 0,0,0 0 12.3732646343209 255.154 43.6467486818981 75.6962931157865 115.552 53.884007029877 28.7343638185201 122.14 0 0 cat,chimp,cow,dog,elephant,guinea_pig,horse,human,macaque,marmoset,orangutan,panda,rabbit, antisense antisense A549@0,AG04450@0,BJ@0.0048055,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0.086573,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0.0028255, 0 0 0 0 ENSG00000253269.1 ENST00000523398.1 chr5:169199970-169206369 2 281 6116 intronic -1.57 0 0,0,0 0 0,0,0 0 8.24231523871812 0 30.2419928825623 11.1880313930674 4.32 41.0249110320285 10.7617724002616 4.448 0 0 cat,chimp,cow,dog,elephant,guinea_pig,horse,human,macaque,marmoset,mouse,orangutan,panda,pig,rabbit, antisense antisense A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000249601.2 ENST00000506431.2 chr5:169618583-169626145 4 2310 5246 intergenic 4.56 1 0,0,1 0 0,0,0 0 16.8745711017918 83.126 5.38181818181818 26.9775066717499 115.94 10.565367965368 29.1265726267633 113.018 0 0 cat,chimp,dog,human,macaque,marmoset,orangutan,panda, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0.0027555,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0.000869,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000249601.2 ENST00000520275.1 chr5:169623579-169626104 3 491 2030 intergenic 0.62 0 0,0,0 0 0,0,0 0 0 83.126 6.42769857433809 13.0014778325123 115.94 19.6598778004073 16.6605911330049 114.463 0 0 cat,chimp,cow,dog,elephant,guinea_pig,horse,human,macaque,marmoset,orangutan,panda,pig,rabbit, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0.0027555,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0.000869,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000250274.1 ENST00000511921.1 chr5:169735705-169739720 2 2180 1833 intergenic 0.25 0 0,0,1 0 0,0,0 2.7802752293578 0 0 2.88577981651376 0 2.48 3.00596330275229 0.897435897435897 2.59 0 0 chimp,dog,human,macaque,marmoset,orangutan,panda,pig, lincRNA lincRNA A549@0.008782,AG04450@0,BJ@0,GM12878@0.061834,H1HESC@0.0019015,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0.0566895,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0.0050975, 0 0 0 0 ENSG00000235172.3 ENST00000521471.1 chr5:169758433-169760764 3 844 1483 intergenic 1.37 0 0,1,0 1 0,1,0 0 0 6.9 6.739336492891 0 13.031 6.88388625592417 0 13.722 0 0 chimp,dog,human,macaque,marmoset,orangutan, lincRNA processed_transcript A549@0.0132025,AG04450@0,BJ@0.0029065,GM12878@0.32136,H1HESC@0.034154,HELAS3@0.0057575,HEPG2@0,HMEC@0.02255,HSMM@0.0219705,HUVEC@0.027553,K562@2.1944,MCF7@0.0043295,NHEK@0.001821,NHLF@0,SKNSHRA@0.008948, 0 0 0 0 ENSG00000235172.3 ENST00000518357.1 chr5:169758434-169760714 2 723 1555 intergenic 2.00 0 0,1,0 1 0,1,0 0 0 6.9 7.86721991701245 0 13.031 8.0359612724758 0 13.722 0 0 chimp,cow,dog,elephant,horse,human,macaque,marmoset,orangutan,pig, lincRNA processed_transcript A549@0.0132025,AG04450@0,BJ@0.0029065,GM12878@0.32136,H1HESC@0.034154,HELAS3@0.0057575,HEPG2@0,HMEC@0.02255,HSMM@0.0219705,HUVEC@0.027553,K562@2.1944,MCF7@0.0043295,NHEK@0.001821,NHLF@0,SKNSHRA@0.008948, 0 0 0 0 ENSG00000235172.3 ENST00000436248.3 chr5:169758435-169760883 3 980 1464 intergenic 5.23 0 0,1,0 1 0,1,0 0 0 6.9 5.80408163265306 0 13.031 5.92857142857143 0 13.722 1 1 chimp,human,macaque,marmoset,orangutan, lincRNA processed_transcript A549@0.0132025,AG04450@0,BJ@0.0029065,GM12878@0.32136,H1HESC@0.034154,HELAS3@0.0057575,HEPG2@0,HMEC@0.02255,HSMM@0.0219705,HUVEC@0.027553,K562@2.1944,MCF7@0.0043295,NHEK@0.001821,NHLF@0,SKNSHRA@0.008948, 0 0 0 0 ENSG00000253647.1 ENST00000518387.1 chr5:169816497-169849848 3 1212 32135 exonic -0.42 0 0,1,0 0 0,0,0 0 1.45511124941652 0 1.47277227722772 3.77277112182978 36.871 0 4.4469270266065 38 0 0 chimp,dog,elephant,horse,human,macaque,marmoset,orangutan,panda,pig,rabbit, antisense antisense A549@0,AG04450@0,BJ@0,GM12878@0.00957,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000253858.1 ENST00000524312.1 chr5:169910810-169913411 2 565 2034 intronic -1.14 0 0,1,0 0 0,0,0 0 0 9.02 0 16.5137659783678 4.063 0 20.3166175024582 5.343 0 0 chimp,horse,human,marmoset,orangutan, antisense antisense A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0.005133,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0.007258,HUVEC@0,K562@0,MCF7@0.0141835,NHEK@0,NHLF@0.0068825,SKNSHRA@0.008003, 0 0 0 0 ENSG00000253591.1 ENST00000523591.1 chr5:170066162-170108441 6 1565 40704 intronic 3.82 1 0,0,0 0 0,0,0 8.95974440894569 21.2487716194969 0 18.7182108626198 25.2008893474843 0 14.1316293929712 25.6146816037736 0 0 0 chimp,cow,guinea_pig,horse,human,marmoset,panda, antisense antisense A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0.0501435,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0.006544,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000253348.1 ENST00000521965.1 chr5:170174051-170185183 3 599 10529 intergenic 1.53 0 0,0,0 0 0,0,0 0 2.59568809953462 0 3.98998330550918 4.28388260993447 0 4.0567612687813 5.18539272485516 0 0 0 chimp,elephant,human,macaque,marmoset,pig,rabbit, antisense antisense A549@0,AG04450@0,BJ@0,GM12878@0.003512,H1HESC@0.466507,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0.038919,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000253348.1 ENST00000503797.2 chr5:170184889-170194562 2 343 9328 intronic 5.03 0 0,0,1 0 0,0,0 0 2.1875 0 0 1.40180102915952 0 0 1.94532590051458 0 0 1 chimp,human, antisense antisense A549@0,AG04450@0,BJ@0,GM12878@0.003512,H1HESC@0.466507,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0.038919,NHEK@0,NHLF@0,SKNSHRA@0, 165 2 0 0 ENSG00000253348.1 ENST00000518172.1 chr5:170194208-170215654 3 571 20871 exonic 5.03 0 0,0,0 0 0,0,0 0 0 32.594 3.57267950963222 1.97168319678022 55.086 9.69702276707531 2.5015092712376 57.599 0 0 dog,human,orangutan, antisense antisense A549@0,AG04450@0,BJ@0,GM12878@0.003512,H1HESC@0.466507,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0.038919,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000255373.1 ENST00000528269.1 chr5:170732985-170735809 1 2824 0 intergenic 16.35 0 0,1,0 0 0,0,0 14.2935552407932 0 569.517 25.621104815864 0 638.087 27.125 0 661.437 0 0 cat,chimp,dog,horse,human,macaque,orangutan,panda,pig, antisense antisense A549@0,AG04450@0,BJ@0.002291,GM12878@0.0020705,H1HESC@0,HELAS3@0.496707,HEPG2@0.192149,HMEC@0,HSMM@0.001614,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0.275617, 0 0 0 0 ENSG00000254299.1 ENST00000517916.1 chr5:171984395-171986017 3 413 1205 intergenic 0 0 0,0,0 0 0,0,0 0 0 20.935 14.9467312348668 0.396680497925311 24.195 21.8789346246973 2.67136929460581 27.032 0 0 cat,chimp,elephant,horse,human,macaque,marmoset,orangutan,panda,pig, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000253445.1 ENST00000519976.1 chr5:172117457-172124723 2 526 6738 exonic 7.08 0 0,0,0 0 0,0,0 0 32.0816265954289 0 5.5 30.7186108637578 0 8.22243346007605 30.3217571979816 0 0 0 cat,chimp,cow,dog,elephant,guinea_pig,horse,human,macaque,marmoset,orangutan,panda,pig,rabbit, antisense antisense A549@0.01998,AG04450@0,BJ@0,GM12878@0,H1HESC@0.009373,HELAS3@0.0042795,HEPG2@0.0206645,HMEC@0,HSMM@0.0272785,HUVEC@0,K562@0,MCF7@0.007788,NHEK@0,NHLF@0,SKNSHRA@0.005094, 0 0 0 0 ENSG00000253295.1 ENST00000518941.1 chr5:172185229-172189559 3 469 3857 intergenic 10.39 0 0,0,0 0 0,0,0 0 0 0 197.102345415778 8.81047446201711 3.822 340.162046908316 8.85921700803733 4.2 0 0 cat,chimp,cow,dog,elephant,human,macaque,marmoset,mouse,orangutan,panda,rabbit,rat, antisense antisense A549@0.0357265,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0.0224915,HEPG2@0.028582,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000253736.1 ENST00000523005.1 chr5:172189983-172204777 2 350 14442 encompassing 5.17 0 0,0,0 0 0,0,0 0 77.5105248580529 0 6.57142857142857 75.2658911508101 117.445 149 84.3770253427503 464.28 0 0 cat,chimp,cow,dog,elephant,guinea_pig,horse,human,macaque,orangutan,panda,pig,rabbit, antisense antisense A549@0.178723,AG04450@0.0610695,BJ@0.020744,GM12878@0.021626,H1HESC@0.034013,HELAS3@0.128663,HEPG2@0.093643,HMEC@0,HSMM@0.040686,HUVEC@0.051936,K562@0.0282945,MCF7@0.005841,NHEK@0,NHLF@0.021988,SKNSHRA@0.0129025, 0 0 0 0 ENSG00000253628.1 ENST00000518260.1 chr5:172243624-172246961 2 580 2755 intergenic 5.71 0 0,0,0 0 0,0,0 0 0 0 0 0 15.584 0 0.882032667876588 15.852 0 0 chimp,dog,horse,human,macaque,marmoset,orangutan,panda, lincRNA lincRNA A549@0.0244105,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0.0080315,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0.115708,MCF7@0,NHEK@0,NHLF@0.0299495,SKNSHRA@0, 0 0 0 0 ENSG00000204758.3 ENST00000520067.1 chr5:172381789-172385781 4 962 3024 exonic -10.41 0 1,1,1 0 0,1,0 0 0 0 0 1.06613756613757 5.433 0 2.96164021164021 6.55 0 1 chimp,human,orangutan, lincRNA processed_transcript A549@2.38582,AG04450@0.103995,BJ@0.350668,GM12878@0.089881,H1HESC@0.121325,HELAS3@1.01737,HEPG2@0.262122,HMEC@0.074,HSMM@0.395516,HUVEC@0.135946,K562@0.143504,MCF7@0.162459,NHEK@0.200932,NHLF@0.266262,SKNSHRA@0.341776, 0 0 0 0 ENSG00000254295.1 ENST00000519755.1 chr5:172381910-172384165 3 486 1765 intergenic 5.33 0 0,0,0 0 0,0,0 0 0 0 0 1.82662889518414 0 11.5 1.90764872521246 0 0 0 chimp,elephant,human,macaque,marmoset,orangutan, lincRNA lincRNA A549@0.11211,AG04450@0.080569,BJ@0.131498,GM12878@0.065397,H1HESC@0.072368,HELAS3@0.0986755,HEPG2@0.21359,HMEC@0.008373,HSMM@0.114979,HUVEC@0.021355,K562@0.015973,MCF7@0.04187,NHEK@0.141603,NHLF@0.007936,SKNSHRA@0.0722465, 0 0 0 0 ENSG00000204758.3 ENST00000518818.1 chr5:172382157-172386380 3 2064 2155 intronic 2.32 0 1,1,1 0 0,1,0 0 0 56.8 0.864825581395349 1.49605568445476 90.858 0.878391472868217 4.15591647331787 101.203 1 1 chimp,human,macaque,marmoset,orangutan, lincRNA processed_transcript A549@2.38582,AG04450@0.103995,BJ@0.350668,GM12878@0.089881,H1HESC@0.121325,HELAS3@1.01737,HEPG2@0.262122,HMEC@0.074,HSMM@0.395516,HUVEC@0.135946,K562@0.143504,MCF7@0.162459,NHEK@0.200932,NHLF@0.266262,SKNSHRA@0.341776, 0 0 0 0 ENSG00000204758.3 ENST00000518894.1 chr5:172382768-172386395 5 543 3076 intronic -0.15 0 0,1,0 0 0,1,0 0 0 56.8 3.28729281767956 1.0481144343303 90.858 3.33885819521179 2.91157347204161 101.203 1 1 chimp,human,macaque,marmoset,orangutan, lincRNA processed_transcript A549@2.38582,AG04450@0.103995,BJ@0.350668,GM12878@0.089881,H1HESC@0.121325,HELAS3@1.01737,HEPG2@0.262122,HMEC@0.074,HSMM@0.395516,HUVEC@0.135946,K562@0.143504,MCF7@0.162459,NHEK@0.200932,NHLF@0.266262,SKNSHRA@0.341776, 0 0 0 0 ENSG00000253172.1 ENST00000521251.1 chr5:172571165-172572042 2 494 381 exonic 7.81 0 0,1,0 0 0,0,0 41.4291497975709 40.7847769028871 0 59.2105263157895 79.511811023622 0 43.1518218623482 83.4803149606299 0 0 0 cat,chimp,cow,dog,guinea_pig,human,macaque,marmoset,orangutan,panda,pig, antisense antisense A549@0.0167065,AG04450@0,BJ@0,GM12878@0.004064,H1HESC@0,HELAS3@0.016831,HEPG2@0.0140905,HMEC@0,HSMM@0,HUVEC@0.0070465,K562@0.0093625,MCF7@0.0141485,NHEK@0,NHLF@0.0489115,SKNSHRA@0, 0 0 0 0 ENSG00000247006.1 ENST00000501670.1 chr5:172720132-172721732 2 1006 592 intergenic 6.47 0 1,1,1 0 0,0,0 0 0 0 0 13.8091216216216 0 0 13.7922297297297 0 0 0 chimp,human,macaque,marmoset,orangutan,pig, lincRNA lincRNA A549@0.007047,AG04450@0.0495955,BJ@0.0411045,GM12878@0.0607955,H1HESC@0.180078,HELAS3@0.307116,HEPG2@3.752,HMEC@0.008124,HSMM@0.03172,HUVEC@0.231781,K562@0.0391195,MCF7@8.19055,NHEK@0.00261367,NHLF@0.0191635,SKNSHRA@0.021285, 0 0 0 0 ENSG00000253968.1 ENST00000523205.1 chr5:172841038-172878168 4 535 36589 intergenic 0.95 0 0,0,0 0 0,0,0 0 9.80059580748312 0 0 9.68690043455683 0 0 10.4565579819071 0 0 0 chimp,dog,horse,human,marmoset,orangutan,panda, lincRNA lincRNA A549@0,AG04450@0.0642335,BJ@0.0482375,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0.019911,HUVEC@0,K562@0,MCF7@0.007629,NHEK@0.00236833,NHLF@0.0143195,SKNSHRA@0, 0 0 0 0 ENSG00000253141.1 ENST00000519400.1 chr5:172890503-172896884 3 750 5627 intergenic 5.76 0 0,0,0 0 0,0,0 0 0 0 0 0.976897103252177 0 0 1.00888572951839 0 0 0 chimp,horse,human,macaque,marmoset,orangutan, lincRNA lincRNA A549@0.0065505,AG04450@0.013397,BJ@0.024748,GM12878@0,H1HESC@0,HELAS3@0.0035245,HEPG2@0,HMEC@0,HSMM@0.0178625,HUVEC@0,K562@0,MCF7@0.0027305,NHEK@0.0232457,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000253141.1 ENST00000518605.1 chr5:172896685-172911587 3 449 14449 intergenic -0.77 0 0,0,0 0 0,0,0 0 16.8339677486331 0 0 14.5697972178005 2.629 11.739420935412 19.4382310194477 2.761 0 0 chimp,dog,elephant,guinea_pig,horse,human,macaque,marmoset,orangutan,rabbit, lincRNA lincRNA A549@0.0065505,AG04450@0.013397,BJ@0.024748,GM12878@0,H1HESC@0,HELAS3@0.0035245,HEPG2@0,HMEC@0,HSMM@0.0178625,HUVEC@0,K562@0,MCF7@0.0027305,NHEK@0.0232457,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000253768.1 ENST00000519821.1 chr5:172989481-173000202 3 452 10265 intergenic -3.37 0 0,0,1 0 0,0,0 0 15.5861665854847 0 0 12.8171456405261 0 0 12.9300535801266 0 0 0 cat,chimp,cow,horse,human,macaque,marmoset,orangutan, lincRNA lincRNA A549@0,AG04450@0.0687555,BJ@0.010637,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0.252359,HUVEC@0,K562@0,MCF7@0.513288,NHEK@0.034051,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000254164.1 ENST00000520300.1 chr5:173001941-173003278 2 455 880 intergenic 4.86 0 0,0,0 0 0,0,0 0 0 0 0 0 0 0 0 0 1 1 chimp,human,macaque,marmoset,orangutan, lincRNA lincRNA A549@0,AG04450@0,BJ@0.0107745,GM12878@0,H1HESC@0.0325145,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0.0451415,HUVEC@0,K562@0,MCF7@0.170527,NHEK@0.002889,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000253955.1 ENST00000517299.1 chr5:173006646-173012071 4 1773 3646 intergenic 0.81 1 0,0,0 0 0,0,0 0 0 0 0 2.50877674163467 0 0 2.53455842018651 0 0 1 chimp,human,marmoset,orangutan, antisense antisense A549@0,AG04450@0.013031,BJ@0.001736,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0.0015025,HMEC@0,HSMM@0.019803,HUVEC@0,K562@0,MCF7@0.113791,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000253955.1 ENST00000519897.1 chr5:173006652-173008615 2 1416 545 intergenic 0.24 1 0,0,0 0 0,0,0 0 0 0 0 0 0 0 0 0 1 1 chimp,human,macaque,marmoset,orangutan, antisense antisense A549@0,AG04450@0.013031,BJ@0.001736,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0.0015025,HMEC@0,HSMM@0.019803,HUVEC@0,K562@0,MCF7@0.113791,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000253959.1 ENST00000523242.1 chr5:173069522-173085197 2 492 15181 intergenic -1.50 1 0,1,1 0 0,0,0 204.243902439024 6.31084908767538 0 123.823170731707 3.54765825703182 0 123.247967479675 3.62696792042685 0 0 0 cat,chimp,cow,dog,guinea_pig,horse,human,macaque,marmoset,mouse,orangutan,panda,pig,rat, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0.0078995,SKNSHRA@0, 0 0 0 0 ENSG00000253428.1 ENST00000521373.1 chr5:173116462-173132852 3 510 15876 intergenic -8.74 0 0,1,0 1 0,0,0 15.2549019607843 13.8213025951121 99.684 21.3901960784314 14.356072058453 11.694 21.7372549019608 16.1010959939531 15.791 0 0 chimp,horse,human,macaque,marmoset,orangutan,pig,rabbit, lincRNA lincRNA A549@1.88716,AG04450@0,BJ@0,GM12878@0.0114015,H1HESC@0.04641,HELAS3@0.211553,HEPG2@0.809851,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000253686.1 ENST00000517733.1 chr5:173134617-173173212 3 552 38039 intergenic -6.50 0 0,1,0 0 0,0,0 0 2.11501353873656 0 0 3.71484529035989 0 0 4.49911932490339 0 0 0 cat,horse,human,macaque,marmoset,orangutan,rabbit, lincRNA lincRNA A549@0.0671695,AG04450@0.007578,BJ@0,GM12878@0,H1HESC@0.507463,HELAS3@4.25682,HEPG2@2.46375,HMEC@0.003469,HSMM@0,HUVEC@0,K562@0.0126705,MCF7@0.106194,NHEK@0,NHLF@0,SKNSHRA@0.0028865, 0 0 0 0 ENSG00000253686.1 ENST00000521128.1 chr5:173137443-173146695 2 2359 6891 intergenic -0.05 0 0,0,0 0 0,0,0 0 0 4.807 0 1.15614569728632 7.936 0.658753709198813 1.16891597736178 11.742 0 0 elephant,human,macaque,marmoset,orangutan, lincRNA lincRNA A549@0.0671695,AG04450@0.007578,BJ@0,GM12878@0,H1HESC@0.507463,HELAS3@4.25682,HEPG2@2.46375,HMEC@0.003469,HSMM@0,HUVEC@0,K562@0.0126705,MCF7@0.106194,NHEK@0,NHLF@0,SKNSHRA@0.0028865, 0 0 0 0 ENSG00000253686.1 ENST00000518902.1 chr5:173146249-173173214 2 488 26475 intergenic -19.50 0 0,1,0 0 0,0,0 0 3.03882908404155 0 0 3.84819641170916 0 0 4.51312559017942 0 0 1 chimp,human,marmoset,orangutan, lincRNA lincRNA A549@0.0671695,AG04450@0.007578,BJ@0,GM12878@0,H1HESC@0.507463,HELAS3@4.25682,HEPG2@2.46375,HMEC@0.003469,HSMM@0,HUVEC@0,K562@0.0126705,MCF7@0.106194,NHEK@0,NHLF@0,SKNSHRA@0.0028865, 0 0 0 0 ENSG00000254211.1 ENST00000520324.1 chr5:173213793-173215416 3 563 1056 intergenic -0.49 0 0,1,1 0 0,0,0 0 0 0 0 0 5.966 0 0 6.099 1 1 chimp,human,macaque,marmoset,orangutan, lincRNA lincRNA A549@0.0044985,AG04450@0.004161,BJ@0,GM12878@0.0106845,H1HESC@0,HELAS3@0.0599665,HEPG2@0.0820345,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000254211.1 ENST00000523617.1 chr5:173213931-173217928 4 582 3409 intergenic -4.49 0 0,0,0 0 0,0,0 0 0 0 0 1.75007333528894 0 0 1.78908770900557 0 1 1 chimp,human,macaque,marmoset,orangutan, lincRNA lincRNA A549@0.0044985,AG04450@0.004161,BJ@0,GM12878@0.0106845,H1HESC@0,HELAS3@0.0599665,HEPG2@0.0820345,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000254211.1 ENST00000522731.1 chr5:173216278-173217945 3 611 1052 intergenic -2.86 0 0,0,0 0 0,0,0 0 0 0 0 0 0 0 0 0 1 1 chimp,human,macaque,marmoset,orangutan, lincRNA lincRNA A549@0.0044985,AG04450@0.004161,BJ@0,GM12878@0.0106845,H1HESC@0,HELAS3@0.0599665,HEPG2@0.0820345,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000254211.1 ENST00000522571.1 chr5:173217462-173234884 2 555 16865 intergenic 7.38 0 0,0,0 0 0,0,0 0 2.11277794248444 0 0 2.58363474651645 2.07 0 3.76276311888527 2.187 0 0 cat,chimp,human,macaque,marmoset,orangutan, lincRNA lincRNA A549@0.0044985,AG04450@0.004161,BJ@0,GM12878@0.0106845,H1HESC@0,HELAS3@0.0599665,HEPG2@0.0820345,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000254211.1 ENST00000518675.1 chr5:173217812-173236042 2 370 17858 intergenic -8.46 0 0,1,0 0 0,0,0 0 1.99529622578116 0 5.59459459459459 2.43997088139769 0 5.91081081081081 3.55353343039534 0 0 1 chimp,human,macaque,marmoset, lincRNA lincRNA A549@0.0044985,AG04450@0.004161,BJ@0,GM12878@0.0106845,H1HESC@0,HELAS3@0.0599665,HEPG2@0.0820345,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000253244.1 ENST00000523279.1 chr5:173483063-173483588 2 287 236 intronic -2.74 1 0,1,1 0 0,0,0 0 0 50.479 0 0 101.548 0 0 100.734 0 0 chimp,horse,human,macaque,orangutan, antisense antisense A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000253447.1 ENST00000517582.1 chr5:173508509-173513562 4 541 4506 intronic 2.08 0 0,0,0 0 0,0,0 0 0 14.649 0 3.18908122503329 44.07 0 3.44052374611629 40.915 0 0 chimp,elephant,human,macaque,marmoset,orangutan, antisense antisense A549@0,AG04450@0,BJ@0.0057125,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0.013227,NHEK@0,NHLF@0,SKNSHRA@0.021093, 0 0 0 0 ENSG00000253447.1 ENST00000519942.1 chr5:173508521-173513545 3 453 4567 intronic 2.08 0 0,0,0 0 0,0,0 0 0 14.649 0 3.14648565798117 44.07 0 3.39456973943508 40.915 0 0 chimp,horse,human,macaque,marmoset,orangutan, antisense antisense A549@0,AG04450@0,BJ@0.0057125,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0.013227,NHEK@0,NHLF@0,SKNSHRA@0.021093, 0 0 0 0 ENSG00000253447.1 ENST00000520190.1 chr5:173509278-173513478 2 429 3769 intronic 2.08 0 0,1,0 0 0,0,0 0 0 14.649 8.32167832167832 1.7659856725922 44.07 8.87645687645688 1.81560095516052 40.915 0 0 cat,chimp,cow,dog,elephant,guinea_pig,horse,human,macaque,marmoset,mouse,orangutan,panda,pig, antisense antisense A549@0,AG04450@0,BJ@0.0057125,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0.013227,NHEK@0,NHLF@0,SKNSHRA@0.021093, 0 0 0 0 ENSG00000254011.1 ENST00000520587.1 chr5:173600104-173608817 2 434 8277 intronic -0.48 0 0,0,0 0 0,0,0 0 3.83194394104144 20.901 0 2.35967137851879 37.98 0 2.97184970399903 40.09 1 1 chimp,human,macaque,marmoset,orangutan, sense_intronic sense_intronic A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0.010061, 0 0 0 0 ENSG00000249722.1 ENST00000503317.1 chr5:173756615-173757506 2 556 333 intergenic 5.23 0 0,0,0 0 0,0,0 0 0 0 0 0 4.811 0 0 4.913 0 0 chimp,cow,horse,human,macaque,marmoset,orangutan,panda,pig, lincRNA lincRNA A549@0,AG04450@0.0212215,BJ@0,GM12878@0.02,H1HESC@0.0106515,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0.0110625,HUVEC@0,K562@0,MCF7@0.0072875,NHEK@0,NHLF@0,SKNSHRA@0.226134, 0 0 0 0 ENSG00000249306.1 ENST00000515513.1 chr5:173763298-173953457 5 771 189380 intergenic -0.24 0 0,0,0 0 0,0,0 0 13.0259108670398 0 90.3865110246433 11.325298341958 19.377 93.1076523994812 20.2055338472912 34.174 1 1 chimp,human,macaque,marmoset,orangutan, processed_transcript processed_transcript A549@0,AG04450@0.0091965,BJ@0.047076,GM12878@0,H1HESC@0,HELAS3@0.114796,HEPG2@0.0414455,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0.004317,NHEK@0.021232,NHLF@0,SKNSHRA@0.219266, 0 0 0 0 ENSG00000249306.1 ENST00000507361.1 chr5:173763357-173955718 4 827 191528 intergenic -0.24 0 0,0,0 0 0,0,0 0 12.8798243598847 0 8.9310761789601 11.3535566601228 19.625 10.6614268440145 20.2126686437492 34.425 0 0 chimp,dog,horse,human,macaque,marmoset,orangutan,pig, processed_transcript processed_transcript A549@0,AG04450@0.0091965,BJ@0.047076,GM12878@0,H1HESC@0,HELAS3@0.114796,HEPG2@0.0414455,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0.004317,NHEK@0.021232,NHLF@0,SKNSHRA@0.219266, 0 0 0 0 ENSG00000249306.1 ENST00000510234.1 chr5:173763498-173954048 6 838 189702 intergenic 3.47 0 0,0,0 0 0,0,0 0 13.0038006979368 0 0 11.4309548660531 19.625 1.49761336515513 20.3742501396928 34.425 1 1 chimp,human,macaque,marmoset,orangutan, processed_transcript processed_transcript A549@0,AG04450@0.0091965,BJ@0.047076,GM12878@0,H1HESC@0,HELAS3@0.114796,HEPG2@0.0414455,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0.004317,NHEK@0.021232,NHLF@0,SKNSHRA@0.219266, 0 0 0 0 ENSG00000249306.1 ENST00000504512.1 chr5:173930686-173953383 3 558 22135 intergenic -9.23 0 0,0,0 0 0,0,0 121.745519713262 12.3207138016716 94.956 107.372759856631 11.3990512762593 98.136 123.673835125448 64.9886153151118 86.779 0 0 cat,chimp,human,macaque,marmoset,opossum,orangutan, processed_transcript processed_transcript A549@0,AG04450@0.0091965,BJ@0.047076,GM12878@0,H1HESC@0,HELAS3@0.114796,HEPG2@0.0414455,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0.004317,NHEK@0.021232,NHLF@0,SKNSHRA@0.219266, 0 0 0 0 ENSG00000249306.1 ENST00000511707.1 chr5:173930818-173947668 3 561 16285 intergenic -1.91 0 0,1,0 0 0,0,0 115.204991087344 16.0545901136015 103.812 106.798573975045 15.3529628492478 98.136 129.19073083779 61.3078906969604 86.779 0 0 chimp,elephant,human,macaque,marmoset,orangutan,pig, processed_transcript processed_transcript A549@0,AG04450@0.0091965,BJ@0.047076,GM12878@0,H1HESC@0,HELAS3@0.114796,HEPG2@0.0414455,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0.004317,NHEK@0.021232,NHLF@0,SKNSHRA@0.219266, 0 0 0 0 ENSG00000249306.1 ENST00000506862.1 chr5:173944762-173959460 4 740 13952 intergenic -0.75 1 0,1,1 0 0,0,0 6.81081081081081 15.3656823394495 0 6.3972972972973 14.3233944954128 0 11.1864864864865 47.9380017201835 0 0 0 chimp,horse,human,macaque,marmoset,orangutan, processed_transcript processed_transcript A549@0,AG04450@0.0091965,BJ@0.047076,GM12878@0,H1HESC@0,HELAS3@0.114796,HEPG2@0.0414455,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0.004317,NHEK@0.021232,NHLF@0,SKNSHRA@0.219266, 0 0 0 0 ENSG00000250256.1 ENST00000505567.1 chr5:174045167-174052778 4 655 6950 intergenic 1.45 0 0,1,0 0 0,0,0 0 22.9476258992806 26.691 0 16.7215827338129 50.925 0 22.6610071942446 51.84 0 0 chimp,cow,horse,human,macaque,marmoset,orangutan,pig, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0.007114,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0.003051,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000251670.1 ENST00000502684.1 chr5:174178307-174277728 4 453 98962 intergenic -1.65 0 0,1,0 0 0,0,0 57.6534216335541 6.85267072209535 37.843 10.1324503311258 6.81113962935268 40.149 10.2913907284768 10.1486833329965 97.592 1 1 chimp,human,macaque,marmoset,orangutan, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0.006634,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0.0049735, 0 0 0 0 ENSG00000251144.1 ENST00000510150.1 chr5:174247030-174253327 2 285 6010 intergenic -1.14 0 0,0,0 0 0,0,0 0 0 0 0 0 0 0 1.24975041597338 0 0 0 NA lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0.003775,HUVEC@0,K562@0,MCF7@0,NHEK@0.0228483,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000204754.3 ENST00000377300.3 chr5:174346085-174422516 3 1922 74505 intergenic 8.52 0 0,0,0 0 0,1,0 0 2.01747533722569 0 0 3.15623112542782 9.468 0 14.413609824844 10.224 0 1 chimp,human,macaque, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0.0030235,HELAS3@0.0023475,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0.067518,SKNSHRA@0, 0 0 0 0 ENSG00000249403.1 ENST00000507398.1 chr5:174413298-174414053 2 340 413 intergenic 0 0 0,0,0 0 0,0,0 0 0 0 0 0 0 0 0 0 0 1 chimp,human,macaque,orangutan, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000250820.1 ENST00000502813.1 chr5:175333942-175385541 2 566 51031 intronic 0 0 0,0,1 0 0,0,0 0 3.57692383061277 0 0 5.47606356920303 0 0 6.96968509337461 0 0 0 chimp,human,macaque,marmoset,orangutan,panda,rabbit, processed_transcript processed_transcript A549@0.115585,AG04450@0,BJ@0.053141,GM12878@0.160963,H1HESC@2.05154,HELAS3@0.0314395,HEPG2@0.0499115,HMEC@0.008054,HSMM@0,HUVEC@0.223852,K562@0.0461455,MCF7@0.245351,NHEK@0.337253,NHLF@0.0071085,SKNSHRA@0.0813505, 0 0 0 0 ENSG00000250801.1 ENST00000509329.1 chr5:175399614-175406411 3 345 6448 intronic -1.40 0 0,0,0 0 0,0,0 0 0 0 0 0 0 0 0 0 0 1 chimp,human,orangutan, antisense antisense A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0.015175,NHLF@0,SKNSHRA@0, 187 2 0 0 ENSG00000250801.1 ENST00000502354.1 chr5:175399618-175412859 2 545 12694 intronic -2.23 0 0,0,0 0 0,0,0 0 0 0 0 0 0 0 0 0 0 0 chimp,dog,human,orangutan, antisense antisense A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0.015175,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000250801.1 ENST00000511796.1 chr5:175399625-175406239 2 399 6213 intronic -2.23 0 0,0,0 0 0,0,0 0 0 0 0 0 0 0 0 0 0 0 cat,chimp,cow,dog,horse,human,orangutan,panda, antisense antisense A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0.015175,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000250992.1 ENST00000509643.1 chr5:175467747-175469881 2 682 1450 intergenic -8.08 1 0,0,0 0 0,0,0 0 0 0 0 0 0 69.7067448680352 13.2944827586207 65.23 0 1 chimp,human,macaque,orangutan, antisense antisense A549@0,AG04450@0,BJ@0,GM12878@0.031058,H1HESC@0.0036175,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0.0215445,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000251458.1 ENST00000504629.1 chr5:175551213-175558464 2 352 6897 intergenic -1.24 0 0,0,0 0 0,0,0 0 0 0 0 0 0 46.7073863636364 160.46034507757 138.948 0 0 chimp,horse,human,macaque,orangutan, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0.013876,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000251623.1 ENST00000510029.1 chr5:175564160-175582741 5 915 17658 intergenic 4.45 1 0,1,0 0 0,0,0 0 0 0 0 6.95979159587722 0 0 22.8819232076113 0 0 0 chimp,horse,human,macaque,marmoset,orangutan,rabbit, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000248596.1 ENST00000515403.1 chr5:175570088-175612158 23 3609 38417 intergenic 6.55 1 1,1,1 0 0,0,0 0 0 0 25.9866999168745 2.46677252258115 0 48.9221390967027 4.82109482781061 0 0 1 chimp,human,macaque,orangutan, lincRNA processed_transcript A549@0.0738785,AG04450@0.012589,BJ@0.0045495,GM12878@0.041583,H1HESC@0.074013,HELAS3@0.099819,HEPG2@0.247349,HMEC@0.021914,HSMM@0.074564,HUVEC@0.003633,K562@5.62251,MCF7@0.189177,NHEK@0.051022,NHLF@0.040293,SKNSHRA@0.118118, 0 0 0 0 ENSG00000248596.1 ENST00000513919.1 chr5:175570453-175575050 6 729 3858 intergenic 1.23 0 0,0,0 0 0,0,0 0 0 0 44.2318244170096 11.763089683774 22.444 134.244170096022 31.9885951270088 29.448 1 1 chimp,human,macaque,marmoset,orangutan, lincRNA processed_transcript A549@0.0738785,AG04450@0.012589,BJ@0.0045495,GM12878@0.041583,H1HESC@0.074013,HELAS3@0.099819,HEPG2@0.247349,HMEC@0.021914,HSMM@0.074564,HUVEC@0.003633,K562@5.62251,MCF7@0.189177,NHEK@0.051022,NHLF@0.040293,SKNSHRA@0.118118, 0 0 0 0 ENSG00000248596.1 ENST00000503307.1 chr5:175585887-175595041 2 687 8465 intergenic -0.28 0 0,0,0 0 0,0,0 0 0 0 1.44395924308588 0.146485528647372 11.205 1.5080058224163 0.152982870643828 26.164 0 0 chimp,dog,elephant,human,rat, lincRNA retained_intron A549@0.0738785,AG04450@0.012589,BJ@0.0045495,GM12878@0.041583,H1HESC@0.074013,HELAS3@0.099819,HEPG2@0.247349,HMEC@0.021914,HSMM@0.074564,HUVEC@0.003633,K562@5.62251,MCF7@0.189177,NHEK@0.051022,NHLF@0.040293,SKNSHRA@0.118118, 0 0 0 0 ENSG00000248596.1 ENST00000508056.1 chr5:175600355-175626298 13 1592 24327 intergenic 6.72 1 0,0,1 0 0,0,0 0 0 0 0 0 0 0 21.3003247420561 0 0 1 chimp,human, lincRNA processed_transcript A549@0.0738785,AG04450@0.012589,BJ@0.0045495,GM12878@0.041583,H1HESC@0.074013,HELAS3@0.099819,HEPG2@0.247349,HMEC@0.021914,HSMM@0.074564,HUVEC@0.003633,K562@5.62251,MCF7@0.189177,NHEK@0.051022,NHLF@0.040293,SKNSHRA@0.118118, 0 0 0 0 ENSG00000248596.1 ENST00000510155.1 chr5:175600356-175602396 3 541 1495 intergenic 3.87 1 0,1,1 0 0,0,0 0 0 0 0 0 0 0 0 0 1 1 chimp,human,macaque,marmoset,orangutan, lincRNA processed_transcript A549@0.0738785,AG04450@0.012589,BJ@0.0045495,GM12878@0.041583,H1HESC@0.074013,HELAS3@0.099819,HEPG2@0.247349,HMEC@0.021914,HSMM@0.074564,HUVEC@0.003633,K562@5.62251,MCF7@0.189177,NHEK@0.051022,NHLF@0.040293,SKNSHRA@0.118118, 0 0 0 0 ENSG00000248596.1 ENST00000512260.1 chr5:175603523-175612183 4 530 8124 intergenic 6.98 0 0,1,0 0 0,0,0 0 0 0 0 0 0 0 0 0 1 1 chimp,human,macaque,marmoset,orangutan, lincRNA retained_intron A549@0.0738785,AG04450@0.012589,BJ@0.0045495,GM12878@0.041583,H1HESC@0.074013,HELAS3@0.099819,HEPG2@0.247349,HMEC@0.021914,HSMM@0.074564,HUVEC@0.003633,K562@5.62251,MCF7@0.189177,NHEK@0.051022,NHLF@0.040293,SKNSHRA@0.118118, 0 0 0 0 ENSG00000248596.1 ENST00000510850.1 chr5:175607010-175612159 4 544 4599 intergenic -0.46 0 0,1,0 0 0,0,0 0 0 0 0 0 0 0 0 0 0 0 chimp,cow,human,macaque,marmoset,orangutan, lincRNA retained_intron A549@0.0738785,AG04450@0.012589,BJ@0.0045495,GM12878@0.041583,H1HESC@0.074013,HELAS3@0.099819,HEPG2@0.247349,HMEC@0.021914,HSMM@0.074564,HUVEC@0.003633,K562@5.62251,MCF7@0.189177,NHEK@0.051022,NHLF@0.040293,SKNSHRA@0.118118, 0 0 0 0 ENSG00000250909.1 ENST00000508187.1 chr5:175774944-175780587 3 501 5138 exonic -6.17 1 0,0,0 0 0,0,0 0 22.3641494745037 12.079 95.0419161676647 33.7380303620086 68.119 119.602794411178 34.5295834955236 108.783 0 0 chimp,cow,dog,horse,human,marmoset,panda, antisense antisense A549@0.012172,AG04450@0.0293695,BJ@0.045624,GM12878@0.0058025,H1HESC@0.0346465,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0.0211935,K562@0.032065,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000251414.1 ENST00000512934.1 chr5:175781209-175783171 2 526 1434 intronic -0.27 0 0,0,0 0 0,0,0 0 68.0836820083682 0 0 81.2426778242678 0 0 78.0627615062762 0 0 0 cat,chimp,elephant,horse,human,macaque,marmoset,orangutan,pig, antisense antisense A549@0.0052315,AG04450@0.0229275,BJ@0,GM12878@0.020117,H1HESC@0,HELAS3@0.0237165,HEPG2@0.053678,HMEC@0,HSMM@0,HUVEC@0.0056365,K562@0.020283,MCF7@0.0077015,NHEK@0,NHLF@0,SKNSHRA@0.149623, 0 0 0 0 ENSG00000248484.1 ENST00000507236.1 chr5:176134357-176153244 2 576 18309 intergenic 5.52 0 0,1,0 0 0,0,0 0 11.5194166803212 0 110.677083333333 14.0777759571795 19.8 121.352430555556 15.1494347042438 21.3 0 0 chimp,cow,dog,horse,human,macaque,marmoset,orangutan,panda,rabbit, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000251446.1 ENST00000512245.1 chr5:176153943-176166459 4 549 11961 intergenic 3.58 0 0,1,0 0 0,0,0 23.6520947176685 25.2366022907784 9.02 26.2258652094718 20.9994983697015 29.424 26.1657559198543 21.8277735975253 43.387 1 1 chimp,human,macaque,marmoset,orangutan, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000248859.1 ENST00000512115.1 chr5:176170206-176170803 2 489 106 intergenic 3.71 1 0,0,0 0 0,0,0 66.6462167689162 167.292452830189 0 184.799591002045 204.981132075472 1.61 163.854805725971 217.415094339623 1.701 0 0 cat,chimp,cow,dog,elephant,guinea_pig,horse,human,macaque,marmoset,mouse,opossum,orangutan,panda,pig,rabbit,rat, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0.29177,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000251666.1 ENST00000515264.1 chr5:176478715-176479964 2 743 504 intronic -1.57 0 0,0,1 0 0,0,0 0 0 110.916 0 0 402.855 24.749663526245 0 103.362 0 1 chimp,human,marmoset,orangutan, sense_intronic sense_intronic A549@0.186787,AG04450@0.158881,BJ@0.102838,GM12878@0.806383,H1HESC@0.314825,HELAS3@0.55116,HEPG2@0.251882,HMEC@0,HSMM@0.0264055,HUVEC@0.174089,K562@1.02721,MCF7@0.204521,NHEK@0.124405,NHLF@0.059814,SKNSHRA@0.158283, 0 0 0 0 ENSG00000246334.2 ENST00000425316.3 chr5:176865504-176874700 4 737 8453 intronic 3.40 0 0,0,0 0 0,0,0 0 64.0637643440199 165.239 6.58344640434193 90.1315509286644 98.341 6.62143826322931 79.0340707441145 107.341 0 0 horse,human,macaque,marmoset,orangutan, lincRNA processed_transcript A549@1.09086,AG04450@0,BJ@0.0263125,GM12878@0.179435,H1HESC@0.382023,HELAS3@2.92987,HEPG2@5.25385,HMEC@0.158783,HSMM@0.152011,HUVEC@0.004016,K562@0.0704695,MCF7@1.05147,NHEK@0.101106,NHLF@0.003887,SKNSHRA@0.500073, 0 0 0 0 ENSG00000246334.2 ENST00000514846.1 chr5:176869804-176871581 3 540 1233 exonic 1.64 0 0,0,1 0 0,0,0 78.962962962963 0 0 135.918518518519 0 0 131.77037037037 1.18248175182482 0 0 0 chimp,cow,dog,elephant,guinea_pig,human,macaque,marmoset,orangutan, lincRNA processed_transcript A549@1.09086,AG04450@0,BJ@0.0263125,GM12878@0.179435,H1HESC@0.382023,HELAS3@2.92987,HEPG2@5.25385,HMEC@0.158783,HSMM@0.152011,HUVEC@0.004016,K562@0.0704695,MCF7@1.05147,NHEK@0.101106,NHLF@0.003887,SKNSHRA@0.500073, 0 0 0 0 ENSG00000246334.2 ENST00000511565.1 chr5:176870068-176871478 2 500 908 intergenic 1.75 0 0,0,1 0 0,0,0 0 0 0 0 0 4.852 0 1.6057268722467 4.88 0 0 cat,chimp,cow,dog,elephant,guinea_pig,human,macaque,marmoset,orangutan,panda,rabbit, lincRNA processed_transcript A549@1.09086,AG04450@0,BJ@0.0263125,GM12878@0.179435,H1HESC@0.382023,HELAS3@2.92987,HEPG2@5.25385,HMEC@0.158783,HSMM@0.152011,HUVEC@0.004016,K562@0.0704695,MCF7@1.05147,NHEK@0.101106,NHLF@0.003887,SKNSHRA@0.500073, 0 0 0 0 ENSG00000246334.2 ENST00000506465.1 chr5:176872980-176874699 2 419 1298 intronic 3.15 0 0,0,1 0 0,0,0 0 115.592449922958 165.239 0 184.465331278891 98.341 0 148.786594761171 107.341 0 0 chimp,dog,elephant,human,macaque,marmoset,orangutan, lincRNA processed_transcript A549@1.09086,AG04450@0,BJ@0.0263125,GM12878@0.179435,H1HESC@0.382023,HELAS3@2.92987,HEPG2@5.25385,HMEC@0.158783,HSMM@0.152011,HUVEC@0.004016,K562@0.0704695,MCF7@1.05147,NHEK@0.101106,NHLF@0.003887,SKNSHRA@0.500073, 0 0 0 0 ENSG00000248342.1 ENST00000513271.1 chr5:176875053-176879142 2 3870 217 exonic 5.05 0 0,1,1 0 0,0,0 18.1937984496124 0 0 10.28165374677 0 0 46.0560723514212 516.069124423963 0 0 0 chimp,elephant,human,macaque,marmoset,orangutan, lincRNA lincRNA A549@0.276687,AG04450@0.08973,BJ@0.0149965,GM12878@0.427276,H1HESC@1.44949,HELAS3@1.66608,HEPG2@1.79225,HMEC@0.01692,HSMM@0.07152,HUVEC@0.068781,K562@0.472955,MCF7@0.929039,NHEK@0.0769783,NHLF@0,SKNSHRA@0.411782, 0 0 0 0 ENSG00000248996.1 ENST00000506025.1 chr5:176921996-176930648 2 432 8218 exonic 4.26 0 0,1,0 0 0,0,0 0 17.3567778048187 51.252 7.86111111111111 30.8594548551959 82.085 5.79166666666667 29.8469213920662 77.703 0 0 dog,human,marmoset, antisense antisense A549@0.029059,AG04450@0.0160175,BJ@0.111635,GM12878@0.029739,H1HESC@0.0432305,HELAS3@0.005385,HEPG2@0.0251405,HMEC@0.094346,HSMM@0.0157575,HUVEC@0.0782475,K562@0,MCF7@0.0047375,NHEK@0,NHLF@0.0178835,SKNSHRA@0, 0 0 0 0 ENSG00000247679.2 ENST00000499900.2 chr5:177038254-177046755 3 1748 6749 intergenic 9.44 1 0,0,1 0 0,0,0 22.1052631578947 0 0 7.50286041189931 0.318713883538302 5.09 8.09324942791762 0.324048007112165 6.365 0 1 chimp,human,orangutan, antisense antisense A549@0.842993,AG04450@0.62879,BJ@0.462398,GM12878@0.302577,H1HESC@0.572626,HELAS3@0.692609,HEPG2@0.55133,HMEC@0.367477,HSMM@0.480478,HUVEC@0.905288,K562@0.284131,MCF7@0.800882,NHEK@0.690904,NHLF@0.57248,SKNSHRA@1.56289, 0 0 0 0 ENSG00000249849.1 ENST00000509363.1 chr5:177109295-177140970 3 428 31243 exonic 0.34 0 0,0,1 0 0,0,0 0 0 0 0 0.134686169702013 0 0 15.971161540185 0 0 0 chimp,horse,human,macaque,marmoset,orangutan,rabbit, antisense antisense A549@0.0050365,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0.0407,HEPG2@0.0824055,HMEC@0,HSMM@0,HUVEC@0,K562@0.358818,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000248943.1 ENST00000515739.1 chr5:177228205-177230345 2 682 1456 intergenic -8.08 1 0,0,0 0 0,0,0 0 0 0 0 0 0 63.0410557184751 11.478021978022 58.845 0 1 chimp,human,macaque,orangutan, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0.0340385,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0.0215445,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000249704.1 ENST00000512861.1 chr5:177283141-177283894 2 502 249 intergenic -1.94 0 0,0,1 0 0,0,0 0 0 0 0 0 0 0 0 0 0 0 cat,chimp,dog,elephant,horse,human,macaque,marmoset,orangutan,panda,rabbit, processed_transcript processed_transcript A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0.044396,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000249186.1 ENST00000505248.1 chr5:177284946-177298191 2 545 12698 intergenic -2.23 0 0,0,0 0 0,0,0 0 0 0 8.77064220183486 0 0 9.21100917431193 0 0 0 0 chimp,cow,dog,human,orangutan, antisense antisense A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0.015175,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000249186.1 ENST00000504362.1 chr5:177291394-177298195 3 345 6452 intergenic -1.40 0 0,0,0 0 0,0,0 0 0 0 11.7768115942029 0.074085554866708 0 12.368115942029 0.0778053316800992 0 0 1 chimp,human,orangutan, antisense antisense A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0.015175,NHLF@0,SKNSHRA@0, 187 2 0 0 ENSG00000249186.1 ENST00000504214.1 chr5:177291566-177298184 2 399 6217 intergenic -2.23 0 0,0,0 0 0,0,0 0 0 0 11.9799498746867 0 0 12.5814536340852 0 0 0 0 cat,chimp,cow,dog,horse,human,orangutan,panda, antisense antisense A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0.015175,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000250963.1 ENST00000503449.1 chr5:177312261-177359278 2 566 46449 intergenic 0 0 0,0,0 0 0,0,0 0 1.33673491356111 0 0 6.52560873215785 6.072 0 8.68223212555706 6.116 0 0 chimp,human,macaque,marmoset,orangutan,panda,rabbit, processed_transcript processed_transcript A549@0.134904,AG04450@0,BJ@0.0416235,GM12878@0.185327,H1HESC@2.06374,HELAS3@0.042048,HEPG2@0.0553455,HMEC@0,HSMM@0,HUVEC@0.268668,K562@0.055112,MCF7@0.28919,NHEK@0.382567,NHLF@0.006667,SKNSHRA@0.0932675, 0 0 0 0 ENSG00000250101.1 ENST00000511650.1 chr5:177366623-177410055 2 545 42885 intergenic 1.47 0 0,1,0 0 0,0,0 0 0 0 0 0.572694415296724 0 0 90.7226302903113 0 1 1 chimp,human,macaque,marmoset,orangutan, processed_transcript processed_transcript A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0.013898,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000249684.1 ENST00000502514.1 chr5:177377336-177384751 3 610 6801 intergenic 2.29 1 0,1,1 0 0,1,0 0 0 0 0 0 0 154.686885245902 55.4112630495515 0 1 1 chimp,human,macaque,marmoset,orangutan, processed_transcript processed_transcript A549@1.0772,AG04450@1.29979,BJ@0.118555,GM12878@0.146878,H1HESC@0.752655,HELAS3@0.0227405,HEPG2@0.30084,HMEC@0.532631,HSMM@0.459139,HUVEC@0.171924,K562@0.355899,MCF7@0.603866,NHEK@0.298619,NHLF@1.16094,SKNSHRA@0.417206, 0 0 0 0 ENSG00000249684.1 ENST00000507072.1 chr5:177378414-177390961 4 547 11994 intergenic -2.09 1 0,0,1 0 0,1,0 0 0 0 0 0 0 257.539305301645 34.5228447557112 242.18 0 1 chimp,human,macaque,orangutan, processed_transcript processed_transcript A549@1.0772,AG04450@1.29979,BJ@0.118555,GM12878@0.146878,H1HESC@0.752655,HELAS3@0.0227405,HEPG2@0.30084,HMEC@0.532631,HSMM@0.459139,HUVEC@0.171924,K562@0.355899,MCF7@0.603866,NHEK@0.298619,NHLF@1.16094,SKNSHRA@0.417206, 0 0 0 0 ENSG00000249684.1 ENST00000366189.3 chr5:177378949-177387150 3 508 7689 intergenic -21.76 0 0,0,1 0 0,1,0 0 0 0 0 0 0 0 0 337.534 0 1 chimp,human,macaque,orangutan, processed_transcript processed_transcript A549@1.0772,AG04450@1.29979,BJ@0.118555,GM12878@0.146878,H1HESC@0.752655,HELAS3@0.0227405,HEPG2@0.30084,HMEC@0.532631,HSMM@0.459139,HUVEC@0.171924,K562@0.355899,MCF7@0.603866,NHEK@0.298619,NHLF@1.16094,SKNSHRA@0.417206, 0 0 0 0 ENSG00000249684.1 ENST00000503263.1 chr5:177380166-177384760 2 277 4315 intergenic 2.29 1 0,1,1 0 0,1,0 0 0 0 0 0 0 0 0 0 0 1 chimp,human,macaque,orangutan, processed_transcript processed_transcript A549@1.0772,AG04450@1.29979,BJ@0.118555,GM12878@0.146878,H1HESC@0.752655,HELAS3@0.0227405,HEPG2@0.30084,HMEC@0.532631,HSMM@0.459139,HUVEC@0.171924,K562@0.355899,MCF7@0.603866,NHEK@0.298619,NHLF@1.16094,SKNSHRA@0.417206, 0 0 0 0 ENSG00000255684.1 ENST00000535495.1 chr5:177433441-177446907 2 491 12973 exonic 6.76 0 0,0,0 0 0,0,0 0 0 0 0 0 0 256.737270875764 17.2449703229785 39.935 1 1 chimp,human,macaque,marmoset,orangutan, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0.005456, 0 0 0 0 ENSG00000253698.1 ENST00000521803.1 chr5:177777868-177779251 2 664 717 intronic 4.60 0 0,0,1 0 0,0,0 0 0 0 0 0 0 0 0 0 1 1 chimp,human,macaque,marmoset,orangutan, antisense antisense A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0.0174795,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0.0068455,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0.0677325, 0 0 0 0 ENSG00000245688.1 ENST00000501834.1 chr5:177865682-177870095 2 1456 2955 intronic 2.86 0 0,0,0 0 0,0,0 6.63186813186813 2.47546531302876 0 10.4539835164835 0.623011844331641 10.212 10.1188186813187 0.896785109983079 14.45 0 0 chimp,dog,elephant,horse,human,macaque,marmoset,orangutan,pig, sense_intronic sense_intronic A549@0,AG04450@0,BJ@0,GM12878@0.081106,H1HESC@0.239166,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0.0103615,NHEK@0.00672133,NHLF@0,SKNSHRA@0.10366, 0 0 0 0 ENSG00000253718.1 ENST00000367003.4 chr5:178107232-178366360 2 356 258770 encompassing -5.48 0 0,0,0 0 0,0,0 0 7.94340534065 0 0 13.3214282953975 0 11.9859550561798 20.6552614290683 0 1 1 chimp,human,macaque,marmoset,orangutan, processed_transcript processed_transcript A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000248595.1 ENST00000513038.1 chr5:178365678-178368084 2 2285 119 intergenic 4.00 0 0,1,0 0 0,0,0 0 0 0 4.072647702407 0 15.262 6.89584245076586 0 15.434 1 1 chimp,human,macaque,marmoset,orangutan, lincRNA lincRNA A549@0,AG04450@0.0020595,BJ@0.003129,GM12878@0,H1HESC@0.0401465,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0.011087,HUVEC@0.0021265,K562@0,MCF7@0,NHEK@0,NHLF@0.009556,SKNSHRA@0.0972795, 0 0 0 0 ENSG00000254035.1 ENST00000519491.1 chr5:178396391-178417117 2 672 20052 exonic 5.01 1 0,0,0 0 0,0,0 0 16.8795132655097 0 0 33.1971374426491 0 0 39.7413225613405 0 0 0 chimp,horse,human,macaque,marmoset,orangutan,panda, antisense antisense A549@0,AG04450@0.300433,BJ@0.0606365,GM12878@0,H1HESC@0.243478,HELAS3@0.024772,HEPG2@0,HMEC@0.006075,HSMM@0.477033,HUVEC@0,K562@0,MCF7@0,NHEK@0.0232373,NHLF@0.048989,SKNSHRA@0.641926, 0 0 0 0 ENSG00000253979.1 ENST00000520163.1 chr5:178804506-178805866 2 358 1000 intergenic 1.31 0 0,0,0 0 0,0,0 0 0 0 7.83519553072626 0 11.355 7.95810055865922 0 11.443 0 0 chimp,human,macaque,marmoset,orangutan,panda, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000253163.1 ENST00000519603.1 chr5:178804532-178805762 2 622 606 intergenic 4.94 1 0,0,0 0 0,0,0 0 0 0 0 0 0 0 0 0 0 0 cat,chimp,cow,guinea_pig,horse,human,macaque,orangutan, lincRNA lincRNA A549@0,AG04450@0.018977,BJ@0.287347,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0.0043715,HMEC@0,HSMM@0.973453,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0.0061845,SKNSHRA@0, 0 0 0 0 ENSG00000250674.1 ENST00000503218.1 chr5:178882416-178883096 2 559 119 intergenic 3.50 0 0,0,0 0 0,0,0 0 0 0 0 0 3.968 162.159212880143 228.756302521008 4.016 0 1 chimp,human,macaque, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000253652.1 ENST00000520758.1 chr5:178930323-178942580 2 533 11722 intergenic 7.42 1 0,0,0 0 0,0,0 0 0 0 0 0.196212250469203 0 0 0.920747312745265 0 0 0 chimp,human,macaque,marmoset,orangutan,rabbit, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0.0092505,HELAS3@0,HEPG2@0.0039825,HMEC@0,HSMM@0,HUVEC@0.004545,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000244945.1 ENST00000500262.1 chr5:179022905-179030742 9 1957 5864 exonic 5.49 0 0,0,0 0 0,0,0 0 2.27285129604366 0 1.3030148185999 16.7032742155525 0 2.98364844149208 28.3611869031378 0 0 1 human,marmoset, antisense antisense A549@0.151718,AG04450@0.200598,BJ@0.246814,GM12878@0.024412,H1HESC@0.130737,HELAS3@0.188581,HEPG2@0.181623,HMEC@0.056233,HSMM@0.073017,HUVEC@0.211614,K562@0.015896,MCF7@0.268807,NHEK@0.126504,NHLF@0.092712,SKNSHRA@0.096956, 0 0 0 0 ENSG00000250999.1 ENST00000508188.1 chr5:179084763-179085482 2 427 290 intergenic 5.99 0 0,1,0 0 0,0,0 0 0 0 0 0 0 0 0 0 0 1 human,macaque,marmoset,orangutan, antisense antisense A549@0.0830565,AG04450@0.150872,BJ@0.28733,GM12878@0.100521,H1HESC@0.153736,HELAS3@0.145504,HEPG2@0.135933,HMEC@0.051321,HSMM@0.0477375,HUVEC@0.350475,K562@0.134704,MCF7@0.199125,NHEK@0.056863,NHLF@0.0554655,SKNSHRA@0.2074, 0 0 0 0 ENSG00000250999.1 ENST00000514793.1 chr5:179085237-179091433 3 482 5710 intergenic -2.44 1 1,1,1 0 0,0,0 0 0 0 0 0 0 0 0 0 0 1 human,macaque,marmoset,orangutan, antisense antisense A549@0.0830565,AG04450@0.150872,BJ@0.28733,GM12878@0.100521,H1HESC@0.153736,HELAS3@0.145504,HEPG2@0.135933,HMEC@0.051321,HSMM@0.0477375,HUVEC@0.350475,K562@0.134704,MCF7@0.199125,NHEK@0.056863,NHLF@0.0554655,SKNSHRA@0.2074, 0 0 0 0 ENSG00000250999.1 ENST00000503428.1 chr5:179085266-179091431 2 323 5840 intergenic -8.48 1 1,1,1 0 0,0,0 0 0 0 0 0 0 0 0 0 0 1 chimp,human,marmoset,orangutan, antisense antisense A549@0.0830565,AG04450@0.150872,BJ@0.28733,GM12878@0.100521,H1HESC@0.153736,HELAS3@0.145504,HEPG2@0.135933,HMEC@0.051321,HSMM@0.0477375,HUVEC@0.350475,K562@0.134704,MCF7@0.199125,NHEK@0.056863,NHLF@0.0554655,SKNSHRA@0.2074, 0 0 0 0 ENSG00000249412.1 ENST00000510240.1 chr5:179390615-179391419 2 567 235 intronic -1.03 0 0,0,1 0 0,0,0 111.634920634921 101.293617021277 102.249 147.333333333333 158.017021276596 136.336 151.873015873016 166.565957446809 124.928 0 0 cat,chimp,cow,dog,elephant,guinea_pig,horse,human,macaque,marmoset,orangutan,pig,rabbit, antisense antisense A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000248367.1 ENST00000504573.1 chr5:179720245-179722253 2 391 1615 intergenic -12.12 1 1,1,1 1 0,0,0 0 5.98142414860681 0 0 2.80371517027864 0 0 2.86315789473684 0 1 1 chimp,human,macaque,marmoset,orangutan, antisense antisense A549@0.299243,AG04450@0.031307,BJ@0.061897,GM12878@0.336054,H1HESC@0.195757,HELAS3@0.400438,HEPG2@0.14752,HMEC@0.031257,HSMM@0.0052355,HUVEC@0.0632185,K562@0.392919,MCF7@1.03412,NHEK@0.03297,NHLF@0.014839,SKNSHRA@0.205544, 0 0 0 0 ENSG00000250509.1 ENST00000507681.1 chr5:179868559-179870238 2 804 873 intergenic 2.92 0 0,0,1 0 0,0,0 0 0 0 3.08457711442786 0 0 12.5907960199005 0 0 0 1 chimp,human,macaque,orangutan, lincRNA lincRNA A549@2.18508,AG04450@0,BJ@0,GM12878@0.302161,H1HESC@0,HELAS3@4.94324,HEPG2@0.0609175,HMEC@0,HSMM@0.0056565,HUVEC@0,K562@0.0088085,MCF7@0.004989,NHEK@0.003276,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000248717.1 ENST00000513535.1 chr5:180111766-180113546 2 1037 741 intergenic -6.63 1 0,0,0 0 0,0,0 0 0 0 0 0 0 0 0 0 0 0 chimp,elephant,human,marmoset,orangutan,rabbit, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000249705.2 ENST00000545462.1 chr5:180256956-180258618 2 1420 240 intergenic 12.38 1 1,1,1 1 0,0,0 0 0 0 0 0 0 0 0 0 0 1 chimp,human,macaque,orangutan, lincRNA lincRNA A549@14.0435,AG04450@4.40899,BJ@12.3027,GM12878@8.46425,H1HESC@5.70053,HELAS3@6.96683,HEPG2@0.52674,HMEC@4.87866,HSMM@7.00711,HUVEC@9.21458,K562@7.35826,MCF7@7.41457,NHEK@2.68484,NHLF@6.53293,SKNSHRA@10.4516, 0 0 0 0 ENSG00000245060.2 ENST00000501855.2 chr5:180257957-180262726 3 1868 2897 intergenic 0.85 1 1,1,1 1 0,0,0 0 0 0 0 2.55747324818778 0 0 2.77148774594408 0 0 1 human,macaque,marmoset,orangutan, lincRNA processed_transcript A549@3.02127,AG04450@2.37934,BJ@2.99078,GM12878@5.66889,H1HESC@1.07657,HELAS3@1.50073,HEPG2@0.141546,HMEC@0.657761,HSMM@1.51018,HUVEC@1.63218,K562@5.28928,MCF7@4.4574,NHEK@1.93992,NHLF@1.97101,SKNSHRA@4.19986, 0 0 0 0 ENSG00000245060.2 ENST00000502162.2 chr5:180258024-180262726 3 1806 2892 intergenic 0.58 1 1,1,1 1 0,0,0 0 0 0 0 2.5618948824343 0 0 2.77627939142462 0 0 1 human,macaque,marmoset,orangutan, lincRNA processed_transcript A549@3.02127,AG04450@2.37934,BJ@2.99078,GM12878@5.66889,H1HESC@1.07657,HELAS3@1.50073,HEPG2@0.141546,HMEC@0.657761,HSMM@1.51018,HUVEC@1.63218,K562@5.28928,MCF7@4.4574,NHEK@1.93992,NHLF@1.97101,SKNSHRA@4.19986, 0 0 0 0 ENSG00000245060.2 ENST00000508309.1 chr5:180258027-180261779 2 669 3081 intergenic -2.02 0 0,1,1 1 0,0,0 0 0 0 0 2.40473872119442 0 0 2.60597208698475 0 1 1 chimp,human,macaque,marmoset,orangutan, lincRNA processed_transcript A549@3.02127,AG04450@2.37934,BJ@2.99078,GM12878@5.66889,H1HESC@1.07657,HELAS3@1.50073,HEPG2@0.141546,HMEC@0.657761,HSMM@1.51018,HUVEC@1.63218,K562@5.28928,MCF7@4.4574,NHEK@1.93992,NHLF@1.97101,SKNSHRA@4.19986, 0 0 0 0 ENSG00000245060.2 ENST00000509921.1 chr5:180258039-180261871 3 819 3009 intergenic -2.02 0 0,1,1 1 0,0,0 0 0 0 0 2.46227982718511 0 0 2.66832834828847 0 0 1 human,macaque,marmoset,orangutan, lincRNA processed_transcript A549@3.02127,AG04450@2.37934,BJ@2.99078,GM12878@5.66889,H1HESC@1.07657,HELAS3@1.50073,HEPG2@0.141546,HMEC@0.657761,HSMM@1.51018,HUVEC@1.63218,K562@5.28928,MCF7@4.4574,NHEK@1.93992,NHLF@1.97101,SKNSHRA@4.19986, 0 0 0 0 ENSG00000245060.2 ENST00000501937.2 chr5:180258365-180262678 2 1807 2504 intergenic 5.76 1 0,1,1 0 0,0,0 0 0 0 0 2.95886581469649 0 0 3.2064696485623 0 0 1 human,macaque,marmoset,orangutan, lincRNA processed_transcript A549@3.02127,AG04450@2.37934,BJ@2.99078,GM12878@5.66889,H1HESC@1.07657,HELAS3@1.50073,HEPG2@0.141546,HMEC@0.657761,HSMM@1.51018,HUVEC@1.63218,K562@5.28928,MCF7@4.4574,NHEK@1.93992,NHLF@1.97101,SKNSHRA@4.19986, 0 0 0 0 ENSG00000248473.1 ENST00000513771.1 chr5:180618046-180618852 2 409 395 intergenic 11.34 0 0,1,1 0 0,0,0 13.0268948655257 46.3670886075949 0 25.8337408312958 67.8075949367089 0 28.479217603912 68.3544303797468 0 1 1 chimp,human,macaque,marmoset,orangutan, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0.004905,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0.011299,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000250222.1 ENST00000514487.1 chr5:180618924-180621429 2 287 2216 exonic 0 1 1,1,1 0 0,0,0 0 0 23.976 0 1.15072202166065 37.846 0 1.19584837545126 39.148 0 1 chimp,human,orangutan, antisense antisense A549@0.284248,AG04450@0.0995225,BJ@0.136632,GM12878@0.245486,H1HESC@0.0189375,HELAS3@0.110755,HEPG2@0.0275215,HMEC@0.052227,HSMM@0.0333725,HUVEC@0.0212165,K562@0.366121,MCF7@0.0831685,NHEK@0.10271,NHLF@0.0596305,SKNSHRA@0.368907, 0 0 0 0 ENSG00000250222.1 ENST00000508877.1 chr5:180619070-180621428 3 389 1965 exonic 2.36 1 1,1,1 1 0,0,0 0 0 23.976 0 1.29770992366412 37.846 0 1.34860050890585 39.148 1 1 chimp,human,macaque,marmoset,orangutan, antisense antisense A549@0.284248,AG04450@0.0995225,BJ@0.136632,GM12878@0.245486,H1HESC@0.0189375,HELAS3@0.110755,HEPG2@0.0275215,HMEC@0.052227,HSMM@0.0333725,HUVEC@0.0212165,K562@0.366121,MCF7@0.0831685,NHEK@0.10271,NHLF@0.0596305,SKNSHRA@0.368907, 0 0 0 0 ENSG00000250900.2 ENST00000512508.1 chr5:180622496-180626977 3 497 3980 exonic 15.18 0 0,1,1 0 0,0,0 62.8571428571429 11.3766331658291 142.56 208.798792756539 26.6050251256281 129.54 222.941649899396 28.7015075376884 123.098 0 0 cat,chimp,cow,dog,guinea_pig,human,macaque,mouse,panda,platypus,rabbit, antisense antisense A549@0.0454975,AG04450@0.005921,BJ@0.009075,GM12878@0.0399615,H1HESC@0.0183555,HELAS3@0.096711,HEPG2@0.0283865,HMEC@0.007023,HSMM@0,HUVEC@0.0102095,K562@0.102893,MCF7@0.0070535,NHEK@0.0336337,NHLF@0.003347,SKNSHRA@0.024277, 0 0 0 0 ENSG00000250900.2 ENST00000509080.1 chr5:180625200-180630103 2 591 4310 exonic -2.50 1 0,1,1 0 0,0,0 0 17.5218097447796 0 16.4906937394247 38.7199535962877 8.86 17.5329949238579 43.0561484918794 9.42 1 1 chimp,human,macaque,marmoset,orangutan, antisense antisense A549@0.0454975,AG04450@0.005921,BJ@0.009075,GM12878@0.0399615,H1HESC@0.0183555,HELAS3@0.096711,HEPG2@0.0283865,HMEC@0.007023,HSMM@0,HUVEC@0.0102095,K562@0.102893,MCF7@0.0070535,NHEK@0.0336337,NHLF@0.003347,SKNSHRA@0.024277, 0 0 0 0 ENSG00000250900.2 ENST00000502812.2 chr5:180625202-180630100 2 581 4315 exonic -2.50 1 0,1,1 0 0,0,0 0 17.501506373117 0 15.249569707401 38.6750869061414 9.746 16.2134251290878 43.0062572421784 10.362 1 1 chimp,human,macaque,marmoset,orangutan, antisense antisense A549@0.0454975,AG04450@0.005921,BJ@0.009075,GM12878@0.0399615,H1HESC@0.0183555,HELAS3@0.096711,HEPG2@0.0283865,HMEC@0.007023,HSMM@0,HUVEC@0.0102095,K562@0.102893,MCF7@0.0070535,NHEK@0.0336337,NHLF@0.003347,SKNSHRA@0.024277, 0 0 0 0 ENSG00000250900.2 ENST00000511517.1 chr5:180626368-180630101 2 736 2995 intronic -2.50 1 0,0,1 0 0,0,0 0 10.0968280467446 45.279 0 28.2243739565943 82.351 0 32.3168614357262 88.783 0 1 chimp,human,macaque,orangutan, antisense antisense A549@0.0454975,AG04450@0.005921,BJ@0.009075,GM12878@0.0399615,H1HESC@0.0183555,HELAS3@0.096711,HEPG2@0.0283865,HMEC@0.007023,HSMM@0,HUVEC@0.0102095,K562@0.102893,MCF7@0.0070535,NHEK@0.0336337,NHLF@0.003347,SKNSHRA@0.024277, 1 96 0 0 ENSG00000250900.2 ENST00000419707.2 chr5:180626373-180629305 2 323 2607 intronic -10.65 0 0,0,0 0 0,0,0 0 11.5995397008055 45.279 0 32.4250095895666 82.351 0 37.126582278481 88.783 0 0 cat,chimp,dog,horse,human,macaque,marmoset,orangutan,rabbit, antisense antisense A549@0.0454975,AG04450@0.005921,BJ@0.009075,GM12878@0.0399615,H1HESC@0.0183555,HELAS3@0.096711,HEPG2@0.0283865,HMEC@0.007023,HSMM@0,HUVEC@0.0102095,K562@0.102893,MCF7@0.0070535,NHEK@0.0336337,NHLF@0.003347,SKNSHRA@0.024277, 0 0 0 0 ENSG00000250900.2 ENST00000514784.1 chr5:180627913-180630103 2 618 1570 exonic -2.50 1 0,1,1 0 0,0,0 0 0 30.24 0 0 58.632 0 0 69.367 0 1 chimp,human,macaque,orangutan, antisense antisense A549@0.0454975,AG04450@0.005921,BJ@0.009075,GM12878@0.0399615,H1HESC@0.0183555,HELAS3@0.096711,HEPG2@0.0283865,HMEC@0.007023,HSMM@0,HUVEC@0.0102095,K562@0.102893,MCF7@0.0070535,NHEK@0.0336337,NHLF@0.003347,SKNSHRA@0.024277, 0 0 0 0 ENSG00000248514.1 ENST00000503314.1 chr5:180632361-180633120 2 454 303 intergenic 9.10 0 0,1,0 1 0,0,0 0 0 0 17 0 36.288 11.8568281938326 0 35.568 0 0 cat,chimp,cow,dog,human,macaque,marmoset,mouse,orangutan,panda,rabbit, antisense antisense A549@0.0190405,AG04450@0,BJ@0.016013,GM12878@0.014701,H1HESC@0,HELAS3@0.080474,HEPG2@0.0095425,HMEC@0,HSMM@0,HUVEC@0,K562@0.005092,MCF7@0.004509,NHEK@0.151255,NHLF@0.0085105,SKNSHRA@0.0696835, 0 0 0 0 ENSG00000247049.2 ENST00000499096.2 chr5:180651646-180657685 2 564 5473 exonic 0.64 0 0,0,1 0 0,0,0 110.581560283688 0 0 164.397163120567 0.98556550338023 63.298 143.66134751773 1.50539009683903 61.282 0 0 cat,chimp,cow,dog,elephant,guinea_pig,horse,human,macaque,marmoset,orangutan,panda,rabbit, antisense antisense A549@0.00488,AG04450@0,BJ@0.0126425,GM12878@0.007123,H1HESC@0.010501,HELAS3@0.129053,HEPG2@0.051502,HMEC@0,HSMM@0,HUVEC@0,K562@0.0082045,MCF7@0.0145305,NHEK@0.00232733,NHLF@0,SKNSHRA@0.035714, 0 0 0 0 ENSG00000233937.2 ENST00000511331.1 chr5:180673523-180699168 4 996 24643 exonic -4.19 0 0,1,0 1 0,0,0 0 4.15651503469545 0 0 12.4247859432699 0 0 16.4660146897699 0 1 1 chimp,human,macaque,marmoset,orangutan, antisense antisense A549@1.48083,AG04450@0.772453,BJ@0.745867,GM12878@2.95886,H1HESC@2.63948,HELAS3@4.54307,HEPG2@5.78721,HMEC@0.94328,HSMM@0.967659,HUVEC@1.04537,K562@7.33775,MCF7@2.20761,NHEK@0.827661,NHLF@1.76237,SKNSHRA@2.46467, 0 0 0 0 ENSG00000233937.2 ENST00000506340.1 chr5:180673525-180684245 3 684 10032 exonic -4.19 0 0,1,1 1 0,1,0 0 6.99740829346092 0 28.7529239766082 17.7096291866029 0 29.0526315789474 20.4946172248804 0 0 0 chimp,cow,elephant,horse,human,macaque,marmoset,orangutan, antisense antisense A549@1.48083,AG04450@0.772453,BJ@0.745867,GM12878@2.95886,H1HESC@2.63948,HELAS3@4.54307,HEPG2@5.78721,HMEC@0.94328,HSMM@0.967659,HUVEC@1.04537,K562@7.33775,MCF7@2.20761,NHEK@0.827661,NHLF@1.76237,SKNSHRA@2.46467, 0 0 0 0 ENSG00000233937.2 ENST00000505151.1 chr5:180673901-180684587 2 884 9800 exonic -3.75 0 0,0,1 0 0,1,0 10.3800904977376 7.1630612244898 0 30.9694570135747 18.1288775510204 0 40.7579185520362 20.9797959183673 0 0 0 cow,human,macaque,orangutan, antisense antisense A549@1.48083,AG04450@0.772453,BJ@0.745867,GM12878@2.95886,H1HESC@2.63948,HELAS3@4.54307,HEPG2@5.78721,HMEC@0.94328,HSMM@0.967659,HUVEC@1.04537,K562@7.33775,MCF7@2.20761,NHEK@0.827661,NHLF@1.76237,SKNSHRA@2.46467, 0 0 0 0 ENSG00000233937.2 ENST00000417281.2 chr5:180674701-180684587 2 627 9257 exonic -11.61 0 0,0,1 0 0,1,0 14.6347687400319 7.58323430917144 0 43.6634768740032 19.192286918008 0 57.4641148325359 22.2104353462245 0 0 0 cow,dog,human,macaque,marmoset,orangutan,panda,rabbit, antisense antisense A549@1.48083,AG04450@0.772453,BJ@0.745867,GM12878@2.95886,H1HESC@2.63948,HELAS3@4.54307,HEPG2@5.78721,HMEC@0.94328,HSMM@0.967659,HUVEC@1.04537,K562@7.33775,MCF7@2.20761,NHEK@0.827661,NHLF@1.76237,SKNSHRA@2.46467, 0 0 0 0 ENSG00000248275.1 ENST00000514146.1 chr5:180688213-180691262 2 805 2242 intergenic -6.93 0 1,1,1 1 0,0,0 0 0 0 0 5.22346119536128 41.392 0 5.66057091882248 78.843 0 1 chimp,human,macaque,orangutan, antisense antisense A549@3.64193,AG04450@1.16778,BJ@2.15071,GM12878@1.18919,H1HESC@4.65548,HELAS3@2.80341,HEPG2@4.83937,HMEC@1.37408,HSMM@1.80003,HUVEC@5.35159,K562@3.22612,MCF7@2.71547,NHEK@0.72423,NHLF@1.01278,SKNSHRA@3.51281, 0 0 0 0 ENSG00000248275.1 ENST00000507434.1 chr5:180688223-180699308 3 669 10412 intergenic -22.94 1 1,1,1 1 0,0,0 0 0 0 0 1.12475989243181 40.236 0 1.2188820591625 74.953 0 0 chimp,cow,elephant,human,macaque,marmoset,orangutan,pig,rabbit, antisense antisense A549@3.64193,AG04450@1.16778,BJ@2.15071,GM12878@1.18919,H1HESC@4.65548,HELAS3@2.80341,HEPG2@4.83937,HMEC@1.37408,HSMM@1.80003,HUVEC@5.35159,K562@3.22612,MCF7@2.71547,NHEK@0.72423,NHLF@1.01278,SKNSHRA@3.51281, 0 0 0 0 ENSG00000248275.1 ENST00000509252.1 chr5:180688225-180691258 3 526 2503 intergenic -7.84 0 1,1,1 1 0,0,0 0 0 0 0 4.67878545745106 40.236 0 5.07031562125449 74.175 0 1 chimp,human,macaque,orangutan, antisense antisense A549@3.64193,AG04450@1.16778,BJ@2.15071,GM12878@1.18919,H1HESC@4.65548,HELAS3@2.80341,HEPG2@4.83937,HMEC@1.37408,HSMM@1.80003,HUVEC@5.35159,K562@3.22612,MCF7@2.71547,NHEK@0.72423,NHLF@1.01278,SKNSHRA@3.51281, 0 0 0 0 ENSG00000248275.1 ENST00000433265.3 chr5:180690635-180691230 2 309 284 intergenic -14.48 0 0,0,1 0 0,0,0 0 0 0 0 0 0 0 0 0 0 1 chimp,human,macaque,orangutan, antisense antisense A549@3.64193,AG04450@1.16778,BJ@2.15071,GM12878@1.18919,H1HESC@4.65548,HELAS3@2.80341,HEPG2@4.83937,HMEC@1.37408,HSMM@1.80003,HUVEC@5.35159,K562@3.22612,MCF7@2.71547,NHEK@0.72423,NHLF@1.01278,SKNSHRA@3.51281, 0 0 0 0 ENSG00000248103.1 ENST00000412295.2 chr5:180708376-180710653 2 547 1728 intergenic 4.15 0 0,1,1 1 0,0,0 0 0 0 0 0 0 0 0 0 1 1 chimp,human,macaque,marmoset,orangutan, lincRNA lincRNA A549@0.003954,AG04450@0.0680965,BJ@0.0879615,GM12878@0.070774,H1HESC@3.72825,HELAS3@0.176936,HEPG2@0.430102,HMEC@0,HSMM@0.013877,HUVEC@0.21808,K562@4.63733,MCF7@0.207854,NHEK@0.005874,NHLF@0.0140585,SKNSHRA@9.71805, 0 0 0 0 ENSG00000170590.4 ENST00000436899.1 chr6:131910-144885 3 724 12247 intergenic 4.00 0 0,0,0 0 0,0,0 0 0 0 0 2.78558014207561 0 176.412983425414 110.905119621132 0 0 0 chimp,cow,dog,elephant,human,macaque,mouse,orangutan, lincRNA lincRNA A549@0.11404,AG04450@0.084367,BJ@0.146592,GM12878@0.290612,H1HESC@0.178368,HELAS3@0.323296,HEPG2@0.33221,HMEC@0.028161,HSMM@0.108129,HUVEC@0.510889,K562@0.247852,MCF7@0.296842,NHEK@0.182401,NHLF@0.122806,SKNSHRA@0.559476, 5 7 2 7 ENSG00000234823.1 ENST00000458006.1 chr6:155135-156639 3 748 752 intergenic -0.46 0 0,0,0 0 0,0,0 0 0 0 0 0 0 0 0 0 0 0 chimp,human,macaque,marmoset,orangutan, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0.003121,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000224179.1 ENST00000441203.1 chr6:224950-226400 3 841 605 intergenic 5.96 0 0,0,1 0 0,0,0 0 0 0 0 0 0 0 0 0 0 0 chimp,human,macaque,marmoset,orangutan, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0.185371,H1HESC@0,HELAS3@0.009891,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0.14911,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000230433.1 ENST00000430842.1 chr6:524171-525581 2 849 559 intronic -1.66 0 0,0,0 0 0,0,0 0 0 0 0 0 3.107 0 0 13.435 0 0 chimp,horse,human,macaque,marmoset,orangutan, antisense antisense A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0.0130705, 0 0 0 0 ENSG00000229796.1 ENST00000434292.1 chr6:958563-962511 2 401 3545 intergenic -3.83 0 0,1,0 0 0,0,0 0 0 0 4.94763092269327 258.915937940762 0 5.0074812967581 262.979407616361 0 0 0 chimp,horse,human,macaque,marmoset,orangutan, lincRNA lincRNA A549@0,AG04450@0,BJ@0.017756,GM12878@0,H1HESC@0,HELAS3@0.047037,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000246005.1 ENST00000500716.1 chr6:2244111-2245808 2 1274 421 exonic 3.90 0 1,1,1 0 0,0,0 2.1978021978022 58.4916864608076 0 0 103.760095011876 0 0 105.125890736342 0 0 0 chimp,human,macaque,marmoset,orangutan,panda, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0.0196275,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0.0015755,NHEK@0,NHLF@0,SKNSHRA@0.0043585, 0 0 0 0 ENSG00000250903.2 ENST00000530346.1 chr6:2245982-2399235 4 590 152657 intergenic -0.68 0 0,1,0 1 0,0,0 0 8.31549814289551 41.145 0 9.84887034331869 43.683 3.29491525423729 11.9215430671374 47.25 0 0 chimp,horse,human,macaque,marmoset,orangutan, lincRNA processed_transcript A549@2.43554,AG04450@3.49181,BJ@3.46946,GM12878@3.96688,H1HESC@2.47541,HELAS3@8.97433,HEPG2@10.1954,HMEC@0.36231,HSMM@2.96243,HUVEC@3.10152,K562@2.77471,MCF7@1.64244,NHEK@0.631898,NHLF@1.45408,SKNSHRA@5.72917, 0 0 0 0 ENSG00000250903.2 ENST00000524770.1 chr6:2246002-2397580 5 560 151010 intergenic -0.51 0 1,1,1 1 0,0,0 0 8.40619164293756 41.145 46.5535714285714 9.74179855638699 43.683 59.7857142857143 11.7216674392424 49.194 0 0 chimp,guinea_pig,human,macaque,marmoset,orangutan,rat, lincRNA processed_transcript A549@2.43554,AG04450@3.49181,BJ@3.46946,GM12878@3.96688,H1HESC@2.47541,HELAS3@8.97433,HEPG2@10.1954,HMEC@0.36231,HSMM@2.96243,HUVEC@3.10152,K562@2.77471,MCF7@1.64244,NHEK@0.631898,NHLF@1.45408,SKNSHRA@5.72917, 0 0 0 0 ENSG00000250903.2 ENST00000532124.1 chr6:2246002-2399000 5 624 152366 intergenic -0.51 0 0,1,0 1 0,0,0 0 8.33137970413347 41.145 0 9.86768045364451 43.683 0 11.9443117230878 49.194 0 0 chimp,horse,human,macaque,marmoset,orangutan, lincRNA processed_transcript A549@2.43554,AG04450@3.49181,BJ@3.46946,GM12878@3.96688,H1HESC@2.47541,HELAS3@8.97433,HEPG2@10.1954,HMEC@0.36231,HSMM@2.96243,HUVEC@3.10152,K562@2.77471,MCF7@1.64244,NHEK@0.631898,NHLF@1.45408,SKNSHRA@5.72917, 0 0 0 0 ENSG00000250903.2 ENST00000531092.1 chr6:2246005-2398898 4 740 152147 intergenic 4.25 0 0,1,1 1 0,0,0 0 8.34337187062512 41.145 43.3581081081081 9.66899774560129 43.683 62.6824324324324 11.654498609897 49.194 0 0 cow,guinea_pig,horse,human,macaque,marmoset,mouse,panda, lincRNA processed_transcript A549@2.43554,AG04450@3.49181,BJ@3.46946,GM12878@3.96688,H1HESC@2.47541,HELAS3@8.97433,HEPG2@10.1954,HMEC@0.36231,HSMM@2.96243,HUVEC@3.10152,K562@2.77471,MCF7@1.64244,NHEK@0.631898,NHLF@1.45408,SKNSHRA@5.72917, 0 0 0 0 ENSG00000250903.2 ENST00000456943.2 chr6:2246011-2284008 6 2302 35685 intergenic 5.70 1 1,1,1 1 0,0,0 0 4.52711223203027 41.145 0 5.1632058287796 43.683 0 6.43844752697212 49.194 0 1 chimp,human,marmoset, lincRNA processed_transcript A549@2.43554,AG04450@3.49181,BJ@3.46946,GM12878@3.96688,H1HESC@2.47541,HELAS3@8.97433,HEPG2@10.1954,HMEC@0.36231,HSMM@2.96243,HUVEC@3.10152,K562@2.77471,MCF7@1.64244,NHEK@0.631898,NHLF@1.45408,SKNSHRA@5.72917, 0 0 0 0 ENSG00000250903.2 ENST00000529893.1 chr6:2246016-2398981 5 895 152062 intergenic 4.25 0 0,1,0 1 0,0,0 0 8.34803566966106 41.145 35.8491620111732 9.67440254632978 43.683 51.8268156424581 11.6610132709027 49.194 0 0 chimp,human,macaque,marmoset,mouse,orangutan,panda, lincRNA processed_transcript A549@2.43554,AG04450@3.49181,BJ@3.46946,GM12878@3.96688,H1HESC@2.47541,HELAS3@8.97433,HEPG2@10.1954,HMEC@0.36231,HSMM@2.96243,HUVEC@3.10152,K562@2.77471,MCF7@1.64244,NHEK@0.631898,NHLF@1.45408,SKNSHRA@5.72917, 0 0 0 0 ENSG00000250903.2 ENST00000530833.1 chr6:2246059-2264362 3 721 17578 intergenic -0.51 0 0,1,0 1 0,0,0 0 9.1904653544203 41.145 0 5.72710205939242 43.683 0 5.72147001934236 49.194 1 1 chimp,human,macaque,marmoset,orangutan, lincRNA processed_transcript A549@2.43554,AG04450@3.49181,BJ@3.46946,GM12878@3.96688,H1HESC@2.47541,HELAS3@8.97433,HEPG2@10.1954,HMEC@0.36231,HSMM@2.96243,HUVEC@3.10152,K562@2.77471,MCF7@1.64244,NHEK@0.631898,NHLF@1.45408,SKNSHRA@5.72917, 0 0 0 0 ENSG00000250903.2 ENST00000525811.1 chr6:2246075-2284007 4 535 37391 intergenic -0.51 1 1,1,1 1 0,0,0 0 4.32055842314996 41.145 0 4.9276296434971 43.683 0 6.14468722419834 49.194 0 1 chimp,human, lincRNA processed_transcript A549@2.43554,AG04450@3.49181,BJ@3.46946,GM12878@3.96688,H1HESC@2.47541,HELAS3@8.97433,HEPG2@10.1954,HMEC@0.36231,HSMM@2.96243,HUVEC@3.10152,K562@2.77471,MCF7@1.64244,NHEK@0.631898,NHLF@1.45408,SKNSHRA@5.72917, 0 0 0 0 ENSG00000250903.2 ENST00000534441.1 chr6:2246076-2413064 7 731 166245 intergenic -0.51 0 0,1,0 1 0,0,0 0 8.97145778820416 41.145 4.92065663474692 9.89402388041746 43.683 5.20656634746922 11.9057234804054 49.194 0 0 chimp,human,macaque,marmoset,orangutan,panda, lincRNA processed_transcript A549@2.43554,AG04450@3.49181,BJ@3.46946,GM12878@3.96688,H1HESC@2.47541,HELAS3@8.97433,HEPG2@10.1954,HMEC@0.36231,HSMM@2.96243,HUVEC@3.10152,K562@2.77471,MCF7@1.64244,NHEK@0.631898,NHLF@1.45408,SKNSHRA@5.72917, 0 0 0 0 ENSG00000250903.2 ENST00000533653.1 chr6:2246087-2270247 4 564 23590 intergenic -0.51 0 1,1,1 1 0,0,0 0 6.84824077999152 41.145 0 6.1900805426028 43.683 0 7.1072488342518 49.194 1 1 chimp,human,macaque,marmoset,orangutan, lincRNA processed_transcript A549@2.43554,AG04450@3.49181,BJ@3.46946,GM12878@3.96688,H1HESC@2.47541,HELAS3@8.97433,HEPG2@10.1954,HMEC@0.36231,HSMM@2.96243,HUVEC@3.10152,K562@2.77471,MCF7@1.64244,NHEK@0.631898,NHLF@1.45408,SKNSHRA@5.72917, 0 0 0 0 ENSG00000250903.2 ENST00000534468.1 chr6:2246089-2367549 5 719 120733 intergenic -0.51 0 0,1,0 1 0,0,0 29.4631432545202 4.78689339285862 41.145 11.5493741307371 5.70957401870243 43.683 18.9554937413074 7.45233697497784 49.194 1 1 chimp,human,macaque,marmoset,orangutan, lincRNA processed_transcript A549@2.43554,AG04450@3.49181,BJ@3.46946,GM12878@3.96688,H1HESC@2.47541,HELAS3@8.97433,HEPG2@10.1954,HMEC@0.36231,HSMM@2.96243,HUVEC@3.10152,K562@2.77471,MCF7@1.64244,NHEK@0.631898,NHLF@1.45408,SKNSHRA@5.72917, 0 0 0 0 ENSG00000250903.2 ENST00000534160.1 chr6:2306527-2352936 3 717 45688 intergenic -0.00 0 0,0,1 0 0,0,0 0 5.19350814218175 0 0 8.15498599194537 0 0 11.0560978812817 0 1 1 chimp,human,macaque,marmoset,orangutan, lincRNA processed_transcript A549@2.43554,AG04450@3.49181,BJ@3.46946,GM12878@3.96688,H1HESC@2.47541,HELAS3@8.97433,HEPG2@10.1954,HMEC@0.36231,HSMM@2.96243,HUVEC@3.10152,K562@2.77471,MCF7@1.64244,NHEK@0.631898,NHLF@1.45408,SKNSHRA@5.72917, 0 0 0 0 ENSG00000250903.2 ENST00000505870.1 chr6:2391780-2413825 3 8214 13827 intergenic 4.25 1 0,1,1 0 0,0,0 31.9494765035306 16.0585087148333 0 49.8288288288288 10.2215231069646 0 54.2734355977599 11.5252766326752 0 0 1 chimp,human,macaque,orangutan, lincRNA processed_transcript A549@2.43554,AG04450@3.49181,BJ@3.46946,GM12878@3.96688,H1HESC@2.47541,HELAS3@8.97433,HEPG2@10.1954,HMEC@0.36231,HSMM@2.96243,HUVEC@3.10152,K562@2.77471,MCF7@1.64244,NHEK@0.631898,NHLF@1.45408,SKNSHRA@5.72917, 0 0 0 0 ENSG00000250903.2 ENST00000532564.1 chr6:2398809-2413782 3 1435 13534 intergenic -1.66 1 0,0,1 0 0,0,0 62.2912891986063 16.4061622580168 0 125.112891986063 10.1500664991872 3.315 127.924041811847 11.4260381262007 6.8 0 0 chimp,dog,elephant,guinea_pig,horse,human,macaque,marmoset,orangutan,panda,rabbit, lincRNA processed_transcript A549@2.43554,AG04450@3.49181,BJ@3.46946,GM12878@3.96688,H1HESC@2.47541,HELAS3@8.97433,HEPG2@10.1954,HMEC@0.36231,HSMM@2.96243,HUVEC@3.10152,K562@2.77471,MCF7@1.64244,NHEK@0.631898,NHLF@1.45408,SKNSHRA@5.72917, 0 0 0 0 ENSG00000228718.1 ENST00000440848.1 chr6:2637170-2640235 2 832 2231 intergenic 0.89 0 0,0,0 0 0,0,0 0 0 0 0 0 0 0 0 0 0 0 chimp,human,macaque,marmoset,orangutan, lincRNA lincRNA A549@0.0464575,AG04450@0,BJ@0,GM12878@0,H1HESC@0.014835,HELAS3@0.255943,HEPG2@0.019624,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0.0024105,NHEK@0,NHLF@0,SKNSHRA@0.002725, 0 0 0 0 ENSG00000230438.3 ENST00000420981.1 chr6:2854891-2876744 3 1585 20264 intergenic 3.78 1 1,1,1 1 0,0,0 0 0 0 0 0.251677852348993 0 16.1804416403786 0.473006316620608 0 0 0 chimp,human,macaque, lincRNA lincRNA A549@0.263132,AG04450@0.225735,BJ@0.160853,GM12878@1.05086,H1HESC@0.436373,HELAS3@2.37267,HEPG2@0.725811,HMEC@0.003273,HSMM@0.170569,HUVEC@3.6652,K562@0.101968,MCF7@0.096197,NHEK@0.00105533,NHLF@0.0711595,SKNSHRA@0.29589, 0 0 0 0 ENSG00000230438.3 ENST00000545177.1 chr6:2854892-2876744 2 1249 20601 intergenic 3.78 1 1,1,1 1 0,0,0 0 0 0 0 0.247560798019514 0 20.533226581265 0.465268676277851 0 0 0 chimp,elephant,human,macaque,orangutan,panda, lincRNA lincRNA A549@0.263132,AG04450@0.225735,BJ@0.160853,GM12878@1.05086,H1HESC@0.436373,HELAS3@2.37267,HEPG2@0.725811,HMEC@0.003273,HSMM@0.170569,HUVEC@3.6652,K562@0.101968,MCF7@0.096197,NHEK@0.00105533,NHLF@0.0711595,SKNSHRA@0.29589, 0 0 0 0 ENSG00000228365.1 ENST00000437718.1 chr6:2917128-2917967 2 482 355 intergenic -2.53 1 0,0,0 0 0,0,0 0 0 0 0 0 0 0 0 0 0 0 chimp,human,macaque,marmoset,orangutan, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0.018039,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000224846.1 ENST00000456189.1 chr6:2989960-2998977 2 411 8604 intronic 4.87 1 0,1,1 0 0,0,0 0 0 0 0 0 0 0 0 0 0 0 chimp,human,orangutan, antisense antisense A549@0.01886,AG04450@0.005772,BJ@0.0358965,GM12878@0,H1HESC@0.033341,HELAS3@0.400407,HEPG2@0.131971,HMEC@0,HSMM@0.005587,HUVEC@0.0178785,K562@0.321104,MCF7@0,NHEK@0.0158747,NHLF@0,SKNSHRA@0.0410085, 0 0 0 0 ENSG00000224846.1 ENST00000429319.1 chr6:2989960-2999368 2 406 9000 intronic 4.87 1 1,1,1 1 0,0,0 0 0 0 0 0 0 0 0 0 0 0 chimp,human,orangutan, antisense antisense A549@0.01886,AG04450@0.005772,BJ@0.0358965,GM12878@0,H1HESC@0.033341,HELAS3@0.400407,HEPG2@0.131971,HMEC@0,HSMM@0.005587,HUVEC@0.0178785,K562@0.321104,MCF7@0,NHEK@0.0158747,NHLF@0,SKNSHRA@0.0410085, 0 0 0 0 ENSG00000233763.1 ENST00000423062.1 chr6:3051335-3052317 2 270 710 intergenic 0 0 0,0,0 0 0,0,0 0 0 0 0 0 0 0 0 0 0 0 chimp,horse,human,macaque,marmoset,orangutan,pig, antisense antisense A549@0,AG04450@0.0086585,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0.0256985,K562@0.028312,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000233763.1 ENST00000455327.1 chr6:3051335-3053987 2 333 2317 intergenic 0 0 0,1,0 0 0,0,0 0 0 0 0 0 0 0 0 0 0 0 chimp,human,macaque,marmoset,orangutan, antisense antisense A549@0,AG04450@0.0086585,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0.0256985,K562@0.028312,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000233763.1 ENST00000423429.1 chr6:3052197-3053998 2 314 1485 intergenic 0 0 0,1,0 0 0,0,0 0 0 0 0 0 0 0 0 0 0 0 chimp,human,marmoset,orangutan,pig, antisense antisense A549@0,AG04450@0.0086585,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0.0256985,K562@0.028312,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000229282.1 ENST00000433761.1 chr6:3056124-3056995 2 396 473 intergenic 0 0 0,0,0 0 0,0,0 0 0 0 0 0 0 0 0 0 0 0 chimp,human,macaque,orangutan, lincRNA lincRNA A549@0.0279925,AG04450@0,BJ@0,GM12878@0,H1HESC@0.198473,HELAS3@0.0104875,HEPG2@0.0405865,HMEC@0,HSMM@0,HUVEC@0,K562@0.098068,MCF7@0,NHEK@0,NHLF@0.0049025,SKNSHRA@0.0621805, 0 0 0 0 ENSG00000228170.1 ENST00000447644.1 chr6:3138628-3153296 2 693 13973 exonic -0.52 0 0,1,0 0 0,0,0 30.6493506493507 2.81564445716739 203.381 19.1630591630592 5.11765547842267 177.139 38.2640692640693 56.1943748658126 153.029 0 0 chimp,human,macaque,marmoset,orangutan, antisense antisense A549@0.0553665,AG04450@0.123069,BJ@0.210797,GM12878@0.0084155,H1HESC@0.051135,HELAS3@0.0747775,HEPG2@0.094507,HMEC@0,HSMM@0.0053835,HUVEC@0.0034985,K562@0.167982,MCF7@0,NHEK@0.0462857,NHLF@0.0140065,SKNSHRA@0.071888, 0 0 0 0 ENSG00000230269.1 ENST00000425384.1 chr6:3182978-3195981 3 1467 11532 intergenic 0.26 0 1,1,1 0 0,0,0 0 7.81807145334721 0 0 2.50685050294832 3.224 14.6584867075665 2.70143947277142 3.445 0 0 chimp,horse,human,macaque,orangutan, lincRNA lincRNA A549@0.0334455,AG04450@0,BJ@0.001675,GM12878@0.0207385,H1HESC@0.474996,HELAS3@0.983766,HEPG2@7.47018,HMEC@0,HSMM@0,HUVEC@0.014606,K562@1.32116,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0.050832, 0 0 0 0 ENSG00000230269.1 ENST00000435043.1 chr6:3182978-3195990 3 1503 11505 intergenic 1.56 0 1,1,1 0 0,0,0 0 7.83641894828336 0 0 2.51273359408953 3.224 14.3073852295409 2.70777922642329 3.445 0 0 cat,chimp,horse,human,macaque,orangutan, lincRNA lincRNA A549@0.0334455,AG04450@0,BJ@0.001675,GM12878@0.0207385,H1HESC@0.474996,HELAS3@0.983766,HEPG2@7.47018,HMEC@0,HSMM@0,HUVEC@0.014606,K562@1.32116,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0.050832, 0 0 0 0 ENSG00000228793.1 ENST00000443445.1 chr6:3594481-3624981 3 786 29710 intergenic 1.19 0 0,0,1 0 0,0,0 0 4.88916189835072 0 0 3.58067990575564 0 0 4.39239313362504 0 0 0 horse,human,macaque,orangutan, lincRNA lincRNA A549@0,AG04450@0.00597,BJ@0.021523,GM12878@0,H1HESC@0.0557105,HELAS3@0.0330535,HEPG2@0.040133,HMEC@0.00519,HSMM@0.0052155,HUVEC@0.007544,K562@0.0520705,MCF7@0,NHEK@0,NHLF@0.0049185,SKNSHRA@0.011512, 0 0 0 0 ENSG00000238158.1 ENST00000454396.1 chr6:3832169-3857093 3 648 24272 encompassing 0.68 0 0,0,1 0 0,0,0 0 14.8930042847726 0 0.445987654320988 12.0479976928148 4.952 0.445987654320988 18.0417353328939 4.936 0 0 chimp,human,macaque,marmoset,orangutan, processed_transcript processed_transcript A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0.0086055,HMEC@0,HSMM@0,HUVEC@0,K562@0.0041125,MCF7@0.001984,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000233068.1 ENST00000450255.1 chr6:3893360-3894524 3 438 722 intergenic -4.21 1 0,0,0 0 0,0,0 0 0 0 0 0 0 0 0 0 0 0 chimp,human,macaque,marmoset,orangutan, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0.0058845,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000233068.1 ENST00000445883.1 chr6:3894074-3894524 1 450 0 intergenic -16.00 1 0,0,0 0 0,0,0 0 0 0 0 0 0 0 0 0 0 0 cat,chimp,guinea_pig,horse,human,macaque,marmoset,orangutan,rabbit, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0.0058845,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000230648.1 ENST00000415144.1 chr6:4019077-4021449 2 207 2163 intergenic 0 0 0,1,1 1 0,0,0 0 0 122.03 0 0 91.73 0 0 94.846 0 0 cat,chimp,human,macaque,marmoset,orangutan, antisense antisense A549@0.067975,AG04450@0.239777,BJ@0.139748,GM12878@0.344227,H1HESC@0.121167,HELAS3@0.121181,HEPG2@0.149082,HMEC@0,HSMM@0.222961,HUVEC@0.200671,K562@2.21649,MCF7@0.359849,NHEK@0.186012,NHLF@0.074583,SKNSHRA@0.966936, 0 0 0 0 ENSG00000254821.1 ENST00000527831.1 chr6:4135657-4146287 2 638 9990 exonic 3.51 1 0,1,0 0 0,0,0 0 0 0 2.62225705329154 0.781081081081081 0 2.75391849529781 1.37067067067067 0 0 0 chimp,horse,human,macaque,marmoset,orangutan, antisense antisense A549@0.013804,AG04450@0,BJ@0.034825,GM12878@0.0335585,H1HESC@0.0086125,HELAS3@0.0333495,HEPG2@0.044259,HMEC@0,HSMM@0,HUVEC@0.004333,K562@0.0386395,MCF7@0.019186,NHEK@0.007205,NHLF@0,SKNSHRA@0.0219125, 0 0 0 0 ENSG00000234817.2 ENST00000427049.2 chr6:4136306-4157619 4 2273 19034 intergenic 7.00 0 0,1,1 0 0,0,0 4.04751429828421 0 0 0 0.522958915624672 1.673 0.930488341399032 0.838079226647053 1.757 0 0 cat,chimp,human,macaque,marmoset,orangutan, lincRNA processed_transcript A549@0.039851,AG04450@0.0219795,BJ@0.0603065,GM12878@0.0469795,H1HESC@0.0039665,HELAS3@0.263914,HEPG2@0.1033,HMEC@0.023377,HSMM@0.0343835,HUVEC@0.0673795,K562@0.0472785,MCF7@0.0124815,NHEK@0.032885,NHLF@0.027326,SKNSHRA@0.132615, 0 0 0 0 ENSG00000237716.1 ENST00000427591.1 chr6:4186858-4188343 2 264 1219 intergenic 0 0 0,1,0 0 0,0,0 0 0 0 0 0 0 0 0 0 0 0 chimp,human,marmoset,orangutan,panda, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0.013139,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000229540.1 ENST00000428023.1 chr6:4226935-4227505 2 234 334 intergenic -5.32 0 0,0,0 0 0,0,0 0 0 0 0 0 0 0 0 0 0 0 NA lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000231811.1 ENST00000437430.1 chr6:4345977-4347271 3 328 962 intergenic 0.15 0 0,0,0 0 0,0,0 0 0 0 0 0 0 0 0 0 0 0 chimp,human,macaque,orangutan, lincRNA lincRNA A549@0.0166895,AG04450@0.0067715,BJ@0.014876,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0.0124325,HUVEC@0,K562@0,MCF7@0.0062115,NHEK@0.0316447,NHLF@0.0058295,SKNSHRA@0.0149925, 0 0 0 0 ENSG00000205444.2 ENST00000380106.2 chr6:4610890-4611538 2 482 164 intergenic -7.65 0 0,1,1 0 0,0,0 0 0 45.495 0 0 9.563 0 0 10.037 0 0 chimp,horse,human,macaque,marmoset,orangutan,panda, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0.139144,HUVEC@0.032392,K562@0,MCF7@0,NHEK@0,NHLF@0.01196,SKNSHRA@0.0111145, 0 0 0 0 ENSG00000236336.1 ENST00000436283.1 chr6:4774760-4775642 2 367 513 intronic -1.89 1 0,1,0 0 0,0,0 0 0 108.414 0 0 136.06 0 2.44639376218324 109.009 0 0 dog,horse,human,marmoset,orangutan,panda, antisense antisense A549@0.0370015,AG04450@0,BJ@0,GM12878@0,H1HESC@0.0402685,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0.005572,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000233064.1 ENST00000454882.1 chr6:5851739-5870453 3 409 18301 intergenic 1.59 0 1,1,1 0 0,0,0 0 9.07824709032293 0 0 8.45079503852248 21.137 4.75305623471883 8.74127096879952 15.399 0 0 human,macaque,orangutan,panda, lincRNA lincRNA A549@0.0119725,AG04450@0,BJ@0,GM12878@0.020368,H1HESC@0.32081,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0.0112715,MCF7@0,NHEK@0,NHLF@0.0189435,SKNSHRA@0, 0 0 0 0 ENSG00000230770.1 ENST00000444978.1 chr6:5875164-5876103 2 359 578 intergenic -15.53 0 0,0,1 0 0,0,0 0 0 0 0 0 0 0 0 0 0 0 chimp,horse,human,macaque,marmoset,orangutan, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0.0056995,HUVEC@0,K562@0,MCF7@0.0056955,NHEK@0,NHLF@0.005345,SKNSHRA@0, 0 0 0 0 ENSG00000251145.1 ENST00000510466.1 chr6:5892673-5986353 2 1355 92323 intergenic 3.32 0 0,0,0 0 0,0,0 0 11.8110221721565 0 0 7.24271308341367 0 0 19.2211583245778 0 0 0 elephant,horse,human,macaque,marmoset,rabbit, lincRNA lincRNA A549@0.0512285,AG04450@0.0108085,BJ@0.011745,GM12878@0.00299,H1HESC@0.090681,HELAS3@0.0091375,HEPG2@0.0316215,HMEC@0,HSMM@0.118437,HUVEC@0.0098395,K562@0.0176695,MCF7@0.069039,NHEK@0.00646367,NHLF@0.0337225,SKNSHRA@0.0689565, 0 0 0 0 ENSG00000216863.4 ENST00000429345.1 chr6:6346698-6622977 8 1933 274332 intronic 1.82 1 0,0,1 0 0,0,0 7.15571650284532 7.61497747255151 56.056 3.11174340403518 7.23315544668504 0 6.56699430936368 10.1347236195559 0 0 0 chimp,human,macaque,marmoset,orangutan, processed_transcript processed_transcript A549@0.0029445,AG04450@0.0016615,BJ@0,GM12878@2.85854,H1HESC@0,HELAS3@0,HEPG2@0.0009675,HMEC@0,HSMM@0.023388,HUVEC@0,K562@0,MCF7@0,NHEK@0.000680333,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000216863.4 ENST00000435641.1 chr6:6360824-6622928 7 2812 259280 intronic 1.82 0 0,0,0 0 0,0,0 0 7.49435359456958 70.252 4.29765291607397 7.05229095958037 2.43 4.54302987197724 10.0172400493675 2.502 0 0 chimp,dog,elephant,horse,human,macaque,marmoset,orangutan,panda,rabbit, processed_transcript processed_transcript A549@0.0029445,AG04450@0.0016615,BJ@0,GM12878@2.85854,H1HESC@0,HELAS3@0,HEPG2@0.0009675,HMEC@0,HSMM@0.023388,HUVEC@0,K562@0,MCF7@0,NHEK@0.000680333,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000216863.4 ENST00000447858.1 chr6:6366365-6587426 4 934 220121 intergenic 1.82 0 1,1,1 1 0,0,0 0 8.62382962098119 0 0 7.89457616492748 0 0 11.3790006405568 0 0 0 cat,chimp,cow,dog,elephant,guinea_pig,horse,human,macaque,marmoset,orangutan,panda,pig,rabbit, processed_transcript processed_transcript A549@0.0029445,AG04450@0.0016615,BJ@0,GM12878@2.85854,H1HESC@0,HELAS3@0,HEPG2@0.0009675,HMEC@0,HSMM@0.023388,HUVEC@0,K562@0,MCF7@0,NHEK@0.000680333,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000226281.1 ENST00000432823.1 chr6:6692977-6714208 3 895 20332 intergenic -1.02 0 0,1,1 0 0,0,0 0 3.23180208538265 0 0 3.17189651780445 0 0 4.01165650206571 0 0 0 horse,human,macaque,marmoset,orangutan, lincRNA lincRNA A549@0.014503,AG04450@0.0032965,BJ@0,GM12878@0,H1HESC@0.132175,HELAS3@0.0050325,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0.06662,MCF7@0.080808,NHEK@0.0158737,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000248940.1 ENST00000512967.1 chr6:6695027-6700720 2 2639 3052 intergenic -0.91 0 0,0,0 0 0,0,0 15.4956422887457 0 7.13 12.2417582417582 2.92889908256881 0 13.2538840469875 3.52064220183486 0 1 1 chimp,human,macaque,marmoset,orangutan, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0.0109455,HELAS3@0.349612,HEPG2@0.113776,HMEC@0,HSMM@0.0179805,HUVEC@0,K562@0.016619,MCF7@0.011419,NHEK@0.142213,NHLF@0.022764,SKNSHRA@0, 0 0 0 0 ENSG00000247225.1 ENST00000501751.1 chr6:6725119-6730139 2 1324 3694 intergenic 1.70 0 0,1,0 0 0,0,0 0 0 41.943 12.3889728096677 0 27.965 18.1918429003021 0 36.321 0 0 chimp,elephant,human,macaque,marmoset,orangutan, lincRNA lincRNA A549@0.0058175,AG04450@0.021648,BJ@0.02371,GM12878@0.007071,H1HESC@0.291885,HELAS3@0.086644,HEPG2@0.0253915,HMEC@0.006176,HSMM@0.0543875,HUVEC@0.0979185,K562@0.015226,MCF7@0.101238,NHEK@0.0183857,NHLF@0.0160885,SKNSHRA@0.0083885, 0 0 0 0 ENSG00000224532.1 ENST00000435429.1 chr6:6758511-6759524 2 386 625 intergenic -1.81 1 0,0,0 0 0,0,0 0 0 53.268 37.2746113989637 20.9904 58.138 54.2616580310881 20.7568 60.595 0 0 chimp,cow,dog,human,macaque,marmoset,mouse,opossum,orangutan,panda,rabbit,rat, lincRNA processed_transcript A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0.045956,HELAS3@0.0273605,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000223342.1 ENST00000422310.1 chr6:6901255-6918948 2 931 16760 intergenic -3.51 0 0,0,0 0 0,0,0 60.4672395273899 9.90519093078759 15.39 25.84425349087 12.0390214797136 0 26.1686358754028 14.061754176611 0 0 0 cat,chimp,dog,guinea_pig,human,macaque,marmoset,orangutan, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0.025729,HEPG2@0.005847,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0.0148267,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000203498.2 ENST00000423568.1 chr6:6993424-6995787 3 514 1845 intergenic -4.05 0 0,0,0 0 0,0,0 0 4.0780487804878 0 0 8.06937669376694 0 0 6.65311653116531 0 0 0 chimp,human,macaque,marmoset,orangutan, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000225092.1 ENST00000451355.1 chr6:7183316-7185520 2 1674 528 intronic 2.24 0 0,0,0 0 0,0,0 40.0346475507766 9.94318181818182 0.924 41.6499402628435 26.9185606060606 2.505 46.6505376344086 30.2026515151515 1.088 0 0 cat,chimp,dog,horse,human,macaque,marmoset,orangutan,panda, processed_transcript processed_transcript A549@0.689569,AG04450@0.578873,BJ@0.639766,GM12878@1.34708,H1HESC@0.259508,HELAS3@1.94204,HEPG2@2.04087,HMEC@0.027358,HSMM@0.372016,HUVEC@1.10384,K562@1.01847,MCF7@0.649609,NHEK@0.733531,NHLF@0.058571,SKNSHRA@0.159436, 0 0 0 0 ENSG00000238221.1 ENST00000379928.4 chr6:7276264-7299105 3 497 22340 exonic -0.52 0 0,0,1 0 0,0,0 99.2354124748491 30.0624888093107 0 108.040241448692 21.7345120859445 0 119.965794768612 23.2130707251567 0 0 0 cat,chimp,cow,dog,elephant,guinea_pig,horse,human,macaque,marmoset,mouse,opossum,orangutan,panda,rabbit,rat, antisense antisense A549@0.019731,AG04450@0.018386,BJ@0,GM12878@0,H1HESC@0.011641,HELAS3@0,HEPG2@0,HMEC@0.008189,HSMM@0,HUVEC@0,K562@0.0153535,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0.0181585, 0 0 0 0 ENSG00000232234.1 ENST00000439891.1 chr6:8328384-8342688 3 524 13776 intergenic -0.93 0 0,1,1 0 0,0,0 66.087786259542 16.599593495935 0 13.1049618320611 16.566274680604 1.912 15.2328244274809 20.0614111498258 1.944 0 0 chimp,cow,dog,elephant,horse,human,macaque,orangutan,panda,pig,rabbit, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0.0676695,HELAS3@0.008575,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0.00739333,NHLF@0,SKNSHRA@0.010553, 0 0 0 0 ENSG00000234763.1 ENST00000415575.1 chr6:8342170-8343254 2 744 338 intergenic 0 1 0,0,0 0 0,0,0 32.0564516129032 0 89.664 0 0 114.654 0 0 115.474 0 0 cat,chimp,cow,dog,elephant,horse,human,macaque,marmoset,orangutan,panda, lincRNA lincRNA A549@0.007405,AG04450@0,BJ@0,GM12878@0.006284,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0.005512,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000247276.1 ENST00000498984.1 chr6:8435926-8712519 4 2288 274299 intergenic 0.96 0 0,1,1 1 0,0,0 0.769230769230769 21.8202691223811 30.356 0 21.8246512017908 19.588 0 24.2799864381569 19.409 0 0 chimp,dog,elephant,human,macaque,marmoset,orangutan, lincRNA lincRNA A549@0.0421235,AG04450@0.046425,BJ@0.170651,GM12878@0.172004,H1HESC@0.0980595,HELAS3@0.108733,HEPG2@0.0959475,HMEC@0.044662,HSMM@0.036178,HUVEC@0.039475,K562@0.145563,MCF7@0.0699915,NHEK@0.115697,NHLF@0.0207845,SKNSHRA@0.0982585, 0 0 0 0 ENSG00000251164.1 ENST00000503668.1 chr6:8652370-8654079 2 554 1153 intergenic 6.38 1 0,0,1 0 0,0,0 0 0 179.708 0 0 118.222 0 0 117.749 0 0 chimp,elephant,human,macaque,marmoset,orangutan, lincRNA non_coding A549@0.0040955,AG04450@0.011525,BJ@0,GM12878@0.050898,H1HESC@0,HELAS3@0.016452,HEPG2@1.76159,HMEC@0,HSMM@0,HUVEC@0,K562@0.0132055,MCF7@0.022727,NHEK@0,NHLF@0.0018715,SKNSHRA@0.008759, 0 0 0 0 ENSG00000230939.1 ENST00000429060.1 chr6:8784411-8785678 2 487 778 intergenic -0.49 1 0,0,1 0 0,0,0 464.049281314168 248.854755784062 0 548.238193018481 272.893316195373 0 566.422997946612 278.181233933162 0 0 0 cat,chimp,cow,dog,elephant,horse,human,macaque,marmoset,mouse,opossum,orangutan,panda,pig,platypus,rabbit,rat, lincRNA lincRNA A549@0.022594,AG04450@0.083899,BJ@0.124579,GM12878@0.250877,H1HESC@0.0485,HELAS3@0.0092415,HEPG2@0.123659,HMEC@0.108855,HSMM@0.168973,HUVEC@0,K562@0.04858,MCF7@0.12502,NHEK@0.102618,NHLF@0.047616,SKNSHRA@0.0945895, 0 0 0 0 ENSG00000225775.1 ENST00000431369.1 chr6:9124454-9162010 3 658 36894 intergenic -6.43 1 0,0,1 0 0,0,0 52.7963525835866 21.8200791456605 0 11.1702127659574 18.6599176017781 0 7.08814589665653 23.0572721851792 0 0 0 cat,chimp,dog,elephant,guinea_pig,horse,human,macaque,marmoset,mouse,panda,pig,rabbit,rat, lincRNA lincRNA A549@0,AG04450@0.012004,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000229950.1 ENST00000420777.1 chr6:10409573-10416679 3 1572 5530 exonic -0.49 0 0,0,1 0 0,0,0 168.912849872774 156.694755877034 457.454 204.11641221374 237.770705244123 513.629 158.155852417303 230.286256781194 366.675 0 0 cat,chimp,elephant,human,macaque,marmoset,mouse,orangutan,panda,pig,rat, antisense antisense A549@0.358926,AG04450@0.0856925,BJ@0.560526,GM12878@0.268821,H1HESC@0,HELAS3@1.16942,HEPG2@0.404326,HMEC@0.257355,HSMM@0.0218135,HUVEC@0.0059425,K562@0.002942,MCF7@0.0442195,NHEK@0.242455,NHLF@0.0042405,SKNSHRA@0.0049865, 0 0 0 0 ENSG00000229950.1 ENST00000443546.1 chr6:10414811-10415955 2 908 234 exonic 0.75 0 1,1,1 0 0,0,0 156.600220264317 300.034188034188 0 224.263215859031 544.594017094017 9.187 171.794052863436 438.311965811966 17.323 0 0 chimp,cow,dog,elephant,guinea_pig,human,macaque,marmoset,mouse,opossum,orangutan,panda,pig,rabbit, antisense antisense A549@0.358926,AG04450@0.0856925,BJ@0.560526,GM12878@0.268821,H1HESC@0,HELAS3@1.16942,HEPG2@0.404326,HMEC@0.257355,HSMM@0.0218135,HUVEC@0.0059425,K562@0.002942,MCF7@0.0442195,NHEK@0.242455,NHLF@0.0042405,SKNSHRA@0.0049865, 0 0 0 0 ENSG00000228478.1 ENST00000420389.1 chr6:10423373-10426409 3 536 2496 intergenic 13.43 1 0,1,1 0 0,0,0 67.7723880597015 13.1338141025641 14.632 113.21828358209 18.3377403846154 14.659 87.7257462686567 17.7215544871795 14.108 0 0 cat,chimp,cow,dog,elephant,human,macaque,marmoset,mouse,orangutan,panda,pig,rabbit, lincRNA lincRNA A549@0.0250285,AG04450@0.0041585,BJ@0.006004,GM12878@0,H1HESC@0,HELAS3@0.042851,HEPG2@0.020243,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0.009165,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000183674.7 ENST00000496285.1 chr6:10429488-10435055 3 1545 4018 intergenic 0.38 1 0,0,1 0 0,1,0 25.4860841423948 21.3917371826779 11.711 21.9404530744337 3.22349427575908 11.956 25.1171521035599 6.10204081632653 7.628 0 1 chimp,human,orangutan, lincRNA processed_transcript A549@0.01367,AG04450@0,BJ@0.003794,GM12878@0,H1HESC@0.002432,HELAS3@0.120465,HEPG2@0.0095935,HMEC@0.711312,HSMM@0.008017,HUVEC@0,K562@0,MCF7@0.004025,NHEK@0.285301,NHLF@0,SKNSHRA@0.001468, 0 0 0 0 ENSG00000183674.7 ENST00000487130.1 chr6:10429781-10435107 2 997 4327 intergenic 0.38 1 0,0,0 0 0,1,0 39.4944834503511 19.8641090825052 11.711 34 2.99329789692628 11.956 38.9227683049147 5.6662814883291 7.628 0 0 chimp,cow,dog,horse,human,macaque,marmoset,orangutan,panda,pig, lincRNA processed_transcript A549@0.01367,AG04450@0,BJ@0.003794,GM12878@0,H1HESC@0.002432,HELAS3@0.120465,HEPG2@0.0095935,HMEC@0.711312,HSMM@0.008017,HUVEC@0,K562@0,MCF7@0.004025,NHEK@0.285301,NHLF@0,SKNSHRA@0.001468, 0 0 0 0 ENSG00000183674.7 ENST00000472178.1 chr6:10429942-10434728 2 851 3933 intergenic -7.25 0 1,1,1 0 0,1,0 46.2702702702703 21.8540554284261 11.711 37.3607520564042 3.2931604373252 11.956 40.1915393654524 6.23391812865497 7.628 0 0 cat,chimp,cow,dog,guinea_pig,horse,human,macaque,marmoset,orangutan,panda, lincRNA processed_transcript A549@0.01367,AG04450@0,BJ@0.003794,GM12878@0,H1HESC@0.002432,HELAS3@0.120465,HEPG2@0.0095935,HMEC@0.711312,HSMM@0.008017,HUVEC@0,K562@0,MCF7@0.004025,NHEK@0.285301,NHLF@0,SKNSHRA@0.001468, 0 0 0 0 ENSG00000183674.7 ENST00000479822.1 chr6:10429951-10435068 3 903 4210 intergenic 0.38 0 0,0,1 0 0,1,0 43.6057585825028 20.4161520190024 11.711 35.2093023255814 3.07648456057007 11.956 37.8770764119601 5.82375296912114 7.628 0 0 chimp,guinea_pig,human,orangutan, lincRNA processed_transcript A549@0.01367,AG04450@0,BJ@0.003794,GM12878@0,H1HESC@0.002432,HELAS3@0.120465,HEPG2@0.0095935,HMEC@0.711312,HSMM@0.008017,HUVEC@0,K562@0,MCF7@0.004025,NHEK@0.285301,NHLF@0,SKNSHRA@0.001468, 0 0 0 0 ENSG00000183674.7 ENST00000491317.1 chr6:10430029-10435050 4 1224 3791 intergenic 0.38 0 0,0,0 0 0,1,0 32.1699346405229 22.6726457399103 11.711 24.078431372549 3.41651279345819 11.956 25.5759803921569 6.46742284357689 7.628 0 1 chimp,human,orangutan, lincRNA processed_transcript A549@0.01367,AG04450@0,BJ@0.003794,GM12878@0,H1HESC@0.002432,HELAS3@0.120465,HEPG2@0.0095935,HMEC@0.711312,HSMM@0.008017,HUVEC@0,K562@0,MCF7@0.004025,NHEK@0.285301,NHLF@0,SKNSHRA@0.001468, 0 0 0 0 ENSG00000229401.1 ENST00000449333.1 chr6:10434549-10452480 2 432 17497 intergenic -5.43 0 0,1,0 0 0,0,0 0 9.96405098016803 17.16 0 4.83374292735898 5.52 0 7.55289478196262 5.68 0 0 chimp,horse,human,macaque,orangutan,panda, lincRNA lincRNA A549@0.034351,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0.0350585,HEPG2@0.010849,HMEC@0.006242,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0.037435,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000229401.1 ENST00000366312.2 chr6:10434562-10457014 4 652 21794 intergenic 3.64 0 0,1,0 0 0,0,0 0 9.75094062586033 17.16 0 4.54239698999725 5.52 0 6.86923006332018 5.68 0 0 chimp,human,macaque,orangutan, lincRNA lincRNA A549@0.034351,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0.0350585,HEPG2@0.010849,HMEC@0.006242,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0.037435,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000231056.1 ENST00000431401.1 chr6:10474733-10478735 2 254 3746 intergenic 0 0 0,0,1 0 0,0,0 0 0 0 0 6.00480512546716 3.107 0 6.29978643886813 3.159 0 0 chimp,human,macaque,orangutan, lincRNA lincRNA A549@0.0192685,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0.0213105,HMEC@0,HSMM@0.016942,HUVEC@0,K562@0,MCF7@0,NHEK@0.096938,NHLF@0,SKNSHRA@0.070645, 0 0 0 0 ENSG00000237685.1 ENST00000413129.1 chr6:10511269-10514779 2 1473 2035 intronic 0.58 0 0,0,0 0 0,0,0 0 3.89189189189189 6.688 7.32382892057027 0 28.36 34.152749490835 0 71.893 0 0 cat,chimp,dog,horse,human,macaque,marmoset,orangutan,panda,pig, lincRNA processed_transcript A549@0.371252,AG04450@0.016325,BJ@0,GM12878@0.010664,H1HESC@0.0252595,HELAS3@0.393005,HEPG2@0.077627,HMEC@0,HSMM@0,HUVEC@0.056896,K562@0.0164695,MCF7@0.02757,NHEK@0.119219,NHLF@0,SKNSHRA@0.017099, 0 0 0 0 ENSG00000247393.1 ENST00000500710.1 chr6:10743566-10747802 2 1089 3145 intergenic 1.66 0 1,1,1 0 0,0,0 0 0 0 0 0 0 0 0 0 0 0 cat,chimp,elephant,horse,human,macaque,orangutan,panda, lincRNA lincRNA A549@0.184206,AG04450@0.0145895,BJ@0.02874,GM12878@0.856571,H1HESC@0.181804,HELAS3@0.682136,HEPG2@0.0843965,HMEC@0.09758,HSMM@0.0410295,HUVEC@0.009913,K562@0.31786,MCF7@0.423274,NHEK@0.080746,NHLF@0.0355505,SKNSHRA@0.650144, 0 0 0 0 ENSG00000235051.1 ENST00000436249.1 chr6:10882013-10884447 3 529 1901 exonic 2.03 0 0,1,0 0 0,0,0 0 0 12.152 0 0.725933719095213 16.895 0 0.766964755391899 25.675 0 0 chimp,human,macaque,marmoset,orangutan, antisense antisense A549@0,AG04450@0.0118975,BJ@0.014477,GM12878@0.0058545,H1HESC@0.018137,HELAS3@0.010088,HEPG2@0.010557,HMEC@0,HSMM@0,HUVEC@0,K562@0.0122555,MCF7@0.0106025,NHEK@0,NHLF@0,SKNSHRA@0.0142495, 0 0 0 0 ENSG00000230314.1 ENST00000456190.1 chr6:11043993-11078299 5 732 33566 intronic -3.42 0 0,1,0 0 0,0,0 0 1.49854018947745 0 0 2.60179943990943 2.629 0 3.39105046773521 2.673 0 0 chimp,human,macaque, lincRNA processed_transcript A549@0.04461,AG04450@0.007824,BJ@0.0054065,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0.068627,HMEC@0,HSMM@0,HUVEC@0,K562@0.0031505,MCF7@0.109402,NHEK@0,NHLF@0.048902,SKNSHRA@0.026026, 0 0 0 0 ENSG00000230314.1 ENST00000456616.1 chr6:11044926-11078459 3 900 32629 intergenic 6.02 0 0,1,0 0 0,0,0 0 1.54157344693371 0 0 1.368292010175 42.686 13.8133333333333 2.72165864721567 25.019 0 0 chimp,human, lincRNA processed_transcript A549@0.04461,AG04450@0.007824,BJ@0.0054065,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0.068627,HMEC@0,HSMM@0,HUVEC@0,K562@0.0031505,MCF7@0.109402,NHEK@0,NHLF@0.048902,SKNSHRA@0.026026, 0 0 0 0 ENSG00000224531.3 ENST00000376935.3 chr6:11094039-11136044 4 1373 40626 encompassing 5.75 1 1,1,1 1 0,0,1 136.415149308084 8.29904494658593 0 126.996358339403 9.24944616747895 21.367 127.033503277495 11.2496923152661 26.927 0 0 cat,chimp,dog,elephant,horse,human,macaque,marmoset,mouse,orangutan,panda,rabbit, antisense antisense A549@3.2813,AG04450@2.47489,BJ@1.50306,GM12878@1.31758,H1HESC@0.934648,HELAS3@4.12961,HEPG2@1.03436,HMEC@1.49801,HSMM@1.55489,HUVEC@1.30906,K562@3.7772,MCF7@1.0996,NHEK@2.2131,NHLF@1.56585,SKNSHRA@2.24589, 0 0 0 0 ENSG00000224531.3 ENST00000416247.2 chr6:11094266-11138964 2 4684 40012 encompassing 5.75 1 0,1,1 0 0,0,1 60.5224167378309 8.42639708087574 0 60.9389410760034 8.56195641307608 30.622 64.4624252775405 10.5160951714486 37.129 0 0 chimp,horse,human,macaque,marmoset,panda,pig, antisense antisense A549@3.2813,AG04450@2.47489,BJ@1.50306,GM12878@1.31758,H1HESC@0.934648,HELAS3@4.12961,HEPG2@1.03436,HMEC@1.49801,HSMM@1.55489,HUVEC@1.30906,K562@3.7772,MCF7@1.0996,NHEK@2.2131,NHLF@1.56585,SKNSHRA@2.24589, 0 0 0 0 ENSG00000247925.2 ENST00000500636.2 chr6:11173685-11259332 5 699 84940 exonic 2.92 0 0,0,0 0 0,0,0 114.885550786838 32.136496350365 12.65 37.9256080114449 30.9955027077938 17.521 37.7653791130186 33.9192842006122 18.728 0 0 cat,chimp,cow,dog,elephant,guinea_pig,horse,human,macaque,marmoset,mouse,orangutan,panda,pig,rabbit, antisense antisense A549@0,AG04450@0.0412225,BJ@0.107925,GM12878@0.0525185,H1HESC@0.0319715,HELAS3@0,HEPG2@0.021249,HMEC@0,HSMM@0,HUVEC@0.039716,K562@0.0110945,MCF7@0,NHEK@0.016633,NHLF@0.005543,SKNSHRA@0.011591, 0 0 0 0 ENSG00000233656.1 ENST00000419796.1 chr6:11417583-11481472 3 696 63189 intergenic 6.12 0 0,0,0 0 0,0,0 0 6.21267942205131 0 14.0287356321839 9.27319628416338 0 15.2586206896552 9.74115747994113 0 0 0 cat,chimp,guinea_pig,horse,human,macaque,marmoset,orangutan,pig,rabbit, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0.0538095,H1HESC@0,HELAS3@0,HEPG2@0.006096,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0.005883,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000242753.1 ENST00000423149.1 chr6:11487459-11515943 5 681 27795 intergenic 0.73 0 0,0,0 0 0,0,0 0 0.364094261557834 0 0 1.7620075553157 0 23.5447870778267 4.25558553696708 0 0 0 chimp,human,macaque,marmoset,orangutan, processed_transcript processed_transcript A549@0,AG04450@0,BJ@0,GM12878@0.0167385,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0.001861,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000234427.1 ENST00000412132.1 chr6:11810835-11811481 2 552 92 intergenic 2.91 0 0,0,0 0 0,0,0 303.570652173913 265.163043478261 0 151.25 0 0 164.25 0 0 0 0 cat,chimp,cow,dog,elephant,guinea_pig,horse,human,macaque,marmoset,mouse,orangutan,panda,rabbit,rat, lincRNA lincRNA A549@0.371527,AG04450@0.073891,BJ@0.064555,GM12878@0,H1HESC@0,HELAS3@0.658764,HEPG2@0.275728,HMEC@0.044346,HSMM@0.019772,HUVEC@0,K562@0,MCF7@0,NHEK@0.013983,NHLF@0.003483,SKNSHRA@0.01823, 0 0 0 0 ENSG00000225102.1 ENST00000456036.1 chr6:11990576-11992245 2 274 1393 intergenic -1.47 1 0,1,0 0 0,0,0 0 0 96.638 0 2.40201005025126 99.281 0 4.38190954773869 111.392 0 0 chimp,human,macaque,marmoset,orangutan, antisense antisense A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000234015.1 ENST00000457945.1 chr6:12583147-12585636 2 892 1595 intergenic -3.22 0 0,1,0 0 0,0,0 192.040358744395 46.8344827586207 39.489 162.10201793722 17.6363636363636 67.534 169.031390134529 18.5780564263323 62.713 0 0 chimp,human,macaque,marmoset,orangutan, lincRNA lincRNA A549@0.007545,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0.004603,HUVEC@0.006658,K562@0.0060975,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000237786.1 ENST00000446001.1 chr6:13486526-13487084 2 330 226 exonic 0 0 0,1,1 0 0,0,0 254.427272727273 130.353982300885 0 352.363636363636 165.486725663717 15.325 393.818181818182 184.955752212389 14.875 0 0 cat,cow,elephant,horse,human,macaque,mouse,orangutan,panda,pig,rabbit, antisense antisense A549@0.0569075,AG04450@0.0332695,BJ@0,GM12878@0.40825,H1HESC@0.017532,HELAS3@0.0855565,HEPG2@0.0634255,HMEC@0.024666,HSMM@0,HUVEC@0,K562@0.0941545,MCF7@0.0060555,NHEK@0.0197513,NHLF@0.0233775,SKNSHRA@0.016203, 0 0 0 0 ENSG00000233981.1 ENST00000427011.1 chr6:14005151-14007132 2 384 1595 intergenic 0 1 0,0,0 0 0,0,0 0 9.47962382445141 0 0 0 3.945 0 0 8.347 0 0 chimp,elephant,horse,human,macaque,marmoset,orangutan,pig, lincRNA lincRNA A549@0.0482505,AG04450@0.011613,BJ@0,GM12878@0,H1HESC@0,HELAS3@0.237368,HEPG2@0.0282665,HMEC@0,HSMM@0,HUVEC@0,K562@0.0737995,MCF7@0,NHEK@0.023892,NHLF@0.030049,SKNSHRA@0.0198245, 0 0 0 0 ENSG00000230631.1 ENST00000455973.1 chr6:14230006-14231801 2 468 1325 intergenic -2.37 0 0,0,0 0 0,0,0 0 0 0 0 14.8701886792453 2.629 2.76709401709402 27.1909433962264 0 0 0 chimp,human,macaque,marmoset,orangutan, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000226673.1 ENST00000427276.1 chr6:14280358-14285376 2 3150 1866 intergenic 3.90 0 0,1,0 0 0,0,0 132.165079365079 126.837084673098 167.142 87.2984126984127 112.89281886388 101.721 81.2806349206349 125.924437299035 113.504 0 0 cat,chimp,horse,human,macaque,orangutan,panda, lincRNA lincRNA A549@0.00313,AG04450@0,BJ@0,GM12878@0,H1HESC@1.52073,HELAS3@0,HEPG2@0,HMEC@0.010392,HSMM@0,HUVEC@0.001543,K562@0,MCF7@0.021342,NHEK@0.00372133,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000237346.1 ENST00000456440.1 chr6:14391462-14393519 4 485 1566 intergenic 1.12 0 0,0,0 0 0,0,0 0 0 8.05 25.0721649484536 0 8.925 64.140206185567 2.15006385696041 9.275 0 0 cat,chimp,horse,human,macaque,marmoset,orangutan, lincRNA lincRNA A549@0.015736,AG04450@0,BJ@0,GM12878@0,H1HESC@0.371542,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0.0094965,MCF7@0.008409,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000234540.1 ENST00000434947.1 chr6:14394557-14404520 3 402 9557 intergenic 0.06 0 0,0,0 0 0,0,0 0 28.0375640891493 8.05 0 17.6637019985351 8.925 0 20.2719472637857 9.275 0 0 chimp,human,macaque,marmoset,orangutan, lincRNA lincRNA A549@0,AG04450@0.0146195,BJ@0,GM12878@0.0451275,H1HESC@0.02171,HELAS3@0,HEPG2@0.047146,HMEC@0,HSMM@0,HUVEC@0,K562@0.0132215,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0.0135075, 0 0 0 0 ENSG00000229646.1 ENST00000414740.1 chr6:14597745-14599921 2 145 2029 intergenic 0 0 0,0,0 0 0,0,0 0 0 0 0 12.3558403154263 0 0 14.8994578610153 0 0 0 chimp,human,macaque,orangutan, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0.0157955,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000231077.1 ENST00000447179.1 chr6:14841455-14871959 2 175 30327 intergenic 0 0 0,0,0 0 0,0,0 0 8.5693276618195 0 0 8.08088501994922 3.553 0 9.69858541893363 5.925 0 0 NA lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000234261.1 ENST00000437648.1 chr6:14977019-15090234 4 1013 112196 intergenic -0.28 0 0,1,0 0 0,0,0 1.85093780848963 10.6051017861599 106.374 0.768015794669299 12.2550269171806 85.901 1.67028627838105 14.6895254732789 91.895 0 0 cat,chimp,dog,horse,human,marmoset,orangutan,panda,rabbit, lincRNA lincRNA A549@0,AG04450@0.006947,BJ@0,GM12878@0,H1HESC@1.67588,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0.040464,HUVEC@0.0034365,K562@1.8519,MCF7@1.30321,NHEK@0.0334993,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000235488.1 ENST00000441978.1 chr6:15248046-15248865 2 453 364 intronic 9.13 0 1,1,1 0 0,0,0 276.87417218543 31.8214285714286 8.775 240.194260485651 7.87912087912088 43.2 221.379690949227 10.3434065934066 45.076 0 0 chimp,elephant,guinea_pig,horse,human,macaque,marmoset,mouse,rabbit,rat, antisense antisense A549@0.0803985,AG04450@0.0260255,BJ@0.072135,GM12878@0.0443045,H1HESC@0.0665955,HELAS3@0.223795,HEPG2@0.163541,HMEC@0.026998,HSMM@0.037153,HUVEC@0.0380475,K562@0.057019,MCF7@0.094294,NHEK@0.0986167,NHLF@0.0171055,SKNSHRA@0.107018, 0 0 0 0 ENSG00000232947.1 ENST00000451285.1 chr6:15995175-16000028 2 843 4008 intergenic 0.55 0 0,0,0 0 0,0,0 0 0 0 0 7.74500998003992 0 0 9.41766467065868 0 0 0 chimp,dog,horse,human,macaque,marmoset,orangutan,panda, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0.138788,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000229931.1 ENST00000423260.1 chr6:16761369-16762883 3 488 1022 intronic 0 0 0,0,0 0 0,0,0 83.9467213114754 350.681996086106 272.585 66.7950819672131 370.309197651663 205.564 61.1106557377049 373.873776908023 190.166 0 0 cat,chimp,dog,elephant,guinea_pig,horse,human,macaque,marmoset,orangutan,pig,rat, antisense antisense A549@0.237102,AG04450@0.214994,BJ@2.43072,GM12878@2.47746,H1HESC@0.135185,HELAS3@0.80345,HEPG2@1.82381,HMEC@0.064482,HSMM@0.086462,HUVEC@0.218717,K562@1.11615,MCF7@0.564581,NHEK@0.176008,NHLF@0.242091,SKNSHRA@0.776676, 0 0 0 0 ENSG00000229931.1 ENST00000450930.1 chr6:16762143-16762849 2 633 71 intergenic -3.37 0 0,1,0 1 0,0,0 72.3380726698262 0 486.186 49.3649289099526 27.943661971831 425.502 44.3554502369668 0 423.412 0 0 chimp,cow,elephant,guinea_pig,horse,human,macaque,marmoset,orangutan,panda,pig, antisense antisense A549@0.237102,AG04450@0.214994,BJ@2.43072,GM12878@2.47746,H1HESC@0.135185,HELAS3@0.80345,HEPG2@1.82381,HMEC@0.064482,HSMM@0.086462,HUVEC@0.218717,K562@1.11615,MCF7@0.564581,NHEK@0.176008,NHLF@0.242091,SKNSHRA@0.776676, 0 0 0 0 ENSG00000230873.4 ENST00000536551.1 chr6:17102489-17131603 5 1317 27789 intergenic 15.44 0 0,1,1 0 0,0,1 49.085801063022 6.18327395732124 0 282.604403948367 4.77070063694267 7.553 103.828397873956 5.5171110871208 7.843 0 0 chimp,cow,elephant,guinea_pig,human,macaque,marmoset,mouse,orangutan,panda,pig,rabbit,rat, lincRNA lincRNA A549@0,AG04450@0,BJ@0.023638,GM12878@0,H1HESC@0.0031385,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0.0015565,HUVEC@0,K562@0,MCF7@0.025664,NHEK@0,NHLF@0.007153,SKNSHRA@0.0097595, 0 0 0 0 ENSG00000230873.4 ENST00000354384.5 chr6:17110726-17130906 5 925 19247 intergenic 0 0 0,0,1 0 0,0,1 69.8875675675676 8.92746921598171 0 149.462702702703 5.73081519197797 0 122.246486486486 6.62201901595054 0 0 0 cat,chimp,elephant,guinea_pig,horse,human,macaque,marmoset,mouse,opossum,orangutan,rabbit,rat, lincRNA lincRNA A549@0,AG04450@0,BJ@0.023638,GM12878@0,H1HESC@0.0031385,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0.0015565,HUVEC@0,K562@0,MCF7@0.025664,NHEK@0,NHLF@0.007153,SKNSHRA@0.0097595, 0 0 0 0 ENSG00000230873.4 ENST00000366215.2 chr6:17128169-17131603 2 2083 1349 intergenic 15.44 0 0,0,1 0 0,0,1 0 0 0 134.131060969755 2.23721275018532 0 20.8286125780125 2.28465530022239 0 0 0 chimp,human,macaque,marmoset,orangutan, lincRNA lincRNA A549@0,AG04450@0,BJ@0.023638,GM12878@0,H1HESC@0.0031385,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0.0015565,HUVEC@0,K562@0,MCF7@0.025664,NHEK@0,NHLF@0.007153,SKNSHRA@0.0097595, 0 0 0 0 ENSG00000251392.1 ENST00000509160.1 chr6:17501598-17511496 4 1034 8858 intronic 4.51 0 0,0,0 0 0,0,0 87.57833655706 33.8413863174531 0 86.5154738878143 26.2321065703319 0 99.0212765957447 29.1537593136148 0 0 0 chimp,human,macaque,marmoset,orangutan,pig, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0.0056075,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0.002626,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000229973.1 ENST00000447237.1 chr6:19043980-19061067 2 195 16890 intergenic -6.51 0 0,0,0 0 0,0,0 0 7.35666074600355 0 14.1538461538462 8.58425103611605 0 15.3846153846154 9.08342214328005 10.099 0 0 chimp,cow,dog,elephant,human,macaque,marmoset,orangutan,panda,rabbit, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000231662.1 ENST00000443504.1 chr6:19290550-19321252 2 379 30321 intergenic -17.81 0 0,0,1 0 0,0,0 0 43.1495003462946 0 0 37.83938524455 0 0 40.4661455756736 0 0 0 cat,chimp,cow,dog,elephant,guinea_pig,horse,human,macaque,marmoset,opossum,orangutan,panda,pig,rabbit, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0.0076385,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000226786.1 ENST00000432171.1 chr6:19535175-19640814 4 549 105084 intergenic 2.71 0 0,0,0 0 0,0,0 31.6794171220401 29.8917722964486 0 77.3770491803279 27.420720566404 0 56.9562841530055 39.4022876936546 0 0 0 cat,chimp,cow,dog,elephant,horse,human,macaque,marmoset,orangutan,panda,pig,rabbit, processed_transcript processed_transcript A549@0.0627465,AG04450@0.004053,BJ@0.024596,GM12878@0,H1HESC@0.0105255,HELAS3@0.087643,HEPG2@0.0049325,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0.140668,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000237404.1 ENST00000450310.1 chr6:19690056-19753344 3 188 63096 intergenic -6.88 0 0,0,0 0 0,0,0 0 46.0343603397997 80.838 0 46.6287561810575 55.562 0 48.5135507797642 59.542 0 0 chimp,human,macaque,orangutan, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000227116.1 ENST00000445568.1 chr6:19730658-19734798 2 468 3670 intergenic -2.04 0 0,0,0 0 0,0,0 42.7564102564103 24.5476839237057 82.215 75.0192307692308 30.432970027248 91.178 74.5897435897436 30.4089918256131 92.698 0 0 chimp,guinea_pig,human,macaque,marmoset,orangutan,panda,rabbit, lincRNA lincRNA A549@0.0391985,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0.0870305,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0.0042775,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000237404.1 ENST00000424083.1 chr6:19740408-19749924 3 209 9303 intergenic 0 0 0,1,0 0 0,0,0 0 5.3853595614318 0 0 4.62388476835429 1.53 0 3.86079759217457 1.77 0 0 chimp,dog,horse,human,macaque,marmoset,orangutan,pig,rabbit, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000228412.1 ENST00000447250.1 chr6:19803602-19804877 2 1014 259 intergenic -0.41 0 0,1,0 0 0,0,0 113.352071005917 17.6177606177606 72.568 27.2149901380671 0 75.479 36.0512820512821 0 80.201 0 0 chimp,cow,dog,elephant,horse,human,macaque,marmoset,orangutan,panda,pig,rabbit, lincRNA processed_transcript A549@0.159799,AG04450@0.02377,BJ@0.072453,GM12878@0,H1HESC@0.0901195,HELAS3@0.267686,HEPG2@0.216821,HMEC@0,HSMM@0.052159,HUVEC@0,K562@0.055286,MCF7@0.543911,NHEK@0,NHLF@0.0160115,SKNSHRA@0.0933895, 0 0 0 0 ENSG00000228412.1 ENST00000457670.1 chr6:19803838-19804973 2 370 763 intergenic -11.88 0 0,1,0 0 0,0,0 197.316216216216 65.9960681520315 68.322 12.6054054054054 36.1677588466579 70.391 26.2108108108108 33.4705111402359 74.825 0 0 cat,chimp,cow,dog,elephant,horse,human,macaque,marmoset,orangutan,panda,pig,rabbit, lincRNA processed_transcript A549@0.159799,AG04450@0.02377,BJ@0.072453,GM12878@0,H1HESC@0.0901195,HELAS3@0.267686,HEPG2@0.216821,HMEC@0,HSMM@0.052159,HUVEC@0,K562@0.055286,MCF7@0.543911,NHEK@0,NHLF@0.0160115,SKNSHRA@0.0933895, 0 0 0 0 ENSG00000227803.1 ENST00000449143.1 chr6:20212318-20294706 2 189 82197 exonic 0 0 0,1,0 0 0,0,0 100.714285714286 5.4493108020974 0 127.777777777778 4.01073031862477 7.493 132.402116402116 5.05822596931761 9.363 0 0 chimp,cow,guinea_pig,human,macaque,marmoset,mouse,orangutan,panda,pig, processed_transcript processed_transcript A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000224707.1 ENST00000433182.1 chr6:20438052-20440409 2 398 1957 intronic 4.97 1 0,1,0 0 0,0,0 56.6331658291457 204.025038323965 0 47.7386934673367 98.691364333163 0 41.5628140703518 80.3551354113439 0 0 0 chimp,cow,elephant,horse,human,macaque,marmoset,orangutan,pig, sense_intronic sense_intronic A549@0.08592,AG04450@0.0618135,BJ@0.0104885,GM12878@0.0374115,H1HESC@0.0126315,HELAS3@0.122512,HEPG2@0.230618,HMEC@0,HSMM@0,HUVEC@0.0289555,K562@0.063071,MCF7@0,NHEK@0.019032,NHLF@0,SKNSHRA@0.0973135, 0 0 0 0 ENSG00000233848.1 ENST00000421167.1 chr6:20756334-20800925 5 609 43974 intronic 5.49 0 0,0,1 0 0,0,0 0 13.5462318642834 0 0 13.9439668895256 0 0 16.8519124937463 0 0 0 chimp,cow,dog,horse,human,macaque,marmoset,orangutan,pig, antisense antisense A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000227089.1 ENST00000426374.1 chr6:21354642-21355527 2 385 498 intergenic 0.74 0 0,0,0 0 0,0,0 0 0 0 0 17.0160642570281 0 3.78701298701299 26.35140562249 0 0 0 chimp,elephant,horse,human,macaque,marmoset,orangutan,panda,pig, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000231754.1 ENST00000447728.1 chr6:21522707-21524003 2 541 753 intergenic -1.81 1 0,1,0 0 0,0,0 402.029574861368 439.096945551129 90.705 383.815157116451 185.260292164675 113.456 490.54898336414 271.977423638778 147.757 0 0 cat,chimp,cow,elephant,guinea_pig,horse,human,macaque,marmoset,mouse,opossum,orangutan,panda,rabbit,rat, lincRNA lincRNA A549@0.005087,AG04450@0.0118765,BJ@0.0044565,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0.012873,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0.18762, 0 0 0 0 ENSG00000235767.1 ENST00000413255.1 chr6:21980814-21981701 3 363 520 intergenic 0 0 0,0,0 0 0,0,0 0 0 0 0 0 0 284.911845730028 444.234615384615 35.261 0 0 chimp,human,macaque,marmoset,orangutan, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000238274.2 ENST00000444265.1 chr6:22056775-22111157 2 325 54055 intergenic 1.88 0 0,0,0 0 0,0,0 0 25.6451207103876 0 20.3876923076923 22.843270742762 13.103 40.2123076923077 23.7889371935991 15.385 0 0 chimp,cow,dog,elephant,guinea_pig,horse,human,macaque,marmoset,opossum,orangutan,panda,pig,rabbit, lincRNA lincRNA A549@0.156151,AG04450@0.31467,BJ@0,GM12878@0.051571,H1HESC@0.508789,HELAS3@0,HEPG2@0,HMEC@0.012522,HSMM@0,HUVEC@0.085774,K562@0.0081875,MCF7@0.049883,NHEK@0.019029,NHLF@0.005967,SKNSHRA@0.679582, 0 0 0 0 ENSG00000228772.1 ENST00000427775.1 chr6:22589366-22594062 3 739 3953 intergenic -1.01 0 0,1,0 0 0,0,0 144.424898511502 108.562863647862 0 15.8213802435724 75.6658234252467 0 23.7699594046008 68.8611181381229 0 0 0 cat,chimp,cow,dog,elephant,horse,human,macaque,marmoset,orangutan,panda,pig,rabbit, lincRNA lincRNA A549@0.005851,AG04450@0,BJ@0.0065225,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0.0104015,SKNSHRA@0, 0 0 0 0 ENSG00000233358.1 ENST00000420572.1 chr6:23016954-23177212 4 349 159903 intergenic 1.93 0 0,0,0 0 0,0,0 80.1461318051576 6.04585279825894 28.275 33.7421203438395 6.13292433537832 44.799 34.1948424068768 9.69472117471217 89.773 0 0 chimp,dog,elephant,horse,human,macaque,marmoset,orangutan,pig, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000235743.1 ENST00000431001.1 chr6:23337939-23346788 4 308 8535 intergenic -5.05 0 0,0,0 0 0,0,0 0 19.3204452255419 0 0 12.2624487404804 0 0 13.6640890451084 0 0 0 chimp,human,macaque,marmoset,orangutan,panda,rabbit, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000224164.1 ENST00000453179.1 chr6:24742530-24752149 3 552 9063 intergenic -0.94 0 0,1,0 0 0,0,0 0 5.61944168597595 0 0 7.14928831512744 0 57.2173913043478 31.3913715105374 0 0 0 chimp,human,macaque,marmoset,orangutan,panda,pig, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0.0041075,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0.004088, 0 0 0 0 ENSG00000224164.1 ENST00000423504.1 chr6:24749295-24751917 2 207 2413 intergenic 0 0 0,0,0 0 0,0,0 0 0 0 0 22.3688354745131 0 158.028985507246 110.192706174886 0 0 0 chimp,dog,human,macaque,marmoset,mouse,orangutan,platypus,rat, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0.0041075,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0.004088, 0 0 0 0 ENSG00000229313.1 ENST00000428903.1 chr6:25042067-25056892 3 574 14247 exonic -2.46 1 0,0,1 0 0,0,0 49.9024390243902 11.5350600126342 0 58.3188153310105 2.62027093423177 0 55.3031358885017 2.89794342668632 0 0 0 chimp,cow,dog,elephant,horse,human,macaque,marmoset,orangutan,pig, antisense antisense A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000223623.1 ENST00000416595.1 chr6:25053855-25057301 4 426 3014 intergenic -2.30 1 0,1,1 0 0,0,0 0 9.47312541473126 0 0 0 0 0 0 0 0 0 chimp,human,macaque,orangutan, lincRNA lincRNA A549@0,AG04450@0.0161665,BJ@0,GM12878@0.0802815,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0.0052765, 173 2 0 0 ENSG00000230372.1 ENST00000424868.1 chr6:25061853-25063735 3 469 1409 intergenic -4.57 0 0,1,0 0 0,0,0 22.5586353944563 0 0 12.3731343283582 0 0 14.7910447761194 1.89709013484741 0 0 0 chimp,cow,dog,elephant,human,macaque,marmoset,orangutan,panda,pig, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000235733.1 ENST00000413898.1 chr6:25245583-25261639 4 742 15308 intergenic -1.97 0 0,0,0 0 0,0,0 0 4.37026391429318 0 32.2547169811321 1.63600731643585 39.1 190.188679245283 2.68879017507186 230.79 0 0 chimp,guinea_pig,human,macaque,marmoset,mouse,orangutan,panda,pig,rabbit,rat, antisense antisense A549@0,AG04450@0,BJ@0.003244,GM12878@0,H1HESC@0.0515855,HELAS3@0.030432,HEPG2@0.014626,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0.0025865,SKNSHRA@0.022365, 0 0 0 0 ENSG00000228223.1 ENST00000411553.1 chr6:26522076-26526807 1 4731 0 intergenic 14.00 0 0,1,0 1 0,0,0 0 0 35.275 45.860494610019 0 46.231 99.8976960473473 0 44.986 0 0 chimp,cow,dog,elephant,human,macaque,marmoset,orangutan,panda,pig, lincRNA lincRNA A549@1.53076,AG04450@1.14034,BJ@1.20565,GM12878@1.33202,H1HESC@1.32559,HELAS3@5.52586,HEPG2@0.395821,HMEC@0.244881,HSMM@0.570926,HUVEC@0.635353,K562@6.54291,MCF7@1.00562,NHEK@0.323991,NHLF@0.991788,SKNSHRA@0.109932, 0 0 0 0 ENSG00000244922.1 ENST00000501288.1 chr6:26569552-26574925 2 2881 2490 intergenic 0.89 0 0,0,0 0 0,0,0 0 0 25.232 0 17.0096385542169 38.078 0 18 37.584 1 1 chimp,human,macaque,marmoset,orangutan, lincRNA lincRNA A549@0.0130425,AG04450@0.0177315,BJ@0,GM12878@0.0107255,H1HESC@0.0160625,HELAS3@0.0494585,HEPG2@0.0548945,HMEC@0,HSMM@0.0015815,HUVEC@0,K562@0.0400885,MCF7@0.0168635,NHEK@0.0102873,NHLF@0.002677,SKNSHRA@0.009547, 0 0 0 0 ENSG00000224843.1 ENST00000424968.1 chr6:26988232-26991703 3 504 2963 intergenic 0 1 0,0,1 0 0,0,0 0 0 37.168 0 0 25.078 0 0 29.437 0 0 chimp,human,orangutan, lincRNA processed_transcript A549@0.065772,AG04450@0.046617,BJ@0.0590975,GM12878@0.220068,H1HESC@0.184155,HELAS3@0.543227,HEPG2@0.0107605,HMEC@0.040381,HSMM@0,HUVEC@0.0095915,K562@0.20255,MCF7@0.040284,NHEK@0.164345,NHLF@0.017173,SKNSHRA@0.107706, 0 0 0 0 ENSG00000224843.1 ENST00000420081.1 chr6:26988415-26991703 3 336 2948 intergenic 0 1 0,0,1 0 0,0,0 0 0 37.168 0 0 25.078 0 0 29.437 0 0 NA lincRNA processed_transcript A549@0.065772,AG04450@0.046617,BJ@0.0590975,GM12878@0.220068,H1HESC@0.184155,HELAS3@0.543227,HEPG2@0.0107605,HMEC@0.040381,HSMM@0,HUVEC@0.0095915,K562@0.20255,MCF7@0.040284,NHEK@0.164345,NHLF@0.017173,SKNSHRA@0.107706, 0 0 0 0 ENSG00000246046.1 ENST00000446316.2 chr6:27661858-27676935 3 2767 12306 intergenic 6.20 0 0,1,0 1 0,0,0 0 0 0 0 2.13911912888022 0 0 8.3381277425646 0 0 1 chimp,human,macaque,orangutan, lincRNA lincRNA A549@0.277973,AG04450@0.0064125,BJ@0,GM12878@0.29022,H1HESC@0.381097,HELAS3@0.431443,HEPG2@0.40146,HMEC@0.096083,HSMM@0,HUVEC@0,K562@0.357827,MCF7@0.357917,NHEK@0.2116,NHLF@0,SKNSHRA@0.255045, 0 0 0 0 ENSG00000248841.1 ENST00000508489.1 chr6:27729282-27731046 2 1512 250 intergenic 4.79 0 1,1,1 0 0,0,0 0 0 0 0 0 0 0 0 0 0 1 chimp,human,orangutan, lincRNA lincRNA A549@0,AG04450@0.051005,BJ@0.082489,GM12878@1.5051,H1HESC@0.633939,HELAS3@0.011028,HEPG2@0,HMEC@0.043272,HSMM@0,HUVEC@0.013681,K562@0.647464,MCF7@0.185613,NHEK@0.216861,NHLF@0.0051265,SKNSHRA@0.002997, 0 0 0 0 ENSG00000226314.2 ENST00000440790.2 chr6:28129559-28137372 5 1623 6182 intergenic 3.74 1 1,1,1 1 0,0,1 272.062846580407 5.03170494985442 0 103.208256315465 1.14008411517308 0 83.1435613062231 6.67114202523455 3.215 0 0 cat,chimp,cow,dog,elephant,guinea_pig,horse,human,macaque,marmoset,mouse,opossum,orangutan,panda,pig,platypus,rabbit,rat, lincRNA processed_transcript A549@0.270679,AG04450@0.568612,BJ@0.400351,GM12878@0.768623,H1HESC@0.487209,HELAS3@0.469364,HEPG2@0.889598,HMEC@0.171029,HSMM@0.163795,HUVEC@0.0281395,K562@1.83728,MCF7@0.141467,NHEK@0.500846,NHLF@0.179805,SKNSHRA@0.954257, 0 0 0 0 ENSG00000246350.1 ENST00000499525.1 chr6:28555155-28559524 2 2872 1495 intergenic 5.35 0 0,1,1 1 0,0,0 9.79282729805014 0 125.727 11.7426880222841 0 66.688 11.5201949860724 0 68.632 0 1 chimp,human,orangutan, lincRNA processed_transcript A549@0.396755,AG04450@0.399341,BJ@0.240178,GM12878@0.48458,H1HESC@1.13888,HELAS3@0.617786,HEPG2@0.705904,HMEC@0.240083,HSMM@0.166764,HUVEC@0.0720635,K562@0.0178695,MCF7@0.226352,NHEK@0.237085,NHLF@0.0670615,SKNSHRA@0.284952, 0 0 0 0 ENSG00000235570.1 ENST00000456103.1 chr6:28616063-28616843 2 535 243 intergenic 1.22 1 0,1,1 0 0,0,0 0 0 0 0 0 0 0 0 0 0 0 chimp,elephant,human,macaque,orangutan, lincRNA lincRNA A549@0.0667765,AG04450@0.0120095,BJ@0,GM12878@0,H1HESC@0.027265,HELAS3@0.004942,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0.524915,MCF7@0,NHEK@0.004906,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000225173.1 ENST00000457253.1 chr6:28805646-28806783 2 707 428 intergenic 4.98 0 0,1,0 1 0,0,0 0 68.1308411214953 0 0 91.1775700934579 0 0 88.9906542056075 0 0 0 chimp,human,macaque,orangutan, lincRNA lincRNA A549@0.0261605,AG04450@0,BJ@0,GM12878@0,H1HESC@0.123138,HELAS3@0.105927,HEPG2@0.057473,HMEC@0,HSMM@0,HUVEC@0.0049295,K562@0.542014,MCF7@0.0028355,NHEK@0.007321,NHLF@0,SKNSHRA@0.0032, 0 0 0 0 ENSG00000225595.1 ENST00000440244.1 chr6:28827402-28831127 2 2456 1267 intergenic 6.63 0 0,0,1 0 0,0,0 0 0 29.784 0 0 40.176 189.107491856678 64.3370165745856 39.168 0 0 chimp,human,macaque,marmoset,orangutan, lincRNA processed_transcript A549@0.0112375,AG04450@0,BJ@0,GM12878@0,H1HESC@0.023952,HELAS3@0.017957,HEPG2@0,HMEC@0,HSMM@0.030443,HUVEC@0,K562@0.243391,MCF7@0.0115255,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000224157.1 ENST00000444986.1 chr6:28864307-28865099 2 411 379 intergenic -2.62 1 1,1,1 0 0,0,0 0 0 40.404 0 0 48.658 0 0 47.596 0 0 chimp,human,macaque,orangutan, antisense antisense A549@0.0506855,AG04450@0.048088,BJ@0.0058595,GM12878@0.109354,H1HESC@0.0070465,HELAS3@0.286573,HEPG2@0.090208,HMEC@0,HSMM@0.0165585,HUVEC@0,K562@0.312682,MCF7@0.0591885,NHEK@0.00618167,NHLF@0,SKNSHRA@0.131376, 0 0 0 0 ENSG00000227214.2 ENST00000438190.1 chr6:28953980-28955261 3 1029 248 intergenic -2.79 0 0,0,0 0 0,0,0 0 0 0 0 0 0 3.17201166180758 0 0 0 0 chimp,human,macaque,orangutan, antisense antisense A549@0.249597,AG04450@0.043714,BJ@0.0998475,GM12878@0,H1HESC@0.228219,HELAS3@0.362919,HEPG2@0.146855,HMEC@0.138868,HSMM@0.057547,HUVEC@0.0329475,K562@0.0141925,MCF7@0.0680495,NHEK@0.139755,NHLF@0.0359545,SKNSHRA@0.122075, 0 0 0 0 ENSG00000244349.1 ENST00000445544.1 chr6:28954577-28956313 2 315 1419 intergenic 0 0 0,0,1 0 0,0,0 0 0 0 0 0 0 0 0 3.264 0 0 chimp,horse,human,macaque,marmoset,orangutan,pig, antisense antisense A549@0.147631,AG04450@0.0149415,BJ@0.0086055,GM12878@0,H1HESC@0.083115,HELAS3@0.267306,HEPG2@0.0523565,HMEC@0,HSMM@0,HUVEC@0,K562@0.00888,MCF7@0,NHEK@0.15755,NHLF@0.018114,SKNSHRA@0.015288, 0 0 0 0 ENSG00000227206.1 ENST00000419702.1 chr6:29091987-29096685 2 387 4309 intergenic 3.35 1 0,0,0 0 0,0,0 0 0 0 0 0 0 0 0 0 0 0 chimp,elephant,horse,human,marmoset,orangutan, lincRNA lincRNA A549@0.0173395,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0.0214605,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0.02102,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000232505.1 ENST00000441381.1 chr6:29191750-29234862 3 461 42647 intergenic 3.95 1 0,0,0 0 0,0,0 0 0.65277745210683 0 0 0.957159940910263 0 49.0043383947939 5.01671864374985 0 0 0 cat,chimp,cow,dog,elephant,guinea_pig,horse,human,macaque,marmoset,mouse,opossum,orangutan,panda,pig,platypus,rabbit,rat, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0.008996,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000229274.1 ENST00000436804.1 chr6:29465286-29478333 4 873 12168 intergenic 4.36 1 0,1,0 0 0,0,0 0 0 0 0 0 0 0 0 0 0 0 chimp,human,orangutan, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0.005633,H1HESC@0,HELAS3@0.012105,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000224582.1 ENST00000434657.1 chr6:29497197-29501345 3 2774 1370 intergenic 8.58 1 0,0,0 0 0,0,0 0 0 0 0 0 0 0 0 15.446 0 0 chimp,human,macaque,marmoset,orangutan, antisense antisense A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0.0020025, 0 0 0 0 ENSG00000224582.1 ENST00000445296.1 chr6:29497253-29499934 4 395 2280 intergenic -5.53 0 0,0,0 0 0,0,0 0 0 0 0 0 0 0 0 15.446 0 0 chimp,human,macaque,marmoset,orangutan, antisense antisense A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0.0020025, 0 0 0 0 ENSG00000214922.3 ENST00000399247.2 chr6:29694378-29716826 6 1899 20539 exonic 6.84 1 1,1,1 1 0,0,0 0 0 0 28.5855713533439 0 0 194.437598736177 3.42947563172501 0 0 0 chimp,human,orangutan, processed_transcript processed_transcript A549@0.209902,AG04450@0.159325,BJ@0.799505,GM12878@0.751262,H1HESC@0.836082,HELAS3@0.993354,HEPG2@1.06916,HMEC@3.83105,HSMM@0.110239,HUVEC@0.42249,K562@1.28478,MCF7@0.514356,NHEK@2.25912,NHLF@1.01209,SKNSHRA@0.009326, 0 0 0 0 ENSG00000214922.3 ENST00000458236.1 chr6:29702805-29716770 6 2829 11126 exonic 2.36 1 1,1,1 1 0,0,0 0 0 0 0 0 0 0.858960763520679 3.58745281323027 0 0 0 chimp,human,macaque,marmoset,orangutan, processed_transcript processed_transcript A549@0.209902,AG04450@0.159325,BJ@0.799505,GM12878@0.751262,H1HESC@0.836082,HELAS3@0.993354,HEPG2@1.06916,HMEC@3.83105,HSMM@0.110239,HUVEC@0.42249,K562@1.28478,MCF7@0.514356,NHEK@2.25912,NHLF@1.01209,SKNSHRA@0.009326, 0 0 0 0 ENSG00000214922.3 ENST00000434086.1 chr6:29705536-29706221 2 551 132 exonic -0.27 0 0,1,1 0 0,0,0 0 0 0 0 0 0 0 0 0 0 0 chimp,elephant,human,macaque,marmoset,orangutan, processed_transcript processed_transcript A549@0.209902,AG04450@0.159325,BJ@0.799505,GM12878@0.751262,H1HESC@0.836082,HELAS3@0.993354,HEPG2@1.06916,HMEC@3.83105,HSMM@0.110239,HUVEC@0.42249,K562@1.28478,MCF7@0.514356,NHEK@2.25912,NHLF@1.01209,SKNSHRA@0.009326, 0 0 0 0 ENSG00000204625.6 ENST00000376800.3 chr6:29942889-29946183 3 656 2634 intergenic 7.72 1 0,1,0 0 0,0,0 0 0 0 0 0 0 0 0 12.417 0 0 chimp,human,macaque,orangutan, lincRNA lincRNA A549@0.0154895,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0.0068575,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0.009032,K562@0.0035235,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000204625.6 ENST00000463275.1 chr6:29945244-29945494 2 99 149 intergenic 0 0 0,1,0 0 0,0,0 0 0 0 0 0 0 0 0 0 0 0 chimp,human,macaque,marmoset,orangutan, lincRNA lincRNA A549@0.0154895,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0.0068575,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0.009032,K562@0.0035235,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000204623.4 ENST00000425604.1 chr6:29968788-30028705 3 1983 57930 intergenic 1.61 1 0,0,1 1 0,0,0 9.72012102874433 1.67434835145866 55.764 11.4553706505295 4.591213533575 61.663 9.76147251638931 32.5789228379078 61.328 0 0 chimp,human,marmoset, lincRNA processed_transcript A549@2.79499,AG04450@1.77981,BJ@2.63349,GM12878@7.16263,H1HESC@5.55904,HELAS3@5.68262,HEPG2@4.73582,HMEC@0.543661,HSMM@0.714703,HUVEC@1.76052,K562@12.5439,MCF7@2.56084,NHEK@2.55441,NHLF@0.569106,SKNSHRA@5.32409, 0 0 0 0 ENSG00000204623.4 ENST00000448093.1 chr6:29968788-30028920 4 2292 57834 intergenic 1.61 1 1,1,1 1 0,0,0 8.40968586387435 1.67712764117993 104.889 9.91099476439791 4.59883459556662 82.128 8.44546247818499 32.6330013486876 83.69 0 0 chimp,human, lincRNA processed_transcript A549@2.79499,AG04450@1.77981,BJ@2.63349,GM12878@7.16263,H1HESC@5.55904,HELAS3@5.68262,HEPG2@4.73582,HMEC@0.543661,HSMM@0.714703,HUVEC@1.76052,K562@12.5439,MCF7@2.56084,NHEK@2.55441,NHLF@0.569106,SKNSHRA@5.32409, 0 0 0 0 ENSG00000204623.4 ENST00000376797.3 chr6:29968788-30028921 12 3258 56853 intergenic 4.88 1 1,1,1 1 0,0,0 5.91620626151013 1.70606652243505 104.889 8.1025168815224 4.61342409371537 82.128 12.0758133824432 32.8395511230718 83.69 0 0 chimp,horse,human,macaque,orangutan, lincRNA processed_transcript A549@2.79499,AG04450@1.77981,BJ@2.63349,GM12878@7.16263,H1HESC@5.55904,HELAS3@5.68262,HEPG2@4.73582,HMEC@0.543661,HSMM@0.714703,HUVEC@1.76052,K562@12.5439,MCF7@2.56084,NHEK@2.55441,NHLF@0.569106,SKNSHRA@5.32409, 0 0 0 0 ENSG00000204623.4 ENST00000420251.1 chr6:29968788-30028961 6 2424 57739 intergenic 1.61 1 1,1,1 1 0,0,0 7.95173267326733 1.67988707805816 104.889 9.37128712871287 4.60640121927986 82.128 7.98556105610561 32.6866935693379 83.69 0 0 chimp,human,macaque,marmoset,orangutan, lincRNA processed_transcript A549@2.79499,AG04450@1.77981,BJ@2.63349,GM12878@7.16263,H1HESC@5.55904,HELAS3@5.68262,HEPG2@4.73582,HMEC@0.543661,HSMM@0.714703,HUVEC@1.76052,K562@12.5439,MCF7@2.56084,NHEK@2.55441,NHLF@0.569106,SKNSHRA@5.32409, 0 0 0 0 ENSG00000204623.4 ENST00000444051.1 chr6:29979876-30002792 2 9769 13145 intergenic 2.07 1 0,0,1 0 0,0,0 0 0 0 0 0.433929250665652 0 0 114.975047546596 0 0 0 chimp,human,orangutan, lincRNA processed_transcript A549@2.79499,AG04450@1.77981,BJ@2.63349,GM12878@7.16263,H1HESC@5.55904,HELAS3@5.68262,HEPG2@4.73582,HMEC@0.543661,HSMM@0.714703,HUVEC@1.76052,K562@12.5439,MCF7@2.56084,NHEK@2.55441,NHLF@0.569106,SKNSHRA@5.32409, 0 0 0 0 ENSG00000204623.4 ENST00000437417.1 chr6:29987547-30029417 6 1491 40369 exonic 0.19 0 0,0,1 0 0,0,0 32.4875922199866 2.40271000024771 118.64 43.9289067739772 3.60491961653744 78.029 39.8692152917505 42.5354851494959 90.889 0 0 chimp,horse,human,macaque,marmoset,orangutan,pig, lincRNA processed_transcript A549@2.79499,AG04450@1.77981,BJ@2.63349,GM12878@7.16263,H1HESC@5.55904,HELAS3@5.68262,HEPG2@4.73582,HMEC@0.543661,HSMM@0.714703,HUVEC@1.76052,K562@12.5439,MCF7@2.56084,NHEK@2.55441,NHLF@0.569106,SKNSHRA@5.32409, 0 0 0 0 ENSG00000204623.4 ENST00000422224.1 chr6:30002712-30026524 4 696 23110 intergenic -3.00 0 0,0,0 0 0,0,0 50.1652298850575 3.52033751622674 0 63.2025862068966 4.39883167459974 16.593 57.8376436781609 7.05625270445694 21.464 0 0 cat,chimp,cow,dog,guinea_pig,horse,human,macaque,marmoset,mouse,orangutan,pig,rabbit, lincRNA processed_transcript A549@2.79499,AG04450@1.77981,BJ@2.63349,GM12878@7.16263,H1HESC@5.55904,HELAS3@5.68262,HEPG2@4.73582,HMEC@0.543661,HSMM@0.714703,HUVEC@1.76052,K562@12.5439,MCF7@2.56084,NHEK@2.55441,NHLF@0.569106,SKNSHRA@5.32409, 0 0 0 0 ENSG00000204623.4 ENST00000421692.1 chr6:30003207-30028966 4 1702 24051 intergenic 0.52 0 0,1,0 1 0,0,0 55.807285546416 0.870816182279323 104.889 56.1756756756757 2.79506049644505 80.788 57.7179788484136 5.28697351461478 82.346 0 0 cat,chimp,dog,horse,human,macaque,marmoset,mouse,opossum,orangutan,pig,rabbit, lincRNA processed_transcript A549@2.79499,AG04450@1.77981,BJ@2.63349,GM12878@7.16263,H1HESC@5.55904,HELAS3@5.68262,HEPG2@4.73582,HMEC@0.543661,HSMM@0.714703,HUVEC@1.76052,K562@12.5439,MCF7@2.56084,NHEK@2.55441,NHLF@0.569106,SKNSHRA@5.32409, 0 0 0 0 ENSG00000204623.4 ENST00000431012.1 chr6:30022378-30028956 3 3291 3283 intergenic 1.57 1 0,1,0 1 0,0,0 28.8617441507141 6.37953091684435 104.889 35.2777271346095 14.03716113311 82.128 36.0203585536311 16.1897654584222 83.69 0 0 chimp,elephant,horse,human,macaque,marmoset,orangutan, lincRNA processed_transcript A549@2.79499,AG04450@1.77981,BJ@2.63349,GM12878@7.16263,H1HESC@5.55904,HELAS3@5.68262,HEPG2@4.73582,HMEC@0.543661,HSMM@0.714703,HUVEC@1.76052,K562@12.5439,MCF7@2.56084,NHEK@2.55441,NHLF@0.569106,SKNSHRA@5.32409, 0 0 0 0 ENSG00000204623.4 ENST00000452229.1 chr6:30024530-30028756 3 3650 572 intergenic -2.26 0 0,0,0 1 0,0,0 30.3079452054794 9.27272727272727 75.807 42.1821917808219 13.8426573426573 70.71 44.0835616438356 18.2744755244755 71.072 0 0 chimp,cow,elephant,human,macaque,marmoset,orangutan, lincRNA processed_transcript A549@2.79499,AG04450@1.77981,BJ@2.63349,GM12878@7.16263,H1HESC@5.55904,HELAS3@5.68262,HEPG2@4.73582,HMEC@0.543661,HSMM@0.714703,HUVEC@1.76052,K562@12.5439,MCF7@2.56084,NHEK@2.55441,NHLF@0.569106,SKNSHRA@5.32409, 0 0 0 0 ENSG00000231226.1 ENST00000440874.1 chr6:30073017-30082501 4 545 8933 exonic -0.25 1 0,0,1 0 0,0,0 0 0.926900257472294 0 1.75412844036697 4.34993843053845 0 1.84220183486239 7.03582223217284 0 0 0 chimp,horse,human,macaque,marmoset,orangutan,pig, antisense antisense A549@0,AG04450@0,BJ@0,GM12878@0.160086,H1HESC@0.045053,HELAS3@0.234368,HEPG2@0.561747,HMEC@0.059667,HSMM@0,HUVEC@0,K562@0,MCF7@0.0223875,NHEK@0.152072,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000242996.1 ENST00000455957.1 chr6:30201816-30202254 2 348 88 intergenic -3.95 1 0,0,1 0 0,0,0 0 0 0 41.0344827586207 0 0 61.3103448275862 0 7.776 0 0 chimp,horse,human,macaque,orangutan, lincRNA processed_transcript A549@0.0965335,AG04450@0.123576,BJ@0.157658,GM12878@0.164631,H1HESC@0.077986,HELAS3@0.0552395,HEPG2@0.196107,HMEC@0,HSMM@0.137352,HUVEC@0.0238885,K562@0.28078,MCF7@0.0856585,NHEK@0.015117,NHLF@0.0614955,SKNSHRA@0.214232, 0 0 0 0 ENSG00000242996.1 ENST00000453558.1 chr6:30201816-30293911 5 727 91360 encompassing -3.95 1 0,0,1 0 0,0,0 0 1.0130472854641 157.051 22.0302613480055 2.2385945709282 152.585 31.2310866574966 3.33053852889667 150.725 0 0 chimp,cow,horse,human,macaque,orangutan,pig,rabbit, lincRNA processed_transcript A549@0.0965335,AG04450@0.123576,BJ@0.157658,GM12878@0.164631,H1HESC@0.077986,HELAS3@0.0552395,HEPG2@0.196107,HMEC@0,HSMM@0.137352,HUVEC@0.0238885,K562@0.28078,MCF7@0.0856585,NHEK@0.015117,NHLF@0.0614955,SKNSHRA@0.214232, 0 0 0 0 ENSG00000231074.2 ENST00000438412.1 chr6:30258571-30294164 4 2436 33151 exonic -0.51 0 1,1,1 1 0,0,0 23.4162561576355 0 291.394 0 1.01091973092818 243.132 0 1.95647190130011 228.658 0 0 chimp,horse,human,macaque,orangutan, lincRNA processed_transcript A549@4.104,AG04450@4.38213,BJ@3.94511,GM12878@5.25245,H1HESC@8.7343,HELAS3@8.34511,HEPG2@6.28923,HMEC@2.30694,HSMM@2.74036,HUVEC@4.1986,K562@7.17382,MCF7@4.86411,NHEK@4.06231,NHLF@3.90711,SKNSHRA@7.18628, 0 0 0 0 ENSG00000231074.2 ENST00000444126.1 chr6:30258783-30294111 4 4601 30721 exonic -0.51 1 1,1,1 1 0,0,0 12.3977396218213 0 263.251 0.571397522277766 1.00530581686794 243.132 0.600086937622256 2.02135347156668 228.341 0 0 chimp,human,macaque,orangutan, lincRNA processed_transcript A549@4.104,AG04450@4.38213,BJ@3.94511,GM12878@5.25245,H1HESC@8.7343,HELAS3@8.34511,HEPG2@6.28923,HMEC@2.30694,HSMM@2.74036,HUVEC@4.1986,K562@7.17382,MCF7@4.86411,NHEK@4.06231,NHLF@3.90711,SKNSHRA@7.18628, 0 0 0 0 ENSG00000231074.2 ENST00000449544.1 chr6:30258783-30294124 3 4259 31078 exonic -0.51 1 1,1,1 1 0,0,0 13.3932848086405 0 270.154 0.617281051890115 0.993757642061909 243.132 0.648274242779995 1.99813372803913 228.341 0 0 chimp,horse,human,macaque,orangutan, lincRNA processed_transcript A549@4.104,AG04450@4.38213,BJ@3.94511,GM12878@5.25245,H1HESC@8.7343,HELAS3@8.34511,HEPG2@6.28923,HMEC@2.30694,HSMM@2.74036,HUVEC@4.1986,K562@7.17382,MCF7@4.86411,NHEK@4.06231,NHLF@3.90711,SKNSHRA@7.18628, 0 0 0 0 ENSG00000231074.2 ENST00000454129.1 chr6:30258783-30294153 3 4430 30936 exonic -0.51 1 1,1,1 1 0,0,0 12.8762979683973 0 285.553 0.593453724604966 0.998319110421515 243.132 0.623250564334086 2.00730540470649 228.341 0 0 chimp,horse,human,macaque,orangutan, lincRNA processed_transcript A549@4.104,AG04450@4.38213,BJ@3.94511,GM12878@5.25245,H1HESC@8.7343,HELAS3@8.34511,HEPG2@6.28923,HMEC@2.30694,HSMM@2.74036,HUVEC@4.1986,K562@7.17382,MCF7@4.86411,NHEK@4.06231,NHLF@3.90711,SKNSHRA@7.18628, 0 0 0 0 ENSG00000231074.2 ENST00000454269.1 chr6:30258783-30294163 4 2426 32948 exonic -0.51 1 1,1,1 1 0,0,0 23.5127782357791 0 290.863 0 1.01714823358019 243.132 0 1.96852616243778 228.341 0 0 chimp,human,macaque,orangutan, lincRNA processed_transcript A549@4.104,AG04450@4.38213,BJ@3.94511,GM12878@5.25245,H1HESC@8.7343,HELAS3@8.34511,HEPG2@6.28923,HMEC@2.30694,HSMM@2.74036,HUVEC@4.1986,K562@7.17382,MCF7@4.86411,NHEK@4.06231,NHLF@3.90711,SKNSHRA@7.18628, 0 0 0 0 ENSG00000231074.2 ENST00000412685.1 chr6:30258783-30294628 5 2901 32936 exonic -0.51 1 1,1,1 1 0,0,0 26.7583591864874 0 311.166 5.41261633919338 1.01751882438669 239.714 5.51913133402275 1.96924338110274 226.02 0 0 chimp,human,macaque, lincRNA processed_transcript A549@4.104,AG04450@4.38213,BJ@3.94511,GM12878@5.25245,H1HESC@8.7343,HELAS3@8.34511,HEPG2@6.28923,HMEC@2.30694,HSMM@2.74036,HUVEC@4.1986,K562@7.17382,MCF7@4.86411,NHEK@4.06231,NHLF@3.90711,SKNSHRA@7.18628, 0 0 0 0 ENSG00000231074.2 ENST00000413358.1 chr6:30258783-30294674 4 4313 31572 exonic -0.51 1 1,1,1 1 0,0,0 15.5648040806863 0.651970100088686 300.546 3.48226292603756 1.47554795388319 226.734 3.85091583584512 2.47399594577474 213.296 0 0 chimp,horse,human,macaque,orangutan, lincRNA processed_transcript A549@4.104,AG04450@4.38213,BJ@3.94511,GM12878@5.25245,H1HESC@8.7343,HELAS3@8.34511,HEPG2@6.28923,HMEC@2.30694,HSMM@2.74036,HUVEC@4.1986,K562@7.17382,MCF7@4.86411,NHEK@4.06231,NHLF@3.90711,SKNSHRA@7.18628, 0 0 0 0 ENSG00000231074.2 ENST00000426882.1 chr6:30258783-30294927 3 4859 31281 exonic -0.51 1 1,1,1 0 0,0,0 45.7003498662276 0 166.203 33.80510393085 0.98730858987884 93.183 33.3784729368183 1.9851667146191 83.727 0 0 chimp,human,macaque,orangutan, lincRNA processed_transcript A549@4.104,AG04450@4.38213,BJ@3.94511,GM12878@5.25245,H1HESC@8.7343,HELAS3@8.34511,HEPG2@6.28923,HMEC@2.30694,HSMM@2.74036,HUVEC@4.1986,K562@7.17382,MCF7@4.86411,NHEK@4.06231,NHLF@3.90711,SKNSHRA@7.18628, 0 0 0 0 ENSG00000235781.1 ENST00000415195.1 chr6:30484043-30486994 2 849 2100 intergenic 0.44 0 0,1,0 1 0,0,0 0 0 0 0 0 0 0 0 0 0 0 chimp,human,orangutan, antisense antisense A549@0.454043,AG04450@0.214167,BJ@0.195902,GM12878@0.381533,H1HESC@0.489374,HELAS3@0.335036,HEPG2@0.562552,HMEC@0.038492,HSMM@0.0884665,HUVEC@0.068415,K562@0.77276,MCF7@0.478966,NHEK@0.0626837,NHLF@0.070746,SKNSHRA@0.327727, 0 0 0 0 ENSG00000224328.1 ENST00000442150.1 chr6:30670844-30680961 3 735 9378 exonic 0.76 1 0,0,0 0 0,0,0 103.27619047619 16.8647899338878 29.484 109.517006802721 16.6134570270847 93.967 117.662585034014 18.1032203028364 106.052 0 0 cat,chimp,cow,dog,guinea_pig,horse,human,macaque,marmoset,mouse,orangutan,panda,pig,rabbit,rat, antisense antisense A549@0.028339,AG04450@0.006074,BJ@0.006558,GM12878@0.0583465,H1HESC@0.004027,HELAS3@0.0244935,HEPG2@0.002887,HMEC@0.005548,HSMM@0,HUVEC@0,K562@0.0198405,MCF7@0.0054485,NHEK@0.006248,NHLF@0.005288,SKNSHRA@0.0153875, 0 0 0 0 ENSG00000228022.1 ENST00000439406.1 chr6:30734602-30760027 4 1198 24221 intergenic 1.47 1 0,0,1 0 0,0,0 0 1.14140621774493 0 1.35225375626043 5.16700383964328 0 3.79632721202003 6.47256512943314 0 0 0 chimp,human,macaque,marmoset,orangutan, lincRNA lincRNA A549@0.0327075,AG04450@0.025762,BJ@0.002058,GM12878@0.0125575,H1HESC@0.002421,HELAS3@0.049232,HEPG2@0.118103,HMEC@0.006964,HSMM@0.0263565,HUVEC@0.040953,K562@0.0838165,MCF7@0.008703,NHEK@0.0384657,NHLF@0.0247955,SKNSHRA@0.0446495, 0 0 0 0 ENSG00000228022.1 ENST00000422944.1 chr6:30749735-30760027 3 1173 9115 intergenic 1.47 1 1,1,1 0 0,0,0 8.03921568627451 0.550301700493692 0 21.2225063938619 4.36094349972573 8.134 24.3606138107417 5.09380142622052 12.473 0 0 chimp,human,macaque,marmoset,orangutan, lincRNA lincRNA A549@0.0327075,AG04450@0.025762,BJ@0.002058,GM12878@0.0125575,H1HESC@0.002421,HELAS3@0.049232,HEPG2@0.118103,HMEC@0.006964,HSMM@0.0263565,HUVEC@0.040953,K562@0.0838165,MCF7@0.008703,NHEK@0.0384657,NHLF@0.0247955,SKNSHRA@0.0446495, 0 0 0 0 ENSG00000214894.2 ENST00000419357.1 chr6:30766431-30798436 2 262 31741 intergenic 0 0 0,1,0 0 0,0,0 0 3.06203333228317 0 0 1.92416748054567 0 0 2.32642323808324 0 0 0 chimp,human, lincRNA processed_transcript A549@0.0445065,AG04450@0.0711615,BJ@0.094581,GM12878@0.0850125,H1HESC@0.087509,HELAS3@0.202326,HEPG2@0.0736345,HMEC@0.001995,HSMM@0.010568,HUVEC@0.0729495,K562@0.132659,MCF7@0.18802,NHEK@0.066465,NHLF@0.002842,SKNSHRA@0.116597, 0 0 0 0 ENSG00000214894.2 ENST00000399196.1 chr6:30780643-30798436 2 2050 15741 intergenic 7.68 0 0,1,1 0 0,0,0 0 1.10285242360714 0 0 2.96448764373293 0 0 3.11155580966902 0 0 0 chimp,human,macaque,orangutan, lincRNA processed_transcript A549@0.0445065,AG04450@0.0711615,BJ@0.094581,GM12878@0.0850125,H1HESC@0.087509,HELAS3@0.202326,HEPG2@0.0736345,HMEC@0.001995,HSMM@0.010568,HUVEC@0.0729495,K562@0.132659,MCF7@0.18802,NHEK@0.066465,NHLF@0.002842,SKNSHRA@0.116597, 0 0 0 0 ENSG00000237923.1 ENST00000442852.1 chr6:30807303-30815936 3 796 7833 intergenic -4.40 0 0,1,0 0 0,0,0 0 0 0 0 0.954168262479254 0 0 1.01225584067407 0 0 0 chimp,horse,human,macaque,marmoset,orangutan, lincRNA lincRNA A549@0.0054335,AG04450@0,BJ@0,GM12878@0,H1HESC@16.1476,HELAS3@0.008484,HEPG2@0,HMEC@0.010249,HSMM@0.0051505,HUVEC@0,K562@0,MCF7@0,NHEK@0.17047,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000237775.1 ENST00000458361.1 chr6:30834759-30843695 2 3992 4942 intergenic 4.49 0 0,0,1 0 0,0,0 7.31713426853707 0 0 0 0 13.209 0 0 17.657 0 0 chimp,human,macaque,orangutan, antisense antisense A549@0,AG04450@0,BJ@0,GM12878@0.002019,H1HESC@0.001488,HELAS3@0,HEPG2@0.003799,HMEC@0,HSMM@0,HUVEC@0,K562@0.0035555,MCF7@0.0020365,NHEK@0.00115467,NHLF@0,SKNSHRA@0.002272, 0 0 0 0 ENSG00000233529.1 ENST00000419481.1 chr6:30913756-30922639 3 602 8277 exonic 0.43 0 0,0,1 0 0,0,0 26.4318936877076 11.2678506705328 0 10.141196013289 6.95251902863356 0 9.81395348837209 8.473480729733 0 0 0 cow,dog,elephant,horse,human,macaque,panda,pig, antisense antisense A549@0,AG04450@0,BJ@0.008139,GM12878@0.023191,H1HESC@0,HELAS3@0.0087735,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0.0096395,SKNSHRA@0.0075135, 0 0 0 0 ENSG00000226568.1 ENST00000416716.1 chr6:30997689-31002485 3 609 4183 intergenic 0 0 0,0,0 0 0,0,1 0 0 0 0.83743842364532 1.65814009084389 0 7.88669950738916 4.00860626344729 1.325 0 0 cat,chimp,cow,dog,elephant,horse,human,macaque,marmoset,orangutan,panda,pig,rabbit, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0.0133715,HMEC@0,HSMM@0,HUVEC@0,K562@0.003794,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0.0222565, 0 0 0 0 ENSG00000228789.1 ENST00000426185.1 chr6:31021984-31027653 3 1977 3688 intergenic 18.38 1 0,0,0 0 0,0,0 0 0 0 0 0.95173535791757 0 4.86798179059181 1.3882863340564 0 0 0 cat,chimp,cow,horse,human,marmoset,orangutan,panda,pig, lincRNA processed_transcript A549@0,AG04450@0.0574655,BJ@0,GM12878@0.343719,H1HESC@0.0125335,HELAS3@0,HEPG2@0.006888,HMEC@0.02068,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0.125995,NHLF@0.08734,SKNSHRA@0.142382, 0 0 0 0 ENSG00000204528.3 ENST00000412143.1 chr6:31141512-31145676 3 590 3570 intronic 1.48 1 0,0,1 0 0,0,0 48.8677966101695 0 0 0 1.91484593837535 0 103.559322033898 2.97535014005602 0 0 0 cat,dog,horse,human,orangutan,panda, sense_intronic sense_intronic A549@0.16424,AG04450@0,BJ@0,GM12878@0.146538,H1HESC@0.018414,HELAS3@0.163206,HEPG2@0.340412,HMEC@1.17249,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0.0293677,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000206344.5 ENST00000383331.4 chr6:31165537-31171745 2 1718 4488 intergenic 3.91 1 1,1,1 0 0,0,0 0 0 0 2.78230500582072 0 0 2.92200232828871 0 0 0 0 chimp,horse,human,macaque,marmoset,orangutan, lincRNA processed_transcript A549@0.108157,AG04450@0.037607,BJ@0.101747,GM12878@0.958119,H1HESC@0.058458,HELAS3@0.777704,HEPG2@0.812082,HMEC@0.011903,HSMM@0.0379845,HUVEC@0.058057,K562@1.38855,MCF7@0.0621235,NHEK@0.020043,NHLF@0.227042,SKNSHRA@0.170662, 0 0 0 0 ENSG00000206344.5 ENST00000424675.1 chr6:31165915-31170999 2 893 4189 intergenic 3.91 0 0,1,0 1 0,0,0 0 0 0 5.35274356103023 0 0 5.62150055991041 0 0 0 0 chimp,elephant,horse,human,macaque,marmoset,orangutan,panda,rabbit, lincRNA processed_transcript A549@0.108157,AG04450@0.037607,BJ@0.101747,GM12878@0.958119,H1HESC@0.058458,HELAS3@0.777704,HEPG2@0.812082,HMEC@0.011903,HSMM@0.0379845,HUVEC@0.058057,K562@1.38855,MCF7@0.0621235,NHEK@0.020043,NHLF@0.227042,SKNSHRA@0.170662, 0 0 0 0 ENSG00000232703.1 ENST00000414008.1 chr6:31167942-31169695 2 515 1236 intergenic 0 0 0,0,0 0 0,0,0 0 0 0 0 0 0 0 0 0 0 0 chimp,human,macaque,marmoset,orangutan, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0.0090675,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000206344.5 ENST00000415276.1 chr6:31169790-31170778 2 669 317 intergenic 3.91 0 0,0,0 0 0,0,0 0 0 0 4.64424514200299 0 0 4.87742899850523 0 0 0 0 chimp,cow,elephant,horse,human,macaque,marmoset,orangutan,panda,rabbit,rat, lincRNA processed_transcript A549@0.108157,AG04450@0.037607,BJ@0.101747,GM12878@0.958119,H1HESC@0.058458,HELAS3@0.777704,HEPG2@0.812082,HMEC@0.011903,HSMM@0.0379845,HUVEC@0.058057,K562@1.38855,MCF7@0.0621235,NHEK@0.020043,NHLF@0.227042,SKNSHRA@0.170662, 0 0 0 0 ENSG00000256166.1 ENST00000539514.1 chr6:31261685-31269419 4 532 7196 intergenic 5.08 0 0,1,1 0 0,0,0 0 0 0 0 0 0 0 0.709143968871595 0 0 1 chimp,human,marmoset,orangutan, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0.0188045,H1HESC@0.0300775,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0.643153,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000230174.1 ENST00000430364.1 chr6:31409444-31414750 2 2139 3165 intergenic 7.78 1 0,0,1 0 0,0,0 0 0 0 0 0 0 0 0 0 0 0 human,macaque,marmoset,orangutan, lincRNA lincRNA A549@0.006154,AG04450@0.008472,BJ@0.0024475,GM12878@0,H1HESC@0.0029865,HELAS3@0.0065285,HEPG2@0.0019085,HMEC@0,HSMM@0,HUVEC@0.0081355,K562@0.0044885,MCF7@0.001127,NHEK@0.00918233,NHLF@0.0058945,SKNSHRA@0, 0 0 0 0 ENSG00000206337.6 ENST00000460889.1 chr6:31430962-31431598 3 462 170 intergenic -0.14 0 1,1,1 1 0,0,1 0 0 0 11.2186147186147 22.3882352941176 2.94 11.5562770562771 22.3882352941176 3 0 0 cat,human,pig, processed_transcript processed_transcript A549@0.166667,AG04450@0.160211,BJ@0.505174,GM12878@35.3303,H1HESC@2.43131,HELAS3@20.3975,HEPG2@4.24015,HMEC@0.75673,HSMM@0.100625,HUVEC@0.148546,K562@0,MCF7@0.113339,NHEK@3.21684,NHLF@0.520539,SKNSHRA@0.52931, 0 0 0 0 ENSG00000206337.6 ENST00000541196.1 chr6:31430962-31432156 2 1102 90 intergenic 0.65 0 1,1,1 1 0,0,1 0 0 0 4.7032667876588 42.2888888888889 2.94 4.8448275862069 42.2888888888889 3 0 0 human, processed_transcript processed_transcript A549@0.166667,AG04450@0.160211,BJ@0.505174,GM12878@35.3303,H1HESC@2.43131,HELAS3@20.3975,HEPG2@4.24015,HMEC@0.75673,HSMM@0.100625,HUVEC@0.148546,K562@0,MCF7@0.113339,NHEK@3.21684,NHLF@0.520539,SKNSHRA@0.52931, 0 0 0 0 ENSG00000206337.6 ENST00000467369.1 chr6:31430962-31445283 2 573 13746 intergenic 4.60 0 1,1,1 1 0,0,1 0 0 0 9.04537521815009 0.276880547068238 2.94 9.31762652705061 11.8761821620835 3 0 0 chimp,human,macaque,marmoset,orangutan, processed_transcript processed_transcript A549@0.166667,AG04450@0.160211,BJ@0.505174,GM12878@35.3303,H1HESC@2.43131,HELAS3@20.3975,HEPG2@4.24015,HMEC@0.75673,HSMM@0.100625,HUVEC@0.148546,K562@0,MCF7@0.113339,NHEK@3.21684,NHLF@0.520539,SKNSHRA@0.52931, 0 0 0 0 ENSG00000234006.1 ENST00000420520.1 chr6:31510081-31510904 2 514 307 exonic 7.72 0 1,1,1 0 0,0,0 19 4.185667752443 27.211 20.3988326848249 5.84690553745928 65.776 21.0817120622568 6.09120521172638 68.663 0 0 chimp,human,macaque,marmoset,orangutan, antisense antisense A549@0.0652815,AG04450@0,BJ@0.007128,GM12878@0.135592,H1HESC@0.0465255,HELAS3@0.221341,HEPG2@0.172237,HMEC@0.018038,HSMM@0.013482,HUVEC@0.011267,K562@0.033732,MCF7@0.025935,NHEK@0.005713,NHLF@0,SKNSHRA@0.07413, 0 0 0 0 ENSG00000234006.1 ENST00000416684.1 chr6:31510150-31510915 2 452 311 exonic -5.99 0 1,1,1 0 0,0,0 13.0774336283186 4.13183279742765 30.809 13.3893805309735 5.77170418006431 69.806 13.8738938053097 6.01286173633441 72.813 0 0 chimp,human,macaque,marmoset,orangutan, antisense antisense A549@0.0652815,AG04450@0,BJ@0.007128,GM12878@0.135592,H1HESC@0.0465255,HELAS3@0.221341,HEPG2@0.172237,HMEC@0.018038,HSMM@0.013482,HUVEC@0.011267,K562@0.033732,MCF7@0.025935,NHEK@0.005713,NHLF@0,SKNSHRA@0.07413, 0 0 0 0 ENSG00000227198.1 ENST00000422049.1 chr6:31626106-31628498 2 671 1719 exonic 1.90 0 1,1,1 0 0,0,0 0 170.885398487493 52.8 42.8897168405365 175.106457242583 131.172 41.0312965722802 166.712623618383 126.9 0 0 chimp,cow,dog,elephant,horse,human,macaque,marmoset,mouse,orangutan,panda,pig,rabbit, antisense antisense A549@0.06499,AG04450@0.019743,BJ@0.012062,GM12878@0.070946,H1HESC@0.0162385,HELAS3@1.00853,HEPG2@3.90038,HMEC@0,HSMM@0,HUVEC@0,K562@0.071501,MCF7@0.0469225,NHEK@0.0115107,NHLF@0.002899,SKNSHRA@0.0742785, 0 0 0 0 ENSG00000235663.1 ENST00000419679.1 chr6:31732087-31733365 2 459 817 exonic -3.99 0 0,0,1 0 0,0,0 64.8518518518518 25.703794369645 32.99 18.483660130719 7.92044063647491 91.705 24.437908496732 3.30477356181151 98.231 0 0 cat,chimp,cow,elephant,horse,human,marmoset,mouse,orangutan,panda,rat, antisense antisense A549@0.260111,AG04450@0.126482,BJ@0.13868,GM12878@0.270001,H1HESC@0.232733,HELAS3@0.270206,HEPG2@1.69883,HMEC@0.124349,HSMM@0.0341325,HUVEC@0.021097,K562@0.188304,MCF7@0.158286,NHEK@0.150479,NHLF@0.075668,SKNSHRA@0.513246, 0 0 0 0 ENSG00000237080.1 ENST00000434689.1 chr6:31851538-31851831 2 221 70 exonic 0 0 0,0,0 0 0,0,0 132.665158371041 337 55.018 129.389140271493 349.828571428571 100.959 164.746606334842 422.285714285714 126.24 0 0 cat,chimp,cow,dog,elephant,guinea_pig,horse,human,macaque,marmoset,orangutan,panda,pig,rabbit,rat, antisense antisense A549@0.009734,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0.112308,HEPG2@0.0191085,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000233627.2 ENST00000458633.1 chr6:31967753-31971298 2 2093 1450 exonic 1.62 0 0,0,0 0 0,0,0 0 26.3724137931034 0 46.0267558528428 103.85724137931 3.107 46.2111801242236 98.52 3.263 0 0 cat,chimp,cow,dog,elephant,horse,human,marmoset,orangutan,panda, antisense antisense A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0.0508445,HEPG2@0.0825485,HMEC@0,HSMM@0,HUVEC@0,K562@0.020652,MCF7@0.0653185,NHEK@0,NHLF@0.081198,SKNSHRA@0, 0 0 0 0 ENSG00000229776.1 ENST00000415626.1 chr6:32000490-32004035 2 2093 1450 exonic 1.62 0 0,0,0 0 0,0,0 40.0301003344482 70.8337931034483 0 54.3282369804109 99.0910344827586 0 49.3511705685619 90.0448275862069 0 0 0 cat,chimp,cow,dog,elephant,horse,human,marmoset,orangutan,panda, antisense antisense A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0.049766,HEPG2@0.08115,HMEC@0,HSMM@0,HUVEC@0,K562@0.019374,MCF7@0.0653185,NHEK@0,NHLF@0.081198,SKNSHRA@0, 0 0 0 0 ENSG00000225914.1 ENST00000425033.1 chr6:32223488-32233615 2 3456 6669 intergenic 4.79 0 0,0,0 0 0,0,0 0 0 0 0 0 0 0 0 0 0 0 chimp,human, antisense antisense A549@0.019891,AG04450@0.049958,BJ@0.021986,GM12878@0.155444,H1HESC@0.392841,HELAS3@0.104056,HEPG2@0.081086,HMEC@0.011841,HSMM@0.003827,HUVEC@0.110551,K562@0.0441345,MCF7@0.0177085,NHEK@0.0119283,NHLF@0.006721,SKNSHRA@0.012256, 0 0 0 0 ENSG00000228962.1 ENST00000426643.1 chr6:32358287-32361463 3 607 2565 exonic -1.69 0 0,0,0 0 0,0,0 0 0 0 0 1.58401559454191 0 0 4.88654970760234 0 0 0 chimp,cow,elephant,horse,human,marmoset,orangutan,panda, antisense antisense A549@0.036874,AG04450@0.037303,BJ@0.039878,GM12878@0.085028,H1HESC@0.211837,HELAS3@0.0572175,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0.0088645,K562@0.011859,MCF7@0.0099625,NHEK@0.0223847,NHLF@0.035008,SKNSHRA@0.0037195, 0 0 0 0 ENSG00000223534.1 ENST00000419852.1 chr6:32627657-32628506 2 550 297 exonic -5.10 0 0,1,0 0 0,0,0 0 0 0 2.60727272727273 20.8922558922559 0 2.73818181818182 20.7777777777778 0 0 0 chimp,cow,dog,elephant,guinea_pig,horse,human,macaque,marmoset,mouse,orangutan,panda, antisense antisense A549@0,AG04450@0,BJ@0,GM12878@0.159946,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000232080.1 ENST00000448198.1 chr6:32685782-32686604 2 379 441 intergenic 4.60 1 0,0,0 0 0,0,0 0 0 0 0 0 0 0 0 0 0 0 chimp,human,orangutan, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000232080.1 ENST00000455328.1 chr6:32685807-32686609 3 393 405 intergenic 6.38 1 0,0,0 0 0,0,0 0 0 0 0 0 0 0 0 0 0 0 chimp,human,orangutan, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000232080.1 ENST00000458375.1 chr6:32686162-32686612 2 300 148 intergenic 4.60 1 0,1,0 0 0,0,0 0 0 0 0 0 0 0 0 0 0 0 chimp,human,orangutan, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000247909.1 ENST00000499196.1 chr6:32862500-32871535 2 3141 5892 intergenic 6.78 0 1,1,1 1 0,0,0 0 0 0 7.95733842725247 27.4422946367957 0 8.32983126392869 29.5738289205703 0 0 1 chimp,human,macaque,orangutan, lincRNA lincRNA A549@4.87283,AG04450@3.39314,BJ@1.73411,GM12878@2.55667,H1HESC@2.50336,HELAS3@7.51285,HEPG2@1.9023,HMEC@2.29172,HSMM@1.58906,HUVEC@1.15744,K562@0.0123325,MCF7@2.30353,NHEK@1.8199,NHLF@3.67946,SKNSHRA@1.73146, 0 0 0 0 ENSG00000223837.1 ENST00000415875.1 chr6:32938080-32938594 2 196 316 intronic 0 0 0,1,1 0 0,0,0 56.6530612244898 0 111.138 60.1836734693878 0 178.638 59.0663265306122 0 160.186 0 0 chimp,dog,human,macaque,marmoset,orangutan,panda, sense_intronic sense_intronic A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0.02029,K562@0,MCF7@0,NHEK@0,NHLF@0.056801,SKNSHRA@0, 0 0 0 0 ENSG00000230313.1 ENST00000414398.1 chr6:33112560-33115544 2 715 2267 intergenic -6.48 0 0,1,0 0 0,0,0 0 0 0 0 0 0 0 0 0 0 0 chimp,human,macaque,marmoset, antisense antisense A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0.150986,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000232940.1 ENST00000450514.1 chr6:33217311-33222721 5 754 4648 exonic -2.00 0 0,1,0 1 0,0,0 59.6816976127321 28.2781841652324 0 103.111405835544 37.7265490533563 0 147.427055702918 45.0352839931153 0 0 0 chimp,human,macaque,marmoset,mouse,opossum,orangutan, antisense antisense A549@0.253551,AG04450@0.25908,BJ@0.150664,GM12878@1.36307,H1HESC@0.169362,HELAS3@0.948716,HEPG2@0.541469,HMEC@0.04117,HSMM@0.0319325,HUVEC@0.217377,K562@0.770863,MCF7@0.163492,NHEK@0.136668,NHLF@0.068645,SKNSHRA@0.573582, 0 0 0 0 ENSG00000232940.1 ENST00000422366.1 chr6:33217361-33219716 4 698 1651 exonic -2.00 0 0,1,0 1 0,0,0 111.925501432665 42.3506965475469 0 181.283667621776 58.5469412477287 0 182.34670487106 68.6305269533616 0 0 0 cat,chimp,dog,guinea_pig,horse,human,macaque,marmoset,mouse,orangutan,panda,pig,rat, antisense antisense A549@0.253551,AG04450@0.25908,BJ@0.150664,GM12878@1.36307,H1HESC@0.169362,HELAS3@0.948716,HEPG2@0.541469,HMEC@0.04117,HSMM@0.0319325,HUVEC@0.217377,K562@0.770863,MCF7@0.163492,NHEK@0.136668,NHLF@0.068645,SKNSHRA@0.573582, 0 0 0 0 ENSG00000232940.1 ENST00000427196.1 chr6:33217373-33222766 5 672 4713 exonic -2.00 0 1,1,1 1 0,0,0 32.1428571428571 32.8531720772332 0 57.7544642857143 45.4674305113516 0 107.090773809524 52.6025885847655 0 0 0 chimp,human,macaque,marmoset,orangutan, antisense antisense A549@0.253551,AG04450@0.25908,BJ@0.150664,GM12878@1.36307,H1HESC@0.169362,HELAS3@0.948716,HEPG2@0.541469,HMEC@0.04117,HSMM@0.0319325,HUVEC@0.217377,K562@0.770863,MCF7@0.163492,NHEK@0.136668,NHLF@0.068645,SKNSHRA@0.573582, 0 0 0 0 ENSG00000232940.1 ENST00000442228.1 chr6:33218056-33219412 2 467 887 exonic 0 0 0,1,0 0 0,0,0 26.9807280513919 109.426155580609 4.18 85.4025695931477 148.285231116122 0 105.620985010707 152.505073280722 0 0 0 cat,chimp,cow,dog,guinea_pig,horse,human,macaque,marmoset,orangutan,panda,pig, antisense antisense A549@0.253551,AG04450@0.25908,BJ@0.150664,GM12878@1.36307,H1HESC@0.169362,HELAS3@0.948716,HEPG2@0.541469,HMEC@0.04117,HSMM@0.0319325,HUVEC@0.217377,K562@0.770863,MCF7@0.163492,NHEK@0.136668,NHLF@0.068645,SKNSHRA@0.573582, 0 0 0 0 ENSG00000197251.3 ENST00000477984.1 chr6:33553883-33561115 2 2105 5125 exonic 5.68 0 1,1,1 0 0,1,0 0 10.8655609756098 0 7.77529691211401 8.60175609756098 0 8.37672209026128 12.3488780487805 0 0 1 chimp,human, antisense antisense A549@0,AG04450@0.0119805,BJ@0.003396,GM12878@0.016382,H1HESC@0.0145745,HELAS3@0.0042895,HEPG2@0,HMEC@0.019433,HSMM@0.0057155,HUVEC@0.00565,K562@0,MCF7@0,NHEK@0.0142333,NHLF@0.0055215,SKNSHRA@0, 0 0 0 0 ENSG00000246981.1 ENST00000500794.1 chr6:33599094-33601413 2 1968 349 intronic 2.21 0 1,1,1 1 0,0,0 10.457825203252 0 0 13.4217479674797 0 4.335 13.8739837398374 0 4.425 0 1 chimp,human,macaque,orangutan, lincRNA lincRNA A549@0.120033,AG04450@0.219376,BJ@0.20638,GM12878@0.010467,H1HESC@0.781342,HELAS3@0.182731,HEPG2@0.466656,HMEC@0.166279,HSMM@0.530042,HUVEC@0.193227,K562@0.0500105,MCF7@0.133445,NHEK@0.026555,NHLF@0.332056,SKNSHRA@0.655455, 0 0 0 0 ENSG00000249346.2 ENST00000525912.1 chr6:33835283-33861430 2 394 25751 intergenic 5.86 1 0,0,0 0 0,0,0 0 9.5312026717409 0 0 8.062211176265 0 0 8.34845248728205 0 0 0 elephant,human,macaque,marmoset,orangutan, lincRNA lincRNA A549@0.012633,AG04450@0,BJ@0.0083175,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0.0007235,HUVEC@0,K562@0.0335345,MCF7@1.77638,NHEK@0,NHLF@0.0030755,SKNSHRA@0, 0 0 0 0 ENSG00000249346.2 ENST00000506222.2 chr6:33857288-33864684 3 3148 4244 intergenic 3.04 1 0,1,0 0 0,0,0 0 0 0 2.82814485387548 1.92318567389255 21.666 2.93138500635324 1.92318567389255 43.229 0 1 chimp,human, lincRNA lincRNA A549@0.012633,AG04450@0,BJ@0.0083175,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0.0007235,HUVEC@0,K562@0.0335345,MCF7@1.77638,NHEK@0,NHLF@0.0030755,SKNSHRA@0, 0 0 0 0 ENSG00000249346.2 ENST00000531046.1 chr6:33859479-33860556 2 820 255 intergenic -4.26 1 0,1,0 0 0,0,0 0 0 0 0 32.0078431372549 0 0 32.0078431372549 0 0 0 chimp,dog,elephant,horse,human,macaque,marmoset,orangutan,panda, lincRNA lincRNA A549@0.012633,AG04450@0,BJ@0.0083175,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0.0007235,HUVEC@0,K562@0.0335345,MCF7@1.77638,NHEK@0,NHLF@0.0030755,SKNSHRA@0, 0 0 0 0 ENSG00000249346.2 ENST00000525746.1 chr6:33859574-33860527 2 708 243 intergenic -4.26 1 0,0,0 0 0,0,0 0 0 0 0 33.5884773662551 0 0 33.5884773662551 0 0 0 cat,chimp,dog,elephant,horse,human,macaque,marmoset,orangutan,panda, lincRNA lincRNA A549@0.012633,AG04450@0,BJ@0.0083175,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0.0007235,HUVEC@0,K562@0.0335345,MCF7@1.77638,NHEK@0,NHLF@0.0030755,SKNSHRA@0, 0 0 0 0 ENSG00000249346.2 ENST00000533304.1 chr6:33860087-33864691 3 589 4011 intergenic 1.40 0 0,1,0 0 0,0,0 0 0 0 0 2.03490401396161 21.666 0 2.03490401396161 43.229 0 0 chimp,dog,elephant,horse,human,macaque,marmoset,orangutan,panda, lincRNA lincRNA A549@0.012633,AG04450@0,BJ@0.0083175,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0.0007235,HUVEC@0,K562@0.0335345,MCF7@1.77638,NHEK@0,NHLF@0.0030755,SKNSHRA@0, 0 0 0 0 ENSG00000233183.2 ENST00000526556.1 chr6:33861100-33882187 2 389 20696 intergenic -0.19 0 0,0,0 0 0,0,0 0 0.350792423656745 0 0 5.68254735214534 8.162 0 6.86393505991496 8.162 0 0 cat,chimp,cow,dog,horse,human,macaque,marmoset,orangutan,panda, lincRNA lincRNA A549@0,AG04450@0.0075715,BJ@0,GM12878@0.0004435,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0.0078895,K562@0.0012255,MCF7@0.000312,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000233183.2 ENST00000451317.2 chr6:33868132-33895408 4 3626 23644 intergenic 6.03 1 0,0,0 0 0,0,0 77.2752344180916 0.725765521908307 0 64.9208494208494 3.38961258670276 0 64.1751241036955 3.5083319235324 0 0 0 chimp,human,macaque,marmoset,orangutan,panda, lincRNA lincRNA A549@0,AG04450@0.0075715,BJ@0,GM12878@0.0004435,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0.0078895,K562@0.0012255,MCF7@0.000312,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000233183.2 ENST00000530000.1 chr6:33878879-33885985 2 6591 513 intergenic 2.80 1 0,1,0 0 0,0,0 2.60355029585799 0 0 4.72098315885298 0 0 4.71370050068275 0 0 0 1 chimp,human,macaque,orangutan, lincRNA lincRNA A549@0,AG04450@0.0075715,BJ@0,GM12878@0.0004435,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0.0078895,K562@0.0012255,MCF7@0.000312,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000225339.1 ENST00000429998.1 chr6:34247482-34252266 1 4784 0 intergenic 1.12 0 0,1,1 0 0,0,0 10.806856187291 0 16.218 6.47658862876254 0 18.739 8.65384615384615 0 19.503 0 0 chimp,horse,human,macaque,marmoset,orangutan, lincRNA processed_transcript A549@0.152057,AG04450@0.130773,BJ@0.123374,GM12878@0.0800885,H1HESC@0.009043,HELAS3@0.079628,HEPG2@0.077687,HMEC@0.049632,HSMM@0.0991695,HUVEC@0.144249,K562@0.24467,MCF7@0.187494,NHEK@0.141942,NHLF@0.427733,SKNSHRA@0.428147, 0 0 0 0 ENSG00000232157.1 ENST00000419956.1 chr6:34252267-34254545 1 2278 0 intergenic 0.67 0 0,0,0 0 0,0,0 22.3244073748903 0 19.84 1.85469710272169 0 2.7 7.41088674275681 0 0 0 0 cat,chimp,dog,human,macaque,marmoset,orangutan,panda, antisense antisense A549@0.066102,AG04450@0.07366,BJ@0.0446245,GM12878@0.0315055,H1HESC@0.005216,HELAS3@0.0121705,HEPG2@0.004441,HMEC@0.01078,HSMM@0.018836,HUVEC@0.0546275,K562@0.073704,MCF7@0.063195,NHEK@0.022783,NHLF@0.0648975,SKNSHRA@0.187273, 0 0 0 0 ENSG00000228559.1 ENST00000450618.1 chr6:35512409-35513446 3 592 441 intergenic 0.62 0 0,0,1 0 0,0,0 0 0 0 0 0 0 0 23.9047619047619 0 0 0 human,macaque,marmoset,orangutan, lincRNA lincRNA A549@0.003648,AG04450@0,BJ@0,GM12878@0,H1HESC@0.620873,HELAS3@0.0116535,HEPG2@0.0366755,HMEC@0.006882,HSMM@0,HUVEC@0,K562@0.0082555,MCF7@0.066394,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000232909.1 ENST00000452048.1 chr6:35701644-35704724 4 665 2409 intergenic 4.72 0 0,1,0 0 0,0,0 5.75037593984962 5.75425487754255 121.808 0 4.70236612702366 91.085 0 5.28476546284765 76.21 0 0 cat,chimp,dog,horse,human,macaque,marmoset,orangutan,pig, antisense antisense A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0.0133265,HELAS3@0.037436,HEPG2@0.0332445,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0.030198, 0 0 0 0 ENSG00000246982.2 ENST00000526611.1 chr6:36114475-36164980 4 583 49916 intronic -2.23 1 1,1,1 1 0,0,0 73.9897084048027 9.96347864412213 70.154 76.1337907375643 13.7845981248497 68.093 72.4253859348199 14.28077169645 70.267 0 0 chimp,cow,elephant,guinea_pig,horse,human,macaque,marmoset,orangutan,pig,rabbit, lincRNA processed_transcript A549@0.087947,AG04450@0.0314405,BJ@0.040165,GM12878@0.402299,H1HESC@0.0352395,HELAS3@0.0563965,HEPG2@0.334047,HMEC@0.016881,HSMM@0.008364,HUVEC@0.00835,K562@0.350568,MCF7@0.187074,NHEK@0.0481397,NHLF@0.020481,SKNSHRA@0.274333, 0 0 0 0 ENSG00000246982.2 ENST00000499560.2 chr6:36125845-36164982 4 1226 37905 intronic 3.31 1 1,1,1 1 0,0,0 59.0815660685155 10.545574462472 70.154 40.047308319739 16.1876005803984 68.093 41.9347471451876 16.3557578155916 70.267 0 0 cat,chimp,cow,dog,elephant,guinea_pig,horse,human,macaque,marmoset,mouse,orangutan,panda,pig,rabbit,rat, lincRNA processed_transcript A549@0.087947,AG04450@0.0314405,BJ@0.040165,GM12878@0.402299,H1HESC@0.0352395,HELAS3@0.0563965,HEPG2@0.334047,HMEC@0.016881,HSMM@0.008364,HUVEC@0.00835,K562@0.350568,MCF7@0.187074,NHEK@0.0481397,NHLF@0.020481,SKNSHRA@0.274333, 0 0 0 0 ENSG00000224666.2 ENST00000411643.1 chr6:36354608-36359771 2 317 4844 exonic 2.54 0 1,1,1 0 0,0,0 14.5110410094637 4.00474814203138 0 20.1324921135647 9.96139554087531 4.416 19.9589905362776 11.1269611890999 8.96 0 0 chimp,cow,dog,elephant,horse,human,macaque,marmoset,orangutan,panda,pig,rabbit, antisense antisense A549@0,AG04450@0.0281045,BJ@0,GM12878@0,H1HESC@0.009316,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0.012748,NHEK@0,NHLF@0,SKNSHRA@0.0071125, 0 0 0 0 ENSG00000232598.1 ENST00000427609.1 chr6:36907863-36912451 2 477 4109 intronic -3.31 0 0,0,1 0 0,0,0 0 0 0 0 0 0 0 0 0 0 0 cat,chimp,dog,horse,human,macaque,marmoset,orangutan,panda, antisense antisense A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0.016005,HEPG2@0.0219345,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000229559.1 ENST00000445172.1 chr6:37511329-37514531 3 732 2466 intergenic 0.26 0 0,0,1 0 0,0,0 97.5614754098361 0 0 100.469945355191 4.21532846715328 4.59 234.657103825137 4.28345498783455 75.608 0 0 chimp,dog,horse,human,macaque,marmoset,orangutan,rat, lincRNA lincRNA A549@0.018354,AG04450@0,BJ@0,GM12878@0.45619,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0.013751, 0 0 0 0 ENSG00000231872.1 ENST00000434901.1 chr6:37514328-37515490 3 511 647 intergenic -1.14 0 0,0,0 0 0,0,0 0 0 0 25.4833659491194 0 3.24 355.084148727984 1.94744976816074 3.336 0 0 cat,chimp,cow,dog,elephant,guinea_pig,horse,human,macaque,marmoset,mouse,opossum,orangutan,panda,pig,rabbit,rat, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0.109898,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000227920.1 ENST00000414875.1 chr6:37517780-37518636 2 440 414 intergenic 9.00 1 0,0,1 0 0,0,0 0 63.7777777777778 0 15.875 116.113526570048 2.151 12.0431818181818 125.828502415459 2.187 0 0 chimp,horse,human,macaque,marmoset,orangutan,panda, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0.614783,H1HESC@0.0178625,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0.023398, 0 0 0 0 ENSG00000225945.1 ENST00000415890.1 chr6:37783553-37786994 3 416 3021 intergenic 1.76 1 0,0,0 0 0,0,0 152.899038461538 45.5233366434955 104.573 67.3918269230769 27.732207878186 380.748 69.53125 24.2277391592188 354.259 0 0 chimp,human,marmoset,orangutan,pig,rabbit, antisense antisense A549@0.060327,AG04450@0.120478,BJ@0.149323,GM12878@0.780103,H1HESC@0.187418,HELAS3@0.655414,HEPG2@0.655699,HMEC@0.068407,HSMM@0.0655575,HUVEC@0.225438,K562@0.285037,MCF7@0.565136,NHEK@0.0403153,NHLF@0.0139185,SKNSHRA@0.324263, 0 0 0 0 ENSG00000232932.1 ENST00000448738.1 chr6:38130577-38131580 2 437 564 intergenic -3.18 0 0,0,0 0 0,0,0 0 0 0 0 0 0 0 0 0 0 0 human,macaque,marmoset,orangutan, lincRNA lincRNA A549@0,AG04450@0.0051055,BJ@0.014743,GM12878@0.004592,H1HESC@0.0047255,HELAS3@0,HEPG2@0.048911,HMEC@0,HSMM@0,HUVEC@0.0182485,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0.017431, 0 0 0 0 ENSG00000226533.1 ENST00000412822.1 chr6:38449468-38450307 2 558 279 intronic -24.71 0 0,0,0 0 0,0,0 0 301.075268817204 76.446 8.48387096774194 271.046594982079 74.927 13.1290322580645 281.681003584229 83.75 0 0 cat,chimp,cow,dog,horse,human,macaque,marmoset,orangutan,panda,pig,rabbit, antisense antisense A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000236355.1 ENST00000439844.1 chr6:38681827-38682993 2 398 766 intergenic -22.55 0 0,0,1 0 0,0,0 0 0 10.34 0 0 6.645 0 0 9.228 0 0 cat,chimp,human,macaque,marmoset,orangutan, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0.029695,MCF7@0,NHEK@0.00319133,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000231150.1 ENST00000418399.1 chr6:38890805-38899147 3 750 7588 exonic -1.13 0 0,0,0 0 0,0,0 120.950666666667 38.7615972588297 77.996 109.518666666667 41.3464681075382 85.916 108.213333333333 46.77872957301 93.953 0 0 cat,chimp,cow,dog,elephant,guinea_pig,horse,human,macaque,marmoset,mouse,opossum,orangutan,pig,rabbit,rat, antisense antisense A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000231150.1 ENST00000416948.1 chr6:38890805-38920875 4 826 29238 exonic -1.13 0 0,1,0 0 0,0,0 109.822033898305 30.9589575210343 0 99.4418886198547 32.6496682399617 3.346 98.2566585956417 36.9374102195773 7.279 0 0 cat,chimp,cow,dog,elephant,guinea_pig,horse,human,macaque,marmoset,opossum,orangutan,pig,rabbit, antisense antisense A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000231150.1 ENST00000453417.1 chr6:38897126-38900693 3 380 3183 exonic -3.86 0 0,0,0 0 0,0,0 127.468421052632 38.9195727301288 5.643 147.263157894737 50.9010367577757 1.488 146.576315789474 58.4624568017593 1.554 0 0 cat,chimp,cow,dog,elephant,guinea_pig,horse,human,macaque,marmoset,mouse,opossum,orangutan,panda,pig,rabbit,rat, antisense antisense A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000235033.2 ENST00000430595.1 chr6:39856566-39865129 4 634 7923 exonic 2.26 0 0,0,0 0 0,0,0 146.162460567823 26.6034330430393 0 195.391167192429 23.6908999116496 0 189.358044164038 25.0985737725609 0 0 0 cat,chimp,dog,elephant,horse,human,macaque,marmoset,opossum,orangutan,panda,rabbit, antisense antisense A549@0,AG04450@0.0795835,BJ@0.0428475,GM12878@0.061556,H1HESC@0.0348805,HELAS3@0,HEPG2@0.0135235,HMEC@0,HSMM@0,HUVEC@0.01946,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0.113857, 0 0 0 0 ENSG00000235033.2 ENST00000420293.1 chr6:39856650-39865156 3 437 8065 exonic 2.26 0 0,0,1 0 0,0,0 130.816933638444 30.5367637941724 0 148.633867276888 30.2117792932424 0 153.379862700229 30.9616862988221 0 0 0 cat,chimp,cow,elephant,guinea_pig,horse,human,macaque,marmoset,opossum,orangutan,panda,rabbit, antisense antisense A549@0,AG04450@0.0795835,BJ@0.0428475,GM12878@0.061556,H1HESC@0.0348805,HELAS3@0,HEPG2@0.0135235,HMEC@0,HSMM@0,HUVEC@0.01946,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0.113857, 0 0 0 0 ENSG00000240126.1 ENST00000437947.1 chr6:39865116-39867847 3 433 2294 intronic -4.66 0 0,0,0 0 0,0,0 5.94919168591224 11.9032258064516 52.256 0 11.8587619877942 51.378 1.79445727482679 13.4551002615519 58.938 0 0 chimp,human,macaque,marmoset,orangutan, processed_transcript processed_transcript A549@0,AG04450@0,BJ@0.034606,GM12878@0.105158,H1HESC@0.0414195,HELAS3@0,HEPG2@0.014744,HMEC@0,HSMM@0.0476775,HUVEC@0,K562@0,MCF7@0.0408605,NHEK@0,NHLF@0,SKNSHRA@0.0123355, 0 0 0 0 ENSG00000227131.1 ENST00000444731.1 chr6:40239305-40243976 3 536 4131 intergenic 2.04 0 0,0,0 0 0,0,0 0 0 86.106 0 0 82.506 0 0 74.037 0 0 chimp,human,macaque,marmoset,orangutan, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0.0230925,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0.0084185, 0 0 0 0 ENSG00000204091.3 ENST00000451810.1 chr6:40302693-40347624 3 914 44013 intergenic -4.14 1 0,0,1 0 0,0,0 75.6630196936543 7.27348737872901 0 96.4814004376367 6.20737054961034 2.84 90.6838074398249 7.36770954036308 8.47 0 0 chimp,elephant,human,macaque,marmoset,orangutan, antisense antisense A549@0.0021385,AG04450@0,BJ@0,GM12878@0,H1HESC@0.701936,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0.0037225,HUVEC@0,K562@0.200539,MCF7@0.0027745,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000204091.3 ENST00000448559.1 chr6:40308204-40347624 2 739 38679 intergenic -4.14 1 0,0,1 0 0,0,0 0 7.71692649758267 0 12.4194857916103 3.93365909149668 33.443 14.8971583220568 4.91519946224049 38.617 0 0 chimp,elephant,horse,human,macaque,marmoset,orangutan,panda, antisense antisense A549@0.0021385,AG04450@0,BJ@0,GM12878@0,H1HESC@0.701936,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0.0037225,HUVEC@0,K562@0.200539,MCF7@0.0027745,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000204092.2 ENST00000373171.2 chr6:40312083-40313890 2 552 1253 intergenic -1.95 1 0,1,0 0 0,0,0 0 25.7222665602554 0 5.5 30.7525937749401 0 5.53985507246377 32.779728651237 0 0 0 NA lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0.489306,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0.012344,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0.128456, 0 0 0 0 ENSG00000226070.1 ENST00000447315.1 chr6:40326483-40337213 2 822 9906 intergenic 1.67 0 0,0,0 0 0,0,0 0 15.5432061376943 0 0 3.10054512416717 0 0 5.2712497476277 0 0 0 cat,chimp,cow,horse,human,macaque,marmoset,orangutan,panda, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0.435944,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0.0310605, 0 0 0 0 ENSG00000204091.3 ENST00000373170.2 chr6:40346076-40347624 2 1163 383 intergenic 5.03 1 1,1,1 1 0,0,0 0 0 0 7.89165950128977 0 5.757 9.46603611349957 0 5.821 1 1 chimp,human,macaque,marmoset,orangutan, antisense antisense A549@0.0021385,AG04450@0,BJ@0,GM12878@0,H1HESC@0.701936,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0.0037225,HUVEC@0,K562@0.200539,MCF7@0.0027745,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000204091.3 ENST00000448433.1 chr6:40346076-40347624 3 1012 532 intergenic 5.03 1 1,1,1 1 0,0,0 0 0 0 9.06916996047431 0 5.757 10.8784584980237 0 5.821 0 0 chimp,human,macaque,marmoset,orangutan, antisense antisense A549@0.0021385,AG04450@0,BJ@0,GM12878@0,H1HESC@0.701936,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0.0037225,HUVEC@0,K562@0.200539,MCF7@0.0027745,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000236075.1 ENST00000414505.1 chr6:40469370-40470132 2 290 470 intronic 1.37 0 0,0,0 0 0,0,0 0 0 0 0 0 0 0 0 0 0 0 chimp,human,macaque,marmoset,orangutan, sense_intronic sense_intronic A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000226454.1 ENST00000442781.1 chr6:40484075-40491672 3 418 7175 intronic -6.76 0 0,0,0 0 0,0,0 0 11.3177700348432 0 0 16.8648083623693 1.195 0 19.5411846689895 1.458 0 0 cat,chimp,elephant,human,macaque,marmoset,orangutan,pig, sense_intronic sense_intronic A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000237947.1 ENST00000438818.1 chr6:40681150-40683102 3 610 1338 intergenic -0.95 0 0,1,1 0 0,0,0 38.0065573770492 0 151.036 28.2622950819672 0 69.857 29.0622950819672 1.45291479820628 63.56 0 0 cat,chimp,cow,dog,elephant,guinea_pig,horse,human,macaque,marmoset,panda,pig, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000228342.1 ENST00000440573.1 chr6:41107594-41108570 2 447 527 intergenic -8.01 0 0,1,1 0 0,0,0 69.0939597315436 0 0 168.442953020134 8.3719165085389 2.39 154.534675615213 8.89184060721063 2.187 0 0 cat,chimp,cow,dog,elephant,horse,human,macaque,marmoset,orangutan,panda,pig,rabbit, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0.0144423,NHLF@0,SKNSHRA@0.005062, 0 0 0 0 ENSG00000228342.1 ENST00000435541.1 chr6:41107665-41108570 2 512 391 intergenic -18.18 0 0,1,0 0 0,0,0 11.09375 0 0 78.642578125 5.37084398976982 2.39 69.740234375 5.44757033248082 2.187 0 0 cat,chimp,cow,dog,elephant,horse,human,macaque,marmoset,orangutan,panda,pig,rabbit, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0.0144423,NHLF@0,SKNSHRA@0.005062, 0 0 0 0 ENSG00000228342.1 ENST00000432833.1 chr6:41107801-41108570 2 376 391 intergenic -18.18 0 0,1,0 0 0,0,0 0 0 0 70.438829787234 5.37084398976982 2.39 59.6994680851064 5.44757033248082 2.187 0 0 cat,chimp,cow,dog,elephant,horse,human,macaque,marmoset,orangutan,panda,pig,rabbit, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0.0144423,NHLF@0,SKNSHRA@0.005062, 0 0 0 0 ENSG00000234753.1 ENST00000440194.1 chr6:41462591-41513981 2 194 51194 intergenic 0 0 0,1,0 1 0,0,0 237.216494845361 49.2304371606048 273.87 264.40206185567 54.599679649959 333.829 268.396907216495 56.4967964995898 347.227 0 0 cat,chimp,cow,elephant,human,marmoset,orangutan,panda,pig,rabbit,rat, antisense antisense A549@0.389278,AG04450@0.0281815,BJ@0.0349715,GM12878@0.945014,H1HESC@0.0403365,HELAS3@0.576377,HEPG2@2.26072,HMEC@0.029317,HSMM@0.081213,HUVEC@0.0405865,K562@1.73908,MCF7@0.204468,NHEK@0.0342147,NHLF@0.00921,SKNSHRA@0.135523, 0 0 0 0 ENSG00000226917.1 ENST00000416951.1 chr6:41470182-41487590 3 813 16591 intergenic 2.15 0 0,1,1 0 0,0,0 244.70110701107 56.0561750346574 0 147.471094710947 63.9488276776566 3.24 147.528905289053 66.5660297751793 3.336 0 0 chimp,cow,dog,elephant,horse,human,macaque,opossum,panda,rabbit, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0.0024705,H1HESC@0,HELAS3@0.0063245,HEPG2@0.0234015,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000226917.1 ENST00000448211.1 chr6:41486111-41487590 2 658 819 intergenic -6.18 0 0,0,1 0 0,0,0 249.493920972644 0 13.2 159.183890577508 7.0989010989011 21.183 164.151975683891 7.05494505494505 33.138 0 0 chimp,cow,dog,elephant,horse,human,macaque,orangutan,pig, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0.0024705,H1HESC@0,HELAS3@0.0063245,HEPG2@0.0234015,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000234753.1 ENST00000414386.1 chr6:41491633-41513914 2 417 21862 intergenic -2.68 1 1,1,1 1 0,0,0 502.517985611511 27.944515597841 296.82 641.194244604317 31.7756380934956 350.905 672.942446043165 33.4636355319733 369.605 0 0 cat,cow,dog,elephant,guinea_pig,horse,human,macaque,marmoset,mouse,opossum,orangutan,panda,pig,platypus,rabbit,rat, antisense antisense A549@0.389278,AG04450@0.0281815,BJ@0.0349715,GM12878@0.945014,H1HESC@0.0403365,HELAS3@0.576377,HEPG2@2.26072,HMEC@0.029317,HSMM@0.081213,HUVEC@0.0405865,K562@1.73908,MCF7@0.204468,NHEK@0.0342147,NHLF@0.00921,SKNSHRA@0.135523, 0 0 0 0 ENSG00000234753.1 ENST00000454812.1 chr6:41491633-41516359 2 573 24151 intronic 1.84 1 1,1,1 0 0,0,0 375.675392670157 38.7349178087864 29.23 454.973821989529 46.4591114239576 43.736 474.55497382199 48.795991884394 29.515 0 0 dog,horse,human,macaque,panda,rat, antisense antisense A549@0.389278,AG04450@0.0281815,BJ@0.0349715,GM12878@0.945014,H1HESC@0.0403365,HELAS3@0.576377,HEPG2@2.26072,HMEC@0.029317,HSMM@0.081213,HUVEC@0.0405865,K562@1.73908,MCF7@0.204468,NHEK@0.0342147,NHLF@0.00921,SKNSHRA@0.135523, 0 0 0 0 ENSG00000234753.1 ENST00000439386.1 chr6:41491635-41513812 2 402 21773 intergenic 5.04 1 1,1,1 1 0,0,0 529.532338308458 27.8327745372709 281.281 655.480099502488 31.6818536719791 344.173 681.293532338308 33.4139989895742 368.786 0 0 cat,cow,dog,elephant,guinea_pig,horse,human,macaque,marmoset,mouse,opossum,orangutan,panda,pig,platypus,rabbit,rat, antisense antisense A549@0.389278,AG04450@0.0281815,BJ@0.0349715,GM12878@0.945014,H1HESC@0.0403365,HELAS3@0.576377,HEPG2@2.26072,HMEC@0.029317,HSMM@0.081213,HUVEC@0.0405865,K562@1.73908,MCF7@0.204468,NHEK@0.0342147,NHLF@0.00921,SKNSHRA@0.135523, 0 0 0 0 ENSG00000234753.1 ENST00000432751.1 chr6:41491643-41515286 2 407 23234 intronic 2.67 1 1,1,1 0 0,0,0 499.262899262899 39.0695962813119 33.728 621.130221130221 46.618102780408 38.909 647.862407862408 49.0225961952311 39.481 0 0 cat,cow,dog,elephant,guinea_pig,horse,human,macaque,marmoset,mouse,opossum,orangutan,panda,pig,platypus,rabbit,rat, antisense antisense A549@0.389278,AG04450@0.0281815,BJ@0.0349715,GM12878@0.945014,H1HESC@0.0403365,HELAS3@0.576377,HEPG2@2.26072,HMEC@0.029317,HSMM@0.081213,HUVEC@0.0405865,K562@1.73908,MCF7@0.204468,NHEK@0.0342147,NHLF@0.00921,SKNSHRA@0.135523, 0 0 0 0 ENSG00000231102.1 ENST00000438967.1 chr6:41688134-41701770 2 406 13228 intronic 3.36 0 0,1,0 0 0,0,0 0 26.4265195040822 0 10.2266009852217 22.4792863622619 3.806 16.3694581280788 22.6973087390384 6.575 0 0 cat,chimp,cow,dog,elephant,human,macaque,mouse,orangutan,rat, antisense antisense A549@0,AG04450@0,BJ@0,GM12878@0.054705,H1HESC@0,HELAS3@0.0195145,HEPG2@0,HMEC@0,HSMM@0.045851,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000227516.1 ENST00000417465.1 chr6:41836360-41837469 2 401 706 intronic 0 0 0,0,1 0 0,0,0 0 0 0 0 0 3.346 0 3.09773371104816 7.402 0 0 chimp,human,macaque,orangutan, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000223946.1 ENST00000412701.1 chr6:41997791-41999120 2 159 1168 exonic 0 0 0,0,0 0 0,0,0 0 76.8390410958904 0 0 92.8210616438356 0 0 95.3809931506849 0 0 0 chimp,elephant,human,macaque,marmoset,orangutan, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0.014422,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000236163.1 ENST00000440880.1 chr6:42756998-42759057 2 1728 329 intronic -0.19 0 0,0,1 0 0,0,0 0 0 0 2.09259259259259 0 6.9 2.109375 0 7.1 0 0 chimp,human,macaque,marmoset,orangutan, sense_intronic sense_intronic A549@0.11547,AG04450@0.0660555,BJ@0.0559435,GM12878@0.280259,H1HESC@0.119002,HELAS3@0.274147,HEPG2@0.264889,HMEC@0.003019,HSMM@0.0218065,HUVEC@0.0879695,K562@0.386014,MCF7@0.399968,NHEK@0.0478337,NHLF@0.0324585,SKNSHRA@0.17291, 0 0 0 0 ENSG00000231113.1 ENST00000450671.1 chr6:42908102-42911708 4 675 2925 intergenic -1.48 0 0,0,1 0 0,0,0 0 0 0 0 5.82735042735043 6.515 0 5.80410256410256 16.433 0 0 chimp,human,marmoset,orangutan, antisense antisense A549@1.47076,AG04450@0.874851,BJ@1.05765,GM12878@2.87174,H1HESC@2.27396,HELAS3@1.76341,HEPG2@2.12815,HMEC@0.512582,HSMM@0.845214,HUVEC@1.90077,K562@1.23056,MCF7@1.42065,NHEK@0.891181,NHLF@0.67162,SKNSHRA@3.0008, 0 0 0 0 ENSG00000245261.1 ENST00000500590.1 chr6:43181539-43191598 2 978 9079 exonic 5.11 0 0,0,1 0 0,0,0 93.8773006134969 72.9925101883467 63.744 124.58282208589 79.733340676286 87.928 141.953987730061 83.0142086132834 88.548 1 1 chimp,human,macaque,marmoset,orangutan, antisense antisense A549@0.28114,AG04450@0.117633,BJ@0.027612,GM12878@2.57676,H1HESC@0.423763,HELAS3@1.0934,HEPG2@1.39583,HMEC@0.242114,HSMM@0.012426,HUVEC@0.061853,K562@0.72497,MCF7@0.277814,NHEK@0.124807,NHLF@0.0178305,SKNSHRA@0.170713, 0 0 0 0 ENSG00000203362.2 ENST00000417591.1 chr6:43555967-43559099 2 988 2142 intronic -1.21 0 0,0,0 0 0,0,0 0 0 0 0 0 0 0 0 0 0 0 chimp,human,macaque,marmoset, antisense antisense A549@0,AG04450@0,BJ@0,GM12878@0.005908,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000236961.1 ENST00000424283.1 chr6:43690523-43705571 3 345 14699 intergenic 6.04 1 0,1,0 0 0,0,0 86 21.2221239540105 0 252.872463768116 21.9899993196816 7.219 249.197101449275 23.9744880604123 7.487 0 0 chimp,cow,horse,human,orangutan,panda,pig,rabbit, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0.0057925,H1HESC@0,HELAS3@0.0119945,HEPG2@0,HMEC@0.011766,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0.011239,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000223469.1 ENST00000451910.1 chr6:43819494-43820070 2 392 182 intergenic -6.41 0 0,0,0 0 0,0,0 0 0 15.134 10.5714285714286 0 18.837 12.9234693877551 0 27.415 0 0 cat,chimp,cow,human,macaque,marmoset,orangutan,panda,pig, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0.0057585, 0 0 0 0 ENSG00000237686.1 ENST00000422059.1 chr6:43963460-44042389 5 2227 76694 exonic 1.85 1 1,1,1 1 0,0,0 20.8801077682982 24.1972253370537 25.44 11.0758868432869 21.8800036508723 40.991 11.6910642119443 24.1844864005007 41.024 0 0 chimp,horse,human,macaque,marmoset,orangutan, lincRNA processed_transcript A549@0.50481,AG04450@0.13557,BJ@0.060008,GM12878@0.434235,H1HESC@0.513868,HELAS3@1.13446,HEPG2@0.309995,HMEC@0.15043,HSMM@0.166287,HUVEC@0.005691,K562@0.335182,MCF7@0.013777,NHEK@0.0111547,NHLF@0.126952,SKNSHRA@0.134248, 0 0 0 0 ENSG00000231881.1 ENST00000455005.1 chr6:44041650-44045689 2 1606 2431 intergenic 5.79 1 0,0,1 0 0,0,0 88.7372353673723 117.237762237762 86.932 65.807596513076 99.4874537227478 91.619 70.3636363636364 96.4352118469766 96.706 0 0 dog,elephant,horse,human,macaque,marmoset,orangutan,panda,pig, lincRNA lincRNA A549@0.0711645,AG04450@0.0262675,BJ@0.0225625,GM12878@0.31067,H1HESC@0.116126,HELAS3@0.282575,HEPG2@0.823587,HMEC@0,HSMM@0,HUVEC@0,K562@0.081637,MCF7@0.064908,NHEK@0,NHLF@0,SKNSHRA@0.047765, 0 0 0 0 ENSG00000237530.1 ENST00000436113.1 chr6:44492996-44494491 3 470 1021 intergenic 1.21 0 0,0,0 0 0,0,0 0 15.7884427032321 7.48 0 0 5.384 0 0 21.206 0 0 chimp,elephant,horse,human,marmoset, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0.03092,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0.0040795,SKNSHRA@0, 0 0 0 0 ENSG00000230554.1 ENST00000448320.1 chr6:45227825-45228305 2 421 57 intronic -11.26 0 0,0,0 0 0,0,0 157.596199524941 342 0 224.054631828979 512.842105263158 0 215.845605700713 512.842105263158 0 0 0 cat,chimp,cow,dog,elephant,guinea_pig,horse,human,macaque,marmoset,mouse,opossum,orangutan,panda,pig,rabbit,rat, sense_intronic sense_intronic A549@0.019535,AG04450@0.0185785,BJ@0,GM12878@0.004215,H1HESC@0.0477195,HELAS3@0.0283265,HEPG2@0.0520265,HMEC@0,HSMM@0,HUVEC@0.009525,K562@0.0874505,MCF7@0,NHEK@0.00332267,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000231769.1 ENST00000444038.1 chr6:46064830-46097328 3 450 32044 intergenic 0.76 0 0,1,1 0 0,0,0 0 0.693359131194607 0 5.66666666666667 1.30367619523156 6.456 6.04444444444444 3.06247659468231 7.332 0 0 chimp,horse,human,macaque,marmoset,orangutan, antisense antisense A549@0,AG04450@0,BJ@0,GM12878@0.059302,H1HESC@0.0045795,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0.004542,HUVEC@0,K562@0,MCF7@0.004438,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000231769.1 ENST00000437249.1 chr6:46070305-46097443 3 364 26770 intergenic -4.21 0 0,0,0 0 0,0,0 0 0.829958909226746 0 0 0.849383638401195 6.456 0 2.94041837878222 7.332 0 0 chimp,horse,human,macaque,orangutan,rabbit, antisense antisense A549@0,AG04450@0,BJ@0,GM12878@0.059302,H1HESC@0.0045795,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0.004542,HUVEC@0,K562@0,MCF7@0.004438,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000236466.1 ENST00000415787.1 chr6:46459789-46500495 3 619 40083 intergenic 0.87 0 0,0,0 0 0,0,0 4.73344103392569 13.4377167377691 117.624 0 12.9469101614151 146.63 0 14.4340742958361 134.136 0 0 chimp,cow,elephant,horse,human,macaque,marmoset,orangutan,panda, antisense antisense A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0.0066705,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0.003308,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0.0062045,SKNSHRA@0, 0 0 0 0 ENSG00000228402.1 ENST00000418138.1 chr6:46556001-46575916 2 388 19525 intronic -4.96 0 0,0,0 0 0,0,0 0 2.85475032010243 156.74 0 5.70304737516005 105.869 0 8.78458386683739 92.132 0 0 chimp,cow,dog,horse,human,macaque,marmoset,orangutan,panda,pig,rabbit, antisense antisense A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000242973.1 ENST00000422284.1 chr6:46638181-46655537 2 341 17013 intronic 0 0 0,0,1 0 0,0,0 0 34.9581496502674 34.006 30.4281524926686 25.2387585963675 66.576 15.099706744868 26.2456356903544 65.496 0 0 chimp,dog,elephant,human,macaque,orangutan,panda,rabbit, processed_transcript processed_transcript A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000230062.3 ENST00000536046.1 chr6:46714699-46726942 5 995 11240 intergenic 19.44 0 0,0,1 0 0,0,1 94.1859296482412 0.293149466192171 0 156.489447236181 1.60266903914591 10.568 158.300502512563 4.30827402135231 10.663 0 0 cat,chimp,dog,horse,human,macaque,marmoset,orangutan,panda,rabbit,rat, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0.0123135,HELAS3@0.008348,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0.004212,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000230062.3 ENST00000445060.1 chr6:46721483-46726161 2 2549 2127 intergenic 0.99 1 0,0,0 0 0,0,1 12.1271086700667 1.07945463093559 1.088 29.5896429972538 2.94734367653973 4.635 63.5747351902707 4.77150916784203 4.35 0 0 cat,chimp,cow,horse,human,marmoset,orangutan, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0.0123135,HELAS3@0.008348,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0.004212,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000236164.1 ENST00000438738.1 chr6:46726033-46728895 2 759 2101 intergenic 0.41 0 0,0,0 0 0,0,0 14.703557312253 0 0 24.4532279314888 1.3136601618277 0 30.9486166007905 2.3165159447882 0 0 0 cat,chimp,cow,dog,elephant,horse,human,macaque,marmoset,orangutan,pig, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000225730.1 ENST00000451135.1 chr6:46871208-46876815 4 777 4824 intronic 1.24 0 0,1,0 0 0,0,0 0 3.14324212271973 6.897 0 5.82815091210614 19.97 4.69111969111969 7.68511608623549 24.01 0 0 chimp,horse,human,macaque,marmoset,orangutan,pig, antisense antisense A549@0.0027795,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000225515.1 ENST00000412489.1 chr6:47495926-47496397 2 336 133 intronic -7.47 0 0,0,0 0 0,0,0 0 0 0 0 0 5.497 0 0 5.957 0 0 chimp,human,orangutan, antisense antisense A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000226594.1 ENST00000446733.1 chr6:47697563-47708477 2 195 10717 intergenic 0 0 0,0,0 0 0,0,0 0 1.72660259400952 54.991 0 1.20285527666325 46.946 0 1.43500979751796 46.343 0 0 horse,human,macaque,orangutan, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000240789.1 ENST00000423040.1 chr6:49784468-49785198 2 158 570 intergenic 0 0 0,0,0 0 0,0,0 0 0 0 0 0 0 0 0 0 0 0 chimp,human,macaque,orangutan, antisense antisense A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000235122.2 ENST00000437859.1 chr6:49785143-49788155 3 378 2630 intergenic 2.11 0 0,0,1 0 0,0,0 0 0 0 0 0 0 0 0 0 0 0 chimp,human,macaque,marmoset,orangutan, antisense antisense A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000226707.1 ENST00000430821.1 chr6:49791425-49792495 3 397 669 intergenic -7.16 0 0,0,1 0 0,0,0 0 0 0 0 0 0 0 0 0 0 0 chimp,human,macaque,marmoset,orangutan, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000226733.1 ENST00000415106.1 chr6:50061424-50066995 2 690 4879 intergenic -1.35 1 0,0,1 0 0,0,0 298.521739130435 56.8723098995696 407.771 291.084057971015 78.2689075630252 493.772 284.511594202899 61.2488214798114 524.548 0 0 cat,chimp,cow,dog,elephant,guinea_pig,horse,human,macaque,marmoset,mouse,opossum,orangutan,panda,pig,platypus,rabbit,rat, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0.0033875,H1HESC@0,HELAS3@0.012064,HEPG2@0.594412,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000233470.1 ENST00000426547.1 chr6:50481748-50488817 2 283 6784 intergenic -3.66 0 0,0,0 0 0,0,0 245.003533568905 71.4442806603774 26.25 231.565371024735 73.0210790094339 47.826 270.159010600707 73.6379716981132 40.307 0 0 cat,chimp,cow,dog,elephant,guinea_pig,horse,human,macaque,marmoset,opossum,orangutan,panda,pig,rabbit, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000230472.1 ENST00000431394.1 chr6:50555320-50604578 5 441 48809 intergenic 3.09 1 0,0,0 0 0,0,0 39.1292517006803 34.3624946218935 88.528 20.7619047619048 32.2277858591653 57.025 22.5532879818594 34.6009547419533 88.416 0 0 chimp,cow,dog,horse,human,macaque,marmoset,orangutan,panda,rabbit, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000230472.1 ENST00000454135.1 chr6:50566304-50604918 4 558 38050 intergenic 2.27 1 0,0,0 0 0,0,0 186.333333333333 31.2229960578187 88.528 191.204301075269 26.122049934297 57.025 208.245519713262 27.2538239159001 88.416 0 0 chimp,dog,horse,human,macaque,marmoset,mouse,orangutan,platypus,rabbit,rat, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000228689.1 ENST00000454361.1 chr6:51470063-51487682 2 608 17009 intronic 2.01 0 0,0,0 0 0,0,0 0 50.9764830383914 0 0 34.0637897583632 0 0 36.6078546651773 0 0 0 chimp,cow,dog,elephant,horse,human,macaque,marmoset,orangutan,panda,rabbit, antisense antisense A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0.00432867,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000225613.1 ENST00000418518.1 chr6:52011612-52016223 4 514 4091 intergenic -0.54 0 0,1,0 0 0,0,0 0 17.1180640430213 0 0 20.8552921046199 0 0 22.9242239061354 0 0 0 chimp,human,macaque,marmoset,orangutan,rabbit, lincRNA lincRNA A549@0.0053325,AG04450@0,BJ@0,GM12878@0,H1HESC@0.044913,HELAS3@0.030741,HEPG2@0,HMEC@0,HSMM@0.043578,HUVEC@0,K562@0,MCF7@0.121926,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000231577.1 ENST00000449181.1 chr6:52262356-52262946 2 233 355 intronic 0 0 0,0,1 0 0,0,0 0 0 0 0 8.14929577464789 0 7.30042918454936 8.42816901408451 0 0 0 chimp,dog,elephant,horse,human,macaque,marmoset,orangutan,panda, sense_intronic sense_intronic A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000225791.1 ENST00000453216.1 chr6:52442283-52444325 3 661 1377 intergenic 0.20 0 0,1,0 1 0,0,0 0 27.2331154684096 148.936 1.80786686838124 9.56572258533043 210.982 1.83812405446293 9.70007262164125 220.928 0 0 chimp,cow,dog,elephant,guinea_pig,horse,human,macaque,marmoset,orangutan,panda,pig, lincRNA processed_transcript A549@2.40787,AG04450@2.92748,BJ@3.71717,GM12878@1.84807,H1HESC@1.88562,HELAS3@2.66017,HEPG2@3.1055,HMEC@0.752326,HSMM@4.04261,HUVEC@1.11008,K562@2.39646,MCF7@2.86625,NHEK@0.938504,NHLF@2.45103,SKNSHRA@5.47338, 0 0 0 0 ENSG00000220504.3 ENST00000448991.1 chr6:52804524-52810263 3 518 5217 intergenic 2.89 0 0,0,0 0 0,0,0 110.471042471042 3.57542649032011 5.287 132.166023166023 0.221583285413073 7.791 164.725868725869 3.62123825953613 6.734 0 0 chimp,cow,elephant,guinea_pig,horse,human,macaque,marmoset,mouse,orangutan,pig,platypus,rabbit,rat, processed_transcript processed_transcript A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0.0044565,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0.004355, 0 0 0 0 ENSG00000226305.1 ENST00000457637.1 chr6:53247135-53247532 2 354 41 intergenic 0 0 0,0,0 0 0,0,0 0 0 0 68.3502824858757 263 0 108.78813559322 289 0 0 0 cat,chimp,cow,dog,elephant,guinea_pig,horse,human,macaque,marmoset,mouse,opossum,orangutan,panda,pig,rabbit,rat, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0.037662,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000249379.1 ENST00000508884.1 chr6:53367983-53371717 3 544 3186 exonic -7.36 1 0,0,0 0 0,0,0 8.11764705882353 22.9908976773384 0 74.1323529411765 29.9761456371626 0 44.0183823529412 32.7507846829881 0 0 0 chimp,elephant,human,macaque,marmoset,orangutan,rabbit, antisense antisense A549@0.0230855,AG04450@0.008611,BJ@0,GM12878@0.129672,H1HESC@0,HELAS3@0.0097035,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0.0188987,NHLF@0.003567,SKNSHRA@0, 0 0 0 0 ENSG00000231683.2 ENST00000420819.2 chr6:53434079-53438063 2 389 3593 intronic -5.14 0 0,0,0 0 0,0,0 0 0 0 0 0 0 0 1.65794600612302 0 0 0 chimp,dog,human,macaque,orangutan,panda, processed_transcript processed_transcript A549@3.95915,AG04450@0.0370255,BJ@0,GM12878@0,H1HESC@0,HELAS3@0.2326,HEPG2@0.934457,HMEC@1.14403,HSMM@0,HUVEC@0,K562@0.00535,MCF7@0,NHEK@0.307552,NHLF@0,SKNSHRA@0.000722, 0 0 0 0 ENSG00000235899.1 ENST00000448327.1 chr6:53493178-53496192 3 563 2447 intergenic 0.10 0 1,1,1 0 0,0,0 0 4.6751123825092 0 0 2.72905598692276 2.7 0 6.05435226808337 2.72 0 0 chimp,cow,dog,horse,human,macaque,orangutan,pig,rabbit, antisense antisense A549@0.76939,AG04450@0.008322,BJ@0.0086995,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0.244105,HMEC@0.405122,HSMM@0,HUVEC@0,K562@0,MCF7@0.0180825,NHEK@0.368993,NHLF@0.020684,SKNSHRA@0, 0 0 0 0 ENSG00000227885.1 ENST00000453790.1 chr6:53605547-53611820 3 847 5422 intergenic -0.12 0 0,0,1 0 0,0,0 0 0 0 6.44155844155844 3.16285503504242 0 6.72727272727273 4.56215418664699 0 0 0 chimp,human,macaque,marmoset, lincRNA lincRNA A549@0.266396,AG04450@0.199689,BJ@0.0458665,GM12878@0.229215,H1HESC@0.503629,HELAS3@0.102293,HEPG2@0.264734,HMEC@0.369458,HSMM@0.009683,HUVEC@0.0480955,K562@0,MCF7@0.583321,NHEK@0.745591,NHLF@0.0113755,SKNSHRA@0.046913, 0 0 0 0 ENSG00000228614.1 ENST00000429053.1 chr6:53655673-53659072 3 480 2915 intergenic -3.48 0 0,0,0 0 0,0,0 0 0 38.144 10.09375 4.84596912521441 90.758 10.7666666666667 6.76878216123499 74.432 0 0 chimp,horse,human,macaque,orangutan, antisense antisense A549@0.074513,AG04450@0.0795655,BJ@0.041615,GM12878@0.240824,H1HESC@0.317249,HELAS3@0.114131,HEPG2@0.101626,HMEC@0.008477,HSMM@0.012606,HUVEC@0.005034,K562@0,MCF7@0.126867,NHEK@0.24774,NHLF@0.003995,SKNSHRA@0.0800075, 0 0 0 0 ENSG00000236996.1 ENST00000441845.1 chr6:53863688-53871950 4 639 7617 intronic -3.08 0 0,0,0 0 0,0,0 0 13.9235919653407 0 0 8.72088748851254 0 3.04225352112676 10.1618747538401 0 0 0 chimp,cow,elephant,horse,human,macaque,marmoset,orangutan,panda,rabbit, sense_intronic sense_intronic A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0.0502777,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000235050.1 ENST00000434196.1 chr6:53911717-53912392 2 542 131 intronic 0 0 0,0,0 0 0,0,0 0 0 0 0 0 0 0 0 0 0 0 cat,chimp,dog,elephant,horse,human,macaque,marmoset,orangutan,panda, antisense antisense A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0.0083805,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000228231.1 ENST00000421465.1 chr6:54230133-54231975 2 356 1484 intronic 1.44 0 0,0,0 0 0,0,0 0 0 0 0 0 0 0 0 0 0 0 chimp,dog,horse,human,macaque,orangutan,panda, antisense antisense A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000224984.1 ENST00000425089.1 chr6:54704916-54705653 2 584 151 intergenic -7.36 0 0,0,1 0 0,0,0 0 0 0 0 0 0 0 0 6.075 0 0 cat,chimp,dog,elephant,horse,human,macaque,marmoset,orangutan,panda,pig, antisense antisense A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0.017013,HELAS3@0.085624,HEPG2@0,HMEC@0.77315,HSMM@0.0070225,HUVEC@0,K562@0,MCF7@4.58008,NHEK@1.15111,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000227602.1 ENST00000415663.1 chr6:56196586-56196915 1 329 0 intronic 0 0 0,1,0 0 0,0,0 0 0 0 386.626139817629 0 0 543.209726443769 0 0 0 0 cat,chimp,cow,dog,elephant,guinea_pig,horse,human,macaque,marmoset,mouse,opossum,orangutan,panda,pig,platypus,rabbit,rat, sense_intronic sense_intronic A549@0.001086,AG04450@0,BJ@0,GM12878@0,H1HESC@0.0028905,HELAS3@0,HEPG2@0.0010215,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0.000734,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000231441.1 ENST00000426453.1 chr6:56708800-56728876 4 547 19523 intronic 9.84 0 0,1,0 0 0,0,0 0 36.9467294985402 84.354 4.94698354661792 35.3395482251703 129.329 8.38208409506398 37.2251190903037 151.764 0 0 chimp,dog,horse,human,macaque,marmoset,orangutan, antisense antisense A549@0.0448305,AG04450@0,BJ@0.022265,GM12878@0.0335225,H1HESC@0.0217285,HELAS3@0.02775,HEPG2@0.0353745,HMEC@0.014863,HSMM@0.145823,HUVEC@0,K562@0,MCF7@0.0626085,NHEK@0,NHLF@0.0459565,SKNSHRA@0.127763, 0 0 0 0 ENSG00000226803.1 ENST00000416069.1 chr6:56979709-57037194 4 869 56610 exonic 7.31 0 0,0,0 0 0,0,0 0 31.2762409468292 23.901 3.85040276179517 29.1730966260378 49.866 4.17261219792865 29.1665960077725 80.129 0 0 chimp,human,macaque,marmoset,orangutan, lincRNA processed_transcript A549@0.026402,AG04450@0.083183,BJ@0.100835,GM12878@0.0493125,H1HESC@0.0322595,HELAS3@0.09893,HEPG2@0.0839875,HMEC@0,HSMM@0.0250945,HUVEC@0.0298945,K562@0.026645,MCF7@0.048483,NHEK@0.004537,NHLF@0.0133605,SKNSHRA@0.0562745, 0 0 0 0 ENSG00000237564.1 ENST00000421261.1 chr6:57358736-57362565 2 343 3484 intronic -0.77 0 0,0,0 0 0,0,0 406.338192419825 42.0083237657865 0 347.985422740525 30.5086107921929 7.961 413.492711370262 37.2832950631458 9.608 0 0 cat,chimp,cow,dog,elephant,guinea_pig,horse,human,macaque,marmoset,mouse,opossum,orangutan,panda,platypus,rabbit,rat, sense_intronic sense_intronic A549@0,AG04450@0,BJ@0.070164,GM12878@0.252465,H1HESC@0,HELAS3@0,HEPG2@0.0736145,HMEC@0,HSMM@0,HUVEC@0,K562@0.049423,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0.065136, 0 0 0 0 ENSG00000231273.1 ENST00000456887.1 chr6:57690895-57691645 2 313 435 intergenic -5.27 0 0,0,0 0 0,0,0 0 23.3747126436782 0 38.5271565495208 17.8045977011494 32.623 33.4408945686901 18.4022988505747 35.249 0 0 cat,chimp,cow,dog,elephant,horse,human,macaque,marmoset,mouse,orangutan,panda,pig,rabbit,rat, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0.03266,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 193 2 124 2 ENSG00000215190.4 ENST00000418765.1 chr6:58272352-58287779 5 1633 13786 intergenic 8.74 0 0,1,1 1 0,0,0 0 0 0 19.7672994488671 0.143696503699405 0 30.0104102878138 0.744450892209488 0 0 0 chimp,cow,horse,human,macaque,orangutan, lincRNA processed_transcript A549@1.331,AG04450@3.76319,BJ@2.52041,GM12878@1.83247,H1HESC@0.405127,HELAS3@3.20945,HEPG2@2.69841,HMEC@0.614006,HSMM@5.47989,HUVEC@2.84271,K562@2.43321,MCF7@2.70625,NHEK@0.90505,NHLF@2.13442,SKNSHRA@2.58566, 0 0 0 0 ENSG00000215190.4 ENST00000450081.1 chr6:58272352-58287779 5 1588 13831 intergenic 8.74 0 0,1,1 1 0,0,0 0 0 0 20.3274559193955 0.143228978381896 0 30.8608312342569 0.74202877593811 0 0 0 chimp,cow,horse,human,macaque,orangutan, lincRNA processed_transcript A549@1.331,AG04450@3.76319,BJ@2.52041,GM12878@1.83247,H1HESC@0.405127,HELAS3@3.20945,HEPG2@2.69841,HMEC@0.614006,HSMM@5.47989,HUVEC@2.84271,K562@2.43321,MCF7@2.70625,NHEK@0.90505,NHLF@2.13442,SKNSHRA@2.58566, 0 0 0 0 ENSG00000215190.4 ENST00000399751.2 chr6:58272356-58287658 6 1615 13677 intergenic 8.74 1 1,1,1 1 0,0,0 0 0 0 19.9876160990712 0.144841705052278 0 30.3448916408669 0.750383856108796 0 0 0 chimp,cow,horse,human,macaque,orangutan, lincRNA processed_transcript A549@1.331,AG04450@3.76319,BJ@2.52041,GM12878@1.83247,H1HESC@0.405127,HELAS3@3.20945,HEPG2@2.69841,HMEC@0.614006,HSMM@5.47989,HUVEC@2.84271,K562@2.43321,MCF7@2.70625,NHEK@0.90505,NHLF@2.13442,SKNSHRA@2.58566, 0 0 0 0 ENSG00000215190.4 ENST00000418368.1 chr6:58272356-58287658 6 1660 13632 intergenic 8.74 1 1,1,1 1 0,0,0 0 0 0 19.4457831325301 0.145319835680751 0 29.5222891566265 0.752860915492958 0 0 0 chimp,cow,human,macaque,orangutan, lincRNA processed_transcript A549@1.331,AG04450@3.76319,BJ@2.52041,GM12878@1.83247,H1HESC@0.405127,HELAS3@3.20945,HEPG2@2.69841,HMEC@0.614006,HSMM@5.47989,HUVEC@2.84271,K562@2.43321,MCF7@2.70625,NHEK@0.90505,NHLF@2.13442,SKNSHRA@2.58566, 0 0 0 0 ENSG00000215190.4 ENST00000422882.1 chr6:58272361-58276677 2 2620 1694 intergenic 8.74 1 0,0,1 0 0,0,0 0 0 0 0 0 0 0 0 0 0 0 chimp,human,macaque,orangutan, lincRNA processed_transcript A549@1.331,AG04450@3.76319,BJ@2.52041,GM12878@1.83247,H1HESC@0.405127,HELAS3@3.20945,HEPG2@2.69841,HMEC@0.614006,HSMM@5.47989,HUVEC@2.84271,K562@2.43321,MCF7@2.70625,NHEK@0.90505,NHLF@2.13442,SKNSHRA@2.58566, 0 0 0 0 ENSG00000225096.1 ENST00000420759.1 chr6:58291908-58298496 3 298 6286 intergenic -7.18 1 0,0,1 0 0,0,0 0 0 0 0 17.6732421253579 0 0 134.238148265988 0 0 0 cat,chimp,cow,dog,elephant,horse,human,macaque,marmoset,orangutan,pig, lincRNA lincRNA A549@0.0091765,AG04450@0.0601685,BJ@0.016219,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0.0451255,HMEC@0,HSMM@0.0864545,HUVEC@0,K562@0.007714,MCF7@0.0133585,NHEK@0.004241,NHLF@0.025785,SKNSHRA@0.211888, 193 2 124 2 ENSG00000236345.1 ENST00000429530.1 chr6:64516729-64532535 2 1452 14352 intronic 0.34 0 0,0,1 0 0,0,0 0 4.95505852842809 64.344 0 7.1595596432553 88.718 2.5103305785124 7.84169453734671 125.73 0 0 chimp,human,macaque,orangutan, antisense antisense A549@0.0963495,AG04450@0.045499,BJ@0.018151,GM12878@0.0072465,H1HESC@0,HELAS3@0.152995,HEPG2@0.0564275,HMEC@0.061954,HSMM@2.42709,HUVEC@0.014876,K562@0.0073655,MCF7@0.008359,NHEK@0.136218,NHLF@0.030701,SKNSHRA@2.24543, 0 0 0 0 ENSG00000232120.1 ENST00000424274.1 chr6:65087688-65122672 4 521 34457 intronic -0.76 0 0,0,0 0 0,0,0 0 6.75296746669762 0 17.7255278310941 10.1713730156427 0 29.7063339731286 12.8935775023943 0 0 0 cat,chimp,cow,dog,elephant,guinea_pig,horse,human,macaque,marmoset,mouse,orangutan,panda,pig,rabbit,rat, antisense antisense A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0.0078325,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000243828.1 ENST00000433531.1 chr6:65438730-65443460 2 415 4313 intronic 13.37 1 0,0,0 0 0,0,0 0 0 0 0 0 0 277.655421686747 24.4869000695572 220.156 0 0 chimp,cow,human,marmoset,mouse,orangutan,rat, processed_transcript processed_transcript A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000243828.1 ENST00000421170.1 chr6:65440706-65443438 2 351 2379 intronic 9.11 0 0,0,0 0 0,0,0 0 0 0 0 0 0 319.008547008547 44.3934426229508 222.76 0 0 chimp,cow,dog,elephant,human,macaque,marmoset,opossum,orangutan,pig,rabbit, processed_transcript processed_transcript A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000230672.1 ENST00000450674.1 chr6:66191208-66191981 2 418 353 intronic -4.04 0 0,0,0 0 0,0,0 0 0 0 0 0 0 0 0 0 0 0 chimp,cow,dog,elephant,guinea_pig,horse,human,macaque,marmoset,orangutan,panda,pig, antisense antisense A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000223504.1 ENST00000449928.1 chr6:68765243-68770394 2 490 4659 intergenic -1.89 1 0,1,1 0 0,0,0 127.040816326531 1.3683193818416 0 139.359183673469 3.32474779995707 4.624 158.675510204082 5.29255204979609 35.152 0 0 chimp,cow,dog,elephant,guinea_pig,horse,human,macaque,marmoset,mouse,opossum,orangutan,panda,pig,rabbit,rat, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0.0095285,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@1.21053,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000226497.1 ENST00000445346.1 chr6:68936864-69039791 4 670 102251 intergenic 1.37 0 0,1,1 0 0,0,0 0 3.19939169299078 0 0 7.87013329942983 0 0 9.3404074287782 0 0 0 chimp,human,macaque,marmoset,orangutan, lincRNA lincRNA A549@0.005004,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0.0067325, 0 0 0 0 ENSG00000230910.1 ENST00000419979.1 chr6:69342555-69344216 2 532 1127 intergenic -2.34 1 0,1,1 0 0,0,0 107.142857142857 95.4968944099379 283.41 145.003759398496 127.561668145519 113.83 146.278195488722 120.360248447205 110.173 0 0 cat,chimp,cow,dog,elephant,guinea_pig,horse,human,macaque,marmoset,orangutan,panda,pig,rabbit, antisense antisense A549@0.004065,AG04450@0,BJ@0.0182845,GM12878@0,H1HESC@0.189028,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0.789928,MCF7@0.0383325,NHEK@0.00247233,NHLF@0,SKNSHRA@11.2994, 0 0 0 0 ENSG00000253809.1 ENST00000522264.1 chr6:70932461-70951859 2 252 19144 exonic -11.97 1 0,0,1 0 0,0,0 44.1309523809524 8.68005641454242 0 113.849206349206 22.8174362724613 0 122.555555555556 25.6644379440034 0 0 0 cat,chimp,cow,dog,elephant,horse,human,macaque,marmoset,mouse,orangutan,panda,pig,rabbit,rat, antisense antisense A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000237643.1 ENST00000418403.1 chr6:71104590-71109120 3 394 4132 intergenic -2.16 0 1,1,1 0 0,0,0 0 33.8862536302033 0 14.256345177665 50.7792836398838 0 14.1142131979695 52.1127783155857 0 0 0 chimp,human,orangutan, lincRNA lincRNA A549@0.0293675,AG04450@0.044742,BJ@0.0978165,GM12878@0.036697,H1HESC@0.041803,HELAS3@0.65856,HEPG2@0.167284,HMEC@0.05157,HSMM@0,HUVEC@0.516796,K562@122.08,MCF7@0,NHEK@0.193269,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000224349.2 ENST00000448363.2 chr6:71122531-71123653 2 347 773 intronic 0 1 1,1,1 0 0,0,0 0 57.2833117723157 7.524 42.0115273775216 148.785252263907 0 32.9394812680115 127.653298835705 1.645 0 0 cat,chimp,elephant,human,macaque,marmoset,orangutan,panda,rabbit, antisense antisense A549@0.117613,AG04450@0.143656,BJ@0.055635,GM12878@0.178905,H1HESC@0.327688,HELAS3@0.210731,HEPG2@0.319142,HMEC@0.011732,HSMM@0,HUVEC@0.0700485,K562@0.673296,MCF7@0.0117825,NHEK@0.0858847,NHLF@0.0110575,SKNSHRA@0.121519, 0 0 0 0 ENSG00000232295.1 ENST00000412751.1 chr6:71961061-72020279 4 461 58751 encompassing 0.83 0 0,0,0 0 0,0,0 0 14.0552331024153 0 11.3752711496746 23.3942911610015 0 5.9002169197397 25.3188711681503 0 0 0 chimp,dog,elephant,guinea_pig,human,macaque,marmoset,orangutan, antisense antisense A549@0.0557445,AG04450@0.0934725,BJ@0.067206,GM12878@0,H1HESC@0,HELAS3@0.234124,HEPG2@0.041492,HMEC@0,HSMM@0.0038895,HUVEC@0.192505,K562@0,MCF7@0,NHEK@0.0592463,NHLF@0,SKNSHRA@0.0152015, 0 0 0 0 ENSG00000232295.1 ENST00000423255.1 chr6:71961067-72020043 3 404 58568 encompassing -1.40 0 0,1,0 0 0,0,0 0 14.0991497063243 0 8.1980198019802 23.4673883349269 1.656 6.73267326732673 25.3979818330829 0 0 0 chimp,human,macaque,marmoset,orangutan, antisense antisense A549@0.0557445,AG04450@0.0934725,BJ@0.067206,GM12878@0,H1HESC@0,HELAS3@0.234124,HEPG2@0.041492,HMEC@0,HSMM@0.0038895,HUVEC@0.192505,K562@0,MCF7@0,NHEK@0.0592463,NHLF@0,SKNSHRA@0.0152015, 0 0 0 0 ENSG00000232295.1 ENST00000432050.1 chr6:72004876-72020298 5 413 15001 intronic -7.22 1 0,0,0 0 0,0,0 0 27.9041397240184 0 12.6973365617433 49.5936937537498 0 6.58595641646489 55.0452636490901 0 0 0 chimp,elephant,human,macaque,marmoset,orangutan,panda, antisense antisense A549@0.0557445,AG04450@0.0934725,BJ@0.067206,GM12878@0,H1HESC@0,HELAS3@0.234124,HEPG2@0.041492,HMEC@0,HSMM@0.0038895,HUVEC@0.192505,K562@0,MCF7@0,NHEK@0.0592463,NHLF@0,SKNSHRA@0.0152015, 0 0 0 0 ENSG00000232295.1 ENST00000450998.1 chr6:72012545-72037787 5 520 24714 intergenic -2.58 1 0,0,1 0 0,0,0 0 14.4044671036659 0 10.0846153846154 18.4764910577001 3.107 5.23076923076923 20.9628145990127 3.263 0 0 chimp,human,macaque,marmoset,orangutan, antisense antisense A549@0.0557445,AG04450@0.0934725,BJ@0.067206,GM12878@0,H1HESC@0,HELAS3@0.234124,HEPG2@0.041492,HMEC@0,HSMM@0.0038895,HUVEC@0.192505,K562@0,MCF7@0,NHEK@0.0592463,NHLF@0,SKNSHRA@0.0152015, 0 0 0 0 ENSG00000232295.1 ENST00000434683.1 chr6:72017644-72037787 4 525 19612 intergenic -1.24 1 0,0,0 0 0,0,0 0 9.47583112380175 0 9.98857142857143 14.3057821741791 3.107 5.18095238095238 16.5054048541709 3.263 0 0 chimp,dog,elephant,horse,human,macaque,marmoset,orangutan,panda,pig,rabbit, antisense antisense A549@0.0557445,AG04450@0.0934725,BJ@0.067206,GM12878@0,H1HESC@0,HELAS3@0.234124,HEPG2@0.041492,HMEC@0,HSMM@0.0038895,HUVEC@0.192505,K562@0,MCF7@0,NHEK@0.0592463,NHLF@0,SKNSHRA@0.0152015, 0 0 0 0 ENSG00000230597.1 ENST00000456795.1 chr6:72038645-72039509 2 350 512 intergenic -1.36 0 0,1,1 0 0,0,0 0 0 0 0 0 3.107 0 0 3.263 0 0 chimp,human,macaque,orangutan, lincRNA lincRNA A549@0.012333,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000233237.1 ENST00000413945.1 chr6:72054047-72129806 4 658 75095 intergenic -2.08 0 0,0,0 0 0,0,0 0 10.6059125108196 71.155 9.21732522796353 23.1373460283641 77.189 8.62917933130699 26.9918902723217 82.69 0 0 chimp,dog,elephant,horse,human,macaque,marmoset,orangutan,panda,rabbit, lincRNA processed_transcript A549@2.45021,AG04450@1.75088,BJ@1.39624,GM12878@0.006673,H1HESC@0.554071,HELAS3@7.46739,HEPG2@2.89052,HMEC@0.726381,HSMM@1.03153,HUVEC@3.48937,K562@0,MCF7@0.1199,NHEK@2.69436,NHLF@0.534327,SKNSHRA@0.807824, 0 0 0 0 ENSG00000233237.1 ENST00000436803.1 chr6:72054289-72129969 5 662 75010 intergenic -1.27 0 0,1,0 0 0,0,0 0 10.617930942541 71.155 44.7809667673716 23.1635648580189 53.609 43.9078549848943 27.0224770030663 59.301 0 0 chimp,dog,human,macaque,marmoset,orangutan, lincRNA processed_transcript A549@2.45021,AG04450@1.75088,BJ@1.39624,GM12878@0.006673,H1HESC@0.554071,HELAS3@7.46739,HEPG2@2.89052,HMEC@0.726381,HSMM@1.03153,HUVEC@3.48937,K562@0,MCF7@0.1199,NHEK@2.69436,NHLF@0.534327,SKNSHRA@0.807824, 0 0 0 0 ENSG00000233237.1 ENST00000426635.1 chr6:72124149-72130472 4 2953 3364 intergenic -1.95 0 0,1,0 1 0,0,0 62.1855739925499 30.9631391200951 6.9 76.2831019302404 48.5514268727705 31.883 80.8103623433796 47.4589774078478 30.51 0 0 chimp,dog,horse,human,macaque,marmoset,orangutan,panda, lincRNA processed_transcript A549@2.45021,AG04450@1.75088,BJ@1.39624,GM12878@0.006673,H1HESC@0.554071,HELAS3@7.46739,HEPG2@2.89052,HMEC@0.726381,HSMM@1.03153,HUVEC@3.48937,K562@0,MCF7@0.1199,NHEK@2.69436,NHLF@0.534327,SKNSHRA@0.807824, 0 0 0 0 ENSG00000233237.1 ENST00000421704.1 chr6:72126087-72129970 3 448 3431 intergenic -2.08 0 0,1,0 0 0,0,0 0 30.3584960652871 71.155 66.171875 47.6033226464588 53.609 64.8816964285714 46.5322063538327 59.301 0 0 chimp,dog,human,macaque,marmoset,orangutan, lincRNA processed_transcript A549@2.45021,AG04450@1.75088,BJ@1.39624,GM12878@0.006673,H1HESC@0.554071,HELAS3@7.46739,HEPG2@2.89052,HMEC@0.726381,HSMM@1.03153,HUVEC@3.48937,K562@0,MCF7@0.1199,NHEK@2.69436,NHLF@0.534327,SKNSHRA@0.807824, 0 0 0 0 ENSG00000233237.1 ENST00000441570.1 chr6:72126180-72129970 4 471 3313 intergenic -2.08 0 0,1,0 0 0,0,0 0 31.4397826743133 71.155 62.9405520169851 49.2988228191971 53.609 61.7133757961783 48.1895562933897 59.301 0 0 chimp,dog,human,macaque,marmoset,orangutan, lincRNA processed_transcript A549@2.45021,AG04450@1.75088,BJ@1.39624,GM12878@0.006673,H1HESC@0.554071,HELAS3@7.46739,HEPG2@2.89052,HMEC@0.726381,HSMM@1.03153,HUVEC@3.48937,K562@0,MCF7@0.1199,NHEK@2.69436,NHLF@0.534327,SKNSHRA@0.807824, 0 0 0 0 ENSG00000223765.1 ENST00000431997.1 chr6:72160537-72168577 4 450 7584 intergenic 3.49 0 0,0,1 0 0,0,0 0 5.2525052742616 0 0 10.7220464135021 0 0 10.868670886076 0 0 0 chimp,human,macaque,marmoset,orangutan,pig, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0.010326,H1HESC@0.014589,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000233844.1 ENST00000445310.1 chr6:73340223-73388282 4 559 47494 intronic -0.87 0 0,0,1 0 0,0,0 0 10.7530214342864 68.708 0 12.5974859982314 85.172 0 14.2678864698699 80.527 0 0 chimp,human,macaque,marmoset,orangutan, sense_intronic sense_intronic A549@0,AG04450@0,BJ@0.011343,GM12878@0.118648,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0.021617,HSMM@0,HUVEC@0,K562@0.0341495,MCF7@0,NHEK@0.0316467,NHLF@0,SKNSHRA@0.002458, 0 0 0 0 ENSG00000232868.1 ENST00000429215.1 chr6:73437950-73438464 2 386 126 intronic -8.92 0 0,1,0 0 0,0,0 0 0 0 0 0 0 0 0 0 0 0 cat,human,macaque,marmoset,orangutan,panda, antisense antisense A549@0,AG04450@0,BJ@0,GM12878@0.0075375,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000229154.1 ENST00000429832.1 chr6:73844526-73853237 5 1096 7607 intronic 1.57 0 0,0,0 0 0,0,0 84.2554744525548 23.3586170632312 49.571 2.39872262773723 7.05626396739845 68.213 3.54744525547445 7.81911397397134 86.39 0 0 cat,chimp,dog,horse,human,macaque,marmoset,orangutan,pig, antisense antisense A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000229852.2 ENST00000442007.1 chr6:73972938-73986240 3 1080 12218 intronic 2.32 0 1,1,1 1 0,0,0 0 0 31.08 0 0.608937633000491 6.375 0 0.650679325585202 9.805 0 0 chimp,human,macaque,marmoset,orangutan, processed_transcript processed_transcript A549@0.476818,AG04450@0.602139,BJ@0.710679,GM12878@1.13749,H1HESC@1.24948,HELAS3@0.936747,HEPG2@0.23784,HMEC@1.04478,HSMM@0.593073,HUVEC@0.312903,K562@0.459098,MCF7@0.399555,NHEK@1.86899,NHLF@0.788574,SKNSHRA@1.09989, 0 0 0 0 ENSG00000229852.2 ENST00000441363.1 chr6:73973082-74011124 2 2401 35639 intronic 4.91 1 1,1,1 1 0,0,0 0 5.9493532366228 31.08 0 5.5023990572126 6.375 0 37.8235079547687 9.805 0 0 chimp,human,macaque,orangutan, processed_transcript processed_transcript A549@0.476818,AG04450@0.602139,BJ@0.710679,GM12878@1.13749,H1HESC@1.24948,HELAS3@0.936747,HEPG2@0.23784,HMEC@1.04478,HSMM@0.593073,HUVEC@0.312903,K562@0.459098,MCF7@0.399555,NHEK@1.86899,NHLF@0.788574,SKNSHRA@1.09989, 0 0 0 0 ENSG00000229852.2 ENST00000421315.1 chr6:73977774-74001063 3 3359 19926 intronic 7.48 0 0,1,1 0 0,0,0 0 0 0 0 0.603081401184382 0 157.614468591843 5.51666164809796 0 0 0 chimp,human,orangutan, processed_transcript processed_transcript A549@0.476818,AG04450@0.602139,BJ@0.710679,GM12878@1.13749,H1HESC@1.24948,HELAS3@0.936747,HEPG2@0.23784,HMEC@1.04478,HSMM@0.593073,HUVEC@0.312903,K562@0.459098,MCF7@0.399555,NHEK@1.86899,NHLF@0.788574,SKNSHRA@1.09989, 0 0 0 0 ENSG00000231332.1 ENST00000445350.1 chr6:74079427-74080628 2 459 740 exonic 0 0 0,0,0 0 0,0,0 0 0 10.032 0 0 14.13 0 0 14.454 0 0 chimp,human,macaque,marmoset,orangutan, antisense antisense A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000223821.1 ENST00000423099.1 chr6:74201748-74202465 2 368 347 exonic -6.64 0 0,1,0 0 0,0,0 80.3125 15.5533141210375 0 73.1059782608696 19.0432276657061 0 80.1059782608696 19.4956772334294 0 0 0 cat,chimp,dog,human,macaque,marmoset,mouse,opossum,orangutan,pig,rabbit,rat, antisense antisense A549@0,AG04450@0.020731,BJ@0.006654,GM12878@0.131901,H1HESC@0,HELAS3@0.0112815,HEPG2@0,HMEC@0,HSMM@0.104606,HUVEC@0,K562@0.013276,MCF7@0,NHEK@0.003568,NHLF@0.104592,SKNSHRA@0.0920655, 0 0 0 0 ENSG00000229862.1 ENST00000431108.1 chr6:74233341-74280256 3 553 46358 exonic 2.38 0 0,1,0 0 0,0,0 0 2.34423400491824 0 1.29656419529837 6.16765175374261 0 9.66726943942134 9.11467276413995 0 0 0 chimp,human,macaque,marmoset,orangutan, antisense antisense A549@0,AG04450@0.0053245,BJ@0.004428,GM12878@0.0072515,H1HESC@0,HELAS3@0.0470835,HEPG2@0.040003,HMEC@0,HSMM@0.0037005,HUVEC@0.0053525,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000229862.1 ENST00000429386.1 chr6:74233564-74280319 4 582 46167 intergenic 0 0 0,1,0 0 0,0,0 0 2.3539324625815 0 3.94329896907217 2.93898239001884 0.956 12.0309278350515 5.84261485476639 0.972 0 0 cat,chimp,cow,dog,horse,human,macaque,marmoset,orangutan,rabbit, antisense antisense A549@0,AG04450@0.0053245,BJ@0.004428,GM12878@0.0072515,H1HESC@0,HELAS3@0.0470835,HEPG2@0.040003,HMEC@0,HSMM@0.0037005,HUVEC@0.0053525,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000231652.1 ENST00000428865.1 chr6:74405258-74405854 2 339 255 exonic 4.79 0 0,1,1 0 0,0,0 10.23598820059 130.635294117647 0 59.2241887905605 156.282352941176 31.495 42.9262536873156 153.105882352941 27.474 0 0 cat,chimp,cow,dog,elephant,human,macaque,marmoset,mouse,orangutan,panda,rat, lincRNA processed_transcript A549@0.0759085,AG04450@0.0928605,BJ@0.0592895,GM12878@0,H1HESC@0.0400205,HELAS3@0.054394,HEPG2@0.0350075,HMEC@0.072046,HSMM@0.0528285,HUVEC@0.199371,K562@0,MCF7@0.017955,NHEK@0.0225807,NHLF@0.0169755,SKNSHRA@0.095988, 0 0 0 0 ENSG00000223786.1 ENST00000435946.1 chr6:74779167-75400443 4 665 620605 intergenic -0.00 0 0,0,1 0 0,0,0 0 2.56071897583809 0 1.79699248120301 6.60369639303584 11.036 6.66917293233083 10.5466681705755 12.377 0 0 cat,chimp,cow,dog,elephant,horse,human,macaque,marmoset,orangutan,pig,rabbit, processed_transcript processed_transcript A549@0.0032445,AG04450@0.0286425,BJ@0.0072345,GM12878@0.143404,H1HESC@0,HELAS3@0.0049135,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0.037769,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000238052.1 ENST00000436672.1 chr6:75303895-75304929 2 585 447 intergenic -1.26 0 0,0,1 0 0,0,0 0 0 0 0 0 0 0 0 0 0 0 chimp,dog,horse,human,macaque,orangutan,panda, processed_transcript processed_transcript A549@0,AG04450@0.005493,BJ@0,GM12878@0,H1HESC@0,HELAS3@0.0076985,HEPG2@0.0072595,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0.008922,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000238052.1 ENST00000432484.1 chr6:75304299-75443995 3 296 139396 intergenic -1.32 0 0,0,0 0 0,0,0 0 4.44786794456082 0 0 8.87498206548251 91.773 0 9.80043186318114 93.651 0 0 cat,chimp,cow,dog,elephant,guinea_pig,horse,human,macaque,marmoset,mouse,orangutan,panda,pig,rabbit,rat, processed_transcript processed_transcript A549@0,AG04450@0.005493,BJ@0,GM12878@0,H1HESC@0,HELAS3@0.0076985,HEPG2@0.0072595,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0.008922,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000224583.1 ENST00000421318.1 chr6:75352100-75361718 2 439 9177 intergenic 0 0 0,0,1 0 0,0,0 104.316628701595 4.65021248774109 0 176.751708428246 18.2447422905089 1.434 179.248291571754 15.8743598125749 1.554 0 0 cat,chimp,cow,dog,elephant,guinea_pig,horse,human,macaque,marmoset,mouse,orangutan,panda,pig,rabbit,rat, lincRNA lincRNA A549@0,AG04450@0.0038385,BJ@0.019983,GM12878@0.018136,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0.0120935,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000225793.1 ENST00000438676.1 chr6:75994730-76006283 3 442 11107 intronic 0 0 0,1,0 1 0,0,0 0 17.1733141262267 109.421 0 20.9882056360854 156.877 0 21.9260826505807 168.677 0 0 chimp,cow,human,marmoset,orangutan, lincRNA processed_transcript A549@0.749895,AG04450@0.331794,BJ@0.298524,GM12878@2.48472,H1HESC@0.294297,HELAS3@0.876814,HEPG2@0.65005,HMEC@0.174827,HSMM@0.364012,HUVEC@0.903142,K562@1.51874,MCF7@0.186567,NHEK@0.385949,NHLF@0.589943,SKNSHRA@0.680238, 0 0 0 0 ENSG00000237174.1 ENST00000440220.1 chr6:76067008-76072740 3 444 5284 exonic 0.64 0 0,0,0 0 0,0,0 63.3513513513514 0.332702498107494 0 168.835585585586 7.21990915972748 0 164.272522522523 7.89439818319455 0 0 0 cat,chimp,cow,dog,elephant,horse,human,macaque,marmoset,orangutan,panda,pig,rabbit, antisense antisense A549@0.028266,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000237174.1 ENST00000415457.1 chr6:76070528-76071727 2 263 934 intronic -0.84 0 0,0,0 0 0,0,0 0 0 0 0 6.14132762312634 1.912 0 6.65524625267666 2.008 0 0 cat,chimp,cow,dog,elephant,human,macaque,marmoset,orangutan,rabbit, antisense antisense A549@0.028266,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000237174.1 ENST00000419709.1 chr6:76070565-76096096 5 501 25022 intronic 2.46 0 0,0,0 0 0,0,0 93.0119760479042 17.1077851490688 0 95.8083832335329 29.3616817200863 1.912 104.922155688623 29.4923267524578 2.008 0 0 chimp,cow,elephant,guinea_pig,human,macaque,marmoset,mouse,orangutan,rat, antisense antisense A549@0.028266,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000238156.1 ENST00000455530.1 chr6:76164660-76168616 4 457 3493 intronic -2.55 0 0,1,1 0 0,0,0 12.3873085339168 12.0120240480962 13.888 120.503282275711 47.4248496993988 8.41 124.45295404814 46.6049241339823 9.947 0 0 chimp,dog,horse,human,macaque,marmoset,orangutan,panda,pig,rabbit, lincRNA lincRNA A549@0.0234665,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0.0098895,HUVEC@0.0258225,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0.0564005, 0 0 0 0 ENSG00000236635.1 ENST00000455554.1 chr6:77232168-77303340 3 566 70602 intergenic -18.90 0 0,0,1 0 0,0,0 0 0.721041896830118 0 0 2.92290586668933 0 0 3.71104218010821 0 0 0 cat,chimp,cow,dog,elephant,guinea_pig,horse,human,macaque,marmoset,orangutan,rabbit, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@2.06675,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000214481.3 ENST00000442882.1 chr6:78400542-78470871 2 102 70225 intergenic 0 0 0,0,0 0 0,0,0 174.705882352941 0 77.76 196.039215686275 1.04068351726593 66.631 194.607843137255 1.32790316838733 63.146 0 0 cat,chimp,cow,dog,elephant,guinea_pig,horse,human,macaque,marmoset,mouse,opossum,orangutan,panda,pig,rat, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000230309.1 ENST00000449463.1 chr6:79314184-79315753 2 385 1182 intergenic -3.44 0 0,1,0 0 0,0,0 0 0 0 0 2.51776649746193 0 0 2.62944162436548 0 0 0 chimp,cow,dog,horse,human,macaque,marmoset,orangutan,panda, lincRNA lincRNA A549@0,AG04450@0.0057915,BJ@0.0314825,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0.031741,HSMM@0.005317,HUVEC@0.660931,K562@0,MCF7@0,NHEK@0.006823,NHLF@0.064984,SKNSHRA@0.046942, 0 0 0 0 ENSG00000229495.1 ENST00000430931.1 chr6:79519432-79523020 2 2630 956 intergenic 2.57 0 0,0,0 0 0,0,0 0 23.5428870292887 0 0.81787072243346 76.7845188284519 1.673 0.831558935361217 80.2834728033473 2.331 0 0 chimp,elephant,human,macaque,marmoset,orangutan, lincRNA lincRNA A549@0.0025625,AG04450@0,BJ@0.0027185,GM12878@0.035648,H1HESC@0.0045165,HELAS3@0.011532,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0.0195155,K562@0,MCF7@0,NHEK@0.02048,NHLF@0,SKNSHRA@0.0634665, 0 0 0 0 ENSG00000229655.1 ENST00000435151.1 chr6:79980095-79980669 2 258 314 intergenic 0 0 0,0,0 0 0,0,0 0 0 48.992 0 0 62.379 0 0 63.154 0 0 cat,chimp,dog,human,macaque,marmoset,orangutan,panda, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0.0095175,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0.011446,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000231533.1 ENST00000429444.1 chr6:80130014-80131022 3 471 533 intergenic -5.01 0 0,1,0 0 0,0,0 0 0 0 0 0 0 37.7834394904459 74.2457786116323 0 0 0 chimp,elephant,horse,human,macaque,orangutan, lincRNA lincRNA A549@0.079818,AG04450@0,BJ@0,GM12878@0.131219,H1HESC@0.111228,HELAS3@0.047997,HEPG2@0.0487285,HMEC@0,HSMM@0.0843505,HUVEC@0.168693,K562@0,MCF7@0.326981,NHEK@0.00557067,NHLF@0,SKNSHRA@0.0670785, 0 0 0 0 ENSG00000235357.1 ENST00000438797.1 chr6:80513300-80516942 3 478 3160 intergenic 2.71 0 0,0,0 0 0,0,1 0 0 0 0 0 0 0 0 0 0 0 chimp,cow,dog,horse,human,macaque,marmoset,orangutan,panda,rabbit, lincRNA lincRNA A549@0,AG04450@0,BJ@0.0051185,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0.034051,HSMM@0,HUVEC@0,K562@0,MCF7@0.0042745,NHEK@0.0109603,NHLF@0,SKNSHRA@0.048274, 0 0 0 0 ENSG00000233835.1 ENST00000436418.1 chr6:80581590-80584327 2 323 2412 intergenic -4.40 0 0,0,0 0 0,0,0 0 3.73963515754561 0 21.3157894736842 15.773631840796 4.997 22.4551083591331 11.8665008291874 5.282 0 0 cat,chimp,dog,horse,human,macaque,marmoset,orangutan,panda,rabbit, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000233967.1 ENST00000452402.1 chr6:81153061-81175644 4 678 21899 intergenic 4.44 0 0,0,1 0 0,0,0 0 6.04726243207452 0 5.64601769911504 17.4829444266862 0 6.01769911504425 18.5893419790858 0 0 0 chimp,cow,guinea_pig,horse,human,macaque,marmoset,orangutan,pig,rabbit, lincRNA lincRNA A549@0.088394,AG04450@0.201977,BJ@0.100843,GM12878@0.236399,H1HESC@0.324548,HELAS3@0.113155,HEPG2@0.248614,HMEC@0.034888,HSMM@0.0655105,HUVEC@0.0658825,K562@0.079367,MCF7@0.131712,NHEK@0.0757067,NHLF@0.013731,SKNSHRA@0.511968, 0 0 0 0 ENSG00000233967.1 ENST00000443221.1 chr6:81153173-81172924 4 754 18991 intergenic 2.54 0 0,1,1 0 0,0,0 9.70159151193634 6.58806803222579 0 63.4840848806366 16.1760307514086 0 61.8899204244032 17.444526354589 0 0 0 cat,chimp,cow,dog,elephant,horse,human,macaque,marmoset,orangutan,panda, lincRNA lincRNA A549@0.088394,AG04450@0.201977,BJ@0.100843,GM12878@0.236399,H1HESC@0.324548,HELAS3@0.113155,HEPG2@0.248614,HMEC@0.034888,HSMM@0.0655105,HUVEC@0.0658825,K562@0.079367,MCF7@0.131712,NHEK@0.0757067,NHLF@0.013731,SKNSHRA@0.511968, 0 0 0 0 ENSG00000233967.1 ENST00000427048.1 chr6:81153173-81175572 5 727 21664 intergenic 2.54 0 0,1,0 0 0,0,0 0 6.11286004431315 0 5.26547455295736 17.6725904726736 0 5.6121045392022 18.7909896602659 0 0 0 cat,chimp,cow,dog,elephant,horse,human,macaque,marmoset,orangutan,panda, lincRNA lincRNA A549@0.088394,AG04450@0.201977,BJ@0.100843,GM12878@0.236399,H1HESC@0.324548,HELAS3@0.113155,HEPG2@0.248614,HMEC@0.034888,HSMM@0.0655105,HUVEC@0.0658825,K562@0.079367,MCF7@0.131712,NHEK@0.0757067,NHLF@0.013731,SKNSHRA@0.511968, 0 0 0 0 ENSG00000226089.1 ENST00000435858.1 chr6:82236819-82244630 2 782 7027 intronic -3.54 0 0,0,0 0 0,0,0 0 3.0704425786253 0 0 16.0799772306817 0 0 18.0347232104739 0 0 0 cat,chimp,cow,dog,horse,human,macaque,marmoset,orangutan,panda,rabbit, sense_intronic sense_intronic A549@0,AG04450@0.0219215,BJ@0,GM12878@0.319322,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0.0081515,SKNSHRA@0.0332465, 0 0 0 0 ENSG00000232031.1 ENST00000457116.1 chr6:82434439-82446070 4 467 11158 intronic 1.83 0 0,0,1 0 0,0,0 0 0 22.081 0 3.3163649399534 106.382 0 3.78858218318695 113.16 0 0 chimp,horse,human,macaque,orangutan, sense_intronic sense_intronic A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000224995.1 ENST00000441949.1 chr6:82523003-82523874 2 518 351 intergenic -3.27 0 0,0,0 0 0,0,0 0 0 0 0 0 0 0 0 0 0 0 cat,chimp,dog,elephant,guinea_pig,horse,human,macaque,marmoset,orangutan,panda,pig,rabbit, lincRNA lincRNA A549@0,AG04450@0.012402,BJ@0.061267,GM12878@0.0372985,H1HESC@0.10145,HELAS3@0.385041,HEPG2@0.418487,HMEC@0,HSMM@0.040423,HUVEC@0,K562@0.0566785,MCF7@0.054917,NHEK@0.00507767,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000226453.1 ENST00000418567.1 chr6:82554902-82643197 3 819 87472 intergenic 3.23 0 0,0,0 0 0,0,0 0 9.23811048106823 0 0 19.001108926285 22.708 0 20.1045248765319 30.162 0 0 cat,chimp,dog,elephant,guinea_pig,horse,human,macaque,marmoset,orangutan,panda,rabbit, lincRNA lincRNA A549@0.017283,AG04450@0.132245,BJ@0.221098,GM12878@0.669048,H1HESC@0.677052,HELAS3@4.20007,HEPG2@12.7554,HMEC@0.034869,HSMM@0.192609,HUVEC@0.0248265,K562@1.21532,MCF7@1.48889,NHEK@0.545318,NHLF@0.077805,SKNSHRA@0.185373, 0 0 0 0 ENSG00000227215.1 ENST00000451856.1 chr6:83642320-83648396 2 478 5596 intronic 2.48 0 0,0,0 0 0,0,0 0 6.21336669049321 0 0 8.16297355253753 1.984 0 11.4585418155826 2.008 0 0 cat,chimp,dog,horse,human,macaque,marmoset,mouse,orangutan,panda,rabbit, antisense antisense A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000237874.1 ENST00000443471.1 chr6:84437774-84446244 2 349 8119 intergenic -19.06 0 0,0,0 0 0,0,0 0 1.50129326271708 0 0 3.03768937061214 0 8.35530085959885 4.77558812661658 0 0 0 cat,chimp,cow,dog,elephant,horse,human,macaque,orangutan,panda,pig,rabbit, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000228679.1 ENST00000420766.1 chr6:84693447-84717042 4 831 22758 intergenic -1.35 1 0,1,0 0 0,0,0 0 0.440812022146059 0 2.01323706377858 4.03163722646981 0 2.04693140794224 4.43637402232182 0 0 0 cat,chimp,cow,dog,elephant,human,macaque,marmoset,orangutan,rat, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0.020647,H1HESC@0.010456,HELAS3@0,HEPG2@0.005103,HMEC@0,HSMM@0,HUVEC@0,K562@0.0086635,MCF7@0.012039,NHEK@0.00152867,NHLF@0,SKNSHRA@0.0054345, 0 0 0 0 ENSG00000230852.1 ENST00000444796.1 chr6:84732774-84734272 2 338 1158 intergenic -0.61 0 0,0,0 0 0,0,0 0 0 0 0 0 0 0 0 0 0 0 chimp,human,macaque,marmoset,orangutan, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0.013788,H1HESC@0.052444,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0.006781,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000231776.1 ENST00000454981.1 chr6:85130746-85180622 4 500 49370 intergenic -11.20 0 0,0,1 0 0,0,0 0 36.3148673283371 0 0 48.6068665181284 1.434 0 65.7775977314158 1.554 0 0 cat,chimp,cow,dog,horse,human,macaque,marmoset,orangutan,rabbit, processed_transcript processed_transcript A549@0,AG04450@0.0054535,BJ@0,GM12878@0.189649,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0.079911,HUVEC@0.142964,K562@0,MCF7@0.0298405,NHEK@0,NHLF@0,SKNSHRA@0.00553, 0 0 0 0 ENSG00000231776.1 ENST00000454172.1 chr6:85130749-85265870 3 408 134709 intergenic -2.20 0 0,0,1 0 0,0,0 0 24.6830724005078 0 0 37.0601667297657 6.048 0 43.3378467659919 7.681 0 0 cat,chimp,cow,dog,elephant,horse,human,macaque,marmoset,orangutan,pig,rabbit, processed_transcript processed_transcript A549@0,AG04450@0.0054535,BJ@0,GM12878@0.189649,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0.079911,HUVEC@0.142964,K562@0,MCF7@0.0298405,NHEK@0,NHLF@0,SKNSHRA@0.00553, 0 0 0 0 ENSG00000231776.1 ENST00000428896.1 chr6:85130766-85184647 4 473 53402 intergenic 0 1 0,0,1 0 0,0,0 0 33.5729935208419 0 0 44.9637654020449 0 0 61.0132204786337 0 0 0 cat,chimp,dog,elephant,horse,human,macaque,marmoset,orangutan,rabbit, processed_transcript processed_transcript A549@0,AG04450@0.0054535,BJ@0,GM12878@0.189649,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0.079911,HUVEC@0.142964,K562@0,MCF7@0.0298405,NHEK@0,NHLF@0,SKNSHRA@0.00553, 0 0 0 0 ENSG00000228290.1 ENST00000423086.1 chr6:85399223-85419252 3 374 19651 intronic -2.42 0 0,1,0 0 0,0,0 156.470588235294 7.87649483486845 79.818 20.3288770053476 27.8222991196377 56.158 34.9411764705882 28.9064169762353 46.842 0 0 chimp,dog,elephant,guinea_pig,horse,human,macaque,marmoset,mouse,orangutan,panda,pig,rabbit,rat, antisense antisense A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000228290.1 ENST00000441863.1 chr6:85404705-85419245 2 380 14158 intronic -7.38 0 0,0,0 0 0,0,0 149.947368421053 10.9324057070208 0 20.0078947368421 38.4906766492442 1.785 34.3894736842105 39.9717474219522 2.12 0 0 chimp,dog,elephant,guinea_pig,horse,human,macaque,marmoset,mouse,orangutan,panda,pig,rabbit,rat, antisense antisense A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000234155.1 ENST00000455071.1 chr6:86096937-86099904 2 2511 454 intergenic 0.81 0 0,1,1 0 0,0,0 3.90242931103146 0 0 6.26802070888092 0 2.976 7.76144962166468 0 5.035 0 0 chimp,human,macaque,marmoset,orangutan, lincRNA lincRNA A549@0.985878,AG04450@0.13373,BJ@0.0922255,GM12878@0.0189535,H1HESC@0.013897,HELAS3@0.192151,HEPG2@0.668419,HMEC@0.272106,HSMM@0.373964,HUVEC@0.211828,K562@0,MCF7@0.007237,NHEK@0.872501,NHLF@0.466357,SKNSHRA@0.231875, 0 0 0 0 ENSG00000223998.1 ENST00000429706.1 chr6:86270033-86270928 2 594 299 intronic -7.17 0 0,0,1 0 0,0,0 0 0 0 15.8383838383838 0 2.976 18.2070707070707 0 3.012 0 0 chimp,human,macaque,marmoset,orangutan,panda, sense_intronic sense_intronic A549@0.36634,AG04450@0.22497,BJ@0.137255,GM12878@0.467271,H1HESC@0.0424875,HELAS3@0.625734,HEPG2@0.263195,HMEC@0.049059,HSMM@0.0676955,HUVEC@0.081273,K562@0.674305,MCF7@0.252988,NHEK@0.211162,NHLF@0.069295,SKNSHRA@0.20132, 0 0 0 0 ENSG00000236016.1 ENST00000421594.1 chr6:86340107-86340841 2 552 180 intronic -2.38 0 0,0,0 0 0,0,0 0 0 0 0 0 0 0 0 0 0 0 chimp,horse,human,macaque,marmoset,orangutan, antisense antisense A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0.0053645,HELAS3@0.0226035,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0.004833,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000203875.4 ENST00000369605.4 chr6:86386725-86388420 5 976 711 intergenic 0.67 1 1,1,1 1 0,0,0 23.4795081967213 80.1026722925457 11.472 0.743852459016394 89.9127988748242 41.495 2.48155737704918 99.0464135021097 43.481 0 0 chimp,horse,human,macaque,marmoset,orangutan,pig, lincRNA non_coding A549@82.758,AG04450@12.3527,BJ@36.3002,GM12878@32.4974,H1HESC@31.0468,HELAS3@23.3736,HEPG2@27.9715,HMEC@26.0295,HSMM@62.1154,HUVEC@26.7516,K562@89.4081,MCF7@35.8637,NHEK@38.6111,NHLF@56.9381,SKNSHRA@32.995, 0 0 0 0 ENSG00000203875.4 ENST00000427501.1 chr6:86386800-86387711 2 678 231 intergenic 0 1 0,0,1 0 0,0,0 41.7522123893805 224.666666666667 0.956 41.7227138643068 148.116883116883 28.781 44.7035398230089 167.268398268398 33.948 0 0 cat,chimp,cow,dog,guinea_pig,horse,human,macaque,marmoset,orangutan,pig,rabbit, lincRNA retained_intron A549@82.758,AG04450@12.3527,BJ@36.3002,GM12878@32.4974,H1HESC@31.0468,HELAS3@23.3736,HEPG2@27.9715,HMEC@26.0295,HSMM@62.1154,HUVEC@26.7516,K562@89.4081,MCF7@35.8637,NHEK@38.6111,NHLF@56.9381,SKNSHRA@32.995, 0 0 0 0 ENSG00000203875.4 ENST00000435947.1 chr6:86386800-86388370 3 693 873 intergenic 5.25 1 1,1,1 1 0,0,0 33.0678210678211 65.2382588774341 11.472 1.04761904761905 73.2279495990836 41.495 3.49494949494949 80.6666666666667 43.481 0 0 cat,chimp,horse,human,macaque,marmoset,orangutan,pig, lincRNA processed_transcript A549@82.758,AG04450@12.3527,BJ@36.3002,GM12878@32.4974,H1HESC@31.0468,HELAS3@23.3736,HEPG2@27.9715,HMEC@26.0295,HSMM@62.1154,HUVEC@26.7516,K562@89.4081,MCF7@35.8637,NHEK@38.6111,NHLF@56.9381,SKNSHRA@32.995, 0 0 0 0 ENSG00000203875.4 ENST00000428833.1 chr6:86386802-86388238 4 637 793 intergenic 0.67 1 1,1,1 1 0,0,0 35.9748822605965 71.8196721311475 11.472 1.13971742543171 80.6153846153846 41.495 3.8021978021978 88.8045397225725 43.481 0 0 chimp,horse,human,macaque,marmoset,orangutan, lincRNA non_coding A549@82.758,AG04450@12.3527,BJ@36.3002,GM12878@32.4974,H1HESC@31.0468,HELAS3@23.3736,HEPG2@27.9715,HMEC@26.0295,HSMM@62.1154,HUVEC@26.7516,K562@89.4081,MCF7@35.8637,NHEK@38.6111,NHLF@56.9381,SKNSHRA@32.995, 0 0 0 0 ENSG00000203875.4 ENST00000453754.1 chr6:86386802-86388291 4 397 1086 intergenic 6.87 1 1,1,1 1 0,0,0 57.7229219143577 52.4429097605893 11.472 1.82871536523929 58.865561694291 41.495 6.1007556675063 64.8453038674033 43.481 0 0 cat,chimp,human,macaque,marmoset,orangutan, lincRNA processed_transcript A549@82.758,AG04450@12.3527,BJ@36.3002,GM12878@32.4974,H1HESC@31.0468,HELAS3@23.3736,HEPG2@27.9715,HMEC@26.0295,HSMM@62.1154,HUVEC@26.7516,K562@89.4081,MCF7@35.8637,NHEK@38.6111,NHLF@56.9381,SKNSHRA@32.995, 0 0 0 0 ENSG00000203875.4 ENST00000420199.1 chr6:86386802-86388440 4 998 634 intergenic 0.67 1 1,1,1 1 0,0,0 22.9619238476954 89.8312302839117 11.472 0.727454909819639 100.832807570978 41.495 2.42685370741483 111.07570977918 43.481 0 0 cat,chimp,dog,horse,human,macaque,marmoset,orangutan,pig,rabbit, lincRNA retained_intron A549@82.758,AG04450@12.3527,BJ@36.3002,GM12878@32.4974,H1HESC@31.0468,HELAS3@23.3736,HEPG2@27.9715,HMEC@26.0295,HSMM@62.1154,HUVEC@26.7516,K562@89.4081,MCF7@35.8637,NHEK@38.6111,NHLF@56.9381,SKNSHRA@32.995, 0 0 0 0 ENSG00000203875.4 ENST00000414002.1 chr6:86386802-86388451 6 424 1215 intergenic -2.54 1 1,1,1 1 0,0,0 54.0471698113208 46.8748971193416 11.472 6.80660377358491 52.6156378600823 39.335 11.372641509434 57.9604938271605 41.081 0 0 cat,chimp,cow,dog,horse,human,macaque,marmoset,orangutan,panda, lincRNA non_coding A549@82.758,AG04450@12.3527,BJ@36.3002,GM12878@32.4974,H1HESC@31.0468,HELAS3@23.3736,HEPG2@27.9715,HMEC@26.0295,HSMM@62.1154,HUVEC@26.7516,K562@89.4081,MCF7@35.8637,NHEK@38.6111,NHLF@56.9381,SKNSHRA@32.995, 0 0 0 0 ENSG00000203875.4 ENST00000431043.1 chr6:86386846-86388451 3 995 606 intergenic -2.54 1 1,1,1 1 0,0,0 80.9477386934673 0 11.472 65.2371859296482 3.94389438943894 39.335 73.6201005025126 4.14191419141914 41.081 0 0 cat,chimp,dog,guinea_pig,horse,human,macaque,marmoset,orangutan,pig,rabbit, lincRNA retained_intron A549@82.758,AG04450@12.3527,BJ@36.3002,GM12878@32.4974,H1HESC@31.0468,HELAS3@23.3736,HEPG2@27.9715,HMEC@26.0295,HSMM@62.1154,HUVEC@26.7516,K562@89.4081,MCF7@35.8637,NHEK@38.6111,NHLF@56.9381,SKNSHRA@32.995, 0 0 0 0 ENSG00000203875.4 ENST00000433843.1 chr6:86387047-86387917 4 384 480 intergenic -2.54 0 0,1,1 0 0,0,0 143.049479166667 10.53125 11.472 58.3854166666667 61.9020833333333 41.495 65.6484375 66.2145833333333 43.481 0 0 cat,chimp,cow,dog,horse,human,macaque,marmoset,orangutan,rabbit, lincRNA non_coding A549@82.758,AG04450@12.3527,BJ@36.3002,GM12878@32.4974,H1HESC@31.0468,HELAS3@23.3736,HEPG2@27.9715,HMEC@26.0295,HSMM@62.1154,HUVEC@26.7516,K562@89.4081,MCF7@35.8637,NHEK@38.6111,NHLF@56.9381,SKNSHRA@32.995, 0 0 0 0 ENSG00000203875.4 ENST00000425170.1 chr6:86387187-86387977 2 487 301 intergenic 3.18 0 0,0,1 0 0,0,0 15.9158110882957 16.7940199335548 11.472 5.88911704312115 90.7740863787375 41.495 9.59548254620123 97.2524916943522 43.481 0 0 cat,chimp,cow,dog,elephant,horse,human,macaque,marmoset,orangutan,panda,pig,rabbit, lincRNA retained_intron A549@82.758,AG04450@12.3527,BJ@36.3002,GM12878@32.4974,H1HESC@31.0468,HELAS3@23.3736,HEPG2@27.9715,HMEC@26.0295,HSMM@62.1154,HUVEC@26.7516,K562@89.4081,MCF7@35.8637,NHEK@38.6111,NHLF@56.9381,SKNSHRA@32.995, 0 0 0 0 ENSG00000226524.1 ENST00000448282.1 chr6:88081311-88102519 4 538 20664 intergenic -1.35 0 0,0,0 0 0,0,0 0 0 0 23.6877323420074 1.28290747193186 0 30.0799256505576 2.44057297715834 0 0 0 chimp,horse,human,macaque,marmoset,orangutan, lincRNA lincRNA A549@0.119515,AG04450@0.045103,BJ@0.033198,GM12878@0.0604225,H1HESC@0.027014,HELAS3@0.028976,HEPG2@0.0530305,HMEC@0.022664,HSMM@0.047194,HUVEC@0.039415,K562@0.632445,MCF7@0.261484,NHEK@0.114808,NHLF@0.0931995,SKNSHRA@0.229205, 0 0 0 0 ENSG00000224345.1 ENST00000420494.1 chr6:88410228-88411243 2 411 602 exonic -1.66 0 0,1,1 0 0,0,0 71.9416058394161 57.7358803986711 0 158.817518248175 161.400332225914 37.146 152.946472019465 132.925249169435 35.043 0 0 cat,chimp,cow,dog,elephant,horse,human,macaque,marmoset,mouse,opossum,orangutan,panda,pig,rabbit,rat, antisense antisense A549@0.0171995,AG04450@0.005427,BJ@0,GM12878@0.021724,H1HESC@0,HELAS3@0,HEPG2@0.036112,HMEC@0,HSMM@0,HUVEC@0,K562@0.081966,MCF7@0,NHEK@0.009434,NHLF@0.009344,SKNSHRA@0.0065125, 0 0 0 0 ENSG00000234426.1 ENST00000429137.1 chr6:89008669-89130752 3 302 121777 intergenic 0 0 0,1,0 0 0,0,0 22.1258278145695 10.2166583180732 0 30.3907284768212 17.8780147318459 0 9.00662251655629 19.2882974617539 16.817 0 0 cat,chimp,horse,human,macaque,marmoset,orangutan,pig, lincRNA lincRNA A549@0,AG04450@0.029119,BJ@0,GM12878@0.195954,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0.649182,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000198833.4 ENST00000435041.1 chr6:90036344-90039278 1 2934 0 intergenic -4.00 1 0,0,1 0 0,0,1 19.653715064758 0 103.641 73.906612133606 0 171.161 68.4798909338787 0 181.388 0 0 chimp,human,marmoset,orangutan, lincRNA lincRNA A549@5.04758,AG04450@6.89604,BJ@4.7713,GM12878@20.4759,H1HESC@1.44137,HELAS3@6.59038,HEPG2@3.42979,HMEC@2.80885,HSMM@10.5326,HUVEC@7.22324,K562@5.97316,MCF7@5.55585,NHEK@4.01892,NHLF@7.89864,SKNSHRA@4.29856, 0 0 0 0 ENSG00000237027.1 ENST00000438267.1 chr6:90270594-90276763 2 809 5358 exonic -6.20 0 0,0,1 0 0,0,0 50.5067985166873 7.77155655095185 51.756 65.9270704573548 18.3488241881299 54.819 73.7861557478368 20.8206420306084 63.828 0 0 chimp,cow,dog,horse,human,macaque,marmoset,orangutan,panda, antisense antisense A549@0,AG04450@0.007952,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0.006057,MCF7@0.002535,NHEK@0,NHLF@0,SKNSHRA@0.0028025, 0 0 0 0 ENSG00000237027.1 ENST00000425588.1 chr6:90272109-90276690 3 439 4138 exonic 0 0 0,0,1 0 0,0,0 17.5808656036446 6.95021749637506 84.898 36.6605922551253 16.3344610923151 100.517 44.2733485193622 18.532866118898 108.756 0 0 cat,chimp,cow,dog,guinea_pig,horse,human,macaque,marmoset,orangutan, antisense antisense A549@0,AG04450@0.007952,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0.006057,MCF7@0.002535,NHEK@0,NHLF@0,SKNSHRA@0.0028025, 0 0 0 0 ENSG00000228124.1 ENST00000438877.1 chr6:90383188-90385502 2 470 1842 exonic 10.23 0 0,0,1 0 0,0,0 3.82978723404255 49.414223669924 68.01 101.146808510638 69.8659066232356 139.616 95.5446808510638 70.1867535287731 122.266 0 0 chimp,cow,dog,elephant,horse,human,macaque,marmoset,orangutan,panda,pig, antisense antisense A549@0.044884,AG04450@0.145429,BJ@0.238575,GM12878@0.144007,H1HESC@0.006166,HELAS3@0.159335,HEPG2@0.0644115,HMEC@0.121451,HSMM@0.126648,HUVEC@0.327248,K562@0.0268555,MCF7@0.19965,NHEK@0.005409,NHLF@0.053419,SKNSHRA@0.239465, 0 0 0 0 ENSG00000232532.1 ENST00000458201.1 chr6:90629915-90631479 2 754 808 intergenic -0.24 1 0,0,1 0 0,0,0 14.0238726790451 6.15841584158416 14.96 27.1180371352785 6.17574257425743 0 30.1299734748011 11.049504950495 0 0 0 chimp,elephant,horse,human,macaque,orangutan, antisense antisense A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0.049823,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0.003678, 0 0 0 0 ENSG00000226455.1 ENST00000413986.1 chr6:90659835-90661708 2 416 1455 exonic 1.74 0 0,0,0 0 0,0,0 456.966346153846 434.236426116839 0 380.480769230769 455.453608247423 0.92 468.579326923077 509.965635738832 1.912 0 0 cat,chimp,cow,dog,elephant,guinea_pig,horse,human,macaque,marmoset,mouse,opossum,orangutan,panda,pig,platypus,rabbit,rat, antisense antisense A549@0,AG04450@0,BJ@0,GM12878@0.0121255,H1HESC@0.0071095,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0.030099,HUVEC@0,K562@0.008411,MCF7@0,NHEK@0.00602833,NHLF@0,SKNSHRA@0.0064345, 0 0 0 0 ENSG00000226455.1 ENST00000445838.1 chr6:90660130-90662905 3 873 1898 exonic 1.74 0 0,1,0 0 0,0,0 366.502863688431 255.114330874605 99.45 317.627720504009 273.249209694415 113.413 346.224513172967 494.252897787144 121.82 0 0 cat,chimp,cow,dog,elephant,guinea_pig,horse,human,macaque,marmoset,mouse,opossum,orangutan,panda,pig,rabbit,rat, antisense antisense A549@0,AG04450@0,BJ@0,GM12878@0.0121255,H1HESC@0.0071095,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0.030099,HUVEC@0,K562@0.008411,MCF7@0,NHEK@0.00602833,NHLF@0,SKNSHRA@0.0064345, 0 0 0 0 ENSG00000224605.1 ENST00000434493.1 chr6:92100031-92102718 3 439 2244 intergenic 0.63 1 0,0,0 0 0,0,0 0 0 0 49.8587699316629 5.94652406417112 4.08 135.328018223235 36.8373440285205 4.448 0 0 chimp,dog,elephant,guinea_pig,horse,human,macaque,marmoset,orangutan, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000224944.1 ENST00000437768.1 chr6:92339633-92400146 4 729 59778 intergenic 2.60 0 0,0,0 0 0,0,0 74.8422496570645 52.7932516979491 0 71.0864197530864 48.5530629997658 0 69.8477366255144 45.8048613202181 0 0 0 cat,chimp,cow,dog,horse,human,macaque,marmoset,orangutan,pig,rabbit, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0.039397,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0.002807,HUVEC@0,K562@0,MCF7@0,NHEK@0.001801,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000220908.2 ENST00000404689.2 chr6:93432721-93433547 2 591 233 intergenic -2.87 0 0,0,0 0 0,0,0 0 0 0 0 0 0 0 0 0 0 0 chimp,human,orangutan, lincRNA lincRNA A549@0,AG04450@0,BJ@0.110273,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0.0230645,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 49 3 0 0 ENSG00000235099.1 ENST00000452624.1 chr6:93780105-93813102 2 737 32258 intergenic 0.90 0 0,0,0 0 0,0,0 0 28.739196478393 0 17.6770691994573 36.8738297476595 20.799 18.4667571234735 56.6556203112406 23.366 0 0 chimp,cow,dog,guinea_pig,human,macaque,marmoset,orangutan,rabbit, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000229600.1 ENST00000424678.1 chr6:94596618-94599128 2 482 2026 intergenic -4.88 0 0,0,1 0 0,0,0 0 0 167.325 5.87136929460581 0 234.118 6.90871369294606 0 219.908 0 0 chimp,dog,elephant,horse,human,macaque,marmoset,mouse,orangutan,panda,pig, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0.05167,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000231143.1 ENST00000424506.1 chr6:94873638-94904376 2 263 30473 intergenic 0 0 0,0,0 0 0,0,0 0 2.44396679027336 0 0 5.92134020280248 0 0 10.8828799264923 0 0 0 chimp,cow,dog,horse,human,macaque,marmoset,orangutan,rabbit, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000233797.1 ENST00000430796.1 chr6:96806250-96969545 7 541 162742 intergenic -6.68 0 0,1,0 1 0,0,0 0 3.70368435929262 30.883 0 7.11367686276437 59.871 0 8.80181514298705 66.053 0 0 chimp,human,macaque,marmoset,orangutan, antisense antisense A549@0.007922,AG04450@0.0203635,BJ@0.008832,GM12878@0.0352375,H1HESC@0.0153615,HELAS3@0.009108,HEPG2@0,HMEC@0,HSMM@0.0083195,HUVEC@0,K562@0.018894,MCF7@0.0148415,NHEK@0.00232933,NHLF@0.003521,SKNSHRA@0.013362, 0 0 0 0 ENSG00000224384.1 ENST00000442184.1 chr6:97233013-97243697 3 478 10202 intergenic -2.92 0 0,0,0 0 0,0,0 32.4225941422594 25.0438149382474 0 11.1652719665272 27.7089786316409 3.179 11.6569037656904 30.6873162125073 3.245 0 0 chimp,cow,dog,horse,human,macaque,marmoset,orangutan,rabbit, antisense antisense A549@0,AG04450@0,BJ@0,GM12878@0.004191,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0.0111325,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000226684.1 ENST00000457513.1 chr6:97731179-97753974 2 405 22388 intergenic 0.09 0 0,0,0 0 0,0,0 209.027160493827 23.1793818116848 0 198.923456790123 20.5639628372342 59.923 169.21975308642 20.8745309987493 65.806 0 0 cat,chimp,cow,dog,elephant,guinea_pig,horse,human,macaque,marmoset,orangutan,panda,rabbit, antisense antisense A549@0,AG04450@0.0079225,BJ@0,GM12878@0.0294795,H1HESC@0.046703,HELAS3@0.170613,HEPG2@0.0647875,HMEC@0,HSMM@0,HUVEC@0.0238965,K562@0.039825,MCF7@0.00494,NHEK@0.00957333,NHLF@0,SKNSHRA@0.10363, 0 0 0 0 ENSG00000224849.2 ENST00000433637.1 chr6:98150157-98155979 2 499 5321 intergenic -1.82 0 0,0,0 0 0,0,0 542.717434869739 94.7983461755309 0 578.789579158317 419.632211990227 1.434 426.867735470942 496.971997744785 17.363 0 0 cat,chimp,cow,dog,elephant,guinea_pig,horse,human,macaque,marmoset,mouse,opossum,orangutan,panda,pig,platypus,rabbit,rat, lincRNA lincRNA A549@0,AG04450@0,BJ@0.00483,GM12878@0.0173715,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0.008214,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0.011554,SKNSHRA@0.0543985, 0 0 0 0 ENSG00000242486.1 ENST00000417315.1 chr6:98155635-98180588 2 355 24596 intergenic 0 0 0,0,0 0 0,0,0 82.5211267605634 55.7145877378436 378.882 98.2394366197183 45.3958773784355 273.978 107.439436619718 41.8972597170272 264.29 0 0 cat,chimp,cow,dog,elephant,guinea_pig,horse,human,macaque,marmoset,orangutan,panda,pig,rabbit,rat, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000226207.1 ENST00000432438.1 chr6:98158829-98165073 3 496 5744 intergenic -0.58 0 0,0,1 0 0,0,0 113.612903225806 0.408774373259053 276.392 0 1.9375 94.371 6.57862903225806 2.99738857938719 111.202 0 0 chimp,human,macaque,orangutan,rabbit, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000236920.1 ENST00000418652.1 chr6:98657896-98662559 2 769 3892 intergenic -21.20 0 0,0,0 0 0,0,0 35.7893368010403 0.75 0 23.1911573472042 0.45863309352518 2.39 15.7815344603381 0.476618705035971 2.51 0 0 chimp,cow,dog,elephant,guinea_pig,horse,human,macaque,marmoset,mouse,orangutan,panda,pig,rabbit,rat, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0.0169445,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000225994.1 ENST00000439279.1 chr6:98723022-98727735 2 224 4487 intergenic 4.16 0 0,0,0 0 0,0,0 374.294642857143 24.4138622687765 437.996 285.357142857143 15.1011811901047 446.067 203.919642857143 17.3712948517941 429.464 0 0 cat,chimp,cow,dog,elephant,guinea_pig,horse,human,macaque,mouse,opossum,orangutan,pig,rabbit,rat, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0.0262995,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000228506.1 ENST00000418945.1 chr6:99872798-99879249 2 1636 4813 exonic 3.71 0 0,1,0 1 0,0,0 35.481662591687 0 6.692 64.0091687041565 2.59858715977561 12.716 54.0550122249389 2.7220029087887 12.346 0 0 chimp,human,marmoset, antisense antisense A549@0.721461,AG04450@1.14837,BJ@1.39773,GM12878@5.01708,H1HESC@2.95691,HELAS3@4.31254,HEPG2@3.50409,HMEC@0.684937,HSMM@1.10333,HUVEC@1.44921,K562@3.54979,MCF7@1.61768,NHEK@0.776014,NHLF@0.834844,SKNSHRA@3.06233, 0 0 0 0 ENSG00000228439.1 ENST00000452647.1 chr6:99968569-99979716 4 878 10263 exonic 8.18 0 0,0,1 0 0,0,1 55.4145785876993 2.91094221962389 36.138 144.755125284738 6.18785930039949 2.55 113.371298405467 6.2508038585209 8.482 0 0 chimp,cow,elephant,horse,human,macaque,mouse,orangutan,panda,pig,rabbit,rat, antisense antisense A549@0.326727,AG04450@0.377914,BJ@0.296092,GM12878@0.228241,H1HESC@0.210232,HELAS3@0.565366,HEPG2@0.166705,HMEC@0.273903,HSMM@0.202436,HUVEC@0.170582,K562@0.361386,MCF7@0.825608,NHEK@0.234166,NHLF@0.882462,SKNSHRA@0.273285, 0 0 0 0 ENSG00000229315.1 ENST00000443234.1 chr6:100441820-100524287 3 430 82033 exonic -5.27 0 0,0,0 0 0,0,0 0 5.50655224117124 0 0 6.3427888776468 0 0 9.05067472846294 0 0 0 chimp,human,marmoset,orangutan, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000229315.1 ENST00000430122.1 chr6:100441932-100524287 3 521 81830 exonic -5.27 0 0,1,0 0 0,0,0 0 5.52021263595258 0 4.12859884836852 6.33223756568496 0 4.19769673704415 9.04640107540022 0 0 0 chimp,human,macaque,marmoset,orangutan, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000229315.1 ENST00000452482.1 chr6:100441942-100474260 4 817 31495 exonic -4.90 0 0,1,0 0 0,0,0 0 5.64365772344817 0 2.6328029375765 5.62324178441022 0 2.67686658506732 6.33062390855691 0 0 0 human,macaque, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000229315.1 ENST00000451220.1 chr6:100448816-100524282 5 425 75033 intergenic -0.90 0 0,1,0 0 0,0,0 0 6.02027108072448 0 0 6.6327482574334 3.72 0 9.59848333399971 3.975 0 0 cat,chimp,horse,human,macaque,marmoset,orangutan, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000228082.1 ENST00000411442.1 chr6:100874994-100885360 2 378 9986 intronic 0 0 0,0,0 0 0,0,0 64.0740740740741 34.4049669537352 230.626 192.111111111111 46.5986380933307 221.011 178.240740740741 48.2595633887443 214.245 0 0 cat,chimp,cow,dog,guinea_pig,horse,human,macaque,marmoset,mouse,opossum,orangutan,panda,pig,rabbit,rat, antisense antisense A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0.0270735,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000227535.1 ENST00000422930.1 chr6:105278973-105293693 2 276 14442 intronic 0 0 0,1,0 0 0,0,0 0 11.3167151364077 0 8.08695652173913 10.2737155518626 0 10.3224637681159 16.7394405207035 0 0 0 chimp,cow,dog,elephant,guinea_pig,horse,human,macaque,marmoset,mouse,orangutan,panda,pig, antisense antisense A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000231628.1 ENST00000452363.1 chr6:105726891-105729630 2 1196 1541 exonic -4.72 0 0,1,1 0 0,0,0 5.29765886287625 0 106.872 8.53260869565217 0 125.612 9.58779264214047 0 139.175 0 0 chimp,elephant,human,marmoset,orangutan, antisense antisense A549@0.0077735,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0.0088615,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0.0181155,MCF7@0.0050345,NHEK@0,NHLF@0,SKNSHRA@0.050448, 0 0 0 0 ENSG00000237567.1 ENST00000423489.1 chr6:106060542-106080071 6 583 18936 intergenic -1.84 0 0,0,0 0 0,0,0 9.32075471698113 18.8794888043937 8.97 2.04974271012007 32.3376637093367 0 2.15265866209262 33.5689691592733 0 0 0 chimp,human,macaque,marmoset,orangutan,panda,pig, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0.009017,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000233941.1 ENST00000449180.1 chr6:106806441-106807592 2 412 737 intergenic -10.42 0 0,0,0 0 0,0,0 0 0 0 0 0 2.893 0 0 3.179 0 0 chimp,human,macaque,marmoset,orangutan, antisense antisense A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0.005977,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0.009823,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000229654.1 ENST00000424162.1 chr6:107143410-107147869 3 416 4039 intergenic -2.11 1 0,0,0 0 0,0,0 0 13.9749938103491 0 8.17067307692308 31.5914830403565 6.061 15.4471153846154 22.9101262688784 6.099 0 0 chimp,guinea_pig,human,macaque,marmoset,orangutan, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0.009622,H1HESC@0,HELAS3@0.0053925,HEPG2@0,HMEC@0,HSMM@0.0049105,HUVEC@0,K562@0,MCF7@0.0194105,NHEK@0,NHLF@0,SKNSHRA@0.0162445, 0 0 0 0 ENSG00000235142.1 ENST00000436659.1 chr6:107165327-107235300 7 1380 68581 intergenic -0.47 1 0,1,0 0 0,0,0 0 9.57246176054592 29.007 0 13.7143961155422 15.956 0 14.04619355215 24.574 0 0 chimp,horse,human,macaque,orangutan, lincRNA processed_transcript A549@0.658477,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0.138963,HEPG2@0.610185,HMEC@0,HSMM@0.0075775,HUVEC@0,K562@0,MCF7@0,NHEK@0.0222693,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000235142.1 ENST00000428750.1 chr6:107165867-107235306 6 799 68630 intergenic -0.47 0 0,1,0 0 0,0,0 0 9.56562727670115 29.007 0 13.704604400408 15.956 0 14.036164942445 24.574 0 0 chimp,human,macaque,orangutan, lincRNA processed_transcript A549@0.658477,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0.138963,HEPG2@0.610185,HMEC@0,HSMM@0.0075775,HUVEC@0,K562@0,MCF7@0,NHEK@0.0222693,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000235142.1 ENST00000418134.1 chr6:107172490-107187962 4 646 14820 intergenic 0 0 0,0,0 0 0,0,0 0 0.465384615384615 0 0 1.05364372469636 6.718 0 1.58967611336032 6.927 0 0 chimp,human,macaque,orangutan, lincRNA processed_transcript A549@0.658477,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0.138963,HEPG2@0.610185,HMEC@0,HSMM@0.0075775,HUVEC@0,K562@0,MCF7@0,NHEK@0.0222693,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000235142.1 ENST00000415714.1 chr6:107194960-107220168 2 258 24948 intergenic -6.26 1 0,0,1 0 0,0,0 0 16.287037037037 22.644 0 15.4430816097483 81.234 0 15.8336940836941 75.534 0 0 cat,chimp,horse,human,macaque,marmoset,orangutan,pig,rabbit, lincRNA processed_transcript A549@0.658477,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0.138963,HEPG2@0.610185,HMEC@0,HSMM@0.0075775,HUVEC@0,K562@0,MCF7@0,NHEK@0.0222693,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000235142.1 ENST00000433965.1 chr6:107194965-107235349 3 567 39813 intergenic -6.26 1 0,1,1 0 0,0,0 0 14.3882651395273 29.007 0 19.5134001456811 15.956 0 19.6025670007284 24.574 0 0 chimp,dog,elephant,horse,human,macaque,marmoset,orangutan,pig,rabbit, lincRNA processed_transcript A549@0.658477,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0.138963,HEPG2@0.610185,HMEC@0,HSMM@0.0075775,HUVEC@0,K562@0,MCF7@0,NHEK@0.0222693,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000235142.1 ENST00000427903.1 chr6:107195125-107235310 4 524 39655 intergenic -1.26 0 0,1,0 0 0,0,0 0 14.4455932417097 29.007 0 19.5911486571681 15.956 0 19.6806707855252 24.574 0 0 chimp,cow,dog,elephant,horse,human,macaque,marmoset,orangutan,pig,rabbit, lincRNA processed_transcript A549@0.658477,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0.138963,HEPG2@0.610185,HMEC@0,HSMM@0.0075775,HUVEC@0,K562@0,MCF7@0,NHEK@0.0222693,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000235142.1 ENST00000430094.1 chr6:107219993-107235354 4 624 14731 intergenic 0.95 0 0,1,0 0 0,0,0 0 11.3034417215396 29.007 8.02724358974359 26.4631050166316 15.956 9.67147435897436 25.9879166383816 24.574 0 0 chimp,horse,human,macaque,marmoset,orangutan,rabbit, lincRNA processed_transcript A549@0.658477,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0.138963,HEPG2@0.610185,HMEC@0,HSMM@0.0075775,HUVEC@0,K562@0,MCF7@0,NHEK@0.0222693,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000234206.1 ENST00000441532.1 chr6:107831007-107832640 3 335 1294 intronic -2.38 1 0,0,0 0 0,0,0 104.197014925373 17.838485316847 27.846 58.7701492537313 14.7797527047913 91.678 53.4417910447761 17.3044822256569 95.193 0 0 cat,chimp,cow,dog,elephant,guinea_pig,horse,human,macaque,marmoset,orangutan,panda,pig, antisense antisense A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000234206.1 ENST00000437040.1 chr6:107831007-107832925 2 327 1589 intronic 3.61 1 0,0,0 0 0,0,0 106.746177370031 14.5267463813719 49.841 133.107033639144 12.0358716173694 68.584 139.25993883792 14.0918816865953 68.335 0 0 chimp,cow,dog,elephant,guinea_pig,horse,human,macaque,marmoset,mouse,opossum,orangutan,panda,pig,rabbit,rat, antisense antisense A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000225174.1 ENST00000426008.1 chr6:108444719-108477902 2 715 32466 intronic 6.90 0 0,0,0 0 0,0,0 133.622377622378 20.4778845561511 24.495 54.0853146853147 21.08519682129 36.135 59.0643356643357 28.8988788270806 37.684 0 0 cat,chimp,guinea_pig,horse,human,macaque,orangutan,panda,pig,rabbit, lincRNA processed_transcript A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0.0006805, 0 0 0 0 ENSG00000225174.1 ENST00000441184.1 chr6:108444837-108480596 2 3332 32425 intronic 4.60 1 0,1,0 0 0,0,0 144.861344537815 20.5037779491133 66.385 185.984093637455 21.074232845027 44.155 201.448379351741 28.8979182729375 50.417 0 0 chimp,elephant,human,orangutan, lincRNA processed_transcript A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0.0006805, 0 0 0 0 ENSG00000230248.1 ENST00000419801.1 chr6:108596846-108597750 2 630 272 intergenic -0.41 0 0,0,0 0 0,0,0 0 0 0 3.41428571428571 0 0 8.6 0 0 0 0 chimp,human,macaque,orangutan, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0.007348,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000203801.4 ENST00000416104.1 chr6:109072857-109089659 3 1782 15016 intergenic 0.37 0 0,0,0 0 0,0,0 33.7901234567901 23.467168353756 15.62 22.1212121212121 15.3559536494406 16.012 62.692480359147 19.0295018646777 16.56 0 0 cat,chimp,cow,dog,elephant,horse,human,macaque,marmoset,orangutan, lincRNA lincRNA A549@0.0085455,AG04450@0.0267815,BJ@0.058529,GM12878@0.0045495,H1HESC@0.0293105,HELAS3@0.0180495,HEPG2@0.02429,HMEC@0,HSMM@0.0114875,HUVEC@0.00838,K562@0.02075,MCF7@0.0496865,NHEK@0.0210353,NHLF@0.0118875,SKNSHRA@0.135002, 0 0 0 0 ENSG00000203801.4 ENST00000444910.1 chr6:109072857-109090321 4 591 16867 intergenic 1.61 0 0,0,0 0 0,0,0 0 26.4444773818699 15.62 0 16.0372917531274 16.012 0 23.8990929033023 16.56 0 0 cat,chimp,human,macaque,orangutan, lincRNA lincRNA A549@0.0085455,AG04450@0.0267815,BJ@0.058529,GM12878@0.0045495,H1HESC@0.0293105,HELAS3@0.0180495,HEPG2@0.02429,HMEC@0,HSMM@0.0114875,HUVEC@0.00838,K562@0.02075,MCF7@0.0496865,NHEK@0.0210353,NHLF@0.0118875,SKNSHRA@0.135002, 0 0 0 0 ENSG00000203801.4 ENST00000448744.1 chr6:109072859-109091145 5 1746 16532 intergenic 1.61 0 0,0,0 0 0,0,0 31.1408934707904 23.6719695136705 15.62 4.47995418098511 15.8891241229131 16.012 7.36426116838488 23.6056133559158 16.56 0 0 chimp,dog,horse,human,macaque,orangutan,pig, lincRNA lincRNA A549@0.0085455,AG04450@0.0267815,BJ@0.058529,GM12878@0.0045495,H1HESC@0.0293105,HELAS3@0.0180495,HEPG2@0.02429,HMEC@0,HSMM@0.0114875,HUVEC@0.00838,K562@0.02075,MCF7@0.0496865,NHEK@0.0210353,NHLF@0.0118875,SKNSHRA@0.135002, 0 0 0 0 ENSG00000203801.4 ENST00000416890.1 chr6:109073021-109089659 5 597 16033 intergenic -1.57 0 0,0,0 0 0,0,0 35.0586264656616 24.4087195159983 15.62 12.2713567839196 16.3836462296513 16.012 131.670016750419 19.8876068109524 16.56 0 0 chimp,human,macaque,marmoset,orangutan, lincRNA lincRNA A549@0.0085455,AG04450@0.0267815,BJ@0.058529,GM12878@0.0045495,H1HESC@0.0293105,HELAS3@0.0180495,HEPG2@0.02429,HMEC@0,HSMM@0.0114875,HUVEC@0.00838,K562@0.02075,MCF7@0.0496865,NHEK@0.0210353,NHLF@0.0118875,SKNSHRA@0.135002, 0 0 0 0 ENSG00000203801.4 ENST00000417773.1 chr6:109080364-109090321 4 595 9356 intergenic 1.98 0 0,0,0 0 0,0,0 0 30.772338606242 0 0 19.8315519452758 0 0 33.1246259085079 0 0 0 chimp,human,macaque,orangutan, lincRNA lincRNA A549@0.0085455,AG04450@0.0267815,BJ@0.058529,GM12878@0.0045495,H1HESC@0.0293105,HELAS3@0.0180495,HEPG2@0.02429,HMEC@0,HSMM@0.0114875,HUVEC@0.00838,K562@0.02075,MCF7@0.0496865,NHEK@0.0210353,NHLF@0.0118875,SKNSHRA@0.135002, 0 0 0 0 ENSG00000203801.4 ENST00000368974.3 chr6:109080368-109090321 4 1113 8834 intergenic 1.98 0 0,0,0 0 0,0,0 48.8517520215633 26.3993660855784 0 7.02785265049416 20.1179533620104 0 11.5525606469003 33.6264432872991 0 0 0 chimp,human,macaque,marmoset,orangutan, lincRNA lincRNA A549@0.0085455,AG04450@0.0267815,BJ@0.058529,GM12878@0.0045495,H1HESC@0.0293105,HELAS3@0.0180495,HEPG2@0.02429,HMEC@0,HSMM@0.0114875,HUVEC@0.00838,K562@0.02075,MCF7@0.0496865,NHEK@0.0210353,NHLF@0.0118875,SKNSHRA@0.135002, 0 0 0 0 ENSG00000203801.4 ENST00000430898.1 chr6:109080664-109090208 3 324 9216 intergenic -5.92 0 0,0,0 0 0,0,0 0 31.2398003472222 0 0 20.1328125 0 0 33.6278211805556 0 0 0 chimp,human,macaque,orangutan, lincRNA lincRNA A549@0.0085455,AG04450@0.0267815,BJ@0.058529,GM12878@0.0045495,H1HESC@0.0293105,HELAS3@0.0180495,HEPG2@0.02429,HMEC@0,HSMM@0.0114875,HUVEC@0.00838,K562@0.02075,MCF7@0.0496865,NHEK@0.0210353,NHLF@0.0118875,SKNSHRA@0.135002, 0 0 0 0 ENSG00000230290.1 ENST00000426737.1 chr6:109244179-109245306 2 110 1015 intronic 1.91 0 0,0,0 0 0,0,0 0 0 0 0 4.56256157635468 0 0 6.7192118226601 0 0 0 NA antisense antisense A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000243587.3 ENST00000417143.1 chr6:109505130-109560593 15 2005 53430 intergenic -0.22 0 0,0,0 0 0,0,0 42.3690773067332 2.61603967808347 33.53 230.890274314215 1.86421486056523 23.873 259.322194513716 4.25139434774471 25.571 0 0 chimp,horse,human,macaque,orangutan,panda, lincRNA lincRNA A549@0.885204,AG04450@0.0031235,BJ@0.031138,GM12878@0.0196395,H1HESC@0.153778,HELAS3@0.059667,HEPG2@1.42153,HMEC@0,HSMM@0.0350505,HUVEC@0.0029075,K562@0.159505,MCF7@1.08169,NHEK@0.091388,NHLF@0.0019105,SKNSHRA@0.001831, 0 0 0 0 ENSG00000177460.6 ENST00000453496.1 chr6:109557817-109592217 11 2248 32132 intergenic 17.67 0 0,0,0 0 0,0,0 15.8465302491103 6.86782646582846 91.84 162.725533807829 6.21480144404332 0 191.111209964413 6.85229677579983 12.299 0 0 cat,chimp,dog,elephant,guinea_pig,horse,human,macaque,marmoset,mouse,orangutan,panda,rabbit,rat, lincRNA lincRNA A549@0.484832,AG04450@0.0023295,BJ@0.0060275,GM12878@0.0048095,H1HESC@0.256945,HELAS3@0.761779,HEPG2@2.12301,HMEC@0.001813,HSMM@0.032241,HUVEC@0.0074775,K562@0.631846,MCF7@0.534032,NHEK@0.07647,NHLF@0.0008635,SKNSHRA@0.013525, 67 2 37 2 ENSG00000243587.3 ENST00000534901.1 chr6:109557817-109592217 11 2248 32132 intergenic 17.67 0 0,0,0 0 0,0,0 15.8465302491103 6.86782646582846 91.84 162.725533807829 6.21480144404332 0 191.111209964413 6.85229677579983 12.299 0 0 cat,chimp,dog,elephant,guinea_pig,horse,human,macaque,marmoset,mouse,orangutan,panda,rabbit,rat, lincRNA lincRNA A549@0.885204,AG04450@0.0031235,BJ@0.031138,GM12878@0.0196395,H1HESC@0.153778,HELAS3@0.059667,HEPG2@1.42153,HMEC@0,HSMM@0.0350505,HUVEC@0.0029075,K562@0.159505,MCF7@1.08169,NHEK@0.091388,NHLF@0.0019105,SKNSHRA@0.001831, 67 2 37 2 ENSG00000223537.1 ENST00000423747.1 chr6:109809109-109830496 4 493 20888 exonic 1.84 0 0,0,0 0 0,0,0 58.4137931034483 15.2391325162773 0 136.795131845842 21.9927230945998 0 161.243407707911 24.6202604366143 9.324 0 0 cat,chimp,cow,dog,elephant,horse,human,macaque,marmoset,mouse,opossum,orangutan,panda,pig,rabbit,rat, antisense antisense A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0.0045865,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000232311.1 ENST00000458693.1 chr6:110147725-110149988 2 463 1798 intergenic -2.75 0 0,0,1 0 0,0,0 26.3282937365011 17.5739710789766 0 201.45788336933 9.31479421579533 0 209.07343412527 9.83370411568409 0 0 0 chimp,cow,dog,guinea_pig,horse,human,macaque,marmoset,orangutan,panda,rabbit, lincRNA lincRNA A549@0.138583,AG04450@0.135818,BJ@0.109399,GM12878@0.140222,H1HESC@0.0640945,HELAS3@0.085292,HEPG2@0.0392235,HMEC@0.017611,HSMM@0.00885,HUVEC@0.148284,K562@0.0115155,MCF7@0.18817,NHEK@0.131772,NHLF@0.024897,SKNSHRA@0.128822, 0 0 0 0 ENSG00000231046.1 ENST00000425364.1 chr6:111548950-111580237 4 429 30852 intergenic 4.75 1 0,0,1 0 0,0,0 0 2.26841047582004 0 8.58275058275058 4.31566835213276 33.844 10.3449883449883 5.95922468559575 41.642 0 0 chimp,dog,elephant,horse,human,macaque,marmoset,orangutan,pig, antisense antisense A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000230177.1 ENST00000444259.1 chr6:111599135-111599945 2 555 253 intergenic -6.09 0 0,1,1 0 0,0,0 0 0 17.02 0 0 0 0 0 0 0 0 chimp,human,macaque,marmoset,orangutan, antisense antisense A549@1.25591,AG04450@1.47904,BJ@0.659482,GM12878@4.43715,H1HESC@1.78708,HELAS3@3.21345,HEPG2@2.54665,HMEC@0.257292,HSMM@0.601055,HUVEC@1.22305,K562@3.61257,MCF7@1.18087,NHEK@1.52277,NHLF@0.374773,SKNSHRA@2.16928, 0 0 0 0 ENSG00000229276.1 ENST00000411895.1 chr6:111681844-111682810 2 380 584 intronic -9.12 0 0,0,1 0 0,0,0 0 0 0 0 0 5.562 0 0 5.634 0 0 NA sense_intronic sense_intronic A549@0.0357375,AG04450@0.113064,BJ@0.342902,GM12878@0.175867,H1HESC@0.012369,HELAS3@0.0621825,HEPG2@0.087563,HMEC@0,HSMM@0,HUVEC@0.122896,K562@0.048597,MCF7@0.145969,NHEK@0.011017,NHLF@0.115098,SKNSHRA@0.257517, 0 0 0 0 ENSG00000231889.2 ENST00000532226.1 chr6:111804714-111814206 2 2189 7301 exonic 0.27 1 0,1,0 1 0,0,0 3.61809045226131 7.71688809752089 0 18.5244403837369 15.1973702232571 220.921 21.1502969392417 14.1465552664019 235.643 1 1 chimp,human,macaque,marmoset,orangutan, lincRNA processed_transcript A549@1.52088,AG04450@1.02522,BJ@1.10051,GM12878@2.8747,H1HESC@3.42958,HELAS3@2.71019,HEPG2@3.74406,HMEC@0.183389,HSMM@1.46294,HUVEC@2.0581,K562@1.47959,MCF7@0.79275,NHEK@0.291015,NHLF@0.887828,SKNSHRA@1.80449, 0 0 0 0 ENSG00000231889.2 ENST00000525151.1 chr6:111804719-111824811 4 605 19481 exonic 3.62 1 1,1,1 1 0,0,0 80.5785123966942 7.3469534418151 0 178.348760330579 16.443919716647 220.921 169.869421487603 19.2963400236128 235.643 0 0 chimp,dog,guinea_pig,human,macaque,marmoset,orangutan,panda, lincRNA processed_transcript A549@1.52088,AG04450@1.02522,BJ@1.10051,GM12878@2.8747,H1HESC@3.42958,HELAS3@2.71019,HEPG2@3.74406,HMEC@0.183389,HSMM@1.46294,HUVEC@2.0581,K562@1.47959,MCF7@0.79275,NHEK@0.291015,NHLF@0.887828,SKNSHRA@1.80449, 0 0 0 0 ENSG00000231889.2 ENST00000438298.2 chr6:111804744-111898363 3 1103 92512 exonic 3.10 0 0,1,1 1 0,0,0 10.1504986400725 21.2848711518506 0 35.8250226654578 32.1166875648565 220.921 39.4487760652765 32.9635290556901 235.643 0 0 chimp,cow,dog,elephant,guinea_pig,horse,human,macaque,marmoset,mouse,orangutan,panda,pig,rabbit, lincRNA processed_transcript A549@1.52088,AG04450@1.02522,BJ@1.10051,GM12878@2.8747,H1HESC@3.42958,HELAS3@2.71019,HEPG2@3.74406,HMEC@0.183389,HSMM@1.46294,HUVEC@2.0581,K562@1.47959,MCF7@0.79275,NHEK@0.291015,NHLF@0.887828,SKNSHRA@1.80449, 0 0 0 0 ENSG00000231889.2 ENST00000442928.2 chr6:111804753-111908336 4 544 103033 exonic 3.10 0 0,1,1 1 0,0,0 20.5808823529412 22.5438548814458 0 67.9503676470588 33.1186804227771 220.921 70.7941176470588 34.029893335145 235.643 0 0 chimp,cow,dog,guinea_pig,human,macaque,marmoset,orangutan,rabbit, lincRNA processed_transcript A549@1.52088,AG04450@1.02522,BJ@1.10051,GM12878@2.8747,H1HESC@3.42958,HELAS3@2.71019,HEPG2@3.74406,HMEC@0.183389,HSMM@1.46294,HUVEC@2.0581,K562@1.47959,MCF7@0.79275,NHEK@0.291015,NHLF@0.887828,SKNSHRA@1.80449, 0 0 0 0 ENSG00000231889.2 ENST00000532353.1 chr6:111804758-111919505 2 574 114171 exonic 0.33 1 1,1,1 1 0,0,0 0 23.5741387918123 0 9.56794425087108 32.3509297457322 220.921 11.0871080139373 33.0479456254215 235.643 0 0 chimp,cow,horse,human,macaque,marmoset,orangutan,pig,rabbit, lincRNA processed_transcript A549@1.52088,AG04450@1.02522,BJ@1.10051,GM12878@2.8747,H1HESC@3.42958,HELAS3@2.71019,HEPG2@3.74406,HMEC@0.183389,HSMM@1.46294,HUVEC@2.0581,K562@1.47959,MCF7@0.79275,NHEK@0.291015,NHLF@0.887828,SKNSHRA@1.80449, 0 0 0 0 ENSG00000231889.2 ENST00000420651.2 chr6:111804761-111824714 2 322 19629 exonic 3.18 1 1,1,1 1 0,0,0 151.39751552795 7.29155840847725 0 274.767080745342 16.6194915685975 220.921 271.431677018634 19.4775077691171 235.643 0 0 chimp,cow,dog,elephant,human,macaque,marmoset,orangutan,panda,pig,rabbit,rat, lincRNA processed_transcript A549@1.52088,AG04450@1.02522,BJ@1.10051,GM12878@2.8747,H1HESC@3.42958,HELAS3@2.71019,HEPG2@3.74406,HMEC@0.183389,HSMM@1.46294,HUVEC@2.0581,K562@1.47959,MCF7@0.79275,NHEK@0.291015,NHLF@0.887828,SKNSHRA@1.80449, 0 0 0 0 ENSG00000231889.2 ENST00000449449.2 chr6:111804765-111897944 4 780 92393 exonic 9.18 0 0,1,1 1 0,0,0 14.3538461538462 21.3122855627591 0 47.3910256410256 32.1580530992608 220.921 50.6205128205128 32.9954650244066 235.643 0 0 chimp,cow,dog,elephant,guinea_pig,horse,human,macaque,marmoset,orangutan,panda, lincRNA processed_transcript A549@1.52088,AG04450@1.02522,BJ@1.10051,GM12878@2.8747,H1HESC@3.42958,HELAS3@2.71019,HEPG2@3.74406,HMEC@0.183389,HSMM@1.46294,HUVEC@2.0581,K562@1.47959,MCF7@0.79275,NHEK@0.291015,NHLF@0.887828,SKNSHRA@1.80449, 0 0 0 0 ENSG00000231889.2 ENST00000456352.2 chr6:111804815-111897956 3 481 92656 exonic 1.75 0 0,1,1 1 0,0,0 23.2765072765073 21.2517915731307 0 43.6507276507277 41.2422293213607 218.905 46.045738045738 42.1695842686928 233.346 0 0 chimp,cow,dog,human,macaque,marmoset,orangutan,rabbit, lincRNA processed_transcript A549@1.52088,AG04450@1.02522,BJ@1.10051,GM12878@2.8747,H1HESC@3.42958,HELAS3@2.71019,HEPG2@3.74406,HMEC@0.183389,HSMM@1.46294,HUVEC@2.0581,K562@1.47959,MCF7@0.79275,NHEK@0.291015,NHLF@0.887828,SKNSHRA@1.80449, 0 0 0 0 ENSG00000231889.2 ENST00000440001.2 chr6:111804868-111824814 3 912 19030 exonic 2.35 1 1,1,1 1 0,0,0 71.1074561403509 6.6750394114556 0 154.860745614035 14.8583289542827 216.389 127.811403508772 18.7236468733579 231.195 0 0 chimp,dog,guinea_pig,horse,human,macaque,marmoset,mouse,orangutan,panda,rat, lincRNA processed_transcript A549@1.52088,AG04450@1.02522,BJ@1.10051,GM12878@2.8747,H1HESC@3.42958,HELAS3@2.71019,HEPG2@3.74406,HMEC@0.183389,HSMM@1.46294,HUVEC@2.0581,K562@1.47959,MCF7@0.79275,NHEK@0.291015,NHLF@0.887828,SKNSHRA@1.80449, 0 0 0 0 ENSG00000231889.2 ENST00000440395.1 chr6:111805855-111897793 2 437 91499 intronic 1.75 0 0,0,0 0 0,0,0 0 21.4703220800227 16.1 0 32.2473469655406 53.784 2.22425629290618 33.2820358692445 37.024 0 0 cow,dog,guinea_pig,horse,human,marmoset, lincRNA processed_transcript A549@1.52088,AG04450@1.02522,BJ@1.10051,GM12878@2.8747,H1HESC@3.42958,HELAS3@2.71019,HEPG2@3.74406,HMEC@0.183389,HSMM@1.46294,HUVEC@2.0581,K562@1.47959,MCF7@0.79275,NHEK@0.291015,NHLF@0.887828,SKNSHRA@1.80449, 0 0 0 0 ENSG00000255389.1 ENST00000531702.1 chr6:111921078-111923498 1 2420 0 exonic -0.73 1 0,0,1 0 0,0,0 21.248347107438 0 0 61.6487603305785 0 2.868 67.4739669421488 0 3.012 0 0 cat,chimp,cow,elephant,horse,human,macaque,orangutan,panda,pig, antisense antisense A549@0.075239,AG04450@0.134954,BJ@0.0870335,GM12878@0.192674,H1HESC@0.205575,HELAS3@0.131233,HEPG2@0.254332,HMEC@0.003383,HSMM@0.187706,HUVEC@0.0969655,K562@0.180259,MCF7@0.160496,NHEK@0,NHLF@0.0641175,SKNSHRA@0.381203, 0 0 0 0 ENSG00000250729.1 ENST00000515699.1 chr6:112221562-112230481 3 1241 7674 intergenic -6.14 0 0,0,1 0 0,0,0 0 0 0 6.63336019339243 0 0 7.15229653505238 0 1.944 0 0 chimp,horse,human,macaque,marmoset,orangutan,pig, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0.0267185,HELAS3@0.0018165,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0.0342135,MCF7@0,NHEK@0.008415,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000227012.1 ENST00000449069.1 chr6:112221692-112223054 2 760 600 intergenic -0.04 0 0,0,0 0 0,0,0 0 0 0 10.8315789473684 0 0 11.6789473684211 0 0 0 0 chimp,elephant,guinea_pig,horse,human,macaque,marmoset,orangutan,pig,rabbit, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0.0069695,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000237234.1 ENST00000425503.1 chr6:112475967-112479534 4 540 3021 exonic -0.17 0 0,0,0 0 0,0,0 92.2592592592593 37.9275074478649 0 100.77962962963 52.4730221780867 14.992 104.32037037037 50.1648460774578 9.599 0 0 chimp,cow,dog,elephant,guinea_pig,horse,human,macaque,marmoset,orangutan,panda,pig,rabbit, antisense antisense A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0.026596,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000226440.1 ENST00000433684.1 chr6:112557797-112627885 3 533 69551 intronic 4.71 1 0,0,0 0 0,0,0 0 10.5334071400843 16.013 8.29831144465291 15.9345947578036 20.119 8.38461538461539 16.7406938793116 21.222 0 0 chimp,cow,dog,elephant,horse,human,macaque,marmoset,orangutan,panda,pig,rabbit, antisense antisense A549@0.0080995,AG04450@0,BJ@0.012075,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0.0042405, 0 0 0 0 ENSG00000232299.1 ENST00000446322.1 chr6:112797740-112802838 2 486 4610 intergenic -5.10 0 0,0,0 0 0,0,0 0 0 0 5.24691358024691 1.62516268980477 0 5.45267489711934 2.90802603036876 0 0 0 chimp,human,macaque,marmoset,orangutan, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000223811.1 ENST00000445974.1 chr6:113678205-113689146 3 504 10433 intergenic 0 0 0,0,1 0 0,0,0 0 15.2347359340554 0 5.21626984126984 17.1669701907409 1.736 5.4781746031746 18.1989839930988 5.035 0 0 chimp,human,marmoset,orangutan, lincRNA lincRNA A549@0,AG04450@0.0379785,BJ@0.164391,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0.016152,HSMM@0.016671,HUVEC@0.0117395,K562@0,MCF7@0,NHEK@0.0636163,NHLF@0.0880025,SKNSHRA@0.183698, 0 0 0 0 ENSG00000232316.1 ENST00000421737.1 chr6:113749742-113754623 2 522 4357 intergenic -2.69 0 0,1,0 0 0,0,0 34.5862068965517 3.01996786779894 173.366 44.4731800766284 7.17351388570117 191.011 44.0459770114943 5.77736974982786 180.163 0 0 chimp,dog,elephant,human,marmoset,orangutan,rabbit, lincRNA lincRNA A549@0.0136905,AG04450@0,BJ@0.113692,GM12878@0,H1HESC@0,HELAS3@0.056798,HEPG2@0,HMEC@0.039567,HSMM@0.0129485,HUVEC@0,K562@0,MCF7@0.107729,NHEK@0.151942,NHLF@0.025776,SKNSHRA@0.023233, 0 0 0 0 ENSG00000232316.1 ENST00000430728.1 chr6:113749753-113753843 2 509 3579 intergenic -1.01 0 0,0,0 0 0,0,0 0 0 117.318 0 0 148.834 0 0 132.587 0 0 chimp,cow,elephant,human,marmoset,orangutan,rabbit, lincRNA lincRNA A549@0.0136905,AG04450@0,BJ@0.113692,GM12878@0,H1HESC@0,HELAS3@0.056798,HEPG2@0,HMEC@0.039567,HSMM@0.0129485,HUVEC@0,K562@0,MCF7@0.107729,NHEK@0.151942,NHLF@0.025776,SKNSHRA@0.023233, 0 0 0 0 ENSG00000236347.1 ENST00000415883.1 chr6:113852320-113864995 3 594 12077 intergenic -9.39 0 0,1,0 0 0,0,0 0 0 43.575 2.65656565656566 3.78868924401755 40.329 7.4023569023569 4.60230189616627 35.147 0 0 human,macaque,marmoset,orangutan, lincRNA lincRNA A549@0,AG04450@0.015398,BJ@0.0040535,GM12878@0,H1HESC@0.0104245,HELAS3@0,HEPG2@0,HMEC@0.006859,HSMM@0,HUVEC@0,K562@0,MCF7@1.62153,NHEK@0.0108323,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000230943.1 ENST00000427157.1 chr6:113944737-113971276 3 324 26211 intergenic 0 0 0,1,1 0 0,0,0 0 3.49517378199992 0 9.81172839506173 11.4836900537942 0 10.0154320987654 13.490633703407 3.402 0 0 chimp,cow,dog,elephant,horse,human,macaque,marmoset,orangutan,pig, lincRNA lincRNA A549@0.0287685,AG04450@0.0050645,BJ@0.0069595,GM12878@1.75309,H1HESC@0,HELAS3@0.0325305,HEPG2@0.0450635,HMEC@0.051076,HSMM@0.004425,HUVEC@0,K562@0,MCF7@0.023419,NHEK@0.505073,NHLF@0,SKNSHRA@0.0448605, 0 0 0 0 ENSG00000230943.1 ENST00000452675.1 chr6:113944981-113953716 3 462 8269 intergenic -2.77 0 0,1,0 0 0,0,0 66.5627705627706 0 0 39.4047619047619 15.1685814487846 17.862 39.8073593073593 18.4460031442738 30.998 0 0 cat,chimp,cow,dog,elephant,guinea_pig,horse,human,macaque,marmoset,mouse,orangutan,panda, lincRNA lincRNA A549@0.0287685,AG04450@0.0050645,BJ@0.0069595,GM12878@1.75309,H1HESC@0,HELAS3@0.0325305,HEPG2@0.0450635,HMEC@0.051076,HSMM@0.004425,HUVEC@0,K562@0,MCF7@0.023419,NHEK@0.505073,NHLF@0,SKNSHRA@0.0448605, 0 0 0 0 ENSG00000231912.1 ENST00000456424.1 chr6:114113032-114158556 2 373 45149 intergenic -10.08 0 0,0,0 0 0,0,0 0 10.9108507386653 40.259 0 20.4651265808767 7.416 0 22.0492812686881 8.304 0 0 chimp,cow,dog,horse,human,macaque,marmoset,orangutan,panda,pig, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000227502.1 ENST00000434296.1 chr6:114191162-114191899 2 411 324 intergenic -3.77 0 0,0,1 0 0,0,0 0 0 0 5.43065693430657 0 0 5.67153284671533 16.5 0 0 0 chimp,cow,dog,guinea_pig,horse,human,macaque,marmoset,mouse,orangutan,panda,rabbit, lincRNA processed_transcript A549@0.458566,AG04450@0,BJ@0,GM12878@9.8287,H1HESC@0,HELAS3@0.0303205,HEPG2@3.17751,HMEC@0,HSMM@0.060177,HUVEC@0.0509925,K562@0,MCF7@0,NHEK@0,NHLF@0.004672,SKNSHRA@0, 0 0 0 0 ENSG00000175967.3 ENST00000314481.3 chr6:114225302-114242806 4 2251 15247 intergenic 3.39 0 0,0,0 0 0,0,0 9.70679697912039 2.14993113399357 0 16.5593069746779 1.4030956909556 11.384 20.5042203465127 2.3199317898603 21.357 0 0 chimp,horse,human,macaque,orangutan,panda, antisense antisense A549@0.035453,AG04450@0.0477005,BJ@0.358773,GM12878@0.172308,H1HESC@0.0139465,HELAS3@0.0296165,HEPG2@0.11753,HMEC@0.001816,HSMM@0.010109,HUVEC@0.384175,K562@0,MCF7@0.009888,NHEK@0.00396267,NHLF@0.07018,SKNSHRA@0.0274375, 0 0 0 0 ENSG00000226099.1 ENST00000451843.1 chr6:114260792-114261212 2 365 53 exonic 0 0 0,1,0 0 0,0,0 0 0 0 0 0 0 0 0 0 0 0 chimp,horse,human,marmoset,orangutan,panda, antisense antisense A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000228624.2 ENST00000519104.1 chr6:114290865-114661902 10 2006 369013 exonic 2.69 1 0,0,1 0 0,0,0 4.86839481555334 18.0443968098685 0 23.3354935194417 24.6869541181476 0 23.8659022931206 27.8781587640544 0 0 0 chimp,horse,human,macaque,orangutan, lincRNA processed_transcript A549@0.064604,AG04450@0.354587,BJ@0.371714,GM12878@0.382064,H1HESC@5.43375,HELAS3@0.153323,HEPG2@0.738274,HMEC@0.080518,HSMM@1.11081,HUVEC@0.538393,K562@0.193362,MCF7@0.757072,NHEK@0.20559,NHLF@0.200085,SKNSHRA@0.763377, 0 0 0 0 ENSG00000228624.2 ENST00000520554.1 chr6:114291118-114314627 3 565 22940 exonic 2.69 0 0,1,0 0 0,0,0 6.36814159292035 5.23997384481255 5.911 44.058407079646 7.2036181342633 11.04 40.6 8.27397558849172 10.856 0 0 chimp,elephant,horse,human,orangutan,pig, lincRNA processed_transcript A549@0.064604,AG04450@0.354587,BJ@0.371714,GM12878@0.382064,H1HESC@5.43375,HELAS3@0.153323,HEPG2@0.738274,HMEC@0.080518,HSMM@1.11081,HUVEC@0.538393,K562@0.193362,MCF7@0.757072,NHEK@0.20559,NHLF@0.200085,SKNSHRA@0.763377, 0 0 0 0 ENSG00000228624.2 ENST00000436876.2 chr6:114291270-114316808 4 587 24945 exonic 2.69 0 0,0,0 0 0,0,0 0 4.8188013629986 9.766 18.8262350936968 7.7832832230908 25.362 15.4054514480409 8.85103227099619 25.224 0 0 chimp,elephant,human,macaque,orangutan,pig, lincRNA processed_transcript A549@0.064604,AG04450@0.354587,BJ@0.371714,GM12878@0.382064,H1HESC@5.43375,HELAS3@0.153323,HEPG2@0.738274,HMEC@0.080518,HSMM@1.11081,HUVEC@0.538393,K562@0.193362,MCF7@0.757072,NHEK@0.20559,NHLF@0.200085,SKNSHRA@0.763377, 0 0 0 0 ENSG00000228624.2 ENST00000449620.2 chr6:114291399-114316966 4 559 25002 exonic 2.69 1 0,1,1 0 0,0,0 0 4.80781537477002 9.766 7.59391771019678 7.76553875689945 32.168 7.75491949910555 8.83085353171746 29.932 0 0 cat,chimp,horse,human,macaque,orangutan,pig,rabbit, lincRNA processed_transcript A549@0.064604,AG04450@0.354587,BJ@0.371714,GM12878@0.382064,H1HESC@5.43375,HELAS3@0.153323,HEPG2@0.738274,HMEC@0.080518,HSMM@1.11081,HUVEC@0.538393,K562@0.193362,MCF7@0.757072,NHEK@0.20559,NHLF@0.200085,SKNSHRA@0.763377, 0 0 0 0 ENSG00000228624.2 ENST00000521888.1 chr6:114292659-114314520 3 587 21270 intronic 2.69 0 0,1,1 0 0,0,0 23.4480408858603 0 106.069 26.4872231686542 2.3044193700047 97.913 25.8977853492334 3.24931828866949 103.112 0 0 chimp,horse,human,orangutan,pig, lincRNA processed_transcript A549@0.064604,AG04450@0.354587,BJ@0.371714,GM12878@0.382064,H1HESC@5.43375,HELAS3@0.153323,HEPG2@0.738274,HMEC@0.080518,HSMM@1.11081,HUVEC@0.538393,K562@0.193362,MCF7@0.757072,NHEK@0.20559,NHLF@0.200085,SKNSHRA@0.763377, 0 0 0 0 ENSG00000228624.2 ENST00000520891.1 chr6:114292660-114316979 4 599 23714 intronic 2.69 1 1,1,1 0 0,0,0 22.3572621035058 0 106.441 25.237061769616 3.28573838239015 98.344 24.669449081803 4.22100868685165 103.537 0 0 cat,chimp,cow,horse,human,macaque,orangutan,pig,rabbit, lincRNA processed_transcript A549@0.064604,AG04450@0.354587,BJ@0.371714,GM12878@0.382064,H1HESC@5.43375,HELAS3@0.153323,HEPG2@0.738274,HMEC@0.080518,HSMM@1.11081,HUVEC@0.538393,K562@0.193362,MCF7@0.757072,NHEK@0.20559,NHLF@0.200085,SKNSHRA@0.763377, 0 0 0 0 ENSG00000228624.2 ENST00000522844.1 chr6:114292682-114317033 4 804 23541 intronic 2.69 1 0,1,1 0 0,0,0 6.47761194029851 0 114.625 9.15298507462687 3.30988488169577 106.533 8.86442786069652 4.25202837602481 111.612 0 0 cat,chimp,human,macaque,marmoset,orangutan,rabbit, lincRNA processed_transcript A549@0.064604,AG04450@0.354587,BJ@0.371714,GM12878@0.382064,H1HESC@5.43375,HELAS3@0.153323,HEPG2@0.738274,HMEC@0.080518,HSMM@1.11081,HUVEC@0.538393,K562@0.193362,MCF7@0.757072,NHEK@0.20559,NHLF@0.200085,SKNSHRA@0.763377, 0 0 0 0 ENSG00000228624.2 ENST00000421891.2 chr6:114316308-114320962 3 828 3822 intronic 0.97 1 0,0,0 0 0,0,0 68.2608695652174 9.29434850863422 0 92.4963768115942 11.1072736787023 26.863 97.3888888888889 15.305599162742 28.864 0 0 chimp,cow,guinea_pig,horse,human,macaque,marmoset,orangutan,panda,pig,rabbit, lincRNA processed_transcript A549@0.064604,AG04450@0.354587,BJ@0.371714,GM12878@0.382064,H1HESC@5.43375,HELAS3@0.153323,HEPG2@0.738274,HMEC@0.080518,HSMM@1.11081,HUVEC@0.538393,K562@0.193362,MCF7@0.757072,NHEK@0.20559,NHLF@0.200085,SKNSHRA@0.763377, 0 0 0 0 ENSG00000228624.2 ENST00000519629.1 chr6:114316408-114317079 2 566 103 intronic -3.59 0 0,0,0 0 0,0,0 0 0 0 5.92756183745583 0 23.827 6.08657243816254 0 24.47 0 0 cat,chimp,cow,horse,human,macaque,marmoset,orangutan,panda,pig,rabbit, lincRNA processed_transcript A549@0.064604,AG04450@0.354587,BJ@0.371714,GM12878@0.382064,H1HESC@5.43375,HELAS3@0.153323,HEPG2@0.738274,HMEC@0.080518,HSMM@1.11081,HUVEC@0.538393,K562@0.193362,MCF7@0.757072,NHEK@0.20559,NHLF@0.200085,SKNSHRA@0.763377, 0 0 0 0 ENSG00000228624.2 ENST00000523087.1 chr6:114317119-114556880 4 489 239266 intronic 0.23 0 0,1,0 0 0,0,0 0 19.9085787366362 0 0 27.2034472093821 3.355 0 30.927060259293 3.445 0 0 chimp,horse,human,macaque,marmoset,orangutan,panda,pig,rabbit, lincRNA processed_transcript A549@0.064604,AG04450@0.354587,BJ@0.371714,GM12878@0.382064,H1HESC@5.43375,HELAS3@0.153323,HEPG2@0.738274,HMEC@0.080518,HSMM@1.11081,HUVEC@0.538393,K562@0.193362,MCF7@0.757072,NHEK@0.20559,NHLF@0.200085,SKNSHRA@0.763377, 0 0 0 0 ENSG00000228624.2 ENST00000519270.1 chr6:114317139-114380952 2 1242 62569 intronic -0.66 1 0,1,0 0 0,0,0 0 23.6822547907111 0 4.78019323671498 31.4114337771101 3.355 3.94122383252818 34.9101631798494 3.445 0 0 chimp,horse,human,macaque,marmoset,orangutan, lincRNA processed_transcript A549@0.064604,AG04450@0.354587,BJ@0.371714,GM12878@0.382064,H1HESC@5.43375,HELAS3@0.153323,HEPG2@0.738274,HMEC@0.080518,HSMM@1.11081,HUVEC@0.538393,K562@0.193362,MCF7@0.757072,NHEK@0.20559,NHLF@0.200085,SKNSHRA@0.763377, 0 0 0 0 ENSG00000228624.2 ENST00000520034.1 chr6:114405733-114465082 6 784 58555 intronic 5.00 0 0,1,1 0 0,0,0 0 14.829903509521 0 17.9566326530612 23.1638288788319 113.219 62.8558673469388 26.2052429339937 310.746 0 0 chimp,dog,human,macaque,marmoset,orangutan,pig, lincRNA processed_transcript A549@0.064604,AG04450@0.354587,BJ@0.371714,GM12878@0.382064,H1HESC@5.43375,HELAS3@0.153323,HEPG2@0.738274,HMEC@0.080518,HSMM@1.11081,HUVEC@0.538393,K562@0.193362,MCF7@0.757072,NHEK@0.20559,NHLF@0.200085,SKNSHRA@0.763377, 0 0 0 0 ENSG00000228624.2 ENST00000431399.2 chr6:114433550-114453467 4 442 19469 intronic -5.06 0 0,0,1 0 0,0,0 0 11.6552468026093 0 10.1990950226244 19.4499460681083 0 17.052036199095 22.1082746931019 0 0 0 cat,chimp,cow,elephant,horse,human,macaque,marmoset,orangutan,rabbit, lincRNA processed_transcript A549@0.064604,AG04450@0.354587,BJ@0.371714,GM12878@0.382064,H1HESC@5.43375,HELAS3@0.153323,HEPG2@0.738274,HMEC@0.080518,HSMM@1.11081,HUVEC@0.538393,K562@0.193362,MCF7@0.757072,NHEK@0.20559,NHLF@0.200085,SKNSHRA@0.763377, 0 0 0 0 ENSG00000228624.2 ENST00000451415.1 chr6:114551305-114560363 3 556 8498 intronic 3.52 0 0,1,1 0 0,0,0 0 10.8472581783949 0 0 9.42880677806543 15.805 6.55575539568345 10.5491880442457 4.24 0 0 chimp,elephant,horse,human,macaque,marmoset,orangutan,rabbit, lincRNA processed_transcript A549@0.064604,AG04450@0.354587,BJ@0.371714,GM12878@0.382064,H1HESC@5.43375,HELAS3@0.153323,HEPG2@0.738274,HMEC@0.080518,HSMM@1.11081,HUVEC@0.538393,K562@0.193362,MCF7@0.757072,NHEK@0.20559,NHLF@0.200085,SKNSHRA@0.763377, 0 0 0 0 ENSG00000228624.2 ENST00000518470.1 chr6:114602976-114789738 6 557 186195 intronic -0.44 0 0,0,0 0 0,0,0 0 22.0525524315905 16.491 35.8294434470377 27.6512527189237 38.037 46.9012567324955 32.3701066086629 46.374 0 0 chimp,cow,dog,elephant,guinea_pig,horse,human,macaque,marmoset,opossum,orangutan,pig,rabbit, lincRNA processed_transcript A549@0.064604,AG04450@0.354587,BJ@0.371714,GM12878@0.382064,H1HESC@5.43375,HELAS3@0.153323,HEPG2@0.738274,HMEC@0.080518,HSMM@1.11081,HUVEC@0.538393,K562@0.193362,MCF7@0.757072,NHEK@0.20559,NHLF@0.200085,SKNSHRA@0.763377, 0 0 0 0 ENSG00000228624.2 ENST00000522697.1 chr6:114746776-114792869 6 780 45303 intergenic -0.10 0 0,0,0 0 0,0,0 0 18.5523916738406 0 27.5384615384615 23.8121978676909 0 36.4615384615385 28.2636028519083 0 0 0 chimp,cow,dog,human,macaque,marmoset,orangutan,rabbit, lincRNA processed_transcript A549@0.064604,AG04450@0.354587,BJ@0.371714,GM12878@0.382064,H1HESC@5.43375,HELAS3@0.153323,HEPG2@0.738274,HMEC@0.080518,HSMM@1.11081,HUVEC@0.538393,K562@0.193362,MCF7@0.757072,NHEK@0.20559,NHLF@0.200085,SKNSHRA@0.763377, 0 0 0 0 ENSG00000228624.2 ENST00000517965.1 chr6:114770124-114777798 2 848 6824 intergenic 4.72 0 0,1,1 0 0,0,0 0 66.3987397420867 0 0 79.8478898007034 0 2.57900943396226 96.6393610785463 0 0 0 chimp,cow,dog,horse,human,macaque,marmoset,orangutan,panda,pig, lincRNA processed_transcript A549@0.064604,AG04450@0.354587,BJ@0.371714,GM12878@0.382064,H1HESC@5.43375,HELAS3@0.153323,HEPG2@0.738274,HMEC@0.080518,HSMM@1.11081,HUVEC@0.538393,K562@0.193362,MCF7@0.757072,NHEK@0.20559,NHLF@0.200085,SKNSHRA@0.763377, 0 0 0 0 ENSG00000232395.1 ENST00000438522.1 chr6:114798514-114809845 2 249 11080 intergenic -7.15 0 0,0,0 0 0,0,0 0 0 0 0 1.51083032490975 2.629 0 2.71913357400722 2.761 0 0 chimp,dog,human,macaque,marmoset,orangutan, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000232395.1 ENST00000446358.1 chr6:114802589-114809916 2 784 6541 intergenic -4.23 0 0,0,0 0 0,0,0 0 0 0 2.05357142857143 0 2.629 2.47959183673469 0 2.761 0 0 chimp,dog,guinea_pig,horse,human,macaque,marmoset,orangutan, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000226079.1 ENST00000435802.1 chr6:114844615-114857039 2 400 12022 intergenic -3.53 0 0,1,0 0 0,0,0 0 18.1558808850441 0 0 12.5406754283813 7.171 0 13.8108467809017 4.08 0 0 chimp,human,macaque,marmoset,orangutan,pig,rabbit,rat, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000228777.1 ENST00000446525.1 chr6:115954706-115955355 2 281 366 intergenic -11.16 0 0,0,0 0 0,0,0 0 0 0 0 0 10.137 0 0 11.586 0 0 chimp,elephant,horse,human,macaque,marmoset,orangutan, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000236326.1 ENST00000457319.1 chr6:116565350-116565891 2 419 120 exonic -8.83 0 0,1,1 0 0,0,0 0 0 0 0 0 14.092 0 0 10.548 0 0 cat,chimp,cow,dog,horse,human,macaque,marmoset,orangutan,panda,pig, antisense antisense A549@0.016873,AG04450@0,BJ@0.005848,GM12878@0.065021,H1HESC@0,HELAS3@0.0162855,HEPG2@0.010336,HMEC@0,HSMM@0,HUVEC@0,K562@0.0258965,MCF7@0,NHEK@0.00303233,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000244158.1 ENST00000476099.1 chr6:116781902-116784855 2 528 2423 exonic 0.72 0 0,1,0 0 0,0,0 0 24.5720181593066 7.7 8.77840909090909 43.2381345439538 5.618 7.01136363636364 60.5381758151053 7.399 0 0 chimp,cow,dog,elephant,horse,human,macaque,marmoset,orangutan,panda,pig, antisense antisense A549@0,AG04450@0,BJ@0,GM12878@0.022821,H1HESC@0,HELAS3@0.034455,HEPG2@0.03088,HMEC@0,HSMM@0,HUVEC@0.0045875,K562@0,MCF7@0.0153455,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000234117.1 ENST00000420595.1 chr6:116813460-116818255 3 740 4051 exonic -0.94 0 0,0,0 0 0,0,0 67.8121621621622 0 0 87.2635135135135 0 0 91.5918918918919 0.359911133053567 2.472 0 0 chimp,guinea_pig,human,macaque,marmoset,orangutan,rat, antisense antisense A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0.003041,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0.00724, 0 0 0 0 ENSG00000226181.1 ENST00000415736.1 chr6:117772293-117774688 2 306 2087 intergenic 0 0 0,1,0 0 0,0,0 0 0 0 6.48366013071895 2.86344034499281 0 6.56209150326797 4.23334930522281 0 0 0 cat,chimp,dog,elephant,horse,human,macaque,marmoset,orangutan,pig, antisense antisense A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000245439.1 ENST00000501802.1 chr6:117993976-117996447 3 1644 823 intergenic 0.46 0 1,1,1 1 0,0,0 0 0 177.66 0 0 304.138 0 0 299.426 1 1 chimp,human,macaque,marmoset,orangutan, lincRNA lincRNA A549@0.336962,AG04450@0.12099,BJ@0.0388895,GM12878@0.411224,H1HESC@0.717109,HELAS3@0.504597,HEPG2@0.44635,HMEC@0.186458,HSMM@0.214496,HUVEC@0.059577,K562@0.987556,MCF7@0.149139,NHEK@0.0706417,NHLF@0.0898395,SKNSHRA@0.0637995, 0 0 0 0 ENSG00000253194.1 ENST00000518570.1 chr6:119255950-119352706 3 468 96284 exonic 10.01 0 0,1,0 0 0,0,0 51.7264957264957 17.0578912384197 0 113.722222222222 27.3121598604129 0 157.955128205128 32.6668501516348 0 0 0 cat,chimp,dog,elephant,horse,human,macaque,marmoset,orangutan,panda,pig,rabbit,rat, antisense antisense A549@0.0046085,AG04450@0.011044,BJ@0.005227,GM12878@0.0410645,H1HESC@0.082643,HELAS3@0.0629095,HEPG2@0.0493,HMEC@0,HSMM@0.0174745,HUVEC@0.040112,K562@0.222326,MCF7@0.192979,NHEK@0.00271033,NHLF@0,SKNSHRA@0.014468, 0 0 0 0 ENSG00000234024.1 ENST00000450059.1 chr6:121711036-121712027 3 268 719 intergenic 2.91 0 0,0,0 0 0,0,0 0 0 0 0 0 0 0 0 0 0 0 chimp,elephant,guinea_pig,human,macaque,marmoset,orangutan, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000225504.2 ENST00000426074.1 chr6:123391444-123394062 1 2618 0 intergenic -3.89 0 0,0,0 0 0,0,0 0 0 0 5.15699006875477 0 0 8.29411764705882 0 0 0 0 chimp,cow,dog,elephant,guinea_pig,horse,human,macaque,orangutan,panda,pig, lincRNA lincRNA A549@0,AG04450@0,BJ@0.001848,GM12878@0,H1HESC@0.042143,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0.0007855,HUVEC@0,K562@0.003751,MCF7@0.0015525,NHEK@0,NHLF@0,SKNSHRA@0.23723, 0 0 0 0 ENSG00000240500.1 ENST00000451729.1 chr6:123392316-123393064 2 658 88 intergenic -3.67 0 0,0,0 0 0,0,0 0 0 0 0 0 0 0 0 4.518 0 0 cat,chimp,cow,elephant,horse,human,macaque,marmoset,orangutan,panda,pig,rabbit, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0.007095,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0.0041295,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0.0347265, 0 0 0 0 ENSG00000235535.1 ENST00000418467.1 chr6:123760757-123790075 2 295 29021 intronic -3.94 0 0,0,0 0 0,0,0 0 10.9475207608284 18.247 5.08474576271186 23.2422383791048 39.445 5.3728813559322 24.2775576306812 41.198 0 0 chimp,cow,elephant,horse,human,macaque,marmoset,orangutan,pig, antisense antisense A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0.0139245,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000235535.1 ENST00000427828.1 chr6:123760787-123790075 2 249 29037 intronic 0 0 0,0,0 0 0,0,0 0 10.9414884457761 18.247 6.02409638554217 23.2294314150911 39.445 6.36546184738956 24.2641801839033 41.198 0 0 chimp,human,macaque,marmoset,orangutan,pig, antisense antisense A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0.0139245,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000235535.1 ENST00000434768.1 chr6:123760787-123790075 3 376 28908 intronic 0 0 0,0,0 0 0,0,0 0 10.9903140999031 18.247 3.98936170212766 23.3330911858309 39.445 4.21542553191489 24.3724574512246 41.198 0 0 chimp,cow,elephant,horse,human,macaque,marmoset,orangutan,panda,rabbit, antisense antisense A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0.0139245,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000237321.1 ENST00000441521.1 chr6:124144385-124150430 2 647 5396 intronic -8.03 0 0,0,0 0 0,0,0 0 7.56319495922906 0 0 20.2079318013343 0 0 21.4334692364715 0 0 0 chimp,cow,horse,human,macaque,marmoset,orangutan, sense_intronic sense_intronic A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0.0093215,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0.005385,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000236548.1 ENST00000439075.1 chr6:125230239-125284185 7 4500 49434 exonic 2.60 0 0,1,0 1 0,0,0 43.9697777777778 13.0977464902699 233.516 31.6142222222222 13.412691669701 173.058 34.0251111111111 14.306691750617 164.143 0 0 chimp,human,macaque,orangutan, lincRNA processed_transcript A549@0.141176,AG04450@0.278625,BJ@0.215222,GM12878@0.087364,H1HESC@0.078001,HELAS3@0.077729,HEPG2@0.0123995,HMEC@0.112468,HSMM@0.12851,HUVEC@0.15907,K562@0.128591,MCF7@0,NHEK@0.142301,NHLF@0.132124,SKNSHRA@0.0005045, 0 0 0 0 ENSG00000229819.1 ENST00000431104.1 chr6:125329901-125330635 2 482 250 exonic 2.40 0 0,1,0 0 0,0,0 0 0 6.82 0 0 0 0 0 0 0 0 chimp,cow,dog,elephant,guinea_pig,horse,human,macaque,marmoset,orangutan,panda, antisense antisense A549@0,AG04450@0,BJ@0.029569,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000226409.1 ENST00000422227.1 chr6:125691357-125695470 3 818 3291 intergenic -4.52 0 0,0,1 0 0,0,0 10.9865525672372 0 0 28.9290953545232 6.31540565177758 1.673 40.0660146699267 7.44089942266788 1.701 0 0 cat,chimp,dog,horse,human,macaque,marmoset,orangutan,panda,pig, antisense antisense A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0.155766,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0.0502595,MCF7@0.074781,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000228704.1 ENST00000430672.1 chr6:125746773-125766329 3 278 19274 intergenic -6.28 0 0,0,1 0 0,0,0 0 15.9593234409048 0 3.66906474820144 16.1062571339629 65.267 8.93884892086331 17.5317007367438 65.227 0 0 chimp,elephant,horse,human,macaque,marmoset,orangutan, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000237742.1 ENST00000427852.1 chr6:125899713-126066174 5 471 165982 intergenic -0.47 0 0,0,1 0 0,0,0 0 16.5472581364244 95.832 21.5583864118896 22.0883650034341 60.382 22.1422505307856 23.6141750310275 61.831 0 0 chimp,human,orangutan, lincRNA processed_transcript A549@0,AG04450@0,BJ@0,GM12878@0.0050675,H1HESC@0.0713945,HELAS3@0.0151945,HEPG2@0.0352995,HMEC@0,HSMM@0,HUVEC@0.012922,K562@0.0097965,MCF7@0.14504,NHEK@0,NHLF@0,SKNSHRA@0.005133, 0 0 0 0 ENSG00000237742.1 ENST00000451660.1 chr6:125899713-126070332 5 703 169908 intronic 0 0 0,1,1 0 0,0,0 0 16.7289297737599 0 19.6073968705548 22.2681392282883 83.383 26.5504978662873 23.7638368999694 76.902 0 0 chimp,horse,human,orangutan, lincRNA processed_transcript A549@0,AG04450@0,BJ@0,GM12878@0.0050675,H1HESC@0.0713945,HELAS3@0.0151945,HEPG2@0.0352995,HMEC@0,HSMM@0,HUVEC@0.012922,K562@0.0097965,MCF7@0.14504,NHEK@0,NHLF@0,SKNSHRA@0.005133, 0 0 0 0 ENSG00000224506.1 ENST00000423208.1 chr6:125995499-126039244 4 839 42900 intergenic 1.63 0 0,0,0 0 0,0,0 29.0584028605483 16.3836363636364 94.98 16.6090584028605 18.3436363636364 70.836 20.818831942789 19.5642424242424 53.603 0 0 cat,chimp,cow,dog,elephant,horse,human,macaque,marmoset,orangutan,panda,pig, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0.229739,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0.0699195,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000237742.1 ENST00000432121.1 chr6:126041489-126070332 2 522 28319 intronic 0 0 0,1,0 0 0,0,0 0 20.0076980119354 0 25.7260536398467 21.7504855397436 83.383 34.8965517241379 23.4197888343515 76.902 0 0 chimp,horse,human,macaque,marmoset,orangutan, lincRNA processed_transcript A549@0,AG04450@0,BJ@0,GM12878@0.0050675,H1HESC@0.0713945,HELAS3@0.0151945,HEPG2@0.0352995,HMEC@0,HSMM@0,HUVEC@0.012922,K562@0.0097965,MCF7@0.14504,NHEK@0,NHLF@0,SKNSHRA@0.005133, 0 0 0 0 ENSG00000232131.1 ENST00000429007.1 chr6:126119002-126140004 3 498 20500 intronic -1.67 0 0,0,1 0 0,0,0 0 15.0240487804878 12.88 4.6425702811245 14.5607804878049 5.24 4.73895582329317 16.0380487804878 5.6 0 0 chimp,cow,dog,elephant,guinea_pig,horse,human,macaque,marmoset,orangutan,panda,pig, antisense antisense A549@0,AG04450@0,BJ@0,GM12878@0.0344865,H1HESC@0,HELAS3@0.0405905,HEPG2@0.0085055,HMEC@0,HSMM@0,HUVEC@0.105034,K562@0,MCF7@0.0203375,NHEK@0,NHLF@0,SKNSHRA@0.0055505, 0 0 0 0 ENSG00000231842.1 ENST00000444229.1 chr6:126498339-126523385 4 579 24461 intergenic 4.64 0 0,0,0 0 0,0,0 0 23.6049221209272 69.814 3.52331606217617 28.5756510363436 141.481 0 29.4106128122317 93.324 0 0 cat,chimp,cow,dog,elephant,horse,human,macaque,marmoset,orangutan,panda,pig,rabbit, lincRNA lincRNA A549@0.0525585,AG04450@0.079226,BJ@0.0138525,GM12878@0.693764,H1HESC@0.337991,HELAS3@0.11363,HEPG2@0.312075,HMEC@0,HSMM@0,HUVEC@0.138074,K562@0.311977,MCF7@0.0173205,NHEK@0.0324123,NHLF@0.013313,SKNSHRA@0.085877, 0 0 0 0 ENSG00000248650.2 ENST00000535629.1 chr6:126698801-127440994 10 3564 738611 intronic 3.85 0 0,0,0 0 0,0,0 63.1349607182941 20.9185755424709 38.67 88.4952300785634 26.6212038542616 39.793 94.6018518518519 29.3046732312408 46.449 0 0 chimp,cow,dog,elephant,guinea_pig,horse,human,macaque,marmoset,mouse,orangutan,panda,pig,rabbit, lincRNA lincRNA A549@0.011801,AG04450@0.000902,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0.022841,K562@0,MCF7@0,NHEK@0,NHLF@0.00108,SKNSHRA@0, 0 0 0 0 ENSG00000227945.1 ENST00000417390.1 chr6:128349031-128406393 5 747 56607 exonic 6.30 0 0,0,0 0 0,0,0 135.164658634538 17.0573780627838 0 236.204819277108 18.1193668627555 0 250.665327978581 19.7994594308125 4.769 0 0 cat,chimp,cow,dog,elephant,guinea_pig,horse,human,macaque,marmoset,mouse,opossum,orangutan,panda,pig,platypus,rabbit,rat, antisense antisense A549@0.0028865,AG04450@0.0120735,BJ@0.004758,GM12878@0.0431635,H1HESC@0,HELAS3@0.0111015,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0.002734,NHEK@0,NHLF@0,SKNSHRA@0.003017, 0 0 0 0 ENSG00000228972.1 ENST00000434560.1 chr6:128752086-128753913 1 1827 0 intronic -3.23 0 0,0,1 0 0,0,0 3.20306513409962 0 0 2.80623973727422 0 0 3.80733442802408 0 18.285 0 0 chimp,dog,elephant,horse,human,macaque,marmoset,orangutan,pig, sense_intronic sense_intronic A549@0.038931,AG04450@0.118043,BJ@0.0952875,GM12878@0.00315,H1HESC@0.0624145,HELAS3@0.0737775,HEPG2@0.152933,HMEC@0.001924,HSMM@0.0091585,HUVEC@0.125457,K562@0,MCF7@0.103466,NHEK@0.194865,NHLF@0,SKNSHRA@0.03151, 0 0 0 0 ENSG00000182404.5 ENST00000450483.1 chr6:128768789-128770446 1 1657 0 intronic -5.59 0 0,0,0 0 0,0,0 0 0 15.32 0.748340374170187 0 20.054 0.781532890766445 0 19.832 0 0 chimp,human,macaque,orangutan, sense_intronic sense_intronic A549@0.13182,AG04450@0.321564,BJ@0.240136,GM12878@0.001251,H1HESC@0.135946,HELAS3@0.148955,HEPG2@0.21036,HMEC@0,HSMM@0.0094005,HUVEC@0.181988,K562@0,MCF7@0.244856,NHEK@0.514091,NHLF@0.001125,SKNSHRA@0.0864305, 0 0 0 0 ENSG00000224733.1 ENST00000458367.1 chr6:128821672-128822321 2 547 100 intronic 0 0 0,0,0 0 0,0,0 0 0 30.744 0 0 0 0 0 0 0 0 chimp,human,macaque,marmoset,orangutan,panda, antisense antisense A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 1 96 0 0 ENSG00000227112.1 ENST00000411489.1 chr6:128826270-128827421 2 337 812 intronic 0 0 0,1,0 0 0,0,0 0 0 0 0 2.7487684729064 3.66 0 2.9371921182266 3.756 0 0 cat,chimp,guinea_pig,horse,human,macaque,marmoset,orangutan,panda,rabbit, antisense antisense A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0.01257,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000233351.1 ENST00000442449.1 chr6:129800760-129802555 2 389 1404 exonic -2.05 0 0,0,1 0 0,0,0 151.681233933162 35.1538461538462 12.276 143.275064267352 18.8782051282051 12.499 155.434447300771 36.5569800569801 15.531 0 0 cat,chimp,cow,dog,elephant,guinea_pig,horse,human,macaque,marmoset,opossum,orangutan,panda,pig,rabbit, antisense antisense A549@0.065425,AG04450@0.0653275,BJ@0.165046,GM12878@0.305098,H1HESC@0,HELAS3@0.198945,HEPG2@0.44828,HMEC@0.010472,HSMM@0.042099,HUVEC@1.23064,K562@0.0199765,MCF7@0.005142,NHEK@0.0649007,NHLF@0.0098695,SKNSHRA@0.269773, 0 0 0 0 ENSG00000226149.1 ENST00000430296.1 chr6:129847771-129873732 7 721 25228 intergenic 4.99 0 0,0,0 0 0,0,0 0 15.1297764388774 0 9.66158113730929 18.3700650071349 0 10.0235783633842 24.3934517203108 0 0 0 chimp,human,macaque,marmoset,orangutan, lincRNA lincRNA A549@0.078627,AG04450@0.214356,BJ@0.581944,GM12878@0.138458,H1HESC@0,HELAS3@0.228899,HEPG2@0.15525,HMEC@0,HSMM@0.032905,HUVEC@0.884,K562@0.0424295,MCF7@0,NHEK@0.164605,NHLF@0.0053605,SKNSHRA@0.301963, 0 0 0 0 ENSG00000226149.1 ENST00000419061.1 chr6:129860493-129867773 3 355 6921 intergenic 4.99 0 0,0,1 0 0,0,0 0 0 0 55.1577464788732 3.14102008380292 0 73.1014084507042 5.57867360208062 0 0 0 cat,chimp,cow,dog,elephant,horse,human,macaque,marmoset,orangutan,panda,pig,rabbit, lincRNA lincRNA A549@0.078627,AG04450@0.214356,BJ@0.581944,GM12878@0.138458,H1HESC@0,HELAS3@0.228899,HEPG2@0.15525,HMEC@0,HSMM@0.032905,HUVEC@0.884,K562@0.0424295,MCF7@0,NHEK@0.164605,NHLF@0.0053605,SKNSHRA@0.301963, 0 0 0 0 ENSG00000227678.1 ENST00000415964.1 chr6:130454555-130463972 2 452 8963 exonic -10.01 0 0,0,0 0 0,0,0 155.508849557522 79.2919781323218 0 181.91592920354 75.3642753542341 0 193.570796460177 74.8843021309829 0 0 0 cat,chimp,cow,horse,human,macaque,orangutan,pig,rat, antisense antisense A549@0.0074285,AG04450@0.0506215,BJ@0.0053305,GM12878@0.047293,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0.169685,NHLF@0.038632,SKNSHRA@0.55048, 0 0 0 0 ENSG00000229923.1 ENST00000454262.1 chr6:131018457-131018923 2 333 131 intergenic -3.24 0 0,0,0 0 0,0,0 0 0 0 3.72372372372372 0 3.315 11.9159159159159 0 6.604 0 0 chimp,horse,human,macaque,orangutan,panda, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000256162.1 ENST00000541421.1 chr6:131148546-131158273 2 2508 7217 intergenic 20.67 0 1,1,1 0 0,1,1 16.7464114832536 22.2239157544686 0 37.938995215311 11.6720243868643 10.906 50.6363636363636 12.7663849244839 11.424 0 0 cat,chimp,elephant,horse,human,macaque,mouse,orangutan,panda,rabbit,rat, lincRNA lincRNA A549@0.0147795,AG04450@0.0009385,BJ@0.002851,GM12878@0.00233,H1HESC@0,HELAS3@3.29438,HEPG2@13.3327,HMEC@0,HSMM@0,HUVEC@0.0276615,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0.003619, 0 0 0 0 ENSG00000236673.1 ENST00000454596.1 chr6:132223103-132241705 2 2303 16297 intergenic 9.13 0 0,0,0 0 0,0,0 0 2.5097870773762 0 0 5.87077376204209 0 0 6.30551635270295 0 0 0 NA lincRNA processed_transcript A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@27.0116,HELAS3@0.0176635,HEPG2@0.0166955,HMEC@0,HSMM@0.0058505,HUVEC@0.0100295,K562@0,MCF7@0,NHEK@0,NHLF@0.0008465,SKNSHRA@0, 0 0 0 0 ENSG00000236673.1 ENST00000421310.1 chr6:132223104-132228670 3 598 4964 intergenic 4.47 0 0,0,1 0 0,0,0 0 0 0 0 0 0 0 0 0 0 0 chimp,human, lincRNA processed_transcript A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@27.0116,HELAS3@0.0176635,HEPG2@0.0166955,HMEC@0,HSMM@0.0058505,HUVEC@0.0100295,K562@0,MCF7@0,NHEK@0,NHLF@0.0008465,SKNSHRA@0, 0 0 0 0 ENSG00000236673.1 ENST00000419695.1 chr6:132224788-132228670 2 710 3170 intergenic 4.78 0 0,0,1 0 0,0,0 0 0 0 0 0 0 0 0 0 0 0 chimp,human, lincRNA processed_transcript A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@27.0116,HELAS3@0.0176635,HEPG2@0.0166955,HMEC@0,HSMM@0.0058505,HUVEC@0.0100295,K562@0,MCF7@0,NHEK@0,NHLF@0.0008465,SKNSHRA@0, 23 4 0 0 ENSG00000227220.1 ENST00000435287.1 chr6:132272086-132398533 2 493 125952 exonic 3.02 0 0,1,0 0 0,0,0 0 26.7014973958333 243.363 69.2089249492901 26.7569550304878 377.299 72.1237322515213 333.613940231199 340.49 0 0 chimp,cow,dog,guinea_pig,horse,human,macaque,marmoset,mouse,orangutan,pig,rabbit, antisense antisense A549@0.01435,AG04450@0.130993,BJ@0.0245285,GM12878@0,H1HESC@0.102777,HELAS3@0.0084325,HEPG2@0.0480755,HMEC@0.008272,HSMM@0.069034,HUVEC@0.0120245,K562@0,MCF7@0.0164305,NHEK@0.002667,NHLF@0.0274175,SKNSHRA@0.277334, 0 0 0 0 ENSG00000236166.1 ENST00000430428.1 chr6:132406224-132420419 2 550 13643 intergenic -3.10 0 1,1,1 0 0,0,0 0 7.86806420875174 66.325 30.9509090909091 6.76126951550245 74.903 38.6690909090909 8.55075863079968 66.915 0 0 chimp,cow,dog,elephant,horse,human,macaque,marmoset,orangutan,panda,pig,rabbit,rat, lincRNA lincRNA A549@0.0245635,AG04450@0.0537795,BJ@0.029153,GM12878@0,H1HESC@0.054314,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0.004199,HUVEC@0.0379895,K562@0,MCF7@0.0158385,NHEK@0,NHLF@0.027697,SKNSHRA@0.059606, 0 0 0 0 ENSG00000236166.1 ENST00000440246.1 chr6:132411673-132420366 2 488 8203 intergenic -2.40 0 0,1,1 0 0,0,0 0 0 0 0 0.641228818724857 8.085 0 2.1859075947824 8.503 0 0 chimp,cow,dog,human,macaque,marmoset,orangutan,pig,rabbit, lincRNA lincRNA A549@0.0245635,AG04450@0.0537795,BJ@0.029153,GM12878@0,H1HESC@0.054314,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0.004199,HUVEC@0.0379895,K562@0,MCF7@0.0158385,NHEK@0,NHLF@0.027697,SKNSHRA@0.059606, 0 0 0 0 ENSG00000228495.1 ENST00000422700.1 chr6:132453055-132458073 4 1827 3185 intergenic -0.63 1 0,0,1 0 0,0,0 38.9704433497537 24.2464678178964 229.167 37.623973727422 39.1981161695447 203.907 38.4849480021894 47.0951334379906 234.103 0 0 chimp,human,marmoset,orangutan, lincRNA processed_transcript A549@0,AG04450@0.179667,BJ@0.106629,GM12878@0,H1HESC@0.0067885,HELAS3@0,HEPG2@0.0047525,HMEC@0,HSMM@0.239653,HUVEC@27.2497,K562@0,MCF7@0.0026985,NHEK@0,NHLF@0.070107,SKNSHRA@0.100295, 0 0 0 0 ENSG00000228495.1 ENST00000458028.1 chr6:132455118-132468198 2 1343 11735 intergenic 1.83 1 1,1,1 0 0,0,0 0 14.5191308052833 21.465 149.130305286672 29.411077971879 26.185 151.626209977662 29.764209629314 43.191 0 0 chimp,cow,dog,guinea_pig,horse,human,marmoset,orangutan,panda,pig, lincRNA processed_transcript A549@0,AG04450@0.179667,BJ@0.106629,GM12878@0,H1HESC@0.0067885,HELAS3@0,HEPG2@0.0047525,HMEC@0,HSMM@0.239653,HUVEC@27.2497,K562@0,MCF7@0.0026985,NHEK@0,NHLF@0.070107,SKNSHRA@0.100295, 0 0 0 0 ENSG00000228495.1 ENST00000443303.1 chr6:132455551-132490514 3 566 34393 intergenic -2.81 1 1,1,1 0 0,0,0 171.047703180212 22.2283604221789 21.465 87.7243816254417 26.6989503678074 22.22 51.3480565371025 28.0192481028116 28.502 0 0 chimp,cow,guinea_pig,human,macaque,marmoset,mouse,opossum,orangutan,pig,rabbit,rat, lincRNA processed_transcript A549@0,AG04450@0.179667,BJ@0.106629,GM12878@0,H1HESC@0.0067885,HELAS3@0,HEPG2@0.0047525,HMEC@0,HSMM@0.239653,HUVEC@27.2497,K562@0,MCF7@0.0026985,NHEK@0,NHLF@0.070107,SKNSHRA@0.100295, 0 0 0 0 ENSG00000228495.1 ENST00000436112.1 chr6:132481904-132490501 2 510 8085 intergenic -0.72 1 0,1,1 0 0,0,0 189.829411764706 53.6828695114409 0 97.356862745098 34.6205318491033 0 56.9862745098039 36.7167594310451 0 0 0 chimp,cow,dog,elephant,guinea_pig,horse,human,macaque,marmoset,mouse,opossum,orangutan,panda,pig,rabbit,rat, lincRNA processed_transcript A549@0,AG04450@0.179667,BJ@0.106629,GM12878@0,H1HESC@0.0067885,HELAS3@0,HEPG2@0.0047525,HMEC@0,HSMM@0.239653,HUVEC@27.2497,K562@0,MCF7@0.0026985,NHEK@0,NHLF@0.070107,SKNSHRA@0.100295, 0 0 0 0 ENSG00000228495.1 ENST00000447481.1 chr6:132481905-132485631 2 743 2981 intergenic -0.72 0 0,1,0 0 0,0,0 0 3.17343173431734 0 0 2.32505870513251 0 0 2.44179805434418 0 0 0 cat,chimp,cow,elephant,horse,human,macaque,marmoset,orangutan,panda, lincRNA processed_transcript A549@0,AG04450@0.179667,BJ@0.106629,GM12878@0,H1HESC@0.0067885,HELAS3@0,HEPG2@0.0047525,HMEC@0,HSMM@0.239653,HUVEC@27.2497,K562@0,MCF7@0.0026985,NHEK@0,NHLF@0.070107,SKNSHRA@0.100295, 0 0 0 0 ENSG00000234484.1 ENST00000430895.1 chr6:133073814-133075090 2 579 695 exonic -1.89 0 0,0,0 0 0,0,0 0 0 56.028 18.9067357512953 0 45.72 21.1796200345423 0 54.772 0 0 chimp,cow,human,macaque,orangutan, antisense antisense A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000231023.2 ENST00000457339.1 chr6:133409219-133427717 6 2509 15979 intergenic 6.97 0 0,0,1 0 0,0,0 28.5711438820247 15.2039551911884 0 39.6811478676764 18.4032167219476 0 42.0494220805102 19.4964641091432 0 0 0 chimp,cow,elephant,horse,human,macaque,marmoset,orangutan,panda,pig, lincRNA lincRNA A549@0.0045415,AG04450@0.0095405,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0.0278135,HMEC@0,HSMM@0,HUVEC@0,K562@0.002129,MCF7@0,NHEK@0.00152267,NHLF@0.000767,SKNSHRA@0.257715, 0 0 0 0 ENSG00000231023.2 ENST00000434443.1 chr6:133409267-133427337 4 782 17282 intergenic 3.75 0 0,0,1 0 0,0,0 0 18.2055896308298 0 0 22.776588357829 0 0 24.1312348107858 0 0 0 cat,chimp,cow,dog,elephant,horse,human,macaque,marmoset,orangutan,pig, lincRNA lincRNA A549@0.0045415,AG04450@0.0095405,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0.0278135,HMEC@0,HSMM@0,HUVEC@0,K562@0.002129,MCF7@0,NHEK@0.00152267,NHLF@0.000767,SKNSHRA@0.257715, 0 0 0 0 ENSG00000223542.1 ENST00000412954.1 chr6:133756215-133760602 2 629 3756 intronic -0.61 0 0,0,0 0 0,0,0 0 0 0 64.8267090620032 1.83333333333333 0 83.3036565977742 3.169595314164 0 0 0 chimp,cow,dog,guinea_pig,horse,human,macaque,marmoset,orangutan,panda,pig,rabbit, lincRNA processed_transcript A549@0.246948,AG04450@0.0074645,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000234567.1 ENST00000457081.1 chr6:133773995-133777743 3 314 3430 exonic -6.70 0 0,0,0 0 0,0,0 105.821656050955 5.67463556851312 149.988 124.5 22.0413994169096 171.453 140.773885350318 17.730029154519 182.426 0 0 chimp,cow,dog,elephant,horse,human,macaque,marmoset,mouse,opossum,orangutan,panda,pig,platypus,rabbit,rat, antisense antisense A549@0.0728225,AG04450@0.042423,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0.006155,SKNSHRA@0, 0 0 0 0 ENSG00000227954.1 ENST00000451017.1 chr6:133823390-133832866 4 749 8721 exonic 2.32 1 0,0,0 0 0,0,0 217.240320427236 51.2787524366472 12.159 120.022696929239 38.2973282880404 19.75 122.004005340454 46.4265565875473 19.589 0 0 cat,chimp,cow,dog,elephant,guinea_pig,horse,human,macaque,marmoset,mouse,orangutan,panda,pig,rabbit,rat, processed_transcript processed_transcript A549@0.446252,AG04450@0.0360205,BJ@0.013022,GM12878@0.0062255,H1HESC@0,HELAS3@0.0363565,HEPG2@0.0181125,HMEC@0,HSMM@0.005465,HUVEC@0,K562@0,MCF7@0,NHEK@0.00344867,NHLF@0.017937,SKNSHRA@0, 0 0 0 0 ENSG00000234554.1 ENST00000419627.1 chr6:134081323-134167089 3 241 85521 intergenic -3.13 0 0,1,0 0 0,0,0 82.0580912863071 17.5149612375908 30.056 66.5145228215768 22.2285988236807 23.467 81.9377593360996 23.2661100782264 30.675 0 0 chimp,cow,dog,elephant,horse,human,macaque,marmoset,orangutan,pig,rabbit, lincRNA processed_transcript A549@1.71259,AG04450@0.02849,BJ@0.029327,GM12878@0,H1HESC@0.040859,HELAS3@0.21943,HEPG2@0.089434,HMEC@0,HSMM@0.008433,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0.015816,SKNSHRA@0, 0 0 0 0 ENSG00000223586.1 ENST00000456347.1 chr6:134142285-134172426 3 810 29327 intergenic 1.07 0 0,0,0 0 0,0,0 4.12469135802469 17.7756333753879 69.71 0 18.4837521737648 78.85 0 21.3235925938555 73.714 0 0 chimp,dog,elephant,horse,human,macaque,marmoset,orangutan, lincRNA processed_transcript A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000223586.1 ENST00000412745.1 chr6:134158322-134172938 3 772 13840 intergenic -0.40 0 0,0,0 0 0,0,0 0 9.49436416184971 0 0 16.6755057803468 0 0 20.3041184971098 0 0 0 chimp,cow,dog,elephant,horse,human,macaque,marmoset,orangutan,panda, lincRNA processed_transcript A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000231971.1 ENST00000417483.1 chr6:134749378-134841723 5 1355 90982 intergenic -0.46 0 0,1,1 0 0,0,0 0 7.15363478490251 0 2.01328413284133 8.95384801389285 0 2.10258302583026 14.0368204699831 0 0 0 chimp,human,macaque,marmoset,orangutan, lincRNA lincRNA A549@0,AG04450@0.0303235,BJ@0.0071485,GM12878@0,H1HESC@0.00428,HELAS3@0.0130365,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0.001788,K562@0,MCF7@0,NHEK@0.0727737,NHLF@0.0568615,SKNSHRA@0.0357565, 0 0 0 0 ENSG00000236700.1 ENST00000431422.1 chr6:134758854-134825719 3 2066 64795 intergenic 5.71 0 0,0,1 0 0,0,0 103.225556631171 4.22162203873756 10.56 83.9380445304937 5.66366231962343 0 83.3349467570184 12.5776371633614 3.263 0 0 chimp,cow,dog,guinea_pig,horse,human,macaque,marmoset,orangutan, lincRNA lincRNA A549@0.0374125,AG04450@0.001551,BJ@0.0016745,GM12878@0.001622,H1HESC@0.002014,HELAS3@0.136335,HEPG2@0.0302035,HMEC@0.017811,HSMM@0,HUVEC@0,K562@0.006985,MCF7@0.001423,NHEK@0.0282033,NHLF@0.0054995,SKNSHRA@0, 0 0 0 0 ENSG00000231971.1 ENST00000422736.1 chr6:134768568-134775719 3 565 6582 intergenic -2.48 0 0,0,0 0 0,0,0 0 2.83226982680036 0 0 5.2988453357642 0 0 5.21315709510787 0 0 0 chimp,elephant,horse,human,macaque,marmoset,orangutan,panda,pig, lincRNA lincRNA A549@0,AG04450@0.0303235,BJ@0.0071485,GM12878@0,H1HESC@0.00428,HELAS3@0.0130365,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0.001788,K562@0,MCF7@0,NHEK@0.0727737,NHLF@0.0568615,SKNSHRA@0.0357565, 0 0 0 0 ENSG00000236700.1 ENST00000440090.1 chr6:134786115-134825157 3 1442 37596 intergenic 5.71 1 0,0,1 0 0,0,0 70.9708737864078 6.04824981380998 0 41.4750346740638 6.55082987551867 5.849 39.498613037448 14.387860410682 8.466 0 0 chimp,cow,dog,guinea_pig,horse,human,macaque,marmoset,orangutan,rat, lincRNA lincRNA A549@0.0374125,AG04450@0.001551,BJ@0.0016745,GM12878@0.001622,H1HESC@0.002014,HELAS3@0.136335,HEPG2@0.0302035,HMEC@0.017811,HSMM@0,HUVEC@0,K562@0.006985,MCF7@0.001423,NHEK@0.0282033,NHLF@0.0054995,SKNSHRA@0, 0 0 0 0 ENSG00000236700.1 ENST00000456749.1 chr6:134797768-134825157 2 1531 25856 intergenic 5.71 1 0,1,1 0 0,0,0 66.8451992161986 0.346921410891089 0 34.1652514696277 3.62128712871287 0 31.9294578706728 4.71120823019802 0 0 0 chimp,cow,dog,guinea_pig,horse,human,macaque,marmoset,orangutan,rat, lincRNA lincRNA A549@0.0374125,AG04450@0.001551,BJ@0.0016745,GM12878@0.001622,H1HESC@0.002014,HELAS3@0.136335,HEPG2@0.0302035,HMEC@0.017811,HSMM@0,HUVEC@0,K562@0.006985,MCF7@0.001423,NHEK@0.0282033,NHLF@0.0054995,SKNSHRA@0, 0 0 0 0 ENSG00000232310.1 ENST00000423028.1 chr6:134846463-134852144 2 382 5297 intergenic 0 1 0,0,1 0 0,0,0 0 32.3333962620351 10.794 0 27.4236360203889 19.85 0 30.3309420426657 30.842 0 0 chimp,dog,elephant,human,macaque,marmoset,panda, processed_transcript processed_transcript A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0.017716,HEPG2@0,HMEC@0.440677,HSMM@0.0085375,HUVEC@0.016719,K562@0.0045995,MCF7@0,NHEK@0.0540773,NHLF@0,SKNSHRA@0.040362, 0 0 0 0 ENSG00000232310.1 ENST00000418837.1 chr6:134846463-134861482 3 889 14126 intergenic 1.11 1 0,0,1 0 0,0,0 306.344206974128 17.810703666997 9.792 248.575928008999 16.1732266742178 13.16 229.199100112486 18.4172447968285 14.736 0 0 chimp,cow,dog,elephant,human,macaque,marmoset,panda,pig,rabbit, processed_transcript processed_transcript A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0.017716,HEPG2@0,HMEC@0.440677,HSMM@0.0085375,HUVEC@0.016719,K562@0.0045995,MCF7@0,NHEK@0.0540773,NHLF@0,SKNSHRA@0.040362, 0 0 0 0 ENSG00000232310.1 ENST00000434593.1 chr6:134846463-134980974 3 531 133976 intergenic 0 1 0,0,1 0 0,0,0 0 12.5264301068848 54.603 0 11.7659132979041 51.331 0 19.2662566429808 57.078 0 0 chimp,cow,dog,elephant,human,macaque,marmoset,orangutan,panda,rabbit, processed_transcript processed_transcript A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0.017716,HEPG2@0,HMEC@0.440677,HSMM@0.0085375,HUVEC@0.016719,K562@0.0045995,MCF7@0,NHEK@0.0540773,NHLF@0,SKNSHRA@0.040362, 0 0 0 0 ENSG00000229722.1 ENST00000412602.1 chr6:134927437-134930575 2 477 2659 intergenic 5.02 0 0,0,0 0 0,0,0 0 0 26.077 0 1.43813463708161 32.418 0 1.51034223392253 35.585 0 0 cat,chimp,dog,horse,human,macaque,marmoset,orangutan,panda,pig, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0.009395, 0 0 0 0 ENSG00000227723.1 ENST00000452888.1 chr6:134957627-134963633 3 367 5635 intergenic 6.72 1 0,0,0 0 0,0,0 1.59673024523161 6.19645075421473 21.824 77.0926430517711 15.527950310559 6.312 75.6811989100817 15.1723158828749 11.348 0 0 cat,chimp,cow,dog,guinea_pig,horse,human,macaque,marmoset,mouse,orangutan,panda,pig,rabbit, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0.0311563,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000236389.1 ENST00000447557.1 chr6:135027198-135028487 2 927 360 intergenic -0.99 0 0,0,0 0 0,0,0 0 0 0 0 4.64722222222222 11.586 0 4.88055555555556 12.971 0 0 cat,chimp,horse,human,macaque,marmoset,orangutan,panda,pig, lincRNA lincRNA A549@0.0066825,AG04450@0.0063735,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0.0704665, 0 0 0 0 ENSG00000240056.2 ENST00000416448.2 chr6:135262530-135263588 2 286 770 exonic -4.26 0 0,0,0 0 0,0,0 23.9160839160839 0 0 34.0384615384615 0 2.59 65.3461538461538 0 1.42 0 0 cat,chimp,cow,elephant,guinea_pig,horse,human,macaque,marmoset,orangutan,panda, antisense antisense A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000232876.1 ENST00000447508.1 chr6:135376171-135381688 2 788 4727 intronic 0 0 1,1,1 0 0,0,0 29.1370558375635 2.83900994288132 14.4 37.7106598984772 1.15422043579437 51.916 51.0939086294416 1.76327480431563 62.994 0 0 chimp,human,macaque,marmoset,orangutan, antisense antisense A549@0.0295645,AG04450@0.0243735,BJ@0.0185925,GM12878@0.486889,H1HESC@0.081379,HELAS3@0.0716485,HEPG2@0.0918255,HMEC@0.010366,HSMM@0.04342,HUVEC@0.0061555,K562@0.56571,MCF7@0.0623355,NHEK@0.0298683,NHLF@0.276024,SKNSHRA@0.060388, 0 0 0 0 ENSG00000236703.1 ENST00000455534.1 chr6:135516221-135517133 2 447 463 exonic 3.48 0 0,1,1 0 0,0,0 136 440.241900647948 69.138 258.702460850112 383.872570194384 71.325 352.212527964206 409.48596112311 75.646 0 0 cat,chimp,cow,dog,elephant,guinea_pig,horse,human,macaque,marmoset,mouse,opossum,orangutan,panda,pig,platypus,rabbit,rat, antisense antisense A549@0,AG04450@0,BJ@0,GM12878@0.020882,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0.012141,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000224374.1 ENST00000434255.1 chr6:135581134-135582071 2 214 721 intergenic -3.13 0 0,0,0 0 0,0,0 0 0 0 0 0 0 0 4.2371705963939 0 0 0 chimp,human, antisense antisense A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000234084.1 ENST00000444302.1 chr6:135622706-135628296 3 574 5012 intronic 0.44 0 0,0,1 0 0,0,0 0 14.4173982442139 0 0 32.2645650438947 3.576 0 30.7304469273743 10.095 0 0 cat,chimp,cow,elephant,human,macaque,marmoset,mouse,orangutan,rabbit, antisense antisense A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000231028.3 ENST00000536296.1 chr6:135818489-135839927 4 883 20549 exonic 13.07 0 0,1,0 0 0,0,0 0 1.16312229305562 0 11.6251415628539 2.48523042483819 3.14 11.8357870894677 3.06146284490729 7.544 0 0 chimp,cow,human,macaque,marmoset,orangutan,pig,rabbit, lincRNA processed_transcript A549@0.0282245,AG04450@0.0233135,BJ@0.032076,GM12878@0.009734,H1HESC@0.025475,HELAS3@0.183198,HEPG2@0.0345625,HMEC@0.004616,HSMM@0.0128445,HUVEC@0.01349,K562@0.135794,MCF7@0.062119,NHEK@0.0313047,NHLF@0.0161525,SKNSHRA@0.118102, 0 0 0 0 ENSG00000231028.3 ENST00000436554.1 chr6:135819094-135842287 4 651 22536 intronic -1.63 0 0,1,0 0 0,0,0 0 1.06056975505857 0 4.14746543778802 2.1596112886049 13.405 4.20276497695852 2.68503727369542 13.585 0 0 cat,chimp,cow,human,macaque,marmoset,orangutan,pig, lincRNA processed_transcript A549@0.0282245,AG04450@0.0233135,BJ@0.032076,GM12878@0.009734,H1HESC@0.025475,HELAS3@0.183198,HEPG2@0.0345625,HMEC@0.004616,HSMM@0.0128445,HUVEC@0.01349,K562@0.135794,MCF7@0.062119,NHEK@0.0313047,NHLF@0.0161525,SKNSHRA@0.118102, 0 0 0 0 ENSG00000233534.1 ENST00000416481.1 chr6:135950543-135951406 2 529 332 intergenic -3.00 0 0,1,0 0 0,0,0 0 0 65.946 3.61436672967864 11.5180722891566 53.568 17.0812854442344 12.0963855421687 47.646 0 0 cat,chimp,cow,dog,horse,human,macaque,marmoset,panda,pig,rabbit, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000233152.1 ENST00000438618.1 chr6:135956937-135964093 2 814 6340 intergenic 1.11 0 0,0,0 0 0,0,0 0 2.54258675078864 0 0 13.6406940063092 0 34.470515970516 106.533280757098 89.114 0 0 guinea_pig,human,macaque,orangutan,panda, lincRNA processed_transcript A549@0.0697325,AG04450@0.10742,BJ@0.0965605,GM12878@0.0135485,H1HESC@0.0249565,HELAS3@0.024803,HEPG2@0.0074005,HMEC@0,HSMM@0.037276,HUVEC@0.0454145,K562@0.0028455,MCF7@0.452161,NHEK@0.00441633,NHLF@0.051506,SKNSHRA@0.27044, 0 0 0 0 ENSG00000233152.1 ENST00000421378.1 chr6:135963330-136011127 3 585 47208 intergenic 0 0 0,1,1 0 0,0,0 0 12.3204541603118 16.12 0 14.6093246907304 79.191 0 14.6911540416878 64.892 0 0 human,macaque,marmoset,orangutan,panda,rabbit, lincRNA processed_transcript A549@0.0697325,AG04450@0.10742,BJ@0.0965605,GM12878@0.0135485,H1HESC@0.0249565,HELAS3@0.024803,HEPG2@0.0074005,HMEC@0,HSMM@0.037276,HUVEC@0.0454145,K562@0.0028455,MCF7@0.452161,NHEK@0.00441633,NHLF@0.051506,SKNSHRA@0.27044, 0 0 0 0 ENSG00000236378.1 ENST00000447848.1 chr6:136128286-136129604 2 775 541 intergenic -0.51 0 0,1,0 0 0,0,0 0 0 0 6.57290322580645 3.40110905730129 0 6.85161290322581 3.59334565619224 0 0 0 chimp,horse,human,macaque,marmoset,orangutan,panda, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000227844.1 ENST00000419926.1 chr6:136364990-136393965 4 1566 27403 intronic 0.74 1 0,0,0 0 0,0,0 30.8659003831418 18.6586505127176 23.808 89.3991060025543 22.137503193081 51.892 106.994252873563 25.4977557201766 58.766 0 0 chimp,cow,dog,elephant,guinea_pig,horse,human,macaque,marmoset,opossum,orangutan,panda,pig,rabbit,rat, antisense antisense A549@0.034633,AG04450@0.002496,BJ@0,GM12878@0,H1HESC@0,HELAS3@0.0028785,HEPG2@0.0213095,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0.002892,NHLF@0,SKNSHRA@0.018172, 0 0 0 0 ENSG00000227844.1 ENST00000413745.1 chr6:136365602-136385776 3 895 19275 intronic 0.47 0 0,0,0 0 0,0,0 0 9.69395590142672 0 48.3262569832402 17.3088456549935 3.972 176.911731843575 20.4155642023346 3.996 0 0 chimp,cow,dog,elephant,horse,human,macaque,marmoset,opossum,orangutan,panda,pig,rabbit, antisense antisense A549@0.034633,AG04450@0.002496,BJ@0,GM12878@0,H1HESC@0,HELAS3@0.0028785,HEPG2@0.0213095,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0.002892,NHLF@0,SKNSHRA@0.018172, 0 0 0 0 ENSG00000237596.1 ENST00000417643.1 chr6:136415853-136546733 8 726 130140 intronic -1.04 0 0,0,0 0 0,0,0 87.8292011019284 21.32918395574 0 90.0247933884298 23.2333102812356 4.536 81.2203856749311 27.6793145842939 4.604 0 0 cat,chimp,cow,guinea_pig,human,macaque,marmoset,orangutan, antisense antisense A549@0.206083,AG04450@0.0030535,BJ@0,GM12878@0.0027465,H1HESC@0.0186865,HELAS3@0.0398075,HEPG2@0.107413,HMEC@0,HSMM@0.0031055,HUVEC@0.009938,K562@0.0063265,MCF7@0.016807,NHEK@0.00358933,NHLF@0.010574,SKNSHRA@0.0462875, 0 0 0 0 ENSG00000234263.1 ENST00000432477.1 chr6:136950310-136969137 3 502 18321 intronic -0.98 0 0,0,1 0 0,0,0 0 14.3294579990175 16.191 3.58565737051793 12.6954860542547 19.674 3.63346613545817 14.7464112220949 24.816 0 0 chimp,human,macaque,marmoset,orangutan,rabbit, antisense antisense A549@0,AG04450@0.031969,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0.003821,SKNSHRA@0, 0 0 0 0 ENSG00000225391.1 ENST00000418699.1 chr6:137303302-137314371 3 1346 9719 intergenic -2.20 1 0,1,0 0 0,0,0 5.29717682020802 6.18067702438523 0 0.226597325408618 7.2463216380286 0 0.241456166419019 9.13386150838564 6.561 0 0 chimp,human,macaque,marmoset, lincRNA processed_transcript A549@0.002301,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0.005025,HEPG2@0,HMEC@0,HSMM@0.0050695,HUVEC@0,K562@0,MCF7@0,NHEK@0.004645,NHLF@0,SKNSHRA@0.45367, 0 0 0 0 ENSG00000225391.1 ENST00000432330.1 chr6:137303302-137314371 3 1354 9711 intergenic -2.20 1 0,1,0 0 0,0,0 5.2658788774003 6.1857687158892 0 2.02732644017725 7.0010297600659 0 2.1602658788774 8.8736484399135 6.561 0 0 chimp,human,macaque,marmoset, lincRNA processed_transcript A549@0.002301,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0.005025,HEPG2@0,HMEC@0,HSMM@0.0050695,HUVEC@0,K562@0,MCF7@0,NHEK@0.004645,NHLF@0,SKNSHRA@0.45367, 0 0 0 0 ENSG00000235399.1 ENST00000458017.1 chr6:137316307-137320641 2 382 3950 intergenic 3.75 0 0,0,0 0 0,0,0 0 8.67645569620253 0 0 1.96708860759494 14.192 0 5.11189873417722 14.534 0 0 chimp,human,macaque,marmoset,orangutan,rabbit, antisense antisense A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0.017746, 0 0 0 0 ENSG00000230533.1 ENST00000440397.1 chr6:137994597-137995691 3 520 570 intergenic 2.56 1 0,0,1 0 0,0,0 0 0 0 0 0 8.157 0 0 8.427 0 0 chimp,guinea_pig,human,macaque,marmoset,orangutan,pig,rabbit, lincRNA lincRNA A549@0.041192,AG04450@0,BJ@0,GM12878@0.813227,H1HESC@0,HELAS3@0.0089375,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0.0039315,NHEK@0.00993033,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000234956.1 ENST00000411615.1 chr6:138051307-138060120 3 734 8075 intergenic -5.76 1 0,0,1 0 0,0,0 0 3.01164086687307 0 0 6.48383900928792 0 4.58038147138965 7.41560371517028 0 0 0 chimp,human,macaque,marmoset,orangutan, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0.530678,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0.0387457,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000234956.1 ENST00000419220.1 chr6:138051307-138060120 2 701 8110 intergenic -5.76 1 0,0,1 0 0,0,0 0 2.99864364981504 0 0 6.45585696670777 0 4.79600570613409 7.38360049321825 0 0 0 chimp,human,macaque,marmoset,orangutan, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0.530678,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0.0387457,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000235842.1 ENST00000440578.1 chr6:138144810-138147031 2 1023 1196 intergenic -2.92 1 0,0,1 0 0,0,0 37.8064516129032 0 0 28.9530791788856 2.12959866220736 0 36.1652003910068 2.21989966555184 0 0 0 cat,chimp,dog,elephant,human,macaque,marmoset,opossum,orangutan,panda,rabbit, lincRNA processed_transcript A549@0.0042355,AG04450@0.0045955,BJ@0,GM12878@0.90172,H1HESC@0,HELAS3@0,HEPG2@0.125951,HMEC@0.087885,HSMM@0.0164925,HUVEC@0.0105515,K562@0.286982,MCF7@0,NHEK@21.5445,NHLF@0.0094125,SKNSHRA@0.004427, 0 0 0 0 ENSG00000237499.1 ENST00000448942.1 chr6:138178423-138188841 4 959 9453 exonic -3.66 0 0,1,0 1 0,0,0 0 1.06188511583624 47.539 3.66006256517205 14.4561514863006 58.432 3.76850886339937 16.7250608272506 54.828 0 0 chimp,dog,elephant,human,macaque,marmoset,orangutan,panda, lincRNA processed_transcript A549@0.0072615,AG04450@0.004655,BJ@0.0176775,GM12878@1.28577,H1HESC@0.056356,HELAS3@0.023625,HEPG2@0.457644,HMEC@0.029764,HSMM@0.0567865,HUVEC@0.002525,K562@1.17383,MCF7@0.059877,NHEK@0.0789003,NHLF@0.0930545,SKNSHRA@0.005935, 0 0 0 0 ENSG00000237499.1 ENST00000431144.1 chr6:138178837-138182628 2 775 3014 intergenic -3.66 0 0,1,1 0 0,0,0 0 3.33045786330458 0 3.08387096774194 3.56735235567352 0 3.23870967741935 7.53583278035833 0 0 0 chimp,horse,human,macaque,marmoset,orangutan, lincRNA processed_transcript A549@0.0072615,AG04450@0.004655,BJ@0.0176775,GM12878@1.28577,H1HESC@0.056356,HELAS3@0.023625,HEPG2@0.457644,HMEC@0.029764,HSMM@0.0567865,HUVEC@0.002525,K562@1.17383,MCF7@0.059877,NHEK@0.0789003,NHLF@0.0930545,SKNSHRA@0.005935, 0 0 0 0 ENSG00000226004.1 ENST00000417932.1 chr6:138264216-138266939 2 571 2150 intergenic -3.74 0 0,0,1 0 0,0,0 0 32.3711627906977 0 0 14.3502325581395 0 0 15.2562790697674 0 0 0 cat,chimp,cow,dog,elephant,guinea_pig,human,macaque,marmoset,mouse,orangutan,panda,pig, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0.0793145,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0.0470715,MCF7@0,NHEK@0,NHLF@0.0639805,SKNSHRA@0, 0 0 0 0 ENSG00000229922.1 ENST00000434437.1 chr6:138266503-138272711 2 533 5673 intergenic 1.34 0 0,1,1 0 0,0,0 11.4821763602251 28.6975145425701 63.172 4.71294559099437 16.6238321875551 28.341 4.69793621013133 18.9312533051296 30.297 0 0 chimp,human,macaque,orangutan, lincRNA lincRNA A549@0,AG04450@0,BJ@0.0181465,GM12878@0.216944,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0.031116,MCF7@0,NHEK@0.056023,NHLF@0.003647,SKNSHRA@0, 0 0 0 0 ENSG00000229922.1 ENST00000417800.1 chr6:138266503-138293659 2 379 26775 intergenic -1.61 1 0,1,1 0 0,0,0 16.1477572559367 8.38072829131653 63.172 9.78100263852243 7.97239962651727 28.341 9.91820580474934 10.2921008403361 30.297 0 0 cat,chimp,cow,elephant,human,macaque,marmoset,mouse,orangutan,panda,pig,rabbit, lincRNA lincRNA A549@0,AG04450@0,BJ@0.0181465,GM12878@0.216944,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0.031116,MCF7@0,NHEK@0.056023,NHLF@0.003647,SKNSHRA@0, 0 0 0 0 ENSG00000225177.1 ENST00000432673.1 chr6:139013685-139018425 3 914 3822 exonic 2.05 1 1,1,1 1 0,0,0 23.4781181619256 43.3503401360544 80.328 39.109409190372 50.2629513343799 67.511 49.1378555798687 52.3168498168498 90.256 0 0 cat,chimp,dog,horse,human,macaque,marmoset,orangutan,panda, antisense antisense A549@1.59451,AG04450@1.416,BJ@1.84109,GM12878@1.45371,H1HESC@3.04056,HELAS3@0.54166,HEPG2@2.71718,HMEC@1.19299,HSMM@1.09241,HUVEC@2.54223,K562@0.0058395,MCF7@1.5865,NHEK@1.68368,NHLF@0.698864,SKNSHRA@0.002474, 0 0 0 0 ENSG00000225177.1 ENST00000428044.1 chr6:139015456-139018164 3 418 2286 intergenic 0.14 0 0,1,1 0 0,0,0 0 0 445 10.4641148325359 2.41469816272966 14.159 10.7129186602871 2.43219597550306 39.729 0 0 chimp,human,macaque,marmoset,orangutan, antisense antisense A549@1.59451,AG04450@1.416,BJ@1.84109,GM12878@1.45371,H1HESC@3.04056,HELAS3@0.54166,HEPG2@2.71718,HMEC@1.19299,HSMM@1.09241,HUVEC@2.54223,K562@0.0058395,MCF7@1.5865,NHEK@1.68368,NHLF@0.698864,SKNSHRA@0.002474, 0 0 0 0 ENSG00000225177.1 ENST00000458733.1 chr6:139015527-139018425 3 700 2194 intergenic 0.18 1 0,0,1 0 0,0,0 0 0 0 6.24857142857143 2.51595259799453 14.159 6.39714285714286 2.53418413855971 39.729 0 0 chimp,horse,human,macaque,marmoset,orangutan, antisense antisense A549@1.59451,AG04450@1.416,BJ@1.84109,GM12878@1.45371,H1HESC@3.04056,HELAS3@0.54166,HEPG2@2.71718,HMEC@1.19299,HSMM@1.09241,HUVEC@2.54223,K562@0.0058395,MCF7@1.5865,NHEK@1.68368,NHLF@0.698864,SKNSHRA@0.002474, 0 0 0 0 ENSG00000225177.1 ENST00000447494.1 chr6:139017505-139018425 2 772 146 intergenic 0.18 1 0,0,1 0 0,0,0 0 0 0 1.48963730569948 0 5.52 1.57383419689119 0 5.56 0 0 cat,chimp,horse,human,macaque,marmoset,orangutan, antisense antisense A549@1.59451,AG04450@1.416,BJ@1.84109,GM12878@1.45371,H1HESC@3.04056,HELAS3@0.54166,HEPG2@2.71718,HMEC@1.19299,HSMM@1.09241,HUVEC@2.54223,K562@0.0058395,MCF7@1.5865,NHEK@1.68368,NHLF@0.698864,SKNSHRA@0.002474, 0 0 0 0 ENSG00000231329.1 ENST00000415194.1 chr6:139480299-139560442 3 474 79665 intronic -4.52 0 0,0,0 0 0,0,0 0 16.4549551245842 19.018 0 14.8659888282182 48.216 0 17.0806000125526 52.921 0 0 chimp,cow,guinea_pig,human,macaque,marmoset,orangutan,pig,rabbit, antisense antisense A549@0,AG04450@0.0062065,BJ@0,GM12878@0.009828,H1HESC@0.0540035,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0.0784365,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0.008181,SKNSHRA@0.0142695, 0 0 0 0 ENSG00000226571.1 ENST00000441249.1 chr6:139592499-139608444 4 910 15029 intronic 4.63 0 1,1,1 0 0,0,0 0 9.15037593984962 65.234 0 8.0640761195023 79.023 0 10.0326036329762 97.405 0 0 chimp,human,macaque,marmoset,orangutan, antisense antisense A549@0,AG04450@0,BJ@0,GM12878@0.0066165,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0.0067535,HUVEC@0.0114715,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000226571.1 ENST00000440518.1 chr6:139604244-139608444 3 413 3783 intronic 0.84 0 0,0,1 0 0,0,0 0 0 0 0 0.876288659793814 4.208 0 2.22627544277029 4.24 0 0 chimp,human,macaque,marmoset,orangutan, antisense antisense A549@0,AG04450@0,BJ@0,GM12878@0.0066165,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0.0067535,HUVEC@0.0114715,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000233567.1 ENST00000455535.1 chr6:139628819-139629359 2 489 49 intergenic 2.59 0 0,0,0 0 0,0,0 0 0 0 0 0 0 0 0 0 0 0 horse,human, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0.0060525,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000238099.1 ENST00000454788.1 chr6:139791301-139794192 3 487 2400 intergenic 4.15 0 0,0,0 0 0,0,0 20.7802874743326 13.3016666666667 196.311 33.4517453798768 13.6691666666667 132.432 46.4229979466119 19.23375 146.721 0 0 cat,chimp,guinea_pig,human,macaque,marmoset,orangutan, lincRNA lincRNA A549@0,AG04450@0.114715,BJ@0.024693,GM12878@0,H1HESC@0.038018,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0.080115,HUVEC@0,K562@0.0339915,MCF7@0,NHEK@0.0637113,NHLF@0.0317675,SKNSHRA@0.0092605, 0 0 0 0 ENSG00000231426.1 ENST00000414038.1 chr6:140175987-140180945 3 705 4249 intergenic 1.84 0 0,0,1 0 0,0,0 132.585815602837 48.3518474935279 0 112.768794326241 51.6199105671923 9.096 124.729078014184 58.1207342904213 9.536 0 0 chimp,cow,dog,elephant,guinea_pig,horse,human,macaque,marmoset,orangutan,panda,pig,rat, lincRNA lincRNA A549@0,AG04450@0.0033265,BJ@0.213951,GM12878@0.0028475,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0.0212565,MCF7@0,NHEK@0,NHLF@0.0277975,SKNSHRA@0.02677, 0 0 0 0 ENSG00000231426.1 ENST00000431609.1 chr6:140176056-140181288 3 953 4275 intergenic 0.72 0 0,0,0 0 0,0,0 98.0828961175236 48.0577777777778 0 83.4228751311647 51.3059649122807 9.096 92.2707240293809 57.7672514619883 9.536 0 0 cat,chimp,cow,dog,elephant,guinea_pig,horse,human,macaque,marmoset,mouse,orangutan,panda,pig,rat, lincRNA lincRNA A549@0,AG04450@0.0033265,BJ@0.213951,GM12878@0.0028475,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0.0212565,MCF7@0,NHEK@0,NHLF@0.0277975,SKNSHRA@0.02677, 0 0 0 0 ENSG00000225148.1 ENST00000445585.1 chr6:140177241-140198528 2 784 20501 intergenic -5.39 0 0,0,0 0 0,0,0 111.176020408163 15.3811033608117 39.96 84.4910714285714 16.2528169357592 73.16 110.15306122449 16.9375152431589 93.471 0 0 chimp,cow,dog,elephant,guinea_pig,horse,human,macaque,marmoset,mouse,opossum,orangutan,panda,pig,rabbit,rat, lincRNA lincRNA A549@0,AG04450@0.008205,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0.0256945,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000236013.1 ENST00000456896.1 chr6:140388572-140414858 3 1249 25033 intergenic 5.24 1 0,0,1 0 0,0,0 0 44.0874445731634 0 16.7477982385909 62.6185834698198 11.353 17.9039231385108 65.1188830743419 20.482 0 0 chimp,human,orangutan, lincRNA lincRNA A549@0,AG04450@0.0092235,BJ@0.117991,GM12878@0,H1HESC@0,HELAS3@0.0030955,HEPG2@0.0034035,HMEC@0,HSMM@0.107329,HUVEC@0,K562@0.029696,MCF7@0.005326,NHEK@0.0464973,NHLF@0.207354,SKNSHRA@0.00259, 0 0 0 0 ENSG00000236013.1 ENST00000418834.1 chr6:140404232-140409567 3 873 4458 intergenic 0.68 0 0,0,0 0 0,0,0 63.9862542955326 17.0210856886496 107.058 114.341351660939 32.2433826828174 129.967 100.164948453608 43.4125168236877 131.965 0 0 chimp,dog,elephant,guinea_pig,horse,human,macaque,marmoset,mouse,opossum,orangutan,panda,platypus,rabbit, lincRNA lincRNA A549@0,AG04450@0.0092235,BJ@0.117991,GM12878@0,H1HESC@0,HELAS3@0.0030955,HEPG2@0.0034035,HMEC@0,HSMM@0.107329,HUVEC@0,K562@0.029696,MCF7@0.005326,NHEK@0.0464973,NHLF@0.207354,SKNSHRA@0.00259, 0 0 0 0 ENSG00000236013.1 ENST00000446458.1 chr6:140407819-140414802 2 753 6228 intergenic -3.26 1 0,1,1 0 0,0,0 0 3.79640333975594 36.96 27.3572377158035 11.1832048811818 30.855 27.4634794156707 18.6669877970456 37.594 0 0 chimp,human,orangutan, lincRNA lincRNA A549@0,AG04450@0.0092235,BJ@0.117991,GM12878@0,H1HESC@0,HELAS3@0.0030955,HEPG2@0.0034035,HMEC@0,HSMM@0.107329,HUVEC@0,K562@0.029696,MCF7@0.005326,NHEK@0.0464973,NHLF@0.207354,SKNSHRA@0.00259, 0 0 0 0 ENSG00000234147.1 ENST00000455011.1 chr6:141167095-141174061 2 451 6513 intergenic -1.11 0 1,1,1 0 0,0,0 0 2.24735145094427 0 0 1.02548748656533 0 0 1.35283279594657 0 0 0 chimp,human,marmoset,orangutan, lincRNA lincRNA A549@0.0505285,AG04450@0.020293,BJ@0.0704675,GM12878@5.28969,H1HESC@0.0593685,HELAS3@6.50537,HEPG2@9.38377,HMEC@0.018078,HSMM@0.079044,HUVEC@0.0654355,K562@9.86543,MCF7@0.031067,NHEK@0.05226,NHLF@0.27739,SKNSHRA@2.27684, 0 0 0 0 ENSG00000236822.1 ENST00000454401.1 chr6:142409370-142410356 2 220 764 exonic 0 0 0,1,0 0 0,0,0 274.418181818182 101.073298429319 0 340.690909090909 132.354712041885 0.433 286.095454545455 143.163612565445 3.202 0 0 chimp,cow,dog,elephant,horse,human,marmoset,mouse,orangutan,pig,platypus, antisense antisense A549@0.0303835,AG04450@0,BJ@0,GM12878@0.0090805,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000203733.4 ENST00000450456.1 chr6:142454227-142456288 3 910 1147 intergenic -0.05 0 0,0,0 0 0,0,0 14.167032967033 8.94071490845684 13.145 269.084615384615 13.4106364428945 54.958 378.023076923077 17.3469921534438 64.482 0 0 cat,chimp,cow,dog,elephant,guinea_pig,horse,human,macaque,marmoset,mouse,opossum,orangutan,panda,platypus,rabbit,rat, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000203733.4 ENST00000546100.1 chr6:142454296-142456059 3 615 1144 intergenic -0.05 0 0,0,0 0 0,0,0 20.9626016260163 8.96416083916084 13.145 383.468292682927 15.6861888111888 60.008 528.373983739837 20.7045454545455 76.362 0 0 cat,chimp,cow,dog,elephant,guinea_pig,horse,human,macaque,marmoset,mouse,opossum,orangutan,panda,platypus,rabbit,rat, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000237494.1 ENST00000426166.1 chr6:142572984-142580769 2 347 7436 intergenic 0 0 0,0,1 0 0,0,0 0 9.37816030123722 0 0 4.9873587950511 0 0 9.49341043571813 0 0 0 chimp,elephant,horse,human,macaque,marmoset,orangutan,panda, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0.131562,HEPG2@0.211522,HMEC@0,HSMM@0,HUVEC@0.006967,K562@0,MCF7@0.324786,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000236366.1 ENST00000447311.1 chr6:142847592-142959026 3 2290 109140 intergenic -0.34 0 0,0,1 0 0,0,0 0 13.8049019607843 0 0 11.7595198827194 0 0 13.6548653106102 0 0 0 chimp,human,orangutan, lincRNA lincRNA A549@0.025722,AG04450@0.008876,BJ@0.0021105,GM12878@0,H1HESC@0.018094,HELAS3@0.0300675,HEPG2@0.011462,HMEC@0.007143,HSMM@0,HUVEC@0,K562@0.0084515,MCF7@0.0194485,NHEK@0.002227,NHLF@0.0280525,SKNSHRA@0.261362, 0 0 0 0 ENSG00000233138.1 ENST00000437067.1 chr6:143069580-143074896 2 347 4967 exonic 0 0 0,0,0 0 0,0,0 180.585014409222 263.495067445138 0 233.746397694524 259.156633782968 0 220.086455331412 239.61083148782 0 0 0 cat,chimp,cow,dog,elephant,guinea_pig,horse,human,macaque,marmoset,mouse,opossum,orangutan,panda,pig,platypus,rabbit,rat, antisense antisense A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0.060836,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000237851.1 ENST00000454411.1 chr6:143109260-143115223 2 442 5519 intronic -7.29 0 0,0,0 0 0,0,0 0 1.66624388476173 0 0 6.17521290088784 0 0 10.1913390106903 0 0 0 chimp,elephant,human,macaque,marmoset,orangutan, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000224460.1 ENST00000421237.1 chr6:143267184-143277835 2 400 10249 intergenic -7.49 0 0,0,1 0 0,0,0 191.26 50.1004000390282 0 213.525 62.4850229290663 0 225.935 685.165089277003 0 0 0 cat,dog,elephant,horse,human,macaque,panda,pig, lincRNA lincRNA A549@0.0292325,AG04450@0.099886,BJ@0.127914,GM12878@0.087025,H1HESC@0.0723595,HELAS3@0.281227,HEPG2@0.650927,HMEC@0.097269,HSMM@0.058645,HUVEC@0.089771,K562@0.0061095,MCF7@0.025275,NHEK@0.12571,NHLF@0.067982,SKNSHRA@0.270811, 0 0 0 0 ENSG00000232618.1 ENST00000417650.1 chr6:143271348-143277783 3 551 5880 intergenic -3.60 0 0,1,1 0 0,0,0 70.3974591651543 36.4979591836735 0 59.2014519056261 34.4809523809524 0 60.3194192377495 35.4498299319728 0 0 0 cat,chimp,dog,elephant,horse,human,macaque,marmoset,orangutan,pig, lincRNA lincRNA A549@0.0666715,AG04450@0.1675,BJ@0.121673,GM12878@0.89766,H1HESC@0.185435,HELAS3@0.131409,HEPG2@0.171326,HMEC@0.251295,HSMM@0.007428,HUVEC@0.01897,K562@0.028355,MCF7@0.0219385,NHEK@0.404556,NHLF@0.021054,SKNSHRA@0.476739, 0 0 0 0 ENSG00000229017.1 ENST00000419957.1 chr6:143287561-143358719 3 1897 69257 intergenic -0.25 0 0,0,0 0 0,0,0 0 6.25448691107036 0 1.3863995782815 8.92901800540018 0 3.09910384818134 9.68637105274558 0 0 0 chimp,dog,elephant,horse,human,macaque,marmoset, antisense antisense A549@0.005004,AG04450@0.0097365,BJ@0.037973,GM12878@0.0274625,H1HESC@0.0015315,HELAS3@0.144873,HEPG2@0.480366,HMEC@0.008881,HSMM@0.004309,HUVEC@0,K562@0.0543275,MCF7@0.0079445,NHEK@0.017719,NHLF@0.0020425,SKNSHRA@0.0286945, 0 0 0 0 ENSG00000229017.1 ENST00000446115.1 chr6:143288170-143343090 3 780 54136 intergenic -1.48 0 0,0,0 0 0,0,0 0 6.66187010492094 0 0 10.051906310034 0 0 10.8199719225654 0 0 0 cat,chimp,human,macaque,marmoset,orangutan,panda,pig, antisense antisense A549@0.005004,AG04450@0.0097365,BJ@0.037973,GM12878@0.0274625,H1HESC@0.0015315,HELAS3@0.144873,HEPG2@0.480366,HMEC@0.008881,HSMM@0.004309,HUVEC@0,K562@0.0543275,MCF7@0.0079445,NHEK@0.017719,NHLF@0.0020425,SKNSHRA@0.0286945, 0 0 0 0 ENSG00000227192.1 ENST00000454588.1 chr6:143360562-143363461 2 550 2347 intergenic 0 0 0,0,1 0 0,0,0 0 0 0 0 0 0 0 0 4.131 0 0 chimp,human,macaque,marmoset,orangutan, antisense antisense A549@0.0352925,AG04450@0.070709,BJ@0.146292,GM12878@0.168323,H1HESC@0.010656,HELAS3@0.342666,HEPG2@1.17523,HMEC@0.044507,HSMM@0.0372755,HUVEC@0.025326,K562@0.0317065,MCF7@0.0666325,NHEK@0.284477,NHLF@0.0386075,SKNSHRA@0.244486, 0 0 0 0 ENSG00000225752.1 ENST00000423500.1 chr6:143415171-143420782 2 453 5156 intronic -2.26 0 0,1,1 0 0,0,0 0 1.62141194724593 0 30.2869757174393 1.66427463149728 51.508 31.6114790286976 1.72653219550039 60.84 0 0 chimp,human,macaque,marmoset,orangutan, antisense antisense A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000229036.1 ENST00000415586.1 chr6:143824531-143827475 3 699 2241 exonic -2.81 0 0,0,0 0 0,0,0 69.1845493562232 27.3342257920571 82.716 41.4978540772532 11.3627844712182 57.033 92.2074391988555 19.4886211512718 68.933 0 0 cat,chimp,elephant,guinea_pig,horse,human,macaque,marmoset,orangutan,panda,pig, antisense antisense A549@0.0549385,AG04450@0.068267,BJ@0.0668995,GM12878@0.256532,H1HESC@0,HELAS3@0.09138,HEPG2@0.124324,HMEC@0.017498,HSMM@0.006178,HUVEC@0.0748875,K562@0.092039,MCF7@0.039885,NHEK@0.036041,NHLF@0.008246,SKNSHRA@0.049718, 0 0 0 0 ENSG00000235740.1 ENST00000450575.1 chr6:143875462-143883168 5 1694 6004 intronic 4.13 0 0,1,0 0 0,0,0 25.1050767414404 14.9073950699534 0 12.2508854781582 6.44653564290473 0 13.086186540732 7.56029313790806 0 0 0 chimp,human,macaque,marmoset,orangutan,rabbit, antisense antisense A549@0,AG04450@0,BJ@0,GM12878@0.011416,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0.001807,NHEK@0,NHLF@0,SKNSHRA@0.0026755, 0 0 0 0 ENSG00000246840.1 ENST00000500702.1 chr6:144324037-144329867 2 4989 839 exonic 13.53 0 0,1,0 0 0,0,0 15.4437763078773 0 0 40.7783122870315 0 0 43.7500501102425 0 0 0 0 chimp,horse,human,macaque,marmoset,orangutan,pig, lincRNA lincRNA A549@0.0089225,AG04450@0.008273,BJ@0.028264,GM12878@0.004108,H1HESC@0,HELAS3@0.0080535,HEPG2@0,HMEC@0,HSMM@0.0022895,HUVEC@0.002801,K562@0.0084985,MCF7@0,NHEK@0.00184767,NHLF@0,SKNSHRA@0.004179, 0 0 0 0 ENSG00000225311.1 ENST00000431309.1 chr6:144632835-144654437 2 499 21101 intronic 0 0 0,0,0 0 0,0,0 0 9.05127719065447 20.51 11.2084168336673 7.78332780436946 33.55 11.6432865731463 9.14842898440832 30.061 0 0 cat,chimp,cow,dog,elephant,guinea_pig,horse,human,macaque,marmoset,orangutan,panda,pig,rabbit, antisense antisense A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000235652.1 ENST00000452617.1 chr6:146136377-146204575 4 588 67604 intronic -0.87 0 0,0,0 0 0,0,0 0 2.86416484231702 16.28 0 3.25982190402935 37.899 0 5.99301816460564 31.075 0 0 chimp,cow,human,macaque,marmoset,orangutan, lincRNA processed_transcript A549@0.11803,AG04450@0.289744,BJ@0.534222,GM12878@0.322449,H1HESC@0.117584,HELAS3@0.196898,HEPG2@0.157689,HMEC@0.02075,HSMM@0.166254,HUVEC@0.118054,K562@0.0960165,MCF7@0.013738,NHEK@0.0439327,NHLF@0.276193,SKNSHRA@0.649478, 0 0 0 0 ENSG00000237468.1 ENST00000419168.1 chr6:146917094-146920067 3 745 2224 intergenic 4.62 0 0,1,0 0 0,0,0 0 0 18.368 9.95704697986577 0 25.666 9.74228187919463 0 33.66 0 0 cat,chimp,dog,elephant,human,macaque,marmoset,orangutan,pig,rabbit, lincRNA processed_transcript A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0.0111525, 0 0 0 0 ENSG00000233452.1 ENST00000427394.1 chr6:147163702-147525676 11 1810 360144 exonic 2.47 0 1,1,1 0 0,0,0 2.23756906077348 8.58195610644631 98.591 17.6364640883978 12.5896280376738 132.154 29.192817679558 13.6813274690124 138.158 0 0 chimp,human,macaque,marmoset,orangutan, lincRNA processed_transcript A549@0.071665,AG04450@0.269678,BJ@0.36158,GM12878@0.108041,H1HESC@0.028065,HELAS3@0.13341,HEPG2@0.203321,HMEC@0.333742,HSMM@0.74992,HUVEC@0.256263,K562@0.625671,MCF7@0.202922,NHEK@0.190395,NHLF@0.319852,SKNSHRA@0.347259, 0 0 0 0 ENSG00000233452.1 ENST00000367477.3 chr6:147164250-147525750 11 2916 358564 exonic 1.92 0 0,1,0 0 0,0,0 11.6666666666667 8.619772202452 68.621 26.0720164609054 12.6451038029473 88.05 35.5799039780521 13.7416137704845 87.246 0 0 chimp,human,macaque,marmoset,orangutan, lincRNA processed_transcript A549@0.071665,AG04450@0.269678,BJ@0.36158,GM12878@0.108041,H1HESC@0.028065,HELAS3@0.13341,HEPG2@0.203321,HMEC@0.333742,HSMM@0.74992,HUVEC@0.256263,K562@0.625671,MCF7@0.202922,NHEK@0.190395,NHLF@0.319852,SKNSHRA@0.347259, 0 0 0 0 ENSG00000233452.1 ENST00000433308.1 chr6:147171295-147172141 2 617 227 intergenic 0 1 0,0,1 0 0,0,0 0 0 0 0 0 0 0 0 0 0 0 cat,chimp,cow,dog,horse,human,macaque,marmoset,orangutan,panda, lincRNA processed_transcript A549@0.071665,AG04450@0.269678,BJ@0.36158,GM12878@0.108041,H1HESC@0.028065,HELAS3@0.13341,HEPG2@0.203321,HMEC@0.333742,HSMM@0.74992,HUVEC@0.256263,K562@0.625671,MCF7@0.202922,NHEK@0.190395,NHLF@0.319852,SKNSHRA@0.347259, 0 0 0 0 ENSG00000227748.1 ENST00000436295.1 chr6:147180317-147184217 3 452 3444 intergenic 1.67 0 0,1,0 0 0,0,0 11.7256637168142 7.54065040650407 0 22.2300884955752 14.8818234610918 0 22.7256637168142 17.8789198606272 0 0 0 cat,chimp,cow,dog,elephant,guinea_pig,horse,human,macaque,marmoset,orangutan,pig, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0.0366955,HEPG2@0,HMEC@0,HSMM@0.0090445,HUVEC@0,K562@2.56538,MCF7@0,NHEK@0.0255383,NHLF@0,SKNSHRA@0.0472915, 0 0 0 0 ENSG00000233452.1 ENST00000447072.1 chr6:147181793-147453054 5 342 270911 intergenic 1.92 0 0,0,0 0 0,0,0 80.4327485380117 9.60891215196135 108.445 168.111111111111 13.7406565255748 145.662 162.96783625731 15.302885449465 118.928 0 0 cat,chimp,cow,dog,elephant,guinea_pig,horse,human,macaque,marmoset,mouse,orangutan,panda,pig,rabbit,rat, lincRNA processed_transcript A549@0.071665,AG04450@0.269678,BJ@0.36158,GM12878@0.108041,H1HESC@0.028065,HELAS3@0.13341,HEPG2@0.203321,HMEC@0.333742,HSMM@0.74992,HUVEC@0.256263,K562@0.625671,MCF7@0.202922,NHEK@0.190395,NHLF@0.319852,SKNSHRA@0.347259, 0 0 0 0 ENSG00000233452.1 ENST00000458125.1 chr6:147182942-147440599 6 560 257087 intergenic -0.83 0 0,0,1 0 0,0,0 56.3125 8.93196466565793 0 136.239285714286 13.1385289804619 13.835 160.055357142857 14.7559580997872 14.755 0 0 cat,chimp,cow,dog,elephant,guinea_pig,horse,human,macaque,marmoset,mouse,orangutan,pig,rabbit,rat, lincRNA processed_transcript A549@0.071665,AG04450@0.269678,BJ@0.36158,GM12878@0.108041,H1HESC@0.028065,HELAS3@0.13341,HEPG2@0.203321,HMEC@0.333742,HSMM@0.74992,HUVEC@0.256263,K562@0.625671,MCF7@0.202922,NHEK@0.190395,NHLF@0.319852,SKNSHRA@0.347259, 0 0 0 0 ENSG00000233452.1 ENST00000443712.1 chr6:147185595-147232742 4 513 46628 intergenic -2.27 0 0,0,1 0 0,0,0 23.6881091617934 6.367954876898 0 56.1715399610136 11.3381015698722 0 50.2417153996101 12.755404477996 0 0 0 cat,chimp,cow,dog,elephant,guinea_pig,horse,human,macaque,marmoset,orangutan,panda,pig,rabbit, lincRNA processed_transcript A549@0.071665,AG04450@0.269678,BJ@0.36158,GM12878@0.108041,H1HESC@0.028065,HELAS3@0.13341,HEPG2@0.203321,HMEC@0.333742,HSMM@0.74992,HUVEC@0.256263,K562@0.625671,MCF7@0.202922,NHEK@0.190395,NHLF@0.319852,SKNSHRA@0.347259, 0 0 0 0 ENSG00000233452.1 ENST00000431143.1 chr6:147232962-147453122 7 637 219511 intergenic -0.83 0 0,0,0 0 0,0,0 99.6546310832025 10.3072192281936 72.473 170.8147566719 14.1219437750272 98.13 161.839874411303 15.7144881122131 75.408 0 0 cat,chimp,cow,dog,elephant,guinea_pig,horse,human,macaque,marmoset,mouse,opossum,orangutan,panda,pig,rabbit,rat, lincRNA processed_transcript A549@0.071665,AG04450@0.269678,BJ@0.36158,GM12878@0.108041,H1HESC@0.028065,HELAS3@0.13341,HEPG2@0.203321,HMEC@0.333742,HSMM@0.74992,HUVEC@0.256263,K562@0.625671,MCF7@0.202922,NHEK@0.190395,NHLF@0.319852,SKNSHRA@0.347259, 0 0 0 0 ENSG00000233452.1 ENST00000417502.1 chr6:147440553-147523603 5 414 82628 intergenic -0.58 0 0,1,0 0 0,0,0 0 8.03359635958755 0 2.9951690821256 11.0540252698843 15.326 4.85024154589372 11.6006438495425 20.549 0 0 cat,chimp,cow,dog,horse,human,macaque,marmoset,mouse,orangutan,pig,rabbit, lincRNA processed_transcript A549@0.071665,AG04450@0.269678,BJ@0.36158,GM12878@0.108041,H1HESC@0.028065,HELAS3@0.13341,HEPG2@0.203321,HMEC@0.333742,HSMM@0.74992,HUVEC@0.256263,K562@0.625671,MCF7@0.202922,NHEK@0.190395,NHLF@0.319852,SKNSHRA@0.347259, 0 0 0 0 ENSG00000196634.3 ENST00000359838.3 chr6:147480061-147502128 3 450 21613 intergenic 2.71 0 0,0,1 0 0,0,0 0 4.70129088974229 0 0 5.34826261971961 13.154 0 6.74015638735946 17.416 0 0 chimp,human,macaque,marmoset,orangutan, lincRNA lincRNA A549@0.0182925,AG04450@0,BJ@0.005435,GM12878@0.011724,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0.009039,HSMM@0,HUVEC@0,K562@0.028299,MCF7@0.004438,NHEK@0,NHLF@0,SKNSHRA@0, 2 44 0 0 ENSG00000225135.1 ENST00000443556.1 chr6:147708800-147711601 2 1475 1324 intergenic -2.66 1 0,0,1 0 0,0,1 353.974237288136 541.151812688822 86.993 228.970169491525 358.916163141994 67.135 227.090169491526 328.600453172205 33.189 0 0 cat,chimp,cow,dog,elephant,guinea_pig,horse,human,macaque,marmoset,mouse,opossum,orangutan,panda,pig,platypus,rabbit,rat, lincRNA lincRNA A549@0.776582,AG04450@1.61747,BJ@0.946104,GM12878@0.773642,H1HESC@0.105246,HELAS3@0.99304,HEPG2@0.673133,HMEC@0.390888,HSMM@0.53688,HUVEC@0.417488,K562@9.05878,MCF7@1.01951,NHEK@0.683811,NHLF@1.14246,SKNSHRA@1.45361, 0 0 0 0 ENSG00000227681.1 ENST00000427015.1 chr6:147981839-148275073 3 770 292460 intergenic -1.69 0 0,1,0 1 0,0,0 19.3493506493507 26.5624187923135 55.278 7.51688311688312 30.5380325514601 75.529 13.0688311688312 31.5120700266703 72.321 0 0 cat,chimp,cow,dog,elephant,guinea_pig,horse,human,macaque,marmoset,mouse,orangutan,panda,pig,rabbit,rat, lincRNA lincRNA A549@0.0578235,AG04450@0.098561,BJ@0.13514,GM12878@0.014575,H1HESC@0,HELAS3@0.264711,HEPG2@2.96148,HMEC@0,HSMM@0.0509985,HUVEC@0.09105,K562@11.2708,MCF7@0,NHEK@0.00315967,NHLF@0.0143415,SKNSHRA@0, 0 0 0 0 ENSG00000227681.1 ENST00000432506.1 chr6:147981873-148058692 3 403 76412 intergenic 2.86 1 1,1,1 1 0,0,0 140.883374689826 21.2488090875779 55.278 116.913151364764 30.5464586714129 75.529 145.33746898263 32.1951918546825 72.321 0 0 cat,chimp,cow,dog,elephant,guinea_pig,horse,human,macaque,marmoset,mouse,opossum,orangutan,panda,pig,rabbit,rat, lincRNA lincRNA A549@0.0578235,AG04450@0.098561,BJ@0.13514,GM12878@0.014575,H1HESC@0,HELAS3@0.264711,HEPG2@2.96148,HMEC@0,HSMM@0.0509985,HUVEC@0.09105,K562@11.2708,MCF7@0,NHEK@0.00315967,NHLF@0.0143415,SKNSHRA@0, 0 0 0 0 ENSG00000227681.1 ENST00000442094.1 chr6:147997211-148058692 3 401 61076 intergenic 2.86 1 0,0,1 0 0,0,0 191.062344139651 21.79962669461 27.376 120.588528678304 32.4158098107276 40.992 151.107231920199 34.0619228502194 39.943 0 0 cat,chimp,cow,dog,elephant,guinea_pig,horse,human,macaque,marmoset,mouse,opossum,orangutan,panda,pig,platypus,rabbit,rat, lincRNA lincRNA A549@0.0578235,AG04450@0.098561,BJ@0.13514,GM12878@0.014575,H1HESC@0,HELAS3@0.264711,HEPG2@2.96148,HMEC@0,HSMM@0.0509985,HUVEC@0.09105,K562@11.2708,MCF7@0,NHEK@0.00315967,NHLF@0.0143415,SKNSHRA@0, 0 0 0 0 ENSG00000227681.1 ENST00000434985.1 chr6:148013534-148058692 3 410 44744 intergenic 2.86 1 0,0,1 0 0,0,0 138.478048780488 24.535289647774 32.24 114.917073170732 39.1998927230467 11.663 147.00487804878 41.3188136956911 11.939 0 0 cat,chimp,cow,dog,elephant,guinea_pig,horse,human,macaque,marmoset,mouse,opossum,orangutan,panda,pig,rabbit,rat, lincRNA lincRNA A549@0.0578235,AG04450@0.098561,BJ@0.13514,GM12878@0.014575,H1HESC@0,HELAS3@0.264711,HEPG2@2.96148,HMEC@0,HSMM@0.0509985,HUVEC@0.09105,K562@11.2708,MCF7@0,NHEK@0.00315967,NHLF@0.0143415,SKNSHRA@0, 0 0 0 0 ENSG00000226249.1 ENST00000448909.1 chr6:148062570-148064460 2 601 1287 intergenic -19.59 1 0,0,0 0 0,0,0 0 36.7264957264957 0 6.40931780366057 38.1895881895882 2.7 6.74376039933444 42.1359751359751 2.84 0 0 cat,chimp,cow,dog,elephant,horse,human,macaque,marmoset,orangutan,panda,pig,rabbit, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000234675.1 ENST00000422023.1 chr6:148338558-148342110 3 443 3105 intergenic -2.79 1 0,0,0 0 0,0,0 0 0 9.2 0 1.63961352657005 6.855 0 1.75169082125604 6.995 0 0 chimp,elephant,human,macaque,marmoset,orangutan,panda, lincRNA lincRNA A549@0,AG04450@0,BJ@0.0240665,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0.0061115,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000230205.1 ENST00000417838.1 chr6:148454945-148458540 2 424 3169 intergenic 5.89 0 0,0,0 0 0,0,0 0 68.5579047017987 0 0 70.1536762385611 3.585 0 67.0997159987378 3.645 0 0 chimp,dog,elephant,guinea_pig,horse,human,macaque,marmoset,orangutan,panda,rabbit,rat, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000224658.1 ENST00000423268.1 chr6:148558721-148604544 4 307 45510 intronic 0 0 0,0,1 0 0,0,0 0 23.7250714128763 0 3.89250814332248 24.3650186772138 0 4.21824104234528 26.1685563612393 0 0 0 chimp,horse,human,macaque,marmoset,rabbit, antisense antisense A549@0,AG04450@0,BJ@0.007781,GM12878@0.034154,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0.0345945, 0 0 0 0 ENSG00000227660.1 ENST00000413845.1 chr6:149276764-149285820 3 711 8341 exonic 2.51 0 0,0,0 0 0,0,0 4.88326300984529 11.1200095911761 0 6.43881856540084 13.0567078287975 1.434 11.5302390998594 14.8687207768853 1.458 0 0 cat,chimp,dog,horse,human,macaque,marmoset,orangutan,panda,rat, antisense antisense A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000236591.1 ENST00000433442.1 chr6:149348836-149353709 2 128 4743 intronic -7.70 0 1,1,1 0 0,0,0 0 1.62344507695551 62.789 0 1.88530465949821 25.729 0 3.08032890575585 21.186 0 0 chimp,human,orangutan, antisense antisense A549@0.021247,AG04450@0,BJ@0,GM12878@0.992773,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000225924.1 ENST00000424421.1 chr6:149564435-149565137 2 560 140 intronic -10.75 0 0,1,0 0 0,0,0 13.75 0 0 62.6678571428571 0 0 60.7125 0 0 0 0 cat,chimp,cow,dog,elephant,horse,human,macaque,marmoset,mouse,orangutan,panda,pig,rabbit, antisense antisense A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000235168.1 ENST00000446392.1 chr6:149882288-149885085 2 376 2419 intergenic -1.82 0 0,0,1 0 0,0,0 0 0 0 0 0 0 0 0 0 0 0 chimp,cow,elephant,horse,human,macaque,marmoset,orangutan,pig,rabbit,rat, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000237502.1 ENST00000435273.1 chr6:149896841-149897260 2 360 57 intronic -10.00 0 0,0,0 0 0,0,0 0 0 0 0 0 0 0 0 0 0 0 chimp,elephant,human,macaque,marmoset,orangutan, antisense antisense A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000233330.1 ENST00000419134.1 chr6:149912891-149913799 2 338 568 intergenic -1.17 1 0,0,0 0 0,0,0 0 0 0 0 0 0 0 0 0 0 0 cow,elephant,horse,human,macaque,marmoset,orangutan,panda, antisense antisense A549@0.0335015,AG04450@0.0714255,BJ@0.010523,GM12878@0.0172025,H1HESC@0,HELAS3@0.031223,HEPG2@0.0127985,HMEC@0,HSMM@0.006052,HUVEC@0.0425945,K562@0.166501,MCF7@0.02064,NHEK@0,NHLF@0,SKNSHRA@0.122015, 0 0 0 0 ENSG00000231760.1 ENST00000455607.1 chr6:150118392-150119308 2 434 480 intronic -4.04 0 0,0,0 0 0,0,0 0 0 0 0 0 6.2 0 0 16.894 0 0 chimp,human,macaque,marmoset,orangutan, antisense antisense A549@0.036829,AG04450@0.879061,BJ@0.005647,GM12878@0.012181,H1HESC@0.04005,HELAS3@0.746966,HEPG2@0.347613,HMEC@0.065739,HSMM@0.033544,HUVEC@0.586917,K562@0.017518,MCF7@0.240117,NHEK@0.357113,NHLF@0.0222765,SKNSHRA@0.3212, 0 0 0 0 ENSG00000223701.1 ENST00000446954.1 chr6:150211239-150240644 3 489 28912 exonic -0.70 1 0,1,0 0 0,0,0 0 0 0 4.05725971370143 3.43248478140564 0 4.10633946830266 3.70323741007194 0 0 0 chimp,cow,horse,human,macaque,marmoset,orangutan,pig,rabbit, processed_transcript processed_transcript A549@0.027367,AG04450@0.0252705,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0.009234,HSMM@0.0094785,HUVEC@0.0794055,K562@0,MCF7@0.0314145,NHEK@0.0226783,NHLF@0.0380175,SKNSHRA@0.161765, 0 0 0 0 ENSG00000216621.3 ENST00000435483.1 chr6:150255663-150256756 2 498 593 intergenic 4.48 0 0,0,0 0 0,0,0 0 0 0 0 0 0 0 0 0 0 0 chimp,human,macaque,marmoset,orangutan, processed_transcript processed_transcript A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0.05011,NHEK@0,NHLF@0,SKNSHRA@0.019803, 0 0 0 0 ENSG00000216621.3 ENST00000421363.1 chr6:150255663-150257152 2 800 687 intergenic 6.24 0 0,0,0 0 0,0,0 0 0 0 0 0 0 0 0 0 0 0 chimp,human,macaque,orangutan, processed_transcript processed_transcript A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0.05011,NHEK@0,NHLF@0,SKNSHRA@0.019803, 106 2 60 2 ENSG00000235972.1 ENST00000456346.1 chr6:150361683-150363169 2 878 606 intergenic 3.70 0 0,0,0 0 0,0,0 0 0 0 0 0 0 0 0 396.93 0 0 chimp,human,macaque,marmoset,orangutan, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0.0023575,HELAS3@0,HEPG2@0.0061995,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 106 2 60 2 ENSG00000232891.1 ENST00000430770.1 chr6:150921970-150926986 2 376 4638 intronic 3.00 0 0,1,0 0 0,0,0 0 13.9228115567055 0 0 8.07395429064252 6.137 0 8.98771021992238 7.477 0 0 chimp,guinea_pig,horse,human,macaque,marmoset,orangutan,rabbit, sense_intronic sense_intronic A549@0,AG04450@0,BJ@0,GM12878@0.0662015,H1HESC@0.0187905,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0.0138333,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000224029.1 ENST00000456018.1 chr6:150945813-150947222 2 637 770 intronic -2.39 0 0,0,0 0 0,0,0 0 0 0 0 0 0 0 0 0 0 0 chimp,human,macaque,marmoset,mouse,orangutan, sense_intronic sense_intronic A549@0,AG04450@0,BJ@0,GM12878@0.0246565,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0.096258,K562@0,MCF7@0,NHEK@0.011797,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000226599.1 ENST00000455229.1 chr6:150971908-150973161 2 612 639 exonic -3.42 0 0,0,1 0 0,0,0 0 0 0 3.51470588235294 0 6.006 4 0 7.753 0 0 chimp,elephant,human,macaque,marmoset,orangutan, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000232290.1 ENST00000445833.1 chr6:151376033-151377193 2 394 764 intronic 0 0 0,0,0 0 0,0,0 0 0 0 4.85279187817259 0 0 5.09644670050761 0 0 0 0 chimp,human,macaque,marmoset,orangutan, antisense antisense A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000223598.1 ENST00000415477.1 chr6:151409239-151549582 5 848 139487 intronic 5.34 0 0,0,0 0 0,0,0 0 5.43797629886656 0 5.71344339622642 6.0275366163155 2.976 5.9375 11.6610150049826 3.108 0 0 cat,chimp,guinea_pig,human,macaque,marmoset,orangutan,rabbit, processed_transcript processed_transcript A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000231883.1 ENST00000431947.1 chr6:151517816-151518773 2 802 153 intergenic 1.03 0 0,0,0 0 0,0,0 0 0 0 4.60099750623441 0 4.712 4.67206982543641 0 14.805 0 0 chimp,elephant,human,macaque,marmoset,orangutan,rabbit, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000233823.1 ENST00000451697.1 chr6:152134411-152135314 2 256 645 intronic -0.27 0 0,0,0 0 0,0,0 0 0 0 0 0 13.553 0 0 18.561 0 0 cat,chimp,dog,elephant,horse,human,macaque,marmoset,orangutan,panda,pig, antisense antisense A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000234577.1 ENST00000412161.1 chr6:152701681-152702699 2 551 465 exonic -0.78 0 0,1,0 0 0,0,0 390.068965517241 154.283870967742 40.698 222.453720508167 66.3892473118279 35.541 225.627949183303 82.9462365591398 31.678 0 0 cat,chimp,cow,dog,elephant,guinea_pig,horse,human,macaque,marmoset,mouse,opossum,orangutan,panda,pig,platypus,rabbit,rat, antisense antisense A549@0.023904,AG04450@0.165422,BJ@0.079252,GM12878@0.028987,H1HESC@0,HELAS3@0,HEPG2@0.0847695,HMEC@0.022213,HSMM@0.291814,HUVEC@0.0571355,K562@0,MCF7@0,NHEK@0.142484,NHLF@0.0350485,SKNSHRA@0.00822, 0 0 0 0 ENSG00000226193.1 ENST00000458194.1 chr6:152723533-152726101 2 383 2183 intronic -2.23 0 0,0,1 0 0,0,0 0 17.7159871736143 0 0 27.0128263857077 0 0 30.1759047182776 0 0 0 cat,chimp,human,macaque,orangutan, antisense antisense A549@0.56971,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0.030369,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0.360709,NHLF@0.0050115,SKNSHRA@0.0128795, 0 0 0 0 ENSG00000233464.1 ENST00000449282.1 chr6:152867068-152868109 2 712 327 intronic 0 0 0,0,0 0 0,0,0 0 0 0 0 0 0 0 0 0 0 0 cat,chimp,cow,dog,elephant,guinea_pig,horse,human,macaque,orangutan,panda,rabbit, antisense antisense A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0.003183, 0 0 0 0 ENSG00000224893.1 ENST00000456715.1 chr6:153115631-153153048 3 439 36974 intergenic -8.03 1 0,1,0 0 0,0,0 0 7.2777357061719 0 0 8.92080921728782 0 0 9.63990912533131 0 0 0 cat,chimp,cow,dog,guinea_pig,horse,human,macaque,marmoset,orangutan,pig, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0.016976,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000224893.1 ENST00000417654.1 chr6:153125888-153126263 2 242 131 intergenic 0 0 0,0,1 0 0,0,0 0 0 0 0 0 12.702 0 0 20.589 0 0 chimp,dog,human,macaque,marmoset,orangutan,pig, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0.016976,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000227627.1 ENST00000442269.1 chr6:153304885-153310358 3 660 4809 exonic 0 0 1,1,1 1 0,0,0 0 0 17.649 0 2.20357662715741 90.41 0 2.30255770430443 82.663 0 0 chimp,human,macaque,marmoset,orangutan, antisense antisense A549@1.69511,AG04450@1.10559,BJ@0.845338,GM12878@4.63759,H1HESC@3.31977,HELAS3@2.9848,HEPG2@2.83202,HMEC@0.352027,HSMM@1.23238,HUVEC@0.531219,K562@8.2,MCF7@2.99589,NHEK@0.223482,NHLF@0.489646,SKNSHRA@2.17766, 0 0 0 0 ENSG00000237312.1 ENST00000436953.1 chr6:153625730-153630117 3 435 3948 intronic -4.87 0 0,0,1 0 0,0,0 0 11.9736575481256 18.761 0 22.7695035460993 0 0 24.9369300911854 0 0 0 chimp,dog,elephant,human,macaque,marmoset,orangutan, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000235381.1 ENST00000435295.1 chr6:155574273-155577858 2 3086 497 exonic -1.40 0 0,0,1 0 0,0,1 40.1147116007777 104.881287726358 291.876 37.5599481529488 70.4144869215292 217.263 44.9471808165911 88.5714285714286 267.446 0 0 chimp,human,macaque,orangutan, antisense antisense A549@0.319347,AG04450@0.329135,BJ@0.300685,GM12878@0.654006,H1HESC@0.909113,HELAS3@0.803179,HEPG2@1.94663,HMEC@0.300827,HSMM@0.192346,HUVEC@0.382785,K562@1.08312,MCF7@0.366532,NHEK@0.457956,NHLF@0.153634,SKNSHRA@1.80375, 0 0 0 0 ENSG00000232529.1 ENST00000453579.1 chr6:155701645-155702317 2 552 118 intergenic -0.37 1 0,0,0 0 0,0,0 0 0 0 0 0 8.767 0 0 12.665 0 0 chimp,horse,human,macaque,marmoset,orangutan,panda, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000227360.1 ENST00000449072.1 chr6:156814360-156820905 3 530 6011 intergenic -0.76 0 0,0,1 0 0,0,0 0 20.8471136250208 0 24.2679245283019 7.25486607885543 1.195 29.1924528301887 16.2047912161038 1.255 0 0 cat,chimp,cow,dog,elephant,horse,human,macaque,marmoset,orangutan,panda,pig, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000227360.1 ENST00000433486.1 chr6:156818880-156820100 2 398 820 intergenic -0.76 0 0,0,1 0 0,0,0 0 0 0 0 0 3.427 0 0 3.703 0 0 cat,chimp,cow,dog,horse,human,macaque,marmoset,orangutan,panda,pig, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000233044.1 ENST00000442936.1 chr6:157428861-157440840 2 421 11556 intronic -12.05 0 0,0,1 0 0,0,0 0 25.1054863274489 0 0 20.8769470404984 25.117 0 28.6661474558671 61.875 0 0 chimp,cow,horse,human,macaque,marmoset,orangutan,panda, antisense antisense A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000234361.1 ENST00000411838.1 chr6:158250175-158251605 2 679 749 intronic -0.24 0 0,0,1 0 0,0,0 0 0 0 0 0 5.1 0 0 9.571 0 0 chimp,cow,horse,human,macaque,marmoset,orangutan, antisense antisense A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0.0118655,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000229502.1 ENST00000422776.1 chr6:158293603-158296242 3 740 1895 exonic 2.95 0 0,1,1 0 0,0,0 36.8027027027027 13.3277044854881 0 62.9945945945946 22.9197889182058 1.53 67.0851351351351 27.2986807387863 9.207 0 0 chimp,cow,dog,elephant,human,macaque,marmoset,orangutan,pig,rabbit, antisense antisense A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000229502.1 ENST00000457427.1 chr6:158295142-158296242 3 609 487 exonic -2.73 0 0,1,0 0 0,0,0 44.7192118226601 0 0 75.8768472906404 0 1.53 83.9096880131363 0 9.207 0 0 chimp,cow,dog,guinea_pig,horse,human,macaque,marmoset,orangutan,panda,pig, antisense antisense A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000236324.1 ENST00000446768.1 chr6:158306146-158313818 2 370 7300 intronic 1.27 0 0,0,0 0 0,0,0 0 4.80767123287671 0 0 9.97260273972603 0 0 10.9680821917808 0 0 0 cat,chimp,cow,dog,elephant,guinea_pig,horse,human,macaque,marmoset,orangutan,panda, antisense antisense A549@0,AG04450@0.008668,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000233496.1 ENST00000442328.1 chr6:158422139-158423415 3 596 676 intronic -0.30 0 0,1,0 0 0,0,0 0 0 0 0 0 0 0 0 0 0 0 chimp,horse,human,orangutan, sense_intronic sense_intronic A549@0.024153,AG04450@0.0105205,BJ@0,GM12878@0,H1HESC@0,HELAS3@0.015646,HEPG2@0.124372,HMEC@0,HSMM@0,HUVEC@0.048264,K562@0.0280955,MCF7@0.0194525,NHEK@0,NHLF@0,SKNSHRA@0.010112, 0 0 0 0 ENSG00000236537.1 ENST00000432358.1 chr6:158703295-158733390 2 422 29671 intergenic 0 0 0,0,1 0 0,0,0 270.035545023697 6.27572377068518 0 124.267772511848 3.69502207542718 2.04 105.225118483412 4.81830743823936 2.12 0 0 cat,chimp,cow,dog,elephant,guinea_pig,horse,human,macaque,marmoset,mouse,opossum,orangutan,panda,pig,rabbit,rat, lincRNA lincRNA A549@4.12204,AG04450@6.04176,BJ@3.49491,GM12878@3.28445,H1HESC@2.54582,HELAS3@4.0287,HEPG2@4.18839,HMEC@1.30371,HSMM@5.52278,HUVEC@3.56014,K562@7.82459,MCF7@2.67333,NHEK@4.31845,NHLF@2.05079,SKNSHRA@10.2552, 0 0 0 0 ENSG00000238019.1 ENST00000435116.1 chr6:158818917-158819593 2 141 533 intronic 0 0 0,0,1 0 0,0,0 0 0 0 0 0 0 0 0 0 0 0 chimp,human,macaque,marmoset,orangutan, antisense antisense A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0.10183, 0 0 0 0 ENSG00000233893.1 ENST00000451712.1 chr6:159239043-159241625 2 215 2365 exonic -12.30 0 0,1,0 0 0,0,0 0 0 0 0 8.96955602536998 6.069 39.5348837209302 21.430866807611 9.784 0 0 human,macaque,marmoset,orangutan, antisense antisense A549@0,AG04450@0,BJ@0.0224975,GM12878@0.0367115,H1HESC@0,HELAS3@0.110073,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0.0228685, 0 0 0 0 ENSG00000226032.1 ENST00000446887.1 chr6:159485760-159486305 2 329 214 intergenic 2.30 0 0,0,0 0 0,0,0 0 0 8.365 0 0 11.598 0 0 17.963 0 0 cat,chimp,cow,dog,guinea_pig,human,macaque,marmoset,orangutan, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000224478.1 ENST00000421161.1 chr6:159528823-159537085 4 841 7415 intergenic 5.92 0 0,0,0 0 0,0,0 0 1.16035064059339 0 0 1.2633850303439 0 0 1.3788267026298 0 0 0 chimp,human,macaque,orangutan,panda, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0.339834,H1HESC@0.0166235,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0.00974,HUVEC@0,K562@0,MCF7@0,NHEK@0.00151067,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000233682.1 ENST00000419064.1 chr6:159586941-159588385 2 383 1059 intergenic 0 0 0,0,0 0 0,0,0 0 0 0 0 0 3.822 0 0 5.075 0 0 chimp,horse,human,macaque,marmoset,orangutan,panda, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000235086.1 ENST00000419703.1 chr6:159661818-159664361 2 514 2027 intronic -1.39 0 0,0,0 0 0,0,0 0 0 12.54 0.511673151750973 0.892451899358658 27.912 0.552529182879377 1.21164282190429 40.557 0 0 cat,chimp,cow,dog,elephant,guinea_pig,horse,human,macaque,marmoset,orangutan,panda,pig, sense_intronic sense_intronic A549@0.0024015,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0.0196325,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0.0046015,SKNSHRA@0, 0 0 0 0 ENSG00000231178.1 ENST00000427460.1 chr6:159774954-159775705 2 418 331 intergenic 1.09 0 0,0,0 0 0,0,0 0 0 0 0 0 0 0 0 0 0 0 chimp,human,macaque,orangutan, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000234777.1 ENST00000429657.1 chr6:159804563-159817475 3 769 12139 intergenic -3.08 0 0,0,0 0 0,0,0 0 0.779306367905099 0 0 0.551610511574265 0 0 0.985336518658868 0 0 0 chimp,human,macaque,pig, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0.0026655,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000237927.1 ENST00000430078.1 chr6:160007987-160010201 2 2000 212 intergenic 1.52 0 0,0,1 0 0,0,0 0 0 0 0 0 0 4.4955 0 0 0 0 cat,chimp,human,marmoset,orangutan,panda, lincRNA lincRNA A549@0.0414755,AG04450@0.043781,BJ@0.003233,GM12878@0.01349,H1HESC@0,HELAS3@0.0351755,HEPG2@0.0180065,HMEC@0.008181,HSMM@0.0088875,HUVEC@0.011348,K562@0.0378745,MCF7@0.019308,NHEK@0.00522633,NHLF@0.00679,SKNSHRA@0.016393, 0 0 0 0 ENSG00000224073.1 ENST00000427974.1 chr6:160060339-160061133 2 739 53 intergenic -3.81 0 0,0,0 0 0,0,0 0 0 0 0 0 0 4.27469553450609 0 0 0 0 chimp,human,macaque,marmoset,orangutan, lincRNA lincRNA A549@0.0236985,AG04450@0.117418,BJ@0.037177,GM12878@0.0493395,H1HESC@0.011198,HELAS3@0.083529,HEPG2@0.062423,HMEC@0,HSMM@0.0194375,HUVEC@0.106178,K562@0.249385,MCF7@0.0656185,NHEK@0.0229,NHLF@0.0208315,SKNSHRA@0.180506, 0 0 0 0 ENSG00000236823.1 ENST00000434562.1 chr6:160320218-160323542 2 593 2729 intergenic 5.09 0 0,0,1 0 0,0,0 0 0 0 0 0 0 0 0 70.434 0 0 horse,human,marmoset, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0.0582375,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000230234.1 ENST00000419196.1 chr6:160693649-160697162 2 465 3046 intronic -4.88 0 0,0,0 0 0,0,0 0 15.7189757058437 0 14.6064516129032 5.20026263952725 6.311 15.3784946236559 6.83749179251477 3.808 0 0 chimp,horse,human,macaque,marmoset,orangutan,panda,rat, lincRNA lincRNA A549@0.106125,AG04450@0,BJ@0,GM12878@0.255331,H1HESC@0.0105975,HELAS3@0.0213755,HEPG2@0,HMEC@0.008768,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0.109756,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000224477.1 ENST00000448126.1 chr6:161119320-161121664 2 290 2052 intergenic 2.06 0 0,0,0 0 0,0,0 0 0 0 0 0 9.106 0 0 10.382 0 0 cat,chimp,horse,human,macaque,marmoset,orangutan, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000224477.1 ENST00000447702.1 chr6:161119525-161121664 2 120 2017 intergenic 0 0 0,0,0 0 0,0,0 0 0 0 0 0 9.106 0 0 10.382 0 0 chimp,human,macaque,marmoset,orangutan, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000223627.1 ENST00000454317.1 chr6:161236582-161238383 3 1187 610 intergenic -1.90 0 0,0,0 0 0,0,0 0 0 0 0 0 0 0 0 0 0 0 chimp,elephant,guinea_pig,horse,human,macaque,orangutan,pig, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0.0022315,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000224371.1 ENST00000437861.1 chr6:161293920-161301426 2 308 7196 intergenic -4.66 0 0,0,0 0 0,0,0 0 0 0 0 0 0 0 0 0 0 0 chimp,human,macaque,marmoset,orangutan, lincRNA lincRNA A549@0,AG04450@0,BJ@0.0194945,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000224371.1 ENST00000454826.1 chr6:161293926-161339561 3 436 45195 intergenic 0 0 0,0,0 0 0,0,0 0 0 0 0 1.07332669543091 7.8 0 3.42128554043589 8.138 0 0 cat,chimp,human,marmoset,orangutan, lincRNA lincRNA A549@0,AG04450@0,BJ@0.0194945,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000224371.1 ENST00000443380.1 chr6:161294048-161339481 4 409 45018 intergenic 2.76 0 0,0,0 0 0,0,0 0 0 0 0 1.07754675907415 7.8 0 3.43473721622462 8.138 0 0 chimp,human,marmoset,orangutan, lincRNA lincRNA A549@0,AG04450@0,BJ@0.0194945,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000224371.1 ENST00000413062.1 chr6:161294118-161339681 3 329 45230 intergenic 0.33 0 0,0,1 0 0,0,0 0 0 0 0 1.07249613088658 7.8 0 3.41863807207606 8.138 0 0 cat,chimp,elephant,horse,human,macaque,marmoset,orangutan, lincRNA lincRNA A549@0,AG04450@0,BJ@0.0194945,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000233342.1 ENST00000420601.1 chr6:161347401-161348194 2 377 414 intergenic -2.84 0 0,0,1 0 0,0,0 0 0 0 0 0 0 0 0 0 0 0 chimp,human,macaque,marmoset,orangutan, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0.014005,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0.0702255,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000231863.1 ENST00000417479.1 chr6:161352112-161390803 4 569 38116 intergenic 2.16 0 0,1,0 0 0,0,0 0 2.94986357435198 0 0 2.6949574981635 1.673 0 4.51878476230454 1.701 0 0 chimp,human,macaque,marmoset,orangutan, antisense antisense A549@0.0075765,AG04450@0.00822,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0.011935,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0.007933, 0 0 0 0 ENSG00000225437.1 ENST00000440924.1 chr6:163463589-163467717 4 453 3669 intronic -3.44 1 0,0,1 0 0,0,0 0 0 53.293 26.0905077262693 1.14908694467157 67.2 27.3509933774834 1.20005451076588 68.584 0 0 chimp,cow,horse,human,orangutan, antisense antisense A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0.002286,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000225437.1 ENST00000433489.1 chr6:163464011-163472446 4 540 7889 intronic -2.16 1 0,0,0 0 0,0,0 0 6.75535555837242 0 21.887037037037 10.226137660033 1.24 22.9444444444444 10.7443275446825 3.808 0 0 chimp,human,orangutan, antisense antisense A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0.002286,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000225437.1 ENST00000418665.1 chr6:163464012-163475193 4 1296 9879 intronic 2.01 1 0,0,0 0 0,0,0 0 5.39457434963053 0 13.224537037037 9.44538920943416 0 15.7700617283951 10.3491244053042 0 0 0 cat,chimp,guinea_pig,horse,human,macaque,marmoset,orangutan,panda,pig, antisense antisense A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0.002286,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000228692.1 ENST00000446476.1 chr6:164007615-164009197 2 598 982 intergenic -6.84 0 0,0,0 0 0,0,0 0 0 0 0 0 0 0 0 0 0 0 chimp,human,macaque,marmoset,orangutan, lincRNA lincRNA A549@0,AG04450@0.111202,BJ@0.114181,GM12878@0.0482555,H1HESC@0.006915,HELAS3@0,HEPG2@0.03017,HMEC@0,HSMM@0.10167,HUVEC@0.185117,K562@0.031638,MCF7@0.0068535,NHEK@0.0577207,NHLF@0.012972,SKNSHRA@0.026657, 2 44 0 0 ENSG00000235538.1 ENST00000452944.1 chr6:164124936-164180873 2 717 55218 intergenic -0.07 0 0,0,0 0 0,0,0 0 6.02109819261835 0 0.345885634588563 4.76998442536854 0 0.369595536959554 6.70382846173349 0 0 0 chimp,human,macaque,orangutan,panda, lincRNA lincRNA A549@0,AG04450@0.022388,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0.006832,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000230627.1 ENST00000451328.1 chr6:164529652-164530726 2 446 626 intergenic 3.86 1 0,0,0 0 0,0,0 37.8116591928251 141.621405750799 0 15.8744394618834 62.7252396166134 5.152 9.79372197309417 128.375399361022 5.446 0 0 chimp,horse,human,macaque,marmoset,orangutan, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000226739.1 ENST00000434356.1 chr6:164767522-164769677 2 464 1689 intergenic 4.16 1 0,0,0 0 0,0,0 0 0 0 0 0 0 0 0 0 0 0 chimp,human,marmoset,orangutan,panda, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0.025509,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000227455.1 ENST00000456118.1 chr6:165241239-165243106 2 309 1556 intergenic 9.21 0 0,0,0 0 0,0,0 0 0 0 0 0 0 0 0 0 0 0 chimp,human,macaque,marmoset,orangutan, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000236627.1 ENST00000435810.1 chr6:166167677-166189268 2 1120 20469 intergenic 2.68 0 0,0,1 0 0,0,0 0 4.14622111485661 73.911 13.1294642857143 1.71625384728125 3.682 15.3348214285714 2.26044262054815 13.872 0 0 chimp,cow,dog,elephant,guinea_pig,horse,human,macaque,marmoset,mouse,orangutan,panda,pig, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0.019721,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000223942.1 ENST00000431017.1 chr6:166186689-166188674 2 357 1626 intergenic 1.60 0 0,1,0 0 0,0,0 0 13.7712177121771 0 0 1.37269372693727 24.377 0 1.43357933579336 28.251 0 0 cat,chimp,horse,human,macaque,marmoset,orangutan,panda, lincRNA lincRNA A549@2.44457,AG04450@0.0434385,BJ@0,GM12878@0,H1HESC@0,HELAS3@0.897019,HEPG2@0.73702,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0.231858, 0 0 0 0 ENSG00000256956.1 ENST00000535229.1 chr6:166193757-166399984 2 2042 204183 encompassing 10.55 0 0,0,0 0 0,0,0 56.3506366307542 1.3689288530387 24.409 46.7933398628795 1.70744871022563 19.907 59.3545543584721 2.90798450409682 40.754 0 1 chimp,human,macaque,orangutan, lincRNA lincRNA A549@4.29401,AG04450@0.1636,BJ@0.0086405,GM12878@0,H1HESC@0,HELAS3@2.46347,HEPG2@1.37732,HMEC@0,HSMM@0.0009225,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0.000484,SKNSHRA@0.270728, 0 0 0 0 ENSG00000223414.1 ENST00000444465.1 chr6:166322290-166401410 3 795 78321 exonic 2.73 0 0,1,0 1 0,0,0 0 3.28403620995646 117.004 7.16729559748428 2.78590671722782 141.562 15.3911949685535 4.06911300928231 151.364 0 0 chimp,human,macaque,orangutan,pig, lincRNA processed_transcript A549@19.4088,AG04450@1.45032,BJ@0.059995,GM12878@0,H1HESC@0,HELAS3@31.1738,HEPG2@5.1875,HMEC@0,HSMM@0.0222675,HUVEC@0,K562@0,MCF7@0.0011035,NHEK@0,NHLF@0.0068705,SKNSHRA@1.07761, 0 0 0 0 ENSG00000223414.1 ENST00000455853.1 chr6:166352944-166401527 2 1820 46761 exonic 5.75 1 0,1,0 1 0,0,0 0.240659340659341 4.80650542118432 116.128 4.31758241758242 3.68531468531469 139.672 9.06263736263736 4.87874510810291 147.395 0 0 cat,chimp,human,macaque,marmoset,orangutan,panda, lincRNA processed_transcript A549@19.4088,AG04450@1.45032,BJ@0.059995,GM12878@0,H1HESC@0,HELAS3@31.1738,HEPG2@5.1875,HMEC@0,HSMM@0.0222675,HUVEC@0,K562@0,MCF7@0.0011035,NHEK@0,NHLF@0.0068705,SKNSHRA@1.07761, 0 0 0 0 ENSG00000204517.4 ENST00000541163.1 chr6:166511208-166513125 2 1813 102 intergenic 1.60 0 0,0,0 0 0,0,0 0 0 0 0 0 0 0 0 0 1 1 chimp,human,macaque,marmoset,orangutan, lincRNA lincRNA A549@0.619913,AG04450@0.0795395,BJ@0,GM12878@0,H1HESC@0.0105055,HELAS3@0.0074695,HEPG2@0.0090175,HMEC@0,HSMM@0.0075355,HUVEC@0,K562@0,MCF7@0.0022155,NHEK@0,NHLF@0.0154415,SKNSHRA@0.03122, 0 0 0 0 ENSG00000231297.1 ENST00000456477.1 chr6:166513153-166526761 3 1032 12572 intergenic 0.53 0 0,1,0 0 0,0,0 0 0 0 3.70348837209302 0.339643652561247 0 5.60755813953488 0.344097995545657 0 0 0 human,orangutan, lincRNA lincRNA A549@0.036882,AG04450@0.0022755,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000233365.1 ENST00000444219.1 chr6:166650457-166657197 2 978 5760 intergenic 1.70 0 0,0,0 0 0,0,0 0 0.761979166666667 0 0 3.20381944444444 0 0 40.7637152777778 0 0 0 chimp,human,macaque,marmoset,orangutan, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000232468.2 ENST00000438051.2 chr6:166756132-166764957 2 3893 4930 intergenic 10.03 0 0,1,0 1 0,0,0 0 0 0 0 0 27.75 0 0 31.486 0 1 chimp,human,orangutan, lincRNA lincRNA A549@0.118765,AG04450@0.143721,BJ@0.113578,GM12878@0.260794,H1HESC@0.20164,HELAS3@0.127937,HEPG2@0.199165,HMEC@0.066229,HSMM@0.0824575,HUVEC@0.054646,K562@0.210069,MCF7@0.191966,NHEK@0.190241,NHLF@0.0876105,SKNSHRA@0.605417, 0 0 0 0 ENSG00000232082.1 ENST00000416770.1 chr6:166874151-166878871 4 575 4139 intronic -0.79 0 0,0,0 0 0,0,0 0 0 0 0 0.34646049770476 0 0 0.37545300797294 0 0 0 chimp,horse,human,macaque,marmoset,orangutan, sense_intronic sense_intronic A549@0,AG04450@0.0107165,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0.0142175,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0.009091, 0 0 0 0 ENSG00000231654.1 ENST00000455390.1 chr6:167317186-167318323 2 625 510 intronic 4.98 0 0,0,0 0 0,0,0 0 0 0 0 0 0 0 0 0 0 0 chimp,horse,human,macaque,marmoset, antisense antisense A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000227598.1 ENST00000444102.1 chr6:167383114-167412553 3 382 29053 intergenic -0.88 0 0,1,0 1 0,0,0 0 0.363473651602244 49.413 0 0.157987126974839 62.52 0 0.162668227033353 93.917 0 0 chimp,human,macaque,orangutan, antisense antisense A549@0.124975,AG04450@0.0218865,BJ@0.0670435,GM12878@0.437913,H1HESC@0.448044,HELAS3@0.370388,HEPG2@0.731609,HMEC@0.042542,HSMM@0.032643,HUVEC@0.238454,K562@0.616224,MCF7@0.139286,NHEK@0.00685033,NHLF@0.0201595,SKNSHRA@0.142537, 0 0 0 0 ENSG00000231720.1 ENST00000454185.1 chr6:167650996-167653968 2 577 2393 intergenic -1.70 0 0,0,1 0 0,0,0 0 0 0 0 0 0 0 0 0 0 0 human,macaque,orangutan, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0.0436175,HELAS3@0.33162,HEPG2@1.49507,HMEC@0,HSMM@0,HUVEC@0.012598,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000228648.1 ENST00000439207.1 chr6:167655379-167659404 2 203 3820 intergenic 0 0 1,1,1 1 0,0,0 0 0 0 0 0 0 0 0 0 0 0 human,macaque,orangutan,panda, lincRNA lincRNA A549@0.030284,AG04450@0,BJ@0.063143,GM12878@0,H1HESC@0.1764,HELAS3@0.0203615,HEPG2@0.334562,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0.027129, 0 0 0 0 ENSG00000203688.4 ENST00000400831.2 chr6:168080306-168084467 4 2553 1602 intergenic 9.99 0 0,0,1 0 0,0,0 0 0 0 0 0 0 0 0 0 0 0 chimp,human,macaque,orangutan, lincRNA lincRNA A549@0.0202635,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0.065297,HEPG2@0.20354,HMEC@0,HSMM@0,HUVEC@0.127559,K562@0,MCF7@0.0015725,NHEK@0.002063,NHLF@0.0015885,SKNSHRA@0, 0 0 0 0 ENSG00000198221.6 ENST00000359760.5 chr6:168224556-168227389 2 2236 595 intergenic 4.84 0 0,1,0 1 0,1,0 0 0 0 0.966010733452594 27.5563025210084 62.415 34.0916815742397 38.5025210084034 130.413 0 0 chimp,dog,horse,human,macaque,marmoset,orangutan, lincRNA processed_transcript A549@0.0097465,AG04450@0.0275635,BJ@0.0076445,GM12878@0.005991,H1HESC@1.03829,HELAS3@0.129521,HEPG2@1.35152,HMEC@0.029273,HSMM@0.0036775,HUVEC@0.150294,K562@0.400429,MCF7@0.103562,NHEK@0.149983,NHLF@0.010375,SKNSHRA@0.16688, 0 0 0 0 ENSG00000198221.6 ENST00000425438.1 chr6:168224790-168225454 2 309 353 intergenic 2.02 0 0,0,1 0 0,0,0 0 0 0 6.99029126213592 0 16.396 0 0 22.909 0 0 chimp,cow,elephant,guinea_pig,horse,human,macaque,marmoset,orangutan,pig, lincRNA processed_transcript A549@0.0097465,AG04450@0.0275635,BJ@0.0076445,GM12878@0.005991,H1HESC@1.03829,HELAS3@0.129521,HEPG2@1.35152,HMEC@0.029273,HSMM@0.0036775,HUVEC@0.150294,K562@0.400429,MCF7@0.103562,NHEK@0.149983,NHLF@0.010375,SKNSHRA@0.16688, 0 0 0 0 ENSG00000198221.6 ENST00000417244.1 chr6:168225709-168226140 3 179 248 intergenic 0 1 0,1,1 0 0,0,0 0 0 0 0 0 0 0 0 24.075 1 1 chimp,human,macaque,marmoset,orangutan, lincRNA processed_transcript A549@0.0097465,AG04450@0.0275635,BJ@0.0076445,GM12878@0.005991,H1HESC@1.03829,HELAS3@0.129521,HEPG2@1.35152,HMEC@0.029273,HSMM@0.0036775,HUVEC@0.150294,K562@0.400429,MCF7@0.103562,NHEK@0.149983,NHLF@0.010375,SKNSHRA@0.16688, 0 0 0 0 ENSG00000198221.6 ENST00000357510.6 chr6:168226197-168227466 2 868 399 intergenic 4.84 0 0,1,0 1 0,1,0 0 0 0 8.41013824884793 0 54.75 21.8594470046083 211.68671679198 102.847 0 0 cat,chimp,horse,human,macaque,marmoset,orangutan,panda,rat, lincRNA processed_transcript A549@0.0097465,AG04450@0.0275635,BJ@0.0076445,GM12878@0.005991,H1HESC@1.03829,HELAS3@0.129521,HEPG2@1.35152,HMEC@0.029273,HSMM@0.0036775,HUVEC@0.150294,K562@0.400429,MCF7@0.103562,NHEK@0.149983,NHLF@0.010375,SKNSHRA@0.16688, 0 0 0 0 ENSG00000198221.6 ENST00000414943.1 chr6:168226371-168227135 2 721 41 intergenic 4.84 0 0,1,1 1 0,1,0 0 0 0 0 0 62.415 30.7198335644938 0 182.343 0 0 cat,chimp,dog,guinea_pig,horse,human,macaque,marmoset,orangutan,panda,platypus,rat, lincRNA processed_transcript A549@0.0097465,AG04450@0.0275635,BJ@0.0076445,GM12878@0.005991,H1HESC@1.03829,HELAS3@0.129521,HEPG2@1.35152,HMEC@0.029273,HSMM@0.0036775,HUVEC@0.150294,K562@0.400429,MCF7@0.103562,NHEK@0.149983,NHLF@0.010375,SKNSHRA@0.16688, 0 0 0 0 ENSG00000235994.3 ENST00000538528.1 chr6:168376604-168377619 1 1015 0 intergenic -12.67 0 0,0,0 0 0,0,1 0 0 0 0 0 0 170.581280788177 0 0 0 1 chimp,human,macaque, lincRNA lincRNA A549@0.013011,AG04450@0,BJ@0,GM12878@0,H1HESC@0.143579,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0.048438, 0 0 0 0 ENSG00000235994.3 ENST00000441716.1 chr6:168377262-168379053 2 273 1516 intergenic 0.99 0 0,0,0 0 0,0,1 0 0 0 0 0 0 154.945054945055 0 0 0 0 chimp,human,macaque,marmoset,orangutan, lincRNA lincRNA A549@0.013011,AG04450@0,BJ@0,GM12878@0,H1HESC@0.143579,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0.048438, 0 0 0 0 ENSG00000229921.2 ENST00000456585.1 chr6:168393502-168397757 3 2792 1459 intergenic 9.87 1 0,0,1 0 0,1,0 0 0 0 1.03510028653295 0 0 1.72277936962751 0 0 1 1 chimp,human,macaque,marmoset,orangutan, lincRNA lincRNA A549@0.126881,AG04450@0,BJ@0,GM12878@0.006829,H1HESC@0.225424,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0.0236765,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0.13408, 0 0 0 0 ENSG00000229921.2 ENST00000414364.1 chr6:168394852-168397757 4 1416 1483 intergenic 12.89 0 0,0,1 0 0,1,0 0 0 0 0 1.94875252865813 0 0 3.2434254888739 0 1 1 chimp,human,macaque,marmoset,orangutan, lincRNA lincRNA A549@0.126881,AG04450@0,BJ@0,GM12878@0.006829,H1HESC@0.225424,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0.0236765,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0.13408, 0 0 0 0 ENSG00000234768.1 ENST00000457340.1 chr6:168595038-168605181 2 447 9694 intergenic 0 0 0,0,0 0 0,0,0 0 0 0 0 0 0 53.2281879194631 0 0 0 0 chimp,human,macaque,orangutan, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0.00462,HELAS3@0,HEPG2@0.049936,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000237987.1 ENST00000424343.1 chr6:168625959-168627197 2 453 783 intergenic -16.23 0 0,1,0 0 0,0,0 0 0 0 0 0 0 0 0 0 0 0 chimp,human,macaque,orangutan, lincRNA lincRNA A549@0.0060705,AG04450@0,BJ@0,GM12878@0,H1HESC@0.026126,HELAS3@0,HEPG2@0.0093655,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0.014508,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000228361.1 ENST00000434596.1 chr6:168630412-168641395 3 470 10509 intergenic 0.65 0 0,0,0 0 0,0,0 0 0 0 0 0 0 0 50.6458273860501 14.097 0 0 human,macaque,marmoset,orangutan, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000234647.1 ENST00000446811.1 chr6:168643618-168663261 5 2241 17394 intergenic 2.37 0 0,0,0 0 0,0,0 0 0 0 0 0 0 5.5528781793842 0 0 0 0 chimp,human,macaque,orangutan, lincRNA lincRNA A549@0.0073955,AG04450@0,BJ@0,GM12878@0,H1HESC@0.0025915,HELAS3@0.007434,HEPG2@0.008638,HMEC@0,HSMM@0,HUVEC@0,K562@0.009348,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000224417.1 ENST00000445442.1 chr6:168700863-168702794 2 443 1486 intronic -1.72 0 0,1,0 1 0,0,0 0 0 0 0 0 0 0 0 0 0 0 chimp,human,macaque,orangutan, sense_intronic sense_intronic A549@3.29454,AG04450@0,BJ@0,GM12878@0,H1HESC@0.050801,HELAS3@14.1196,HEPG2@3.63517,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0.0096195, 0 0 0 0 ENSG00000235815.1 ENST00000436492.1 chr6:169116745-169123604 3 554 6301 intergenic -0.24 0 0,0,1 0 0,0,0 0 0 0 0 1.5361053800984 0 0 16.1204570703063 0 0 0 chimp,human,macaque,marmoset,orangutan, lincRNA lincRNA A549@0,AG04450@0.005789,BJ@0,GM12878@0,H1HESC@0.0037245,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0.0193155, 0 0 0 0 ENSG00000225879.1 ENST00000444586.1 chr6:169362705-169364436 2 912 817 intergenic 2.14 0 0,0,0 0 0,0,0 0 0 23.46 0 0 12.479 0 0 32.403 0 0 chimp,human,macaque,marmoset,orangutan, lincRNA lincRNA A549@0,AG04450@0,BJ@0.0283245,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0.0058855, 0 0 0 0 ENSG00000229720.1 ENST00000419800.1 chr6:169434292-169435737 2 932 511 intergenic 6.78 0 0,0,0 0 0,0,0 0 0 0 0 0 10.165 0 0 12.035 0 0 chimp,human,macaque,marmoset,orangutan, lincRNA lincRNA A549@0.004648,AG04450@0.011948,BJ@0.705648,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0.035072,HSMM@0.491556,HUVEC@0,K562@0,MCF7@0,NHEK@0.00847467,NHLF@0.004178,SKNSHRA@0.0097335, 0 0 0 0 ENSG00000234519.1 ENST00000413324.1 chr6:169467913-169469511 2 391 1205 intergenic 1.49 1 0,0,0 0 0,0,0 0 0 0 0 0 0 0 0 0 0 0 chimp,horse,human,macaque,marmoset,orangutan, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000234519.1 ENST00000435377.1 chr6:169467994-169469519 2 302 1221 intergenic 1.49 1 0,0,0 0 0,0,0 0 0 0 0 0 0 0 0 0 0 0 chimp,horse,human,macaque,marmoset,orangutan, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000223485.1 ENST00000439703.1 chr6:169558187-169563019 2 645 4185 intergenic 1.17 0 0,1,0 0 0,0,0 61.9038759689922 0 0 36.5829457364341 0 0 48.3736434108527 2.98590203106332 4.896 0 0 chimp,human,macaque,marmoset,orangutan, lincRNA lincRNA A549@0.0280555,AG04450@0.098887,BJ@6.97033,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0.075944,HSMM@2.85893,HUVEC@0.101579,K562@0,MCF7@0.0509265,NHEK@0.0446753,NHLF@0.535327,SKNSHRA@0, 0 0 0 0 ENSG00000223485.1 ENST00000449466.1 chr6:169558356-169562396 4 599 3435 intergenic 0.69 0 0,0,1 0 0,0,0 43.0584307178631 0 0 99.5993322203673 0 0 14.3689482470785 3.63784570596798 0 0 0 chimp,human,macaque,orangutan, lincRNA lincRNA A549@0.0280555,AG04450@0.098887,BJ@6.97033,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0.075944,HSMM@2.85893,HUVEC@0.101579,K562@0,MCF7@0.0509265,NHEK@0.0446753,NHLF@0.535327,SKNSHRA@0, 0 0 0 0 ENSG00000226445.1 ENST00000444188.1 chr6:169613349-169639660 3 977 25330 intronic -3.34 1 0,1,0 1 0,0,0 0 19.9697196999605 0 0 34.9819976312673 0 0 61.8768258981445 0 0 0 chimp,human,macaque,marmoset, antisense antisense A549@0.186653,AG04450@0.131331,BJ@0.176837,GM12878@0.038502,H1HESC@0.100967,HELAS3@0.0230565,HEPG2@0.14022,HMEC@0.496984,HSMM@0.510779,HUVEC@0.18735,K562@0.03039,MCF7@0.533319,NHEK@0.053646,NHLF@0.223948,SKNSHRA@0.548148, 0 0 0 0 ENSG00000233085.1 ENST00000457833.1 chr6:169686629-169687571 2 652 288 intergenic 1.28 1 0,0,1 0 0,0,0 0 0 0 0 0 0 0 0 5.929 0 0 chimp,human,macaque,marmoset,orangutan, lincRNA lincRNA A549@0.130479,AG04450@0.003601,BJ@0.0074645,GM12878@0,H1HESC@0,HELAS3@0.0227205,HEPG2@0.153809,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0.060647,NHLF@0,SKNSHRA@0.011687, 0 0 0 0 ENSG00000233085.1 ENST00000435612.1 chr6:169686629-169689311 3 476 2202 intergenic -2.26 1 0,0,1 0 0,0,0 0 0 0 0 0 0 0 2.69255222524977 0 0 0 chimp,human,macaque,marmoset,orangutan, lincRNA lincRNA A549@0.130479,AG04450@0.003601,BJ@0.0074645,GM12878@0,H1HESC@0,HELAS3@0.0227205,HEPG2@0.153809,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0.060647,NHLF@0,SKNSHRA@0.011687, 0 0 0 0 ENSG00000226194.1 ENST00000433388.1 chr6:169770093-169788480 2 586 17799 intergenic 6.69 0 0,1,0 0 0,0,0 0 0 0 0 1.3317040283162 8.37 0 31.9423001292207 9.145 0 0 human,macaque,marmoset,orangutan, lincRNA lincRNA A549@0.002421,AG04450@0.000982,BJ@0.701792,GM12878@0,H1HESC@0.0508285,HELAS3@0,HEPG2@0.0037,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0.001413,NHLF@0.0066,SKNSHRA@0.082788, 0 0 0 0 ENSG00000226194.1 ENST00000440168.1 chr6:169773776-169788480 2 2280 12422 intergenic 6.69 0 0,1,1 0 0,0,0 0 0 0 3.38947368421053 1.28602479471905 8.37 5.96052631578947 7.8885847689583 9.145 0 0 chimp,horse,human,macaque,marmoset,orangutan, lincRNA lincRNA A549@0.002421,AG04450@0.000982,BJ@0.701792,GM12878@0,H1HESC@0.0508285,HELAS3@0,HEPG2@0.0037,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0.001413,NHLF@0.0066,SKNSHRA@0.082788, 0 0 0 0 ENSG00000232640.1 ENST00000413088.1 chr6:170125187-170125950 3 400 359 intergenic 0.65 1 0,1,1 0 0,0,0 0 0 0 0 0 0 0 0 0 0 0 human,macaque,marmoset,orangutan, antisense antisense A549@0.114902,AG04450@0.034381,BJ@0.0280695,GM12878@0,H1HESC@0.0299495,HELAS3@0.972328,HEPG2@1.44776,HMEC@0,HSMM@0.0102115,HUVEC@0.111183,K562@0.108381,MCF7@0.010204,NHEK@0,NHLF@0.085469,SKNSHRA@0.0069, 0 0 0 0 ENSG00000227704.1 ENST00000430250.1 chr6:170125600-170139088 2 333 13153 intergenic -5.26 0 0,0,0 0 0,0,0 0 0 0 0 0.272561392838136 0 0 0.295369877594465 4.617 0 0 chimp,human,orangutan, antisense antisense A549@0.009266,AG04450@0,BJ@0.0072235,GM12878@0.0079265,H1HESC@0.085665,HELAS3@0.0259495,HEPG2@0.047703,HMEC@0,HSMM@0.006142,HUVEC@0.07854,K562@0.015984,MCF7@0.0184125,NHEK@0,NHLF@0,SKNSHRA@0.103966, 0 0 0 0 ENSG00000229214.1 ENST00000437615.1 chr6:170188886-170198921 2 2416 7617 intergenic 12.24 0 0,1,1 0 0,0,0 0 0 0 0 0.156885913089143 0 0 0.159511618747538 0 0 0 chimp,human,macaque,marmoset,orangutan, lincRNA processed_transcript A549@0.0855425,AG04450@0.101795,BJ@0.132821,GM12878@0,H1HESC@0.122196,HELAS3@0.198951,HEPG2@0.527972,HMEC@0.165953,HSMM@0.082214,HUVEC@0.0574005,K562@0,MCF7@0.0851995,NHEK@0.05512,NHLF@0.241248,SKNSHRA@0.086924, 0 0 0 0 ENSG00000231690.2 ENST00000420557.2 chr6:170190417-170202969 3 2315 10233 intergenic 0.67 0 0,1,0 0 0,0,0 0 0 0 0 1.16612918987589 0 1.31663066954644 2.57392748949477 0 0 0 human,macaque,orangutan, lincRNA processed_transcript A549@0.14878,AG04450@0.063521,BJ@0.102671,GM12878@0.0043135,H1HESC@0.305514,HELAS3@0.358843,HEPG2@0.82179,HMEC@0.022964,HSMM@0.007676,HUVEC@0.029129,K562@0,MCF7@0.13497,NHEK@0.00282367,NHLF@0.133889,SKNSHRA@0.104224, 0 0 0 0 ENSG00000236173.1 ENST00000427017.1 chr6:170209414-170210198 2 692 90 intergenic -2.89 0 0,0,0 0 0,0,0 0 0 13.384 0 0 36.805 30.9956647398844 0 61.648 0 0 chimp,human,macaque,marmoset,orangutan, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000232197.1 ENST00000429305.1 chr6:170477741-170478251 2 427 81 intergenic 1.22 0 0,0,0 0 0,0,0 0 0 0 0 0 0 0 0 0 0 0 chimp,human,macaque,marmoset,orangutan, antisense antisense A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0.0047925,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000230960.1 ENST00000452071.1 chr6:170563422-170571657 3 1327 6904 intergenic 6.39 0 0,1,0 0 0,0,0 0 0 0 0 0.43018539976825 0 16.6865109269028 10.4984067207416 0 0 0 chimp,human,macaque,orangutan, antisense antisense A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0.0416043,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000227508.1 ENST00000422894.1 chr6:170584462-170588557 2 316 3777 intergenic -0.58 1 0,0,0 0 0,0,0 0 0 0 0 0 0 0 0 0 0 0 chimp,horse,human,macaque,marmoset,orangutan, lincRNA processed_transcript A549@0,AG04450@0,BJ@0,GM12878@0.0126785,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000227508.1 ENST00000438622.1 chr6:170586027-170588557 2 344 2184 intergenic -5.43 1 0,0,0 0 0,0,0 0 0 0 0 0 0 0 0 0 0 0 chimp,human,macaque,marmoset,orangutan, lincRNA processed_transcript A549@0,AG04450@0,BJ@0,GM12878@0.0126785,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000234986.1 ENST00000448824.1 chr6:171004401-171006038 3 803 830 intergenic 1.75 0 0,0,0 0 0,0,0 0 0 0 0 0 0 0 7.31927710843374 0 0 0 chimp,dog,human,macaque,marmoset,orangutan,panda,rabbit, lincRNA lincRNA A549@0,AG04450@0.008625,BJ@0,GM12878@0.0224235,H1HESC@0,HELAS3@0.020715,HEPG2@0.0416145,HMEC@0,HSMM@0,HUVEC@0.119355,K562@0.750951,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0.027955, 0 0 0 0 ENSG00000213863.2 ENST00000438217.1 chr6:171034285-171037576 2 756 2533 intergenic 4.03 1 0,0,1 0 0,0,0 0 0 0 0 0 0 0 0 313.11 0 0 chimp,human,macaque,orangutan, lincRNA lincRNA A549@0,AG04450@0.050796,BJ@0.067709,GM12878@0.0176885,H1HESC@0.0054735,HELAS3@0.002981,HEPG2@0.034325,HMEC@0.005402,HSMM@0.061476,HUVEC@0,K562@1.04393,MCF7@0.0294165,NHEK@0,NHLF@0.0128705,SKNSHRA@0.032946, 0 0 0 0 ENSG00000230423.1 ENST00000426839.1 chr6:171044839-171045633 2 331 461 intergenic 6.79 0 0,0,0 0 0,0,0 0 0 0 0 0 0 0 0 0 0 0 chimp,human,macaque,orangutan, lincRNA lincRNA A549@0.013037,AG04450@0.143935,BJ@0.116779,GM12878@0.014078,H1HESC@0,HELAS3@0.127593,HEPG2@0.226512,HMEC@0.012296,HSMM@0.0517875,HUVEC@0.224536,K562@4.33309,MCF7@0.632965,NHEK@0.0581487,NHLF@0.011719,SKNSHRA@0.106027, 0 0 0 0 ENSG00000225532.1 ENST00000415530.1 chr6:171045261-171046865 3 436 1164 intergenic 0 0 0,1,0 0 0,0,0 0 0 0 0 0 0 0 0 0 0 0 chimp,human,macaque,orangutan, lincRNA lincRNA A549@0.0552795,AG04450@0,BJ@0,GM12878@0.0464835,H1HESC@0.018902,HELAS3@0.0285245,HEPG2@0.064429,HMEC@0,HSMM@0.010385,HUVEC@0,K562@0.124918,MCF7@0.018319,NHEK@0,NHLF@0,SKNSHRA@0.005168, 0 0 0 0 ENSG00000244758.1 ENST00000480075.1 chr7:19757-35457 4 1001 14693 intergenic 13.27 0 0,0,0 0 0,0,0 0 1.26876744027768 0 0 2.20472333764378 0 0 3.96869257469543 0 0 0 chimp,human,marmoset,orangutan, lincRNA lincRNA A549@0.0064795,AG04450@0,BJ@0.038453,GM12878@0.008971,H1HESC@1.4523,HELAS3@0.008966,HEPG2@0.028271,HMEC@0.032277,HSMM@0.016007,HUVEC@0.173156,K562@0.510759,MCF7@0.215562,NHEK@0.138621,NHLF@0.0021975,SKNSHRA@0.0025595, 18 4 54 2 ENSG00000244758.1 ENST00000469418.1 chr7:20834-35479 3 885 13756 intergenic 8.84 0 0,0,0 0 0,0,0 0 1.3551904623437 0 0 1.49127653387613 0 0 1.54230881070079 0 0 0 chimp,human,marmoset,orangutan, lincRNA lincRNA A549@0.0064795,AG04450@0,BJ@0.038453,GM12878@0.008971,H1HESC@1.4523,HELAS3@0.008966,HEPG2@0.028271,HMEC@0.032277,HSMM@0.016007,HUVEC@0.173156,K562@0.510759,MCF7@0.215562,NHEK@0.138621,NHLF@0.0021975,SKNSHRA@0.0025595, 0 0 0 0 ENSG00000232325.3 ENST00000465755.1 chr7:70972-71835 2 757 104 intergenic -4.41 0 0,0,0 0 0,1,0 0 0 0 0 0 0 0 0 0 1 1 chimp,human,macaque,marmoset,orangutan, lincRNA lincRNA A549@0,AG04450@0.089917,BJ@0.0031885,GM12878@0,H1HESC@3.05273,HELAS3@0.0069935,HEPG2@0.005733,HMEC@0.053948,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0.0808535, 0 0 0 0 ENSG00000242611.1 ENST00000478759.1 chr7:77038-80418 2 603 2775 intergenic 12.07 0 0,1,0 0 0,0,0 0 0 0 0 0.861261261261261 0 0 0.875675675675676 0 0 0 chimp,human, lincRNA lincRNA A549@0,AG04450@0.00533,BJ@0.174184,GM12878@0,H1HESC@0.0192415,HELAS3@0,HEPG2@0,HMEC@0.074448,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0.00211,NHLF@0.0096395,SKNSHRA@0.0805035, 0 0 0 0 ENSG00000242474.1 ENST00000462565.1 chr7:135853-149362 4 658 12845 intergenic -9.52 0 0,1,1 1 0,0,0 0 0 0 0 0 0 0 2.75819384974698 0 0 0 human,macaque,orangutan, lincRNA lincRNA A549@0.259585,AG04450@0.132929,BJ@0.081702,GM12878@0,H1HESC@0.273931,HELAS3@1.09631,HEPG2@0.0760085,HMEC@0.054236,HSMM@0.102323,HUVEC@0.0855005,K562@0.1216,MCF7@0.497177,NHEK@0.073081,NHLF@0.062641,SKNSHRA@0.205094, 0 0 0 0 ENSG00000242474.1 ENST00000480919.1 chr7:144444-145430 2 503 481 intergenic 3.68 0 0,0,0 0 0,0,0 0 0 0 0 0 0 0 0 0 0 0 chimp,human,macaque,marmoset,orangutan, lincRNA lincRNA A549@0.259585,AG04450@0.132929,BJ@0.081702,GM12878@0,H1HESC@0.273931,HELAS3@1.09631,HEPG2@0.0760085,HMEC@0.054236,HSMM@0.102323,HUVEC@0.0855005,K562@0.1216,MCF7@0.497177,NHEK@0.073081,NHLF@0.062641,SKNSHRA@0.205094, 0 0 0 0 ENSG00000242474.1 ENST00000497320.1 chr7:148328-149466 2 427 709 intergenic 5.36 0 0,1,0 1 0,0,0 0 0 0 0 0 0 0 0 0 0 0 chimp,human,macaque,marmoset,orangutan, lincRNA lincRNA A549@0.259585,AG04450@0.132929,BJ@0.081702,GM12878@0,H1HESC@0.273931,HELAS3@1.09631,HEPG2@0.0760085,HMEC@0.054236,HSMM@0.102323,HUVEC@0.0855005,K562@0.1216,MCF7@0.497177,NHEK@0.073081,NHLF@0.062641,SKNSHRA@0.205094, 0 0 0 0 ENSG00000242474.1 ENST00000487884.1 chr7:148329-149438 2 494 613 intergenic 4.12 0 0,1,0 1 0,0,0 0 0 0 0 0 0 0 0 0 0 0 chimp,human,macaque,marmoset,orangutan, lincRNA lincRNA A549@0.259585,AG04450@0.132929,BJ@0.081702,GM12878@0,H1HESC@0.273931,HELAS3@1.09631,HEPG2@0.0760085,HMEC@0.054236,HSMM@0.102323,HUVEC@0.0855005,K562@0.1216,MCF7@0.497177,NHEK@0.073081,NHLF@0.062641,SKNSHRA@0.205094, 0 0 0 0 ENSG00000240859.1 ENST00000484550.1 chr7:149597-155465 2 5006 860 intergenic 7.09 1 0,1,1 0 0,0,0 0 0 0 0 3.74883720930233 0 0 9.24418604651163 0 0 0 human,macaque,orangutan, lincRNA processed_transcript A549@0.087414,AG04450@0.295015,BJ@1.16256,GM12878@0.0015705,H1HESC@0.172411,HELAS3@0.045592,HEPG2@0.007933,HMEC@0.213723,HSMM@0.0650205,HUVEC@0.103049,K562@0.006999,MCF7@0.681658,NHEK@0.14913,NHLF@0.958807,SKNSHRA@0.077824, 0 0 0 0 ENSG00000240859.1 ENST00000479592.1 chr7:149731-153490 3 588 3167 intergenic 6.92 0 0,1,1 1 0,0,0 0 0 0 0 1.01799810546258 0 0 2.51026207767603 0 0 0 chimp,human,macaque,orangutan, lincRNA processed_transcript A549@0.087414,AG04450@0.295015,BJ@1.16256,GM12878@0.0015705,H1HESC@0.172411,HELAS3@0.045592,HEPG2@0.007933,HMEC@0.213723,HSMM@0.0650205,HUVEC@0.103049,K562@0.006999,MCF7@0.681658,NHEK@0.14913,NHLF@0.958807,SKNSHRA@0.077824, 0 0 0 0 ENSG00000240859.1 ENST00000471299.1 chr7:149778-153938 2 883 3275 intergenic 7.09 0 0,1,0 1 0,0,0 0 0 0 0 0.98442748091603 0 0 2.42748091603053 0 0 0 chimp,human,macaque,marmoset,orangutan, lincRNA processed_transcript A549@0.087414,AG04450@0.295015,BJ@1.16256,GM12878@0.0015705,H1HESC@0.172411,HELAS3@0.045592,HEPG2@0.007933,HMEC@0.213723,HSMM@0.0650205,HUVEC@0.103049,K562@0.006999,MCF7@0.681658,NHEK@0.14913,NHLF@0.958807,SKNSHRA@0.077824, 0 0 0 0 ENSG00000240859.1 ENST00000492208.1 chr7:152679-153823 2 551 591 intergenic 7.09 0 0,1,0 0 0,0,0 0 0 0 0 0 3.224 0 0 7.95 0 0 chimp,human,macaque,marmoset,orangutan, lincRNA processed_transcript A549@0.087414,AG04450@0.295015,BJ@1.16256,GM12878@0.0015705,H1HESC@0.172411,HELAS3@0.045592,HEPG2@0.007933,HMEC@0.213723,HSMM@0.0650205,HUVEC@0.103049,K562@0.006999,MCF7@0.681658,NHEK@0.14913,NHLF@0.958807,SKNSHRA@0.077824, 0 0 0 0 ENSG00000239715.1 ENST00000497017.1 chr7:174920-176013 3 565 524 intergenic 13.55 0 0,1,0 0 0,0,0 0 0 5.434 11.7964601769912 0 37.405 15.0318584070796 0 41.503 0 0 chimp,human,macaque,marmoset,mouse,orangutan,panda,rat, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000240093.1 ENST00000467050.1 chr7:182935-194180 3 571 10670 intronic 4.92 0 0,0,1 0 0,0,0 0 10.6903467666354 22.576 0 22.9 14.618 0 25.6073102155576 14.9 0 0 chimp,cow,human, antisense antisense A549@0,AG04450@0.037188,BJ@0,GM12878@0,H1HESC@0.0094885,HELAS3@0.045607,HEPG2@0.015313,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0.003582,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000248767.1 ENST00000510017.1 chr7:331310-334388 2 528 2548 intergenic -0.07 1 0,1,0 0 0,0,1 0 38.7904238618524 124.228 25.1912878787879 30.1824960753532 177.321 57.9166666666667 66.7335164835165 193.406 0 0 chimp,dog,guinea_pig,horse,human,macaque,marmoset,orangutan, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0.0042885, 0 0 0 0 ENSG00000249574.1 ENST00000515213.1 chr7:419325-422678 3 2143 1206 intergenic 5.73 0 0,0,0 0 0,0,0 0 0 0 0 0 0 0 7.33830845771144 0 1 1 chimp,human,macaque,marmoset,orangutan, lincRNA processed_transcript A549@0,AG04450@0,BJ@0.047136,GM12878@0.003116,H1HESC@0.353758,HELAS3@0.0024735,HEPG2@0.0020275,HMEC@0.00954,HSMM@0.022335,HUVEC@0.127383,K562@0,MCF7@0,NHEK@0.00423567,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000234471.1 ENST00000434541.1 chr7:523744-535755 3 417 11590 intergenic -0.02 0 0,0,0 0 0,0,0 87.9496402877698 5.69585849870578 0 55.1558752997602 6.10094909404659 0 131.94964028777 18.2843830888697 9.872 0 0 cow,dog,elephant,guinea_pig,human,macaque,marmoset,opossum,orangutan,panda,rat, lincRNA lincRNA A549@0.039511,AG04450@0.015355,BJ@0.007705,GM12878@0.033534,H1HESC@0.122573,HELAS3@0.025276,HEPG2@0.0909245,HMEC@0.009749,HSMM@0,HUVEC@0,K562@0,MCF7@0.214225,NHEK@0.0682197,NHLF@0,SKNSHRA@0.043908, 0 0 0 0 ENSG00000223855.1 ENST00000452622.1 chr7:560028-564869 3 3503 1334 intergenic 6.73 0 0,1,1 0 0,0,0 14.0393948044533 10.0329835082459 206.429 33.9314872966029 26.0052473763118 225.244 38.8133028832429 25.763868065967 288.911 0 0 human,macaque,panda,pig, lincRNA processed_transcript A549@0.152215,AG04450@0.023881,BJ@0.142034,GM12878@0.085925,H1HESC@0.123019,HELAS3@0.215799,HEPG2@0.035275,HMEC@0.108436,HSMM@0.0608925,HUVEC@0.19895,K562@0.106999,MCF7@0.244943,NHEK@0.0528893,NHLF@0.0226085,SKNSHRA@0.1861, 0 0 0 0 ENSG00000229380.1 ENST00000453149.1 chr7:601595-605256 2 570 3089 intronic 5.39 0 0,0,0 0 0,0,0 0 0 0 0 0 7.364 0 13.0058271285206 35.075 0 0 human,macaque, antisense antisense A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0.215905,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0.007947, 0 0 0 0 ENSG00000237181.1 ENST00000429872.1 chr7:642822-648119 2 729 4566 intronic 8.49 0 1,1,1 0 0,0,0 0 2.26456416995182 0 0 11.1038107752957 0 0 17.8572054314498 0 0 0 chimp,human,macaque,marmoset,orangutan, antisense antisense A549@0,AG04450@0.0064435,BJ@0,GM12878@7.25429,H1HESC@0.0113515,HELAS3@0.057101,HEPG2@0.023811,HMEC@0,HSMM@0.386707,HUVEC@0.982565,K562@5.44419,MCF7@0,NHEK@0,NHLF@0.0105585,SKNSHRA@0.326453, 0 0 0 0 ENSG00000225146.1 ENST00000418941.1 chr7:1068661-1083527 2 533 14331 intronic 3.55 0 0,1,0 0 0,0,0 0 0 7.26 0 0.844183936919964 28.244 0 45.9743214011583 26.681 0 0 chimp,human,macaque,marmoset,orangutan, antisense antisense A549@0.012608,AG04450@0,BJ@0.0092035,GM12878@0.0492655,H1HESC@0.0310095,HELAS3@0.026815,HEPG2@0.0050985,HMEC@0,HSMM@0,HUVEC@0,K562@0.0290585,MCF7@0.129656,NHEK@0,NHLF@0,SKNSHRA@0.139397, 0 0 0 0 ENSG00000224079.1 ENST00000449721.1 chr7:1114086-1117672 3 866 2716 intronic 3.84 0 0,0,1 0 0,0,0 0 0 0 0 0 0 3.08660508083141 0 0 0 0 chimp,human,macaque,marmoset,orangutan, antisense antisense A549@0,AG04450@0,BJ@0,GM12878@0.0215785,H1HESC@0,HELAS3@0,HEPG2@0.020229,HMEC@0.047119,HSMM@0,HUVEC@0,K562@0,MCF7@0.004627,NHEK@0.006077,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000226291.1 ENST00000415656.1 chr7:1120499-1121814 2 300 1013 intronic 0.08 0 0,1,1 0 0,0,0 0 0 0 0 0 4.063 26.7633333333333 0 4.131 0 0 cat,chimp,dog,horse,human,macaque,marmoset,orangutan, antisense antisense A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0.013558,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000229043.1 ENST00000436304.1 chr7:1199662-1200395 2 555 176 exonic 0 0 0,1,1 0 0,0,0 0 0 0 2.75675675675676 0 0 7.5027027027027 0 37.009 0 0 chimp,dog,human,macaque,marmoset,orangutan, antisense antisense A549@2.24696,AG04450@1.79885,BJ@2.2852,GM12878@1.02646,H1HESC@1.158,HELAS3@3.5309,HEPG2@1.90916,HMEC@1.50062,HSMM@2.13946,HUVEC@1.69108,K562@1.14024,MCF7@3.09573,NHEK@1.23112,NHLF@1.37569,SKNSHRA@3.08608, 0 0 0 0 ENSG00000229043.1 ENST00000423008.1 chr7:1200010-1204903 3 1398 3491 intergenic 5.91 0 1,1,1 1 0,0,0 0 0 0 0 0 1.53 0 0 41.173 0 0 chimp,human,orangutan, antisense antisense A549@2.24696,AG04450@1.79885,BJ@2.2852,GM12878@1.02646,H1HESC@1.158,HELAS3@3.5309,HEPG2@1.90916,HMEC@1.50062,HSMM@2.13946,HUVEC@1.69108,K562@1.14024,MCF7@3.09573,NHEK@1.23112,NHLF@1.37569,SKNSHRA@3.08608, 0 0 0 0 ENSG00000229043.1 ENST00000422230.1 chr7:1200130-1204211 2 543 3536 intergenic 0.22 0 0,1,0 1 0,0,0 0 0 0 0 0 1.53 0 0 41.173 0 0 chimp,human,orangutan, antisense antisense A549@2.24696,AG04450@1.79885,BJ@2.2852,GM12878@1.02646,H1HESC@1.158,HELAS3@3.5309,HEPG2@1.90916,HMEC@1.50062,HSMM@2.13946,HUVEC@1.69108,K562@1.14024,MCF7@3.09573,NHEK@1.23112,NHLF@1.37569,SKNSHRA@3.08608, 0 0 0 0 ENSG00000229043.1 ENST00000413706.1 chr7:1200227-1203127 5 669 2223 intergenic 1.14 0 0,1,0 1 0,0,0 0 0 0 0 0 1.53 0 0 20.161 0 0 chimp,human,orangutan, antisense antisense A549@2.24696,AG04450@1.79885,BJ@2.2852,GM12878@1.02646,H1HESC@1.158,HELAS3@3.5309,HEPG2@1.90916,HMEC@1.50062,HSMM@2.13946,HUVEC@1.69108,K562@1.14024,MCF7@3.09573,NHEK@1.23112,NHLF@1.37569,SKNSHRA@3.08608, 0 0 0 0 ENSG00000233082.1 ENST00000453798.1 chr7:1306989-1308903 2 431 1481 intergenic -3.38 0 0,1,0 0 0,0,0 392.749419953596 45.0067521944632 0 520.835266821346 59.3828494260635 0 579.570765661253 88.0729237002026 234.784 0 0 cat,chimp,cow,dog,elephant,horse,human,macaque,marmoset,mouse,opossum,orangutan,panda,pig,platypus,rabbit,rat, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000225981.1 ENST00000445345.1 chr7:1499573-1503644 2 496 3573 intergenic 0.05 0 0,1,1 0 0,0,0 0 0 39.712 0 0 88.91 0 0.748110831234257 98.732 0 0 chimp,human,macaque,marmoset,orangutan, antisense antisense A549@0,AG04450@0.040639,BJ@0.078678,GM12878@0.0759845,H1HESC@0.011935,HELAS3@0,HEPG2@0.060614,HMEC@0.016444,HSMM@0.0841395,HUVEC@0.0453525,K562@0.248382,MCF7@0,NHEK@0.0643737,NHLF@0.007836,SKNSHRA@0.167278, 0 0 0 0 ENSG00000231927.1 ENST00000416100.1 chr7:1548291-1549063 2 240 530 intergenic 0 0 0,0,1 0 0,0,0 0 0 0 0 0 0 0 0 0 0 0 human,macaque, antisense antisense A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0.020625,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000241340.1 ENST00000421996.1 chr7:1583466-1585415 2 407 1540 intergenic -6.78 0 0,0,0 0 0,0,1 0 0 0 0 0 0 0 0.946753246753247 12.131 0 0 chimp,human,macaque,marmoset,orangutan, antisense antisense A549@0,AG04450@0.00226,BJ@0,GM12878@0,H1HESC@0,HELAS3@0.101489,HEPG2@0.138773,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000230487.3 ENST00000437621.2 chr7:1609709-1629262 4 5697 13850 intronic 5.91 1 0,1,0 1 0,0,0 9.52501316482359 4.12389891696751 18.164 10.4149552395998 0.978916967509025 56.426 18.0275583640513 1.7602166064982 73.812 0 0 chimp,human, lincRNA processed_transcript A549@0.522921,AG04450@0.398684,BJ@0.778444,GM12878@0.135051,H1HESC@0.673283,HELAS3@0.145287,HEPG2@0.22485,HMEC@1.00354,HSMM@1.8814,HUVEC@1.05597,K562@0.196118,MCF7@3.56017,NHEK@0.344728,NHLF@0.516545,SKNSHRA@4.01939, 0 0 0 0 ENSG00000230487.3 ENST00000457484.2 chr7:1609725-1629257 6 3833 15689 exonic 5.91 1 0,1,0 1 0,0,0 0 7.0992415067882 18.164 0 4.64605774746638 56.426 0 8.1000701128179 73.812 0 1 chimp,human,orangutan, lincRNA processed_transcript A549@0.522921,AG04450@0.398684,BJ@0.778444,GM12878@0.135051,H1HESC@0.673283,HELAS3@0.145287,HEPG2@0.22485,HMEC@1.00354,HSMM@1.8814,HUVEC@1.05597,K562@0.196118,MCF7@3.56017,NHEK@0.344728,NHLF@0.516545,SKNSHRA@4.01939, 0 0 0 0 ENSG00000230487.3 ENST00000437964.1 chr7:1609771-1626181 5 2661 13741 intronic 5.91 0 1,1,1 1 0,0,0 0 4.15661160032021 18.164 0 0.986682191980205 52.071 6.31867718902668 1.77417946292118 66.732 0 0 chimp,human,macaque,orangutan, lincRNA processed_transcript A549@0.522921,AG04450@0.398684,BJ@0.778444,GM12878@0.135051,H1HESC@0.673283,HELAS3@0.145287,HEPG2@0.22485,HMEC@1.00354,HSMM@1.8814,HUVEC@1.05597,K562@0.196118,MCF7@3.56017,NHEK@0.344728,NHLF@0.516545,SKNSHRA@4.01939, 0 0 0 0 ENSG00000230487.3 ENST00000533935.1 chr7:1609778-1624054 5 537 13731 intronic 0.30 0 1,1,1 1 0,0,0 0 4.15963877357804 18.164 0 0.987400771975821 51.736 0 1.77547156070206 63.428 1 1 chimp,human,macaque,marmoset,orangutan, lincRNA processed_transcript A549@0.522921,AG04450@0.398684,BJ@0.778444,GM12878@0.135051,H1HESC@0.673283,HELAS3@0.145287,HEPG2@0.22485,HMEC@1.00354,HSMM@1.8814,HUVEC@1.05597,K562@0.196118,MCF7@3.56017,NHEK@0.344728,NHLF@0.516545,SKNSHRA@4.01939, 0 0 0 0 ENSG00000230487.3 ENST00000532358.1 chr7:1609782-1622867 5 568 12509 intronic 0.30 0 0,1,0 1 0,0,0 0 4.5659924854105 18.164 0 1.08385962107283 51.736 0 1.94891677991846 61.54 1 1 chimp,human,macaque,marmoset,orangutan, lincRNA processed_transcript A549@0.522921,AG04450@0.398684,BJ@0.778444,GM12878@0.135051,H1HESC@0.673283,HELAS3@0.145287,HEPG2@0.22485,HMEC@1.00354,HSMM@1.8814,HUVEC@1.05597,K562@0.196118,MCF7@3.56017,NHEK@0.344728,NHLF@0.516545,SKNSHRA@4.01939, 0 0 0 0 ENSG00000230487.3 ENST00000524978.1 chr7:1609870-1615607 3 377 5356 intronic 0.30 0 0,1,1 1 0,0,0 0 5.72554144884242 6.692 0 1.5067214339059 27.066 0 1.60156833457804 32.53 0 1 human,macaque,marmoset, lincRNA retained_intron A549@0.522921,AG04450@0.398684,BJ@0.778444,GM12878@0.135051,H1HESC@0.673283,HELAS3@0.145287,HEPG2@0.22485,HMEC@1.00354,HSMM@1.8814,HUVEC@1.05597,K562@0.196118,MCF7@3.56017,NHEK@0.344728,NHLF@0.516545,SKNSHRA@4.01939, 0 0 0 0 ENSG00000231476.1 ENST00000421380.1 chr7:1660290-1661041 2 435 314 intergenic -7.51 0 0,0,1 0 0,0,0 0 0 0 0 0 0 0 0 0 0 0 chimp,human,marmoset,orangutan, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0.0543475,MCF7@0,NHEK@0.074482,NHLF@0,SKNSHRA@0.0534865, 0 0 0 0 ENSG00000234977.1 ENST00000450458.1 chr7:1731542-1732086 2 452 90 intergenic 3.77 0 0,0,0 0 0,0,0 0 0 0 5.07743362831858 0 0 29.9579646017699 0 1.295 0 0 cat,chimp,dog,elephant,guinea_pig,horse,human,macaque,marmoset,orangutan,panda, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000225968.3 ENST00000424383.1 chr7:1748724-1784787 2 1011 35050 intergenic 1.80 0 0,0,0 0 0,0,1 259.127596439169 6.09235378031384 0 275.057368941642 9.48425106990014 0 364.193867457962 14.6714407988588 0 0 0 cat,chimp,cow,dog,elephant,guinea_pig,horse,human,macaque,marmoset,mouse,opossum,orangutan,panda,pig,platypus,rabbit,rat, lincRNA lincRNA A549@0.0755235,AG04450@0.0796425,BJ@0.907103,GM12878@0.043558,H1HESC@2.9708,HELAS3@0.671972,HEPG2@0.523516,HMEC@0.02058,HSMM@0.0161305,HUVEC@0.270856,K562@0.150168,MCF7@0.274635,NHEK@0.097182,NHLF@0.189947,SKNSHRA@5.723, 0 0 0 0 ENSG00000236081.1 ENST00000453348.1 chr7:1778266-1781908 2 635 3005 intergenic 3.95 0 1,1,1 1 0,0,0 16.0125984251968 1.07287853577371 39.321 29.1842519685039 4.12179700499168 52.059 45.7889763779528 15.0792013311148 64.188 0 0 chimp,horse,human,macaque,marmoset,orangutan,panda, lincRNA lincRNA A549@0.003413,AG04450@0,BJ@0,GM12878@0.224994,H1HESC@0,HELAS3@2.88795,HEPG2@1.67936,HMEC@0,HSMM@0,HUVEC@0.103191,K562@1.39712,MCF7@0.009544,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000236081.1 ENST00000415399.1 chr7:1778619-1781927 2 634 2672 intergenic 0 0 0,1,0 1 0,0,0 16.0378548895899 1.20658682634731 39.321 29.2302839116719 4.63547904191617 52.059 45.0694006309148 16.9584580838323 64.188 0 0 chimp,dog,human,macaque,marmoset,orangutan,panda, lincRNA lincRNA A549@0.003413,AG04450@0,BJ@0,GM12878@0.224994,H1HESC@0,HELAS3@2.88795,HEPG2@1.67936,HMEC@0,HSMM@0,HUVEC@0.103191,K562@1.39712,MCF7@0.009544,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000225968.3 ENST00000541472.1 chr7:1784233-1786719 2 2419 65 intergenic -15.04 0 0,0,0 0 0,0,1 298.500206696982 0 8.58 407.879702356346 275.938461538462 3.51 514.771806531625 372.846153846154 9.067 0 0 chimp,cow,dog,elephant,guinea_pig,horse,human,macaque,marmoset,mouse,opossum,orangutan,panda,pig,platypus,rabbit,rat, lincRNA lincRNA A549@0.0755235,AG04450@0.0796425,BJ@0.907103,GM12878@0.043558,H1HESC@2.9708,HELAS3@0.671972,HEPG2@0.523516,HMEC@0.02058,HSMM@0.0161305,HUVEC@0.270856,K562@0.150168,MCF7@0.274635,NHEK@0.097182,NHLF@0.189947,SKNSHRA@5.723, 0 0 0 0 ENSG00000227990.1 ENST00000428925.1 chr7:1881252-1881812 2 335 223 intronic 0.27 0 0,0,1 0 0,0,0 144.134328358209 0 5.328 130.411940298507 0 7.62 253.680597014925 0 27.126 0 0 cat,chimp,cow,elephant,human,macaque,marmoset,mouse,orangutan,panda,pig,rat, antisense antisense A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0.00552,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 189 2 122 2 ENSG00000230914.2 ENST00000443103.1 chr7:2423756-2428232 2 606 3868 intergenic -3.36 0 0,0,0 0 0,0,0 0 0 0 40.960396039604 1.64322647362978 13.26 57.539603960396 1.7246639089969 17.756 0 0 chimp,dog,horse,human,macaque,marmoset,orangutan, lincRNA lincRNA A549@0.041727,AG04450@0.010607,BJ@0.0235385,GM12878@0.05257,H1HESC@0.006824,HELAS3@0.125263,HEPG2@0.247328,HMEC@0,HSMM@0.159996,HUVEC@0.0177875,K562@0.034059,MCF7@0.103586,NHEK@0.0406907,NHLF@0,SKNSHRA@0.0149525, 0 0 0 0 ENSG00000175873.3 ENST00000313156.3 chr7:2477398-2487485 2 2065 8020 intergenic 2.34 1 0,0,1 0 0,0,0 0 1.37793017456359 0 2.62615012106538 0 0 2.64261501210654 0 0 0 0 chimp,human,marmoset,orangutan, lincRNA lincRNA A549@0.249065,AG04450@0.335447,BJ@0.417179,GM12878@0.48717,H1HESC@0.481936,HELAS3@0.589802,HEPG2@0.766523,HMEC@0.548697,HSMM@0.26489,HUVEC@0.620702,K562@0.282597,MCF7@0.603862,NHEK@0.369253,NHLF@0.465329,SKNSHRA@0.656959, 0 0 0 0 ENSG00000236734.2 ENST00000420313.1 chr7:2514360-2516017 5 574 1075 intergenic 10.68 0 0,0,1 0 0,0,0 11.1149825783972 0.409302325581395 0 209.768292682927 8.52279069767442 15.143 222.386759581882 8.93488372093023 7.801 0 0 cat,chimp,cow,dog,elephant,guinea_pig,horse,human,macaque,marmoset,mouse,orangutan,panda,pig,rat, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000236734.2 ENST00000417742.1 chr7:2515065-2516528 3 645 814 intergenic 4.88 0 0,1,0 0 0,0,0 0 0 0 103.899224806202 6.48034398034398 15.143 113.108527131783 7.07371007371007 7.801 0 0 cat,chimp,dog,elephant,guinea_pig,horse,human,macaque,marmoset,opossum,orangutan,pig,platypus,rat, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000228246.1 ENST00000412266.1 chr7:2757467-2762622 2 3286 1867 intergenic 8.40 0 0,0,0 0 0,0,0 0 0 0 0 0 0 1.70085209981741 19.2844134975897 0 0 0 chimp,human,orangutan, lincRNA processed_transcript A549@0.22165,AG04450@0.211628,BJ@0.155226,GM12878@0.154914,H1HESC@0.351114,HELAS3@0.178841,HEPG2@0.261463,HMEC@0.210415,HSMM@0.15262,HUVEC@0.193672,K562@0.106957,MCF7@0.177302,NHEK@0.15611,NHLF@0.142501,SKNSHRA@0.34109, 0 0 0 0 ENSG00000233202.1 ENST00000433945.1 chr7:2804242-2815134 2 542 10348 intronic 6.16 0 0,0,0 0 0,0,0 0 0 0 0 0 0 24.6605166051661 1.26507537688442 0 0 0 chimp,dog,guinea_pig,horse,human,macaque,marmoset, processed_transcript processed_transcript A549@0,AG04450@0,BJ@0.0264345,GM12878@0.0270315,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0.227147,NHEK@0,NHLF@0.007655,SKNSHRA@0, 0 0 0 0 ENSG00000237286.1 ENST00000423194.1 chr7:2983669-2986725 2 967 2087 exonic 3.91 0 0,0,0 0 0,0,0 179.859358841779 59.3243890752276 0 209.624612202689 45.5505510301869 0 227.766287487073 47.8696693818879 0 0 0 chimp,dog,guinea_pig,horse,human,macaque,orangutan,panda, antisense antisense A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000228334.1 ENST00000437145.1 chr7:3122886-3126055 2 435 2732 intergenic -18.27 0 0,0,0 0 0,0,0 75.3287356321839 51.1153001464129 19.71 76.6735632183908 15.0219619326501 37.63 111.48275862069 32.2141288433382 35.896 0 0 cat,chimp,cow,dog,elephant,horse,human,macaque,marmoset,mouse,opossum,orangutan,panda,platypus,rabbit, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0.0068005,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000231892.1 ENST00000414126.1 chr7:3236258-3237888 3 415 1211 intergenic 4.89 0 0,1,0 0 0,0,0 39.7373493975904 0 0 0 0 0 0 0 0 0 0 chimp,cow,elephant,horse,human,macaque,marmoset,orangutan, lincRNA lincRNA A549@0,AG04450@0.0141645,BJ@0,GM12878@0,H1HESC@0.0782055,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0.170661,NHEK@0.00315833,NHLF@0.004616,SKNSHRA@0, 0 0 0 0 ENSG00000236708.1 ENST00000437354.1 chr7:3303664-3342084 2 980 37438 intronic -6.21 0 0,1,0 0 0,0,0 70.4724489795918 18.1968320957316 38.865 29.6969387755102 16.0516854532828 22.418 61.9489795918367 16.979379240344 16.758 0 0 cat,chimp,cow,dog,elephant,guinea_pig,horse,human,macaque,marmoset,orangutan,panda, antisense antisense A549@0,AG04450@0.0726955,BJ@0,GM12878@0,H1HESC@0.0347315,HELAS3@0.034005,HEPG2@0.035174,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0.120323,NHEK@0,NHLF@0.047687,SKNSHRA@0.0218445, 0 0 0 0 ENSG00000236510.1 ENST00000427920.1 chr7:3682447-3683416 2 854 113 intronic -6.71 0 0,0,0 0 0,0,0 0 0 0 0 0 0 70.9976580796253 374.265486725664 41.429 0 0 chimp,human,orangutan, antisense antisense A549@0,AG04450@0,BJ@0.0264635,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000241269.1 ENST00000342963.2 chr7:5459458-5460398 2 581 357 exonic -1.79 0 0,1,0 0 0,0,0 7.2289156626506 0 36.892 4.16867469879518 0 27.077 0 0 29.298 0 0 chimp,cow,dog,elephant,horse,human,orangutan,pig, antisense antisense A549@0,AG04450@0.008079,BJ@0.015011,GM12878@0.0069155,H1HESC@0.0035585,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0.00391,HUVEC@0.0342865,K562@0,MCF7@0.0034485,NHEK@0.0201957,NHLF@0.003347,SKNSHRA@0.013185, 0 0 0 0 ENSG00000188365.3 ENST00000455866.1 chr7:5459477-5462753 2 751 2523 exonic 6.73 0 0,1,1 0 0,0,0 64.4980026631158 146.709076496235 36.489 136.423435419441 155.086405073325 29.845 143.924101198402 135.61355529132 29.298 0 0 dog,horse,human,macaque,pig, antisense antisense A549@0,AG04450@0.004282,BJ@0.006152,GM12878@0,H1HESC@0,HELAS3@0.01663,HEPG2@0.00961,HMEC@0.164753,HSMM@0,HUVEC@0.024059,K562@0,MCF7@0.026209,NHEK@0,NHLF@0.0025625,SKNSHRA@0.004873, 0 0 0 0 ENSG00000230733.2 ENST00000444210.2 chr7:5515435-5519442 2 3249 756 exonic 2.77 0 0,1,0 0 0,0,0 23.6769230769231 0 0 21.9603076923077 0 0 36.4101538461538 0 0.284 0 0 chimp,human,macaque, antisense antisense A549@0.002075,AG04450@0.0039675,BJ@0,GM12878@0.0034325,H1HESC@0.0161135,HELAS3@0.023858,HEPG2@0.0654455,HMEC@0,HSMM@0.0023015,HUVEC@0.003793,K562@0,MCF7@0.008364,NHEK@0.00220333,NHLF@0.032483,SKNSHRA@0.005593, 0 0 0 0 ENSG00000234708.2 ENST00000440855.2 chr7:5553485-5565173 5 1562 10118 intergenic 11.70 0 0,1,0 0 0,0,0 0 0 0 4.55825864276568 0 32.603 4.58386683738796 73.2970942874086 37.109 0 1 chimp,human,marmoset,orangutan, lincRNA lincRNA A549@0.015684,AG04450@0.007894,BJ@0.041303,GM12878@0.106434,H1HESC@0.07045,HELAS3@0.161931,HEPG2@0.22972,HMEC@0.007839,HSMM@0,HUVEC@0.026276,K562@0.004874,MCF7@0.0083275,NHEK@0.00417733,NHLF@0.0037355,SKNSHRA@0.129245, 0 0 0 0 ENSG00000237738.1 ENST00000443837.1 chr7:5702063-5720092 3 334 17691 intronic 0 0 0,0,0 0 0,0,0 0 0.509863772539709 0 0 1.28986490305805 0 0 19.1812220903284 0 0 0 chimp,human,macaque,marmoset,orangutan,rabbit, sense_intronic sense_intronic A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000231704.1 ENST00000436915.1 chr7:6120734-6124887 3 521 3628 intergenic 0 0 0,0,0 0 0,0,0 0 0 0 0 0.637265711135612 6.453 0 0.637265711135612 6.777 0 0 chimp,cow,dog,human,macaque,marmoset,orangutan, lincRNA lincRNA A549@0.0604115,AG04450@0,BJ@0,GM12878@0.0054155,H1HESC@0.0324925,HELAS3@0.0819545,HEPG2@0.0373985,HMEC@0,HSMM@0,HUVEC@0,K562@0.00861,MCF7@0.0038075,NHEK@0,NHLF@0.003573,SKNSHRA@0.0354535, 0 0 0 0 ENSG00000231704.1 ENST00000435547.1 chr7:6120734-6132683 4 543 11400 intergenic 2.53 0 0,0,0 0 0,0,0 0 0 0 0 1.73105263157895 6.453 0 1.79114035087719 6.777 0 0 cow,dog,human,macaque,marmoset,orangutan, lincRNA lincRNA A549@0.0604115,AG04450@0,BJ@0,GM12878@0.0054155,H1HESC@0.0324925,HELAS3@0.0819545,HEPG2@0.0373985,HMEC@0,HSMM@0,HUVEC@0,K562@0.00861,MCF7@0.0038075,NHEK@0,NHLF@0.003573,SKNSHRA@0.0354535, 0 0 0 0 ENSG00000231704.1 ENST00000428901.1 chr7:6121302-6132716 4 536 10872 intergenic 2.53 0 0,1,0 0 0,0,0 0 0 0 0 1.60246504782929 2.312 0 1.66547093451067 2.312 0 0 human,macaque,marmoset,orangutan, lincRNA lincRNA A549@0.0604115,AG04450@0,BJ@0,GM12878@0.0054155,H1HESC@0.0324925,HELAS3@0.0819545,HEPG2@0.0373985,HMEC@0,HSMM@0,HUVEC@0,K562@0.00861,MCF7@0.0038075,NHEK@0,NHLF@0.003573,SKNSHRA@0.0354535, 0 0 0 0 ENSG00000232581.1 ENST00000434951.1 chr7:6618196-6628605 2 355 10052 exonic 0.86 0 1,1,1 0 0,0,0 26.3380281690141 14.9576203740549 0 89.4056338028169 16.4097692001592 3.315 120.397183098592 23.4129526462396 3.458 0 0 cat,chimp,cow,dog,elephant,guinea_pig,horse,human,macaque,marmoset,mouse,orangutan,panda,rabbit,rat, antisense antisense A549@0,AG04450@0.050863,BJ@0.0338925,GM12878@0.026263,H1HESC@0.016304,HELAS3@0.0901915,HEPG2@0.020396,HMEC@0.01147,HSMM@0.0063855,HUVEC@0,K562@0.006504,MCF7@0.0056315,NHEK@0,NHLF@0.0163965,SKNSHRA@0.020511, 0 0 0 0 ENSG00000236609.2 ENST00000457543.2 chr7:6655248-6661180 3 1113 4815 intergenic 9.26 0 0,1,1 1 0,0,1 45.1599281221923 0.683696780893043 43.248 93.9928122192273 4.39460020768432 49.298 122.18688230009 32.9084112149533 92.618 0 0 cat,chimp,cow,dog,elephant,guinea_pig,human,marmoset,mouse,orangutan,panda,rabbit,rat, lincRNA lincRNA A549@1.84777,AG04450@4.2287,BJ@1.39843,GM12878@0.161183,H1HESC@2.8673,HELAS3@1.2829,HEPG2@4.57531,HMEC@0,HSMM@1.66692,HUVEC@0.42554,K562@0.0200855,MCF7@0.289649,NHEK@0.00228767,NHLF@0.106495,SKNSHRA@21.2715, 0 0 0 0 ENSG00000228010.1 ENST00000413182.1 chr7:6703605-6705152 2 546 999 intergenic 4.32 0 0,0,1 1 0,0,0 0 0 0 4.996336996337 0 1.736 10.0805860805861 0 14.037 0 1 chimp,human,macaque,orangutan, processed_transcript retained_intron A549@0.0420505,AG04450@0.0699965,BJ@0.0248315,GM12878@0.0480595,H1HESC@0.116732,HELAS3@0.092639,HEPG2@0.192358,HMEC@0,HSMM@0.0205565,HUVEC@0.0181545,K562@0.016705,MCF7@0.010983,NHEK@0.00531567,NHLF@0.02562,SKNSHRA@0.198275, 0 0 0 0 ENSG00000228010.1 ENST00000430844.1 chr7:6703605-6713232 3 529 9094 intergenic -7.06 0 0,0,0 1 0,0,0 0 3.15372773257093 0 9.63137996219282 0 1.736 21.0359168241966 4.51187596217286 14.037 0 0 cat,chimp,cow,dog,elephant,horse,human,macaque,marmoset,orangutan,panda,pig,rabbit, processed_transcript processed_transcript A549@0.0420505,AG04450@0.0699965,BJ@0.0248315,GM12878@0.0480595,H1HESC@0.116732,HELAS3@0.092639,HEPG2@0.192358,HMEC@0,HSMM@0.0205565,HUVEC@0.0181545,K562@0.016705,MCF7@0.010983,NHEK@0.00531567,NHLF@0.02562,SKNSHRA@0.198275, 0 0 0 0 ENSG00000228010.1 ENST00000366167.2 chr7:6703605-6748532 4 560 44361 encompassing 1.04 0 0,0,0 1 0,0,0 0 30.1006965577872 0 4.87142857142857 14.605509343793 1.736 9.82857142857143 28.8488311805415 14.037 0 0 chimp,human,macaque,marmoset,orangutan, processed_transcript processed_transcript A549@0.0420505,AG04450@0.0699965,BJ@0.0248315,GM12878@0.0480595,H1HESC@0.116732,HELAS3@0.092639,HEPG2@0.192358,HMEC@0,HSMM@0.0205565,HUVEC@0.0181545,K562@0.016705,MCF7@0.010983,NHEK@0.00531567,NHLF@0.02562,SKNSHRA@0.198275, 1 96 0 0 ENSG00000226150.1 ENST00000429267.1 chr7:6833765-6836573 2 567 2239 intronic 0.62 0 0,0,0 0 0,0,0 0 0 0 0 0 0 160.405643738977 4.08351942831621 0 0 0 chimp,human,orangutan, processed_transcript processed_transcript A549@0.169673,AG04450@0.0378545,BJ@0.196305,GM12878@0.112724,H1HESC@0.056242,HELAS3@0.0592055,HEPG2@0.370894,HMEC@0,HSMM@0.0356315,HUVEC@0.155617,K562@0.0281845,MCF7@0.47565,NHEK@0.087909,NHLF@0.0157315,SKNSHRA@0.013631, 0 0 0 0 ENSG00000230825.1 ENST00000430266.1 chr7:7294785-7317410 4 467 22152 intergenic 3.15 0 0,1,0 0 0,0,0 0 2.91580895630191 0 0 3.40366558324305 0 0 4.02342903575298 0 0 0 chimp,horse,human,macaque,marmoset,orangutan, lincRNA lincRNA A549@0.0507245,AG04450@0,BJ@0.0038655,GM12878@0.0236605,H1HESC@0,HELAS3@0.102115,HEPG2@0.136209,HMEC@0,HSMM@0.161655,HUVEC@0.034201,K562@0.01776,MCF7@0.0032845,NHEK@0.0956187,NHLF@0,SKNSHRA@0.0337075, 0 0 0 0 ENSG00000230825.1 ENST00000436578.1 chr7:7306539-7317355 2 673 10141 intergenic 3.15 0 0,0,0 0 0,0,0 0 3.70614337836505 0 0 5.07375998422246 0 0 6.05472833053939 0 1 1 chimp,human,macaque,marmoset,orangutan, lincRNA retained_intron A549@0.0507245,AG04450@0,BJ@0.0038655,GM12878@0.0236605,H1HESC@0,HELAS3@0.102115,HEPG2@0.136209,HMEC@0,HSMM@0.161655,HUVEC@0.034201,K562@0.01776,MCF7@0.0032845,NHEK@0.0956187,NHLF@0,SKNSHRA@0.0337075, 0 0 0 0 ENSG00000230825.1 ENST00000447039.1 chr7:7311039-7317404 2 624 5739 intergenic 3.15 0 0,0,0 0 0,0,0 0 6.5488761108207 0 0 8.54905035720509 2.39 0 9.49520822442934 2.59 0 0 chimp,horse,human,macaque,marmoset,orangutan, lincRNA lincRNA A549@0.0507245,AG04450@0,BJ@0.0038655,GM12878@0.0236605,H1HESC@0,HELAS3@0.102115,HEPG2@0.136209,HMEC@0,HSMM@0.161655,HUVEC@0.034201,K562@0.01776,MCF7@0.0032845,NHEK@0.0956187,NHLF@0,SKNSHRA@0.0337075, 0 0 0 0 ENSG00000234718.3 ENST00000418534.1 chr7:7778165-7781786 2 630 2989 intronic -11.12 0 0,0,0 0 0,0,0 0 2.20809635329542 0 0 1.54633656741385 5.802 60.7396825396825 1.61960521913684 335.098 0 0 cat,chimp,cow,dog,elephant,human,macaque,marmoset,orangutan,rabbit, processed_transcript processed_transcript A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000234141.1 ENST00000451066.1 chr7:7989484-7990340 2 690 164 intergenic 0.98 0 0,0,1 0 0,0,0 45.7536231884058 0 0 20.3913043478261 0 0 29.1608695652174 0 0 0 0 cat,chimp,cow,dog,elephant,guinea_pig,horse,human,macaque,marmoset,mouse,orangutan,panda,rabbit,rat, antisense antisense A549@0,AG04450@0.0470945,BJ@0.006994,GM12878@0.145027,H1HESC@0.003576,HELAS3@0.181625,HEPG2@0,HMEC@0.017751,HSMM@0.0155085,HUVEC@0,K562@0.0490295,MCF7@0.223307,NHEK@0,NHLF@0.030922,SKNSHRA@0.049214, 0 0 0 0 ENSG00000233108.1 ENST00000428660.1 chr7:7997814-8009534 2 566 11152 exonic -8.99 0 0,1,0 1 0,0,0 123.593639575972 16.6481348637016 189.874 134.240282685512 40.9972202295552 171.144 123.180212014134 51.9270982783357 189.444 0 0 chimp,elephant,human,macaque,marmoset,orangutan,pig, antisense antisense A549@0.0237505,AG04450@0.044486,BJ@0,GM12878@0.0351485,H1HESC@0.0102475,HELAS3@0.108985,HEPG2@0.0096045,HMEC@0,HSMM@0,HUVEC@0,K562@0.023568,MCF7@0.103008,NHEK@0,NHLF@0,SKNSHRA@0.036736, 0 0 0 0 ENSG00000227719.1 ENST00000449931.1 chr7:8153655-8156191 3 521 2011 exonic 3.34 0 0,1,0 0 0,0,0 38.3186180422265 7.31974142217802 77.923 104.236084452975 9.70213823968175 128.642 107.191938579655 11.7478866235704 134.578 0 0 chimp,cow,dog,elephant,guinea_pig,horse,human,pig, antisense antisense A549@0,AG04450@0.0061535,BJ@0.009397,GM12878@0.228854,H1HESC@0.02777,HELAS3@0.0130845,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0.005096,K562@0,MCF7@0.034879,NHEK@0.00754167,NHLF@0,SKNSHRA@0.051211, 0 0 0 0 ENSG00000244239.1 ENST00000458624.1 chr7:8301863-8302451 2 427 159 exonic -2.86 0 1,1,1 1 0,0,0 92.7400468384075 64.1509433962264 116.816 146.032786885246 182.811320754717 139.515 142.599531615925 181.106918238994 139.839 0 0 cat,chimp,cow,dog,elephant,guinea_pig,horse,human,macaque,marmoset,mouse,orangutan,panda,pig,rabbit,rat, lincRNA processed_transcript A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0.252759,HELAS3@0.0713375,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0.741294,K562@0,MCF7@0.209921,NHEK@0.0243003,NHLF@0,SKNSHRA@0.234407, 0 0 0 0 ENSG00000229970.2 ENST00000424460.1 chr7:8301894-8384146 7 1846 80394 exonic -0.32 0 0,1,0 1 0,0,0 197.342361863489 7.22933303480359 126.984 210.097508125677 11.1451600865736 154.798 192.962080173348 11.8558598900415 154.781 0 0 chimp,cow,horse,human,macaque,marmoset,orangutan, lincRNA processed_transcript A549@0.984789,AG04450@0,BJ@0,GM12878@0.001265,H1HESC@0.343423,HELAS3@0.005852,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0.0062745,K562@2.16182,MCF7@0.611648,NHEK@0,NHLF@0,SKNSHRA@0.400718, 0 0 0 0 ENSG00000229970.2 ENST00000435967.1 chr7:8343371-8380973 3 554 37044 intergenic -2.95 0 0,0,1 0 0,0,0 0 9.29716013389483 0 0 11.3418907245438 0 0 10.8695335276968 0 0 0 chimp,cow,horse,human,macaque,marmoset,orangutan,pig, lincRNA retained_intron A549@0.984789,AG04450@0,BJ@0,GM12878@0.001265,H1HESC@0.343423,HELAS3@0.005852,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0.0062745,K562@2.16182,MCF7@0.611648,NHEK@0,NHLF@0,SKNSHRA@0.400718, 0 0 0 0 ENSG00000234710.1 ENST00000447999.1 chr7:9776951-9809142 5 613 31570 intergenic -0.91 0 0,0,1 0 0,0,0 0 5.16148242001901 0 0 13.9122267975927 0 0 14.94269876465 0 0 0 chimp,horse,human,macaque,marmoset,orangutan, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0.0113645,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0.024718,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000235431.1 ENST00000451755.1 chr7:10000651-10021444 3 358 20431 intergenic -1.75 0 0,0,0 0 0,0,0 0 31.7793059566345 43.865 0 39.7944300327933 178.15 0 39.9682834907738 209.123 0 0 chimp,horse,human,macaque,marmoset,orangutan,panda, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000236414.1 ENST00000422697.1 chr7:10742303-10747033 2 447 4281 intergenic -8.48 0 0,0,0 0 0,0,0 35.3959731543624 0 0 52.4161073825503 0.390796542863817 0 60.5816554809843 1.0142490072413 0 0 0 chimp,cow,dog,elephant,guinea_pig,horse,human,macaque,marmoset,orangutan,panda,rabbit, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0.00294033,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000230333.1 ENST00000443459.1 chr7:11232993-11267456 4 548 33909 intergenic 4.43 0 0,0,0 0 0,0,0 22.2445255474453 14.4791943141939 0 2.78284671532847 15.5679613082073 0 10.9908759124088 14.6878114954732 0 0 1 human,macaque,orangutan, antisense retained_intron A549@0.0294805,AG04450@0.023822,BJ@0.0239645,GM12878@0.053454,H1HESC@0.046694,HELAS3@0,HEPG2@0.001047,HMEC@0,HSMM@0,HUVEC@0.0193505,K562@0.002364,MCF7@0.0146275,NHEK@0,NHLF@0.0240285,SKNSHRA@0.020243, 0 0 0 0 ENSG00000230333.1 ENST00000428967.1 chr7:11232993-11418993 5 572 185420 intronic 4.43 0 0,0,0 0 0,0,0 11.2097902097902 17.8905565742638 0 3.7027972027972 21.2656887067199 0 4.46853146853147 22.2726189192104 0 0 0 chimp,horse,human,macaque,marmoset,orangutan, antisense antisense A549@0.0294805,AG04450@0.023822,BJ@0.0239645,GM12878@0.053454,H1HESC@0.046694,HELAS3@0,HEPG2@0.001047,HMEC@0,HSMM@0,HUVEC@0.0193505,K562@0.002364,MCF7@0.0146275,NHEK@0,NHLF@0.0240285,SKNSHRA@0.020243, 0 0 0 0 ENSG00000230333.1 ENST00000441110.1 chr7:11236934-11361951 5 617 124392 intergenic 4.43 0 0,0,0 0 0,0,0 19.7568881685575 13.4446105858898 0 2.47163695299838 18.5733487684095 0 9.76175040518639 19.3544600938967 0 0 0 chimp,human,macaque,marmoset,orangutan, antisense antisense A549@0.0294805,AG04450@0.023822,BJ@0.0239645,GM12878@0.053454,H1HESC@0.046694,HELAS3@0,HEPG2@0.001047,HMEC@0,HSMM@0,HUVEC@0.0193505,K562@0.002364,MCF7@0.0146275,NHEK@0,NHLF@0.0240285,SKNSHRA@0.020243, 0 0 0 0 ENSG00000230333.1 ENST00000428533.1 chr7:11236934-11424045 3 840 186267 intronic 4.43 0 0,0,1 0 0,0,0 7.63333333333333 18.2861107979406 0 2.52142857142857 21.8708896369191 0 3.04285714285714 22.897324807937 0 0 0 chimp,cow,dog,horse,human,macaque,marmoset,orangutan,panda, antisense antisense A549@0.0294805,AG04450@0.023822,BJ@0.0239645,GM12878@0.053454,H1HESC@0.046694,HELAS3@0,HEPG2@0.001047,HMEC@0,HSMM@0,HUVEC@0.0193505,K562@0.002364,MCF7@0.0146275,NHEK@0,NHLF@0.0240285,SKNSHRA@0.020243, 0 0 0 0 ENSG00000230333.1 ENST00000445839.1 chr7:11292607-11559802 4 561 266628 intronic 2.14 0 0,1,0 0 0,0,0 11.4295900178253 18.2038195538353 0 3.77540106951872 23.7174152752149 0 4.55614973262032 24.1203849558185 0 0 0 chimp,dog,horse,human,macaque,marmoset,orangutan, antisense antisense A549@0.0294805,AG04450@0.023822,BJ@0.0239645,GM12878@0.053454,H1HESC@0.046694,HELAS3@0,HEPG2@0.001047,HMEC@0,HSMM@0,HUVEC@0.0193505,K562@0.002364,MCF7@0.0146275,NHEK@0,NHLF@0.0240285,SKNSHRA@0.020243, 0 0 0 0 ENSG00000230333.1 ENST00000421121.1 chr7:11292740-11425305 3 2075 130486 intronic 2.14 1 0,0,0 0 0,0,0 3.09012048192771 21.09685330227 0 1.02072289156627 25.2876323896817 0 1.23180722891566 26.535314133317 0 0 0 cat,chimp,cow,dog,horse,human,macaque,marmoset,orangutan,panda, antisense antisense A549@0.0294805,AG04450@0.023822,BJ@0.0239645,GM12878@0.053454,H1HESC@0.046694,HELAS3@0,HEPG2@0.001047,HMEC@0,HSMM@0,HUVEC@0.0193505,K562@0.002364,MCF7@0.0146275,NHEK@0,NHLF@0.0240285,SKNSHRA@0.020243, 0 0 0 0 ENSG00000230435.1 ENST00000425837.1 chr7:11446582-11453705 3 560 6559 exonic -2.04 0 0,0,1 0 0,0,0 99.2785714285714 34.5355999390151 108.236 111.110714285714 83.9452660466535 195.343 101.2375 73.8790974233877 122.821 0 0 chimp,human,marmoset,orangutan, antisense antisense A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0.00819033,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000226690.2 ENST00000418428.2 chr7:12536055-12581536 7 1087 44382 intergenic -1.12 0 0,1,0 0 0,0,0 17.6308539944904 1.15565570076611 0 27.6051423324151 2.41762054979721 0 43.9191919191919 8.19840018026138 0 0 0 cat,chimp,dog,elephant,horse,human,macaque,marmoset,orangutan,panda,rabbit, processed_transcript processed_transcript A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000226690.2 ENST00000443874.1 chr7:12544025-12568554 3 257 24268 intergenic 0 0 0,0,0 0 0,0,0 7.31906614785992 0.668122630624691 14.136 53.5019455252918 3.3689220372507 11.806 94.6926070038911 12.8917092467447 16.401 0 0 chimp,cow,dog,elephant,horse,human,macaque,marmoset,orangutan,panda,pig,rabbit, processed_transcript processed_transcript A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000226690.2 ENST00000424453.1 chr7:12544050-12580761 4 558 36147 intergenic -1.12 0 0,0,0 0 0,0,0 37.7795698924731 0.969983677760257 14.136 46.4426523297491 2.56245331562785 13.84 70.0967741935484 9.60148836694608 20.482 0 0 cat,chimp,cow,dog,elephant,horse,human,macaque,marmoset,mouse,orangutan,panda,pig,rabbit,rat, processed_transcript processed_transcript A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000225606.1 ENST00000433040.1 chr7:12609751-12611017 2 909 355 exonic -2.83 0 0,0,0 0 0,0,0 8.52695269526953 141.445070422535 26.04 28.8327832783278 138.019718309859 52.453 28.3949394939494 142.969014084507 52.823 0 0 chimp,cow,human,macaque,marmoset,orangutan,panda, antisense antisense A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0.0275895,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0.061625,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000229233.1 ENST00000437088.1 chr7:12693804-12694610 2 430 374 intergenic 0 0 0,1,0 0 0,0,0 0 0 0 0 0 2.683 0 0 2.809 0 0 chimp,elephant,horse,human,macaque,orangutan, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0.010852,H1HESC@0,HELAS3@0.016051,HEPG2@0.025257,HMEC@0,HSMM@0,HUVEC@0,K562@0.0231445,MCF7@0.023375,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000229618.1 ENST00000443947.1 chr7:13141016-13142014 2 573 423 intergenic -12.53 0 0,0,0 0 0,0,0 80.4537521815009 14.8936170212766 8.12 3.02966841186736 6.38297872340426 0 3.16404886561955 6.57210401891253 0 0 0 human, lincRNA lincRNA A549@0.0059015,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0.0614125, 3 10 0 0 ENSG00000229618.1 ENST00000411542.1 chr7:13141097-13743774 5 521 602148 intergenic -7.79 0 0,0,0 0 0,0,0 53.5508637236084 14.3866009685327 26.6 0 17.4355391033434 1.736 0 17.5489331526468 1.813 0 0 cat,chimp,cow,elephant,human,macaque,marmoset,orangutan, lincRNA lincRNA A549@0.0059015,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0.0614125, 0 0 0 0 ENSG00000237713.1 ENST00000456809.1 chr7:13378826-13404674 5 837 25003 intergenic 1.93 0 0,0,0 0 0,0,0 0 8.54225492940847 0 2.90322580645161 14.6383234011919 10.416 3.17204301075269 15.7317521897372 10.542 0 0 chimp,human,macaque,marmoset,orangutan,pig, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0.028678,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0.0026945, 0 0 0 0 ENSG00000224330.1 ENST00000434321.1 chr7:13893980-13898650 2 357 4311 intergenic 0 1 0,0,0 0 0,0,0 0 0 0 0 0 5.438 0 0 8.923 0 0 chimp,dog,guinea_pig,horse,human,macaque,marmoset,orangutan,panda,pig,rabbit, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0.0322485,SKNSHRA@0.050603, 0 0 0 0 ENSG00000226323.1 ENST00000412014.1 chr7:14853756-14856190 3 260 2170 intronic -10.78 0 0,0,1 0 0,0,0 0 0 0 0 0 4.199 0 0 4.329 0 0 chimp,dog,horse,human,macaque,marmoset,orangutan,panda, antisense antisense A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000227489.1 ENST00000445093.1 chr7:15105832-15108276 2 651 1791 intergenic -2.33 0 0,1,1 0 0,0,0 0 0 0 0 1.66164154103853 0 0 1.73534338358459 0 0 0 chimp,cow,dog,elephant,horse,human,macaque,marmoset,orangutan,panda,pig,rabbit,rat, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0.0134355,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000237070.1 ENST00000451240.1 chr7:15707572-15721605 4 3739 10288 intronic 2.03 1 0,0,0 0 0,0,0 0 27.5730948678072 0 6.27975394490506 27.2710925349922 0 6.4081305161808 27.6982892690513 0 0 0 chimp,cow,dog,elephant,guinea_pig,horse,human,macaque,marmoset,mouse,opossum,orangutan,panda,pig,rabbit,rat, lincRNA processed_transcript A549@0.007169,AG04450@0,BJ@0,GM12878@0.04132,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000229108.1 ENST00000442176.1 chr7:15728003-15735116 2 695 6416 intergenic 2.00 0 0,1,1 0 0,0,0 154.787050359712 45.7548316708229 155.184 156.677697841727 21.0001558603491 175.522 157.117985611511 18.4206670822943 152.845 0 0 cat,chimp,cow,dog,elephant,guinea_pig,horse,human,macaque,marmoset,mouse,orangutan,panda,pig,rabbit,rat, antisense antisense A549@0.0062285,AG04450@0,BJ@0,GM12878@0,H1HESC@0.0732355,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0.515311,K562@0,MCF7@0,NHEK@0,NHLF@0.030638,SKNSHRA@0, 0 0 0 0 ENSG00000225974.1 ENST00000438923.1 chr7:15728700-15730479 2 310 1467 intergenic 0 0 0,0,0 0 0,0,0 32.8 0 106.554 39.5161290322581 0.627130197682345 36.316 40.6193548387097 2.05316973415133 35.467 0 0 chimp,cow,elephant,guinea_pig,horse,human,macaque,marmoset,mouse,orangutan, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000229379.1 ENST00000425322.1 chr7:15880922-15881985 2 326 735 intergenic -13.61 0 0,1,1 0 0,0,0 0 0 0 0 0 0 0 0 0 0 0 chimp,elephant,guinea_pig,human,macaque,marmoset,orangutan,panda, lincRNA lincRNA A549@0.0205645,AG04450@0.0361025,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0.0319665,K562@0.021237,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0.0333565, 0 0 0 0 ENSG00000229688.2 ENST00000438573.1 chr7:16250113-16310229 5 2247 57861 intronic 3.78 0 0,1,1 0 0,0,0 0 3.14576312196471 0 15.5291499777481 5.75715939924993 0 18.5665331553182 7.07545669794853 0 0 0 chimp,dog,elephant,guinea_pig,horse,human,macaque,marmoset,mouse,orangutan,panda,rabbit, lincRNA processed_transcript A549@0,AG04450@0,BJ@0,GM12878@0.0023585,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@2.58905,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0.001009, 0 0 0 0 ENSG00000229688.2 ENST00000457112.1 chr7:16250169-16308872 5 653 58042 intronic -6.17 0 0,1,1 0 0,0,0 0 3.1359532752145 0 55.9984686064319 5.71038213707316 0 57.6508422664625 7.02408600668481 0 0 0 chimp,elephant,guinea_pig,horse,human,macaque,marmoset,mouse,orangutan,pig,rabbit,rat, lincRNA processed_transcript A549@0,AG04450@0,BJ@0,GM12878@0.0023585,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@2.58905,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0.001009, 0 0 0 0 ENSG00000241044.1 ENST00000436328.1 chr7:16308874-16310229 2 428 925 intronic -0.63 0 0,0,1 0 0,0,0 0 0 0 0 0 34.894 3.51869158878505 4.61405405405405 35.945 0 0 chimp,elephant,guinea_pig,horse,human,macaque,marmoset,orangutan,panda,rabbit, lincRNA processed_transcript A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@1.02264,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000235837.1 ENST00000418907.1 chr7:16735496-16759523 4 644 23377 exonic 4.22 0 1,1,1 0 0,0,0 84.8804347826087 18.7175001069427 0 140.422360248447 18.225691919408 0 112.47049689441 19.9934978825341 5.271 0 0 chimp,cow,dog,elephant,horse,human,macaque,marmoset,orangutan,panda, antisense antisense A549@0.028012,AG04450@0.0069175,BJ@0.007534,GM12878@0,H1HESC@0,HELAS3@0.003487,HEPG2@0,HMEC@0,HSMM@0.003518,HUVEC@0,K562@0.0077145,MCF7@0,NHEK@0.00406567,NHLF@0.003011,SKNSHRA@0, 0 0 0 0 ENSG00000237773.1 ENST00000436175.1 chr7:17319458-17320927 2 529 938 intergenic -0.34 1 0,0,0 0 0,0,0 0 0 0 0 0 4.208 0 0 7.997 0 0 chimp,human,macaque,marmoset,orangutan, antisense antisense A549@0.166584,AG04450@0.0785425,BJ@0.10482,GM12878@0.039098,H1HESC@0.022171,HELAS3@0.171285,HEPG2@0.105166,HMEC@0.116023,HSMM@0.142668,HUVEC@0.149952,K562@0,MCF7@0.087962,NHEK@0.138914,NHLF@0.143961,SKNSHRA@0, 0 0 0 0 ENSG00000237773.1 ENST00000419382.1 chr7:17319459-17338070 4 716 17889 intergenic -0.95 1 0,1,0 0 0,0,0 3.08379888268156 15.8157526971882 127.567 1.83659217877095 17.5522947062441 83.804 1.85055865921788 18.4492705014255 88.305 0 0 cat,chimp,cow,dog,elephant,guinea_pig,horse,human,macaque,orangutan,panda, antisense antisense A549@0.166584,AG04450@0.0785425,BJ@0.10482,GM12878@0.039098,H1HESC@0.022171,HELAS3@0.171285,HEPG2@0.105166,HMEC@0.116023,HSMM@0.142668,HUVEC@0.149952,K562@0,MCF7@0.087962,NHEK@0.138914,NHLF@0.143961,SKNSHRA@0, 0 0 0 0 ENSG00000237773.1 ENST00000443664.1 chr7:17319568-17320930 2 425 935 intergenic -0.20 1 0,0,0 0 0,0,0 0 0 0 0 0 4.208 0 0 7.997 0 0 chimp,human,macaque,marmoset,orangutan, antisense antisense A549@0.166584,AG04450@0.0785425,BJ@0.10482,GM12878@0.039098,H1HESC@0.022171,HELAS3@0.171285,HEPG2@0.105166,HMEC@0.116023,HSMM@0.142668,HUVEC@0.149952,K562@0,MCF7@0.087962,NHEK@0.138914,NHLF@0.143961,SKNSHRA@0, 0 0 0 0 ENSG00000237773.1 ENST00000433005.1 chr7:17325899-17338981 2 538 12542 exonic 13.52 1 1,1,1 1 0,0,0 52.1263940520446 29.2573752192633 18.081 86.0631970260223 27.3411736565141 2.63 85.9646840148699 28.64997608037 2.72 0 0 cow,human,marmoset,orangutan,panda, antisense antisense A549@0.166584,AG04450@0.0785425,BJ@0.10482,GM12878@0.039098,H1HESC@0.022171,HELAS3@0.171285,HEPG2@0.105166,HMEC@0.116023,HSMM@0.142668,HUVEC@0.149952,K562@0,MCF7@0.087962,NHEK@0.138914,NHLF@0.143961,SKNSHRA@0, 0 0 0 0 ENSG00000237773.1 ENST00000424101.1 chr7:17325901-17334846 3 364 8577 intergenic 0 1 0,0,1 0 0,0,0 0 32.986825230267 0 0 35.4241576308733 0 0 36.8056429987175 0 0 0 chimp,cow,dog,elephant,guinea_pig,horse,human,macaque,marmoset,orangutan, antisense antisense A549@0.166584,AG04450@0.0785425,BJ@0.10482,GM12878@0.039098,H1HESC@0.022171,HELAS3@0.171285,HEPG2@0.105166,HMEC@0.116023,HSMM@0.142668,HUVEC@0.149952,K562@0,MCF7@0.087962,NHEK@0.138914,NHLF@0.143961,SKNSHRA@0, 0 0 0 0 ENSG00000237773.1 ENST00000448664.1 chr7:17325901-17334885 4 537 8441 intergenic -13.54 1 0,0,1 0 0,0,0 0 33.5183035185405 0 0 35.9949058168463 0 0 37.3986494491174 0 0 0 chimp,cow,human,macaque,marmoset,orangutan, antisense antisense A549@0.166584,AG04450@0.0785425,BJ@0.10482,GM12878@0.039098,H1HESC@0.022171,HELAS3@0.171285,HEPG2@0.105166,HMEC@0.116023,HSMM@0.142668,HUVEC@0.149952,K562@0,MCF7@0.087962,NHEK@0.138914,NHLF@0.143961,SKNSHRA@0, 0 0 0 0 ENSG00000237773.1 ENST00000452249.1 chr7:17325903-17338070 3 438 11725 intergenic -5.68 1 1,1,1 0 0,0,0 5.04109589041096 24.1303198294243 127.567 3.00228310502283 25.9132622601279 83.804 3.02511415525114 26.9238379530917 88.305 0 0 cat,chimp,cow,dog,horse,human,macaque,marmoset,orangutan,panda, antisense antisense A549@0.166584,AG04450@0.0785425,BJ@0.10482,GM12878@0.039098,H1HESC@0.022171,HELAS3@0.171285,HEPG2@0.105166,HMEC@0.116023,HSMM@0.142668,HUVEC@0.149952,K562@0,MCF7@0.087962,NHEK@0.138914,NHLF@0.143961,SKNSHRA@0, 0 0 0 0 ENSG00000237773.1 ENST00000415246.1 chr7:17325903-17338083 4 592 11582 intergenic -5.68 1 1,1,1 0 0,0,0 11.8108108108108 24.4282507338974 122.783 3.55405405405405 26.2332067000518 83.278 3.58108108108108 27.2562597133483 87.775 0 0 chimp,human,macaque,marmoset,orangutan, antisense antisense A549@0.166584,AG04450@0.0785425,BJ@0.10482,GM12878@0.039098,H1HESC@0.022171,HELAS3@0.171285,HEPG2@0.105166,HMEC@0.116023,HSMM@0.142668,HUVEC@0.149952,K562@0,MCF7@0.087962,NHEK@0.138914,NHLF@0.143961,SKNSHRA@0, 0 0 0 0 ENSG00000236318.1 ENST00000419463.1 chr7:17414491-17506288 4 833 90958 intergenic 3.47 0 0,1,1 0 0,0,0 133.516206482593 6.92745003188285 0 167.720288115246 8.87883418720728 0 165.881152460984 9.04504276699136 0 0 0 chimp,dog,elephant,horse,human,macaque,marmoset,mouse,opossum,orangutan,panda,rabbit, lincRNA lincRNA A549@0.033931,AG04450@0.003537,BJ@0.0077325,GM12878@0.613956,H1HESC@0,HELAS3@0.0300665,HEPG2@0,HMEC@0,HSMM@0.01528,HUVEC@0.0035555,K562@0,MCF7@0.0218905,NHEK@0.00427967,NHLF@0.0807885,SKNSHRA@0.0054215, 0 0 0 0 ENSG00000236039.1 ENST00000439046.1 chr7:17474101-17500296 5 584 25603 intergenic 2.87 0 0,0,0 0 0,0,0 0 8.34761551380697 0 2.36301369863014 13.2064601804476 0 2.72260273972603 13.0231613482795 0 0 0 chimp,guinea_pig,human,macaque,marmoset,orangutan, lincRNA lincRNA A549@0.063288,AG04450@0,BJ@0.0063455,GM12878@0.007959,H1HESC@0.004941,HELAS3@0,HEPG2@0.0056075,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0.0158975,NHEK@0.162193,NHLF@0.014919,SKNSHRA@0, 0 0 0 0 ENSG00000236039.1 ENST00000454003.1 chr7:17475654-17497060 3 385 21017 intergenic -5.62 0 0,0,1 0 0,0,0 0 8.32754436884427 0 0 12.896940571918 0 0 12.9317219393824 0 0 0 chimp,human,macaque,orangutan, lincRNA lincRNA A549@0.063288,AG04450@0,BJ@0.0063455,GM12878@0.007959,H1HESC@0.004941,HELAS3@0,HEPG2@0.0056075,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0.0158975,NHEK@0.162193,NHLF@0.014919,SKNSHRA@0, 0 0 0 0 ENSG00000226598.1 ENST00000451792.1 chr7:17503069-17598533 4 438 95020 intergenic 4.10 0 0,0,0 0 0,0,0 0 12.4194590612503 65.583 0 13.0776362870974 66.546 0 15.002999368554 72.995 0 0 cat,chimp,cow,elephant,horse,human,macaque,marmoset,orangutan,panda,pig, lincRNA lincRNA A549@0.094531,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0.0098125,HUVEC@0,K562@0,MCF7@0.120636,NHEK@0.074933,NHLF@0.01756,SKNSHRA@0, 0 0 0 0 ENSG00000228675.1 ENST00000448898.1 chr7:17719173-17720283 2 271 837 intergenic 0 0 0,0,0 0 0,0,0 0 18.1362007168459 0 0 0 0 21.3025830258303 0 4.769 0 0 chimp,cow,human,macaque,marmoset,orangutan, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0.007537,HUVEC@0,K562@0,MCF7@0,NHEK@0.034688,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000225000.1 ENST00000411797.1 chr7:18468685-18470361 2 544 1130 intronic -4.31 0 0,0,0 0 0,0,0 0 40.0982300884956 0 0 8.67256637168142 0 0 10.9469026548673 0 0 0 chimp,human,macaque,marmoset,orangutan, antisense antisense A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000226522.1 ENST00000447057.1 chr7:18931719-18939056 3 310 7023 intronic 5.50 0 0,1,0 0 0,0,0 0 15.105510465613 59.455 0 31.2058949167023 59.683 0 29.1957852769472 55.718 0 0 chimp,cow,horse,human,macaque,marmoset,orangutan,panda,pig, antisense antisense A549@0,AG04450@0,BJ@0.041356,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000232821.1 ENST00000419944.1 chr7:19152097-19153894 2 1709 86 intergenic 5.74 0 0,0,0 0 0,0,0 84.2071386775892 585 141.947 129.498537156232 741 182.324 120.502047981276 745 182.112 0 0 chimp,cow,dog,elephant,horse,human,macaque,marmoset,orangutan,panda,pig, antisense antisense A549@0,AG04450@0,BJ@0.0057065,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0.0012025,HUVEC@0,K562@0.002871,MCF7@0.0024035,NHEK@0,NHLF@0,SKNSHRA@0.1016, 0 0 0 0 ENSG00000236536.1 ENST00000417460.1 chr7:19159556-19161539 2 690 1291 intergenic 3.94 1 0,0,1 0 0,0,0 0 0 55.005 13.0521739130435 24.9728892331526 47.116 8.79710144927536 30.0945003872967 39.912 0 0 cat,chimp,dog,elephant,guinea_pig,horse,human,macaque,marmoset,orangutan,panda,pig, antisense antisense A549@0.007983,AG04450@0.284433,BJ@0.382541,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0.144161,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0.0112475,SKNSHRA@2.24552, 0 0 0 0 ENSG00000229533.1 ENST00000452700.1 chr7:19183916-19185876 2 1524 434 exonic 7.78 1 0,0,0 0 0,0,0 300.984908136483 14.184331797235 6.16 213.956036745407 5.2741935483871 0 194.372047244094 7.47004608294931 0 0 0 chimp,cow,dog,elephant,horse,human,macaque,marmoset,mouse,orangutan,panda,pig,rat, lincRNA processed_transcript A549@0,AG04450@0.0068175,BJ@0.0079155,GM12878@0,H1HESC@0.010381,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0.0053935,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0.0883345, 0 0 0 0 ENSG00000223838.1 ENST00000412563.1 chr7:19393157-19618229 6 560 224502 intergenic 3.81 0 0,1,0 0 0,0,0 0 25.8371996685998 33.384 4.26785714285714 32.4883653597741 139.302 4.625 32.9370206056071 137.272 0 0 chimp,cow,horse,human,macaque,marmoset,orangutan,rabbit, lincRNA lincRNA A549@0,AG04450@0.025011,BJ@0,GM12878@0.0035615,H1HESC@0.0295285,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0.0153255,HUVEC@0,K562@0.018921,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000237921.2 ENST00000418764.2 chr7:19853308-19857713 4 365 4034 intergenic 3.64 0 0,0,0 0 0,0,0 0 0 0 0 1.83663857213684 0 36.9698630136986 15.6157659890927 0 0 0 chimp,horse,human,macaque,marmoset,orangutan, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0.150404,H1HESC@0.13128,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000243004.1 ENST00000457921.1 chr7:19958604-20007860 4 562 48688 intergenic -4.89 1 0,0,1 0 0,0,0 0 1.14942080184029 0 39.4377224199288 4.41371590535656 0 44.8825622775801 4.82178360170884 0 0 0 cat,chimp,cow,dog,elephant,guinea_pig,horse,human,macaque,marmoset,mouse,orangutan,panda,pig,rabbit, processed_transcript processed_transcript A549@0.0294565,AG04450@0.0193605,BJ@0.015292,GM12878@1.87996,H1HESC@2.63317,HELAS3@0.028439,HEPG2@0.0245855,HMEC@0.01692,HSMM@0,HUVEC@0,K562@0.22865,MCF7@0.334691,NHEK@0.369163,NHLF@0.037123,SKNSHRA@0.013257, 0 0 0 0 ENSG00000243004.1 ENST00000449573.1 chr7:19958615-20042545 4 800 83124 intergenic -0.78 1 0,0,1 0 0,0,0 134.0775 1.00098647803282 160.893 156.3475 3.55102016264857 198.674 192.19875 3.92455849092921 248.184 0 0 cat,chimp,cow,dog,elephant,guinea_pig,horse,human,macaque,marmoset,mouse,opossum,orangutan,panda,pig,rabbit,rat, processed_transcript processed_transcript A549@0.0294565,AG04450@0.0193605,BJ@0.015292,GM12878@1.87996,H1HESC@2.63317,HELAS3@0.028439,HEPG2@0.0245855,HMEC@0.01692,HSMM@0,HUVEC@0,K562@0.22865,MCF7@0.334691,NHEK@0.369163,NHLF@0.037123,SKNSHRA@0.013257, 0 0 0 0 ENSG00000243004.1 ENST00000415499.1 chr7:19970694-20164785 6 737 193344 intergenic 1.44 0 0,1,0 0 0,0,0 0 4.14218181065872 0 0 6.7720953326713 0 0 7.92482311320755 0 0 0 chimp,human,macaque,marmoset,orangutan, processed_transcript processed_transcript A549@0.0294565,AG04450@0.0193605,BJ@0.015292,GM12878@1.87996,H1HESC@2.63317,HELAS3@0.028439,HEPG2@0.0245855,HMEC@0.01692,HSMM@0,HUVEC@0,K562@0.22865,MCF7@0.334691,NHEK@0.369163,NHLF@0.037123,SKNSHRA@0.013257, 0 0 0 0 ENSG00000243004.1 ENST00000424516.1 chr7:19982842-20042467 4 706 58913 intergenic 3.57 0 0,0,0 0 0,0,0 93.2634560906516 0.462427647548079 202.311 105.746458923513 2.2400149372804 246.8 128.028328611898 2.62332592127374 307.932 0 0 cat,chimp,cow,dog,elephant,guinea_pig,horse,human,macaque,marmoset,mouse,opossum,orangutan,panda,pig,rabbit,rat, processed_transcript processed_transcript A549@0.0294565,AG04450@0.0193605,BJ@0.015292,GM12878@1.87996,H1HESC@2.63317,HELAS3@0.028439,HEPG2@0.0245855,HMEC@0.01692,HSMM@0,HUVEC@0,K562@0.22865,MCF7@0.334691,NHEK@0.369163,NHLF@0.037123,SKNSHRA@0.013257, 0 0 0 0 ENSG00000243004.1 ENST00000418442.1 chr7:20046728-20171342 6 581 124023 intergenic 3.23 1 0,0,0 0 0,0,0 0 3.61580513291889 0 3.84165232358003 7.76381800149973 3.09 0 8.55775138482378 3.04 0 0 chimp,elephant,horse,human,macaque,marmoset,orangutan,panda,pig, processed_transcript processed_transcript A549@0.0294565,AG04450@0.0193605,BJ@0.015292,GM12878@1.87996,H1HESC@2.63317,HELAS3@0.028439,HEPG2@0.0245855,HMEC@0.01692,HSMM@0,HUVEC@0,K562@0.22865,MCF7@0.334691,NHEK@0.369163,NHLF@0.037123,SKNSHRA@0.013257, 0 0 0 0 ENSG00000228598.1 ENST00000439285.1 chr7:20181539-20193154 4 635 10974 intronic -5.73 0 0,0,1 0 0,0,0 0.481889763779528 2.99799526152725 131.463 11.6850393700787 10.0296154547111 143.555 6.42047244094488 10.9686531802442 166.756 0 0 cat,chimp,cow,dog,elephant,guinea_pig,horse,human,macaque,marmoset,mouse,orangutan,panda,rabbit,rat, antisense antisense A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0.43255,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0.0093145,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000233834.2 ENST00000439058.1 chr7:20257200-20261304 4 663 3435 intergenic 1.65 0 1,1,1 0 0,0,0 0 11.2710334788937 0 3.92307692307692 26.5598253275109 31.15 3.92307692307692 22.7854439592431 38.382 0 0 cat,chimp,cow,dog,elephant,guinea_pig,horse,human,macaque,marmoset,orangutan,panda,rabbit, lincRNA lincRNA A549@0.0144525,AG04450@0.0521545,BJ@0,GM12878@10.8782,H1HESC@1.45468,HELAS3@0.113472,HEPG2@0.009583,HMEC@0.006139,HSMM@0.003372,HUVEC@0,K562@0.719863,MCF7@0.217511,NHEK@0.38464,NHLF@0.0145615,SKNSHRA@0, 0 0 0 0 ENSG00000233834.2 ENST00000430859.1 chr7:20257209-20261315 5 735 3363 intergenic 1.65 0 1,1,1 0 0,0,0 0 11.5123401724651 0 11.0068027210884 25.3913172762415 31.15 9.13197278911565 21.9390425215581 38.382 0 0 cat,chimp,cow,dog,elephant,horse,human,macaque,marmoset,orangutan,panda,rabbit, lincRNA lincRNA A549@0.0144525,AG04450@0.0521545,BJ@0,GM12878@10.8782,H1HESC@1.45468,HELAS3@0.113472,HEPG2@0.009583,HMEC@0.006139,HSMM@0.003372,HUVEC@0,K562@0.719863,MCF7@0.217511,NHEK@0.38464,NHLF@0.0145615,SKNSHRA@0, 0 0 0 0 ENSG00000233834.2 ENST00000439446.1 chr7:20259062-20261323 2 674 1585 intergenic 1.65 0 0,0,1 0 0,0,0 0 12.6750788643533 0 3.85905044510386 49.1255520504732 0 3.85905044510386 40.3394321766562 0 0 0 chimp,elephant,human,macaque,marmoset,mouse,orangutan,rat, lincRNA retained_intron A549@0.0144525,AG04450@0.0521545,BJ@0,GM12878@10.8782,H1HESC@1.45468,HELAS3@0.113472,HEPG2@0.009583,HMEC@0.006139,HSMM@0.003372,HUVEC@0,K562@0.719863,MCF7@0.217511,NHEK@0.38464,NHLF@0.0145615,SKNSHRA@0, 0 0 0 0 ENSG00000226097.1 ENST00000446399.1 chr7:20336331-20351335 5 1119 13877 intergenic 0 1 0,0,0 0 0,0,0 65.5344057193923 5.14578078835483 0 79.9839142091153 9.57058442026375 0 65.2377122430742 10.3087122576926 0 0 0 cat,chimp,cow,dog,elephant,guinea_pig,horse,human,macaque,marmoset,orangutan,panda,pig,platypus, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0.174223,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0.00132933,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000226097.1 ENST00000453564.1 chr7:20337917-20340248 3 373 1954 intergenic 0 0 0,0,1 0 0,0,0 0 30.5588536335722 0 28.9571045576408 23.0885363357216 0 29.798927613941 28.1914022517912 0 0 0 chimp,human,macaque,marmoset,orangutan, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0.174223,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0.00132933,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000226097.1 ENST00000455373.1 chr7:20345334-20351335 2 989 5010 intergenic 0 1 0,0,0 0 0,0,0 74.1486349848332 2.33453093812375 0 89.0475227502528 10.272255489022 0 72.3387259858443 9.66327345309381 0 0 0 chimp,cow,dog,elephant,guinea_pig,horse,human,macaque,marmoset,orangutan,panda,platypus,rabbit, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0.174223,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0.00132933,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000232790.1 ENST00000447262.1 chr7:20875050-21061771 5 427 186286 intergenic -0.44 0 0,1,1 1 0,0,0 0 39.3071943141191 0 0 45.324892906606 0 0 49.3966052199307 0 0 0 cat,chimp,cow,dog,elephant,guinea_pig,horse,human,macaque,marmoset,orangutan,panda,pig,rabbit, processed_transcript processed_transcript A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0.0839655,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0.072316,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000232759.1 ENST00000435127.1 chr7:22602956-22613615 4 2428 8225 intronic 2.20 0 1,1,1 0 0,0,0 0 2.06200607902736 0 6.8340197693575 2.14699088145897 0 7.10749588138386 2.94966565349544 0 0 0 chimp,dog,human,macaque,marmoset,orangutan,panda,pig, lincRNA processed_transcript A549@0.0159315,AG04450@0.374455,BJ@0.186729,GM12878@0,H1HESC@0.0596315,HELAS3@0.108889,HEPG2@0.016824,HMEC@0.005051,HSMM@0.009489,HUVEC@2.18393,K562@1.61189,MCF7@0.0597165,NHEK@0.0451373,NHLF@0.127779,SKNSHRA@0.01061, 0 0 0 0 ENSG00000225541.1 ENST00000442252.1 chr7:22611226-22701411 2 1280 88903 intronic 1.45 1 0,0,1 0 0,0,0 0 5.72031315028739 45.592 0 6.60026095857283 36.095 0 7.43721809162795 35.581 0 0 cat,chimp,dog,horse,human,macaque,orangutan,pig, processed_transcript processed_transcript A549@0.016513,AG04450@0.082467,BJ@0.0977505,GM12878@0,H1HESC@0.074746,HELAS3@0.0700825,HEPG2@0.0165885,HMEC@0,HSMM@0.0139085,HUVEC@0.581894,K562@2.7859,MCF7@0.0061755,NHEK@0.023601,NHLF@0.0378445,SKNSHRA@0.0020115, 0 0 0 0 ENSG00000232949.1 ENST00000439823.1 chr7:22629324-22631241 2 555 1360 intronic -2.66 0 0,1,0 0 0,0,0 0 19.8 0 16.8396396396396 31.4683823529412 3.72 17.8774774774775 31.4073529411765 3.975 0 0 chimp,cow,dog,elephant,horse,human,marmoset,orangutan,panda, lincRNA lincRNA A549@0.009918,AG04450@0.168409,BJ@0.074589,GM12878@0,H1HESC@0.294083,HELAS3@0.0221175,HEPG2@0,HMEC@0,HSMM@0.0229615,HUVEC@2.28187,K562@0.789477,MCF7@0,NHEK@0,NHLF@0.0832945,SKNSHRA@0, 0 0 0 0 ENSG00000238033.1 ENST00000414116.1 chr7:22689579-22705152 5 2587 12978 intergenic 0.47 1 1,1,1 0 0,0,0 10.5492848859683 4.64570812143628 0 47.0943177425589 5.54199414393589 0.526 40.988790104368 6.05262752350131 0.53 0 0 chimp,horse,human,macaque,marmoset,orangutan, lincRNA lincRNA A549@0.0023285,AG04450@0.007997,BJ@0.0194615,GM12878@0,H1HESC@0.0079065,HELAS3@0.0081745,HEPG2@0.0017805,HMEC@0,HSMM@0,HUVEC@0.066965,K562@0.591436,MCF7@0,NHEK@0,NHLF@0.0111905,SKNSHRA@0, 0 0 0 0 ENSG00000179428.2 ENST00000325042.2 chr7:22765014-22767239 2 1362 861 exonic 1.28 1 1,1,1 1 0,0,0 8.42290748898678 81.0336817653891 0 13.1226138032305 224.331010452962 5.58 16.5785609397944 179.825783972125 8.478 0 0 cat,chimp,horse,human,macaque,marmoset,orangutan,panda, antisense antisense A549@0.0098905,AG04450@0.66824,BJ@0.56816,GM12878@0,H1HESC@0.140639,HELAS3@0.899173,HEPG2@0.290469,HMEC@0,HSMM@0.235649,HUVEC@2.79368,K562@0.203622,MCF7@0.003015,NHEK@0.00193567,NHLF@1.29091,SKNSHRA@0.0537695, 0 0 0 0 ENSG00000228649.1 ENST00000432668.1 chr7:22895705-22896694 2 572 415 intergenic -12.18 0 0,0,0 0 0,0,0 0 88.178313253012 0 2.94755244755245 89.4939759036145 0 3.13636363636364 91.9277108433735 0 0 0 cat,chimp,elephant,horse,human,macaque,marmoset,orangutan, lincRNA retained_intron A549@4.24139,AG04450@2.36048,BJ@2.03395,GM12878@3.06455,H1HESC@3.13635,HELAS3@1.51514,HEPG2@1.94423,HMEC@1.08394,HSMM@0.365845,HUVEC@1.94989,K562@3.21023,MCF7@0.37966,NHEK@3.05579,NHLF@1.3262,SKNSHRA@0.099498, 0 0 0 0 ENSG00000228649.1 ENST00000415611.1 chr7:22896140-22899106 3 994 1968 intergenic 1.78 0 0,0,0 0 0,0,0 0 18.594512195122 0 1.69617706237425 18.8719512195122 0 1.80482897384306 19.385162601626 0 0 0 cat,chimp,dog,horse,human,macaque,marmoset,orangutan, lincRNA lincRNA A549@4.24139,AG04450@2.36048,BJ@2.03395,GM12878@3.06455,H1HESC@3.13635,HELAS3@1.51514,HEPG2@1.94423,HMEC@1.08394,HSMM@0.365845,HUVEC@1.94989,K562@3.21023,MCF7@0.37966,NHEK@3.05579,NHLF@1.3262,SKNSHRA@0.099498, 0 0 0 0 ENSG00000228649.1 ENST00000422542.1 chr7:22896147-22900458 3 363 3944 intergenic 0 0 0,0,0 0 0,0,0 0 9.27839756592292 0 4.64462809917355 9.90162271805274 0 4.94214876033058 10.1820486815416 0 0 0 cat,chimp,dog,elephant,horse,human,macaque,marmoset,orangutan,rabbit, lincRNA lincRNA A549@4.24139,AG04450@2.36048,BJ@2.03395,GM12878@3.06455,H1HESC@3.13635,HELAS3@1.51514,HEPG2@1.94423,HMEC@1.08394,HSMM@0.365845,HUVEC@1.94989,K562@3.21023,MCF7@0.37966,NHEK@3.05579,NHLF@1.3262,SKNSHRA@0.099498, 0 0 0 0 ENSG00000235664.1 ENST00000421730.1 chr7:22928990-22980809 4 671 51142 intergenic -1.67 0 0,0,1 0 0,0,0 0 3.95459700441907 129.072 14.1967213114754 3.04718235501154 142.668 36.9433681073025 4.45195729537367 148.756 0 0 chimp,human,macaque,marmoset,orangutan, lincRNA lincRNA A549@0.01552,AG04450@0.146632,BJ@0.337121,GM12878@0.181268,H1HESC@0.007385,HELAS3@0.0467495,HEPG2@0.0815415,HMEC@0,HSMM@0.047697,HUVEC@0.192046,K562@0.248298,MCF7@0.08186,NHEK@0.19665,NHLF@0.020138,SKNSHRA@0, 0 0 0 0 ENSG00000230658.1 ENST00000419813.1 chr7:23140847-23145322 3 2561 1910 intergenic 3.42 0 0,1,1 1 0,0,0 0 0 74.299 0 0 93.296 0.310425614994143 0 99.442 0 0 chimp,human,marmoset,orangutan, lincRNA processed_transcript A549@0.433613,AG04450@0.0294315,BJ@0.245784,GM12878@0.281428,H1HESC@0.44687,HELAS3@0.365921,HEPG2@0.28469,HMEC@0.497757,HSMM@0.320142,HUVEC@0.221103,K562@1.14365,MCF7@0.163812,NHEK@0.215821,NHLF@0.172814,SKNSHRA@0.384144, 0 0 0 0 ENSG00000226816.1 ENST00000413042.1 chr7:23245632-23247664 2 1997 33 intergenic 5.94 0 0,1,1 0 0,0,0 0 0 0 25.5588382573861 0 0 51.9293940911367 0 0 0 0 cat,chimp,cow,dog,elephant,guinea_pig,horse,human,macaque,marmoset,mouse,orangutan,panda,pig,rabbit,rat, lincRNA lincRNA A549@0.0462905,AG04450@0,BJ@0.0161885,GM12878@0.0292475,H1HESC@0.0333515,HELAS3@0.035998,HEPG2@0.0312335,HMEC@0,HSMM@0.0020585,HUVEC@0.140867,K562@0.01349,MCF7@0.010211,NHEK@0.0150237,NHLF@0,SKNSHRA@0.019852, 0 0 0 0 ENSG00000234286.1 ENST00000454029.1 chr7:23719814-23720405 2 141 448 exonic 0 0 0,1,1 1 0,0,0 0 0 0 142.404255319149 18.4821428571429 4.59 139 19.96875 4.828 0 0 chimp,human,macaque,marmoset,orangutan, antisense antisense A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000227930.1 ENST00000412828.1 chr7:23931323-23936954 2 497 5132 intergenic -1.60 0 0,0,0 0 0,0,0 0 6.92614964925955 0 14.7887323943662 2.80378020265004 0 15.2917505030181 7.13795791114575 0 0 0 cat,chimp,cow,dog,elephant,guinea_pig,horse,human,macaque,orangutan,panda,pig, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0.004528,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000228944.1 ENST00000439839.1 chr7:24236281-24295338 2 525 58530 intergenic -3.33 0 0,0,0 0 0,0,0 0 16.6855800444217 6.82 0 16.4943447804545 3.51 0 17.1136511190842 3.614 0 0 cat,chimp,dog,horse,human,macaque,marmoset,orangutan, antisense antisense A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0.534189,HELAS3@0.0128625,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0.0203215,MCF7@0.007803,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000233824.1 ENST00000414127.1 chr7:25360921-25366434 3 359 5150 intergenic 0 0 0,0,1 0 0,0,0 94.1532033426184 60.1060194174757 17.316 139.612813370474 43.5627184466019 12.295 174.779944289694 48.5926213592233 20.129 0 0 chimp,dog,elephant,guinea_pig,horse,human,macaque,marmoset,orangutan,panda,pig, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000227386.1 ENST00000412197.1 chr7:25587382-25590682 2 207 3091 intergenic -4.73 0 0,1,0 0 0,0,0 0 56.6612746683921 0 0 86.6198641216435 0 0 85.1646716273051 0 0 0 chimp,human,macaque,marmoset,orangutan, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000223561.2 ENST00000446840.1 chr7:25632971-25702673 4 1866 67830 intergenic -0.59 0 0,1,0 0 0,0,0 78.1479099678457 52.8106295149639 25.862 34.8917470525188 56.1194751584844 71.926 35.2036441586281 57.2171310629515 66.23 0 0 cat,chimp,cow,dog,elephant,horse,human,macaque,marmoset,orangutan,panda, processed_transcript processed_transcript A549@0,AG04450@0.0082825,BJ@0.00686,GM12878@0.043218,H1HESC@0.012002,HELAS3@0,HEPG2@0,HMEC@0.00219,HSMM@0.0011005,HUVEC@0.002323,K562@0.0085465,MCF7@0,NHEK@0.00323767,NHLF@0.013736,SKNSHRA@0.006071, 0 0 0 0 ENSG00000223561.2 ENST00000456777.1 chr7:25634153-25790614 4 585 155870 intergenic -0.30 0 0,1,0 0 0,0,0 0 44.3151408224803 83.5 17.8034188034188 46.8579585552063 67.937 18.7282051282051 49.5970809007506 57.203 0 0 cat,chimp,horse,human,macaque,marmoset,orangutan,pig,rabbit, processed_transcript processed_transcript A549@0,AG04450@0.0082825,BJ@0.00686,GM12878@0.043218,H1HESC@0.012002,HELAS3@0,HEPG2@0,HMEC@0.00219,HSMM@0.0011005,HUVEC@0.002323,K562@0.0085465,MCF7@0,NHEK@0.00323767,NHLF@0.013736,SKNSHRA@0.006071, 0 0 0 0 ENSG00000223561.2 ENST00000423689.2 chr7:25696691-25702561 3 1278 4588 intergenic -2.52 0 0,1,0 0 0,0,0 128.219092331768 142.405841325196 48.608 80.8521126760563 64.8432868352223 55.987 90.3380281690141 65.7218831734961 63.381 0 0 cat,chimp,cow,dog,elephant,guinea_pig,horse,human,macaque,marmoset,mouse,orangutan,panda,pig,rabbit,rat, processed_transcript retained_intron A549@0,AG04450@0.0082825,BJ@0.00686,GM12878@0.043218,H1HESC@0.012002,HELAS3@0,HEPG2@0,HMEC@0.00219,HSMM@0.0011005,HUVEC@0.002323,K562@0.0085465,MCF7@0,NHEK@0.00323767,NHLF@0.013736,SKNSHRA@0.006071, 0 0 0 0 ENSG00000225792.1 ENST00000451368.1 chr7:26411764-26415892 2 609 3517 exonic 3.08 0 0,1,1 1 0,0,0 463.980295566502 97.8077907307364 0 588.945812807882 70.0295706568098 39.301 578.073891625616 60.636622121126 37.603 0 0 chimp,cow,dog,elephant,guinea_pig,horse,human,macaque,marmoset,mouse,opossum,orangutan,panda,pig,platypus,rabbit,rat, antisense antisense A549@0.027403,AG04450@0,BJ@0,GM12878@0,H1HESC@0.056224,HELAS3@0.007878,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0.383159,K562@0,MCF7@0.139991,NHEK@0,NHLF@0,SKNSHRA@0.0079775, 0 0 0 0 ENSG00000225792.1 ENST00000451264.1 chr7:26411952-26416321 2 506 3861 exonic -4.48 0 0,1,1 1 0,0,0 298.03162055336 92.1937321937322 0 336.422924901186 82.4488474488475 10.322 349.513833992095 69.03626003626 8.481 0 0 chimp,elephant,human,macaque,marmoset,panda, antisense antisense A549@0.027403,AG04450@0,BJ@0,GM12878@0,H1HESC@0.056224,HELAS3@0.007878,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0.383159,K562@0,MCF7@0.139991,NHEK@0,NHLF@0,SKNSHRA@0.0079775, 0 0 0 0 ENSG00000214870.4 ENST00000439120.1 chr7:26438213-26533876 2 889 94772 intergenic 12.30 0 0,1,0 1 0,0,0 33.4083239595051 49.4096885155953 0 57.9966254218223 55.482705862491 0 75.7671541057368 56.7200227915418 7.292 0 0 cat,chimp,cow,dog,human,macaque,marmoset,mouse,opossum,orangutan,pig,rabbit, lincRNA processed_transcript A549@0.059529,AG04450@0.005221,BJ@0.0094405,GM12878@0.048376,H1HESC@0.733691,HELAS3@0.0454475,HEPG2@0,HMEC@0.014217,HSMM@0.007284,HUVEC@1.47942,K562@0.1107,MCF7@0.121664,NHEK@0,NHLF@0.016955,SKNSHRA@0.240546, 0 0 0 0 ENSG00000214870.4 ENST00000430548.1 chr7:26438221-26519642 2 574 80845 intergenic 4.44 0 0,1,1 1 0,0,0 99.3780487804878 44.7130682169584 0 118.928571428571 50.2754406580494 0 138.01393728223 51.3671593790587 7.292 0 0 chimp,cow,dog,elephant,guinea_pig,human,macaque,marmoset,opossum,orangutan,pig,rabbit,rat, lincRNA processed_transcript A549@0.059529,AG04450@0.005221,BJ@0.0094405,GM12878@0.048376,H1HESC@0.733691,HELAS3@0.0454475,HEPG2@0,HMEC@0.014217,HSMM@0.007284,HUVEC@1.47942,K562@0.1107,MCF7@0.121664,NHEK@0,NHLF@0.016955,SKNSHRA@0.240546, 0 0 0 0 ENSG00000214870.4 ENST00000421862.1 chr7:26438221-26533764 3 904 94635 intergenic 16.25 0 0,1,1 1 0,0,0 91.9911504424779 48.9079410366144 0 126.884955752212 293.615237491414 0 122.491150442478 56.2863422623765 7.292 0 0 cat,chimp,cow,elephant,human,marmoset,orangutan,rabbit,rat, lincRNA processed_transcript A549@0.059529,AG04450@0.005221,BJ@0.0094405,GM12878@0.048376,H1HESC@0.733691,HELAS3@0.0454475,HEPG2@0,HMEC@0.014217,HSMM@0.007284,HUVEC@1.47942,K562@0.1107,MCF7@0.121664,NHEK@0,NHLF@0.016955,SKNSHRA@0.240546, 0 0 0 0 ENSG00000214870.4 ENST00000449537.1 chr7:26438233-26439183 2 725 223 intergenic 7.24 0 0,1,1 1 0,0,0 40.9655172413793 0 0 62.6937931034483 0 0 76.9020689655172 0 9.357 0 0 chimp,human,macaque,marmoset,opossum,orangutan,pig, lincRNA processed_transcript A549@0.059529,AG04450@0.005221,BJ@0.0094405,GM12878@0.048376,H1HESC@0.733691,HELAS3@0.0454475,HEPG2@0,HMEC@0.014217,HSMM@0.007284,HUVEC@1.47942,K562@0.1107,MCF7@0.121664,NHEK@0,NHLF@0.016955,SKNSHRA@0.240546, 0 0 0 0 ENSG00000214870.4 ENST00000420774.1 chr7:26438272-26439274 2 494 506 intergenic -2.74 0 1,1,1 1 0,0,0 21.8623481781377 36.7588932806324 0 35.4959514170041 54.1837944664032 0 48.9412955465587 58.7272727272727 10.951 0 0 chimp,cow,dog,elephant,human,macaque,marmoset,orangutan,pig, lincRNA processed_transcript A549@0.059529,AG04450@0.005221,BJ@0.0094405,GM12878@0.048376,H1HESC@0.733691,HELAS3@0.0454475,HEPG2@0,HMEC@0.014217,HSMM@0.007284,HUVEC@1.47942,K562@0.1107,MCF7@0.121664,NHEK@0,NHLF@0.016955,SKNSHRA@0.240546, 0 0 0 0 ENSG00000214870.4 ENST00000418758.2 chr7:26438351-26538594 7 3195 97036 intergenic 12.30 0 0,1,0 1 0,0,0 10.1721439749609 49.3260954697226 8.4 12.3677621283255 55.0675625541036 13.527 15.0860719874804 56.3437487118182 30.632 0 0 chimp,elephant,human,macaque,marmoset,orangutan, lincRNA retained_intron A549@0.059529,AG04450@0.005221,BJ@0.0094405,GM12878@0.048376,H1HESC@0.733691,HELAS3@0.0454475,HEPG2@0,HMEC@0.014217,HSMM@0.007284,HUVEC@1.47942,K562@0.1107,MCF7@0.121664,NHEK@0,NHLF@0.016955,SKNSHRA@0.240546, 0 0 0 0 ENSG00000214870.4 ENST00000448056.1 chr7:26479879-26533734 2 565 53288 intergenic 16.25 0 0,0,0 0 0,0,0 135.971681415929 50.5647425311515 463.05 181.113274336283 483.375825701846 510.89 123.334513274336 59.1378922083772 516.954 0 0 chimp,cow,elephant,guinea_pig,horse,human,mouse,pig,rabbit,rat, lincRNA retained_intron A549@0.059529,AG04450@0.005221,BJ@0.0094405,GM12878@0.048376,H1HESC@0.733691,HELAS3@0.0454475,HEPG2@0,HMEC@0.014217,HSMM@0.007284,HUVEC@1.47942,K562@0.1107,MCF7@0.121664,NHEK@0,NHLF@0.016955,SKNSHRA@0.240546, 0 0 0 0 ENSG00000233760.1 ENST00000420912.1 chr7:26591441-26596819 2 2779 2597 intergenic 2.31 0 0,0,1 0 0,0,0 79.4177761784815 0 71.888 101.484706729039 2.38775510204082 76.39 93.7333573227779 2.45706584520601 93.1 0 0 chimp,cow,elephant,horse,human,marmoset,orangutan, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0.0302615,HEPG2@0.0019615,HMEC@0.002945,HSMM@0,HUVEC@0,K562@0.008062,MCF7@0.0277385,NHEK@0.00231633,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000233760.1 ENST00000457000.1 chr7:26591458-26594733 3 573 2698 intergenic 7.20 0 0,0,0 0 0,0,0 0 0 71.888 2.22513089005236 2.29836916234248 76.39 2.26003490401396 2.3650852483321 93.1 0 0 chimp,cow,horse,human,macaque,marmoset,orangutan, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0.0302615,HEPG2@0.0019615,HMEC@0.002945,HSMM@0,HUVEC@0,K562@0.008062,MCF7@0.0277385,NHEK@0.00231633,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000233760.1 ENST00000430426.1 chr7:26591515-26594895 2 568 2810 intergenic -2.20 0 0,0,0 0 0,0,0 18.3380281690141 0 71.888 15.0880281690141 2.2067615658363 75.075 15.4295774647887 2.27081850533808 91.775 0 0 chimp,cow,guinea_pig,horse,human,macaque,marmoset,orangutan,pig,rabbit,rat, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0.0302615,HEPG2@0.0019615,HMEC@0.002945,HSMM@0,HUVEC@0,K562@0.008062,MCF7@0.0277385,NHEK@0.00231633,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000233429.4 ENST00000495032.1 chr7:27135266-27135946 2 161 517 exonic 0 0 0,1,1 0 0,0,0 96.0931677018634 573 324.943 303.937888198758 737.442940038685 428.294 269.223602484472 675.235976789168 370.314 0 0 cat,chimp,cow,dog,elephant,guinea_pig,horse,human,marmoset,panda,pig,rabbit,rat, antisense antisense A549@1.71093,AG04450@2.77163,BJ@1.75492,GM12878@1.41949,H1HESC@0.0073755,HELAS3@2.01356,HEPG2@0.508454,HMEC@2.83496,HSMM@0.830088,HUVEC@4.46324,K562@0.20451,MCF7@0.95889,NHEK@10.164,NHLF@1.07067,SKNSHRA@0.003562, 0 0 0 0 ENSG00000233429.4 ENST00000434063.3 chr7:27135713-27139773 2 669 3389 intergenic -6.19 0 1,1,1 1 0,0,0 261.9177877429 68.0581292416642 483.039 341.553064275037 141.16435526704 666.989 283.415545590434 138.354086751254 586.736 0 0 cat,chimp,cow,dog,elephant,guinea_pig,horse,human,marmoset,mouse,panda,pig,rabbit,rat, antisense antisense A549@1.71093,AG04450@2.77163,BJ@1.75492,GM12878@1.41949,H1HESC@0.0073755,HELAS3@2.01356,HEPG2@0.508454,HMEC@2.83496,HSMM@0.830088,HUVEC@4.46324,K562@0.20451,MCF7@0.95889,NHEK@10.164,NHLF@1.07067,SKNSHRA@0.003562, 0 0 0 0 ENSG00000233429.4 ENST00000429611.3 chr7:27135743-27139585 3 719 3119 intergenic 7.31 1 1,1,1 1 0,0,0 195.82892906815 63.3097146521321 500.229 293.414464534075 134.540237255531 683.163 276.258692628651 132.51330554665 600.232 0 0 cat,chimp,cow,dog,elephant,guinea_pig,horse,human,marmoset,mouse,orangutan,panda,pig,rabbit,rat, antisense antisense A549@1.71093,AG04450@2.77163,BJ@1.75492,GM12878@1.41949,H1HESC@0.0073755,HELAS3@2.01356,HEPG2@0.508454,HMEC@2.83496,HSMM@0.830088,HUVEC@4.46324,K562@0.20451,MCF7@0.95889,NHEK@10.164,NHLF@1.07067,SKNSHRA@0.003562, 0 0 0 0 ENSG00000233429.4 ENST00000425358.2 chr7:27135852-27139585 3 634 3095 intergenic -4.86 1 1,1,1 1 0,0,0 177.059936908517 60.2491114701131 540.339 263.463722397476 130.294991922456 744.057 247.930599369085 127.88788368336 659.532 0 0 cat,chimp,cow,dog,elephant,guinea_pig,horse,human,macaque,marmoset,mouse,orangutan,panda,pig,rabbit,rat, antisense antisense A549@1.71093,AG04450@2.77163,BJ@1.75492,GM12878@1.41949,H1HESC@0.0073755,HELAS3@2.01356,HEPG2@0.508454,HMEC@2.83496,HSMM@0.830088,HUVEC@4.46324,K562@0.20451,MCF7@0.95889,NHEK@10.164,NHLF@1.07067,SKNSHRA@0.003562, 0 0 0 0 ENSG00000233429.4 ENST00000428939.3 chr7:27138458-27139758 2 887 411 intergenic -4.86 0 0,1,1 0 0,0,0 277.573844419391 112.888077858881 0 375.236753100338 292.720194647202 13.425 340.794813979707 293.116788321168 19.906 0 0 cat,chimp,cow,dog,elephant,guinea_pig,horse,human,macaque,marmoset,mouse,orangutan,panda,pig,rabbit,rat, antisense non_coding A549@1.71093,AG04450@2.77163,BJ@1.75492,GM12878@1.41949,H1HESC@0.0073755,HELAS3@2.01356,HEPG2@0.508454,HMEC@2.83496,HSMM@0.830088,HUVEC@4.46324,K562@0.20451,MCF7@0.95889,NHEK@10.164,NHLF@1.07067,SKNSHRA@0.003562, 0 0 0 0 ENSG00000240154.4 ENST00000518088.1 chr7:27147396-27161792 3 506 13886 exonic 4.03 0 0,1,1 0 0,0,0 115.201581027668 180.490782082673 491.946 129.788537549407 218.918839118537 499.957 130.152173913043 209.006913437995 490.801 0 0 cat,chimp,cow,dog,elephant,guinea_pig,horse,human,macaque,marmoset,orangutan,pig,rat, antisense antisense A549@0.247373,AG04450@0.113559,BJ@0.041527,GM12878@0.002228,H1HESC@0,HELAS3@0.119116,HEPG2@0.267101,HMEC@0.116813,HSMM@0.0442775,HUVEC@0.266726,K562@0.018547,MCF7@0,NHEK@0.0312843,NHLF@0.0772765,SKNSHRA@0, 117 2 70 2 ENSG00000253552.1 ENST00000522193.1 chr7:27153555-27161818 2 337 7924 exonic 4.03 0 0,1,1 0 0,0,0 71.8842729970326 132.989777889955 155.935 138.406528189911 165.745078243311 296.149 126.551928783383 153.788112064614 271.771 0 0 cat,chimp,cow,elephant,horse,human,macaque,marmoset,orangutan,panda,pig, lincRNA processed_transcript A549@0.736743,AG04450@0.577238,BJ@0.043353,GM12878@0.0042605,H1HESC@0,HELAS3@0.069874,HEPG2@0.153225,HMEC@0.509837,HSMM@0.121624,HUVEC@0.490512,K562@0.0014525,MCF7@0.0526205,NHEK@0.0404033,NHLF@0.586487,SKNSHRA@0.004457, 0 0 0 0 ENSG00000253552.1 ENST00000517635.1 chr7:27154967-27162504 2 1961 5574 exonic 4.03 1 1,1,1 1 0,0,0 110.563997960224 113.71672048798 179.34 126.936257011729 150.179763186222 195.222 110.515553289138 148.739863652673 170.108 0 0 cat,chimp,dog,elephant,guinea_pig,horse,human,macaque,marmoset,orangutan,panda,pig, lincRNA processed_transcript A549@0.736743,AG04450@0.577238,BJ@0.043353,GM12878@0.0042605,H1HESC@0,HELAS3@0.069874,HEPG2@0.153225,HMEC@0.509837,HSMM@0.121624,HUVEC@0.490512,K562@0.0014525,MCF7@0.0526205,NHEK@0.0404033,NHLF@0.586487,SKNSHRA@0.004457, 0 0 0 0 ENSG00000240154.4 ENST00000468081.1 chr7:27154967-27162506 2 1963 5574 exonic 4.03 1 1,1,1 1 0,0,0 110.451349974529 113.71672048798 179.34 127.365257259297 150.179763186222 195.222 110.402954661233 148.739863652673 170.108 0 0 cat,chimp,dog,elephant,guinea_pig,horse,human,macaque,marmoset,orangutan,panda,pig, antisense antisense A549@0.247373,AG04450@0.113559,BJ@0.041527,GM12878@0.002228,H1HESC@0,HELAS3@0.119116,HEPG2@0.267101,HMEC@0.116813,HSMM@0.0442775,HUVEC@0.266726,K562@0.018547,MCF7@0,NHEK@0.0312843,NHLF@0.0772765,SKNSHRA@0, 0 0 0 0 ENSG00000253552.1 ENST00000518046.1 chr7:27155024-27161792 2 420 6346 intronic 4.03 0 0,1,1 1 0,0,0 214.952380952381 99.8829183737788 214.11 188.469047619048 134.65868263473 209.756 164.904761904762 132.4618657422 189.981 0 0 cat,chimp,cow,elephant,horse,human,macaque,marmoset,orangutan,panda,pig, lincRNA processed_transcript A549@0.736743,AG04450@0.577238,BJ@0.043353,GM12878@0.0042605,H1HESC@0,HELAS3@0.069874,HEPG2@0.153225,HMEC@0.509837,HSMM@0.121624,HUVEC@0.490512,K562@0.0014525,MCF7@0.0526205,NHEK@0.0404033,NHLF@0.586487,SKNSHRA@0.004457, 0 0 0 0 ENSG00000240154.4 ENST00000519035.1 chr7:27155024-27161792 2 420 6346 intronic 4.03 0 0,1,1 1 0,0,0 214.952380952381 99.8829183737788 214.11 188.469047619048 134.65868263473 209.756 164.904761904762 132.4618657422 189.981 0 0 cat,chimp,cow,elephant,horse,human,macaque,marmoset,orangutan,panda,pig, antisense antisense A549@0.247373,AG04450@0.113559,BJ@0.041527,GM12878@0.002228,H1HESC@0,HELAS3@0.119116,HEPG2@0.267101,HMEC@0.116813,HSMM@0.0442775,HUVEC@0.266726,K562@0.018547,MCF7@0,NHEK@0.0312843,NHLF@0.0772765,SKNSHRA@0, 0 0 0 0 ENSG00000253552.1 ENST00000523364.1 chr7:27160556-27162269 2 987 724 exonic 4.03 0 0,1,1 0 0,0,0 68.5511651469098 118.988950276243 23.762 109.024316109422 220.755524861878 45.318 106.686930091185 205.368784530387 57.191 0 0 cat,chimp,dog,elephant,guinea_pig,horse,human,macaque,marmoset,orangutan,panda,pig, lincRNA processed_transcript A549@0.736743,AG04450@0.577238,BJ@0.043353,GM12878@0.0042605,H1HESC@0,HELAS3@0.069874,HEPG2@0.153225,HMEC@0.509837,HSMM@0.121624,HUVEC@0.490512,K562@0.0014525,MCF7@0.0526205,NHEK@0.0404033,NHLF@0.586487,SKNSHRA@0.004457, 117 2 70 2 ENSG00000240154.4 ENST00000520157.1 chr7:27160584-27161792 2 482 724 intronic 4.03 0 0,1,1 0 0,0,0 60.6514522821577 118.988950276243 23.762 139.823651452282 220.755524861878 45.318 136.726141078838 205.368784530387 57.191 0 0 cat,chimp,cow,elephant,horse,human,macaque,marmoset,orangutan,panda,pig, antisense antisense A549@0.247373,AG04450@0.113559,BJ@0.041527,GM12878@0.002228,H1HESC@0,HELAS3@0.119116,HEPG2@0.267101,HMEC@0.116813,HSMM@0.0442775,HUVEC@0.266726,K562@0.018547,MCF7@0,NHEK@0.0312843,NHLF@0.0772765,SKNSHRA@0, 0 0 0 0 ENSG00000253552.1 ENST00000517550.1 chr7:27161536-27168379 4 2018 4819 exonic 8.90 1 0,0,1 0 0,0,0 213.600594648166 147.572940444076 115.382 228.280971258672 183.335546793941 217.522 210.36521308226 173.241958912638 206.646 0 0 cat,chimp,cow,dog,elephant,guinea_pig,horse,human,macaque,marmoset,mouse,orangutan,panda,pig,rabbit, lincRNA processed_transcript A549@0.736743,AG04450@0.577238,BJ@0.043353,GM12878@0.0042605,H1HESC@0,HELAS3@0.069874,HEPG2@0.153225,HMEC@0.509837,HSMM@0.121624,HUVEC@0.490512,K562@0.0014525,MCF7@0.0526205,NHEK@0.0404033,NHLF@0.586487,SKNSHRA@0.004457, 75 2 43 2 ENSG00000253850.1 ENST00000518625.1 chr7:27161538-27168379 4 2016 4819 exonic 8.90 1 0,0,1 0 0,0,0 213.8125 147.572940444076 115.382 227.896329365079 183.335546793941 218.754 210.243551587302 173.241958912638 207.312 0 0 cat,chimp,cow,dog,elephant,guinea_pig,horse,human,macaque,marmoset,mouse,orangutan,panda,pig,rabbit, lincRNA processed_transcript A549@0.233784,AG04450@0.0416655,BJ@0.0050135,GM12878@0.004523,H1HESC@0,HELAS3@0.090231,HEPG2@0.767204,HMEC@0.01095,HSMM@0.003614,HUVEC@0.023671,K562@0,MCF7@0.021283,NHEK@0.0103457,NHLF@0,SKNSHRA@0, 75 2 43 2 ENSG00000253552.1 ENST00000517641.1 chr7:27162062-27163437 2 581 792 exonic 5.19 0 0,1,0 1 0,0,0 71.4612736660929 124.700757575758 58.94 59.0172117039587 211.834595959596 141.484 57.8209982788296 173.60101010101 125.241 0 0 cat,chimp,dog,horse,human,macaque,marmoset,mouse,orangutan,panda,pig,rabbit, lincRNA processed_transcript A549@0.736743,AG04450@0.577238,BJ@0.043353,GM12878@0.0042605,H1HESC@0,HELAS3@0.069874,HEPG2@0.153225,HMEC@0.509837,HSMM@0.121624,HUVEC@0.490512,K562@0.0014525,MCF7@0.0526205,NHEK@0.0404033,NHLF@0.586487,SKNSHRA@0.004457, 0 0 0 0 ENSG00000253552.1 ENST00000521159.1 chr7:27162167-27173921 4 796 10952 exonic 4.87 0 0,1,0 1 0,0,0 181.277638190955 267.736669101534 61.239 165.422110552764 291.087563915267 132.854 304.22864321608 278.524561723886 116.85 0 0 chimp,cow,horse,human,macaque,marmoset,orangutan,pig,platypus, lincRNA processed_transcript A549@0.736743,AG04450@0.577238,BJ@0.043353,GM12878@0.0042605,H1HESC@0,HELAS3@0.069874,HEPG2@0.153225,HMEC@0.509837,HSMM@0.121624,HUVEC@0.490512,K562@0.0014525,MCF7@0.0526205,NHEK@0.0404033,NHLF@0.586487,SKNSHRA@0.004457, 108 2 61 2 ENSG00000253850.1 ENST00000523528.1 chr7:27162167-27173961 4 836 10952 exonic 4.87 0 0,1,0 1 0,0,0 172.604066985646 267.736669101534 61.239 157.507177033493 291.087563915267 132.854 316.322966507177 278.524561723886 116.85 0 0 chimp,cow,horse,human,macaque,marmoset,orangutan,pig, lincRNA processed_transcript A549@0.233784,AG04450@0.0416655,BJ@0.0050135,GM12878@0.004523,H1HESC@0,HELAS3@0.090231,HEPG2@0.767204,HMEC@0.01095,HSMM@0.003614,HUVEC@0.023671,K562@0,MCF7@0.021283,NHEK@0.0103457,NHLF@0,SKNSHRA@0, 108 2 61 2 ENSG00000253850.1 ENST00000521687.1 chr7:27162195-27168312 3 761 5352 exonic -0.92 1 1,1,1 1 0,0,0 309.261498028909 160.95067264574 70.001 272.586070959264 199.4966367713 137.671 258.948751642576 186.100149476831 122.025 0 0 cat,chimp,cow,dog,elephant,horse,human,macaque,marmoset,mouse,orangutan,pig,rat, lincRNA processed_transcript A549@0.233784,AG04450@0.0416655,BJ@0.0050135,GM12878@0.004523,H1HESC@0,HELAS3@0.090231,HEPG2@0.767204,HMEC@0.01095,HSMM@0.003614,HUVEC@0.023671,K562@0,MCF7@0.021283,NHEK@0.0103457,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000253552.1 ENST00000524048.1 chr7:27162787-27163886 3 490 605 intronic 9.36 0 0,0,1 0 0,0,0 77.0204081632653 0 142.918 178.114285714286 0 210.331 138.042857142857 14.3735537190083 173.979 0 0 cat,chimp,cow,guinea_pig,horse,human,macaque,marmoset,orangutan,pig, lincRNA processed_transcript A549@0.736743,AG04450@0.577238,BJ@0.043353,GM12878@0.0042605,H1HESC@0,HELAS3@0.069874,HEPG2@0.153225,HMEC@0.509837,HSMM@0.121624,HUVEC@0.490512,K562@0.0014525,MCF7@0.0526205,NHEK@0.0404033,NHLF@0.586487,SKNSHRA@0.004457, 0 0 0 0 ENSG00000254369.1 ENST00000518848.1 chr7:27169596-27192195 3 559 22036 exonic 2.04 0 0,1,1 0 0,0,0 350.318425760286 257.149845707025 535.594 381.4114490161 303.325376656381 447.521 486.114490161002 277.217371573788 468.269 0 0 cat,chimp,cow,dog,elephant,horse,human,macaque,marmoset,mouse,opossum,orangutan,panda,pig,platypus,rabbit,rat, antisense antisense A549@0.000927,AG04450@0.031404,BJ@0.0039715,GM12878@0,H1HESC@0,HELAS3@0.000358,HEPG2@0.0160135,HMEC@0.002586,HSMM@0.000229,HUVEC@0.009371,K562@0,MCF7@0.006064,NHEK@0.00245067,NHLF@0.001237,SKNSHRA@0, 0 0 0 0 ENSG00000254369.1 ENST00000521197.1 chr7:27179983-27192316 3 684 11645 encompassing 1.07 1 1,1,1 0 0,0,0 370.748538011696 268.614598540146 289.057 580.138888888889 313.562301416917 383.821 732.451754385965 279.385830828682 358.583 0 0 cow,dog,elephant,horse,human,macaque,marmoset,mouse,opossum,orangutan,panda,pig,rabbit,rat, antisense antisense A549@0.000927,AG04450@0.031404,BJ@0.0039715,GM12878@0,H1HESC@0,HELAS3@0.000358,HEPG2@0.0160135,HMEC@0.002586,HSMM@0.000229,HUVEC@0.009371,K562@0,MCF7@0.006064,NHEK@0.00245067,NHLF@0.001237,SKNSHRA@0, 126 2 78 2 ENSG00000235345.3 ENST00000522418.1 chr7:27179991-27192344 3 704 11645 encompassing 1.07 1 1,1,1 0 0,0,0 372.278409090909 268.614598540146 294.313 582.521306818182 313.562301416917 390.309 747.978693181818 279.385830828682 365.287 0 0 cow,dog,elephant,horse,human,macaque,marmoset,mouse,opossum,orangutan,panda,pig,rabbit,rat, lincRNA processed_transcript A549@0.055857,AG04450@0.259149,BJ@0.0172475,GM12878@0.002611,H1HESC@0,HELAS3@0.0135835,HEPG2@0.0454555,HMEC@0.067299,HSMM@0.0081935,HUVEC@0.222221,K562@0,MCF7@0.0106615,NHEK@0.140236,NHLF@0.107801,SKNSHRA@0, 126 2 78 2 ENSG00000235345.3 ENST00000480355.2 chr7:27186782-27193907 3 2349 4772 exonic 5.58 1 0,1,1 0 0,0,0 212.567475521499 159.553017602682 0 272.445295870583 186.107711651299 27.786 582.410387398893 165.81307627829 30.359 0 0 chimp,cow,dog,horse,human,macaque,marmoset,mouse,orangutan,panda,pig,rabbit,rat, lincRNA processed_transcript A549@0.055857,AG04450@0.259149,BJ@0.0172475,GM12878@0.002611,H1HESC@0,HELAS3@0.0135835,HEPG2@0.0454555,HMEC@0.067299,HSMM@0.0081935,HUVEC@0.222221,K562@0,MCF7@0.0106615,NHEK@0.140236,NHLF@0.107801,SKNSHRA@0, 0 0 0 0 ENSG00000254369.1 ENST00000518947.1 chr7:27186782-27193907 3 2349 4772 exonic 5.58 1 0,1,1 0 0,0,0 212.567475521499 159.553017602682 0 272.445295870583 186.107711651299 27.786 582.410387398893 165.81307627829 30.359 0 0 chimp,cow,dog,horse,human,macaque,marmoset,mouse,orangutan,panda,pig,rabbit,rat, antisense antisense A549@0.000927,AG04450@0.031404,BJ@0.0039715,GM12878@0,H1HESC@0,HELAS3@0.000358,HEPG2@0.0160135,HMEC@0.002586,HSMM@0.000229,HUVEC@0.009371,K562@0,MCF7@0.006064,NHEK@0.00245067,NHLF@0.001237,SKNSHRA@0, 0 0 0 0 ENSG00000235345.3 ENST00000517645.1 chr7:27187102-27192322 3 618 4598 exonic 1.07 1 0,0,1 0 0,0,0 347.899676375405 138.609177903436 172.546 557.131067961165 161.854719443236 185.649 726.404530744337 139.883862548934 186.183 0 0 cow,dog,elephant,horse,human,macaque,marmoset,mouse,opossum,orangutan,panda,pig,rabbit,rat, lincRNA processed_transcript A549@0.055857,AG04450@0.259149,BJ@0.0172475,GM12878@0.002611,H1HESC@0,HELAS3@0.0135835,HEPG2@0.0454555,HMEC@0.067299,HSMM@0.0081935,HUVEC@0.222221,K562@0,MCF7@0.0106615,NHEK@0.140236,NHLF@0.107801,SKNSHRA@0, 0 0 0 0 ENSG00000254369.1 ENST00000521231.1 chr7:27187102-27192322 3 618 4598 exonic 1.07 1 0,0,1 0 0,0,0 347.899676375405 138.609177903436 172.546 557.131067961165 161.854719443236 185.649 726.404530744337 139.883862548934 186.183 0 0 cow,dog,elephant,horse,human,macaque,marmoset,mouse,opossum,orangutan,panda,pig,rabbit,rat, antisense antisense A549@0.000927,AG04450@0.031404,BJ@0.0039715,GM12878@0,H1HESC@0,HELAS3@0.000358,HEPG2@0.0160135,HMEC@0.002586,HSMM@0.000229,HUVEC@0.009371,K562@0,MCF7@0.006064,NHEK@0.00245067,NHLF@0.001237,SKNSHRA@0, 0 0 0 0 ENSG00000235345.3 ENST00000518086.1 chr7:27189671-27192345 2 2061 611 intergenic 1.07 1 0,0,1 0 0,0,0 184.868510431829 16.9247135842881 64.716 222.789907811742 58.5973813420622 352.767 251.902959728287 30.5204582651391 378.891 0 0 cow,dog,elephant,horse,human,macaque,marmoset,mouse,pig,rabbit,rat, lincRNA processed_transcript A549@0.055857,AG04450@0.259149,BJ@0.0172475,GM12878@0.002611,H1HESC@0,HELAS3@0.0135835,HEPG2@0.0454555,HMEC@0.067299,HSMM@0.0081935,HUVEC@0.222221,K562@0,MCF7@0.0106615,NHEK@0.140236,NHLF@0.107801,SKNSHRA@0, 0 0 0 0 ENSG00000254369.1 ENST00000524304.1 chr7:27189671-27192345 2 2061 611 intergenic 1.07 1 0,0,1 0 0,0,0 184.868510431829 16.9247135842881 64.716 222.789907811742 58.5973813420622 352.767 251.902959728287 30.5204582651391 378.891 0 0 cow,dog,elephant,horse,human,macaque,marmoset,mouse,pig,rabbit,rat, antisense antisense A549@0.000927,AG04450@0.031404,BJ@0.0039715,GM12878@0,H1HESC@0,HELAS3@0.000358,HEPG2@0.0160135,HMEC@0.002586,HSMM@0.000229,HUVEC@0.009371,K562@0,MCF7@0.006064,NHEK@0.00245067,NHLF@0.001237,SKNSHRA@0, 0 0 0 0 ENSG00000253187.1 ENST00000519694.1 chr7:27208238-27210992 2 439 2313 exonic -1.53 0 0,1,1 1 0,0,0 62.6013667425968 282.25897103329 7.56 72.744874715262 358.559014267185 18.92 60.8678815489749 320.326848249027 22.678 0 0 chimp,cow,dog,elephant,guinea_pig,horse,human,macaque,marmoset,orangutan,panda,pig,rabbit, antisense antisense A549@0.0983375,AG04450@0,BJ@1.05465,GM12878@0,H1HESC@0,HELAS3@0.30631,HEPG2@0.026528,HMEC@0.010721,HSMM@0.484922,HUVEC@1.0874,K562@0,MCF7@0,NHEK@1.57814,NHLF@0.003418,SKNSHRA@0, 0 0 0 0 ENSG00000253187.1 ENST00000522277.1 chr7:27208518-27209320 2 488 312 exonic 3.73 0 0,1,1 1 0,0,0 206.516393442623 69.4935897435897 12.88 293.258196721311 105.839743589744 24.816 232.563524590164 105.983974358974 25.44 0 0 chimp,cow,dog,elephant,guinea_pig,horse,human,marmoset,mouse,opossum,orangutan,panda,pig,rabbit,rat, antisense antisense A549@0.0983375,AG04450@0,BJ@1.05465,GM12878@0,H1HESC@0,HELAS3@0.30631,HEPG2@0.026528,HMEC@0.010721,HSMM@0.484922,HUVEC@1.0874,K562@0,MCF7@0,NHEK@1.57814,NHLF@0.003418,SKNSHRA@0, 0 0 0 0 ENSG00000253289.1 ENST00000519935.1 chr7:27208518-27211534 3 1158 1854 exonic 3.73 0 1,1,1 1 0,0,0 278.911053540587 297.780474649407 12.88 305.946459412781 371.901833872708 24.816 235.701208981002 338.663430420712 25.44 0 0 chimp,cow,dog,elephant,guinea_pig,horse,human,macaque,mouse,orangutan,panda,pig,rabbit,rat, antisense antisense A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0.349602,HUVEC@0,K562@0,MCF7@0,NHEK@0.00403333,NHLF@0.0022045,SKNSHRA@0, 94 2 0 0 ENSG00000253187.1 ENST00000519995.1 chr7:27208547-27211534 3 1129 1854 exonic 3.73 0 1,1,1 1 0,0,0 286.075287865368 297.780474649407 12.88 313.805137289637 371.901833872708 24.816 241.755535872454 338.663430420712 25.44 0 0 chimp,cow,dog,elephant,guinea_pig,horse,human,macaque,mouse,orangutan,panda,pig,rabbit,rat, antisense antisense A549@0.0983375,AG04450@0,BJ@1.05465,GM12878@0,H1HESC@0,HELAS3@0.30631,HEPG2@0.026528,HMEC@0.010721,HSMM@0.484922,HUVEC@1.0874,K562@0,MCF7@0,NHEK@1.57814,NHLF@0.003418,SKNSHRA@0, 94 2 0 0 ENSG00000253289.1 ENST00000522724.1 chr7:27208713-27211140 2 883 1542 exonic 7.06 0 1,1,1 0 0,0,0 240.869762174405 343.970817120623 12.88 278.737259343148 425.735408560311 34.308 226.238958097395 385.742542153048 31.94 0 0 chimp,cow,dog,elephant,guinea_pig,horse,human,marmoset,mouse,orangutan,panda,pig,rabbit,rat, antisense antisense A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0.349602,HUVEC@0,K562@0,MCF7@0,NHEK@0.00403333,NHLF@0.0022045,SKNSHRA@0, 0 0 55 2 ENSG00000253187.1 ENST00000523790.1 chr7:27208713-27211384 2 1127 1542 exonic 7.06 0 1,1,1 0 0,0,0 280.607808340728 343.970817120623 12.88 288.839396628217 425.735408560311 34.308 234.73735581189 385.742542153048 31.94 0 0 chimp,cow,dog,elephant,guinea_pig,horse,human,mouse,orangutan,panda,pig,rabbit,rat, antisense antisense A549@0.0983375,AG04450@0,BJ@1.05465,GM12878@0,H1HESC@0,HELAS3@0.30631,HEPG2@0.026528,HMEC@0.010721,HSMM@0.484922,HUVEC@1.0874,K562@0,MCF7@0,NHEK@1.57814,NHLF@0.003418,SKNSHRA@0, 0 0 55 2 ENSG00000240990.4 ENST00000520360.1 chr7:27224137-27228786 3 1286 3359 exonic 9.76 0 0,1,1 1 0,0,0 417.05132192846 274.130693658827 348.783 549.877916018663 298.801131289074 776.133 489.243390357698 291.440905031259 406.719 0 0 cat,chimp,dog,elephant,guinea_pig,horse,human,macaque,marmoset,mouse,orangutan,panda,pig,rabbit,rat, antisense antisense A549@0.278631,AG04450@0.021124,BJ@2.49515,GM12878@0.007258,H1HESC@0,HELAS3@1.59231,HEPG2@0.350527,HMEC@0.00867,HSMM@1.99204,HUVEC@4.60519,K562@0,MCF7@0.651823,NHEK@0.0344233,NHLF@0.0191245,SKNSHRA@0.004704, 0 0 0 0 ENSG00000240990.4 ENST00000522863.1 chr7:27224290-27228786 5 1718 2770 exonic 9.76 0 0,1,1 0 0,0,0 418.179860302678 251.641155234657 388.823 517.062281722934 247.968953068592 650.792 477.848661233993 243.008303249097 519.633 0 0 cat,chimp,cow,dog,guinea_pig,horse,human,macaque,marmoset,mouse,orangutan,panda,pig,rabbit,rat, antisense antisense A549@0.278631,AG04450@0.021124,BJ@2.49515,GM12878@0.007258,H1HESC@0,HELAS3@1.59231,HEPG2@0.350527,HMEC@0.00867,HSMM@1.99204,HUVEC@4.60519,K562@0,MCF7@0.651823,NHEK@0.0344233,NHLF@0.0191245,SKNSHRA@0.004704, 0 0 0 0 ENSG00000240990.4 ENST00000522674.1 chr7:27225027-27228912 2 1547 2336 intergenic 9.76 1 1,1,1 1 0,0,0 226.022624434389 241.838613013699 560.432 279.957983193277 230.938784246575 839.635 241.657401422107 229.808647260274 782.249 0 0 cat,chimp,dog,guinea_pig,horse,human,macaque,marmoset,mouse,orangutan,panda,pig,rabbit,rat, antisense antisense A549@0.278631,AG04450@0.021124,BJ@2.49515,GM12878@0.007258,H1HESC@0,HELAS3@1.59231,HEPG2@0.350527,HMEC@0.00867,HSMM@1.99204,HUVEC@4.60519,K562@0,MCF7@0.651823,NHEK@0.0344233,NHLF@0.0191245,SKNSHRA@0.004704, 0 0 0 0 ENSG00000240990.4 ENST00000517723.1 chr7:27225032-27228786 3 928 2822 intergenic 9.76 0 0,1,1 1 0,0,0 276.316810344828 232.406094968108 561.352 305.46875 241.497519489724 838.485 266.827586206897 232.617292700213 781.764 0 0 cat,chimp,cow,dog,elephant,guinea_pig,horse,human,macaque,marmoset,mouse,orangutan,panda,pig,rabbit,rat, antisense antisense A549@0.278631,AG04450@0.021124,BJ@2.49515,GM12878@0.007258,H1HESC@0,HELAS3@1.59231,HEPG2@0.350527,HMEC@0.00867,HSMM@1.99204,HUVEC@4.60519,K562@0,MCF7@0.651823,NHEK@0.0344233,NHLF@0.0191245,SKNSHRA@0.004704, 0 0 0 0 ENSG00000240990.4 ENST00000520395.1 chr7:27225153-27226740 2 1167 418 intergenic 3.14 0 0,1,1 0 0,0,0 502.98971722365 5.72727272727273 601.256 298.552699228792 34.9688995215311 799.775 260.996572407883 33.3971291866029 768.433 0 0 cat,chimp,cow,dog,guinea_pig,horse,human,macaque,marmoset,mouse,orangutan,panda,pig,rabbit,rat, antisense non_coding A549@0.278631,AG04450@0.021124,BJ@2.49515,GM12878@0.007258,H1HESC@0,HELAS3@1.59231,HEPG2@0.350527,HMEC@0.00867,HSMM@1.99204,HUVEC@4.60519,K562@0,MCF7@0.651823,NHEK@0.0344233,NHLF@0.0191245,SKNSHRA@0.004704, 0 0 0 0 ENSG00000253508.1 ENST00000523331.1 chr7:27226192-27233067 2 554 6319 intergenic -1.85 0 0,0,0 0 0,0,0 0 125.253995885425 60.024 6.90974729241877 138.319670833993 125.852 8.0956678700361 131.882101598354 148.916 0 0 cat,chimp,cow,dog,elephant,horse,human,macaque,marmoset,orangutan,panda,pig, lincRNA lincRNA A549@0.039845,AG04450@0,BJ@1.1657,GM12878@0,H1HESC@0,HELAS3@0.0231575,HEPG2@0.013725,HMEC@0,HSMM@0.037746,HUVEC@0.0552085,K562@0,MCF7@0.065928,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000240990.4 ENST00000479766.1 chr7:27227438-27228839 2 820 579 intergenic 1.30 1 0,1,1 0 0,0,0 346.691463414634 48.8169257340242 415.927 308.236585365854 42.3678756476684 410.666 274.424390243902 29.5423143350604 420.817 0 0 cat,chimp,dog,elephant,guinea_pig,horse,human,macaque,marmoset,mouse,orangutan,panda,pig,rabbit,rat, antisense antisense A549@0.278631,AG04450@0.021124,BJ@2.49515,GM12878@0.007258,H1HESC@0,HELAS3@1.59231,HEPG2@0.350527,HMEC@0.00867,HSMM@1.99204,HUVEC@4.60519,K562@0,MCF7@0.651823,NHEK@0.0344233,NHLF@0.0191245,SKNSHRA@0.004704, 0 0 0 0 ENSG00000243766.1 ENST00000421733.1 chr7:27238194-27240855 2 779 1880 intronic -1.26 0 0,1,1 0 0,0,0 3.18356867779204 218.039361702128 329.62 192.182284980745 413.070212765957 353.027 199.697047496791 463.943617021277 310.672 0 0 cat,chimp,cow,dog,elephant,guinea_pig,horse,human,macaque,marmoset,mouse,orangutan,panda,pig,rabbit, lincRNA non_coding A549@0.192262,AG04450@0,BJ@0.238816,GM12878@0,H1HESC@0,HELAS3@0.220046,HEPG2@0.061657,HMEC@0,HSMM@0.0640535,HUVEC@0,K562@0,MCF7@0.024544,NHEK@0,NHLF@0,SKNSHRA@0, 114 2 67 2 ENSG00000255024.1 ENST00000525466.1 chr7:27238194-27240855 2 779 1880 intronic -1.26 0 0,1,1 0 0,0,0 3.18356867779204 218.039361702128 329.62 192.182284980745 413.070212765957 353.027 199.697047496791 463.943617021277 310.672 0 0 cat,chimp,cow,dog,elephant,guinea_pig,horse,human,macaque,marmoset,mouse,orangutan,panda,pig,rabbit, lincRNA processed_transcript A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 114 2 67 2 ENSG00000243766.1 ENST00000472494.1 chr7:27240056-27242441 2 2283 100 intergenic 3.24 0 0,1,1 0 0,0,0 100.82873412177 0 219.96 349.940429259746 44.31 523.865 343.674551029347 47.39 608.852 0 0 cat,chimp,cow,elephant,guinea_pig,human,macaque,marmoset,orangutan, lincRNA non_coding A549@0.192262,AG04450@0,BJ@0.238816,GM12878@0,H1HESC@0,HELAS3@0.220046,HEPG2@0.061657,HMEC@0,HSMM@0.0640535,HUVEC@0,K562@0,MCF7@0.024544,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000253769.1 ENST00000522259.1 chr7:27241640-27246853 2 2601 2610 intergenic 0.66 0 0,0,0 0 0,0,0 18.0488273740869 90.4061302681992 73.678 52.4663590926567 110.052107279693 67.708 43.6047673971549 92.4842911877395 57.67 0 0 cat,chimp,cow,dog,horse,human,macaque,marmoset,orangutan,panda,rabbit, lincRNA processed_transcript A549@0.0191655,AG04450@0,BJ@0.0753845,GM12878@0,H1HESC@0,HELAS3@0.0227055,HEPG2@0.0051985,HMEC@0,HSMM@0.0083545,HUVEC@0.0020775,K562@0,MCF7@0.0180525,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000253769.1 ENST00000521028.1 chr7:27241649-27246878 2 3155 2072 intergenic 3.24 0 0,0,1 0 0,0,0 53.0256735340729 54.1920849420849 76.99 91.841204437401 62.5641891891892 72.19 74.8877971473851 55.6389961389961 61.603 0 0 chimp,dog,horse,human,macaque,marmoset,orangutan,panda,rabbit, lincRNA processed_transcript A549@0.0191655,AG04450@0,BJ@0.0753845,GM12878@0,H1HESC@0,HELAS3@0.0227055,HEPG2@0.0051985,HMEC@0,HSMM@0.0083545,HUVEC@0.0020775,K562@0,MCF7@0.0180525,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000253308.1 ENST00000523608.1 chr7:27278865-27280847 2 752 1228 intergenic 1.68 1 0,1,1 0 0,0,0 0 0 0 34.0558510638298 26.7231270358306 21.25 34.6688829787234 26.3965798045603 19.292 0 0 cat,chimp,cow,dog,elephant,guinea_pig,horse,human,macaque,marmoset,mouse,orangutan,panda,pig, antisense antisense A549@0.004473,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000253405.1 ENST00000517726.1 chr7:27281048-27286848 4 476 5318 exonic 1.45 0 0,0,1 0 0,0,0 14.7857142857143 226.949605114705 82.246 41.296218487395 241.423279428357 130.089 8.95588235294118 227.384355020684 100.57 0 0 cat,chimp,cow,dog,elephant,guinea_pig,horse,human,macaque,marmoset,orangutan,panda,pig,rabbit,rat, antisense antisense A549@0.005389,AG04450@0,BJ@0,GM12878@0,H1HESC@0.008933,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000253405.1 ENST00000519050.1 chr7:27281549-27282581 2 574 456 exonic 4.46 0 0,0,0 0 0,0,0 425.365853658537 285.94298245614 278.734 503.933797909408 77.7412280701754 347.04 489.391986062718 76.8004385964912 295.539 0 0 chimp,cow,dog,elephant,guinea_pig,horse,human,macaque,marmoset,mouse,opossum,orangutan,panda,pig,platypus,rabbit,rat, antisense antisense A549@0.005389,AG04450@0,BJ@0,GM12878@0,H1HESC@0.008933,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000253405.1 ENST00000519218.1 chr7:27281569-27283578 3 551 1454 exonic -0.22 0 0,0,0 0 0,0,0 252.090744101633 352.213204951857 106.8 319.150635208711 338.247592847318 94.668 293.395644283122 306.303301237964 88.329 0 0 cat,chimp,cow,dog,elephant,guinea_pig,horse,human,macaque,mouse,orangutan,panda,pig,rabbit,rat, antisense antisense A549@0.005389,AG04450@0,BJ@0,GM12878@0,H1HESC@0.008933,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000253324.1 ENST00000518886.1 chr7:27286987-27290112 2 378 2745 intergenic 0 1 0,0,0 0 0,1,0 25.994708994709 110.287431693989 112.196 48.5925925925926 151.443715846995 168.25 47.462962962963 142.485974499089 127.669 0 0 cat,chimp,cow,dog,horse,human,macaque,marmoset,orangutan,panda,pig,rabbit, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000244597.1 ENST00000489284.1 chr7:27401462-27448577 4 545 46564 intergenic 1.88 0 0,1,0 0 0,0,0 24.7119266055046 35.7949703633708 0 29.2935779816514 44.3214500472468 0 22.7522935779817 43.4447641955159 0 0 0 cat,chimp,cow,dog,elephant,horse,human,macaque,marmoset,mouse,orangutan,panda,pig, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0.0221245,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000224322.1 ENST00000412413.1 chr7:27401462-27449557 5 562 47525 intergenic 1.88 0 0,1,0 0 0,0,0 23.9644128113879 35.0711625460284 0 28.4074733096085 43.4252288269332 0 22.0640569395018 42.5662703840084 0 0 0 cat,chimp,cow,dog,elephant,horse,human,macaque,marmoset,mouse,orangutan,panda,pig, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000233400.1 ENST00000436543.1 chr7:27655593-27667109 3 1307 10205 intronic -1.27 0 0,1,1 0 0,1,0 0 0 0 0 1.88760411562959 0 0 2.03557079862812 0 0 0 NA lincRNA lincRNA A549@0.006135,AG04450@0,BJ@0,GM12878@0.0080435,H1HESC@0.092201,HELAS3@0.0072385,HEPG2@0.016143,HMEC@0,HSMM@0,HUVEC@0,K562@0.098602,MCF7@0.003139,NHEK@0,NHLF@0,SKNSHRA@0.003464, 0 0 0 0 ENSG00000229893.1 ENST00000441955.1 chr7:27773014-27780014 2 857 6141 exonic 11.94 0 0,0,0 0 0,0,0 0 37.5538185963198 0 15.7257876312719 14.5574010747435 10.565 17.5600933488915 18.6152092493079 12.619 0 0 chimp,horse,human,macaque,orangutan,panda, antisense antisense A549@0.051373,AG04450@0.0026095,BJ@0.02003,GM12878@0.0416615,H1HESC@0.0357495,HELAS3@0.0836415,HEPG2@0.0162725,HMEC@0,HSMM@0.0047905,HUVEC@0.0087695,K562@0.111738,MCF7@0.030904,NHEK@0.018066,NHLF@0,SKNSHRA@0.092825, 0 0 0 0 ENSG00000234336.1 ENST00000455963.1 chr7:28219941-28280383 3 606 59832 exonic -0.75 0 0,1,0 0 0,0,0 138.706270627063 13.6115790881134 78.66 157.80198019802 12.7663123412221 170.027 150.03300330033 14.3076614520658 185 0 0 chimp,human,mouse,orangutan,rat, antisense antisense A549@0.002028,AG04450@0.0608695,BJ@0.124584,GM12878@0,H1HESC@0.0052305,HELAS3@0.0084975,HEPG2@0,HMEC@0.002462,HSMM@0,HUVEC@0.0053355,K562@0.014657,MCF7@0,NHEK@0.00452333,NHLF@0.105281,SKNSHRA@0.0054595, 0 0 0 0 ENSG00000234336.1 ENST00000436758.1 chr7:28220076-28280350 4 544 59724 exonic -6.72 0 0,1,0 0 0,0,0 93.5367647058823 13.5146339829884 118.56 109.772058823529 12.6311700488916 210.41 120.838235294118 14.1706181769473 212.252 0 0 chimp,cow,human,macaque,marmoset,mouse,orangutan,rat, antisense antisense A549@0.002028,AG04450@0.0608695,BJ@0.124584,GM12878@0,H1HESC@0.0052305,HELAS3@0.0084975,HEPG2@0,HMEC@0.002462,HSMM@0,HUVEC@0.0053355,K562@0.014657,MCF7@0,NHEK@0.00452333,NHLF@0.105281,SKNSHRA@0.0054595, 0 0 0 0 ENSG00000234336.1 ENST00000444500.1 chr7:28279503-28281515 2 1661 349 intergenic 0.44 1 0,0,0 0 0,0,0 0 0 11.565 0 0 17.42 0 0 17.917 0 0 chimp,human,macaque,marmoset,orangutan, antisense antisense A549@0.002028,AG04450@0.0608695,BJ@0.124584,GM12878@0,H1HESC@0.0052305,HELAS3@0.0084975,HEPG2@0,HMEC@0.002462,HSMM@0,HUVEC@0.0053355,K562@0.014657,MCF7@0,NHEK@0.00452333,NHLF@0.105281,SKNSHRA@0.0054595, 0 0 0 0 ENSG00000176734.3 ENST00000322982.3 chr7:28992974-28997934 1 4960 0 intergenic 162.70 1 0,1,0 1 0,0,1 374.07439516129 0 220.821 285.491733870968 0 259.712 228.440725806452 0 202.33 0 0 chimp,cow,dog,elephant,horse,human,marmoset,orangutan,panda,pig, processed_transcript processed_transcript A549@0.0012515,AG04450@0.0233465,BJ@0.010639,GM12878@0,H1HESC@1.59121,HELAS3@0.037021,HEPG2@0.088986,HMEC@0.011637,HSMM@0.0424205,HUVEC@0.162035,K562@0,MCF7@0.0632725,NHEK@0.00485067,NHLF@0.0396055,SKNSHRA@0.736526, 0 0 0 0 ENSG00000228421.1 ENST00000425873.1 chr7:28995866-28998864 3 568 2426 intergenic 7.47 0 0,1,0 0 0,0,0 197.591549295775 479.317394888706 385.205 228.369718309859 416.75144270404 316.649 193.580985915493 315.88417147568 261.63 0 0 cat,chimp,cow,dog,elephant,guinea_pig,horse,human,macaque,marmoset,mouse,orangutan,panda,pig,rabbit,rat, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0.174274,HELAS3@0.078087,HEPG2@0.0645085,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0.013987,NHEK@0,NHLF@0,SKNSHRA@0.025923, 0 0 0 0 ENSG00000228421.1 ENST00000436594.1 chr7:28997283-28998961 2 586 1090 intergenic -1.63 0 0,0,0 0 0,0,0 224.262798634812 480.63119266055 567.132 201.78156996587 439.736697247706 471.018 167.78156996587 303.003669724771 393.21 0 0 cat,chimp,cow,dog,elephant,guinea_pig,horse,human,macaque,marmoset,mouse,orangutan,panda,pig,rat, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0.174274,HELAS3@0.078087,HEPG2@0.0645085,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0.013987,NHEK@0,NHLF@0,SKNSHRA@0.025923, 0 0 0 0 ENSG00000233517.1 ENST00000411479.1 chr7:29026644-29028515 2 576 1293 intergenic -2.48 0 0,0,0 0 0,0,0 0 0 0 1.40625 0 1.841 1.69270833333333 0 1.855 0 0 cat,chimp,cow,dog,elephant,guinea_pig,horse,human,macaque,marmoset,orangutan,panda,pig, antisense antisense A549@0,AG04450@0.008149,BJ@0,GM12878@0,H1HESC@0.041026,HELAS3@0,HEPG2@0.015057,HMEC@0,HSMM@0.00356,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0.0033385,SKNSHRA@0.019244, 0 0 0 0 ENSG00000228093.2 ENST00000458684.1 chr7:29040587-29049868 4 479 8796 intronic -1.75 1 0,0,0 0 0,0,0 0 24.0541155070487 20.832 39.7578288100209 26.819008640291 12.738 44.7640918580376 28.337653478854 16.868 0 0 cat,chimp,dog,guinea_pig,horse,human,macaque,marmoset,orangutan,rabbit, antisense antisense A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0.0047055, 0 0 0 0 ENSG00000228093.2 ENST00000457891.2 chr7:29040659-29049815 3 243 8909 intronic -1.75 1 0,0,0 0 0,0,0 0 23.7490178471209 20.832 52.5267489711934 26.4788416208329 12.738 59.0205761316872 27.9782242675946 16.868 0 0 cat,chimp,cow,dog,elephant,guinea_pig,horse,human,macaque,marmoset,mouse,orangutan,panda,pig,rabbit,rat, antisense antisense A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0.0047055, 0 0 0 0 ENSG00000229452.1 ENST00000416513.1 chr7:29119900-29122143 3 386 1853 intronic -1.80 1 0,0,1 0 0,0,0 16.4766839378238 5.14840798704803 0 39.2176165803109 35.0966001079331 0 40.6450777202073 34.9314624932542 0 0 0 chimp,human,macaque,marmoset,orangutan, antisense antisense A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0.022595,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000243912.1 ENST00000443025.1 chr7:29164649-29167788 3 509 2626 intronic -3.02 0 0,0,0 0 0,0,0 0 0 0 0 4.33663366336634 28.062 0 4.70944402132521 33.1 0 0 chimp,human,macaque,marmoset,orangutan,pig, processed_transcript retained_intron A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0.0233875,HELAS3@0.39223,HEPG2@0.270626,HMEC@0,HSMM@0,HUVEC@0,K562@0.000398,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000235669.1 ENST00000446246.1 chr7:29239156-29248586 3 795 8631 intronic 2.73 0 0,0,1 0 0,0,0 0 8.75576410612907 0 16.8125786163522 21.3182713474684 49.767 18.2251572327044 19.4239369713822 51.032 0 0 cat,chimp,cow,elephant,horse,human,macaque,marmoset,orangutan,panda,pig, antisense antisense A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0.0732295,HEPG2@0.433345,HMEC@0.010262,HSMM@0,HUVEC@0,K562@0.0058195,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000223813.1 ENST00000447171.1 chr7:29554385-29603279 3 886 48004 intergenic -6.92 0 1,1,1 1 0,0,0 0 0.561015748687609 49.948 24.3476297968397 2.31620281643196 40.304 28.6580135440181 2.81149487542705 35.973 0 0 cat,guinea_pig,horse,human,macaque,marmoset,orangutan,pig, lincRNA processed_transcript A549@0.357012,AG04450@0.004618,BJ@0.032949,GM12878@0,H1HESC@0.69399,HELAS3@0.304655,HEPG2@0.535071,HMEC@0.14677,HSMM@0.0336515,HUVEC@0.164825,K562@0.0322415,MCF7@0.909889,NHEK@0.127638,NHLF@0,SKNSHRA@0.0647285, 0 0 0 0 ENSG00000223813.1 ENST00000450540.1 chr7:29554707-29603286 2 508 48069 intergenic -10.26 0 0,1,0 1 0,0,0 0 0.560257130375086 49.948 0 2.31307079406686 40.304 0 2.80769310782417 35.973 0 0 cat,cow,guinea_pig,horse,human,macaque,marmoset,orangutan,panda,pig, lincRNA processed_transcript A549@0.357012,AG04450@0.004618,BJ@0.032949,GM12878@0,H1HESC@0.69399,HELAS3@0.304655,HEPG2@0.535071,HMEC@0.14677,HSMM@0.0336515,HUVEC@0.164825,K562@0.0322415,MCF7@0.909889,NHEK@0.127638,NHLF@0,SKNSHRA@0.0647285, 0 0 0 0 ENSG00000225264.2 ENST00000442865.1 chr7:29638411-29724871 2 588 85870 intergenic 8.86 0 0,0,0 1 0,0,0 0 1.85163619424712 0 0 4.14760684756026 0 370.743197278912 13.5995691161057 293.539 0 0 chimp,cow,dog,elephant,human,macaque,marmoset,mouse,opossum,orangutan,rabbit,rat, processed_transcript processed_transcript A549@0.324299,AG04450@0.0322515,BJ@0.188982,GM12878@0,H1HESC@0.243535,HELAS3@0.430469,HEPG2@0.24804,HMEC@0.07553,HSMM@0.17342,HUVEC@0.221872,K562@0.769786,MCF7@0.214706,NHEK@0.0435183,NHLF@0.108407,SKNSHRA@0.7713, 0 0 0 0 ENSG00000225264.2 ENST00000426767.1 chr7:29690659-29724754 2 661 33432 intergenic 8.86 0 0,1,1 1 0,0,0 0 1.29055994256999 0 0 4.67175161521895 0 231.20726172466 20.4868688681503 358.708 0 0 chimp,human,orangutan,rabbit, processed_transcript processed_transcript A549@0.324299,AG04450@0.0322515,BJ@0.188982,GM12878@0,H1HESC@0.243535,HELAS3@0.430469,HEPG2@0.24804,HMEC@0.07553,HSMM@0.17342,HUVEC@0.221872,K562@0.769786,MCF7@0.214706,NHEK@0.0435183,NHLF@0.108407,SKNSHRA@0.7713, 0 0 0 0 ENSG00000227014.1 ENST00000422239.1 chr7:30028216-30065216 4 889 36105 intronic 3.59 0 0,1,0 0 0,0,0 0 12.3305636338457 28.158 0 16.8112726769146 31.559 0.512935883014623 24.1082675529705 37.075 0 0 chimp,cow,elephant,horse,human,macaque,marmoset,orangutan, antisense antisense A549@0.038493,AG04450@0.01819,BJ@0.0678895,GM12878@0.149119,H1HESC@0.0144265,HELAS3@0.004674,HEPG2@0.072819,HMEC@0.018007,HSMM@0.027258,HUVEC@0.0121105,K562@0.0044105,MCF7@0.17656,NHEK@0.0544733,NHLF@0.0441965,SKNSHRA@0.076181, 0 0 0 0 ENSG00000227014.1 ENST00000419103.1 chr7:30028216-30065276 3 615 36441 intronic -1.26 0 0,1,1 0 0,0,0 0 12.2168711067205 28.158 0 16.6562662934607 31.559 3.11219512195122 23.8859800773854 37.075 0 0 chimp,elephant,horse,human,macaque,marmoset,orangutan, antisense antisense A549@0.038493,AG04450@0.01819,BJ@0.0678895,GM12878@0.149119,H1HESC@0.0144265,HELAS3@0.004674,HEPG2@0.072819,HMEC@0.018007,HSMM@0.027258,HUVEC@0.0121105,K562@0.0044105,MCF7@0.17656,NHEK@0.0544733,NHLF@0.0441965,SKNSHRA@0.076181, 0 0 0 0 ENSG00000231519.1 ENST00000433088.1 chr7:30109274-30114731 3 515 4938 intronic 0 0 0,0,0 0 0,0,0 0 28.2367355204536 0 0 24.9414742810855 4.924 0 25.9372215471851 8.301 0 0 cat,chimp,cow,elephant,guinea_pig,horse,human,macaque,marmoset,orangutan, antisense antisense A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000230751.1 ENST00000415934.1 chr7:30180486-30181033 2 435 110 intronic 0 0 0,0,0 0 0,0,0 0 0 0 0 0 1.24 0 0 1.255 0 0 chimp,human,macaque,marmoset,orangutan, sense_intronic sense_intronic A549@0.073439,AG04450@0.028669,BJ@0.183685,GM12878@0.007787,H1HESC@0.0513095,HELAS3@0.0297585,HEPG2@0.214882,HMEC@0.009179,HSMM@0.0650845,HUVEC@0.071122,K562@0.106081,MCF7@0.012644,NHEK@0.245368,NHLF@0,SKNSHRA@0.316678, 0 0 0 0 ENSG00000227017.1 ENST00000430537.1 chr7:30216003-30218630 2 672 1953 intergenic 0.70 0 0,0,1 0 0,0,0 0 0 0 0 1.52380952380952 7.936 0 1.59139784946237 16.503 0 0 cat,chimp,dog,horse,human,macaque,orangutan,pig,rabbit, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@1.88687,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000244279.1 ENST00000414621.1 chr7:30430524-30451991 3 227 21236 intergenic 0.99 0 0,1,1 0 0,0,0 0 0.652759465059333 0 0 2.68209644000753 0 0 3.46755509512149 0 1 1 chimp,human,macaque,marmoset,orangutan, processed_transcript processed_transcript A549@0,AG04450@0,BJ@0.085225,GM12878@0.161073,H1HESC@0.0614985,HELAS3@0.161201,HEPG2@0.0246955,HMEC@0,HSMM@0.034932,HUVEC@0,K562@0.064527,MCF7@0.0334325,NHEK@0.0245867,NHLF@0,SKNSHRA@0.0935155, 0 0 0 0 ENSG00000196295.4 ENST00000434399.1 chr7:30555925-30602441 5 1212 45296 intergenic -0.97 0 0,1,1 0 0,0,0 0 1.24986753797245 0 8.73267326732673 0.908314199929354 0 12.486798679868 11.7606190392088 0 0 0 chimp,human,macaque,marmoset,orangutan, processed_transcript processed_transcript A549@1.26066,AG04450@1.90046,BJ@3.75605,GM12878@7.32198,H1HESC@1.22169,HELAS3@1.95377,HEPG2@2.15692,HMEC@0.120806,HSMM@0.710128,HUVEC@1.56347,K562@1.98135,MCF7@0.827369,NHEK@2.50412,NHLF@0.630632,SKNSHRA@3.22779, 0 0 0 0 ENSG00000234133.2 ENST00000440438.2 chr7:30586782-30590397 2 351 3262 intergenic -0.97 0 0,0,0 0 0,0,0 0 0 0 0 2.53586756591048 0 0 2.54996934396076 0 0 0 chimp,cow,elephant,human,macaque,marmoset,orangutan, lincRNA lincRNA A549@0.0162615,AG04450@0,BJ@0.006295,GM12878@0.027,H1HESC@0,HELAS3@0.0095325,HEPG2@0.009237,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000196295.4 ENST00000426529.1 chr7:30587975-30603614 5 3591 12040 intergenic 4.14 0 0,1,1 0 0,0,0 0 1.40066445182724 7.59 2.30353661932609 0.529734219269103 15.584 2.31634642160958 0.534717607973422 15.62 0 1 chimp,human,macaque,orangutan, processed_transcript retained_intron A549@1.26066,AG04450@1.90046,BJ@3.75605,GM12878@7.32198,H1HESC@1.22169,HELAS3@1.95377,HEPG2@2.15692,HMEC@0.120806,HSMM@0.710128,HUVEC@1.56347,K562@1.98135,MCF7@0.827369,NHEK@2.50412,NHLF@0.630632,SKNSHRA@3.22779, 0 0 0 0 ENSG00000196295.4 ENST00000355837.2 chr7:30600539-30604233 2 2099 1593 intergenic 4.96 0 0,0,0 0 0,0,0 3.61600762267747 0 0 6.00666984278228 0 2.976 5.96093377798952 0 3.108 1 1 chimp,human,macaque,marmoset,orangutan, processed_transcript retained_intron A549@1.26066,AG04450@1.90046,BJ@3.75605,GM12878@7.32198,H1HESC@1.22169,HELAS3@1.95377,HEPG2@2.15692,HMEC@0.120806,HSMM@0.710128,HUVEC@1.56347,K562@1.98135,MCF7@0.827369,NHEK@2.50412,NHLF@0.630632,SKNSHRA@3.22779, 0 0 0 0 ENSG00000236455.1 ENST00000454922.1 chr7:30624316-30625588 2 750 520 intergenic 1.34 0 0,0,0 0 0,0,0 0 0 0 0 0 0 0 0 0 0 0 chimp,human,macaque,orangutan, antisense antisense A549@2.68146,AG04450@2.35507,BJ@6.38635,GM12878@2.69903,H1HESC@0.496336,HELAS3@2.38366,HEPG2@2.35789,HMEC@0.196019,HSMM@1.36596,HUVEC@1.5209,K562@2.42922,MCF7@1.13724,NHEK@1.86287,NHLF@0.289771,SKNSHRA@5.98241, 0 0 0 0 ENSG00000229263.1 ENST00000440376.1 chr7:30836307-30843026 2 545 6172 intronic 5.72 0 0,0,0 0 0,0,0 0 0 76.59 1.75412844036697 2.47197018794556 76.701 1.78348623853211 2.50064808813999 87.784 0 0 chimp,elephant,horse,human,macaque,marmoset,orangutan,rabbit, antisense antisense A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000231418.1 ENST00000433356.1 chr7:31454259-31460900 4 571 6064 intergenic -3.57 0 0,0,0 0 0,0,0 62.3800350262697 70.4863126649077 0 102.910683012259 83.8263522427441 4.478 93.7162872154116 80.7234498680739 4.713 0 0 chimp,cow,dog,elephant,human,macaque,marmoset,mouse,orangutan,rabbit,rat, lincRNA lincRNA A549@0.025369,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000237059.1 ENST00000434504.1 chr7:33055671-33056504 2 536 295 intronic 0 0 0,0,0 0 0,0,0 0 0 100.872 9.36380597014925 0 113.301 9.8339552238806 0 124.368 0 0 cat,chimp,human,macaque,orangutan, antisense antisense A549@0.0065535,AG04450@0,BJ@0.010111,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0.01855, 2 44 0 0 ENSG00000227481.1 ENST00000455149.1 chr7:33769904-33771676 2 575 1195 intergenic 8.05 0 0,0,1 0 0,0,0 0 0 0 0 0 0 0 0 0 0 0 cat,chimp,horse,human,macaque,marmoset,orangutan, antisense antisense A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0.0051505,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0.0121145,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0.007878, 0 0 0 0 ENSG00000236494.1 ENST00000420185.1 chr7:33832780-33842742 2 1587 8373 intergenic 4.56 0 0,0,0 0 0,0,0 0.525519848771267 11.1817747521796 185.056 1.35538752362949 8.42625104502568 189.18 4.61436672967864 13.3506509017079 181.897 0 0 chimp,human,macaque,marmoset,orangutan,pig, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0.002714,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0.0096595,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000236494.1 ENST00000440034.1 chr7:33835080-33842768 3 1002 6682 intergenic -1.78 0 0,0,0 0 0,0,0 0 1.21819814426818 185.056 0 1.66267584555522 189.18 0 3.76279557018857 181.897 0 0 chimp,human,macaque,orangutan, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0.002714,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0.0096595,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000233219.1 ENST00000440074.1 chr7:33908113-33913843 3 377 5349 intergenic -1.13 0 0,1,0 0 0,0,0 0 5.34698074406431 78.416 0 1.6399326977005 114.687 0 2.50383249205459 115.852 0 0 chimp,horse,human,macaque,orangutan, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0.0054105,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000236212.1 ENST00000446484.1 chr7:34249138-34295955 2 508 46307 intergenic -2.02 0 0,1,0 0 0,0,0 0 6.36974971386615 0 0 8.78826095406742 26.488 0 10.1554408620727 35.985 0 0 chimp,human,macaque,marmoset, lincRNA lincRNA A549@0.61105,AG04450@0,BJ@0,GM12878@0,H1HESC@0.422374,HELAS3@0.125457,HEPG2@0.010697,HMEC@0,HSMM@0,HUVEC@0,K562@0.014976,MCF7@0.171836,NHEK@0,NHLF@0,SKNSHRA@0.040608, 0 0 0 0 ENSG00000197085.6 ENST00000419766.1 chr7:34386124-34800803 5 4735 409936 intronic -0.14 0 0,0,0 0 0,0,0 0 3.00552037391202 9.234 0.777613516367476 3.57005483782834 9.559 0.804223864836325 7.67207808048085 12.86 0 0 chimp,dog,elephant,guinea_pig,horse,human,macaque,marmoset,orangutan, lincRNA processed_transcript A549@0.0256345,AG04450@0,BJ@0,GM12878@5.04157,H1HESC@0.004953,HELAS3@0.987605,HEPG2@3.78708,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0.0010205,NHEK@0.0414183,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000197085.6 ENST00000537560.1 chr7:34390034-34797884 5 944 406898 intronic -1.70 0 1,1,1 0 0,0,0 0 3.02796032420902 0 0 3.59670974052465 0 0 7.72935969210957 0 0 0 chimp,dog,elephant,horse,human,macaque,orangutan, lincRNA processed_transcript A549@0.0256345,AG04450@0,BJ@0,GM12878@5.04157,H1HESC@0.004953,HELAS3@0.987605,HEPG2@3.78708,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0.0010205,NHEK@0.0414183,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000197085.6 ENST00000539747.1 chr7:34390034-34911194 5 829 520323 intronic -1.70 0 0,0,1 0 0,0,0 0 4.2114917080352 0 0 5.20848972657368 0 0 8.50108874679766 0 0 0 chimp,dog,horse,human,macaque,orangutan, lincRNA processed_transcript A549@0.0256345,AG04450@0,BJ@0,GM12878@5.04157,H1HESC@0.004953,HELAS3@0.987605,HEPG2@3.78708,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0.0010205,NHEK@0.0414183,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000197085.6 ENST00000439852.1 chr7:34606335-34797884 6 704 190835 intronic -3.23 0 0,1,0 0 0,0,0 0 3.81874394110095 0 0 4.84702491681295 0 0 12.5888856865879 0 0 0 chimp,horse,human,macaque,marmoset,orangutan, lincRNA processed_transcript A549@0.0256345,AG04450@0,BJ@0,GM12878@5.04157,H1HESC@0.004953,HELAS3@0.987605,HEPG2@3.78708,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0.0010205,NHEK@0.0414183,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000197085.6 ENST00000358772.4 chr7:34607864-34797884 4 546 189468 intronic -4.19 0 0,1,0 0 0,0,0 0 3.84629594443389 0 3.06410256410256 4.87316591719974 0 3.21794871794872 12.6704403909895 0 0 0 chimp,human, lincRNA processed_transcript A549@0.0256345,AG04450@0,BJ@0,GM12878@5.04157,H1HESC@0.004953,HELAS3@0.987605,HEPG2@3.78708,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0.0010205,NHEK@0.0414183,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000197085.6 ENST00000544556.1 chr7:34656519-34797884 3 373 140988 intronic -4.19 0 0,1,0 0 0,0,0 0 4.11947116066616 0 0 4.83343263256447 0 0 14.8289783527676 0 0 1 chimp,human,macaque,orangutan, lincRNA processed_transcript A549@0.0256345,AG04450@0,BJ@0,GM12878@5.04157,H1HESC@0.004953,HELAS3@0.987605,HEPG2@3.78708,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0.0010205,NHEK@0.0414183,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000197085.6 ENST00000535640.1 chr7:34656519-34911194 4 337 254332 intronic -1.90 0 0,0,0 0 0,0,0 0 6.05531745906925 0 0 7.58087460484721 0 0 13.2463040435336 0 0 0 NA lincRNA processed_transcript A549@0.0256345,AG04450@0,BJ@0,GM12878@5.04157,H1HESC@0.004953,HELAS3@0.987605,HEPG2@3.78708,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0.0010205,NHEK@0.0414183,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000197085.6 ENST00000431669.1 chr7:34682839-34911194 4 365 227984 intronic 0.10 0 0,0,1 0 0,0,0 0 6.75512755281072 0 0 8.35230981121482 0 0 14.650585128781 0 0 0 chimp,horse,human,macaque,marmoset,orangutan, lincRNA processed_transcript A549@0.0256345,AG04450@0,BJ@0,GM12878@5.04157,H1HESC@0.004953,HELAS3@0.987605,HEPG2@3.78708,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0.0010205,NHEK@0.0414183,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000197085.6 ENST00000428922.1 chr7:34743462-34800803 3 507 56830 intronic -4.42 0 0,0,0 0 0,0,0 67.5660749506903 5.46684849551293 9.234 77.6942800788955 5.04147457328875 9.559 78.8067061143984 28.130899172972 12.86 0 0 cat,chimp,cow,elephant,guinea_pig,horse,human,macaque,marmoset,orangutan,panda,rabbit, lincRNA retained_intron A549@0.0256345,AG04450@0,BJ@0,GM12878@5.04157,H1HESC@0.004953,HELAS3@0.987605,HEPG2@3.78708,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0.0010205,NHEK@0.0414183,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000197085.6 ENST00000436945.2 chr7:34758474-34873940 5 1398 114060 intronic -2.82 0 0,0,0 0 0,0,0 64.5243204577968 5.72380326144135 21.51 19.3283261802575 6.45670699631773 33.64 25.0586552217454 13.5341223917237 35.499 0 0 cat,chimp,dog,horse,human,macaque,marmoset,orangutan,panda, lincRNA processed_transcript A549@0.0256345,AG04450@0,BJ@0,GM12878@5.04157,H1HESC@0.004953,HELAS3@0.987605,HEPG2@3.78708,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0.0010205,NHEK@0.0414183,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000197085.6 ENST00000442669.2 chr7:34758474-34873941 6 1551 113906 intronic 0.42 0 0,0,0 0 0,0,0 58.1592520954223 5.7315417976226 21.51 17.42166344294 6.46543641248046 33.64 21.1766602192134 13.5737537969905 35.499 0 0 cat,chimp,dog,elephant,horse,human,macaque,marmoset,orangutan,panda, lincRNA processed_transcript A549@0.0256345,AG04450@0,BJ@0,GM12878@5.04157,H1HESC@0.004953,HELAS3@0.987605,HEPG2@3.78708,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0.0010205,NHEK@0.0414183,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000226063.1 ENST00000442323.1 chr7:35297992-35299340 2 578 768 intergenic 3.34 0 0,1,0 0 0,0,0 0 0 0 0 0 0 0 0 0 0 0 chimp,cow,dog,human,macaque,marmoset,orangutan,pig, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000235464.1 ENST00000441150.1 chr7:35535631-35549873 2 560 13680 intergenic 0.46 0 0,0,1 0 0,0,0 140.946428571429 5.6562865497076 0 156.875 8.97828947368421 0 171.401785714286 10.8519005847953 0 0 0 cat,chimp,cow,elephant,horse,human,macaque,marmoset,mouse,orangutan,panda,rat, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000227544.1 ENST00000432866.1 chr7:35756055-35758729 3 569 2101 intergenic 1.38 0 0,0,0 0 0,0,0 389.546572934974 6.49595430747263 9.956 303.93848857645 6.11565920990005 8.973 317.001757469244 10.8986197049024 12.683 0 0 cat,chimp,cow,dog,elephant,guinea_pig,horse,human,macaque,marmoset,mouse,orangutan,panda,pig,rabbit,rat, lincRNA lincRNA A549@0.0085755,AG04450@0.017483,BJ@0.009784,GM12878@0,H1HESC@0,HELAS3@0.018271,HEPG2@0.007061,HMEC@0,HSMM@1.47302,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0.205368,SKNSHRA@0.426538, 0 0 0 0 ENSG00000227544.1 ENST00000449644.1 chr7:35756084-35774497 5 1646 16759 intergenic 1.38 0 0,0,0 0 0,0,0 154.948967193196 9.11904051554389 25.152 106.696233292831 7.074944805776 20.098 111.085054678007 8.4951966107763 26.233 0 0 cat,chimp,cow,human,macaque,marmoset,orangutan,pig, lincRNA lincRNA A549@0.0085755,AG04450@0.017483,BJ@0.009784,GM12878@0,H1HESC@0,HELAS3@0.018271,HEPG2@0.007061,HMEC@0,HSMM@1.47302,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0.205368,SKNSHRA@0.426538, 0 0 0 0 ENSG00000227544.1 ENST00000430518.1 chr7:35756202-35759144 2 740 2200 intergenic 1.38 0 0,0,0 0 0,0,0 195.437837837838 6.20363636363636 86.984 155.122972972973 5.84045454545455 66.847 152.543243243243 10.4081818181818 79.891 0 0 cat,chimp,dog,elephant,guinea_pig,horse,human,macaque,marmoset,orangutan,panda,pig,rabbit, lincRNA lincRNA A549@0.0085755,AG04450@0.017483,BJ@0.009784,GM12878@0,H1HESC@0,HELAS3@0.018271,HEPG2@0.007061,HMEC@0,HSMM@1.47302,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0.205368,SKNSHRA@0.426538, 0 0 0 0 ENSG00000227544.1 ENST00000458087.1 chr7:35756286-35759309 2 1081 1940 intergenic -1.43 0 0,0,0 0 0,0,0 99.3709528214616 3.79381443298969 131 78.6651248843663 4.67835051546392 100.483 77.3894542090657 9.85824742268041 113.015 0 0 chimp,cow,dog,elephant,horse,human,macaque,marmoset,orangutan,panda,pig,rabbit, lincRNA lincRNA A549@0.0085755,AG04450@0.017483,BJ@0.009784,GM12878@0,H1HESC@0,HELAS3@0.018271,HEPG2@0.007061,HMEC@0,HSMM@1.47302,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0.205368,SKNSHRA@0.426538, 0 0 0 0 ENSG00000228878.2 ENST00000437235.2 chr7:35794574-35840216 5 697 44937 intergenic -3.77 0 1,1,1 1 0,0,0 29.2219020172911 15.330173564753 181.971 18.521613832853 19.9947263017356 223.279 20.6311239193084 25.5113484646195 204.427 0 0 chimp,cow,dog,elephant,guinea_pig,horse,human,macaque,mouse,orangutan,panda,pig,rabbit, processed_transcript processed_transcript A549@0.0344585,AG04450@0.0199495,BJ@0.101299,GM12878@0.687668,H1HESC@0.077336,HELAS3@0.070717,HEPG2@0.0493685,HMEC@0.015422,HSMM@0.0571335,HUVEC@0.0147625,K562@0.130536,MCF7@0.026039,NHEK@0.0901543,NHLF@0.0279945,SKNSHRA@0.198013, 0 0 0 0 ENSG00000228878.2 ENST00000412856.1 chr7:35794756-35840198 6 581 44851 intergenic 0 0 1,1,1 1 0,0,0 19.9311531841652 15.3605939666897 181.971 19.9552495697074 20.0344028003835 223.279 22.4647160068847 25.5619718623888 204.427 0 0 cat,chimp,cow,elephant,guinea_pig,horse,human,macaque,orangutan,panda,pig,rabbit, processed_transcript processed_transcript A549@0.0344585,AG04450@0.0199495,BJ@0.101299,GM12878@0.687668,H1HESC@0.077336,HELAS3@0.070717,HEPG2@0.0493685,HMEC@0.015422,HSMM@0.0571335,HUVEC@0.0147625,K562@0.130536,MCF7@0.026039,NHEK@0.0901543,NHLF@0.0279945,SKNSHRA@0.198013, 0 0 0 0 ENSG00000228878.2 ENST00000424194.1 chr7:35803374-35840226 4 527 36319 intergenic 1.97 0 0,1,0 1 0,0,0 21.9734345351044 12.1562818359536 181.971 23.3282732447818 17.3810126930808 222.229 26.1138519924099 23.6381232963463 203.362 0 0 chimp,cow,dog,elephant,guinea_pig,horse,human,macaque,marmoset,orangutan,panda,pig,rabbit,rat, processed_transcript processed_transcript A549@0.0344585,AG04450@0.0199495,BJ@0.101299,GM12878@0.687668,H1HESC@0.077336,HELAS3@0.070717,HEPG2@0.0493685,HMEC@0.015422,HSMM@0.0571335,HUVEC@0.0147625,K562@0.130536,MCF7@0.026039,NHEK@0.0901543,NHLF@0.0279945,SKNSHRA@0.198013, 0 0 0 0 ENSG00000232930.1 ENST00000446024.1 chr7:36069221-36095041 4 478 25336 intergenic -5.32 0 0,0,1 0 0,0,0 0 9.84129302178718 22.79 0 9.49407957057152 0 0 9.95232080833597 0 0 0 chimp,horse,human,macaque,marmoset,orangutan, lincRNA lincRNA A549@0.013994,AG04450@0.01338,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0.0083425,NHEK@0.00478333,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000229679.1 ENST00000440788.1 chr7:36268889-36270716 2 455 1370 intronic 0.59 0 0,0,0 0 0,0,0 0 0 0 0 0 3.419 0 0 3.614 0 0 cat,chimp,cow,dog,horse,human,macaque,marmoset,panda,rabbit, antisense antisense A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000237400.1 ENST00000435254.1 chr7:36502632-36544121 4 527 40956 intergenic -0.37 0 0,0,0 0 0,0,0 0 1.64566852231663 0 12.4762808349146 5.33076960640688 0 12.9032258064516 6.09837386463522 0 0 0 chimp,human,macaque,orangutan, antisense antisense A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0.004998,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000230539.1 ENST00000449672.1 chr7:36637440-36639726 3 570 1712 intronic -0.46 0 0,0,0 0 0,0,0 0 55.4088785046729 0 5.8859649122807 71.6647196261682 0 5.96315789473684 74.3773364485981 0 0 0 chimp,cow,dog,horse,human,macaque,marmoset,orangutan,rabbit, sense_intronic sense_intronic A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000229424.1 ENST00000419326.1 chr7:36790292-36802686 3 584 11806 intergenic 3.44 0 0,0,0 0 0,0,0 0 7.85058444858547 0 0 3.54836523801457 0 0 4.21590716584787 0 0 0 chimp,horse,human,macaque,marmoset,orangutan,rabbit, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000235728.1 ENST00000415356.1 chr7:36820613-36822394 2 870 909 intergenic -0.00 0 0,0,1 0 0,0,0 0 0 0 0 0 16.02 0 0 16.47 0 0 chimp,human,macaque,marmoset,orangutan,rabbit, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000230831.1 ENST00000439998.1 chr7:36878577-36880978 2 551 1848 intergenic 4.64 0 0,0,0 0 0,0,0 41.5862068965517 28.4967532467532 0 11.5117967332123 35.7359307359307 4.308 16.7531760435572 35.758658008658 6.442 0 0 cat,chimp,elephant,horse,human,macaque,marmoset,orangutan,panda,pig,rabbit,rat, antisense antisense A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0.014809,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0.0266523,NHLF@0,SKNSHRA@0.025399, 0 0 0 0 ENSG00000224101.1 ENST00000419535.1 chr7:37037401-37053235 3 525 15305 exonic 1.91 0 0,1,0 0 0,0,0 81.8495238095238 43.00640313623 0 108.857142857143 32.5257105521072 0 102.95619047619 33.4625285854296 1.41 0 0 cat,chimp,cow,dog,horse,human,macaque,marmoset,opossum,orangutan,panda,pig, antisense antisense A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000250924.1 ENST00000515771.1 chr7:38381216-38418238 4 3474 33542 intergenic 6.97 0 0,0,1 0 0,1,0 0 0 0 0 0.972064873889452 6.395 31.1908462867012 3.15368791366048 10.638 0 1 chimp,human,macaque,orangutan, lincRNA lincRNA A549@0.194676,AG04450@0.010139,BJ@0.0091175,GM12878@2.92755,H1HESC@0.444532,HELAS3@0.0143905,HEPG2@0.007557,HMEC@0.002355,HSMM@0.021501,HUVEC@0.189213,K562@8.2256,MCF7@0.0035205,NHEK@0.000734,NHLF@0.011133,SKNSHRA@0.0854935, 0 0 0 0 ENSG00000233854.1 ENST00000420243.1 chr7:39023843-39053151 5 509 28791 intronic -4.51 0 0,0,1 0 0,0,0 236.744597249509 22.642839776319 166.749 175.575638506876 15.6267236289118 100.868 213.691552062868 18.4634087041089 96.389 0 0 cat,chimp,cow,dog,elephant,guinea_pig,horse,human,macaque,marmoset,mouse,orangutan,panda,rabbit, lincRNA processed_transcript A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0.0581185,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0.0714285,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000224122.1 ENST00000433519.1 chr7:39444197-39445945 4 377 1365 intronic -1.85 0 0,1,1 0 0,0,0 82.551724137931 209.815384615385 307.857 53.8992042440318 234.637362637363 263.605 46.9761273209549 199.607326007326 253.167 0 0 cat,chimp,cow,elephant,horse,human,macaque,marmoset,orangutan,panda, antisense antisense A549@0,AG04450@0,BJ@0,GM12878@0.452559,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000227172.1 ENST00000439751.1 chr7:39585249-39605838 3 407 20178 intergenic 0.11 0 0,1,0 0 0,0,0 0 10.9815640796908 11.904 0 14.0147190008921 35.496 0 12.5457924472197 40.017 0 0 chimp,elephant,guinea_pig,human,macaque,marmoset,mouse,orangutan, antisense antisense A549@0.005294,AG04450@0.0072205,BJ@0.006005,GM12878@0.044433,H1HESC@0,HELAS3@0.0323655,HEPG2@0,HMEC@0,HSMM@0.010037,HUVEC@0,K562@0.0190505,MCF7@0,NHEK@0.033261,NHLF@0,SKNSHRA@0.027129, 0 0 0 0 ENSG00000231951.1 ENST00000420748.1 chr7:39649209-39649889 2 563 115 exonic 0 0 1,1,1 0 0,0,0 0 0 0 0 0 0 0 0 0 0 0 chimp,dog,elephant,horse,human,macaque,marmoset,mouse,orangutan,panda,pig,rabbit, antisense antisense A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0.0322385,K562@0.009648,MCF7@0,NHEK@0.057129,NHLF@0,SKNSHRA@0.009521, 0 0 0 0 ENSG00000228554.1 ENST00000435766.1 chr7:39739940-39742895 2 729 2224 intronic 2.98 0 0,1,0 0 0,0,0 2.29355281207133 2.25539568345324 0 0 0 0 0 0 0 0 0 chimp,human,macaque,marmoset,orangutan, antisense antisense A549@0.0046135,AG04450@0.00405,BJ@0,GM12878@0.006413,H1HESC@0.0163785,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0.0095625,K562@0.204651,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000188185.6 ENST00000340510.4 chr7:39773231-39832691 12 3037 56401 intergenic 3.19 0 0,1,1 1 0,0,0 0 0.745749188844169 6.688 0 0.92597648977855 3.825 129.410602568324 6.4377050052304 3.975 0 0 chimp,human,macaque,marmoset,orangutan, lincRNA processed_transcript A549@0.689396,AG04450@0.838644,BJ@0.712532,GM12878@1.44644,H1HESC@2.5975,HELAS3@0.599683,HEPG2@0.530752,HMEC@1.13415,HSMM@0.861171,HUVEC@0.470598,K562@0.30553,MCF7@2.29828,NHEK@0.591553,NHLF@0.795988,SKNSHRA@4.07652, 0 0 0 0 ENSG00000188185.6 ENST00000448955.1 chr7:39821288-39829024 4 464 7266 intergenic 3.89 0 0,0,0 0 0,0,0 0 0 0 0 0 0 0 39.6633636113405 0 1 1 chimp,human,macaque,marmoset,orangutan, lincRNA retained_intron A549@0.689396,AG04450@0.838644,BJ@0.712532,GM12878@1.44644,H1HESC@2.5975,HELAS3@0.599683,HEPG2@0.530752,HMEC@1.13415,HSMM@0.861171,HUVEC@0.470598,K562@0.30553,MCF7@2.29828,NHEK@0.591553,NHLF@0.795988,SKNSHRA@4.07652, 0 0 0 0 ENSG00000188185.6 ENST00000512765.2 chr7:39831500-39834216 3 2176 536 intergenic 11.95 0 0,0,1 0 0,0,0 0 0 0 0 0 0 342.317555147059 436.014925373134 60.06 0 0 cat,chimp,dog,elephant,guinea_pig,human,macaque,marmoset,orangutan,panda,platypus,rabbit, lincRNA retained_intron A549@0.689396,AG04450@0.838644,BJ@0.712532,GM12878@1.44644,H1HESC@2.5975,HELAS3@0.599683,HEPG2@0.530752,HMEC@1.13415,HSMM@0.861171,HUVEC@0.470598,K562@0.30553,MCF7@2.29828,NHEK@0.591553,NHLF@0.795988,SKNSHRA@4.07652, 0 0 0 0 ENSG00000249078.1 ENST00000507268.1 chr7:39893117-39894854 2 1549 186 intergenic -3.83 0 0,0,1 0 0,0,0 178.954163976759 220.161290322581 39.354 89.5138799225307 112.672043010753 25.227 143.734021949645 422.494623655914 28.316 0 0 chimp,cow,dog,elephant,human,opossum,orangutan,panda,pig, lincRNA lincRNA A549@0.0217435,AG04450@0.0056845,BJ@0.0003175,GM12878@0.0042545,H1HESC@0.002315,HELAS3@0,HEPG2@0.0017945,HMEC@0,HSMM@0,HUVEC@0,K562@0.008959,MCF7@0.0015625,NHEK@0.001141,NHLF@0.00021,SKNSHRA@0.002317, 0 0 0 0 ENSG00000203446.2 ENST00000415237.1 chr7:40577726-40586527 2 1769 7030 intronic 3.15 0 0,0,0 0 0,0,0 2.71735443753533 67.0442389758179 0 2.97795364612776 120.473399715505 0 3.07857546636518 113.225320056899 0 0 0 chimp,human,macaque,marmoset,orangutan, antisense antisense A549@0.0035055,AG04450@0.0036415,BJ@0.002733,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0.0057655,HMEC@0,HSMM@0.0104565,HUVEC@0,K562@0,MCF7@0.006863,NHEK@0.0172367,NHLF@0.006537,SKNSHRA@0.204357, 0 0 0 0 ENSG00000227658.1 ENST00000432405.1 chr7:40815157-40824816 4 377 9276 intronic 0 0 0,0,0 0 0,0,0 0 58.9372574385511 0 11.1193633952255 58.2630444156964 3.396 19.2944297082228 48.2193833548943 13.803 0 0 cat,chimp,cow,elephant,horse,human,macaque,marmoset,orangutan,pig, sense_intronic sense_intronic A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000232458.1 ENST00000443406.1 chr7:41004266-41019537 3 3260 12007 intergenic -4.10 0 0,0,0 0 0,0,0 3.88711656441718 38.5660864495711 0 11.6046012269939 20.6704422420255 0 11.9242331288344 20.6726909302907 0 0 0 chimp,human,macaque,marmoset,orangutan, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0.0047995, 0 0 0 0 ENSG00000224017.1 ENST00000440213.1 chr7:41141202-41173105 6 1214 30679 intergenic 2.17 0 0,0,0 0 0,0,0 210.757001647446 62.7646598650543 0 106.005766062603 66.1303497506438 0 98.8006589785832 62.9202711952802 0 0 0 chimp,human,marmoset, lincRNA lincRNA A549@0,AG04450@0.014039,BJ@0.003967,GM12878@0,H1HESC@0,HELAS3@0.0087015,HEPG2@0.0106975,HMEC@0.020138,HSMM@0.0103015,HUVEC@0,K562@0,MCF7@0,NHEK@0.0139557,NHLF@0.0063975,SKNSHRA@0.133409, 0 0 0 0 ENSG00000236310.1 ENST00000416150.1 chr7:41706766-41744933 3 383 37780 encompassing -7.88 0 0,1,1 0 0,0,0 77.8981723237598 134.948861831657 418.276 70.4412532637076 113.713128639492 348.141 51.0417754569191 108.539782953944 261.635 0 0 cat,chimp,cow,dog,horse,human,macaque,marmoset,orangutan,panda,pig, processed_transcript processed_transcript A549@0,AG04450@0.04223,BJ@0.015352,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0.0118705,K562@0,MCF7@0,NHEK@0.0240287,NHLF@0,SKNSHRA@0.0221115, 0 0 0 0 ENSG00000224116.2 ENST00000415848.2 chr7:41733514-41818986 4 3001 82465 intronic 3.16 1 0,1,1 0 0,0,0 32.7973377703827 48.1847297510338 214.275 31.8692179700499 36.0871320988103 189.523 30.4672212978369 47.0027043087035 173.611 0 0 chimp,cow,horse,human,macaque,marmoset,orangutan,rabbit, antisense antisense A549@0,AG04450@0.013251,BJ@0.0606685,GM12878@0.0012615,H1HESC@0.0022295,HELAS3@0.0009775,HEPG2@0,HMEC@0.004408,HSMM@0.0330835,HUVEC@0.004678,K562@0,MCF7@0.0168045,NHEK@0.00323433,NHLF@0.058034,SKNSHRA@0.0846915, 0 0 0 0 ENSG00000224116.2 ENST00000422822.1 chr7:41733535-41752355 2 2310 16508 intronic 1.14 0 0,1,0 0 0,0,0 44.9051948051948 199.105948630967 226.308 37.3463203463203 154.228798158469 203.068 39.0536796536797 139.32463048219 186.568 0 0 chimp,horse,human,macaque,marmoset,orangutan, antisense antisense A549@0,AG04450@0.013251,BJ@0.0606685,GM12878@0.0012615,H1HESC@0.0022295,HELAS3@0.0009775,HEPG2@0,HMEC@0.004408,HSMM@0.0330835,HUVEC@0.004678,K562@0,MCF7@0.0168045,NHEK@0.00323433,NHLF@0.058034,SKNSHRA@0.0846915, 0 0 0 0 ENSG00000224116.2 ENST00000420821.1 chr7:41733546-41752792 3 1855 17387 intronic 0.52 1 0,1,0 0 0,0,0 46.0619946091644 190.029849887847 232.611 40.8199460916442 146.630413527348 210.163 37.7105121293801 133.056018864669 193.355 0 0 chimp,human,macaque,marmoset,orangutan, antisense antisense A549@0,AG04450@0.013251,BJ@0.0606685,GM12878@0.0012615,H1HESC@0.0022295,HELAS3@0.0009775,HEPG2@0,HMEC@0.004408,HSMM@0.0330835,HUVEC@0.004678,K562@0,MCF7@0.0168045,NHEK@0.00323433,NHLF@0.058034,SKNSHRA@0.0846915, 0 0 0 0 ENSG00000238284.1 ENST00000455947.1 chr7:42701325-42746046 3 1168 43549 intergenic -1.75 1 0,0,0 0 0,0,0 0 20.1459275758341 0 0 20.4342235183357 0 0 20.5920227789387 0 0 0 NA lincRNA processed_transcript A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0.054032,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000231539.1 ENST00000433315.1 chr7:42869271-42884037 2 559 14205 intergenic 2.36 0 0,0,0 0 0,0,0 0 5.44019711369236 0 0 6.26448433650123 0 0 8.2744104188666 0 0 0 chimp,horse,human,macaque,marmoset,orangutan,panda, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0.0639075,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000232006.1 ENST00000456114.1 chr7:43011866-43084204 2 634 71702 intergenic -5.84 0 0,0,0 0 0,0,0 0 4.95795096371091 9.405 6.09463722397476 4.48133943265181 14.904 6.27129337539432 6.80400825639452 16.902 0 0 chimp,human,orangutan, lincRNA lincRNA A549@0.164794,AG04450@0,BJ@0.011613,GM12878@0.125926,H1HESC@0.014305,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0.58047,MCF7@0.0920315,NHEK@0.10942,NHLF@0,SKNSHRA@0.0071345, 0 0 0 0 ENSG00000181211.1 ENST00000322220.1 chr7:43157495-43202786 7 1832 43447 intronic -1.88 0 0,0,0 0 0,0,0 54.5316593886463 3.86289041821069 0 54.0016375545852 4.37081961930628 5.491 38.7696506550218 5.16311828204479 6.909 0 0 chimp,dog,elephant,horse,human,macaque,marmoset,orangutan,rabbit, sense_intronic sense_intronic A549@0,AG04450@0.0021375,BJ@0.001032,GM12878@0.0026585,H1HESC@0.005272,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0.002964,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000228680.1 ENST00000457315.1 chr7:43278665-43288867 3 352 9846 intronic 0.92 0 0,0,1 0 0,0,0 63.5369318181818 14.2070891732683 196.794 35.1732954545455 16.6094860857201 88.687 41.3977272727273 19.0238675604306 93.759 0 0 chimp,horse,human,macaque,marmoset,orangutan, antisense antisense A549@0.01935,AG04450@0,BJ@0.0050625,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000228680.1 ENST00000458680.1 chr7:43280669-43288846 2 476 7699 intronic 8.38 0 0,0,0 0 0,0,0 41.0294117647059 17.5689050526042 204.249 15.296218487395 21.2413300428627 94.087 19.577731092437 24.329003766723 99.321 0 0 chimp,dog,elephant,horse,human,macaque,marmoset,orangutan,panda, antisense antisense A549@0.01935,AG04450@0,BJ@0.0050625,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000228680.1 ENST00000458590.1 chr7:43284962-43288841 2 495 3382 intronic -3.14 0 0,0,0 0 0,0,0 26.5353535353535 0 206.024 14.7090909090909 1.98107628622117 94.087 18.8262626262626 1.98698994677706 99.321 0 0 cat,chimp,cow,dog,elephant,guinea_pig,horse,human,macaque,marmoset,orangutan,panda,pig,rabbit, antisense antisense A549@0.01935,AG04450@0,BJ@0.0050625,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000231638.1 ENST00000436105.1 chr7:43548327-43562141 3 2913 10897 exonic 6.39 1 0,0,1 0 0,0,0 30.8383110195675 13.3605579517298 0 34.615859938208 6.74479214462696 6.9 36.1150017164435 6.60521244379187 7.825 0 0 cat,chimp,elephant,human,macaque,marmoset,orangutan,rabbit, antisense antisense A549@0.0033835,AG04450@0.004768,BJ@0.0107815,GM12878@0.020707,H1HESC@0.0108065,HELAS3@0.006412,HEPG2@0.018229,HMEC@0.193779,HSMM@0.108995,HUVEC@0,K562@0.0016845,MCF7@0,NHEK@1.26396,NHLF@0.044589,SKNSHRA@0.014387, 0 0 0 0 ENSG00000228434.1 ENST00000447643.1 chr7:44043645-44047465 3 1863 1953 exonic 1.28 0 0,0,1 0 0,0,0 0 0 0 0 0 0 0 0 0 0 0 chimp,human,macaque,marmoset,orangutan, processed_transcript processed_transcript A549@0.0511735,AG04450@0.027058,BJ@0.0926985,GM12878@0.0913155,H1HESC@0.05055,HELAS3@0.093524,HEPG2@0.109675,HMEC@0.01825,HSMM@0.0178595,HUVEC@0.0547385,K562@0.145206,MCF7@0.207948,NHEK@0.0614807,NHLF@0.010507,SKNSHRA@0.188181, 0 0 0 0 ENSG00000250121.1 ENST00000510452.1 chr7:44059560-44065967 2 918 5487 intergenic 4.39 0 0,0,0 0 0,0,0 0 0 0 0 0 17.051 0 0.708583925642428 66.701 0 1 chimp,human,orangutan, lincRNA lincRNA A549@0.0073315,AG04450@0,BJ@0,GM12878@0.0162205,H1HESC@0.0031635,HELAS3@0,HEPG2@0.00593,HMEC@0,HSMM@0,HUVEC@0,K562@0.011746,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0.050487, 0 0 0 0 ENSG00000235314.1 ENST00000416824.1 chr7:44078770-44080702 2 1321 609 intergenic 6.74 0 0,1,1 0 0,0,0 0 86.3940886699507 50.086 156.921271763815 119.714285714286 93.2 235.911430734292 232.528735632184 112.32 0 0 cat,chimp,cow,dog,guinea_pig,horse,human,marmoset,opossum,orangutan,panda,pig,rabbit, lincRNA processed_transcript A549@0.0463195,AG04450@0.0743515,BJ@0.225976,GM12878@0.229089,H1HESC@0.133329,HELAS3@0.180374,HEPG2@0.380209,HMEC@0.101968,HSMM@0.0659475,HUVEC@0.1505,K562@0.107598,MCF7@0.161061,NHEK@0.0297733,NHLF@0.111676,SKNSHRA@0.585484, 0 0 0 0 ENSG00000235314.1 ENST00000441052.1 chr7:44079122-44081905 2 2588 193 intergenic 10.93 0 0,1,0 0 0,0,0 20.3299845440495 0 50.086 120.033616692427 0 93.2 178.973338485317 170.704663212435 118.1 0 0 chimp,human,orangutan, lincRNA processed_transcript A549@0.0463195,AG04450@0.0743515,BJ@0.225976,GM12878@0.229089,H1HESC@0.133329,HELAS3@0.180374,HEPG2@0.380209,HMEC@0.101968,HSMM@0.0659475,HUVEC@0.1505,K562@0.107598,MCF7@0.161061,NHEK@0.0297733,NHLF@0.111676,SKNSHRA@0.585484, 0 0 0 0 ENSG00000228596.1 ENST00000425077.1 chr7:44824649-44826939 2 420 1868 intergenic 4.03 0 0,0,0 0 0,0,0 0 0 0 0 0 0 0 0 0 0 0 chimp,human,macaque,marmoset,orangutan, antisense antisense A549@0.0270365,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0.028074,HEPG2@0,HMEC@0.009703,HSMM@0,HUVEC@0,K562@0.0128035,MCF7@0.024145,NHEK@0,NHLF@0,SKNSHRA@0.026358, 0 0 0 0 ENSG00000234183.1 ENST00000443162.1 chr7:44888015-44889167 2 186 964 intergenic 0 1 1,1,1 0 0,0,0 0 0 74.821 18.9784946236559 0 52.052 19.5161290322581 0 62.972 0 0 chimp,human,macaque,marmoset,orangutan, antisense antisense A549@0.014692,AG04450@0,BJ@0,GM12878@0.0104075,H1HESC@0,HELAS3@0,HEPG2@0.0154855,HMEC@0,HSMM@0,HUVEC@0,K562@0.0271805,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000234183.1 ENST00000450016.1 chr7:44888658-44889164 2 279 225 intergenic -1.94 1 0,0,1 0 0,0,0 0 0 27.399 0 0 43.032 0 0 47.168 0 0 chimp,human,macaque,marmoset,orangutan, antisense antisense A549@0.014692,AG04450@0,BJ@0,GM12878@0.0104075,H1HESC@0,HELAS3@0,HEPG2@0.0154855,HMEC@0,HSMM@0,HUVEC@0,K562@0.0271805,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000225537.1 ENST00000443714.1 chr7:45500311-45581781 3 539 80927 intergenic -0.54 0 0,0,1 0 0,0,0 0 7.05640886230801 73.44 0 2.30097495273518 34.006 0 4.12055309105737 33.91 0 0 elephant,human,macaque,marmoset,orangutan, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0.048811,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000237471.1 ENST00000416708.1 chr7:46009256-46019790 3 552 9978 intergenic 3.01 0 0,0,0 0 0,0,0 0 3.56885147324113 0 51.0905797101449 0.526959310483063 0 53.6557971014493 0.55341751854079 0 0 0 chimp,human,macaque,marmoset,orangutan, lincRNA lincRNA A549@0.0398825,AG04450@0.016154,BJ@0.0475515,GM12878@0.018501,H1HESC@0,HELAS3@0.148554,HEPG2@0.023359,HMEC@0,HSMM@0.011122,HUVEC@0,K562@0.021643,MCF7@0.0037045,NHEK@0.00237867,NHLF@0.0070315,SKNSHRA@0, 0 0 0 0 ENSG00000229628.1 ENST00000436056.1 chr7:46030504-46040497 2 530 9461 intergenic 8.20 0 0,1,0 0 0,0,0 0 0 0 25.3075471698113 11.5574463587359 0 235.662264150943 74.1967022513476 0 0 0 chimp,cow,human,macaque,marmoset,orangutan, lincRNA lincRNA A549@0.0174325,AG04450@0,BJ@0,GM12878@0.004406,H1HESC@0,HELAS3@0.0304605,HEPG2@0.0347925,HMEC@0,HSMM@0.00857,HUVEC@0,K562@0.0092335,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000229459.1 ENST00000414915.1 chr7:46300662-46334067 4 520 32879 intergenic 0.07 0 0,0,0 0 0,0,0 0 4.45706986222209 0 0 1.89899327838438 0 0 3.3160375923842 0 0 0 chimp,human,macaque,marmoset,orangutan, lincRNA lincRNA A549@0,AG04450@0.0123075,BJ@0,GM12878@0.005581,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0.016554,HUVEC@0,K562@0,MCF7@0,NHEK@0.032508,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000237760.1 ENST00000436266.1 chr7:46341718-46383219 2 237 41262 intergenic 0 0 0,0,0 0 0,0,0 0 1.39106199408657 0 0 0.709660220057196 0 0 1.30274829140614 0 0 0 chimp,horse,human,macaque,marmoset,orangutan, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000240355.1 ENST00000436501.1 chr7:46516055-46517538 2 227 1254 intergenic 0 0 0,0,0 0 0,0,0 0 0 0 0 2.66826156299841 0 0 3.39393939393939 0 0 0 chimp,human,macaque,orangutan, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000230680.2 ENST00000440935.1 chr7:46517420-46521176 3 537 3215 intergenic -4.89 0 0,0,1 0 0,0,0 0 0 0 0 0 0 0 0 0 0 0 chimp,human,macaque,orangutan, lincRNA lincRNA A549@0,AG04450@0,BJ@0.005993,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000232072.1 ENST00000424359.1 chr7:46930223-46940530 2 358 9947 intergenic 0 0 0,0,0 0 0,0,0 0 0 10.994 3.46368715083799 0.44948225595657 27.081 29.4664804469274 1.60490600180959 31.17 0 0 chimp,guinea_pig,horse,human,marmoset,orangutan, processed_transcript processed_transcript A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000232072.1 ENST00000433337.1 chr7:46930225-47089276 3 452 158595 intergenic 0 0 0,0,0 0 0,0,0 0 3.71161764242252 0 0 3.38540937608373 0 0 4.27395567325578 0 0 0 chimp,horse,human,macaque,orangutan, processed_transcript processed_transcript A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000223829.1 ENST00000445615.1 chr7:47009300-47023027 4 827 12894 intergenic -2.27 0 0,0,0 0 0,0,0 0 0 0 3.18016928657799 0.555762370094618 0 4.37122128174123 0.822475570032573 0 0 0 chimp,cow,horse,human,marmoset,orangutan, lincRNA lincRNA A549@0,AG04450@0,BJ@0.0034275,GM12878@0,H1HESC@0,HELAS3@0.03403,HEPG2@0,HMEC@0,HSMM@0.0029145,HUVEC@0,K562@0,MCF7@0,NHEK@0.0248037,NHLF@0.0027635,SKNSHRA@0, 0 0 0 0 ENSG00000223829.1 ENST00000423781.1 chr7:47009314-47067079 4 702 57057 intergenic 1.47 0 0,0,0 0 0,0,0 0 2.4624673572042 0 0 2.68536726431463 0 0 3.70345444029655 0 0 0 chimp,horse,human,marmoset,orangutan, lincRNA lincRNA A549@0,AG04450@0,BJ@0.0034275,GM12878@0,H1HESC@0,HELAS3@0.03403,HEPG2@0,HMEC@0,HSMM@0.0029145,HUVEC@0,K562@0,MCF7@0,NHEK@0.0248037,NHLF@0.0027635,SKNSHRA@0, 0 0 0 0 ENSG00000223829.1 ENST00000438639.1 chr7:47009319-47012290 2 607 2362 intergenic -2.27 0 0,0,0 0 0,0,0 0 0 0 0 1.4034716342083 0 0 1.45850973751058 0 1 1 chimp,human,macaque,marmoset,orangutan, lincRNA retained_intron A549@0,AG04450@0,BJ@0.0034275,GM12878@0,H1HESC@0,HELAS3@0.03403,HEPG2@0,HMEC@0,HSMM@0.0029145,HUVEC@0,K562@0,MCF7@0,NHEK@0.0248037,NHLF@0.0027635,SKNSHRA@0, 0 0 0 0 ENSG00000229192.2 ENST00000455078.1 chr7:47040218-47118711 4 342 78145 intergenic -3.00 0 0,0,0 0 0,0,0 0 7.3944718152153 0 9.62573099415205 4.62889500287926 0 6.76023391812866 22.1158615394459 0 0 0 chimp,cow,elephant,horse,human,macaque,marmoset,orangutan,pig,rat, processed_transcript processed_transcript A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000229192.2 ENST00000412996.1 chr7:47040219-47118726 4 428 78073 intergenic -4.76 0 0,0,0 0 0,0,0 0 7.40129109935573 0 7.69158878504673 4.63316383384781 0 5.4018691588785 22.1362570927209 0 0 0 cat,chimp,cow,dog,elephant,guinea_pig,horse,human,macaque,marmoset,mouse,opossum,orangutan,panda,pig,rabbit,rat, processed_transcript processed_transcript A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000236078.1 ENST00000429010.1 chr7:47661537-47669491 4 2757 5191 intergenic 7.95 0 0,1,0 0 0,0,0 0 0 0 3.48168298875589 0 0 3.54406964091404 0.468117896359083 0 0 0 chimp,human, lincRNA lincRNA A549@0.187855,AG04450@0.039374,BJ@0.033108,GM12878@0,H1HESC@0.003585,HELAS3@0.230103,HEPG2@0.100242,HMEC@0,HSMM@0.058612,HUVEC@0.007595,K562@0,MCF7@0.0326175,NHEK@0.00141133,NHLF@0.104902,SKNSHRA@0.091388, 0 0 0 0 ENSG00000146666.4 ENST00000412730.1 chr7:47801074-47806370 3 1185 4107 intergenic 0.32 1 0,0,1 0 0,0,0 38.8607594936709 32.3374726077429 0 9.44641350210971 9.04187971755539 0 8.14345991561181 13.373021670319 0 0 0 chimp,horse,human,macaque,marmoset,orangutan, antisense antisense A549@0.262394,AG04450@0.0252755,BJ@0.110095,GM12878@0,H1HESC@0,HELAS3@0.588865,HEPG2@0.106387,HMEC@0.020944,HSMM@0.053897,HUVEC@0.0566115,K562@0,MCF7@0.13682,NHEK@0.00112567,NHLF@0.0230665,SKNSHRA@0.803076, 0 0 0 0 ENSG00000146666.4 ENST00000541385.1 chr7:47802947-47806369 2 1171 2249 intergenic 0.32 1 0,0,1 0 0,0,0 40.999146029035 58.3059137394398 0 9.55935098206661 16.5117830146732 0 8.24081981212639 24.4210760337928 0 0 0 chimp,horse,human,macaque,marmoset,orangutan, antisense antisense A549@0.262394,AG04450@0.0252755,BJ@0.110095,GM12878@0,H1HESC@0,HELAS3@0.588865,HEPG2@0.106387,HMEC@0.020944,HSMM@0.053897,HUVEC@0.0566115,K562@0,MCF7@0.13682,NHEK@0.00112567,NHLF@0.0230665,SKNSHRA@0.803076, 0 0 0 0 ENSG00000228173.1 ENST00000456513.1 chr7:48700171-48702901 2 371 2357 intergenic -0.06 0 0,0,0 0 0,0,0 0 0 0 32.7169811320755 1.47305897327111 0 35.8867924528302 1.53839626644039 0 0 0 chimp,dog,elephant,guinea_pig,horse,human,macaque,mouse,orangutan,panda,rat, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000234686.1 ENST00000440455.1 chr7:49269733-49294412 4 688 23985 intergenic -2.20 0 0,1,0 0 0,0,0 22.3837209302326 1.09735251198666 6.16 0 0.406462372316031 0 2.11918604651163 0.434104648738795 0 0 0 chimp,elephant,horse,human,macaque,marmoset,orangutan,panda, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000228005.1 ENST00000454877.1 chr7:50181136-50182419 3 764 515 intronic 2.60 0 0,0,1 0 0,0,0 14.2408376963351 0 0 4.76570680628272 0 0 11.151832460733 0 0 0 0 chimp,human,macaque,marmoset,orangutan, antisense antisense A549@0,AG04450@0,BJ@0,GM12878@0.0918655,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000231681.1 ENST00000457592.1 chr7:50241835-50243914 2 806 1271 intergenic 3.39 0 0,0,1 0 0,0,0 0 0 0 0 0 2.104 0 0 2.7 0 0 chimp,horse,human,macaque,marmoset,orangutan, lincRNA lincRNA A549@0,AG04450@0.007328,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000235620.1 ENST00000440351.1 chr7:50314386-50315218 3 357 471 intergenic -2.43 0 0,0,0 0 0,0,0 0 0 0 0 0 0 0 2.06369426751592 0 0 0 chimp,human,macaque,marmoset,orangutan, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0.0073765,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000226122.1 ENST00000454521.1 chr7:50599457-50611161 5 1771 9925 exonic 7.87 0 0,1,1 0 0,0,0 21.0796160361378 0.610680100755667 0 32.3749294184077 3.76523929471033 0 36.7588932806324 5.37894206549118 0 0 0 chimp,horse,human,macaque,marmoset,orangutan, antisense antisense A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0.0025445,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0.0023155,NHEK@0,NHLF@0,SKNSHRA@0.0031315, 0 0 0 0 ENSG00000236046.1 ENST00000422831.1 chr7:50907060-50909689 2 480 2147 intergenic 1.51 0 0,1,0 0 0,0,0 0 0 0 0 0 0 0 0 0 0 0 chimp,human,macaque,orangutan, lincRNA lincRNA A549@0.01288,AG04450@0,BJ@0,GM12878@0,H1HESC@0.008608,HELAS3@0.0770865,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000228204.1 ENST00000420449.1 chr7:50934444-51088749 4 281 154018 exonic 0 0 0,0,0 0 0,0,0 0 4.95852432832526 0 8.22775800711744 2.84466750639536 3.945 25.7722419928826 4.18243971483853 4.17 0 0 chimp,elephant,human,macaque,marmoset,opossum,orangutan, antisense antisense A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0.395336,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000229403.1 ENST00000414409.1 chr7:51681947-51698566 2 586 16031 intergenic 1.08 0 0,0,0 0 0,0,0 0 0 0 0 4.40883288628283 7.006 0 4.92988584617304 7.18 0 0 chimp,dog,elephant,horse,human,macaque,marmoset,orangutan, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000233960.1 ENST00000441295.1 chr7:52232931-52260609 4 734 26938 intergenic 0.45 0 0,0,0 0 0,0,0 0 0.674511842007573 0 0 0.423713712970525 0 0 2.16278120127701 0 0 0 chimp,horse,human,macaque,marmoset,orangutan,panda, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000234105.1 ENST00000457372.1 chr7:53582685-53584809 2 364 1758 intergenic -3.72 0 0,0,0 0 0,0,0 0 0 0 0 0 0 0 0 0 0 0 chimp,horse,human,macaque,marmoset,orangutan,panda, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000228627.1 ENST00000412800.1 chr7:53626907-53635942 3 434 8597 intergenic -4.78 0 0,0,0 0 0,0,0 0 0 48.927 0 0 77.473 0 0 79.409 0 0 cat,chimp,dog,elephant,horse,human,macaque,marmoset,orangutan,panda, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0.0056205,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000205628.2 ENST00000380970.2 chr7:53723202-53879624 6 3478 152934 intergenic 0.04 0 0,1,0 1 0,0,0 0 1.59636182928584 0 0 2.46170243372958 0 4.5448533640023 4.20801129899172 0 0 0 chimp,elephant,horse,human,macaque,marmoset,orangutan, lincRNA processed_transcript A549@0,AG04450@0,BJ@0.120622,GM12878@0.0767,H1HESC@0,HELAS3@0,HEPG2@0.002523,HMEC@0,HSMM@0.0061605,HUVEC@0.007528,K562@1.42756,MCF7@0.157529,NHEK@0.00378267,NHLF@0.0061605,SKNSHRA@0, 0 0 0 0 ENSG00000238131.1 ENST00000418679.1 chr7:53994369-54015437 3 622 20442 intergenic 1.90 0 0,0,0 0 0,0,0 0 4.56379023578906 0 2.68971061093248 5.76259661481264 0 2.73472668810289 5.91316896585461 0 0 0 chimp,cow,human,macaque,marmoset,orangutan,rabbit, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000231427.1 ENST00000458615.1 chr7:54398390-54417542 3 676 18472 intergenic -0.48 0 0,0,0 0 0,0,0 26.8786982248521 4.64400173235167 0 35.164201183432 10.5409268081421 0 38.7869822485207 12.1089757470767 0 0 0 cat,chimp,cow,dog,elephant,guinea_pig,horse,human,macaque,marmoset,orangutan,panda,pig,rat, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0.023436,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000231427.1 ENST00000426205.1 chr7:54398472-54417290 3 809 18005 intergenic -0.08 0 0,0,0 0 0,0,0 0 4.76445431824493 0 0 10.8143293529575 0 0 12.4230491530131 0 0 0 chimp,cow,dog,elephant,horse,human,macaque,marmoset,mouse,orangutan,rabbit,rat, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0.023436,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000228735.1 ENST00000439027.1 chr7:54643745-54646487 2 755 1985 intergenic -3.20 0 0,0,0 0 0,0,0 0 0 0 0 0 0 0 0 0 0 0 chimp,human,macaque,marmoset,orangutan, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000234707.2 ENST00000439413.2 chr7:54827118-54872621 3 478 45021 intronic -9.96 0 0,0,1 0 0,0,0 0 0.408746640605913 0 0 1.65908535637341 11.305 0 11.5066743664349 12.961 0 0 chimp,human,marmoset,orangutan, antisense antisense A549@0.0420695,AG04450@0.0595795,BJ@0.033667,GM12878@0.147153,H1HESC@0.02239,HELAS3@0.075837,HEPG2@0.0580835,HMEC@0.025538,HSMM@0.0090165,HUVEC@0.007266,K562@0.0379875,MCF7@0.0189215,NHEK@0.0522587,NHLF@0.059109,SKNSHRA@0.052334, 0 0 0 0 ENSG00000224057.1 ENST00000442411.1 chr7:55247443-55256627 2 2804 6378 exonic 4.54 0 1,1,1 0 0,0,0 32.8808844507846 0 0 31.0520684736091 2.90482910003136 0 38.490727532097 2.97209156475384 0 0 0 chimp,human,orangutan, antisense antisense A549@0.0033185,AG04450@0.0034475,BJ@0,GM12878@0,H1HESC@0.012466,HELAS3@0.760145,HEPG2@2.66678,HMEC@0.312036,HSMM@0.0013335,HUVEC@0,K562@0.001655,MCF7@0,NHEK@0.00209833,NHLF@0,SKNSHRA@0.00162, 0 0 0 0 ENSG00000223475.1 ENST00000454777.1 chr7:55640864-55656029 3 549 14612 intergenic 7.57 0 0,0,0 0 0,0,0 0 2.02764850807555 0 0 0.431973720229948 6.46 92.0528233151184 15.5235422940049 17.226 0 0 chimp,human,macaque,orangutan, antisense antisense A549@0.0564535,AG04450@0.0648675,BJ@0.0579055,GM12878@0.0680415,H1HESC@0,HELAS3@0,HEPG2@0.015439,HMEC@0,HSMM@0.0264945,HUVEC@0.120624,K562@0,MCF7@0.003642,NHEK@0,NHLF@0.013982,SKNSHRA@0.180522, 0 0 0 0 ENSG00000233977.1 ENST00000421500.1 chr7:55659767-55660886 2 937 180 intergenic 0.48 0 0,0,0 0 0,0,0 0 0 0 33.4578441835646 0 0 227.216648879402 31.0055555555556 123.948 0 0 cat,chimp,cow,dog,elephant,horse,human,macaque,marmoset,orangutan,panda,pig, lincRNA lincRNA A549@0.0105065,AG04450@0.011884,BJ@0.0104875,GM12878@0.0313675,H1HESC@0,HELAS3@0,HEPG2@0.018152,HMEC@0,HSMM@0,HUVEC@0.0063385,K562@0,MCF7@0.004282,NHEK@0,NHLF@0.0124215,SKNSHRA@0.047685, 0 0 0 0 ENSG00000231394.1 ENST00000449899.1 chr7:55661470-55662699 2 541 686 intergenic -11.41 0 0,0,0 0 0,0,0 0 0 0 0 0 13.26 0 0 76.908 0 0 chimp,human,macaque,orangutan, lincRNA lincRNA A549@0.006211,AG04450@0.0390345,BJ@0.045031,GM12878@0.0295825,H1HESC@0.022049,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0.004198,HUVEC@0.018914,K562@0,MCF7@0.03392,NHEK@0,NHLF@0,SKNSHRA@0.152058, 0 0 0 0 ENSG00000185290.3 ENST00000329309.3 chr7:56182374-56184093 2 601 1116 intergenic 52.53 1 1,1,1 0 0,0,1 0 0 0 254.564059900166 0.507168458781362 0 255.567387687188 0.528673835125448 0 0 0 cat,chimp,cow,dog,horse,human,macaque,opossum,orangutan,rabbit, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0.027162,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0.012847,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000225488.1 ENST00000436042.1 chr7:56549798-56550988 2 671 517 intergenic 0.90 1 0,0,0 0 0,0,0 0 0 0 0 0 0 0 0 0 0 0 chimp,human,macaque,marmoset,orangutan,panda, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0.0103865,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000233288.1 ENST00000429367.1 chr7:56601923-56605823 2 2739 1159 intergenic 2.18 0 0,1,1 0 0,0,0 0 0 0 0 0 0 0 0 0 0 0 chimp,human,macaque,orangutan, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0.0019905,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0.0238745, 0 0 0 0 ENSG00000234089.1 ENST00000442649.1 chr7:57277572-57289866 2 405 11887 intergenic 0 0 0,0,0 0 0,0,0 0 0 0 0 0 0 0 0 0 0 0 chimp,dog,horse,human,macaque,marmoset,orangutan, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000234089.1 ENST00000415836.1 chr7:57288876-57289881 2 562 441 intergenic -8.45 0 0,0,0 0 0,0,0 0 0 0 0 0 0 0 0 0 0 0 chimp,human,macaque,marmoset,orangutan, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000227148.1 ENST00000450891.1 chr7:62505205-62514809 2 417 9185 intergenic -1.63 0 0,0,0 0 0,0,0 0 0 0 0 4.79335873707131 0 0 4.81872618399564 0 0 0 cat,chimp,cow,horse,human,macaque,marmoset, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000244550.1 ENST00000451381.1 chr7:62693493-62702023 3 348 8178 intergenic 0 0 0,0,0 0 0,0,0 0 0 0 66.1034482758621 0.36463683052091 35.784 610.247126436782 84.7241379310345 93.788 0 0 cat,chimp,cow,dog,elephant,guinea_pig,horse,human,macaque,marmoset,mouse,orangutan,panda,pig,rabbit,rat, processed_transcript processed_transcript A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000226587.1 ENST00000426550.1 chr7:62787052-62814704 3 514 27134 encompassing 2.79 0 0,0,0 0 0,0,0 0 0 0 0 0 0 55.307392996109 41.7527087786541 0 0 0 chimp,cow,guinea_pig,horse,human,macaque,marmoset,mouse,orangutan,platypus,rabbit,rat, processed_transcript processed_transcript A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 136 2 82 2 ENSG00000229301.1 ENST00000418297.1 chr7:62814835-62819684 3 525 4320 intergenic -0.06 0 0,0,0 0 0,0,0 0 0 0 0 0 0 0 0 0 0 0 chimp,human,macaque,marmoset,orangutan, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 155 2 0 0 ENSG00000230600.1 ENST00000425228.1 chr7:62840844-62846167 2 337 4984 intergenic -3.82 0 0,1,0 0 0,0,0 0 0 0 0 0 0 0 0 0 0 0 chimp,cow,human,macaque,marmoset,orangutan,panda,pig,rabbit, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000232817.1 ENST00000450077.1 chr7:62849186-62854035 3 525 4320 intergenic -0.06 0 0,0,0 0 0,0,0 0 0 0 0 0 0 0 0 0 0 0 chimp,human,macaque,marmoset,orangutan, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 155 2 0 0 ENSG00000227305.1 ENST00000424036.1 chr7:62854166-62882424 4 697 27555 intergenic 2.79 0 0,0,0 0 0,0,0 0 0 0 0 0 0 134.816355810617 42.9193249863908 0 0 0 chimp,guinea_pig,horse,human,macaque,marmoset,mouse,orangutan,platypus,rabbit, processed_transcript processed_transcript A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 136 2 82 2 ENSG00000234387.1 ENST00000451103.1 chr7:62854655-62855817 2 671 489 intergenic -1.36 0 0,0,0 0 0,0,0 0 0 0 0 0 0 0 0 0 0 0 chimp,human,macaque,marmoset,orangutan, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0.0045495,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0.0082635, 0 0 0 0 ENSG00000236299.1 ENST00000433918.1 chr7:63348578-63359219 3 439 10198 intergenic 0.27 0 0,0,0 0 0,0,0 0 116.355167679937 0 0 123.619925475583 0 11.371298405467 198.874191017847 0 0 0 chimp,human,mouse, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0.010266, 0 0 0 0 ENSG00000226581.1 ENST00000450544.1 chr7:63361201-63378372 4 633 16532 intergenic 4.05 1 0,1,0 0 0,0,0 0 0 0 0 36.8230099201549 0 0 73.1444471328333 0 0 0 chimp,human,orangutan, lincRNA lincRNA A549@0.004336,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0.051143,NHEK@0.013744,NHLF@0,SKNSHRA@0.408912, 0 0 0 0 ENSG00000228564.1 ENST00000441691.1 chr7:63488230-63489152 3 537 381 intergenic -0.89 0 0,0,0 0 0,0,0 0 0 0 0 0 0 0 0 0 0 0 NA antisense antisense A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000228564.1 ENST00000451440.1 chr7:63488443-63490483 3 528 1508 intergenic -4.19 0 0,0,0 0 0,0,0 0 0 0 0 0 0 0 0 0 0 0 NA antisense antisense A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000244117.1 ENST00000430271.1 chr7:63539167-63545179 2 746 5264 intronic -1.13 0 0,0,0 0 0,0,0 0 0 0 0 0 0 129.045576407507 19.77773556231 193.364 0 0 cat,chimp,cow,dog,elephant,guinea_pig,horse,human,macaque,marmoset,mouse,opossum,orangutan,panda,pig,platypus,rabbit,rat, processed_transcript processed_transcript A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0.0014515, 0 0 0 0 ENSG00000244008.1 ENST00000434932.1 chr7:63580809-63611099 2 638 29650 intronic -0.93 0 0,0,0 0 0,0,0 0 4.22620573355818 0 0 6.72161888701518 0 134.6065830721 27.455042158516 114.642 0 0 cat,chimp,cow,dog,elephant,guinea_pig,horse,human,macaque,marmoset,mouse,opossum,orangutan,panda,pig,platypus,rabbit,rat, processed_transcript processed_transcript A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000229881.1 ENST00000442436.1 chr7:63600873-63610436 3 445 9114 intronic 2.48 0 0,1,0 0 0,0,0 36.2831460674157 11.9002633311389 0 36.1797752808989 14.1073074391047 0 126.395505617978 74.4579767390827 0 0 0 cat,chimp,cow,dog,elephant,guinea_pig,horse,human,macaque,marmoset,mouse,opossum,orangutan,panda,pig,platypus,rabbit,rat, sense_intronic sense_intronic A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000189316.3 ENST00000340779.3 chr7:64348905-64350478 3 1059 510 intergenic 1.03 1 0,0,1 0 0,0,0 0 0 0 0 0 0 0 0 0 0 0 chimp,human,macaque,marmoset,orangutan, antisense antisense A549@0.002601,AG04450@0,BJ@0.0023185,GM12878@0,H1HESC@0.112639,HELAS3@0.007861,HEPG2@0.063382,HMEC@0,HSMM@0,HUVEC@0.004579,K562@0.0043725,MCF7@0,NHEK@0.00985733,NHLF@0,SKNSHRA@0.00428, 0 0 0 0 ENSG00000245043.1 ENST00000501153.1 chr7:64533485-64541641 3 1518 6634 intergenic 8.28 0 0,1,0 1 0,0,0 0 0 0 38.2516469038208 5.17334941211938 0 141.036890645586 13.3690081398854 0 0 1 chimp,human,orangutan, lincRNA lincRNA A549@0.247295,AG04450@0.1455,BJ@0.12463,GM12878@0.443163,H1HESC@0.574586,HELAS3@0.803456,HEPG2@0.71998,HMEC@0.102298,HSMM@0.122879,HUVEC@0.446256,K562@0.371012,MCF7@1.07479,NHEK@0.172341,NHLF@0.187536,SKNSHRA@0.540453, 0 0 0 0 ENSG00000238124.1 ENST00000453648.1 chr7:64927984-64928351 2 162 203 intergenic 0 0 0,0,0 0 0,0,0 0 0 0 402.320987654321 275.172413793103 517.162 433.148148148148 300.43842364532 520.284 0 0 cat,chimp,cow,dog,elephant,horse,human,macaque,marmoset,orangutan,panda,pig,rat, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000234185.1 ENST00000435524.1 chr7:65584590-65593711 3 374 8743 intronic 3.10 0 0,0,0 0 0,0,0 0 1.8677799382363 0 0 6.21731671051127 0 0 8.87807388768157 0 0 0 chimp,human,macaque,marmoset,orangutan,panda, antisense antisense A549@0,AG04450@0,BJ@0.006419,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0.269981, 0 0 0 0 ENSG00000179406.6 ENST00000421767.1 chr7:65841031-65866325 7 4695 20587 intergenic 10.45 1 0,0,1 0 0,0,0 0 0 0 0 0 0 105.830457933972 12.4614076844611 0 0 0 chimp,human,macaque,marmoset,orangutan,rabbit, lincRNA non_coding A549@0.648725,AG04450@0.104532,BJ@0.258634,GM12878@0.804821,H1HESC@1.39381,HELAS3@0.608617,HEPG2@0.770819,HMEC@0.134978,HSMM@0.229661,HUVEC@0.492384,K562@0.831861,MCF7@0.719805,NHEK@0.340922,NHLF@0.099953,SKNSHRA@1.52684, 0 0 0 0 ENSG00000179406.6 ENST00000416572.1 chr7:65844814-65860906 4 552 15534 intergenic 1.91 0 0,1,0 0 0,0,0 0 0 0 0 0 0 0 16.5149349813313 0 0 0 chimp,human,macaque,marmoset,orangutan,pig, lincRNA lincRNA A549@0.648725,AG04450@0.104532,BJ@0.258634,GM12878@0.804821,H1HESC@1.39381,HELAS3@0.608617,HEPG2@0.770819,HMEC@0.134978,HSMM@0.229661,HUVEC@0.492384,K562@0.831861,MCF7@0.719805,NHEK@0.340922,NHLF@0.099953,SKNSHRA@1.52684, 0 0 0 0 ENSG00000179406.6 ENST00000438894.1 chr7:65847406-65856529 4 530 8587 intergenic 1.07 0 0,0,0 0 0,0,0 0 0 0 0 0 0 217.041509433962 16.3703272388494 0 0 0 cat,chimp,cow,dog,guinea_pig,horse,human,macaque,marmoset,mouse,opossum,orangutan,panda,rabbit,rat, lincRNA lincRNA A549@0.648725,AG04450@0.104532,BJ@0.258634,GM12878@0.804821,H1HESC@1.39381,HELAS3@0.608617,HEPG2@0.770819,HMEC@0.134978,HSMM@0.229661,HUVEC@0.492384,K562@0.831861,MCF7@0.719805,NHEK@0.340922,NHLF@0.099953,SKNSHRA@1.52684, 0 0 0 0 ENSG00000179406.6 ENST00000416366.1 chr7:65855118-65858716 2 518 3078 intergenic -1.22 0 0,0,0 0 0,0,0 0 0 0 0 0 0 0 0 0 0 0 human, lincRNA lincRNA A549@0.648725,AG04450@0.104532,BJ@0.258634,GM12878@0.804821,H1HESC@1.39381,HELAS3@0.608617,HEPG2@0.770819,HMEC@0.134978,HSMM@0.229661,HUVEC@0.492384,K562@0.831861,MCF7@0.719805,NHEK@0.340922,NHLF@0.099953,SKNSHRA@1.52684, 0 0 0 0 ENSG00000223473.1 ENST00000450353.1 chr7:65956083-65958525 2 697 1743 intergenic -4.60 0 0,1,0 1 0,0,0 0 0 0 0 0 0 0 0 0 0 0 chimp,human,macaque,marmoset,orangutan, lincRNA lincRNA A549@1.56669,AG04450@0.476731,BJ@0.758122,GM12878@1.69664,H1HESC@2.98441,HELAS3@1.82094,HEPG2@1.91301,HMEC@0.178763,HSMM@0.5093,HUVEC@1.05574,K562@1.90605,MCF7@3.18192,NHEK@0.852484,NHLF@0.620273,SKNSHRA@2.43043, 0 0 0 0 ENSG00000223473.1 ENST00000412091.1 chr7:65956996-65958553 2 680 875 intergenic 3.13 0 0,1,0 1 0,0,0 0 0 0 0 0 0 0 0 0 0 0 chimp,human,macaque,marmoset,orangutan, lincRNA lincRNA A549@1.56669,AG04450@0.476731,BJ@0.758122,GM12878@1.69664,H1HESC@2.98441,HELAS3@1.82094,HEPG2@1.91301,HMEC@0.178763,HSMM@0.5093,HUVEC@1.05574,K562@1.90605,MCF7@3.18192,NHEK@0.852484,NHLF@0.620273,SKNSHRA@2.43043, 0 0 0 0 ENSG00000237310.1 ENST00000445681.1 chr7:65958693-65960461 2 538 1228 intergenic 7.28 1 1,1,1 1 0,0,0 0 0 0 14.2899628252788 0 0 14.4628252788104 0 0 0 0 cat,chimp,cow,dog,horse,human,macaque,orangutan,pig,rabbit, lincRNA lincRNA A549@1.9048,AG04450@0.738991,BJ@0.797643,GM12878@0.983807,H1HESC@3.64028,HELAS3@2.51729,HEPG2@2.28334,HMEC@0.752467,HSMM@0.487242,HUVEC@0.863657,K562@2.2885,MCF7@0.353782,NHEK@0.472092,NHLF@0.488684,SKNSHRA@5.33352, 0 0 0 0 ENSG00000237310.1 ENST00000452565.1 chr7:65958773-65960459 2 452 1232 intergenic -1.07 1 1,1,1 1 0,0,0 0 0 0 17.0088495575221 0 0 17.2146017699115 0 0 0 0 cat,chimp,cow,dog,horse,human,macaque,orangutan,panda,rabbit, lincRNA lincRNA A549@1.9048,AG04450@0.738991,BJ@0.797643,GM12878@0.983807,H1HESC@3.64028,HELAS3@2.51729,HEPG2@2.28334,HMEC@0.752467,HSMM@0.487242,HUVEC@0.863657,K562@2.2885,MCF7@0.353782,NHEK@0.472092,NHLF@0.488684,SKNSHRA@5.33352, 0 0 0 0 ENSG00000229180.2 ENST00000449307.1 chr7:65993425-66007536 2 4740 9369 intergenic -0.65 0 0,0,0 0 0,0,0 0 0 0 0.705907172995781 0.127548297577116 0 0.741350210970464 0.133952396200235 0 0 0 human,orangutan, lincRNA lincRNA A549@0.57526,AG04450@0.445267,BJ@0.965074,GM12878@0.759699,H1HESC@0.897712,HELAS3@1.7074,HEPG2@2.16312,HMEC@0.657738,HSMM@0.744349,HUVEC@1.37568,K562@0.676117,MCF7@1.20493,NHEK@1.00213,NHLF@0.804539,SKNSHRA@1.44132, 0 0 0 0 ENSG00000226824.2 ENST00000448096.1 chr7:66119525-66131286 3 390 11367 intergenic -4.07 0 0,1,0 1 0,0,0 0 0 0 4.45128205128205 0.231283540072139 3.51 4.50512820512821 0.235154394299287 3.536 0 0 chimp,human,macaque,marmoset,orangutan, sense_intronic sense_intronic A549@0.076476,AG04450@0.186314,BJ@0.317004,GM12878@0.136047,H1HESC@0.104017,HELAS3@0.449537,HEPG2@0.334786,HMEC@0.175352,HSMM@0.41172,HUVEC@0.39773,K562@0.472519,MCF7@0.180584,NHEK@0.213059,NHLF@0.140452,SKNSHRA@0.101405, 0 0 0 0 ENSG00000226824.2 ENST00000439360.1 chr7:66119538-66134285 4 504 14237 intergenic 7.14 0 0,1,0 1 0,0,0 0 0 0 3.44444444444444 0.184659689541336 3.51 3.48611111111111 0.187750228278429 3.536 0 0 chimp,human,macaque,marmoset,orangutan, sense_intronic sense_intronic A549@0.076476,AG04450@0.186314,BJ@0.317004,GM12878@0.136047,H1HESC@0.104017,HELAS3@0.449537,HEPG2@0.334786,HMEC@0.175352,HSMM@0.41172,HUVEC@0.39773,K562@0.472519,MCF7@0.180584,NHEK@0.213059,NHLF@0.140452,SKNSHRA@0.101405, 0 0 0 0 ENSG00000226824.2 ENST00000428557.1 chr7:66119573-66134842 3 301 14964 intergenic 0.57 0 1,1,1 1 0,0,0 0 0 0 5.76744186046512 0.175688318631382 3.51 5.83720930232558 0.178628708901363 3.536 0 0 chimp,human,macaque,marmoset,orangutan, sense_intronic sense_intronic A549@0.076476,AG04450@0.186314,BJ@0.317004,GM12878@0.136047,H1HESC@0.104017,HELAS3@0.449537,HEPG2@0.334786,HMEC@0.175352,HSMM@0.41172,HUVEC@0.39773,K562@0.472519,MCF7@0.180584,NHEK@0.213059,NHLF@0.140452,SKNSHRA@0.101405, 0 0 0 0 ENSG00000235475.1 ENST00000430244.1 chr7:66800963-66805011 3 486 3558 intergenic -2.99 0 1,1,1 0 0,0,0 0 0 0 185.530864197531 137.019111860596 353.836 188.888888888889 120.185497470489 342.154 0 0 chimp,human,macaque,marmoset,orangutan,rat, lincRNA lincRNA A549@0.678767,AG04450@0.215067,BJ@0.356756,GM12878@0.867677,H1HESC@0.218687,HELAS3@0.614481,HEPG2@0.52435,HMEC@0.058614,HSMM@0.141579,HUVEC@0.422818,K562@0.359152,MCF7@0.357905,NHEK@0.302076,NHLF@0.48005,SKNSHRA@0.908672, 0 0 0 0 ENSG00000233423.1 ENST00000420758.1 chr7:67156045-67162016 2 573 5396 intergenic -1.07 0 0,1,0 0 0,0,0 0 1.74759080800593 0 0 3.5909933283914 0 0 4.68532246108228 0 0 0 cat,chimp,horse,human,macaque,marmoset,orangutan,pig, lincRNA lincRNA A549@0.0129485,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0.0034965,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000225209.1 ENST00000444745.1 chr7:67485240-67497677 6 504 11923 intergenic 0.60 0 0,0,0 0 0,0,0 16.1111111111111 9.741004780676 0 49.4424603174603 12.9455673907574 0 34.75 13.4966032038916 0 0 0 chimp,cow,human,macaque,marmoset,orangutan, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000236531.1 ENST00000424888.1 chr7:67582818-67584196 2 703 673 intergenic -7.81 0 0,0,0 0 0,0,0 0 0 0 0 0 0 0 0 0 0 0 chimp,human,macaque,orangutan, lincRNA lincRNA A549@0.006158,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0.0078885, 0 0 0 0 ENSG00000226829.1 ENST00000446187.1 chr7:67615270-67753220 5 636 137306 intergenic -2.57 0 0,0,0 0 0,0,0 0 4.38179686248234 58.74 0 8.51954757985812 71.753 0 15.5861360756267 71.808 0 0 chimp,dog,horse,human,macaque,marmoset,orangutan, processed_transcript processed_transcript A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000233689.1 ENST00000447158.1 chr7:68505139-68511790 3 416 6231 intergenic 0 0 0,1,0 0 0,0,0 83.6538461538462 21.9595570534425 0 41.2980769230769 20.9913336543091 0 85.1850961538461 21.4607607125662 0 0 0 chimp,cow,dog,guinea_pig,horse,human,macaque,marmoset,orangutan,pig, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000236839.1 ENST00000413094.1 chr7:68652820-68654305 3 436 1045 intergenic -3.71 0 0,0,0 0 0,0,0 0 0 0 0 0 0 0 0 0 0 0 chimp,horse,human,macaque,marmoset,orangutan, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000225718.1 ENST00000435148.1 chr7:68689683-68895909 3 699 205523 intergenic 5.90 0 0,0,1 0 0,0,0 0 16.3691217041402 0 9.4206008583691 17.6307079986182 0 11.997138769671 28.2035003381617 0 0 0 chimp,cow,dog,elephant,guinea_pig,horse,human,macaque,marmoset,orangutan,panda, processed_transcript processed_transcript A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0.0041455,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000225718.1 ENST00000426356.1 chr7:68734765-68736993 2 319 1907 intergenic 0 0 0,0,0 0 0,0,0 31.0031347962382 5.66858940744625 23.24 31.1912225705329 14.9564761405349 52.442 50.7617554858934 15.9239643418983 55.034 0 0 cat,chimp,cow,dog,elephant,guinea_pig,horse,human,macaque,marmoset,mouse,orangutan,panda,rabbit,rat, processed_transcript processed_transcript A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0.0041455,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000225718.1 ENST00000421513.1 chr7:68824068-68895857 3 650 71135 intergenic -8.08 0 0,0,0 0 0,0,0 0 20.6951430378857 0 7.25692307692308 20.8638644830252 0 10.1015384615385 21.5708301117593 0 0 0 chimp,guinea_pig,human,macaque,marmoset,orangutan,rabbit, processed_transcript processed_transcript A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0.0041455,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000234215.1 ENST00000436600.1 chr7:69061133-69062434 2 500 799 intergenic -2.38 0 0,1,1 0 0,0,0 50.246 18.0100125156446 112.48 25.212 19.7496871088861 124.92 30.748 20.081351689612 124.501 0 0 cat,chimp,elephant,guinea_pig,horse,human,macaque,marmoset,mouse,orangutan,panda,pig,rabbit,rat, antisense antisense A549@0.138784,AG04450@0,BJ@0,GM12878@0.098486,H1HESC@0.0595735,HELAS3@0,HEPG2@0.004334,HMEC@0,HSMM@0,HUVEC@0.0224955,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0.605273, 0 0 0 0 ENSG00000225969.1 ENST00000427153.1 chr7:73149368-73150384 4 554 456 intergenic 0.59 1 0,1,0 1 0,0,0 48.1768953068592 9.23245614035088 0 198.900722021661 15.0811403508772 15.199 193.882671480144 16.4364035087719 14.952 0 0 cat,chimp,cow,dog,elephant,guinea_pig,horse,human,macaque,marmoset,mouse,opossum,orangutan,panda,pig,platypus,rabbit,rat, antisense antisense A549@0.281476,AG04450@0.020695,BJ@2.15313,GM12878@0.147556,H1HESC@0.124778,HELAS3@0.036444,HEPG2@0.065205,HMEC@0.029352,HSMM@0.467871,HUVEC@0.40168,K562@0.004798,MCF7@0.176002,NHEK@0,NHLF@0.635611,SKNSHRA@0.846135, 0 0 0 0 ENSG00000214738.2 ENST00000378769.3 chr7:73150728-73152026 2 318 978 exonic 5.14 0 0,0,1 0 0,0,0 153.748427672956 49.1390593047035 31.395 113.427672955975 100.784253578732 101.559 152.462264150943 149.059304703477 104.133 0 0 chimp,guinea_pig,horse,human,macaque,marmoset,mouse,orangutan,pig, antisense antisense A549@0.138253,AG04450@0.0073595,BJ@0.079462,GM12878@0.072989,H1HESC@0,HELAS3@0.0165875,HEPG2@0.0135985,HMEC@0,HSMM@0.027107,HUVEC@0,K562@0.014512,MCF7@0.0191335,NHEK@0,NHLF@0.0182925,SKNSHRA@0.115752, 192 2 0 0 ENSG00000232415.1 ENST00000435932.1 chr7:73473906-73476614 2 530 2176 exonic -1.40 0 0,1,0 1 0,0,0 0 11.5992647058824 0 9.75094339622641 27.8042279411765 1.673 13.3566037735849 31.0335477941176 4.26 0 0 cat,chimp,cow,dog,horse,human,macaque,marmoset,orangutan,panda,pig,rabbit,rat, antisense antisense A549@0.376526,AG04450@0.0551085,BJ@0.140113,GM12878@0,H1HESC@0,HELAS3@0.142768,HEPG2@0.203684,HMEC@0,HSMM@0.845967,HUVEC@0.14777,K562@0.022579,MCF7@0,NHEK@0.0641227,NHLF@0.317643,SKNSHRA@0.670592, 0 0 0 0 ENSG00000232729.1 ENST00000450426.1 chr7:74103391-74143103 4 564 39142 exonic 9.35 0 0,0,0 0 0,0,0 162.609929078014 15.9171478207552 46.8 172.299645390071 17.1379592253845 47.258 167.22695035461 16.3890961115937 51.829 0 0 cat,chimp,dog,elephant,horse,human,macaque,marmoset,opossum,orangutan,panda, processed_transcript processed_transcript A549@0.190311,AG04450@0.100436,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0.045873, 0 0 0 0 ENSG00000232729.1 ENST00000434256.1 chr7:74113790-74143187 3 1184 28209 exonic -0.89 0 0,0,0 0 0,0,0 65.9864864864865 19.6206529830905 18.36 71.2871621621622 19.137757453295 18.348 68.6579391891892 18.3793115672303 21.936 0 0 chimp,dog,human,macaque,marmoset,orangutan,panda, processed_transcript retained_intron A549@0.190311,AG04450@0.100436,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0.045873, 0 0 0 0 ENSG00000224804.4 ENST00000430941.1 chr7:74855312-74864233 3 770 8147 intronic 0.30 0 0,0,0 0 0,0,0 0 5.57751319504112 0 3.1038961038961 9.04615195777587 0 18.0922077922078 144.769117466552 0 0 0 chimp,elephant,human,macaque,marmoset,orangutan,panda, antisense antisense A549@0.030329,AG04450@0.066037,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0.0343505,MCF7@0,NHEK@0,NHLF@0.0099845,SKNSHRA@0.0501575, 0 0 0 0 ENSG00000224804.4 ENST00000452986.1 chr7:74855366-74856154 2 427 359 intronic 0.30 0 0,0,0 0 0,0,0 0 0 0 0 0 0 219.934426229508 289.690807799443 0 0 0 chimp,dog,human,marmoset,orangutan,panda, antisense antisense A549@0.030329,AG04450@0.066037,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0.0343505,MCF7@0,NHEK@0,NHLF@0.0099845,SKNSHRA@0.0501575, 0 0 0 0 ENSG00000249595.1 ENST00000458474.2 chr7:74856621-74857439 2 305 511 intronic -9.34 0 0,0,0 0 0,0,0 0 0 0 0 0 2.367 294.377049180328 656 185.029 0 1 chimp,human,marmoset,orangutan, sense_intronic sense_intronic A549@0.025003,AG04450@0,BJ@0,GM12878@0.0194555,H1HESC@0,HELAS3@0.077127,HEPG2@0.0681235,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0.0197565,NHEK@0,NHLF@0,SKNSHRA@0.019757, 0 0 0 0 ENSG00000254977.1 ENST00000448088.1 chr7:74862851-74863847 2 278 716 intronic -3.65 0 0,0,0 0 0,0,0 0 0 34.44 0 6.03351955307263 38.744 0 6.2122905027933 39.247 0 0 chimp,human,orangutan, antisense antisense A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000250614.1 ENST00000479299.2 chr7:76103904-76108173 2 451 3816 intronic -4.95 0 0,0,0 0 0,0,0 0 0 0 0 1.99187631027254 0 0 2.40828092243187 0 0 0 cat,chimp,cow,dog,elephant,horse,human,macaque,marmoset,orangutan,panda, antisense antisense A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0.011875, 166 2 108 2 ENSG00000231183.3 ENST00000472463.1 chr7:76531808-76540535 2 734 7991 intronic -3.64 1 0,0,0 0 0,1,0 0 0 0 97.7929155313352 34.4980603178576 0 104.185286103542 35.2701789513202 2.187 0 0 chimp,cow,dog,elephant,guinea_pig,horse,human,macaque,marmoset,mouse,panda,pig,rabbit, sense_intronic sense_intronic A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000231183.3 ENST00000439318.2 chr7:76540422-76548508 2 347 7737 intronic -5.28 1 0,1,0 0 0,1,0 0 2.90034897246995 0 285.827089337176 27.589375727026 91.301 286.890489913545 33.8301667312912 80.242 0 0 chimp,elephant,guinea_pig,horse,human,macaque,marmoset,orangutan,panda,pig,rabbit, sense_intronic sense_intronic A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000225703.1 ENST00000434531.1 chr7:76601996-76606278 2 451 3829 intronic -5.06 0 0,0,0 0 0,0,0 0 0 0 0 0.84199529903369 0 0 0.879341864716636 0 0 0 cat,chimp,cow,dog,elephant,horse,human,macaque,marmoset,orangutan,panda, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 166 2 108 2 ENSG00000250990.1 ENST00000476561.2 chr7:76875657-76887440 4 566 11211 intronic 0 0 0,0,0 0 0,0,0 12.1855123674912 10.1936490946392 22.848 0 10.005441084649 28.477 0 11.3703505485684 34.021 1 1 chimp,human,macaque,marmoset,orangutan, antisense antisense A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0.0072195,HUVEC@0,K562@0.0181815,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0.0048785, 0 0 0 0 ENSG00000214293.4 ENST00000440088.1 chr7:77286977-77325582 2 2027 36576 intergenic 2.46 1 1,1,1 1 0,0,0 0 1.42686461067367 114.788 5.88554514060187 3.498687664042 276.824 6.02318697582634 4.30432524059493 267.843 0 0 chimp,human,macaque,marmoset,orangutan, lincRNA processed_transcript A549@3.24406,AG04450@2.48506,BJ@1.62099,GM12878@1.67746,H1HESC@2.02262,HELAS3@3.72083,HEPG2@4.86311,HMEC@1.24317,HSMM@0.896151,HUVEC@1.0274,K562@5.94259,MCF7@2.57891,NHEK@1.43025,NHLF@1.91749,SKNSHRA@4.28706, 0 0 0 0 ENSG00000214293.4 ENST00000430801.1 chr7:77288410-77325582 4 579 36587 intergenic 0 0 1,1,1 1 0,0,0 0 1.42643561920901 114.788 3.26424870466321 3.51649492989313 276.824 3.20379965457686 4.33047257222511 267.843 0 0 chimp,cow,human,macaque,marmoset,orangutan,panda, lincRNA processed_transcript A549@3.24406,AG04450@2.48506,BJ@1.62099,GM12878@1.67746,H1HESC@2.02262,HELAS3@3.72083,HEPG2@4.86311,HMEC@1.24317,HSMM@0.896151,HUVEC@1.0274,K562@5.94259,MCF7@2.57891,NHEK@1.43025,NHLF@1.91749,SKNSHRA@4.28706, 0 0 0 0 ENSG00000214293.4 ENST00000416650.1 chr7:77313260-77325579 3 606 11709 intergenic 6.54 0 0,1,1 1 0,0,0 0 3.08958920488513 114.788 6.66831683168317 2.96831497138953 276.824 20.0214521452145 4.15629003330771 267.843 0 0 cat,chimp,cow,dog,elephant,human,macaque,marmoset,orangutan,panda, lincRNA processed_transcript A549@3.24406,AG04450@2.48506,BJ@1.62099,GM12878@1.67746,H1HESC@2.02262,HELAS3@3.72083,HEPG2@4.86311,HMEC@1.24317,HSMM@0.896151,HUVEC@1.0274,K562@5.94259,MCF7@2.57891,NHEK@1.43025,NHLF@1.91749,SKNSHRA@4.28706, 0 0 0 0 ENSG00000214293.4 ENST00000398043.2 chr7:77313538-77325582 3 525 11515 intergenic -5.57 0 0,1,1 1 0,0,0 0 3.14164133738602 114.788 4.91428571428571 2.95840208423795 276.824 15.6285714285714 4.13912288319583 267.843 0 0 cat,chimp,cow,human,macaque,marmoset,orangutan,panda,rabbit, lincRNA processed_transcript A549@3.24406,AG04450@2.48506,BJ@1.62099,GM12878@1.67746,H1HESC@2.02262,HELAS3@3.72083,HEPG2@4.86311,HMEC@1.24317,HSMM@0.896151,HUVEC@1.0274,K562@5.94259,MCF7@2.57891,NHEK@1.43025,NHLF@1.91749,SKNSHRA@4.28706, 0 0 0 0 ENSG00000214293.4 ENST00000447009.1 chr7:77314102-77325570 2 900 10566 intergenic -5.57 0 0,1,0 1 0,0,0 0 3.42381222790081 114.788 4.75 2.47766420594359 278.714 6.13555555555556 3.64205943592656 269.698 0 0 chimp,cow,human,macaque,marmoset,panda, lincRNA processed_transcript A549@3.24406,AG04450@2.48506,BJ@1.62099,GM12878@1.67746,H1HESC@2.02262,HELAS3@3.72083,HEPG2@4.86311,HMEC@1.24317,HSMM@0.896151,HUVEC@1.0274,K562@5.94259,MCF7@2.57891,NHEK@1.43025,NHLF@1.91749,SKNSHRA@4.28706, 0 0 0 0 ENSG00000232756.1 ENST00000431722.1 chr7:77619701-77624259 3 561 3993 intergenic 1.09 0 0,0,0 0 0,0,0 0 0 0 0 7.89957425494616 0 0 14.1334835962935 0 0 0 chimp,human,macaque,marmoset,orangutan, antisense antisense A549@0.0093755,AG04450@0.013893,BJ@0,GM12878@0.0089295,H1HESC@0.0855985,HELAS3@0,HEPG2@0,HMEC@0.004168,HSMM@0.002094,HUVEC@0.0035575,K562@0.117819,MCF7@0.001023,NHEK@0,NHLF@0,SKNSHRA@0.020929, 0 0 0 0 ENSG00000232756.1 ENST00000454234.1 chr7:77619734-77621940 2 1963 241 intergenic 0.70 0 0,0,0 0 0,0,0 0 0 0 16.0687722873153 0 0 28.7493632195619 0 0 0 0 chimp,human,macaque,marmoset,orangutan, antisense antisense A549@0.0093755,AG04450@0.013893,BJ@0,GM12878@0.0089295,H1HESC@0.0855985,HELAS3@0,HEPG2@0,HMEC@0.004168,HSMM@0.002094,HUVEC@0.0035575,K562@0.117819,MCF7@0.001023,NHEK@0,NHLF@0,SKNSHRA@0.020929, 0 0 0 0 ENSG00000232756.1 ENST00000438324.1 chr7:77619737-77624488 2 556 4193 intergenic 2.36 0 0,0,1 0 0,0,0 0 0 0 0 7.52277605533031 0 0 13.4593369902218 0 0 0 chimp,human,macaque,orangutan, antisense antisense A549@0.0093755,AG04450@0.013893,BJ@0,GM12878@0.0089295,H1HESC@0.0855985,HELAS3@0,HEPG2@0,HMEC@0.004168,HSMM@0.002094,HUVEC@0.0035575,K562@0.117819,MCF7@0.001023,NHEK@0,NHLF@0,SKNSHRA@0.020929, 0 0 0 0 ENSG00000235751.3 ENST00000440555.2 chr7:78530591-78629614 4 570 98447 intronic -2.68 0 0,0,0 0 0,0,0 0 9.30794234461182 0 5.87017543859649 15.934523144433 3.825 10.1701754385965 17.1295620994037 7.343 0 0 cat,chimp,cow,dog,elephant,guinea_pig,horse,human,macaque,marmoset,mouse,orangutan,panda,pig,rabbit,rat, sense_intronic sense_intronic A549@0,AG04450@0,BJ@0.0194835,GM12878@0,H1HESC@0,HELAS3@0.0103505,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0.0122765, 0 0 0 0 ENSG00000251276.1 ENST00000428298.1 chr7:78569166-78570211 2 470 573 intronic -2.86 0 0,0,0 0 0,0,0 19.6765957446809 8.06980802792321 2.992 3.55957446808511 5.29842931937173 1.434 3.85744680851064 7.93019197207679 0 0 0 cat,chimp,cow,dog,elephant,horse,human,macaque,marmoset,mouse,orangutan,panda,pig,rabbit,rat, antisense antisense A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000226978.1 ENST00000411616.1 chr7:78638304-78641593 3 473 2812 intronic 1.42 1 0,0,1 0 0,0,0 0 0 0 35.816067653277 1.87055476529161 3.51 39.8414376321353 5.13904694167852 8.312 0 0 chimp,cow,dog,elephant,horse,human,macaque,marmoset,orangutan,panda,rabbit,rat, antisense antisense A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000234456.2 ENST00000429408.1 chr7:79082198-79089022 3 631 6189 exonic 5.14 0 1,1,1 1 0,0,0 199.02852614897 72.2213604782679 56.229 230.778129952456 61.8466634351268 68.675 242.050713153724 52.285829697851 55.389 0 0 chimp,human,macaque,marmoset,orangutan, antisense antisense A549@0.818485,AG04450@15.3941,BJ@11.1129,GM12878@0.000968,H1HESC@0.355403,HELAS3@1.22435,HEPG2@7.96477,HMEC@1.45892,HSMM@4.84159,HUVEC@9.35961,K562@0.002726,MCF7@0,NHEK@0.763266,NHLF@19.0585,SKNSHRA@13.5094, 0 0 0 0 ENSG00000234456.2 ENST00000426835.1 chr7:79082427-79100516 4 734 17349 exonic 3.89 1 1,1,1 1 0,0,0 58.7465940054496 26.7322612254309 138.157 79.8910081743869 25.3593290679578 154.923 85.3405994550409 22.7950890541242 144.7 0 0 chimp,cow,dog,elephant,human,macaque,marmoset,opossum,orangutan,panda,pig,rabbit,rat, antisense antisense A549@0.818485,AG04450@15.3941,BJ@11.1129,GM12878@0.000968,H1HESC@0.355403,HELAS3@1.22435,HEPG2@7.96477,HMEC@1.45892,HSMM@4.84159,HUVEC@9.35961,K562@0.002726,MCF7@0,NHEK@0.763266,NHLF@19.0585,SKNSHRA@13.5094, 0 0 0 0 ENSG00000234456.2 ENST00000446159.1 chr7:79082474-79100512 4 666 17366 exonic 1.46 1 1,1,1 1 0,0,0 78.8813813813814 24.6463203961764 163.49 69.5990990990991 24.0011516756881 189.374 57.1546546546547 22.0397328112404 178.461 0 0 chimp,cow,dog,elephant,human,macaque,marmoset,mouse,orangutan,panda,pig,rabbit, antisense antisense A549@0.818485,AG04450@15.3941,BJ@11.1129,GM12878@0.000968,H1HESC@0.355403,HELAS3@1.22435,HEPG2@7.96477,HMEC@1.45892,HSMM@4.84159,HUVEC@9.35961,K562@0.002726,MCF7@0,NHEK@0.763266,NHLF@19.0585,SKNSHRA@13.5094, 0 0 0 0 ENSG00000234456.2 ENST00000414797.1 chr7:79083276-79100524 5 1067 16173 intergenic 3.89 1 1,1,1 1 0,0,0 60.8219306466729 1.03876831756631 507.157 39.8163074039363 4.77969455264948 456.75 25.7357075913777 6.31441291040623 406.741 0 0 chimp,human,macaque,orangutan,panda,pig,rat, antisense antisense A549@0.818485,AG04450@15.3941,BJ@11.1129,GM12878@0.000968,H1HESC@0.355403,HELAS3@1.22435,HEPG2@7.96477,HMEC@1.45892,HSMM@4.84159,HUVEC@9.35961,K562@0.002726,MCF7@0,NHEK@0.763266,NHLF@19.0585,SKNSHRA@13.5094, 0 0 0 0 ENSG00000234456.2 ENST00000422093.1 chr7:79083308-79089085 4 758 5013 intergenic -1.81 0 1,1,1 1 0,0,0 64.0435356200528 0 506.261 35.1926121372032 4.01196888090963 472.558 16.5540897097625 6.03391182924397 420.924 0 0 chimp,human,macaque,marmoset,orangutan,panda,pig, antisense antisense A549@0.818485,AG04450@15.3941,BJ@11.1129,GM12878@0.000968,H1HESC@0.355403,HELAS3@1.22435,HEPG2@7.96477,HMEC@1.45892,HSMM@4.84159,HUVEC@9.35961,K562@0.002726,MCF7@0,NHEK@0.763266,NHLF@19.0585,SKNSHRA@13.5094, 0 0 0 0 ENSG00000234456.2 ENST00000451809.1 chr7:79083326-79089028 4 703 4993 intergenic -1.81 0 1,1,1 1 0,0,0 55.9701280227596 0 505.757 25.2972972972973 4.02803925495694 478.518 9.23186344238976 6.05808131383938 426.476 0 0 chimp,human,macaque,marmoset,orangutan,panda,pig, antisense antisense A549@0.818485,AG04450@15.3941,BJ@11.1129,GM12878@0.000968,H1HESC@0.355403,HELAS3@1.22435,HEPG2@7.96477,HMEC@1.45892,HSMM@4.84159,HUVEC@9.35961,K562@0.002726,MCF7@0,NHEK@0.763266,NHLF@19.0585,SKNSHRA@13.5094, 0 0 0 0 ENSG00000234456.2 ENST00000448195.1 chr7:79083328-79100364 4 770 16260 intergenic 1.46 0 1,1,1 1 0,0,0 49.7727272727273 1.03321033210332 505.701 21.812987012987 4.75412054120541 478.04 8.42857142857143 6.28062730627306 426.233 0 0 chimp,human,macaque,marmoset,orangutan,panda,pig, antisense antisense A549@0.818485,AG04450@15.3941,BJ@11.1129,GM12878@0.000968,H1HESC@0.355403,HELAS3@1.22435,HEPG2@7.96477,HMEC@1.45892,HSMM@4.84159,HUVEC@9.35961,K562@0.002726,MCF7@0,NHEK@0.763266,NHLF@19.0585,SKNSHRA@13.5094, 0 0 0 0 ENSG00000234456.2 ENST00000424477.1 chr7:79083331-79088941 4 516 5088 intergenic -2.62 0 1,1,1 1 0,0,0 71.3023255813954 0 505.617 29.6782945736434 3.95283018867925 477.323 12.577519379845 5.94496855345912 426.233 0 0 chimp,human,macaque,marmoset,orangutan,panda, antisense antisense A549@0.818485,AG04450@15.3941,BJ@11.1129,GM12878@0.000968,H1HESC@0.355403,HELAS3@1.22435,HEPG2@7.96477,HMEC@1.45892,HSMM@4.84159,HUVEC@9.35961,K562@0.002726,MCF7@0,NHEK@0.763266,NHLF@19.0585,SKNSHRA@13.5094, 0 0 0 0 ENSG00000234456.2 ENST00000435749.1 chr7:79084149-79088256 2 267 3838 intergenic 0 0 0,0,1 1 0,0,0 0 0 130.305 0 5.2402292860865 76.188 0 7.51380927566441 55.908 0 0 chimp,cow,elephant,human,macaque,marmoset,orangutan,panda,pig, antisense retained_intron A549@0.818485,AG04450@15.3941,BJ@11.1129,GM12878@0.000968,H1HESC@0.355403,HELAS3@1.22435,HEPG2@7.96477,HMEC@1.45892,HSMM@4.84159,HUVEC@9.35961,K562@0.002726,MCF7@0,NHEK@0.763266,NHLF@19.0585,SKNSHRA@13.5094, 0 0 0 0 ENSG00000234456.2 ENST00000448636.1 chr7:79087967-79089155 3 534 650 intergenic -1.81 0 0,0,1 0 0,0,0 0 0 0 0 0 0 0 0 0 0 0 cat,chimp,cow,human,macaque,marmoset,orangutan,panda, antisense antisense A549@0.818485,AG04450@15.3941,BJ@11.1129,GM12878@0.000968,H1HESC@0.355403,HELAS3@1.22435,HEPG2@7.96477,HMEC@1.45892,HSMM@4.84159,HUVEC@9.35961,K562@0.002726,MCF7@0,NHEK@0.763266,NHLF@19.0585,SKNSHRA@13.5094, 0 0 0 0 ENSG00000234456.2 ENST00000452320.1 chr7:79088021-79093061 2 4503 535 intergenic -0.74 1 0,0,0 0 0,0,0 0 0 0 1.16766600044415 0 0 1.89229402620475 0 0 0 0 chimp,cow,dog,guinea_pig,human,orangutan,rabbit, antisense retained_intron A549@0.818485,AG04450@15.3941,BJ@11.1129,GM12878@0.000968,H1HESC@0.355403,HELAS3@1.22435,HEPG2@7.96477,HMEC@1.45892,HSMM@4.84159,HUVEC@9.35961,K562@0.002726,MCF7@0,NHEK@0.763266,NHLF@19.0585,SKNSHRA@13.5094, 0 0 0 0 ENSG00000234456.2 ENST00000442765.1 chr7:79099743-79100524 2 677 102 intergenic 0.52 1 0,0,1 0 0,0,0 0 0 16.8 0 0 37.348 0 0 46.504 0 0 cat,chimp,dog,horse,human,macaque,mouse,orangutan,panda,pig,rabbit, antisense retained_intron A549@0.818485,AG04450@15.3941,BJ@11.1129,GM12878@0.000968,H1HESC@0.355403,HELAS3@1.22435,HEPG2@7.96477,HMEC@1.45892,HSMM@4.84159,HUVEC@9.35961,K562@0.002726,MCF7@0,NHEK@0.763266,NHLF@19.0585,SKNSHRA@13.5094, 0 0 0 0 ENSG00000234223.2 ENST00000447198.2 chr7:79875725-79941772 5 573 65466 intergenic -0.50 0 0,0,0 0 0,0,0 0 6.94042709192558 0 0 6.91977515045978 0 2.54450261780105 11.2293556960865 0 0 1 chimp,human,macaque,orangutan, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0.063757,HSMM@0,HUVEC@0,K562@0.004249,MCF7@0,NHEK@0.0898707,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000232667.1 ENST00000437763.1 chr7:80000833-80003755 4 503 2413 intronic -6.03 0 0,0,0 0 0,0,0 0 0 18.403 0 0 0 0 1.14421881475342 0 0 0 chimp,cow,dog,elephant,horse,human,macaque,marmoset,orangutan,panda,pig,rabbit, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000234113.2 ENST00000412900.2 chr7:81157719-81191099 4 608 32766 intergenic -5.45 0 0,0,0 0 0,0,0 44.7927631578947 5.59305377525484 17.733 200.585526315789 10.4319721662699 11.012 188.133223684211 11.4078923274126 15.332 0 0 chimp,cow,dog,elephant,guinea_pig,horse,human,macaque,marmoset,mouse,opossum,orangutan,panda,pig,rabbit,rat, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0.015276,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000233491.2 ENST00000455420.1 chr7:81205702-81255532 9 4354 45460 intergenic 3.40 0 0,0,0 0 0,0,0 42.329352319706 11.0916410030796 0 62.0098759761139 13.9707215134184 0 75.1196600826826 19.6062252529696 0 0 0 chimp,horse,human,macaque,marmoset,orangutan,panda, processed_transcript processed_transcript A549@0.004712,AG04450@0.0200195,BJ@0.0013745,GM12878@0,H1HESC@0.0075845,HELAS3@0.142546,HEPG2@0.008083,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0.0203165,SKNSHRA@0.148048, 0 0 0 0 ENSG00000233491.2 ENST00000413944.2 chr7:81205703-81254542 10 4561 44260 intergenic 3.40 0 0,0,0 0 0,0,0 43.5590620206005 9.85290794884541 53.196 325.446635985097 13.5792851009987 19.886 76.2421652421652 14.5514935152967 253.726 0 0 chimp,horse,human,macaque,marmoset,orangutan, processed_transcript processed_transcript A549@0.004712,AG04450@0.0200195,BJ@0.0013745,GM12878@0,H1HESC@0.0075845,HELAS3@0.142546,HEPG2@0.008083,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0.0203165,SKNSHRA@0.148048, 0 0 0 0 ENSG00000223770.1 ENST00000439234.1 chr7:81638493-81659271 5 2646 18124 intronic 4.00 0 0,0,0 0 0,0,0 0 30.5140697417789 0 0 37.0788457294196 0 1.01020408163265 36.7935886117855 0 0 0 chimp,horse,human,macaque,marmoset,orangutan,pig, antisense antisense A549@0,AG04450@0.0075475,BJ@0,GM12878@0.0032475,H1HESC@0.001098,HELAS3@0.0406225,HEPG2@0.001029,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0.0021875,NHEK@0,NHLF@0.0043835,SKNSHRA@0.0835895, 0 0 0 0 ENSG00000223770.1 ENST00000454066.1 chr7:81638508-81657659 4 936 18209 intronic -0.27 0 0,0,0 0 0,0,0 0 30.371629414026 0 0 36.9057608874732 0 0 36.7686308968093 0 0 0 chimp,human,macaque,marmoset,orangutan, antisense antisense A549@0,AG04450@0.0075475,BJ@0,GM12878@0.0032475,H1HESC@0.001098,HELAS3@0.0406225,HEPG2@0.001029,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0.0021875,NHEK@0,NHLF@0.0043835,SKNSHRA@0.0835895, 0 0 0 0 ENSG00000235503.2 ENST00000430696.2 chr7:82984470-82991582 2 329 6781 intergenic 3.64 1 0,0,0 0 0,0,0 0 2.373598820059 0 0 9.4952802359882 0 0 8.34351032448378 0 0 0 horse,human, antisense antisense A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000235139.2 ENST00000450977.2 chr7:84161792-84204159 3 4101 38262 intergenic 0.94 1 0,1,0 0 0,0,0 20.9556854151449 16.7401453366792 0 33.9985390796202 20.0805886658302 0 37.8972485999513 22.0929265997491 6.565 0 0 chimp,cow,dog,elephant,guinea_pig,horse,human,macaque,marmoset,opossum,orangutan,panda,rabbit, lincRNA lincRNA A549@0.000529,AG04450@0.0254475,BJ@0,GM12878@0.0009825,H1HESC@0,HELAS3@0.0005695,HEPG2@0,HMEC@0,HSMM@0.0005015,HUVEC@0,K562@0.000664,MCF7@0.001002,NHEK@0.000321667,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000235139.2 ENST00000446000.1 chr7:84178522-84213638 3 346 34766 intergenic 0.45 0 0,0,0 0 0,0,0 65.7456647398844 13.9387332451245 130.542 88.6242774566474 17.253494793764 217.579 88.1184971098266 20.1609906230225 222.305 0 0 chimp,cow,dog,elephant,horse,human,macaque,marmoset,orangutan,panda, lincRNA lincRNA A549@0.000529,AG04450@0.0254475,BJ@0,GM12878@0.0009825,H1HESC@0,HELAS3@0.0005695,HEPG2@0,HMEC@0,HSMM@0.0005015,HUVEC@0,K562@0.000664,MCF7@0.001002,NHEK@0.000321667,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000232019.1 ENST00000439105.1 chr7:84568665-84569561 2 780 114 intergenic 13.50 1 1,1,1 0 0,0,0 0 0 0 0 0 0 0 0 0 0 0 chimp,human,macaque,marmoset,orangutan, lincRNA lincRNA A549@0.761594,AG04450@0.400336,BJ@0.621966,GM12878@0.229328,H1HESC@1.53395,HELAS3@2.47659,HEPG2@1.34569,HMEC@0.612623,HSMM@0.659439,HUVEC@4.48862,K562@0.395873,MCF7@2.14877,NHEK@0.378907,NHLF@0.35233,SKNSHRA@0.405772, 0 0 0 0 ENSG00000225128.1 ENST00000438065.1 chr7:85050438-85118609 4 784 67381 intergenic 2.09 1 0,0,0 0 0,0,0 30.5739795918367 11.4495480921922 0 35.1492346938776 14.5133791424882 0 35.5 15.0029236728455 0 0 0 cat,chimp,cow,dog,elephant,guinea_pig,horse,human,macaque,marmoset,orangutan,panda,pig,rabbit,rat, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000225128.1 ENST00000422448.1 chr7:85104543-85118548 2 483 13520 intergenic 2.09 1 0,0,0 0 0,0,0 49.6273291925466 21.6549556213018 0 63.3685300207039 22.8034763313609 1.434 64.5797101449275 22.8169378698225 0 0 0 cat,chimp,cow,dog,elephant,guinea_pig,horse,human,macaque,marmoset,mouse,opossum,orangutan,panda,pig,platypus,rabbit,rat, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000231255.1 ENST00000423979.1 chr7:86404397-86405338 2 267 672 intronic 0 0 0,0,0 0 0,0,0 0 0 0 0 0 0 0 0 0 0 0 chimp,cow,dog,horse,human,macaque,marmoset,orangutan,panda,pig, antisense antisense A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000233073.1 ENST00000452471.1 chr7:86413542-86415908 3 684 1678 exonic 3.68 0 0,0,0 0 0,0,0 178.735380116959 153.030989272944 369.333 103.133040935672 130.19547079857 301.792 116.679824561403 144.471990464839 303.479 0 0 chimp,cow,elephant,horse,human,macaque,marmoset,orangutan,panda,pig,rabbit, antisense antisense A549@0,AG04450@0.007817,BJ@0.0036205,GM12878@0,H1HESC@0.10569,HELAS3@0.003323,HEPG2@0.003167,HMEC@0,HSMM@0,HUVEC@0.058101,K562@0,MCF7@0.0090265,NHEK@0.00563167,NHLF@0,SKNSHRA@0.319226, 0 0 0 0 ENSG00000233073.1 ENST00000418031.1 chr7:86413695-86415986 2 678 1611 exonic 15.26 0 0,0,0 0 0,0,0 399.410029498525 92.5779019242706 316.527 244.377581120944 91.2060831781502 271.955 283.455752212389 98.7380509000621 269.191 0 0 chimp,cow,dog,elephant,guinea_pig,horse,human,macaque,marmoset,mouse,orangutan,panda,pig,rabbit, antisense antisense A549@0,AG04450@0.007817,BJ@0.0036205,GM12878@0,H1HESC@0.10569,HELAS3@0.003323,HEPG2@0.003167,HMEC@0,HSMM@0,HUVEC@0.058101,K562@0,MCF7@0.0090265,NHEK@0.00563167,NHLF@0,SKNSHRA@0.319226, 0 0 0 0 ENSG00000224046.1 ENST00000433446.1 chr7:86780739-86781598 2 767 90 intergenic -1.47 1 1,1,1 1 0,0,0 0 0 289.378 0 0 228.379 0 0 222.627 0 0 chimp,human,macaque,marmoset,orangutan, lincRNA processed_transcript A549@0.413262,AG04450@0.122382,BJ@0.102337,GM12878@0.393026,H1HESC@0.609747,HELAS3@0.447598,HEPG2@0.12533,HMEC@0.157701,HSMM@0.086529,HUVEC@0.108899,K562@0.741117,MCF7@0.680066,NHEK@0.0801117,NHLF@0.0917725,SKNSHRA@0.293756, 0 0 0 0 ENSG00000224046.1 ENST00000446309.1 chr7:86780756-86781736 2 336 642 exonic -10.33 1 1,1,1 1 0,0,0 32.6190476190476 0 277.87 65.3005952380952 0 205.743 64.9345238095238 0 200.128 0 0 chimp,human,macaque,marmoset,orangutan, lincRNA processed_transcript A549@0.413262,AG04450@0.122382,BJ@0.102337,GM12878@0.393026,H1HESC@0.609747,HELAS3@0.447598,HEPG2@0.12533,HMEC@0.157701,HSMM@0.086529,HUVEC@0.108899,K562@0.741117,MCF7@0.680066,NHEK@0.0801117,NHLF@0.0917725,SKNSHRA@0.293756, 0 0 0 0 ENSG00000182165.12 ENST00000359941.5 chr7:86954541-86974831 3 852 19434 intergenic -2.16 0 0,1,0 1 0,0,0 87.0985915492958 4.31588967788412 0 29.2605633802817 8.69090254193681 9.584 31.943661971831 11.22409179788 11.065 0 0 chimp,human,macaque,marmoset, lincRNA processed_transcript A549@4.8125,AG04450@6.62603,BJ@3.97096,GM12878@7.08283,H1HESC@5.98608,HELAS3@1.2594,HEPG2@5.27511,HMEC@7.91582,HSMM@2.1152,HUVEC@8.02428,K562@0.431228,MCF7@7.67945,NHEK@6.07659,NHLF@3.80575,SKNSHRA@9.44691, 0 0 0 0 ENSG00000182165.12 ENST00000416560.1 chr7:86954615-86974831 4 706 19504 intergenic -2.16 0 1,1,1 1 0,0,0 96.385269121813 4.60495283018868 0 35.3116147308782 8.65971082854799 9.584 38.5495750708215 11.1838084495488 11.065 0 0 chimp,human,macaque,marmoset,orangutan,rabbit, lincRNA processed_transcript A549@4.8125,AG04450@6.62603,BJ@3.97096,GM12878@7.08283,H1HESC@5.98608,HELAS3@1.2594,HEPG2@5.27511,HMEC@7.91582,HSMM@2.1152,HUVEC@8.02428,K562@0.431228,MCF7@7.67945,NHEK@6.07659,NHLF@3.80575,SKNSHRA@9.44691, 0 0 0 0 ENSG00000182165.12 ENST00000421293.1 chr7:86954666-86974802 3 436 19696 intergenic -1.01 0 1,1,1 1 0,0,0 156.073394495413 4.56006295694557 0 57.1788990825688 8.57529447603574 9.584 62.4220183486239 11.0747867587327 11.065 0 0 chimp,cow,dog,horse,human,macaque,marmoset,orangutan,panda,rabbit, lincRNA processed_transcript A549@4.8125,AG04450@6.62603,BJ@3.97096,GM12878@7.08283,H1HESC@5.98608,HELAS3@1.2594,HEPG2@5.27511,HMEC@7.91582,HSMM@2.1152,HUVEC@8.02428,K562@0.431228,MCF7@7.67945,NHEK@6.07659,NHLF@3.80575,SKNSHRA@9.44691, 0 0 0 0 ENSG00000182165.12 ENST00000432193.1 chr7:86954666-86974802 3 507 19625 intergenic 0.27 0 1,1,1 1 0,0,0 146.366863905325 4.27388535031847 0 49.1715976331361 8.60631847133758 9.584 53.6804733727811 11.1148535031847 11.065 0 0 chimp,dog,elephant,human,macaque,marmoset,orangutan,rabbit, lincRNA processed_transcript A549@4.8125,AG04450@6.62603,BJ@3.97096,GM12878@7.08283,H1HESC@5.98608,HELAS3@1.2594,HEPG2@5.27511,HMEC@7.91582,HSMM@2.1152,HUVEC@8.02428,K562@0.431228,MCF7@7.67945,NHEK@6.07659,NHLF@3.80575,SKNSHRA@9.44691, 0 0 0 0 ENSG00000182165.12 ENST00000542586.1 chr7:86974513-86974802 2 217 70 intergenic 0 0 0,1,0 1 0,0,0 20.2764976958525 84.8571428571429 0 0 0 9.584 0 0 11.065 0 0 chimp,horse,human,macaque,marmoset,orangutan, lincRNA processed_transcript A549@4.8125,AG04450@6.62603,BJ@3.97096,GM12878@7.08283,H1HESC@5.98608,HELAS3@1.2594,HEPG2@5.27511,HMEC@7.91582,HSMM@2.1152,HUVEC@8.02428,K562@0.431228,MCF7@7.67945,NHEK@6.07659,NHLF@3.80575,SKNSHRA@9.44691, 0 0 0 0 ENSG00000254003.1 ENST00000520993.1 chr7:87845975-87848541 2 574 1990 exonic 0 0 0,0,0 0 0,0,0 32.1951219512195 56.0040201005025 0 61.2526132404181 47.8145728643216 5.145 68.705574912892 49.9236180904523 5.327 0 0 cat,chimp,cow,dog,elephant,horse,human,macaque,marmoset,mouse,orangutan,panda,pig, antisense antisense A549@0.0192475,AG04450@0.0523135,BJ@0.0085485,GM12878@0.566647,H1HESC@0.0051595,HELAS3@0.0178805,HEPG2@0.123127,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0.010659,NHEK@0,NHLF@0,SKNSHRA@3.92412, 0 0 0 0 ENSG00000228747.2 ENST00000447058.2 chr7:87858974-87861089 2 775 1338 intergenic -2.25 0 0,0,0 0 0,0,0 0 0 0 0 0 2.629 0 0 2.761 0 0 chimp,cow,elephant,horse,human,macaque,marmoset,orangutan, antisense antisense A549@0,AG04450@0.00762,BJ@0,GM12878@0.189109,H1HESC@0.0076495,HELAS3@0.0535515,HEPG2@0.028085,HMEC@0,HSMM@0.0105925,HUVEC@0.022128,K562@0,MCF7@0.0105845,NHEK@0,NHLF@0,SKNSHRA@0.550528, 0 0 0 0 ENSG00000228113.1 ENST00000447758.1 chr7:87861326-87921775 3 622 59823 intronic -2.07 0 0,0,0 0 0,0,0 0 9.20990254584357 0 0 10.8963776473931 0 0 11.2875649833676 0 0 0 cat,chimp,dog,elephant,horse,human,macaque,marmoset,orangutan,panda, antisense antisense A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0.013932,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0.0962055, 0 0 0 0 ENSG00000228113.1 ENST00000434733.1 chr7:87906316-87921781 3 523 14938 exonic -1.92 0 0,0,0 0 0,0,0 72.2887189292543 26.5486008836524 0 86.1281070745698 32.2592716561789 2.512 58.3499043977055 32.804257598072 6.181 0 0 cat,chimp,cow,elephant,horse,human,macaque,marmoset,mouse,orangutan,pig,rabbit, antisense antisense A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0.013932,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0.0962055, 0 0 0 0 ENSG00000233420.1 ENST00000444032.1 chr7:88339945-88386039 6 786 45298 intergenic 1.16 0 0,0,0 0 0,0,0 0 9.01437149543026 0 2.67684478371501 12.7736544659808 3.747 2.6972010178117 14.5446377323502 6.579 0 0 chimp,human,macaque,marmoset,orangutan, processed_transcript processed_transcript A549@0,AG04450@0,BJ@0,GM12878@0.0134115,H1HESC@0,HELAS3@0.010053,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000227863.1 ENST00000448260.1 chr7:89073286-89123576 6 667 49613 intergenic -1.56 0 0,0,0 0 0,0,0 0 7.54034224900732 0 0 8.80624029992139 0 0 10.3650656078044 0 0 0 chimp,dog,horse,human,macaque,marmoset,orangutan, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0.0043455,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0.114699,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000227646.3 ENST00000478318.2 chr7:89511667-89840949 3 624 328654 intronic -11.18 0 0,1,0 0 0,0,0 16.5495207667732 6.75803585555542 70.848 21.2460063897764 13.1203309275465 79.917 28.0686900958466 15.0129985516595 69.94 0 0 cat,chimp,cow,human,macaque,marmoset,orangutan,pig, antisense antisense A549@0.0437825,AG04450@0,BJ@0.0095545,GM12878@0.253679,H1HESC@0.0524615,HELAS3@0.059915,HEPG2@0.0468755,HMEC@0,HSMM@0.0036355,HUVEC@0.0308535,K562@0,MCF7@0,NHEK@0.00127033,NHLF@0.003112,SKNSHRA@0.0541835, 0 0 0 0 ENSG00000238358.2 ENST00000471553.1 chr7:89748613-89752204 2 576 3013 intergenic -6.82 0 0,1,1 0 0,0,0 0 0 0 7.52604166666667 4.3468304015931 0 8.5 6.76402256886824 10.692 0 0 chimp,horse,human,macaque,marmoset,orangutan, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0.0034045, 0 0 0 0 ENSG00000227646.3 ENST00000433534.1 chr7:89838584-89840949 2 1003 1360 intronic -9.77 0 0,1,1 0 0,0,0 18.9830508474576 18.9926470588235 70.848 36.6191425722832 21.4301470588235 79.917 41.1186440677966 24.6573529411765 69.94 0 0 cat,chimp,cow,horse,human,marmoset,orangutan,panda,pig, antisense retained_intron A549@0.0437825,AG04450@0,BJ@0.0095545,GM12878@0.253679,H1HESC@0.0524615,HELAS3@0.059915,HEPG2@0.0468755,HMEC@0,HSMM@0.0036355,HUVEC@0.0308535,K562@0,MCF7@0,NHEK@0.00127033,NHLF@0.003112,SKNSHRA@0.0541835, 0 0 0 0 ENSG00000234459.1 ENST00000420245.1 chr7:89895348-89899530 3 286 3892 intronic -1.25 1 0,0,1 0 0,0,0 0 13.3774409044193 0 9.80769230769231 20.1551901336074 7.893 10.1923076923077 21.3743576567318 9.706 0 0 chimp,cow,elephant,guinea_pig,horse,human,macaque,marmoset,orangutan,pig, antisense antisense A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000225498.1 ENST00000445784.1 chr7:89941810-89951906 3 730 9362 intergenic -0.28 1 0,1,1 0 0,0,0 0 20.5725272377697 7.942 0 21.1041444135868 5.244 0 19.9775688955351 7.589 0 0 chimp,human,macaque,marmoset,orangutan, lincRNA lincRNA A549@0.223498,AG04450@0.0430245,BJ@0.0362515,GM12878@0.085703,H1HESC@0.162786,HELAS3@0.268595,HEPG2@0.1359,HMEC@0,HSMM@0.005917,HUVEC@0.217544,K562@0.0917395,MCF7@0.002805,NHEK@0.0242163,NHLF@0,SKNSHRA@0.74629, 0 0 0 0 ENSG00000223969.1 ENST00000415965.1 chr7:90219933-90225062 3 314 4811 intronic 0 0 0,0,1 0 0,0,0 0 24.0006235709832 93.473 21.3248407643312 45.4913739347329 111.66 26.796178343949 41.6834337975473 105.449 0 0 cat,chimp,cow,dog,elephant,guinea_pig,horse,human,macaque,marmoset,mouse,orangutan,panda,pig,rabbit,rat, antisense antisense A549@0,AG04450@0.023811,BJ@0.0380345,GM12878@0.45452,H1HESC@0.020964,HELAS3@1.04882,HEPG2@0,HMEC@0.054608,HSMM@0.0091545,HUVEC@0.0208965,K562@0,MCF7@0.0288745,NHEK@0,NHLF@0.129831,SKNSHRA@0.06539, 0 0 0 0 ENSG00000223969.1 ENST00000441971.1 chr7:90219937-90225204 3 447 4816 intronic 0 1 1,1,1 0 0,0,0 0 23.9757059800664 93.473 14.9798657718121 45.4441445182724 111.66 18.8232662192394 41.640157807309 105.449 0 0 chimp,cow,elephant,horse,human,macaque,marmoset,orangutan, antisense antisense A549@0,AG04450@0.023811,BJ@0.0380345,GM12878@0.45452,H1HESC@0.020964,HELAS3@1.04882,HEPG2@0,HMEC@0.054608,HSMM@0.0091545,HUVEC@0.0208965,K562@0,MCF7@0.0288745,NHEK@0,NHLF@0.129831,SKNSHRA@0.06539, 0 0 0 0 ENSG00000223969.1 ENST00000412669.1 chr7:90219937-90226667 3 446 6280 intronic -6.05 1 1,1,1 0 0,0,0 36.957399103139 36.1656050955414 105.12 50.932735426009 53.7641719745223 124.094 40.0941704035874 50.0957006369427 125.798 0 0 chimp,cow,dog,elephant,guinea_pig,horse,human,macaque,marmoset,mouse,orangutan,panda,pig,rabbit,rat, antisense antisense A549@0,AG04450@0.023811,BJ@0.0380345,GM12878@0.45452,H1HESC@0.020964,HELAS3@1.04882,HEPG2@0,HMEC@0.054608,HSMM@0.0091545,HUVEC@0.0208965,K562@0,MCF7@0.0288745,NHEK@0,NHLF@0.129831,SKNSHRA@0.06539, 0 0 0 0 ENSG00000243144.1 ENST00000449361.1 chr7:90940683-90965056 6 675 23688 intergenic -1.89 0 0,0,1 0 0,0,0 0 16.0338145896657 0 0 16.0311550151976 3.24 11.1051851851852 25.9247720364742 3.264 0 0 chimp,dog,elephant,horse,human,macaque,marmoset,orangutan,panda, lincRNA lincRNA A549@0,AG04450@0.0034585,BJ@0.004752,GM12878@0.006312,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0.003266,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000243144.1 ENST00000419226.1 chr7:90941755-90965037 5 625 22649 intergenic -2.45 0 0,0,1 0 0,0,0 0 16.7693496401607 0 4.528 16.6416177314672 0 4.624 27.2543158638351 1.701 0 0 chimp,elephant,horse,human,macaque,marmoset,orangutan,panda, lincRNA lincRNA A549@0,AG04450@0.0034585,BJ@0.004752,GM12878@0.006312,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0.003266,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000235341.3 ENST00000418395.1 chr7:90941755-91144724 6 483 202476 intergenic 0.22 0 0,0,1 0 0,0,0 17.6190476190476 24.5371846539837 0 49.6977225672878 28.0350066180683 0 49.8219461697723 30.0383502242241 1.701 0 0 chimp,cow,horse,human,macaque,marmoset,mouse,orangutan,pig,rabbit, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0.010371,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000235450.1 ENST00000456952.1 chr7:91010093-91186163 2 200 175868 intergenic -4.14 0 0,1,0 0 0,0,0 0 18.0188721086269 0 17.85 24.6036004275934 31.985 19.875 26.335205949917 42.484 0 0 cat,chimp,cow,dog,elephant,guinea_pig,horse,human,macaque,marmoset,orangutan,panda,pig,rabbit,rat, lincRNA lincRNA A549@0,AG04450@0,BJ@0.0177125,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0.420492,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000223665.1 ENST00000415249.1 chr7:91268162-91272827 2 534 4129 intergenic -3.04 0 0,1,0 0 0,0,0 154.623595505618 11.1036570598208 121.89 216.494382022472 35.6682005328167 680.107 197.303370786517 27.0394768709131 104.881 0 0 chimp,dog,elephant,guinea_pig,horse,human,macaque,marmoset,opossum,orangutan,panda,pig,rabbit,rat, lincRNA lincRNA A549@0.012149,AG04450@0.0110465,BJ@0.0181125,GM12878@0.0099085,H1HESC@0.016404,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0.032969,K562@0.004995,MCF7@0,NHEK@0.0207563,NHLF@0,SKNSHRA@0.0781675, 0 0 0 0 ENSG00000244055.1 ENST00000441539.1 chr7:92119399-92120893 2 393 1099 exonic -2.14 0 0,0,1 0 0,0,0 287.608142493639 0 120.442 315.055979643766 2.82711555959964 92.594 323.557251908397 0 91.454 0 0 cat,chimp,cow,dog,elephant,guinea_pig,horse,human,marmoset,mouse,opossum,orangutan,panda,rabbit,rat, processed_transcript processed_transcript A549@0.452764,AG04450@0.3379,BJ@0.204144,GM12878@1.44105,H1HESC@0.074637,HELAS3@0.537635,HEPG2@0.211861,HMEC@0.123882,HSMM@0.143131,HUVEC@0.0980415,K562@0.384274,MCF7@0.250474,NHEK@0.382174,NHLF@0.11021,SKNSHRA@0.334981, 0 0 0 0 ENSG00000237819.1 ENST00000435695.1 chr7:92465797-92546501 2 430 80272 exonic 0.64 0 1,1,1 1 0,0,0 582 10.6265572055013 193.682 573.641860465116 15.3698799083117 220.944 576.9 16.9296018536974 234.875 0 0 cat,chimp,cow,dog,elephant,guinea_pig,horse,human,macaque,marmoset,mouse,opossum,orangutan,panda,pig,rabbit,rat, antisense antisense A549@0.0381635,AG04450@0.229583,BJ@0.107732,GM12878@0.221241,H1HESC@0.0316645,HELAS3@0.0111035,HEPG2@0.455695,HMEC@0.095648,HSMM@2.00325,HUVEC@0.028399,K562@0.15155,MCF7@0,NHEK@0.173099,NHLF@0.059234,SKNSHRA@0.542871, 0 0 0 0 ENSG00000237819.1 ENST00000452050.1 chr7:92465803-92546437 3 404 80226 exonic 0 0 1,1,1 1 0,0,0 513.381188118812 10.632650263007 192.482 486.346534653465 15.3786926931419 218.718 490.522277227723 16.93930895221 232.223 0 0 cat,chimp,cow,dog,elephant,guinea_pig,horse,human,macaque,marmoset,mouse,orangutan,panda,pig,rabbit,rat, antisense antisense A549@0.0381635,AG04450@0.229583,BJ@0.107732,GM12878@0.221241,H1HESC@0.0316645,HELAS3@0.0111035,HEPG2@0.455695,HMEC@0.095648,HSMM@2.00325,HUVEC@0.028399,K562@0.15155,MCF7@0,NHEK@0.173099,NHLF@0.059234,SKNSHRA@0.542871, 0 0 0 0 ENSG00000237819.1 ENST00000424523.1 chr7:92484223-92546465 2 404 61836 intergenic -5.27 0 0,0,1 0 0,0,0 495.871287128713 5.56536645319878 19.598 538.096534653465 7.68730189533605 28.161 537.967821782178 8.80897858852449 41.128 0 0 cat,chimp,cow,dog,elephant,guinea_pig,horse,human,macaque,marmoset,mouse,opossum,orangutan,panda,pig,rabbit,rat, antisense antisense A549@0.0381635,AG04450@0.229583,BJ@0.107732,GM12878@0.221241,H1HESC@0.0316645,HELAS3@0.0111035,HEPG2@0.455695,HMEC@0.095648,HSMM@2.00325,HUVEC@0.028399,K562@0.15155,MCF7@0,NHEK@0.173099,NHLF@0.059234,SKNSHRA@0.542871, 0 0 0 0 ENSG00000237819.1 ENST00000419668.1 chr7:92484223-92546488 3 524 61737 intergenic 0.64 0 0,0,1 0 0,0,0 410.31679389313 5.57429094384243 19.598 448.095419847328 7.6996290717074 28.161 447.820610687023 8.82310445923838 41.128 0 0 chimp,cow,dog,elephant,human,macaque,marmoset,mouse,opossum,pig,rat, antisense antisense A549@0.0381635,AG04450@0.229583,BJ@0.107732,GM12878@0.221241,H1HESC@0.0316645,HELAS3@0.0111035,HEPG2@0.455695,HMEC@0.095648,HSMM@2.00325,HUVEC@0.028399,K562@0.15155,MCF7@0,NHEK@0.173099,NHLF@0.059234,SKNSHRA@0.542871, 0 0 0 0 ENSG00000234695.1 ENST00000435257.1 chr7:93520225-93522913 2 525 2161 exonic -9.79 0 0,1,0 0 0,0,0 0 0 0 6.82857142857143 0 30.922 7.03428571428571 0.449791763072652 50.563 0 0 chimp,human,macaque,marmoset,orangutan, antisense antisense A549@0.0310065,AG04450@0.004253,BJ@0,GM12878@0,H1HESC@0.009391,HELAS3@0.148457,HEPG2@0.007444,HMEC@0.023309,HSMM@0,HUVEC@0,K562@0.0156565,MCF7@0.160433,NHEK@0.0186887,NHLF@0.0018875,SKNSHRA@0.083892, 0 0 0 0 ENSG00000241247.1 ENST00000424151.1 chr7:93594722-93597702 2 312 2666 intergenic -13.31 0 0,0,1 0 0,0,0 0 0 0 0 1.41635408852213 0 0 1.47524381095274 1.41 0 0 chimp,human,macaque,marmoset,orangutan, processed_transcript processed_transcript A549@0,AG04450@0,BJ@0,GM12878@0.113624,H1HESC@0,HELAS3@0,HEPG2@0.056337,HMEC@0,HSMM@0,HUVEC@0.132376,K562@0.12249,MCF7@0,NHEK@0.0381247,NHLF@0,SKNSHRA@0.061994, 0 0 0 0 ENSG00000236861.2 ENST00000426193.2 chr7:93598754-93629684 4 559 30365 intronic -5.05 0 0,1,0 0 0,0,0 0 4.3807673308085 0 0 9.90564794994237 0 0 14.5400955046929 1.41 0 0 chimp,cow,dog,horse,human,macaque,marmoset,orangutan, antisense antisense A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000236861.2 ENST00000426634.1 chr7:93598760-93640425 4 550 41109 encompassing -1.76 0 0,1,0 0 0,0,0 0 4.89245663966528 0 0 10.017757668637 0 0 13.7628499841884 1.41 0 0 chimp,cow,horse,human,macaque,marmoset, antisense antisense A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000236453.1 ENST00000415536.1 chr7:93652145-93694035 4 635 41249 intergenic -5.19 0 1,1,1 0 0,0,0 0 8.39634900240006 0 0 18.2232054110403 3.107 0 21.2135324492715 7.383 0 0 cat,chimp,dog,elephant,guinea_pig,horse,human,macaque,marmoset,orangutan,panda,pig,rabbit, lincRNA lincRNA A549@0.01317,AG04450@0.0721555,BJ@0.061615,GM12878@1.47859,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0.058505,HSMM@0.0396,HUVEC@0,K562@0.0033055,MCF7@0,NHEK@0,NHLF@0.151224,SKNSHRA@0.010664, 0 0 0 0 ENSG00000236453.1 ENST00000438538.1 chr7:93690453-93695973 5 738 4774 intergenic -0.01 0 0,1,0 0 0,0,0 0 16.120444072057 0 0 19.1837033933808 3.51 0 22.5393799748638 3.614 0 0 cat,chimp,horse,human,macaque,marmoset,orangutan,panda, lincRNA lincRNA A549@0.01317,AG04450@0.0721555,BJ@0.061615,GM12878@1.47859,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0.058505,HSMM@0.0396,HUVEC@0,K562@0.0033055,MCF7@0,NHEK@0,NHLF@0.151224,SKNSHRA@0.010664, 0 0 0 0 ENSG00000236938.1 ENST00000411946.1 chr7:93701071-93706469 3 443 4951 intergenic 4.77 0 0,0,1 0 0,0,0 0 0 0 13.0564334085779 1.31468390224197 153.198 13.5124153498871 1.37043021611796 159.291 0 0 cat,chimp,cow,dog,guinea_pig,horse,human,macaque,marmoset,orangutan,pig,rabbit, lincRNA lincRNA A549@0,AG04450@0,BJ@0.0108515,GM12878@0.0135595,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0.011975,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0.025453, 0 0 0 0 ENSG00000236197.1 ENST00000417881.1 chr7:94784517-94843644 4 2073 57048 intronic 7.46 0 0,0,0 0 0,0,0 0 2.69863974197167 0 0 8.82872318047959 4.063 0 14.9243619408218 4.267 0 0 chimp,human,macaque,orangutan, antisense antisense A549@0.0032475,AG04450@0,BJ@0,GM12878@0,H1HESC@0.001401,HELAS3@0.0102225,HEPG2@0,HMEC@0,HSMM@0.03649,HUVEC@0,K562@0,MCF7@0.0033785,NHEK@0,NHLF@0.0121185,SKNSHRA@0.0073685, 0 0 0 0 ENSG00000233942.1 ENST00000416593.1 chr7:95101147-95103310 2 532 1629 intergenic 0.07 0 0,0,1 0 0,0,0 15.9962406015038 33.1682013505218 0 97.7067669172932 92.841620626151 0 101.050751879699 99.8845917740945 0 0 0 cat,chimp,cow,elephant,horse,human,macaque,marmoset,orangutan,pig,rat, lincRNA lincRNA A549@0.359343,AG04450@0,BJ@0.0067,GM12878@0.453536,H1HESC@0,HELAS3@0.0084625,HEPG2@0.121049,HMEC@0,HSMM@0.025613,HUVEC@0.006545,K562@0,MCF7@0,NHEK@0.0339583,NHLF@0,SKNSHRA@0.004256, 0 0 0 0 ENSG00000231170.1 ENST00000416502.1 chr7:95225994-95236456 2 305 10155 intergenic 0 0 0,1,0 1 0,0,0 0 0.656819300837026 45.288 4.31147540983607 4.75677006400788 72.281 4.34426229508197 5.49217134416544 74.859 0 0 chimp,horse,human,macaque,marmoset,orangutan, antisense antisense A549@0.068773,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0.222008,HEPG2@0.0833575,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000231170.1 ENST00000432265.1 chr7:95225994-95243031 2 769 16266 intergenic -0.33 0 0,1,0 1 0,0,0 0 3.66162547645395 45.288 0 12.1762572236567 72.281 29.2912873862159 12.8215295708841 74.859 0 0 chimp,human,macaque,marmoset,orangutan, antisense antisense A549@0.068773,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0.222008,HEPG2@0.0833575,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000231170.1 ENST00000411728.1 chr7:95239108-95242853 2 556 3187 intergenic -0.33 0 0,0,0 0 0,0,0 0 16.5955443991214 0 0 34.6899905867587 36.394 0 35.0696579855664 36.491 0 0 chimp,human,marmoset,orangutan, antisense antisense A549@0.068773,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0.222008,HEPG2@0.0833575,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000231764.2 ENST00000430027.2 chr7:96594839-96643377 3 4975 43559 encompassing -0.69 1 0,0,1 0 0,0,0 45.2950753768844 110.614729447416 372.416 49.7007035175879 139.215914047614 534.015 47.8580904522613 142.248559425147 556.584 0 1 chimp,human,macaque,orangutan, antisense non_coding A549@0.0039255,AG04450@0,BJ@0.000781,GM12878@0.0006505,H1HESC@0.009245,HELAS3@0.823655,HEPG2@2.85723,HMEC@0,HSMM@0,HUVEC@0,K562@0.0008795,MCF7@0.0006635,NHEK@0.0222457,NHLF@0,SKNSHRA@0.571122, 0 0 0 0 ENSG00000231764.2 ENST00000431497.1 chr7:96596122-96633610 2 3097 34389 intergenic 10.45 0 0,0,1 0 0,0,0 25.2608976428802 62.0229433830585 445.16 34.92799483371 83.5494780307657 574.922 35.6415886341621 86.3386548024078 583.784 0 0 chimp,cow,dog,human,macaque,orangutan,panda, antisense non_coding A549@0.0039255,AG04450@0,BJ@0.000781,GM12878@0.0006505,H1HESC@0.009245,HELAS3@0.823655,HEPG2@2.85723,HMEC@0,HSMM@0,HUVEC@0,K562@0.0008795,MCF7@0.0006635,NHEK@0.0222457,NHLF@0,SKNSHRA@0.571122, 0 0 0 0 ENSG00000231764.2 ENST00000452769.1 chr7:96598048-96643376 2 521 44805 encompassing -2.53 0 0,0,1 0 0,0,0 207.061420345489 107.538600602611 373.12 261.68905950096 135.344403526392 534.855 263.857965451056 138.292712866868 557.434 0 0 cat,chimp,cow,dog,elephant,horse,human,macaque,marmoset,mouse,orangutan,panda,pig, antisense non_coding A549@0.0039255,AG04450@0,BJ@0.000781,GM12878@0.0006505,H1HESC@0.009245,HELAS3@0.823655,HEPG2@2.85723,HMEC@0,HSMM@0,HUVEC@0,K562@0.0008795,MCF7@0.0006635,NHEK@0.0222457,NHLF@0,SKNSHRA@0.571122, 0 0 0 0 ENSG00000231764.2 ENST00000437331.1 chr7:96598110-96643372 3 577 44681 encompassing -2.53 0 0,0,1 0 0,0,0 342.355285961872 105.733421364786 375.936 414.419410745234 133.305566124303 538.215 419.69150779896 136.217654036391 560.834 0 0 cat,chimp,cow,dog,elephant,guinea_pig,horse,human,macaque,marmoset,mouse,orangutan,panda,rabbit, antisense non_coding A549@0.0039255,AG04450@0,BJ@0.000781,GM12878@0.0006505,H1HESC@0.009245,HELAS3@0.823655,HEPG2@2.85723,HMEC@0,HSMM@0,HUVEC@0,K562@0.0008795,MCF7@0.0006635,NHEK@0.0222457,NHLF@0,SKNSHRA@0.571122, 0 0 0 0 ENSG00000231764.2 ENST00000430404.1 chr7:96598386-96641194 3 608 42196 encompassing -2.91 0 0,0,0 0 0,0,0 87.5476973684211 101.392691250355 470.539 111.726973684211 127.476514361551 543.53 112.708881578947 130.441511043701 553.523 0 0 chimp,guinea_pig,human,macaque,marmoset,orangutan, antisense non_coding A549@0.0039255,AG04450@0,BJ@0.000781,GM12878@0.0006505,H1HESC@0.009245,HELAS3@0.823655,HEPG2@2.85723,HMEC@0,HSMM@0,HUVEC@0,K562@0.0008795,MCF7@0.0006635,NHEK@0.0222457,NHLF@0,SKNSHRA@0.571122, 0 0 0 0 ENSG00000231764.2 ENST00000458352.1 chr7:96607780-96643337 3 1701 33852 encompassing -0.69 0 0,0,1 0 0,0,0 254.393885949442 122.841811414392 400.576 293.862433862434 152.892148174406 561.833 298.946502057613 157.460386387806 584.788 0 0 chimp,human,macaque,marmoset,orangutan, antisense non_coding A549@0.0039255,AG04450@0,BJ@0.000781,GM12878@0.0006505,H1HESC@0.009245,HELAS3@0.823655,HEPG2@2.85723,HMEC@0,HSMM@0,HUVEC@0,K562@0.0008795,MCF7@0.0006635,NHEK@0.0222457,NHLF@0,SKNSHRA@0.571122, 0 0 0 0 ENSG00000231764.2 ENST00000437541.1 chr7:96608393-96641194 2 563 32236 encompassing -6.75 0 0,0,0 0 0,0,0 76.7424511545293 123.538280183646 470.539 88.0817051509769 152.258282665343 543.53 89.7015985790408 157.07699466435 553.523 0 0 cat,chimp,horse,human,macaque,marmoset,orangutan, antisense non_coding A549@0.0039255,AG04450@0,BJ@0.000781,GM12878@0.0006505,H1HESC@0.009245,HELAS3@0.823655,HEPG2@2.85723,HMEC@0,HSMM@0,HUVEC@0,K562@0.0008795,MCF7@0.0006635,NHEK@0.0222457,NHLF@0,SKNSHRA@0.571122, 1 96 0 0 ENSG00000248849.1 ENST00000513631.1 chr7:96635695-96637022 1 1327 0 exonic 10.51 0 0,0,1 0 0,0,0 147.519216277317 0 259.435 106.689525244913 0 222.223 103.356443104748 0 229.226 0 0 chimp,cow,dog,elephant,human,macaque,marmoset,mouse,orangutan,panda,rabbit, antisense antisense A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0.0015215,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0.001466, 0 0 0 0 ENSG00000255056.2 ENST00000491463.3 chr7:97935795-97936761 2 494 470 exonic 2.16 0 0,0,0 0 0,0,0 0 0 0 13.834008097166 0 4.864 17.0910931174089 0 5.654 1 1 chimp,human,macaque,marmoset,orangutan, antisense antisense A549@0.045787,AG04450@0.106033,BJ@0.358325,GM12878@0.041882,H1HESC@0.0819405,HELAS3@0.116486,HEPG2@0.198388,HMEC@0.025591,HSMM@0.692905,HUVEC@0.455545,K562@0.072763,MCF7@0.204591,NHEK@0.0515447,NHLF@0.400801,SKNSHRA@1.50596, 1 96 0 0 ENSG00000255056.2 ENST00000485422.3 chr7:97935834-97937162 2 478 848 exonic 3.46 0 0,0,1 0 0,0,0 95.1778242677824 0 0 86.0941422594142 0 12.012 121.26359832636 0 14.097 0 0 cat,chimp,dog,horse,human,macaque,marmoset,orangutan,panda, antisense antisense A549@0.045787,AG04450@0.106033,BJ@0.358325,GM12878@0.041882,H1HESC@0.0819405,HELAS3@0.116486,HEPG2@0.198388,HMEC@0.025591,HSMM@0.692905,HUVEC@0.455545,K562@0.072763,MCF7@0.204591,NHEK@0.0515447,NHLF@0.400801,SKNSHRA@1.50596, 0 0 0 0 ENSG00000242687.2 ENST00000468960.2 chr7:98630550-98645710 2 544 14614 exonic 6.31 0 0,0,0 0 0,0,0 156.608455882353 22.8935267551663 0 134.698529411765 26.5403722457917 12.88 180.705882352941 34.0791706582729 13.356 0 0 cat,chimp,cow,dog,elephant,guinea_pig,human,macaque,marmoset,mouse,orangutan,pig,platypus,rat, processed_transcript antisense A549@1.16213,AG04450@0.859144,BJ@0.980856,GM12878@0.793851,H1HESC@2.12213,HELAS3@2.53185,HEPG2@1.84417,HMEC@1.21298,HSMM@1.96974,HUVEC@2.2528,K562@0.725686,MCF7@4.28881,NHEK@0.521236,NHLF@0.821162,SKNSHRA@3.48323, 0 0 0 0 ENSG00000242687.2 ENST00000482799.2 chr7:98643206-98645863 2 794 1861 exonic 6.31 0 0,1,1 0 0,0,0 133.343828715365 1.5045674368619 0 121.307304785894 2.52552391187534 0 168.840050377834 3.01450832885545 0 0 0 cat,chimp,cow,dog,elephant,human,macaque,marmoset,orangutan,pig,rat, processed_transcript antisense A549@1.16213,AG04450@0.859144,BJ@0.980856,GM12878@0.793851,H1HESC@2.12213,HELAS3@2.53185,HEPG2@1.84417,HMEC@1.21298,HSMM@1.96974,HUVEC@2.2528,K562@0.725686,MCF7@4.28881,NHEK@0.521236,NHLF@0.821162,SKNSHRA@3.48323, 0 0 0 0 ENSG00000244219.1 ENST00000431679.1 chr7:99195689-99208436 6 1308 11429 intergenic 33.80 0 1,1,1 0 0,0,1 11.0214067278287 0.731472569778633 0 105.779051987768 2.34797445095809 8.679 108.032110091743 2.45664537579841 21.072 0 0 chimp,elephant,human,macaque,marmoset,orangutan, processed_transcript processed_transcript A549@2.19226,AG04450@1.60895,BJ@0.354467,GM12878@0.238842,H1HESC@0.0712865,HELAS3@0.675967,HEPG2@0.324785,HMEC@0.02959,HSMM@0.637024,HUVEC@0.0264235,K562@0.187854,MCF7@0,NHEK@0.376972,NHLF@0.824998,SKNSHRA@2.7698, 0 0 0 0 ENSG00000244219.1 ENST00000453227.1 chr7:99195902-99208385 6 1035 11438 intergenic 33.80 0 1,1,1 0 0,0,1 13.9285024154589 0.730897009966777 0 133.680193236715 2.34612694527015 8.679 136.527536231884 2.4547123623011 9.372 0 0 cat,chimp,cow,elephant,human,macaque,marmoset,orangutan,panda, processed_transcript processed_transcript A549@2.19226,AG04450@1.60895,BJ@0.354467,GM12878@0.238842,H1HESC@0.0712865,HELAS3@0.675967,HEPG2@0.324785,HMEC@0.02959,HSMM@0.637024,HUVEC@0.0264235,K562@0.187854,MCF7@0,NHEK@0.376972,NHLF@0.824998,SKNSHRA@2.7698, 0 0 0 0 ENSG00000244219.1 ENST00000429679.1 chr7:99195908-99203182 4 478 6790 intergenic 1.96 0 0,1,0 0 0,0,1 0 1.23122238586156 0 112.299163179916 2.26877761413844 8.679 110.987447698745 2.4179675994109 9.372 0 0 chimp,dog,horse,human,macaque,orangutan, processed_transcript processed_transcript A549@2.19226,AG04450@1.60895,BJ@0.354467,GM12878@0.238842,H1HESC@0.0712865,HELAS3@0.675967,HEPG2@0.324785,HMEC@0.02959,HSMM@0.637024,HUVEC@0.0264235,K562@0.187854,MCF7@0,NHEK@0.376972,NHLF@0.824998,SKNSHRA@2.7698, 0 0 0 0 ENSG00000245883.1 ENST00000499990.1 chr7:99517494-99522910 2 4374 1040 exonic 3.07 0 0,0,1 0 0,0,0 0 0 19.516 0.93278463648834 275.292307692308 62.5 0.947416552354824 280.107692307692 125.749 0 1 chimp,human,macaque,orangutan, lincRNA lincRNA A549@0.044613,AG04450@0.075916,BJ@0.044519,GM12878@0.185354,H1HESC@0,HELAS3@0.097053,HEPG2@0.088328,HMEC@0.016843,HSMM@0.026622,HUVEC@0.0433295,K562@0.159837,MCF7@0.107633,NHEK@0.036801,NHLF@0.031876,SKNSHRA@0.110099, 0 0 0 0 ENSG00000237640.1 ENST00000456499.1 chr7:99527015-99546243 3 677 18547 exonic -2.14 0 0,1,0 1 0,0,0 0 1.09004151614816 37.023 61.7651403249631 4.66609155119426 91.641 170.193500738552 4.93664743624306 146.449 0 0 chimp,cow,dog,guinea_pig,horse,human,marmoset,mouse,orangutan,rabbit, antisense antisense A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0.0779715,HELAS3@0,HEPG2@0.016974,HMEC@0,HSMM@0,HUVEC@0.0035755,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0.010021, 0 0 0 0 ENSG00000242798.1 ENST00000494221.1 chr7:99712837-99724762 2 570 11353 exonic -1.03 0 0,1,0 1 0,0,0 0 23.9046947943275 105.706 0 38.6210693208844 250.646 0 38.6405355412666 211.606 0 0 chimp,human,macaque,marmoset,orangutan,panda, processed_transcript processed_transcript A549@0.119194,AG04450@0.059856,BJ@0.033363,GM12878@0.0070105,H1HESC@0.086269,HELAS3@0.0510395,HEPG2@0.036056,HMEC@0,HSMM@0.078372,HUVEC@0.0500685,K562@0.036541,MCF7@0.244482,NHEK@0.00895867,NHLF@0.144331,SKNSHRA@0.14956, 1 96 0 0 ENSG00000235077.1 ENST00000376482.3 chr7:99728587-99738062 2 340 9133 intergenic 0 0 0,1,0 0 0,0,0 0 2.09569692324537 0 0 3.05365159312384 0 335.5 52.397350268258 0 0 0 chimp,cow,dog,elephant,guinea_pig,horse,human,macaque,marmoset,mouse,opossum,orangutan,rabbit,rat, antisense antisense A549@0.114974,AG04450@0.0911955,BJ@0.124924,GM12878@0.044717,H1HESC@0.0314985,HELAS3@0.824582,HEPG2@0.540776,HMEC@0,HSMM@0,HUVEC@0.0071095,K562@0.180981,MCF7@0.498376,NHEK@0.111714,NHLF@0,SKNSHRA@0.065728, 0 0 0 0 ENSG00000241357.1 ENST00000492523.1 chr7:100032880-100034133 2 331 920 exonic -1.29 0 1,1,1 0 0,0,0 99.7764350453172 95.3271739130435 0 174.060422960725 194.373913043478 0 123.924471299094 176.245652173913 0 0 0 cat,chimp,cow,dog,elephant,guinea_pig,horse,human,macaque,marmoset,mouse,orangutan,rabbit,rat, antisense antisense A549@0,AG04450@0.009683,BJ@0.0204625,GM12878@0.056312,H1HESC@0,HELAS3@0.026339,HEPG2@0.0455895,HMEC@0,HSMM@0,HUVEC@0.0614105,K562@0.014348,MCF7@0,NHEK@0.007798,NHLF@0,SKNSHRA@0.065279, 0 0 0 0 ENSG00000240211.1 ENST00000475250.1 chr7:100033827-100036127 2 301 1997 exonic 0 0 0,1,0 0 0,0,0 0 0 121.064 66.9335548172757 2.20681021532298 212.372 65.9102990033223 2.42563845768653 178.834 0 0 cat,chimp,cow,horse,human,macaque,marmoset,panda,pig,rabbit, antisense antisense A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0.0132705,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000225807.1 ENST00000392471.2 chr7:100107340-100117549 5 565 9636 intergenic -3.82 0 0,0,0 0 0,0,0 0 3.97042341220423 0 16.9469026548673 8.91905354919053 15.045 17.2725663716814 9.07108758821088 15.635 0 0 chimp,dog,human,marmoset,orangutan,pig,rabbit, lincRNA lincRNA A549@0.0096915,AG04450@0.003932,BJ@0.0043195,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0.215525,MCF7@0.0070545,NHEK@0,NHLF@0,SKNSHRA@0.009757, 0 0 0 0 ENSG00000224729.4 ENST00000442166.2 chr7:100187025-100201661 9 2528 12092 exonic 8.50 0 0,0,1 1 0,0,0 163.846914556962 29.9913992722461 222.073 255.699762658228 61.7103870327489 328.259 434.198971518987 92.5416804498842 268.033 0 0 cow,dog,horse,human,marmoset,panda, antisense antisense A549@0.0088245,AG04450@0.097913,BJ@0.0994765,GM12878@0.000924,H1HESC@1.08092,HELAS3@0.013781,HEPG2@0.0299595,HMEC@0,HSMM@0,HUVEC@0.001173,K562@0.072391,MCF7@0.0142275,NHEK@0.00104067,NHLF@0.097409,SKNSHRA@0.716326, 0 0 0 0 ENSG00000224729.4 ENST00000544873.1 chr7:100190490-100200658 8 1172 8982 exonic -3.46 0 0,1,0 1 0,0,0 72.3336177474403 26.8973502560677 133.577 122.913822525597 71.3758628367847 155.053 127.283276450512 112.028612781118 160.748 0 0 chimp,dog,guinea_pig,horse,human,marmoset,orangutan,panda,rabbit, antisense antisense A549@0.0088245,AG04450@0.097913,BJ@0.0994765,GM12878@0.000924,H1HESC@1.08092,HELAS3@0.013781,HEPG2@0.0299595,HMEC@0,HSMM@0,HUVEC@0.001173,K562@0.072391,MCF7@0.0142275,NHEK@0.00104067,NHLF@0.097409,SKNSHRA@0.716326, 0 0 0 0 ENSG00000224729.4 ENST00000446022.1 chr7:100200537-100201829 2 454 836 exonic -5.47 0 0,1,1 1 0,0,0 270.645374449339 97.7141148325359 231.373 258.533039647577 121.083732057416 371.941 268.257709251101 133.898325358852 820.693 0 0 cat,chimp,cow,dog,elephant,guinea_pig,horse,human,macaque,marmoset,orangutan,panda,rabbit, antisense antisense A549@0.0088245,AG04450@0.097913,BJ@0.0994765,GM12878@0.000924,H1HESC@1.08092,HELAS3@0.013781,HEPG2@0.0299595,HMEC@0,HSMM@0,HUVEC@0.001173,K562@0.072391,MCF7@0.0142275,NHEK@0.00104067,NHLF@0.097409,SKNSHRA@0.716326, 0 0 0 0 ENSG00000236305.1 ENST00000412754.1 chr7:100434936-100450238 2 367 14933 intergenic 10.62 0 1,1,1 1 0,0,0 0 0 0 87.5286103542234 0.91481952722159 32.664 86.8964577656676 32.3513024844305 53.101 0 0 cat,chimp,cow,dog,horse,human,macaque,marmoset,mouse,orangutan,panda,pig,rabbit, antisense antisense A549@0.112937,AG04450@0.0063825,BJ@0.006558,GM12878@0.0454375,H1HESC@0.627228,HELAS3@0.142408,HEPG2@0.176746,HMEC@0.355089,HSMM@0.018533,HUVEC@0.0607795,K562@0.097662,MCF7@0.215702,NHEK@0.216107,NHLF@0.0474725,SKNSHRA@0.110814, 0 0 0 0 ENSG00000225946.1 ENST00000438198.1 chr7:100606878-100609286 2 1950 456 exonic 3.01 1 0,1,1 0 0,0,0 1.65128205128205 14.6271929824561 0 15.5753846153846 23.8859649122807 32.016 76.1441025641026 26.4649122807018 403.699 0 0 chimp,human,macaque,orangutan,panda, antisense retained_intron A549@0.0431445,AG04450@0,BJ@0,GM12878@0.0022335,H1HESC@0.386495,HELAS3@0,HEPG2@0.0090055,HMEC@0.004195,HSMM@0,HUVEC@0,K562@0.0127995,MCF7@0.0087625,NHEK@0.00303867,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000225946.1 ENST00000420080.1 chr7:100606878-100611410 6 2077 2445 exonic 3.01 1 0,1,1 0 0,0,0 1.55031295137217 2.7280163599182 0 24.6316803081367 10.3108384458078 0 51.3832450649976 53.9811860940695 0 0 0 chimp,human,macaque,orangutan,panda,rabbit, antisense antisense A549@0.0431445,AG04450@0,BJ@0,GM12878@0.0022335,H1HESC@0.386495,HELAS3@0,HEPG2@0.0090055,HMEC@0.004195,HSMM@0,HUVEC@0,K562@0.0127995,MCF7@0.0087625,NHEK@0.00303867,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000225946.1 ENST00000434775.1 chr7:100606879-100607847 2 510 456 exonic -1.57 1 0,0,1 0 0,0,0 6.31372549019608 14.6271929824561 0 19.0686274509804 23.8859649122807 13.269 21.1274509803922 26.4649122807018 58.881 0 0 chimp,human,macaque,marmoset,orangutan,panda, antisense antisense A549@0.0431445,AG04450@0,BJ@0,GM12878@0.0022335,H1HESC@0.386495,HELAS3@0,HEPG2@0.0090055,HMEC@0.004195,HSMM@0,HUVEC@0,K562@0.0127995,MCF7@0.0087625,NHEK@0.00303867,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000227053.1 ENST00000441882.1 chr7:100657601-100660889 3 404 2880 exonic -1.13 1 1,1,1 1 0,0,0 0 0 0 0 1.30451388888889 0 0 1.33159722222222 164.54 0 0 chimp,human,marmoset, antisense antisense A549@0.505591,AG04450@1.089,BJ@0.635088,GM12878@0.692059,H1HESC@0.813704,HELAS3@0,HEPG2@0,HMEC@0.171029,HSMM@0.62212,HUVEC@0.006536,K562@0.088951,MCF7@0.099579,NHEK@0.22574,NHLF@0.921048,SKNSHRA@0.0055745, 0 0 0 0 ENSG00000227053.1 ENST00000448513.1 chr7:100657606-100660882 3 369 2903 exonic -1.48 1 1,1,1 1 0,0,0 0 0 0 0 1.29417843610059 0 0 1.32104719255942 164.54 0 0 chimp,human,macaque,marmoset, antisense antisense A549@0.505591,AG04450@1.089,BJ@0.635088,GM12878@0.692059,H1HESC@0.813704,HELAS3@0,HEPG2@0,HMEC@0.171029,HSMM@0.62212,HUVEC@0.006536,K562@0.088951,MCF7@0.099579,NHEK@0.22574,NHLF@0.921048,SKNSHRA@0.0055745, 0 0 0 0 ENSG00000232301.1 ENST00000429254.1 chr7:100942894-100944551 2 754 901 intergenic 0.55 0 0,1,0 1 0,0,0 0 0 0 0 0 0 0 0 0 0 0 chimp,human,macaque,orangutan, antisense antisense A549@0.0057425,AG04450@0,BJ@0,GM12878@0,H1HESC@12.4433,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 119 2 0 0 ENSG00000232445.1 ENST00000419422.1 chr7:100951627-100954266 2 703 1934 intergenic 2.38 0 0,1,0 1 0,0,0 0 0 0 0 0 0 0 0 0 0 0 chimp,human,macaque,marmoset,orangutan, antisense antisense A549@3.01752,AG04450@0.127279,BJ@0.038956,GM12878@0.820806,H1HESC@5.46818,HELAS3@5.63734,HEPG2@1.59052,HMEC@3.01883,HSMM@0.005837,HUVEC@0.059044,K562@1.70477,MCF7@2.26399,NHEK@2.23054,NHLF@0.102372,SKNSHRA@0.204421, 119 2 0 0 ENSG00000233123.1 ENST00000451953.1 chr7:101206059-101212251 3 576 5612 intergenic 3.42 0 0,0,0 0 0,0,0 0 17.0586243763364 0 0 22.0703848895225 0 0 23.7425160370634 0 0 0 chimp,human,macaque,orangutan, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0.0016665,HELAS3@0.0034755,HEPG2@0.0073475,HMEC@0,HSMM@0.0051305,HUVEC@0,K562@0,MCF7@0.0013845,NHEK@0,NHLF@0,SKNSHRA@0.0015305, 0 0 0 0 ENSG00000233123.1 ENST00000437900.1 chr7:101208586-101212286 2 1483 2215 intergenic 4.41 1 0,0,0 0 0,0,0 21.1072151045179 25.9313769751693 0 37.4848280512475 27.7986455981941 0 37.4679703304113 32.0817155756208 0 0 0 chimp,dog,horse,human,macaque,orangutan, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0.0016665,HELAS3@0.0034755,HEPG2@0.0073475,HMEC@0,HSMM@0.0051305,HUVEC@0,K562@0,MCF7@0.0013845,NHEK@0,NHLF@0,SKNSHRA@0.0015305, 0 0 0 0 ENSG00000233123.1 ENST00000434537.1 chr7:101208597-101212256 2 2289 1368 intergenic 4.68 1 0,0,0 0 0,0,0 27.525120139799 15.953216374269 0 31.2769768457842 28.9108187134503 0 32.4539100043687 33.8969298245614 0 0 0 chimp,human,macaque,orangutan, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0.0016665,HELAS3@0.0034755,HEPG2@0.0073475,HMEC@0,HSMM@0.0051305,HUVEC@0,K562@0,MCF7@0.0013845,NHEK@0,NHLF@0,SKNSHRA@0.0015305, 0 0 0 0 ENSG00000239480.1 ENST00000468165.1 chr7:102067265-102075227 3 538 7420 intronic -1.44 0 0,1,1 0 0,0,0 0 5.80121293800539 0 0 9.96347708894879 0 28.5055762081784 15.361590296496 92.103 0 0 chimp,human,macaque,marmoset,orangutan, antisense antisense A549@0.0057375,AG04450@0,BJ@0.008946,GM12878@0.0240365,H1HESC@0.0274435,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0.005501,K562@0,MCF7@0.007601,NHEK@0,NHLF@0,SKNSHRA@0.103647, 0 0 0 0 ENSG00000230257.1 ENST00000420058.1 chr7:102613969-102629303 4 1068 14260 intronic 2.78 1 1,1,1 0 0,0,0 0 2.05827489481066 0 1.34269662921348 3.58001402524544 0 1.36516853932584 4.74116409537167 0 0 0 chimp,dog,horse,human,macaque,marmoset,orangutan,panda,pig, lincRNA processed_transcript A549@0.019879,AG04450@0.022804,BJ@0,GM12878@0,H1HESC@0.0309235,HELAS3@0.061159,HEPG2@0,HMEC@0,HSMM@0.04612,HUVEC@1.35297,K562@15.7016,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0.033904, 0 0 0 0 ENSG00000236226.1 ENST00000447336.1 chr7:102670551-102671801 2 331 917 intronic -2.73 0 0,0,1 0 0,0,0 0 0 25.7 0 0 34.618 0 0 34.384 0 0 chimp,human,macaque,marmoset,orangutan,panda, antisense antisense A549@0,AG04450@0.0134615,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0.008937,K562@0.31079,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000234715.1 ENST00000422488.1 chr7:103085654-103154454 4 2721 66073 exonic 2.40 1 0,0,1 0 0,0,0 0 41.7543777337188 92.169 11.0554943035649 42.5349083589363 65.611 12.8250643145902 45.0221119065276 62.495 0 0 chimp,human, lincRNA processed_transcript A549@0,AG04450@0,BJ@0.005989,GM12878@0,H1HESC@0.005885,HELAS3@0.005146,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0.016315,NHEK@0,NHLF@0,SKNSHRA@0.005001, 0 0 0 0 ENSG00000226869.2 ENST00000433514.1 chr7:104379044-104398195 4 744 18401 intronic 3.09 1 0,0,0 0 0,0,0 0 10.2078691375469 0 0 15.4473126460518 5.244 0 14.4706809412532 5.491 0 0 chimp,cow,elephant,human,macaque,marmoset,orangutan, antisense antisense A549@0.0037895,AG04450@0,BJ@0.0032915,GM12878@0.0513525,H1HESC@0.003308,HELAS3@0.0131815,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0.011781,K562@0.008388,MCF7@0.0027485,NHEK@0,NHLF@0,SKNSHRA@0.0125685, 0 0 0 0 ENSG00000226869.2 ENST00000449764.1 chr7:104379045-104444535 7 1189 64289 intronic 4.49 1 0,0,0 0 0,0,0 0 14.2492028185226 0 1.49705634987384 20.4212540247943 0 4.05887300252313 21.4011106099022 0 0 0 chimp,cow,human,macaque,marmoset,orangutan, antisense antisense A549@0.0037895,AG04450@0,BJ@0.0032915,GM12878@0.0513525,H1HESC@0.003308,HELAS3@0.0131815,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0.011781,K562@0.008388,MCF7@0.0027485,NHEK@0,NHLF@0,SKNSHRA@0.0125685, 0 0 0 0 ENSG00000226869.2 ENST00000411448.1 chr7:104409116-104444533 4 852 34559 intronic 0.82 1 0,0,1 0 0,0,0 0 17.5549350386296 0 6.84272300469484 25.5277930495674 0 10.3298122065728 27.6358112213895 0 0 0 chimp,cow,human,marmoset,orangutan,pig, antisense antisense A549@0.0037895,AG04450@0,BJ@0.0032915,GM12878@0.0513525,H1HESC@0.003308,HELAS3@0.0131815,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0.011781,K562@0.008388,MCF7@0.0027485,NHEK@0,NHLF@0,SKNSHRA@0.0125685, 0 0 0 0 ENSG00000226869.2 ENST00000416376.2 chr7:104425659-104444554 7 859 18024 intronic 5.59 0 0,0,0 0 0,0,0 0 17.8298108392966 0 2.07943925233645 28.0607976923504 0 5.63785046728972 30.0022188938814 0 0 0 cat,chimp,cow,human,marmoset,mouse,orangutan,rat, antisense antisense A549@0.0037895,AG04450@0,BJ@0.0032915,GM12878@0.0513525,H1HESC@0.003308,HELAS3@0.0131815,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0.011781,K562@0.008388,MCF7@0.0027485,NHEK@0,NHLF@0,SKNSHRA@0.0125685, 0 0 0 0 ENSG00000226869.2 ENST00000417290.2 chr7:104436953-104444531 4 946 6626 intronic 0.82 1 0,0,0 0 0,0,0 0 8.43852768139991 0 1.88759278897137 5.06712928043445 0 5.11770943796394 5.65756524362649 0 0 0 chimp,elephant,horse,human,marmoset,orangutan,rat, antisense antisense A549@0.0037895,AG04450@0,BJ@0.0032915,GM12878@0.0513525,H1HESC@0.003308,HELAS3@0.0131815,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0.011781,K562@0.008388,MCF7@0.0027485,NHEK@0,NHLF@0,SKNSHRA@0.0125685, 0 0 0 0 ENSG00000226869.2 ENST00000434579.2 chr7:104436963-104444554 5 1029 6554 intronic 0.82 1 0,0,0 0 0,0,0 0 8.53118804331249 0 1.73489278752437 5.12276955924966 0 4.7037037037037 5.71968888211072 0 0 0 chimp,human,marmoset,orangutan,rabbit, antisense antisense A549@0.0037895,AG04450@0,BJ@0.0032915,GM12878@0.0513525,H1HESC@0.003308,HELAS3@0.0131815,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0.011781,K562@0.008388,MCF7@0.0027485,NHEK@0,NHLF@0,SKNSHRA@0.0125685, 0 0 0 0 ENSG00000226869.2 ENST00000450896.1 chr7:104439840-104443986 3 887 3255 intronic -2.01 0 0,0,0 0 0,0,0 0 0 0 31.8399098083427 0 239 36.5467869222097 0.58494623655914 259 0 0 chimp,elephant,human,marmoset,orangutan,panda,rabbit, antisense retained_intron A549@0.0037895,AG04450@0,BJ@0.0032915,GM12878@0.0513525,H1HESC@0.003308,HELAS3@0.0131815,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0.011781,K562@0.008388,MCF7@0.0027485,NHEK@0,NHLF@0,SKNSHRA@0.0125685, 0 0 0 0 ENSG00000225329.1 ENST00000453666.1 chr7:104558007-104567077 3 637 8429 intergenic 2.51 0 0,0,1 0 0,0,0 0 1.72914936528651 27.44 0 5.52449875430063 1.981 0 5.55771740419979 6.977 0 0 chimp,cow,dog,elephant,guinea_pig,horse,human,macaque,marmoset,orangutan, lincRNA lincRNA A549@0.0429975,AG04450@0.0116295,BJ@0.0342275,GM12878@1.71711,H1HESC@0,HELAS3@0.014122,HEPG2@0.0332905,HMEC@0.038387,HSMM@0.14162,HUVEC@0.0362675,K562@0,MCF7@0.309842,NHEK@0.00199467,NHLF@0.069647,SKNSHRA@0.0512555, 0 0 0 0 ENSG00000237513.1 ENST00000415513.1 chr7:104581510-104602507 2 683 20312 intergenic 5.09 0 0,0,0 0 0,0,0 0 11.4670638046475 0 0 7.78918865695155 0 0 9.09511618747539 0 0 0 chimp,human,marmoset,orangutan, lincRNA processed_transcript A549@0.0040325,AG04450@0,BJ@0,GM12878@0.0072985,H1HESC@0.0042485,HELAS3@0.0163075,HEPG2@0.0266125,HMEC@0.102201,HSMM@0,HUVEC@0.0081865,K562@0.0280455,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0.0270665, 0 0 0 0 ENSG00000237513.1 ENST00000417026.1 chr7:104581653-104602781 2 889 20237 intergenic 6.95 0 0,0,1 0 0,0,0 0 11.509561693927 0 0 7.81805603597371 0 0 9.12882344220982 0 0 0 chimp,horse,human,macaque, lincRNA processed_transcript A549@0.0040325,AG04450@0,BJ@0,GM12878@0.0072985,H1HESC@0.0042485,HELAS3@0.0163075,HEPG2@0.0266125,HMEC@0.102201,HSMM@0,HUVEC@0.0081865,K562@0.0280455,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0.0270665, 0 0 0 0 ENSG00000228393.3 ENST00000450686.1 chr7:104590762-104653491 3 535 62190 intergenic 3.83 0 0,1,0 1 0,0,0 76.2018691588785 14.9841775205017 115.98 104.710280373832 12.4470011255829 200.439 106.528971962617 17.3982955459077 239.622 0 0 cat,chimp,dog,elephant,guinea_pig,horse,human,macaque,marmoset,mouse,opossum,orangutan,pig,rabbit,rat, antisense antisense A549@0.205348,AG04450@0.141115,BJ@0.074886,GM12878@0.488651,H1HESC@0.0799955,HELAS3@0.299436,HEPG2@0.241023,HMEC@0.035813,HSMM@0.137959,HUVEC@0.0997635,K562@0.861116,MCF7@0.706043,NHEK@0.163274,NHLF@0.100549,SKNSHRA@0.353587, 0 0 0 0 ENSG00000228393.3 ENST00000445184.1 chr7:104622546-104653471 2 684 30239 intergenic -6.63 0 1,1,1 1 0,0,0 48.9590643274854 8.67684116538245 123.26 69.5614035087719 9.55177089189457 208.879 69.7558479532164 17.3692582426668 248.902 0 0 cat,chimp,cow,dog,elephant,guinea_pig,human,macaque,marmoset,mouse,opossum,orangutan,pig,rabbit,rat, antisense antisense A549@0.205348,AG04450@0.141115,BJ@0.074886,GM12878@0.488651,H1HESC@0.0799955,HELAS3@0.299436,HEPG2@0.241023,HMEC@0.035813,HSMM@0.137959,HUVEC@0.0997635,K562@0.861116,MCF7@0.706043,NHEK@0.163274,NHLF@0.100549,SKNSHRA@0.353587, 0 0 0 0 ENSG00000239569.1 ENST00000453677.1 chr7:104653872-104654768 2 734 160 exonic 11.52 0 0,1,1 0 0,0,0 216.313351498638 134.53125 276.865 245.576294277929 137.00625 214.512 273.309264305177 204.4625 181.016 0 0 cat,chimp,dog,elephant,horse,human,macaque,marmoset,mouse,orangutan,panda,pig,rabbit,rat, antisense antisense A549@3.02415,AG04450@0.827276,BJ@1.27543,GM12878@4.30146,H1HESC@3.77762,HELAS3@6.04534,HEPG2@6.30644,HMEC@1.6172,HSMM@0.802185,HUVEC@1.79892,K562@3.98062,MCF7@3.48881,NHEK@0.727308,NHLF@0.68758,SKNSHRA@3.90618, 0 0 0 0 ENSG00000242154.1 ENST00000476569.1 chr7:104944724-104947089 2 544 1819 intronic 0 0 0,0,0 0 0,0,0 16.3382352941176 0 34.224 23.5386029411765 4.96261682242991 39.495 28.7058823529412 5.24299065420561 46.336 0 0 cat,chimp,cow,dog,horse,human,macaque,marmoset,orangutan,panda,rabbit, antisense antisense A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000243797.1 ENST00000490856.1 chr7:106012697-106372895 5 570 359620 encompassing -2.01 0 0,0,0 0 0,0,0 0 5.30126800511651 0 0 6.76764640453813 3.468 0 8.56148156387297 5.169 0 0 chimp,elephant,horse,human,macaque,marmoset,mouse,orangutan,pig, processed_transcript processed_transcript A549@0.011848,AG04450@0.044439,BJ@0.290759,GM12878@0.0920895,H1HESC@0.007567,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0.0210565,HUVEC@0,K562@0.02736,MCF7@0,NHEK@0,NHLF@0.038548,SKNSHRA@0.0083625, 0 0 0 0 ENSG00000243797.1 ENST00000475791.1 chr7:106102459-106145285 4 756 42064 intergenic 2.46 0 0,1,0 0 0,0,0 0 2.26478699125143 12.19 0 2.09254944845949 0 2.89285714285714 3.64751331304679 2.82 0 0 chimp,human,macaque,marmoset,orangutan, processed_transcript processed_transcript A549@0.011848,AG04450@0.044439,BJ@0.290759,GM12878@0.0920895,H1HESC@0.007567,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0.0210565,HUVEC@0,K562@0.02736,MCF7@0,NHEK@0,NHLF@0.038548,SKNSHRA@0.0083625, 0 0 0 0 ENSG00000243797.1 ENST00000485282.1 chr7:106114318-106280354 5 538 165490 intergenic -3.53 1 0,0,1 0 0,0,0 0 2.58040364976736 0 0 3.05185207565412 0 4.36802973977695 4.21600700948698 0 0 0 chimp,horse,human,macaque,marmoset,orangutan, processed_transcript processed_transcript A549@0.011848,AG04450@0.044439,BJ@0.290759,GM12878@0.0920895,H1HESC@0.007567,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0.0210565,HUVEC@0,K562@0.02736,MCF7@0,NHEK@0,NHLF@0.038548,SKNSHRA@0.0083625, 0 0 0 0 ENSG00000228742.4 ENST00000490162.2 chr7:106415457-106436010 2 427 20124 intergenic 2.12 0 1,1,1 0 0,0,0 0 2.41671635857682 0 0 4.02181474855893 0 0 7.45642019479229 0 0 1 human,macaque,marmoset, lincRNA lincRNA A549@0.475538,AG04450@0.0069985,BJ@0,GM12878@0,H1HESC@0,HELAS3@0.003473,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0.421013,K562@3.92286,MCF7@0,NHEK@0,NHLF@0.002899,SKNSHRA@0.0092485, 0 0 0 0 ENSG00000228742.4 ENST00000470135.1 chr7:106415522-106421388 4 669 5191 intergenic 2.12 0 1,1,1 0 0,1,0 0 0 0 0 1.0693507994606 0 0 1.12136389905606 0 1 1 chimp,human,macaque,marmoset,orangutan, lincRNA lincRNA A549@0.475538,AG04450@0.0069985,BJ@0,GM12878@0,H1HESC@0,HELAS3@0.003473,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0.421013,K562@3.92286,MCF7@0,NHEK@0,NHLF@0.002899,SKNSHRA@0.0092485, 0 0 0 0 ENSG00000243193.1 ENST00000494849.1 chr7:106717671-106774178 3 339 56164 intronic -0.80 0 0,0,0 0 0,0,0 0 7.1009899579802 0 5.69911504424779 6.53833416423332 0 7.38053097345133 7.40080834698383 2.115 0 0 cat,chimp,cow,dog,elephant,horse,human,macaque,marmoset,orangutan,pig,rabbit, antisense antisense A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0.100304,K562@0.01501,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000233705.1 ENST00000440512.1 chr7:107297075-107302156 2 3685 1394 exonic 1.75 0 0,1,1 0 0,0,0 0 3.15638450502152 30.749 22.3223880597015 18.7388809182209 49.634 23.6518317503392 19.3185078909613 49.314 0 0 chimp,human,macaque,marmoset,orangutan,panda, lincRNA processed_transcript A549@0.0095305,AG04450@0.004956,BJ@0,GM12878@0,H1HESC@0.009031,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0.0006185,HUVEC@0.0521375,K562@0.0013325,MCF7@0.0105145,NHEK@0,NHLF@0.008432,SKNSHRA@0.0383645, 0 0 0 0 ENSG00000233705.1 ENST00000449741.1 chr7:107301746-107302596 2 584 264 exonic 2.61 0 0,0,0 0 0,0,0 24.4263698630137 61.2386363636364 0 104.693493150685 89.9128787878788 60.044 89.5102739726027 90.125 59.912 0 0 cat,chimp,cow,dog,horse,human,macaque,marmoset,mouse,orangutan,panda,rabbit,rat, lincRNA processed_transcript A549@0.0095305,AG04450@0.004956,BJ@0,GM12878@0,H1HESC@0.009031,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0.0006185,HUVEC@0.0521375,K562@0.0013325,MCF7@0.0105145,NHEK@0,NHLF@0.008432,SKNSHRA@0.0383645, 0 0 0 0 ENSG00000225647.1 ENST00000440208.1 chr7:108238819-108254711 4 661 15225 intergenic -6.63 0 0,0,0 0 0,0,0 35.4009077155824 32.9302463054187 114.246 25.2284417549168 28.0233169129721 98.367 23.5022692889561 32.0936617405583 91.619 0 0 cat,chimp,dog,horse,human,marmoset,orangutan,panda,pig, lincRNA lincRNA A549@0.0140035,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0.013591,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0.0030235,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000229603.1 ENST00000413406.1 chr7:108549510-108592723 4 534 42673 intergenic -4.85 0 0,0,0 0 0,0,0 12.1329588014981 9.36100110139901 9.24 26.6441947565543 16.7566611206149 5.642 34.250936329588 15.7198228387974 7.597 0 0 cat,chimp,cow,dog,elephant,guinea_pig,horse,human,macaque,marmoset,mouse,orangutan,panda,pig,rabbit,rat, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0.0202805,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000230941.1 ENST00000436714.1 chr7:108962377-108966372 2 396 3597 intergenic -5.08 0 0,0,0 0 0,0,0 0 0 0 9.2979797979798 0.597998331943286 0 10.6060606060606 2.41340005560189 0 0 0 chimp,human,macaque,marmoset,orangutan,panda, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000234273.1 ENST00000412410.1 chr7:109162038-109237223 4 384 74795 intergenic -2.13 0 0,1,0 0 0,0,0 0 4.47289257303296 0 0 8.2719032020857 0 0 9.07221070927201 0 0 0 chimp,human,macaque,marmoset,orangutan,panda, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0.383972,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000226965.1 ENST00000435466.1 chr7:110072296-110174811 5 490 102017 intergenic 5.42 0 0,1,1 0 0,0,0 0 8.89737004616878 0 0 11.8061401531117 0 2.97551020408163 13.2461452503014 0 0 0 chimp,human,macaque,marmoset,orangutan, lincRNA lincRNA A549@0.976772,AG04450@0.540703,BJ@0.133622,GM12878@0.848248,H1HESC@0.157983,HELAS3@0.081154,HEPG2@0.339904,HMEC@0.736205,HSMM@0,HUVEC@0,K562@0,MCF7@0.893619,NHEK@0.266736,NHLF@0.039155,SKNSHRA@0.344935, 0 0 0 0 ENSG00000228540.1 ENST00000451832.1 chr7:110364215-110365881 2 555 1109 intronic -4.71 0 0,0,1 0 0,0,0 0 53.4580703336339 28.987 0 67.0279531109107 34.166 0 65.1857529305681 34.384 0 0 cat,chimp,cow,dog,elephant,guinea_pig,horse,human,macaque,marmoset,orangutan,panda,pig,rabbit,rat, sense_intronic sense_intronic A549@0.016084,AG04450@0.0096435,BJ@0.005811,GM12878@0.0136305,H1HESC@0.0042045,HELAS3@0.0049995,HEPG2@0.014223,HMEC@0.001996,HSMM@0.001121,HUVEC@0.001723,K562@0.109302,MCF7@0.0024605,NHEK@0.0163133,NHLF@0.001068,SKNSHRA@0.04669, 0 0 0 0 ENSG00000225572.1 ENST00000452714.1 chr7:111448572-111461829 2 2492 10763 intronic 3.95 1 0,0,0 0 0,0,0 61.8615569823435 19.2408250487782 12.079 35.1865971107544 25.9396079160085 12.686 36.741974317817 27.2634953079996 22.853 0 0 cat,chimp,cow,dog,elephant,horse,human,macaque,marmoset,orangutan,panda,pig,rabbit, antisense antisense A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0.013389,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0.0021415,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000226851.1 ENST00000431064.1 chr7:111968244-112049678 4 557 80871 intronic -4.86 0 0,1,0 0 0,0,0 0 8.21111399636458 0 0 10.4427545102694 0 0 32.4896687316838 0 0 0 cat,chimp,elephant,horse,human,macaque,marmoset,orangutan, processed_transcript processed_transcript A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0.0080555,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0.003665,NHEK@0,NHLF@0,SKNSHRA@0.0040445, 0 0 0 0 ENSG00000226851.1 ENST00000411413.1 chr7:111968312-111990596 3 285 21995 intronic 0 0 0,1,0 0 0,0,0 0 21.7783587178904 0 0 21.4228688338259 35.234 0 25.227415321664 38.832 0 0 chimp,human,macaque,orangutan,pig, processed_transcript processed_transcript A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0.0080555,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0.003665,NHEK@0,NHLF@0,SKNSHRA@0.0040445, 0 0 0 0 ENSG00000223646.1 ENST00000453459.1 chr7:112262433-112348135 8 1180 84508 intergenic -1.60 1 0,1,0 0 0,0,0 119.669491525424 2.84037014247172 0 119.980508474576 2.57800444928291 0 123.345762711864 4.50905239740616 0 0 0 chimp,dog,elephant,horse,human,macaque,marmoset,opossum,orangutan,panda,pig, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0.0024495,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0.050601,HUVEC@0,K562@0.0058635,MCF7@0,NHEK@0,NHLF@0.0032485,SKNSHRA@0.028288, 0 0 0 0 ENSG00000234520.1 ENST00000451962.1 chr7:112594701-112635689 6 681 40297 intergenic 0.83 0 1,1,1 0 0,0,0 0 13.5151748269102 44.758 0 17.6412388018959 24.462 2.85462555066079 19.7068268109289 25.496 0 0 cat,chimp,cow,dog,horse,human,macaque,marmoset,orangutan,panda,pig,rabbit, lincRNA lincRNA A549@0,AG04450@0.0135465,BJ@0.024841,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0.83001,HUVEC@0,K562@0.0491225,MCF7@0,NHEK@0.0500663,NHLF@0.0112975,SKNSHRA@0.0072235, 0 0 0 0 ENSG00000234520.1 ENST00000447785.1 chr7:112613674-112635682 5 542 21458 intergenic 0.14 0 0,1,0 0 0,0,0 0 19.4180259110821 44.758 0 20.363966818902 24.462 0 21.6456799328922 25.496 0 0 chimp,elephant,horse,human,marmoset,orangutan,rabbit, lincRNA lincRNA A549@0,AG04450@0.0135465,BJ@0.024841,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0.83001,HUVEC@0,K562@0.0491225,MCF7@0,NHEK@0.0500663,NHLF@0.0112975,SKNSHRA@0.0072235, 0 0 0 0 ENSG00000225457.1 ENST00000441928.1 chr7:112740718-112786095 3 648 44725 encompassing 1.04 0 0,0,0 0 0,0,0 0 15.048742314142 0 0 16.0241699273337 6.841 3 19.9715148127445 6.965 0 0 cat,chimp,cow,dog,elephant,guinea_pig,horse,human,macaque,marmoset,orangutan,pig,rabbit,rat, antisense antisense A549@0,AG04450@0,BJ@0,GM12878@0.0175185,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0.004268,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000225457.1 ENST00000430610.1 chr7:112785071-112786385 3 541 769 intergenic -1.20 0 0,0,0 0 0,0,0 0 0 14.101 0 8.07542262678804 5.713 11.0609981515712 17.5123537061118 7.719 0 0 cat,chimp,dog,horse,human,macaque,marmoset,orangutan,panda,pig,rabbit, antisense antisense A549@0,AG04450@0,BJ@0,GM12878@0.0175185,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0.004268,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000224595.1 ENST00000415146.1 chr7:114054299-114059930 2 580 5049 exonic -3.16 0 0,0,0 0 0,0,0 715.862068965517 501.372945137651 378.84 827.48275862069 540.888096652803 358.005 841.975862068966 542.527233115468 299.56 0 0 cat,chimp,cow,dog,elephant,horse,human,macaque,marmoset,mouse,opossum,orangutan,panda,platypus,rabbit,rat, antisense antisense A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000233607.1 ENST00000419883.1 chr7:114701591-114871409 6 559 169249 intergenic -2.58 0 0,0,0 0 0,0,0 87.4686940966011 34.7326128957926 155.115 113.942754919499 36.3180402838422 86.632 140.4114490161 38.8608795325231 166.181 0 0 cat,chimp,cow,dog,elephant,guinea_pig,horse,human,macaque,marmoset,mouse,opossum,orangutan,platypus,rabbit,rat, processed_transcript processed_transcript A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000225535.2 ENST00000435981.1 chr7:114719012-114766368 4 1183 46167 intergenic 1.77 1 0,0,0 0 0,0,0 1.45562130177515 31.9520653280482 0 1.46576500422654 36.8252431390387 0 1.52155536770921 39.6976411722659 0 0 0 chimp,horse,human,macaque,marmoset,orangutan, lincRNA lincRNA A549@0.046078,AG04450@0.036102,BJ@0.0349175,GM12878@0.130289,H1HESC@0.076221,HELAS3@0.0540885,HEPG2@0.082701,HMEC@0.031116,HSMM@0.0229735,HUVEC@0.018543,K562@0,MCF7@0,NHEK@0,NHLF@0.0488135,SKNSHRA@0.003318, 0 0 0 0 ENSG00000225535.2 ENST00000419905.1 chr7:114719052-114765845 5 741 46044 intergenic 1.77 0 0,0,0 0 0,0,0 2.32388663967611 32.0374207279993 0 2.34008097165992 36.9236165407002 0 2.42914979757085 39.8036877769091 0 0 0 chimp,human,macaque,marmoset,orangutan, lincRNA lincRNA A549@0.046078,AG04450@0.036102,BJ@0.0349175,GM12878@0.130289,H1HESC@0.076221,HELAS3@0.0540885,HEPG2@0.082701,HMEC@0.031116,HSMM@0.0229735,HUVEC@0.018543,K562@0,MCF7@0,NHEK@0,NHLF@0.0488135,SKNSHRA@0.003318, 0 0 0 0 ENSG00000225535.2 ENST00000467677.1 chr7:114719073-114765997 3 682 46238 intergenic -2.53 0 0,0,1 0 0,0,0 2.52492668621701 31.903001859942 0 2.5425219941349 36.7686967429387 0 2.63929618768328 39.6366841126346 0 0 0 chimp,human,macaque,marmoset,orangutan, lincRNA lincRNA A549@0.046078,AG04450@0.036102,BJ@0.0349175,GM12878@0.130289,H1HESC@0.076221,HELAS3@0.0540885,HEPG2@0.082701,HMEC@0.031116,HSMM@0.0229735,HUVEC@0.018543,K562@0,MCF7@0,NHEK@0,NHLF@0.0488135,SKNSHRA@0.003318, 0 0 0 0 ENSG00000225535.2 ENST00000460471.1 chr7:114758266-114762279 3 781 3228 intergenic -1.34 0 0,0,0 0 0,0,0 0 0 0 0 0 0 0 0.677509293680297 0 0 0 chimp,dog,human,macaque,marmoset,orangutan, lincRNA lincRNA A549@0.046078,AG04450@0.036102,BJ@0.0349175,GM12878@0.130289,H1HESC@0.076221,HELAS3@0.0540885,HEPG2@0.082701,HMEC@0.031116,HSMM@0.0229735,HUVEC@0.018543,K562@0,MCF7@0,NHEK@0,NHLF@0.0488135,SKNSHRA@0.003318, 0 0 0 0 ENSG00000242072.1 ENST00000471672.1 chr7:115287515-115316383 2 735 28131 intergenic 0.03 0 0,0,0 0 0,0,0 137.91156462585 81.9283708364438 163.437 90.2517006802721 95.9142582915645 181.263 81.6571428571429 97.8016778642779 106.586 0 0 chimp,cow,dog,elephant,guinea_pig,horse,human,macaque,marmoset,mouse,opossum,orangutan,pig, lincRNA lincRNA A549@0,AG04450@0.009432,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000240973.1 ENST00000470532.1 chr7:115319399-115322672 2 1255 2016 intergenic 3.11 0 0,0,0 0 0,0,0 632.76812749004 43.3556547619048 0 526.827091633466 37.5580357142857 0 587.15219123506 35.6458333333333 0 0 0 cat,chimp,cow,dog,elephant,guinea_pig,horse,human,macaque,marmoset,mouse,opossum,orangutan,panda,pig,platypus,rabbit,rat, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000243345.1 ENST00000489626.1 chr7:115429783-115431103 3 760 556 intergenic 0 0 0,1,0 0 0,0,0 0 0 0 0 0 0 0 0 0 0 0 chimp,human,orangutan, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000243243.1 ENST00000456289.1 chr7:115877983-115879305 2 583 737 intronic -0.74 0 0,0,1 0 0,0,0 12.6243567753002 5.61736770691995 63.18 0 0 60.845 0 0 60.978 0 0 chimp,human,macaque,marmoset,orangutan, antisense antisense A549@0.182627,AG04450@0.205016,BJ@0.0696975,GM12878@0.0286195,H1HESC@0,HELAS3@0,HEPG2@0.020878,HMEC@0,HSMM@0.317283,HUVEC@3.01161,K562@0.061545,MCF7@0.07617,NHEK@0,NHLF@0.220199,SKNSHRA@0.046716, 148 2 0 0 ENSG00000243243.1 ENST00000444244.1 chr7:115878058-115967950 5 837 89047 intronic -0.03 0 1,1,1 0 0,0,0 14.0143369175627 12.0861455186587 52.11 0 16.7154648668681 66.93 0 17.7253697485597 66.934 0 0 chimp,horse,human,macaque,marmoset,orangutan, antisense antisense A549@0.182627,AG04450@0.205016,BJ@0.0696975,GM12878@0.0286195,H1HESC@0,HELAS3@0,HEPG2@0.020878,HMEC@0,HSMM@0.317283,HUVEC@3.01161,K562@0.061545,MCF7@0.07617,NHEK@0,NHLF@0.220199,SKNSHRA@0.046716, 0 0 0 0 ENSG00000237813.2 ENST00000446355.1 chr7:115878312-116139519 5 511 260688 exonic 1.90 0 0,1,0 1 0,0,0 8.10176125244618 11.7913751304241 155.556 0 14.7290554225741 126.407 0 15.7426732339041 153.345 0 0 macaque,orangutan, antisense antisense A549@0.749907,AG04450@0.154822,BJ@0.194013,GM12878@0.037983,H1HESC@0,HELAS3@0.0059895,HEPG2@0.031106,HMEC@0.102378,HSMM@0.859875,HUVEC@0.270699,K562@0.0947865,MCF7@0.231228,NHEK@0.272292,NHLF@0.128956,SKNSHRA@0.078987, 148 2 0 0 ENSG00000237870.2 ENST00000457033.1 chr7:115915660-115926718 3 1955 9099 intergenic -3.08 1 0,0,1 0 0,0,0 0 0 0 0 6.04505989669194 0 0 7.2277173315749 0 0 0 chimp,human,macaque,marmoset,orangutan, lincRNA lincRNA A549@0.409489,AG04450@0.181644,BJ@0.097038,GM12878@0.0218665,H1HESC@0,HELAS3@0.0023875,HEPG2@0,HMEC@0.021753,HSMM@0.07875,HUVEC@5.14126,K562@0.0470455,MCF7@0.075284,NHEK@0.0720723,NHLF@0.156191,SKNSHRA@0.0426115, 0 0 0 0 ENSG00000237870.2 ENST00000454897.2 chr7:115917057-115926705 4 583 9059 intergenic -6.49 0 0,0,0 0 0,0,0 0 0 0 0 6.07175184898995 0 0 7.25963130588365 0 0 0 chimp,human,orangutan, lincRNA lincRNA A549@0.409489,AG04450@0.181644,BJ@0.097038,GM12878@0.0218665,H1HESC@0,HELAS3@0.0023875,HEPG2@0,HMEC@0.021753,HSMM@0.07875,HUVEC@5.14126,K562@0.0470455,MCF7@0.075284,NHEK@0.0720723,NHLF@0.156191,SKNSHRA@0.0426115, 0 0 0 0 ENSG00000237870.2 ENST00000420594.1 chr7:115917186-115926788 3 418 9180 intergenic 0 0 0,0,0 0 0,0,0 0 0 0 0 5.9917211328976 0 0 7.16394335511983 0 0 0 chimp,human,orangutan, lincRNA lincRNA A549@0.409489,AG04450@0.181644,BJ@0.097038,GM12878@0.0218665,H1HESC@0,HELAS3@0.0023875,HEPG2@0,HMEC@0.021753,HSMM@0.07875,HUVEC@5.14126,K562@0.0470455,MCF7@0.075284,NHEK@0.0720723,NHLF@0.156191,SKNSHRA@0.0426115, 0 0 0 0 ENSG00000237870.2 ENST00000415502.1 chr7:115923895-115926249 2 648 1704 intergenic -6.82 0 0,0,1 0 0,0,0 0 0 0 43.1466049382716 0 0 43.9135802469136 0 0 0 0 chimp,dog,elephant,horse,human,macaque,marmoset,orangutan,panda, lincRNA retained_intron A549@0.409489,AG04450@0.181644,BJ@0.097038,GM12878@0.0218665,H1HESC@0,HELAS3@0.0023875,HEPG2@0,HMEC@0.021753,HSMM@0.07875,HUVEC@5.14126,K562@0.0470455,MCF7@0.075284,NHEK@0.0720723,NHLF@0.156191,SKNSHRA@0.0426115, 0 0 0 0 ENSG00000237813.2 ENST00000413968.1 chr7:116047191-116139600 4 1136 91267 exonic 0.85 0 0,1,0 1 0,0,0 11.830985915493 8.64201737758445 155.556 3.93133802816901 10.3023217592339 128.774 9.75528169014084 11.9795216233688 155.2 0 0 chimp,horse,human,macaque,marmoset,orangutan,rabbit, antisense antisense A549@0.749907,AG04450@0.154822,BJ@0.194013,GM12878@0.037983,H1HESC@0,HELAS3@0.0059895,HEPG2@0.031106,HMEC@0.102378,HSMM@0.859875,HUVEC@0.270699,K562@0.0947865,MCF7@0.231228,NHEK@0.272292,NHLF@0.128956,SKNSHRA@0.078987, 0 0 0 0 ENSG00000237813.2 ENST00000439070.1 chr7:116056171-116105330 3 696 48459 intergenic -4.42 0 0,1,1 0 0,0,0 34.5977011494253 8.41321529540436 0 33.0502873563218 10.48723663303 0 51.6666666666667 11.9192719618647 0 0 0 chimp,cow,dog,elephant,guinea_pig,horse,human,macaque,marmoset,mouse,opossum,orangutan,panda,pig,rabbit,rat, antisense antisense A549@0.749907,AG04450@0.154822,BJ@0.194013,GM12878@0.037983,H1HESC@0,HELAS3@0.0059895,HEPG2@0.031106,HMEC@0.102378,HSMM@0.859875,HUVEC@0.270699,K562@0.0947865,MCF7@0.231228,NHEK@0.272292,NHLF@0.128956,SKNSHRA@0.078987, 0 0 0 0 ENSG00000235427.1 ENST00000452009.1 chr7:116182772-116192023 2 384 8865 intronic 2.49 0 0,0,0 0 0,0,0 0 10.594923857868 0 0 20.3034404963339 0 0 21.8024816694867 0 0 0 chimp,cow,elephant,horse,human,macaque,marmoset,orangutan,panda, antisense antisense A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000243220.1 ENST00000421965.1 chr7:116203648-116211288 2 690 6948 intergenic -1.29 1 0,0,1 0 0,0,0 61.5188405797101 1.20005757052389 0 69.8536231884058 0.603051237766264 23.156 67.5594202898551 10.188831318365 26.508 0 0 chimp,cow,dog,horse,human,macaque,marmoset,mouse,orangutan,panda,pig,rabbit, antisense antisense A549@0.039721,AG04450@0.0106605,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0.0040445,HUVEC@0,K562@0,MCF7@0,NHEK@0.0264863,NHLF@0.002937,SKNSHRA@0.003693, 0 0 0 0 ENSG00000231210.2 ENST00000450063.1 chr7:116211014-116213798 2 467 2315 intergenic 2.41 1 0,0,1 0 0,0,0 109.561027837259 0 0 108.899357601713 16.2561555075594 28.306 105.372591006424 18.9209503239741 46.893 0 0 chimp,dog,horse,human,macaque,marmoset,mouse,orangutan,panda,pig,rabbit, lincRNA lincRNA A549@0.150142,AG04450@0.0517115,BJ@0.0052495,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0.008731,HSMM@0.007194,HUVEC@0.0166775,K562@0,MCF7@0,NHEK@0.211093,NHLF@0.0413335,SKNSHRA@0.077255, 0 0 0 0 ENSG00000231210.2 ENST00000441991.1 chr7:116211206-116254737 3 465 43062 intergenic 2.41 0 0,1,0 0 0,0,0 63.5741935483871 12.0091263759231 28.527 68.8193548387097 16.5321629278714 24.726 66.4387096774194 18.3955691793228 34.935 0 0 chimp,cow,dog,elephant,guinea_pig,horse,human,macaque,marmoset,mouse,orangutan,panda,pig,rabbit, lincRNA lincRNA A549@0.150142,AG04450@0.0517115,BJ@0.0052495,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0.008731,HSMM@0.007194,HUVEC@0.0166775,K562@0,MCF7@0,NHEK@0.211093,NHLF@0.0413335,SKNSHRA@0.077255, 0 0 0 0 ENSG00000231210.2 ENST00000458082.1 chr7:116213539-116254874 3 623 40708 intergenic 2.41 0 0,0,0 0 0,0,0 0 12.7035717795028 28.527 0 16.5636975533065 26.71 0 18.3833153188562 37.194 0 0 chimp,dog,horse,human,marmoset,orangutan,panda, lincRNA lincRNA A549@0.150142,AG04450@0.0517115,BJ@0.0052495,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0.008731,HSMM@0.007194,HUVEC@0.0166775,K562@0,MCF7@0,NHEK@0.211093,NHLF@0.0413335,SKNSHRA@0.077255, 0 0 0 0 ENSG00000227199.1 ENST00000456775.1 chr7:116592500-116594388 1 1888 0 exonic 15.88 1 1,1,1 0 0,0,0 48.4639830508475 0 0 145.333686440678 0 5.424 111.436970338983 0 5.44 0 0 cat,chimp,horse,human, antisense antisense A549@0.169681,AG04450@0.266084,BJ@0.252532,GM12878@0.0985565,H1HESC@0.613336,HELAS3@0.552163,HEPG2@0.453802,HMEC@0.130057,HSMM@0.262246,HUVEC@0.286446,K562@0.566078,MCF7@0.261694,NHEK@0.13409,NHLF@0.318596,SKNSHRA@1.17468, 0 0 0 0 ENSG00000226367.1 ENST00000446784.1 chr7:116712126-116714778 4 1120 1526 intronic 0.04 1 0,0,0 0 0,0,0 9.99375 7.52293577981651 0.861 25.5892857142857 12.3643512450852 0 28.9321428571429 14.4462647444299 0 0 0 cat,chimp,cow,dog,elephant,guinea_pig,horse,human,macaque,marmoset,orangutan,panda,pig,rabbit,rat, antisense antisense A549@0,AG04450@0,BJ@0,GM12878@0.0047285,H1HESC@0,HELAS3@0,HEPG2@0.00782,HMEC@0,HSMM@0.0865455,HUVEC@0,K562@0.002185,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0.0099545, 0 0 0 0 ENSG00000226367.1 ENST00000456577.1 chr7:116712126-116730834 5 1346 17354 exonic 0.04 1 0,0,0 0 0,0,0 0 2.33018324305636 0 21.2927191679049 5.71257347009335 20.276 24.074294205052 8.47677768814106 25.744 0 0 cat,chimp,cow,elephant,guinea_pig,horse,human,macaque,marmoset,orangutan,panda,pig,rat, antisense antisense A549@0,AG04450@0,BJ@0,GM12878@0.0047285,H1HESC@0,HELAS3@0,HEPG2@0.00782,HMEC@0,HSMM@0.0865455,HUVEC@0,K562@0.002185,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0.0099545, 0 0 0 0 ENSG00000226367.1 ENST00000432541.1 chr7:116712481-116785612 5 1274 71849 intronic 0.04 1 0,0,0 0 0,0,0 0 31.6819301590836 0 22.690737833595 31.4072847221256 2.728 26.7158555729984 31.8442288688778 8.327 0 0 cat,chimp,cow,guinea_pig,horse,human,macaque,marmoset,orangutan,pig, antisense antisense A549@0,AG04450@0,BJ@0,GM12878@0.0047285,H1HESC@0,HELAS3@0,HEPG2@0.00782,HMEC@0,HSMM@0.0865455,HUVEC@0,K562@0.002185,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0.0099545, 0 0 0 0 ENSG00000226367.1 ENST00000434993.1 chr7:116752346-116785614 6 912 32346 exonic 0.97 0 0,0,0 0 0,0,0 31.0701754385965 66.1775490014221 0 49.0263157894737 61.7612996970259 2.728 49.4232456140351 60.6852161009089 8.327 0 0 cat,chimp,cow,dog,elephant,horse,human,macaque,marmoset,orangutan,panda,rabbit, antisense antisense A549@0,AG04450@0,BJ@0,GM12878@0.0047285,H1HESC@0,HELAS3@0,HEPG2@0.00782,HMEC@0,HSMM@0.0865455,HUVEC@0,K562@0.002185,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0.0099545, 0 0 0 0 ENSG00000226367.1 ENST00000442719.1 chr7:116752346-116785646 5 841 32451 intronic 0.97 0 0,0,0 0 0,0,0 0 66.8465378570768 0 0 62.9560876398262 2.728 0 61.8970755908909 8.327 0 0 chimp,cow,elephant,guinea_pig,horse,human,macaque,marmoset,orangutan,rabbit, antisense antisense A549@0,AG04450@0,BJ@0,GM12878@0.0047285,H1HESC@0,HELAS3@0,HEPG2@0.00782,HMEC@0,HSMM@0.0865455,HUVEC@0,K562@0.002185,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0.0099545, 0 0 0 0 ENSG00000226367.1 ENST00000433969.1 chr7:116785419-116786534 2 590 523 intronic -0.75 1 0,1,0 0 0,0,0 0 0 0 0 5.21606118546845 0 0 15.9216061185468 0 0 0 chimp,human,orangutan, antisense antisense A549@0,AG04450@0,BJ@0,GM12878@0.0047285,H1HESC@0,HELAS3@0,HEPG2@0.00782,HMEC@0,HSMM@0.0865455,HUVEC@0,K562@0.002185,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0.0099545, 0 0 0 0 ENSG00000238202.1 ENST00000436097.1 chr7:116940915-116962290 2 347 21026 intronic 8.72 1 0,1,0 0 0,0,0 0 105.968848092837 0 0 105.693284504899 5.456 2.70893371757925 104.943926567107 5.522 0 0 chimp,human,macaque,orangutan,panda,rabbit, antisense antisense A549@0,AG04450@0.0184785,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000232661.1 ENST00000441019.1 chr7:117200787-117204730 2 219 3722 intronic 0 0 0,0,0 0 0,0,0 0 0 26.468 49.9269406392694 1.37829124126814 45.445 87.2146118721461 2.81783987103708 53.865 0 0 cat,chimp,cow,elephant,guinea_pig,horse,human,macaque,marmoset,mouse,opossum,orangutan,pig,rabbit,rat, antisense antisense A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000083622.8 ENST00000456270.1 chr7:117244845-117287469 3 373 42247 intronic -1.92 0 0,1,0 0 0,0,0 0 14.3375387601487 0 0 20.8579070703245 0 0 23.3497053045187 70.701 0 0 chimp,human,macaque,marmoset,orangutan,rabbit, antisense antisense A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000227601.1 ENST00000429014.1 chr7:117329767-117356025 2 421 25835 intronic 7.10 0 0,0,0 0 0,0,0 0 26.1018385910586 0 33.8836104513064 19.7660150958003 2.232 42.8266033254157 18.3629959357461 4.203 0 0 cat,chimp,elephant,human,macaque,marmoset,orangutan, antisense antisense A549@0,AG04450@0,BJ@0,GM12878@0.009531,H1HESC@0,HELAS3@0.0648345,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000234826.1 ENST00000427030.1 chr7:117638912-117644099 3 432 4751 intergenic -7.69 0 0,0,0 0 0,0,0 0 21.7840454641128 0 0 16.7939381182909 0 0 18.8358240370448 0 0 0 chimp,horse,human,macaque,marmoset,orangutan, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0.006155,MCF7@0,NHEK@0.0106003,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000225546.1 ENST00000431071.1 chr7:119344610-119547429 3 556 202259 intergenic 3.33 0 0,1,1 0 0,0,0 0 3.62257798169674 0 0 4.50201968762824 0 0 6.18918317602678 0 0 0 chimp,human,macaque,marmoset, lincRNA lincRNA A549@0.01075,AG04450@0,BJ@0,GM12878@0.0182515,H1HESC@0.02465,HELAS3@0.0548805,HEPG2@0.153254,HMEC@0,HSMM@0,HUVEC@0,K562@8.87476,MCF7@0.005197,NHEK@0,NHLF@0,SKNSHRA@0.04292, 0 0 0 0 ENSG00000225546.1 ENST00000426413.1 chr7:119390869-119547429 4 1573 154981 intergenic 3.33 1 0,1,0 0 0,0,0 0 3.28592537149715 0 0 4.93122382743691 0 0 6.646892199689 0 0 0 chimp,cow,dog,elephant,guinea_pig,horse,human,macaque,marmoset,mouse,orangutan,panda,pig,rabbit,rat, lincRNA lincRNA A549@0.01075,AG04450@0,BJ@0,GM12878@0.0182515,H1HESC@0.02465,HELAS3@0.0548805,HEPG2@0.153254,HMEC@0,HSMM@0,HUVEC@0,K562@8.87476,MCF7@0.005197,NHEK@0,NHLF@0,SKNSHRA@0.04292, 0 0 0 0 ENSG00000233417.1 ENST00000456062.1 chr7:119781070-119783050 2 467 1511 intergenic 0.85 1 0,0,1 0 0,0,0 0 0 0 0 0 34.111 0 0 38.067 0 0 chimp,human,orangutan, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000233969.1 ENST00000421825.1 chr7:119808399-119826118 3 748 16967 intergenic 4.78 0 0,0,0 0 0,0,0 0 20.0291153415453 0 0 22.9711204102081 0 0 21.794424471032 0 0 0 chimp,guinea_pig,human,macaque,marmoset,orangutan, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0.0051385,SKNSHRA@0, 0 0 0 0 ENSG00000231295.1 ENST00000450480.1 chr7:120386792-120392568 3 544 5228 intronic -6.67 0 0,0,1 0 0,0,0 0 161.226472838562 0 0 198.78156082632 0 0 181.649961744453 0 0 0 chimp,cow,dog,elephant,guinea_pig,horse,human,macaque,marmoset,orangutan,pig, antisense antisense A549@0,AG04450@0,BJ@0,GM12878@0.0073705,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000227743.1 ENST00000432702.1 chr7:121283388-121290414 3 375 6647 intergenic -0.23 0 0,0,0 0 0,0,0 0 0 0 0 0 0 0 0 0 0 0 chimp,human,macaque,marmoset,orangutan, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0.0120255, 0 0 0 0 ENSG00000234418.1 ENST00000446053.1 chr7:121856401-121858491 3 469 1617 intergenic 0 0 0,0,1 0 0,0,0 0 0 0 0 0 0 0 0 0 0 0 chimp,human,macaque,marmoset,orangutan, lincRNA lincRNA A549@0,AG04450@0.0144865,BJ@0,GM12878@0.009932,H1HESC@0.026213,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0.017038,NHEK@0.005409,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000230316.2 ENST00000428449.1 chr7:121943712-121950131 7 2646 3761 exonic 17.10 0 0,0,1 0 0,0,0 176.071050642479 106.798191970221 142.626 211.831821617536 143.79925551715 203.443 191.509826152683 129.086679074714 197.196 0 0 human,marmoset,mouse,orangutan,panda,rabbit,rat, antisense antisense A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@1.3734,HELAS3@0,HEPG2@0.0072115,HMEC@0,HSMM@0.005073,HUVEC@0,K562@0,MCF7@0.140321,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000230316.2 ENST00000437317.1 chr7:121945004-121945871 2 766 99 intronic 0 0 0,0,0 0 0,0,0 214.215404699739 0 545.87 237.654046997389 0 642.998 214.42819843342 0 533.986 0 0 cat,chimp,cow,elephant,guinea_pig,horse,human,macaque,marmoset,mouse,orangutan,panda,pig,rabbit,rat, antisense antisense A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@1.3734,HELAS3@0,HEPG2@0.0072115,HMEC@0,HSMM@0.005073,HUVEC@0,K562@0,MCF7@0.140321,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000230316.2 ENST00000424404.1 chr7:121946935-121948611 2 677 997 intronic 0 0 0,1,0 0 0,0,0 70.9926144756278 3.3099297893681 0 72.4608567208272 32.518555667001 7.942 92.2112259970458 45.4553660982949 6.838 0 0 cat,chimp,cow,elephant,guinea_pig,horse,human,marmoset,mouse,orangutan,panda,pig,rat, antisense antisense A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@1.3734,HELAS3@0,HEPG2@0.0072115,HMEC@0,HSMM@0.005073,HUVEC@0,K562@0,MCF7@0.140321,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000240499.1 ENST00000482375.1 chr7:121968523-122019000 4 459 50012 intronic 3.81 0 0,0,0 0 0,0,0 0 55.4646484843638 26.985 23.3681917211329 64.2798128449172 11.644 42.5076252723312 65.7138286811166 15.865 0 0 cat,chimp,cow,guinea_pig,human,macaque,marmoset,orangutan,rabbit, antisense antisense A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000228276.1 ENST00000422260.1 chr7:122062056-122067495 2 323 5114 intronic -1.55 0 0,0,0 0 0,0,0 0 7.8578412201799 0 0 28.1388345717638 4.712 0 34.8472819710598 5.035 0 0 cat,chimp,elephant,guinea_pig,horse,human,macaque,marmoset,orangutan,panda, antisense antisense A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000226680.2 ENST00000420146.2 chr7:122709303-122743643 4 501 33833 intergenic -9.01 0 0,0,0 0 0,0,0 0 0.388571935321765 0 0 1.22528008513406 3.156 24.7564356435644 2.24532206095362 13.248 0 0 cat,chimp,elephant,guinea_pig,human,macaque,marmoset,orangutan,platypus,rabbit, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000232524.1 ENST00000419832.1 chr7:123096683-123099910 3 448 2775 exonic 6.47 0 0,0,1 0 0,0,0 87.0736607142857 5.26306306306306 118.698 101.883928571429 4.95927927927928 101.354 110.988839285714 6.06486486486487 87.776 0 0 chimp,elephant,human,macaque,marmoset,mouse,opossum,pig,rabbit, antisense antisense A549@0,AG04450@0,BJ@0,GM12878@0.0044695,H1HESC@0.456213,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0.031936,HUVEC@0,K562@0,MCF7@0.0227945,NHEK@0,NHLF@0.0042785,SKNSHRA@0, 0 0 0 0 ENSG00000230442.1 ENST00000422401.1 chr7:123224913-123264636 4 406 39311 exonic -5.56 0 0,0,0 0 0,0,0 20.0492610837438 10.5113581440309 0 9.99261083743842 14.8016076925034 84.937 12.5492610837438 22.2900460430923 88.287 0 0 cat,chimp,human,macaque,marmoset,orangutan, antisense antisense A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0.00232933,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000230442.1 ENST00000440504.1 chr7:123254215-123265011 5 550 10238 intronic 2.06 0 0,0,0 0 0,0,0 0 16.4947255323305 0 7.17272727272727 36.3484078921664 0 8.29090909090909 35.874877905841 0 0 0 chimp,cow,dog,elephant,guinea_pig,horse,human,macaque,marmoset,orangutan,panda,pig,rabbit, antisense antisense A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0.00232933,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000230442.1 ENST00000418409.1 chr7:123255511-123264777 4 574 8686 exonic 2.34 0 0,1,0 0 0,0,0 0 16.219548699056 0 110.407665505226 27.7251899608566 29.587 107.707317073171 25.7771125949804 36.137 0 0 chimp,cow,dog,guinea_pig,horse,human,macaque,orangutan,panda,pig,rabbit, antisense antisense A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0.00232933,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000230442.1 ENST00000429396.1 chr7:123260036-123264783 3 645 4098 exonic 2.34 0 0,1,1 0 0,0,0 0 0 0 108.153488372093 5.64860907759883 27.265 106.429457364341 7.11200585651537 33.581 0 0 chimp,guinea_pig,horse,human,macaque,marmoset,orangutan,pig, antisense antisense A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0.00232933,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000230442.1 ENST00000451016.1 chr7:123262810-123264739 2 546 1381 exonic 1.86 0 0,1,0 0 0,0,0 0 0 0 128.108058608059 0 38.65 122.150183150183 1.40767559739319 46.416 0 0 cat,chimp,cow,dog,elephant,guinea_pig,horse,human,macaque,orangutan,panda,pig,rabbit, antisense antisense A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0.00232933,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000241345.1 ENST00000472838.1 chr7:123634676-123667713 5 1749 31280 intergenic 4.78 1 0,0,0 0 0,0,0 0.866781017724414 0.183823529411765 52.681 2.63064608347627 1.40287723785166 53.101 11.7295597484277 2.2352621483376 58.204 0 0 chimp,cow,dog,elephant,human,macaque,marmoset,orangutan,panda, antisense antisense A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0.0119375,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000241345.1 ENST00000476892.1 chr7:123634685-123635466 2 570 209 intergenic -0.57 0 0,0,0 0 0,0,0 0 0 54.576 4.84210526315789 0 53.101 11.3771929824561 0 58.204 0 0 chimp,guinea_pig,horse,human,macaque,marmoset,orangutan,panda,rabbit, antisense antisense A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0.0119375,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000242593.1 ENST00000484322.1 chr7:123672259-124035172 9 4301 358596 exonic -0.24 0 0,1,0 0 0,0,0 4.80446407812137 2.63666354337472 153.41 6.99930248779354 4.11651831029906 170.06 11.0813764240874 32.2438426530134 194.242 0 0 chimp,cow,dog,horse,human,macaque,marmoset,mouse,orangutan,pig,rabbit,rat, antisense antisense A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0.00057,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0.0088395, 0 0 0 0 ENSG00000243574.1 ENST00000467017.1 chr7:123914733-123927598 2 648 12215 intergenic 1.66 1 0,0,1 0 0,0,0 0 1.0356119525174 0 0 3.70192386410151 7.045 0 4.92230863692182 18.611 0 0 chimp,horse,human,macaque,marmoset,panda,pig, lincRNA lincRNA A549@0,AG04450@0.0241375,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0.0712775,SKNSHRA@0, 0 0 0 0 ENSG00000242593.1 ENST00000497598.1 chr7:123974348-123993469 3 436 18681 intergenic 0 0 0,1,0 0 0,0,0 13.704128440367 3.75113751940474 0 42.3073394495413 2.98260264439805 0 35.1995412844037 3.2813553878272 0 0 0 chimp,cow,dog,elephant,guinea_pig,horse,human,macaque,marmoset,orangutan, antisense antisense A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0.00057,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0.0088395, 0 0 0 0 ENSG00000241324.1 ENST00000470677.1 chr7:123977434-123989914 3 251 12225 intergenic 0 1 0,0,0 0 0,0,0 0 0 0 0 0.69038854805726 0 0 0.941758691206544 0 0 0 chimp,human,macaque,marmoset,orangutan, lincRNA lincRNA A549@0,AG04450@0.018096,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0.053346,SKNSHRA@0, 0 0 0 0 ENSG00000224897.2 ENST00000429134.1 chr7:124569927-124765961 5 564 195462 exonic 0.75 0 0,1,0 1 0,0,0 0 4.28024884632307 0 26.8031914893617 8.19055366260449 21.327 45.8971631205674 13.9426947437354 26.947 0 0 chimp,horse,human,macaque,marmoset,orangutan, lincRNA processed_transcript A549@0.141292,AG04450@0.149163,BJ@0.24282,GM12878@0.450288,H1HESC@0.35516,HELAS3@0.719596,HEPG2@0.297673,HMEC@0.027751,HSMM@0.027064,HUVEC@0.050824,K562@0.684414,MCF7@0.0799955,NHEK@0.148826,NHLF@0.0538815,SKNSHRA@1.0277, 0 0 0 0 ENSG00000224897.2 ENST00000435452.2 chr7:124569952-124819369 6 2141 247266 exonic 1.88 0 0,1,0 1 0,0,0 0 4.82573827376186 0 7.21858944418496 9.10156268957317 23.879 12.3073330219524 14.186414630398 27.537 0 0 chimp,cow,dog,elephant,horse,human,macaque,marmoset,mouse,orangutan,panda,pig,rabbit,rat, lincRNA processed_transcript A549@0.141292,AG04450@0.149163,BJ@0.24282,GM12878@0.450288,H1HESC@0.35516,HELAS3@0.719596,HEPG2@0.297673,HMEC@0.027751,HSMM@0.027064,HUVEC@0.050824,K562@0.684414,MCF7@0.0799955,NHEK@0.148826,NHLF@0.0538815,SKNSHRA@1.0277, 0 0 0 0 ENSG00000224897.2 ENST00000449642.1 chr7:124569969-124785288 8 3230 212075 exonic 0.75 1 0,1,1 1 0,0,0 15.5517027863777 4.43260167393611 0 19.4207430340557 8.5743675586467 21.844 29.4786377708978 14.0091854296829 22.869 0 0 chimp,cow,dog,elephant,horse,human,macaque,marmoset,mouse,opossum,orangutan,panda,pig,rabbit,rat, lincRNA processed_transcript A549@0.141292,AG04450@0.149163,BJ@0.24282,GM12878@0.450288,H1HESC@0.35516,HELAS3@0.719596,HEPG2@0.297673,HMEC@0.027751,HSMM@0.027064,HUVEC@0.050824,K562@0.684414,MCF7@0.0799955,NHEK@0.148826,NHLF@0.0538815,SKNSHRA@1.0277, 0 0 0 0 ENSG00000224897.2 ENST00000453342.1 chr7:124569975-124784620 11 3241 211384 exonic 4.84 0 0,1,0 1 0,0,0 18.7432891082999 4.15603829996594 0 31.5124961431657 8.17426106043977 19.402 31.2088861462512 13.7055264353026 20.313 0 0 chimp,horse,human,marmoset,orangutan, lincRNA processed_transcript A549@0.141292,AG04450@0.149163,BJ@0.24282,GM12878@0.450288,H1HESC@0.35516,HELAS3@0.719596,HEPG2@0.297673,HMEC@0.027751,HSMM@0.027064,HUVEC@0.050824,K562@0.684414,MCF7@0.0799955,NHEK@0.148826,NHLF@0.0538815,SKNSHRA@1.0277, 0 0 0 0 ENSG00000224897.2 ENST00000415715.1 chr7:124633062-124742104 6 657 108375 intergenic 0.75 0 0,1,1 0 0,0,0 0 6.24206689734717 0 19.1248097412481 11.020678200692 0 35.5403348554034 20.7288858131488 0 0 0 chimp,cow,dog,elephant,horse,human,macaque,marmoset,orangutan,panda,pig, lincRNA processed_transcript A549@0.141292,AG04450@0.149163,BJ@0.24282,GM12878@0.450288,H1HESC@0.35516,HELAS3@0.719596,HEPG2@0.297673,HMEC@0.027751,HSMM@0.027064,HUVEC@0.050824,K562@0.684414,MCF7@0.0799955,NHEK@0.148826,NHLF@0.0538815,SKNSHRA@1.0277, 0 0 0 0 ENSG00000224899.1 ENST00000454957.1 chr7:124791380-124793665 2 598 1685 intergenic -7.69 0 0,0,0 0 0,0,0 0 45.1780415430267 0 4.83277591973244 35.8551928783383 0 5.01672240802676 42.9780415430267 0 0 0 cat,chimp,cow,dog,horse,human,macaque,marmoset,orangutan,panda,pig, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@1.5217,NHEK@0,NHLF@0,SKNSHRA@0.0037815, 0 0 0 0 ENSG00000237764.2 ENST00000424515.2 chr7:124812272-125019375 10 1443 205642 intergenic 1.57 1 0,0,0 0 0,0,0 21.5869715869716 7.29220198208537 0 17.8260568260568 9.63411657151749 0 29.2917532917533 14.7418669337976 0 0 0 chimp,cow,dog,elephant,guinea_pig,horse,human,macaque,marmoset,orangutan,pig,rabbit,rat, processed_transcript processed_transcript A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0.001218,HELAS3@0.0141225,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0.006696,MCF7@0.0043995,NHEK@0,NHLF@0,SKNSHRA@0.007193, 0 0 0 0 ENSG00000219445.2 ENST00000420224.1 chr7:124869633-124904345 5 1913 32791 intergenic 1.55 0 0,0,0 0 0,0,0 32.2007318348144 9.65996767405691 0 21.7673810768427 8.79262602543381 0 22.4495556717198 9.84889146412125 0 0 0 chimp,human,macaque,marmoset,orangutan, lincRNA processed_transcript A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0.234582,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000227869.1 ENST00000453278.1 chr7:125071401-125101665 3 528 29732 intergenic 6.83 0 0,0,0 0 0,0,0 0 0.635678729987892 0 0 3.14338086909727 0 0 4.29234494820395 0 0 0 chimp,cow,dog,elephant,horse,human,macaque,marmoset,orangutan,panda,pig, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0.0088285,H1HESC@0.0059515,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000227869.1 ENST00000458437.1 chr7:125078165-125106455 3 486 27800 intergenic -0.63 0 0,0,0 0 0,0,0 0 2.10859712230216 0 0 3.58111510791367 0 0 5.38967625899281 0 0 0 chimp,cow,dog,elephant,human,macaque,marmoset,orangutan,panda,pig,rabbit, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0.0088285,H1HESC@0.0059515,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000227869.1 ENST00000415896.1 chr7:125078276-125101923 2 463 23182 intergenic -3.78 0 0,0,0 0 0,0,0 0 0 0 0 1.93175739798119 0 0 3.6680614269692 0 0 0 chimp,cow,dog,elephant,guinea_pig,horse,human,macaque,marmoset,orangutan,panda,pig,rabbit, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0.0088285,H1HESC@0.0059515,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000197462.3 ENST00000411856.1 chr7:125557925-125573886 5 832 15121 intergenic 2.51 0 0,0,0 0 0,0,0 0 9.17796442034257 0 0 10.5046623900536 0 0 7.93459427286555 4.617 0 0 human, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@2.49456,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000241921.1 ENST00000488818.1 chr7:126019024-126064239 7 639 44564 intergenic -2.24 1 0,0,0 0 0,0,0 11.7136150234742 15.415671842743 143.712 3.80281690140845 16.7723947581007 91.21 4.07042253521127 15.595862130868 105.208 0 0 cat,chimp,dog,horse,human,macaque,marmoset,orangutan,rabbit, antisense antisense A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000230206.1 ENST00000423518.1 chr7:126720747-126730972 4 361 9858 intronic 0.33 0 0,0,0 0 0,0,0 0 10.364374112396 0 0 29.2167782511666 0 0 32.1891864475553 365.238 0 0 chimp,cow,elephant,horse,human,macaque,marmoset,orangutan, processed_transcript processed_transcript A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0.01419,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000236340.1 ENST00000450061.1 chr7:126855181-126869087 2 786 13118 intronic -5.73 0 0,0,0 0 0,0,0 20.9631043256997 23.2555267571276 40.88 6.08778625954198 25.707501143467 0 8.86259541984733 26.7631498704071 0 0 0 chimp,cow,dog,elephant,guinea_pig,horse,human,macaque,marmoset,mouse,orangutan,panda,pig,rabbit, antisense antisense A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000236340.1 ENST00000413812.1 chr7:126855181-126869975 3 1909 12881 intronic 3.50 1 0,0,0 0 0,0,0 62.2760607647983 23.683409673162 40.88 40.2205343111577 26.1804984085087 0 44.0979570455736 27.2555702197034 0 0 0 chimp,dog,horse,human,marmoset,orangutan,panda,pig,rabbit, antisense antisense A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000224138.1 ENST00000418215.1 chr7:126990182-126991577 2 514 879 intergenic 0.39 0 0,1,0 0 0,0,0 0 18.9931740614334 0 8.92996108949416 11.415244596132 6.061 9.28015564202335 11.8475540386803 9.306 0 0 chimp,cow,dog,elephant,guinea_pig,horse,human,macaque,marmoset,orangutan,panda, antisense antisense A549@0.0084135,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000226770.1 ENST00000448311.1 chr7:127116937-127125858 4 953 7962 intergenic 2.29 1 0,1,0 0 0,0,0 161.481636935992 0 0 126.086044071354 6.06845013815624 2.104 131.756558237146 8.87704094448631 2.12 0 0 chimp,cow,horse,human,macaque,marmoset,orangutan, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0.001334,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000240790.1 ENST00000490314.1 chr7:127284739-127292066 3 492 6831 intergenic 5.60 0 0,1,0 0 0,0,0 45.9268292682927 1.1617625530669 115.032 111.384146341463 2.03074220465525 156.993 116.955284552846 1.95652173913043 144.571 0 0 elephant,guinea_pig,horse,human,macaque,marmoset,mouse,orangutan,pig,rabbit, antisense antisense A549@0.231125,AG04450@0.070463,BJ@0.066954,GM12878@0.276682,H1HESC@0.148342,HELAS3@0.225647,HEPG2@0.167129,HMEC@0,HSMM@0.054486,HUVEC@0.0477585,K562@0.116899,MCF7@0.076432,NHEK@0.0105323,NHLF@0.007796,SKNSHRA@0.071076, 0 0 0 0 ENSG00000242902.1 ENST00000469965.1 chr7:128490216-128502680 4 555 11903 exonic 4.03 0 0,1,1 0 0,0,0 46.1405405405405 105.1104763505 65.876 92.3891891891892 165.275308745694 138.798 70.7981981981982 155.171469377468 152.593 0 0 cat,chimp,cow,dog,guinea_pig,horse,human,macaque,marmoset,mouse,orangutan,panda,pig,platypus,rabbit,rat, antisense antisense A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000135253.8 ENST00000492679.1 chr7:128502505-128520977 10 1901 16553 exonic 89.77 0 0,1,0 0 0,1,1 84.3466596528143 25.8596024889748 0 201.682272488164 45.7353953966048 44.822 238.805365597054 101.8298797801 64.026 0 0 cat,chimp,cow,dog,elephant,guinea_pig,horse,human,macaque,marmoset,mouse,opossum,orangutan,panda,rabbit,rat, antisense retained_intron A549@0.007237,AG04450@0.0064175,BJ@0.001599,GM12878@0.2628,H1HESC@0.503839,HELAS3@0.0515,HEPG2@0.157104,HMEC@0.072655,HSMM@0.0029625,HUVEC@0.0085305,K562@0.018081,MCF7@0.115377,NHEK@0.0193783,NHLF@0.018691,SKNSHRA@0.0072955, 0 0 0 0 ENSG00000135253.8 ENST00000297801.3 chr7:128505029-128550773 36 4213 41461 intronic 27.41 0 0,1,0 0 0,1,1 85.4049370994541 11.6602590386146 20.303 286.65250415381 23.6920961867779 55.011 361.434607168289 46.8801524324063 55.28 0 0 cat,chimp,cow,dog,elephant,guinea_pig,horse,human,macaque,marmoset,mouse,opossum,orangutan,panda,pig,rabbit,rat, antisense antisense A549@0.007237,AG04450@0.0064175,BJ@0.001599,GM12878@0.2628,H1HESC@0.503839,HELAS3@0.0515,HEPG2@0.157104,HMEC@0.072655,HSMM@0.0029625,HUVEC@0.0085305,K562@0.018081,MCF7@0.115377,NHEK@0.0193783,NHLF@0.018691,SKNSHRA@0.0072955, 0 0 0 0 ENSG00000239815.1 ENST00000461420.1 chr7:128506633-128508898 2 429 1834 intergenic 38.00 0 0,0,1 0 0,0,1 175.449883449883 5.61177753544166 57.595 261.51282051282 12.4749182115594 85.063 231.687645687646 9.76172300981461 84.336 0 0 cat,chimp,cow,dog,elephant,guinea_pig,horse,human,macaque,marmoset,mouse,opossum,orangutan,panda,pig,platypus,rabbit,rat, lincRNA lincRNA A549@0.251762,AG04450@0.0652815,BJ@0.111947,GM12878@0.206948,H1HESC@0,HELAS3@0.500138,HEPG2@0.440761,HMEC@0,HSMM@0.210716,HUVEC@0.463449,K562@0.847474,MCF7@0.705193,NHEK@0.0593583,NHLF@0.12083,SKNSHRA@0.850237, 0 0 0 0 ENSG00000135253.8 ENST00000460528.1 chr7:128513869-128519866 4 1878 4113 intergenic 24.45 0 0,1,1 0 0,1,1 17.779552715655 38.0320933625091 84.664 82.6645367412141 57.3712618526623 168.438 101.752928647497 285.93338195964 190.736 0 0 cat,chimp,dog,elephant,horse,human,macaque,marmoset,orangutan,panda, antisense retained_intron A549@0.007237,AG04450@0.0064175,BJ@0.001599,GM12878@0.2628,H1HESC@0.503839,HELAS3@0.0515,HEPG2@0.157104,HMEC@0.072655,HSMM@0.0029625,HUVEC@0.0085305,K562@0.018081,MCF7@0.115377,NHEK@0.0193783,NHLF@0.018691,SKNSHRA@0.0072955, 0 0 0 0 ENSG00000135253.8 ENST00000441244.2 chr7:128516919-128550773 38 4692 29088 intergenic 268.07 1 0,1,1 0 0,1,1 111.055413469736 2.47277227722772 20.303 291.1468456948 10.2109460946095 55.011 356.286871270247 11.5556243124312 55.28 0 0 cat,chimp,cow,dog,elephant,guinea_pig,horse,human,macaque,marmoset,mouse,opossum,orangutan,panda,pig,rabbit,rat, antisense antisense A549@0.007237,AG04450@0.0064175,BJ@0.001599,GM12878@0.2628,H1HESC@0.503839,HELAS3@0.0515,HEPG2@0.157104,HMEC@0.072655,HSMM@0.0029625,HUVEC@0.0085305,K562@0.018081,MCF7@0.115377,NHEK@0.0193783,NHLF@0.018691,SKNSHRA@0.0072955, 0 0 0 0 ENSG00000135253.8 ENST00000476647.2 chr7:128516919-128550773 40 5068 28708 intergenic 151.96 1 0,1,1 0 0,1,1 108.339581689029 1.53748084157726 20.303 290.958366219416 7.22795039710186 55.011 350.548737174428 8.73578793367703 55.28 0 0 cat,chimp,cow,dog,elephant,guinea_pig,horse,human,macaque,marmoset,mouse,opossum,orangutan,panda,pig,rabbit,rat, antisense antisense A549@0.007237,AG04450@0.0064175,BJ@0.001599,GM12878@0.2628,H1HESC@0.503839,HELAS3@0.0515,HEPG2@0.157104,HMEC@0.072655,HSMM@0.0029625,HUVEC@0.0085305,K562@0.018081,MCF7@0.115377,NHEK@0.0193783,NHLF@0.018691,SKNSHRA@0.0072955, 0 0 0 0 ENSG00000135253.8 ENST00000479474.1 chr7:128530001-128543405 14 2233 11145 intergenic 5.95 0 0,1,0 0 0,1,1 61.9426780116435 2.07725437415882 0 233.652037617555 2.96554508748318 94.996 291.515450067174 4.32965455361149 91.506 0 0 cat,chimp,cow,dog,elephant,guinea_pig,horse,human,macaque,marmoset,mouse,opossum,orangutan,panda,pig,rabbit,rat, antisense retained_intron A549@0.007237,AG04450@0.0064175,BJ@0.001599,GM12878@0.2628,H1HESC@0.503839,HELAS3@0.0515,HEPG2@0.157104,HMEC@0.072655,HSMM@0.0029625,HUVEC@0.0085305,K562@0.018081,MCF7@0.115377,NHEK@0.0193783,NHLF@0.018691,SKNSHRA@0.0072955, 0 0 0 0 ENSG00000135253.8 ENST00000545685.1 chr7:128530001-128543405 15 2230 11146 intergenic 5.95 0 0,1,0 0 0,1,1 61.6923766816143 2.09931814103714 0 233.352914798206 3.00619056163646 94.996 291.268609865471 4.37188228961062 91.506 0 0 cat,chimp,cow,dog,elephant,guinea_pig,horse,human,macaque,marmoset,mouse,opossum,orangutan,panda,pig,rabbit,rat, antisense antisense A549@0.007237,AG04450@0.0064175,BJ@0.001599,GM12878@0.2628,H1HESC@0.503839,HELAS3@0.0515,HEPG2@0.157104,HMEC@0.072655,HSMM@0.0029625,HUVEC@0.0085305,K562@0.018081,MCF7@0.115377,NHEK@0.0193783,NHLF@0.018691,SKNSHRA@0.0072955, 0 0 0 0 ENSG00000135253.8 ENST00000257704.6 chr7:128530001-128550773 23 2748 17980 intergenic 107.47 0 0,1,0 0 0,1,1 51.6532023289665 1.81173526140156 20.303 238.900655021834 7.61796440489433 55.011 302.730713245997 9.69666295884316 55.28 0 0 cat,chimp,cow,dog,elephant,guinea_pig,horse,human,macaque,marmoset,mouse,orangutan,panda,pig,rabbit,rat, antisense antisense A549@0.007237,AG04450@0.0064175,BJ@0.001599,GM12878@0.2628,H1HESC@0.503839,HELAS3@0.0515,HEPG2@0.157104,HMEC@0.072655,HSMM@0.0029625,HUVEC@0.0085305,K562@0.018081,MCF7@0.115377,NHEK@0.0193783,NHLF@0.018691,SKNSHRA@0.0072955, 0 0 0 0 ENSG00000135253.8 ENST00000487494.1 chr7:128530001-128550773 21 2753 17979 intergenic 29.95 0 0,1,0 0 0,1,1 51.8296403922993 1.79804216029813 20.303 246.399200871776 7.59302519606207 55.011 310.554304395205 9.67078257967629 55.28 0 0 cat,chimp,cow,dog,elephant,guinea_pig,horse,human,macaque,marmoset,mouse,orangutan,panda,pig,platypus,rabbit,rat, antisense antisense A549@0.007237,AG04450@0.0064175,BJ@0.001599,GM12878@0.2628,H1HESC@0.503839,HELAS3@0.0515,HEPG2@0.157104,HMEC@0.072655,HSMM@0.0029625,HUVEC@0.0085305,K562@0.018081,MCF7@0.115377,NHEK@0.0193783,NHLF@0.018691,SKNSHRA@0.0072955, 0 0 0 0 ENSG00000243230.1 ENST00000466717.1 chr7:128849616-128853386 2 533 3235 exonic -2.74 0 0,1,0 0 0,0,0 0 95.3938176197836 0 57.5553470919325 151.186398763524 0.409 59.3151969981238 143.210819165379 0.376 0 0 cat,chimp,cow,dog,elephant,guinea_pig,horse,human,macaque,orangutan,panda,pig, antisense antisense A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0.0050275, 0 0 0 0 ENSG00000240204.1 ENST00000462322.1 chr7:129142320-129152759 2 1019 9418 intergenic 13.08 0 1,1,1 0 0,0,1 6.99705593719333 0 0 45.0461236506379 1.97770227224464 0 57.8390578999019 2.68677001486515 0 0 0 chimp,cow,dog,human,macaque,marmoset,orangutan,rabbit, lincRNA processed_transcript A549@2.25606,AG04450@0.0295005,BJ@0.050239,GM12878@0.0922435,H1HESC@0.149861,HELAS3@0.451165,HEPG2@0.0327335,HMEC@0.158036,HSMM@0.047597,HUVEC@0.0105925,K562@0.288782,MCF7@2.23215,NHEK@0.11875,NHLF@0.15356,SKNSHRA@0.621895, 0 0 0 0 ENSG00000240204.1 ENST00000488846.1 chr7:129142633-129152479 2 422 9422 intergenic 8.16 0 0,1,0 0 0,0,1 0 0 0 96.2677725118483 2.14115898959881 0 126.151658767773 2.86181277860327 0 0 0 cat,chimp,cow,dog,elephant,horse,human,macaque,marmoset,mouse,opossum,orangutan,panda,rabbit, lincRNA processed_transcript A549@2.25606,AG04450@0.0295005,BJ@0.050239,GM12878@0.0922435,H1HESC@0.149861,HELAS3@0.451165,HEPG2@0.0327335,HMEC@0.158036,HSMM@0.047597,HUVEC@0.0105925,K562@0.288782,MCF7@2.23215,NHEK@0.11875,NHLF@0.15356,SKNSHRA@0.621895, 0 0 0 0 ENSG00000242078.1 ENST00000496217.1 chr7:129423210-129425025 3 302 1509 intergenic -5.21 0 0,0,1 0 0,0,0 0 0 42.826 0 0 2.151 0 0 2.187 0 0 chimp,human,macaque,marmoset,orangutan, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0.0087015,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000244036.1 ENST00000480018.1 chr7:129648694-129666391 2 549 17146 exonic -7.98 0 0,0,0 0 0,0,0 37.1165755919854 8.94785955908083 0 69.7304189435337 20.5130642715502 0 59.3005464480874 24.1132042458883 0 0 0 cat,chimp,cow,dog,elephant,horse,human,macaque,marmoset,orangutan,panda,pig,rabbit,rat, antisense antisense A549@0.042655,AG04450@0,BJ@0,GM12878@0.0308685,H1HESC@0,HELAS3@0.143917,HEPG2@0.037214,HMEC@0,HSMM@0,HUVEC@0,K562@0.004214,MCF7@0,NHEK@0.0329777,NHLF@0,SKNSHRA@0.0233755, 0 0 0 0 ENSG00000229196.3 ENST00000469264.1 chr7:129781571-129782379 2 425 381 intergenic 0 0 0,1,1 0 0,1,0 15.5294117647059 7.50656167979003 0 33.6988235294118 22.9238845144357 14.87 30.5647058823529 27.4041994750656 14.654 0 0 chimp,cow,horse,human,macaque,marmoset,orangutan,pig, antisense antisense A549@0,AG04450@0.028663,BJ@0.017002,GM12878@0,H1HESC@0,HELAS3@0.0641665,HEPG2@0.038329,HMEC@0,HSMM@0.057267,HUVEC@0.0116945,K562@0.118019,MCF7@0,NHEK@0.00496967,NHLF@0.294036,SKNSHRA@0.279451, 0 0 0 0 ENSG00000229196.3 ENST00000470348.1 chr7:129781578-129782455 2 390 485 intergenic 0 0 1,1,1 0 0,1,0 16.9230769230769 5.89690721649485 0 36.7230769230769 18.0082474226804 14.87 33.3076923076923 21.5278350515464 14.654 0 0 chimp,horse,human,macaque,marmoset,orangutan,pig, antisense antisense A549@0,AG04450@0.028663,BJ@0.017002,GM12878@0,H1HESC@0,HELAS3@0.0641665,HEPG2@0.038329,HMEC@0,HSMM@0.057267,HUVEC@0.0116945,K562@0.118019,MCF7@0,NHEK@0.00496967,NHLF@0.294036,SKNSHRA@0.279451, 0 0 0 0 ENSG00000240571.1 ENST00000483283.1 chr7:129813558-129845201 5 570 31065 exonic -1.78 0 1,1,1 0 0,0,0 106.978947368421 13.6967326573314 24.415 201.519298245614 25.3865121519395 48.817 229.571929824561 27.519684532432 64.017 0 0 chimp,cow,dog,elephant,guinea_pig,horse,human,macaque,marmoset,opossum,orangutan,panda,pig,rabbit, antisense antisense A549@0.003775,AG04450@0.014393,BJ@0,GM12878@0.005086,H1HESC@0,HELAS3@0.0173605,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0.0123475,MCF7@0,NHEK@0.002296,NHLF@0,SKNSHRA@0.008624, 0 0 0 0 ENSG00000246011.1 ENST00000501789.1 chr7:130126898-130131013 2 3240 873 exonic 0.87 0 0,0,1 0 0,0,0 68.0172839506173 88.0687285223368 1.84 47.2882716049383 106.615120274914 27.072 46.7401234567901 106.300114547537 31.428 0 0 cat,chimp,horse,human,marmoset,orangutan, lincRNA lincRNA A549@0.010026,AG04450@0.0593435,BJ@0.010253,GM12878@0.002487,H1HESC@0.105065,HELAS3@0.01545,HEPG2@0.0086635,HMEC@0,HSMM@0.0750755,HUVEC@0.0797395,K562@0,MCF7@0.006258,NHEK@0.000787667,NHLF@0.145599,SKNSHRA@0.095091, 0 0 0 0 ENSG00000233559.1 ENST00000447430.1 chr7:130538479-130613408 5 1611 73310 intergenic 1.34 0 0,1,1 0 0,0,0 0 13.6141863320147 0 11.4171322160149 13.9205838221252 0 13.8988206083178 14.6817214568272 0 0 0 chimp,cow,dog,guinea_pig,human,macaque,orangutan,panda,pig, lincRNA processed_transcript A549@0.644517,AG04450@0.309777,BJ@0.274538,GM12878@0.033579,H1HESC@0.0099235,HELAS3@1.35834,HEPG2@4.84939,HMEC@0.07348,HSMM@0.321666,HUVEC@0.462071,K562@0.0048335,MCF7@0.0164375,NHEK@0.230676,NHLF@0.175629,SKNSHRA@0.150285, 0 0 0 0 ENSG00000226380.1 ENST00000432045.1 chr7:130565751-130598069 4 2224 30088 intergenic 3.05 0 0,1,1 0 0,0,0 59.3345323741007 8.4908269077373 122.028 52.7189748201439 8.24823850039883 121.874 56.3835431654676 9.95885402818399 123.3 0 0 chimp,horse,human,macaque,marmoset,orangutan,pig, lincRNA processed_transcript A549@2.75117,AG04450@4.68502,BJ@4.32958,GM12878@1.86421,H1HESC@0.171749,HELAS3@0.868947,HEPG2@1.04882,HMEC@0.608989,HSMM@1.90116,HUVEC@2.33477,K562@0.0611665,MCF7@0.214533,NHEK@4.26482,NHLF@1.40055,SKNSHRA@1.08169, 0 0 0 0 ENSG00000226380.1 ENST00000447307.1 chr7:130566521-130597935 4 722 30686 intergenic -0.33 0 0,1,0 0 0,0,0 58.1731301939058 8.32536009906798 180.05 65.5124653739612 8.08749918529623 186.245 74.404432132964 9.76477872645506 189.336 0 0 chimp,dog,elephant,horse,human,macaque,marmoset,orangutan,pig,rabbit, lincRNA processed_transcript A549@2.75117,AG04450@4.68502,BJ@4.32958,GM12878@1.86421,H1HESC@0.171749,HELAS3@0.868947,HEPG2@1.04882,HMEC@0.608989,HSMM@1.90116,HUVEC@2.33477,K562@0.0611665,MCF7@0.214533,NHEK@4.26482,NHLF@1.40055,SKNSHRA@1.08169, 0 0 0 0 ENSG00000226380.1 ENST00000444003.1 chr7:130566536-130567582 2 361 683 intergenic 0 0 0,0,1 0 0,0,0 0 0 0 18.1523545706371 0 0 18.9030470914127 0 0 0 0 cat,chimp,cow,dog,elephant,guinea_pig,human,macaque,marmoset,mouse,orangutan,panda,pig, lincRNA processed_transcript A549@2.75117,AG04450@4.68502,BJ@4.32958,GM12878@1.86421,H1HESC@0.171749,HELAS3@0.868947,HEPG2@1.04882,HMEC@0.608989,HSMM@1.90116,HUVEC@2.33477,K562@0.0611665,MCF7@0.214533,NHEK@4.26482,NHLF@1.40055,SKNSHRA@1.08169, 0 0 0 0 ENSG00000226380.1 ENST00000418546.1 chr7:130568868-130597956 3 575 28509 intergenic -2.00 0 0,1,0 0 0,0,0 88.8591304347826 8.96110000350767 170.957 91.9373913043478 8.70507559016451 174.128 102.777391304348 10.510435301133 177.135 0 0 cat,chimp,cow,dog,guinea_pig,horse,human,macaque,marmoset,orangutan,pig, lincRNA retained_intron A549@2.75117,AG04450@4.68502,BJ@4.32958,GM12878@1.86421,H1HESC@0.171749,HELAS3@0.868947,HEPG2@1.04882,HMEC@0.608989,HSMM@1.90116,HUVEC@2.33477,K562@0.0611665,MCF7@0.214533,NHEK@4.26482,NHLF@1.40055,SKNSHRA@1.08169, 0 0 0 0 ENSG00000231721.2 ENST00000423414.1 chr7:130626519-130792822 4 612 165685 intergenic 1.15 0 0,1,1 1 0,0,0 204.006535947712 5.9109032199656 449.238 179.12908496732 8.17608111778375 332.868 147.792483660131 9.67733349428131 342.766 0 0 cat,chimp,cow,dog,horse,human,macaque,marmoset,orangutan,panda,rabbit, lincRNA processed_transcript A549@6.8617,AG04450@2.13304,BJ@2.08513,GM12878@8.93227,H1HESC@0.986676,HELAS3@6.72355,HEPG2@4.80317,HMEC@0.932019,HSMM@0.361926,HUVEC@1.51578,K562@2.17767,MCF7@1.09966,NHEK@1.88159,NHLF@1.16602,SKNSHRA@2.45971, 0 0 0 0 ENSG00000231721.2 ENST00000433079.1 chr7:130628921-130791789 5 1257 161603 intergenic 1.15 0 1,1,1 0 0,0,0 0 4.20529321856649 265.308 4.63245823389022 6.52852979214495 210.012 6.31026252983293 7.93934518542354 205.367 0 0 cat,chimp,cow,human,macaque,marmoset,orangutan,panda,pig,rabbit, lincRNA processed_transcript A549@6.8617,AG04450@2.13304,BJ@2.08513,GM12878@8.93227,H1HESC@0.986676,HELAS3@6.72355,HEPG2@4.80317,HMEC@0.932019,HSMM@0.361926,HUVEC@1.51578,K562@2.17767,MCF7@1.09966,NHEK@1.88159,NHLF@1.16602,SKNSHRA@2.45971, 0 0 0 0 ENSG00000231721.2 ENST00000451786.1 chr7:130628926-130794935 6 3499 162500 exonic 16.12 1 1,1,1 0 0,0,0 176.034009717062 5.65000615384615 113.42 179.756216061732 7.65016615384615 137.391 169.547299228351 9.00864615384616 133.288 0 0 chimp,human,marmoset,orangutan, lincRNA processed_transcript A549@6.8617,AG04450@2.13304,BJ@2.08513,GM12878@8.93227,H1HESC@0.986676,HELAS3@6.72355,HEPG2@4.80317,HMEC@0.932019,HSMM@0.361926,HUVEC@1.51578,K562@2.17767,MCF7@1.09966,NHEK@1.88159,NHLF@1.16602,SKNSHRA@2.45971, 0 0 0 0 ENSG00000231721.2 ENST00000443623.1 chr7:130628927-130668868 3 450 39487 intergenic 1.15 1 1,1,1 0 0,0,0 0 5.57712664927698 0 1.30666666666667 6.09924785372401 0 0.675555555555556 6.35958669942006 0 0 0 cat,chimp,cow,dog,elephant,guinea_pig,horse,human,macaque,marmoset,orangutan,panda,pig,rabbit, lincRNA processed_transcript A549@6.8617,AG04450@2.13304,BJ@2.08513,GM12878@8.93227,H1HESC@0.986676,HELAS3@6.72355,HEPG2@4.80317,HMEC@0.932019,HSMM@0.361926,HUVEC@1.51578,K562@2.17767,MCF7@1.09966,NHEK@1.88159,NHLF@1.16602,SKNSHRA@2.45971, 0 0 0 0 ENSG00000231721.2 ENST00000435523.1 chr7:130629555-130773233 5 548 143122 intergenic 1.15 0 0,1,1 0 0,0,0 0 4.08545157278406 0 74.6934306569343 6.13357834574699 0 87.8686131386861 7.77903466972233 0 0 0 cat,chimp,cow,dog,horse,human,macaque,marmoset,orangutan,panda,pig, lincRNA processed_transcript A549@6.8617,AG04450@2.13304,BJ@2.08513,GM12878@8.93227,H1HESC@0.986676,HELAS3@6.72355,HEPG2@4.80317,HMEC@0.932019,HSMM@0.361926,HUVEC@1.51578,K562@2.17767,MCF7@1.09966,NHEK@1.88159,NHLF@1.16602,SKNSHRA@2.45971, 0 0 0 0 ENSG00000231721.2 ENST00000431189.1 chr7:130630369-130792738 5 798 161563 intergenic -6.97 0 0,1,1 1 0,0,0 62.7218045112782 5.28598750951641 498.126 97.749373433584 7.37252960145578 391.416 98.5050125313283 8.84632620092472 391.499 0 0 cat,chimp,cow,dog,guinea_pig,horse,human,macaque,marmoset,orangutan,panda,rat, lincRNA processed_transcript A549@6.8617,AG04450@2.13304,BJ@2.08513,GM12878@8.93227,H1HESC@0.986676,HELAS3@6.72355,HEPG2@4.80317,HMEC@0.932019,HSMM@0.361926,HUVEC@1.51578,K562@2.17767,MCF7@1.09966,NHEK@1.88159,NHLF@1.16602,SKNSHRA@2.45971, 0 0 0 0 ENSG00000231721.2 ENST00000416999.1 chr7:130727595-130737309 3 384 9326 intergenic 0 0 0,0,1 0 0,0,0 0 1.51200943598542 0 87.890625 1.32554149689041 5.49 100.5859375 1.08127814711559 19.037 0 0 chimp,human,macaque,marmoset,orangutan, lincRNA processed_transcript A549@6.8617,AG04450@2.13304,BJ@2.08513,GM12878@8.93227,H1HESC@0.986676,HELAS3@6.72355,HEPG2@4.80317,HMEC@0.932019,HSMM@0.361926,HUVEC@1.51578,K562@2.17767,MCF7@1.09966,NHEK@1.88159,NHLF@1.16602,SKNSHRA@2.45971, 0 0 0 0 ENSG00000231721.2 ENST00000429901.1 chr7:130737203-130792858 3 562 55089 intergenic 0 0 0,1,0 1 0,0,0 213.330960854093 6.19532029987838 428.286 224.120996441281 8.98295485487121 307.776 198.830960854093 12.0850078963132 321.072 0 0 chimp,cow,elephant,horse,human,macaque,mouse,orangutan,panda,rabbit, lincRNA processed_transcript A549@6.8617,AG04450@2.13304,BJ@2.08513,GM12878@8.93227,H1HESC@0.986676,HELAS3@6.72355,HEPG2@4.80317,HMEC@0.932019,HSMM@0.361926,HUVEC@1.51578,K562@2.17767,MCF7@1.09966,NHEK@1.88159,NHLF@1.16602,SKNSHRA@2.45971, 0 0 0 0 ENSG00000236753.1 ENST00000429067.1 chr7:130994503-131012535 6 2037 15985 intronic 1.65 0 1,1,1 1 0,0,0 0 3.79149202377229 81.6 0 2.33093525179856 109.647 12.4545900834561 8.61276196434157 109.778 0 0 chimp,human,macaque,marmoset,orangutan, antisense antisense A549@2.64131,AG04450@0.481225,BJ@0.51478,GM12878@0.791574,H1HESC@0.974395,HELAS3@2.10552,HEPG2@2.02421,HMEC@0.886412,HSMM@0.534861,HUVEC@0.204798,K562@2.15125,MCF7@0.129362,NHEK@0.844412,NHLF@1.61806,SKNSHRA@1.2507, 0 0 0 0 ENSG00000236753.1 ENST00000444245.1 chr7:131008353-131012489 4 651 3479 intronic -3.01 0 0,1,1 1 0,0,0 0 8.28398965219891 81.6 0 0 109.647 0 0 109.778 0 0 chimp,human,macaque,marmoset,orangutan, antisense antisense A549@2.64131,AG04450@0.481225,BJ@0.51478,GM12878@0.791574,H1HESC@0.974395,HELAS3@2.10552,HEPG2@2.02421,HMEC@0.886412,HSMM@0.534861,HUVEC@0.204798,K562@2.15125,MCF7@0.129362,NHEK@0.844412,NHLF@1.61806,SKNSHRA@1.2507, 0 0 0 0 ENSG00000236753.1 ENST00000447904.1 chr7:131008391-131012079 3 872 2812 intronic -6.53 0 0,1,1 0 0,0,0 0 5.32005689900427 95.46 0 0 109.647 0 0 109.778 0 0 chimp,dog,human,macaque,marmoset,orangutan,rat, antisense retained_intron A549@2.64131,AG04450@0.481225,BJ@0.51478,GM12878@0.791574,H1HESC@0.974395,HELAS3@2.10552,HEPG2@2.02421,HMEC@0.886412,HSMM@0.534861,HUVEC@0.204798,K562@2.15125,MCF7@0.129362,NHEK@0.844412,NHLF@1.61806,SKNSHRA@1.2507, 0 0 0 0 ENSG00000236753.1 ENST00000416220.1 chr7:131008445-131012538 4 557 3530 intronic 0.48 0 1,1,1 1 0,0,0 0 8.1643059490085 81.6 0 0 109.647 0 0 109.778 0 0 chimp,human,macaque,marmoset,orangutan, antisense antisense A549@2.64131,AG04450@0.481225,BJ@0.51478,GM12878@0.791574,H1HESC@0.974395,HELAS3@2.10552,HEPG2@2.02421,HMEC@0.886412,HSMM@0.534861,HUVEC@0.204798,K562@2.15125,MCF7@0.129362,NHEK@0.844412,NHLF@1.61806,SKNSHRA@1.2507, 0 0 0 0 ENSG00000236753.1 ENST00000454515.1 chr7:131008448-131012476 4 583 3439 intronic 1.65 0 1,1,1 1 0,0,0 0 8.38034312300087 81.6 0 0 109.647 0 0 109.778 0 0 chimp,human,macaque,marmoset,orangutan, antisense antisense A549@2.64131,AG04450@0.481225,BJ@0.51478,GM12878@0.791574,H1HESC@0.974395,HELAS3@2.10552,HEPG2@2.02421,HMEC@0.886412,HSMM@0.534861,HUVEC@0.204798,K562@2.15125,MCF7@0.129362,NHEK@0.844412,NHLF@1.61806,SKNSHRA@1.2507, 0 0 0 0 ENSG00000236753.1 ENST00000447514.1 chr7:131008536-131012981 4 574 3865 exonic 0 0 0,0,1 0 0,0,0 11.8466898954704 26.6998706338939 0 53.6933797909408 20.2481241914618 0 46.5365853658537 21.3433376455369 0 0 0 chimp,human,macaque,marmoset,orangutan,rat, antisense antisense A549@2.64131,AG04450@0.481225,BJ@0.51478,GM12878@0.791574,H1HESC@0.974395,HELAS3@2.10552,HEPG2@2.02421,HMEC@0.886412,HSMM@0.534861,HUVEC@0.204798,K562@2.15125,MCF7@0.129362,NHEK@0.844412,NHLF@1.61806,SKNSHRA@1.2507, 0 0 0 0 ENSG00000243416.1 ENST00000452219.1 chr7:131582400-131618070 3 556 35110 intergenic 2.19 0 0,0,0 0 0,0,0 0 6.62623184277983 19.345 0 11.6447450868698 67.472 0 13.9225861577898 66.665 0 0 chimp,horse,human,macaque,marmoset,orangutan,panda, lincRNA processed_transcript A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0.169054, 0 0 0 0 ENSG00000224865.2 ENST00000415393.1 chr7:131594979-131633712 6 1223 37500 intergenic 2.24 0 0,0,0 0 0,0,0 0 14.54784 0 1.31643499591169 20.0967466666667 0 1.51676206050695 21.89672 0 0 0 chimp,horse,human,macaque,marmoset,orangutan,panda, lincRNA processed_transcript A549@0.001766,AG04450@0.0026235,BJ@0,GM12878@0.00164,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0.0410775, 0 0 0 0 ENSG00000225144.1 ENST00000445459.1 chr7:131945620-131956028 5 739 9661 intronic 3.73 0 0,0,1 0 0,0,0 0 14.3393023496532 0 20.9688768606225 45.7845978677156 0 44.064952638701 52.6668046786047 0 0 0 chimp,dog,elephant,horse,human,macaque,marmoset,orangutan,panda,rabbit, antisense antisense A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000223436.1 ENST00000455442.1 chr7:132037093-132052735 3 523 15115 intronic 1.16 0 0,1,0 0 0,0,0 0 40.7610982467747 214.11 0 57.4499503804168 191.679 0 61.5986106516705 221.425 0 0 chimp,dog,horse,human,macaque,marmoset,orangutan, antisense antisense A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0.362165, 0 0 0 0 ENSG00000225881.1 ENST00000436379.1 chr7:132443730-132445392 2 749 911 intergenic 2.36 1 0,0,0 0 0,0,0 0 0 0 10.9572763684913 10.5027442371021 0 11.4218958611482 10.8715697036224 0 0 0 chimp,cow,guinea_pig,horse,human,orangutan,pig, antisense antisense A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000227197.1 ENST00000453078.1 chr7:132515453-132534353 4 795 18099 intronic 2.23 0 0,0,1 0 0,0,0 0 41.590474611857 0 6.13081761006289 49.7721973589701 0 7.43647798742138 51.9791701198962 0 0 0 cat,chimp,cow,dog,elephant,horse,human,macaque,marmoset,orangutan,pig,rat, antisense antisense A549@0.0027165,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0.0034115,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000231098.1 ENST00000420268.1 chr7:133969252-133970807 2 412 1141 intergenic 0 0 0,0,0 0 0,0,0 0 0 241.23 3.00970873786408 1.41104294478528 190.517 3.65533980582524 1.49079754601227 182.015 0 0 cat,chimp,dog,human,macaque,marmoset,orangutan,panda,rabbit,rat, antisense antisense A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0.0140595,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0.0048565,NHEK@0.047531,NHLF@0,SKNSHRA@0.244779, 0 0 0 0 ENSG00000229177.1 ENST00000453087.1 chr7:134030823-134035543 2 325 4393 intergenic 1.76 0 0,0,0 0 0,0,0 0 2.31459139540178 47.925 0 10.4243114045072 106.821 0 15.9150921921238 116.909 0 0 dog,horse,human,macaque,marmoset,orangutan,panda,rat, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000224375.1 ENST00000422042.1 chr7:134368896-134372742 3 250 3592 intergenic 1.60 0 0,0,0 0 0,0,0 0 2.26224944320713 0 0 3.8304565701559 0 24.3 6.83574610244989 0 0 0 chimp,dog,human,macaque,marmoset,orangutan, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0.00504567,NHLF@0,SKNSHRA@0.010991, 0 0 0 0 ENSG00000231794.1 ENST00000412549.1 chr7:134883153-134884924 2 1675 94 intronic 1.18 0 0,0,0 0 0,0,0 0 0 43.956 2.91462686567164 0 49.858 3.05910447761194 0 50.397 0 0 chimp,human,macaque,marmoset,orangutan, antisense antisense A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0.004978,HEPG2@0.026049,HMEC@0,HSMM@0,HUVEC@0.003549,K562@0.002929,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000223388.1 ENST00000444104.1 chr7:135392861-135412258 2 149 19246 exonic 0 0 0,0,0 0 0,0,0 294.402684563758 7.14948560739894 1.93 366.979865771812 9.62179154109945 2.77 357.946308724832 14.2423360698327 2.05 0 0 cat,chimp,cow,dog,elephant,guinea_pig,horse,human,macaque,marmoset,mouse,opossum,orangutan,panda,pig,platypus,rabbit,rat, antisense antisense A549@0.0182925,AG04450@0,BJ@0.0652185,GM12878@0,H1HESC@0.0713405,HELAS3@0,HEPG2@0,HMEC@0.054233,HSMM@0.0150965,HUVEC@0.0394175,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0.232345, 0 0 0 0 ENSG00000224746.1 ENST00000419211.1 chr7:135611203-135617629 2 802 5622 intronic -17.84 0 0,0,0 0 0,0,0 0 225.981323372465 0 0 173.530060476699 0 0 156.226609747421 1.175 0 0 chimp,cow,dog,horse,human,macaque,marmoset,orangutan,panda, processed_transcript processed_transcript A549@0.012418,AG04450@0.0109505,BJ@0,GM12878@0,H1HESC@0.0107715,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0.042258,HUVEC@0,K562@0,MCF7@0.022732,NHEK@0,NHLF@0.0166495,SKNSHRA@0.0166585, 0 0 0 0 ENSG00000230649.1 ENST00000440744.1 chr7:135710509-135769416 4 453 58448 intergenic -3.21 0 0,0,0 0 0,0,0 68.0618101545254 11.7042499315631 0 77.0309050772627 12.565579660553 1.673 96.3487858719647 15.0931939501779 1.757 0 0 chimp,cow,guinea_pig,horse,human,macaque,marmoset,opossum,orangutan,panda,rabbit, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@1.00916,H1HESC@0,HELAS3@0.243258,HEPG2@0.0716255,HMEC@0,HSMM@0,HUVEC@0.0353515,K562@0.0058585,MCF7@0.067172,NHEK@0,NHLF@0,SKNSHRA@0.222864, 0 0 0 0 ENSG00000232053.1 ENST00000445293.1 chr7:135777673-136121956 6 868 343405 intergenic -2.69 0 0,1,0 0 0,0,0 0 6.28652465747441 0 2.75345622119816 9.04045660371863 0 2.79953917050691 12.2116334939794 0 0 0 chimp,horse,human,macaque,marmoset,orangutan, lincRNA lincRNA A549@0,AG04450@0.0025645,BJ@0,GM12878@0.225862,H1HESC@0,HELAS3@0.106707,HEPG2@0.0074425,HMEC@0,HSMM@0.0124445,HUVEC@0.0061105,K562@4.95045,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0.067577, 0 0 0 0 ENSG00000232053.1 ENST00000435996.1 chr7:135777705-136122174 4 729 343734 intergenic 0.41 0 1,1,1 0 0,0,0 0 6.28050760180837 0 3.27846364883402 9.0318036621341 0 3.33333333333333 12.1999453065452 0 0 0 chimp,cow,guinea_pig,human,macaque,marmoset,orangutan,rabbit, lincRNA lincRNA A549@0,AG04450@0.0025645,BJ@0,GM12878@0.225862,H1HESC@0,HELAS3@0.106707,HEPG2@0.0074425,HMEC@0,HSMM@0.0124445,HUVEC@0.0061105,K562@4.95045,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0.067577, 0 0 0 0 ENSG00000232053.1 ENST00000437569.1 chr7:136090011-136122130 2 383 31734 intergenic 0.41 0 0,1,1 0 0,0,0 0 3.18465998613475 0 0 3.61555429507783 0 0 4.04824478477343 0 0 0 chimp,human,macaque,marmoset,orangutan, lincRNA lincRNA A549@0,AG04450@0.0025645,BJ@0,GM12878@0.225862,H1HESC@0,HELAS3@0.106707,HEPG2@0.0074425,HMEC@0,HSMM@0.0124445,HUVEC@0.0061105,K562@4.95045,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0.067577, 0 0 0 0 ENSG00000232053.1 ENST00000454735.1 chr7:136112143-136122158 2 483 9530 intergenic 0.41 0 0,0,1 0 0,0,0 0 4.46589716684155 16.73 0 0 7.627 0 0 8.236 0 0 chimp,human,macaque,marmoset,orangutan, lincRNA lincRNA A549@0,AG04450@0.0025645,BJ@0,GM12878@0.225862,H1HESC@0,HELAS3@0.106707,HEPG2@0.0074425,HMEC@0,HSMM@0.0124445,HUVEC@0.0061105,K562@4.95045,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0.067577, 0 0 0 0 ENSG00000234352.1 ENST00000439694.1 chr7:136468822-136866518 4 2156 395534 encompassing -5.86 0 0,0,0 0 0,0,0 27.0013914656772 10.2060783649446 0 16.9081632653061 12.1285831306537 0 14.291280148423 14.4833035845212 0 0 0 chimp,cow,dog,elephant,guinea_pig,horse,human,macaque,marmoset,mouse,orangutan,panda,pig,rabbit,rat, lincRNA processed_transcript A549@0,AG04450@0.0026585,BJ@0.00114,GM12878@0,H1HESC@0.0457735,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0.00364,MCF7@0,NHEK@0.000902,NHLF@0.0009035,SKNSHRA@0, 0 0 0 0 ENSG00000234352.1 ENST00000425981.1 chr7:136584477-136849088 4 577 264028 intronic -9.16 0 0,0,0 0 0,0,0 0 12.5490440407836 0 6.62911611785095 13.4614510582211 4.462 203.69150779896 14.8208712712288 114.241 0 0 cat,chimp,cow,dog,elephant,guinea_pig,horse,human,macaque,marmoset,mouse,orangutan,panda,pig,rabbit,rat, lincRNA processed_transcript A549@0,AG04450@0.0026585,BJ@0.00114,GM12878@0,H1HESC@0.0457735,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0.00364,MCF7@0,NHEK@0.000902,NHLF@0.0009035,SKNSHRA@0, 0 0 0 0 ENSG00000231114.1 ENST00000447529.1 chr7:137003339-137011700 2 1833 6526 intronic 2.51 0 0,0,0 0 0,0,0 0 3.33312902237205 0 1.2176759410802 8.29773214832976 0 2.54337152209493 7.58289917254061 0 0 0 chimp,cow,horse,human,macaque,marmoset,orangutan,pig, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0.00269933,NHLF@0,SKNSHRA@0.0159585, 0 0 0 0 ENSG00000231114.1 ENST00000448365.1 chr7:137009490-137010564 2 486 586 intronic 2.51 0 0,0,1 0 0,0,0 0 15.7679180887372 0 0 44.9317406143345 1.673 4.7962962962963 29.0580204778157 1.701 0 0 cat,chimp,dog,elephant,horse,human,macaque,marmoset,orangutan,panda,rabbit, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0.00269933,NHLF@0,SKNSHRA@0.0159585, 0 0 0 0 ENSG00000228031.1 ENST00000438969.1 chr7:137029676-137039229 4 553 8994 intergenic 3.29 0 0,0,0 0 0,0,0 0 1.24894374027129 433.346 35.4538878842676 12.1994663108739 392.796 35.9746835443038 12.5859461863465 388.061 0 0 chimp,cow,human,macaque,marmoset,orangutan,pig, lincRNA lincRNA A549@0,AG04450@0.0264555,BJ@0,GM12878@0.681296,H1HESC@0.008885,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0.007388,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0.0104315,SKNSHRA@0.624943, 0 0 0 0 ENSG00000237243.1 ENST00000418554.1 chr7:137638094-137642712 4 573 4039 intronic 0.12 0 0,0,0 0 0,0,0 0 16.1705867789057 0 108.0907504363 5.67120574399604 7.04 108.628272251309 6.77865808368408 11.469 0 0 chimp,dog,horse,human,orangutan, antisense antisense A549@0,AG04450@0.0051305,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000225559.1 ENST00000413567.1 chr7:137848186-137849383 2 455 740 intergenic -3.65 0 0,0,0 0 0,0,0 0 0 15.912 0 5.36216216216216 3.161 0 5.72972972972973 7.02 0 0 chimp,human, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0.078578,H1HESC@0.0564795,HELAS3@0,HEPG2@0.0422555,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0.0896045,NHEK@0,NHLF@0,SKNSHRA@0.109817, 0 0 0 0 ENSG00000240889.1 ENST00000465466.1 chr7:140395136-140396877 2 1646 93 exonic 11.28 0 1,1,1 0 0,0,0 0 0 0 6.5321992709599 78.7311827956989 0 6.82685297691373 83.3440860215054 0 0 0 chimp,human,macaque,marmoset,orangutan, antisense antisense A549@0.177948,AG04450@0.219434,BJ@0.191721,GM12878@0.251311,H1HESC@0.268177,HELAS3@0.319769,HEPG2@0.308681,HMEC@0.575654,HSMM@0.504278,HUVEC@0.333485,K562@0.294125,MCF7@0.642643,NHEK@0.283607,NHLF@0.194792,SKNSHRA@0.348455, 0 0 0 0 ENSG00000204990.3 ENST00000461145.1 chr7:141114183-141116190 2 1437 568 intergenic 0.07 0 0,1,0 0 0,1,0 0 0 45.285 14.5260960334029 3.49295774647887 35.292 16.2150313152401 3.97711267605634 33.632 0 0 cat,chimp,cow,dog,horse,human,macaque,marmoset,orangutan,panda,pig, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0.0184535,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000228775.3 ENST00000488785.1 chr7:141404138-141438030 7 2255 31625 exonic 2.06 0 0,1,0 0 0,1,0 17.0607538802661 10.3488695652174 10.78 29.0988913525499 12.7985138339921 26.46 30.6186252771619 15.2078102766798 26.605 0 0 chimp,horse,human,macaque,marmoset,orangutan,panda,pig, lincRNA processed_transcript A549@0.195698,AG04450@0.15544,BJ@0.497955,GM12878@0.262678,H1HESC@0.0611275,HELAS3@0.172289,HEPG2@0.082326,HMEC@0.120925,HSMM@0.317983,HUVEC@0.480733,K562@0.141606,MCF7@1.20945,NHEK@0.243594,NHLF@0.226513,SKNSHRA@1.95524, 0 0 0 0 ENSG00000228775.3 ENST00000465110.1 chr7:141404432-141438020 3 1255 32329 exonic 1.99 0 0,1,0 0 0,1,0 19.1872509960159 10.5766339818739 10.78 22.9322709163347 13.6592842339695 26.46 21.7729083665339 16.1671254910452 26.605 0 0 chimp,horse,human,macaque,marmoset,orangutan,panda,pig, lincRNA processed_transcript A549@0.195698,AG04450@0.15544,BJ@0.497955,GM12878@0.262678,H1HESC@0.0611275,HELAS3@0.172289,HEPG2@0.082326,HMEC@0.120925,HSMM@0.317983,HUVEC@0.480733,K562@0.141606,MCF7@1.20945,NHEK@0.243594,NHLF@0.226513,SKNSHRA@1.95524, 0 0 0 0 ENSG00000228775.3 ENST00000495800.1 chr7:141404432-141438020 4 1408 32174 exonic 1.99 0 0,1,0 0 0,1,0 17.1022727272727 10.6275874930068 10.78 20.4403409090909 13.7250885808417 26.46 19.4069602272727 16.2450114999689 26.605 0 0 chimp,horse,human,macaque,marmoset,orangutan,panda,pig, lincRNA processed_transcript A549@0.195698,AG04450@0.15544,BJ@0.497955,GM12878@0.262678,H1HESC@0.0611275,HELAS3@0.172289,HEPG2@0.082326,HMEC@0.120925,HSMM@0.317983,HUVEC@0.480733,K562@0.141606,MCF7@1.20945,NHEK@0.243594,NHLF@0.226513,SKNSHRA@1.95524, 0 0 0 0 ENSG00000228775.3 ENST00000478332.1 chr7:141404432-141438057 7 2252 31361 exonic 5.41 0 0,1,0 0 0,1,0 17.0834813499112 10.4359873728516 10.78 41.0968028419183 12.0991358693919 24.84 46.4218472468916 14.2571346576959 24.937 0 0 chimp,horse,human,macaque,marmoset,orangutan,panda,pig, lincRNA retained_intron A549@0.195698,AG04450@0.15544,BJ@0.497955,GM12878@0.262678,H1HESC@0.0611275,HELAS3@0.172289,HEPG2@0.082326,HMEC@0.120925,HSMM@0.317983,HUVEC@0.480733,K562@0.141606,MCF7@1.20945,NHEK@0.243594,NHLF@0.226513,SKNSHRA@1.95524, 0 0 0 0 ENSG00000228775.3 ENST00000462383.1 chr7:141404432-141438146 5 1719 31987 exonic 2.06 0 0,0,0 0 0,1,0 22.3804537521815 10.2317503985994 10.78 27.6940081442699 13.2674211398381 24.84 29.9098312972658 15.639009597649 24.937 0 0 chimp,horse,human,macaque,marmoset,orangutan,panda,pig, lincRNA processed_transcript A549@0.195698,AG04450@0.15544,BJ@0.497955,GM12878@0.262678,H1HESC@0.0611275,HELAS3@0.172289,HEPG2@0.082326,HMEC@0.120925,HSMM@0.317983,HUVEC@0.480733,K562@0.141606,MCF7@1.20945,NHEK@0.243594,NHLF@0.226513,SKNSHRA@1.95524, 0 0 0 0 ENSG00000228775.3 ENST00000459753.1 chr7:141405496-141438052 5 560 31988 exonic 2.05 0 0,1,0 0 0,1,0 43 10.6893835188196 10.78 47 13.8048955858447 24.84 44.2017857142857 16.3394710516444 24.937 1 1 chimp,human,macaque,marmoset,orangutan, lincRNA processed_transcript A549@0.195698,AG04450@0.15544,BJ@0.497955,GM12878@0.262678,H1HESC@0.0611275,HELAS3@0.172289,HEPG2@0.082326,HMEC@0.120925,HSMM@0.317983,HUVEC@0.480733,K562@0.141606,MCF7@1.20945,NHEK@0.243594,NHLF@0.226513,SKNSHRA@1.95524, 0 0 0 0 ENSG00000228775.3 ENST00000471512.1 chr7:141405503-141438030 6 574 31943 exonic -0.02 0 0,1,0 0 0,1,0 67.0243902439024 10.2458441599098 10.78 73.006968641115 13.2856963967066 26.46 79.280487804878 15.6605516075509 26.605 0 0 chimp,cow,guinea_pig,horse,human,macaque,marmoset,orangutan,panda,rabbit, lincRNA processed_transcript A549@0.195698,AG04450@0.15544,BJ@0.497955,GM12878@0.262678,H1HESC@0.0611275,HELAS3@0.172289,HEPG2@0.082326,HMEC@0.120925,HSMM@0.317983,HUVEC@0.480733,K562@0.141606,MCF7@1.20945,NHEK@0.243594,NHLF@0.226513,SKNSHRA@1.95524, 0 0 0 0 ENSG00000228775.3 ENST00000484172.1 chr7:141420595-141437341 4 672 16068 exonic 3.12 0 0,1,0 0 0,1,0 109.355654761905 9.53871048045805 0 93.0833333333333 16.3254916604431 3 114.424107142857 19.0360343539955 3.058 0 0 chimp,horse,human,macaque,marmoset,orangutan,pig, lincRNA processed_transcript A549@0.195698,AG04450@0.15544,BJ@0.497955,GM12878@0.262678,H1HESC@0.0611275,HELAS3@0.172289,HEPG2@0.082326,HMEC@0.120925,HSMM@0.317983,HUVEC@0.480733,K562@0.141606,MCF7@1.20945,NHEK@0.243594,NHLF@0.226513,SKNSHRA@1.95524, 0 0 0 0 ENSG00000228775.3 ENST00000486906.1 chr7:141423702-141437575 3 667 13202 exonic 2.05 0 0,1,0 0 0,1,0 36.1019490254873 8.5609756097561 0 37.0314842578711 15.0831692167853 3 34.6101949025487 17.9818209362218 3.058 1 1 chimp,human,macaque,marmoset,orangutan, lincRNA processed_transcript A549@0.195698,AG04450@0.15544,BJ@0.497955,GM12878@0.262678,H1HESC@0.0611275,HELAS3@0.172289,HEPG2@0.082326,HMEC@0.120925,HSMM@0.317983,HUVEC@0.480733,K562@0.141606,MCF7@1.20945,NHEK@0.243594,NHLF@0.226513,SKNSHRA@1.95524, 0 0 0 0 ENSG00000228775.3 ENST00000473776.1 chr7:141427449-141438031 2 529 10051 intronic -0.93 0 0,1,1 0 0,1,0 0 4.74191622724107 10.78 11.3421550094518 6.17759426922694 26.46 11.7523629489603 6.73316087951448 26.605 0 0 cat,chimp,horse,human,macaque,marmoset,orangutan, lincRNA processed_transcript A549@0.195698,AG04450@0.15544,BJ@0.497955,GM12878@0.262678,H1HESC@0.0611275,HELAS3@0.172289,HEPG2@0.082326,HMEC@0.120925,HSMM@0.317983,HUVEC@0.480733,K562@0.141606,MCF7@1.20945,NHEK@0.243594,NHLF@0.226513,SKNSHRA@1.95524, 0 0 0 0 ENSG00000241881.1 ENST00000486508.1 chr7:141985579-141988698 2 382 2735 intergenic -11.63 0 0,1,0 0 0,0,0 47.3926701570681 5.11882998171846 0 107.609947643979 25.0387568555759 0 199.539267015707 40.6292504570384 0 0 0 cat,chimp,cow,dog,elephant,guinea_pig,horse,human,macaque,marmoset,mouse,opossum,orangutan,panda,pig,platypus,rabbit,rat, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000241657.1 ENST00000471935.1 chr7:142197570-142198069 2 406 91 intergenic 0 0 0,0,0 0 0,0,0 0 0 0 13.6527093596059 0 0 27.35960591133 0 0 0 0 cat,chimp,cow,dog,elephant,guinea_pig,horse,human,macaque,marmoset,mouse,opossum,orangutan,panda,pig,platypus,rabbit,rat, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0.0055705, 0 0 0 0 ENSG00000251060.1 ENST00000506718.1 chr7:142413074-142426272 7 2755 10431 intergenic 5.39 0 0,0,0 0 0,1,0 0 0 0 4.80725952813067 0.58153580672994 0 5.76297640653357 0.598312721694948 444.408 0 1 chimp,human,macaque,orangutan, processed_transcript processed_transcript A549@0,AG04450@0,BJ@0.0011715,GM12878@0,H1HESC@0.280781,HELAS3@0.006316,HEPG2@0.001061,HMEC@0,HSMM@0.000745,HUVEC@0,K562@0.99117,MCF7@0,NHEK@0.0207477,NHLF@0.0006985,SKNSHRA@0, 0 0 0 0 ENSG00000246032.2 ENST00000499517.1 chr7:142493795-142497628 2 2942 889 intergenic 2.62 0 0,1,1 0 0,0,0 3.98708361658736 0 0 8.21923861318831 18.1574803149606 0 13.0533650577838 26.1608548931384 0 0 1 human,macaque, lincRNA lincRNA A549@0,AG04450@0.011656,BJ@0,GM12878@0.194939,H1HESC@0.0354895,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0.001398,HUVEC@0.0163375,K562@0.0230435,MCF7@0.0326785,NHEK@0.00268467,NHLF@0,SKNSHRA@0.0046265, 0 0 0 0 ENSG00000224970.1 ENST00000438839.1 chr7:142573589-142590199 2 239 16369 exonic -2.03 0 0,0,0 0 0,0,0 31.2970711297071 18.0257193475472 44.64 102.041841004184 28.0789296841591 142.206 130.753138075314 31.5256888020038 181.144 0 0 chimp,dog,elephant,guinea_pig,horse,human,macaque,marmoset,mouse,opossum,pig, antisense antisense A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0.020744,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000231840.1 ENST00000427392.1 chr7:142952357-142983756 4 588 30805 exonic -5.21 0 0,1,1 0 0,0,0 27.3809523809524 6.89232267489044 0 78.2585034013605 12.884077260185 29.029 60.7687074829932 11.4965752312936 28.033 0 0 chimp,guinea_pig,horse,human,macaque,marmoset,orangutan,pig, antisense antisense A549@0.097795,AG04450@0.009809,BJ@0.0272785,GM12878@0.0618475,H1HESC@0.05943,HELAS3@0.075467,HEPG2@0.0426225,HMEC@0.00896,HSMM@0.0094905,HUVEC@0.131207,K562@0.09107,MCF7@0.046582,NHEK@0.00431267,NHLF@0.0117405,SKNSHRA@0.127161, 0 0 0 0 ENSG00000231840.1 ENST00000446192.1 chr7:142982813-142984473 2 455 1203 exonic 0 0 0,1,1 0 0,0,0 0 36.0340814630091 0 3.27032967032967 97.667497921862 12.25 3.30989010989011 88.1862011637573 14.047 0 0 cat,chimp,dog,horse,human,macaque,marmoset,orangutan,panda, antisense antisense A549@0.097795,AG04450@0.009809,BJ@0.0272785,GM12878@0.0618475,H1HESC@0.05943,HELAS3@0.075467,HEPG2@0.0426225,HMEC@0.00896,HSMM@0.0094905,HUVEC@0.131207,K562@0.09107,MCF7@0.046582,NHEK@0.00431267,NHLF@0.0117405,SKNSHRA@0.127161, 0 0 0 0 ENSG00000232533.1 ENST00000429630.1 chr7:143076785-143077588 2 646 155 intergenic 1.26 0 1,1,1 0 0,0,0 0 0 61.65 12.0696594427245 0 89.468 11.9628482972136 0 84.901 0 0 cat,chimp,human,macaque,marmoset,orangutan,panda,pig, antisense antisense A549@7.71091,AG04450@10.2007,BJ@11.7663,GM12878@1.2437,H1HESC@4.49871,HELAS3@4.9086,HEPG2@5.54794,HMEC@4.56806,HSMM@7.51712,HUVEC@6.95453,K562@4.67302,MCF7@2.48124,NHEK@5.26121,NHLF@7.98178,SKNSHRA@77.6137, 0 0 0 0 ENSG00000229153.1 ENST00000429289.1 chr7:143104906-143220542 5 5013 110615 intronic 2.25 1 0,1,0 0 0,0,0 2.05066826251745 8.95792614021607 29.397 13.1274685816876 10.425150296072 60.062 13.9140235387991 10.5154002621706 71.237 0 0 chimp,human,macaque,marmoset,orangutan, lincRNA processed_transcript A549@0.0438455,AG04450@0.029656,BJ@0.01502,GM12878@0.286001,H1HESC@0.388705,HELAS3@0.0195405,HEPG2@0.0417125,HMEC@0.081608,HSMM@0.0378315,HUVEC@0.0641515,K562@0.361947,MCF7@0.0788395,NHEK@0.240003,NHLF@0.025853,SKNSHRA@2.15165, 0 0 0 0 ENSG00000229153.1 ENST00000421648.1 chr7:143104926-143112923 3 481 7512 intronic -1.48 0 1,1,1 0 0,0,0 10.6860706860707 23.9578008519702 34.537 0 35.9349041533546 60.062 0 35.283280085197 71.237 0 0 cat,chimp,guinea_pig,human,macaque,marmoset,orangutan, lincRNA processed_transcript A549@0.0438455,AG04450@0.029656,BJ@0.01502,GM12878@0.286001,H1HESC@0.388705,HELAS3@0.0195405,HEPG2@0.0417125,HMEC@0.081608,HSMM@0.0378315,HUVEC@0.0641515,K562@0.361947,MCF7@0.0788395,NHEK@0.240003,NHLF@0.025853,SKNSHRA@2.15165, 0 0 0 0 ENSG00000243583.1 ENST00000466281.1 chr7:143651937-143656202 2 415 3848 intergenic -8.69 0 0,0,0 0 0,0,0 0 0 0 0 0 0 0 0 0 0 0 chimp,dog,elephant,horse,human,macaque,marmoset,orangutan,panda, processed_transcript processed_transcript A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0.0206095,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000243583.1 ENST00000470988.1 chr7:143656056-143694405 3 402 37943 encompassing 1.42 1 0,0,1 0 0,0,0 0 5.10631737079303 0 0 10.2379622064676 0 0 30.5039928313523 0 0 0 chimp,human,macaque,marmoset,orangutan, processed_transcript processed_transcript A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0.0206095,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000244198.1 ENST00000498693.1 chr7:143891951-143940845 5 851 48035 intronic -3.11 0 0,0,0 0 0,0,0 0 0 0 0 5.31539502446133 7.573 0 6.01419798063912 7.492 0 0 chimp,horse,human,macaque,orangutan,panda,pig, antisense antisense A549@0.272655,AG04450@0.0780305,BJ@1.13619,GM12878@0.482864,H1HESC@1.54153,HELAS3@0.201341,HEPG2@0,HMEC@0.281843,HSMM@0.121521,HUVEC@0.42754,K562@0.0325305,MCF7@0.250602,NHEK@0.204466,NHLF@0.317731,SKNSHRA@0.0128255, 0 0 0 0 ENSG00000244198.1 ENST00000460955.1 chr7:143892414-143977640 3 566 84656 exonic -2.74 0 0,0,0 0 0,0,0 0 0.838133150633151 0 110.994699646643 11.676915989416 7.573 115.120141342756 12.909905972406 7.492 0 0 cat,chimp,cow,dog,guinea_pig,horse,human,macaque,orangutan,rabbit, antisense antisense A549@0.272655,AG04450@0.0780305,BJ@1.13619,GM12878@0.482864,H1HESC@1.54153,HELAS3@0.201341,HEPG2@0,HMEC@0.281843,HSMM@0.121521,HUVEC@0.42754,K562@0.0325305,MCF7@0.250602,NHEK@0.204466,NHLF@0.317731,SKNSHRA@0.0128255, 0 0 87 2 ENSG00000244198.1 ENST00000464929.1 chr7:143892447-143940924 6 813 47654 exonic 1.63 0 0,0,0 0 0,0,0 0 0 0 77.2730627306273 4.03126704998531 7.573 80.1451414514145 4.68615436269778 7.492 0 0 chimp,dog,guinea_pig,horse,human,macaque,orangutan,pig, antisense antisense A549@0.272655,AG04450@0.0780305,BJ@1.13619,GM12878@0.482864,H1HESC@1.54153,HELAS3@0.201341,HEPG2@0,HMEC@0.281843,HSMM@0.121521,HUVEC@0.42754,K562@0.0325305,MCF7@0.250602,NHEK@0.204466,NHLF@0.317731,SKNSHRA@0.0128255, 105 2 0 0 ENSG00000244198.1 ENST00000474656.1 chr7:143892451-143911316 4 769 18090 exonic -3.11 0 0,0,0 0 0,0,0 0 0 0 81.6944083224968 0.875621890547264 7.573 84.7308192457737 1.56804864566059 7.492 0 0 chimp,horse,human,macaque,orangutan,pig, antisense antisense A549@0.272655,AG04450@0.0780305,BJ@1.13619,GM12878@0.482864,H1HESC@1.54153,HELAS3@0.201341,HEPG2@0,HMEC@0.281843,HSMM@0.121521,HUVEC@0.42754,K562@0.0325305,MCF7@0.250602,NHEK@0.204466,NHLF@0.317731,SKNSHRA@0.0128255, 0 0 0 0 ENSG00000244198.1 ENST00000493248.1 chr7:143892612-143947598 5 526 54452 exonic -2.15 0 0,0,1 0 0,0,0 0 0 0 105.984790874525 3.58719606258723 14.648 107.714828897338 4.1629508557996 15.992 0 0 chimp,horse,human,macaque,orangutan, antisense antisense A549@0.272655,AG04450@0.0780305,BJ@1.13619,GM12878@0.482864,H1HESC@1.54153,HELAS3@0.201341,HEPG2@0,HMEC@0.281843,HSMM@0.121521,HUVEC@0.42754,K562@0.0325305,MCF7@0.250602,NHEK@0.204466,NHLF@0.317731,SKNSHRA@0.0128255, 0 0 0 0 ENSG00000244198.1 ENST00000480074.1 chr7:143892981-143929388 3 553 35850 exonic 7.61 0 0,0,0 0 0,0,0 0 0 0 92.0162748643761 1.17885634588563 79.059 66.5171790235081 2.65559274755927 81.538 0 0 cat,chimp,cow,dog,elephant,guinea_pig,horse,human,macaque,marmoset,mouse,opossum,orangutan,panda,pig,rabbit,rat, antisense antisense A549@0.272655,AG04450@0.0780305,BJ@1.13619,GM12878@0.482864,H1HESC@1.54153,HELAS3@0.201341,HEPG2@0,HMEC@0.281843,HSMM@0.121521,HUVEC@0.42754,K562@0.0325305,MCF7@0.250602,NHEK@0.204466,NHLF@0.317731,SKNSHRA@0.0128255, 0 0 0 0 ENSG00000244198.1 ENST00000477797.1 chr7:143904783-143947674 2 255 42634 intronic -5.02 0 0,0,1 0 0,0,0 0 0 0 0 4.21002017169395 0 0 4.89294928929962 0 0 0 chimp,cow,dog,elephant,horse,human,macaque,marmoset,orangutan,panda,pig,rabbit, antisense antisense A549@0.272655,AG04450@0.0780305,BJ@1.13619,GM12878@0.482864,H1HESC@1.54153,HELAS3@0.201341,HEPG2@0,HMEC@0.281843,HSMM@0.121521,HUVEC@0.42754,K562@0.0325305,MCF7@0.250602,NHEK@0.204466,NHLF@0.317731,SKNSHRA@0.0128255, 0 0 0 0 ENSG00000244198.1 ENST00000489077.1 chr7:143904785-143940928 5 418 35717 intronic 1.63 0 0,0,0 0 0,0,0 0 0 0 0 4.93507293445698 0 0 5.74625528459837 0 0 0 chimp,cow,human,macaque,marmoset,orangutan,panda, antisense antisense A549@0.272655,AG04450@0.0780305,BJ@1.13619,GM12878@0.482864,H1HESC@1.54153,HELAS3@0.201341,HEPG2@0,HMEC@0.281843,HSMM@0.121521,HUVEC@0.42754,K562@0.0325305,MCF7@0.250602,NHEK@0.204466,NHLF@0.317731,SKNSHRA@0.0128255, 174 2 0 0 ENSG00000244479.1 ENST00000476560.1 chr7:143948357-144052231 3 764 103106 intronic 23.87 0 0,1,0 0 0,1,0 0 2.5628382441371 73.536 90.2539267015707 13.1472368242391 102.628 53.0732984293194 14.8651290904506 105.719 0 0 cat,chimp,cow,dog,elephant,guinea_pig,horse,human,macaque,marmoset,mouse,opossum,orangutan,panda,pig,platypus,rabbit,rat, lincRNA processed_transcript A549@2.30598,AG04450@1.31319,BJ@7.68434,GM12878@1.95333,H1HESC@5.02703,HELAS3@2.21409,HEPG2@0.303366,HMEC@4.62558,HSMM@0.424094,HUVEC@0.448321,K562@0.14159,MCF7@2.54562,NHEK@2.26348,NHLF@2.4523,SKNSHRA@0.090764, 0 0 0 0 ENSG00000244479.1 ENST00000463561.1 chr7:143948418-144052622 6 858 103336 exonic -3.11 0 0,1,0 0 0,1,0 74.1002331002331 2.6497929085701 24.258 160.75641025641 13.3036599055508 34.151 128.79020979021 15.008922350391 40.783 0 0 cat,chimp,cow,dog,elephant,guinea_pig,horse,human,macaque,marmoset,mouse,opossum,orangutan,panda,pig,rabbit,rat, lincRNA processed_transcript A549@2.30598,AG04450@1.31319,BJ@7.68434,GM12878@1.95333,H1HESC@5.02703,HELAS3@2.21409,HEPG2@0.303366,HMEC@4.62558,HSMM@0.424094,HUVEC@0.448321,K562@0.14159,MCF7@2.54562,NHEK@2.26348,NHLF@2.4523,SKNSHRA@0.090764, 105 2 0 0 ENSG00000244479.1 ENST00000461843.1 chr7:143948480-144040391 2 334 91575 intronic 0 0 0,0,0 0 0,1,0 0 2.77143325143325 0 163.88622754491 14.8027190827191 0 93.8712574850299 16.736926016926 0 0 0 cat,chimp,cow,dog,elephant,guinea_pig,horse,human,macaque,marmoset,mouse,opossum,orangutan,panda,pig,platypus,rabbit,rat, lincRNA processed_transcript A549@2.30598,AG04450@1.31319,BJ@7.68434,GM12878@1.95333,H1HESC@5.02703,HELAS3@2.21409,HEPG2@0.303366,HMEC@4.62558,HSMM@0.424094,HUVEC@0.448321,K562@0.14159,MCF7@2.54562,NHEK@2.26348,NHLF@2.4523,SKNSHRA@0.090764, 0 0 0 0 ENSG00000244479.1 ENST00000478806.1 chr7:143948501-144052800 2 571 103726 exonic -0.16 0 0,0,0 0 0,1,0 111.345008756567 2.63982993656364 24.258 231.663747810858 13.2536393961013 24.391 205.607705779335 14.9524902146039 25.515 0 0 cat,chimp,cow,dog,elephant,guinea_pig,horse,human,macaque,marmoset,mouse,opossum,orangutan,panda,pig,rabbit,rat, lincRNA processed_transcript A549@2.30598,AG04450@1.31319,BJ@7.68434,GM12878@1.95333,H1HESC@5.02703,HELAS3@2.21409,HEPG2@0.303366,HMEC@4.62558,HSMM@0.424094,HUVEC@0.448321,K562@0.14159,MCF7@2.54562,NHEK@2.26348,NHLF@2.4523,SKNSHRA@0.090764, 0 0 0 0 ENSG00000244479.1 ENST00000489488.1 chr7:143949389-144052693 2 458 102844 exonic -2.00 0 0,0,0 0 0,0,0 138.816593886463 2.66246937108631 24.258 152.526200873362 13.3673038777177 34.151 162.399563318777 15.0807242036482 37.783 0 0 cow,dog,guinea_pig,horse,human,macaque,orangutan,rabbit,rat, lincRNA processed_transcript A549@2.30598,AG04450@1.31319,BJ@7.68434,GM12878@1.95333,H1HESC@5.02703,HELAS3@2.21409,HEPG2@0.303366,HMEC@4.62558,HSMM@0.424094,HUVEC@0.448321,K562@0.14159,MCF7@2.54562,NHEK@2.26348,NHLF@2.4523,SKNSHRA@0.090764, 0 0 0 0 ENSG00000244479.1 ENST00000487102.1 chr7:143951189-144052461 3 758 100510 exonic 0.46 0 0,1,0 0 0,1,0 15.1583113456464 2.7242960899413 74.408 13.0976253298153 13.6777136603323 90.193 14.94327176781 15.4115809372202 92.088 0 0 chimp,cow,dog,elephant,guinea_pig,horse,human,macaque,marmoset,mouse,orangutan,panda,pig,rabbit,rat, lincRNA processed_transcript A549@2.30598,AG04450@1.31319,BJ@7.68434,GM12878@1.95333,H1HESC@5.02703,HELAS3@2.21409,HEPG2@0.303366,HMEC@4.62558,HSMM@0.424094,HUVEC@0.448321,K562@0.14159,MCF7@2.54562,NHEK@2.26348,NHLF@2.4523,SKNSHRA@0.090764, 0 0 0 0 ENSG00000244479.1 ENST00000493539.1 chr7:143997488-144040394 2 255 42649 exonic -5.02 0 0,0,0 0 0,0,0 0 3.92039672676968 0 0 6.61527820113016 0 8.57647058823529 6.03158338999742 0 0 0 chimp,cow,dog,elephant,horse,human,macaque,marmoset,orangutan,panda,pig,rabbit, lincRNA processed_transcript A549@2.30598,AG04450@1.31319,BJ@7.68434,GM12878@1.95333,H1HESC@5.02703,HELAS3@2.21409,HEPG2@0.303366,HMEC@4.62558,HSMM@0.424094,HUVEC@0.448321,K562@0.14159,MCF7@2.54562,NHEK@2.26348,NHLF@2.4523,SKNSHRA@0.090764, 0 0 0 0 ENSG00000244479.1 ENST00000496968.1 chr7:143997564-144052613 5 526 54515 exonic -2.15 0 0,1,0 0 0,0,0 120.87072243346 3.43439420343025 24.258 132.807984790875 5.52734109878015 34.151 137.657794676806 5.05400348527928 40.783 0 0 chimp,horse,human,macaque,orangutan, lincRNA processed_transcript A549@2.30598,AG04450@1.31319,BJ@7.68434,GM12878@1.95333,H1HESC@5.02703,HELAS3@2.21409,HEPG2@0.303366,HMEC@4.62558,HSMM@0.424094,HUVEC@0.448321,K562@0.14159,MCF7@2.54562,NHEK@2.26348,NHLF@2.4523,SKNSHRA@0.090764, 0 0 0 0 ENSG00000244479.1 ENST00000467944.1 chr7:144004238-144040392 5 417 35729 encompassing 1.63 0 0,0,0 0 0,0,0 0 4.67969996361499 0 0 7.89652663102802 0 0 7.0977637213468 0 0 0 chimp,cow,horse,human,macaque,marmoset,orangutan,panda, lincRNA processed_transcript A549@2.30598,AG04450@1.31319,BJ@7.68434,GM12878@1.95333,H1HESC@5.02703,HELAS3@2.21409,HEPG2@0.303366,HMEC@4.62558,HSMM@0.424094,HUVEC@0.448321,K562@0.14159,MCF7@2.54562,NHEK@2.26348,NHLF@2.4523,SKNSHRA@0.090764, 174 2 0 0 ENSG00000244479.1 ENST00000486094.1 chr7:144004241-144052778 6 813 47714 exonic 1.63 0 0,0,0 0 0,0,0 78.2017220172202 3.92392170012994 24.258 97.929889298893 6.31519051012282 24.391 106.945879458795 5.69799220354613 25.515 0 0 chimp,dog,guinea_pig,horse,human,macaque,orangutan,pig, lincRNA processed_transcript A549@2.30598,AG04450@1.31319,BJ@7.68434,GM12878@1.95333,H1HESC@5.02703,HELAS3@2.21409,HEPG2@0.303366,HMEC@4.62558,HSMM@0.424094,HUVEC@0.448321,K562@0.14159,MCF7@2.54562,NHEK@2.26348,NHLF@2.4523,SKNSHRA@0.090764, 0 0 0 0 ENSG00000244479.1 ENST00000475089.1 chr7:144008684-144052796 3 589 43519 exonic -2.74 0 0,0,0 0 0,0,0 107.942275042445 3.84765274937384 24.258 135.173174872666 6.92394126703279 24.391 147.617996604414 6.24724832831637 25.515 0 0 chimp,guinea_pig,horse,human, lincRNA processed_transcript A549@2.30598,AG04450@1.31319,BJ@7.68434,GM12878@1.95333,H1HESC@5.02703,HELAS3@2.21409,HEPG2@0.303366,HMEC@4.62558,HSMM@0.424094,HUVEC@0.448321,K562@0.14159,MCF7@2.54562,NHEK@2.26348,NHLF@2.4523,SKNSHRA@0.090764, 0 0 87 2 ENSG00000244479.1 ENST00000488041.1 chr7:144008976-144053274 4 554 43738 intronic -3.11 0 0,0,0 0 0,0,0 0 5.29075403539257 24.258 0 8.796995747405 24.266 0 8.21516758882436 28.725 0 0 chimp,dog,horse,human,macaque,orangutan,panda,pig, lincRNA processed_transcript A549@2.30598,AG04450@1.31319,BJ@7.68434,GM12878@1.95333,H1HESC@5.02703,HELAS3@2.21409,HEPG2@0.303366,HMEC@4.62558,HSMM@0.424094,HUVEC@0.448321,K562@0.14159,MCF7@2.54562,NHEK@2.26348,NHLF@2.4523,SKNSHRA@0.090764, 0 0 0 0 ENSG00000244479.1 ENST00000478925.1 chr7:144015766-144052244 3 553 35921 exonic 7.61 0 0,1,0 0 0,1,0 75.6745027124774 2.49188496979483 73.536 112.464737793852 3.21842376325826 102.628 64.5750452079566 3.48851646669079 105.719 0 0 cat,chimp,cow,dog,elephant,guinea_pig,horse,human,macaque,marmoset,mouse,opossum,orangutan,panda,pig,rabbit,rat, lincRNA processed_transcript A549@2.30598,AG04450@1.31319,BJ@7.68434,GM12878@1.95333,H1HESC@5.02703,HELAS3@2.21409,HEPG2@0.303366,HMEC@4.62558,HSMM@0.424094,HUVEC@0.448321,K562@0.14159,MCF7@2.54562,NHEK@2.26348,NHLF@2.4523,SKNSHRA@0.090764, 0 0 0 0 ENSG00000244479.1 ENST00000462305.1 chr7:144033861-144052774 4 769 18138 exonic -3.11 0 0,0,0 0 0,0,0 82.6762028608583 1.1040357260999 24.258 103.533159947984 1.05788951372808 24.391 113.065019505852 1.00771860183041 25.515 0 0 chimp,horse,human,macaque,orangutan,pig, lincRNA processed_transcript A549@2.30598,AG04450@1.31319,BJ@7.68434,GM12878@1.95333,H1HESC@5.02703,HELAS3@2.21409,HEPG2@0.303366,HMEC@4.62558,HSMM@0.424094,HUVEC@0.448321,K562@0.14159,MCF7@2.54562,NHEK@2.26348,NHLF@2.4523,SKNSHRA@0.090764, 0 0 0 0 ENSG00000244479.1 ENST00000470435.1 chr7:144040264-144052312 4 598 11444 intergenic -3.11 0 0,1,1 0 0,1,0 0 0.913142257951765 73.536 0 0 102.628 0 0 105.719 0 1 chimp,human,macaque,orangutan, lincRNA processed_transcript A549@2.30598,AG04450@1.31319,BJ@7.68434,GM12878@1.95333,H1HESC@5.02703,HELAS3@2.21409,HEPG2@0.303366,HMEC@4.62558,HSMM@0.424094,HUVEC@0.448321,K562@0.14159,MCF7@2.54562,NHEK@2.26348,NHLF@2.4523,SKNSHRA@0.090764, 0 0 0 0 ENSG00000244479.1 ENST00000468575.1 chr7:144040335-144052494 4 564 11589 exonic -9.76 0 0,1,1 0 0,0,0 42.781914893617 1.72793165933213 63.324 46.1560283687943 1.65570799896454 77.488 48.6950354609929 1.57718526188627 84.509 0 0 chimp,human,macaque,marmoset,orangutan, lincRNA processed_transcript A549@2.30598,AG04450@1.31319,BJ@7.68434,GM12878@1.95333,H1HESC@5.02703,HELAS3@2.21409,HEPG2@0.303366,HMEC@4.62558,HSMM@0.424094,HUVEC@0.448321,K562@0.14159,MCF7@2.54562,NHEK@2.26348,NHLF@2.4523,SKNSHRA@0.090764, 1 96 0 0 ENSG00000231126.1 ENST00000449628.1 chr7:144418749-144423718 2 1936 3031 intronic -7.01 0 0,0,0 0 0,0,0 0 0 0 0 3.74265918838667 0 1.12964876033058 4.70900692840647 0 0 0 chimp,dog,human,macaque,marmoset,orangutan,pig,rabbit, processed_transcript processed_transcript A549@0,AG04450@0.000975,BJ@0,GM12878@0.048317,H1HESC@0.0178065,HELAS3@0.0126285,HEPG2@0.003021,HMEC@0,HSMM@0,HUVEC@0.0979465,K562@0.060112,MCF7@0.0074105,NHEK@0.00137033,NHLF@0,SKNSHRA@0.001043, 0 0 0 0 ENSG00000230746.1 ENST00000422084.1 chr7:145372975-145378462 2 670 4815 intergenic -0.42 0 1,1,1 0 0,0,0 0 0 0 0 1.77196261682243 0 0 3.60373831775701 0 0 0 chimp,human,macaque,marmoset,orangutan, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0.263359,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000236795.1 ENST00000434887.1 chr7:146778026-146794701 4 2141 14528 intronic 2.94 1 0,0,0 0 0,0,0 0 1.39158865638767 0 0 3.35022026431718 0 0 3.51899779735683 0 0 0 chimp,human,macaque,marmoset,orangutan, antisense antisense A549@0,AG04450@0,BJ@0,GM12878@0.003759,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000230190.1 ENST00000448131.1 chr7:147368803-147370235 2 1114 316 intronic -2.71 0 0,0,0 0 0,0,0 48.1463195691203 0 0 14.4281867145422 0 0 15.7558348294434 0 0 0 0 chimp,cow,horse,human,macaque,marmoset,orangutan,pig, sense_intronic sense_intronic A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0.0045405,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0.0117645,NHEK@0,NHLF@0,SKNSHRA@0.003012, 0 0 0 0 ENSG00000228151.1 ENST00000417506.1 chr7:149095295-149098547 2 3118 132 intergenic -1.93 0 0,0,1 0 0,0,0 0 0 0 4.18537524053881 0 0 9.02726106478512 0 0 0 0 chimp,human,macaque,orangutan, antisense antisense A549@0.0039325,AG04450@0,BJ@0,GM12878@0.006809,H1HESC@0.0333745,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0.001319,HUVEC@0.004481,K562@0,MCF7@0.0334125,NHEK@0,NHLF@0,SKNSHRA@0.018932, 0 0 0 0 ENSG00000197558.7 ENST00000262089.4 chr7:149473131-149493165 41 7274 12680 intergenic 106.02 0 0,0,1 0 0,1,1 79.5394555952708 3.88864353312303 0 203.104619191642 7.59148264984227 14.466 274.684630189717 10.0005520504732 18.334 0 0 cat,chimp,cow,dog,elephant,guinea_pig,horse,human,macaque,mouse,orangutan,panda,pig,rabbit,rat, antisense retained_intron A549@0.252778,AG04450@0.0165445,BJ@0.017467,GM12878@0.007781,H1HESC@0.16482,HELAS3@0.0133535,HEPG2@0.0424695,HMEC@0.004788,HSMM@0.0592835,HUVEC@0.25896,K562@0.042045,MCF7@0.548629,NHEK@0.010508,NHLF@0.042721,SKNSHRA@3.08895, 0 0 0 0 ENSG00000197558.7 ENST00000378016.2 chr7:149473131-149531054 109 15474 42233 intergenic 757.15 0 0,0,1 0 0,1,1 79.3520098229288 2.76011649657851 0 235.378182758175 10.4994198849241 14.466 306.905131187799 15.3790874434684 18.334 0 0 cow,rabbit,guinea_pig,cat,chimp,elephant,dog,horse,human,panda,orangutan,macaque,pig,marmoset antisense retained_intron A549@0.252778,AG04450@0.0165445,BJ@0.017467,GM12878@0.007781,H1HESC@0.16482,HELAS3@0.0133535,HEPG2@0.0424695,HMEC@0.004788,HSMM@0.0592835,HUVEC@0.25896,K562@0.042045,MCF7@0.548629,NHEK@0.010508,NHLF@0.042721,SKNSHRA@3.08895, 0 0 0 0 ENSG00000197558.7 ENST00000486824.1 chr7:149473524-149480379 4 552 6297 intergenic 8.55 0 0,0,0 0 0,1,1 253.054347826087 17.1521359377481 9.509 301.079710144928 55.4602191519771 38.293 301.601449275362 75.5720184214705 48.92 0 0 cat,chimp,cow,dog,elephant,guinea_pig,horse,human,macaque,marmoset,mouse,opossum,orangutan,panda,platypus,rabbit,rat, antisense antisense A549@0.252778,AG04450@0.0165445,BJ@0.017467,GM12878@0.007781,H1HESC@0.16482,HELAS3@0.0133535,HEPG2@0.0424695,HMEC@0.004788,HSMM@0.0592835,HUVEC@0.25896,K562@0.042045,MCF7@0.548629,NHEK@0.010508,NHLF@0.042721,SKNSHRA@3.08895, 0 0 0 0 ENSG00000197558.7 ENST00000465080.1 chr7:149475035-149476773 4 486 1246 intergenic 22.35 0 0,1,0 0 0,1,1 179.547325102881 1.62520064205457 38.271 217.716049382716 5.7215088282504 106.441 249.578189300412 7.40048154093098 135.158 0 0 cat,chimp,cow,dog,elephant,guinea_pig,horse,human,macaque,marmoset,mouse,opossum,orangutan,panda,rabbit,rat, antisense antisense A549@0.252778,AG04450@0.0165445,BJ@0.017467,GM12878@0.007781,H1HESC@0.16482,HELAS3@0.0133535,HEPG2@0.0424695,HMEC@0.004788,HSMM@0.0592835,HUVEC@0.25896,K562@0.042045,MCF7@0.548629,NHEK@0.010508,NHLF@0.042721,SKNSHRA@3.08895, 0 0 0 0 ENSG00000197558.7 ENST00000477518.1 chr7:149479955-149481960 5 825 1172 intergenic 10.85 0 0,1,1 0 0,1,1 134.29696969697 12.5546075085324 33.667 228.596363636364 11.4778156996587 29.993 311.433939393939 14.6245733788396 42.194 0 0 cat,chimp,cow,dog,elephant,guinea_pig,horse,human,macaque,marmoset,mouse,opossum,orangutan,panda,pig,platypus,rabbit,rat, antisense antisense A549@0.252778,AG04450@0.0165445,BJ@0.017467,GM12878@0.007781,H1HESC@0.16482,HELAS3@0.0133535,HEPG2@0.0424695,HMEC@0.004788,HSMM@0.0592835,HUVEC@0.25896,K562@0.042045,MCF7@0.548629,NHEK@0.010508,NHLF@0.042721,SKNSHRA@3.08895, 0 0 0 0 ENSG00000197558.7 ENST00000493502.1 chr7:149480359-149481404 3 643 398 intergenic 16.60 0 0,0,0 0 0,1,1 70.9688958009331 27.4020100502513 72.759 158.127527216174 16.7311557788945 94.367 229.676516329704 20.0753768844221 119.856 0 0 cat,chimp,cow,dog,elephant,guinea_pig,horse,human,macaque,marmoset,mouse,opossum,orangutan,panda,pig,rabbit, antisense retained_intron A549@0.252778,AG04450@0.0165445,BJ@0.017467,GM12878@0.007781,H1HESC@0.16482,HELAS3@0.0133535,HEPG2@0.0424695,HMEC@0.004788,HSMM@0.0592835,HUVEC@0.25896,K562@0.042045,MCF7@0.548629,NHEK@0.010508,NHLF@0.042721,SKNSHRA@3.08895, 0 0 0 0 ENSG00000197558.7 ENST00000475488.1 chr7:149483308-149496170 22 7459 5361 intergenic 179.86 0 0,0,0 0 0,1,1 31.3218930151495 3.46409252005223 34.876 92.59873977745 7.76123857489274 600.86 134.403539348438 10.8254057078903 145.349 0 0 chimp,cow,horse,human,macaque,marmoset,orangutan,rabbit, antisense retained_intron A549@0.252778,AG04450@0.0165445,BJ@0.017467,GM12878@0.007781,H1HESC@0.16482,HELAS3@0.0133535,HEPG2@0.0424695,HMEC@0.004788,HSMM@0.0592835,HUVEC@0.25896,K562@0.042045,MCF7@0.548629,NHEK@0.010508,NHLF@0.042721,SKNSHRA@3.08895, 0 0 0 0 ENSG00000197558.7 ENST00000472797.1 chr7:149493481-149497518 6 714 3313 intergenic 1.90 0 0,0,0 0 0,1,1 0 0 11.5 70.5966386554622 2.0223362511319 26.269 178.532212885154 2.16329610624811 42.632 0 0 cat,chimp,cow,dog,elephant,guinea_pig,horse,human,macaque,marmoset,mouse,orangutan,panda,platypus,rabbit,rat, antisense antisense A549@0.252778,AG04450@0.0165445,BJ@0.017467,GM12878@0.007781,H1HESC@0.16482,HELAS3@0.0133535,HEPG2@0.0424695,HMEC@0.004788,HSMM@0.0592835,HUVEC@0.25896,K562@0.042045,MCF7@0.548629,NHEK@0.010508,NHLF@0.042721,SKNSHRA@3.08895, 0 0 0 0 ENSG00000197558.7 ENST00000484709.1 chr7:149498883-149503065 9 1226 2940 intergenic 2.78 0 0,0,0 0 0,1,1 75.5823817292006 2.61394557823129 0 238.072593800979 48.7438775510204 0 291.861337683524 5.62959183673469 0 0 0 cat,chimp,cow,dog,elephant,guinea_pig,horse,human,macaque,marmoset,mouse,opossum,orangutan,panda,rabbit,rat, antisense antisense A549@0.252778,AG04450@0.0165445,BJ@0.017467,GM12878@0.007781,H1HESC@0.16482,HELAS3@0.0133535,HEPG2@0.0424695,HMEC@0.004788,HSMM@0.0592835,HUVEC@0.25896,K562@0.042045,MCF7@0.548629,NHEK@0.010508,NHLF@0.042721,SKNSHRA@3.08895, 0 0 0 0 ENSG00000197558.7 ENST00000481772.1 chr7:149508003-149509723 4 390 1324 intergenic 0 0 0,0,0 0 0,1,1 18.2820512820513 0 1.38 326.564102564103 35.2658610271903 6.897 325.571794871795 48.8141993957704 6.893 0 0 cat,chimp,cow,dog,elephant,guinea_pig,horse,human,macaque,marmoset,mouse,opossum,orangutan,panda,rabbit,rat, antisense antisense A549@0.252778,AG04450@0.0165445,BJ@0.017467,GM12878@0.007781,H1HESC@0.16482,HELAS3@0.0133535,HEPG2@0.0424695,HMEC@0.004788,HSMM@0.0592835,HUVEC@0.25896,K562@0.042045,MCF7@0.548629,NHEK@0.010508,NHLF@0.042721,SKNSHRA@3.08895, 0 0 0 0 ENSG00000197558.7 ENST00000478854.1 chr7:149510866-149513561 8 1024 1657 intergenic -1.53 0 0,1,0 0 0,1,1 87.7060546875 2.95594447797224 0 236.1435546875 11.9728424864212 42.693 322.3447265625 13.3174411587206 42.395 0 0 cat,chimp,cow,dog,elephant,guinea_pig,horse,human,macaque,marmoset,mouse,opossum,orangutan,panda,rabbit,rat, antisense antisense A549@0.252778,AG04450@0.0165445,BJ@0.017467,GM12878@0.007781,H1HESC@0.16482,HELAS3@0.0133535,HEPG2@0.0424695,HMEC@0.004788,HSMM@0.0592835,HUVEC@0.25896,K562@0.042045,MCF7@0.548629,NHEK@0.010508,NHLF@0.042721,SKNSHRA@3.08895, 0 0 0 0 ENSG00000197558.7 ENST00000464974.1 chr7:149514703-149519209 11 1762 2724 intergenic 9.98 0 0,0,0 0 0,1,1 71.3507377979569 1.77092511013216 0 304.564699205448 20.1578560939794 0 398.253688989784 30.5301027900147 0 0 0 cat,chimp,cow,dog,elephant,guinea_pig,horse,human,macaque,marmoset,mouse,opossum,orangutan,panda,pig,platypus,rabbit,rat, antisense antisense A549@0.252778,AG04450@0.0165445,BJ@0.017467,GM12878@0.007781,H1HESC@0.16482,HELAS3@0.0133535,HEPG2@0.0424695,HMEC@0.004788,HSMM@0.0592835,HUVEC@0.25896,K562@0.042045,MCF7@0.548629,NHEK@0.010508,NHLF@0.042721,SKNSHRA@3.08895, 0 0 0 0 ENSG00000197558.7 ENST00000493567.1 chr7:149519194-149531068 19 2590 9248 intergenic 40.57 0 0,1,1 0 0,1,1 79.2687258687259 3.51438148788927 0 247.358687258687 6.03535899653979 136.878 305.344787644788 31.9756704152249 179.484 0 0 cat,chimp,cow,dog,elephant,guinea_pig,horse,human,macaque,marmoset,mouse,opossum,orangutan,panda,rabbit,rat, antisense antisense A549@0.252778,AG04450@0.0165445,BJ@0.017467,GM12878@0.007781,H1HESC@0.16482,HELAS3@0.0133535,HEPG2@0.0424695,HMEC@0.004788,HSMM@0.0592835,HUVEC@0.25896,K562@0.042045,MCF7@0.548629,NHEK@0.010508,NHLF@0.042721,SKNSHRA@3.08895, 0 0 0 0 ENSG00000197558.7 ENST00000461331.1 chr7:149519233-149524980 4 415 5326 intergenic 0 0 0,0,0 0 0,1,1 82.2216867469879 30.1900112654901 0 211.330120481928 77.8924145700338 133.92 360.115662650602 80.6721742395794 174.935 0 0 cat,chimp,cow,dog,elephant,guinea_pig,horse,human,macaque,marmoset,mouse,opossum,orangutan,panda,rabbit,rat, antisense antisense A549@0.252778,AG04450@0.0165445,BJ@0.017467,GM12878@0.007781,H1HESC@0.16482,HELAS3@0.0133535,HEPG2@0.0424695,HMEC@0.004788,HSMM@0.0592835,HUVEC@0.25896,K562@0.042045,MCF7@0.548629,NHEK@0.010508,NHLF@0.042721,SKNSHRA@3.08895, 0 0 0 0 ENSG00000197558.7 ENST00000488835.1 chr7:149519233-149524980 4 493 5248 intergenic -2.88 0 0,0,0 0 0,1,1 87.4584178498986 28.9737042682927 0 196.123732251521 77.3607088414634 133.92 337.448275862069 78.6625381097561 174.935 0 0 cat,chimp,cow,dog,elephant,guinea_pig,horse,human,macaque,marmoset,mouse,opossum,orangutan,panda,rabbit,rat, antisense antisense A549@0.252778,AG04450@0.0165445,BJ@0.017467,GM12878@0.007781,H1HESC@0.16482,HELAS3@0.0133535,HEPG2@0.0424695,HMEC@0.004788,HSMM@0.0592835,HUVEC@0.25896,K562@0.042045,MCF7@0.548629,NHEK@0.010508,NHLF@0.042721,SKNSHRA@3.08895, 0 0 0 0 ENSG00000197558.7 ENST00000492965.1 chr7:149519233-149524980 11 1495 4232 intergenic 14.39 0 0,0,0 0 0,1,1 91.7605351170569 13.3969754253308 0 247.836789297659 30.1980151228733 133.92 328.550501672241 31.1193289224953 174.935 0 0 cat,chimp,cow,dog,elephant,guinea_pig,horse,human,macaque,marmoset,mouse,opossum,orangutan,panda,rabbit,rat, antisense antisense A549@0.252778,AG04450@0.0165445,BJ@0.017467,GM12878@0.007781,H1HESC@0.16482,HELAS3@0.0133535,HEPG2@0.0424695,HMEC@0.004788,HSMM@0.0592835,HUVEC@0.25896,K562@0.042045,MCF7@0.548629,NHEK@0.010508,NHLF@0.042721,SKNSHRA@3.08895, 0 0 0 0 ENSG00000197558.7 ENST00000465639.1 chr7:149521342-149531068 10 3469 6239 intergenic 48.28 0 0,0,1 0 0,1,1 38.2882675122514 0.820323769834909 60.595 150.301527817815 3.63728161564353 96.788 178.237244162583 41.1602820964898 97.788 0 0 chimp,cow,elephant,guinea_pig,horse,human,macaque,orangutan,rabbit,rat, antisense retained_intron A549@0.252778,AG04450@0.0165445,BJ@0.017467,GM12878@0.007781,H1HESC@0.16482,HELAS3@0.0133535,HEPG2@0.0424695,HMEC@0.004788,HSMM@0.0592835,HUVEC@0.25896,K562@0.042045,MCF7@0.548629,NHEK@0.010508,NHLF@0.042721,SKNSHRA@3.08895, 0 0 0 0 ENSG00000197558.7 ENST00000472850.1 chr7:149521651-149531067 12 2530 6864 intergenic 48.28 0 0,0,1 0 0,1,1 47.5422924901186 0.745629370629371 32.994 173.20790513834 10.6574883449883 78.209 234.481422924901 42.8918997668998 83.391 0 0 cat,chimp,cow,dog,elephant,guinea_pig,horse,human,macaque,orangutan,panda,rabbit,rat, antisense retained_intron A549@0.252778,AG04450@0.0165445,BJ@0.017467,GM12878@0.007781,H1HESC@0.16482,HELAS3@0.0133535,HEPG2@0.0424695,HMEC@0.004788,HSMM@0.0592835,HUVEC@0.25896,K562@0.042045,MCF7@0.548629,NHEK@0.010508,NHLF@0.042721,SKNSHRA@3.08895, 0 0 0 0 ENSG00000204934.6 ENST00000488315.1 chr7:149564786-149570931 3 2933 3208 exonic 8.51 0 1,1,1 1 0,1,0 0 0 45.828 0 0 67.39 5.32390044323219 12.8855985037406 70.683 0 1 human,macaque,marmoset,orangutan, lincRNA processed_transcript A549@0.276265,AG04450@0.272309,BJ@0.269168,GM12878@0.056504,H1HESC@0.341826,HELAS3@0.0761415,HEPG2@0.200381,HMEC@0.035797,HSMM@0.103717,HUVEC@0.177664,K562@0.238445,MCF7@0.274528,NHEK@0.058282,NHLF@0.290123,SKNSHRA@2.38224, 0 0 0 0 ENSG00000204934.6 ENST00000461019.1 chr7:149564861-149570934 4 2970 3097 exonic 8.51 1 1,1,1 1 0,1,0 0 0 45.828 0 0 67.39 5.25757575757576 13.3474329996771 70.683 0 1 human,macaque,marmoset,orangutan, lincRNA processed_transcript A549@0.276265,AG04450@0.272309,BJ@0.269168,GM12878@0.056504,H1HESC@0.341826,HELAS3@0.0761415,HEPG2@0.200381,HMEC@0.035797,HSMM@0.103717,HUVEC@0.177664,K562@0.238445,MCF7@0.274528,NHEK@0.058282,NHLF@0.290123,SKNSHRA@2.38224, 0 0 0 0 ENSG00000204934.6 ENST00000464939.1 chr7:149567387-149577699 3 448 9860 exonic 4.01 0 0,1,1 0 0,1,0 0 10.4317444219067 0 0 15.6948275862069 0 0 21.2413793103448 0 0 1 human,macaque,marmoset,orangutan, lincRNA processed_transcript A549@0.276265,AG04450@0.272309,BJ@0.269168,GM12878@0.056504,H1HESC@0.341826,HELAS3@0.0761415,HEPG2@0.200381,HMEC@0.035797,HSMM@0.103717,HUVEC@0.177664,K562@0.238445,MCF7@0.274528,NHEK@0.058282,NHLF@0.290123,SKNSHRA@2.38224, 0 0 0 0 ENSG00000241449.1 ENST00000492054.1 chr7:149737610-149773744 5 568 35558 intergenic -0.88 0 0,0,0 0 0,0,0 0 0.414534000787446 0 0 10.0340007874459 0 10.487676056338 24.3112661004556 0 0 0 chimp,human,rabbit, lincRNA lincRNA A549@0.004911,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0.029433,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0.005133, 146 2 92 2 ENSG00000241449.1 ENST00000493400.1 chr7:149738452-149742181 2 440 3287 intergenic 3.50 1 0,0,0 0 0,0,0 0 0 0 10.75 5.24277456647399 0 10.9863636363636 136.885001521144 0 0 0 chimp,elephant,human,macaque,orangutan, lincRNA lincRNA A549@0.004911,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0.029433,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0.005133, 0 0 0 0 ENSG00000241449.1 ENST00000495144.1 chr7:149759178-149771465 3 695 11588 intergenic 3.11 1 0,1,0 0 0,0,0 0 0 0 0 1.78348291335865 0 0 3.48765964791163 0 0 0 cat,chimp,dog,elephant,horse,human,macaque,marmoset,orangutan,rabbit, lincRNA lincRNA A549@0.004911,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0.029433,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0.005133, 125 2 77 2 ENSG00000249498.1 ENST00000515382.1 chr7:150004701-150010334 2 2825 2806 intronic 8.57 0 0,0,0 0 0,0,0 0 0 0 0 0 0 0 0 0 0 0 NA lincRNA lincRNA A549@0,AG04450@0,BJ@0.0008985,GM12878@0.0280945,H1HESC@0,HELAS3@0.0234975,HEPG2@0.024352,HMEC@0,HSMM@0,HUVEC@0,K562@0.129465,MCF7@0.0170825,NHEK@0.00386133,NHLF@0,SKNSHRA@0.0024825, 0 0 0 0 ENSG00000240449.1 ENST00000488310.1 chr7:150060866-150069679 3 574 8235 exonic 13.52 0 0,1,0 0 0,0,0 97.1689895470383 119.115239829994 251.536 82.2073170731707 73.6899817850638 269.764 49.808362369338 71.9865209471767 200.293 0 0 chimp,cow,dog,elephant,horse,human,macaque,marmoset,orangutan, antisense antisense A549@0.0646955,AG04450@0.045381,BJ@0.0422315,GM12878@0.0995525,H1HESC@0.05339,HELAS3@0.015664,HEPG2@0.007385,HMEC@0,HSMM@0.093767,HUVEC@0.012642,K562@0.257147,MCF7@0.14059,NHEK@0.00915233,NHLF@0.003344,SKNSHRA@0.142076, 0 0 0 0 ENSG00000239377.1 ENST00000497366.1 chr7:150076943-150080973 2 418 3610 intronic -1.46 0 0,0,1 0 0,0,0 0 0 0 11.7535885167464 1.23656509695291 13.754 11.7535885167464 1.77756232686981 13.801 0 0 chimp,guinea_pig,human,macaque,marmoset,orangutan, antisense antisense A549@0.0228115,AG04450@0,BJ@0,GM12878@0.013926,H1HESC@0.0269725,HELAS3@0.012638,HEPG2@0.041855,HMEC@0,HSMM@0.0178165,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000242258.1 ENST00000477392.1 chr7:150130742-150145228 4 2039 12441 intergenic 8.02 0 0,1,1 0 0,0,0 0 0 0 1.75821481118195 0 0 1.84649337910741 0 0 0 0 chimp,human,macaque,marmoset,orangutan, lincRNA processed_transcript A549@0.006343,AG04450@0.00225,BJ@0.011315,GM12878@9.23348,H1HESC@0.0095115,HELAS3@0,HEPG2@0.001065,HMEC@0.002004,HSMM@0.009017,HUVEC@0,K562@0.0025125,MCF7@0,NHEK@0.00417033,NHLF@0,SKNSHRA@0.014802, 0 0 0 0 ENSG00000242258.1 ENST00000486954.1 chr7:150130818-150139980 3 569 8589 intergenic 8.02 0 0,1,1 0 0,0,0 0 0 0 0 0 0 0 0 0 0 0 chimp,human,macaque,marmoset,orangutan, lincRNA processed_transcript A549@0.006343,AG04450@0.00225,BJ@0.011315,GM12878@9.23348,H1HESC@0.0095115,HELAS3@0,HEPG2@0.001065,HMEC@0.002004,HSMM@0.009017,HUVEC@0,K562@0.0025125,MCF7@0,NHEK@0.00417033,NHLF@0,SKNSHRA@0.014802, 0 0 0 0 ENSG00000243433.1 ENST00000479085.1 chr7:150725868-150726841 2 509 462 exonic -11.01 0 0,0,1 0 0,0,0 0 0 0 0 0 18.293 0 0 23.293 0 0 chimp,horse,human,macaque,marmoset,orangutan, antisense antisense A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0.0113905,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0.019761,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000244151.1 ENST00000485974.1 chr7:150771829-150773617 2 1228 558 exonic 18.24 0 1,1,1 0 0,0,0 221.835504885993 177.200716845878 173.409 363.53013029316 206.625448028674 228.764 247.694625407166 527.867383512545 211.372 0 0 cat,chimp,cow,dog,elephant,guinea_pig,horse,human,macaque,marmoset,mouse,orangutan,panda,rabbit,rat, antisense antisense A549@0.281067,AG04450@0.124397,BJ@0.0651735,GM12878@0.237497,H1HESC@0.433366,HELAS3@0.543955,HEPG2@0.464025,HMEC@0.171684,HSMM@0.078393,HUVEC@0.116011,K562@0.436166,MCF7@0.265599,NHEK@0.144464,NHLF@0.039623,SKNSHRA@0.447445, 0 0 0 0 ENSG00000183016.8 ENST00000453127.1 chr7:150887960-150902581 19 2679 11906 intergenic 139.15 0 0,0,0 0 0,0,0 100.441582680105 8.55879388543592 0 221.92459873087 12.7071224592642 6.365 291.39529675252 17.4312951453049 6.46 0 0 chimp,dog,horse,human,macaque,marmoset,mouse,orangutan,panda,rabbit,rat, antisense antisense A549@0.009204,AG04450@0.000873,BJ@0,GM12878@0.0029525,H1HESC@0.0030755,HELAS3@0.013217,HEPG2@0,HMEC@0,HSMM@0.00416,HUVEC@0.0019795,K562@0.00101,MCF7@0.0124755,NHEK@0,NHLF@0,SKNSHRA@0.003679, 0 0 0 0 ENSG00000243018.1 ENST00000466775.1 chr7:150946411-150951476 2 214 4849 intronic -3.45 0 0,1,0 0 0,0,0 148.672897196262 9.42070530006187 461.496 37.2523364485981 37.775623839967 401.623 32.6495327102804 38.8995669210146 429.436 0 0 cat,chimp,dog,human,macaque,marmoset,mouse,orangutan,pig,rat, antisense antisense A549@0,AG04450@0.0298565,BJ@0.0112035,GM12878@0,H1HESC@0,HELAS3@0.0982955,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0.0253265, 0 0 0 0 ENSG00000243836.1 ENST00000489632.1 chr7:151106247-151110440 6 745 3438 intronic -1.77 0 0,0,0 1 0,0,0 0 17.0026178010471 0 0 43.4749854566608 0 0 38.3979057591623 0 0 0 chimp,horse,human,macaque,marmoset,orangutan, antisense antisense A549@0.0030835,AG04450@0,BJ@0,GM12878@0.10853,H1HESC@0.412419,HELAS3@0.0177875,HEPG2@0.323013,HMEC@0.022722,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@1.4448, 0 0 0 0 ENSG00000243836.1 ENST00000480632.1 chr7:151106322-151110134 4 700 3106 intronic -0.80 1 1,1,1 1 0,0,0 0 18.8200257566001 0 0 48.1220218931101 0 0 42.5022537025113 0 0 0 chimp,human,macaque,marmoset,orangutan, antisense antisense A549@0.0030835,AG04450@0,BJ@0,GM12878@0.10853,H1HESC@0.412419,HELAS3@0.0177875,HEPG2@0.323013,HMEC@0.022722,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@1.4448, 0 0 0 0 ENSG00000243836.1 ENST00000466677.1 chr7:151106357-151109187 2 542 2286 intronic -9.35 0 0,1,0 1 0,0,0 0 25.5708661417323 0 0 65.3836395450569 0 0 57.748031496063 0 0 0 chimp,horse,human,macaque,marmoset,orangutan,pig, antisense retained_intron A549@0.0030835,AG04450@0,BJ@0,GM12878@0.10853,H1HESC@0.412419,HELAS3@0.0177875,HEPG2@0.323013,HMEC@0.022722,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@1.4448, 0 0 0 0 ENSG00000243836.1 ENST00000460148.1 chr7:151107648-151109093 3 363 1078 exonic 0.39 0 0,0,0 0 0,0,0 0 0 0 42.4793388429752 4.22077922077922 48.141 45.0936639118457 4.64285714285714 26.309 0 0 chimp,guinea_pig,horse,human,macaque,marmoset,orangutan, antisense retained_intron A549@0.0030835,AG04450@0,BJ@0,GM12878@0.10853,H1HESC@0.412419,HELAS3@0.0177875,HEPG2@0.323013,HMEC@0.022722,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@1.4448, 0 0 0 0 ENSG00000241456.1 ENST00000465549.1 chr7:151124769-151136210 2 562 10877 intronic -4.05 0 0,0,0 0 0,0,0 0 12.5693665532776 0 0 22.323986393307 0 0 29.2393123103797 0 0 0 chimp,human,macaque,orangutan, antisense antisense A549@0.027519,AG04450@0.020996,BJ@0.0344265,GM12878@0,H1HESC@0,HELAS3@0.278555,HEPG2@0.0870555,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0.164808, 0 0 0 0 ENSG00000242048.1 ENST00000481153.1 chr7:151503744-151504728 2 648 334 intronic -1.58 0 0,0,0 0 0,0,0 0 0 0 0 0 3.612 0 0 3.717 0 0 chimp,human,macaque,marmoset,orangutan, antisense antisense A549@0,AG04450@0,BJ@0,GM12878@0.0040855,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0.0116125,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000242048.1 ENST00000462083.1 chr7:151503820-151507558 3 1788 1946 intronic 0.75 0 0,0,0 0 0,0,0 0 0 0 0 6.45940390544707 3.612 0 6.35046248715313 3.717 0 0 chimp,human,marmoset,orangutan, antisense antisense A549@0,AG04450@0,BJ@0,GM12878@0.0040855,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0.0116125,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000239911.1 ENST00000464464.1 chr7:151574127-151575899 3 379 1389 exonic 2.13 0 0,0,0 0 0,0,0 0 9.82001439884809 82.33 8.85224274406333 28.0431965442765 141.914 8.96833773087071 35.0280777537797 132.762 0 0 chimp,elephant,horse,human,macaque,marmoset,orangutan,panda,rabbit, antisense antisense A549@0.0756725,AG04450@0.0021245,BJ@0.009366,GM12878@0.007499,H1HESC@0.100402,HELAS3@0.125982,HEPG2@0.0117615,HMEC@0.011643,HSMM@0.012333,HUVEC@0.006365,K562@0.002201,MCF7@0.226237,NHEK@0,NHLF@0.005528,SKNSHRA@0.143724, 0 0 0 0 ENSG00000239911.1 ENST00000467458.1 chr7:151574550-151576299 2 1053 694 intergenic 2.13 1 1,1,1 0 0,0,0 0 0 78.045 0 5.68443804034582 164.994 0 5.87896253602305 165.213 0 0 cat,chimp,human,macaque,marmoset,orangutan, antisense antisense A549@0.0756725,AG04450@0.0021245,BJ@0.009366,GM12878@0.007499,H1HESC@0.100402,HELAS3@0.125982,HEPG2@0.0117615,HMEC@0.011643,HSMM@0.012333,HUVEC@0.006365,K562@0.002201,MCF7@0.226237,NHEK@0,NHLF@0.005528,SKNSHRA@0.143724, 0 0 0 0 ENSG00000227562.1 ENST00000446340.1 chr7:151647471-151652070 2 583 4014 intergenic -1.79 0 0,0,0 0 0,0,0 0 0 0 0 0 1.488 0 0 1.506 0 0 chimp,human, antisense antisense A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000229591.1 ENST00000424630.1 chr7:151817086-151818802 2 671 1043 exonic 3.31 0 0,1,0 0 0,0,0 0 57.4362416107383 0 28.193740685544 63.0191754554171 24.591 53.026825633383 73.9904122722915 22.111 0 0 chimp,human,macaque,marmoset,orangutan, antisense antisense A549@0.685099,AG04450@0.755401,BJ@0.835317,GM12878@2.49466,H1HESC@0.43364,HELAS3@0.987877,HEPG2@0.73955,HMEC@0.042589,HSMM@0.224469,HUVEC@2.59,K562@1.40868,MCF7@1.18197,NHEK@0.719481,NHLF@0.040364,SKNSHRA@2.41332, 0 0 0 0 ENSG00000234722.2 ENST00000454441.1 chr7:153097005-153109319 4 1003 11305 intergenic 5.15 0 0,0,1 0 0,0,0 0 0 0 0 0 0 0 1.62078726227333 0 0 0 chimp,human,macaque,marmoset,orangutan, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0.0151335,H1HESC@0.0011325,HELAS3@0.094216,HEPG2@0.004558,HMEC@0,HSMM@0,HUVEC@0.181898,K562@25.9781,MCF7@0,NHEK@0,NHLF@0.0045375,SKNSHRA@0, 0 0 0 0 ENSG00000234722.2 ENST00000453187.1 chr7:153102578-153111021 2 428 8013 intergenic -9.06 0 1,1,1 1 0,0,0 0 0 0 0 0 0 0 2.28665917883439 0 0 0 human, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0.0151335,H1HESC@0.0011325,HELAS3@0.094216,HEPG2@0.004558,HMEC@0,HSMM@0,HUVEC@0.181898,K562@25.9781,MCF7@0,NHEK@0,NHLF@0.0045375,SKNSHRA@0, 0 0 0 0 ENSG00000234722.2 ENST00000416982.1 chr7:153108319-153111048 2 2622 105 intergenic 5.15 0 0,1,0 1 0,0,0 0 0 0 0 0 0 0 0 0 0 0 NA lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0.0151335,H1HESC@0.0011325,HELAS3@0.094216,HEPG2@0.004558,HMEC@0,HSMM@0,HUVEC@0.181898,K562@25.9781,MCF7@0,NHEK@0,NHLF@0.0045375,SKNSHRA@0, 0 0 0 0 ENSG00000203335.3 ENST00000454405.1 chr7:153721094-153754712 4 533 33079 intronic -2.68 0 0,0,0 0 0,0,0 21.9887429643527 5.68408960367605 0 0 10.5024033374649 0 0 11.7884156111128 0 0 0 chimp,guinea_pig,human,marmoset,rabbit, antisense antisense A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0.002044,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 146 2 92 2 ENSG00000203335.3 ENST00000446335.1 chr7:153723372-153735689 3 695 11618 intronic 3.11 0 0,0,0 0 0,0,0 0 0 0 0 0.568084007574453 0 0 2.4805474264073 0 0 0 chimp,elephant,horse,human,macaque,marmoset,orangutan,rabbit, antisense antisense A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0.002044,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 125 2 77 2 ENSG00000203335.3 ENST00000366161.2 chr7:153752668-153756231 3 2126 1433 intronic 0.16 0 0,0,0 0 0,0,0 0 20.897418004187 0 2.38664158043274 5.6231681786462 0 2.65569143932267 5.6685275645499 0 0 0 chimp,human,orangutan, antisense antisense A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0.002044,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000203335.3 ENST00000425591.1 chr7:153752670-153756646 2 2468 1506 intronic 0.16 0 0,0,0 0 0,0,0 0 19.8844621513944 0 2.05591572123177 5.35059760956175 0 2.28768233387358 5.3937583001328 0 0 0 chimp,human,orangutan, antisense antisense A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0.002044,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000203335.3 ENST00000542406.1 chr7:153755908-153758033 6 513 1602 intronic -5.35 0 0,0,0 0 0,0,0 0 0 0 0 0 0 0 0 0 0 1 chimp,human,macaque,orangutan, antisense antisense A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0.002044,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000233363.1 ENST00000451116.1 chr7:153789286-153793128 2 3042 798 intronic 4.05 0 0,0,0 0 0,0,0 0 0 0 0 0 0 0 0 0 0 0 chimp,human,marmoset,orangutan, antisense antisense A549@0,AG04450@0,BJ@0,GM12878@0.0017445,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000236408.1 ENST00000448767.1 chr7:154630098-154657193 2 662 26431 intronic 0.87 0 0,0,0 0 0,0,0 0 9.23812946918391 0 1.92598187311178 10.3058529756725 0 2.00151057401813 36.1396844614279 0 0 0 chimp,elephant,horse,human,macaque,marmoset,orangutan,rabbit, antisense antisense A549@0,AG04450@0,BJ@0,GM12878@0.0406895,H1HESC@0,HELAS3@0.007994,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000228521.2 ENST00000454149.2 chr7:154995857-154996899 2 365 675 intergenic 0.65 0 0,1,1 0 0,0,0 0 0 0 0 0 0 0 0 0 0 0 chimp,human,orangutan, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0.02479,HELAS3@0,HEPG2@0.014865,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000225612.1 ENST00000418523.1 chr7:155059009-155059762 3 453 296 intergenic 4.61 0 0,0,1 0 0,0,0 0 0 0 0 0 0 0 0 0 0 0 chimp,human,marmoset,orangutan, lincRNA lincRNA A549@0,AG04450@0,BJ@0.0283865,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000236544.1 ENST00000419225.1 chr7:155213901-155249794 3 531 35358 intergenic -1.23 0 0,1,1 0 0,0,0 77.8907721280603 4.97830759658352 161.246 34.0376647834275 6.3932914757622 579.072 13.8964218455744 8.47601674302845 455.646 0 0 chimp,dog,human,macaque,marmoset,orangutan,pig,rabbit, antisense antisense A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0.004269,HUVEC@0,K562@0,MCF7@0.030461,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000227365.1 ENST00000415333.1 chr7:155302978-155311318 2 466 7872 intronic 0.94 0 0,1,0 0 0,0,0 0 35.1900406504065 78.271 0 25.8036077235772 130.319 0 39.1900406504065 235.863 0 0 chimp,human,macaque,marmoset,orangutan, antisense antisense A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000228569.1 ENST00000426187.1 chr7:156225217-156228527 2 430 2878 intergenic 0 0 0,0,0 0 0,0,0 0 11.2883947185546 0 0 0 0 0 0 3.402 0 0 chimp,human,macaque,marmoset,orangutan, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0.020944,H1HESC@0.0298145,HELAS3@0,HEPG2@0.010073,HMEC@0,HSMM@0.009526,HUVEC@0,K562@0.0056855,MCF7@0.164681,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000233878.1 ENST00000436670.1 chr7:156230483-156238282 3 2695 5100 intergenic 3.73 0 0,1,0 0 0,0,0 11.3283858998145 26.5023529411765 0 36.1469387755102 34.988431372549 0 40.4437847866419 42.5656862745098 0 0 0 chimp,human,macaque, lincRNA lincRNA A549@0,AG04450@0.001746,BJ@0,GM12878@0.012342,H1HESC@0.019667,HELAS3@0,HEPG2@0.0189545,HMEC@0,HSMM@0,HUVEC@0.002206,K562@0.0009925,MCF7@0.185361,NHEK@0.00195733,NHLF@0.0028605,SKNSHRA@0.0050455, 0 0 0 0 ENSG00000182648.7 ENST00000425712.1 chr7:156264890-156395889 2 659 130338 intergenic 0.31 0 0,0,1 0 0,0,0 0 6.40874495542359 50.662 0 7.83674753333641 73.376 0 14.0830532922095 68.546 0 0 chimp,dog,elephant,human,macaque,marmoset,orangutan,panda, processed_transcript processed_transcript A549@0.933965,AG04450@0.662497,BJ@1.57231,GM12878@0.437667,H1HESC@1.47117,HELAS3@0.0093405,HEPG2@0.0357345,HMEC@0.27874,HSMM@0.766024,HUVEC@1.26032,K562@2.51793,MCF7@2.78613,NHEK@0.0288797,NHLF@0.751076,SKNSHRA@1.41079, 0 0 0 0 ENSG00000182648.7 ENST00000447933.1 chr7:156264940-156398458 3 763 132751 intergenic 13.91 0 0,0,1 0 0,0,0 0 6.6738856957763 0 0 8.24703392064844 0 0 14.343417375387 6.804 0 0 cat,chimp,human,marmoset,orangutan, processed_transcript processed_transcript A549@0.933965,AG04450@0.662497,BJ@1.57231,GM12878@0.437667,H1HESC@1.47117,HELAS3@0.0093405,HEPG2@0.0357345,HMEC@0.27874,HSMM@0.766024,HUVEC@1.26032,K562@2.51793,MCF7@2.78613,NHEK@0.0288797,NHLF@0.751076,SKNSHRA@1.41079, 0 0 0 0 ENSG00000241558.1 ENST00000414767.1 chr7:156376854-156398076 3 680 20538 intergenic 1.53 0 0,0,0 0 0,0,0 0 5.68833382023566 0 0 8.75474729769208 0 0 18.9710293115201 0 0 0 chimp,human,macaque,marmoset,orangutan, lincRNA lincRNA A549@0.739065,AG04450@0.208979,BJ@0.196826,GM12878@1.60362,H1HESC@3.60287,HELAS3@0.321332,HEPG2@0.49419,HMEC@0,HSMM@2.35882,HUVEC@0.93875,K562@2.2749,MCF7@2.81937,NHEK@0.0269133,NHLF@1.06519,SKNSHRA@2.82179, 157 2 100 2 ENSG00000241558.1 ENST00000439364.1 chr7:156396312-156398461 3 594 1551 intergenic 13.38 0 0,0,1 0 0,0,0 31.5454545454545 0 0 63.3080808080808 0 0 68.5505050505051 0 6.804 0 0 chimp,human,macaque,marmoset,orangutan, lincRNA lincRNA A549@0.739065,AG04450@0.208979,BJ@0.196826,GM12878@1.60362,H1HESC@3.60287,HELAS3@0.321332,HEPG2@0.49419,HMEC@0,HSMM@2.35882,HUVEC@0.93875,K562@2.2749,MCF7@2.81937,NHEK@0.0269133,NHLF@1.06519,SKNSHRA@2.82179, 0 0 0 0 ENSG00000241558.1 ENST00000417810.1 chr7:156397826-156398438 2 334 276 intergenic 12.90 0 0,0,1 0 0,0,0 0 0 0 0 0 0 0 0 6.804 0 0 chimp,human,macaque,marmoset,orangutan, lincRNA lincRNA A549@0.739065,AG04450@0.208979,BJ@0.196826,GM12878@1.60362,H1HESC@3.60287,HELAS3@0.321332,HEPG2@0.49419,HMEC@0,HSMM@2.35882,HUVEC@0.93875,K562@2.2749,MCF7@2.81937,NHEK@0.0269133,NHLF@1.06519,SKNSHRA@2.82179, 0 0 0 0 ENSG00000182648.7 ENST00000440711.1 chr7:156397826-156398438 2 334 276 intergenic 12.90 0 0,0,1 0 0,0,0 0 0 0 0 0 0 0 0 6.804 1 1 chimp,human,macaque,marmoset,orangutan, processed_transcript processed_transcript A549@0.933965,AG04450@0.662497,BJ@1.57231,GM12878@0.437667,H1HESC@1.47117,HELAS3@0.0093405,HEPG2@0.0357345,HMEC@0.27874,HSMM@0.766024,HUVEC@1.26032,K562@2.51793,MCF7@2.78613,NHEK@0.0288797,NHLF@0.751076,SKNSHRA@1.41079, 157 2 100 2 ENSG00000224903.1 ENST00000455709.1 chr7:156446879-156450387 2 740 2766 exonic 0.61 0 0,0,1 0 0,0,0 10.6581081081081 0 37.232 43.0216216216216 5.09508315256688 105.008 72.2135135135135 13.3629790310918 147.617 0 0 chimp,human,macaque,marmoset,mouse,orangutan, antisense antisense A549@0.754139,AG04450@0.220742,BJ@0.0341475,GM12878@0.785988,H1HESC@0.176629,HELAS3@0.863129,HEPG2@0.870467,HMEC@0.016555,HSMM@0.005845,HUVEC@0.485645,K562@0.604797,MCF7@2.15455,NHEK@0.139282,NHLF@0.0026005,SKNSHRA@1.21253, 0 0 0 0 ENSG00000225666.1 ENST00000430825.1 chr7:156461646-156469257 2 512 7097 exonic 1.85 0 0,0,1 0 0,0,0 0 0 20.7 33.0859375 2.58996759194026 17.974 60.546875 4.40115541778216 273.252 0 0 chimp,human,macaque,orangutan, antisense antisense A549@0.820202,AG04450@0.23255,BJ@0.233761,GM12878@0.992717,H1HESC@0.846285,HELAS3@2.56787,HEPG2@2.55014,HMEC@0.380979,HSMM@0.0644815,HUVEC@1.17658,K562@2.51389,MCF7@1.48617,NHEK@0.544236,NHLF@0.105869,SKNSHRA@1.72742, 0 0 0 0 ENSG00000230033.1 ENST00000427073.1 chr7:156737415-156738339 2 529 393 intergenic -0.29 0 0,1,0 0 0,0,0 0 0 0 0 0 0 0 0 0 0 0 chimp,human,macaque,marmoset,orangutan, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0.0078135,HELAS3@0,HEPG2@0.0122075,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000235029.1 ENST00000429228.1 chr7:156799001-156799826 2 372 451 intronic 4.13 0 0,1,1 0 0,0,0 0 172.638580931264 73.096 0 214.585365853659 98.032 0 236.383592017738 133.91 0 0 chimp,human,macaque,marmoset,orangutan, antisense antisense A549@0,AG04450@0,BJ@0.006583,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0.149564,HMEC@0.010948,HSMM@0,HUVEC@0,K562@0.0124165,MCF7@0.0164925,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000243479.3 ENST00000480284.1 chr7:156803499-156809120 2 1039 4580 intergenic -0.28 1 1,1,1 0 0,0,0 5.59576515880654 3.7292576419214 113.026 0 10.7379912663755 175.568 1.93262752646776 12.5412663755459 302.609 0 0 chimp,human,macaque,orangutan, antisense antisense A549@2.0293,AG04450@0,BJ@0,GM12878@0.937221,H1HESC@0.065931,HELAS3@0.755934,HEPG2@0.791794,HMEC@1.23739,HSMM@0,HUVEC@0.0402885,K562@0.656385,MCF7@2.28665,NHEK@0.11801,NHLF@0.009322,SKNSHRA@0.0053425, 0 0 0 0 ENSG00000236102.2 ENST00000426169.2 chr7:156850403-156851208 2 430 373 intergenic 2.80 0 0,0,0 0 0,0,0 169.66511627907 0 0 190.790697674419 48.7774798927614 0 225.351162790698 130.86327077748 0 0 0 cat,chimp,cow,dog,elephant,guinea_pig,horse,human,macaque,marmoset,mouse,opossum,orangutan,panda,pig,platypus,rabbit,rat, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000229660.1 ENST00000442017.1 chr7:157074230-157075380 2 563 585 intergenic -12.44 0 0,1,0 0 0,0,0 0 0 0 0 0 0 9.6607460035524 0 0 0 0 chimp,human,macaque,marmoset,orangutan, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0.060598,HEPG2@0.088786,HMEC@0.054713,HSMM@0.032277,HUVEC@0,K562@0,MCF7@0.0737645,NHEK@0.0511423,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000234210.1 ENST00000444158.1 chr7:157258925-157292410 4 4045 29434 intergenic 8.56 1 0,0,1 0 0,0,0 0 4.33620982537202 0 1.26823238566131 6.40504178840796 6.38 10.316934487021 22.5896242440715 20.911 0 0 human,macaque,orangutan, lincRNA lincRNA A549@0.0051795,AG04450@0.0016605,BJ@0.016272,GM12878@0.005778,H1HESC@0.015507,HELAS3@0.0062745,HEPG2@0.0053895,HMEC@0,HSMM@0.012122,HUVEC@0,K562@0,MCF7@0.0465835,NHEK@0.00754833,NHLF@0,SKNSHRA@0.022475, 0 0 0 0 ENSG00000223872.1 ENST00000449903.1 chr7:157294016-157296271 3 543 1708 intergenic 4.44 0 0,0,0 0 0,0,0 0 0 0 0 0 0 0 0 101.491 0 0 chimp,human,marmoset,orangutan, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0.007599,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0.180783,NHEK@0,NHLF@0,SKNSHRA@0.0041555, 0 0 0 0 ENSG00000233191.1 ENST00000433660.1 chr7:157305988-157309535 3 289 3254 intergenic 0.22 0 0,1,0 0 0,0,0 0 0 0 0 0 0 0 0 0 0 0 chimp,human,macaque,marmoset,orangutan, antisense antisense A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0.0169485,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0.031325,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000231515.1 ENST00000448541.1 chr7:157531702-157533148 2 611 833 intronic 4.44 0 0,1,0 0 0,0,0 0 0 0 0 0 2.151 0 0 2.673 0 0 chimp,human,macaque,marmoset,orangutan, sense_intronic sense_intronic A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0.049285,HEPG2@0.0095135,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000233038.1 ENST00000436151.1 chr7:157647221-157650544 3 1111 2208 intronic 1.71 0 0,0,0 0 0,0,0 0 0 0 0 0 0 0 0 0 0 0 chimp,human,macaque, antisense antisense A549@0.000642,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000233038.1 ENST00000438047.1 chr7:157647277-157658784 4 4298 7203 intronic 10.52 0 0,1,0 0 0,0,0 0 0 0 0 7.97889768152159 0 0 93.192003331945 0 0 0 chimp,human,orangutan, antisense antisense A549@0.000642,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000233038.1 ENST00000434059.1 chr7:157647300-157650274 2 559 2413 intronic 2.78 0 0,1,0 0 0,0,0 0 0 0 0 0 0 0 0 0 0 0 chimp,human,macaque,marmoset,orangutan, antisense antisense A549@0.000642,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000233038.1 ENST00000443338.1 chr7:157647492-157655703 2 541 7668 intronic 4.25 0 0,0,0 0 0,0,0 0 0 0 0 7.49504434011476 0 0 87.5406885758998 0 0 0 chimp,human,macaque,orangutan, antisense antisense A549@0.000642,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000231980.1 ENST00000436489.1 chr7:157820065-157823820 2 3598 155 intronic 8.79 0 0,0,0 0 0,0,0 0 0 0 0 0 0 3.60922734852696 0 0 0 0 human, antisense antisense A549@0.0051735,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0.00397933,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000225365.1 ENST00000448698.1 chr7:158330187-158332571 2 587 1795 intronic 5.62 0 0,0,0 0 0,0,0 0 0 0 0 1.93426183844011 0 0 4.49470752089137 0 0 0 chimp,horse,human,macaque,marmoset,orangutan, antisense antisense A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0.0354335,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0.187599,NHEK@0.0132303,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000232715.1 ENST00000415652.1 chr7:158383321-158383812 2 392 97 intergenic 4.61 0 0,0,0 0 0,0,0 0 0 0 0 0 0 0 0 0 0 0 human,macaque,marmoset,orangutan, antisense antisense A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0.0722275,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0.010437,NHEK@0,NHLF@0,SKNSHRA@0.0546135, 0 0 0 0 ENSG00000231419.2 ENST00000417032.1 chr7:158799213-158801480 2 544 1721 intergenic 0.38 0 0,0,0 0 0,0,0 0 0 0 0 0 0 34.6047794117647 8.99418942475305 136.906 0 0 human,macaque,marmoset,orangutan,rat, lincRNA processed_transcript A549@0.0658905,AG04450@0,BJ@0.0079145,GM12878@0.000765,H1HESC@0.012698,HELAS3@1.76063,HEPG2@0.662353,HMEC@0.108584,HSMM@0.866531,HUVEC@0.004826,K562@2.68236,MCF7@0.197123,NHEK@0.00152933,NHLF@0.0009955,SKNSHRA@0.000574, 0 0 0 0 ENSG00000231419.2 ENST00000447563.1 chr7:158801045-158815371 4 3820 10500 intergenic 7.63 1 0,0,1 0 0,0,0 0 1.57057142857143 0 2.55759162303665 0.209333333333333 0 12.5306282722513 40.2328571428571 10.619 0 0 human,orangutan, lincRNA processed_transcript A549@0.0658905,AG04450@0,BJ@0.0079145,GM12878@0.000765,H1HESC@0.012698,HELAS3@1.76063,HEPG2@0.662353,HMEC@0.108584,HSMM@0.866531,HUVEC@0.004826,K562@2.68236,MCF7@0.197123,NHEK@0.00152933,NHLF@0.0009955,SKNSHRA@0.000574, 0 0 0 0 ENSG00000231419.2 ENST00000438049.1 chr7:158801112-158818929 5 3941 13868 intergenic 7.63 1 0,0,0 0 0,0,0 0 1.18914046726276 0 2.47906622684598 0.158494375540813 0 12.1459020553159 36.648182867032 10.619 0 0 human,orangutan, lincRNA processed_transcript A549@0.0658905,AG04450@0,BJ@0.0079145,GM12878@0.000765,H1HESC@0.012698,HELAS3@1.76063,HEPG2@0.662353,HMEC@0.108584,HSMM@0.866531,HUVEC@0.004826,K562@2.68236,MCF7@0.197123,NHEK@0.00152933,NHLF@0.0009955,SKNSHRA@0.000574, 0 0 0 0 ENSG00000231419.2 ENST00000413238.1 chr7:158810099-158822886 4 4680 8101 exonic 7.27 1 0,0,0 0 0,0,0 0 0 0 2.17435897435897 0.27132452783607 0 10.0326923076923 61.0923342797185 0 0 0 human,macaque,marmoset,orangutan, lincRNA processed_transcript A549@0.0658905,AG04450@0,BJ@0.0079145,GM12878@0.000765,H1HESC@0.012698,HELAS3@1.76063,HEPG2@0.662353,HMEC@0.108584,HSMM@0.866531,HUVEC@0.004826,K562@2.68236,MCF7@0.197123,NHEK@0.00152933,NHLF@0.0009955,SKNSHRA@0.000574, 0 0 0 0 ENSG00000255412.1 ENST00000523195.2 chr8:329590-333174 3 869 2711 intergenic 1.65 0 0,0,0 0 0,1,0 0 0 0 0 6.19660641829583 0 0 14.6108447067503 0 1 1 chimp,human,macaque,marmoset,orangutan, processed_transcript processed_transcript A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0.0820037,NHLF@0.001129,SKNSHRA@0, 0 0 0 0 ENSG00000254207.1 ENST00000520760.1 chr8:675188-675877 2 314 373 intronic 4.85 0 0,0,0 0 0,0,0 0 0 0 0 0 0 0 0 0 0 1 chimp,human, sense_intronic sense_intronic A549@0.404587,AG04450@0.123838,BJ@0.161654,GM12878@0.036204,H1HESC@0.080659,HELAS3@0.252099,HEPG2@0.531778,HMEC@0,HSMM@0,HUVEC@0,K562@0.037772,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0.10478, 0 0 0 0 ENSG00000237647.3 ENST00000522092.1 chr8:687651-1087777 4 807 399313 encompassing 4.65 0 0,1,1 0 0,1,0 18.7360594795539 1.45583038869258 0 66.0991325898389 1.62709453486363 17.875 62.2453531598513 17.1087467725819 27.683 0 0 chimp,dog,guinea_pig,human,macaque,marmoset,opossum,panda,pig,rat, lincRNA processed_transcript A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0.121199,HELAS3@0.0055005,HEPG2@0.0012475,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000237647.3 ENST00000520816.1 chr8:687664-704258 2 963 15629 intergenic 1.50 0 0,1,0 0 0,0,0 0 12.2287414421908 0 12.5555555555556 12.1476102117858 20.982 8.85565939771547 15.4808369057521 27.683 0 0 cat,chimp,horse,human,macaque,marmoset,orangutan, lincRNA processed_transcript A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0.121199,HELAS3@0.0055005,HEPG2@0.0012475,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000237647.3 ENST00000524139.1 chr8:833198-982931 4 1740 147987 encompassing 1.62 0 0,0,1 0 0,1,0 8.68965517241379 0.279261016170339 0 18.5034482758621 0.601715015508119 0 19.3827586206897 28.483292451364 130.856 0 1 human,macaque,orangutan, lincRNA processed_transcript A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0.121199,HELAS3@0.0055005,HEPG2@0.0012475,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000254269.1 ENST00000520524.1 chr8:1054882-1212580 3 378 157316 intergenic 3.86 0 0,1,0 0 0,0,0 25.9047619047619 0.466958224211142 0 34.3386243386243 1.19910880012205 0 40.7195767195767 21.3342380940273 0 1 1 chimp,human,macaque,marmoset,orangutan, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000254160.1 ENST00000517950.1 chr8:1196789-1198760 3 443 1524 intergenic -4.08 0 0,1,0 0 0,0,0 0 0 0 0 0 0 218.805869074492 440.121391076116 0 0 0 chimp,elephant,human,macaque,marmoset,orangutan, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000254269.1 ENST00000522989.1 chr8:1200373-1212580 4 535 11666 intergenic 1.25 0 0,1,0 0 0,0,0 18.3028037383178 1.82547574147094 0 24.2616822429907 3.87347848448483 0 28.7700934579439 34.2349562832162 0 1 1 chimp,human,macaque,marmoset,orangutan, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000254269.1 ENST00000522626.1 chr8:1209579-1212580 2 394 2605 intergenic -4.33 0 0,1,0 0 0,0,0 0 5.12092130518234 18.36 0 16.1957773512476 16.688 0 18.3301343570058 28.379 1 1 chimp,human,macaque,marmoset,orangutan, lincRNA retained_intron A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000253640.1 ENST00000521186.1 chr8:1244292-1250829 3 3011 3522 intergenic 8.63 0 0,0,1 0 0,0,0 0 0 0 0 2.59284497444634 0 0 27.9835320840432 0 0 1 chimp,human,macaque,orangutan, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0.000881,H1HESC@0,HELAS3@0.001761,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0.000886,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000253267.1 ENST00000518063.1 chr8:1513675-1568701 3 584 54438 exonic -2.73 0 0,0,0 0 0,0,0 3.63013698630137 0.374830081928065 0 20.7996575342466 0.93592710973952 0 42.8938356164384 29.3001028693192 0 0 1 chimp,human,marmoset,orangutan, antisense antisense A549@0,AG04450@0,BJ@0,GM12878@0.001295,H1HESC@0,HELAS3@0,HEPG2@0.001202,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000253267.1 ENST00000518009.1 chr8:1552718-1570583 4 1806 16053 intronic 6.32 0 0,0,0 0 0,0,0 0 0 0 0 0 0 0 0 0 0 1 chimp,human,marmoset,orangutan, antisense antisense A549@0,AG04450@0,BJ@0,GM12878@0.001295,H1HESC@0,HELAS3@0,HEPG2@0.001202,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000253982.1 ENST00000518822.1 chr8:1710156-1712505 2 976 1371 intronic 0.28 0 0,1,0 0 0,0,0 0 0 0 0 0 0 0 50.5390226112327 0 1 1 chimp,human,macaque,marmoset,orangutan, antisense antisense A549@3.83603,AG04450@3.24944,BJ@3.66338,GM12878@0.885421,H1HESC@2.55559,HELAS3@0.96448,HEPG2@1.48733,HMEC@1.3893,HSMM@3.21524,HUVEC@4.19846,K562@1.39776,MCF7@1.34861,NHEK@1.29595,NHLF@2.18615,SKNSHRA@5.38959, 0 0 0 0 ENSG00000253982.1 ENST00000517959.1 chr8:1710247-1712668 2 915 1504 intronic 0.28 0 0,1,0 1 0,0,0 0 0 0 0 0 5.497 0 46.0698138297872 5.957 1 1 chimp,human,macaque,marmoset,orangutan, antisense antisense A549@3.83603,AG04450@3.24944,BJ@3.66338,GM12878@0.885421,H1HESC@2.55559,HELAS3@0.96448,HEPG2@1.48733,HMEC@1.3893,HSMM@3.21524,HUVEC@4.19846,K562@1.39776,MCF7@1.34861,NHEK@1.29595,NHLF@2.18615,SKNSHRA@5.38959, 0 0 0 0 ENSG00000253982.1 ENST00000518481.1 chr8:1710791-1711463 2 577 93 intergenic 0.28 0 1,1,1 1 0,0,0 0 0 0 0 0 0 0 0 69.289 1 1 chimp,human,macaque,marmoset,orangutan, antisense antisense A549@3.83603,AG04450@3.24944,BJ@3.66338,GM12878@0.885421,H1HESC@2.55559,HELAS3@0.96448,HEPG2@1.48733,HMEC@1.3893,HSMM@3.21524,HUVEC@4.19846,K562@1.39776,MCF7@1.34861,NHEK@1.29595,NHLF@2.18615,SKNSHRA@5.38959, 0 0 0 0 ENSG00000230340.2 ENST00000399125.3 chr8:1774313-1784348 2 1499 8534 intronic -0.16 0 0,1,0 0 0,0,0 0 0 0 0 0.464963674712913 6.468 0 13.1540895242559 6.688 0 1 chimp,human,marmoset,orangutan, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0.0038965,H1HESC@0.001939,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0.003558,K562@0,MCF7@0,NHEK@0.0328597,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000253696.1 ENST00000518539.1 chr8:1919563-1924610 3 778 4265 intronic -1.51 0 0,0,1 0 0,0,0 0 0 0 0 0 19.087 7.96272493573265 0 19.567 0 0 chimp,dog,horse,human,macaque,marmoset,orangutan,panda, processed_transcript processed_transcript A549@0.264563,AG04450@0,BJ@0.059834,GM12878@0,H1HESC@0.17498,HELAS3@0.031711,HEPG2@0,HMEC@0,HSMM@0.0041505,HUVEC@0.00533,K562@0,MCF7@0.106962,NHEK@0,NHLF@0,SKNSHRA@0.0786555, 0 0 0 0 ENSG00000253764.1 ENST00000517676.1 chr8:1920736-1921776 2 555 483 intergenic -0.54 0 0,1,0 0 0,0,0 0 0 0 0 0 0 0 0 0 1 1 chimp,human,macaque,marmoset,orangutan, antisense antisense A549@0.0730385,AG04450@0,BJ@0,GM12878@0,H1HESC@0.0098725,HELAS3@0.010155,HEPG2@0,HMEC@0,HSMM@0.0051225,HUVEC@0,K562@0,MCF7@0.015449,NHEK@0,NHLF@0,SKNSHRA@0.0507325, 0 0 0 0 ENSG00000253764.1 ENST00000521498.1 chr8:1920987-1922803 3 442 1370 intronic 1.13 0 0,1,1 0 0,0,0 0 0 0 0 0 0 0 0 0 1 1 chimp,human,macaque,marmoset,orangutan, antisense antisense A549@0.0730385,AG04450@0,BJ@0,GM12878@0,H1HESC@0.0098725,HELAS3@0.010155,HEPG2@0,HMEC@0,HSMM@0.0051225,HUVEC@0,K562@0,MCF7@0.015449,NHEK@0,NHLF@0,SKNSHRA@0.0507325, 0 0 0 0 ENSG00000253805.1 ENST00000517731.1 chr8:1981650-1983729 2 410 1667 intergenic -2.00 0 0,1,0 0 0,0,0 0 0 0 0 1.04139172165567 0 0 1.05398920215957 0 0 1 chimp,human,macaque,orangutan, lincRNA lincRNA A549@0.008186,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000254304.1 ENST00000518316.1 chr8:2104674-2142690 5 1207 36801 intergenic 2.87 0 0,0,0 0 0,0,0 0 1.41365723757507 0 9.2162386081193 2.81967881307573 0 11.7439933719967 6.28417706040597 0 0 0 cat,chimp,elephant,human,macaque,orangutan,panda, processed_transcript processed_transcript A549@0,AG04450@0,BJ@0,GM12878@0.001491,H1HESC@0.0020255,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0.0003935,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000253444.1 ENST00000522799.1 chr8:2350992-2369693 3 509 18188 intergenic 1.75 0 0,0,0 0 0,0,0 0 0 0 0 0.897020013195513 0 0 16.8847591818782 0 0 1 chimp,human,orangutan, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0.008515,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000253855.1 ENST00000520162.1 chr8:2376124-2379308 3 556 2624 intergenic 1.39 0 0,0,0 0 0,0,0 0 0 40.672 0 0 4.39 0 0 4.658 1 1 chimp,human,macaque,marmoset,orangutan, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000249694.2 ENST00000515276.2 chr8:2447076-2480453 5 1700 31669 intergenic 10.47 0 0,0,1 0 0,0,0 0 0 0 0 0.482964413148505 0 0 0.782279200479965 73.023 1 1 chimp,human,macaque,marmoset,orangutan, lincRNA processed_transcript A549@0,AG04450@0.0168935,BJ@0,GM12878@0.072128,H1HESC@0.024266,HELAS3@0,HEPG2@0,HMEC@0.002406,HSMM@0,HUVEC@0,K562@0.272685,MCF7@0,NHEK@0.0454243,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000249694.2 ENST00000523394.1 chr8:2447076-2480453 5 1697 31672 intergenic 10.47 0 0,0,1 0 0,0,0 0 0 0 0 0.482918666329881 0 0 0.78220510229856 73.023 1 1 chimp,human,macaque,marmoset,orangutan, lincRNA processed_transcript A549@0,AG04450@0.0168935,BJ@0,GM12878@0.072128,H1HESC@0.024266,HELAS3@0,HEPG2@0,HMEC@0.002406,HSMM@0,HUVEC@0,K562@0.272685,MCF7@0,NHEK@0.0454243,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000254319.1 ENST00000523971.1 chr8:2523591-2585991 4 573 61821 intergenic -4.17 0 1,1,1 0 0,0,0 0 4.21516960256224 0 0 3.62907426279096 0 0 9.96143705213439 0 1 1 chimp,human,macaque,marmoset,orangutan, lincRNA lincRNA A549@0,AG04450@0.409377,BJ@0.059285,GM12878@2.25831,H1HESC@0,HELAS3@0.0217025,HEPG2@0,HMEC@0.028262,HSMM@0.007138,HUVEC@0.020984,K562@4.89657,MCF7@0,NHEK@0.009196,NHLF@0.0777225,SKNSHRA@0, 0 0 0 0 ENSG00000254319.1 ENST00000519393.1 chr8:2523614-2585929 5 559 61748 intergenic 4.96 0 0,1,0 0 0,0,0 0 4.22015287944549 0 0 3.63336464338926 0 0 9.97321370732655 0 1 1 chimp,human,macaque,marmoset,orangutan, lincRNA lincRNA A549@0,AG04450@0.409377,BJ@0.059285,GM12878@2.25831,H1HESC@0,HELAS3@0.0217025,HEPG2@0,HMEC@0.028262,HSMM@0.007138,HUVEC@0.020984,K562@4.89657,MCF7@0,NHEK@0.009196,NHLF@0.0777225,SKNSHRA@0, 0 0 0 0 ENSG00000254319.1 ENST00000517357.1 chr8:2527314-2585959 5 564 58073 intergenic -2.08 0 0,1,1 0 0,0,0 0 4.48721436812288 0 0 3.76818831470735 0 0 10.5016444819451 0 1 1 chimp,human,macaque,marmoset,orangutan, lincRNA lincRNA A549@0,AG04450@0.409377,BJ@0.059285,GM12878@2.25831,H1HESC@0,HELAS3@0.0217025,HEPG2@0,HMEC@0.028262,HSMM@0.007138,HUVEC@0.020984,K562@4.89657,MCF7@0,NHEK@0.009196,NHLF@0.0777225,SKNSHRA@0, 0 0 0 0 ENSG00000254319.1 ENST00000517984.1 chr8:2527341-2585959 5 557 58053 intergenic 4.96 0 0,1,1 0 0,0,0 0 4.48876027078704 0 0 3.76948650371213 0 0 10.5052624326047 0 0 0 chimp,human,macaque,marmoset,pig, lincRNA lincRNA A549@0,AG04450@0.409377,BJ@0.059285,GM12878@2.25831,H1HESC@0,HELAS3@0.0217025,HEPG2@0,HMEC@0.028262,HSMM@0.007138,HUVEC@0.020984,K562@4.89657,MCF7@0,NHEK@0.009196,NHLF@0.0777225,SKNSHRA@0, 0 0 0 0 ENSG00000254319.1 ENST00000520842.1 chr8:2554056-2585957 3 574 31323 intergenic 3.17 1 1,1,1 0 0,0,0 0 5.94282156881525 0 0 3.67975608977429 0 0 15.7461609679788 0 0 0 chimp,horse,human,macaque,orangutan, lincRNA lincRNA A549@0,AG04450@0.409377,BJ@0.059285,GM12878@2.25831,H1HESC@0,HELAS3@0.0217025,HEPG2@0,HMEC@0.028262,HSMM@0.007138,HUVEC@0.020984,K562@4.89657,MCF7@0,NHEK@0.009196,NHLF@0.0777225,SKNSHRA@0, 0 0 0 0 ENSG00000254319.1 ENST00000520570.1 chr8:2558974-2585957 3 579 26400 intergenic 5.15 0 1,1,1 0 0,0,0 0 5.65962121212121 0 0 3.74681818181818 0 0 17.6442045454545 0 0 0 chimp,elephant,human,macaque,orangutan, lincRNA lincRNA A549@0,AG04450@0.409377,BJ@0.059285,GM12878@2.25831,H1HESC@0,HELAS3@0.0217025,HEPG2@0,HMEC@0.028262,HSMM@0.007138,HUVEC@0.020984,K562@4.89657,MCF7@0,NHEK@0.009196,NHLF@0.0777225,SKNSHRA@0, 0 0 0 0 ENSG00000253853.1 ENST00000520024.1 chr8:2584858-2680004 5 605 94533 intergenic -1.93 0 0,1,0 1 0,0,0 0 0.759734695820507 0 0 0.840500142807274 0 0 3.50420488083526 0 1 1 chimp,human,macaque,marmoset,orangutan, lincRNA lincRNA A549@0,AG04450@0.197641,BJ@0.016006,GM12878@1.3757,H1HESC@0,HELAS3@0.004351,HEPG2@0,HMEC@0.067125,HSMM@0,HUVEC@0,K562@3.41738,MCF7@0,NHEK@0,NHLF@0.038029,SKNSHRA@0, 0 0 0 0 ENSG00000253162.1 ENST00000520815.1 chr8:3230875-3232748 2 461 1410 intronic -1.33 0 0,0,1 0 0,0,0 0 0 0 0 0 0 0 0 0 0 0 cat,chimp,guinea_pig,horse,human,macaque,marmoset,mouse,orangutan,rabbit, sense_intronic sense_intronic A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000253510.1 ENST00000517807.1 chr8:5363590-5366648 1 3058 0 intergenic 4.51 1 0,0,0 0 0,0,0 0 0 0 0 0 0 0 0 0 1 1 chimp,human,macaque,marmoset,orangutan, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000254007.1 ENST00000518926.1 chr8:5517201-5527599 3 920 9474 intergenic -0.24 0 0,0,0 0 0,0,0 0 1.54443740764197 0 0 2.55773696432341 0 0 4.52501583280557 0 1 1 chimp,human,macaque,marmoset,orangutan, lincRNA lincRNA A549@0.0206005,AG04450@0,BJ@0,GM12878@0,H1HESC@0.00899,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000253189.1 ENST00000523090.1 chr8:5893955-5894496 3 328 209 intergenic 0 0 0,1,0 0 0,0,0 0 0 0 13.4359756097561 0 6.102 13.9512195121951 0 6.336 1 1 chimp,human,macaque,marmoset,orangutan, lincRNA lincRNA A549@0.0166895,AG04450@0,BJ@0,GM12878@0.0131715,H1HESC@0,HELAS3@0.007061,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0.012148,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000253880.1 ENST00000519555.1 chr8:5901875-6115058 5 569 212606 intergenic 2.37 0 0,1,0 0 0,0,0 0 2.27875506806017 0 0 4.80223512036349 0 0 8.92592871320659 0 0 1 chimp,human,macaque,orangutan, lincRNA lincRNA A549@0.031189,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0.083862,HEPG2@0.038923,HMEC@0,HSMM@0,HUVEC@0,K562@0.0080905,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000246089.2 ENST00000500118.2 chr8:6261072-6264069 2 2411 584 intergenic 1.87 0 1,1,1 1 0,0,0 0 0 0 0 0 2.976 0 0 3.108 0 1 chimp,human,orangutan, lincRNA processed_transcript A549@0.301831,AG04450@0.274122,BJ@0.29263,GM12878@0.58651,H1HESC@2.79479,HELAS3@1.73302,HEPG2@1.11318,HMEC@0.593468,HSMM@0.136672,HUVEC@0.468919,K562@1.19221,MCF7@0.289619,NHEK@0.480245,NHLF@0.144067,SKNSHRA@0.978455, 0 0 0 0 ENSG00000246089.2 ENST00000523225.1 chr8:6263118-6264663 3 1014 527 exonic 4.20 0 0,1,1 1 0,0,0 0 0 0 2.93491124260355 0 0 3.06508875739645 0 0 0 0 chimp,human,macaque,marmoset,orangutan,panda, lincRNA processed_transcript A549@0.301831,AG04450@0.274122,BJ@0.29263,GM12878@0.58651,H1HESC@2.79479,HELAS3@1.73302,HEPG2@1.11318,HMEC@0.593468,HSMM@0.136672,HUVEC@0.468919,K562@1.19221,MCF7@0.289619,NHEK@0.480245,NHLF@0.144067,SKNSHRA@0.978455, 0 0 0 0 ENSG00000249898.3 ENST00000515608.1 chr8:6475996-6506328 5 2142 28182 exonic 6.34 0 0,0,0 0 0,0,0 0 0.935419771485345 0 9.16433239962652 2.57359307359307 0 17.936974789916 4.37005890284579 0 0 1 chimp,human,macaque,orangutan, antisense antisense A549@0.0530255,AG04450@0.235534,BJ@0.157252,GM12878@0.464106,H1HESC@0.375684,HELAS3@0.139811,HEPG2@0.0895995,HMEC@0.010925,HSMM@0.344127,HUVEC@0.289246,K562@0.296413,MCF7@0.085575,NHEK@0.0404183,NHLF@0.594291,SKNSHRA@0.31699, 0 0 0 0 ENSG00000249898.3 ENST00000522897.1 chr8:6477656-6565721 4 519 87540 exonic 3.73 0 1,1,1 1 0,0,0 0 2.88299063285355 72.593 37.8227360308285 3.55003427004798 103.94 74.028901734104 4.7195339273475 124.472 0 0 chimp,cow,dog,elephant,guinea_pig,horse,human,macaque,marmoset,mouse,orangutan,pig,rat, antisense antisense A549@0.0530255,AG04450@0.235534,BJ@0.157252,GM12878@0.464106,H1HESC@0.375684,HELAS3@0.139811,HEPG2@0.0895995,HMEC@0.010925,HSMM@0.344127,HUVEC@0.289246,K562@0.296413,MCF7@0.085575,NHEK@0.0404183,NHLF@0.594291,SKNSHRA@0.31699, 0 0 0 0 ENSG00000249898.3 ENST00000525186.1 chr8:6492363-6565700 3 866 72467 intronic 7.03 0 0,1,0 1 0,0,0 0 3.11886789849173 72.593 0 3.62164847447804 103.94 0 4.72243917921261 124.472 0 0 chimp,cow,horse,human,macaque,marmoset,orangutan, antisense antisense A549@0.0530255,AG04450@0.235534,BJ@0.157252,GM12878@0.464106,H1HESC@0.375684,HELAS3@0.139811,HEPG2@0.0895995,HMEC@0.010925,HSMM@0.344127,HUVEC@0.289246,K562@0.296413,MCF7@0.085575,NHEK@0.0404183,NHLF@0.594291,SKNSHRA@0.31699, 0 0 0 0 ENSG00000249898.3 ENST00000527490.1 chr8:6492467-6565730 2 541 72720 intronic 7.03 0 0,1,0 1 0,0,0 0 3.10801705170517 72.593 1.99630314232902 3.60904840484048 102.59 2.2181146025878 4.70600935093509 122.972 0 1 human,orangutan, antisense antisense A549@0.0530255,AG04450@0.235534,BJ@0.157252,GM12878@0.464106,H1HESC@0.375684,HELAS3@0.139811,HEPG2@0.0895995,HMEC@0.010925,HSMM@0.344127,HUVEC@0.289246,K562@0.296413,MCF7@0.085575,NHEK@0.0404183,NHLF@0.594291,SKNSHRA@0.31699, 0 0 0 0 ENSG00000186530.12 ENST00000405979.2 chr8:6666038-6693020 8 4878 22090 intergenic 17.69 0 0,1,1 1 0,1,1 16.7949979499795 2.61018560434586 12.321 44.7720377203772 4.11928474422816 485.85 58.4760147601476 3.92440018107741 7.925 1 1 chimp,human,macaque,marmoset,orangutan, lincRNA processed_transcript A549@0.0073945,AG04450@0.126941,BJ@0.226637,GM12878@0,H1HESC@1.4433,HELAS3@0.0047435,HEPG2@0.0053475,HMEC@0.00753,HSMM@0.097952,HUVEC@0.0107705,K562@0,MCF7@0,NHEK@0.000531667,NHLF@0.180198,SKNSHRA@0.558024, 0 0 0 0 ENSG00000186530.12 ENST00000518724.1 chr8:6666038-6693166 7 4887 22229 intergenic 46.79 0 0,0,1 1 0,1,1 19.353386535707 2.59386387151919 0 46.3936975649683 4.0935264744253 0 59.9899733988132 3.89986054253453 0 1 1 chimp,human,macaque,marmoset,orangutan, lincRNA processed_transcript A549@0.0073945,AG04450@0.126941,BJ@0.226637,GM12878@0,H1HESC@1.4433,HELAS3@0.0047435,HEPG2@0.0053475,HMEC@0.00753,HSMM@0.097952,HUVEC@0.0107705,K562@0,MCF7@0,NHEK@0.000531667,NHLF@0.180198,SKNSHRA@0.558024, 0 0 0 0 ENSG00000186530.12 ENST00000409172.3 chr8:6666043-6693166 8 4880 22229 intergenic 66.48 0 0,0,1 1 0,1,1 19.3811475409836 2.59386387151919 0 46.4602459016393 4.0935264744253 0 60.0760245901639 3.89986054253453 0 1 1 chimp,human,macaque,marmoset,orangutan, lincRNA processed_transcript A549@0.0073945,AG04450@0.126941,BJ@0.226637,GM12878@0,H1HESC@1.4433,HELAS3@0.0047435,HEPG2@0.0053475,HMEC@0.00753,HSMM@0.097952,HUVEC@0.0107705,K562@0,MCF7@0,NHEK@0.000531667,NHLF@0.180198,SKNSHRA@0.558024, 0 0 0 0 ENSG00000186530.12 ENST00000430797.1 chr8:6671753-6693026 10 2075 19180 intergenic 17.69 0 0,1,0 1 0,1,1 39.3378313253012 0.310792492179354 10.323 92.4134939759036 1.69859228362878 7.85 114.73734939759 1.70761209593326 7.925 0 0 chimp,human,macaque,orangutan,pig, lincRNA processed_transcript A549@0.0073945,AG04450@0.126941,BJ@0.226637,GM12878@0,H1HESC@1.4433,HELAS3@0.0047435,HEPG2@0.0053475,HMEC@0.00753,HSMM@0.097952,HUVEC@0.0107705,K562@0,MCF7@0,NHEK@0.000531667,NHLF@0.180198,SKNSHRA@0.558024, 0 0 0 0 ENSG00000245857.2 ENST00000500823.2 chr8:6693076-6699979 3 1107 5792 intergenic -2.03 1 0,1,1 1 0,0,0 0 0 37.296 3.40379403794038 0 41.291 3.43631436314363 0 41.172 0 0 chimp,horse,human,macaque,marmoset,orangutan, lincRNA processed_transcript A549@0.0063995,AG04450@0.0145445,BJ@0.049153,GM12878@0,H1HESC@0.138512,HELAS3@0.141253,HEPG2@0.0540635,HMEC@0.003689,HSMM@0.009846,HUVEC@0.0021905,K562@0,MCF7@0.0018115,NHEK@0.00877533,NHLF@0.0070315,SKNSHRA@0.135379, 0 0 0 0 ENSG00000245857.2 ENST00000531701.1 chr8:6699433-6742798 3 377 42984 encompassing 1.10 1 0,0,1 0 0,0,0 0 0 0 0 0.399171784850177 0 0 1.09938581797878 0 0 0 chimp,horse,human,macaque,marmoset,orangutan, lincRNA processed_transcript A549@0.0063995,AG04450@0.0145445,BJ@0.049153,GM12878@0,H1HESC@0.138512,HELAS3@0.141253,HEPG2@0.0540635,HMEC@0.003689,HSMM@0.009846,HUVEC@0.0021905,K562@0,MCF7@0.0018115,NHEK@0.00877533,NHLF@0.0070315,SKNSHRA@0.135379, 0 0 0 0 ENSG00000254625.1 ENST00000526235.1 chr8:6786130-6787995 3 398 1463 intergenic 0 0 0,0,0 0 0,0,0 0 0 0 0 0 0 0 0 0 1 1 chimp,human,macaque,marmoset,orangutan, antisense antisense A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000215374.4 ENST00000529456.1 chr8:7159133-7212876 7 1425 52306 intergenic 8.40 0 0,0,0 0 0,1,0 0 0 0 0 0.100523840477192 0 0 12.1724085190991 24.362 0 1 chimp,human, lincRNA processed_transcript A549@0.355866,AG04450@0.091153,BJ@1.23348,GM12878@0.036718,H1HESC@0.236979,HELAS3@0,HEPG2@0,HMEC@0.188719,HSMM@1.73861,HUVEC@0.288347,K562@0,MCF7@0.108727,NHEK@0.0461127,NHLF@0.6041,SKNSHRA@0.526355, 8 6 5 6 ENSG00000225725.3 ENST00000529252.1 chr8:7812536-7844123 6 866 30711 intergenic 15.74 0 0,0,0 0 0,1,0 0 0 0 0 0.351111979421054 0 146.531177829099 43.9235778711211 0 0 1 chimp,human,macaque,orangutan, lincRNA processed_transcript A549@0.144089,AG04450@0.124635,BJ@0.658667,GM12878@0.0123485,H1HESC@0.156849,HELAS3@0,HEPG2@0.002042,HMEC@0.054758,HSMM@0.188438,HUVEC@0.104878,K562@0,MCF7@0.068118,NHEK@0.04771,NHLF@0.0844035,SKNSHRA@0.357693, 8 6 5 6 ENSG00000225725.3 ENST00000533615.1 chr8:7812596-7848219 8 2079 33530 intergenic 14.48 0 0,0,0 0 0,1,0 0 0 0 0 0.321592603638533 0 72.6228956228956 39.5123769758425 0 0 1 chimp,human,orangutan, lincRNA processed_transcript A549@0.144089,AG04450@0.124635,BJ@0.658667,GM12878@0.0123485,H1HESC@0.156849,HELAS3@0,HEPG2@0.002042,HMEC@0.054758,HSMM@0.188438,HUVEC@0.104878,K562@0,MCF7@0.068118,NHEK@0.04771,NHLF@0.0844035,SKNSHRA@0.357693, 72 2 41 2 ENSG00000253893.1 ENST00000519726.1 chr8:7992174-8085385 7 1671 91528 intergenic 2.34 0 0,1,0 0 0,0,0 0 0 0 5.07360861759425 3.73845162136177 6.838 4.99281867145422 9.87340485971506 9.174 0 1 chimp,human,macaque,orangutan, antisense antisense A549@0.0754165,AG04450@0.136384,BJ@0.265973,GM12878@0.052812,H1HESC@0.272181,HELAS3@0.215462,HEPG2@0.354417,HMEC@0.017081,HSMM@0.062929,HUVEC@0.0121875,K562@0.036986,MCF7@0.006686,NHEK@0.026887,NHLF@0.039213,SKNSHRA@0.229363, 87 2 0 0 ENSG00000253505.1 ENST00000517681.1 chr8:8272200-8282088 2 501 9385 intergenic 0 0 0,0,0 0 0,0,0 0 8.71550346297283 0 8.58682634730539 10.1176345231753 17.448 9.01796407185629 10.6656366542355 26.351 1 1 chimp,human,macaque,marmoset,orangutan, lincRNA lincRNA A549@0.0043155,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000253505.1 ENST00000519814.1 chr8:8279934-8282142 2 733 1473 intergenic -0.41 0 0,0,0 0 0,0,0 0 0 0 0 0 17.448 0 0 26.351 0 0 cat,chimp,cow,dog,horse,human,macaque,orangutan,panda, lincRNA lincRNA A549@0.0043155,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000254153.1 ENST00000521218.1 chr8:8314419-8318847 3 507 3917 intergenic 2.90 0 0,1,0 0 0,0,0 0 1.06714322185346 0 0 0.794740873117182 42.158 0 0.81159050293592 42.441 1 1 chimp,human,macaque,marmoset,orangutan, lincRNA lincRNA A549@0.133377,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0.0127985,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0.225588,NHEK@0.072477,NHLF@0,SKNSHRA@0.0267385, 0 0 0 0 ENSG00000253343.1 ENST00000524008.1 chr8:8413248-8418475 2 395 4830 intergenic 1.70 0 0,1,0 0 0,0,0 0 0 0 0 1.18115942028985 0 0 3.49689440993789 0 0 0 cat,chimp,dog,elephant,horse,human,macaque,marmoset,orangutan,panda,rabbit, lincRNA lincRNA A549@0.285627,AG04450@0,BJ@0,GM12878@0.0118085,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0.205253, 0 0 0 0 ENSG00000253774.1 ENST00000524073.1 chr8:8417404-8419634 3 576 1650 intergenic -1.02 0 0,0,0 0 0,0,0 0 0 0 0 0 0 0 0 0 0 0 chimp,human,macaque,marmoset,orangutan,panda, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0.03337, 0 0 0 0 ENSG00000253130.1 ENST00000518846.1 chr8:8418901-8422045 2 571 2571 intergenic -3.50 0 0,1,0 0 0,0,0 0 5.13418903150525 0 4.18563922942207 1.66161026837806 0 6.9492119089317 3.26954492415403 0 0 0 chimp,cow,elephant,guinea_pig,horse,human,macaque,marmoset,orangutan,pig,rabbit, lincRNA lincRNA A549@0.0876825,AG04450@0,BJ@0,GM12878@0.0180435,H1HESC@0,HELAS3@0,HEPG2@0.013535,HMEC@0.013531,HSMM@0,HUVEC@0,K562@0,MCF7@0.0070175,NHEK@0,NHLF@0,SKNSHRA@0.201678, 0 0 0 0 ENSG00000253130.1 ENST00000522661.1 chr8:8418904-8427198 2 641 7651 intergenic -1.57 0 0,1,0 0 0,0,0 0 4.77323225722128 0 2.38689547581903 2.02666318128349 0 3.23244929797192 2.97399032806169 0 0 0 cat,chimp,guinea_pig,human,macaque,marmoset,mouse,orangutan,rabbit, lincRNA lincRNA A549@0.0876825,AG04450@0,BJ@0,GM12878@0.0180435,H1HESC@0,HELAS3@0,HEPG2@0.013535,HMEC@0.013531,HSMM@0,HUVEC@0,K562@0,MCF7@0.0070175,NHEK@0,NHLF@0,SKNSHRA@0.201678, 0 0 0 0 ENSG00000254367.1 ENST00000522213.1 chr8:8581203-8639989 4 662 58118 intergenic -4.31 0 0,1,1 0 0,0,0 0 1.15533913761657 32.038 0 0.992687291372724 19.188 0 1.22664234832582 13.687 0 1 chimp,human,macaque,orangutan, lincRNA lincRNA A549@1.13129,AG04450@0.0274635,BJ@0.0134145,GM12878@0,H1HESC@0.0436905,HELAS3@0.080859,HEPG2@0.043385,HMEC@0,HSMM@0,HUVEC@0.036086,K562@0.015764,MCF7@0.0610395,NHEK@0.00638667,NHLF@0.119462,SKNSHRA@0.0689295, 0 0 0 0 ENSG00000254367.1 ENST00000519147.1 chr8:8608884-8638945 3 397 29660 intergenic -10.36 0 0,0,0 0 0,0,0 0 2.26385704652731 0 0 1.42198246797033 0 0 1.79163857046527 0 0 1 chimp,human,orangutan, lincRNA lincRNA A549@1.13129,AG04450@0.0274635,BJ@0.0134145,GM12878@0,H1HESC@0.0436905,HELAS3@0.080859,HEPG2@0.043385,HMEC@0,HSMM@0,HUVEC@0.036086,K562@0.015764,MCF7@0.0610395,NHEK@0.00638667,NHLF@0.119462,SKNSHRA@0.0689295, 0 0 0 0 ENSG00000254340.1 ENST00000520017.1 chr8:8998934-9002945 3 648 3359 exonic -2.71 0 0,0,0 0 0,0,0 154.375 0 241.303 117.734567901235 0 168.952 123.70987654321 0 195.921 0 0 chimp,human,macaque,marmoset,opossum,orangutan, antisense antisense A549@0.0212905,AG04450@0.0052335,BJ@0,GM12878@0.0030965,H1HESC@0,HELAS3@0.026114,HEPG2@0.0060615,HMEC@0,HSMM@0.0035015,HUVEC@0.037581,K562@0.034356,MCF7@0.006247,NHEK@0,NHLF@0,SKNSHRA@0.079249, 0 0 0 0 ENSG00000254340.1 ENST00000522057.1 chr8:8999032-9002933 2 448 3451 exonic -1.32 0 0,1,0 0 0,0,0 111.073660714286 0 291.577 92.53125 0 204.282 97.4799107142857 0 232.233 0 0 cat,chimp,human,macaque,orangutan, antisense antisense A549@0.0212905,AG04450@0.0052335,BJ@0,GM12878@0.0030965,H1HESC@0,HELAS3@0.026114,HEPG2@0.0060615,HMEC@0,HSMM@0.0035015,HUVEC@0.037581,K562@0.034356,MCF7@0.006247,NHEK@0,NHLF@0,SKNSHRA@0.079249, 0 0 0 0 ENSG00000248538.2 ENST00000512942.2 chr8:9046521-9060364 4 695 13142 intergenic 1.35 0 1,1,1 1 0,0,0 0 2.20970932886927 0 10.6057553956835 75.4889666717395 0 11.0014388489209 80.9117333739157 0 0 1 chimp,human,macaque,orangutan, lincRNA lincRNA A549@0.11428,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0.0328985,HEPG2@0,HMEC@0.079637,HSMM@0,HUVEC@0.031796,K562@2.94528,MCF7@0.0029415,NHEK@0.157586,NHLF@0,SKNSHRA@1.74184, 0 0 0 0 ENSG00000248538.2 ENST00000417333.2 chr8:9046856-9060000 3 405 12735 intergenic -1.72 0 0,0,0 0 0,0,0 0 2.28032979976443 0 18.2 75.7590106007067 0 18.879012345679 81.2122497055359 0 0 1 chimp,human,macaque,orangutan, lincRNA lincRNA A549@0.11428,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0.0328985,HEPG2@0,HMEC@0.079637,HSMM@0,HUVEC@0.031796,K562@2.94528,MCF7@0.0029415,NHEK@0.157586,NHLF@0,SKNSHRA@1.74184, 0 0 0 0 ENSG00000248538.2 ENST00000523747.1 chr8:9047015-9060347 4 560 12766 intergenic 1.35 0 0,0,1 0 0,0,0 0 2.27479241735861 0 13.1625 77.7123609587968 0 13.6535714285714 83.2948456838477 0 1 1 chimp,human,macaque,marmoset,orangutan, lincRNA lincRNA A549@0.11428,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0.0328985,HEPG2@0,HMEC@0.079637,HSMM@0,HUVEC@0.031796,K562@2.94528,MCF7@0.0029415,NHEK@0.157586,NHLF@0,SKNSHRA@1.74184, 0 0 0 0 ENSG00000254235.1 ENST00000522836.1 chr8:9106927-9112509 2 741 4839 intergenic -1.64 0 0,0,0 0 0,0,0 0 0 0 0 9.64331473444927 0 0 10.9241578838603 2.43 0 0 human, lincRNA lincRNA A549@0.0029395,AG04450@0,BJ@0,GM12878@0,H1HESC@0.009187,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@1.42071, 0 0 0 0 ENSG00000254235.1 ENST00000523246.1 chr8:9107050-9183486 3 671 75761 intergenic 1.16 0 0,0,0 0 0,0,0 0 5.25868190757778 0 12.682563338301 10.9484431303705 0 13.0491803278689 11.8680587637439 2.43 0 1 chimp,human,macaque,orangutan, lincRNA lincRNA A549@0.0029395,AG04450@0,BJ@0,GM12878@0,H1HESC@0.009187,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@1.42071, 0 0 0 0 ENSG00000254235.1 ENST00000520255.1 chr8:9107114-9271224 4 859 163245 intergenic -0.14 0 0,0,0 0 0,0,0 0 4.29112683389997 0 0 9.03516799901988 0 0 9.99117890287604 2.43 0 1 chimp,human,marmoset,orangutan, lincRNA lincRNA A549@0.0029395,AG04450@0,BJ@0,GM12878@0,H1HESC@0.009187,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@1.42071, 0 0 0 0 ENSG00000253887.1 ENST00000518589.1 chr8:9112859-9117805 2 420 4524 intergenic -0.99 1 0,0,0 0 0,0,0 0 21.8879310344828 0 0 30.8315649867374 0 0 32.934792219275 0 0 1 chimp,human,macaque,orangutan, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0.013793,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000254235.1 ENST00000520390.1 chr8:9182561-9192590 3 3439 6586 intergenic 3.53 0 0,0,0 0 0,0,0 0 0 0 0 0 45.951 0 0 47.901 0 1 chimp,human,macaque,marmoset, lincRNA lincRNA A549@0.0029395,AG04450@0,BJ@0,GM12878@0,H1HESC@0.009187,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@1.42071, 0 0 0 0 ENSG00000254235.1 ENST00000518619.1 chr8:9183618-9225402 4 803 40975 intergenic -5.01 0 0,0,0 0 0,1,0 0 3.19128737034777 0 2.54047322540473 7.29088468578402 0 2.58032378580324 7.67607077486272 0 1 1 chimp,human,macaque,marmoset,orangutan, lincRNA lincRNA A549@0.0029395,AG04450@0,BJ@0,GM12878@0,H1HESC@0.009187,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@1.42071, 0 0 0 0 ENSG00000253735.1 ENST00000521143.1 chr8:9208748-9215951 3 560 6639 intergenic -0.79 0 0,0,0 0 0,0,0 0 0 0 0 0 2.97 0 0 2.992 0 0 cat,chimp,cow,dog,human,macaque,marmoset,orangutan,pig, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000254237.1 ENST00000522765.1 chr8:9229480-9232475 3 451 2540 intergenic 7.74 0 0,0,0 0 0,0,0 0 0 0 0 5.20472440944882 0 0 5.33346456692913 0 0 1 chimp,human,macaque,orangutan, lincRNA lincRNA A549@0.0040205,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000254237.1 ENST00000522129.1 chr8:9232408-9293715 3 542 60761 intergenic -0.27 0 0,0,0 0 0,0,0 0 5.75772288145356 10.35 0 7.40590181201758 0 0 8.98740968713484 0 0 1 human,macaque,marmoset,orangutan, lincRNA lincRNA A549@0.0040205,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000254237.1 ENST00000521842.1 chr8:9237490-9273450 4 683 35271 intergenic 1.50 0 0,0,0 0 0,0,0 0 4.71228487992969 0 15.2664714494876 8.03612032547986 0 15.9809663250366 9.21516259816847 4.617 0 0 chimp,dog,human,macaque,marmoset,mouse,orangutan,pig, lincRNA lincRNA A549@0.0040205,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000253230.1 ENST00000518557.1 chr8:9757574-9758710 2 867 267 intergenic -1.07 0 0,0,1 0 0,0,0 35.9400230680507 58.8501872659176 0 66.2053056516724 57.6067415730337 15.184 57.3783160322953 36.4531835205993 14.737 0 0 cat,chimp,cow,dog,elephant,guinea_pig,horse,human,macaque,marmoset,mouse,orangutan,panda,pig,rabbit, lincRNA retained_intron A549@0,AG04450@0.000767,BJ@0.002833,GM12878@0,H1HESC@12.4743,HELAS3@0.0007735,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0.0042565,K562@0,MCF7@0.000688,NHEK@0,NHLF@0.0013205,SKNSHRA@1.70847, 0 0 0 0 ENSG00000253230.1 ENST00000519461.1 chr8:9757574-9760839 3 2919 342 intergenic 3.01 0 0,1,1 1 0,0,0 72.93251113395 45.9444444444444 337.798 36.2946214457006 60.3245614035088 309.048 40.446385748544 45.5087719298246 293.882 0 0 chimp,human,macaque,marmoset,rat, lincRNA processed_transcript A549@0,AG04450@0.000767,BJ@0.002833,GM12878@0,H1HESC@12.4743,HELAS3@0.0007735,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0.0042565,K562@0,MCF7@0.000688,NHEK@0,NHLF@0.0013205,SKNSHRA@1.70847, 0 0 0 0 ENSG00000253230.1 ENST00000517675.1 chr8:9757574-9760907 1 3333 0 intergenic 3.97 0 0,0,1 1 0,0,0 72.8094809480948 0 356.534 45.7362736273627 0 324.416 47.2238223822382 0 313.774 0 1 chimp,human,macaque,marmoset, lincRNA retained_intron A549@0,AG04450@0.000767,BJ@0.002833,GM12878@0,H1HESC@12.4743,HELAS3@0.0007735,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0.0042565,K562@0,MCF7@0.000688,NHEK@0,NHLF@0.0013205,SKNSHRA@1.70847, 0 0 0 0 ENSG00000253230.1 ENST00000521863.1 chr8:9760677-9761720 3 542 497 intergenic 6.37 0 0,0,0 0 0,0,0 289.538745387454 385.030181086519 419.01 304.809963099631 236.700201207243 122.207 289.627306273063 216.454728370221 623.278 0 0 cat,cow,dog,guinea_pig,horse,human,macaque,marmoset,mouse,opossum,panda,pig,rabbit,rat, lincRNA processed_transcript A549@0,AG04450@0.000767,BJ@0.002833,GM12878@0,H1HESC@12.4743,HELAS3@0.0007735,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0.0042565,K562@0,MCF7@0.000688,NHEK@0,NHLF@0.0013205,SKNSHRA@1.70847, 0 0 0 0 ENSG00000253230.1 ENST00000521242.1 chr8:9760971-9762876 4 712 1187 intergenic 0 0 0,0,0 0 0,0,0 279.887640449438 184.208930075821 284.418 240.924157303371 161.662173546756 338.525 195.273876404494 172.771693344566 311.786 0 0 cow,dog,horse,human,marmoset,mouse,panda,pig,rabbit, lincRNA processed_transcript A549@0,AG04450@0.000767,BJ@0.002833,GM12878@0,H1HESC@12.4743,HELAS3@0.0007735,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0.0042565,K562@0,MCF7@0.000688,NHEK@0,NHLF@0.0013205,SKNSHRA@1.70847, 0 0 0 0 ENSG00000253641.1 ENST00000524047.1 chr8:10332075-10339484 5 540 6861 intergenic 4.19 0 0,0,1 0 0,0,0 0 0 0 0 11.5430695233931 0 0 27.5436525287859 0 0 1 chimp,human,macaque,orangutan, lincRNA lincRNA A549@0.0516715,AG04450@0.0347935,BJ@0.0237585,GM12878@0.0080605,H1HESC@0.0483065,HELAS3@0.016082,HEPG2@0.0674895,HMEC@0,HSMM@0.0039265,HUVEC@0.022149,K562@0.0042605,MCF7@0.0482955,NHEK@0.0416793,NHLF@0.010701,SKNSHRA@0.050718, 0 0 0 0 ENSG00000253641.1 ENST00000517732.1 chr8:10334709-10338976 4 558 3703 intergenic 7.40 0 0,1,1 0 0,0,0 0 0 0 0 6.54928436402917 0 0 37.001080205239 0 0 1 chimp,human,macaque,orangutan, lincRNA lincRNA A549@0.0516715,AG04450@0.0347935,BJ@0.0237585,GM12878@0.0080605,H1HESC@0.0483065,HELAS3@0.016082,HEPG2@0.0674895,HMEC@0,HSMM@0.0039265,HUVEC@0.022149,K562@0.0042605,MCF7@0.0482955,NHEK@0.0416793,NHLF@0.010701,SKNSHRA@0.050718, 0 0 0 0 ENSG00000253678.1 ENST00000520494.1 chr8:10335001-10336885 2 487 1395 intergenic 7.05 0 0,0,0 0 0,0,0 0 0 0 11.0924024640657 11.1383512544803 3.312 11.2402464065708 91.8516129032258 3.408 0 1 chimp,human,orangutan, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0.086169,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000253641.1 ENST00000518098.1 chr8:10335380-10338496 3 521 2591 intergenic 0 0 0,0,0 0 0,0,0 0 0 0 0 9.36009262832883 0 0 52.8811269780008 0 0 0 cat,dog,horse,human,macaque,marmoset,orangutan,panda, lincRNA lincRNA A549@0.0516715,AG04450@0.0347935,BJ@0.0237585,GM12878@0.0080605,H1HESC@0.0483065,HELAS3@0.016082,HEPG2@0.0674895,HMEC@0,HSMM@0.0039265,HUVEC@0.022149,K562@0.0042605,MCF7@0.0482955,NHEK@0.0416793,NHLF@0.010701,SKNSHRA@0.050718, 0 0 0 0 ENSG00000253649.1 ENST00000523024.1 chr8:10340388-10405095 5 1118 63581 intronic 6.14 0 0,1,0 0 0,0,0 0 0.569824318585741 0 100.106440071556 4.04614586118494 5.562 112.659212880143 4.69984743870024 4.358 0 0 chimp,human,macaque,marmoset,orangutan,pig, antisense antisense A549@0.003762,AG04450@0,BJ@0,GM12878@2.08452,H1HESC@0.0141155,HELAS3@0,HEPG2@0.0152985,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0.0073235,NHEK@0,NHLF@0.261428,SKNSHRA@0, 0 0 0 0 ENSG00000253649.1 ENST00000521149.1 chr8:10340434-10375525 5 572 34511 intergenic -0.24 0 0,0,0 0 0,0,0 0 0.819680681521834 0 72.2185314685315 4.71299006113993 7.641 86.3216783216783 5.27092810987801 7.881 0 0 cat,chimp,dog,guinea_pig,horse,human,macaque,marmoset,orangutan, antisense antisense A549@0.003762,AG04450@0,BJ@0,GM12878@2.08452,H1HESC@0.0141155,HELAS3@0,HEPG2@0.0152985,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0.0073235,NHEK@0,NHLF@0.261428,SKNSHRA@0, 0 0 0 0 ENSG00000248896.2 ENST00000506149.2 chr8:10586824-10622233 3 818 34587 intronic -1.46 0 0,1,0 0 0,0,0 0 2.7416081186573 0 0 8.61048949027091 8.705 0 9.91855321363518 8.888 0 0 dog,human,macaque,marmoset,orangutan, lincRNA processed_transcript A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000248896.2 ENST00000519568.1 chr8:10587088-10628902 2 249 41563 intronic -7.87 0 0,0,0 0 0,0,0 0 3.04792724298054 0 0 9.50689315015759 8.705 0 11.3723504078146 8.888 0 0 chimp,guinea_pig,human,macaque,marmoset,orangutan, lincRNA processed_transcript A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000253695.1 ENST00000522026.1 chr8:10698086-10704011 3 436 5485 intergenic 0.46 0 0,0,1 0 0,0,0 0 0 0 12.8669724770642 0 17.339 15.3394495412844 0 17.818 0 0 chimp,guinea_pig,human,macaque,orangutan,pig, antisense antisense A549@0.0224725,AG04450@0.013487,BJ@0,GM12878@0.096209,H1HESC@0.132672,HELAS3@0.046677,HEPG2@0.048377,HMEC@0.009327,HSMM@0.029133,HUVEC@0,K562@0.0500465,MCF7@0.132859,NHEK@0.01503,NHLF@0.008889,SKNSHRA@0, 0 0 0 0 ENSG00000255518.1 ENST00000528629.1 chr8:11413760-11415531 2 542 1227 exonic -7.15 0 0,0,1 0 0,0,0 0 16.1825590872046 0 33.2915129151292 71.0578647106765 11.854 45.2693726937269 62.5941320293398 15.837 0 0 cat,chimp,dog,elephant,human,macaque,marmoset,orangutan,panda,rabbit, antisense antisense A549@0.0344545,AG04450@0,BJ@0.066462,GM12878@0.0181625,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0.015054,HSMM@0.020952,HUVEC@0,K562@0,MCF7@0.0264565,NHEK@0.185655,NHLF@0.470079,SKNSHRA@0.755947, 0 0 0 0 ENSG00000170983.3 ENST00000304233.3 chr8:11433822-11438851 3 2147 2878 intergenic -1.39 1 0,0,0 0 0,1,0 0 0 0 0 9.67929117442669 0 0 10.2154273801251 0 0 1 chimp,human,macaque,orangutan, lincRNA non_coding A549@0.002019,AG04450@0,BJ@0,GM12878@0.00247,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0.0056105,NHEK@0,NHLF@0.126379,SKNSHRA@0.0832775, 0 0 0 0 ENSG00000255052.2 ENST00000526690.1 chr8:11973284-11974137 2 584 267 intergenic 16.14 0 0,0,0 0 0,0,0 0 0 0 0 0 0 343.628424657534 441.475655430712 0 0 1 chimp,human,macaque,orangutan, antisense antisense A549@0.093682,AG04450@0.274671,BJ@1.05761,GM12878@0.0512115,H1HESC@0.349086,HELAS3@0,HEPG2@0,HMEC@0.089526,HSMM@0.037068,HUVEC@0.039647,K562@0.004336,MCF7@0.101222,NHEK@0.0758977,NHLF@0.124557,SKNSHRA@1.21793, 0 0 0 0 ENSG00000255052.2 ENST00000434078.2 chr8:11973291-12008698 6 1065 34332 encompassing 16.14 0 0,0,0 0 0,1,0 0 0 0 0 0 0 177.8 54.6296458114878 0 0 0 cat,chimp,human,orangutan, antisense antisense A549@0.093682,AG04450@0.274671,BJ@1.05761,GM12878@0.0512115,H1HESC@0.349086,HELAS3@0,HEPG2@0,HMEC@0.089526,HSMM@0.037068,HUVEC@0.039647,K562@0.004336,MCF7@0.101222,NHEK@0.0758977,NHLF@0.124557,SKNSHRA@1.21793, 8 6 5 6 ENSG00000255052.2 ENST00000530099.1 chr8:11973652-11979872 2 558 5660 intergenic 0 0 0,1,0 0 0,0,0 0 0 0 0 0 0 162.10394265233 86.0593639575972 98.406 0 1 chimp,human,macaque,orangutan, antisense antisense A549@0.093682,AG04450@0.274671,BJ@1.05761,GM12878@0.0512115,H1HESC@0.349086,HELAS3@0,HEPG2@0,HMEC@0.089526,HSMM@0.037068,HUVEC@0.039647,K562@0.004336,MCF7@0.101222,NHEK@0.0758977,NHLF@0.124557,SKNSHRA@1.21793, 0 0 0 0 ENSG00000255495.1 ENST00000528514.1 chr8:12051976-12053789 2 1359 452 intergenic -2.98 0 0,0,0 0 0,0,0 0 0 0 6.00662251655629 48.5929203539823 6.838 71.588668138337 54.0132743362832 40.42 0 0 chimp,horse,human,macaque,marmoset,orangutan,panda, antisense antisense A549@1.8857,AG04450@5.65609,BJ@9.08756,GM12878@0.040553,H1HESC@5.22195,HELAS3@2.22543,HEPG2@5.11476,HMEC@1.08007,HSMM@2.66336,HUVEC@2.3093,K562@1.23447,MCF7@0.632957,NHEK@1.50147,NHLF@2.61389,SKNSHRA@8.06829, 87 2 0 0 ENSG00000215248.3 ENST00000399870.3 chr8:12064280-12312147 3 3035 244828 intronic -2.53 0 0,0,0 0 0,0,0 0 0 0 44.9812191103789 2.08155521427288 14.23 47.9515650741351 13.4188328132403 262.192 0 0 chimp,dog,guinea_pig,human,macaque,marmoset,orangutan,pig, lincRNA lincRNA A549@0.4095,AG04450@1.15,BJ@2.00138,GM12878@0.062732,H1HESC@3.69611,HELAS3@1.16468,HEPG2@1.10277,HMEC@0.040853,HSMM@0.262306,HUVEC@1.23523,K562@0.421583,MCF7@0.373498,NHEK@0.496017,NHLF@0.221151,SKNSHRA@2.20672, 0 0 0 0 ENSG00000227888.2 ENST00000433621.1 chr8:12219527-12268510 5 771 48204 intergenic 15.47 0 0,0,0 0 0,1,0 0 0 0 0 0.0654717450833956 0 236.214007782101 24.7595012862003 0 0 1 chimp,human,macaque,orangutan, lincRNA processed_transcript A549@0.160515,AG04450@0.206051,BJ@1.30817,GM12878@0.045079,H1HESC@0.220396,HELAS3@0,HEPG2@0.0067185,HMEC@0.077365,HSMM@0.124811,HUVEC@0.153103,K562@0,MCF7@0.0595505,NHEK@0.0566307,NHLF@0.478837,SKNSHRA@1.00564, 0 0 0 0 ENSG00000227888.2 ENST00000525829.1 chr8:12219528-12226124 2 919 5675 intergenic 15.01 0 0,0,0 0 0,1,0 0 0 0 0 0 0 288.13710554951 50.9547136563877 0 0 1 chimp,human,macaque,orangutan, lincRNA processed_transcript A549@0.160515,AG04450@0.206051,BJ@1.30817,GM12878@0.045079,H1HESC@0.220396,HELAS3@0,HEPG2@0.0067185,HMEC@0.077365,HSMM@0.124811,HUVEC@0.153103,K562@0,MCF7@0.0595505,NHEK@0.0566307,NHLF@0.478837,SKNSHRA@1.00564, 8 6 5 6 ENSG00000247397.2 ENST00000500162.1 chr8:12394588-12523097 9 3950 124543 intronic 27.10 0 0,1,0 0 0,0,0 0 0 0 36.8898734177215 4.3020804059642 0 71.0475949367089 24.6096047148374 23.778 0 1 chimp,human, lincRNA lincRNA A549@0.0387195,AG04450@0.0384385,BJ@0.063281,GM12878@0.617318,H1HESC@4.87969,HELAS3@0.0760775,HEPG2@0.0425645,HMEC@0.017059,HSMM@0.008293,HUVEC@0.073655,K562@0.01866,MCF7@0.66118,NHEK@0.00829067,NHLF@0.007693,SKNSHRA@0.0159675, 0 0 0 0 ENSG00000247397.2 ENST00000500410.1 chr8:12452490-12522859 8 2154 68201 intergenic 20.64 0 0,0,0 0 0,0,0 0 0 0 19.2274837511606 5.3135437896805 11.76 27.4336118848654 27.6945499332854 61.208 0 1 chimp,human,macaque,orangutan, lincRNA lincRNA A549@0.0387195,AG04450@0.0384385,BJ@0.063281,GM12878@0.617318,H1HESC@4.87969,HELAS3@0.0760775,HEPG2@0.0425645,HMEC@0.017059,HSMM@0.008293,HUVEC@0.073655,K562@0.01866,MCF7@0.66118,NHEK@0.00829067,NHLF@0.007693,SKNSHRA@0.0159675, 70 2 39 2 ENSG00000247397.2 ENST00000500955.1 chr8:12463819-12523137 2 1571 57745 intergenic 7.25 0 0,1,0 0 0,0,0 0 0 0 23.6664544875875 5.17153000259763 0 62.560152768937 28.4483505065374 19.662 0 0 chimp,cow,horse,human,marmoset,orangutan,panda, lincRNA lincRNA A549@0.0387195,AG04450@0.0384385,BJ@0.063281,GM12878@0.617318,H1HESC@4.87969,HELAS3@0.0760775,HEPG2@0.0425645,HMEC@0.017059,HSMM@0.008293,HUVEC@0.073655,K562@0.01866,MCF7@0.66118,NHEK@0.00829067,NHLF@0.007693,SKNSHRA@0.0159675, 0 0 0 0 ENSG00000254813.1 ENST00000534827.1 chr8:12623358-12668987 5 1242 44379 intergenic 3.50 0 0,0,0 0 0,0,0 0 4.46569323328601 0 0 7.27078122535433 0 2.93478260869565 8.80218121183442 0 0 1 chimp,human,macaque,marmoset, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0.0444955,H1HESC@0,HELAS3@0.029816,HEPG2@0,HMEC@0,HSMM@0.00165,HUVEC@0,K562@0,MCF7@0.001649,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000254813.1 ENST00000530228.1 chr8:12623571-12645965 3 759 21631 intergenic 0.05 0 0,1,0 0 0,0,0 0 2.75119042115482 0 0 0.907493874531922 54.429 4.80237154150198 1.20872821413712 70.323 0 0 cat,chimp,human,macaque,marmoset,orangutan, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0.0444955,H1HESC@0,HELAS3@0.029816,HEPG2@0,HMEC@0,HSMM@0.00165,HUVEC@0,K562@0,MCF7@0.001649,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000255494.1 ENST00000530150.1 chr8:12651752-12675800 2 502 23544 intergenic -8.67 0 0,0,0 0 0,0,0 10.8685258964143 7.18280665987088 0 20.1613545816733 11.8072120285423 0 187.880478087649 14.6219418960245 0 0 0 cat,chimp,dog,human,macaque,marmoset,orangutan,panda,pig, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0.03266,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000253932.1 ENST00000523495.1 chr8:13196083-13200263 2 3486 692 intronic 5.64 0 0,0,1 0 0,0,0 0 0 0 0.804647160068847 0 3.419 1.18473895582329 0 3.445 0 1 human,macaque,marmoset,orangutan, antisense antisense A549@0,AG04450@0,BJ@0,GM12878@0.001156,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0.0199055,K562@0,MCF7@0,NHEK@0,NHLF@0.002213,SKNSHRA@0.000771, 0 0 0 0 ENSG00000255069.1 ENST00000529018.1 chr8:13415166-13462119 2 1804 45147 encompassing -1.33 0 0,0,0 0 0,0,0 123.977827050998 7.34108578643099 41.04 86.8464523281596 15.3960174540944 50.298 76.4168514412417 19.2874831107272 56.132 1 1 chimp,human,macaque,marmoset,orangutan, processed_transcript processed_transcript A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0.0608335,NHEK@0,NHLF@0,SKNSHRA@0.0030795, 0 0 0 0 ENSG00000254753.1 ENST00000525673.1 chr8:13701610-13706618 2 587 4419 intergenic -4.89 0 0,0,0 0 0,0,0 0 0 0 0 2.62819642453044 0 0 4.73410273817606 0 0 0 chimp,cow,dog,elephant,guinea_pig,horse,human,macaque,marmoset,orangutan, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000254575.1 ENST00000527110.1 chr8:14018806-14022868 3 485 3573 intronic -4.82 0 0,0,0 0 0,0,0 0 25.0993562832354 0 0 23.1788413098237 25.661 0 22.0408620207109 34.53 0 0 chimp,dog,horse,human,macaque,marmoset,orangutan,pig, antisense antisense A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0.008502,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000255076.1 ENST00000532973.1 chr8:14736566-14737328 2 307 453 intronic -4.07 0 0,1,0 0 0,0,0 0 0 0 0 0 0 0 0 0 0 1 chimp,human,orangutan, sense_intronic sense_intronic A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000253648.1 ENST00000517369.1 chr8:15830824-15857833 3 386 26619 intergenic 8.36 0 0,0,0 0 0,0,0 0 8.0439911341523 0 0 12.4799203576393 0 0 13.1567677223036 0 0 0 cat,chimp,human,macaque,orangutan, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000253184.1 ENST00000521055.1 chr8:16461764-16522388 3 455 60165 intergenic -4.97 0 0,0,0 0 0,0,0 93.8021978021978 2.17644810105543 25.5 69.3516483516484 4.8432311144353 17.264 105.241758241758 6.90393085681044 17.388 0 0 cat,chimp,dog,guinea_pig,horse,human,macaque,marmoset,mouse,orangutan,panda,pig,rabbit,rat, lincRNA lincRNA A549@0,AG04450@0,BJ@0.0141315,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0.0178675,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000253496.1 ENST00000521411.1 chr8:16512627-16772553 5 540 259378 intergenic 0.65 0 0,0,0 0 0,0,0 0 7.2465051006639 0 17.1092592592593 12.0896876373478 0 42.0722222222222 13.7913508470263 0 0 0 cat,chimp,dog,elephant,horse,human,macaque,marmoset,orangutan,rabbit, lincRNA lincRNA A549@0,AG04450@0.0119425,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000253496.1 ENST00000519280.1 chr8:16544446-16548471 2 268 3755 intergenic 0 0 0,1,0 0 0,0,0 0 0 0 0 4.53182423435419 0 0 4.68175765645806 0 0 0 chimp,dog,horse,human,macaque,marmoset,orangutan,panda, lincRNA lincRNA A549@0,AG04450@0.0119425,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000249258.2 ENST00000513892.2 chr8:16988690-17007298 3 2289 16315 intergenic 2.94 0 0,0,0 0 0,0,0 0 9.80698743487588 0 0.502402795980778 5.45068954949433 4.541 1.59239842726081 6.36132393502911 4.769 0 0 chimp,horse,human,macaque,marmoset,orangutan, lincRNA lincRNA A549@0.113617,AG04450@0.394436,BJ@0.346428,GM12878@0,H1HESC@0.198658,HELAS3@0.114733,HEPG2@0.250328,HMEC@0,HSMM@0.0053865,HUVEC@0.300229,K562@0.003332,MCF7@0,NHEK@0.051121,NHLF@0.0160995,SKNSHRA@0.372507, 0 0 0 0 ENSG00000253168.1 ENST00000517454.1 chr8:17561497-17563696 2 733 1464 intronic -3.19 0 0,1,0 0 0,0,0 0 0 0 2.36834924965894 0 0 2.47339699863574 0 0 0 0 cat,chimp,cow,dog,elephant,horse,human,macaque,marmoset,orangutan,panda, antisense antisense A549@0.0059065,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0.0057975,HMEC@0,HSMM@0,HUVEC@0.028343,K562@0,MCF7@0.016412,NHEK@0.088139,NHLF@0,SKNSHRA@0.0075665, 0 0 0 0 ENSG00000253944.1 ENST00000522768.1 chr8:17658854-17718578 2 508 59214 intergenic 7.06 0 0,1,0 0 0,0,0 0 2.04482048164286 0 16.4645669291339 6.77111831661431 28.06 16.4311023622047 8.04372276826426 28.441 0 0 chimp,cow,dog,elephant,guinea_pig,human,macaque,marmoset,orangutan,pig,rabbit, antisense antisense A549@0.847776,AG04450@0,BJ@0,GM12878@0,H1HESC@0.0234755,HELAS3@0.399343,HEPG2@0.502866,HMEC@0.006415,HSMM@0,HUVEC@0.010603,K562@0,MCF7@0.210418,NHEK@0.0235457,NHLF@0,SKNSHRA@0.021336, 0 0 0 0 ENSG00000253671.1 ENST00000520646.1 chr8:17666450-17678377 3 664 11259 intergenic -6.78 0 0,0,0 0 0,0,0 0 0 25.544 3.96084337349398 0.58344435562661 59.1 9.4789156626506 0.702104982680522 62.344 0 0 chimp,horse,human,macaque,marmoset,orangutan,rabbit, lincRNA lincRNA A549@2.0268,AG04450@0,BJ@0.0043435,GM12878@0,H1HESC@0,HELAS3@0.294504,HEPG2@0.368785,HMEC@0.006601,HSMM@0,HUVEC@0,K562@0,MCF7@0.356563,NHEK@0.0786783,NHLF@0.013332,SKNSHRA@0.104709, 0 0 0 0 ENSG00000253671.1 ENST00000520156.1 chr8:17666720-17678134 2 743 10669 intergenic -4.49 0 0,0,1 0 0,0,0 0 0 0 3.53970390309556 0.344830818258506 5.866 8.47106325706595 0.470053425813103 6.257 0 0 chimp,guinea_pig,human,macaque,marmoset,orangutan, lincRNA retained_intron A549@2.0268,AG04450@0,BJ@0.0043435,GM12878@0,H1HESC@0,HELAS3@0.294504,HEPG2@0.368785,HMEC@0.006601,HSMM@0,HUVEC@0,K562@0,MCF7@0.356563,NHEK@0.0786783,NHLF@0.013332,SKNSHRA@0.104709, 0 0 0 0 ENSG00000253215.1 ENST00000519368.1 chr8:17739552-17740170 2 527 89 exonic 0 0 0,0,1 0 0,0,0 44.9715370018975 0 6.82 58.7058823529412 0 14.607 84.8823529411765 0 13.282 0 0 cat,chimp,cow,elephant,horse,human,macaque,marmoset,orangutan,panda, antisense antisense A549@0.0041035,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0.0077735,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000254054.1 ENST00000519038.1 chr8:17763265-17773919 5 1147 9499 intronic -4.20 0 0,0,1 0 0,0,0 0 0 0 0 0 0 0 0 0 0 1 chimp,human,orangutan, lincRNA lincRNA A549@0.0857645,AG04450@0,BJ@0,GM12878@0,H1HESC@0.015158,HELAS3@0.652205,HEPG2@1.19386,HMEC@0,HSMM@0,HUVEC@0,K562@0.004648,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0.003946, 0 0 0 0 ENSG00000245281.2 ENST00000505114.2 chr8:17942377-17945720 4 447 2890 exonic -3.70 0 1,1,1 1 0,0,0 0 0 0 0 18.4809688581315 15.557 181.232662192394 43.2332179930796 15.463 0 0 chimp,dog,guinea_pig,horse,human,macaque,marmoset,mouse,orangutan,rat, lincRNA processed_transcript A549@0.136623,AG04450@0.112557,BJ@0.0992185,GM12878@0.060939,H1HESC@0.088183,HELAS3@0.168947,HEPG2@0.143985,HMEC@0.170516,HSMM@0.317868,HUVEC@0,K562@0.174767,MCF7@0.121335,NHEK@0.0687797,NHLF@0.100342,SKNSHRA@0.592305, 0 0 0 0 ENSG00000245281.2 ENST00000499554.2 chr8:17942377-17953903 5 1047 10471 exonic -0.67 0 0,1,0 1 0,0,0 0 0.702893706427275 0 0 6.56919109922644 15.557 77.3744030563515 25.7248591347531 15.463 0 0 chimp,human,macaque,marmoset,mouse,orangutan, lincRNA processed_transcript A549@0.136623,AG04450@0.112557,BJ@0.0992185,GM12878@0.060939,H1HESC@0.088183,HELAS3@0.168947,HEPG2@0.143985,HMEC@0.170516,HSMM@0.317868,HUVEC@0,K562@0.174767,MCF7@0.121335,NHEK@0.0687797,NHLF@0.100342,SKNSHRA@0.592305, 0 0 0 0 ENSG00000245281.2 ENST00000517747.1 chr8:17942398-17945001 4 813 1784 exonic -0.67 0 0,1,0 1 0,0,0 0 0 0 0 29.9383408071749 15.557 123.485854858549 59.4495515695067 15.463 0 0 chimp,elephant,human,macaque,opossum,orangutan,rat, lincRNA retained_intron A549@0.136623,AG04450@0.112557,BJ@0.0992185,GM12878@0.060939,H1HESC@0.088183,HELAS3@0.168947,HEPG2@0.143985,HMEC@0.170516,HSMM@0.317868,HUVEC@0,K562@0.174767,MCF7@0.121335,NHEK@0.0687797,NHLF@0.100342,SKNSHRA@0.592305, 0 0 0 0 ENSG00000245281.2 ENST00000521775.1 chr8:17942536-17953416 3 592 10284 intergenic -0.67 0 0,1,1 1 0,0,0 0 0.715674834694671 0 0 6.68864255153637 3.797 42.8158783783784 31.7019642162583 3.853 0 0 chimp,elephant,horse,human,macaque,marmoset,orangutan,panda,pig,rabbit, lincRNA processed_transcript A549@0.136623,AG04450@0.112557,BJ@0.0992185,GM12878@0.060939,H1HESC@0.088183,HELAS3@0.168947,HEPG2@0.143985,HMEC@0.170516,HSMM@0.317868,HUVEC@0,K562@0.174767,MCF7@0.121335,NHEK@0.0687797,NHLF@0.100342,SKNSHRA@0.592305, 0 0 0 0 ENSG00000245281.2 ENST00000517798.1 chr8:17942558-17945550 4 642 2344 intergenic -0.67 0 0,1,0 1 0,0,0 0 0 0 0 22.7858361774744 3.797 126.185358255452 53.3037542662116 3.853 0 0 chimp,cow,dog,elephant,guinea_pig,horse,human,macaque,marmoset,mouse,orangutan,panda,rabbit,rat, lincRNA processed_transcript A549@0.136623,AG04450@0.112557,BJ@0.0992185,GM12878@0.060939,H1HESC@0.088183,HELAS3@0.168947,HEPG2@0.143985,HMEC@0.170516,HSMM@0.317868,HUVEC@0,K562@0.174767,MCF7@0.121335,NHEK@0.0687797,NHLF@0.100342,SKNSHRA@0.592305, 0 0 0 0 ENSG00000187229.3 ENST00000524252.1 chr8:18578415-18591915 3 2051 11445 intronic 1.67 1 1,1,1 0 0,1,0 51.4456362749878 38.5283529925732 31.644 9.45148707947343 29.6028833551769 4.509 11.7913213066797 35.5605941459152 7.417 0 0 chimp,human,macaque,marmoset,orangutan,pig, lincRNA processed_transcript A549@0,AG04450@0.004365,BJ@0.0094255,GM12878@0,H1HESC@0,HELAS3@0.0045515,HEPG2@0,HMEC@0,HSMM@0.0598595,HUVEC@0.527514,K562@0,MCF7@0.002002,NHEK@0.0157217,NHLF@0.0084865,SKNSHRA@0.0085575, 0 0 0 0 ENSG00000253335.1 ENST00000522670.1 chr8:18846789-18858462 3 542 11127 intronic 1.76 0 0,0,0 0 0,0,0 0 1.13687426979419 58.656 0 4.5284443246158 28.787 0 6.93007998562056 38.539 0 0 chimp,dog,guinea_pig,horse,human,macaque,marmoset,orangutan,panda,pig, antisense antisense A549@0.006188,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0.0037755,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000253557.1 ENST00000520920.1 chr8:18942502-19116979 5 556 173913 intergenic 9.05 0 0,0,0 0 0,0,0 13.7553956834532 1.30689482672371 0 37.8273381294964 3.14997153749288 16.575 26.0953237410072 10.3254213313553 18.07 0 0 chimp,dog,elephant,guinea_pig,horse,human,macaque,marmoset,orangutan,rabbit, lincRNA lincRNA A549@0.022528,AG04450@0.02059,BJ@0,GM12878@0,H1HESC@0,HELAS3@0.003125,HEPG2@0,HMEC@0,HSMM@0.0040635,HUVEC@0,K562@0.00377,MCF7@0,NHEK@0,NHLF@0.0697135,SKNSHRA@0.049482, 0 0 0 0 ENSG00000253557.1 ENST00000517949.1 chr8:18944405-19102999 4 558 158030 intergenic 0 0 0,0,0 0 0,0,0 0 1.43824590267671 0 1.97849462365591 3.33958742011011 5.786 1.63440860215054 11.1417515661583 5.984 0 0 cat,chimp,dog,human,macaque,marmoset,orangutan,panda,rabbit, lincRNA lincRNA A549@0.022528,AG04450@0.02059,BJ@0,GM12878@0,H1HESC@0,HELAS3@0.003125,HEPG2@0,HMEC@0,HSMM@0.0040635,HUVEC@0,K562@0.00377,MCF7@0,NHEK@0,NHLF@0.0697135,SKNSHRA@0.049482, 0 0 0 0 ENSG00000254242.1 ENST00000518324.1 chr8:18949243-18972534 3 516 22771 intergenic 0.62 1 0,0,0 0 0,0,0 0 3.40863378859075 0 0 5.41693381933161 0 0 19.0577488911335 0 0 0 chimp,human,macaque,marmoset,orangutan,panda, lincRNA lincRNA A549@0,AG04450@0,BJ@0.023368,GM12878@0.005635,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0.0111535,SKNSHRA@0.0442985, 0 0 0 0 ENSG00000253557.1 ENST00000518417.1 chr8:19041184-19093187 4 719 51278 intergenic -0.27 1 0,0,0 0 0,0,0 3.50486787204451 0.627774094153438 20.72 19.9541029207232 1.72551581574944 45.444 21.7844228094576 6.8617535785327 44.352 0 0 chimp,human,macaque,marmoset,orangutan,panda, lincRNA lincRNA A549@0.022528,AG04450@0.02059,BJ@0,GM12878@0,H1HESC@0,HELAS3@0.003125,HEPG2@0,HMEC@0,HSMM@0.0040635,HUVEC@0,K562@0.00377,MCF7@0,NHEK@0,NHLF@0.0697135,SKNSHRA@0.049482, 0 0 0 0 ENSG00000254201.1 ENST00000519185.1 chr8:19103860-19106750 2 177 2711 intergenic 0 0 0,0,0 0 0,0,0 0 0 0 0 4.65658428624124 5.786 0 10.028033935817 5.984 0 1 chimp,human,macaque,orangutan, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000253280.1 ENST00000521016.1 chr8:19111751-19114844 4 358 2729 intergenic 1.32 0 0,0,0 0 0,0,0 0 0 0 0 0 0 0 0 0 0 0 NA lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000253270.1 ENST00000519803.1 chr8:19536083-19546445 2 465 9895 intronic -1.81 0 0,0,1 0 0,0,0 0 0 0 0 1.70186963112683 0 0 2.86063668519454 0 1 1 chimp,human,macaque,marmoset,orangutan, lincRNA lincRNA A549@0.497777,AG04450@0.010086,BJ@0,GM12878@0,H1HESC@0,HELAS3@0.686979,HEPG2@0.0828865,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0.0088055,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000253775.1 ENST00000519197.1 chr8:19936816-19975953 2 1024 38111 intergenic 3.63 0 0,1,0 0 0,0,0 0 0.876885938442969 0 2.5146484375 1.57096376374275 0 2.6103515625 6.75999055390832 0 0 0 chimp,human,macaque,orangutan,rabbit, antisense antisense A549@0.0042315,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@1.47678,HEPG2@0.183951,HMEC@0.063854,HSMM@0,HUVEC@0,K562@0.0257175,MCF7@0,NHEK@0.021832,NHLF@0,SKNSHRA@0.008853, 0 0 0 0 ENSG00000253733.1 ENST00000523103.1 chr8:20133284-20147969 3 889 13792 intronic -3.18 1 0,0,0 0 0,0,0 18.132733408324 7.40646751740139 31.57 12.6760404949381 5.39037122969838 5.208 10.9786276715411 6.54828886310905 5.565 0 0 chimp,dog,horse,human,macaque,marmoset,orangutan,panda, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0.006003,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000253164.1 ENST00000519159.1 chr8:20207721-20227986 4 441 19818 intergenic 4.06 0 0,0,0 0 0,0,0 0 7.20446059138157 12.387 0 6.26748410535876 34.042 0 6.91946715107478 28.061 0 0 cat,chimp,dog,elephant,human,macaque,marmoset,orangutan, lincRNA lincRNA A549@0,AG04450@0.0133055,BJ@0.00804,GM12878@0.002656,H1HESC@0,HELAS3@0.027272,HEPG2@0,HMEC@0,HSMM@0.010275,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0.0120885, 0 0 0 0 ENSG00000253164.1 ENST00000521139.1 chr8:20207767-20230280 5 754 21751 intergenic 4.06 0 0,0,0 0 0,0,0 0 6.56420394464622 7.315 0 5.71049606914625 25.507 0 6.30453772240357 17.694 0 0 cat,chimp,human,macaque,marmoset,orangutan, lincRNA lincRNA A549@0,AG04450@0.0133055,BJ@0.00804,GM12878@0.002656,H1HESC@0,HELAS3@0.027272,HEPG2@0,HMEC@0,HSMM@0.010275,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0.0120885, 0 0 0 0 ENSG00000253300.1 ENST00000517706.1 chr8:20513202-20557455 2 762 43489 intergenic -1.90 0 0,0,1 0 0,0,0 0 7.45795488514337 51.091 0 10.5998068477086 83.443 0 12.9426521649153 86.836 0 1 human,macaque,orangutan, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0.043317,H1HESC@0.0277225,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0.002975, 0 0 0 0 ENSG00000253300.1 ENST00000518687.1 chr8:20525349-20557645 2 582 31712 intergenic -0.13 0 0,0,0 0 0,0,0 32.2353951890034 10.2276425327952 32.33 9.06872852233677 13.9455411200807 78.165 9.3573883161512 17.1398839556004 81.39 0 0 chimp,cow,guinea_pig,human,macaque,marmoset,orangutan,panda,pig,rabbit, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0.043317,H1HESC@0.0277225,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0.002975, 0 0 0 0 ENSG00000254260.1 ENST00000523496.1 chr8:20798939-20807686 4 564 8177 intergenic -0.60 0 0,0,0 0 0,0,0 0 4.64534670417023 0 0 8.74232603644368 45.907 0 8.76727406139171 53.906 1 1 chimp,human,macaque,marmoset,orangutan, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0.016507,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000254092.1 ENST00000518967.1 chr8:20810156-20831388 2 415 20815 intergenic 1.43 0 0,0,1 0 0,0,0 0 5.19337016574586 0 0 4.45030026423253 0 0 5.41820802306029 0 1 1 chimp,human,macaque,marmoset,orangutan, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0.267033,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000253147.1 ENST00000523852.1 chr8:20810638-20820406 4 870 8892 intergenic 0 0 0,0,0 0 0,0,0 0 1.60368870895187 11.822 0 0.617521367521368 24.349 0 0.792959964012595 25.978 1 1 chimp,human,macaque,marmoset,orangutan, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0.0133845,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000253147.1 ENST00000523035.1 chr8:20811153-20826415 5 671 14583 intergenic 4.26 0 0,0,1 0 0,0,0 70.5335320417288 0.977850922306796 0 50.9254843517139 0.402729205238977 0 51.3859910581222 1.27785777960639 0 0 0 cat,chimp,cow,elephant,guinea_pig,horse,human,macaque,marmoset,orangutan, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0.0133845,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000254026.1 ENST00000519605.1 chr8:20811523-20826415 4 546 14340 intergenic 4.26 0 0,0,1 0 0,0,0 86.6813186813187 0.99442119944212 0 62.5842490842491 0.40955369595537 0 63.1501831501832 1.29951185495119 0 0 0 chimp,horse,human,macaque,marmoset,orangutan, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000253199.1 ENST00000517573.1 chr8:20831308-20832540 2 950 280 intergenic 0.27 0 0,0,0 0 0,0,0 0 0 0 3.48631578947368 0 0 3.58736842105263 0 0 0 0 chimp,guinea_pig,human,macaque,marmoset,mouse,orangutan, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0.0045795,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0.00786,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000253199.1 ENST00000522604.1 chr8:20831497-20852630 5 1639 19486 intergenic -1.38 0 0,0,1 0 0,0,0 0 13.0326388176126 0 0 15.6715590680489 0 1.86394142769982 19.5745150364364 0 0 0 chimp,horse,human,macaque,marmoset,orangutan, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0.0045795,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0.00786,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000254040.1 ENST00000517994.1 chr8:20880807-20886569 4 577 5179 intergenic 0.98 0 0,1,0 0 0,0,0 0 0 16.255 0 7.59528866576559 9.361 0 8.15775246186522 9.802 0 0 chimp,cow,dog,horse,human,macaque,marmoset,orangutan, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000254334.1 ENST00000522755.1 chr8:21155717-21165685 2 605 9361 intergenic 1.31 0 0,0,0 0 0,0,0 33.2892561983471 0 0 54.8429752066116 5.30605704518748 0 54.1322314049587 5.38126268561051 0 0 0 cat,chimp,cow,dog,horse,human,macaque,mouse,orangutan,panda,rat, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000254334.1 ENST00000519996.1 chr8:21155750-21166960 3 1630 9576 intergenic 3.80 0 0,0,0 0 0,0,0 8.94171779141104 0.553467000835422 0 56.6104294478528 5.9281537176274 0 64.0429447852761 6.00187969924812 0 0 0 chimp,cow,horse,human,macaque,orangutan,panda, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000254064.1 ENST00000523556.1 chr8:22112089-22132675 2 513 20071 intergenic 2.15 0 0,0,0 0 0,0,0 0 0 0 0 0.996612027303074 9.634 0 3.00592895221962 10.543 0 1 human,marmoset, antisense antisense A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000251034.1 ENST00000514980.1 chr8:22398358-22402918 2 4074 484 exonic 0.09 0 0,0,1 0 0,0,0 36.8335787923417 62.2190082644628 128.436 20.0193912616593 7.0103305785124 117.498 26.9177712322042 18.9070247933884 124.698 1 1 chimp,human,macaque,marmoset,orangutan, antisense antisense A549@0.03318,AG04450@0.0011555,BJ@0.002943,GM12878@0.001435,H1HESC@0.025885,HELAS3@0.0693695,HEPG2@0.102836,HMEC@0.182819,HSMM@0.0010095,HUVEC@0.008469,K562@0,MCF7@0.004304,NHEK@0.000956,NHLF@0.0018935,SKNSHRA@0.0099265, 0 0 0 0 ENSG00000254230.1 ENST00000517384.1 chr8:22423510-22424684 2 583 589 exonic 4.15 0 0,0,1 0 0,0,0 72.6054888507719 69.46519524618 3.762 161.67409948542 128.344651952462 3.624 169.849056603774 109.820033955857 3.592 0 0 chimp,cow,dog,elephant,guinea_pig,horse,human,macaque,marmoset,mouse,orangutan,panda,pig,rabbit,rat, antisense antisense A549@0.0094755,AG04450@0,BJ@0,GM12878@0,H1HESC@0.0199485,HELAS3@0.0045365,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0.0068735,NHEK@0.00333033,NHLF@0.0231845,SKNSHRA@0.018145, 0 0 0 0 ENSG00000253125.1 ENST00000523627.1 chr8:22547663-22656129 5 565 107893 exonic -8.70 0 0,1,1 0 0,0,0 116.205309734513 60.2192449927243 244.373 130.444247787611 64.4989665687301 266.317 111.562831858407 63.5684428090794 273.459 0 0 chimp,cow,elephant,guinea_pig,horse,human,macaque,marmoset,orangutan,panda,pig, antisense antisense A549@0.0103455,AG04450@0,BJ@0,GM12878@4.62312,H1HESC@0.0012725,HELAS3@0,HEPG2@0,HMEC@0.032657,HSMM@0,HUVEC@0,K562@0.001507,MCF7@1.37812,NHEK@0.0147967,NHLF@0.007169,SKNSHRA@0.03197, 0 0 0 0 ENSG00000253125.1 ENST00000519624.1 chr8:22602131-22603250 2 290 827 intronic -8.70 0 0,0,0 0 0,0,0 0 0 174.429 0 1.79927448609432 98.388 0 1.82103990326481 102.729 0 0 chimp,elephant,human,macaque,orangutan, antisense retained_intron A549@0.0103455,AG04450@0,BJ@0,GM12878@4.62312,H1HESC@0.0012725,HELAS3@0,HEPG2@0,HMEC@0.032657,HSMM@0,HUVEC@0,K562@0.001507,MCF7@1.37812,NHEK@0.0147967,NHLF@0.007169,SKNSHRA@0.03197, 0 0 0 0 ENSG00000253125.1 ENST00000521141.1 chr8:22605016-22615705 4 1626 9057 intronic 3.27 0 1,1,1 0 0,0,0 32.3542435424354 36.06823451474 0 12.8720787207872 39.1309484376725 0 13.7121771217712 43.7525670751905 0 0 0 chimp,dog,elephant,human,macaque,marmoset,orangutan,panda, antisense antisense A549@0.0103455,AG04450@0,BJ@0,GM12878@4.62312,H1HESC@0.0012725,HELAS3@0,HEPG2@0,HMEC@0.032657,HSMM@0,HUVEC@0,K562@0.001507,MCF7@1.37812,NHEK@0.0147967,NHLF@0.007169,SKNSHRA@0.03197, 0 0 0 0 ENSG00000248738.2 ENST00000520914.1 chr8:22735485-22741652 4 568 5593 intronic -11.12 0 0,0,0 0 0,0,0 0 30.4360808153048 42.955 4.80281690140845 41.0793849454675 15.772 0 46.1051314142678 32.931 0 1 chimp,human,marmoset,orangutan, antisense antisense A549@0,AG04450@0,BJ@0,GM12878@1.31226,H1HESC@0.139132,HELAS3@0,HEPG2@0.0021095,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0.00053,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000248738.2 ENST00000511897.1 chr8:22735497-22745535 4 3875 6157 intronic 6.42 0 0,0,1 0 0,0,0 17.4095483870968 27.648042878025 42.955 10.7723870967742 37.3163878512262 15.772 8.10012903225806 41.8817605976937 32.931 0 1 chimp,human,macaque, antisense antisense A549@0,AG04450@0,BJ@0,GM12878@1.31226,H1HESC@0.139132,HELAS3@0,HEPG2@0.0021095,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0.00053,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000248738.2 ENST00000522019.1 chr8:22735655-22741933 3 563 5711 intronic 0.16 0 0,1,1 0 0,0,0 119.825932504441 29.8072141481352 42.955 74.1438721136767 40.2306075993696 15.772 55.7513321492007 45.1525126947995 32.931 0 0 cat,chimp,cow,dog,elephant,human,macaque,marmoset,mouse,orangutan,rat, antisense antisense A549@0,AG04450@0,BJ@0,GM12878@1.31226,H1HESC@0.139132,HELAS3@0,HEPG2@0.0021095,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0.00053,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000253142.1 ENST00000522805.1 chr8:22752947-22755326 2 896 1481 intronic 0.31 0 0,0,0 0 0,0,0 0 5.34773801485483 0 0 0 0 0 0 0 0 0 cat,chimp,guinea_pig,human,macaque,marmoset,mouse,orangutan,panda,pig, sense_intronic sense_intronic A549@0.0032195,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000245025.2 ENST00000523884.1 chr8:22842109-22865044 2 469 22464 exonic -6.52 0 0,0,0 0 0,0,0 170.507462686567 51.6282051282051 187.206 344.221748400853 57.8189992877493 193.967 299.972281449893 58.7667824074074 197.804 0 0 chimp,cow,elephant,guinea_pig,horse,human,macaque,marmoset,mouse,orangutan,pig,rat, lincRNA processed_transcript A549@0.249874,AG04450@0.271732,BJ@0.203413,GM12878@0.145593,H1HESC@0.127792,HELAS3@0.119174,HEPG2@0.17648,HMEC@0.087471,HSMM@0.591352,HUVEC@0.281118,K562@0.018988,MCF7@0.249964,NHEK@0.136112,NHLF@1.58339,SKNSHRA@0.368743, 1 96 0 0 ENSG00000245025.2 ENST00000502083.2 chr8:22863894-22876848 2 1943 11009 exonic 12.92 0 1,1,1 0 0,0,0 336 22.3018439458625 0 344.624292331446 629.493505313834 41.964 340.639217704581 33.4123898628395 38.565 0 0 cat,chimp,cow,dog,elephant,guinea_pig,horse,human,marmoset,mouse,opossum,orangutan,panda,pig,rabbit,rat, lincRNA processed_transcript A549@0.249874,AG04450@0.271732,BJ@0.203413,GM12878@0.145593,H1HESC@0.127792,HELAS3@0.119174,HEPG2@0.17648,HMEC@0.087471,HSMM@0.591352,HUVEC@0.281118,K562@0.018988,MCF7@0.249964,NHEK@0.136112,NHLF@1.58339,SKNSHRA@0.368743, 0 0 0 0 ENSG00000246130.1 ENST00000501897.1 chr8:22925742-22941132 3 2633 12753 intronic 3.47 0 0,1,0 0 0,0,0 0 0 0 7.54728446638815 0 0 8.03949867071781 0 0 1 1 chimp,human,macaque,marmoset,orangutan, lincRNA processed_transcript A549@0.0527525,AG04450@0.0328105,BJ@0.0324025,GM12878@0.041702,H1HESC@0.35218,HELAS3@0.0224635,HEPG2@0.030064,HMEC@0.034174,HSMM@0.016285,HUVEC@0.023769,K562@0.010046,MCF7@0.050371,NHEK@0.0539417,NHLF@0.025003,SKNSHRA@0.090352, 0 0 0 0 ENSG00000253616.1 ENST00000520840.1 chr8:22928890-22932001 2 482 2627 intergenic -1.59 0 0,1,1 0 0,0,0 0 0 0 0 0 0 0 0 0 0 0 chimp,horse,human,macaque,marmoset,orangutan, antisense antisense A549@1.2975,AG04450@0.836309,BJ@0.134217,GM12878@0.792908,H1HESC@0.123531,HELAS3@2.92122,HEPG2@2.33089,HMEC@0.087682,HSMM@0.0132125,HUVEC@0.123276,K562@0.165834,MCF7@0.121805,NHEK@0.197003,NHLF@1.05004,SKNSHRA@0.342342, 0 0 0 0 ENSG00000253616.1 ENST00000523806.1 chr8:22929542-22932001 2 448 2009 intergenic 0 0 0,1,0 0 0,0,0 0 0 0 0 0 0 0 0 0 0 0 chimp,horse,human,macaque,marmoset,orangutan,pig, antisense antisense A549@1.2975,AG04450@0.836309,BJ@0.134217,GM12878@0.792908,H1HESC@0.123531,HELAS3@2.92122,HEPG2@2.33089,HMEC@0.087682,HSMM@0.0132125,HUVEC@0.123276,K562@0.165834,MCF7@0.121805,NHEK@0.197003,NHLF@1.05004,SKNSHRA@0.342342, 0 0 0 0 ENSG00000253930.1 ENST00000518308.1 chr8:23046792-23048188 2 635 759 exonic -7.92 1 0,0,0 0 0,0,0 0 0 0 0 0 0 0 0 0 0 1 chimp,human,macaque,orangutan, antisense antisense A549@0,AG04450@0,BJ@0,GM12878@0.004591,H1HESC@0,HELAS3@0.003547,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0.00305833,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000246582.2 ENST00000517774.1 chr8:23081984-23083395 2 497 912 exonic 0 0 0,1,0 0 0,0,0 0 0 0 0 0 0 0 0 0 0 0 chimp,elephant,horse,human,macaque,marmoset,orangutan, antisense antisense A549@1.90167,AG04450@0.207479,BJ@0.0297805,GM12878@3.31762,H1HESC@1.31689,HELAS3@2.52874,HEPG2@1.76853,HMEC@1.68528,HSMM@0.032757,HUVEC@0.891881,K562@3.42624,MCF7@1.09963,NHEK@0.807512,NHLF@0.24313,SKNSHRA@0.287712, 0 0 0 0 ENSG00000250714.2 ENST00000519563.1 chr8:23082733-23087616 2 444 4437 intergenic 0 0 0,0,1 0 0,0,0 0 0 0 0 0 0 0 0 0 1 1 chimp,human,macaque,marmoset,orangutan, antisense antisense A549@0.044246,AG04450@0,BJ@0,GM12878@0.00452,H1HESC@0,HELAS3@0.017852,HEPG2@0.0175635,HMEC@0.009181,HSMM@0,HUVEC@0.067512,K562@0.018041,MCF7@0,NHEK@0.019774,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000246582.2 ENST00000500853.1 chr8:23082734-23088439 3 1967 3734 intergenic 4.07 0 1,1,1 1 0,0,0 0 0 0 0 0 0 0 0 0 0 0 human, antisense antisense A549@1.90167,AG04450@0.207479,BJ@0.0297805,GM12878@3.31762,H1HESC@1.31689,HELAS3@2.52874,HEPG2@1.76853,HMEC@1.68528,HSMM@0.032757,HUVEC@0.891881,K562@3.42624,MCF7@1.09963,NHEK@0.807512,NHLF@0.24313,SKNSHRA@0.287712, 0 0 0 0 ENSG00000250714.2 ENST00000511929.2 chr8:23082746-23088428 2 1123 4557 intergenic -0.10 0 1,1,1 0 0,0,0 0 0 0 0 0 0 0 0 0 0 1 chimp,human,marmoset,orangutan, antisense antisense A549@0.044246,AG04450@0,BJ@0,GM12878@0.00452,H1HESC@0,HELAS3@0.017852,HEPG2@0.0175635,HMEC@0.009181,HSMM@0,HUVEC@0.067512,K562@0.018041,MCF7@0,NHEK@0.019774,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000246582.2 ENST00000522600.1 chr8:23083147-23085720 2 630 1941 intergenic 4.36 0 0,0,1 0 0,0,0 0 0 0 0 0 0 0 0 0 0 1 human,macaque,marmoset, antisense retained_intron A549@1.90167,AG04450@0.207479,BJ@0.0297805,GM12878@3.31762,H1HESC@1.31689,HELAS3@2.52874,HEPG2@1.76853,HMEC@1.68528,HSMM@0.032757,HUVEC@0.891881,K562@3.42624,MCF7@1.09963,NHEK@0.807512,NHLF@0.24313,SKNSHRA@0.287712, 0 0 0 0 ENSG00000253837.1 ENST00000517420.1 chr8:23193684-23199049 2 1796 3567 exonic 12.41 0 1,1,1 1 0,0,0 25.8530066815145 0 0 38.6046770601336 3.64592094196804 0 44.6330734966592 4.51808242220353 2.187 0 0 chimp,human,macaque,orangutan,panda, antisense retained_intron A549@0.00559,AG04450@0.284748,BJ@0.409304,GM12878@0.372324,H1HESC@0.0208985,HELAS3@0.002775,HEPG2@0.0158505,HMEC@0.261794,HSMM@0.279848,HUVEC@0.391006,K562@0.006037,MCF7@0,NHEK@0.01776,NHLF@0.182803,SKNSHRA@0.782995, 0 0 0 0 ENSG00000253837.1 ENST00000519692.1 chr8:23193721-23223638 3 4371 25542 exonic 7.37 1 0,1,0 1 0,0,0 16.7998169755205 7.80299115182836 0 23.3191489361702 11.1568005637773 0 23.7938686799359 12.6432542479054 2.187 0 1 chimp,human,macaque,orangutan, antisense antisense A549@0.00559,AG04450@0.284748,BJ@0.409304,GM12878@0.372324,H1HESC@0.0208985,HELAS3@0.002775,HEPG2@0.0158505,HMEC@0.261794,HSMM@0.279848,HUVEC@0.391006,K562@0.006037,MCF7@0,NHEK@0.01776,NHLF@0.182803,SKNSHRA@0.782995, 0 0 0 0 ENSG00000253390.1 ENST00000521021.1 chr8:23316114-23342484 2 628 25740 intergenic -4.29 0 0,0,0 0 0,0,0 0 0 0 0 3.32385392385392 10.407 0 16.7625874125874 10.582 0 0 cat,chimp,human,macaque,marmoset,orangutan, lincRNA lincRNA A549@0.214152,AG04450@0.108234,BJ@0.0811985,GM12878@0.226355,H1HESC@0.0979645,HELAS3@0.29314,HEPG2@0.174004,HMEC@0.032497,HSMM@0.188087,HUVEC@0.0415285,K562@0.586576,MCF7@0.0159565,NHEK@0.146351,NHLF@0.159965,SKNSHRA@0.505376, 0 0 0 0 ENSG00000253986.1 ENST00000518590.1 chr8:23350522-23351711 2 713 474 intergenic -0.57 0 0,1,0 0 0,0,0 0 0 15.057 0 0 8.058 0 0 8.237 0 0 chimp,elephant,horse,human,macaque,marmoset,orangutan,panda, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0.304318,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000253471.1 ENST00000523874.1 chr8:23564654-23647000 3 249 82093 intergenic 0 0 0,1,0 0 0,0,0 0 2.19655756276418 0 4.33734939759036 5.31120802017224 15.607 4.36947791164659 6.21535331879697 29.488 1 1 chimp,human,macaque,marmoset,orangutan, antisense antisense A549@0,AG04450@0.0216895,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0.009046,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000254002.1 ENST00000520375.1 chr8:23583844-23600555 3 440 16267 intergenic -0.13 0 0,0,0 0 0,0,0 0 0 0 0 1.57361529476855 0 0 1.91627220753673 19.287 1 1 chimp,human,macaque,marmoset,orangutan, lincRNA lincRNA A549@0.0222695,AG04450@0.063687,BJ@0.01102,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0.102047,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0.01752,SKNSHRA@0.010243, 0 0 0 0 ENSG00000253891.1 ENST00000521681.1 chr8:24027470-24034593 3 488 6631 intergenic 0 0 0,1,0 0 0,0,0 0 0 0 13.7991803278689 0.634595083697783 0 21.2766393442623 1.44035590408686 0 0 0 cat,chimp,elephant,horse,human,macaque,mouse,orangutan,panda,pig,rabbit, lincRNA lincRNA A549@0.0168765,AG04450@0,BJ@0,GM12878@0.07178,H1HESC@0.0050395,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0.020953,HUVEC@0,K562@0.005002,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000253535.1 ENST00000518988.1 chr8:24153327-24245028 4 737 90958 intronic -4.40 0 0,1,0 0 0,0,0 0 1.79423470173047 0 0 8.11387673431694 0 0 9.80088612326568 0 0 0 chimp,dog,human,macaque,pig, antisense antisense A549@0,AG04450@0,BJ@0,GM12878@0.230189,H1HESC@0.0345035,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0.003534,SKNSHRA@0.0664375, 0 0 0 0 ENSG00000253535.1 ENST00000523700.1 chr8:24153404-24244837 3 566 90863 intronic 0 0 0,0,1 0 0,0,0 0 1.79611062808844 0 0 8.12236003653853 0 0 9.81113324455499 0 0 0 cat,chimp,cow,dog,elephant,horse,human,macaque,marmoset,orangutan,pig,rabbit, antisense antisense A549@0,AG04450@0,BJ@0,GM12878@0.230189,H1HESC@0.0345035,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0.003534,SKNSHRA@0.0664375, 0 0 0 0 ENSG00000253535.1 ENST00000523578.1 chr8:24158398-24406131 4 542 247185 intronic -0.88 0 0,1,0 0 0,0,0 56.9335793357934 2.71609118676295 53.793 11.8782287822878 7.54610109836762 58.422 9.30073800738007 8.57328721402998 54.26 0 0 chimp,guinea_pig,human,macaque,marmoset,orangutan,rabbit, antisense antisense A549@0,AG04450@0,BJ@0,GM12878@0.230189,H1HESC@0.0345035,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0.003534,SKNSHRA@0.0664375, 0 0 0 0 ENSG00000253535.1 ENST00000519689.1 chr8:24158398-24769586 5 646 610534 intronic -0.88 0 0,0,0 0 0,0,0 0 4.23796381528302 43.674 0 7.92684436902776 90.266 0 8.84679641101069 88.16 1 1 chimp,human,macaque,marmoset,orangutan, antisense antisense A549@0,AG04450@0,BJ@0,GM12878@0.230189,H1HESC@0.0345035,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0.003534,SKNSHRA@0.0664375, 0 0 0 0 ENSG00000253643.1 ENST00000519364.1 chr8:24347825-24372341 5 897 23611 exonic 1.54 1 0,0,1 0 0,0,0 35.4448160535117 2.67527847189869 0 64.577480490524 9.32434034983694 0 77.3935340022296 10.8028461310406 0 0 0 chimp,cow,elephant,human,macaque,marmoset,orangutan,panda,rabbit,rat, antisense antisense A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0.007271,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0.0450165, 0 0 0 0 ENSG00000253643.1 ENST00000517428.1 chr8:24369135-24372101 2 501 2463 intronic -0.54 1 0,0,0 0 0,0,0 0 6.58465286236297 12.079 7.40119760479042 14.6390580592773 21.512 9.92215568862276 16.6264717823792 26.472 1 1 chimp,human,macaque,marmoset,orangutan, antisense antisense A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0.007271,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0.0450165, 0 0 0 0 ENSG00000253643.1 ENST00000520256.1 chr8:24369135-24372342 2 575 2630 intronic -2.52 1 0,0,0 0 0,0,0 21.0069565217391 6.16653992395437 0 43.8608695652174 13.7095057034221 0 54.6834782608696 15.5707224334601 0 0 0 cat,chimp,dog,guinea_pig,horse,human,macaque,marmoset,orangutan,panda,pig,rabbit, antisense antisense A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0.007271,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0.0450165, 0 0 0 0 ENSG00000253643.1 ENST00000519893.1 chr8:24369143-24372326 3 429 2750 intronic -2.52 1 0,0,0 0 0,0,0 1.1981351981352 10.0094545454545 0 14.7062937062937 19.8829090909091 0 19.1515151515151 23.2301818181818 0 0 0 chimp,guinea_pig,horse,human,macaque,marmoset,orangutan,panda,pig,rabbit, antisense antisense A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0.007271,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0.0450165, 0 0 0 0 ENSG00000253832.1 ENST00000522570.1 chr8:24849516-24867292 3 600 17172 intergenic 6.13 0 0,1,0 0 0,0,0 0 10.16928721174 0 0 13.8238411367342 0 0 14.612916375495 0 0 0 chimp,dog,elephant,horse,human,macaque,orangutan,panda,pig,rabbit, lincRNA lincRNA A549@0.0183225,AG04450@0,BJ@0,GM12878@0,H1HESC@0.0068805,HELAS3@0.03075,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0.0167615, 0 0 0 0 ENSG00000253476.1 ENST00000523840.1 chr8:25283037-25284096 2 526 531 intergenic -2.42 0 0,0,0 0 0,0,0 0 0 0 0 18.8851224105461 15.614 0 20.0207156308851 18.675 1 1 chimp,human,macaque,marmoset,orangutan, lincRNA lincRNA A549@1.02176,AG04450@1.19352,BJ@1.30789,GM12878@1.53785,H1HESC@0.584591,HELAS3@1.12533,HEPG2@1.83527,HMEC@0.100815,HSMM@0.230328,HUVEC@0.837052,K562@2.15363,MCF7@0.712059,NHEK@0.848966,NHLF@0.285703,SKNSHRA@0.912702, 0 0 0 0 ENSG00000253100.1 ENST00000517964.1 chr8:25543314-25545040 2 1129 595 intergenic -2.81 0 0,0,1 0 0,0,0 0 0 84.987 0 0 155.028 0 0 141.422 0 0 cat,chimp,cow,elephant,human,macaque,marmoset,orangutan,panda,pig, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0.015439,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000253342.1 ENST00000522524.1 chr8:25634195-25634972 2 463 312 intergenic -2.10 0 0,0,0 0 0,0,0 0 0 0 0 0 10.488 0 0 10.792 0 0 horse,human,macaque,marmoset,orangutan, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0.0228425,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000254178.1 ENST00000520386.1 chr8:25691645-25697651 2 483 5521 intergenic -12.99 1 0,0,0 0 0,0,0 0 12.528527440681 0 0 17.6125701865604 0 0 19.7004165911972 2.673 0 0 cat,chimp,dog,elephant,guinea_pig,horse,human,macaque,marmoset,orangutan,panda, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0.0041565,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0.047741,SKNSHRA@0, 0 0 0 0 ENSG00000253430.1 ENST00000522547.1 chr8:26280109-26281445 2 506 828 intronic -15.59 0 0,0,1 0 0,0,0 0 0 0 0 0 0 0 0 0 1 1 chimp,human,macaque,marmoset,orangutan, sense_intronic sense_intronic A549@0.023088,AG04450@0.01711,BJ@0,GM12878@0.013949,H1HESC@0,HELAS3@0.0090825,HEPG2@0.0083155,HMEC@0,HSMM@0,HUVEC@0.0127095,K562@0.0117515,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0.008857, 0 0 0 0 ENSG00000254362.1 ENST00000518031.1 chr8:26298007-26300111 4 564 1534 intronic -9.70 0 0,0,0 0 0,0,0 0 0 0 0 0 4.712 0 0 4.921 0 1 chimp,human,macaque,orangutan, sense_intronic sense_intronic A549@0.011937,AG04450@0,BJ@0.0245235,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0.0179855,HMEC@0,HSMM@0,HUVEC@0.0209765,K562@0.01868,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0.0103935, 0 0 0 0 ENSG00000253888.1 ENST00000521408.1 chr8:27041838-27068011 3 582 25587 intergenic 0.29 0 0,0,0 0 0,0,0 0 0 0 0 2.48356587329503 0 0 3.27455348419119 0 0 0 chimp,elephant,human,macaque,marmoset,orangutan, antisense antisense A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0.0148765,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0.0068735,NHEK@0,NHLF@0,SKNSHRA@0.240005, 0 0 0 0 ENSG00000253875.1 ENST00000521510.1 chr8:27590855-27613943 4 580 22502 exonic -4.49 0 0,1,0 0 0,0,0 17.2810344827586 14.4254288507688 5.911 0 18.0127544218292 7.905 0 20.6568305039552 7.893 0 0 chimp,cow,human,macaque,marmoset,orangutan, antisense antisense A549@0.0131765,AG04450@0.0446165,BJ@0,GM12878@0,H1HESC@0,HELAS3@0.019744,HEPG2@0.004671,HMEC@0,HSMM@0,HUVEC@0.0236145,K562@0,MCF7@0,NHEK@0,NHLF@0.010023,SKNSHRA@0.007777, 0 0 0 0 ENSG00000253397.1 ENST00000517735.1 chr8:27761998-27767827 3 356 5469 exonic 6.88 1 0,1,0 0 0,0,0 0 8.46333881879685 0 0 24.4680928871823 0 0 23.1603583836167 84.104 0 0 chimp,dog,human,macaque,marmoset,orangutan, antisense antisense A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0.192678,HEPG2@0.007598,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000253690.1 ENST00000521731.1 chr8:28107580-28196772 2 885 88305 exonic 4.78 0 0,1,0 1 0,0,0 27.7966101694915 7.18880018119019 139.66 62.7853107344633 12.806545495725 200.512 54.3796610169492 21.7556423758564 209.422 0 0 chimp,human,macaque,marmoset,orangutan,rabbit, antisense antisense A549@0,AG04450@0,BJ@0,GM12878@0.733987,H1HESC@0.0125955,HELAS3@0,HEPG2@0.003075,HMEC@0,HSMM@0.0200595,HUVEC@0,K562@0.0030185,MCF7@0.004636,NHEK@0,NHLF@0,SKNSHRA@0.0207565, 0 0 0 0 ENSG00000254370.1 ENST00000522589.1 chr8:28273041-28277572 2 509 4020 intergenic 0.27 0 0,0,1 0 0,0,0 0 0 0 4.77406679764244 1.1092039800995 0 4.80943025540275 1.1092039800995 0 0 0 chimp,cow,elephant,human,macaque,marmoset,orangutan,rabbit, sense_intronic sense_intronic A549@0.0240615,AG04450@0,BJ@0,GM12878@0.009958,H1HESC@0.0175745,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0.007139,NHEK@0,NHLF@0,SKNSHRA@0.023558, 0 0 0 0 ENSG00000253567.1 ENST00000523935.1 chr8:28304781-28313204 3 440 7979 exonic 5.29 0 0,1,0 0 0,0,0 0 4.72740944980574 24.38 16.7977272727273 11.7307933324978 37.292 13.5340909090909 13.8289259305677 38.02 0 0 cat,chimp,cow,elephant,guinea_pig,horse,human,macaque,marmoset,orangutan,panda,pig, antisense antisense A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000253567.1 ENST00000518819.1 chr8:28306471-28313419 2 430 6516 intronic -0.21 0 0,0,0 0 0,0,0 0 5.78882750153468 0 15.1674418604651 14.3646408839779 0 15 16.9338551258441 0 0 0 cat,chimp,cow,dog,elephant,guinea_pig,human,macaque,orangutan,pig, antisense antisense A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000246339.3 ENST00000501224.2 chr8:28553718-28558836 2 3686 1430 intronic 4.12 0 0,1,1 0 0,0,0 2.74552360282149 0 31.57 4.44628323385784 1.56083916083916 53.081 5.02685838307108 2.40909090909091 70.597 0 1 chimp,human,orangutan, lincRNA retained_intron A549@0.424545,AG04450@0.0711705,BJ@0.0752025,GM12878@0.359861,H1HESC@0.310823,HELAS3@0.266288,HEPG2@0.15896,HMEC@0.059172,HSMM@0.063003,HUVEC@0.138297,K562@0.221496,MCF7@0.398694,NHEK@0.077916,NHLF@0.0207195,SKNSHRA@0.932631, 0 0 0 0 ENSG00000246339.3 ENST00000523789.1 chr8:28555729-28558047 3 539 1775 intronic -0.89 0 0,0,0 0 0,0,0 0 0 6.027 10.1187384044527 2.73915492957746 26.851 13.4526901669759 3.47323943661972 27.609 0 0 chimp,dog,elephant,guinea_pig,horse,human,macaque,marmoset,orangutan,panda, lincRNA processed_transcript A549@0.424545,AG04450@0.0711705,BJ@0.0752025,GM12878@0.359861,H1HESC@0.310823,HELAS3@0.266288,HEPG2@0.15896,HMEC@0.059172,HSMM@0.063003,HUVEC@0.138297,K562@0.221496,MCF7@0.398694,NHEK@0.077916,NHLF@0.0207195,SKNSHRA@0.932631, 0 0 0 0 ENSG00000246339.3 ENST00000520023.1 chr8:28555920-28558981 3 777 2280 exonic 0 0 0,1,0 0 0,0,0 0 0 31.57 10.7027027027027 3.70833333333333 50.829 14.1068211068211 3.78947368421053 69.091 1 1 chimp,human,macaque,marmoset,orangutan, lincRNA processed_transcript A549@0.424545,AG04450@0.0711705,BJ@0.0752025,GM12878@0.359861,H1HESC@0.310823,HELAS3@0.266288,HEPG2@0.15896,HMEC@0.059172,HSMM@0.063003,HUVEC@0.138297,K562@0.221496,MCF7@0.398694,NHEK@0.077916,NHLF@0.0207195,SKNSHRA@0.932631, 0 0 0 0 ENSG00000246339.3 ENST00000519870.1 chr8:28557642-28558770 2 891 235 intronic 0.30 0 0,0,1 0 0,0,0 0 0 31.57 7.81930415263749 0 53.081 8.00673400673401 0 64.821 0 0 cat,chimp,elephant,human,macaque,marmoset, lincRNA retained_intron A549@0.424545,AG04450@0.0711705,BJ@0.0752025,GM12878@0.359861,H1HESC@0.310823,HELAS3@0.266288,HEPG2@0.15896,HMEC@0.059172,HSMM@0.063003,HUVEC@0.138297,K562@0.221496,MCF7@0.398694,NHEK@0.077916,NHLF@0.0207195,SKNSHRA@0.932631, 0 0 0 0 ENSG00000254034.1 ENST00000520055.1 chr8:28655659-28656986 2 546 779 intronic -4.95 0 0,0,0 0 0,0,0 0 0 0 0 0 0 6.67582417582418 0 0 1 1 chimp,human,macaque,marmoset,orangutan, antisense antisense A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0.00841433,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000247743.1 ENST00000499250.1 chr8:28779448-28922453 2 6109 136894 intronic 5.30 0 0,1,1 0 0,0,0 108.001309543297 31.4180606892924 16.554 115.205761990506 31.4649948135053 4.849 122.441152398101 33.9079725919324 6.388 1 1 chimp,human,macaque,marmoset,orangutan, lincRNA lincRNA A549@0.0429115,AG04450@0.0246685,BJ@0.0031725,GM12878@0.0914745,H1HESC@0.0156285,HELAS3@0.069534,HEPG2@0.060191,HMEC@0,HSMM@0.0173785,HUVEC@0.0385625,K562@0.016541,MCF7@0.0267815,NHEK@0.012284,NHLF@0.0003195,SKNSHRA@0.075095, 0 0 0 0 ENSG00000254129.1 ENST00000523661.1 chr8:28968090-28998198 3 454 29650 exonic 3.93 0 0,0,0 0 0,0,0 59.9867841409692 23.1363575042159 0 143.431718061674 39.725328836425 45.74 164.623348017621 43.8775379426644 53.65 0 0 cat,chimp,cow,dog,elephant,horse,human,macaque,marmoset,orangutan,rat, antisense antisense A549@0,AG04450@0.004927,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0.016881, 0 0 0 0 ENSG00000254129.1 ENST00000517632.1 chr8:28997561-28998246 2 476 207 exonic -1.51 0 0,0,0 0 0,0,0 81.8172268907563 0 0 193.468487394958 0 0 226.638655462185 0 19.544 0 0 cat,chimp,cow,dog,elephant,guinea_pig,horse,human,macaque,marmoset,mouse,orangutan,panda,pig,rabbit,rat, antisense antisense A549@0,AG04450@0.004927,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0.016881, 0 0 0 0 ENSG00000253632.1 ENST00000521101.1 chr8:29384829-29387840 2 640 2369 intergenic -4.83 0 0,1,1 0 0,0,0 0 0 31.354 9.746875 3.34022794428029 18.901 13.2640625 3.47066272688898 19.521 0 0 cat,chimp,cow,dog,elephant,horse,human,macaque,marmoset,orangutan,panda,pig, lincRNA lincRNA A549@0.0105065,AG04450@0,BJ@0.0076695,GM12878@1.72043,H1HESC@0.004629,HELAS3@0,HEPG2@0,HMEC@0.070157,HSMM@0,HUVEC@0,K562@0,MCF7@0.0797175,NHEK@0.00822567,NHLF@0,SKNSHRA@0.034651, 0 0 0 0 ENSG00000253182.1 ENST00000522028.1 chr8:29405688-29421858 2 562 15606 intergenic 5.70 0 0,0,0 0 0,0,0 69.7580071174377 11.4833397411252 132.896 9.53736654804271 13.5641419966679 240.402 20.7402135231317 15.3019351531462 242.91 0 0 cat,chimp,cow,horse,human,macaque,marmoset,orangutan,panda,rabbit, lincRNA lincRNA A549@0.111044,AG04450@0,BJ@0,GM12878@0.210949,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0.06534,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0.220835,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000251191.2 ENST00000518623.1 chr8:29531438-29592739 4 934 60361 intergenic 6.44 1 1,1,1 0 0,0,0 68.9796573875803 4.76494756548102 0 53.1252676659529 5.80737562333295 2.232 54.0738758029979 7.32878845612233 2.259 0 0 chimp,dog,elephant,guinea_pig,horse,human,macaque,marmoset,mouse,orangutan,pig,rabbit, lincRNA lincRNA A549@0.0412335,AG04450@0,BJ@0.00258,GM12878@0.015513,H1HESC@0.0020805,HELAS3@0.005394,HEPG2@0.005028,HMEC@0.10551,HSMM@0.0664785,HUVEC@0.0370275,K562@0,MCF7@0.106623,NHEK@0.448805,NHLF@0.001379,SKNSHRA@1.05705, 0 0 0 0 ENSG00000251191.2 ENST00000506121.2 chr8:29578775-29605625 4 1395 25449 intergenic 6.44 0 0,0,1 0 0,0,0 0 5.42131321466462 0 1.13118279569892 12.9565798263193 0 1.16989247311828 14.8144917285552 0 0 0 chimp,dog,guinea_pig,horse,human,macaque,marmoset,orangutan,panda,pig, lincRNA lincRNA A549@0.0412335,AG04450@0,BJ@0.00258,GM12878@0.015513,H1HESC@0.0020805,HELAS3@0.005394,HEPG2@0.005028,HMEC@0.10551,HSMM@0.0664785,HUVEC@0.0370275,K562@0,MCF7@0.106623,NHEK@0.448805,NHLF@0.001379,SKNSHRA@1.05705, 0 0 0 0 ENSG00000253490.1 ENST00000522158.1 chr8:29605825-29609813 3 2977 1007 intergenic 3.22 1 0,0,0 0 0,0,0 0 0 0 1.45179711118576 4.05163853028798 1.673 2.65300638226402 4.21052631578947 1.701 1 1 chimp,human,macaque,marmoset,orangutan, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0.005905,H1HESC@0,HELAS3@0.0068425,HEPG2@0.0018305,HMEC@0,HSMM@0.0006905,HUVEC@0.013551,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0.001201, 0 0 0 0 ENSG00000253490.1 ENST00000523123.1 chr8:29605841-29656006 4 2311 47848 intergenic 2.17 1 0,0,0 0 0,0,0 36.3842492427521 6.63216853369002 0 45.1241886629165 8.83932452767096 1.673 45.2470791864994 9.96304965724795 1.701 0 0 chimp,elephant,human,macaque,marmoset,orangutan, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0.005905,H1HESC@0,HELAS3@0.0068425,HEPG2@0.0018305,HMEC@0,HSMM@0.0006905,HUVEC@0.013551,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0.001201, 0 0 0 0 ENSG00000253490.1 ENST00000517491.1 chr8:29605866-29656008 4 2787 47349 intergenic 3.30 1 0,0,0 0 0,0,0 30.1700753498385 6.70206340155019 0 39.1324004305705 8.83152759297979 1.673 39.3204162181557 9.96202665315001 1.701 0 1 chimp,human,macaque,orangutan, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0.005905,H1HESC@0,HELAS3@0.0068425,HEPG2@0.0018305,HMEC@0,HSMM@0.0006905,HUVEC@0.013551,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0.001201, 0 0 0 0 ENSG00000248964.2 ENST00000507496.1 chr8:29672520-29686020 3 1864 11632 intergenic 13.50 0 1,1,1 0 0,0,0 115.843347639485 6.71595598349381 13.373 94.7687768240343 11.8746561210454 21.224 107.017167381974 16.3989855570839 22.094 0 0 cat,chimp,dog,elephant,guinea_pig,human,panda,pig, lincRNA lincRNA A549@0.0018465,AG04450@0.0045565,BJ@0.0118875,GM12878@0,H1HESC@0.0109865,HELAS3@0.015512,HEPG2@0.035359,HMEC@0.049542,HSMM@0.28767,HUVEC@0,K562@0,MCF7@0.005467,NHEK@0.20566,NHLF@0.00676,SKNSHRA@0.024463, 0 0 0 0 ENSG00000248964.2 ENST00000517356.1 chr8:29672520-29712059 3 1493 38042 intergenic 0.44 0 0,0,1 0 0,0,0 133.797722705961 8.07460175595395 0 101.87876758205 12.5385363545555 0 117.275284661755 14.8878870721834 0 0 0 cat,chimp,cow,dog,elephant,guinea_pig,horse,human,macaque,marmoset,mouse,orangutan,panda,pig,rabbit, lincRNA lincRNA A549@0.0018465,AG04450@0.0045565,BJ@0.0118875,GM12878@0,H1HESC@0.0109865,HELAS3@0.015512,HEPG2@0.035359,HMEC@0.049542,HSMM@0.28767,HUVEC@0,K562@0,MCF7@0.005467,NHEK@0.20566,NHLF@0.00676,SKNSHRA@0.024463, 0 0 0 0 ENSG00000254086.1 ENST00000522967.1 chr8:29722160-29729177 2 562 6453 intergenic 0.66 0 0,0,0 0 0,0,0 0 2.03703703703704 18.642 0 4.36386176971951 20.584 0 5.03161320316132 22.576 0 0 chimp,horse,human,macaque,marmoset,orangutan,panda, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0.003648,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000253604.1 ENST00000521908.1 chr8:29763251-29766472 2 548 2671 intergenic 0 0 0,0,0 0 0,0,0 0 70.4859603144889 83.281 0 81.9816548109322 116.631 0 79.9075252714339 122.092 0 1 human,marmoset,orangutan, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000253279.1 ENST00000524059.1 chr8:29779029-29810153 3 1867 29253 intergenic 8.36 0 0,0,1 0 0,0,0 0 8.46719994530476 0 0 9.51242607595802 0 0 16.436673161727 0 1 1 chimp,human,macaque,marmoset,orangutan, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000253279.1 ENST00000521245.1 chr8:29779335-29811240 3 2648 29253 intergenic 8.36 1 0,0,1 0 0,0,0 0 8.46719994530476 0 0 9.51242607595802 0 0 16.436673161727 0 0 1 chimp,human,marmoset,orangutan, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000253708.1 ENST00000523733.1 chr8:30034070-30038404 2 581 3751 exonic -12.38 0 0,1,1 0 0,0,0 0 28.8147160757131 0 5.26678141135972 44.6302319381498 4.335 5.61790017211704 41.9909357504665 4.624 0 0 chimp,human,macaque,marmoset,orangutan,rabbit, antisense antisense A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000254109.1 ENST00000517521.1 chr8:30239635-30242917 3 906 2372 exonic 5.01 1 1,1,1 1 0,0,0 36.8101545253863 48.9102023608769 30.834 35.1368653421634 50.6294266441821 50.504 35.3311258278146 52.3570826306914 50.558 0 0 chimp,human,macaque,marmoset,orangutan,panda, antisense antisense A549@0.968309,AG04450@0.486703,BJ@0.356683,GM12878@0,H1HESC@0.450938,HELAS3@0.758441,HEPG2@0.838848,HMEC@0.407543,HSMM@0.202975,HUVEC@0.091524,K562@0,MCF7@1.22804,NHEK@0.460196,NHLF@1.35975,SKNSHRA@0.422765, 0 0 0 0 ENSG00000254109.1 ENST00000523643.1 chr8:30239640-30242256 3 751 1861 exonic 1.59 1 1,1,1 0 0,0,0 4.39414114513981 26.9129500268673 125.933 256.960053262317 27.143471252015 132.807 261.756324900133 30.2686727565825 131.115 1 1 chimp,human,macaque,marmoset,orangutan, antisense antisense A549@0.968309,AG04450@0.486703,BJ@0.356683,GM12878@0,H1HESC@0.450938,HELAS3@0.758441,HEPG2@0.838848,HMEC@0.407543,HSMM@0.202975,HUVEC@0.091524,K562@0,MCF7@1.22804,NHEK@0.460196,NHLF@1.35975,SKNSHRA@0.422765, 0 0 0 0 ENSG00000254109.1 ENST00000519753.1 chr8:30239640-30242809 4 1027 2136 exonic 5.01 1 1,1,1 1 0,0,0 9.29503407984421 54.314138576779 53.41 191.89970788705 56.2233146067416 58.604 195.154819863681 58.1418539325843 58.902 1 1 chimp,human,macaque,marmoset,orangutan, antisense antisense A549@0.968309,AG04450@0.486703,BJ@0.356683,GM12878@0,H1HESC@0.450938,HELAS3@0.758441,HEPG2@0.838848,HMEC@0.407543,HSMM@0.202975,HUVEC@0.091524,K562@0,MCF7@1.22804,NHEK@0.460196,NHLF@1.35975,SKNSHRA@0.422765, 0 0 0 0 ENSG00000253112.1 ENST00000522640.1 chr8:30454431-30455049 2 405 211 intronic -7.55 0 0,0,1 0 0,0,0 0 0 0 0 0 0 0 0 0 0 1 chimp,human,orangutan, antisense antisense A549@0,AG04450@0,BJ@0,GM12878@0.0195735,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0.052869, 0 0 0 0 ENSG00000104691.10 ENST00000522735.1 chr8:30589764-30620863 8 805 30280 intergenic 3.50 0 0,0,0 0 0,1,1 38.1975155279503 2.37556142668428 0 212.330434782609 4.7385072655218 0 194.380124223602 10.168428005284 0 0 0 chimp,dog,elephant,horse,human,macaque,marmoset,orangutan,panda,pig,rabbit, antisense antisense A549@3.93372,AG04450@2.02533,BJ@2.46383,GM12878@2.02889,H1HESC@1.22748,HELAS3@6.4662,HEPG2@3.5129,HMEC@1.59146,HSMM@3.16484,HUVEC@1.73432,K562@8.23113,MCF7@1.46883,NHEK@2.85828,NHLF@3.47585,SKNSHRA@2.54638, 0 0 0 0 ENSG00000104691.10 ENST00000522968.1 chr8:30590136-30609035 2 811 18086 intergenic 3.82 0 0,0,0 0 0,1,1 37.9149198520345 3.97721994913193 0 74.0887792848335 3.8749861771536 0 58.422934648582 4.8774742895057 0 0 0 human, antisense antisense A549@3.93372,AG04450@2.02533,BJ@2.46383,GM12878@2.02889,H1HESC@1.22748,HELAS3@6.4662,HEPG2@3.5129,HMEC@1.59146,HSMM@3.16484,HUVEC@1.73432,K562@8.23113,MCF7@1.46883,NHEK@2.85828,NHLF@3.47585,SKNSHRA@2.54638, 0 0 0 0 ENSG00000104691.10 ENST00000517341.1 chr8:30601682-30624522 8 1441 21385 intergenic 8.28 1 1,1,1 1 0,1,1 21.3386537126995 0.029646948795885 0 146.013879250521 4.14547580079495 6.314 134.957668285913 20.185644143091 6.251 0 0 chimp,cow,dog,horse,human,macaque,marmoset,orangutan,panda,pig,rabbit, antisense antisense A549@3.93372,AG04450@2.02533,BJ@2.46383,GM12878@2.02889,H1HESC@1.22748,HELAS3@6.4662,HEPG2@3.5129,HMEC@1.59146,HSMM@3.16484,HUVEC@1.73432,K562@8.23113,MCF7@1.46883,NHEK@2.85828,NHLF@3.47585,SKNSHRA@2.54638, 0 0 0 0 ENSG00000104691.10 ENST00000265616.5 chr8:30601690-30624522 9 1430 21386 intergenic 7.18 1 1,1,1 1 0,1,1 21.5027972027972 0.0296455625175348 0 146.287412587413 4.1642195829047 6.314 135.154545454545 20.2034508557 6.251 0 0 chimp,cow,dog,horse,human,macaque,marmoset,orangutan,panda,pig,rabbit, antisense retained_intron A549@3.93372,AG04450@2.02533,BJ@2.46383,GM12878@2.02889,H1HESC@1.22748,HELAS3@6.4662,HEPG2@3.5129,HMEC@1.59146,HSMM@3.16484,HUVEC@1.73432,K562@8.23113,MCF7@1.46883,NHEK@2.85828,NHLF@3.47585,SKNSHRA@2.54638, 0 0 0 0 ENSG00000104691.10 ENST00000341403.5 chr8:30601690-30624522 8 1308 21510 intergenic 7.18 1 1,1,1 1 0,1,1 23.5084097859327 0.0294746629474663 0 128.586391437309 6.07531380753138 6.314 116.159785932722 22.0401208740121 6.251 0 0 chimp,cow,dog,guinea_pig,horse,human,macaque,marmoset,orangutan,panda,pig, antisense retained_intron A549@3.93372,AG04450@2.02533,BJ@2.46383,GM12878@2.02889,H1HESC@1.22748,HELAS3@6.4662,HEPG2@3.5129,HMEC@1.59146,HSMM@3.16484,HUVEC@1.73432,K562@8.23113,MCF7@1.46883,NHEK@2.85828,NHLF@3.47585,SKNSHRA@2.54638, 0 0 0 0 ENSG00000104691.10 ENST00000380154.5 chr8:30601690-30624522 9 1319 21497 intergenic 7.18 1 1,1,1 1 0,1,1 0 1.47462436619063 0 113.043972706596 6.97934595524957 6.314 110.606520090978 22.3370237707587 6.251 0 0 cat,chimp,cow,dog,horse,human,macaque,marmoset,orangutan,panda,pig, antisense retained_intron A549@3.93372,AG04450@2.02533,BJ@2.46383,GM12878@2.02889,H1HESC@1.22748,HELAS3@6.4662,HEPG2@3.5129,HMEC@1.59146,HSMM@3.16484,HUVEC@1.73432,K562@8.23113,MCF7@1.46883,NHEK@2.85828,NHLF@3.47585,SKNSHRA@2.54638, 0 0 0 0 ENSG00000104691.10 ENST00000519246.1 chr8:30601691-30624522 8 1615 21202 intergenic 8.28 1 1,1,1 1 0,1,1 19.0396284829721 0.0299028393547778 0 134.447058823529 3.87529478351099 6.314 124.774613003096 20.0407980379209 6.251 0 0 chimp,cow,dog,horse,human,macaque,marmoset,orangutan,panda,pig, antisense antisense A549@3.93372,AG04450@2.02533,BJ@2.46383,GM12878@2.02889,H1HESC@1.22748,HELAS3@6.4662,HEPG2@3.5129,HMEC@1.59146,HSMM@3.16484,HUVEC@1.73432,K562@8.23113,MCF7@1.46883,NHEK@2.85828,NHLF@3.47585,SKNSHRA@2.54638, 0 0 0 0 ENSG00000104691.10 ENST00000523607.1 chr8:30601706-30624421 7 1194 21509 intergenic 8.28 1 1,1,1 1 0,1,1 25.7529313232831 0.0294760332883909 0 141.881072026801 6.05676693477149 6.314 128.257956448911 22.0225022083779 6.251 0 0 chimp,cow,dog,horse,human,macaque,marmoset,orangutan,panda,pig,rabbit, antisense antisense A549@3.93372,AG04450@2.02533,BJ@2.46383,GM12878@2.02889,H1HESC@1.22748,HELAS3@6.4662,HEPG2@3.5129,HMEC@1.59146,HSMM@3.16484,HUVEC@1.73432,K562@8.23113,MCF7@1.46883,NHEK@2.85828,NHLF@3.47585,SKNSHRA@2.54638, 0 0 0 0 ENSG00000104691.10 ENST00000518239.1 chr8:30601707-30623910 8 693 21496 intergenic -0.75 0 1,1,1 1 0,1,1 0 1.47469296613323 0 224.818181818182 6.64514328247116 6.314 214.467532467532 22.2186453293636 6.251 0 0 cat,chimp,cow,dog,elephant,horse,human,macaque,marmoset,mouse,orangutan,panda,pig,rabbit,rat, antisense antisense A549@3.93372,AG04450@2.02533,BJ@2.46383,GM12878@2.02889,H1HESC@1.22748,HELAS3@6.4662,HEPG2@3.5129,HMEC@1.59146,HSMM@3.16484,HUVEC@1.73432,K562@8.23113,MCF7@1.46883,NHEK@2.85828,NHLF@3.47585,SKNSHRA@2.54638, 0 0 0 0 ENSG00000104691.10 ENST00000518059.1 chr8:30608914-30620839 6 487 11428 intergenic -3.58 0 0,0,0 0 0,1,1 62.4887063655031 0 0.951 294.94250513347 7.92334616730836 1.113 263.404517453799 20.8148407420371 1.098 0 0 cat,chimp,cow,dog,elephant,guinea_pig,horse,human,macaque,marmoset,mouse,opossum,orangutan,panda,pig,rabbit,rat, antisense antisense A549@3.93372,AG04450@2.02533,BJ@2.46383,GM12878@2.02889,H1HESC@1.22748,HELAS3@6.4662,HEPG2@3.5129,HMEC@1.59146,HSMM@3.16484,HUVEC@1.73432,K562@8.23113,MCF7@1.46883,NHEK@2.85828,NHLF@3.47585,SKNSHRA@2.54638, 0 0 0 0 ENSG00000104691.10 ENST00000521598.1 chr8:30613636-30623816 5 473 9699 intergenic -3.58 0 0,0,1 0 0,1,1 0 0 0 145.752642706131 1.74265388184349 0 141.389006342495 21.9960820703165 0 0 0 cat,chimp,elephant,guinea_pig,human,macaque,marmoset,mouse,orangutan,pig,rabbit,rat, antisense antisense A549@3.93372,AG04450@2.02533,BJ@2.46383,GM12878@2.02889,H1HESC@1.22748,HELAS3@6.4662,HEPG2@3.5129,HMEC@1.59146,HSMM@3.16484,HUVEC@1.73432,K562@8.23113,MCF7@1.46883,NHEK@2.85828,NHLF@3.47585,SKNSHRA@2.54638, 0 0 0 0 ENSG00000104691.10 ENST00000520436.1 chr8:30620663-30624068 2 525 2878 intergenic 8.28 0 0,0,1 0 0,1,1 0 0 0 89.8914285714285 1.03196664350243 0 80.0209523809524 69.2682418346074 0 0 0 cat,chimp,cow,dog,elephant,horse,human,macaque,marmoset,orangutan,panda,rabbit, antisense retained_intron A549@3.93372,AG04450@2.02533,BJ@2.46383,GM12878@2.02889,H1HESC@1.22748,HELAS3@6.4662,HEPG2@3.5129,HMEC@1.59146,HSMM@3.16484,HUVEC@1.73432,K562@8.23113,MCF7@1.46883,NHEK@2.85828,NHLF@3.47585,SKNSHRA@2.54638, 0 0 0 0 ENSG00000253961.1 ENST00000521252.1 chr8:31024594-31034388 2 294 9498 exonic 0 0 0,0,0 0 0,0,0 21.1360544217687 1.08865024215624 0 52.4081632653061 1.79901031796168 0 65.2755102040816 3.1197094125079 0 0 0 cat,chimp,dog,human,macaque,marmoset,orangutan, antisense antisense A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000253961.1 ENST00000523365.1 chr8:31028639-31034683 4 639 5399 intronic -10.17 0 0,0,0 0 0,0,0 0 1.91516947582886 0 5.98435054773083 2.81070568623819 0 6.2848200312989 3.87368031116874 0 1 1 chimp,human,macaque,marmoset,orangutan, antisense antisense A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000253377.1 ENST00000524022.1 chr8:31133112-31241795 2 334 108347 intergenic -9.57 1 0,0,0 0 0,0,0 0 3.73626404053642 0 0 8.20773994665288 1.434 0 9.80248645555484 1.458 0 0 cow,guinea_pig,human,marmoset,pig, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000254095.1 ENST00000524017.1 chr8:31196713-31201945 4 820 4406 intergenic 4.31 0 0,0,0 0 0,0,0 0 3.82750794371312 0 0 4.82183386291421 5.019 0 5.63186563776668 5.439 1 1 chimp,human,macaque,marmoset,orangutan, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0.003796,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0.004157, 0 0 0 0 ENSG00000254095.1 ENST00000522611.1 chr8:31201188-31202149 2 645 314 intergenic 4.31 0 0,0,1 0 0,0,0 0 0 0 0 0 4.704 0 0 4.8 1 1 chimp,human,macaque,marmoset,orangutan, lincRNA retained_intron A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0.003796,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0.004157, 0 0 0 0 ENSG00000254095.1 ENST00000505166.2 chr8:31201211-31203995 2 309 2473 intergenic -1.48 0 0,0,1 0 0,0,0 0 23.1156490093004 0 0 42.4868580671249 0.588 0 42.8843509906996 0.6 0 0 chimp,horse,human,macaque,marmoset,orangutan, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0.003796,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0.004157, 0 0 0 0 ENSG00000253275.1 ENST00000520391.1 chr8:31354939-31356128 2 326 861 intergenic 0 0 0,0,0 0 0,0,0 0 0 0 0 0 13.281 0 0 19.884 0 0 NA lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0.0166785, 0 0 0 0 ENSG00000253974.1 ENST00000521463.1 chr8:31883735-31957281 4 738 72802 intronic 2.68 0 0,0,0 0 0,0,0 0 5.50303563088926 0 0 8.119804400978 4.59 0 10.0066619048927 4.828 0 0 chimp,cow,dog,horse,human,marmoset,orangutan,pig, sense_intronic sense_intronic A549@0.0070105,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0.166136, 0 0 0 0 ENSG00000253974.1 ENST00000520444.1 chr8:31883747-31920988 4 754 36481 intronic 1.05 0 0,0,0 0 0,0,0 0 6.43877634933253 0 2.85278514588859 8.09435048381349 4.59 2.90053050397878 9.41092623557468 4.828 0 0 chimp,guinea_pig,human,macaque,marmoset,orangutan,rabbit,rat, sense_intronic sense_intronic A549@0.0070105,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0.166136, 0 0 0 0 ENSG00000253974.1 ENST00000523743.1 chr8:31883843-31996793 4 288 112656 intronic -8.44 0 0,0,1 0 0,0,0 0 7.53460978554183 0 0 11.466490910382 4.59 0 13.6331930833688 4.828 0 0 chimp,dog,horse,human,macaque,marmoset,orangutan,pig, sense_intronic sense_intronic A549@0.0070105,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0.166136, 0 0 0 0 ENSG00000253974.1 ENST00000523785.1 chr8:31994177-31996991 2 350 2462 intronic -1.03 0 0,0,0 0 0,0,0 0 0 0 0 3.19821283509342 0 0 3.28919577579204 0 0 0 chimp,dog,elephant,human,macaque,marmoset,orangutan, sense_intronic sense_intronic A549@0.0070105,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0.166136, 0 0 0 0 ENSG00000253222.1 ENST00000517967.1 chr8:32028898-32145082 2 541 115641 intronic -4.14 0 0,0,0 0 0,0,0 0 7.19159294713813 0 0 9.17456611409449 0 0 11.0609126520871 0 0 0 cat,chimp,dog,elephant,horse,human,macaque,marmoset,orangutan, sense_intronic sense_intronic A549@0.043037,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0.04561,HUVEC@0,K562@0,MCF7@0,NHEK@0.00403633,NHLF@0,SKNSHRA@0.124705, 0 0 0 0 ENSG00000253222.1 ENST00000523320.1 chr8:32078444-32144963 2 551 65966 intronic -4.14 0 0,0,0 0 0,0,0 52.6079854809437 7.38378861837916 74.681 34.005444646098 8.65618652032866 141.48 38.3956442831216 10.1421641451657 152.239 0 0 cat,chimp,elephant,human,macaque,marmoset,orangutan,pig,rabbit, sense_intronic sense_intronic A549@0.043037,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0.04561,HUVEC@0,K562@0,MCF7@0,NHEK@0.00403633,NHLF@0,SKNSHRA@0.124705, 0 0 0 0 ENSG00000254049.1 ENST00000519023.1 chr8:32298262-32300241 3 502 1473 intronic 5.87 1 0,0,0 0 0,0,0 0 0 0 69.3426294820717 24.224711473184 2.232 89.1593625498008 40.3217922606925 7.732 0 0 chimp,cow,dog,guinea_pig,horse,human,macaque,marmoset,orangutan,panda, sense_intronic sense_intronic A549@0.0153545,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000247134.2 ENST00000520819.1 chr8:32853696-32902320 3 709 47911 intergenic -2.59 1 0,0,1 0 0,0,0 0 3.0387384942915 0 0 7.77282878670869 0 0 59.6372231846549 18.072 0 0 chimp,cow,dog,horse,human,macaque,marmoset,orangutan,pig, lincRNA processed_transcript A549@5.06101,AG04450@0.78835,BJ@0.146121,GM12878@5.12819,H1HESC@3.11897,HELAS3@1.87412,HEPG2@0.268974,HMEC@0.4453,HSMM@1.01822,HUVEC@0.077887,K562@0,MCF7@0,NHEK@0.467129,NHLF@0.215067,SKNSHRA@0.217125, 0 0 0 0 ENSG00000247134.2 ENST00000500843.2 chr8:32853696-32902373 3 734 47939 intergenic -2.59 1 0,0,1 0 0,0,0 0 3.03696364129414 0 0 7.76828886710194 0 0 59.6023905379753 18.072 0 0 cat,chimp,cow,dog,horse,human,macaque,marmoset,orangutan,panda,pig, lincRNA processed_transcript A549@5.06101,AG04450@0.78835,BJ@0.146121,GM12878@5.12819,H1HESC@3.11897,HELAS3@1.87412,HEPG2@0.268974,HMEC@0.4453,HSMM@1.01822,HUVEC@0.077887,K562@0,MCF7@0,NHEK@0.467129,NHLF@0.215067,SKNSHRA@0.217125, 0 0 0 0 ENSG00000253642.1 ENST00000523063.1 chr8:33462374-33896003 6 760 432859 intergenic -5.69 0 0,0,0 0 0,0,0 18.8684210526316 13.5189403477807 0 18.7960526315789 18.8395620744861 0 23.7789473684211 24.3051455554811 0 0 0 chimp,guinea_pig,horse,human,macaque,marmoset,mouse,orangutan, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0.0155195,H1HESC@0.007543,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0.0036785,K562@0.0982375,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000253642.1 ENST00000517292.1 chr8:33613295-33653954 2 270 40387 intergenic 0.08 0 0,0,1 0 0,0,0 53.1111111111111 15.3280511055538 0 49.5 19.2611731497759 0 64.2333333333333 21.359670190903 0 0 0 chimp,human,macaque,marmoset,rat, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0.0155195,H1HESC@0.007543,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0.0036785,K562@0.0982375,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000254194.1 ENST00000518163.1 chr8:33831219-33867110 3 408 35479 intergenic -0.21 0 0,0,0 0 0,0,0 33.7132352941176 14.4119620056935 0 51.8088235294118 25.8573804222216 17.231 51.9264705882353 29.5219989289439 18.568 0 0 chimp,dog,horse,human,macaque,marmoset,orangutan,panda,pig, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000254194.1 ENST00000521714.1 chr8:33831219-33867113 4 507 35381 intergenic -1.34 0 0,0,0 0 0,0,0 27.1301775147929 14.4518809530539 0 44.2189349112426 25.9290014414516 15.95 44.3372781065089 29.603770385235 17.275 0 0 chimp,cow,dog,human,macaque,marmoset,orangutan,panda,pig,rabbit, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000253642.1 ENST00000521541.1 chr8:33865374-33896441 2 659 30406 intergenic -4.38 0 0,0,0 0 0,0,0 0 23.3519700059199 7.48 1.39605462822458 22.6967374860225 0 1.1062215477997 23.2341643096757 0 1 1 chimp,human,macaque,marmoset,orangutan, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0.0155195,H1HESC@0.007543,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0.0036785,K562@0.0982375,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000253642.1 ENST00000523336.1 chr8:33865375-33896526 3 781 30366 intergenic -4.38 0 0,0,0 0 0,0,0 0 23.3827306856353 7.48 1.17797695262484 22.7266350523612 0 0.933418693982074 23.2647698083383 0 1 1 chimp,human,macaque,marmoset,orangutan, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0.0155195,H1HESC@0.007543,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0.0036785,K562@0.0982375,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 1 96 0 0 ENSG00000254302.1 ENST00000518217.1 chr8:34032404-34042413 2 535 9472 intergenic -5.14 0 0,0,0 0 0,0,0 0 2.55046452702703 40.434 0 3.81915118243243 147.726 0 5.5551097972973 166.649 0 0 cat,chimp,dog,human,macaque,orangutan,panda,pig,rabbit, lincRNA lincRNA A549@0.0062805,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0.0091475,MCF7@0,NHEK@0.00666967,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000253108.1 ENST00000522460.1 chr8:34085957-34204249 5 577 117707 intergenic 1.98 0 0,0,0 0 0,0,0 0 14.4187516460363 0 0 17.8647574061016 0 0 24.2497217667598 0 0 0 chimp,horse,human,macaque,marmoset,orangutan, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0.013801,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000254033.1 ENST00000518178.1 chr8:34086812-34106464 2 428 19222 intergenic 5.79 0 0,1,1 0 0,0,0 0 0 0 0 5.42243262927895 0 0 9.66111746956612 0 0 0 human,macaque,marmoset,orangutan,panda, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000254344.1 ENST00000519189.1 chr8:34641570-34722316 4 525 80215 intergenic -8.71 0 0,0,0 0 0,0,0 80.3657142857143 9.27447484884373 0 142.834285714286 17.6813563547965 34.917 141.645714285714 25.0798728417378 48.702 0 0 chimp,cow,dog,elephant,guinea_pig,horse,human,macaque,marmoset,mouse,orangutan,pig,rabbit,rat, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000253452.1 ENST00000524167.1 chr8:35719641-35788228 7 556 68019 intergenic -2.67 0 0,0,0 0 0,0,0 0 20.8057307517017 0 0 27.33387729899 0 12.1888489208633 28.7726223555183 2.673 1 1 chimp,human,macaque,marmoset,orangutan, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000253452.1 ENST00000523748.1 chr8:35720025-35828183 5 573 107577 intergenic -2.84 0 0,0,0 0 0,0,0 0 17.6274761333742 0 0 23.8846407689376 0 11.8272251308901 25.1079970625692 0 0 0 chimp,human,macaque,marmoset,orangutan,rabbit, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000253524.1 ENST00000518181.1 chr8:35861834-35952564 3 357 90369 intergenic -5.54 0 0,0,0 0 0,0,0 0 10.1804711792761 0 0 15.4426407285684 0 0 16.9339043255984 0 0 0 chimp,elephant,human,macaque,orangutan, lincRNA lincRNA A549@0.0060295,AG04450@0,BJ@0,GM12878@0.426124,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000253524.1 ENST00000523342.1 chr8:35861838-35951527 3 384 89301 intergenic -5.54 1 0,0,0 0 0,0,0 0 10.3022250590699 0 0 15.6273278014804 0 0 17.1364262438271 0 0 0 chimp,elephant,human,macaque,orangutan, lincRNA lincRNA A549@0.0060295,AG04450@0,BJ@0,GM12878@0.426124,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000253363.1 ENST00000524132.1 chr8:36394909-36636682 5 565 241200 intergenic 1.28 0 0,0,0 0 0,0,0 0 8.16997512437811 0 0 12.774092039801 0 0 15.3796144278607 0 1 1 chimp,human,macaque,marmoset,orangutan, processed_transcript processed_transcript A549@0,AG04450@0,BJ@0,GM12878@0.0496825,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0.0095565,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000253363.1 ENST00000519451.1 chr8:36622472-36636682 3 511 13695 intergenic -6.88 0 0,0,1 0 0,0,0 0 8.79649507119387 0 0 5.07951807228916 0 0 8.11113545089449 0 1 1 chimp,human,macaque,marmoset,orangutan, processed_transcript processed_transcript A549@0,AG04450@0,BJ@0,GM12878@0.0496825,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0.0095565,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000253123.1 ENST00000523946.1 chr8:37184093-37188355 2 3690 570 intergenic 7.23 0 0,0,0 0 0,0,0 49.7845528455285 65.2631578947368 190.092 78.8365853658537 108.631578947368 234.811 83.7010840108401 117.498245614035 277.581 1 1 chimp,human,macaque,marmoset,orangutan, lincRNA TEC A549@0.0034765,AG04450@0.003303,BJ@0,GM12878@0,H1HESC@0.008336,HELAS3@0.004502,HEPG2@0.004433,HMEC@0,HSMM@0.0056935,HUVEC@0,K562@0.0007385,MCF7@0.13287,NHEK@0.000691667,NHLF@0.001045,SKNSHRA@0, 0 0 0 0 ENSG00000253123.1 ENST00000518765.1 chr8:37188190-37189502 2 711 599 intergenic 1.64 0 0,1,0 0 0,0,0 127.929676511955 164.646076794658 0 159.241912798875 205.823038397329 0 199.603375527426 229.398998330551 0 0 0 cat,chimp,cow,horse,human,macaque,mouse,orangutan, lincRNA lincRNA A549@0.0034765,AG04450@0.003303,BJ@0,GM12878@0,H1HESC@0.008336,HELAS3@0.004502,HEPG2@0.004433,HMEC@0,HSMM@0.0056935,HUVEC@0,K562@0.0007385,MCF7@0.13287,NHEK@0.000691667,NHLF@0.001045,SKNSHRA@0, 0 0 0 0 ENSG00000253746.1 ENST00000520431.1 chr8:37262957-37264242 2 576 707 intergenic -3.33 0 0,0,0 0 0,0,0 0 0 0 0 0 0 0 0 0 0 0 cat,chimp,dog,human,macaque,marmoset,orangutan,rabbit, lincRNA lincRNA A549@0,AG04450@1.1096,BJ@0.0600995,GM12878@0.0081105,H1HESC@0.020566,HELAS3@0,HEPG2@0,HMEC@0.014168,HSMM@0.917801,HUVEC@0,K562@0,MCF7@0.014229,NHEK@5.02312,NHLF@0.255958,SKNSHRA@0.115364, 0 0 0 0 ENSG00000253388.1 ENST00000517897.1 chr8:37337607-37338327 2 167 551 intronic -2.41 0 0,0,0 0 0,0,0 0 0 160.498 0 15.8166969147005 179.01 0 15.9255898366606 175.939 1 1 chimp,human,macaque,marmoset,orangutan, antisense antisense A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000254306.1 ENST00000517714.1 chr8:37458055-37483391 5 546 24782 intergenic -2.82 0 0,0,0 0 0,0,0 41.3205128205128 12.9018642563151 0 7.68681318681319 22.9453635703333 0 8.09340659340659 26.2061576951013 0 0 0 chimp,dog,elephant,human,marmoset,orangutan, lincRNA lincRNA A549@0,AG04450@0,BJ@0.004468,GM12878@0,H1HESC@0,HELAS3@0.015151,HEPG2@0.0117645,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0.082784,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000253344.1 ENST00000519978.1 chr8:37483533-37531905 2 834 47536 intergenic 4.12 0 0,0,0 0 0,0,0 0 22.6438699091215 52.724 0 22.2518301918546 48.447 0 24.4535509929317 54.198 0 0 chimp,dog,guinea_pig,human,macaque,marmoset,orangutan,pig, antisense antisense A549@0.006608,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0.0499295,HEPG2@0.0140185,HMEC@0,HSMM@0,HUVEC@0,K562@0.0058755,MCF7@0.0048645,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000253181.1 ENST00000523507.1 chr8:37575097-37591274 3 1225 14948 intergenic 0.50 1 0,0,1 0 0,0,0 10.2587755102041 30.1140620818839 184.765 3.09142857142857 33.7613727588975 292.993 19.9208163265306 34.2937516724645 286.137 0 0 chimp,elephant,human,macaque, antisense antisense A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0.005023,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000240015.2 ENST00000476186.2 chr8:37980792-37982169 2 619 756 intronic -11.58 0 0,0,0 0 0,0,0 0 0 0 0 0 0 0 0 0 0 1 chimp,human,macaque,orangutan, antisense antisense A549@0.105423,AG04450@0.016233,BJ@0.036766,GM12878@0.140783,H1HESC@0.250074,HELAS3@0.130295,HEPG2@0.357989,HMEC@0.00683,HSMM@0.0061215,HUVEC@0.347191,K562@0.469702,MCF7@0.454236,NHEK@0.0316213,NHLF@0.0028975,SKNSHRA@0.0681485, 0 0 0 0 ENSG00000253356.1 ENST00000520598.1 chr8:38006259-38021290 2 560 14469 exonic 0.95 0 0,1,1 0 0,0,0 119.0875 0.660722924873868 38.253 111.625 4.5844909807174 90.324 146.910714285714 5.67862326352892 93.342 0 0 cat,chimp,cow,dog,elephant,guinea_pig,horse,human,macaque,marmoset,mouse,opossum,orangutan,panda,platypus,rabbit,rat, antisense antisense A549@0.0154495,AG04450@0.008381,BJ@0.0087615,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0.012872,MCF7@0,NHEK@0.0151343,NHLF@0,SKNSHRA@0.0242505, 0 0 0 0 ENSG00000255487.1 ENST00000529325.1 chr8:38133406-38134198 2 254 536 exonic 0.50 0 0,0,1 0 0,0,0 76.7244094488189 147.164179104478 500.259 51.6456692913386 163.973880597015 117.98 77.3188976377953 197.494402985075 136.656 0 0 cat,chimp,cow,elephant,guinea_pig,horse,human,macaque,marmoset,orangutan,pig, antisense antisense A549@0.0362265,AG04450@0.0805745,BJ@0.173378,GM12878@0.228496,H1HESC@0,HELAS3@0.0525205,HEPG2@0.143072,HMEC@0,HSMM@0.0643,HUVEC@0.1504,K562@0.259642,MCF7@0.03177,NHEK@0.076087,NHLF@0.015159,SKNSHRA@0.17933, 0 0 0 0 ENSG00000254898.1 ENST00000527912.1 chr8:38193499-38195069 2 432 1136 exonic 1.56 1 0,0,0 0 0,0,0 189.537037037037 9.31338028169014 0 223.62962962963 12.7755281690141 11.978 192.717592592593 13.6258802816901 23.58 0 0 cat,chimp,dog,elephant,horse,human,macaque,marmoset,mouse,orangutan,panda,pig,rat, antisense antisense A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0.0107,MCF7@0,NHEK@0,NHLF@0.0089915,SKNSHRA@0.0285155, 0 0 0 0 ENSG00000254981.1 ENST00000533301.1 chr8:38258054-38259201 2 375 770 intronic -12.56 0 0,0,0 0 0,0,0 0 142.515584415584 53.958 15.408 109.337662337662 40.632 18.3866666666667 152.527272727273 58.986 0 0 cat,chimp,cow,elephant,guinea_pig,horse,human,macaque,marmoset,mouse,orangutan,panda,pig,rabbit,rat, antisense antisense A549@0.126237,AG04450@0.129891,BJ@0.082415,GM12878@0,H1HESC@0,HELAS3@0.178136,HEPG2@0.0340815,HMEC@0,HSMM@0.005458,HUVEC@0.020793,K562@0,MCF7@0.0054535,NHEK@0,NHLF@0.0516405,SKNSHRA@0.0740455, 0 0 0 0 ENSG00000255201.1 ENST00000528407.1 chr8:38279407-38283614 2 532 3673 exonic 2.45 0 0,1,0 0 0,0,0 143.87969924812 69.9659678736727 72.22 285.462406015038 88.7998910971958 126.524 276.287593984962 91.888102368636 130.493 0 0 cat,chimp,cow,dog,elephant,guinea_pig,horse,human,macaque,marmoset,mouse,opossum,orangutan,panda,pig,platypus,rabbit,rat, antisense antisense A549@0.005813,AG04450@0.0110875,BJ@0,GM12878@0,H1HESC@0,HELAS3@0.00497,HEPG2@0.00399,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0.0084975, 0 0 0 0 ENSG00000253361.1 ENST00000521623.1 chr8:38401170-38410198 3 376 8648 intergenic 0.06 1 0,0,1 0 0,0,0 0 3.00531914893617 63.375 0 2.05666049953747 101.48 0 2.49826549491212 100.098 0 1 chimp,human,macaque,orangutan, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0.006529,HELAS3@0.007105,HEPG2@0.067417,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000254100.1 ENST00000519764.1 chr8:38409766-38416538 5 532 6232 intergenic 0.73 0 0,0,1 0 0,0,0 111.501879699248 26.2726251604621 75.358 72.8740601503759 49.1933568677792 68.378 76.2443609022556 50.6603016688062 71.927 0 0 cat,chimp,dog,elephant,guinea_pig,human,marmoset,orangutan,panda,rabbit, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0.003863,HELAS3@0.0105315,HEPG2@0.0083015,HMEC@0.007625,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000254321.1 ENST00000521511.1 chr8:38558144-38562373 4 731 3492 intergenic -0.71 0 0,1,1 0 0,0,0 77.4623803009576 8.46076746849943 0 17.4295485636115 21.3465063001145 19.169 21.124487004104 21.5489690721649 16.402 0 0 chimp,dog,human,macaque,marmoset,orangutan,pig, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000253586.1 ENST00000518535.1 chr8:38657161-38659814 2 354 2297 intronic -7.10 0 0,1,0 0 0,0,0 37.6497175141243 0 10.416 56.2485875706215 1.04048759251197 1.785 58.3050847457627 1.05790161079669 1.855 0 0 cat,chimp,elephant,horse,human,marmoset,mouse,orangutan,panda,rat, sense_intronic sense_intronic A549@0.0125805,AG04450@0.0289,BJ@0,GM12878@0.085463,H1HESC@0,HELAS3@0.011213,HEPG2@0.0167745,HMEC@0,HSMM@0,HUVEC@0.231,K562@0.060736,MCF7@0.0148795,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000253829.1 ENST00000459965.2 chr8:38702384-38703957 2 385 1186 intronic -6.73 0 0,1,0 0 0,0,0 0 0 49.868 0 0 76.954 0 0 70.527 0 0 human, antisense antisense A549@0,AG04450@0,BJ@0.0063615,GM12878@0,H1HESC@0.0053605,HELAS3@0.0137155,HEPG2@0.018698,HMEC@0.072206,HSMM@0.009843,HUVEC@0.0383175,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000253645.1 ENST00000520863.1 chr8:38827879-38830530 2 648 2001 exonic 0.21 0 0,0,1 0 0,0,0 0 0 40.344 5.90277777777778 1.23938030984508 68.276 6.13425925925926 2.63018490754623 68.566 0 0 chimp,cow,dog,elephant,horse,human,macaque,marmoset,orangutan,panda,pig, antisense antisense A549@0,AG04450@0,BJ@0,GM12878@0.0117115,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0.006993, 0 0 0 0 ENSG00000254067.1 ENST00000518465.1 chr8:39413665-39416052 3 677 1706 intergenic -5.01 0 0,0,0 0 0,0,0 0 0 0 11.9586410635155 5.43962485345838 0 12.2954209748892 5.57033997655334 0 0 0 cat,chimp,cow,dog,elephant,guinea_pig,horse,human,macaque,marmoset,mouse,orangutan,panda,pig,rat, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0.151704,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@1.38326,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000254082.1 ENST00000519537.1 chr8:39424224-39437653 4 502 12921 intergenic -3.13 1 0,0,1 0 0,0,0 0 0 0 17.4382470119522 0.234115006578438 0 15.4980079681275 0.243789180403993 0 0 0 cat,chimp,cow,dog,elephant,guinea_pig,horse,human,macaque,marmoset,mouse,orangutan,panda,pig,rabbit, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0.053794,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0.197739,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000254082.1 ENST00000523523.1 chr8:39433113-39437653 3 270 4266 intergenic -0.30 1 0,0,1 0 0,0,0 0 0 0 5.84444444444444 0 3.224 6.04444444444444 0 3.367 0 0 chimp,cow,horse,human,orangutan, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0.053794,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0.197739,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000253939.1 ENST00000517623.1 chr8:39761294-39852767 3 499 90970 intronic 1.58 0 0,0,0 0 0,0,0 0 1.32405188523689 0 0 4.23112014949984 0 0 7.53187864131032 0 0 0 NA antisense antisense A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000253838.1 ENST00000520185.1 chr8:39771748-39773240 2 100 1390 intronic -4.74 1 0,0,0 0 0,0,0 0 0 0 0 0 23.373 0 0 24.311 0 0 chimp,cow,horse,human,macaque,marmoset,rabbit, sense_intronic sense_intronic A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0.0301095,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000254287.1 ENST00000522970.1 chr8:39775595-39778409 2 603 2209 exonic -3.50 0 0,0,0 0 0,0,0 0 0 0 21.3117744610282 24.3965595291987 1.673 36.6019900497513 26.3956541421458 1.757 0 0 chimp,guinea_pig,human,macaque,marmoset,orangutan,pig, antisense antisense A549@0,AG04450@0,BJ@0.0236555,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000253381.1 ENST00000524098.1 chr8:39961688-39965454 2 185 3579 intergenic 0 0 0,0,0 0 0,0,0 0 7.7116512992456 0 0 5.20564403464655 0 0 10.5976529756915 0 1 1 chimp,human,macaque,marmoset,orangutan, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000253665.1 ENST00000521257.1 chr8:39972170-39984987 3 736 12077 intergenic -4.14 0 0,0,0 0 0,0,0 0 1.17115177610334 0 0 7.47685683530678 10.13 0 9.61803428003643 16.488 0 1 human,marmoset,orangutan, lincRNA lincRNA A549@0.136209,AG04450@0,BJ@0.0032745,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0.007929,HMEC@0,HSMM@0,HUVEC@0.014188,K562@0,MCF7@0,NHEK@0,NHLF@0.005222,SKNSHRA@0, 0 0 0 0 ENSG00000254143.1 ENST00000520487.1 chr8:40018977-40030131 4 527 10621 intergenic 1.75 0 0,0,1 0 0,0,0 0 13.3405517371246 0 0 20.1945202899915 0 0 20.6974861124188 0 0 0 cat,chimp,horse,human,macaque,marmoset,orangutan,panda, lincRNA lincRNA A549@0.415112,AG04450@0,BJ@0.0777535,GM12878@0,H1HESC@0,HELAS3@1.18435,HEPG2@0.197102,HMEC@0,HSMM@0,HUVEC@0.0560455,K562@0,MCF7@0.0268465,NHEK@0,NHLF@0,SKNSHRA@0.020947, 0 0 0 0 ENSG00000253802.1 ENST00000521363.1 chr8:40156260-40168780 3 878 11638 intergenic -1.00 0 0,0,0 0 0,0,0 0 11.1543220484619 0 25.8633257403189 23.0927994500773 0 33.9476082004556 23.6823337343186 0 0 0 cat,chimp,cow,dog,elephant,guinea_pig,horse,human,macaque,marmoset,orangutan,panda, lincRNA lincRNA A549@1.11984,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0.0404825,HEPG2@0,HMEC@0,HSMM@0.006207,HUVEC@0,K562@0,MCF7@0.0242595,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000253802.1 ENST00000522486.1 chr8:40156594-40200921 2 503 43822 intergenic -1.00 0 0,1,0 0 0,0,0 0 5.44797133859705 0 0 12.20512527954 0 0 12.8589977636803 0 0 0 cat,chimp,cow,elephant,guinea_pig,horse,human,macaque,marmoset,orangutan,panda, lincRNA lincRNA A549@1.11984,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0.0404825,HEPG2@0,HMEC@0,HSMM@0.006207,HUVEC@0,K562@0,MCF7@0.0242595,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000253802.1 ENST00000521030.1 chr8:40190692-40200882 3 660 9526 intergenic -0.10 0 1,1,1 0 0,0,0 0 0 0 0 4.74994751207222 0 0 6.61662817551963 0 0 0 chimp,horse,human,macaque,marmoset,orangutan, lincRNA lincRNA A549@1.11984,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0.0404825,HEPG2@0,HMEC@0,HSMM@0.006207,HUVEC@0,K562@0,MCF7@0.0242595,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000253354.1 ENST00000518722.1 chr8:40227547-40259367 4 469 31345 intergenic 4.56 0 0,0,0 0 0,0,0 0 6.22542670282342 0 0 11.2274046897432 0 0 12.1501036847982 0 1 1 chimp,human,macaque,marmoset,orangutan, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000254383.1 ENST00000518428.1 chr8:40757535-40759373 2 492 1344 intergenic -25.55 0 0,1,1 0 0,0,0 71.9918699186992 121.690476190476 0 154.432926829268 80.9739583333333 34.727 142.880081300813 116.456845238095 29.597 0 0 cat,chimp,dog,elephant,guinea_pig,horse,human,macaque,marmoset,orangutan,panda, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000253174.1 ENST00000524133.1 chr8:41397900-41402563 2 568 4093 exonic 3.27 0 0,1,0 0 0,0,0 0 8.99144881505008 0 4.04049295774648 17.9704373320303 0 19.556338028169 25.900806254581 1.944 0 0 chimp,cow,dog,horse,human,macaque,mouse,orangutan,panda, antisense antisense A549@0.004753,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0.0068875,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000253408.1 ENST00000523459.1 chr8:42091193-42128429 3 587 36645 intergenic 3.68 0 0,0,1 0 0,0,0 0 1.61803793150498 0 0 1.99399645244917 29.768 0 13.178387228817 33.321 0 1 chimp,human,marmoset,orangutan, antisense antisense A549@0.0174685,AG04450@0.018521,BJ@0.003021,GM12878@0.06957,H1HESC@0.031264,HELAS3@0.04559,HEPG2@0.0361385,HMEC@0.291618,HSMM@0.0128355,HUVEC@0.0112165,K562@0.0030135,MCF7@0.0049335,NHEK@0.217011,NHLF@0.003307,SKNSHRA@0.041301, 0 0 0 0 ENSG00000253408.1 ENST00000521470.1 chr8:42106570-42120924 2 386 13966 intergenic -8.68 0 0,0,1 0 0,0,0 0 0 0 0 0 0 0 28.5837032793928 0 0 0 NA antisense antisense A549@0.0174685,AG04450@0.018521,BJ@0.003021,GM12878@0.06957,H1HESC@0.031264,HELAS3@0.04559,HEPG2@0.0361385,HMEC@0.291618,HSMM@0.0128355,HUVEC@0.0112165,K562@0.0030135,MCF7@0.0049335,NHEK@0.217011,NHLF@0.003307,SKNSHRA@0.041301, 0 0 0 0 ENSG00000253408.1 ENST00000521802.1 chr8:42112846-42123216 3 412 9954 intergenic -0.42 1 1,1,1 0 0,0,0 0 0.785613823588507 0 0 0.631303998392606 8.816 202.087378640777 0.640044203335343 9.124 0 1 chimp,human,orangutan, antisense antisense A549@0.0174685,AG04450@0.018521,BJ@0.003021,GM12878@0.06957,H1HESC@0.031264,HELAS3@0.04559,HEPG2@0.0361385,HMEC@0.291618,HSMM@0.0128355,HUVEC@0.0112165,K562@0.0030135,MCF7@0.0049335,NHEK@0.217011,NHLF@0.003307,SKNSHRA@0.041301, 0 0 0 0 ENSG00000253408.1 ENST00000520890.1 chr8:42112846-42127906 3 365 14691 intergenic -0.42 1 0,0,1 0 0,0,0 0 1.54693349669866 0 0 1.56960043564087 25.722 228.109589041096 1.92308215914505 28.771 0 0 NA antisense antisense A549@0.0174685,AG04450@0.018521,BJ@0.003021,GM12878@0.06957,H1HESC@0.031264,HELAS3@0.04559,HEPG2@0.0361385,HMEC@0.291618,HSMM@0.0128355,HUVEC@0.0112165,K562@0.0030135,MCF7@0.0049335,NHEK@0.217011,NHLF@0.003307,SKNSHRA@0.041301, 0 0 0 0 ENSG00000253408.1 ENST00000518994.1 chr8:42112846-42128438 3 598 14990 intergenic -0.42 1 0,0,1 0 0,0,0 0 1.51607738492328 0 0 1.53829219479653 29.768 139.230769230769 1.88472314876584 33.321 0 1 chimp,human,macaque,orangutan, antisense antisense A549@0.0174685,AG04450@0.018521,BJ@0.003021,GM12878@0.06957,H1HESC@0.031264,HELAS3@0.04559,HEPG2@0.0361385,HMEC@0.291618,HSMM@0.0128355,HUVEC@0.0112165,K562@0.0030135,MCF7@0.0049335,NHEK@0.217011,NHLF@0.003307,SKNSHRA@0.041301, 0 0 0 0 ENSG00000253408.1 ENST00000518213.1 chr8:42123647-42128715 2 813 4253 intergenic -3.56 0 0,1,0 0 0,0,0 0 3.5048201269692 50.274 12.0861008610086 1.8713849047731 84.46 13.1143911439114 2.99952974371032 80.119 0 0 cat,chimp,cow,horse,human,macaque,marmoset, antisense antisense A549@0.0174685,AG04450@0.018521,BJ@0.003021,GM12878@0.06957,H1HESC@0.031264,HELAS3@0.04559,HEPG2@0.0361385,HMEC@0.291618,HSMM@0.0128355,HUVEC@0.0112165,K562@0.0030135,MCF7@0.0049335,NHEK@0.217011,NHLF@0.003307,SKNSHRA@0.041301, 0 0 0 0 ENSG00000254165.1 ENST00000522190.1 chr8:42392672-42393447 2 706 67 intronic -2.70 1 0,0,0 0 0,0,0 0 0 0 0 0 0 0 0 1.757 0 0 chimp,cow,dog,elephant,human,macaque,marmoset,orangutan,panda,rabbit, antisense antisense A549@0.317056,AG04450@0.185392,BJ@0.125581,GM12878@0.448533,H1HESC@0.220975,HELAS3@0.613786,HEPG2@0.242409,HMEC@0.407246,HSMM@0.054293,HUVEC@0.090898,K562@0.821019,MCF7@0.239807,NHEK@0.160144,NHLF@0.0901205,SKNSHRA@0.233878, 0 0 0 0 ENSG00000255101.1 ENST00000527318.1 chr8:42560726-42577089 3 679 15680 intronic 0.12 0 0,0,0 0 0,0,0 0 5.5311862244898 0 0 6.77436224489796 0 0 8.66747448979592 0 1 1 chimp,human,macaque,marmoset,orangutan, antisense antisense A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0.162422,HELAS3@0,HEPG2@0.0243445,HMEC@0,HSMM@0,HUVEC@0.034313,K562@0,MCF7@0,NHEK@0,NHLF@0.0113805,SKNSHRA@0.0040775, 0 0 0 0 ENSG00000253745.1 ENST00000524012.1 chr8:47834183-47840454 2 603 5666 intergenic 4.98 0 0,0,0 0 0,0,0 0 0 0 0 0 0 0 0 0 0 1 chimp,human,macaque,orangutan, antisense antisense A549@0,AG04450@0,BJ@0,GM12878@0.0087785,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000253140.1 ENST00000521359.1 chr8:49428412-49429649 2 535 700 intergenic 2.09 0 0,0,1 0 0,0,0 0 0 0 0 6.82857142857143 14.717 0 5.99285714285714 9.984 0 0 cat,chimp,elephant,horse,human,macaque,marmoset,orangutan, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0.957164,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0.054884,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000253608.1 ENST00000522575.1 chr8:49464127-49611069 4 2368 144568 intergenic 5.34 0 0,0,0 0 0,0,0 0 8.10253998118533 44.484 0 11.0259185988601 13.956 0.589527027027027 16.4061548890488 23.802 0 0 chimp,horse,human,macaque,marmoset,orangutan, antisense antisense A549@0,AG04450@0.002492,BJ@0.0044015,GM12878@0,H1HESC@0.0019175,HELAS3@0,HEPG2@0,HMEC@0.005179,HSMM@0.009027,HUVEC@0,K562@0,MCF7@0.000916,NHEK@0.00704733,NHLF@0.0083735,SKNSHRA@0.002041, 0 0 0 0 ENSG00000253688.1 ENST00000524011.1 chr8:49464575-49469001 2 762 3662 intergenic -2.88 0 0,1,0 0 0,0,0 78.7191601049869 28.2067176406335 88.824 148.477690288714 53.0204806116876 61.521 185.677165354331 65.3309666848717 107.939 1 1 chimp,human,macaque,marmoset,orangutan, lincRNA lincRNA A549@0,AG04450@0.0799785,BJ@0.02556,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0.0176115,HUVEC@0.0332505,K562@0,MCF7@0,NHEK@0.0172417,NHLF@0.1876,SKNSHRA@0.071345, 0 0 0 0 ENSG00000233858.3 ENST00000430626.1 chr8:49502961-49507181 2 3547 671 intergenic 9.12 0 0,0,0 0 0,0,0 0 0 0 0 2.849478390462 31.517 3.16295460952918 13.548435171386 21.358 0 0 chimp,horse,human,macaque,orangutan, antisense antisense A549@0.009848,AG04450@0.024749,BJ@0.0494235,GM12878@0,H1HESC@0,HELAS3@0.002991,HEPG2@0.002306,HMEC@0.073488,HSMM@0.0218735,HUVEC@0.0076105,K562@0.0007545,MCF7@0,NHEK@0.00680567,NHLF@0.0236975,SKNSHRA@0.042953, 0 0 0 0 ENSG00000233858.3 ENST00000536671.1 chr8:49502961-49700220 4 3631 193622 encompassing 9.12 0 0,0,0 0 0,0,0 0 6.23313466444929 0 1.65271275130818 8.91240148330252 31.517 5.00936381162214 12.7919451302022 21.358 0 0 chimp,horse,human,macaque,orangutan, antisense antisense A549@0.009848,AG04450@0.024749,BJ@0.0494235,GM12878@0,H1HESC@0,HELAS3@0.002991,HEPG2@0.002306,HMEC@0.073488,HSMM@0.0218735,HUVEC@0.0076105,K562@0.0007545,MCF7@0,NHEK@0.00680567,NHLF@0.0236975,SKNSHRA@0.042953, 0 0 0 0 ENSG00000253702.1 ENST00000523038.1 chr8:49510018-49533578 4 555 22999 intergenic -0.10 0 0,0,0 0 0,0,0 0 1.60328709943911 10.81 7.64864864864865 5.19383451454411 17.021 15.8954954954955 8.44284534110179 40.685 1 1 chimp,human,macaque,marmoset,orangutan, lincRNA lincRNA A549@0,AG04450@0,BJ@0.0459135,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0.007325,HSMM@0.351236,HUVEC@0,K562@0,MCF7@0.054915,NHEK@0,NHLF@0.048828,SKNSHRA@0.0395615, 0 0 0 0 ENSG00000253455.1 ENST00000521660.1 chr8:49533025-49536455 2 287 3141 intergenic 1.55 0 0,0,0 0 0,0,0 0 3.44157911493155 0 0 6.86055396370583 0 0 15.9114931550462 0 0 0 cat,chimp,dog,horse,human,macaque,marmoset,orangutan,panda, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0.0167915,HUVEC@0,K562@0,MCF7@0.013823,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000253892.1 ENST00000518620.1 chr8:49569820-49571454 2 592 1040 intergenic -8.22 0 0,0,0 0 0,0,0 0 0 0 2.01858108108108 0 52.889 2.05236486486486 0 47.247 0 0 cat,chimp,dog,guinea_pig,horse,human,macaque,marmoset,opossum,orangutan,panda,rabbit, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0.047071,K562@0,MCF7@0,NHEK@0.0207613,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000253474.1 ENST00000518222.1 chr8:50081098-50141484 4 829 59551 intergenic -2.29 0 0,1,0 0 0,0,0 0 0 0 0 0 0 0 0.0547933703884066 0 0 0 NA lincRNA lincRNA A549@0.003316,AG04450@0,BJ@0,GM12878@0.130164,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0.0885355,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000253474.1 ENST00000519828.1 chr8:50081241-50137588 3 303 56040 intergenic 0 0 0,0,0 0 0,0,0 0 0 0 0 0 0 0 0.058226266952177 0 0 1 chimp,human,macaque,orangutan, lincRNA lincRNA A549@0.003316,AG04450@0,BJ@0,GM12878@0.130164,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0.0885355,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000253380.1 ENST00000518854.1 chr8:50409322-50424739 2 265 15150 intergenic -1.53 1 0,1,0 0 0,0,0 0 0 0 0 0 0 0 2.66983498349835 0 1 1 chimp,human,macaque,marmoset,orangutan, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000253484.1 ENST00000522408.1 chr8:50730146-50733504 3 409 2945 intergenic -9.78 0 0,0,0 0 0,0,0 0 0 0 0 1.29881154499151 0 2.29828850855746 1.34974533106961 0 1 1 chimp,human,macaque,marmoset,orangutan, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0.0128835,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0.029395,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000253849.1 ENST00000523907.1 chr8:51293575-51294835 2 432 826 intronic -3.63 0 0,0,0 0 0,0,0 0 0 0 0 0 5.786 0 0 0 1 1 chimp,human,macaque,marmoset,orangutan, sense_intronic sense_intronic A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0.0097825,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000253664.1 ENST00000521294.1 chr8:52170248-52233678 2 517 62911 exonic -4.13 0 0,0,0 0 0,0,0 0 0 0 0 1.14684236461032 0 45.6499032882012 1.76463575527332 0 0 0 cat,chimp,cow,dog,guinea_pig,horse,human,macaque,marmoset,opossum,orangutan,panda,rabbit, antisense antisense A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000253475.1 ENST00000518507.1 chr8:52808517-52808934 2 281 134 intronic -14.37 0 0,0,0 0 0,0,0 0 0 0 0 0 4.464 0 0 10.155 1 1 chimp,human,macaque,marmoset,orangutan, sense_intronic sense_intronic A549@0.0202305,AG04450@0.0464905,BJ@0.0373295,GM12878@0.011985,H1HESC@0.0180165,HELAS3@0.0187055,HEPG2@0.042934,HMEC@0,HSMM@0,HUVEC@0.081457,K562@0.0619645,MCF7@0,NHEK@0.00633567,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000228801.4 ENST00000518942.1 chr8:52811885-52859165 3 813 46463 intergenic 3.02 0 0,1,0 1 0,1,0 0 1.24654025783957 0 0 1.32404278673353 7.149 0 2.06136065256225 8.652 1 1 chimp,human,macaque,marmoset,orangutan, antisense antisense A549@0.799404,AG04450@0.888671,BJ@0.938808,GM12878@1.65561,H1HESC@1.9239,HELAS3@1.82047,HEPG2@2.02692,HMEC@0.814074,HSMM@0.603731,HUVEC@0.775545,K562@1.01047,MCF7@2.05588,NHEK@0.829122,NHLF@0.630862,SKNSHRA@3.06876, 0 0 0 0 ENSG00000228801.4 ENST00000423716.1 chr8:52812209-52859733 2 934 46588 intergenic 1.96 0 0,1,0 0 0,1,0 0 1.24319567270542 0 0 1.32049025500129 7.149 0 2.05582982742337 8.652 0 0 chimp,human,macaque,marmoset,orangutan,panda, antisense antisense A549@0.799404,AG04450@0.888671,BJ@0.938808,GM12878@1.65561,H1HESC@1.9239,HELAS3@1.82047,HEPG2@2.02692,HMEC@0.814074,HSMM@0.603731,HUVEC@0.775545,K562@1.01047,MCF7@2.05588,NHEK@0.829122,NHLF@0.630862,SKNSHRA@3.06876, 0 0 0 0 ENSG00000228801.4 ENST00000535440.1 chr8:52812209-52859733 3 932 46588 intergenic 1.96 0 0,1,0 0 0,1,0 0 1.24319567270542 0 0 1.32049025500129 7.149 0 2.05582982742337 8.652 0 0 chimp,human,macaque,marmoset,orangutan,panda, antisense antisense A549@0.799404,AG04450@0.888671,BJ@0.938808,GM12878@1.65561,H1HESC@1.9239,HELAS3@1.82047,HEPG2@2.02692,HMEC@0.814074,HSMM@0.603731,HUVEC@0.775545,K562@1.01047,MCF7@2.05588,NHEK@0.829122,NHLF@0.630862,SKNSHRA@3.06876, 0 0 0 0 ENSG00000228801.4 ENST00000520357.1 chr8:52812275-52825698 2 573 12848 intergenic -5.70 0 0,1,0 0 0,1,0 0 0 0 0 0.976727895392279 7.149 0 1.54786737235367 8.652 1 1 chimp,human,macaque,marmoset,orangutan, antisense antisense A549@0.799404,AG04450@0.888671,BJ@0.938808,GM12878@1.65561,H1HESC@1.9239,HELAS3@1.82047,HEPG2@2.02692,HMEC@0.814074,HSMM@0.603731,HUVEC@0.775545,K562@1.01047,MCF7@2.05588,NHEK@0.829122,NHLF@0.630862,SKNSHRA@3.06876, 0 0 0 0 ENSG00000228801.4 ENST00000521612.1 chr8:52812294-52824289 2 421 11572 intergenic -3.89 0 1,1,1 0 0,1,0 0 0 0 0 1.08442792948496 7.149 0 1.71854476322157 8.652 0 1 chimp,human,macaque,orangutan, antisense antisense A549@0.799404,AG04450@0.888671,BJ@0.938808,GM12878@1.65561,H1HESC@1.9239,HELAS3@1.82047,HEPG2@2.02692,HMEC@0.814074,HSMM@0.603731,HUVEC@0.775545,K562@1.01047,MCF7@2.05588,NHEK@0.829122,NHLF@0.630862,SKNSHRA@3.06876, 0 0 0 0 ENSG00000253844.1 ENST00000521188.1 chr8:52874018-52935534 2 670 60844 intergenic 1.89 1 0,0,1 0 0,0,0 0 3.68511274735389 0 0 6.08482348300572 0 0 7.61370061139964 0 0 0 chimp,horse,human,macaque,orangutan, lincRNA lincRNA A549@0.0311785,AG04450@0,BJ@0,GM12878@0,H1HESC@0.014729,HELAS3@0.0129365,HEPG2@0.072265,HMEC@0.012186,HSMM@0.013569,HUVEC@0.0464615,K562@0,MCF7@0.032988,NHEK@0,NHLF@0.0173565,SKNSHRA@0.0418145, 0 0 0 0 ENSG00000254136.1 ENST00000523810.1 chr8:52908770-52920915 2 468 11675 intergenic 5.59 0 0,0,1 0 0,0,0 0 8.82364025695932 0 0 12.8249250535332 0 0 15.2973019271949 0 0 0 chimp,horse,human,macaque,marmoset, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0.0225995,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000254314.1 ENST00000520496.1 chr8:53063380-53067452 2 633 3437 intronic -3.65 0 0,1,0 0 0,0,0 45.0995260663507 108.487634565028 229.735 59.2669826224329 121.310154204248 244.002 60.6382306477093 135.669770148385 229.962 0 0 cat,chimp,horse,human,macaque,marmoset,orangutan, antisense antisense A549@0,AG04450@0.0111265,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000253551.1 ENST00000522541.1 chr8:53106922-53112140 2 822 4394 intronic 5.41 1 0,0,0 0 0,0,0 0 0 0 0 0 41.721 0 0 74.508 0 0 cat,chimp,elephant,horse,human,macaque,orangutan,panda, antisense antisense A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000253924.1 ENST00000522228.1 chr8:53207015-53214502 3 419 7064 intronic 0 0 0,1,0 0 0,0,0 0 65.6381653454134 0 0 51.1453850509626 87.91 0 53.5675254813137 80.56 1 1 chimp,human,macaque,marmoset,orangutan, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0.011707,H1HESC@0.004916,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000254687.1 ENST00000529837.1 chr8:54090131-54128983 2 556 38294 intergenic 1.59 0 0,1,0 0 0,0,0 0 1.68055047788165 0 0 1.39703347782942 0 0 4.90298741317178 0 0 0 chimp,horse,human,macaque,orangutan, antisense antisense A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0.0213485,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000254687.1 ENST00000524425.1 chr8:54090147-54155243 3 823 64269 intronic -5.62 0 0,1,0 0 0,0,0 0 6.30363005492539 0 0 7.43118766434829 0 0 11.2117350511133 0 0 0 chimp,elephant,human,macaque,orangutan, antisense antisense A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0.0213485,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000253369.1 ENST00000521558.1 chr8:54307771-54308506 2 592 141 intergenic -2.20 0 0,1,0 0 0,0,0 0 0 0 0 0 0 0 0 0 0 0 cat,chimp,dog,horse,human,macaque,marmoset,orangutan,pig, lincRNA lincRNA A549@0,AG04450@0.021714,BJ@0,GM12878@0,H1HESC@0.0292855,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0.22309,HUVEC@0,K562@0,MCF7@0.393533,NHEK@0,NHLF@0,SKNSHRA@0.007639, 0 0 0 0 ENSG00000254204.1 ENST00000521930.1 chr8:54427730-54428465 2 467 266 intergenic -2.16 0 0,1,0 0 0,0,0 0 0 0 0 0 0 0 0 0 0 0 chimp,dog,horse,human,macaque,orangutan, lincRNA lincRNA A549@0.013237,AG04450@0.009558,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0.009721,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000237807.3 ENST00000426023.1 chr8:54427731-54436491 2 2385 6373 intergenic 1.15 0 1,1,1 0 0,1,0 0 0 0 0 0 0 0 0 0 0 0 chimp,horse,human,macaque, lincRNA lincRNA A549@0,AG04450@2.43701,BJ@1.04091,GM12878@0,H1HESC@0.143869,HELAS3@0.005875,HEPG2@0.005856,HMEC@1.24759,HSMM@4.40184,HUVEC@0.33156,K562@0,MCF7@2.56634,NHEK@0.36802,NHLF@1.81753,SKNSHRA@0.090711, 0 0 0 0 ENSG00000251475.1 ENST00000508149.1 chr8:54811569-54821517 2 2237 7709 intronic 2.49 0 0,0,0 0 0,0,0 0 16.6724607601505 0 0 5.89531716175898 4.541 0 6.92177973796861 10.51 1 1 chimp,human,macaque,marmoset,orangutan, lincRNA lincRNA A549@0.747627,AG04450@0.193278,BJ@0.038393,GM12878@0.0185475,H1HESC@0.0670395,HELAS3@0.435083,HEPG2@0.453236,HMEC@0.195714,HSMM@0.0306235,HUVEC@0.281842,K562@0.185738,MCF7@0.090075,NHEK@1.03687,NHLF@0.0519205,SKNSHRA@0.499011, 0 0 0 0 ENSG00000254357.1 ENST00000522918.1 chr8:56429799-56433536 2 588 3147 intronic -7.52 0 0,0,0 0 0,0,0 0 14.8236415633937 0 0 2.46425166825548 0 0 7.98919605973944 0 1 1 chimp,human,macaque,marmoset,orangutan, antisense antisense A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000253151.1 ENST00000518261.1 chr8:56438745-56446511 2 863 6901 intergenic -3.75 0 0,0,1 0 0,0,0 282.125144843569 37.4350094189248 458.896 157.923522595597 21.4539921750471 449.109 163.457705677868 28.3850166642516 368.924 0 0 chimp,dog,guinea_pig,horse,human,macaque,marmoset,mouse,orangutan,panda,pig,rabbit,rat, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0.044486,H1HESC@0.136138,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000254325.1 ENST00000518552.1 chr8:56806154-56808276 2 649 1471 intronic -0.10 0 0,0,0 0 0,0,0 0 0 11.822 10.2419106317411 0 12.313 10.7734976887519 0 13.064 0 0 chimp,human,macaque,marmoset,mouse,orangutan, sense_intronic sense_intronic A549@0.0700005,AG04450@0.011791,BJ@0.0732815,GM12878@0.387799,H1HESC@0.0753585,HELAS3@0.0941745,HEPG2@0.0688355,HMEC@0,HSMM@0,HUVEC@0.178795,K562@0.174152,MCF7@0.085076,NHEK@0.0177113,NHLF@0,SKNSHRA@0.112028, 0 0 0 0 ENSG00000253603.1 ENST00000521403.1 chr8:56987151-56987833 2 555 125 intergenic -1.18 0 0,1,1 0 0,0,0 0 0 17.64 0 9.56 107.562 0 10.04 139.933 0 0 cat,chimp,horse,human,macaque,marmoset,orangutan,rabbit, antisense antisense A549@0.09292,AG04450@0.009813,BJ@0.0778445,GM12878@0.355185,H1HESC@0.214656,HELAS3@0.317337,HEPG2@0.153246,HMEC@0.029405,HSMM@0.003694,HUVEC@0.051143,K562@0.141806,MCF7@0.0862475,NHEK@0.038736,NHLF@0.159851,SKNSHRA@0.0640875, 0 0 0 0 ENSG00000254254.1 ENST00000518662.1 chr8:57358366-57464626 4 2639 103615 exonic 6.23 0 0,0,1 0 0,0,0 16.9488442591891 2.74643632678666 2.736 24.0606290261463 5.50228248805675 4.811 24.4899583175445 10.6484292814747 5.015 1 1 chimp,human,macaque,marmoset,orangutan, antisense antisense A549@0,AG04450@0,BJ@0.0012245,GM12878@0,H1HESC@0,HELAS3@0.0008845,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0.0010315,MCF7@0,NHEK@0,NHLF@0.001468,SKNSHRA@0, 64 2 0 0 ENSG00000254254.1 ENST00000522511.1 chr8:57401657-57439695 4 564 37468 intergenic 4.14 0 0,0,0 0 0,0,0 5.93262411347518 4.41349951959005 0 12.1170212765957 8.57977474111241 0 7.83687943262411 9.03928685811893 0 0 0 cat,chimp,dog,guinea_pig,horse,human,macaque,marmoset,mouse,orangutan,pig,rat, antisense antisense A549@0,AG04450@0,BJ@0.0012245,GM12878@0,H1HESC@0,HELAS3@0.0008845,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0.0010315,MCF7@0,NHEK@0,NHLF@0.001468,SKNSHRA@0, 0 0 0 0 ENSG00000246430.2 ENST00000519144.1 chr8:57408805-57472145 3 561 62775 intergenic 1.71 0 0,1,1 0 0,0,0 0 4.14128235762644 0 6.54188948306595 6.32939864595779 0 1.88948306595365 7.1405177220231 0 0 0 chimp,dog,human,macaque,marmoset,orangutan, lincRNA lincRNA A549@0,AG04450@0.709659,BJ@8.87035,GM12878@0.0018425,H1HESC@0,HELAS3@0.043215,HEPG2@0.0049235,HMEC@0,HSMM@0.427824,HUVEC@0,K562@0,MCF7@0,NHEK@0.042949,NHLF@1.83058,SKNSHRA@0.001137, 0 0 0 0 ENSG00000246430.2 ENST00000499425.1 chr8:57430880-57472230 3 2363 38983 intergenic 0.61 0 0,0,0 0 0,0,0 9.95344900550148 3.59415642716056 0 30.459162082099 4.02465177128492 0 30.5459162082099 5.0486878895929 0 0 0 chimp,human,macaque,marmoset,orangutan,rabbit, lincRNA lincRNA A549@0,AG04450@0.709659,BJ@8.87035,GM12878@0.0018425,H1HESC@0,HELAS3@0.043215,HEPG2@0.0049235,HMEC@0,HSMM@0.427824,HUVEC@0,K562@0,MCF7@0,NHEK@0.042949,NHLF@1.83058,SKNSHRA@0.001137, 0 0 0 0 ENSG00000246430.2 ENST00000523786.1 chr8:57432678-57472056 3 555 38819 intergenic 3.26 0 0,1,0 0 0,0,0 0 3.60934078672815 0 0 4.04165485973364 0 0 5.07001725958938 0 1 1 chimp,human,macaque,marmoset,orangutan, lincRNA lincRNA A549@0,AG04450@0.709659,BJ@8.87035,GM12878@0.0018425,H1HESC@0,HELAS3@0.043215,HEPG2@0.0049235,HMEC@0,HSMM@0.427824,HUVEC@0,K562@0,MCF7@0,NHEK@0.042949,NHLF@1.83058,SKNSHRA@0.001137, 0 0 0 0 ENSG00000246430.2 ENST00000521483.1 chr8:57432718-57472056 3 551 38783 intergenic 0.36 0 0,1,0 0 0,0,0 0 3.61269112755589 0 0 4.04540649253539 0 0 5.07472346131037 0 1 1 chimp,human,macaque,marmoset,orangutan, lincRNA lincRNA A549@0,AG04450@0.709659,BJ@8.87035,GM12878@0.0018425,H1HESC@0,HELAS3@0.043215,HEPG2@0.0049235,HMEC@0,HSMM@0.427824,HUVEC@0,K562@0,MCF7@0,NHEK@0.042949,NHLF@1.83058,SKNSHRA@0.001137, 0 0 0 0 ENSG00000246430.2 ENST00000523664.1 chr8:57432874-57472243 2 551 38816 intergenic 0.71 0 0,0,0 0 0,0,0 0 3.60961974443528 0 0 4.04196723000824 0 0 5.07040910964551 0 0 1 chimp,human,marmoset,orangutan, lincRNA lincRNA A549@0,AG04450@0.709659,BJ@8.87035,GM12878@0.0018425,H1HESC@0,HELAS3@0.043215,HEPG2@0.0049235,HMEC@0,HSMM@0.427824,HUVEC@0,K562@0,MCF7@0,NHEK@0.042949,NHLF@1.83058,SKNSHRA@0.001137, 0 0 0 0 ENSG00000246430.2 ENST00000524338.1 chr8:57432937-57472382 2 559 38884 intergenic 0.36 0 0,1,0 0 0,0,0 0 3.60330727291431 0 0 4.03489867297603 0 0 5.06154202242568 0 0 1 chimp,human,macaque,marmoset, lincRNA lincRNA A549@0,AG04450@0.709659,BJ@8.87035,GM12878@0.0018425,H1HESC@0,HELAS3@0.043215,HEPG2@0.0049235,HMEC@0,HSMM@0.427824,HUVEC@0,K562@0,MCF7@0,NHEK@0.042949,NHLF@1.83058,SKNSHRA@0.001137, 0 0 0 0 ENSG00000246430.2 ENST00000518943.1 chr8:57432946-57472352 2 567 38837 intergenic 0.71 0 0,1,0 0 0,0,0 0 3.60766794551587 0 0 4.03978165151788 0 0 5.06766743054304 0 1 1 chimp,human,macaque,marmoset,orangutan, lincRNA lincRNA A549@0,AG04450@0.709659,BJ@8.87035,GM12878@0.0018425,H1HESC@0,HELAS3@0.043215,HEPG2@0.0049235,HMEC@0,HSMM@0.427824,HUVEC@0,K562@0,MCF7@0,NHEK@0.042949,NHLF@1.83058,SKNSHRA@0.001137, 0 0 0 0 ENSG00000253139.1 ENST00000523724.1 chr8:57449317-57453056 2 553 3184 intergenic 5.40 0 0,0,0 0 0,0,0 0 0 0 0 4.30904522613065 0 0 8.83542713567839 0 0 1 human,macaque,marmoset,orangutan, lincRNA lincRNA A549@0,AG04450@0.026477,BJ@0.95996,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0.0299915,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0.009846,SKNSHRA@0, 0 0 0 0 ENSG00000253139.1 ENST00000523166.1 chr8:57449616-57452993 3 496 2877 intergenic -5.67 0 0,0,0 0 0,0,0 0 0 0 0 4.76885644768856 0 0 9.7782412234967 0 0 0 chimp,elephant,human,macaque,marmoset,orangutan,panda, lincRNA lincRNA A549@0,AG04450@0.026477,BJ@0.95996,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0.0299915,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0.009846,SKNSHRA@0, 0 0 0 0 ENSG00000254055.1 ENST00000521215.1 chr8:57552460-57569024 4 580 15978 intergenic 1.59 0 0,1,0 0 0,0,0 0 0 0 0 1.80485667793216 0 0 4.03961697333834 0 0 0 chimp,human,macaque,orangutan,rabbit, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000253301.1 ENST00000519314.1 chr8:58055248-58113647 4 558 57835 intergenic 2.78 0 0,1,0 0 0,0,0 0 0 0 36.5878136200717 2.09807210166854 0 37.7347670250896 4.97665773320654 0 0 0 chimp,horse,human,macaque,marmoset,orangutan, processed_transcript processed_transcript A549@0,AG04450@0,BJ@0,GM12878@0.0008795,H1HESC@0,HELAS3@0.001821,HEPG2@0.0018985,HMEC@0,HSMM@0,HUVEC@0.001525,K562@1.46266,MCF7@0.000897,NHEK@0.000557,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000253301.1 ENST00000519241.1 chr8:58055262-58132001 4 505 76228 intergenic -0.31 0 0,0,1 0 0,0,0 0 0 0 40.4277227722772 1.59182977383639 0 41.6950495049505 3.77584352206538 0 0 0 chimp,horse,human,macaque,marmoset,orangutan, processed_transcript processed_transcript A549@0,AG04450@0,BJ@0,GM12878@0.0008795,H1HESC@0,HELAS3@0.001821,HEPG2@0.0018985,HMEC@0,HSMM@0,HUVEC@0.001525,K562@1.46266,MCF7@0.000897,NHEK@0.000557,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000253301.1 ENST00000521653.1 chr8:58106149-58121191 4 553 14483 intergenic 4.06 0 0,1,0 1 0,0,0 0 0 0 0 0 0 0 9.0707035835117 0 0 1 chimp,human,macaque,orangutan, processed_transcript processed_transcript A549@0,AG04450@0,BJ@0,GM12878@0.0008795,H1HESC@0,HELAS3@0.001821,HEPG2@0.0018985,HMEC@0,HSMM@0,HUVEC@0.001525,K562@1.46266,MCF7@0.000897,NHEK@0.000557,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000253301.1 ENST00000518556.1 chr8:58106153-58115727 3 470 9100 intergenic -0.25 0 0,1,0 1 0,0,0 0 0 0 0 0 0 0 14.4363736263736 0 1 1 chimp,human,macaque,marmoset,orangutan, processed_transcript processed_transcript A549@0,AG04450@0,BJ@0,GM12878@0.0008795,H1HESC@0,HELAS3@0.001821,HEPG2@0.0018985,HMEC@0,HSMM@0,HUVEC@0.001525,K562@1.46266,MCF7@0.000897,NHEK@0.000557,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000253301.1 ENST00000523341.1 chr8:58106179-58152857 5 709 45961 intergenic 3.22 1 1,1,1 1 0,0,0 0 0 0 0 2.74584974217271 0 0 22.624616522704 0 0 0 chimp,cow,dog,elephant,guinea_pig,horse,human,macaque,marmoset,opossum,orangutan,pig,rabbit,rat, processed_transcript processed_transcript A549@0,AG04450@0,BJ@0,GM12878@0.0008795,H1HESC@0,HELAS3@0.001821,HEPG2@0.0018985,HMEC@0,HSMM@0,HUVEC@0.001525,K562@1.46266,MCF7@0.000897,NHEK@0.000557,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000253301.1 ENST00000520929.1 chr8:58130835-58132126 4 407 878 intergenic 4.15 0 0,0,0 0 0,0,0 0 0 0 0 0 0 0 0 0 0 1 chimp,human,macaque,orangutan, processed_transcript processed_transcript A549@0,AG04450@0,BJ@0,GM12878@0.0008795,H1HESC@0,HELAS3@0.001821,HEPG2@0.0018985,HMEC@0,HSMM@0,HUVEC@0.001525,K562@1.46266,MCF7@0.000897,NHEK@0.000557,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000253301.1 ENST00000521132.1 chr8:58131093-58132795 3 399 1299 intergenic -1.20 0 0,0,0 0 0,0,0 0 0 0 0 0 0 0 0 0 0 1 chimp,human,macaque,orangutan, processed_transcript processed_transcript A549@0,AG04450@0,BJ@0,GM12878@0.0008795,H1HESC@0,HELAS3@0.001821,HEPG2@0.0018985,HMEC@0,HSMM@0,HUVEC@0.001525,K562@1.46266,MCF7@0.000897,NHEK@0.000557,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000253301.1 ENST00000519160.1 chr8:58131648-58145195 8 2284 11249 intergenic 2.19 0 0,0,1 0 0,0,0 0 0 0 12.1760070052539 8.74673304293715 0 16.1182136602452 45.7362432216197 0 0 1 human,macaque,orangutan, processed_transcript processed_transcript A549@0,AG04450@0,BJ@0,GM12878@0.0008795,H1HESC@0,HELAS3@0.001821,HEPG2@0.0018985,HMEC@0,HSMM@0,HUVEC@0.001525,K562@1.46266,MCF7@0.000897,NHEK@0.000557,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000253301.1 ENST00000517611.1 chr8:58131938-58133297 3 577 778 intergenic -3.93 0 0,0,0 0 0,0,0 0 0 0 0 0 0 0 0 0 0 1 chimp,human,macaque,orangutan, processed_transcript processed_transcript A549@0,AG04450@0,BJ@0,GM12878@0.0008795,H1HESC@0,HELAS3@0.001821,HEPG2@0.0018985,HMEC@0,HSMM@0,HUVEC@0.001525,K562@1.46266,MCF7@0.000897,NHEK@0.000557,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000253614.1 ENST00000522622.1 chr8:58173785-58179172 3 2968 2415 intergenic 3.72 1 0,1,0 0 0,0,0 0 0 0 0 0 0 5.35714285714286 0 0 0 1 chimp,human,orangutan, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0.0015725,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000215117.5 ENST00000521663.1 chr8:58192102-58197290 4 1871 3311 intergenic 8.48 1 0,0,0 0 0,1,0 0 0 0 0 0 0 63.0187065740246 86.8882512836001 58.042 1 1 chimp,human,macaque,marmoset,orangutan, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0.199359,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000253871.1 ENST00000519714.1 chr8:58256346-58277416 9 1823 19231 intergenic 0.98 0 0,1,1 0 0,0,0 0 0 0 0 0 0 0 6.90530913629036 0 0 0 chimp,horse,human,macaque,orangutan, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000253871.1 ENST00000521446.1 chr8:58256366-58259402 3 566 2466 intergenic -3.13 0 0,1,0 0 0,0,0 0 0 0 0 0 0 0 0 0 0 1 chimp,human,macaque,orangutan, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000253821.1 ENST00000520370.1 chr8:58405443-58458502 2 565 52492 intergenic 2.41 0 0,1,0 0 0,0,0 0 1.58972795854606 0 0 3.91004343519013 0 0 5.446601386878 0 0 0 cat,chimp,dog,horse,human,macaque,marmoset,orangutan,panda,pig,rabbit, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0.012061,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000253821.1 ENST00000520881.1 chr8:58405458-58504118 2 155 98503 intergenic 0 0 0,1,0 0 0,0,0 0 1.42120544551943 0 0 3.37217140594703 0 0 4.43940793681411 0 0 1 chimp,human, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0.012061,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000253322.1 ENST00000520426.1 chr8:58506725-58717588 3 567 210292 intergenic -11.43 0 0,0,1 0 0,0,0 0 2.92371559545774 0 0 4.04954063873091 1.434 0 4.97660396020772 1.36 0 0 chimp,elephant,human,macaque,marmoset,orangutan,panda,rabbit, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000254139.1 ENST00000518934.1 chr8:58658708-58662758 2 2459 1589 intergenic 1.38 0 0,0,0 0 0,0,0 0 0 0 13.8304188694591 0 0 13.962179747865 0 0 0 0 chimp,horse,human,macaque,marmoset,orangutan, lincRNA lincRNA A549@0,AG04450@0,BJ@0.002001,GM12878@0,H1HESC@0,HELAS3@0.0018365,HEPG2@0.001768,HMEC@0,HSMM@0.058789,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0.049518,SKNSHRA@0.001844, 0 0 0 0 ENSG00000253376.1 ENST00000522281.1 chr8:58802135-58803368 2 778 453 intergenic -4.30 0 0,0,0 0 0,0,0 0 0 0 0 0 0 0 0 0 1 1 chimp,human,macaque,marmoset,orangutan, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0.0106385,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0.441798,MCF7@0,NHEK@0,NHLF@0.044861,SKNSHRA@0, 0 0 0 0 ENSG00000205293.3 ENST00000522992.1 chr8:58890917-58896685 3 2106 3658 intergenic -0.31 0 0,0,0 0 0,1,0 3.49477682811016 2.26353198469109 0 11.6951566951567 2.20667031164571 1.673 12.6752136752137 6.76599234554401 1.757 1 1 chimp,human,macaque,marmoset,orangutan, lincRNA lincRNA A549@0.037953,AG04450@0.0064845,BJ@0.025403,GM12878@0.0124035,H1HESC@0.0082485,HELAS3@0.0088655,HEPG2@0,HMEC@0,HSMM@0.005854,HUVEC@0,K562@0.175486,MCF7@0.0038995,NHEK@0,NHLF@0.0109995,SKNSHRA@0.004307, 0 0 0 0 ENSG00000253523.1 ENST00000518750.1 chr8:58943893-58945241 2 875 471 exonic 2.69 0 0,0,1 0 0,0,0 0 0 0 1.41714285714286 9.01273885350319 0 1.43428571428571 9.39490445859873 0 0 0 chimp,dog,guinea_pig,horse,human,macaque,marmoset,orangutan,panda,pig,rabbit, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000253116.1 ENST00000518536.1 chr8:59004001-59018853 4 621 14225 intronic 1.23 0 0,0,0 0 0,0,0 0 1.60618629173989 0 0 1.63318101933216 0 0 3.0631985940246 0 1 1 chimp,human,macaque,marmoset,orangutan, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000253281.1 ENST00000519981.1 chr8:59168330-59184660 8 1682 14634 intergenic 0.83 0 0,0,0 0 0,0,0 0 28.6341396747301 0 13.3620689655172 18.7540658739921 0 12.5344827586207 22.2192155254886 0 0 0 chimp,dog,elephant,horse,human,macaque,marmoset,orangutan, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0.007709,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000253281.1 ENST00000523886.1 chr8:59172290-59173312 2 521 499 intergenic 0.83 0 0,1,0 0 0,0,0 0 0 0 4.5873320537428 0 6.817 0 0 7.949 0 0 chimp,dog,elephant,horse,human,macaque,marmoset,orangutan, lincRNA retained_intron A549@0,AG04450@0,BJ@0,GM12878@0.007709,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000253281.1 ENST00000518779.1 chr8:59172418-59184601 2 203 11978 intergenic 0 0 0,0,1 0 0,0,0 0 0 0 0 1.59484054099182 0 0 1.51903489731174 0 0 0 chimp,dog,elephant,horse,human,macaque,marmoset,orangutan,panda,rabbit, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0.007709,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000253281.1 ENST00000522744.1 chr8:59173232-59184678 2 329 11115 intergenic -3.14 0 0,0,0 0 0,0,0 0 0 0 7.26443768996961 1.50364372469636 0 0 1.63697705802969 0 0 0 chimp,horse,human,macaque,orangutan,rabbit, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0.007709,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000254048.1 ENST00000518011.1 chr8:59904279-59905497 2 549 667 intronic -9.14 0 0,0,1 0 0,0,0 132.182149362477 37.9490254872564 0 88.83970856102 17.6116941529235 0 116.888888888889 18.3748125937031 0 0 0 cat,chimp,elephant,horse,human,macaque,marmoset,opossum,orangutan,panda,pig,rabbit,rat, sense_intronic sense_intronic A549@0,AG04450@1.96695,BJ@0.97067,GM12878@0,H1HESC@1.64582,HELAS3@0,HEPG2@0.0074665,HMEC@0,HSMM@0,HUVEC@1.27599,K562@0,MCF7@0,NHEK@0.000678,NHLF@0,SKNSHRA@0.919539, 0 0 0 0 ENSG00000167912.5 ENST00000523683.1 chr8:60031599-60032590 2 690 299 exonic 0 0 0,0,0 0 0,1,0 9.51014492753623 203.973244147157 206.682 192.731884057971 309.130434782609 254.72 265.324637681159 130.90635451505 229.207 0 0 chimp,dog,elephant,human,macaque,marmoset,mouse,opossum,orangutan,pig,rabbit,rat, lincRNA processed_transcript A549@0.0275405,AG04450@1.55774,BJ@1.08072,GM12878@0,H1HESC@2.58711,HELAS3@0.202377,HEPG2@0.026701,HMEC@0.011384,HSMM@0.318495,HUVEC@1.34146,K562@0.068488,MCF7@0.0019055,NHEK@0.170506,NHLF@1.37574,SKNSHRA@0.954749, 0 0 0 0 ENSG00000167912.5 ENST00000518993.1 chr8:60031777-60033905 2 1077 1049 intergenic 0.73 1 1,1,1 0 0,1,0 6.09285051067781 58.139180171592 206.682 30.8152274837512 101.424213536702 340.373 15.338904363974 56.2526215443279 300.719 0 0 chimp,dog,elephant,horse,human,macaque,marmoset,orangutan,panda, lincRNA processed_transcript A549@0.0275405,AG04450@1.55774,BJ@1.08072,GM12878@0,H1HESC@2.58711,HELAS3@0.202377,HEPG2@0.026701,HMEC@0.011384,HSMM@0.318495,HUVEC@1.34146,K562@0.068488,MCF7@0.0019055,NHEK@0.170506,NHLF@1.37574,SKNSHRA@0.954749, 0 0 0 0 ENSG00000167912.5 ENST00000517898.1 chr8:60032505-60033874 2 1104 263 intergenic 0.73 1 0,0,1 0 0,1,0 0 0 67.936 1.45833333333333 0 271.513 1.0643115942029 0 196.164 0 0 chimp,dog,elephant,horse,human,macaque,marmoset,orangutan,panda, lincRNA processed_transcript A549@0.0275405,AG04450@1.55774,BJ@1.08072,GM12878@0,H1HESC@2.58711,HELAS3@0.202377,HEPG2@0.026701,HMEC@0.011384,HSMM@0.318495,HUVEC@1.34146,K562@0.068488,MCF7@0.0019055,NHEK@0.170506,NHLF@1.37574,SKNSHRA@0.954749, 0 0 0 0 ENSG00000253260.1 ENST00000521456.1 chr8:60473886-60506260 2 356 32016 intergenic 0 0 0,1,1 0 0,0,0 0 0.510057471264368 0 0 1.25540354822589 0 0 2.46017616191904 0 0 0 chimp,human,marmoset,panda,rabbit, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0.0228405,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000253879.1 ENST00000522898.1 chr8:60513937-60519564 2 549 5076 intergenic -3.82 0 0,0,0 0 0,0,0 0 35.204097714736 34.153 0 18.3707643814027 23.642 0 24.9649330181245 37.481 0 1 chimp,human,orangutan, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000253879.1 ENST00000521274.1 chr8:60513963-60526334 3 512 11855 intergenic 4.04 0 0,0,0 0 0,0,0 205.51171875 15.0734711092366 34.153 254.068359375 7.8658793757908 23.642 249.900390625 10.689329396879 37.481 0 0 chimp,cow,dog,elephant,guinea_pig,horse,human,macaque,marmoset,mouse,orangutan,panda,pig,rabbit,rat, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000254775.1 ENST00000531077.1 chr8:60962146-60987274 3 430 24694 intergenic -3.47 0 0,0,0 0 0,0,0 113.96511627907 63.1310034826274 0 68.2813953488372 67.6974568721147 0 106.597674418605 75.8423908641775 0 0 0 cat,chimp,elephant,guinea_pig,human,macaque,marmoset,orangutan,pig, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0.0283305,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000251396.2 ENST00000530725.1 chr8:61297147-61429339 4 573 131613 intergenic -10.97 0 0,1,0 1 0,0,0 0 7.93737700683063 40.404 0 9.75866365784535 169.547 0 15.0619239740755 163.917 0 0 chimp,human,macaque,marmoset,orangutan,panda, processed_transcript processed_transcript A549@0.063714,AG04450@0.114888,BJ@0.330995,GM12878@0.0451295,H1HESC@0.173462,HELAS3@0.0316385,HEPG2@0.0172335,HMEC@0.072886,HSMM@0.104552,HUVEC@0.031276,K562@0.200041,MCF7@0.0817115,NHEK@0.112567,NHLF@0.134058,SKNSHRA@0.388796, 0 0 0 0 ENSG00000251396.2 ENST00000506428.1 chr8:61315771-61326377 3 2441 8161 intergenic -1.73 0 0,0,0 0 0,0,0 71.8811962310528 10.8574929542948 218.428 74.9614911921344 21.1208185271413 211.808 83.7935272429333 20.241269452273 212.757 0 0 cat,chimp,cow,dog,guinea_pig,horse,human,macaque,marmoset,orangutan,panda,pig,rabbit, processed_transcript processed_transcript A549@0.063714,AG04450@0.114888,BJ@0.330995,GM12878@0.0451295,H1HESC@0.173462,HELAS3@0.0316385,HEPG2@0.0172335,HMEC@0.072886,HSMM@0.104552,HUVEC@0.031276,K562@0.200041,MCF7@0.0817115,NHEK@0.112567,NHLF@0.134058,SKNSHRA@0.388796, 0 0 0 0 ENSG00000251396.2 ENST00000531654.1 chr8:61317238-61326489 4 1343 7902 intergenic 4.98 0 0,0,1 0 0,0,0 76.6701414743112 11.213363705391 158.172 104.034996276992 21.8130852948621 171.251 124.258376768429 20.9047076689446 176.229 0 1 chimp,human,macaque,orangutan, processed_transcript processed_transcript A549@0.063714,AG04450@0.114888,BJ@0.330995,GM12878@0.0451295,H1HESC@0.173462,HELAS3@0.0316385,HEPG2@0.0172335,HMEC@0.072886,HSMM@0.104552,HUVEC@0.031276,K562@0.200041,MCF7@0.0817115,NHEK@0.112567,NHLF@0.134058,SKNSHRA@0.388796, 0 0 0 0 ENSG00000251396.2 ENST00000476425.2 chr8:61317570-61421318 3 470 103274 intergenic -1.73 0 0,0,0 0 0,0,0 0 6.88810349168232 0 113.26170212766 8.14256250363112 0 123.089361702128 9.83308480353236 0 0 0 cat,chimp,cow,dog,elephant,guinea_pig,horse,human,macaque,marmoset,mouse,opossum,orangutan,panda,pig, processed_transcript processed_transcript A549@0.063714,AG04450@0.114888,BJ@0.330995,GM12878@0.0451295,H1HESC@0.173462,HELAS3@0.0316385,HEPG2@0.0172335,HMEC@0.072886,HSMM@0.104552,HUVEC@0.031276,K562@0.200041,MCF7@0.0817115,NHEK@0.112567,NHLF@0.134058,SKNSHRA@0.388796, 0 0 0 0 ENSG00000251396.2 ENST00000534117.1 chr8:61324899-61325813 2 500 412 intergenic 0 0 0,0,0 0 0,0,0 0 0 225.422 27.41 0 214.173 28.16 0 225.266 0 0 chimp,cow,dog,human,macaque,marmoset,orangutan,panda,pig, processed_transcript processed_transcript A549@0.063714,AG04450@0.114888,BJ@0.330995,GM12878@0.0451295,H1HESC@0.173462,HELAS3@0.0316385,HEPG2@0.0172335,HMEC@0.072886,HSMM@0.104552,HUVEC@0.031276,K562@0.200041,MCF7@0.0817115,NHEK@0.112567,NHLF@0.134058,SKNSHRA@0.388796, 0 0 0 0 ENSG00000251396.2 ENST00000530033.1 chr8:61325569-61326211 2 556 84 intergenic 4.98 0 0,0,0 0 0,0,0 0 0 225.422 0 0 216.657 0 0 231.846 0 1 chimp,human,macaque,orangutan, processed_transcript processed_transcript A549@0.063714,AG04450@0.114888,BJ@0.330995,GM12878@0.0451295,H1HESC@0.173462,HELAS3@0.0316385,HEPG2@0.0172335,HMEC@0.072886,HSMM@0.104552,HUVEC@0.031276,K562@0.200041,MCF7@0.0817115,NHEK@0.112567,NHLF@0.134058,SKNSHRA@0.388796, 0 0 0 0 ENSG00000251396.2 ENST00000532232.1 chr8:61381422-61429354 3 565 47363 intergenic 0 0 0,1,0 1 0,0,0 0 1.81306082807255 40.404 0 3.25479804911006 169.547 0 6.40829339357727 163.917 0 0 chimp,human,macaque,orangutan,panda, processed_transcript processed_transcript A549@0.063714,AG04450@0.114888,BJ@0.330995,GM12878@0.0451295,H1HESC@0.173462,HELAS3@0.0316385,HEPG2@0.0172335,HMEC@0.072886,HSMM@0.104552,HUVEC@0.031276,K562@0.200041,MCF7@0.0817115,NHEK@0.112567,NHLF@0.134058,SKNSHRA@0.388796, 0 0 0 0 ENSG00000255321.1 ENST00000531379.1 chr8:61464516-61465595 2 687 390 intronic 0 0 0,0,0 0 0,0,0 0 0 0 0 0 0 0 0 0 0 0 chimp,horse,human,macaque,marmoset,orangutan,rabbit, antisense antisense A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000228862.3 ENST00000532768.1 chr8:61544068-61545330 2 573 687 intergenic -6.65 0 0,0,0 0 0,1,0 0 0 0 0 0 0 0 0 0 1 1 chimp,human,macaque,marmoset,orangutan, lincRNA lincRNA A549@0.000609,AG04450@0,BJ@0,GM12878@0.0005655,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0.000682,K562@0,MCF7@0.005982,NHEK@0,NHLF@0,SKNSHRA@0.0012755, 2 44 0 0 ENSG00000228862.3 ENST00000526470.1 chr8:61544114-61548830 2 3562 1152 intergenic 2.43 0 0,1,0 0 0,0,0 0 0 0 0.626614261650758 0 0 0.654407636159461 0 0 1 1 chimp,human,macaque,marmoset,orangutan, lincRNA lincRNA A549@0.000609,AG04450@0,BJ@0,GM12878@0.0005655,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0.000682,K562@0,MCF7@0.005982,NHEK@0,NHLF@0,SKNSHRA@0.0012755, 0 0 0 0 ENSG00000254869.1 ENST00000529518.1 chr8:61565061-61566120 3 427 628 intergenic 1.28 0 0,1,1 0 0,0,0 0 0 0 15.4215456674473 0 10.003 15.9367681498829 0 8.565 1 1 chimp,human,macaque,marmoset,orangutan, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0.016177,H1HESC@0,HELAS3@0.015764,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0.023486, 0 0 0 0 ENSG00000255289.1 ENST00000373384.4 chr8:61573379-61577089 2 527 3181 intergenic -10.52 0 0,1,0 0 0,0,0 0 5.71015403961019 0 0 1.10311222885885 14.35 0 1.11002829298963 14.555 0 0 chimp,horse,human,macaque,marmoset,orangutan, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0.0389755,HELAS3@0.0170855,HEPG2@0.0092695,HMEC@0,HSMM@0,HUVEC@0.0056255,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0.0631905, 0 0 0 0 ENSG00000254432.1 ENST00000534670.1 chr8:61721294-61722165 2 299 570 intronic -0.67 1 0,1,1 0 0,0,0 0 107.845614035088 0 0 0 0 0 0 4.553 0 0 chimp,cow,horse,human,macaque,marmoset,orangutan,pig, antisense antisense A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000254777.1 ENST00000526936.1 chr8:61822612-61879015 3 554 55845 intergenic -0.14 0 0,1,0 0 0,0,0 0 49.5430924881368 189.794 5.51263537906137 317.245214432805 186.939 4.00541516245487 368.955662995792 196.455 0 0 chimp,horse,human,macaque,marmoset,orangutan, lincRNA lincRNA A549@0,AG04450@0.004841,BJ@0,GM12878@0.096017,H1HESC@0.0075755,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0.027473,HUVEC@0.005131,K562@0,MCF7@0,NHEK@0.0206963,NHLF@0.007678,SKNSHRA@0.0185605, 0 0 0 0 ENSG00000254777.1 ENST00000529234.1 chr8:61823149-61875984 5 575 52252 intergenic 2.29 0 0,0,0 0 0,0,0 9.28 39.0851067901707 112.359 10.4695652173913 46.9365191762995 105.698 10.984347826087 52.7332159534563 118.705 0 0 chimp,cow,elephant,horse,human,macaque,marmoset,orangutan,panda,pig,rabbit, lincRNA lincRNA A549@0,AG04450@0.004841,BJ@0,GM12878@0.096017,H1HESC@0.0075755,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0.027473,HUVEC@0.005131,K562@0,MCF7@0,NHEK@0.0206963,NHLF@0.007678,SKNSHRA@0.0185605, 0 0 0 0 ENSG00000254777.1 ENST00000527672.1 chr8:61831540-61879116 5 921 46647 intergenic 2.29 0 0,0,1 0 0,0,0 26.9674267100977 49.4763221643407 0 20.9446254071661 55.6508671511565 9.266 20.8469055374593 61.1672776384333 9.405 1 1 chimp,human,macaque,marmoset,orangutan, lincRNA lincRNA A549@0,AG04450@0.004841,BJ@0,GM12878@0.096017,H1HESC@0.0075755,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0.027473,HUVEC@0.005131,K562@0,MCF7@0,NHEK@0.0206963,NHLF@0.007678,SKNSHRA@0.0185605, 0 0 0 0 ENSG00000254802.1 ENST00000525556.1 chr8:61878361-61880334 2 857 1114 intergenic 11.39 0 1,1,1 0 0,0,0 0 0 0 0 4.98653500897666 0 0 5.04488330341113 0 1 1 chimp,human,macaque,marmoset,orangutan, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0.0115225,HELAS3@0,HEPG2@0,HMEC@0,HSMM@1.03331,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0.0434315, 0 0 0 0 ENSG00000254222.1 ENST00000521378.1 chr8:62177183-62204598 3 384 27027 intronic 0 1 0,0,0 0 0,0,0 0 23.999851999852 17.856 0 25.033337033337 8.178 0 23.5874125874126 11.07 0 0 NA antisense antisense A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0.014073,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000253711.1 ENST00000518064.1 chr8:62212723-62213628 2 577 326 exonic -1.97 0 0,1,0 0 0,0,0 169.213171577123 0 0 164.639514731369 0 0 148.911611785095 14.1840490797546 0 0 0 cat,chimp,cow,elephant,guinea_pig,horse,human,macaque,marmoset,mouse,opossum,orangutan,panda,pig,rabbit,rat, antisense antisense A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000253711.1 ENST00000521801.1 chr8:62213078-62213577 2 272 225 intronic -5.98 0 0,0,0 0 0,0,0 0 0 0 0 0 0 0 20.5511111111111 0 0 0 NA antisense antisense A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000251127.2 ENST00000505627.2 chr8:62671653-62678528 2 2748 4125 intergenic 4.31 0 0,0,1 0 0,0,0 0 0 0 1.20633187772926 0.927030303030303 0 1.25363901018923 0.973575757575758 0 0 1 chimp,human,marmoset, lincRNA lincRNA A549@0.632855,AG04450@0.03567,BJ@0.0094545,GM12878@0,H1HESC@0,HELAS3@0.181876,HEPG2@0.26397,HMEC@0,HSMM@0,HUVEC@0.0217895,K562@0.0988495,MCF7@0.004486,NHEK@0,NHLF@0.0084825,SKNSHRA@0.107665, 0 0 0 0 ENSG00000254119.1 ENST00000520862.1 chr8:62697606-62765324 4 532 67180 intergenic -1.72 0 0,0,0 0 0,0,0 0 1.24117296814528 0 5.43796992481203 1.97328073831497 0 5.62406015037594 5.47003572491813 0 0 0 chimp,horse,human,macaque,marmoset,orangutan, lincRNA lincRNA A549@0.0939545,AG04450@0,BJ@0,GM12878@0.356851,H1HESC@0,HELAS3@0.005735,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0.005712,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0.011517, 0 0 0 0 ENSG00000253834.1 ENST00000518489.1 chr8:62734040-62737811 2 604 3165 intergenic -2.58 0 0,0,0 0 0,0,0 0 0 29.512 0 0 24.76 0 0 38.35 0 0 chimp,elephant,horse,human,macaque,orangutan, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0.0273815,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000254119.1 ENST00000523042.1 chr8:62737887-62765264 4 531 26840 intergenic 0.02 0 0,0,0 0 0,0,0 0 1.09955290611028 0 5.44821092278719 2.15022354694486 0 5.6346516007533 7.4182563338301 0 1 1 chimp,human,macaque,marmoset,orangutan, lincRNA lincRNA A549@0.0939545,AG04450@0,BJ@0,GM12878@0.356851,H1HESC@0,HELAS3@0.005735,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0.005712,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0.011517, 0 0 0 0 ENSG00000254119.1 ENST00000518593.1 chr8:62737907-62856739 4 465 118361 intergenic -1.72 0 0,0,0 0 0,0,0 0 1.72827198148039 0 1.69677419354839 3.43758501533444 1.841 1.75483870967742 6.64617568286851 1.904 0 1 chimp,human,macaque,orangutan, lincRNA lincRNA A549@0.0939545,AG04450@0,BJ@0,GM12878@0.356851,H1HESC@0,HELAS3@0.005735,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0.005712,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0.011517, 0 0 0 0 ENSG00000254119.1 ENST00000519452.1 chr8:62737996-62835382 4 468 96912 intergenic -1.72 0 0,0,0 0 0,0,0 0 1.05910516757471 0 0 2.52497110780915 2.893 0 5.85917120686809 2.992 0 1 chimp,human,macaque,orangutan, lincRNA lincRNA A549@0.0939545,AG04450@0,BJ@0,GM12878@0.356851,H1HESC@0,HELAS3@0.005735,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0.005712,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0.011517, 0 0 0 0 ENSG00000254119.1 ENST00000519967.1 chr8:62738028-62786738 4 426 48278 intergenic -1.72 0 0,0,1 0 0,0,0 0 0.611292928456026 0 0 1.53283068892663 2.893 0 4.99892290484279 2.992 0 0 chimp,cow,human,macaque,orangutan,rabbit, lincRNA lincRNA A549@0.0939545,AG04450@0,BJ@0,GM12878@0.356851,H1HESC@0,HELAS3@0.005735,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0.005712,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0.011517, 0 0 0 0 ENSG00000254119.1 ENST00000517953.1 chr8:62747476-62768411 4 435 20494 intergenic -4.70 0 0,0,0 0 0,0,0 0 0 0 0 0 0 0 6.81706841026642 4.617 0 1 chimp,human,macaque,orangutan, lincRNA lincRNA A549@0.0939545,AG04450@0,BJ@0,GM12878@0.356851,H1HESC@0,HELAS3@0.005735,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0.005712,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0.011517, 0 0 0 0 ENSG00000254119.1 ENST00000520097.1 chr8:62747507-62807294 4 502 59279 intergenic 0 0 0,0,0 0 0,0,0 0 0 0 6.42231075697211 1.92243458897755 0 6.70717131474104 4.50687427250797 4.617 0 0 cat,chimp,dog,elephant,horse,human,macaque,marmoset,orangutan,rabbit, lincRNA lincRNA A549@0.0939545,AG04450@0,BJ@0,GM12878@0.356851,H1HESC@0,HELAS3@0.005735,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0.005712,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0.011517, 0 0 0 0 ENSG00000254119.1 ENST00000519766.1 chr8:62747515-62852093 3 354 104220 intergenic -4.78 0 0,0,0 0 0,0,0 0 1.67960084436768 0 36.4971751412429 3.03096334676646 0 60.6525423728814 6.34880061408559 4.617 0 0 cat,chimp,cow,dog,elephant,guinea_pig,horse,human,macaque,marmoset,mouse,orangutan,panda,pig,rabbit,rat, lincRNA lincRNA A549@0.0939545,AG04450@0,BJ@0,GM12878@0.356851,H1HESC@0,HELAS3@0.005735,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0.005712,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0.011517, 0 0 0 0 ENSG00000254119.1 ENST00000523728.1 chr8:62765212-62798118 2 396 32508 intergenic -3.15 0 0,0,0 0 0,0,0 0 0 0 0 2.67251138181371 0 0 3.69447520610311 0 0 0 chimp,human,macaque,marmoset,orangutan,rabbit, lincRNA lincRNA A549@0.0939545,AG04450@0,BJ@0,GM12878@0.356851,H1HESC@0,HELAS3@0.005735,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0.005712,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0.011517, 0 0 0 0 ENSG00000254119.1 ENST00000521501.1 chr8:62765213-62774599 2 392 8992 intergenic 0 0 0,0,0 0 0,0,0 0 0 0 0 0 0 0 2.73053825622776 0 0 1 chimp,human,macaque,orangutan, lincRNA lincRNA A549@0.0939545,AG04450@0,BJ@0,GM12878@0.356851,H1HESC@0,HELAS3@0.005735,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0.005712,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0.011517, 0 0 0 0 ENSG00000254119.1 ENST00000519990.1 chr8:62791441-62798121 2 1171 5507 intergenic -9.35 0 0,0,0 0 0,0,0 0 0 0 16.6994022203245 0.879789358997639 28.342 19.3151152860803 0.914290902487743 23.498 0 0 cat,chimp,cow,dog,elephant,horse,human,macaque,marmoset,mouse,opossum,orangutan,panda,pig,rabbit,rat, lincRNA lincRNA A549@0.0939545,AG04450@0,BJ@0,GM12878@0.356851,H1HESC@0,HELAS3@0.005735,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0.005712,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0.011517, 0 0 0 0 ENSG00000254120.1 ENST00000519215.1 chr8:62802398-62806765 4 403 3958 intergenic 2.03 0 0,0,1 0 0,0,0 0 0 0 4.15136476426799 7.23420919656392 0 6.3424317617866 8.26629610914603 0 0 0 chimp,cow,dog,elephant,horse,human,macaque,marmoset,opossum,panda, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000254050.1 ENST00000518078.1 chr8:63385776-63386828 2 511 539 intronic 0 0 0,0,0 0 0,0,0 111.455968688845 129.34693877551 0 167.348336594912 123.961038961039 0 161.133072407045 99.0575139146568 2.43 0 0 chimp,cow,dog,elephant,horse,human,macaque,marmoset,orangutan,panda,pig,rabbit, antisense antisense A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000240915.2 ENST00000524309.1 chr8:63925627-63927240 2 548 1063 intergenic -0.55 0 0,0,1 0 0,0,0 0 0 0 0 0 0 0 0 0 0 0 chimp,elephant,human,macaque,marmoset,orangutan, antisense antisense A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 2 44 0 0 ENSG00000253121.1 ENST00000521556.1 chr8:63936931-63937853 2 665 255 intronic -2.36 0 0,0,1 0 0,0,0 0 0 13.392 0.766917293233083 0 49.945 0 0 58.196 0 0 chimp,cow,dog,elephant,guinea_pig,horse,human,macaque,marmoset,orangutan,pig,rabbit, antisense antisense A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0.008007,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000185728.11 ENST00000521674.1 chr8:64081112-64125344 5 5157 39067 intergenic 0.93 1 1,1,1 1 0,1,1 672.658134574365 15.0419791640003 34.928 677.501648245104 14.9235416080068 17.669 691.747527632344 15.6648322113293 17.507 0 0 cat,chimp,cow,dog,elephant,guinea_pig,human,macaque,marmoset,mouse,opossum,orangutan,panda,rabbit,rat, lincRNA lincRNA A549@20.5266,AG04450@26.194,BJ@20.8914,GM12878@17.7794,H1HESC@31.2066,HELAS3@26.9028,HEPG2@13.5091,HMEC@19.6717,HSMM@31.1284,HUVEC@22.2122,K562@21.629,MCF7@20.0359,NHEK@25.1772,NHLF@25.9222,SKNSHRA@19.0508, 0 0 0 0 ENSG00000185728.11 ENST00000522282.1 chr8:64081121-64082050 2 443 484 intergenic 0 0 0,1,0 1 0,1,1 474.690744920993 324.878099173554 40.256 392.857787810384 206.411157024793 22.682 378.483069977427 167.444214876033 22.862 0 0 cat,chimp,cow,dog,elephant,guinea_pig,human,macaque,marmoset,mouse,opossum,orangutan,panda,pig,rabbit,rat, lincRNA retained_intron A549@20.5266,AG04450@26.194,BJ@20.8914,GM12878@17.7794,H1HESC@31.2066,HELAS3@26.9028,HEPG2@13.5091,HMEC@19.6717,HSMM@31.1284,HUVEC@22.2122,K562@21.629,MCF7@20.0359,NHEK@25.1772,NHLF@25.9222,SKNSHRA@19.0508, 0 0 0 0 ENSG00000185728.11 ENST00000539294.1 chr8:64081121-64125346 5 5148 39069 intergenic 0.93 1 1,1,1 1 0,1,1 671.224941724942 15.2827305536359 40.256 674.732323232323 15.325014717551 22.682 689.542152292153 16.0348869948041 22.862 0 0 cat,chimp,cow,dog,elephant,guinea_pig,human,macaque,marmoset,mouse,opossum,orangutan,panda,rabbit,rat, lincRNA lincRNA A549@20.5266,AG04450@26.194,BJ@20.8914,GM12878@17.7794,H1HESC@31.2066,HELAS3@26.9028,HEPG2@13.5091,HMEC@19.6717,HSMM@31.1284,HUVEC@22.2122,K562@21.629,MCF7@20.0359,NHEK@25.1772,NHLF@25.9222,SKNSHRA@19.0508, 0 0 0 0 ENSG00000185728.11 ENST00000519428.1 chr8:64081180-64088259 3 673 6402 intergenic -14.85 0 0,1,0 1 0,1,1 336.60029717682 74.1279287722587 75.184 297.448736998514 83.4518900343643 55.545 285.353640416048 83.3327085285848 57.967 0 0 chimp,cow,dog,elephant,guinea_pig,human,macaque,marmoset,mouse,opossum,orangutan,panda,pig,rabbit,rat, lincRNA retained_intron A549@20.5266,AG04450@26.194,BJ@20.8914,GM12878@17.7794,H1HESC@31.2066,HELAS3@26.9028,HEPG2@13.5091,HMEC@19.6717,HSMM@31.1284,HUVEC@22.2122,K562@21.629,MCF7@20.0359,NHEK@25.1772,NHLF@25.9222,SKNSHRA@19.0508, 0 0 0 0 ENSG00000185728.11 ENST00000542911.1 chr8:64081202-64123304 6 2898 39194 intergenic 0.93 0 1,1,1 1 0,1,1 742.520703933747 17.7279940807266 88.208 756.01828847481 17.4320814410369 65.064 790.812284334024 18.7743532173292 68.152 0 0 cat,chimp,cow,dog,elephant,guinea_pig,human,macaque,marmoset,mouse,opossum,orangutan,panda,platypus,rabbit,rat, lincRNA lincRNA A549@20.5266,AG04450@26.194,BJ@20.8914,GM12878@17.7794,H1HESC@31.2066,HELAS3@26.9028,HEPG2@13.5091,HMEC@19.6717,HSMM@31.1284,HUVEC@22.2122,K562@21.629,MCF7@20.0359,NHEK@25.1772,NHLF@25.9222,SKNSHRA@19.0508, 0 0 0 0 ENSG00000185728.11 ENST00000523455.1 chr8:64081211-64099121 4 767 17137 intergenic -1.57 0 1,1,1 1 0,1,1 671.452411994785 29.3837311081286 93.536 686.916558018253 33.3252611308864 69.393 676.509778357236 33.1066114255704 72.787 0 0 chimp,cow,dog,elephant,guinea_pig,human,macaque,marmoset,mouse,opossum,panda,rabbit,rat, lincRNA lincRNA A549@20.5266,AG04450@26.194,BJ@20.8914,GM12878@17.7794,H1HESC@31.2066,HELAS3@26.9028,HEPG2@13.5091,HMEC@19.6717,HSMM@31.1284,HUVEC@22.2122,K562@21.629,MCF7@20.0359,NHEK@25.1772,NHLF@25.9222,SKNSHRA@19.0508, 0 0 0 0 ENSG00000185728.11 ENST00000517371.1 chr8:64081213-64125003 4 3118 40666 intergenic -2.29 0 1,1,1 1 0,1,1 619.995509942271 45.1990114592043 94.72 612.489737010904 45.3466778143904 70.355 593.3194355356 49.3113165789603 73.817 0 0 cat,chimp,cow,dog,elephant,guinea_pig,horse,human,macaque,marmoset,mouse,opossum,orangutan,panda,pig,rabbit,rat, lincRNA lincRNA A549@20.5266,AG04450@26.194,BJ@20.8914,GM12878@17.7794,H1HESC@31.2066,HELAS3@26.9028,HEPG2@13.5091,HMEC@19.6717,HSMM@31.1284,HUVEC@22.2122,K562@21.629,MCF7@20.0359,NHEK@25.1772,NHLF@25.9222,SKNSHRA@19.0508, 0 0 0 0 ENSG00000185728.11 ENST00000524135.1 chr8:64081214-64125344 6 5085 39035 intergenic 0.93 1 1,1,1 1 0,1,1 670.307571288102 15.054310234405 95.312 676.653883972468 14.9357755860126 70.836 690.382890855457 15.6776738824132 74.332 0 0 cat,chimp,cow,dog,elephant,guinea_pig,human,macaque,marmoset,mouse,opossum,orangutan,panda,rabbit,rat, lincRNA lincRNA A549@20.5266,AG04450@26.194,BJ@20.8914,GM12878@17.7794,H1HESC@31.2066,HELAS3@26.9028,HEPG2@13.5091,HMEC@19.6717,HSMM@31.1284,HUVEC@22.2122,K562@21.629,MCF7@20.0359,NHEK@25.1772,NHLF@25.9222,SKNSHRA@19.0508, 0 0 0 0 ENSG00000185728.11 ENST00000518763.1 chr8:64081220-64098755 5 543 16984 intergenic -0.87 0 0,1,0 1 0,1,1 566.359116022099 24.6324776260009 98.864 585.878453038674 27.2379298162977 73.722 561.388581952118 27.043629298163 77.422 0 0 cat,chimp,cow,dog,elephant,guinea_pig,horse,human,macaque,marmoset,mouse,opossum,orangutan,panda,pig,platypus,rabbit,rat, lincRNA lincRNA A549@20.5266,AG04450@26.194,BJ@20.8914,GM12878@17.7794,H1HESC@31.2066,HELAS3@26.9028,HEPG2@13.5091,HMEC@19.6717,HSMM@31.1284,HUVEC@22.2122,K562@21.629,MCF7@20.0359,NHEK@25.1772,NHLF@25.9222,SKNSHRA@19.0508, 0 0 0 0 ENSG00000185728.11 ENST00000518438.1 chr8:64081246-64099057 3 589 17218 intergenic -1.57 0 1,1,1 1 0,1,1 693.327674023769 31.3812870252062 114.256 688.018675721562 36.165175978627 86.228 674.668930390492 36.1733650830526 83.602 0 0 cat,chimp,cow,dog,elephant,guinea_pig,human,macaque,marmoset,opossum,panda,rabbit, lincRNA lincRNA A549@20.5266,AG04450@26.194,BJ@20.8914,GM12878@17.7794,H1HESC@31.2066,HELAS3@26.9028,HEPG2@13.5091,HMEC@19.6717,HSMM@31.1284,HUVEC@22.2122,K562@21.629,MCF7@20.0359,NHEK@25.1772,NHLF@25.9222,SKNSHRA@19.0508, 0 0 0 0 ENSG00000185728.11 ENST00000517375.1 chr8:64081520-64098819 5 414 16877 intergenic 0 0 0,1,1 1 0,1,1 587.74154589372 21.0353735853528 276.464 717.997584541063 23.1438051786455 220.886 667.905797101449 23.6353024826687 212.857 0 0 chimp,cow,dog,elephant,guinea_pig,horse,human,macaque,marmoset,mouse,opossum,orangutan,panda,pig,platypus,rabbit,rat, lincRNA lincRNA A549@20.5266,AG04450@26.194,BJ@20.8914,GM12878@17.7794,H1HESC@31.2066,HELAS3@26.9028,HEPG2@13.5091,HMEC@19.6717,HSMM@31.1284,HUVEC@22.2122,K562@21.629,MCF7@20.0359,NHEK@25.1772,NHLF@25.9222,SKNSHRA@19.0508, 0 0 0 0 ENSG00000185728.11 ENST00000521547.1 chr8:64081562-64099029 4 540 16921 intergenic -1.57 0 0,1,1 1 0,1,1 585.437037037037 25.0146563441877 301.328 653.414814814815 28.8130725134448 249.152 647.568518518519 29.2909402517582 232.327 0 0 cat,chimp,cow,dog,elephant,guinea_pig,horse,human,macaque,marmoset,mouse,opossum,orangutan,panda,platypus,rabbit,rat, lincRNA lincRNA A549@20.5266,AG04450@26.194,BJ@20.8914,GM12878@17.7794,H1HESC@31.2066,HELAS3@26.9028,HEPG2@13.5091,HMEC@19.6717,HSMM@31.1284,HUVEC@22.2122,K562@21.629,MCF7@20.0359,NHEK@25.1772,NHLF@25.9222,SKNSHRA@19.0508, 0 0 0 0 ENSG00000185728.11 ENST00000339066.7 chr8:64081562-64122725 5 2298 38857 intergenic 0.93 0 1,1,1 1 0,1,1 732.229765013055 13.127441645006 301.328 751.983028720627 12.9523895308439 249.152 815.971714534377 14.0096250353862 232.327 0 0 cat,chimp,cow,dog,elephant,guinea_pig,horse,human,macaque,marmoset,mouse,opossum,orangutan,panda,platypus,rabbit,rat, lincRNA lincRNA A549@20.5266,AG04450@26.194,BJ@20.8914,GM12878@17.7794,H1HESC@31.2066,HELAS3@26.9028,HEPG2@13.5091,HMEC@19.6717,HSMM@31.1284,HUVEC@22.2122,K562@21.629,MCF7@20.0359,NHEK@25.1772,NHLF@25.9222,SKNSHRA@19.0508, 0 0 0 0 ENSG00000185728.11 ENST00000520640.1 chr8:64081562-64122725 5 2290 38865 intergenic 0.93 0 1,1,1 1 0,1,1 734.52576419214 13.1401775376303 301.328 754.170742358079 12.975607873408 249.152 818.323580786026 14.0361250482439 232.327 0 0 cat,chimp,cow,dog,elephant,guinea_pig,horse,human,macaque,marmoset,mouse,opossum,orangutan,panda,platypus,rabbit,rat, lincRNA lincRNA A549@20.5266,AG04450@26.194,BJ@20.8914,GM12878@17.7794,H1HESC@31.2066,HELAS3@26.9028,HEPG2@13.5091,HMEC@19.6717,HSMM@31.1284,HUVEC@22.2122,K562@21.629,MCF7@20.0359,NHEK@25.1772,NHLF@25.9222,SKNSHRA@19.0508, 0 0 0 0 ENSG00000185728.11 ENST00000523056.1 chr8:64081579-64098918 5 557 16774 intergenic -1.57 0 0,1,1 1 0,1,1 539.703770197487 20.3175152020985 311.392 635.45960502693 22.82592106832 257.183 626.466786355476 23.351794443782 237.047 0 0 chimp,cow,dog,elephant,guinea_pig,horse,human,macaque,marmoset,mouse,opossum,orangutan,panda,pig,platypus,rabbit,rat, lincRNA lincRNA A549@20.5266,AG04450@26.194,BJ@20.8914,GM12878@17.7794,H1HESC@31.2066,HELAS3@26.9028,HEPG2@13.5091,HMEC@19.6717,HSMM@31.1284,HUVEC@22.2122,K562@21.629,MCF7@20.0359,NHEK@25.1772,NHLF@25.9222,SKNSHRA@19.0508, 0 0 0 0 ENSG00000185728.11 ENST00000434924.2 chr8:64081581-64122271 6 1962 38718 intergenic -1.57 0 0,1,1 1 0,1,1 711.526503567788 11.2883413399452 312.576 729.737003058104 10.7015341701534 257.811 802.30377166157 11.7498837749884 237.047 0 0 cat,chimp,cow,dog,elephant,guinea_pig,horse,human,macaque,marmoset,mouse,opossum,orangutan,panda,platypus,rabbit,rat, lincRNA lincRNA A549@20.5266,AG04450@26.194,BJ@20.8914,GM12878@17.7794,H1HESC@31.2066,HELAS3@26.9028,HEPG2@13.5091,HMEC@19.6717,HSMM@31.1284,HUVEC@22.2122,K562@21.629,MCF7@20.0359,NHEK@25.1772,NHLF@25.9222,SKNSHRA@19.0508, 0 0 0 0 ENSG00000185728.11 ENST00000517303.1 chr8:64081581-64122663 6 2356 38716 intergenic 0.93 0 1,1,1 1 0,1,1 723.824702886248 11.0452009505114 312.576 751.978353140917 10.2961824568654 257.811 815.251273344652 11.376252712057 237.047 0 0 cat,chimp,cow,dog,elephant,guinea_pig,horse,human,macaque,marmoset,mouse,opossum,orangutan,panda,platypus,rabbit,rat, lincRNA lincRNA A549@20.5266,AG04450@26.194,BJ@20.8914,GM12878@17.7794,H1HESC@31.2066,HELAS3@26.9028,HEPG2@13.5091,HMEC@19.6717,HSMM@31.1284,HUVEC@22.2122,K562@21.629,MCF7@20.0359,NHEK@25.1772,NHLF@25.9222,SKNSHRA@19.0508, 0 0 0 0 ENSG00000185728.11 ENST00000518373.1 chr8:64100088-64101600 2 522 988 intergenic -5.28 0 0,1,1 0 0,1,1 322.088122605364 39.5748987854251 782 276.95785440613 3.42105263157895 789.956 360.392720306513 18.4008097165992 883.28 1 1 chimp,human,macaque,marmoset,orangutan, lincRNA lincRNA A549@20.5266,AG04450@26.194,BJ@20.8914,GM12878@17.7794,H1HESC@31.2066,HELAS3@26.9028,HEPG2@13.5091,HMEC@19.6717,HSMM@31.1284,HUVEC@22.2122,K562@21.629,MCF7@20.0359,NHEK@25.1772,NHLF@25.9222,SKNSHRA@19.0508, 1 96 0 0 ENSG00000253205.1 ENST00000521221.1 chr8:64297397-64330488 4 1758 31327 intergenic 3.45 0 0,0,0 0 0,0,0 0 46.6685606665177 0 1.19681456200228 37.3955373958566 0 2.20534698521047 37.1760781434545 0 0 0 chimp,horse,human,macaque,marmoset,orangutan, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0.0025875,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000253205.1 ENST00000519819.1 chr8:64298167-64374108 3 429 75508 intergenic 1.76 0 0,1,0 0 0,0,0 0 30.35968374212 0 0 26.6276685914075 0 0 28.8696959262595 2.43 0 0 cat,chimp,dog,human,macaque,marmoset,orangutan,panda,pig,rabbit, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0.0025875,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000253205.1 ENST00000517829.1 chr8:64298421-64329913 4 496 30990 intergenic 3.45 0 0,0,0 0 0,0,0 0 47.1760567925137 0 0 37.8021942562117 0 0 37.580348499516 0 0 0 cat,chimp,dog,horse,human,macaque,marmoset,orangutan, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0.0025875,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000253205.1 ENST00000522265.1 chr8:64326191-64382757 4 558 56002 intergenic -3.16 0 0,0,1 0 0,0,0 138.387096774194 22.2230634620192 18.035 64.3082437275986 19.5838898610764 26.853 118.161290322581 23.5323917002964 67.843 0 0 chimp,horse,human,macaque,marmoset,opossum,orangutan,panda,platypus,rabbit, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0.0025875,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000253205.1 ENST00000521061.1 chr8:64345444-64382763 4 537 36776 intergenic 0.15 0 0,0,0 0 0,0,0 145.106145251397 27.2134816184468 15.929 70.0018621973929 23.974684576898 24.297 129.441340782123 29.6544213617577 64.267 0 0 chimp,human,macaque,marmoset,orangutan,platypus, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0.0025875,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000253894.1 ENST00000518739.1 chr8:64378407-64388040 4 3218 6409 intergenic 4.78 1 0,0,0 0 0,0,0 20.4950279676818 16.6699953190825 0 10.4077066500932 11.525667030738 11.013 12.0229956494717 21.8742393509128 13.496 0 0 cat,chimp,dog,human,macaque,marmoset,pig, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0.0065915,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0.001277,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000253205.1 ENST00000522086.1 chr8:64378783-64382682 2 415 3482 intergenic -0.82 0 0,0,0 0 0,0,0 119.255421686747 22.57007466973 44.36 29.2819277108434 12.1777713957496 47.402 79.2530120481928 11.1114302125215 97.135 0 0 chimp,elephant,guinea_pig,human,macaque,marmoset,opossum,orangutan,panda,platypus, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0.0025875,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000253894.1 ENST00000522740.1 chr8:64382843-64385206 3 450 1909 intergenic -2.87 1 0,0,0 0 0,0,0 0 3.01204819277108 139.266 1.7 3.32372970141435 74.865 20.82 5.53954950235726 127.334 0 0 chimp,horse,human,macaque,marmoset,orangutan, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0.0065915,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0.001277,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000253894.1 ENST00000517899.1 chr8:64382886-64385202 2 605 1709 intergenic -3.57 1 0,0,0 0 0,0,0 0 3.36454066705676 139.266 2.76528925619835 2.73376243417203 75.885 7.45950413223141 5.33469865418373 133.944 0 0 chimp,dog,guinea_pig,horse,human,macaque,marmoset,orangutan,panda,pig, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0.0065915,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0.001277,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000253583.1 ENST00000523265.1 chr8:64498558-64501966 3 727 2677 intergenic -1.49 1 0,1,1 0 0,0,0 0 0 79.356 9.11966987620358 0 34.026 3.7414030261348 0 32.089 0 0 chimp,human,macaque,marmoset,mouse,orangutan,panda,rat, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0.084476,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000253554.1 ENST00000523191.1 chr8:64599737-65281115 6 567 680801 intergenic 3.72 0 0,0,0 0 0,0,0 197.864197530864 30.6032761408987 362.891 275.776014109347 33.4969998575209 361.51 278.035273368607 34.6702839743186 365.321 0 0 cat,chimp,cow,dog,elephant,guinea_pig,horse,human,macaque,marmoset,mouse,opossum,orangutan,platypus,rabbit,rat, antisense antisense A549@0.012321,AG04450@0,BJ@0,GM12878@0,H1HESC@0.0144815,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0.007147,NHEK@0,NHLF@0,SKNSHRA@0.0184205, 0 0 0 0 ENSG00000253762.1 ENST00000522857.1 chr8:64617314-64664235 4 562 46353 intergenic -2.70 0 0,0,1 0 0,0,0 106.110320284698 35.4798610661662 468.96 114.884341637011 28.9845101719414 440.835 114.994661921708 30.7427566716286 433.351 0 0 cat,chimp,dog,guinea_pig,horse,human,macaque,orangutan, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0.005142,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000253554.1 ENST00000524360.1 chr8:64641332-65153063 6 575 511146 intergenic -0.95 0 0,0,0 0 0,0,0 0 28.1368043572678 0 5.91130434782609 29.2260234844839 0 6.06434782608696 30.2990026332985 0 1 1 chimp,human,macaque,marmoset,orangutan, antisense antisense A549@0.012321,AG04450@0,BJ@0,GM12878@0,H1HESC@0.0144815,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0.007147,NHEK@0,NHLF@0,SKNSHRA@0.0184205, 0 0 0 0 ENSG00000253734.1 ENST00000519550.1 chr8:64681988-64698058 3 3709 12357 intergenic 3.24 1 0,0,0 0 0,0,0 8.38015637638177 18.9589706239378 11.233 4.89215421946616 28.8024601440479 0 5.3078997034241 27.6292789512017 0 0 0 chimp,human,macaque,orangutan,pig, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0.0014305,H1HESC@0.004902,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0.0022155,NHEK@0.00385933,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000253554.1 ENST00000521958.1 chr8:64769500-65281115 5 574 511033 intergenic 8.74 0 0,0,0 0 0,0,0 203.825783972125 27.8200409758274 362.891 279.898954703833 32.8190390835817 361.51 282.712543554007 34.5877154704295 365.321 0 0 chimp,cow,dog,elephant,guinea_pig,horse,human,macaque,marmoset,mouse,opossum,orangutan,pig,platypus,rabbit,rat, antisense antisense A549@0.012321,AG04450@0,BJ@0,GM12878@0,H1HESC@0.0144815,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0.007147,NHEK@0,NHLF@0,SKNSHRA@0.0184205, 0 0 0 0 ENSG00000253554.1 ENST00000520365.1 chr8:65063663-65152839 3 566 88606 intergenic -3.36 0 0,0,0 0 0,0,0 0 25.6469990745548 0 0 30.4082229194411 0 0 32.5433379229397 0 0 1 chimp,human,macaque,orangutan, antisense antisense A549@0.012321,AG04450@0,BJ@0,GM12878@0,H1HESC@0.0144815,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0.007147,NHEK@0,NHLF@0,SKNSHRA@0.0184205, 0 0 0 0 ENSG00000254102.1 ENST00000520834.1 chr8:65486863-65489820 2 2702 253 intergenic 1.99 0 0,0,0 0 0,0,0 20.7982975573649 4.72332015810277 69.642 41.8626943005181 1.18577075098814 104.586 41.3319763138416 1.04743083003953 118.496 0 0 chimp,elephant,human,macaque,orangutan,pig, lincRNA processed_transcript A549@0,AG04450@0,BJ@0,GM12878@0.226048,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0.000944333,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000254102.1 ENST00000517909.1 chr8:65486868-65494445 2 2487 5088 exonic 1.99 1 0,0,0 0 0,0,0 63.2677925211098 309.824488993711 623.904 86.0221149979895 330.142885220126 489.645 98.8154402895054 341.03891509434 483.194 0 0 chimp,elephant,horse,human,macaque,marmoset,orangutan,pig, lincRNA processed_transcript A549@0,AG04450@0,BJ@0,GM12878@0.226048,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0.000944333,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000254330.1 ENST00000519680.1 chr8:65616331-65647016 5 764 29913 intronic 2.49 0 0,0,0 0 0,0,0 79.1151832460733 42.0221977066827 0 135.69109947644 52.0893591415104 0 136.667539267016 51.6185939223749 0 0 0 chimp,guinea_pig,horse,human,macaque,marmoset,orangutan,panda,pig, sense_intronic sense_intronic A549@0,AG04450@0,BJ@0,GM12878@0.129543,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000254006.1 ENST00000522106.1 chr8:65713793-65730130 5 870 15459 intergenic 3.17 0 0,1,0 0 0,0,0 0 11.0402354615434 0 0 12.4506759816288 3.419 0 15.9837635034608 3.536 1 1 chimp,human,macaque,marmoset,orangutan, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0.14191,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0.00150867,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000254006.1 ENST00000523769.1 chr8:65713915-65718257 3 396 3942 intergenic 0 0 0,0,0 0 0,0,0 0 43.2955352612887 0 0 22.3269913749366 0 0 24.3214104515474 0 0 0 chimp,human,macaque,marmoset,orangutan,pig, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0.14191,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0.00150867,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000246145.1 ENST00000499642.1 chr8:67331824-67341212 3 4363 5021 intergenic -0.13 0 0,1,0 0 0,0,1 1.73962869585148 4.24835690101573 450.756 8.42493696997479 4.99342760406294 446.501 10.5576438230575 17.4672376020713 444.196 1 1 chimp,human,macaque,marmoset,orangutan, lincRNA processed_transcript A549@0.072787,AG04450@0.13882,BJ@0.0664115,GM12878@0.16493,H1HESC@0.0843675,HELAS3@0.152715,HEPG2@0.0657895,HMEC@0.004689,HSMM@0.0232955,HUVEC@0.028869,K562@0.039634,MCF7@0.067484,NHEK@0.0345787,NHLF@0.0138045,SKNSHRA@0.121613, 0 0 0 0 ENSG00000245910.2 ENST00000520348.1 chr8:67833919-67837776 3 645 3208 exonic 0.56 0 1,1,1 1 0,0,0 0 10.0985037406484 0 5.83255813953488 23.8391521197007 6.037 7.97519379844961 23.1097256857855 6.46 0 0 chimp,cow,dog,elephant,guinea_pig,horse,human,macaque,marmoset,orangutan,panda,rabbit, lincRNA non_coding A549@44.3505,AG04450@20.0665,BJ@17.139,GM12878@37.5337,H1HESC@14.5783,HELAS3@48.5567,HEPG2@17.1574,HMEC@9.388,HSMM@14.0059,HUVEC@8.00278,K562@50.1161,MCF7@40.0352,NHEK@17.4217,NHLF@17.4573,SKNSHRA@18.6327, 0 0 0 0 ENSG00000245910.2 ENST00000520944.1 chr8:67834053-67837831 4 634 3138 exonic 1.91 0 0,1,0 1 0,0,0 0 10.3237731038878 0 17.4022082018927 23.2842574888464 344.578 15.698738170347 23.6252390057361 341.554 0 0 chimp,cow,dog,elephant,guinea_pig,horse,human,macaque,marmoset,orangutan,panda,pig,rabbit,rat, lincRNA non_coding A549@44.3505,AG04450@20.0665,BJ@17.139,GM12878@37.5337,H1HESC@14.5783,HELAS3@48.5567,HEPG2@17.1574,HMEC@9.388,HSMM@14.0059,HUVEC@8.00278,K562@50.1161,MCF7@40.0352,NHEK@17.4217,NHLF@17.4573,SKNSHRA@18.6327, 0 0 0 0 ENSG00000245910.2 ENST00000499996.1 chr8:67834165-67837777 4 468 3138 exonic 0.56 0 1,1,1 1 0,0,0 0 10.3237731038878 0 14.7799145299145 23.2842574888464 6.037 11.5106837606838 23.6252390057361 6.217 0 0 cat,chimp,cow,dog,elephant,guinea_pig,horse,human,macaque,marmoset,mouse,orangutan,panda,pig,rabbit,rat, lincRNA non_coding A549@44.3505,AG04450@20.0665,BJ@17.139,GM12878@37.5337,H1HESC@14.5783,HELAS3@48.5567,HEPG2@17.1574,HMEC@9.388,HSMM@14.0059,HUVEC@8.00278,K562@50.1161,MCF7@40.0352,NHEK@17.4217,NHLF@17.4573,SKNSHRA@18.6327, 0 0 0 0 ENSG00000245910.2 ENST00000521399.1 chr8:67834222-67837776 3 299 3251 exonic 1.23 1 1,1,1 1 0,0,0 0 9.96493386650261 0 23.133779264214 22.474930790526 6.037 17.2040133779264 22.8040602891418 6.46 0 0 chimp,dog,elephant,horse,human,macaque,marmoset,orangutan,panda,rabbit, lincRNA non_coding A549@44.3505,AG04450@20.0665,BJ@17.139,GM12878@37.5337,H1HESC@14.5783,HELAS3@48.5567,HEPG2@17.1574,HMEC@9.388,HSMM@14.0059,HUVEC@8.00278,K562@50.1161,MCF7@40.0352,NHEK@17.4217,NHLF@17.4573,SKNSHRA@18.6327, 0 0 0 0 ENSG00000245910.2 ENST00000502076.2 chr8:67834230-67837776 2 2576 968 exonic 8.02 1 1,1,1 1 0,0,0 0 33.4669421487603 0 8.2457298136646 60.9400826446281 6.037 8.96467391304348 58.029958677686 6.46 0 1 chimp,human,orangutan, lincRNA non_coding A549@44.3505,AG04450@20.0665,BJ@17.139,GM12878@37.5337,H1HESC@14.5783,HELAS3@48.5567,HEPG2@17.1574,HMEC@9.388,HSMM@14.0059,HUVEC@8.00278,K562@50.1161,MCF7@40.0352,NHEK@17.4217,NHLF@17.4573,SKNSHRA@18.6327, 0 0 0 0 ENSG00000245910.2 ENST00000520619.1 chr8:67834253-67838633 4 475 3899 exonic -5.12 1 1,1,1 1 0,0,0 0 8.30879712746858 0 14.04 20.4152346755578 0 8.25473684210526 21.1113105924596 0 0 0 cat,chimp,cow,dog,elephant,guinea_pig,horse,human,macaque,marmoset,orangutan,panda,pig,rabbit,rat, lincRNA non_coding A549@44.3505,AG04450@20.0665,BJ@17.139,GM12878@37.5337,H1HESC@14.5783,HELAS3@48.5567,HEPG2@17.1574,HMEC@9.388,HSMM@14.0059,HUVEC@8.00278,K562@50.1161,MCF7@40.0352,NHEK@17.4217,NHLF@17.4573,SKNSHRA@18.6327, 0 0 0 0 ENSG00000245910.2 ENST00000521127.1 chr8:67834506-67837776 2 558 2710 intergenic 0.56 0 0,1,0 1 0,0,0 58.0573476702509 0 0 97.2974910394265 7.92472324723247 6.037 93.4032258064516 8.2169741697417 6.46 0 0 cat,chimp,cow,dog,elephant,guinea_pig,horse,human,macaque,marmoset,mouse,orangutan,pig,rabbit,rat, lincRNA processed_transcript A549@44.3505,AG04450@20.0665,BJ@17.139,GM12878@37.5337,H1HESC@14.5783,HELAS3@48.5567,HEPG2@17.1574,HMEC@9.388,HSMM@14.0059,HUVEC@8.00278,K562@50.1161,MCF7@40.0352,NHEK@17.4217,NHLF@17.4573,SKNSHRA@18.6327, 0 0 0 0 ENSG00000245424.1 ENST00000501209.1 chr8:68256069-68404082 5 1571 146434 intronic 5.53 0 0,1,0 0 0,0,0 0 8.47033475832115 150 65.1788669637174 10.8795703183687 240.825 49.1317632081477 18.4338678175834 214.87 0 0 chimp,cow,elephant,guinea_pig,human,macaque,marmoset,orangutan,pig,rabbit,rat, lincRNA lincRNA A549@0.026603,AG04450@0.0204785,BJ@0.055313,GM12878@0.0353035,H1HESC@0.135051,HELAS3@0.0414585,HEPG2@0.0647945,HMEC@0.002598,HSMM@0.01376,HUVEC@0.092947,K562@0.019944,MCF7@0.0251705,NHEK@0.00329333,NHLF@0.01378,SKNSHRA@0.0969435, 0 0 0 0 ENSG00000255130.1 ENST00000526382.1 chr8:68644822-68647900 2 548 2528 intronic 5.63 0 0,0,0 0 0,0,0 0 0 0 3.25729927007299 0 0 6.93248175182482 0 0 0 0 chimp,cow,elephant,horse,human,marmoset,orangutan,pig,rabbit, antisense antisense A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0.0625305,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000255206.1 ENST00000526901.1 chr8:68994439-69007316 2 772 12103 intronic -8.40 0 0,1,1 0 0,0,0 0 15.9553829629018 0 0 23.4665785342477 0 0 27.6162108568124 0 0 0 cat,chimp,cow,dog,elephant,horse,human,macaque,marmoset,orangutan,panda,pig,rabbit, antisense antisense A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000254337.1 ENST00000522354.1 chr8:69760977-69764998 3 512 3505 intergenic -0.91 0 0,0,0 0 0,0,0 0 0 150.096 7.46484375 0.251640513552068 119.73 7.6171875 0.256776034236805 97.803 1 1 chimp,human,macaque,marmoset,orangutan, lincRNA lincRNA A549@0,AG04450@0.0265545,BJ@1.11641,GM12878@0,H1HESC@0,HELAS3@0.0178515,HEPG2@0,HMEC@0,HSMM@0.319906,HUVEC@0.0057785,K562@0,MCF7@7.76764,NHEK@0,NHLF@0.0149865,SKNSHRA@9.59828, 1 96 0 0 ENSG00000253658.1 ENST00000518540.1 chr8:69824038-70016425 5 2362 190017 intergenic 0.78 0 0,0,0 0 0,0,0 13.7171888230313 12.7800459958846 186.735 9.19432684165961 15.0489693027466 183.845 9.94792548687553 16.9708762900162 155.592 0 0 cat,chimp,cow,dog,elephant,guinea_pig,horse,human,macaque,mouse,orangutan,panda,pig,rabbit, processed_transcript processed_transcript A549@0,AG04450@0.0013625,BJ@0.012751,GM12878@0,H1HESC@0.0012555,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0.051559,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0.018781, 0 0 0 0 ENSG00000253658.1 ENST00000519062.1 chr8:69825198-69913722 3 788 87732 intergenic 0.78 0 0,0,0 0 0,0,0 0 14.3045525007979 0 0 15.8131924497333 0 0 19.0274472256417 0 0 0 cat,chimp,cow,dog,elephant,horse,human,macaque,marmoset,orangutan,panda,pig, processed_transcript processed_transcript A549@0,AG04450@0.0013625,BJ@0.012751,GM12878@0,H1HESC@0.0012555,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0.051559,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0.018781, 0 0 0 0 ENSG00000253658.1 ENST00000524286.1 chr8:69825398-69913747 4 717 87626 intergenic 0.78 0 0,0,0 0 0,0,0 0 14.3218565266017 0 0 15.8323214571018 0 0 19.0504644740146 0 0 0 cat,chimp,cow,dog,horse,human,macaque,marmoset,orangutan,panda, processed_transcript processed_transcript A549@0,AG04450@0.0013625,BJ@0.012751,GM12878@0,H1HESC@0.0012555,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0.051559,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0.018781, 0 0 0 0 ENSG00000253658.1 ENST00000517925.1 chr8:69836638-69871884 2 435 34809 intergenic 0.78 0 0,0,0 0 0,0,0 0 0.734522680915855 92.612 0 4.4352609957195 130.367 0 9.67580223505415 118.623 0 0 cat,chimp,dog,elephant,horse,human,macaque,marmoset,orangutan,panda,pig, processed_transcript processed_transcript A549@0,AG04450@0.0013625,BJ@0.012751,GM12878@0,H1HESC@0.0012555,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0.051559,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0.018781, 0 0 0 0 ENSG00000253373.1 ENST00000520780.1 chr8:70087814-70090424 3 450 2156 intergenic 0.48 1 0,1,0 0 0,0,0 0 9.41233766233766 138.57 12.5 0 189.197 30.4244444444444 0.61456400742115 170.742 0 0 chimp,cow,human,macaque,orangutan, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0.264683,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0.098912,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0.040843, 0 0 0 0 ENSG00000253479.1 ENST00000517343.1 chr8:70337270-70360195 3 1131 21790 intergenic 3.82 0 0,0,0 0 0,0,0 0 3.38701239100505 284.307 10.789566755084 3.05447452960073 409.978 12.1388152077807 10.2687471317118 314.655 0 0 cat,chimp,cow,dog,elephant,guinea_pig,horse,human,macaque,marmoset,mouse,orangutan,pig,rat, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0.004122,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0.059551,NHEK@0,NHLF@0.003422,SKNSHRA@0, 0 0 0 0 ENSG00000253479.1 ENST00000519557.1 chr8:70337857-70360479 4 708 21908 intergenic 3.82 0 0,0,0 0 0,0,0 0 3.36876939930619 284.307 17.1751412429379 3.18207960562352 406.865 17.5127118644068 10.328008033595 314.132 0 0 cat,chimp,cow,dog,elephant,guinea_pig,horse,human,macaque,opossum,orangutan,panda,pig, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0.004122,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0.059551,NHEK@0,NHLF@0.003422,SKNSHRA@0, 0 0 0 0 ENSG00000254557.1 ENST00000533344.1 chr8:70625625-70631957 3 549 5779 intronic 1.31 0 0,0,1 0 0,0,0 47.344262295082 6.02232220107285 12.98 17.0418943533698 6.31614466170618 0 20.735883424408 8.71604083751514 0 0 0 chimp,dog,horse,human,macaque,marmoset,orangutan,panda, antisense antisense A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000246528.2 ENST00000501104.2 chr8:70746346-70749605 2 826 2431 intronic 0.39 0 0,1,0 1 0,0,0 0 43.8963389551625 159.688 9.07384987893462 40.6770876182641 179.045 10.6222760290557 33.8930481283422 190.447 0 0 cat,chimp,dog,guinea_pig,horse,human,macaque,marmoset,orangutan,panda, lincRNA processed_transcript A549@0.0153085,AG04450@0,BJ@0.0067085,GM12878@1.8398,H1HESC@0.167768,HELAS3@0,HEPG2@0.002964,HMEC@0.005579,HSMM@0.005289,HUVEC@0,K562@0,MCF7@0.0425895,NHEK@0,NHLF@0,SKNSHRA@0.0039735, 0 0 0 0 ENSG00000246528.2 ENST00000528800.1 chr8:70746364-70749542 2 732 2444 intronic 0.39 0 0,1,0 1 0,0,0 0 43.6628477905074 159.688 5.81284153005464 40.4607201309329 182.555 10.3265027322404 33.7127659574468 191.176 0 0 cat,chimp,dog,guinea_pig,horse,human,macaque,marmoset,orangutan,panda,rat, lincRNA processed_transcript A549@0.0153085,AG04450@0,BJ@0.0067085,GM12878@1.8398,H1HESC@0.167768,HELAS3@0,HEPG2@0.002964,HMEC@0.005579,HSMM@0.005289,HUVEC@0,K562@0,MCF7@0.0425895,NHEK@0,NHLF@0,SKNSHRA@0.0039735, 0 0 0 0 ENSG00000246528.2 ENST00000533300.1 chr8:70746388-70762652 3 428 15832 intronic 0 0 0,1,0 1 0,0,0 0 6.74027286508337 159.688 0 6.76686457806973 182.555 2.74532710280374 5.97631379484588 191.176 0 0 chimp,dog,human,macaque,marmoset,orangutan, lincRNA processed_transcript A549@0.0153085,AG04450@0,BJ@0.0067085,GM12878@1.8398,H1HESC@0.167768,HELAS3@0,HEPG2@0.002964,HMEC@0.005579,HSMM@0.005289,HUVEC@0,K562@0,MCF7@0.0425895,NHEK@0,NHLF@0,SKNSHRA@0.0039735, 0 0 0 0 ENSG00000246528.2 ENST00000530194.1 chr8:70755534-70767206 3 569 11099 intergenic -11.48 0 0,1,0 0 0,0,0 0 0 0 7.40949033391916 0 0 7.49912126537786 0.105865393278674 0 0 1 chimp,human,macaque,orangutan, lincRNA processed_transcript A549@0.0153085,AG04450@0,BJ@0.0067085,GM12878@1.8398,H1HESC@0.167768,HELAS3@0,HEPG2@0.002964,HMEC@0.005579,HSMM@0.005289,HUVEC@0,K562@0,MCF7@0.0425895,NHEK@0,NHLF@0,SKNSHRA@0.0039735, 0 0 0 0 ENSG00000253143.1 ENST00000521051.1 chr8:71383347-71392858 2 734 8775 intergenic -3.12 0 0,0,1 0 0,0,0 0 20.1802849002849 0 0 21.6418233618234 5.853 0 26.9394871794872 6.128 0 1 chimp,human,macaque,orangutan, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000253967.1 ENST00000520259.1 chr8:71383369-71397922 4 2363 12184 intergenic 1.54 0 0,1,1 0 0,0,0 0 20.0210932370322 26.288 2.41853575962759 25.6299244911359 6.405 2.47778247989843 29.5075508864084 6.573 0 1 chimp,human,marmoset,orangutan, lincRNA lincRNA A549@0,AG04450@0.003884,BJ@0.0051295,GM12878@0,H1HESC@0.103956,HELAS3@0.0022425,HEPG2@0.0018005,HMEC@0,HSMM@0.0126455,HUVEC@0.071,K562@0.003924,MCF7@0,NHEK@0,NHLF@0.0114765,SKNSHRA@0, 0 0 0 0 ENSG00000254031.1 ENST00000521685.1 chr8:72067692-72116458 6 679 48077 exonic 0.11 0 0,0,0 0 0,0,0 138.564064801178 47.692472492044 0 74.6067746686303 54.5027559955904 0 97.3681885125184 55.2037356740229 0 0 0 cat,chimp,dog,elephant,horse,human,macaque,marmoset,orangutan,panda,pig,rabbit,rat, antisense antisense A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0.003312, 0 0 0 0 ENSG00000254031.1 ENST00000521084.1 chr8:72067757-72074807 3 390 6656 intergenic 3.59 0 0,0,0 0 0,0,0 0 39.4326923076923 0 4.45128205128205 68.7445913461538 0 3.32051282051282 66.8405949519231 0 0 0 chimp,elephant,human,macaque,marmoset,orangutan,panda, antisense antisense A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0.003312, 0 0 0 0 ENSG00000254277.1 ENST00000519840.1 chr8:72587535-72615021 2 806 26678 intergenic 1.89 0 0,0,0 0 0,0,0 0 12.940700202414 0 2.61042183622829 18.236636929305 0 2.6302729528536 19.3149786340805 0 0 0 NA lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@44.9383,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0.0139715,K562@0,MCF7@0,NHEK@0,NHLF@0.004803,SKNSHRA@0, 0 0 0 0 ENSG00000254277.1 ENST00000521131.1 chr8:72587612-72614670 3 470 26584 intergenic 1.89 0 0,0,0 0 0,0,0 0 12.9864580198616 0 0 18.3011209750226 0 4.40851063829787 19.3053340355101 0 0 0 chimp,dog,human,orangutan,panda,pig, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@44.9383,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0.0139715,K562@0,MCF7@0,NHEK@0,NHLF@0.004803,SKNSHRA@0, 0 0 0 0 ENSG00000253287.1 ENST00000517848.1 chr8:72691840-72705110 3 716 12550 intergenic 1.00 1 0,0,1 0 0,0,0 0 21.2600796812749 0 13.1564245810056 30.3321912350598 0 16.659217877095 28.3601593625498 0 0 0 cat,chimp,dog,elephant,guinea_pig,horse,human,macaque,marmoset,orangutan,panda,pig,rabbit, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0.011215,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000253317.1 ENST00000523602.1 chr8:73108569-73114504 2 796 5137 intergenic 7.46 0 0,0,0 0 0,0,0 0 0 0 0 7.70488612030368 0 0 10.3836869768347 0 0 1 chimp,human,orangutan, lincRNA lincRNA A549@0.127349,AG04450@0.355098,BJ@0.0170775,GM12878@0.780768,H1HESC@0.058506,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0.016027,HUVEC@0,K562@0.0372335,MCF7@0,NHEK@0,NHLF@0.0121715,SKNSHRA@0.276559, 0 0 0 0 ENSG00000254347.1 ENST00000521224.1 chr8:73374546-73383207 2 250 8409 intergenic 0 0 0,0,0 0 0,0,0 0 0 0 16.2 0.324414317992627 0 48.256 0 2.916 0 0 cat,chimp,cow,dog,elephant,horse,human,macaque,marmoset,orangutan,panda,rabbit, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000253726.1 ENST00000519427.1 chr8:73644280-73664078 3 1719 18075 intronic -3.09 0 0,0,1 0 0,0,0 10.978475858057 27.6767911479945 82.706 3.01163467132054 29.3922544951591 48.498 3.17044793484584 31.6669432918396 50.028 0 0 chimp,guinea_pig,horse,human,macaque,marmoset,orangutan, sense_intronic sense_intronic A549@0,AG04450@0,BJ@0,GM12878@0.009877,H1HESC@0.079306,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0.0053785,K562@0,MCF7@0,NHEK@0,NHLF@0.002099,SKNSHRA@0, 0 0 0 0 ENSG00000253784.1 ENST00000523881.1 chr8:73787094-73793975 3 485 6392 intronic 0 0 0,0,0 0 0,0,0 0 0 74.884 0 0 86.467 0 0 74.173 0 0 chimp,guinea_pig,human,macaque,marmoset,orangutan, antisense antisense A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0.015212,HELAS3@0.010877,HEPG2@0,HMEC@0.100688,HSMM@0,HUVEC@0,K562@0.0109725,MCF7@0.207411,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000253636.1 ENST00000517664.1 chr8:73964413-73975296 2 3547 7334 intergenic -1.11 0 0,1,0 0 0,0,0 0 0 0 0 0 0 0 0 0 0 1 chimp,human,orangutan, antisense antisense A549@0.347279,AG04450@0.196152,BJ@0.221758,GM12878@0.534879,H1HESC@6.03141,HELAS3@0.518415,HEPG2@0.573106,HMEC@0.081916,HSMM@0.268183,HUVEC@0.720047,K562@0.321974,MCF7@0.584752,NHEK@0.290281,NHLF@0.24897,SKNSHRA@0.372625, 0 0 0 0 ENSG00000237061.1 ENST00000442274.1 chr8:73996022-73998114 2 478 1612 intronic 1.20 0 0,0,0 0 0,0,0 37.8598326359833 0 23.585 11.7364016736402 0.923076923076923 8.79 12.5188284518828 0.93424317617866 13.084 0 0 cat,chimp,dog,guinea_pig,horse,human,macaque,marmoset,orangutan,panda,rabbit, sense_intronic sense_intronic A549@0,AG04450@0,BJ@0.165667,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000250295.2 ENST00000520894.1 chr8:74209946-74227844 3 427 17467 intronic -1.74 0 0,0,0 0 0,0,0 244.96018735363 91.8600790061258 2.754 244.248243559719 81.9787599473293 2.104 259.583138173302 80.784851434133 6.822 0 0 cat,chimp,cow,dog,elephant,guinea_pig,horse,human,macaque,marmoset,mouse,orangutan,panda,pig,rabbit, antisense antisense A549@0.000847,AG04450@0.000722,BJ@0.0150515,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0.000821,MCF7@0.0006305,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000250295.2 ENST00000514599.1 chr8:74223141-74268696 6 3255 42290 intronic -0.67 0 0,1,0 0 0,0,0 119.723195084485 42.2909907779617 80.958 77.4178187403994 39.4723575313313 79.032 86.0018433179723 41.4484748167416 77.768 1 1 chimp,human,macaque,marmoset,orangutan, antisense antisense A549@0.000847,AG04450@0.000722,BJ@0.0150515,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0.000821,MCF7@0.0006305,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000250295.2 ENST00000517475.1 chr8:74227651-74268595 4 466 40472 intronic -0.67 1 0,0,0 0 0,0,0 44.6523605150215 37.1756275943862 80.958 22.7532188841202 35.7143457204981 72.056 41.3841201716738 38.2565971535877 70.904 0 0 cat,chimp,dog,elephant,guinea_pig,horse,human,macaque,marmoset,mouse,orangutan,pig,rabbit, antisense antisense A549@0.000847,AG04450@0.000722,BJ@0.0150515,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0.000821,MCF7@0.0006305,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000253339.1 ENST00000519134.1 chr8:74271148-74274710 2 466 3094 intergenic -1.38 0 0,0,0 0 0,0,0 88.4656652360515 0 0 75.0064377682403 0 0 75.9291845493562 0.628312863606981 0 0 0 chimp,human,macaque,orangutan,pig, lincRNA lincRNA A549@0.0507475,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0.0209055,HEPG2@0.0532675,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0.006789,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000253339.1 ENST00000518355.1 chr8:74271148-74275023 2 597 3276 intergenic 1.79 0 0,0,0 0 0,0,0 235.594639865997 0 0 204.71189279732 0 0 188.457286432161 0.593406593406593 0 0 0 cat,chimp,cow,dog,guinea_pig,horse,human,macaque,marmoset,opossum,orangutan,panda,pig,rabbit,rat, lincRNA lincRNA A549@0.0507475,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0.0209055,HEPG2@0.0532675,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0.006789,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000253235.1 ENST00000522560.1 chr8:74281005-74281530 2 341 182 intergenic 0 1 0,0,0 0 0,0,0 0 0 0 0 0 0 0 0 0 0 1 chimp,human,macaque,orangutan, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0.023525, 0 0 0 0 ENSG00000253302.1 ENST00000522703.1 chr8:74332239-74351472 2 540 18691 intergenic 1.21 0 0,1,1 0 0,0,0 238.046296296296 49.721630731368 159.701 225.637037037037 53.621529078166 184.454 190.805555555556 57.4306885666898 182.097 0 0 cat,elephant,horse,human,macaque,marmoset,mouse,opossum,orangutan,rabbit, lincRNA lincRNA A549@0.0335255,AG04450@0.0153635,BJ@0.0051705,GM12878@0,H1HESC@0,HELAS3@0.0115865,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0.0108725,NHEK@0.000938333,NHLF@0.0009295,SKNSHRA@0, 0 0 0 0 ENSG00000253302.1 ENST00000517604.1 chr8:74332309-74353761 3 2073 19375 intergenic 11.37 0 0,0,0 0 0,0,0 43.5383502170767 47.9662967741936 162.851 37.570670525808 51.7285161290323 187.197 29.3077665219489 55.4032 184.007 0 0 chimp,dog,elephant,guinea_pig,human,marmoset,orangutan, lincRNA lincRNA A549@0.0335255,AG04450@0.0153635,BJ@0.0051705,GM12878@0,H1HESC@0,HELAS3@0.0115865,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0.0108725,NHEK@0.000938333,NHLF@0.0009295,SKNSHRA@0, 0 0 0 0 ENSG00000254538.1 ENST00000533978.1 chr8:74582676-74640293 3 393 57220 intergenic -2.05 0 0,1,0 0 0,0,0 0 6.80312827682628 0 0 9.67416987067459 0 0 10.2738727717581 1.175 0 0 NA lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000254538.1 ENST00000534723.1 chr8:74640078-74645132 2 381 4671 intergenic 1.03 0 0,1,0 0 0,0,0 0 4.33311924641404 0 0 3.23870691500749 0 0 5.25262256476129 0 0 0 cat,chimp,cow,elephant,human,macaque,marmoset,orangutan,panda,rabbit, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000254288.1 ENST00000519323.1 chr8:74964575-75012088 2 736 46775 intergenic 1.71 0 0,0,1 0 0,0,0 0 14.1039230358097 0 0 9.1928380545163 0 0 21.7276536611438 0 0 0 human, processed_transcript processed_transcript A549@0.002941,AG04450@0.0070395,BJ@0.019845,GM12878@0,H1HESC@0.012145,HELAS3@0,HEPG2@0.008661,HMEC@0,HSMM@0.0142415,HUVEC@0.107712,K562@0,MCF7@0,NHEK@0,NHLF@0.042067,SKNSHRA@0.0030795, 0 0 0 0 ENSG00000253115.1 ENST00000522498.1 chr8:75015751-75018979 2 427 2799 intergenic 1.67 0 0,1,0 0 0,0,0 0 0 107.885 0 2.22007859949982 113.916 0 0.986423722758128 120.674 0 0 cat,chimp,cow,dog,guinea_pig,horse,human,macaque,marmoset,orangutan,panda, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000253983.1 ENST00000522339.1 chr8:75111631-75120377 3 691 8051 intergenic 6.55 0 0,0,0 0 0,0,0 0 2.90199975158365 0 0 4.54266550739039 7.091 0 5.83616941994783 8.754 0 0 cat,chimp,cow,dog,horse,human,macaque,orangutan,pig,rabbit, antisense antisense A549@0,AG04450@0.018585,BJ@0,GM12878@0,H1HESC@0.012533,HELAS3@0.013023,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0.0188945,K562@0,MCF7@0,NHEK@0,NHLF@0.0028115,SKNSHRA@0, 0 0 0 0 ENSG00000253596.1 ENST00000521872.1 chr8:75259992-75262285 2 588 1703 intergenic 2.08 0 0,0,0 0 0,0,0 0 0 18.354 14.2823129251701 0 56.83 14.547619047619 1.42689371697005 50.085 0 0 chimp,elephant,human,macaque,orangutan,panda,pig, antisense antisense A549@0,AG04450@0,BJ@0,GM12878@0.004501,H1HESC@0.161908,HELAS3@0,HEPG2@0.0108335,HMEC@0,HSMM@0.006975,HUVEC@0,K562@0,MCF7@0.017424,NHEK@0,NHLF@0.006614,SKNSHRA@0.219414, 0 0 0 0 ENSG00000254080.1 ENST00000522127.1 chr8:75521933-75545555 5 672 22942 intronic -7.54 0 0,0,0 0 0,0,0 0 2.90554441635428 0 0 6.88318368058582 0 0 7.7353325778049 0 0 0 chimp,cow,dog,horse,human,macaque,marmoset,orangutan,panda,rabbit, antisense antisense A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0.0072555,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000253706.1 ENST00000523860.1 chr8:75711019-75779160 4 769 67366 encompassing -0.01 0 0,0,0 0 0,0,0 0 25.800329543093 0 0 29.440296291898 0 0 30.7179586141377 0 1 1 chimp,human,macaque,marmoset,orangutan, processed_transcript processed_transcript A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0.100032,HELAS3@0,HEPG2@0,HMEC@0.005297,HSMM@0,HUVEC@0,K562@0.421248,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0.033644, 0 0 0 0 ENSG00000253706.1 ENST00000518128.1 chr8:75728286-75779174 3 2807 48077 encompassing 2.16 1 0,0,0 0 0,0,0 8.65051656572854 28.1175822118685 0 29.9554684716779 30.57403748154 0 30.1681510509441 30.805853110635 0 0 0 chimp,cow,dog,guinea_pig,human,macaque,marmoset,mouse,orangutan,panda,pig,rabbit,rat, processed_transcript processed_transcript A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0.100032,HELAS3@0,HEPG2@0,HMEC@0.005297,HSMM@0,HUVEC@0,K562@0.421248,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0.033644, 0 0 0 0 ENSG00000253706.1 ENST00000522914.1 chr8:75757083-75779171 4 450 21632 intronic 2.05 0 0,0,0 0 0,0,0 0 16.7855954142012 0 0 20.7740846893491 0 2.7 22.7507396449704 0 0 1 chimp,human,macaque, processed_transcript processed_transcript A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0.100032,HELAS3@0,HEPG2@0,HMEC@0.005297,HSMM@0,HUVEC@0,K562@0.421248,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0.033644, 0 0 0 0 ENSG00000254043.1 ENST00000520696.1 chr8:75803386-75808537 2 736 4413 intergenic 0.30 0 0,1,0 0 0,0,0 0 0 0 0 6.38001359619307 0 0 11.7980965329708 0 0 0 chimp,dog,horse,human,macaque,marmoset,orangutan,panda,rabbit, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0.0061595, 0 0 0 0 ENSG00000254238.1 ENST00000520778.1 chr8:75938663-75941695 2 588 2442 exonic 0.08 0 0,0,0 0 0,0,0 51.6581632653061 20.4238329238329 157.935 60.5391156462585 23.0622440622441 140.039 53.2142857142857 25.9021294021294 115.033 0 0 chimp,cow,dog,elephant,horse,human,macaque,marmoset,orangutan,panda,pig,rat, antisense antisense A549@0.043607,AG04450@0,BJ@0,GM12878@0.0119185,H1HESC@0.0667295,HELAS3@0.011489,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0.0104545,NHEK@0,NHLF@0,SKNSHRA@0.816455, 0 0 0 0 ENSG00000253712.1 ENST00000467082.2 chr8:76079939-76088891 2 488 8462 intergenic -6.71 0 0,1,0 0 0,0,0 0 0 0 0 0 0 0 1.70834318128102 0 0 1 human,macaque,marmoset, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0.033295, 1 96 0 0 ENSG00000249395.2 ENST00000504531.2 chr8:76135639-76190696 3 1161 53892 intergenic 1.71 0 0,0,0 0 0,0,0 44.3548664944014 7.01332294218066 0 22.8475452196382 7.92087879462629 0 23.2385874246339 8.64452980034142 0 0 0 cat,chimp,cow,dog,elephant,guinea_pig,horse,human,macaque,marmoset,orangutan,panda,rabbit, lincRNA lincRNA A549@2.65942,AG04450@0,BJ@0,GM12878@0.062944,H1HESC@0.128025,HELAS3@0.034442,HEPG2@0.292117,HMEC@0,HSMM@0,HUVEC@0,K562@0.290276,MCF7@0.666941,NHEK@0.009973,NHLF@0.0016575,SKNSHRA@0.993499, 0 0 0 0 ENSG00000249395.2 ENST00000522183.1 chr8:76135938-76236976 2 831 100205 intergenic -1.29 0 0,0,0 0 0,0,0 61.9687123947052 11.0743176488199 0 31.9205776173285 12.5080884187416 0 32.4669073405535 17.7069906691283 0 0 0 cat,chimp,cow,dog,elephant,guinea_pig,horse,human,macaque,marmoset,orangutan,panda,rabbit, lincRNA lincRNA A549@2.65942,AG04450@0,BJ@0,GM12878@0.062944,H1HESC@0.128025,HELAS3@0.034442,HEPG2@0.292117,HMEC@0,HSMM@0,HUVEC@0,K562@0.290276,MCF7@0.666941,NHEK@0.009973,NHLF@0.0016575,SKNSHRA@0.993499, 0 0 0 0 ENSG00000249395.2 ENST00000521147.1 chr8:76136004-76190732 2 729 53997 intergenic 1.71 0 0,0,0 0 0,0,0 70.639231824417 6.9996851676945 0 36.3868312757202 7.90547623016093 0 37.0096021947874 8.62772005852177 0 0 0 cat,chimp,cow,dog,elephant,guinea_pig,horse,human,macaque,marmoset,orangutan,panda,rabbit, lincRNA lincRNA A549@2.65942,AG04450@0,BJ@0,GM12878@0.062944,H1HESC@0.128025,HELAS3@0.034442,HEPG2@0.292117,HMEC@0,HSMM@0,HUVEC@0,K562@0.290276,MCF7@0.666941,NHEK@0.009973,NHLF@0.0016575,SKNSHRA@0.993499, 0 0 0 0 ENSG00000249395.2 ENST00000523313.1 chr8:76136133-76236551 2 555 99861 intergenic -3.13 0 0,1,1 0 0,0,0 92.7855855855856 11.1124663281962 0 47.7945945945946 12.5511761348274 0 48.6126126126126 17.7679875026287 0 0 0 cat,chimp,cow,dog,elephant,guinea_pig,horse,human,macaque,marmoset,orangutan,panda,rabbit,rat, lincRNA lincRNA A549@2.65942,AG04450@0,BJ@0,GM12878@0.062944,H1HESC@0.128025,HELAS3@0.034442,HEPG2@0.292117,HMEC@0,HSMM@0,HUVEC@0,K562@0.290276,MCF7@0.666941,NHEK@0.009973,NHLF@0.0016575,SKNSHRA@0.993499, 0 0 0 0 ENSG00000254300.1 ENST00000518732.1 chr8:77318889-77436591 6 1657 116035 intergenic 1.33 0 0,0,0 0 0,0,0 132.869643934822 23.2848881802904 255.636 97.8630054315027 27.2398931356918 158.443 91.1418225709113 28.9673288231999 159.995 0 0 cat,chimp,cow,dog,elephant,guinea_pig,horse,human,macaque,marmoset,mouse,opossum,orangutan,panda,pig,rabbit,rat, lincRNA lincRNA A549@0.0026105,AG04450@0.269939,BJ@0.033046,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@1.24389,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0.4046,SKNSHRA@0.112638, 0 0 0 0 ENSG00000253661.1 ENST00000522961.1 chr8:77403435-77595391 3 237 191715 intronic 0 0 0,0,0 0 0,0,0 188.691983122363 59.3757869754584 433.974 136.620253164557 69.4296012309939 528.487 142.320675105485 69.9208303992907 508.812 0 0 cat,chimp,cow,dog,elephant,horse,human,macaque,orangutan,panda,pig,rabbit, lincRNA processed_transcript A549@0,AG04450@0.782818,BJ@0.223529,GM12878@0.049025,H1HESC@0.001446,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0.355467,HUVEC@0.0071055,K562@0,MCF7@0,NHEK@0,NHLF@0.106257,SKNSHRA@1.59783, 0 0 0 0 ENSG00000253681.1 ENST00000524269.1 chr8:77488786-77491580 2 337 2455 intergenic -2.71 0 0,0,0 0 0,0,0 380.623145400593 58.2366598778004 354.65 473.53115727003 95.4562118126273 360.932 478.925816023739 93.9230142566191 298.544 0 0 cat,chimp,cow,dog,elephant,horse,human,macaque,marmoset,opossum,orangutan,panda,pig,platypus,rabbit, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000253661.1 ENST00000518143.1 chr8:77523116-77595513 4 1707 70684 intronic 1.23 0 1,1,1 0 0,0,0 131.222612770943 71.641106898308 439.586 139.183362624487 85.1880906570086 538.312 146.708260105448 84.1335238526399 510.095 0 0 cat,chimp,cow,dog,elephant,guinea_pig,horse,human,macaque,marmoset,opossum,orangutan,panda,pig,rabbit,rat, lincRNA processed_transcript A549@0,AG04450@0.782818,BJ@0.223529,GM12878@0.049025,H1HESC@0.001446,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0.355467,HUVEC@0.0071055,K562@0,MCF7@0,NHEK@0,NHLF@0.106257,SKNSHRA@1.59783, 0 0 0 0 ENSG00000253661.1 ENST00000521894.1 chr8:77523611-77527556 2 819 3124 intergenic -4.59 0 0,0,1 0 0,0,0 0 35.8674775928297 0 1.75091575091575 42.3946862996159 0 3.97435897435897 29.5957106274008 0 0 0 cat,chimp,cow,dog,elephant,guinea_pig,horse,human,macaque,marmoset,opossum,orangutan, lincRNA processed_transcript A549@0,AG04450@0.782818,BJ@0.223529,GM12878@0.049025,H1HESC@0.001446,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0.355467,HUVEC@0.0071055,K562@0,MCF7@0,NHEK@0,NHLF@0.106257,SKNSHRA@1.59783, 0 0 0 0 ENSG00000253661.1 ENST00000522357.1 chr8:77523909-77527263 2 588 2764 intergenic 3.47 0 0,0,0 0 0,0,0 0 40.5390738060782 0 0 47.9164254703329 0 0 33.4504341534009 0 0 0 cat,chimp,cow,dog,guinea_pig,horse,human,macaque,marmoset,opossum,orangutan, lincRNA processed_transcript A549@0,AG04450@0.782818,BJ@0.223529,GM12878@0.049025,H1HESC@0.001446,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0.355467,HUVEC@0.0071055,K562@0,MCF7@0,NHEK@0,NHLF@0.106257,SKNSHRA@1.59783, 0 0 0 0 ENSG00000253661.1 ENST00000523977.1 chr8:77527427-77528676 2 246 1001 intergenic -3.52 0 0,0,0 0 0,0,0 0 0 122.543 0 0 93.055 0 0 97.38 0 0 cat,chimp,elephant,guinea_pig,horse,human,macaque,marmoset,orangutan,rabbit, lincRNA processed_transcript A549@0,AG04450@0.782818,BJ@0.223529,GM12878@0.049025,H1HESC@0.001446,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0.355467,HUVEC@0.0071055,K562@0,MCF7@0,NHEK@0,NHLF@0.106257,SKNSHRA@1.59783, 0 0 0 0 ENSG00000253416.1 ENST00000519660.1 chr8:77816827-77825635 3 648 8156 intergenic -5.66 0 0,0,0 0 0,0,0 0 7.07712113781265 0 0 8.1174595389897 8.473 2.79783950617284 12.9749877390878 8.881 0 0 cat,chimp,dog,horse,human,macaque,marmoset,orangutan,panda, lincRNA lincRNA A549@0,AG04450@0.004953,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000254366.1 ENST00000518706.1 chr8:78311308-78518940 8 711 206907 intergenic 0 0 0,0,1 0 0,0,0 64.9310829817159 17.8020318307259 207.371 82.3459915611814 25.7465672983514 208.995 83.4992967651196 27.4989101383713 201.917 0 0 chimp,cow,dog,elephant,guinea_pig,horse,human,macaque,marmoset,mouse,opossum,orangutan,panda,pig,rabbit,rat, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000254366.1 ENST00000524014.1 chr8:78362933-78388617 3 243 25437 intergenic 0 0 0,0,0 0 0,0,0 0 47.348626017219 0 0 48.8023744938475 0 0 56.8504540629791 0 0 1 chimp,human,orangutan, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000254001.1 ENST00000521879.1 chr8:79060336-79066148 2 556 5254 intergenic 1.47 1 0,0,0 0 0,0,0 0 1.21431290445375 0 0 0.900837457175485 0 0 1.01789113056719 0 0 0 cat,chimp,human,marmoset, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000254001.1 ENST00000520603.1 chr8:79064557-79066148 2 506 1083 intergenic -14.66 1 0,1,0 0 0,0,0 0 5.89104339796861 0 0 4.37026777469991 0 0 4.93813481071099 0 0 0 cat,chimp,cow,dog,elephant,human,macaque,marmoset,orangutan,panda,pig, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000254266.1 ENST00000522807.1 chr8:79338338-79470728 5 687 131695 intronic 2.55 0 0,1,1 0 0,0,0 54.0509461426492 5.51334522950757 0 176.786026200873 7.70888796081855 0 144.152838427948 8.50053532784084 0 0 0 cat,chimp,cow,dog,elephant,guinea_pig,horse,human,macaque,marmoset,mouse,opossum,orangutan,pig,rabbit,rat, lincRNA lincRNA A549@0,AG04450@0,BJ@0.0012035,GM12878@0.0462,H1HESC@0.004403,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0.002291,HUVEC@0,K562@0.003894,MCF7@0.002971,NHEK@0,NHLF@0.003922,SKNSHRA@0.109933, 0 0 0 0 ENSG00000254266.1 ENST00000522302.1 chr8:79446127-79470738 3 2008 22599 intronic 0.29 0 0,1,0 0 0,0,0 0 4.65356874197973 0 11.027390438247 5.5068808354352 0 12.7514940239044 6.6606044515244 0 0 0 chimp,dog,elephant,horse,human,marmoset,orangutan,pig,rabbit, lincRNA lincRNA A549@0,AG04450@0,BJ@0.0012035,GM12878@0.0462,H1HESC@0.004403,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0.002291,HUVEC@0,K562@0.003894,MCF7@0.002971,NHEK@0,NHLF@0.003922,SKNSHRA@0.109933, 0 0 0 0 ENSG00000254266.1 ENST00000519242.1 chr8:79447261-79470732 4 991 22474 intronic 0.29 0 0,1,0 0 0,0,0 0 4.67945181098158 0 22.3440968718466 5.53751001156892 0 25.8375378405651 6.69765061849248 0 1 1 chimp,human,macaque,marmoset,orangutan, lincRNA lincRNA A549@0,AG04450@0,BJ@0.0012035,GM12878@0.0462,H1HESC@0.004403,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0.002291,HUVEC@0,K562@0.003894,MCF7@0.002971,NHEK@0,NHLF@0.003922,SKNSHRA@0.109933, 0 0 0 0 ENSG00000253659.1 ENST00000519983.1 chr8:80209952-80226706 3 630 16120 intergenic -1.32 0 0,0,0 0 0,0,0 0 11.4343052109181 0 0 13.0813895781638 0 0 14.4983870967742 0 0 0 chimp,cow,dog,elephant,guinea_pig,horse,human,macaque,marmoset,orangutan,panda,pig, lincRNA lincRNA A549@0,AG04450@0,BJ@0.007779,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@6.95395, 0 0 0 0 ENSG00000249328.2 ENST00000502766.2 chr8:80681607-80783972 6 2120 100235 intergenic 3.93 0 0,1,1 0 0,0,0 4.50943396226415 29.2500922831346 96.813 1.01462264150943 24.5340549708186 54.051 1.06556603773585 27.4338205217738 54.634 1 1 chimp,human,macaque,marmoset,orangutan, lincRNA lincRNA A549@0.0288145,AG04450@0.0095025,BJ@0.020061,GM12878@0,H1HESC@0,HELAS3@0.113786,HEPG2@0.0145965,HMEC@0.013482,HSMM@0.029223,HUVEC@0.058514,K562@0.0240695,MCF7@0.0114765,NHEK@0.00523833,NHLF@0,SKNSHRA@0.0716175, 0 0 0 0 ENSG00000249328.2 ENST00000517365.1 chr8:80732804-80783994 4 494 50690 intergenic 5.89 0 0,1,0 0 0,0,0 45 39.2962122706648 91.261 12.1457489878543 32.8612546853423 51.819 12.6133603238866 36.6730518840008 52.303 0 0 cat,chimp,cow,dog,horse,human,macaque,marmoset,orangutan,panda,pig,rabbit, lincRNA lincRNA A549@0.0288145,AG04450@0.0095025,BJ@0.020061,GM12878@0,H1HESC@0,HELAS3@0.113786,HEPG2@0.0145965,HMEC@0.013482,HSMM@0.029223,HUVEC@0.058514,K562@0.0240695,MCF7@0.0114765,NHEK@0.00523833,NHLF@0,SKNSHRA@0.0716175, 0 0 0 0 ENSG00000254205.1 ENST00000522494.1 chr8:81035087-81039905 2 362 4454 intronic 1.01 0 0,0,0 0 0,0,0 0 3.2312528064661 0 0 1.51549169286035 0 0 1.62213740458015 0 0 0 cat,chimp,horse,human,macaque,marmoset,orangutan,panda,rabbit, antisense antisense A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000253238.1 ENST00000522044.1 chr8:81178389-81252075 4 440 73240 intergenic 0 0 0,0,0 0 0,0,0 0 12.219320043692 0 0 7.66787274713271 0 3.31363636363636 16.3066357181868 438.345 1 1 chimp,human,macaque,marmoset,orangutan, processed_transcript processed_transcript A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000254162.1 ENST00000523871.1 chr8:81447241-81451370 2 3764 363 intergenic -3.92 0 0,0,0 0 0,0,0 0 0 6.6 2.57146652497343 0 0 3.43676939426142 0 0 0 1 chimp,human,macaque,orangutan, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0.007948,HUVEC@0,K562@0,MCF7@0,NHEK@0.000699667,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000244833.1 ENST00000501214.1 chr8:81806189-81864554 4 1785 56574 intergenic 7.58 0 0,0,0 0 0,0,0 24.2028011204482 15.2161947184219 8.481 34.3182072829132 13.2395269911974 21.434 42.4655462184874 13.9027821967688 25.158 1 1 chimp,human,macaque,marmoset,orangutan, lincRNA lincRNA A549@0.006919,AG04450@0,BJ@0,GM12878@0,H1HESC@0.0033225,HELAS3@0.044331,HEPG2@0.107542,HMEC@0,HSMM@0,HUVEC@0.009648,K562@0.003047,MCF7@0.0229605,NHEK@0,NHLF@0,SKNSHRA@0.0015545, 0 0 0 0 ENSG00000254060.1 ENST00000518302.1 chr8:81949199-81953066 3 542 3321 intronic -1.45 0 0,0,0 0 0,0,0 0 2.51731406202951 0 32.5479704797048 1.83860283047275 28.037 21.9833948339483 2.72990063233966 47.498 0 0 cat,chimp,dog,horse,human,macaque,marmoset,orangutan, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0.0166015,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0.0151015,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0.007081,SKNSHRA@0, 0 0 0 0 ENSG00000254177.1 ENST00000519107.1 chr8:81970758-81979979 2 429 8790 intronic -4.88 0 0,1,0 0 0,0,0 172.181818181818 15.1681456200228 0 37.981351981352 15.6665529010239 0 62.4428904428904 17.7796359499431 0 0 0 chimp,human,macaque,marmoset,orangutan,rat, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000253214.1 ENST00000519412.1 chr8:82066514-82071318 3 817 3983 intergenic -3.02 0 0,1,0 0 0,0,0 0 56.1142355008787 101.787 6.00979192166463 40.2194325885011 87.71 8.54345165238678 44.6301782575948 70.545 0 0 chimp,cow,dog,elephant,guinea_pig,horse,human,macaque,marmoset,orangutan,panda,rabbit, lincRNA lincRNA A549@0,AG04450@0.0084775,BJ@0.0063205,GM12878@0.055153,H1HESC@0,HELAS3@0.029687,HEPG2@0.0025985,HMEC@0.004993,HSMM@0.036336,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0.0242055,SKNSHRA@0, 0 0 0 0 ENSG00000253214.1 ENST00000521953.1 chr8:82066565-82076834 3 519 9746 intergenic -3.51 0 1,1,1 0 0,0,0 0 22.9327929406936 101.787 0 16.7770367330187 87.234 0 19.001231274369 71.405 0 0 chimp,horse,human,macaque,marmoset,orangutan, lincRNA lincRNA A549@0,AG04450@0.0084775,BJ@0.0063205,GM12878@0.055153,H1HESC@0,HELAS3@0.029687,HEPG2@0.0025985,HMEC@0.004993,HSMM@0.036336,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0.0242055,SKNSHRA@0, 1 96 0 0 ENSG00000254027.1 ENST00000518880.1 chr8:82192106-82193681 2 618 955 exonic 13.34 0 1,1,1 0 0,0,0 0 30.9874345549738 0 2.32038834951456 38.3287958115183 0 1.96601941747573 37.2408376963351 0 0 0 chimp,human,macaque,marmoset,orangutan,panda,pig,rabbit, antisense antisense A549@0.0918335,AG04450@0.02627,BJ@0.021485,GM12878@0.029768,H1HESC@0.196713,HELAS3@0.485512,HEPG2@0.264379,HMEC@0.052834,HSMM@0.065888,HUVEC@0.260235,K562@0.0043015,MCF7@0.0386065,NHEK@0.068826,NHLF@0.0224645,SKNSHRA@0.12774, 0 0 0 0 ENSG00000254027.1 ENST00000517670.1 chr8:82192122-82192910 2 569 217 exonic 4.36 0 0,1,1 0 0,0,0 41.195079086116 14.852534562212 2.344 47.8242530755712 28.3917050691244 3.902 44.8084358523726 28.7281105990783 4.199 0 0 chimp,human,macaque,marmoset,orangutan,panda,pig,rabbit, antisense antisense A549@0.0918335,AG04450@0.02627,BJ@0.021485,GM12878@0.029768,H1HESC@0.196713,HELAS3@0.485512,HEPG2@0.264379,HMEC@0.052834,HSMM@0.065888,HUVEC@0.260235,K562@0.0043015,MCF7@0.0386065,NHEK@0.068826,NHLF@0.0224645,SKNSHRA@0.12774, 0 0 0 0 ENSG00000253859.2 ENST00000524085.2 chr8:82351671-82434053 4 542 81834 encompassing 3.83 0 0,0,1 0 0,0,0 65.9446494464945 8.41769924481267 0 67.7878228782288 12.0078207102183 0 152.573800738007 15.4343426937459 0 0 0 cat,chimp,cow,dog,horse,human,macaque,marmoset,orangutan,rabbit, antisense antisense A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000253374.1 ENST00000523380.1 chr8:82433853-82445510 4 855 10796 intronic 2.01 0 0,1,0 0 0,0,0 49.3356725146199 16.789273805113 0 50.7146198830409 17.614116339385 28.305 178.229239766082 45.1355131530196 91.83 0 1 chimp,human,marmoset,orangutan, antisense antisense A549@0,AG04450@0,BJ@0.004165,GM12878@0,H1HESC@0.0028805,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000253374.1 ENST00000518637.1 chr8:82433870-82438760 3 554 4332 intronic -12.35 0 0,1,1 0 0,0,0 76.1407942238267 24.3451061865189 0 78.2689530685921 24.4656048014774 28.305 244.747292418773 77.8044783010157 104.495 0 0 chimp,horse,human,opossum,orangutan,panda, antisense antisense A549@0,AG04450@0,BJ@0.004165,GM12878@0,H1HESC@0.0028805,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000253334.1 ENST00000524337.1 chr8:82704058-82727949 2 476 23413 exonic -0.91 0 0,0,0 0 0,0,0 83.0126050420168 17.0642378165976 0 76.5882352941177 15.9305941143809 0 79.2268907563025 48.9554520992611 0 0 0 cat,chimp,cow,dog,elephant,guinea_pig,horse,human,macaque,marmoset,mouse,opossum,orangutan,panda,pig,rabbit,rat, processed_transcript processed_transcript A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0.0048895,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0.0099955,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000254689.1 ENST00000534675.1 chr8:82797612-82835428 2 464 37350 intergenic -6.32 0 0,0,1 0 0,0,0 0 4.47874163319946 0 7.21120689655172 6.86366800535475 4.71 7.33189655172414 8.11236947791165 9.798 0 0 chimp,cow,dog,elephant,guinea_pig,horse,human,macaque,marmoset,orangutan,panda, lincRNA lincRNA A549@0.009316,AG04450@0.019727,BJ@0.010386,GM12878@0.044667,H1HESC@0.0222585,HELAS3@0.010031,HEPG2@0.013813,HMEC@0,HSMM@0.008831,HUVEC@0,K562@0.010541,MCF7@0.0307875,NHEK@0.011145,NHLF@0,SKNSHRA@0.03895, 0 0 0 0 ENSG00000254123.1 ENST00000520155.1 chr8:83010686-83072812 3 820 61302 intergenic -2.62 0 0,0,0 0 0,0,0 0 4.57508727284591 0 0 7.29819581742847 0 0 7.06190662621122 0 0 0 cat,chimp,cow,dog,elephant,guinea_pig,horse,human,macaque,marmoset,orangutan,panda,rabbit,rat, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000254123.1 ENST00000520988.1 chr8:83020800-83072777 3 456 51517 intergenic -4.62 0 0,0,0 0 0,0,0 29.8245614035088 2.47908457402411 0 20.3245614035088 2.74833550090261 0 26.9802631578947 3.09620125395501 0 0 0 chimp,horse,human,marmoset, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000253503.1 ENST00000522776.1 chr8:83426803-83589388 7 537 162036 intergenic 0.13 0 0,1,0 0 0,0,0 0 6.36153694240786 0 0 6.67186304278062 0 0 9.01205904860648 0 0 0 chimp,human,macaque,marmoset,orangutan,rabbit, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000253503.1 ENST00000518367.1 chr8:83435571-83448642 3 254 12813 intergenic 3.28 0 0,0,1 0 0,0,0 0 0 0 0 1.82197767891985 0 0 3.89323343479279 0 0 1 chimp,human,macaque,orangutan, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000253836.1 ENST00000522123.1 chr8:83775014-83870931 6 808 95099 intergenic -2.37 0 0,0,0 0 0,0,0 0 4.30536598702405 0 0 3.108402822322 5.185 0 4.35484074490794 6.847 1 1 chimp,human,macaque,marmoset,orangutan, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000254394.1 ENST00000524359.1 chr8:83824339-83874161 4 612 49204 intergenic 0.47 0 0,0,0 0 0,0,0 0 5.83861068205837 0 0 4.75115844240306 0 0 6.30430452808715 0 0 0 chimp,dog,horse,human,macaque,marmoset,orangutan,panda, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000253898.1 ENST00000522365.1 chr8:84315993-84321135 2 1519 3621 intergenic 5.68 0 0,1,0 0 0,0,0 0 0 0 0 0 0 0 0 0 0 0 chimp,dog,human,macaque,marmoset,panda, lincRNA lincRNA A549@0.0055085,AG04450@0,BJ@0,GM12878@0.0632425,H1HESC@0,HELAS3@0.0114305,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0.205471,MCF7@0.013278,NHEK@0,NHLF@0,SKNSHRA@0.005977, 0 0 0 0 ENSG00000254202.1 ENST00000523678.1 chr8:84824948-85052518 4 636 226928 intergenic 2.36 0 0,0,0 0 0,0,0 0 5.51183635338081 0 0 5.82739018543326 0 0 7.50505446661496 0 1 1 chimp,human,macaque,marmoset,orangutan, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0.0119565, 1 96 0 0 ENSG00000254208.1 ENST00000520129.1 chr8:86089757-86090385 2 466 160 exonic 0.42 0 0,1,1 0 0,0,0 0 57.5 0 128.44635193133 46.51875 6.695 164.021459227468 78.16875 3.757 0 0 cat,chimp,cow,dog,elephant,guinea_pig,horse,human,macaque,marmoset,orangutan,panda,pig,rabbit,rat, antisense antisense A549@0.0112705,AG04450@0,BJ@0.0222045,GM12878@0.005674,H1HESC@0.044369,HELAS3@0.0680505,HEPG2@0.118961,HMEC@0,HSMM@0.004871,HUVEC@0.006359,K562@0.011648,MCF7@0,NHEK@0.013295,NHLF@0,SKNSHRA@0.0253425, 0 0 0 0 ENSG00000253549.1 ENST00000517697.1 chr8:86354080-86376562 3 556 21922 exonic 5.03 0 0,1,0 0 0,0,0 78.3597122302158 17.6316941884865 0 85.6276978417266 28.8132469665177 19.021 90.3489208633093 28.7785785968434 22.063 0 0 chimp,elephant,guinea_pig,human,macaque,marmoset,mouse,rat, antisense antisense A549@0.005048,AG04450@0,BJ@0,GM12878@0,H1HESC@0.104583,HELAS3@0.0052545,HEPG2@0,HMEC@0.049128,HSMM@0,HUVEC@0,K562@0,MCF7@0.396982,NHEK@0.187035,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000253549.1 ENST00000521761.1 chr8:86354276-86377144 3 588 22276 exonic 3.07 0 0,0,0 0 0,0,0 74.0952380952381 17.3514993715209 24.794 83.6241496598639 28.5839468486263 48.763 88.8605442176871 28.3815765846651 58.377 0 0 chimp,human,macaque,marmoset,orangutan,rabbit, antisense antisense A549@0.005048,AG04450@0,BJ@0,GM12878@0,H1HESC@0.104583,HELAS3@0.0052545,HEPG2@0,HMEC@0.049128,HSMM@0,HUVEC@0,K562@0,MCF7@0.396982,NHEK@0.187035,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000253549.1 ENST00000524052.1 chr8:86368852-86375283 3 427 6000 intergenic 0 0 0,1,0 0 0,0,0 0 0 10.064 0 2.48616666666667 76.217 0 3.02216666666667 62.115 0 0 chimp,human,macaque,marmoset,orangutan,pig, antisense antisense A549@0.005048,AG04450@0,BJ@0,GM12878@0,H1HESC@0.104583,HELAS3@0.0052545,HEPG2@0,HMEC@0.049128,HSMM@0,HUVEC@0,K562@0,MCF7@0.396982,NHEK@0.187035,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000254380.1 ENST00000520459.1 chr8:86436128-86452740 3 674 15934 intergenic 6.41 0 0,0,0 0 0,0,0 0 2.53432910756872 0 0 2.85816493033764 0 0 3.21965608133551 0 0 0 chimp,dog,human,macaque,marmoset,orangutan, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0.011767,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0.009111,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000255694.1 ENST00000508419.2 chr8:86776919-86804581 2 7030 20630 intergenic 32.06 0 0,0,0 0 0,0,0 0 0 0 0 0 0 86.65106685633 31.4544837615124 231.954 0 1 human,orangutan, lincRNA lincRNA A549@0.000959,AG04450@0.001834,BJ@0.001971,GM12878@0,H1HESC@0.0008275,HELAS3@0.003074,HEPG2@0.0023275,HMEC@0.021034,HSMM@0.019183,HUVEC@0.0006915,K562@0.0003875,MCF7@0.000585,NHEK@0.00449767,NHLF@0.0028655,SKNSHRA@0.000765, 0 0 0 0 ENSG00000253154.1 ENST00000517368.1 chr8:86851934-86920842 4 513 68389 intergenic -2.81 1 1,1,1 0 0,0,0 0 4.03004869204112 0 16.6783625730994 5.49681966398105 0 17.3235867446394 6.36249981722207 0 0 0 cat,chimp,cow,dog,elephant,guinea_pig,horse,human,macaque,marmoset,orangutan,panda,pig,rabbit, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0.01584,HSMM@0,HUVEC@0,K562@0.24749,MCF7@1.04186,NHEK@0.017453,NHLF@0,SKNSHRA@0.0087845, 0 0 0 0 ENSG00000253154.1 ENST00000518266.1 chr8:86901752-86963312 2 369 61189 intergenic -0.85 0 0,1,0 0 0,0,0 0 2.28626060239586 0 3.23848238482385 2.96679141675791 8.883 5.02710027100271 3.9846541044959 9.304 0 0 cat,chimp,cow,dog,elephant,guinea_pig,horse,human,macaque,marmoset,orangutan,panda,pig,rabbit, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0.01584,HSMM@0,HUVEC@0,K562@0.24749,MCF7@1.04186,NHEK@0.017453,NHLF@0,SKNSHRA@0.0087845, 0 0 0 0 ENSG00000253675.1 ENST00000522679.1 chr8:87111194-87166454 2 275 54983 exonic 0 0 1,1,1 0 0,0,0 111.927272727273 13.3435061746358 0 152.181818181818 12.8529909244676 0 174.272727272727 15.025444228216 0 0 0 cat,chimp,cow,dog,elephant,guinea_pig,horse,human,macaque,marmoset,mouse,opossum,orangutan,panda,pig,rabbit,rat, antisense antisense A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000253675.1 ENST00000524253.1 chr8:87165663-87166435 2 362 408 exonic 0 0 0,1,0 0 0,0,0 0 0 0 0 0 0 0 0 0 1 1 chimp,human,macaque,marmoset,orangutan, antisense antisense A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000253699.1 ENST00000523112.1 chr8:87192647-87224465 5 496 31314 intergenic 2.89 0 0,0,0 0 0,0,0 0 1.05812096825701 0 0 3.30711502842179 0 0 14.2441719358753 0 0 0 chimp,dog,elephant,horse,human,macaque,marmoset,orangutan,panda,pig, antisense antisense A549@0.0043325,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0.004013,NHEK@0.0117943,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000254231.1 ENST00000521326.1 chr8:87345503-87355543 4 1482 8552 intronic 8.27 1 0,0,1 0 0,0,0 0 21.5610383536015 0 16.4595141700405 18.1762160898036 14.596 17.059379217274 21.3022684752105 15.629 0 1 human,macaque,orangutan, lincRNA lincRNA A549@0.089921,AG04450@0.00396,BJ@0.025967,GM12878@0.035969,H1HESC@0.0826625,HELAS3@0.212217,HEPG2@0.814219,HMEC@0.045821,HSMM@0.011395,HUVEC@0.0320735,K562@0.0082045,MCF7@0.629773,NHEK@0.042491,NHLF@0.0052085,SKNSHRA@0.0150845, 0 0 0 0 ENSG00000254231.1 ENST00000523218.1 chr8:87350162-87355421 2 564 4693 intronic 8.27 0 0,1,0 0 0,0,0 0 39.2904325591306 0 27.991134751773 19.7134029405498 22.871 28.7375886524823 24.243980396335 23.382 0 0 dog,elephant,human,macaque,orangutan,panda, lincRNA retained_intron A549@0.089921,AG04450@0.00396,BJ@0.025967,GM12878@0.035969,H1HESC@0.0826625,HELAS3@0.212217,HEPG2@0.814219,HMEC@0.045821,HSMM@0.011395,HUVEC@0.0320735,K562@0.0082045,MCF7@0.629773,NHEK@0.042491,NHLF@0.0052085,SKNSHRA@0.0150845, 0 0 0 0 ENSG00000254115.1 ENST00000519041.1 chr8:87719775-87777251 3 801 56671 intronic 3.39 0 0,1,0 0 0,0,0 0 17.2753612959009 158.42 0 17.0390499550034 30.25 0 18.8494644527183 33.785 0 0 human,panda, antisense antisense A549@0,AG04450@0,BJ@0,GM12878@0.202223,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0.0025005,NHEK@0.001642,NHLF@0,SKNSHRA@0.460037, 0 0 0 0 ENSG00000253778.1 ENST00000520649.1 chr8:87778163-87830786 6 755 51858 intergenic -1.79 0 0,0,0 0 0,0,0 0 5.4474526591847 0 0 8.12389602375718 0 0 14.6884569401057 0 0 0 cat,chimp,cow,dog,elephant,horse,human,macaque,marmoset,orangutan,pig, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0.0167565,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0.005991,HUVEC@0,K562@0,MCF7@0.0079255,NHEK@0,NHLF@0,SKNSHRA@0.147684, 0 0 0 0 ENSG00000253500.1 ENST00000440763.2 chr8:88554214-88767923 4 705 212998 intronic 2.15 0 0,0,0 0 0,0,0 0 4.58279889952018 0 0 3.10631085737894 0 0 5.32363214678072 0 0 0 chimp,horse,human,macaque,marmoset,orangutan,rabbit, processed_transcript processed_transcript A549@0.0030615,AG04450@0,BJ@0,GM12878@0.003306,H1HESC@0.00237,HELAS3@1.3215,HEPG2@0.228763,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0.00122267,NHLF@0,SKNSHRA@0.002173, 0 0 0 0 ENSG00000253500.1 ENST00000517711.1 chr8:88578398-88746071 4 1040 166627 intronic -1.50 0 0,0,0 0 0,0,0 0 4.40596662005557 0 0 2.69781608022709 0 0 5.18346966578045 0 1 1 chimp,human,macaque,marmoset,orangutan, processed_transcript processed_transcript A549@0.0030615,AG04450@0,BJ@0,GM12878@0.003306,H1HESC@0.00237,HELAS3@1.3215,HEPG2@0.228763,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0.00122267,NHLF@0,SKNSHRA@0.002173, 0 0 0 0 ENSG00000253500.1 ENST00000518494.1 chr8:88578708-88767946 5 821 188409 intronic -2.08 0 0,0,0 0 0,0,0 0 3.98556862994867 0 0 2.53183765106762 0 0 4.87640717800105 0 1 1 chimp,human,macaque,marmoset,orangutan, processed_transcript processed_transcript A549@0.0030615,AG04450@0,BJ@0,GM12878@0.003306,H1HESC@0.00237,HELAS3@1.3215,HEPG2@0.228763,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0.00122267,NHLF@0,SKNSHRA@0.002173, 0 0 0 0 ENSG00000253171.1 ENST00000518129.1 chr8:88986393-89031341 6 641 44297 intergenic 0.03 0 0,0,0 0 0,0,0 53.6630265210608 26.1916156850351 0 28.3650546021841 20.1855881888164 14.484 36.9734789391576 22.8549788924758 17.322 1 1 chimp,human,macaque,marmoset,orangutan, antisense antisense A549@0.0104255,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0.004102,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0.0165095,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000253553.1 ENST00000523254.1 chr8:89339065-89554980 3 494 215417 exonic 3.71 0 0,1,0 0 0,0,0 398.686234817814 5.71415904965718 285.849 317.006072874494 5.92452777635934 209.462 285.817813765182 11.408045790258 154.546 0 0 cat,chimp,cow,dog,elephant,guinea_pig,horse,human,macaque,marmoset,mouse,opossum,orangutan,panda,pig,rabbit,rat, processed_transcript processed_transcript A549@0,AG04450@0.0594075,BJ@0.0586305,GM12878@0.004231,H1HESC@0.496658,HELAS3@0,HEPG2@0.005378,HMEC@0,HSMM@0,HUVEC@0.0096235,K562@0,MCF7@0.0663165,NHEK@0,NHLF@0,SKNSHRA@0.500634, 0 0 0 0 ENSG00000253553.1 ENST00000520849.1 chr8:89340073-89341696 2 592 1029 intronic -5.20 0 0,0,0 1 0,0,0 45.0608108108108 80.2118561710399 339.02 27.8716216216216 68.2604470359572 290.261 31.4864864864865 74.7755102040816 294.714 0 0 cat,chimp,cow,elephant,guinea_pig,horse,human,macaque,marmoset,mouse,orangutan,panda,rabbit, processed_transcript processed_transcript A549@0,AG04450@0.0594075,BJ@0.0586305,GM12878@0.004231,H1HESC@0.496658,HELAS3@0,HEPG2@0.005378,HMEC@0,HSMM@0,HUVEC@0.0096235,K562@0,MCF7@0.0663165,NHEK@0,NHLF@0,SKNSHRA@0.500634, 0 0 0 0 ENSG00000253553.1 ENST00000521433.1 chr8:89340073-89721769 5 574 381114 intronic -2.25 0 0,0,0 1 0,0,0 180.09756097561 4.98296572679041 339.02 83.1968641114983 5.10720939141569 290.261 70.3118466898955 9.41899011844225 294.714 0 0 cat,chimp,horse,human,macaque,marmoset,mouse,orangutan,pig,rabbit,rat, processed_transcript processed_transcript A549@0,AG04450@0.0594075,BJ@0.0586305,GM12878@0.004231,H1HESC@0.496658,HELAS3@0,HEPG2@0.005378,HMEC@0,HSMM@0,HUVEC@0.0096235,K562@0,MCF7@0.0663165,NHEK@0,NHLF@0,SKNSHRA@0.500634, 0 0 0 0 ENSG00000253553.1 ENST00000520312.1 chr8:89554833-89721956 2 552 166569 intergenic 2.46 0 0,0,0 0 0,0,0 165.670289855072 5.46499048442387 162.25 148.179347826087 5.10873571913141 137.147 129.114130434783 7.95728496899183 146.773 0 0 chimp,human,macaque,marmoset,orangutan,panda, processed_transcript processed_transcript A549@0,AG04450@0.0594075,BJ@0.0586305,GM12878@0.004231,H1HESC@0.496658,HELAS3@0,HEPG2@0.005378,HMEC@0,HSMM@0,HUVEC@0.0096235,K562@0,MCF7@0.0663165,NHEK@0,NHLF@0,SKNSHRA@0.500634, 0 0 0 0 ENSG00000253553.1 ENST00000518631.1 chr8:89554846-89721920 2 574 166498 intergenic 2.46 0 0,0,0 0 0,0,0 218.937282229965 5.21572631503081 169.92 127.439024390244 5.11091424521616 145.792 109.398954703833 7.96067820634483 155.249 1 1 chimp,human,macaque,marmoset,orangutan, processed_transcript processed_transcript A549@0,AG04450@0.0594075,BJ@0.0586305,GM12878@0.004231,H1HESC@0.496658,HELAS3@0,HEPG2@0.005378,HMEC@0,HSMM@0,HUVEC@0.0096235,K562@0,MCF7@0.0663165,NHEK@0,NHLF@0,SKNSHRA@0.500634, 0 0 0 0 ENSG00000253553.1 ENST00000521936.1 chr8:89712520-89749363 2 1467 35374 intergenic -4.65 1 0,0,0 0 0,0,0 0 8.31378978911065 0 0 5.25976706055295 0 4.78459441036128 7.121756092045 0 0 0 cat,chimp,cow,dog,elephant,guinea_pig,horse,human,macaque,marmoset,mouse,opossum,orangutan,panda,pig,rabbit,rat, processed_transcript processed_transcript A549@0,AG04450@0.0594075,BJ@0.0586305,GM12878@0.004231,H1HESC@0.496658,HELAS3@0,HEPG2@0.005378,HMEC@0,HSMM@0,HUVEC@0.0096235,K562@0,MCF7@0.0663165,NHEK@0,NHLF@0,SKNSHRA@0.500634, 0 0 0 0 ENSG00000251136.2 ENST00000519655.1 chr8:90621629-90769955 7 1400 146914 intergenic -1.20 0 0,1,0 1 0,0,0 6.43571428571429 6.14289992784895 82.176 9.69214285714286 8.08997781014743 86.746 11.5885714285714 9.89387668976408 95.204 0 0 chimp,human,marmoset,orangutan,pig, lincRNA processed_transcript A549@4.11933,AG04450@3.51281,BJ@2.77984,GM12878@8.30656,H1HESC@3.64013,HELAS3@2.94006,HEPG2@2.197,HMEC@0.781376,HSMM@0.898006,HUVEC@1.81421,K562@3.00162,MCF7@5.79445,NHEK@2.62686,NHLF@0.73559,SKNSHRA@3.91716, 0 0 0 0 ENSG00000251136.2 ENST00000524166.1 chr8:90623585-90629386 3 833 4964 intergenic 1.05 0 0,0,1 0 0,0,0 36.4969987995198 7.40229653505238 0 19.4177671068427 32.1891619661563 11.032 21.1164465786315 29.4484286865431 9.868 0 0 cat,chimp,cow,dog,elephant,guinea_pig,horse,human,macaque,marmoset,mouse,orangutan,panda,pig,rabbit,rat, lincRNA processed_transcript A549@4.11933,AG04450@3.51281,BJ@2.77984,GM12878@8.30656,H1HESC@3.64013,HELAS3@2.94006,HEPG2@2.197,HMEC@0.781376,HSMM@0.898006,HUVEC@1.81421,K562@3.00162,MCF7@5.79445,NHEK@2.62686,NHLF@0.73559,SKNSHRA@3.91716, 0 0 0 0 ENSG00000251136.2 ENST00000520306.1 chr8:90629158-90633104 2 419 3525 intergenic -4.25 0 0,0,1 0 0,0,0 0 7.44255319148936 28.355 13.6897374701671 7.49475177304965 90.426 0 7.47971631205674 90.59 0 0 cat,chimp,dog,guinea_pig,horse,human,macaque,mouse,panda,rabbit,rat, lincRNA processed_transcript A549@4.11933,AG04450@3.51281,BJ@2.77984,GM12878@8.30656,H1HESC@3.64013,HELAS3@2.94006,HEPG2@2.197,HMEC@0.781376,HSMM@0.898006,HUVEC@1.81421,K562@3.00162,MCF7@5.79445,NHEK@2.62686,NHLF@0.73559,SKNSHRA@3.91716, 0 0 0 0 ENSG00000251136.2 ENST00000519854.1 chr8:90629222-90635433 2 282 5927 intergenic 0.48 0 0,0,1 0 0,0,0 0 9.21039311624768 184.384 20.3404255319149 20.202125864687 163.347 0 20.2375569428041 150.783 0 1 chimp,human, lincRNA processed_transcript A549@4.11933,AG04450@3.51281,BJ@2.77984,GM12878@8.30656,H1HESC@3.64013,HELAS3@2.94006,HEPG2@2.197,HMEC@0.781376,HSMM@0.898006,HUVEC@1.81421,K562@3.00162,MCF7@5.79445,NHEK@2.62686,NHLF@0.73559,SKNSHRA@3.91716, 0 0 0 0 ENSG00000251136.2 ENST00000524190.1 chr8:90640394-90769422 3 380 128644 intergenic -4.41 0 0,1,0 0 0,0,0 0 3.22467429495351 63.772 0 4.73753925562016 65.682 0 6.72091974752029 77.77 0 0 cat,chimp,human,macaque,marmoset,orangutan, lincRNA processed_transcript A549@4.11933,AG04450@3.51281,BJ@2.77984,GM12878@8.30656,H1HESC@3.64013,HELAS3@2.94006,HEPG2@2.197,HMEC@0.781376,HSMM@0.898006,HUVEC@1.81421,K562@3.00162,MCF7@5.79445,NHEK@2.62686,NHLF@0.73559,SKNSHRA@3.91716, 0 0 0 0 ENSG00000251136.2 ENST00000518771.1 chr8:90729627-90733428 1 3801 0 intergenic -2.03 1 0,0,1 0 0,0,0 0 0 0 4.76295711654828 0 0 7.0073664825046 0 0 1 1 chimp,human,macaque,marmoset,orangutan, lincRNA TEC A549@4.11933,AG04450@3.51281,BJ@2.77984,GM12878@8.30656,H1HESC@3.64013,HELAS3@2.94006,HEPG2@2.197,HMEC@0.781376,HSMM@0.898006,HUVEC@1.81421,K562@3.00162,MCF7@5.79445,NHEK@2.62686,NHLF@0.73559,SKNSHRA@3.91716, 0 0 0 0 ENSG00000251136.2 ENST00000504145.1 chr8:90729656-90769939 5 1567 38708 intergenic 4.12 1 1,1,1 1 0,0,0 0 0.698253590988943 82.176 3.83854499042757 1.24501395060453 86.746 3.96681557115507 2.68290792601013 95.204 0 0 chimp,horse,human,orangutan, lincRNA processed_transcript A549@4.11933,AG04450@3.51281,BJ@2.77984,GM12878@8.30656,H1HESC@3.64013,HELAS3@2.94006,HEPG2@2.197,HMEC@0.781376,HSMM@0.898006,HUVEC@1.81421,K562@3.00162,MCF7@5.79445,NHEK@2.62686,NHLF@0.73559,SKNSHRA@3.91716, 0 0 0 0 ENSG00000251136.2 ENST00000521996.1 chr8:90733132-90737158 3 912 3110 intergenic 4.12 1 0,0,1 0 0,0,0 0 0 0 0 1.90996784565916 3.72 0 1.96655948553055 3.885 0 0 chimp,dog,human,macaque,marmoset,orangutan, lincRNA processed_transcript A549@4.11933,AG04450@3.51281,BJ@2.77984,GM12878@8.30656,H1HESC@3.64013,HELAS3@2.94006,HEPG2@2.197,HMEC@0.781376,HSMM@0.898006,HUVEC@1.81421,K562@3.00162,MCF7@5.79445,NHEK@2.62686,NHLF@0.73559,SKNSHRA@3.91716, 0 0 0 0 ENSG00000251136.2 ENST00000523995.1 chr8:90733172-90734578 2 765 639 intergenic -6.18 1 0,0,1 0 0,0,0 0 0 0 0 0 0 0 0 0 0 0 chimp,guinea_pig,human,macaque,marmoset,orangutan,panda,pig, lincRNA retained_intron A549@4.11933,AG04450@3.51281,BJ@2.77984,GM12878@8.30656,H1HESC@3.64013,HELAS3@2.94006,HEPG2@2.197,HMEC@0.781376,HSMM@0.898006,HUVEC@1.81421,K562@3.00162,MCF7@5.79445,NHEK@2.62686,NHLF@0.73559,SKNSHRA@3.91716, 0 0 0 0 ENSG00000251136.2 ENST00000523859.1 chr8:90768463-90769592 2 694 433 intergenic -4.41 0 0,1,0 1 0,0,0 0 0 82.176 3.30691642651297 0 86.746 3.35878962536023 0 95.204 0 1 chimp,human,marmoset,orangutan, lincRNA processed_transcript A549@4.11933,AG04450@3.51281,BJ@2.77984,GM12878@8.30656,H1HESC@3.64013,HELAS3@2.94006,HEPG2@2.197,HMEC@0.781376,HSMM@0.898006,HUVEC@1.81421,K562@3.00162,MCF7@5.79445,NHEK@2.62686,NHLF@0.73559,SKNSHRA@3.91716, 1 96 0 0 ENSG00000253394.1 ENST00000523283.1 chr8:91233716-91400216 3 769 165727 intergenic 1.27 0 1,1,1 0 0,0,0 7.148244473342 12.3241415098324 0 0 9.81508142909726 1.984 0 11.8758922806785 2.072 0 0 chimp,horse,human,macaque,marmoset,orangutan, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0.003788,H1HESC@0,HELAS3@0.025521,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0.0344565,K562@12.8898,MCF7@0.013118,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000253394.1 ENST00000517400.1 chr8:91233716-91400373 4 789 165862 intergenic 1.27 0 0,1,0 0 0,0,0 6.96704689480355 12.3141105256177 0 0 9.80709264328176 1.984 0 11.866226139803 2.072 0 0 cat,chimp,horse,human,macaque,marmoset,orangutan, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0.003788,H1HESC@0,HELAS3@0.025521,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0.0344565,K562@12.8898,MCF7@0.013118,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000253394.1 ENST00000524361.1 chr8:91233745-91581546 4 616 347179 intergenic 1.27 0 0,1,0 0 0,0,0 8.9237012987013 10.1150213578586 0 0 7.94345280100467 1.984 0 10.0049426952667 2.072 1 1 chimp,human,macaque,marmoset,orangutan, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0.003788,H1HESC@0,HELAS3@0.025521,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0.0344565,K562@12.8898,MCF7@0.013118,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000253394.1 ENST00000523406.1 chr8:91233766-91400180 4 808 165600 intergenic 1.27 0 1,1,1 0 0,0,0 6.80321782178218 12.3335929951691 0 0 9.82260869565217 1.984 0 11.885 2.072 0 0 chimp,human,macaque,marmoset,orangutan,panda,pig, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0.003788,H1HESC@0,HELAS3@0.025521,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0.0344565,K562@12.8898,MCF7@0.013118,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000254180.1 ENST00000521975.1 chr8:91546839-91632298 5 573 84878 intergenic 3.09 0 0,0,0 0 0,0,0 0 6.5531939960885 0 0 5.93114823629209 0 0 6.88895826951625 2.115 0 0 chimp,horse,human,macaque,marmoset,orangutan, processed_transcript processed_transcript A549@0.018092,AG04450@0.0142315,BJ@0.0041865,GM12878@0.0040555,H1HESC@0.0621515,HELAS3@0.0198145,HEPG2@0,HMEC@0,HSMM@0.0071195,HUVEC@0,K562@0.0125155,MCF7@0.482117,NHEK@0.0109963,NHLF@0,SKNSHRA@0.0601105, 0 0 0 0 ENSG00000253799.1 ENST00000517505.1 chr8:91605032-91618293 3 735 12522 intergenic -7.85 0 0,0,0 0 0,0,0 6.58503401360544 1.39594314007347 0 16.6938775510204 1.8302188148858 0 15.9482993197279 3.68455518287813 0 0 1 chimp,human,orangutan, processed_transcript processed_transcript A549@0.0259645,AG04450@0.0108625,BJ@0.013155,GM12878@0,H1HESC@0.028418,HELAS3@0.025173,HEPG2@0.0146535,HMEC@0,HSMM@0,HUVEC@0.004736,K562@0.0073865,MCF7@0.231854,NHEK@0.00468967,NHLF@0,SKNSHRA@0.0128785, 0 0 0 0 ENSG00000246792.2 ENST00000501194.2 chr8:91658669-91663985 2 3471 1843 intronic 1.93 1 0,0,1 0 0,0,0 3.99366176894267 0 33 7.03226735811005 0 204.97 7.75914721982138 0 205.274 0 0 chimp,horse,human,macaque,marmoset,orangutan, lincRNA processed_transcript A549@0.108441,AG04450@0.105578,BJ@0.067128,GM12878@0.108749,H1HESC@1.41255,HELAS3@0.274076,HEPG2@0.203804,HMEC@0.004716,HSMM@0.0210785,HUVEC@0.0700765,K562@0.542317,MCF7@2.63891,NHEK@0.0254607,NHLF@0.0207875,SKNSHRA@0.150036, 0 0 0 0 ENSG00000246792.2 ENST00000519233.1 chr8:91658686-91660969 2 688 1593 intronic 1.93 1 0,0,0 0 0,0,0 20.1482558139535 0 23.65 25.1017441860465 0 194.583 28.1686046511628 0 193.425 0 0 cat,chimp,horse,human,macaque,marmoset,orangutan,pig, lincRNA processed_transcript A549@0.108441,AG04450@0.105578,BJ@0.067128,GM12878@0.108749,H1HESC@1.41255,HELAS3@0.274076,HEPG2@0.203804,HMEC@0.004716,HSMM@0.0210785,HUVEC@0.0700765,K562@0.542317,MCF7@2.63891,NHEK@0.0254607,NHLF@0.0207875,SKNSHRA@0.150036, 0 0 0 0 ENSG00000246792.2 ENST00000522132.1 chr8:91660976-91668826 3 359 7487 intronic -2.12 0 0,0,0 0 0,0,0 0 0 13.862 10.6518105849582 2.97529050353947 17.27 11.1866295264624 4.27834913850675 19.38 0 0 chimp,dog,elephant,horse,human,macaque,marmoset,orangutan,panda,pig, lincRNA processed_transcript A549@0.108441,AG04450@0.105578,BJ@0.067128,GM12878@0.108749,H1HESC@1.41255,HELAS3@0.274076,HEPG2@0.203804,HMEC@0.004716,HSMM@0.0210785,HUVEC@0.0700765,K562@0.542317,MCF7@2.63891,NHEK@0.0254607,NHLF@0.0207875,SKNSHRA@0.150036, 0 0 0 0 ENSG00000254251.1 ENST00000517884.1 chr8:91818702-91871468 4 829 51931 intronic -1.97 1 0,0,1 0 0,0,0 0 3.18312761163852 0 0 6.62469430590591 0 0 7.72399915272188 0 1 1 chimp,human,macaque,marmoset,orangutan, antisense antisense A549@0.006632,AG04450@0,BJ@0,GM12878@0.0070215,H1HESC@0.008912,HELAS3@0,HEPG2@0,HMEC@0.019662,HSMM@0.0148205,HUVEC@0,K562@0,MCF7@31.4261,NHEK@0.017067,NHLF@0,SKNSHRA@0.02787, 0 0 0 0 ENSG00000253250.1 ENST00000517562.1 chr8:91968167-91997485 6 3586 25722 exonic 0.68 0 0,1,0 1 0,0,1 70.9230340211935 8.86680662467926 0 157.086168432794 3.72191120441645 0 153.720858895706 6.60648472125029 3.888 0 0 cat,chimp,cow,dog,elephant,guinea_pig,horse,human,macaque,marmoset,mouse,opossum,orangutan,pig,rabbit,rat, antisense antisense A549@0.420985,AG04450@1.70361,BJ@1.22354,GM12878@0.224062,H1HESC@1.56489,HELAS3@0.023337,HEPG2@0.0400675,HMEC@0.233625,HSMM@1.15038,HUVEC@0.322817,K562@4.47443,MCF7@0.843217,NHEK@0.0982517,NHLF@1.76462,SKNSHRA@1.28896, 0 0 0 0 ENSG00000253358.1 ENST00000517920.1 chr8:92028816-92030883 2 396 1669 exonic 2.14 0 0,0,0 0 0,0,0 105.19696969697 5.65128819652486 0 142.59595959596 5.309766327142 0 137.568181818182 10.9802276812463 0 0 0 cat,chimp,cow,dog,elephant,guinea_pig,horse,human,macaque,marmoset,orangutan,pig, antisense antisense A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000254219.1 ENST00000519498.1 chr8:92054918-92056990 3 549 1519 intergenic 0.26 1 0,1,0 0 0,0,0 0 6.37261356155365 0 7.03825136612022 2.12244897959184 3.472 14.6174863387978 7.54707044107966 3.626 0 0 cat,chimp,dog,elephant,horse,human,macaque,marmoset,orangutan, antisense antisense A549@0,AG04450@0,BJ@0,GM12878@0.0084925,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000254219.1 ENST00000517410.1 chr8:92055696-92056961 2 319 944 intergenic 0.26 0 0,0,0 0 0,0,0 0 10.2542372881356 0 0 0 3.472 7.61755485893417 4.3760593220339 3.626 1 1 chimp,human,macaque,marmoset,orangutan, antisense retained_intron A549@0,AG04450@0,BJ@0,GM12878@0.0084925,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000253738.1 ENST00000522817.1 chr8:92072137-92082351 3 4272 5938 intergenic 2.50 1 0,1,0 1 0,0,0 0 0 19.964 1.11001872659176 6.93213203098686 51.78 1.83637640449438 12.1409565510273 58.629 1 1 chimp,human,macaque,marmoset,orangutan, antisense antisense A549@2.71372,AG04450@2.29928,BJ@1.29913,GM12878@2.78071,H1HESC@0.769996,HELAS3@3.61692,HEPG2@1.17126,HMEC@1.47095,HSMM@2.83136,HUVEC@0.630937,K562@4.43372,MCF7@5.36571,NHEK@2.03306,NHLF@2.32029,SKNSHRA@1.85947, 0 0 0 0 ENSG00000253738.1 ENST00000524003.1 chr8:92080139-92082417 2 2169 107 intergenic 2.50 1 1,1,1 1 0,0,0 0 0 19.964 2.18626094974643 6.95327102803738 82.38 5.07330567081604 7.26168224299065 94.149 0 0 cat,chimp,cow,dog,elephant,guinea_pig,horse,human,macaque,marmoset,orangutan,panda,pig,rabbit, antisense antisense A549@2.71372,AG04450@2.29928,BJ@1.29913,GM12878@2.78071,H1HESC@0.769996,HELAS3@3.61692,HEPG2@1.17126,HMEC@1.47095,HSMM@2.83136,HUVEC@0.630937,K562@4.43372,MCF7@5.36571,NHEK@2.03306,NHLF@2.32029,SKNSHRA@1.85947, 0 0 0 0 ENSG00000253901.1 ENST00000521199.1 chr8:92555152-92919847 4 560 364129 intergenic -0.47 0 0,0,0 0 0,0,0 0 32.1433942366579 156.5 0 32.3354140977511 50.107 0 33.451499331281 59.204 1 1 chimp,human,macaque,marmoset,orangutan, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000253901.1 ENST00000518416.1 chr8:92577208-92919681 4 573 341894 intergenic 0 0 0,0,0 0 0,0,0 80.3228621291449 32.1289697976566 156.5 51.087260034904 32.1729483407138 50.107 56.1151832460733 33.250396321667 55.837 1 1 chimp,human,macaque,marmoset,orangutan, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000253576.1 ENST00000522980.1 chr8:92988136-92989646 2 408 1100 exonic -5.68 0 0,0,0 0 0,0,0 128.745098039216 0 141.504 111.095588235294 6.88363636363636 82.192 111.468137254902 5.40909090909091 116.085 0 0 cat,chimp,cow,dog,elephant,guinea_pig,horse,human,macaque,marmoset,mouse,opossum,orangutan,panda,pig,rabbit, antisense antisense A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000253682.1 ENST00000518042.1 chr8:93415773-93425873 6 762 9328 intergenic 1.11 0 0,0,1 0 0,0,0 0.288713910761155 19.6095626072041 45.92 3.25459317585302 36.8263293310463 7.549 3.47769028871391 43.6531946826758 16.415 0 1 chimp,human,macaque,marmoset, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0.0095295, 0 0 0 0 ENSG00000253749.1 ENST00000523385.1 chr8:93433078-93434026 2 476 470 intergenic -4.50 0 0,1,0 0 0,0,0 0 0 0 23.1701680672269 5.42553191489362 1.53 23.8697478991597 5.63829787234043 4.47 0 0 chimp,cow,guinea_pig,horse,human,macaque,marmoset,orangutan,pig,rabbit, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000253371.1 ENST00000521955.1 chr8:93512811-93522044 3 611 8618 intergenic -3.70 0 0,0,0 0 0,0,0 218.212765957447 195.852401949408 41.665 158.299509001637 198.874216755628 42.402 149.630114566285 206.03945230912 44.435 0 0 cat,chimp,cow,guinea_pig,horse,human,macaque,marmoset,orangutan,panda,rat, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0.00968,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0.0264775,MCF7@0.059995,NHEK@0,NHLF@0,SKNSHRA@0.009058, 0 0 0 0 ENSG00000253634.1 ENST00000523284.1 chr8:93577671-93667722 5 582 89461 intergenic 6.43 1 0,1,1 0 0,0,0 126.719931271478 67.1260437509082 0 126.731958762887 200.751165312259 0 126.848797250859 208.154726640659 0 0 0 cat,chimp,cow,dog,elephant,guinea_pig,human,macaque,marmoset,mouse,orangutan,panda,pig,rabbit, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0.017862,K562@0.0262535,MCF7@0.0035025,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000253177.1 ENST00000522531.1 chr8:93681064-93689911 2 225 8620 intergenic -5.84 0 0,1,0 0 0,0,0 0 16.0538283062645 0 0 23.3682134570766 29.003 0 23.657192575406 29.678 1 1 chimp,human,macaque,marmoset,orangutan, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0.013088,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000253177.1 ENST00000521307.1 chr8:93681116-93691822 2 864 9840 intergenic -6.65 0 0,1,0 0 0,0,0 0 14.0634146341463 0 0 20.4709349593496 29.003 5.09606481481481 20.7240853658537 29.678 0 0 chimp,cow,dog,horse,human,macaque,marmoset,orangutan,panda,pig,rabbit, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0.013088,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000248858.2 ENST00000521230.1 chr8:93711970-93770770 3 404 58392 intergenic -6.01 1 0,0,1 0 0,0,0 0 59.2853473078504 0 0 53.7950575421291 0 0 53.8747773667626 0 0 0 chimp,cow,guinea_pig,horse,human,macaque,marmoset,orangutan,pig, antisense antisense A549@0.0837045,AG04450@0.223378,BJ@0.223944,GM12878@0.0998245,H1HESC@0.0827985,HELAS3@0.305721,HEPG2@0.312986,HMEC@0.011475,HSMM@0.0137655,HUVEC@0.29204,K562@3.50279,MCF7@0.422745,NHEK@0.161538,NHLF@0.036199,SKNSHRA@0.402562, 0 0 0 0 ENSG00000248858.2 ENST00000521148.1 chr8:93711978-93777806 3 493 65331 intergenic 3.67 1 0,0,1 0 0,0,0 0 52.9884740781558 0 0 48.0813243330119 0 0 48.1525768777456 0 0 0 chimp,guinea_pig,human,macaque,marmoset,orangutan,pig,rabbit, antisense antisense A549@0.0837045,AG04450@0.223378,BJ@0.223944,GM12878@0.0998245,H1HESC@0.0827985,HELAS3@0.305721,HEPG2@0.312986,HMEC@0.011475,HSMM@0.0137655,HUVEC@0.29204,K562@3.50279,MCF7@0.422745,NHEK@0.161538,NHLF@0.036199,SKNSHRA@0.402562, 0 0 0 0 ENSG00000248858.2 ENST00000504861.2 chr8:93725190-93889865 4 3417 161252 intergenic -0.80 0 1,1,1 1 0,0,0 17.4539069359087 45.2405985662193 0 6.86976880304361 43.976465408181 0 9.97892888498683 43.9476099521246 0 0 0 chimp,dog,human,macaque,marmoset,orangutan,panda, antisense antisense A549@0.0837045,AG04450@0.223378,BJ@0.223944,GM12878@0.0998245,H1HESC@0.0827985,HELAS3@0.305721,HEPG2@0.312986,HMEC@0.011475,HSMM@0.0137655,HUVEC@0.29204,K562@3.50279,MCF7@0.422745,NHEK@0.161538,NHLF@0.036199,SKNSHRA@0.402562, 0 0 0 0 ENSG00000254020.1 ENST00000518861.1 chr8:93735252-93737339 2 268 1817 intergenic -5.09 0 0,0,0 0 0,0,0 0 0 0 0 0 0 0 0 0 1 1 chimp,human,macaque,marmoset,orangutan, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000253577.1 ENST00000521317.1 chr8:93777930-93788679 3 433 10312 intergenic 0.51 1 0,0,1 0 0,0,0 0 0.567494181536074 0 0 1.7883048875097 0 0 2.9739138867339 0 0 1 chimp,human,macaque, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000248858.2 ENST00000523080.1 chr8:93887449-93891730 1 4281 0 intergenic -0.52 1 0,0,1 0 0,0,0 10.8243401074515 0 0 1.89932258818033 0 2.151 3.66035972903527 0 2.331 0 1 chimp,human,marmoset,orangutan, antisense TEC A549@0.0837045,AG04450@0.223378,BJ@0.223944,GM12878@0.0998245,H1HESC@0.0827985,HELAS3@0.305721,HEPG2@0.312986,HMEC@0.011475,HSMM@0.0137655,HUVEC@0.29204,K562@3.50279,MCF7@0.422745,NHEK@0.161538,NHLF@0.036199,SKNSHRA@0.402562, 0 0 0 0 ENSG00000253197.1 ENST00000523197.1 chr8:93895212-93977873 5 597 82056 exonic 2.83 0 0,0,0 0 0,0,0 34.6733668341709 30.9302183874427 361.646 29.1758793969849 36.5525616652043 421.095 35.0636515912898 37.4994028468363 405.733 0 0 chimp,cow,dog,elephant,guinea_pig,horse,human,macaque,marmoset,orangutan,panda,pig,rabbit, processed_transcript processed_transcript A549@0,AG04450@0,BJ@0.0059435,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000253197.1 ENST00000521203.1 chr8:93895213-93953520 6 555 57742 intronic -3.65 0 0,0,0 0 0,0,0 64.754954954955 38.6536489903363 361.646 114.769369369369 44.0354681167954 421.095 121.482882882883 44.9570330089017 405.733 0 0 chimp,cow,guinea_pig,human,macaque,marmoset,orangutan,panda, processed_transcript processed_transcript A549@0,AG04450@0,BJ@0.0059435,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000246662.2 ENST00000520513.1 chr8:94225531-94304914 2 303 79078 intergenic 0 1 0,0,1 0 0,0,0 298.947194719472 58.9809302207947 54.7 238.369636963696 46.3150433748956 26.423 163.072607260726 49.7090973469233 35.065 0 0 cat,chimp,cow,dog,elephant,guinea_pig,horse,human,macaque,marmoset,mouse,orangutan,panda,pig,rabbit,rat, lincRNA processed_transcript A549@0.002577,AG04450@0.0348455,BJ@0.013336,GM12878@0,H1HESC@0.012403,HELAS3@0,HEPG2@0.001113,HMEC@0,HSMM@0.001191,HUVEC@0.015681,K562@0.0232435,MCF7@0.0021245,NHEK@0.000689667,NHLF@0.0081215,SKNSHRA@0.0877755, 0 0 0 0 ENSG00000246662.2 ENST00000520096.1 chr8:94225539-94433108 6 784 206775 intergenic 4.03 1 0,1,1 0 0,0,0 251.658163265306 54.3103421593519 71.925 222.860969387755 48.7059364043042 28.986 182.136479591837 50.0031193326079 48.062 0 0 chimp,cow,elephant,guinea_pig,horse,human,macaque,marmoset,mouse,orangutan,pig,rabbit, lincRNA processed_transcript A549@0.002577,AG04450@0.0348455,BJ@0.013336,GM12878@0,H1HESC@0.012403,HELAS3@0,HEPG2@0.001113,HMEC@0,HSMM@0.001191,HUVEC@0.015681,K562@0.0232435,MCF7@0.0021245,NHEK@0.000689667,NHLF@0.0081215,SKNSHRA@0.0877755, 0 0 0 0 ENSG00000246662.2 ENST00000517785.1 chr8:94225556-94262951 2 262 37131 intergenic 0.12 1 0,0,1 0 0,0,0 220.824427480916 89.3617731814387 0 245.229007633588 66.8916808057957 0 132.969465648855 71.9787778406183 0 0 0 chimp,cow,dog,elephant,guinea_pig,horse,human,macaque,marmoset,mouse,orangutan,panda,pig,rabbit,rat, lincRNA processed_transcript A549@0.002577,AG04450@0.0348455,BJ@0.013336,GM12878@0,H1HESC@0.012403,HELAS3@0,HEPG2@0.001113,HMEC@0,HSMM@0.001191,HUVEC@0.015681,K562@0.0232435,MCF7@0.0021245,NHEK@0.000689667,NHLF@0.0081215,SKNSHRA@0.0877755, 0 0 0 0 ENSG00000253960.1 ENST00000517796.1 chr8:94228154-94247107 4 528 18419 intergenic -5.56 0 0,1,0 0 0,0,0 87.7575757575758 80.938215972637 40.754 109.435606060606 55.7153482816656 88.353 84.8806818181818 58.9762202073945 97.506 0 0 cat,chimp,cow,elephant,guinea_pig,horse,human,macaque,marmoset,orangutan,pig,rabbit, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000254089.1 ENST00000522598.1 chr8:94271895-94310204 3 258 38047 intergenic 3.88 0 0,0,0 0 0,0,0 274.127906976744 47.1303913580571 9.672 200.12015503876 42.4299156306673 67.436 278.31007751938 42.4600362709281 70.084 0 0 cat,chimp,cow,dog,elephant,guinea_pig,horse,human,macaque,marmoset,mouse,opossum,orangutan,panda,pig,rabbit,rat, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000246662.2 ENST00000501400.1 chr8:94358695-94712661 11 1903 352043 exonic 4.03 1 0,1,1 0 0,0,0 120.520231213873 34.8571566541587 52.476 95.0562270099842 33.1496124053027 153.106 84.320021019443 37.7918663345103 143.486 1 1 chimp,human,macaque,marmoset,orangutan, lincRNA processed_transcript A549@0.002577,AG04450@0.0348455,BJ@0.013336,GM12878@0,H1HESC@0.012403,HELAS3@0,HEPG2@0.001113,HMEC@0,HSMM@0.001191,HUVEC@0.015681,K562@0.0232435,MCF7@0.0021245,NHEK@0.000689667,NHLF@0.0081215,SKNSHRA@0.0877755, 0 0 0 0 ENSG00000253854.1 ENST00000520562.1 chr8:94731802-94733395 2 937 654 intronic -3.53 0 0,0,0 0 0,0,0 0 0 56.544 4.00960512273212 1.46177370030581 89.391 4.09284951974386 8.91743119266055 96.538 0 0 chimp,dog,human,macaque,marmoset,orangutan, antisense antisense A549@0.035491,AG04450@0.0804605,BJ@0.008233,GM12878@0.046018,H1HESC@0.0162205,HELAS3@0.00691,HEPG2@0.006342,HMEC@0.609322,HSMM@0.0066075,HUVEC@0.005552,K562@0.0237865,MCF7@0.0380895,NHEK@0.010504,NHLF@0.0114205,SKNSHRA@0.080143, 0 0 0 0 ENSG00000253722.1 ENST00000517998.1 chr8:94745444-94746250 2 694 110 exonic -8.31 0 0,1,1 0 0,0,0 525.304034582133 602 104.148 560.43227665706 956.972727272727 93.593 473.240634005764 317.272727272727 84.709 0 0 cat,chimp,cow,dog,elephant,guinea_pig,horse,human,macaque,marmoset,mouse,opossum,orangutan,panda,pig,rabbit,rat, antisense antisense A549@0.0366255,AG04450@0.033754,BJ@0.0070745,GM12878@0.0197035,H1HESC@0,HELAS3@0.012986,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0.0076735,K562@0.0076935,MCF7@0.005908,NHEK@0.002799,NHLF@0.103206,SKNSHRA@0.0115935, 0 0 0 0 ENSG00000253848.1 ENST00000523945.1 chr8:94753421-94756762 2 528 2811 intergenic -2.67 1 0,1,0 1 0,0,0 0 0 211.535 0 0.850231234436144 90.088 0 0.864461045891142 80.003 0 1 chimp,human,macaque,orangutan, antisense antisense A549@0.0420715,AG04450@0.062736,BJ@0.022909,GM12878@0.059447,H1HESC@0.0344665,HELAS3@0.100716,HEPG2@0.056151,HMEC@0.987664,HSMM@0.01983,HUVEC@0.0050385,K562@0.121429,MCF7@0.091471,NHEK@0.03559,NHLF@0.014726,SKNSHRA@0.0350485, 0 0 0 0 ENSG00000254057.1 ENST00000520962.1 chr8:94846682-94858971 2 526 11761 intergenic 0 0 0,0,0 0 0,0,0 104.243346007605 3.12949579117422 102.124 126.663498098859 3.03970750786498 70.54 105.281368821293 4.23603435082051 62.766 0 0 human, lincRNA lincRNA A549@0,AG04450@0.012735,BJ@0,GM12878@0,H1HESC@0.0281195,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0.004605,K562@0,MCF7@0,NHEK@0.014969,NHLF@0,SKNSHRA@0.104828, 3 10 0 0 ENSG00000253585.1 ENST00000522743.1 chr8:95109992-95116550 3 665 5889 intergenic 3.96 1 0,0,0 0 0,0,0 0 17.2166751570725 0 0 12.8631346578366 0 0 11.4815758193242 0 0 0 cat,chimp,dog,elephant,horse,human,macaque,orangutan,panda, lincRNA lincRNA A549@0.090903,AG04450@0.0033555,BJ@0,GM12878@0,H1HESC@0.026693,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0.0061605,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0.0028885,SKNSHRA@0.006793, 0 0 0 0 ENSG00000254315.1 ENST00000521010.1 chr8:95545856-95546619 2 489 272 intronic -9.51 0 0,0,0 0 0,0,0 0 0 0 0 0 0 36.0449897750511 118.941176470588 3.402 0 0 chimp,elephant,horse,human,macaque,marmoset,orangutan,pig, antisense antisense A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000253704.1 ENST00000523011.1 chr8:95565950-95581973 2 1787 14234 intergenic 1.66 0 0,1,0 1 0,0,0 0 0 51.66 4.02462227196419 1.23795138401012 71.093 106.020705092334 17.9659969088099 73.823 1 1 chimp,human,macaque,marmoset,orangutan, processed_transcript processed_transcript A549@0.0315555,AG04450@0.030648,BJ@0.0381315,GM12878@0.381274,H1HESC@0.0279255,HELAS3@0.053509,HEPG2@0.077473,HMEC@0.027465,HSMM@0.0439665,HUVEC@0.0268835,K562@0.130495,MCF7@0.0695285,NHEK@0.0443823,NHLF@0.02597,SKNSHRA@0.102059, 0 0 0 0 ENSG00000254307.1 ENST00000521706.1 chr8:95803871-95805191 2 794 524 exonic -34.60 0 0,0,0 0 0,0,0 0 0 0 24.6171284634761 0 8.798 14.4861460957179 0 12.319 0 0 chimp,cow,dog,elephant,guinea_pig,horse,human,macaque,marmoset,orangutan,panda,pig,rabbit, antisense antisense A549@0,AG04450@0.001863,BJ@0.0069315,GM12878@0,H1HESC@0,HELAS3@0.0058285,HEPG2@0.004244,HMEC@0.003404,HSMM@0,HUVEC@0,K562@0.0039715,MCF7@0,NHEK@0.00212233,NHLF@0,SKNSHRA@0.009309, 0 0 0 0 ENSG00000254307.1 ENST00000510185.2 chr8:95804460-95805334 2 500 372 exonic -12.89 0 0,1,1 0 0,0,0 0 0 0 0 0 8.798 0 0 12.319 0 0 chimp,human,orangutan,pig, antisense antisense A549@0,AG04450@0.001863,BJ@0.0069315,GM12878@0,H1HESC@0,HELAS3@0.0058285,HEPG2@0.004244,HMEC@0.003404,HSMM@0,HUVEC@0,K562@0.0039715,MCF7@0,NHEK@0.00212233,NHLF@0,SKNSHRA@0.009309, 0 0 0 0 ENSG00000254307.1 ENST00000518613.1 chr8:95804511-95806064 2 1201 350 exonic -6.16 0 1,1,1 0 0,0,0 0 0 0 7.3255620316403 0 2.76 10.2572855953372 0 18.817 0 0 chimp,cow,dog,elephant,guinea_pig,horse,human,macaque,marmoset,mouse,orangutan,panda,pig,rabbit, antisense antisense A549@0,AG04450@0.001863,BJ@0.0069315,GM12878@0,H1HESC@0,HELAS3@0.0058285,HEPG2@0.004244,HMEC@0.003404,HSMM@0,HUVEC@0,K562@0.0039715,MCF7@0,NHEK@0.00212233,NHLF@0,SKNSHRA@0.009309, 0 0 0 0 ENSG00000253878.1 ENST00000523905.1 chr8:95962265-95963624 3 706 649 intronic -2.06 1 0,0,1 0 0,0,0 0 0 36.42 0 0 80.864 0 0 81.457 0 0 cat,chimp,human,macaque,marmoset,orangutan, sense_intronic sense_intronic A549@0.10316,AG04450@0.102569,BJ@0.090842,GM12878@0.310625,H1HESC@0.110946,HELAS3@0.110183,HEPG2@0.103265,HMEC@0.027968,HSMM@0.138879,HUVEC@0.107963,K562@0.083822,MCF7@0.118628,NHEK@0.0792637,NHLF@0.556745,SKNSHRA@0.170429, 0 0 0 0 ENSG00000253878.1 ENST00000519034.1 chr8:95962453-95963624 3 446 721 intronic -2.06 1 0,0,1 0 0,0,0 0 0 36.42 0 0 70.479 0 0 73.845 0 0 chimp, sense_intronic sense_intronic A549@0.10316,AG04450@0.102569,BJ@0.090842,GM12878@0.310625,H1HESC@0.110946,HELAS3@0.110183,HEPG2@0.103265,HMEC@0.027968,HSMM@0.138879,HUVEC@0.107963,K562@0.083822,MCF7@0.118628,NHEK@0.0792637,NHLF@0.556745,SKNSHRA@0.170429, 0 0 0 0 ENSG00000245080.3 ENST00000501164.2 chr8:96079036-96085148 2 2630 3480 intronic 1.32 1 0,0,1 0 0,0,0 10.8467680608365 2.14942528735632 0 4.72395437262357 4.10114942528736 1.984 5.5574144486692 6.33764367816092 2.072 1 1 chimp,human,macaque,marmoset,orangutan, lincRNA processed_transcript A549@0,AG04450@0,BJ@0,GM12878@0.972237,H1HESC@0.0022115,HELAS3@0.001717,HEPG2@0.029117,HMEC@0.003111,HSMM@0,HUVEC@0.0011305,K562@0.0506005,MCF7@0.150246,NHEK@0.0272467,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000245080.3 ENST00000517864.1 chr8:96081152-96085410 2 564 3692 intronic -0.42 0 0,1,0 0 0,0,0 0 2.02600216684724 0 0 3.86565547128927 1.984 0 5.9737269772481 2.072 0 1 chimp,human,macaque,orangutan, lincRNA processed_transcript A549@0,AG04450@0,BJ@0,GM12878@0.972237,H1HESC@0.0022115,HELAS3@0.001717,HEPG2@0.029117,HMEC@0.003111,HSMM@0,HUVEC@0.0011305,K562@0.0506005,MCF7@0.150246,NHEK@0.0272467,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000254248.1 ENST00000518598.1 chr8:96083960-96100152 4 790 15396 intronic 4.34 0 0,0,0 0 0,0,0 0 0 4.84 8.47594936708861 0.128864640166277 0 9.29620253164557 20.9958430761237 0 1 1 chimp,human,macaque,marmoset,orangutan, antisense antisense A549@0,AG04450@0,BJ@0,GM12878@0.15982,H1HESC@0,HELAS3@0,HEPG2@0.00631,HMEC@0,HSMM@0,HUVEC@0,K562@0.0101635,MCF7@0.016474,NHEK@0.003264,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000253773.1 ENST00000517655.1 chr8:96216684-96444894 3 559 227647 encompassing 0.27 0 0,0,0 0 0,0,0 0 23.5439166780146 0 0 23.9824772564541 0 0 25.5409164188415 0 1 1 chimp,human,macaque,marmoset,orangutan, processed_transcript processed_transcript A549@0,AG04450@0.008157,BJ@0,GM12878@0.0208065,H1HESC@0,HELAS3@0.0041585,HEPG2@0.0374285,HMEC@0,HSMM@0,HUVEC@0.0065265,K562@0.050794,MCF7@0.076379,NHEK@0.0146563,NHLF@0,SKNSHRA@0.0440645, 0 0 0 0 ENSG00000253351.1 ENST00000523171.1 chr8:96219235-96228602 3 516 8847 intergenic 0.29 0 0,0,1 0 0,0,0 0 0 0 0 1.68090878263818 0 0 2.21702271956595 0 0 0 chimp,elephant,human,macaque,marmoset,orangutan, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0.02863,HELAS3@0.015341,HEPG2@0.004105,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000253773.1 ENST00000521905.1 chr8:96281064-96665938 5 612 384254 intronic 2.33 0 0,1,0 1 0,0,0 0 26.180791872043 2.536 15.9019607843137 27.7680778859817 0 16.281045751634 29.8533964513057 0 0 0 chimp,cow,dog,elephant,guinea_pig,horse,human,macaque,marmoset,mouse,orangutan,pig,rat, processed_transcript processed_transcript A549@0,AG04450@0.008157,BJ@0,GM12878@0.0208065,H1HESC@0,HELAS3@0.0041585,HEPG2@0.0374285,HMEC@0,HSMM@0,HUVEC@0.0065265,K562@0.050794,MCF7@0.076379,NHEK@0.0146563,NHLF@0,SKNSHRA@0.0440645, 0 0 0 0 ENSG00000253773.1 ENST00000517437.1 chr8:96444865-96822364 4 452 377041 intergenic 3.85 0 0,0,1 0 0,0,0 0 32.2551154914187 0 10.1548672566372 32.0890858023398 0 7.17920353982301 34.158462872738 2.227 0 0 cat,chimp,cow,dog,elephant,guinea_pig,human,macaque,marmoset,orangutan,pig,rabbit, processed_transcript processed_transcript A549@0,AG04450@0.008157,BJ@0,GM12878@0.0208065,H1HESC@0,HELAS3@0.0041585,HEPG2@0.0374285,HMEC@0,HSMM@0,HUVEC@0.0065265,K562@0.050794,MCF7@0.076379,NHEK@0.0146563,NHLF@0,SKNSHRA@0.0440645, 0 0 0 0 ENSG00000253872.1 ENST00000519366.1 chr8:96517634-96539752 5 2120 19990 intergenic -2.42 1 0,0,0 0 0,0,0 34.6599056603774 37.568384192096 11.925 19.3462264150943 23.3479739869935 0 22.8 28.4911455727864 1.904 0 0 chimp,cow,elephant,guinea_pig,human,macaque,marmoset,orangutan,panda,rabbit, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0.0026255,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0.0017605,HUVEC@0,K562@0,MCF7@0,NHEK@0.00275033,NHLF@0,SKNSHRA@0.0101925, 0 0 0 0 ENSG00000248762.2 ENST00000505564.2 chr8:96998336-97005331 2 939 6054 intergenic -6.59 1 0,0,0 0 0,0,0 0 0 0 0 0.941526263627354 4.208 0 1.71110009910803 5.56 0 0 NA lincRNA lincRNA A549@0,AG04450@0,BJ@0.015209,GM12878@0,H1HESC@0,HELAS3@0.0169225,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0.028139,K562@0.361542,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000254224.1 ENST00000520575.1 chr8:97247655-97250262 3 379 2224 exonic -5.34 0 0,1,1 0 0,0,0 0 0 0 25.1108179419525 5.22796762589928 3.57 25.9841688654354 5.32419064748201 3.71 0 0 chimp,cow,elephant,guinea_pig,horse,human,macaque,marmoset,orangutan,panda,rabbit, antisense antisense A549@0.0289725,AG04450@0.011735,BJ@0,GM12878@0.0412345,H1HESC@0,HELAS3@0.036303,HEPG2@0.0278875,HMEC@0,HSMM@0.028094,HUVEC@0.015581,K562@0.0863595,MCF7@0.0160275,NHEK@0.0236207,NHLF@0.0203175,SKNSHRA@0.026448, 0 0 0 0 ENSG00000254071.1 ENST00000517541.1 chr8:98703444-98711664 2 399 7819 intronic 0 0 0,0,1 0 0,0,0 0 13.9735260263461 266.064 0 17.9997442128149 228.43 0 16.7275866479089 153.743 0 0 cat,chimp,cow,dog,elephant,horse,human,macaque,marmoset,orangutan,panda,pig,rabbit, antisense antisense A549@0,AG04450@0.011179,BJ@0,GM12878@0.007293,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000245970.2 ENST00000501016.2 chr8:99053954-99056349 2 1987 406 exonic -4.37 0 0,1,0 0 0,0,0 74.7931555108203 0 0 92.9099144438853 0 0 103.969803724207 0 0 0 0 chimp,guinea_pig,human,macaque,marmoset,orangutan,panda, antisense antisense A549@0.051289,AG04450@0.0861855,BJ@0.014769,GM12878@0.045133,H1HESC@0.001494,HELAS3@0.0341585,HEPG2@0.0107575,HMEC@0,HSMM@0.0301655,HUVEC@0.0105005,K562@0.077908,MCF7@0.003055,NHEK@0.0163937,NHLF@0.00194,SKNSHRA@0.0731085, 0 0 0 0 ENSG00000254267.1 ENST00000518704.1 chr8:99383583-99400475 3 432 16456 intergenic 1.72 0 0,0,1 0 0,0,0 59.6550925925926 9.14936801166748 0 52.8101851851852 6.76744044725328 0 59.9097222222222 9.65647788040836 0 0 0 chimp,dog,horse,human,macaque,marmoset,orangutan,panda,pig, lincRNA lincRNA A549@0.0624375,AG04450@0.0392645,BJ@0.0795855,GM12878@0.0175,H1HESC@0,HELAS3@0.031166,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0.080507,K562@0,MCF7@0.0795135,NHEK@0.023214,NHLF@0,SKNSHRA@0.0531925, 0 0 0 0 ENSG00000253911.1 ENST00000517397.1 chr8:99615481-99618568 2 299 2786 intronic -11.33 0 0,1,1 0 0,0,0 0 0 0 0 0 0 0 0 0 1 1 chimp,human,macaque,marmoset,orangutan, antisense antisense A549@0,AG04450@0,BJ@0,GM12878@0.009716,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0.0088715,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000229625.3 ENST00000420417.3 chr8:99973656-99980512 3 461 6391 intergenic -0.43 0 0,0,0 0 0,0,0 0 116.054451572524 43.68 9.45770065075922 104.164762947895 45.74 21.6312364425163 98.0112658425912 53.482 1 1 chimp,human,macaque,marmoset,orangutan, lincRNA lincRNA A549@0.00669,AG04450@0,BJ@0.101892,GM12878@0,H1HESC@0.0128095,HELAS3@0.015111,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0.0176265,NHEK@0.01385,NHLF@0,SKNSHRA@0, 1 96 0 0 ENSG00000253948.1 ENST00000521696.1 chr8:100008991-100025272 2 378 15901 intergenic -4.28 0 1,1,1 1 0,0,0 0 35.0544619835231 76.545 15.3968253968254 47.4656939815106 90.101 15.1216931216931 66.7480661593611 108.561 1 1 chimp,human,macaque,marmoset,orangutan, processed_transcript processed_transcript A549@0.304152,AG04450@0.323277,BJ@0.257219,GM12878@0.377548,H1HESC@0.242086,HELAS3@0.370544,HEPG2@0.274054,HMEC@0.155604,HSMM@0.467735,HUVEC@0.0856775,K562@1.09787,MCF7@0.39041,NHEK@0.40687,NHLF@0.285438,SKNSHRA@0.556226, 0 0 0 0 ENSG00000253562.1 ENST00000520844.1 chr8:100103966-100106288 2 491 1829 intronic -4.01 0 0,1,0 0 0,0,0 58.1792260692464 64.8250410060142 242.282 72.928716904277 101.826134499727 211.295 76.0244399185336 79.5669764898852 214.265 0 0 cat,chimp,cow,dog,elephant,guinea_pig,horse,human,macaque,marmoset,orangutan,panda,pig,rabbit, antisense antisense A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000253532.1 ENST00000523226.1 chr8:100131580-100132809 2 593 634 intronic -16.66 0 0,0,0 0 0,0,0 16.6947723440135 0 0 0 0 0 0 0 0 1 1 chimp,human,macaque,marmoset,orangutan, sense_intronic sense_intronic A549@0.0870195,AG04450@0.029472,BJ@0.0226905,GM12878@0.0618405,H1HESC@0.0049185,HELAS3@0.0105255,HEPG2@0.0454375,HMEC@0,HSMM@0,HUVEC@0.017459,K562@0.0231785,MCF7@0,NHEK@0.00265,NHLF@0.314173,SKNSHRA@0.0229485, 0 0 0 0 ENSG00000253539.1 ENST00000523658.1 chr8:100808843-100811415 2 646 1924 intronic -0.15 0 0,0,0 0 0,0,0 128.934984520124 220.607588357588 263.509 151.639318885449 166.101871101871 350.527 130.030959752322 129.372661122661 347.484 0 0 chimp,cow,human,macaque,marmoset,orangutan,pig, antisense antisense A549@0.045022,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0.0075805,MCF7@0.162702,NHEK@0,NHLF@0,SKNSHRA@0.0105165, 0 0 0 0 ENSG00000253217.1 ENST00000519566.1 chr8:101349823-101362935 2 544 12566 intergenic -7.13 0 0,0,1 0 0,0,0 0 12.8226961642527 90.858 0 18.9372911029763 57.793 0 22.0358904981697 303.288 0 0 cat,chimp,human,macaque,marmoset,rabbit, lincRNA lincRNA A549@0.246931,AG04450@0,BJ@0,GM12878@0,H1HESC@0.053914,HELAS3@1.94466,HEPG2@0.220558,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0.003682,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000253824.1 ENST00000519844.1 chr8:101393488-101426687 3 641 32554 intergenic -0.33 0 0,1,0 0 0,0,0 0 6.56604411132273 6.66 6.45865834633385 8.07857713337839 2.893 7.02652106084243 9.53194691896541 2.992 0 0 cat,chimp,cow,dog,horse,human,macaque,marmoset,orangutan,panda,rabbit, lincRNA lincRNA A549@0.0033705,AG04450@0,BJ@0,GM12878@0.0396005,H1HESC@0,HELAS3@0.252473,HEPG2@0.0381205,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0.0031925,NHEK@0,NHLF@0.00303,SKNSHRA@0, 0 0 0 0 ENSG00000253824.1 ENST00000523870.1 chr8:101393702-101408441 3 489 14246 intergenic -2.55 0 0,0,0 0 0,0,0 0 1.22616874912256 9.89 1.22699386503067 5.65737750947634 10.543 1.2638036809816 7.66839814684823 14.461 1 1 chimp,human,macaque,marmoset,orangutan, lincRNA lincRNA A549@0.0033705,AG04450@0,BJ@0,GM12878@0.0396005,H1HESC@0,HELAS3@0.252473,HEPG2@0.0381205,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0.0031925,NHEK@0,NHLF@0.00303,SKNSHRA@0, 0 0 0 0 ENSG00000253842.1 ENST00000523554.1 chr8:101441062-101442896 2 637 1195 intergenic -1.04 0 0,0,1 0 0,0,0 0 0 24.938 23.8069073783359 0 38.115 21.7441130298273 0 43 0 0 cat,cow,dog,elephant,horse,human,macaque,orangutan,panda,pig,rabbit, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0.039219,H1HESC@0.0102655,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000253842.1 ENST00000522947.1 chr8:101441122-101443225 2 577 1524 intergenic 0.54 0 0,1,0 0 0,0,0 0 16.3635170603675 0 25.4540727902946 22.7814960629921 3.396 23.9358752166378 24.9829396325459 3.468 0 0 cat,cow,dog,elephant,horse,human,macaque,orangutan,panda,pig,rabbit, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0.039219,H1HESC@0.0102655,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000253666.1 ENST00000521851.1 chr8:101487903-101495381 2 556 6920 intergenic 3.79 0 0,1,0 0 0,0,0 0 2.10679190751445 0 0 2.68829479768786 0 0 3.12023121387283 0 0 0 chimp,cow,horse,human,macaque,marmoset,orangutan,panda, antisense antisense A549@0.0391115,AG04450@0,BJ@0,GM12878@6.20402,H1HESC@0,HELAS3@0.500736,HEPG2@0.78425,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0.029396,NHEK@0.008145,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000253666.1 ENST00000523831.1 chr8:101487918-101513376 2 329 25127 intergenic 1.71 1 1,1,1 0 0,0,0 0 2.22473832928722 0 0 5.67616508138656 0 0 5.60838938193975 0 0 0 cat,chimp,dog,guinea_pig,horse,human,macaque,marmoset,orangutan, antisense antisense A549@0.0391115,AG04450@0,BJ@0,GM12878@6.20402,H1HESC@0,HELAS3@0.500736,HEPG2@0.78425,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0.029396,NHEK@0.008145,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000254364.1 ENST00000523784.1 chr8:101504756-101505941 2 231 952 intergenic -2.41 0 0,1,1 0 0,0,0 0 0 10.35 0 0 8.545 0 0 8.621 0 1 human,macaque,orangutan, antisense antisense A549@0,AG04450@0,BJ@0,GM12878@0.023871,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000253740.1 ENST00000521625.1 chr8:101630809-101632221 3 446 962 intronic 2.83 1 0,0,0 0 0,0,0 0 12.9189189189189 9.24 0 0 18.087 0 0 22.45 0 1 chimp,human,marmoset,orangutan, antisense antisense A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000253740.1 ENST00000521535.1 chr8:101630810-101632208 3 313 1081 intronic 0.95 1 0,0,0 0 0,0,0 0 11.4967622571693 9.24 0 0 18.087 0 0 22.45 0 1 chimp,human,marmoset,orangutan, antisense antisense A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000248599.1 ENST00000514926.1 chr8:102064282-102088479 3 1945 22248 intergenic 2.02 0 0,0,1 0 0,0,0 0 8.05191477885653 90.063 0 6.11511147069399 67.706 0 7.00602301330457 71.977 0 1 chimp,human,macaque,orangutan, lincRNA lincRNA A549@0.0190065,AG04450@0.0053405,BJ@0,GM12878@0,H1HESC@0,HELAS3@0.102096,HEPG2@0.0378075,HMEC@0,HSMM@0.004225,HUVEC@0.0024965,K562@0.030642,MCF7@0.030164,NHEK@0.263734,NHLF@0.005943,SKNSHRA@0.061949, 0 0 0 0 ENSG00000253395.1 ENST00000524369.1 chr8:102134373-102138386 3 427 3582 intergenic 0.60 0 0,0,1 0 0,0,0 0 12.7428810720268 0 2.79859484777518 3.69095477386935 9.474 2.93911007025761 7.42350642099386 9.598 1 1 chimp,human,macaque,marmoset,orangutan, lincRNA lincRNA A549@0.467715,AG04450@0.0914955,BJ@0.096017,GM12878@0.004688,H1HESC@0.021158,HELAS3@0.572928,HEPG2@0.060868,HMEC@0.028567,HSMM@0,HUVEC@0.0609035,K562@0.115585,MCF7@0.396668,NHEK@0.018272,NHLF@0.036251,SKNSHRA@0.295063, 0 0 0 0 ENSG00000253355.1 ENST00000520411.1 chr8:102141215-102145473 2 496 3760 intergenic 1.08 0 0,0,0 0 0,0,0 0 3.7593085106383 0 150.058467741935 17.5811170212766 1.841 151.199596774194 16.3800531914894 1.855 0 1 chimp,human,orangutan, lincRNA retained_intron A549@0.011414,AG04450@0,BJ@0,GM12878@0,H1HESC@0.005177,HELAS3@0,HEPG2@0.0057065,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0.004206,NHEK@0,NHLF@0,SKNSHRA@0.0058175, 0 0 0 0 ENSG00000253355.1 ENST00000521884.1 chr8:102141222-102145714 3 475 4013 intergenic 1.08 0 0,0,1 0 0,0,0 0 3.52230251682033 0 0 16.4727136805383 2.104 0 15.3473710441067 2.12 0 1 chimp,human,orangutan, lincRNA lincRNA A549@0.011414,AG04450@0,BJ@0,GM12878@0,H1HESC@0.005177,HELAS3@0,HEPG2@0.0057065,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0.004206,NHEK@0,NHLF@0,SKNSHRA@0.0058175, 0 0 0 0 ENSG00000253737.1 ENST00000518090.1 chr8:102151893-102153157 3 470 790 intergenic -1.53 0 0,0,0 0 0,0,0 0 0 0 0 0 2.728 0 0 2.849 0 0 NA lincRNA lincRNA A549@0.0392135,AG04450@0,BJ@0.005116,GM12878@0,H1HESC@0.012566,HELAS3@0.015165,HEPG2@0,HMEC@0.017313,HSMM@0,HUVEC@0.103446,K562@0.009818,MCF7@0.0898385,NHEK@0,NHLF@0.0082505,SKNSHRA@0.00961, 0 0 0 0 ENSG00000253679.1 ENST00000523121.1 chr8:102273769-102275131 2 977 383 intergenic 1.46 1 0,1,0 0 0,0,0 0 0 5.5 0 0 0 0 0 1.88 0 0 chimp,horse,human,macaque,marmoset,orangutan, lincRNA lincRNA A549@0,AG04450@0,BJ@0.073911,GM12878@0,H1HESC@0,HELAS3@0.005422,HEPG2@0.0059855,HMEC@0,HSMM@0,HUVEC@0.0054555,K562@0,MCF7@0,NHEK@0,NHLF@0.003942,SKNSHRA@0, 0 0 0 0 ENSG00000253282.1 ENST00000524287.1 chr8:102299673-102306011 3 728 5606 intergenic -2.99 0 0,0,0 0 0,0,0 0 20.8785230110596 9.9 1.8543956043956 7.4343560470924 0 2.13461538461538 10.0909739564752 0 0 0 cat,chimp,horse,human,macaque,marmoset,orangutan,panda, lincRNA lincRNA A549@0,AG04450@0,BJ@0.023173,GM12878@0,H1HESC@0.0495505,HELAS3@0.0801775,HEPG2@0.007463,HMEC@0.03921,HSMM@0.283742,HUVEC@0,K562@0,MCF7@0.0195015,NHEK@0.0397127,NHLF@0.0687475,SKNSHRA@0.009322, 0 0 0 0 ENSG00000253644.1 ENST00000518612.1 chr8:102399527-102405414 3 405 5478 intergenic 6.09 1 0,0,0 0 0,0,0 0 0 0 0 6.57283680175246 0 0 8.96093464768164 0 1 1 chimp,human,macaque,marmoset,orangutan, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0.00312867,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000254084.1 ENST00000519793.1 chr8:102424101-102464680 2 576 40001 intergenic 2.69 0 0,1,0 0 0,0,0 0 11.8571285717857 40.6 3.43923611111111 11.5111622209445 96.816 3.51215277777778 12.4692132696683 99.126 0 0 chimp,cow,elephant,horse,human,macaque,marmoset,orangutan,panda, lincRNA lincRNA A549@0.0095575,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0.003909,HEPG2@0,HMEC@0.113346,HSMM@0,HUVEC@0,K562@0,MCF7@0.067181,NHEK@0.138626,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000254024.1 ENST00000520268.1 chr8:102473405-102504727 2 489 30831 exonic -0.91 0 0,1,0 1 0,0,0 71.2453987730061 11.8130777464241 413.595 77.0572597137014 9.42071291881548 325.413 79.0613496932515 10.8799584833447 322.944 0 0 chimp,cow,dog,human,macaque,marmoset,orangutan,panda, antisense antisense A549@0.0056255,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@4.43997,NHEK@0.036932,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000253629.1 ENST00000518749.1 chr8:102698775-102701321 2 359 2185 exonic -5.23 0 0,1,0 0 0,0,0 5.68245125348189 92.9844393592677 0 61.050139275766 83.2700228832952 0 61.3454038997214 78.1633867276888 0 0 0 cat,chimp,dog,elephant,horse,human,macaque,marmoset,mouse,orangutan,pig,rabbit,rat, antisense antisense A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0.008232,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0.0111385,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000251530.1 ENST00000509445.1 chr8:102996660-103006905 4 2346 7893 intronic 2.13 0 0,0,0 0 0,0,0 2.95439045183291 0 0 18.4565217391304 2.41961231470924 1.61 18.9045183290708 3.40478905359179 1.701 0 0 chimp,horse,human,orangutan, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0.047366,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0.0011835, 0 0 0 0 ENSG00000246263.2 ENST00000520820.1 chr8:103251622-103264402 3 797 11979 intergenic 0.05 1 1,1,1 1 0,0,0 0 2.33875949578429 10.241 0 2.2821604474497 26.208 1.47427854454203 18.5048000667835 25.75 0 1 chimp,human,macaque,orangutan, antisense antisense A549@0.568607,AG04450@0.118437,BJ@0.0598305,GM12878@1.48589,H1HESC@0.319712,HELAS3@0.479482,HEPG2@0.41699,HMEC@0.057561,HSMM@0.0517165,HUVEC@0.135162,K562@1.2475,MCF7@0.934978,NHEK@0.0817653,NHLF@0.0947185,SKNSHRA@0.688732, 0 0 0 0 ENSG00000246263.2 ENST00000499653.1 chr8:103255837-103265561 2 2046 7676 exonic 0.67 1 0,0,1 0 0,0,0 264.511730205279 0 0 203.201368523949 0.484627410109432 0 168.760997067449 0.865815528921313 0 0 0 chimp,cow,dog,elephant,guinea_pig,horse,human,macaque,marmoset,orangutan,panda, antisense antisense A549@0.568607,AG04450@0.118437,BJ@0.0598305,GM12878@1.48589,H1HESC@0.319712,HELAS3@0.479482,HEPG2@0.41699,HMEC@0.057561,HSMM@0.0517165,HUVEC@0.135162,K562@1.2475,MCF7@0.934978,NHEK@0.0817653,NHLF@0.0947185,SKNSHRA@0.688732, 0 0 0 0 ENSG00000253669.2 ENST00000522715.1 chr8:103817745-103821794 2 690 3357 intergenic -4.20 0 0,0,0 0 0,0,0 0 37.329162943104 46.949 7.19565217391304 54.3759308906762 25.824 7.33768115942029 58.44563598451 28.774 0 0 cat,chimp,cow,horse,human,macaque,marmoset,orangutan,panda, lincRNA lincRNA A549@3.00151,AG04450@0.276041,BJ@0.730609,GM12878@0.138332,H1HESC@0.006946,HELAS3@1.68761,HEPG2@3.71875,HMEC@0.863587,HSMM@0.999313,HUVEC@0.217165,K562@0.138789,MCF7@1.12638,NHEK@1.00099,NHLF@0.673582,SKNSHRA@0.810588, 0 0 0 0 ENSG00000253669.2 ENST00000405813.2 chr8:103819050-103822199 3 2766 379 intergenic 5.32 0 0,1,1 0 0,0,0 26.3058568329718 0 52.21 28.08568329718 41.844327176781 82.135 28.561460592914 60.9736147757256 82.874 0 0 cat,chimp,cow,horse,human,macaque,marmoset,orangutan, lincRNA lincRNA A549@3.00151,AG04450@0.276041,BJ@0.730609,GM12878@0.138332,H1HESC@0.006946,HELAS3@1.68761,HEPG2@3.71875,HMEC@0.863587,HSMM@0.999313,HUVEC@0.217165,K562@0.138789,MCF7@1.12638,NHEK@1.00099,NHLF@0.673582,SKNSHRA@0.810588, 0 0 0 0 ENSG00000253669.2 ENST00000517910.1 chr8:103819050-103822199 2 2768 379 intergenic 8.77 0 0,1,1 0 0,0,0 26.2868497109827 0 52.21 28.0653901734104 41.844327176781 82.135 28.540823699422 60.9736147757256 82.874 0 0 cat,chimp,cow,horse,human,macaque,marmoset,orangutan, lincRNA lincRNA A549@3.00151,AG04450@0.276041,BJ@0.730609,GM12878@0.138332,H1HESC@0.006946,HELAS3@1.68761,HEPG2@3.71875,HMEC@0.863587,HSMM@0.999313,HUVEC@0.217165,K562@0.138789,MCF7@1.12638,NHEK@1.00099,NHLF@0.673582,SKNSHRA@0.810588, 0 0 0 0 ENSG00000253385.1 ENST00000519337.1 chr8:103866683-103868303 2 768 850 intronic -4.40 0 0,0,0 0 0,0,0 48.09375 0 0 10.9830729166667 0 9.952 11.7044270833333 0 10.427 0 0 cat,chimp,cow,dog,horse,human,macaque,marmoset,orangutan,panda, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000253263.1 ENST00000523791.1 chr8:103904104-103905836 2 531 1199 intergenic -4.99 0 0,0,0 0 0,0,0 0 0 0 5.13747645951036 0 0 5.19962335216572 2.22935779816514 0 0 0 chimp,dog,horse,human,macaque,marmoset,orangutan,panda,rabbit, sense_intronic sense_intronic A549@0.0428175,AG04450@0.0563375,BJ@0.0252865,GM12878@0.195717,H1HESC@0.128881,HELAS3@0.0127785,HEPG2@0.007234,HMEC@0,HSMM@0.00681,HUVEC@0.0274295,K562@0.02398,MCF7@0.204754,NHEK@0.000980667,NHLF@0.000801,SKNSHRA@0.121872, 0 0 0 0 ENSG00000254281.1 ENST00000517983.1 chr8:103991013-104012412 4 559 20834 intergenic -1.34 0 0,0,0 0 0,0,0 86.8765652951699 0.900835173274455 0 37.08228980322 1.14826725544783 0 37.6940966010733 2.72943265815494 0 0 0 chimp,human,macaque,marmoset,mouse,orangutan, lincRNA lincRNA A549@0.030844,AG04450@0.0146995,BJ@0.017268,GM12878@0.364238,H1HESC@0.0370095,HELAS3@0.0041515,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0.0043185,K562@0,MCF7@0.018098,NHEK@0,NHLF@0,SKNSHRA@0.112894, 0 0 0 0 ENSG00000254236.1 ENST00000522416.1 chr8:104032415-104033656 2 412 827 exonic 4.25 0 0,0,0 0 0,0,0 37.7063106796116 14.4498186215236 0 28.0703883495146 54.4437726723095 16.096 31.247572815534 54.0665054413543 20.297 0 0 chimp,dog,elephant,human,macaque,marmoset,orangutan,panda,pig,rabbit, antisense antisense A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0.0180175,HELAS3@0,HEPG2@0.0052555,HMEC@0,HSMM@0,HUVEC@0,K562@0.0065835,MCF7@0.0222445,NHEK@0.003189,NHLF@0,SKNSHRA@0.0259875, 0 0 0 0 ENSG00000250929.2 ENST00000503718.2 chr8:104133260-104145194 2 554 11378 exonic 4.07 1 0,1,0 0 0,0,0 0 5.85691685709264 0 0 1.29433995429777 0 0 2.03638600808578 9.159 0 1 chimp,human,macaque,marmoset, antisense antisense A549@0,AG04450@0.0522345,BJ@0.008856,GM12878@0.175162,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0.007232,NHEK@0.004749,NHLF@0,SKNSHRA@0.0040875, 0 0 0 0 ENSG00000247081.2 ENST00000521102.1 chr8:104169218-104184255 3 610 14423 intronic 3.31 0 0,1,0 0 0,0,0 0 0.716910490189281 0 0 3.55356028565486 0 0 4.85224987866602 0 0 0 cat,chimp,elephant,horse,human,macaque,orangutan,panda,pig, lincRNA processed_transcript A549@0.15833,AG04450@1.49877,BJ@1.11723,GM12878@0.0589205,H1HESC@0.337913,HELAS3@0.166757,HEPG2@0.208304,HMEC@0.178064,HSMM@0.105063,HUVEC@0.228543,K562@0.005316,MCF7@1.07167,NHEK@0.223419,NHLF@0.431361,SKNSHRA@1.12864, 0 0 0 0 ENSG00000247081.2 ENST00000500902.1 chr8:104177737-104184368 2 991 5638 intronic 3.31 0 0,0,0 0 0,0,0 0 0 0 0 2.30099326002128 0 0 3.39216034054629 0 0 0 cat,chimp,dog,horse,human,macaque,orangutan,panda,pig, lincRNA processed_transcript A549@0.15833,AG04450@1.49877,BJ@1.11723,GM12878@0.0589205,H1HESC@0.337913,HELAS3@0.166757,HEPG2@0.208304,HMEC@0.178064,HSMM@0.105063,HUVEC@0.228543,K562@0.005316,MCF7@1.07167,NHEK@0.223419,NHLF@0.431361,SKNSHRA@1.12864, 0 0 0 0 ENSG00000247081.2 ENST00000499522.2 chr8:104178157-104298135 6 1347 118621 intronic 3.31 0 0,1,1 0 0,0,0 0 4.0293455627587 58.991 0 4.68036856880316 11.904 9.74164810690423 5.23562438354086 12.432 0 0 cat,chimp,human,macaque,orangutan,rabbit, lincRNA processed_transcript A549@0.15833,AG04450@1.49877,BJ@1.11723,GM12878@0.0589205,H1HESC@0.337913,HELAS3@0.166757,HEPG2@0.208304,HMEC@0.178064,HSMM@0.105063,HUVEC@0.228543,K562@0.005316,MCF7@1.07167,NHEK@0.223419,NHLF@0.431361,SKNSHRA@1.12864, 0 0 0 0 ENSG00000247081.2 ENST00000523614.1 chr8:104203192-104298133 2 549 94390 intronic -1.34 0 0,1,1 0 0,0,0 0 5.06372497086556 58.991 0 5.38140692870007 11.904 0 6.10471448246636 12.432 0 0 cat,chimp,cow,elephant,horse,human,macaque,marmoset,orangutan,pig,rabbit, lincRNA processed_transcript A549@0.15833,AG04450@1.49877,BJ@1.11723,GM12878@0.0589205,H1HESC@0.337913,HELAS3@0.166757,HEPG2@0.208304,HMEC@0.178064,HSMM@0.105063,HUVEC@0.228543,K562@0.005316,MCF7@1.07167,NHEK@0.223419,NHLF@0.431361,SKNSHRA@1.12864, 0 0 0 0 ENSG00000247081.2 ENST00000523915.1 chr8:104203457-104215098 2 289 11350 intronic -2.64 0 0,0,0 0 0,0,0 0 5.09303964757709 0 0 4.7920704845815 0 0 5.48969162995595 6.011 0 0 cat,chimp,elephant,horse,human,macaque,marmoset,orangutan,pig,rabbit, lincRNA processed_transcript A549@0.15833,AG04450@1.49877,BJ@1.11723,GM12878@0.0589205,H1HESC@0.337913,HELAS3@0.166757,HEPG2@0.208304,HMEC@0.178064,HSMM@0.105063,HUVEC@0.228543,K562@0.005316,MCF7@1.07167,NHEK@0.223419,NHLF@0.431361,SKNSHRA@1.12864, 0 0 0 0 ENSG00000253851.1 ENST00000523775.1 chr8:104240653-104241542 2 581 306 exonic -3.38 0 0,1,0 0 0,0,0 28.3993115318417 0 27.388 11.433734939759 0 50.112 10.7693631669535 0 54.821 0 0 cat,chimp,cow,dog,elephant,horse,human,macaque,marmoset,orangutan,panda,pig,rabbit, antisense antisense A549@0.003156,AG04450@0.0069075,BJ@0,GM12878@0,H1HESC@0.005833,HELAS3@0.010485,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0.00395,NHEK@0,NHLF@0,SKNSHRA@0.0516565, 0 0 0 0 ENSG00000247081.2 ENST00000519801.1 chr8:104258006-104298135 2 975 39152 intergenic 3.08 0 0,1,0 0 0,0,0 0 3.971674499387 58.991 0 3.87045361667348 11.904 0 5.18798528810789 12.432 0 0 chimp,horse,human,macaque,marmoset,orangutan, lincRNA processed_transcript A549@0.15833,AG04450@1.49877,BJ@1.11723,GM12878@0.0589205,H1HESC@0.337913,HELAS3@0.166757,HEPG2@0.208304,HMEC@0.178064,HSMM@0.105063,HUVEC@0.228543,K562@0.005316,MCF7@1.07167,NHEK@0.223419,NHLF@0.431361,SKNSHRA@1.12864, 0 0 0 0 ENSG00000247081.2 ENST00000521383.1 chr8:104258701-104310991 4 732 51552 exonic 4.38 0 0,1,1 1 0,0,0 0 5.00203677839851 33.579 0 4.25506284916201 41.24 1.92622950819672 5.50737119801366 49.726 0 0 chimp,elephant,horse,human,macaque,orangutan,panda, lincRNA processed_transcript A549@0.15833,AG04450@1.49877,BJ@1.11723,GM12878@0.0589205,H1HESC@0.337913,HELAS3@0.166757,HEPG2@0.208304,HMEC@0.178064,HSMM@0.105063,HUVEC@0.228543,K562@0.005316,MCF7@1.07167,NHEK@0.223419,NHLF@0.431361,SKNSHRA@1.12864, 0 0 0 0 ENSG00000247081.2 ENST00000523673.1 chr8:104279624-104298130 4 420 18080 intergenic -3.00 0 0,1,0 0 0,0,0 0 3.21946902654867 58.991 0 3.66006637168142 11.904 31.2428571428571 4.9133296460177 12.432 1 1 chimp,human,macaque,marmoset,orangutan, lincRNA processed_transcript A549@0.15833,AG04450@1.49877,BJ@1.11723,GM12878@0.0589205,H1HESC@0.337913,HELAS3@0.166757,HEPG2@0.208304,HMEC@0.178064,HSMM@0.105063,HUVEC@0.228543,K562@0.005316,MCF7@1.07167,NHEK@0.223419,NHLF@0.431361,SKNSHRA@1.12864, 0 0 0 0 ENSG00000247081.2 ENST00000520025.1 chr8:104280496-104298133 2 271 17364 intergenic 0 1 0,1,0 0 0,0,0 0 3.35222299009445 58.991 0 3.81098825155494 11.904 0 5.11592950932965 12.432 0 1 chimp,human,macaque,orangutan, lincRNA processed_transcript A549@0.15833,AG04450@1.49877,BJ@1.11723,GM12878@0.0589205,H1HESC@0.337913,HELAS3@0.166757,HEPG2@0.208304,HMEC@0.178064,HSMM@0.105063,HUVEC@0.228543,K562@0.005316,MCF7@1.07167,NHEK@0.223419,NHLF@0.431361,SKNSHRA@1.12864, 0 0 0 0 ENSG00000247081.2 ENST00000522856.1 chr8:104297961-104311000 2 592 12445 exonic 0 0 0,1,0 1 0,0,0 3.87837837837838 8.22547207713941 30.996 0 5.44965849738851 41.24 2.38175675675676 6.49224588188027 49.726 0 0 chimp,dog,horse,human,macaque,orangutan,panda, lincRNA processed_transcript A549@0.15833,AG04450@1.49877,BJ@1.11723,GM12878@0.0589205,H1HESC@0.337913,HELAS3@0.166757,HEPG2@0.208304,HMEC@0.178064,HSMM@0.105063,HUVEC@0.228543,K562@0.005316,MCF7@1.07167,NHEK@0.223419,NHLF@0.431361,SKNSHRA@1.12864, 0 0 0 0 ENSG00000253477.1 ENST00000517376.1 chr8:104495626-104511448 5 717 15097 intergenic 0.26 0 0,1,0 0 0,0,0 0 28.455256011128 25.812 0 36.3698085712393 35.668 0 74.6876862952905 35.751 1 1 chimp,human,macaque,marmoset,orangutan, antisense antisense A549@0,AG04450@0.0151405,BJ@0.0067035,GM12878@0,H1HESC@0.0937595,HELAS3@0,HEPG2@0,HMEC@0.011342,HSMM@0,HUVEC@0.0067355,K562@0,MCF7@0.0427315,NHEK@0,NHLF@0,SKNSHRA@0.110384, 0 0 0 0 ENSG00000253477.1 ENST00000523422.1 chr8:104495651-104513904 3 446 17803 intronic -2.55 0 0,1,0 0 0,0,0 104.405829596413 47.5877661068359 57.528 170.443946188341 53.0734707633545 75.494 319.531390134529 85.4867157220693 81.324 0 0 cat,chimp,dog,horse,human,macaque,marmoset,orangutan,panda,pig,rabbit,rat, antisense antisense A549@0,AG04450@0.0151405,BJ@0.0067035,GM12878@0,H1HESC@0.0937595,HELAS3@0,HEPG2@0,HMEC@0.011342,HSMM@0,HUVEC@0.0067355,K562@0,MCF7@0.0427315,NHEK@0,NHLF@0,SKNSHRA@0.110384, 0 0 0 0 ENSG00000254041.1 ENST00000518927.1 chr8:106155088-106200834 3 1028 44714 intergenic -0.51 1 0,0,0 0 0,0,0 435.803501945525 33.3384398622355 0 436.29766536965 31.5005367446437 0 415.803501945525 30.8822740081406 0 0 0 cat,chimp,cow,dog,elephant,guinea_pig,horse,human,macaque,marmoset,mouse,opossum,orangutan,panda,pig,platypus,rabbit, antisense antisense A549@0,AG04450@0.033225,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0.011271,SKNSHRA@0, 0 0 0 0 ENSG00000253420.1 ENST00000520588.1 chr8:106674580-106697993 3 646 22763 intronic 1.69 0 0,0,0 0 0,0,0 206.87306501548 37.2054650090058 0 113.252321981424 43.9643280762641 25.761 112.902476780186 48.02034002548 30.295 0 0 cat,chimp,cow,dog,horse,human,macaque,marmoset,mouse,orangutan,panda,pig,rabbit,rat, antisense antisense A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0.008406,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0.006998, 0 0 0 0 ENSG00000254141.1 ENST00000519805.1 chr8:106682219-106691259 3 713 8323 intronic -0.94 1 0,1,1 0 0,0,0 135.744740532959 65.5674636549321 43.375 123.335203366059 80.9704433497537 28.977 172.415147265077 85.2309263486723 28.344 0 0 cat,chimp,cow,dog,elephant,guinea_pig,horse,human,macaque,marmoset,mouse,orangutan,panda,pig,platypus,rabbit,rat, sense_intronic sense_intronic A549@0.010158,AG04450@1.29764,BJ@0.002564,GM12878@0,H1HESC@0.037283,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0.823308,K562@1.53553,MCF7@0,NHEK@0,NHLF@0.0180635,SKNSHRA@0.0040165, 0 0 0 0 ENSG00000251003.2 ENST00000520433.1 chr8:106792474-107072752 5 743 279527 intronic 0.28 0 0,1,1 0 0,0,0 62.1399730820996 16.1850125390392 0 24.6810228802153 13.9459408214591 0 53.9273216689098 15.5826020384435 0 0 0 chimp,cow,dog,elephant,guinea_pig,horse,human,macaque,marmoset,mouse,opossum,orangutan,platypus,rabbit,rat, antisense antisense A549@3.18401,AG04450@1.70383,BJ@0.231608,GM12878@0.317164,H1HESC@0,HELAS3@3.56963,HEPG2@0.632844,HMEC@0,HSMM@0,HUVEC@0.122199,K562@0.58038,MCF7@0.54511,NHEK@0.02099,NHLF@0.226073,SKNSHRA@3.94916, 0 0 0 0 ENSG00000251003.2 ENST00000524045.1 chr8:106797219-107072705 6 795 274681 intronic -3.85 0 0,1,0 0 0,0,0 23.8264150943396 16.4005482723596 0 30.5861635220126 29.9611258150364 0 78.8452830188679 15.5863893025 0 0 0 chimp,cow,dog,horse,human,macaque,marmoset,opossum,orangutan,pig, antisense antisense A549@3.18401,AG04450@1.70383,BJ@0.231608,GM12878@0.317164,H1HESC@0,HELAS3@3.56963,HEPG2@0.632844,HMEC@0,HSMM@0,HUVEC@0.122199,K562@0.58038,MCF7@0.54511,NHEK@0.02099,NHLF@0.226073,SKNSHRA@3.94916, 1 96 0 0 ENSG00000251003.2 ENST00000520594.1 chr8:106797232-107072695 5 629 274826 intronic -4.20 0 0,1,0 0 0,0,0 30.1144674085851 16.3918952355308 0 32.3529411764706 29.9610080560064 0 92.543720190779 15.5957187456791 0 0 0 chimp,dog,elephant,horse,human,macaque,marmoset,opossum,orangutan,pig,platypus,rabbit, antisense antisense A549@3.18401,AG04450@1.70383,BJ@0.231608,GM12878@0.317164,H1HESC@0,HELAS3@3.56963,HEPG2@0.632844,HMEC@0,HSMM@0,HUVEC@0.122199,K562@0.58038,MCF7@0.54511,NHEK@0.02099,NHLF@0.226073,SKNSHRA@3.94916, 0 0 0 0 ENSG00000251003.2 ENST00000518932.1 chr8:106797283-106924097 5 644 126162 intronic -15.53 0 0,0,0 0 0,0,0 29.4130434782609 34.074903695249 0 31.5993788819876 62.6260284396253 0 90.388198757764 30.4238915045735 0 0 0 cat,chimp,dog,elephant,guinea_pig,horse,human,macaque,marmoset,opossum,orangutan,panda,pig,platypus, antisense antisense A549@3.18401,AG04450@1.70383,BJ@0.231608,GM12878@0.317164,H1HESC@0,HELAS3@3.56963,HEPG2@0.632844,HMEC@0,HSMM@0,HUVEC@0.122199,K562@0.58038,MCF7@0.54511,NHEK@0.02099,NHLF@0.226073,SKNSHRA@3.94916, 0 0 0 0 ENSG00000251003.2 ENST00000509144.2 chr8:106809168-107072671 4 538 262959 intronic -3.90 0 0,1,0 0 0,0,0 0 16.0094197194239 0 0 13.0253955939899 0 0 14.5070714445978 0 0 0 chimp,horse,human,macaque,marmoset,orangutan, antisense antisense A549@3.18401,AG04450@1.70383,BJ@0.231608,GM12878@0.317164,H1HESC@0,HELAS3@3.56963,HEPG2@0.632844,HMEC@0,HSMM@0,HUVEC@0.122199,K562@0.58038,MCF7@0.54511,NHEK@0.02099,NHLF@0.226073,SKNSHRA@3.94916, 0 0 0 0 ENSG00000251003.2 ENST00000520078.1 chr8:106810319-107072689 3 497 261869 intronic -12.11 0 0,1,0 0 0,0,0 0 16.0760571125257 0 0 13.0796123252466 0 0 14.5674554834669 0 1 1 chimp,human,macaque,marmoset,orangutan, antisense retained_intron A549@3.18401,AG04450@1.70383,BJ@0.231608,GM12878@0.317164,H1HESC@0,HELAS3@3.56963,HEPG2@0.632844,HMEC@0,HSMM@0,HUVEC@0.122199,K562@0.58038,MCF7@0.54511,NHEK@0.02099,NHLF@0.226073,SKNSHRA@3.94916, 0 0 0 0 ENSG00000251003.2 ENST00000521622.1 chr8:106810555-107072719 4 390 261768 intronic -10.66 0 0,1,0 0 0,0,0 0 16.0822598636961 0 0 13.0846589346291 0 0 14.5730761590416 0 1 1 chimp,human,macaque,marmoset,orangutan, antisense antisense A549@3.18401,AG04450@1.70383,BJ@0.231608,GM12878@0.317164,H1HESC@0,HELAS3@3.56963,HEPG2@0.632844,HMEC@0,HSMM@0,HUVEC@0.122199,K562@0.58038,MCF7@0.54511,NHEK@0.02099,NHLF@0.226073,SKNSHRA@3.94916, 0 0 0 0 ENSG00000253526.1 ENST00000520870.1 chr8:106838798-106846266 2 443 7023 intergenic -1.26 0 0,0,0 0 0,0,0 0 58.4476719350705 0 0 53.4831268688595 0 0 52.1307133703545 0 0 0 chimp,horse,human,macaque,panda, lincRNA lincRNA A549@0,AG04450@0.067111,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0.0092475,HUVEC@0.0769375,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000253582.1 ENST00000518591.1 chr8:107532702-107669776 4 500 136568 intronic -3.56 0 0,1,0 1 0,0,0 0 4.79465174857946 54.813 2.868 6.99444232909613 131.663 2.916 8.59415822154531 107.825 1 1 chimp,human,macaque,marmoset,orangutan, antisense antisense A549@0.0054805,AG04450@0.0672895,BJ@0,GM12878@0.031904,H1HESC@0.215099,HELAS3@0.174529,HEPG2@0.0861515,HMEC@0.11374,HSMM@0.0131285,HUVEC@0.020378,K562@0.166204,MCF7@0.344245,NHEK@0.105029,NHLF@0.034714,SKNSHRA@0, 0 0 0 0 ENSG00000253754.1 ENST00000520037.1 chr8:109238429-109239773 2 445 897 intronic -3.93 0 0,1,0 0 0,0,0 0 0 18.403 0 0 0 0 0 0 0 0 NA antisense antisense A549@0,AG04450@0,BJ@0,GM12878@0.0111845,H1HESC@0.0066485,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0.0060975,MCF7@0,NHEK@0.0103157,NHLF@0,SKNSHRA@0.006221, 0 0 0 0 ENSG00000253949.1 ENST00000521504.1 chr8:109593291-109638996 3 379 45322 intergenic 3.11 0 0,0,0 0 0,0,0 0 21.0420105026257 0 76.0580474934037 28.6749481488019 0 72.2849604221636 29.6050041922245 0 0 0 cat,chimp,cow,dog,elephant,guinea_pig,horse,human,macaque,marmoset,panda,rabbit,rat, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0.144852,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000253796.1 ENST00000522244.1 chr8:109907258-110075646 5 476 167904 intergenic 0 0 0,1,0 0 0,0,0 0 2.14430269677911 0 13.0756302521008 3.54835501238803 6.944 12.9411764705882 5.20449185248714 8.745 0 0 chimp,elephant,human,macaque,marmoset,orangutan, antisense antisense A549@0.0057425,AG04450@0,BJ@0,GM12878@0.004148,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0.019751, 0 0 0 0 ENSG00000253796.1 ENST00000524134.1 chr8:109920446-109930842 5 481 9907 intergenic -5.21 0 0,0,0 0 0,0,0 0 2.55546583223983 0 12.9397089397089 1.3479358029676 0 12.8066528066528 2.74573533864944 0 0 0 cat,chimp,cow,dog,horse,human,macaque,marmoset,orangutan,rabbit, antisense antisense A549@0.0057425,AG04450@0,BJ@0,GM12878@0.004148,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0.019751, 0 0 0 0 ENSG00000250267.2 ENST00000504175.2 chr8:110310827-110328742 2 1641 16272 intronic -2.10 0 0,1,0 0 0,0,0 0 0.68952802359882 0 4.82449725776965 0.289577187807276 0 5.7885435709933 0.668203048180924 0 1 1 chimp,human,macaque,marmoset,orangutan, antisense antisense A549@0.0033625,AG04450@0.0019625,BJ@0.0118175,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0.003259,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0.0055235, 0 0 0 0 ENSG00000255402.1 ENST00000530667.1 chr8:110986172-110987010 2 551 285 exonic 8.40 0 0,1,0 0 0,0,0 148.958257713249 578 32.946 164.012704174229 600.424561403509 11.142 137.803992740472 550.021052631579 10.854 0 0 cat,chimp,cow,dog,elephant,guinea_pig,horse,human,macaque,marmoset,mouse,orangutan,panda,pig,platypus,rabbit,rat, antisense antisense A549@0,AG04450@0,BJ@0,GM12878@0.0042385,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000253956.1 ENST00000522896.1 chr8:111346972-111361836 3 770 14090 intergenic 6.76 1 0,0,0 0 0,0,0 0 0.669268985095813 0 0 4.24258339247693 0 0 6.58119233498936 0 0 0 chimp,horse,human,macaque,marmoset,orangutan, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0.021043,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000253122.1 ENST00000523264.1 chr8:111621470-111644623 3 199 22950 intergenic 0 0 0,1,0 0 0,0,0 0 0.776470588235294 0 0 2.42936819172113 45.526 9.44723618090452 3.27490196078431 48.252 0 0 NA lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000253717.1 ENST00000520749.1 chr8:111779092-111784988 2 474 5420 intergenic -0.35 0 0,0,0 0 0,0,0 0 1.88948339483395 0 0 3.78357933579336 0 0 4.95664206642066 0 0 0 chimp,dog,human,macaque,marmoset,orangutan,rabbit, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000253877.1 ENST00000524283.1 chr8:111949919-112039662 6 555 89178 intergenic 2.59 0 0,0,0 0 0,0,0 0 1.69935410078719 0 0 1.2061158581713 0 0 2.28069703290049 0 0 0 chimp,horse,human,macaque,marmoset,orangutan, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0.015998,HMEC@0,HSMM@0,HUVEC@0,K562@4.52635,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000253877.1 ENST00000523557.1 chr8:111995179-112039621 5 539 43895 intergenic -2.37 0 0,0,1 0 0,0,0 0 1.93500398678665 0 0 1.3404715799066 0 0 2.70691422713293 0 0 0 chimp,horse,human,macaque,marmoset,orangutan, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0.015998,HMEC@0,HSMM@0,HUVEC@0,K562@4.52635,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000253103.1 ENST00000519506.1 chr8:112111190-112248400 4 420 136784 intergenic -3.13 0 0,0,0 0 0,0,0 0 0.199760205872032 12.88 0 2.26850362615511 0 0 7.52430108784653 0 0 0 chimp,horse,human,macaque,marmoset,orangutan, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000253489.1 ENST00000522330.1 chr8:112191422-112192101 2 189 488 intergenic 3.99 0 0,0,0 0 0,0,0 0 0 0 0 0 0 0 0 0 0 0 chimp,dog,horse,human,marmoset,orangutan,panda, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000253103.1 ENST00000522778.1 chr8:112195521-112248432 2 564 52345 intergenic -3.39 0 0,0,0 0 0,0,0 0 0.227414270703983 12.88 0 2.63868564332792 0 0 12.5927404718693 0 0 0 chimp,human,macaque,marmoset,orangutan,panda, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000253434.1 ENST00000521904.1 chr8:112388868-112482846 4 473 93499 intergenic 1.38 0 0,0,0 0 0,0,0 0 0.435277382645804 0 0 1.77057508636456 0 0 3.75269254216623 0 0 1 chimp,human,macaque,orangutan, processed_transcript processed_transcript A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000253434.1 ENST00000521753.1 chr8:112388892-112527565 5 800 137865 intergenic 6.86 0 0,0,0 0 0,0,0 0 0.661734305298662 0 0 2.45009248177565 0 0 4.19147716969499 0 0 0 cat,chimp,cow,horse,human,macaque,marmoset,orangutan, processed_transcript processed_transcript A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000253434.1 ENST00000524236.1 chr8:112428744-112555202 5 465 125985 intergenic 1.65 0 0,0,0 0 0,0,0 0 1.3894352502282 0 0 3.29223320236536 0 0 4.3533357145692 0 0 1 chimp,human,macaque,orangutan, processed_transcript processed_transcript A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000254262.1 ENST00000522390.1 chr8:112754241-112768861 4 452 14162 intergenic -0.85 0 0,1,0 0 0,0,0 0 0 0 0 0 0 0 0 0 0 1 chimp,human,macaque,marmoset, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000254262.1 ENST00000517308.1 chr8:112757747-112769055 2 405 10901 intergenic 0.91 0 0,0,1 0 0,0,0 0 0 0 0 0 0 0 0 0 0 0 chimp,horse,human,macaque,marmoset,orangutan,pig, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000254339.1 ENST00000521523.1 chr8:115294296-115308036 3 863 12873 intergenic 3.81 0 0,0,0 0 0,0,0 0 0 0 0 0 0 0 2.20282762370854 0 0 0 human, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0.016011,H1HESC@98.6771,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0.0056785,HUVEC@0.0161265,K562@0,MCF7@0,NHEK@0.0131903,NHLF@0.01167,SKNSHRA@0, 0 0 0 0 ENSG00000254339.1 ENST00000523682.1 chr8:115294298-115308042 3 833 12907 intergenic 7.33 0 0,0,0 0 0,0,0 0 0 0 0 0 0 0 2.19702487022546 0 0 0 human, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0.016011,H1HESC@98.6771,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0.0056785,HUVEC@0.0161265,K562@0,MCF7@0,NHEK@0.0131903,NHLF@0.01167,SKNSHRA@0, 0 0 0 0 ENSG00000254339.1 ENST00000507929.2 chr8:115294301-115307853 3 694 12854 intergenic 3.81 0 0,0,0 0 0,0,0 0 0 0 0 0 0 0 2.20608370935117 0 0 0 human, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0.016011,H1HESC@98.6771,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0.0056785,HUVEC@0.0161265,K562@0,MCF7@0,NHEK@0.0131903,NHLF@0.01167,SKNSHRA@0, 0 0 0 0 ENSG00000254339.1 ENST00000520543.1 chr8:115294302-115308068 3 874 12888 intergenic 7.33 0 0,0,0 0 0,0,0 0 0 0 0 0 0 0 2.20026381129733 0 0 0 human, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0.016011,H1HESC@98.6771,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0.0056785,HUVEC@0.0161265,K562@0,MCF7@0,NHEK@0.0131903,NHLF@0.01167,SKNSHRA@0, 23 4 0 0 ENSG00000254339.1 ENST00000519248.1 chr8:115294365-115300225 3 727 5129 intergenic 3.81 0 0,0,0 0 0,0,0 0 0 0 0 0 0 0 0 0 0 0 human, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0.016011,H1HESC@98.6771,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0.0056785,HUVEC@0.0161265,K562@0,MCF7@0,NHEK@0.0131903,NHLF@0.01167,SKNSHRA@0, 0 0 0 0 ENSG00000227170.1 ENST00000415088.1 chr8:116521829-116523552 2 400 1321 intronic -3.13 1 0,1,0 0 0,0,0 0 76.4958364875095 20.215 9.1625 83.2581377744133 50.315 8.885 63.9174867524603 70.935 0 0 cat,chimp,cow,horse,human,macaque,marmoset,mouse,orangutan,panda,pig,rat, antisense antisense A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0.0048,SKNSHRA@0, 0 0 0 0 ENSG00000249917.2 ENST00000505156.2 chr8:116962736-117337297 14 2678 371857 intergenic 6.41 0 0,0,0 0 0,0,0 58.2460791635549 25.226522561092 0 65.773711725168 31.6218062319655 18.959 68.4611650485437 36.3063516351715 19.123 1 1 chimp,human,macaque,marmoset,orangutan, lincRNA lincRNA A549@0.0037585,AG04450@0,BJ@0,GM12878@0.0061765,H1HESC@0,HELAS3@0,HEPG2@0.000808,HMEC@0.004563,HSMM@0,HUVEC@0,K562@0.0009945,MCF7@0.014933,NHEK@0.00926933,NHLF@0,SKNSHRA@0.0066635, 0 0 0 0 ENSG00000253672.1 ENST00000523110.1 chr8:117414781-117415995 2 553 659 intergenic 0 0 0,0,1 0 0,0,0 0 0 33.579 0 0 0 0 0 0 0 0 chimp,dog,human,macaque,marmoset,panda,pig, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0.009648,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0.019713, 0 0 0 0 ENSG00000253622.1 ENST00000518439.1 chr8:118140694-118142538 2 495 1347 intronic -1.18 0 0,0,1 0 0,0,0 37.9010101010101 0 0 65.4444444444444 0 16.631 67.5434343434343 0.872308834446919 11.837 0 0 chimp,cow,dog,elephant,guinea_pig,horse,human,macaque,marmoset,mouse,orangutan,panda,pig,rabbit,rat, sense_intronic sense_intronic A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000254278.1 ENST00000518362.1 chr8:120075181-120081021 2 1406 4432 intronic -0.97 1 0,0,0 0 0,0,0 114.352773826458 8.45487364620939 0 177.584637268848 16.4111010830325 0 149.27027027027 19.9149368231047 0 0 0 cat,chimp,elephant,horse,human,macaque,marmoset,orangutan,panda,rabbit, antisense antisense A549@0,AG04450@0.0142935,BJ@0.003497,GM12878@0,H1HESC@0,HELAS3@0.016158,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0.0219265,SKNSHRA@0.0032285, 0 0 0 0 ENSG00000147676.9 ENST00000522112.2 chr8:120177273-120255768 5 568 77919 intergenic -0.56 0 0,0,1 0 0,1,1 155.970070422535 3.95478638072871 0 264.579225352113 5.21677639600098 0 277.602112676056 5.72314839769504 0 0 0 cat,chimp,cow,dog,elephant,guinea_pig,horse,human,macaque,marmoset,mouse,opossum,orangutan,panda,pig,rabbit,rat, lincRNA lincRNA A549@0.168197,AG04450@0.014844,BJ@0.006872,GM12878@0.0672405,H1HESC@31.3346,HELAS3@89.6786,HEPG2@53.7655,HMEC@14.1599,HSMM@0.012877,HUVEC@0.652522,K562@0,MCF7@54.8048,NHEK@36.1026,NHLF@0.0080475,SKNSHRA@0.586651, 0 0 0 0 ENSG00000147676.9 ENST00000534619.1 chr8:120220188-120255762 4 574 34994 intergenic -3.69 0 0,1,1 0 0,1,1 154.339721254355 5.59135851860319 38.192 261.813588850174 6.01288792364405 27.986 274.700348432056 6.6968908955821 27.724 0 0 cat,chimp,cow,dog,elephant,guinea_pig,horse,human,macaque,marmoset,mouse,opossum,orangutan,panda,pig,platypus,rabbit,rat, lincRNA lincRNA A549@0.168197,AG04450@0.014844,BJ@0.006872,GM12878@0.0672405,H1HESC@31.3346,HELAS3@89.6786,HEPG2@53.7655,HMEC@14.1599,HSMM@0.012877,HUVEC@0.652522,K562@0,MCF7@54.8048,NHEK@36.1026,NHLF@0.0080475,SKNSHRA@0.586651, 0 0 0 0 ENSG00000147676.9 ENST00000276681.6 chr8:120220610-120257909 5 2809 34482 intergenic 12.01 1 1,1,1 1 0,1,1 65.3908864364543 4.41876921292268 0 141.88323246707 4.24189432167508 12.563 143.99288002848 4.75036250797517 14.562 0 0 cat,chimp,cow,elephant,horse,human,mouse,orangutan,panda,pig,rabbit, lincRNA lincRNA A549@0.168197,AG04450@0.014844,BJ@0.006872,GM12878@0.0672405,H1HESC@31.3346,HELAS3@89.6786,HEPG2@53.7655,HMEC@14.1599,HSMM@0.012877,HUVEC@0.652522,K562@0,MCF7@54.8048,NHEK@36.1026,NHLF@0.0080475,SKNSHRA@0.586651, 0 0 0 0 ENSG00000147676.9 ENST00000521748.1 chr8:120220610-120257913 4 2815 34482 intergenic 0.50 1 1,1,1 1 0,1,1 65.9960923623446 4.41876921292268 0 142.579040852575 4.24189432167508 12.563 144.740319715808 4.75036250797517 14.562 0 0 cat,chimp,cow,elephant,horse,human,mouse,orangutan,panda,pig,rabbit, lincRNA lincRNA A549@0.168197,AG04450@0.014844,BJ@0.006872,GM12878@0.0672405,H1HESC@31.3346,HELAS3@89.6786,HEPG2@53.7655,HMEC@14.1599,HSMM@0.012877,HUVEC@0.652522,K562@0,MCF7@54.8048,NHEK@36.1026,NHLF@0.0080475,SKNSHRA@0.586651, 0 0 0 0 ENSG00000147676.9 ENST00000531508.1 chr8:120221108-120255888 4 888 33886 intergenic -3.69 0 0,0,1 0 0,1,1 111.068693693694 4.15186212595172 44.936 196.391891891892 3.21165082925102 80.71 205.300675675676 3.67789057427846 86.559 0 0 cat,chimp,cow,elephant,horse,human,macaque,marmoset,mouse,orangutan,panda,pig,rabbit,rat, lincRNA lincRNA A549@0.168197,AG04450@0.014844,BJ@0.006872,GM12878@0.0672405,H1HESC@31.3346,HELAS3@89.6786,HEPG2@53.7655,HMEC@14.1599,HSMM@0.012877,HUVEC@0.652522,K562@0,MCF7@54.8048,NHEK@36.1026,NHLF@0.0080475,SKNSHRA@0.586651, 0 0 0 0 ENSG00000253972.1 ENST00000523307.1 chr8:120227351-120259076 2 554 31169 intergenic 1.94 0 0,0,0 0 0,0,0 0 6.5953351086015 0 3.01985559566787 13.3267669800122 0 6.79602888086643 13.5178221951298 0 0 0 cat,chimp,cow,dog,horse,human,macaque,marmoset,orangutan,panda,pig,rat, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0.0420905,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0.00414667,NHLF@0,SKNSHRA@0.014513, 0 0 0 0 ENSG00000253972.1 ENST00000524129.1 chr8:120227412-120259083 2 568 31101 intergenic 1.96 0 0,0,0 0 0,0,0 0 6.60975531333398 0 2.94542253521127 13.3559049548246 0 6.62852112676056 13.5473778978168 0 0 0 cat,chimp,dog,horse,human,macaque,marmoset,orangutan,panda,pig, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0.0420905,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0.00414667,NHLF@0,SKNSHRA@0.014513, 0 0 0 0 ENSG00000253972.1 ENST00000522187.1 chr8:120227778-120259088 6 541 30759 intergenic 1.96 0 0,0,0 0 0,0,0 0 6.68324717968725 0 0 13.5044052147339 0 0 13.6980070873565 0 0 0 chimp,dog,horse,human,macaque,orangutan, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0.0420905,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0.00414667,NHLF@0,SKNSHRA@0.014513, 0 0 0 0 ENSG00000253972.1 ENST00000522828.1 chr8:120233334-120259055 5 598 25115 intergenic -4.73 0 0,0,0 0 0,0,0 0 7.72088393390404 0 0 15.7835158271949 0 0 15.7923949830778 0 1 1 chimp,human,macaque,marmoset,orangutan, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0.0420905,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0.00414667,NHLF@0,SKNSHRA@0.014513, 0 0 0 0 ENSG00000253972.1 ENST00000521048.1 chr8:120236044-120259083 5 570 22461 intergenic 1.96 0 0,0,1 0 0,0,0 27.4035087719298 6.51645073683273 0 7.58947368421053 14.1807132362762 0 2.53508771929825 13.677663505632 0 0 0 cat,chimp,dog,elephant,guinea_pig,horse,human,macaque,marmoset,orangutan,pig,rabbit, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0.0420905,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0.00414667,NHLF@0,SKNSHRA@0.014513, 0 0 0 0 ENSG00000253398.1 ENST00000519786.1 chr8:120432150-120474590 4 321 42113 intronic 0 0 0,0,0 0 0,0,0 0 11.8589746634056 0 58.5919003115265 60.2243012846389 0 60.2554517133956 61.3392539120936 0 0 0 chimp,elephant,horse,human,macaque,marmoset,orangutan, antisense antisense A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000253531.1 ENST00000523563.1 chr8:120884718-120886723 3 416 1585 intronic -4.73 0 0,1,0 0 0,0,0 0 18.8504731861199 10.81 0 66.3482649842271 23.005 0 65.1671924290221 23.368 0 0 cat,chimp,elephant,human,macaque,marmoset,orangutan,panda,pig, lincRNA processed_transcript A549@0.008049,AG04450@0,BJ@0,GM12878@0,H1HESC@0.0333215,HELAS3@0.0880865,HEPG2@0.00651,HMEC@0,HSMM@0,HUVEC@0,K562@0.00639,MCF7@0.017032,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000254343.1 ENST00000520544.1 chr8:121064419-121068423 2 488 3514 intergenic 0 0 0,0,1 0 0,0,0 65.608606557377 0 0 26.452868852459 7.82697780307342 1.434 32.030737704918 8.10586226522482 1.458 0 0 chimp,human,macaque,marmoset,orangutan,pig,rabbit, lincRNA lincRNA A549@0.252908,AG04450@0.041535,BJ@0.0223755,GM12878@0.0243995,H1HESC@0.340696,HELAS3@0.719855,HEPG2@0.314946,HMEC@0.008356,HSMM@0.100751,HUVEC@0.0488695,K562@0,MCF7@0.660161,NHEK@0.0493807,NHLF@0.0821515,SKNSHRA@0.0829745, 0 0 0 0 ENSG00000248318.1 ENST00000509350.1 chr8:121773493-121789072 5 1968 13603 intronic 3.24 0 0,0,0 0 0,0,0 16.0223577235772 21.0890979930898 0 6.37195121951219 11.5328971550393 4.59 7.81758130081301 12.2497978387121 4.726 0 0 chimp,human,marmoset,orangutan,pig, antisense antisense A549@0,AG04450@0,BJ@0,GM12878@0.0387855,H1HESC@0,HELAS3@0.0232715,HEPG2@0.059465,HMEC@0,HSMM@0.014825,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0.002304, 0 0 0 0 ENSG00000253619.1 ENST00000517739.1 chr8:121925305-122131994 4 772 205911 intergenic 0 0 0,0,0 0 0,0,0 0 3.47193690477925 0 4.95336787564767 7.08912102801696 0 4.11787564766839 9.44264269514499 0 0 0 chimp,cow,dog,elephant,guinea_pig,horse,human,macaque,marmoset,mouse,opossum,orangutan,panda,pig,rabbit,rat, lincRNA lincRNA A549@0.002797,AG04450@0,BJ@0,GM12878@0.0647335,H1HESC@0,HELAS3@0.037653,HEPG2@0.0084115,HMEC@0,HSMM@0.005303,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0.0087715, 0 0 0 0 ENSG00000248690.2 ENST00000518865.1 chr8:122651533-122655691 4 573 3579 exonic -7.62 0 0,0,0 0 0,0,0 149.649214659686 96.7105336686225 30.268 192.520069808028 111.096954456552 16.458 198.713787085515 98.6127409891031 17.329 0 0 chimp,dog,horse,human,macaque,marmoset,orangutan,panda,pig,rat, lincRNA antisense A549@0.66155,AG04450@0.200386,BJ@0.160894,GM12878@0,H1HESC@0.0537005,HELAS3@0.0193785,HEPG2@0.007077,HMEC@0.044557,HSMM@0.177113,HUVEC@0.012642,K562@0,MCF7@0.034959,NHEK@0.0136513,NHLF@0.440792,SKNSHRA@0.227141, 0 0 0 0 ENSG00000248690.2 ENST00000514180.1 chr8:122651586-122656933 4 1652 3689 exonic -1.75 0 0,0,1 0 0,0,0 59.4001210653753 88.1141230685823 39.284 112.316585956416 84.2651124966116 28.414 109.742736077482 74.1507183518569 29.733 0 0 chimp,horse,human,macaque,marmoset,orangutan,panda,pig, lincRNA antisense A549@0.66155,AG04450@0.200386,BJ@0.160894,GM12878@0,H1HESC@0.0537005,HELAS3@0.0193785,HEPG2@0.007077,HMEC@0.044557,HSMM@0.177113,HUVEC@0.012642,K562@0,MCF7@0.034959,NHEK@0.0136513,NHLF@0.440792,SKNSHRA@0.227141, 0 0 0 0 ENSG00000248690.2 ENST00000522197.1 chr8:122652142-122654957 3 572 2239 exonic -2.45 0 1,1,1 0 0,0,0 66.9475524475525 149.414917373828 60.358 126.704545454545 152.042876284055 99.069 118.5 134.658329611434 99.949 0 0 cat,chimp,cow,dog,elephant,horse,human,macaque,marmoset,orangutan,panda,pig,rat, lincRNA antisense A549@0.66155,AG04450@0.200386,BJ@0.160894,GM12878@0,H1HESC@0.0537005,HELAS3@0.0193785,HEPG2@0.007077,HMEC@0.044557,HSMM@0.177113,HUVEC@0.012642,K562@0,MCF7@0.034959,NHEK@0.0136513,NHLF@0.440792,SKNSHRA@0.227141, 0 0 0 0 ENSG00000248690.2 ENST00000520043.1 chr8:122653676-122656933 3 592 2661 exonic -1.75 0 0,1,1 0 0,0,0 14.1993243243243 51.8921458098459 235.812 20.152027027027 59.8316422397595 218.703 20.4324324324324 48.5080796692973 216.465 0 0 cat,chimp,dog,elephant,horse,human,macaque,marmoset,orangutan,pig, lincRNA antisense A549@0.66155,AG04450@0.200386,BJ@0.160894,GM12878@0,H1HESC@0.0537005,HELAS3@0.0193785,HEPG2@0.007077,HMEC@0.044557,HSMM@0.177113,HUVEC@0.012642,K562@0,MCF7@0.034959,NHEK@0.0136513,NHLF@0.440792,SKNSHRA@0.227141, 0 0 0 0 ENSG00000254209.1 ENST00000518922.1 chr8:122684013-122696802 3 411 12374 intergenic -0.80 0 0,0,0 0 0,0,0 0 1.04218522708906 0 1.24087591240876 3.32851139486019 8.928 1.45985401459854 4.17835784709876 9.792 0 0 cat,chimp,elephant,horse,human,macaque,marmoset,orangutan,panda,rabbit, lincRNA lincRNA A549@0,AG04450@0.005414,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000248478.2 ENST00000458107.3 chr8:122691366-122719871 3 336 28165 intergenic -7.75 0 0,1,0 0 0,0,0 0 2.66600390555654 0 0 3.58682762293627 0 0 3.68396946564885 0 0 0 chimp,horse,human,macaque,marmoset,orangutan, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0.025755,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000254303.1 ENST00000523792.1 chr8:122966879-123139423 3 787 171753 intergenic 1.71 0 0,0,0 0 0,0,0 0 2.71852020052051 0 0 6.71603989449966 1.736 0 7.94481610219327 1.757 0 1 chimp,human,macaque,orangutan, lincRNA lincRNA A549@0,AG04450@0.015528,BJ@0.101579,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0.025915,HSMM@0.215236,HUVEC@0,K562@0,MCF7@0,NHEK@0.113006,NHLF@0.061198,SKNSHRA@0.011488, 128 2 0 0 ENSG00000255364.1 ENST00000533992.1 chr8:123426571-123440790 3 550 13665 intergenic 0 0 0,0,0 0 0,0,0 0 0.740578119282839 0 0 0.707793633369923 0 0 1.56926454445664 0 0 0 chimp,dog,human,macaque,marmoset,orangutan,panda, lincRNA lincRNA A549@0.0510275,AG04450@0.0042585,BJ@0.0785435,GM12878@0.187083,H1HESC@0,HELAS3@0.007548,HEPG2@0,HMEC@0.192514,HSMM@0.004122,HUVEC@0,K562@0,MCF7@0.0259435,NHEK@0.18987,NHLF@0.628679,SKNSHRA@0, 0 0 0 0 ENSG00000255325.1 ENST00000530350.1 chr8:123497754-123502054 3 548 3748 intergenic -5.47 0 0,1,1 0 0,0,0 0 0 18.224 4.18795620437956 0.63153681963714 24.429 0 0.530416221985059 24.178 0 0 chimp,horse,human,macaque,marmoset,orangutan, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0.053288,H1HESC@0,HELAS3@0.0075755,HEPG2@0.0570235,HMEC@0.066881,HSMM@0,HUVEC@0,K562@0,MCF7@0.0147605,NHEK@0.0539557,NHLF@0,SKNSHRA@0.004125, 0 0 0 0 ENSG00000253372.1 ENST00000521482.1 chr8:123819985-123828756 5 541 8222 intronic -5.92 0 0,1,0 0 0,0,0 0 15.091218681586 40.04 0 18.2945755290684 47.168 0 17.877645341766 47.344 0 0 cat,chimp,horse,human,macaque,marmoset,orangutan,rabbit, sense_intronic sense_intronic A549@0.092195,AG04450@0.005854,BJ@0.0286925,GM12878@0.031817,H1HESC@0.00768,HELAS3@0.0241045,HEPG2@0.0128595,HMEC@0,HSMM@0.027719,HUVEC@0,K562@0,MCF7@0.010958,NHEK@0.0209477,NHLF@0,SKNSHRA@0.011993, 0 0 0 0 ENSG00000253372.1 ENST00000524348.1 chr8:123821009-123828013 5 753 6243 intronic -0.57 0 0,0,1 0 0,0,0 0 19.8750600672753 0 0 24.0938651289444 0 0 23.3501521704309 1.215 1 1 chimp,human,macaque,marmoset,orangutan, sense_intronic sense_intronic A549@0.092195,AG04450@0.005854,BJ@0.0286925,GM12878@0.031817,H1HESC@0.00768,HELAS3@0.0241045,HEPG2@0.0128595,HMEC@0,HSMM@0.027719,HUVEC@0,K562@0,MCF7@0.010958,NHEK@0.0209477,NHLF@0,SKNSHRA@0.011993, 0 0 0 0 ENSG00000253607.1 ENST00000521258.1 chr8:124014800-124042991 2 623 27566 exonic 1.99 0 0,0,0 0 0,0,0 82.4205457463884 19.6916854095625 78.848 137.370786516854 27.5863745193354 78.589 128.695024077047 30.2558223899006 62.646 0 0 cat,chimp,cow,dog,elephant,guinea_pig,horse,human,macaque,marmoset,opossum,orangutan,panda,pig,rabbit, antisense antisense A549@0.003473,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0.013357,HEPG2@0,HMEC@0.006551,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0.0061745,SKNSHRA@0.0072605, 0 0 0 0 ENSG00000204949.4 ENST00000517519.1 chr8:124213412-124214983 3 1155 412 intronic 6.26 0 0,1,1 0 0,1,0 6.87619047619048 0 0 0 0 0 0 0 0 1 1 chimp,human,macaque,marmoset,orangutan, antisense antisense A549@0.014562,AG04450@0,BJ@0,GM12878@0.0064845,H1HESC@0.001837,HELAS3@0.0083875,HEPG2@0,HMEC@0,HSMM@0.045313,HUVEC@0,K562@0.007077,MCF7@0.002985,NHEK@0.003839,NHLF@0,SKNSHRA@0.0016845, 0 0 0 0 ENSG00000204949.4 ENST00000520576.1 chr8:124213412-124214983 2 1345 224 intronic 6.26 0 0,1,1 0 0,1,0 5.90483271375465 0 0 0 0 0 0 0 0 1 1 chimp,human,macaque,marmoset,orangutan, antisense antisense A549@0.014562,AG04450@0,BJ@0,GM12878@0.0064845,H1HESC@0.001837,HELAS3@0.0083875,HEPG2@0,HMEC@0,HSMM@0.045313,HUVEC@0,K562@0.007077,MCF7@0.002985,NHEK@0.003839,NHLF@0,SKNSHRA@0.0016845, 0 0 0 0 ENSG00000204949.4 ENST00000523330.1 chr8:124213412-124214983 2 817 752 intronic 6.26 0 0,1,1 0 0,1,0 9.72093023255814 0 0 0 0 0 0 0 0 1 1 chimp,human,macaque,marmoset,orangutan, antisense antisense A549@0.014562,AG04450@0,BJ@0,GM12878@0.0064845,H1HESC@0.001837,HELAS3@0.0083875,HEPG2@0,HMEC@0,HSMM@0.045313,HUVEC@0,K562@0.007077,MCF7@0.002985,NHEK@0.003839,NHLF@0,SKNSHRA@0.0016845, 0 0 0 0 ENSG00000254113.1 ENST00000518970.1 chr8:124575310-124581002 2 535 5155 intergenic 7.02 0 0,1,1 0 0,0,0 0 6.67352085354025 0 1.62056074766355 19.9850630455868 6.835 1.62056074766355 23.4576139670223 8.21 0 0 cat,chimp,dog,horse,human,macaque,marmoset,orangutan,panda, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0.01525,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000253286.1 ENST00000518633.1 chr8:124626465-124651884 5 538 24873 intergenic 0 0 0,0,0 0 0,0,0 38.1226765799257 10.3878502794194 0 52.7026022304833 14.146423833072 0 53.7434944237918 15.9605998472239 0 0 0 chimp,dog,horse,human,macaque,marmoset,orangutan,pig, antisense antisense A549@0,AG04450@0,BJ@0,GM12878@0.0053855,H1HESC@0,HELAS3@0.009775,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000253286.1 ENST00000524355.1 chr8:124626465-124670810 4 562 43777 encompassing 3.46 0 0,0,0 0 0,0,0 64.2526690391459 19.0265207757498 0 72.1459074733096 26.7045252073006 0 77.2330960854093 30.3282088768075 0 0 0 cat,chimp,dog,elephant,guinea_pig,horse,human,macaque,marmoset,orangutan,panda,pig,rabbit,rat, antisense antisense A549@0,AG04450@0,BJ@0,GM12878@0.0053855,H1HESC@0,HELAS3@0.009775,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000254000.1 ENST00000522087.1 chr8:124936999-124938173 2 329 843 intronic -1.14 0 0,0,0 0 0,0,0 0 0 0 0 0 0 0 0 0 1 1 chimp,human,macaque,marmoset,orangutan, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000181171.5 ENST00000518567.1 chr8:124996378-125053023 6 2309 54326 intronic 1.80 0 0,0,0 0 0,1,0 0 7.18221477745463 0 3.52836725855349 10.4371755697088 0 3.61108705067129 11.1026948422486 1.458 1 1 chimp,human,macaque,marmoset,orangutan, antisense antisense A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0.001003,MCF7@0.0008685,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000254249.1 ENST00000522005.1 chr8:125048251-125052709 2 325 4131 intronic 0 1 0,0,0 0 0,0,0 0 9.27015250544662 0 0 16.4548535463568 0 0 16.1387073347858 1.458 0 0 chimp,dog,elephant,guinea_pig,horse,human,macaque,marmoset,orangutan,panda,pig,rabbit,rat, antisense antisense A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000253868.1 ENST00000520031.1 chr8:125058314-125183763 5 1741 123700 exonic 9.86 0 0,1,1 0 0,1,0 14.260769672602 6.80864187550525 0 61.799540493969 11.4309054163298 0 66.3296955772544 23.5239531123686 0 0 0 chimp,cow,dog,elephant,horse,human,macaque,marmoset,orangutan,rabbit, antisense antisense A549@0.0141385,AG04450@0,BJ@0,GM12878@0.002685,H1HESC@0.0045015,HELAS3@0.0028585,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0.0013925,K562@0.0059355,MCF7@0.0808205,NHEK@0,NHLF@0.0011175,SKNSHRA@0.0083835, 0 0 0 0 ENSG00000214803.3 ENST00000523703.1 chr8:125204912-125259639 3 1192 53531 intergenic 1.07 0 0,1,0 0 0,1,0 0 0.18045618426706 0 0 2.46752349106125 6.289 0 2.81888998897835 7.557 1 1 chimp,human,macaque,marmoset,orangutan, lincRNA lincRNA A549@0.058509,AG04450@0.0075025,BJ@0,GM12878@0,H1HESC@0,HELAS3@0.016447,HEPG2@0.018261,HMEC@0,HSMM@0,HUVEC@0,K562@0.062938,MCF7@0.169614,NHEK@0,NHLF@0.0146045,SKNSHRA@0.017766, 0 0 0 0 ENSG00000253227.1 ENST00000517482.1 chr8:125283924-125289825 3 550 5347 intergenic 0.76 0 0,1,0 0 0,0,0 0 5.79857864222929 0 0 4.13353282214326 0 0 5.74303347671592 0 0 0 chimp,elephant,horse,human,macaque,orangutan, lincRNA lincRNA A549@2.49718,AG04450@0.509178,BJ@0.013356,GM12878@0,H1HESC@0,HELAS3@0.684532,HEPG2@0.23278,HMEC@0,HSMM@0,HUVEC@0.0452645,K562@0.009683,MCF7@0.69764,NHEK@0.002382,NHLF@0.0246985,SKNSHRA@0, 0 0 0 0 ENSG00000245149.3 ENST00000499418.2 chr8:125474726-125486805 2 5652 6425 intergenic 2.52 0 0,1,0 1 0,0,0 0 0 88.448 0.857218683651805 3.30038910505837 284.601 0.962491153573956 4.66178988326848 269.969 0 1 chimp,human,macaque, lincRNA processed_transcript A549@1.07249,AG04450@0.528292,BJ@0.401409,GM12878@3.56885,H1HESC@0.741599,HELAS3@4.18405,HEPG2@1.33143,HMEC@0.247289,HSMM@0.155228,HUVEC@0.682045,K562@7.92124,MCF7@2.59242,NHEK@0.353284,NHLF@0.290548,SKNSHRA@0.782928, 0 0 0 0 ENSG00000245149.3 ENST00000519861.1 chr8:125485049-125486595 3 356 1186 intergenic 1.69 0 0,1,1 0 0,0,0 0 0 78.328 0 0 284.601 6.82584269662921 3.8929173693086 269.969 0 0 chimp,elephant,human,macaque,marmoset,orangutan, lincRNA processed_transcript A549@1.07249,AG04450@0.528292,BJ@0.401409,GM12878@3.56885,H1HESC@0.741599,HELAS3@4.18405,HEPG2@1.33143,HMEC@0.247289,HSMM@0.155228,HUVEC@0.682045,K562@7.92124,MCF7@2.59242,NHEK@0.353284,NHLF@0.290548,SKNSHRA@0.782928, 0 0 0 0 ENSG00000245149.3 ENST00000530778.1 chr8:125485051-125486817 1 1766 0 intergenic 2.52 0 1,1,1 1 0,0,0 0 0 88.448 0 0 284.601 3.99037372593431 0 269.969 0 0 cat,chimp,elephant,horse,human,macaque,marmoset,orangutan,pig, lincRNA retained_intron A549@1.07249,AG04450@0.528292,BJ@0.401409,GM12878@3.56885,H1HESC@0.741599,HELAS3@4.18405,HEPG2@1.33143,HMEC@0.247289,HSMM@0.155228,HUVEC@0.682045,K562@7.92124,MCF7@2.59242,NHEK@0.353284,NHLF@0.290548,SKNSHRA@0.782928, 0 0 0 0 ENSG00000253106.1 ENST00000518639.1 chr8:125500751-125503884 2 2353 778 exonic -2.52 0 0,1,0 0 0,1,1 34.4228644283893 0 252.049 31.516787080323 0 286.105 31.8878028049299 0 284.797 0 1 chimp,human, antisense antisense A549@0.371008,AG04450@0.341806,BJ@0.445572,GM12878@0.361233,H1HESC@0.385346,HELAS3@0.896066,HEPG2@0.813332,HMEC@0.104322,HSMM@0.426419,HUVEC@0.544318,K562@0.46656,MCF7@1.41493,NHEK@0.297878,NHLF@0.476595,SKNSHRA@0.471213, 0 0 0 0 ENSG00000255491.1 ENST00000533516.1 chr8:125823860-125827924 3 779 3281 intergenic 6.33 0 0,1,0 0 0,0,0 57.9075738125802 0 42.961 208.206675224647 1.34257848217007 38.302 177.911424903723 14.5141725083816 26.739 1 1 chimp,human,macaque,marmoset,orangutan, lincRNA lincRNA A549@0.004313,AG04450@0.0764125,BJ@0.0045755,GM12878@0,H1HESC@0.0721265,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0.196901,HUVEC@0,K562@0.969758,MCF7@0.052306,NHEK@0.0671393,NHLF@0.002495,SKNSHRA@0, 0 0 0 0 ENSG00000255080.1 ENST00000533496.1 chr8:125847126-125869758 3 550 22078 intergenic 5.21 0 0,1,0 0 0,0,0 61.1509090909091 5.21378748075007 0 6.87272727272727 12.4083250294411 0 7.07636363636364 12.7992571790923 0 0 0 chimp,cow,elephant,human,macaque,marmoset,mouse,orangutan, lincRNA lincRNA A549@0,AG04450@0.0085175,BJ@0,GM12878@0,H1HESC@0.0044745,HELAS3@0.007548,HEPG2@0.007869,HMEC@0.72563,HSMM@0.004122,HUVEC@0.0087935,K562@0.123762,MCF7@0.420597,NHEK@0.244918,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000249816.2 ENST00000525292.1 chr8:125860979-125862459 3 617 859 intergenic 3.20 0 0,1,0 0 0,0,0 0 15.2619324796275 17.408 0 18.2281722933644 35.467 0 18.1699650756694 31.505 1 1 chimp,human,macaque,marmoset,orangutan, processed_transcript processed_transcript A549@0.055541,AG04450@0.0318885,BJ@0,GM12878@0,H1HESC@0,HELAS3@0.0012045,HEPG2@0.013735,HMEC@0.067899,HSMM@0.034421,HUVEC@0.0276835,K562@0.161006,MCF7@0.0076085,NHEK@0.873556,NHLF@0.005816,SKNSHRA@0.00103, 0 0 0 0 ENSG00000249816.2 ENST00000528090.1 chr8:125861008-125956854 6 566 95270 intergenic 3.34 0 0,1,0 0 0,0,0 0 2.27816731394983 17.408 0 3.49216962317624 30.217 0 10.0109793219272 26.225 0 0 chimp,horse,human,macaque,marmoset,orangutan, processed_transcript processed_transcript A549@0.055541,AG04450@0.0318885,BJ@0,GM12878@0,H1HESC@0,HELAS3@0.0012045,HEPG2@0.013735,HMEC@0.067899,HSMM@0.034421,HUVEC@0.0276835,K562@0.161006,MCF7@0.0076085,NHEK@0.873556,NHLF@0.005816,SKNSHRA@0.00103, 0 0 0 0 ENSG00000255313.1 ENST00000531948.1 chr8:125948766-125956007 3 484 6753 intergenic 2.63 0 0,1,1 0 0,0,0 0 9.93143787946098 0 1.6301652892562 10.389456537835 0 1.72314049586777 10.6836961350511 0 1 1 chimp,human,macaque,marmoset,orangutan, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0.0100865,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000249816.2 ENST00000529135.1 chr8:125952591-125966570 3 492 13483 intergenic -3.24 0 0,1,0 0 0,0,0 0 6.31217088185122 0 0 5.65719795297782 0 0 5.8273381294964 0 0 0 cat,chimp,dog,horse,human,macaque,marmoset,orangutan,panda, processed_transcript processed_transcript A549@0.055541,AG04450@0.0318885,BJ@0,GM12878@0,H1HESC@0,HELAS3@0.0012045,HEPG2@0.013735,HMEC@0.067899,HSMM@0.034421,HUVEC@0.0276835,K562@0.161006,MCF7@0.0076085,NHEK@0.873556,NHLF@0.005816,SKNSHRA@0.00103, 0 0 0 0 ENSG00000249816.2 ENST00000510897.2 chr8:125954297-125963339 4 3530 5506 intergenic -2.62 1 0,0,1 0 0,0,0 4.30028328611898 3.60788231020705 49.842 3.59915014164306 4.81620050853614 37.053 4.42351274787535 4.96077006901562 35.641 0 1 chimp,human,macaque,orangutan, processed_transcript processed_transcript A549@0.055541,AG04450@0.0318885,BJ@0,GM12878@0,H1HESC@0,HELAS3@0.0012045,HEPG2@0.013735,HMEC@0.067899,HSMM@0.034421,HUVEC@0.0276835,K562@0.161006,MCF7@0.0076085,NHEK@0.873556,NHLF@0.005816,SKNSHRA@0.00103, 0 0 0 0 ENSG00000249816.2 ENST00000533286.1 chr8:125954341-125957988 2 733 2912 intergenic -2.62 0 0,0,0 0 0,0,0 0 5.91517857142857 49.842 0 11.3355082417582 37.053 0 12.5010302197802 35.641 0 0 chimp,horse,human,macaque,marmoset,orangutan, processed_transcript processed_transcript A549@0.055541,AG04450@0.0318885,BJ@0,GM12878@0,H1HESC@0,HELAS3@0.0012045,HEPG2@0.013735,HMEC@0.067899,HSMM@0.034421,HUVEC@0.0276835,K562@0.161006,MCF7@0.0076085,NHEK@0.873556,NHLF@0.005816,SKNSHRA@0.00103, 0 0 0 0 ENSG00000249816.2 ENST00000504665.1 chr8:125956421-125963337 4 2199 4711 intergenic -3.48 1 0,0,1 0 0,0,0 6.9031377899045 0.560390575249416 0 1.30422919508868 0.710252600297177 9.837 1.36971350613915 0.74591381872214 12.603 0 1 chimp,human,orangutan, processed_transcript processed_transcript A549@0.055541,AG04450@0.0318885,BJ@0,GM12878@0,H1HESC@0,HELAS3@0.0012045,HEPG2@0.013735,HMEC@0.067899,HSMM@0.034421,HUVEC@0.0276835,K562@0.161006,MCF7@0.0076085,NHEK@0.873556,NHLF@0.005816,SKNSHRA@0.00103, 0 0 0 0 ENSG00000249816.2 ENST00000532713.1 chr8:125957254-125963338 4 531 5547 intergenic 0 1 0,0,1 0 0,0,0 28.5875706214689 0.475932936722553 0 5.40112994350283 0.603208941770326 0 5.67231638418079 0.633495583198125 0 0 0 chimp,human,macaque,marmoset,orangutan,panda, processed_transcript processed_transcript A549@0.055541,AG04450@0.0318885,BJ@0,GM12878@0,H1HESC@0,HELAS3@0.0012045,HEPG2@0.013735,HMEC@0.067899,HSMM@0.034421,HUVEC@0.0276835,K562@0.161006,MCF7@0.0076085,NHEK@0.873556,NHLF@0.005816,SKNSHRA@0.00103, 0 0 0 0 ENSG00000249816.2 ENST00000529478.1 chr8:125957877-125963419 2 472 5068 intergenic 0 1 0,0,1 0 0,0,0 32.1610169491525 0.520915548539858 0 6.07627118644068 0.660220994475138 0 6.38135593220339 0.693370165745856 0 0 0 chimp,elephant,horse,human,macaque,marmoset,orangutan,panda,pig, processed_transcript processed_transcript A549@0.055541,AG04450@0.0318885,BJ@0,GM12878@0,H1HESC@0,HELAS3@0.0012045,HEPG2@0.013735,HMEC@0.067899,HSMM@0.034421,HUVEC@0.0276835,K562@0.161006,MCF7@0.0076085,NHEK@0.873556,NHLF@0.005816,SKNSHRA@0.00103, 0 0 0 0 ENSG00000249816.2 ENST00000530549.1 chr8:125958238-125963336 2 441 4655 intergenic 0 1 0,0,1 0 0,0,0 34.421768707483 0.567132116004296 0 6.50340136054422 0.718796992481203 0 6.82993197278912 0.754887218045113 0 0 0 chimp,human,macaque,marmoset,orangutan,panda, processed_transcript processed_transcript A549@0.055541,AG04450@0.0318885,BJ@0,GM12878@0,H1HESC@0,HELAS3@0.0012045,HEPG2@0.013735,HMEC@0.067899,HSMM@0.034421,HUVEC@0.0276835,K562@0.161006,MCF7@0.0076085,NHEK@0.873556,NHLF@0.005816,SKNSHRA@0.00103, 0 0 0 0 ENSG00000253513.1 ENST00000523030.1 chr8:126009227-126010440 2 410 801 intergenic -4.53 0 0,1,1 0 0,0,0 0 0 40.727 0 0 44.442 0 0 41.54 0 0 chimp,horse,human,macaque,orangutan,pig, antisense antisense A549@0,AG04450@0,BJ@0.023564,GM12878@0.348042,H1HESC@0.168536,HELAS3@0.406057,HEPG2@0.178162,HMEC@0.029815,HSMM@0,HUVEC@0.072241,K562@0.269968,MCF7@0.049241,NHEK@0.007926,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000253167.1 ENST00000519140.1 chr8:126052926-126057231 2 585 3718 exonic 3.03 0 0,0,1 0 0,0,0 106.769230769231 18.0516406670253 49.408 137.111111111111 32.7286175363098 48.697 142.735042735043 29.3523399677246 62.821 0 0 cat,chimp,cow,dog,elephant,horse,human,macaque,marmoset,orangutan,panda,pig,rabbit,rat, antisense antisense A549@0.0073955,AG04450@0,BJ@0.0041225,GM12878@0.003434,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0.014021,HUVEC@0,K562@0.0352775,MCF7@0.0156885,NHEK@0.0133107,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000254431.1 ENST00000526947.1 chr8:126360438-126363658 2 720 2498 intronic -2.36 0 0,0,0 0 0,0,0 0 77.3394715772618 0 0 61.6773418734988 0 0 60.8074459567654 0 1 1 chimp,human,macaque,marmoset,orangutan, antisense antisense A549@0.006013,AG04450@0.006524,BJ@0,GM12878@0,H1HESC@0.042529,HELAS3@0.100508,HEPG2@0.0090405,HMEC@0,HSMM@0,HUVEC@0.0871335,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000253111.1 ENST00000522815.1 chr8:126479181-126553615 4 626 73802 intergenic 0.58 0 0,0,0 0 0,0,0 66 12.0348635538332 134.318 38.6341853035144 9.92771198612503 90.532 39.9009584664537 12.3669548250725 85.62 0 0 chimp,cow,elephant,horse,human,macaque,marmoset,orangutan,panda,rat, lincRNA lincRNA A549@0.0079085,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0.0144555,HEPG2@0.0190565,HMEC@0,HSMM@0,HUVEC@0,K562@0.0031285,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000253111.1 ENST00000521991.1 chr8:126535017-126542728 2 783 6926 intergenic 7.03 0 0,0,0 0 0,0,0 0 3.27216286456829 22.359 2.21711366538953 7.28934449898932 4.43 2.24393358876118 7.91813456540572 4.657 0 1 chimp,human,marmoset,orangutan, lincRNA lincRNA A549@0.0079085,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0.0144555,HEPG2@0.0190565,HMEC@0,HSMM@0,HUVEC@0,K562@0.0031285,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000253470.1 ENST00000518339.1 chr8:126761299-126762485 2 634 550 intergenic 2.91 0 0,0,0 0 0,0,0 0 0 0 0 0 0 0 0 0 0 1 chimp,human,macaque,orangutan, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000245164.2 ENST00000522865.1 chr8:126934552-126963394 3 568 28270 intergenic -3.02 0 0,0,1 0 0,0,0 0 0 0 0 1.42727272727273 28.847 0 3.25040679165193 137.888 1 1 chimp,human,macaque,marmoset,orangutan, lincRNA processed_transcript A549@0,AG04450@0,BJ@0,GM12878@0.0438495,H1HESC@0.002184,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0.180958,MCF7@0.000386,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000245164.2 ENST00000518964.1 chr8:126934615-126963493 4 581 28291 intergenic -0.03 0 0,0,1 0 0,0,0 0 0 0 0 1.42621328337634 40.101 0 3.24799406171574 156.228 0 0 chimp,dog,human,macaque,marmoset,orangutan, lincRNA processed_transcript A549@0,AG04450@0,BJ@0,GM12878@0.0438495,H1HESC@0.002184,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0.180958,MCF7@0.000386,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000245164.2 ENST00000517869.1 chr8:126934767-126963394 4 602 28019 intergenic -0.03 0 0,0,1 0 0,0,0 0 0 0 0 1.44005853171062 28.847 0 3.27952460830151 137.888 0 0 chimp,dog,human,macaque,marmoset,orangutan, lincRNA processed_transcript A549@0,AG04450@0,BJ@0,GM12878@0.0438495,H1HESC@0.002184,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0.180958,MCF7@0.000386,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000245164.2 ENST00000500989.2 chr8:126953373-126963433 2 5328 4730 intergenic -0.03 0 0,0,0 0 0,0,0 0 0 0 1.43975225225225 1.31289640591966 40.101 1.46753003003003 2.05708245243129 156.228 0 1 chimp,human,macaque,orangutan, lincRNA processed_transcript A549@0,AG04450@0,BJ@0,GM12878@0.0438495,H1HESC@0.002184,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0.180958,MCF7@0.000386,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000254227.1 ENST00000523525.1 chr8:127011238-127013245 2 202 1803 intergenic -0.46 0 0,1,1 0 0,0,0 0 0 0 0 0 0 0 0 0 1 1 chimp,human,macaque,marmoset,orangutan, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0.0344705,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0.0696065,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000244791.2 ENST00000500180.2 chr8:127337740-127341780 3 1419 2617 intergenic 0.68 1 1,1,1 0 0,0,0 0 7.680550248376 0 6.46793516560958 31.19449751624 0 6.76744186046512 32.4249140236913 0 1 1 chimp,human,macaque,marmoset,orangutan, lincRNA lincRNA A549@0.019981,AG04450@0.0031525,BJ@0,GM12878@0.004113,H1HESC@0.0701685,HELAS3@0,HEPG2@0.0091165,HMEC@0.522446,HSMM@0.0128245,HUVEC@0.011194,K562@0.061021,MCF7@0.0208075,NHEK@0,NHLF@0,SKNSHRA@0.016692, 0 0 0 0 ENSG00000253427.1 ENST00000520171.1 chr8:127486434-127504841 3 412 17991 intergenic -0.58 0 0,0,0 0 0,0,0 0 0 0 0 1.51092212773053 0 0 2.36818409204602 0 0 0 cat,chimp,dog,human,macaque,marmoset,orangutan, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000253220.1 ENST00000521428.1 chr8:127510394-127512548 2 487 1665 intergenic 3.55 1 0,1,0 0 0,0,0 0 0 38.628 3.564681724846 1.19159159159159 40.374 3.60780287474333 1.20600600600601 49.919 0 1 chimp,human, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0.054564,K562@0,MCF7@0.008409,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000253530.1 ENST00000519123.1 chr8:127530943-127534596 3 426 3223 intergenic -12.21 1 0,0,0 0 0,0,0 0 0 0 0 1.55755507291343 1.673 0 1.6009928637915 1.757 1 1 chimp,human,macaque,marmoset,orangutan, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0.0346085,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0.0357077,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000254010.1 ENST00000524320.1 chr8:127569141-127569678 2 482 53 exonic 1.07 0 0,0,0 0 0,0,0 93.9834024896266 271.698113207547 0 462.186721991701 54.5283018867925 192.059 558.429460580913 130.547169811321 272.745 0 0 cat,chimp,cow,dog,elephant,guinea_pig,horse,human,macaque,marmoset,mouse,opossum,orangutan,panda,pig,platypus,rabbit,rat, antisense antisense A549@0.0139365,AG04450@0,BJ@0,GM12878@0,H1HESC@0.14467,HELAS3@0,HEPG2@0,HMEC@0.03384,HSMM@0,HUVEC@0.116707,K562@0,MCF7@0.074513,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000254286.1 ENST00000519880.1 chr8:127570120-127725660 5 569 154963 intronic 1.11 0 0,1,0 1 0,0,0 52 7.28242870878855 60 32.2530755711775 10.3717919761491 270.572 35.6748681898067 11.3493672683157 318.667 0 0 cat,chimp,dog,elephant,horse,human,macaque,marmoset,mouse,orangutan,pig,rabbit,rat, antisense antisense A549@0.023943,AG04450@0,BJ@0,GM12878@0,H1HESC@0.022997,HELAS3@0.0136115,HEPG2@0,HMEC@0.02126,HSMM@0,HUVEC@0,K562@0,MCF7@0.200837,NHEK@0.067194,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000254286.1 ENST00000517773.1 chr8:127570131-127629986 3 495 59356 intronic -7.06 0 0,1,0 1 0,0,0 59.7737373737374 6.0152638317946 60 58.6141414141414 9.78409933283914 264.555 58.2848484848485 10.8749410337624 310.087 0 0 cat,chimp,cow,dog,elephant,horse,human,macaque,marmoset,mouse,orangutan,panda,pig,rabbit,rat, antisense antisense A549@0.023943,AG04450@0,BJ@0,GM12878@0,H1HESC@0.022997,HELAS3@0.0136115,HEPG2@0,HMEC@0.02126,HSMM@0,HUVEC@0,K562@0,MCF7@0.200837,NHEK@0.067194,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000254286.1 ENST00000520512.1 chr8:127570140-127688658 4 368 118144 intronic -0.37 0 0,1,0 1 0,0,0 80.4021739130435 8.82982631365114 60 49.8695652173913 11.7213062026002 259.632 55.1603260869565 12.8192290763814 303.067 0 0 cat,chimp,human,macaque,marmoset,mouse,orangutan,rat, antisense antisense A549@0.023943,AG04450@0,BJ@0,GM12878@0,H1HESC@0.022997,HELAS3@0.0136115,HEPG2@0,HMEC@0.02126,HSMM@0,HUVEC@0,K562@0,MCF7@0.200837,NHEK@0.067194,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000254286.1 ENST00000517915.1 chr8:127601459-127647029 2 315 45253 intergenic 3.24 0 0,0,1 0 0,0,0 81.4857142857143 12.2341723200672 61.872 56.6857142857143 10.6504762115219 73.197 62.6063492063492 11.4931164784655 73.064 0 0 chimp,elephant,horse,human,macaque,marmoset,orangutan, antisense antisense A549@0.023943,AG04450@0,BJ@0,GM12878@0,H1HESC@0.022997,HELAS3@0.0136115,HEPG2@0,HMEC@0.02126,HSMM@0,HUVEC@0,K562@0,MCF7@0.200837,NHEK@0.067194,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000253573.1 ENST00000520224.1 chr8:127779121-127802882 4 288 23467 intergenic 0 0 0,1,0 0 0,0,0 0 1.11603528358972 0 0 4.39749435377338 0 0 7.15327907274044 0 0 0 chimp,cow,dog,elephant,horse,human,macaque,marmoset,orangutan,pig, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000253438.1 ENST00000519319.1 chr8:127859300-128025958 5 729 165921 intergenic 2.73 0 0,0,0 0 0,0,0 0 7.48207882064356 0 0 11.9946179205767 4.897 0 12.3185371351426 8.062 0 0 cat,chimp,horse,human,macaque,marmoset,orangutan,panda, lincRNA lincRNA A549@0.0059145,AG04450@0.008786,BJ@0.003354,GM12878@0.027875,H1HESC@0.475039,HELAS3@0,HEPG2@0,HMEC@0.016736,HSMM@0.0373495,HUVEC@0.094591,K562@0.0222805,MCF7@0.0738605,NHEK@0.354871,NHLF@0.0026585,SKNSHRA@0, 0 0 0 0 ENSG00000253264.1 ENST00000523510.1 chr8:128084939-128094466 4 571 8950 intergenic -1.76 0 0,0,0 0 0,0,0 0 4.50815642458101 0 0 5.78916201117318 1.84 0 6.16782122905028 2.008 1 1 chimp,human,macaque,marmoset,orangutan, lincRNA lincRNA A549@0.0284825,AG04450@0,BJ@0,GM12878@0.041988,H1HESC@0,HELAS3@0.125509,HEPG2@0.142038,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000254166.1 ENST00000521815.1 chr8:128197880-128215467 4 363 17218 intergenic -0.82 0 0,0,1 0 0,0,0 0 3.14786850969915 0 0 7.3128702520618 0 0 7.55633639214775 0 0 0 chimp,cow,horse,human,orangutan,panda, lincRNA lincRNA A549@0.37063,AG04450@0,BJ@0,GM12878@1.99523,H1HESC@0,HELAS3@35.5538,HEPG2@30.6533,HMEC@0.055785,HSMM@0.011818,HUVEC@0,K562@0,MCF7@0,NHEK@0.0708943,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000247844.1 ENST00000500112.1 chr8:128220111-128231333 2 2129 9091 intergenic 4.23 0 0,1,1 0 0,0,0 0 38.5494445055549 65.55 7.6763738844528 35.7970520294797 136.269 4.92015030530766 38.8284017159828 119.395 0 1 chimp,human,macaque,orangutan, lincRNA processed_transcript A549@1.08727,AG04450@0.0021035,BJ@0,GM12878@0.597096,H1HESC@0.013364,HELAS3@229.097,HEPG2@101.32,HMEC@0.040351,HSMM@0.012674,HUVEC@0.047618,K562@0.0138655,MCF7@0.0201675,NHEK@0.0724663,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000246228.2 ENST00000501396.1 chr8:128302062-128433619 3 927 130626 encompassing 4.45 0 0,1,1 0 0,0,0 0 19.9265536723164 0 0 21.8937960283558 7.625 0 26.3574479812595 10.929 0 0 chimp,human,macaque,marmoset,orangutan,panda, lincRNA processed_transcript A549@0.297596,AG04450@0.0179095,BJ@0.003067,GM12878@0.0075285,H1HESC@0,HELAS3@0.137299,HEPG2@0.0322635,HMEC@0.014311,HSMM@0.002608,HUVEC@0.0082015,K562@0,MCF7@0.0044215,NHEK@0.198856,NHLF@0,SKNSHRA@0.0064, 0 0 0 0 ENSG00000246228.2 ENST00000502082.1 chr8:128302062-128494384 6 1414 190898 encompassing 4.92 0 0,0,1 0 0,0,0 28.7510608203677 16.269819484751 5.434 33.8415841584158 18.6455070246938 14.41 34.548090523338 21.917343293277 14.806 0 0 cat,chimp,cow,dog,elephant,horse,human,macaque,marmoset,orangutan,panda,rabbit,rat, lincRNA processed_transcript A549@0.297596,AG04450@0.0179095,BJ@0.003067,GM12878@0.0075285,H1HESC@0,HELAS3@0.137299,HEPG2@0.0322635,HMEC@0.014311,HSMM@0.002608,HUVEC@0.0082015,K562@0,MCF7@0.0044215,NHEK@0.198856,NHLF@0,SKNSHRA@0.0064, 0 0 0 0 ENSG00000246228.2 ENST00000523825.1 chr8:128302063-128433619 2 787 130767 encompassing 4.45 0 0,1,1 0 0,0,0 0 19.9050677923329 0 0 21.870188962047 7.625 0 26.3290279657712 10.929 0 0 chimp,horse,human,macaque,marmoset,orangutan,panda,rabbit, lincRNA processed_transcript A549@0.297596,AG04450@0.0179095,BJ@0.003067,GM12878@0.0075285,H1HESC@0,HELAS3@0.137299,HEPG2@0.0322635,HMEC@0.014311,HSMM@0.002608,HUVEC@0.0082015,K562@0,MCF7@0.0044215,NHEK@0.198856,NHLF@0,SKNSHRA@0.0064, 0 0 0 0 ENSG00000253929.1 ENST00000521586.1 chr8:128351519-128404876 2 288 53067 intergenic 1.83 0 0,0,1 0 0,0,0 0 18.00791452315 0 0 20.4126104735523 0 0 21.1038121619839 0 0 1 chimp,human,macaque, lincRNA lincRNA A549@0.0116295,AG04450@0,BJ@0,GM12878@1.38499,H1HESC@0,HELAS3@0.088427,HEPG2@0.007347,HMEC@0.014119,HSMM@0.102393,HUVEC@0,K562@0,MCF7@0.0209555,NHEK@0.345069,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000246228.2 ENST00000502056.1 chr8:128455595-128494384 5 1407 37374 intergenic 4.92 0 0,0,0 0 0,0,0 28.8941009239517 9.63380960025686 5.434 34.0099502487562 13.7446353079681 14.41 34.7199715707178 14.7091828543908 14.806 0 0 cat,chimp,cow,horse,human,macaque,marmoset,orangutan,panda, lincRNA processed_transcript A549@0.297596,AG04450@0.0179095,BJ@0.003067,GM12878@0.0075285,H1HESC@0,HELAS3@0.137299,HEPG2@0.0322635,HMEC@0.014311,HSMM@0.002608,HUVEC@0.0082015,K562@0,MCF7@0.0044215,NHEK@0.198856,NHLF@0,SKNSHRA@0.0064, 0 0 0 0 ENSG00000249375.2 ENST00000502463.2 chr8:128698588-128746213 2 3222 44401 intergenic 2.41 1 0,0,0 0 0,0,0 0 7.608927726853 13.888 3.51924270639354 14.9031553343393 36.951 3.91558038485413 15.4141122947681 40.593 0 0 horse,human,macaque,orangutan, lincRNA processed_transcript A549@0.0676735,AG04450@0.014584,BJ@0.0233495,GM12878@0.0379195,H1HESC@0.002379,HELAS3@0.154047,HEPG2@0.010272,HMEC@0.038828,HSMM@0.021746,HUVEC@0.0037115,K562@0.026751,MCF7@0.284244,NHEK@0.0687773,NHLF@0.027107,SKNSHRA@0.002602, 0 0 0 0 ENSG00000249375.2 ENST00000519071.1 chr8:128712853-128746213 4 787 32567 intergenic 2.80 0 0,0,0 0 0,0,0 0 6.48948321920963 13.888 0 11.9473700371542 36.951 0 12.0449227745878 40.593 1 1 chimp,human,macaque,marmoset,orangutan, lincRNA processed_transcript A549@0.0676735,AG04450@0.014584,BJ@0.0233495,GM12878@0.0379195,H1HESC@0.002379,HELAS3@0.154047,HEPG2@0.010272,HMEC@0.038828,HSMM@0.021746,HUVEC@0.0037115,K562@0.026751,MCF7@0.284244,NHEK@0.0687773,NHLF@0.027107,SKNSHRA@0.002602, 0 0 0 0 ENSG00000249375.2 ENST00000518376.1 chr8:128742440-128746213 2 870 2901 intergenic -5.66 0 0,0,1 0 0,0,0 0 0 13.888 0 0.815925542916236 36.951 0 0.843846949327818 40.593 0 0 cat,chimp,cow,dog,horse,human,macaque,marmoset,mouse,orangutan,panda,rabbit,rat, lincRNA processed_transcript A549@0.0676735,AG04450@0.014584,BJ@0.0233495,GM12878@0.0379195,H1HESC@0.002379,HELAS3@0.154047,HEPG2@0.010272,HMEC@0.038828,HSMM@0.021746,HUVEC@0.0037115,K562@0.026751,MCF7@0.284244,NHEK@0.0687773,NHLF@0.027107,SKNSHRA@0.002602, 0 0 0 0 ENSG00000249859.2 ENST00000504719.2 chr8:128806779-128903221 3 751 95687 intergenic 3.74 0 0,1,0 1 0,1,0 0 2.1469583119964 0 39.0079893475366 3.69120152162781 17.681 39.4447403462051 4.49146697043485 18.767 0 0 cat,chimp,dog,elephant,guinea_pig,horse,human,macaque,marmoset,mouse,orangutan,panda,rabbit, lincRNA processed_transcript A549@21.1169,AG04450@6.41236,BJ@6.32044,GM12878@20.5861,H1HESC@13.23,HELAS3@20.2801,HEPG2@11.8774,HMEC@5.70614,HSMM@4.06892,HUVEC@10.5997,K562@15.3683,MCF7@37.5923,NHEK@7.64413,NHLF@2.70053,SKNSHRA@10.2467, 0 0 0 0 ENSG00000249859.2 ENST00000523328.1 chr8:128806803-128867565 2 341 60419 intergenic 2.82 0 0,1,1 1 0,1,0 0 0.905675367020308 0 45.9941348973607 4.19639517370364 25.566 47.6715542521994 4.8800211853887 26.785 0 0 cat,chimp,cow,elephant,human,macaque,marmoset,rabbit, lincRNA processed_transcript A549@21.1169,AG04450@6.41236,BJ@6.32044,GM12878@20.5861,H1HESC@13.23,HELAS3@20.2801,HEPG2@11.8774,HMEC@5.70614,HSMM@4.06892,HUVEC@10.5997,K562@15.3683,MCF7@37.5923,NHEK@7.64413,NHLF@2.70053,SKNSHRA@10.2467, 0 0 0 0 ENSG00000249859.2 ENST00000524165.1 chr8:128806803-128867565 3 455 60303 intergenic 7.23 0 0,1,1 1 0,1,0 0 0.90741754141585 0 37.3450549450549 4.17735436047958 25.566 38.6813186813187 4.86154917665788 26.785 0 0 cat,chimp,dog,elephant,human,orangutan,rabbit, lincRNA processed_transcript A549@21.1169,AG04450@6.41236,BJ@6.32044,GM12878@20.5861,H1HESC@13.23,HELAS3@20.2801,HEPG2@11.8774,HMEC@5.70614,HSMM@4.06892,HUVEC@10.5997,K562@15.3683,MCF7@37.5923,NHEK@7.64413,NHLF@2.70053,SKNSHRA@10.2467, 0 0 0 0 ENSG00000249859.2 ENST00000521951.1 chr8:128806803-128952700 3 1532 144361 intergenic 5.63 0 0,1,0 1 0,1,0 0 4.24880681070372 0 11.3642297650131 5.63673706887594 25.566 11.4007832898172 6.57307721614563 26.785 0 0 chimp,cow,human,macaque,marmoset,orangutan, lincRNA processed_transcript A549@21.1169,AG04450@6.41236,BJ@6.32044,GM12878@20.5861,H1HESC@13.23,HELAS3@20.2801,HEPG2@11.8774,HMEC@5.70614,HSMM@4.06892,HUVEC@10.5997,K562@15.3683,MCF7@37.5923,NHEK@7.64413,NHLF@2.70053,SKNSHRA@10.2467, 0 0 0 0 ENSG00000249859.2 ENST00000517525.1 chr8:128806806-128951855 3 389 144656 intergenic 7.23 0 0,1,1 1 0,1,0 0 4.24014213029532 0 31.2647814910026 5.65230616082291 26.811 32.4344473007712 6.58211895807986 28.051 0 0 chimp,cow,dog,elephant,human,marmoset,orangutan,pig,rabbit, lincRNA processed_transcript A549@21.1169,AG04450@6.41236,BJ@6.32044,GM12878@20.5861,H1HESC@13.23,HELAS3@20.2801,HEPG2@11.8774,HMEC@5.70614,HSMM@4.06892,HUVEC@10.5997,K562@15.3683,MCF7@37.5923,NHEK@7.64413,NHLF@2.70053,SKNSHRA@10.2467, 0 0 0 0 ENSG00000249859.2 ENST00000523427.1 chr8:128806821-128903198 3 935 95438 intergenic 3.74 0 0,1,1 1 0,1,0 0 2.15255977702802 0 12.4064171122995 3.73839560761961 31.791 12.3614973262032 4.54213206479599 33.115 0 0 cat,chimp,cow,dog,horse,human,macaque,marmoset,orangutan,panda,rabbit, lincRNA processed_transcript A549@21.1169,AG04450@6.41236,BJ@6.32044,GM12878@20.5861,H1HESC@13.23,HELAS3@20.2801,HEPG2@11.8774,HMEC@5.70614,HSMM@4.06892,HUVEC@10.5997,K562@15.3683,MCF7@37.5923,NHEK@7.64413,NHLF@2.70053,SKNSHRA@10.2467, 0 0 0 0 ENSG00000249859.2 ENST00000517790.1 chr8:128808000-128903178 2 597 94579 intergenic 3.74 0 0,1,1 0 0,0,0 0 2.17211008786306 0 46.3886097152429 2.97099779020713 46.722 45.998324958124 3.92727772549932 36.699 0 0 cat,chimp,cow,dog,elephant,guinea_pig,horse,human,marmoset,mouse,orangutan,panda,rabbit,rat, lincRNA processed_transcript A549@21.1169,AG04450@6.41236,BJ@6.32044,GM12878@20.5861,H1HESC@13.23,HELAS3@20.2801,HEPG2@11.8774,HMEC@5.70614,HSMM@4.06892,HUVEC@10.5997,K562@15.3683,MCF7@37.5923,NHEK@7.64413,NHLF@2.70053,SKNSHRA@10.2467, 0 0 0 0 ENSG00000249859.2 ENST00000522963.1 chr8:128808059-128903041 3 565 94413 intergenic 3.74 0 0,1,0 0 0,0,0 0 2.17592916229756 0 18.0601769911504 2.93825002912734 59.977 17.6778761061947 3.89481321428193 53.408 0 0 cat,chimp,cow,dog,elephant,horse,human,macaque,marmoset,mouse,orangutan,panda,rabbit, lincRNA processed_transcript A549@21.1169,AG04450@6.41236,BJ@6.32044,GM12878@20.5861,H1HESC@13.23,HELAS3@20.2801,HEPG2@11.8774,HMEC@5.70614,HSMM@4.06892,HUVEC@10.5997,K562@15.3683,MCF7@37.5923,NHEK@7.64413,NHLF@2.70053,SKNSHRA@10.2467, 0 0 0 0 ENSG00000249859.2 ENST00000518528.1 chr8:128808066-128903206 2 622 94516 intergenic 3.74 0 1,1,1 0 0,0,0 0 2.17355791612002 0 15.4308681672026 2.94491937872953 59.977 15.0739549839228 3.90059884040798 53.408 0 0 cat,chimp,cow,dog,elephant,guinea_pig,horse,human,marmoset,orangutan,panda,rabbit,rat, lincRNA processed_transcript A549@21.1169,AG04450@6.41236,BJ@6.32044,GM12878@20.5861,H1HESC@13.23,HELAS3@20.2801,HEPG2@11.8774,HMEC@5.70614,HSMM@4.06892,HUVEC@10.5997,K562@15.3683,MCF7@37.5923,NHEK@7.64413,NHLF@2.70053,SKNSHRA@10.2467, 0 0 0 0 ENSG00000249859.2 ENST00000523068.1 chr8:128808279-128903229 3 841 94105 intergenic 3.74 0 0,1,0 0 0,0,0 0 2.18305084745763 0 6.31510107015458 2.957781201849 64.264 5.85850178359096 3.91763455714362 57.857 0 0 chimp,guinea_pig,human,macaque,marmoset,orangutan,rat, lincRNA processed_transcript A549@21.1169,AG04450@6.41236,BJ@6.32044,GM12878@20.5861,H1HESC@13.23,HELAS3@20.2801,HEPG2@11.8774,HMEC@5.70614,HSMM@4.06892,HUVEC@10.5997,K562@15.3683,MCF7@37.5923,NHEK@7.64413,NHLF@2.70053,SKNSHRA@10.2467, 0 0 0 0 ENSG00000249859.2 ENST00000521122.1 chr8:128866974-128902987 2 219 35792 intergenic 3.74 0 0,0,0 0 0,0,0 0 4.21088511399195 0 24.2511415525114 2.88452726866339 22.04 22.4977168949772 3.87365891819401 20.042 0 0 chimp,cow,dog,elephant,human,macaque,marmoset,orangutan,panda,pig,rat, lincRNA processed_transcript A549@21.1169,AG04450@6.41236,BJ@6.32044,GM12878@20.5861,H1HESC@13.23,HELAS3@20.2801,HEPG2@11.8774,HMEC@5.70614,HSMM@4.06892,HUVEC@10.5997,K562@15.3683,MCF7@37.5923,NHEK@7.64413,NHLF@2.70053,SKNSHRA@10.2467, 0 0 0 0 ENSG00000249859.2 ENST00000513868.2 chr8:128902874-129113499 8 1691 208920 encompassing 5.63 0 1,1,1 0 0,0,0 0 3.07933180164656 8.97 2.34476641040804 6.36153551598698 23.641 2.21052631578947 7.0272400919012 24.509 1 1 chimp,human,macaque,marmoset,orangutan, lincRNA processed_transcript A549@21.1169,AG04450@6.41236,BJ@6.32044,GM12878@20.5861,H1HESC@13.23,HELAS3@20.2801,HEPG2@11.8774,HMEC@5.70614,HSMM@4.06892,HUVEC@10.5997,K562@15.3683,MCF7@37.5923,NHEK@7.64413,NHLF@2.70053,SKNSHRA@10.2467, 0 0 0 0 ENSG00000249859.2 ENST00000520913.1 chr8:128902892-128944941 2 582 41465 intergenic 3.57 0 0,1,1 0 0,0,0 0 9.83783914144459 8.97 5.84020618556701 10.693187025202 23.641 5.446735395189 12.0660074761847 24.509 0 0 cat,chimp,cow,elephant,horse,human,macaque,orangutan,panda,rabbit, lincRNA processed_transcript A549@21.1169,AG04450@6.41236,BJ@6.32044,GM12878@20.5861,H1HESC@13.23,HELAS3@20.2801,HEPG2@11.8774,HMEC@5.70614,HSMM@4.06892,HUVEC@10.5997,K562@15.3683,MCF7@37.5923,NHEK@7.64413,NHLF@2.70053,SKNSHRA@10.2467, 0 0 0 0 ENSG00000249859.2 ENST00000519481.1 chr8:128902923-129008896 3 539 105430 encompassing -0.21 0 0,1,1 0 0,0,0 0 4.88990799582661 8.97 7.35621521335807 7.56386227828891 23.641 6.93506493506493 8.30663947642986 24.509 0 0 cat,chimp,cow,elephant,horse,human,macaque,marmoset,orangutan,panda,rabbit, lincRNA processed_transcript A549@21.1169,AG04450@6.41236,BJ@6.32044,GM12878@20.5861,H1HESC@13.23,HELAS3@20.2801,HEPG2@11.8774,HMEC@5.70614,HSMM@4.06892,HUVEC@10.5997,K562@15.3683,MCF7@37.5923,NHEK@7.64413,NHLF@2.70053,SKNSHRA@10.2467, 0 0 0 0 ENSG00000249859.2 ENST00000517838.1 chr8:128903116-129008896 4 514 105260 encompassing 5.63 0 0,0,1 0 0,0,0 0 4.89780543416302 8.97 1.1011673151751 7.57607828234847 27.04 1.10505836575875 8.32005510165305 27.679 0 0 cat,chimp,cow,dog,elephant,horse,human,macaque,marmoset,orangutan,rabbit, lincRNA processed_transcript A549@21.1169,AG04450@6.41236,BJ@6.32044,GM12878@20.5861,H1HESC@13.23,HELAS3@20.2801,HEPG2@11.8774,HMEC@5.70614,HSMM@4.06892,HUVEC@10.5997,K562@15.3683,MCF7@37.5923,NHEK@7.64413,NHLF@2.70053,SKNSHRA@10.2467, 0 0 0 0 ENSG00000250002.1 ENST00000507144.1 chr8:128938355-128943402 2 4058 987 intergenic 3.89 0 0,0,0 0 0,0,0 22.8501724987679 0 0 34.843026121242 0 0 38.4208969935929 0 0 1 1 chimp,human,macaque,marmoset,orangutan, lincRNA lincRNA A549@0.810022,AG04450@0.281207,BJ@0.20435,GM12878@1.34986,H1HESC@1.36615,HELAS3@0.708114,HEPG2@0.994787,HMEC@0.372205,HSMM@0.188237,HUVEC@1.0663,K562@0.116215,MCF7@3.93243,NHEK@0.310498,NHLF@0.293026,SKNSHRA@0.361252, 0 0 0 0 ENSG00000249859.2 ENST00000512617.2 chr8:129001430-129082518 3 380 80704 intergenic 0 0 0,1,1 0 0,0,0 0 1.53403796590008 0 1.48947368421053 5.51118903647898 0 1.49473684210526 5.82942605075337 0 0 0 chimp,elephant,horse,human,macaque,marmoset,mouse,orangutan,pig,rabbit, lincRNA processed_transcript A549@21.1169,AG04450@6.41236,BJ@6.32044,GM12878@20.5861,H1HESC@13.23,HELAS3@20.2801,HEPG2@11.8774,HMEC@5.70614,HSMM@4.06892,HUVEC@10.5997,K562@15.3683,MCF7@37.5923,NHEK@7.64413,NHLF@2.70053,SKNSHRA@10.2467, 0 0 0 0 ENSG00000249859.2 ENST00000521600.1 chr8:129001463-129108824 4 404 106951 intergenic 0 0 0,0,1 0 0,0,0 0 1.50183728997391 0 1.4009900990099 5.48495105235108 0 1.40594059405941 6.05491299754093 0 0 0 chimp,elephant,horse,human,macaque,marmoset,mouse,orangutan,panda,rabbit, lincRNA processed_transcript A549@21.1169,AG04450@6.41236,BJ@6.32044,GM12878@20.5861,H1HESC@13.23,HELAS3@20.2801,HEPG2@11.8774,HMEC@5.70614,HSMM@4.06892,HUVEC@10.5997,K562@15.3683,MCF7@37.5923,NHEK@7.64413,NHLF@2.70053,SKNSHRA@10.2467, 0 0 0 0 ENSG00000249859.2 ENST00000522875.1 chr8:129001507-129108902 8 914 106467 intergenic 2.74 0 0,0,1 0 0,0,0 0 1.50866465665417 0 3.60393873085339 5.4842627292964 0 3.73851203501094 6.05567922454845 0 0 0 chimp,dog,human,macaque,marmoset,orangutan,rabbit, lincRNA processed_transcript A549@21.1169,AG04450@6.41236,BJ@6.32044,GM12878@20.5861,H1HESC@13.23,HELAS3@20.2801,HEPG2@11.8774,HMEC@5.70614,HSMM@4.06892,HUVEC@10.5997,K562@15.3683,MCF7@37.5923,NHEK@7.64413,NHLF@2.70053,SKNSHRA@10.2467, 0 0 0 0 ENSG00000249859.2 ENST00000523190.1 chr8:129021904-129113343 4 439 90994 intergenic 0 0 0,1,0 0 0,0,0 0 1.40438930039343 0 0 5.39577334769325 0 0 5.99324131261402 6.203 0 0 chimp,horse,human,macaque,marmoset,mouse,orangutan,rabbit, lincRNA processed_transcript A549@21.1169,AG04450@6.41236,BJ@6.32044,GM12878@20.5861,H1HESC@13.23,HELAS3@20.2801,HEPG2@11.8774,HMEC@5.70614,HSMM@4.06892,HUVEC@10.5997,K562@15.3683,MCF7@37.5923,NHEK@7.64413,NHLF@2.70053,SKNSHRA@10.2467, 0 0 0 0 ENSG00000249859.2 ENST00000522414.1 chr8:129108765-129112133 2 652 2714 intergenic -9.81 0 0,1,1 0 0,0,0 0 0 9.56 0 0 16.636 0 0 16.797 0 0 chimp,cow,elephant,horse,human,macaque,marmoset,orangutan,pig, lincRNA processed_transcript A549@21.1169,AG04450@6.41236,BJ@6.32044,GM12878@20.5861,H1HESC@13.23,HELAS3@20.2801,HEPG2@11.8774,HMEC@5.70614,HSMM@4.06892,HUVEC@10.5997,K562@15.3683,MCF7@37.5923,NHEK@7.64413,NHLF@2.70053,SKNSHRA@10.2467, 0 0 0 0 ENSG00000254275.1 ENST00000520206.1 chr8:129417515-129440162 6 2049 20588 intergenic 5.66 0 0,0,0 0 0,0,0 0 12.4859141247329 28.028 0 24.7126481445502 8.68 0 24.4710510977268 9.295 0 0 cat,chimp,dog,elephant,horse,human,marmoset,orangutan,panda, lincRNA lincRNA A549@0.0065645,AG04450@0.002591,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0.002556,HUVEC@0,K562@0,MCF7@0.001255,NHEK@0,NHLF@0.036366,SKNSHRA@0, 0 0 0 0 ENSG00000254275.1 ENST00000517583.1 chr8:129418507-129427627 5 800 8312 intergenic -2.66 0 0,1,0 0 0,0,0 0 22.7439846005775 0 0 26.8733156881617 0 0 24.740375360924 0 0 0 cat,chimp,dog,elephant,horse,human,macaque,marmoset,orangutan,panda,pig, lincRNA lincRNA A549@0.0065645,AG04450@0.002591,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0.002556,HUVEC@0,K562@0,MCF7@0.001255,NHEK@0,NHLF@0.036366,SKNSHRA@0, 0 0 0 0 ENSG00000253984.1 ENST00000520766.1 chr8:129432958-129573372 6 591 139813 intergenic 2.47 0 0,0,0 0 0,0,0 37.3739424703892 9.57148476894137 0 8.09475465313029 14.4901475542332 2.295 7.43147208121827 15.2908956963945 2.385 0 0 chimp,cow,dog,guinea_pig,horse,human,macaque,marmoset,orangutan,pig,rabbit, lincRNA lincRNA A549@0,AG04450@0.004875,BJ@0,GM12878@0,H1HESC@0.0281285,HELAS3@0,HEPG2@0.0099655,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0.0085315,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000253984.1 ENST00000523173.1 chr8:129571269-129573372 3 917 1182 intergenic 1.59 0 0,0,0 0 0,0,0 0 0 0 0 5.37901861252115 2.295 0 5.58375634517767 2.385 0 1 chimp,human,macaque,orangutan, lincRNA lincRNA A549@0,AG04450@0.004875,BJ@0,GM12878@0,H1HESC@0.0281285,HELAS3@0,HEPG2@0.0099655,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0.0085315,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000253984.1 ENST00000520824.1 chr8:129571960-129573372 2 890 520 intergenic 1.59 0 0,0,0 0 0,0,0 0 0 0 0 12.2269230769231 2.295 0 12.6923076923077 2.385 0 1 chimp,human,macaque,orangutan, lincRNA retained_intron A549@0,AG04450@0.004875,BJ@0,GM12878@0,H1HESC@0.0281285,HELAS3@0,HEPG2@0.0099655,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0.0085315,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000253466.1 ENST00000518044.1 chr8:129573252-129576925 2 570 3101 intergenic 0.36 0 0,1,0 0 0,0,0 0 0 0 0 0.740083843921316 0 0 0.769106739761367 0 0 0 cat,chimp,horse,human,macaque,marmoset,orangutan,pig,rabbit, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0.016703,HELAS3@0,HEPG2@0.0069075,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000250400.2 ENST00000509893.1 chr8:130228728-130253496 3 1145 23619 intergenic -1.70 1 0,0,1 0 0,0,0 117.254148471616 13.8140056733985 95.094 84.7650655021834 23.0060121088954 93.813 110.314410480349 25.5192006435497 99.816 0 0 chimp,cow,guinea_pig,horse,human,macaque,marmoset,orangutan,panda,pig,rabbit, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0.080524,H1HESC@0.029819,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0.0116305,K562@5.51001,MCF7@0,NHEK@0,NHLF@0.006723,SKNSHRA@0, 0 0 0 0 ENSG00000229140.3 ENST00000523151.1 chr8:130363937-130587262 3 1493 221828 intergenic 4.69 1 1,1,1 0 0,1,0 11.2484929671802 10.9694853670411 48.96 3.1848626925653 15.8647555763925 67.176 6.1138647019424 15.6009475810087 69.104 0 0 chimp,cow,dog,elephant,guinea_pig,horse,human,macaque,marmoset,orangutan,panda,pig,rabbit, lincRNA lincRNA A549@0.003434,AG04450@0,BJ@0,GM12878@0.064633,H1HESC@0.005836,HELAS3@0.0584885,HEPG2@0,HMEC@0,HSMM@0.006076,HUVEC@0.042971,K562@20.7676,MCF7@0,NHEK@0.0524467,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000229140.3 ENST00000446592.3 chr8:130363937-130692485 4 1717 326825 intergenic -3.55 1 0,0,1 0 0,1,0 9.78101339545719 13.121970473495 0 5.38788584740827 16.9174971314924 0 8.02853814793244 17.0869150156812 0 0 0 chimp,cow,dog,elephant,guinea_pig,horse,human,macaque,marmoset,mouse,orangutan,panda,pig,rabbit,rat, lincRNA lincRNA A549@0.003434,AG04450@0,BJ@0,GM12878@0.064633,H1HESC@0.005836,HELAS3@0.0584885,HEPG2@0,HMEC@0,HSMM@0.006076,HUVEC@0.042971,K562@20.7676,MCF7@0,NHEK@0.0524467,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000229140.3 ENST00000520048.1 chr8:130364675-130587237 4 900 221656 intergenic -1.58 0 0,1,1 0 0,1,0 18.66 10.9779974374707 36.96 5.28333333333333 15.8770662648428 51.626 10.1422222222222 15.6130535604721 53.679 0 0 chimp,dog,horse,human,macaque,marmoset,orangutan,pig,rabbit, lincRNA lincRNA A549@0.003434,AG04450@0,BJ@0,GM12878@0.064633,H1HESC@0.005836,HELAS3@0.0584885,HEPG2@0,HMEC@0,HSMM@0.006076,HUVEC@0.042971,K562@20.7676,MCF7@0,NHEK@0.0524467,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000253926.1 ENST00000519048.1 chr8:130428195-130458098 3 278 29621 intergenic -12.78 0 0,0,0 0 0,0,0 0 7.16650349414267 0 8.59712230215827 11.4564666959252 0 0 11.1419938557105 0 0 0 cat,chimp,cow,elephant,horse,human,macaque,marmoset,mouse,orangutan,panda,rabbit,rat, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000254223.1 ENST00000522667.1 chr8:130691381-130695925 4 679 3859 intergenic -4.07 0 0,1,1 0 0,0,0 53.3431516936672 8.5719098211972 0 44.1811487481591 6.81083182171547 20.57 49.3078055964654 8.08240476807463 20.802 0 0 cat,chimp,cow,dog,guinea_pig,horse,human,macaque,marmoset,orangutan,panda,pig, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0.0199545,MCF7@0,NHEK@0.00570467,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000254317.1 ENST00000524100.1 chr8:130844547-130856750 3 914 11285 intronic 5.55 0 0,0,0 0 0,0,0 0 46.4283562250775 0 0 52.3346034559149 0 0 55.4985378821444 0 0 0 chimp,dog,horse,human,macaque,marmoset,orangutan, antisense antisense A549@0.004734,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0.0044875,HUVEC@0,K562@0,MCF7@0.002242,NHEK@0.02131,NHLF@0.0042085,SKNSHRA@0, 0 0 0 0 ENSG00000254263.1 ENST00000521014.1 chr8:130902711-130914004 2 465 10826 intronic -0.95 0 0,0,1 0 0,0,0 0 0 0 0 2.15592093109182 0 0 3.87576205431369 0 1 1 chimp,human,macaque,marmoset,orangutan, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000253720.1 ENST00000520146.1 chr8:130952102-130961640 4 545 8987 exonic -2.37 0 0,0,0 0 0,0,0 0 0.855457883609658 0 59.2697247706422 12.9662846333593 106.737 61.3174311926605 14.5669300100145 107.827 0 0 chimp,horse,human,macaque,marmoset,orangutan, lincRNA lincRNA A549@0,AG04450@0,BJ@0.008969,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0.023296,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0.0289285, 0 0 0 0 ENSG00000253656.1 ENST00000523502.1 chr8:131607545-131667958 3 2069 58340 intergenic 5.41 0 0,0,0 0 0,0,0 14.554857419043 5.17535138841275 24.552 27.7380376993717 7.98731573534453 6.9 24.631706138231 8.88510455947892 7.1 0 0 chimp,dog,guinea_pig,human,macaque,orangutan,panda,pig,rabbit,rat, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0.02008,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0.0051925, 0 0 0 0 ENSG00000253259.1 ENST00000520785.1 chr8:131904316-131905031 2 472 241 intronic -2.07 0 0,0,0 0 0,0,0 0 0 0 0 0 0 0 0 0 0 0 cat,chimp,dog,human,macaque,marmoset,orangutan,panda, sense_intronic sense_intronic A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0.0061325,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000253992.1 ENST00000523318.1 chr8:131947655-131961911 3 408 13844 exonic 4.09 1 0,1,0 0 0,0,0 148.926470588235 11.0616151401329 0 136.382352941176 9.02549841086391 0 151.838235294118 10.9289222767986 0 0 0 chimp,cow,elephant,guinea_pig,human,macaque,marmoset,orangutan,pig,rabbit,rat, antisense antisense A549@0.0495385,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0.0362045,K562@0,MCF7@0,NHEK@0,NHLF@0.0047475,SKNSHRA@0.0055205, 0 0 0 0 ENSG00000253407.1 ENST00000521490.1 chr8:132142635-132157128 3 488 14001 intergenic 2.46 0 0,0,1 0 0,0,0 0 3.38747232340547 0 0 2.68102278408685 0 0 3.52674808942218 9.54 0 0 chimp,cow,human,macaque,marmoset,orangutan, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000253507.1 ENST00000519695.1 chr8:132320792-132329830 5 849 8181 intergenic 2.44 0 0,1,0 0 0,0,0 57.469964664311 0 0 23.301531213192 0 0 25.1201413427562 0.178217821782178 0 0 1 chimp,human,macaque,orangutan, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@12.3102,HELAS3@0,HEPG2@0,HMEC@0.004632,HSMM@0,HUVEC@0.0064845,K562@0,MCF7@0.002354,NHEK@0,NHLF@0.0026395,SKNSHRA@0, 0 0 0 0 ENSG00000253507.1 ENST00000524275.1 chr8:132320792-132329879 5 879 8200 intergenic 2.44 0 0,1,1 0 0,0,0 79.3674630261661 0 0 28.4323094425484 0 0 33.1365187713311 0.17780487804878 0 0 1 human,orangutan, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@12.3102,HELAS3@0,HEPG2@0,HMEC@0.004632,HSMM@0,HUVEC@0.0064845,K562@0,MCF7@0.002354,NHEK@0,NHLF@0.0026395,SKNSHRA@0, 0 0 0 0 ENSG00000253507.1 ENST00000519005.1 chr8:132322719-132329753 4 727 6301 intergenic 2.44 0 0,1,0 0 0,0,0 21.7826685006878 0 0 9.52407152682256 0 0 12.7455295735901 0.231391842564672 0 0 1 chimp,human,macaque,orangutan, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@12.3102,HELAS3@0,HEPG2@0,HMEC@0.004632,HSMM@0,HUVEC@0.0064845,K562@0,MCF7@0.002354,NHEK@0,NHLF@0.0026395,SKNSHRA@0, 0 0 0 0 ENSG00000253521.1 ENST00000520457.1 chr8:133572745-133573726 1 981 0 intergenic -6.62 0 0,0,0 0 0,0,0 0 0 0 0 0 0 2.22935779816514 0 0 0 0 chimp,cow,elephant,human,macaque,marmoset,orangutan, lincRNA non_coding A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0.052768, 0 0 0 0 ENSG00000223697.1 ENST00000429151.1 chr8:133850375-133856543 3 770 5394 exonic -1.00 0 0,0,0 0 0,0,0 51.3662337662338 42.5591397849462 10.764 53.6727272727273 36.5087133852429 14.35 46.5272727272727 44.7855024100853 14.7 0 0 chimp,human,macaque,marmoset,panda, antisense antisense A549@0,AG04450@0.038298,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0.005898,HUVEC@0.006909,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000253561.1 ENST00000517695.1 chr8:134783652-134826780 3 563 42561 intergenic 4.40 0 0,0,0 0 0,0,0 8.98756660746004 2.15756208735697 0 0 0.693310777472334 0 0 0.903973120932309 0 0 0 chimp,horse,human,macaque,marmoset,orangutan,pig, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000253165.1 ENST00000517380.1 chr8:134787794-134789595 3 1038 759 intergenic 1.75 1 0,0,0 0 0,0,0 30.2533718689788 65.6758893280632 0 14.1059730250482 10.8234519104084 0 14.47591522158 18.4044795783926 0 1 1 chimp,human,macaque,marmoset,orangutan, lincRNA lincRNA A549@0,AG04450@0.01239,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000253593.1 ENST00000520149.1 chr8:134898739-134914575 4 503 15327 intergenic 6.42 1 0,0,0 0 0,0,0 0 4.13316369804919 0 0 5.89724016441574 4.824 0 6.91355124942911 5.642 0 0 chimp,human,macaque,marmoset,orangutan,rabbit, lincRNA lincRNA A549@0.021792,AG04450@0.0088415,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0.0119865,NHEK@0,NHLF@0,SKNSHRA@0.022406, 0 0 0 0 ENSG00000253627.1 ENST00000523317.1 chr8:135224108-135332690 2 424 108156 intergenic -0.95 0 0,0,0 0 0,0,0 70.9811320754717 6.08896408890861 0 55.311320754717 9.03588335367432 0 55.4150943396226 9.7842745663671 0 0 0 chimp,cow,dog,guinea_pig,horse,human,marmoset, lincRNA lincRNA A549@0.0174775,AG04450@0.0110565,BJ@0,GM12878@0.0248345,H1HESC@0,HELAS3@0,HEPG2@0.143954,HMEC@0,HSMM@0,HUVEC@0.012537,K562@0,MCF7@0.0386115,NHEK@0.0247407,NHLF@0.0045295,SKNSHRA@0, 0 0 0 0 ENSG00000248492.1 ENST00000505776.1 chr8:135610314-135612932 2 937 1679 exonic 4.30 0 0,0,1 0 0,0,0 182.823906083244 12.0071471113758 0 220.435432230523 0.569386539606909 0 211.354322305229 0.662298987492555 0 0 0 cat,chimp,dog,guinea_pig,horse,human,macaque,marmoset,orangutan,pig, antisense antisense A549@0,AG04450@0,BJ@0,GM12878@0.033146,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000254028.1 ENST00000521444.1 chr8:135844990-135846725 2 847 886 intergenic 1.95 0 0,1,1 0 0,0,0 0 0 8.36 0 0 162.621 0 0 124.725 0 0 cat,chimp,cow,horse,human,macaque,marmoset,orangutan,panda,pig, lincRNA lincRNA A549@0.0931035,AG04450@0.086884,BJ@0.0115995,GM12878@0.186441,H1HESC@0.0935935,HELAS3@0.166152,HEPG2@0.062601,HMEC@0,HSMM@0,HUVEC@0.0251625,K562@0.196528,MCF7@0.303812,NHEK@0.0091,NHLF@0.0045965,SKNSHRA@0.229118, 0 0 0 0 ENSG00000253433.1 ENST00000519500.1 chr8:135850312-135854880 3 516 4048 intergenic 2.22 0 0,0,1 0 0,0,0 36.7596899224806 29.0970849802372 10.045 0.961240310077519 19.1183300395257 0 1.02713178294574 24.233942687747 5.589 0 0 chimp,elephant,horse,human,macaque,orangutan, lincRNA lincRNA A549@0.010644,AG04450@0.0228165,BJ@0,GM12878@0.047119,H1HESC@0,HELAS3@0.076741,HEPG2@0.020613,HMEC@0.007889,HSMM@0,HUVEC@0,K562@0.070803,MCF7@0.0623455,NHEK@0,NHLF@0,SKNSHRA@0.0369835, 0 0 0 0 ENSG00000251218.1 ENST00000505083.1 chr8:135862178-135894142 3 2093 29867 intergenic 3.75 0 0,0,0 0 0,0,0 8.93693263258481 4.95322596846017 43.112 2.01528905876732 7.45782971172197 90.052 2.05733397037745 8.72595171928885 92.303 0 0 cat,chimp,dog,horse,human,macaque,marmoset,orangutan,panda,pig, lincRNA lincRNA A549@0.0126315,AG04450@0.0015385,BJ@0,GM12878@0,H1HESC@0.0194975,HELAS3@0.004386,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0.00232,K562@0.004687,MCF7@0.0384295,NHEK@0,NHLF@0,SKNSHRA@0.010353, 0 0 0 0 ENSG00000254083.1 ENST00000522279.1 chr8:136246374-136311962 6 1234 64344 intergenic 6.10 0 0,0,0 0 0,0,0 0 11.5292645778938 0 2.34440842787682 12.6006931493224 0 4.25040518638574 13.0798520452567 0 0 0 chimp,dog,horse,human,macaque,panda, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000254083.1 ENST00000520101.1 chr8:136246479-136308798 4 624 61689 intergenic 6.10 0 0,0,0 0 0,0,0 0 11.7891358264845 0 0 13.0693964888392 0 3.50480769230769 13.5182123231046 0 0 0 cat,chimp,dog,horse,human,macaque,orangutan,panda,pig,rabbit, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000254083.1 ENST00000524070.1 chr8:136246480-136308792 5 597 61707 intergenic 6.10 0 0,0,0 0 0,0,0 0 11.7856969225534 0 0 13.06558413146 0 3.66331658291457 13.5142690456512 0 0 0 chimp,dog,human,macaque,marmoset,orangutan,panda,pig, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000254372.1 ENST00000518674.1 chr8:136468108-136469195 3 315 768 intergenic 0 0 0,0,1 0 0,0,0 4.8952380952381 18.0703125 0 0.876190476190476 10.78125 122.277 0 3.26822916666667 61.856 0 1 chimp,human,marmoset,orangutan, antisense antisense A549@0,AG04450@0,BJ@0,GM12878@0.014742,H1HESC@0,HELAS3@0.013126,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000253248.1 ENST00000502901.2 chr8:137059264-137178365 4 551 118544 intergenic 2.08 0 0,0,0 0 0,0,0 0 10.6163534215144 0 0 11.4486266702659 0 0 11.8289495883385 0 1 1 chimp,human,macaque,marmoset,orangutan, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000253248.1 ENST00000523150.1 chr8:137059290-137178238 5 568 118372 intergenic 0.72 0 0,0,0 0 0,0,0 0 10.6317794748758 0 0 11.4652620552158 0 0 11.8461376001081 0 0 0 chimp,dog,elephant,horse,human,macaque,marmoset,orangutan, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000253839.1 ENST00000523232.1 chr8:137501691-137542119 4 560 39862 intergenic -1.07 0 0,0,0 0 0,0,0 51.75 0 0 49.05 0.60017058853043 0 55.25 1.06482364156339 0 0 0 cat,chimp,horse,human,marmoset,opossum,orangutan, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@1.76067,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0.010553,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000254101.1 ENST00000524346.1 chr8:137543041-137909844 6 700 366093 intergenic 3.12 1 0,0,0 0 0,0,0 0 4.29663227649805 0 0 5.80409349536866 0 0 6.95937917414428 0 1 1 chimp,human,macaque,marmoset,orangutan, lincRNA lincRNA A549@0,AG04450@0.014422,BJ@0.105601,GM12878@0.403582,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0.0032015,HUVEC@0,K562@0,MCF7@0.017694,NHEK@0,NHLF@0.0126375,SKNSHRA@0, 0 0 0 0 ENSG00000254101.1 ENST00000520060.1 chr8:137543052-137743862 3 578 200228 intergenic 0 0 0,0,0 0 0,0,0 18.878892733564 4.45527598537667 0 0 5.92496553928522 0 0 6.84249955051242 0 0 0 cat,chimp,cow,dog,elephant,horse,human,macaque,marmoset,orangutan,panda,pig,rabbit, lincRNA lincRNA A549@0,AG04450@0.014422,BJ@0.105601,GM12878@0.403582,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0.0032015,HUVEC@0,K562@0,MCF7@0.017694,NHEK@0,NHLF@0.0126375,SKNSHRA@0, 0 0 0 0 ENSG00000254101.1 ENST00000517345.1 chr8:137549219-137810477 4 435 260817 intergenic 3.12 1 0,0,0 0 0,0,0 0 5.20656628977406 0 0 6.74442233443372 0 0 8.16756193039564 0 0 0 chimp,dog,horse,human,macaque,marmoset,orangutan, lincRNA lincRNA A549@0,AG04450@0.014422,BJ@0.105601,GM12878@0.403582,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0.0032015,HUVEC@0,K562@0,MCF7@0.017694,NHEK@0,NHLF@0.0126375,SKNSHRA@0, 0 0 0 0 ENSG00000254101.1 ENST00000521090.1 chr8:137793096-137822280 4 770 28408 intergenic 3.12 0 0,0,1 0 0,0,0 0 0.364333990425232 0 72.3675324675325 3.09110109828217 27.826 71.4311688311688 3.66826246127851 97.526 0 1 chimp,human,marmoset,orangutan, lincRNA lincRNA A549@0,AG04450@0.014422,BJ@0.105601,GM12878@0.403582,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0.0032015,HUVEC@0,K562@0,MCF7@0.017694,NHEK@0,NHLF@0.0126375,SKNSHRA@0, 0 0 0 0 ENSG00000254101.1 ENST00000520068.1 chr8:137802076-137827931 3 709 25142 intergenic 3.12 0 0,0,0 0 0,0,0 0 0.411661761196404 0 0 6.66028955532575 2.367 0 7.17798902235304 5.4 0 1 chimp,human,orangutan, lincRNA lincRNA A549@0,AG04450@0.014422,BJ@0.105601,GM12878@0.403582,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0.0032015,HUVEC@0,K562@0,MCF7@0.017694,NHEK@0,NHLF@0.0126375,SKNSHRA@0, 0 0 0 0 ENSG00000254101.1 ENST00000521097.1 chr8:137802077-137909844 5 482 107277 intergenic 3.12 1 0,0,0 0 0,0,0 0 2.10069259953205 0 0 4.13902327619154 2.367 0 4.74895830420314 5.4 1 1 chimp,human,macaque,marmoset,orangutan, lincRNA lincRNA A549@0,AG04450@0.014422,BJ@0.105601,GM12878@0.403582,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0.0032015,HUVEC@0,K562@0,MCF7@0.017694,NHEK@0,NHLF@0.0126375,SKNSHRA@0, 0 0 0 0 ENSG00000254101.1 ENST00000521034.1 chr8:137809516-137997178 4 428 187228 intergenic -1.14 0 0,0,0 0 0,0,0 0 3.84233127523661 0 0 5.23570726600722 0 0 7.37391308992245 0 1 1 chimp,human,macaque,marmoset,orangutan, lincRNA lincRNA A549@0,AG04450@0.014422,BJ@0.105601,GM12878@0.403582,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0.0032015,HUVEC@0,K562@0,MCF7@0.017694,NHEK@0,NHLF@0.0126375,SKNSHRA@0, 0 0 0 0 ENSG00000253288.1 ENST00000518973.1 chr8:138821687-139095813 3 4168 269954 intergenic 2.19 0 0,0,0 0 0,0,0 0 5.04233684257318 0 0 6.90556909695726 0 0.408109404990403 8.18752824555295 0 0 0 chimp,cow,dog,human,macaque,marmoset,orangutan,pig,rabbit, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0.003057,H1HESC@0,HELAS3@0.0101805,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000254361.1 ENST00000519652.1 chr8:138864570-138941287 3 538 76175 intergenic -2.56 0 0,0,0 0 0,0,0 0 8.3285723662619 0 0 12.877243190023 0 0 14.4480997702658 0 0 1 chimp,human,marmoset, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000253988.1 ENST00000521793.1 chr8:139075511-139085483 2 594 9376 intergenic 0.86 1 0,0,0 0 0,0,0 0 0 0 0 1.625 0 0 1.73400170648464 0 0 1 chimp,human,orangutan, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0.011728,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000253432.1 ENST00000519306.1 chr8:140108548-140115073 3 482 6039 intergenic -4.10 0 0,0,0 0 0,0,0 0 0 0 0 0 0 0 0 0 1 1 chimp,human,macaque,marmoset,orangutan, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000253783.1 ENST00000517640.1 chr8:140126436-140140196 3 549 13207 intergenic -6.22 0 0,0,0 0 0,0,0 0 0 0 0 0 0 0 0 0 0 1 chimp,human,macaque,orangutan, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000254258.1 ENST00000522373.1 chr8:140472305-140475259 2 1035 1917 intergenic 1.28 0 0,0,1 0 0,0,0 0 0 4.62 0 0 0 0 0 0 0 0 NA lincRNA lincRNA A549@0.0428105,AG04450@0.020574,BJ@0,GM12878@0.100096,H1HESC@0.102692,HELAS3@0,HEPG2@0.136125,HMEC@0,HSMM@0.273271,HUVEC@0.009379,K562@0.0266025,MCF7@0.192322,NHEK@0.0225187,NHLF@0.003742,SKNSHRA@0.0766675, 95 2 0 0 ENSG00000253574.1 ENST00000518354.1 chr8:140923482-140928864 3 450 4928 intronic 4.06 0 0,0,1 0 0,0,0 0 0 57.675 1.02444444444444 0 36.445 0.953333333333333 1.19724025974026 33.254 1 1 chimp,human,macaque,marmoset,orangutan, antisense antisense A549@0,AG04450@0,BJ@0,GM12878@0.007348,H1HESC@0.0054625,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000253574.1 ENST00000521883.1 chr8:140927043-140928864 2 317 1502 intronic 4.06 0 0,1,1 0 0,0,0 0 0 0 1.45425867507886 0 0 1.35331230283912 0 0 1 1 chimp,human,macaque,marmoset,orangutan, antisense antisense A549@0,AG04450@0,BJ@0,GM12878@0.007348,H1HESC@0.0054625,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000253266.1 ENST00000517606.1 chr8:142065389-142070695 5 1059 4239 intergenic 3.56 0 0,0,1 0 0,0,0 0 0 0 0 2.87048832271762 0 0 4.54187308327436 0 1 1 chimp,human,macaque,marmoset,orangutan, lincRNA lincRNA A549@0,AG04450@0.011005,BJ@0.0192015,GM12878@0,H1HESC@0.021844,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0.116231,NHEK@0,NHLF@0.0018135,SKNSHRA@0.004272, 0 0 0 0 ENSG00000253266.1 ENST00000522882.1 chr8:142069431-142070567 2 557 577 intergenic 0 0 0,0,1 0 0,0,0 0 0 0 4.57809694793537 0 9.618 16.6032315978456 0 10.005 0 0 chimp,elephant,human,macaque,marmoset,orangutan, lincRNA lincRNA A549@0,AG04450@0.011005,BJ@0.0192015,GM12878@0,H1HESC@0.021844,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0.116231,NHEK@0,NHLF@0.0018135,SKNSHRA@0.004272, 0 0 0 0 ENSG00000253210.1 ENST00000520885.1 chr8:142136143-142138220 2 481 1594 intronic -2.73 0 0,1,1 1 0,0,0 0 0 34.44 0 0 36.47 0 0 32.211 0 0 chimp,horse,human,macaque,marmoset,orangutan,pig, antisense antisense A549@0.991922,AG04450@0.406257,BJ@0.463062,GM12878@0.488529,H1HESC@0.0536945,HELAS3@0.31407,HEPG2@0.148335,HMEC@0.228892,HSMM@0.068036,HUVEC@0.0787655,K562@0.118163,MCF7@0.340843,NHEK@0.159368,NHLF@0.168323,SKNSHRA@0.86151, 0 0 0 0 ENSG00000253210.1 ENST00000517908.1 chr8:142136390-142140060 2 503 3165 intronic 0 0 0,0,0 0 0,0,0 0 10.8815165876777 0 0 11.522906793049 0 0 10.1772511848341 0 1 1 chimp,human,macaque,marmoset,orangutan, antisense antisense A549@0.991922,AG04450@0.406257,BJ@0.463062,GM12878@0.488529,H1HESC@0.0536945,HELAS3@0.31407,HEPG2@0.148335,HMEC@0.228892,HSMM@0.068036,HUVEC@0.0787655,K562@0.118163,MCF7@0.340843,NHEK@0.159368,NHLF@0.168323,SKNSHRA@0.86151, 0 0 0 0 ENSG00000253307.1 ENST00000517658.1 chr8:142262385-142263391 2 395 609 intronic 17.70 0 0,0,0 0 0,0,0 0 0 96.146 0 0 84.836 24.2556962025316 26.927750410509 112.861 0 0 cat,chimp,cow,dog,elephant,horse,human,macaque,marmoset,mouse,opossum,orangutan,panda,pig,platypus,rabbit,rat, antisense antisense A549@0.297084,AG04450@0.048176,BJ@0.021667,GM12878@0,H1HESC@0.114285,HELAS3@0.0256025,HEPG2@0.117291,HMEC@0,HSMM@0,HUVEC@0,K562@0.263097,MCF7@1.99138,NHEK@0.386113,NHLF@0,SKNSHRA@0.221734, 0 0 0 0 ENSG00000254197.1 ENST00000520606.1 chr8:142288327-142302961 2 292 14340 intronic 1.48 0 0,1,0 0 0,0,0 0 2.5686889818689 0 0 6.24546722454672 0 0 7.54853556485356 0 0 1 human,marmoset,orangutan, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000254291.1 ENST00000523604.1 chr8:142336229-142337236 2 411 594 intergenic 4.14 1 0,1,0 0 0,0,0 0 0 0 0 6.97138047138047 2.367 0 7.06902356902357 2.385 0 1 chimp,human,marmoset,orangutan, antisense antisense A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0.0059915,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000253595.1 ENST00000521073.1 chr8:142350648-142354720 4 792 3274 intergenic 3.90 1 1,1,1 1 0,0,0 0 0 0 0 8.23671350030544 0 0 8.26511912034209 0 1 1 chimp,human,macaque,marmoset,orangutan, antisense antisense A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0.0038575,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0.160702,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000253595.1 ENST00000518232.1 chr8:142352424-142354720 3 685 1607 intergenic 3.90 1 0,0,1 0 0,0,0 0 0 0 0 7.16241443683883 0 0 7.24579962663348 0 1 1 chimp,human,macaque,marmoset,orangutan, antisense antisense A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0.0038575,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0.160702,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000244998.1 ENST00000501440.1 chr8:142400039-142402674 2 1378 1255 intronic 8.37 0 1,1,1 0 0,0,0 0 37.1633466135458 0 0 53.7067729083665 0 0 75.6231075697211 0 1 1 chimp,human,macaque,marmoset,orangutan, lincRNA processed_transcript A549@0.027119,AG04450@0.004955,BJ@0.0186285,GM12878@0.210265,H1HESC@0.155528,HELAS3@0.108149,HEPG2@0.213205,HMEC@0,HSMM@0.0062855,HUVEC@0,K562@0.221023,MCF7@0.025769,NHEK@0,NHLF@0.002828,SKNSHRA@0.045273, 0 0 0 0 ENSG00000254008.1 ENST00000517704.1 chr8:143279717-143290364 3 1043 9600 intergenic 5.43 1 0,1,0 0 0,0,0 0 7.248125 20.108 0 9.84427083333333 21.023 0 13.3254166666667 38.284 0 1 chimp,human,macaque,orangutan, antisense antisense A549@0.0052815,AG04450@0,BJ@0,GM12878@0,H1HESC@0.010414,HELAS3@0,HEPG2@0.002608,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000253602.1 ENST00000521103.1 chr8:143328948-143329227 1 279 0 intronic -5.21 0 0,0,0 0 0,0,0 0 0 17.208 0 0 18.936 0 0 20.448 0 0 NA sense_intronic non_coding A549@0.028412,AG04450@0.04677,BJ@0.202313,GM12878@0,H1HESC@0,HELAS3@0.0240675,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000253753.1 ENST00000522374.1 chr8:143719949-143722027 2 503 1573 intergenic 3.94 1 1,1,1 1 0,0,0 0 0 0 0 6.6751430387794 0 0 10.5829624920534 0 0 1 chimp,human, antisense antisense A549@0,AG04450@0,BJ@0,GM12878@0.009283,H1HESC@0,HELAS3@0,HEPG2@0.025314,HMEC@0,HSMM@0,HUVEC@0,K562@0.69271,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000253741.1 ENST00000520572.1 chr8:143783670-143808391 3 5681 19036 exonic 4.88 1 0,1,0 0 0,0,0 0 0 117.763 0.269318781904594 0.247530993906283 242.306 0.622073578595318 1.23844295019962 296.238 1 1 chimp,human,macaque,marmoset,orangutan, antisense antisense A549@0.331981,AG04450@0.0259695,BJ@0.083578,GM12878@0.0604995,H1HESC@0.022837,HELAS3@0.240918,HEPG2@0.0387095,HMEC@0.025934,HSMM@0.064416,HUVEC@0.0809035,K562@0.001681,MCF7@0.502182,NHEK@0.017235,NHLF@0.0351515,SKNSHRA@0.133479, 0 0 0 0 ENSG00000253806.1 ENST00000519782.1 chr8:143808701-143809108 2 338 67 exonic 0 0 1,1,1 0 0,0,0 152.514792899408 300 45.124 322.408284023669 500 100.496 419.227810650888 587 111.941 0 0 chimp,cow,dog,guinea_pig,human,marmoset,mouse,opossum,orangutan,panda,rabbit,rat, antisense antisense A549@0.0279625,AG04450@0,BJ@0,GM12878@0,H1HESC@0.0584345,HELAS3@0.114889,HEPG2@0.0285785,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0.143671,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000253196.1 ENST00000523657.1 chr8:143844534-143847845 2 668 2641 intronic 2.68 1 1,1,1 0 0,0,0 0 0 0 0 9.99166982203711 0 0 12.1382052252935 0 0 1 chimp,human,macaque,orangutan, antisense antisense A549@0.0032395,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@1.0591,HEPG2@16.5289,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0.643647,NHEK@0,NHLF@0,SKNSHRA@0.0385415, 0 0 0 0 ENSG00000253715.1 ENST00000510610.2 chr8:143866790-143893536 3 599 26143 exonic -2.27 0 0,1,0 0 0,0,0 0 3.44034732050645 0 20.7095158597663 4.75679914317408 9.363 30.6176961602671 7.66277779902842 10.892 0 0 chimp,human,macaque,marmoset,mouse,orangutan,rat, antisense antisense A549@0,AG04450@0,BJ@0,GM12878@0.009716,H1HESC@0,HELAS3@0.0044085,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0.217783,NHEK@0.025204,NHLF@0,SKNSHRA@0, 1 96 0 0 ENSG00000253728.1 ENST00000519281.1 chr8:143915554-143916204 2 224 424 intronic 0 0 0,0,1 0 0,0,0 0 0 0 0 0 0 0 0 0 0 1 chimp,human,macaque,orangutan, antisense antisense A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000253728.1 ENST00000519411.1 chr8:143915554-143916356 2 347 453 exonic 0 0 0,1,1 0 0,0,0 0 0 0 0 0 0 0 0 0 1 1 chimp,human,macaque,marmoset,orangutan, antisense antisense A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000247317.3 ENST00000517833.1 chr8:144063155-144099807 2 993 35657 exonic -3.32 0 0,1,1 1 0,0,0 0 12.8825476063606 0 0 22.8922792158622 0 0 37.7508764057548 0 1 1 chimp,human,macaque,marmoset,orangutan, lincRNA processed_transcript A549@0.183196,AG04450@0.221606,BJ@0.857475,GM12878@0.25178,H1HESC@0.152035,HELAS3@0.3034,HEPG2@0.282355,HMEC@0.065975,HSMM@0.007293,HUVEC@0.0208435,K562@0.319373,MCF7@0.373607,NHEK@0.182685,NHLF@0.599948,SKNSHRA@0.579793, 0 0 0 0 ENSG00000247317.3 ENST00000522060.1 chr8:144063466-144099798 3 831 35497 exonic 6.85 0 1,1,1 1 0,0,0 0 12.9406146998338 0 0 22.9954644054427 0 0 37.9210355804716 0 1 1 chimp,human,macaque,marmoset,orangutan, lincRNA processed_transcript A549@0.183196,AG04450@0.221606,BJ@0.857475,GM12878@0.25178,H1HESC@0.152035,HELAS3@0.3034,HEPG2@0.282355,HMEC@0.065975,HSMM@0.007293,HUVEC@0.0208435,K562@0.319373,MCF7@0.373607,NHEK@0.182685,NHLF@0.599948,SKNSHRA@0.579793, 0 0 0 0 ENSG00000247317.3 ENST00000518024.1 chr8:144076293-144093994 2 873 16826 intergenic 0.68 0 0,0,1 0 0,0,0 0 27.3001901818614 0 0 48.512421252823 0 19.8121420389462 63.1547604897183 0 0 1 chimp,human,orangutan, lincRNA processed_transcript A549@0.183196,AG04450@0.221606,BJ@0.857475,GM12878@0.25178,H1HESC@0.152035,HELAS3@0.3034,HEPG2@0.282355,HMEC@0.065975,HSMM@0.007293,HUVEC@0.0208435,K562@0.319373,MCF7@0.373607,NHEK@0.182685,NHLF@0.599948,SKNSHRA@0.579793, 0 0 0 0 ENSG00000247317.3 ENST00000502167.2 chr8:144089170-144099814 3 1778 8862 exonic 13.94 0 0,1,1 1 0,0,0 0 0 0 0 0 0 0 5.23549988715866 0 1 1 chimp,human,macaque,marmoset,orangutan, lincRNA processed_transcript A549@0.183196,AG04450@0.221606,BJ@0.857475,GM12878@0.25178,H1HESC@0.152035,HELAS3@0.3034,HEPG2@0.282355,HMEC@0.065975,HSMM@0.007293,HUVEC@0.0208435,K562@0.319373,MCF7@0.373607,NHEK@0.182685,NHLF@0.599948,SKNSHRA@0.579793, 0 0 0 0 ENSG00000247317.3 ENST00000518831.1 chr8:144098083-144099854 2 757 1012 exonic 3.95 0 0,1,0 1 0,0,0 0 0 0 0 0 0 0 10.5662055335968 0 1 1 chimp,human,macaque,marmoset,orangutan, lincRNA processed_transcript A549@0.183196,AG04450@0.221606,BJ@0.857475,GM12878@0.25178,H1HESC@0.152035,HELAS3@0.3034,HEPG2@0.282355,HMEC@0.065975,HSMM@0.007293,HUVEC@0.0208435,K562@0.319373,MCF7@0.373607,NHEK@0.182685,NHLF@0.599948,SKNSHRA@0.579793, 0 0 0 0 ENSG00000253716.1 ENST00000523031.1 chr8:144362331-144363019 1 688 0 intergenic -4.43 1 0,0,1 0 0,0,0 0 0 0 0 0 0 0 0 3.888 1 1 chimp,human,macaque,marmoset,orangutan, antisense antisense A549@4.1101,AG04450@0.874809,BJ@1.21273,GM12878@3.3475,H1HESC@4.43632,HELAS3@3.90122,HEPG2@3.86203,HMEC@0.538146,HSMM@1.55751,HUVEC@0.999057,K562@8.17972,MCF7@3.34577,NHEK@0.734755,NHLF@0.970857,SKNSHRA@5.15817, 0 0 0 0 ENSG00000253716.1 ENST00000517411.1 chr8:144362336-144363830 3 642 848 intergenic -1.38 1 1,1,1 1 0,0,0 0 0 0 0 0 0 0 0 9.32 0 1 chimp,human,macaque,orangutan, antisense antisense A549@4.1101,AG04450@0.874809,BJ@1.21273,GM12878@3.3475,H1HESC@4.43632,HELAS3@3.90122,HEPG2@3.86203,HMEC@0.538146,HSMM@1.55751,HUVEC@0.999057,K562@8.17972,MCF7@3.34577,NHEK@0.734755,NHLF@0.970857,SKNSHRA@5.15817, 0 0 0 0 ENSG00000253716.1 ENST00000519852.1 chr8:144362998-144363420 2 326 94 intergenic -3.75 1 0,1,1 0 0,0,0 0 0 0 0 0 0 0 0 3.888 1 1 chimp,human,macaque,marmoset,orangutan, antisense antisense A549@4.1101,AG04450@0.874809,BJ@1.21273,GM12878@3.3475,H1HESC@4.43632,HELAS3@3.90122,HEPG2@3.86203,HMEC@0.538146,HSMM@1.55751,HUVEC@0.999057,K562@8.17972,MCF7@3.34577,NHEK@0.734755,NHLF@0.970857,SKNSHRA@5.15817, 0 0 0 0 ENSG00000253716.1 ENST00000518073.1 chr8:144362998-144363860 2 377 483 intergenic 0 1 1,1,1 1 0,0,0 0 0 0 0 0 0 0 0 9.32 1 1 chimp,human,macaque,marmoset,orangutan, antisense antisense A549@4.1101,AG04450@0.874809,BJ@1.21273,GM12878@3.3475,H1HESC@4.43632,HELAS3@3.90122,HEPG2@3.86203,HMEC@0.538146,HSMM@1.55751,HUVEC@0.999057,K562@8.17972,MCF7@3.34577,NHEK@0.734755,NHLF@0.970857,SKNSHRA@5.15817, 0 0 0 0 ENSG00000253716.1 ENST00000521207.1 chr8:144363196-144363780 2 427 155 intergenic -3.75 1 1,1,1 1 0,0,0 0 0 0 0 0 0 0 0 9.32 1 1 chimp,human,macaque,marmoset,orangutan, antisense antisense A549@4.1101,AG04450@0.874809,BJ@1.21273,GM12878@3.3475,H1HESC@4.43632,HELAS3@3.90122,HEPG2@3.86203,HMEC@0.538146,HSMM@1.55751,HUVEC@0.999057,K562@8.17972,MCF7@3.34577,NHEK@0.734755,NHLF@0.970857,SKNSHRA@5.15817, 0 0 0 0 ENSG00000253716.1 ENST00000524335.1 chr8:144363240-144363835 2 497 96 intergenic -3.75 1 1,1,1 1 0,0,0 0 0 0 0 0 0 0 0 9.32 1 1 chimp,human,macaque,marmoset,orangutan, antisense antisense A549@4.1101,AG04450@0.874809,BJ@1.21273,GM12878@3.3475,H1HESC@4.43632,HELAS3@3.90122,HEPG2@3.86203,HMEC@0.538146,HSMM@1.55751,HUVEC@0.999057,K562@8.17972,MCF7@3.34577,NHEK@0.734755,NHLF@0.970857,SKNSHRA@5.15817, 0 0 0 0 ENSG00000254389.1 ENST00000518049.1 chr8:144448801-144450718 1 1917 0 intergenic 7.55 1 1,1,1 1 0,1,0 0 0 0 0 0 24.262 3.1074595722483 0 26.175 1 1 chimp,human,macaque,marmoset,orangutan, antisense antisense A549@0.291964,AG04450@0.06916,BJ@0.110032,GM12878@0.022158,H1HESC@0.772925,HELAS3@0.371085,HEPG2@0.342644,HMEC@0.057641,HSMM@0.111767,HUVEC@0.194019,K562@0.443374,MCF7@1.34497,NHEK@0.0251777,NHLF@0.038479,SKNSHRA@0.488466, 0 0 0 0 ENSG00000253931.1 ENST00000523002.1 chr8:144494919-144499224 3 541 3760 intergenic 5.23 0 0,0,0 0 0,0,0 0 0 0 0 0 76.146 0 0 86.45 0 1 chimp,human,marmoset,orangutan, antisense antisense A549@0.113841,AG04450@0.0082405,BJ@0.0717155,GM12878@0.322656,H1HESC@0.53476,HELAS3@0.196121,HEPG2@1.11117,HMEC@0,HSMM@0.034857,HUVEC@0,K562@0.191507,MCF7@0.159263,NHEK@0.00234667,NHLF@0,SKNSHRA@0.272902, 0 0 0 0 ENSG00000254338.1 ENST00000519762.1 chr8:144499849-144501320 2 415 1054 intergenic 7.00 0 0,0,1 0 0,0,0 0 0 0 0 0 0 0 0 0 0 1 human,orangutan, antisense antisense A549@0.114986,AG04450@0.01075,BJ@0.063936,GM12878@0.493758,H1HESC@0.156739,HELAS3@0.0300295,HEPG2@1.91753,HMEC@0,HSMM@0.0641455,HUVEC@0,K562@0.310326,MCF7@0.175098,NHEK@0,NHLF@0,SKNSHRA@0.283123, 0 0 0 0 ENSG00000254859.1 ENST00000530600.1 chr8:144624143-144631899 2 496 7258 intergenic 0.16 0 0,0,1 0 0,0,0 0 0 0 0 0 0 0 0 0 0 1 chimp,human,macaque,orangutan, antisense antisense A549@1.49482,AG04450@0.655123,BJ@0.648843,GM12878@0.551641,H1HESC@0.203412,HELAS3@0.297315,HEPG2@1.46144,HMEC@0,HSMM@0.029368,HUVEC@0.0264655,K562@0.362263,MCF7@0,NHEK@0.005302,NHLF@0.093721,SKNSHRA@0.060151, 0 0 0 0 ENSG00000254144.1 ENST00000517300.1 chr8:144624280-144624570 1 290 0 intergenic -3.03 0 0,1,0 0 0,0,0 0 0 12.54 0 0 37.408 0 0 35.209 0 0 NA antisense non_coding A549@0,AG04450@0.016186,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000255050.1 ENST00000531730.1 chr8:144655660-144659567 5 1168 2731 exonic 25.33 0 0,0,1 0 0,0,0 60.0085616438356 30.6620285609667 0 120.095034246575 64.5335042109118 28.195 161.632705479452 87.1490296594654 35.652 0 0 cat,chimp,cow,dog,elephant,guinea_pig,horse,human,macaque,marmoset,orangutan,panda,rat, antisense antisense A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0.004525,HEPG2@0,HMEC@0.010472,HSMM@0,HUVEC@0,K562@0.0040735,MCF7@0.001714,NHEK@0.048221,NHLF@0,SKNSHRA@0.0023705, 0 0 0 0 ENSG00000254741.1 ENST00000529247.1 chr8:144661806-144662840 2 429 603 exonic -4.55 1 0,1,1 0 0,0,0 141.736596736597 126.149253731343 0 194.657342657343 149.232172470978 0 250.897435897436 185.323383084577 0 0 0 cat,chimp,cow,dog,elephant,guinea_pig,horse,human,macaque,marmoset,mouse,orangutan,panda,pig,platypus,rabbit,rat, antisense antisense A549@0.007202,AG04450@0.023874,BJ@0.022525,GM12878@0.0067855,H1HESC@0.0597485,HELAS3@0.076504,HEPG2@0.025031,HMEC@0.076002,HSMM@0,HUVEC@0.0137505,K562@0.0115995,MCF7@0.017576,NHEK@0.0760483,NHLF@0,SKNSHRA@0.0105465, 0 0 0 0 ENSG00000254812.1 ENST00000524808.1 chr8:144714241-144715926 2 699 984 intergenic 2.73 0 0,0,0 0 0,0,0 0 0 0 0 0 0 0 0 0 1 1 chimp,human,macaque,marmoset,orangutan, antisense antisense A549@0.477471,AG04450@0.163173,BJ@0.205477,GM12878@0.102259,H1HESC@0.165339,HELAS3@0.761148,HEPG2@0.76723,HMEC@0.017523,HSMM@0.0541535,HUVEC@0.169077,K562@0.308358,MCF7@1.60832,NHEK@0.0293233,NHLF@0.775013,SKNSHRA@0.557225, 0 0 0 0 ENSG00000181097.5 ENST00000531565.1 chr8:144778324-144780583 2 1961 296 intergenic 8.40 1 0,1,1 1 0,1,0 0 0 0 0 0 0 0 0 0 0 1 chimp,human,macaque,orangutan, antisense antisense A549@0.0267095,AG04450@0.0112725,BJ@0.018958,GM12878@0.034161,H1HESC@0.0150155,HELAS3@0.0749395,HEPG2@0.0563725,HMEC@0.006151,HSMM@0.010633,HUVEC@0.0215675,K562@0.011829,MCF7@0.15344,NHEK@0.039014,NHLF@0.0014025,SKNSHRA@0.0486905, 0 0 0 0 ENSG00000254574.1 ENST00000527579.1 chr8:144791177-144795754 4 370 4201 intergenic 4.59 1 0,1,0 0 0,0,0 0 0 0 0 2.83622946917401 0 8.82162162162162 18.5224946441324 0 0 1 chimp,human,macaque,orangutan, antisense antisense A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0.0124985,HEPG2@0.014587,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0.0216245,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000254548.1 ENST00000527908.1 chr8:144800416-144801061 2 297 346 exonic -0.70 0 0,1,1 0 0,0,0 0 0 15.18 146.979797979798 9.69653179190751 82.37 247.96632996633 14.0202312138728 134.666 0 0 cat,cow,dog,elephant,horse,human,macaque,mouse,orangutan,panda,platypus,rabbit,rat, antisense antisense A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0.0198785,HELAS3@0.030228,HEPG2@0.0287205,HMEC@0.232805,HSMM@0,HUVEC@0,K562@0,MCF7@0.22418,NHEK@0.078572,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000203499.6 ENST00000533004.1 chr8:144816310-144828507 4 2733 9458 intergenic 3.40 0 0,1,1 1 0,1,0 1.04939626783754 15.304186931698 95.623 6.79875594584705 26.9223937407486 141.775 9.10647639956092 27.3603298794671 148.092 0 1 chimp,human,macaque,orangutan, lincRNA processed_transcript A549@0.716251,AG04450@0.0034975,BJ@0.108997,GM12878@0.0224145,H1HESC@1.23988,HELAS3@3.55436,HEPG2@1.3202,HMEC@2.26562,HSMM@0.693241,HUVEC@0.0145155,K562@0.432431,MCF7@29.8834,NHEK@5.12491,NHLF@0.032806,SKNSHRA@0.0800195, 0 0 0 0 ENSG00000203499.6 ENST00000534398.1 chr8:144821566-144824305 3 579 2156 intergenic 4.02 0 0,1,0 1 0,1,0 0 0 18.504 1.28497409326425 0.460111317254174 53.1 2.11226252158895 0.792671614100185 55.343 0 0 chimp,human,macaque,orangutan,panda, lincRNA processed_transcript A549@0.716251,AG04450@0.0034975,BJ@0.108997,GM12878@0.0224145,H1HESC@1.23988,HELAS3@3.55436,HEPG2@1.3202,HMEC@2.26562,HSMM@0.693241,HUVEC@0.0145155,K562@0.432431,MCF7@29.8834,NHEK@5.12491,NHLF@0.032806,SKNSHRA@0.0800195, 0 0 0 0 ENSG00000203499.6 ENST00000435097.2 chr8:144823268-144828506 1 5238 0 intergenic 4.02 0 0,0,1 0 0,1,0 0 0 0 0 0 0 0 0 0 0 1 chimp,human,macaque,orangutan, lincRNA processed_transcript A549@0.716251,AG04450@0.0034975,BJ@0.108997,GM12878@0.0224145,H1HESC@1.23988,HELAS3@3.55436,HEPG2@1.3202,HMEC@2.26562,HSMM@0.693241,HUVEC@0.0145155,K562@0.432431,MCF7@29.8834,NHEK@5.12491,NHLF@0.032806,SKNSHRA@0.0800195, 0 0 0 0 ENSG00000254973.1 ENST00000529743.1 chr8:144840323-144853992 3 1806 11859 intergenic 11.88 0 0,1,0 0 0,0,0 0 5.99881946201197 0 13.531561461794 6.52500210810355 141.067 148.013289036545 6.14335104140315 120.999 0 0 chimp,guinea_pig,human,macaque,marmoset,orangutan, lincRNA lincRNA A549@0.213786,AG04450@0.007434,BJ@0,GM12878@0,H1HESC@0.013553,HELAS3@0.0343915,HEPG2@0.024126,HMEC@0.013581,HSMM@0.0064865,HUVEC@0.0065805,K562@0.0112025,MCF7@0.417941,NHEK@0.0141253,NHLF@0.037001,SKNSHRA@0, 0 0 0 0 ENSG00000214733.4 ENST00000534089.1 chr8:144871090-144872305 4 695 514 intergenic 23.51 0 0,0,0 0 0,1,0 0 0 0 166.58273381295 2.1011673151751 2.058 163.115107913669 4.24124513618677 2.163 0 0 chimp,cow,dog,elephant,guinea_pig,horse,human,macaque,marmoset,mouse,orangutan,panda,platypus,rabbit,rat, antisense antisense A549@0.0062105,AG04450@0,BJ@0,GM12878@0,H1HESC@0.0471475,HELAS3@0.0292575,HEPG2@0,HMEC@0.005858,HSMM@0,HUVEC@0.005681,K562@0.0236365,MCF7@0.024286,NHEK@0.0154333,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000214733.4 ENST00000527139.1 chr8:144871149-144872629 7 651 817 intergenic 14.73 0 0,1,1 0 0,1,0 0 0 0 248.215053763441 14.6891064871481 15.741 248.388632872504 17.9179926560588 16.134 0 0 chimp,cow,dog,elephant,guinea_pig,horse,human,macaque,marmoset,mouse,opossum,orangutan,panda,platypus,rat, antisense antisense A549@0.0062105,AG04450@0,BJ@0,GM12878@0,H1HESC@0.0471475,HELAS3@0.0292575,HEPG2@0,HMEC@0.005858,HSMM@0,HUVEC@0.005681,K562@0.0236365,MCF7@0.024286,NHEK@0.0154333,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000214733.4 ENST00000532625.1 chr8:144871685-144872445 3 425 331 intergenic 2.02 0 0,1,0 0 0,1,0 0 0 0 232.174117647059 8.61631419939577 58.842 235.501176470588 11.2084592145015 60.664 0 0 chimp,cow,dog,elephant,guinea_pig,horse,human,macaque,marmoset,mouse,opossum,orangutan,panda,rat, antisense antisense A549@0.0062105,AG04450@0,BJ@0,GM12878@0,H1HESC@0.0471475,HELAS3@0.0292575,HEPG2@0,HMEC@0.005858,HSMM@0,HUVEC@0.005681,K562@0.0236365,MCF7@0.024286,NHEK@0.0154333,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000204791.3 ENST00000528912.1 chr8:145104458-145106423 5 1385 572 exonic 4.87 0 0,1,1 0 0,1,0 0 0 0 212.309747292419 4.98426573426573 31.785 310.610108303249 14.548951048951 68.318 0 0 chimp,cow,dog,horse,human,macaque,marmoset,opossum,orangutan,panda,pig,rat, antisense antisense A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@3.50208,HELAS3@0.0182775,HEPG2@0.0132515,HMEC@0.011783,HSMM@0,HUVEC@0.0145475,K562@0,MCF7@0.0029585,NHEK@0.00189967,NHLF@0.0028075,SKNSHRA@0.0414315, 0 0 0 0 ENSG00000255224.1 ENST00000524499.1 chr8:145132905-145134168 1 1263 0 exonic 7.43 0 0,1,1 0 0,0,0 53.1472684085511 0 106.064 86.3111638954869 0 118.757 88.8582739509105 0 133.963 0 0 cat,chimp,elephant,horse,human,macaque,marmoset,opossum,panda,pig, antisense antisense A549@0.424179,AG04450@0.27269,BJ@0.334792,GM12878@0.344385,H1HESC@0.445694,HELAS3@0.422187,HEPG2@0.695103,HMEC@0.291548,HSMM@0.357235,HUVEC@0.48038,K562@0.458312,MCF7@0.253921,NHEK@0.361866,NHLF@0.477616,SKNSHRA@1.87472, 0 0 0 0 ENSG00000254690.1 ENST00000525023.1 chr8:145538253-145538801 2 442 104 exonic 0 0 1,1,1 0 0,1,1 16.8325791855204 0 0 18.9954751131222 0 0 26.6493212669683 0 0 0 0 cat,chimp,human,macaque,marmoset,orangutan,panda,pig, antisense antisense A549@0.453512,AG04450@0.183202,BJ@0.492082,GM12878@0.196162,H1HESC@0.459375,HELAS3@0.577822,HEPG2@1.22072,HMEC@0.165998,HSMM@0.0914145,HUVEC@0.971121,K562@1.21959,MCF7@0.33619,NHEK@0.70756,NHLF@0.104699,SKNSHRA@0.703099, 0 0 0 0 ENSG00000232600.2 ENST00000544423.1 chr8:145660602-145663650 4 551 2491 exonic 2.09 0 0,0,1 0 0,0,0 0 8.44319550381373 50.776 119.088929219601 39.845443596949 69.204 148.611615245009 102.714973906062 105.67 0 0 cat,chimp,cow,dog,elephant,horse,human,macaque,marmoset,orangutan,panda,pig,rabbit,rat, antisense antisense A549@0.02464,AG04450@0.0511755,BJ@0.0565715,GM12878@0,H1HESC@0,HELAS3@0.008853,HEPG2@0.00392,HMEC@0.014755,HSMM@0.0533805,HUVEC@0.219988,K562@0,MCF7@0.0515575,NHEK@0.018987,NHLF@0.0035155,SKNSHRA@0.053084, 0 0 0 0 ENSG00000232600.2 ENST00000442850.1 chr8:145663058-145665354 4 424 1866 exonic 0 0 0,0,0 0 0,0,0 0 0 3.585 5.10141509433962 22.9860664523044 97.297 178.537735849057 44.0675241157556 178.946 0 0 chimp,dog,human,macaque,marmoset,orangutan, antisense antisense A549@0.02464,AG04450@0.0511755,BJ@0.0565715,GM12878@0,H1HESC@0,HELAS3@0.008853,HEPG2@0.00392,HMEC@0.014755,HSMM@0.0533805,HUVEC@0.219988,K562@0,MCF7@0.0515575,NHEK@0.018987,NHLF@0.0035155,SKNSHRA@0.053084, 0 0 0 0 ENSG00000255456.1 ENST00000529377.1 chr8:145809424-145811872 2 396 2050 intronic -1.90 0 0,0,0 0 0,0,0 0 0 0 0 0 0 21.0606060606061 0 0 0 1 chimp,human,macaque,orangutan, antisense antisense A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000227518.1 ENST00000422679.1 chr9:27657-30891 2 2921 311 intergenic 2.01 1 0,0,0 0 0,0,0 0 0 0 0 0 0 0 0 0 0 0 chimp,human,macaque,marmoset,orangutan, antisense antisense A549@0.018632,AG04450@0.0298355,BJ@0.02495,GM12878@0.0482805,H1HESC@0.150119,HELAS3@0.016602,HEPG2@0.0266055,HMEC@0.010191,HSMM@0.0180665,HUVEC@0.006009,K562@0.220164,MCF7@0.087913,NHEK@0.00200633,NHLF@0.019718,SKNSHRA@0.065826, 0 0 0 0 ENSG00000225655.1 ENST00000429980.1 chr9:72701-88826 3 391 15730 intergenic 2.69 0 0,0,0 0 0,0,0 0 5.64017800381437 0 14.3478260869565 21.1265098537826 0 14.9104859335038 26.7606484424666 0 0 0 chimp,human,macaque,marmoset,orangutan, antisense antisense A549@0.004111,AG04450@0.225407,BJ@0.0420735,GM12878@0.01553,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0.0202205,HUVEC@0.00921,K562@0.0094335,MCF7@0,NHEK@0.00483533,NHLF@1.51979,SKNSHRA@0.031307, 0 0 0 0 ENSG00000225655.1 ENST00000458364.1 chr9:72706-75298 2 526 2064 intergenic -0.94 1 0,0,0 0 0,0,0 0 0 0 0 104.337209302326 0 0 145.746124031008 0 0 0 chimp,human,macaque,marmoset,rabbit, antisense antisense A549@0.004111,AG04450@0.225407,BJ@0.0420735,GM12878@0.01553,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0.0202205,HUVEC@0.00921,K562@0.0094335,MCF7@0,NHEK@0.00483533,NHLF@1.51979,SKNSHRA@0.031307, 0 0 0 0 ENSG00000225655.1 ENST00000442069.1 chr9:72716-75298 3 572 2006 intergenic -0.26 1 0,0,0 0 0,0,0 0 0 0 0 107.353938185444 0 0 149.960119641077 0 0 0 chimp,human,macaque,marmoset,rabbit, antisense antisense A549@0.004111,AG04450@0.225407,BJ@0.0420735,GM12878@0.01553,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0.0202205,HUVEC@0.00921,K562@0.0094335,MCF7@0,NHEK@0.00483533,NHLF@1.51979,SKNSHRA@0.031307, 12 5 17 4 ENSG00000227917.1 ENST00000435421.1 chr9:100804-102850 2 610 1434 intergenic -6.03 0 0,0,0 0 0,0,0 0 0 21.328 0 5.5 0 0 5.96025104602511 0 0 0 chimp,human,macaque,marmoset,orangutan, lincRNA lincRNA A549@0.0103225,AG04450@0,BJ@0,GM12878@0,H1HESC@0.00507,HELAS3@0.022431,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0.184837,MCF7@0.006719,NHEK@0,NHLF@0,SKNSHRA@0, 45 3 0 0 ENSG00000227917.1 ENST00000427318.1 chr9:101002-102941 3 571 1364 intergenic 1.53 0 0,0,0 0 0,0,0 0 0 21.328 0 5.78225806451613 0 0 6.26612903225806 0 0 0 chimp,human,macaque,marmoset,orangutan, lincRNA lincRNA A549@0.0103225,AG04450@0,BJ@0,GM12878@0,H1HESC@0.00507,HELAS3@0.022431,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0.184837,MCF7@0.006719,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000231808.1 ENST00000416242.1 chr9:112716-113754 2 411 625 intergenic 0 0 0,0,0 0 0,0,0 0 0 0 0 0 0 0 0 0 0 0 chimp,horse,human,macaque,marmoset,orangutan,panda, lincRNA lincRNA A549@0.026752,AG04450@0,BJ@0,GM12878@0.0064295,H1HESC@0,HELAS3@0.0339545,HEPG2@0.0726515,HMEC@0,HSMM@0.0298925,HUVEC@0,K562@2.14444,MCF7@0,NHEK@0,NHLF@0.0141735,SKNSHRA@0.0065125, 179 2 116 2 ENSG00000235880.1 ENST00000429661.1 chr9:267966-273002 2 404 4630 intronic -5.36 0 0,1,0 0 0,0,0 113.806930693069 17.7200863930886 78.684 45.6138613861386 17.1069114470842 41.515 49.470297029703 15.4771058315335 56.497 0 0 cat,chimp,cow,dog,elephant,guinea_pig,horse,human,macaque,marmoset,orangutan,panda,pig,rabbit, antisense antisense A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0.0157435,HMEC@0,HSMM@0,HUVEC@0,K562@0.0067135,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000227155.1 ENST00000415004.1 chr9:454304-456358 2 459 1593 intronic -8.90 0 0,0,0 0 0,0,0 0 0 0 0 2.54237288135593 3.522 0 2.61770244821092 3.15 0 0 chimp,human,macaque,marmoset,orangutan, antisense antisense A549@0.009417,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0.009764,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000228115.1 ENST00000442442.1 chr9:487774-495610 2 401 7433 intronic -1.27 0 0,0,0 0 0,0,0 0 12.5553612269609 0 0 9.11623839634064 0 0 11.1738194537872 0 0 0 cat,chimp,cow,dog,guinea_pig,horse,human,macaque,marmoset,orangutan,panda,pig, sense_intronic sense_intronic A549@0.0110515,AG04450@0,BJ@0,GM12878@0.0108655,H1HESC@0.052071,HELAS3@0,HEPG2@0.041527,HMEC@0,HSMM@0,HUVEC@0,K562@0.006835,MCF7@0.0088395,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000226403.1 ENST00000441028.1 chr9:547317-549531 2 365 1847 intronic 2.93 0 0,0,1 0 0,0,0 0 0 140.108 2.71780821917808 0.537087168381159 54.218 0.665753424657534 0.657823497563617 59.795 0 0 chimp,human,macaque,marmoset,orangutan, sense_intronic sense_intronic A549@1.1652,AG04450@0,BJ@0.006572,GM12878@0.027889,H1HESC@0.345189,HELAS3@0.124482,HEPG2@0.0667425,HMEC@0.304192,HSMM@0,HUVEC@0.0061015,K562@0.023197,MCF7@0.0431285,NHEK@0.627866,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000226403.1 ENST00000444793.1 chr9:547318-549531 2 447 1764 intronic 2.93 0 0,0,1 0 0,0,0 0 0 140.108 2.21923937360179 0.562358276643991 54.218 0.543624161073825 0.688775510204082 59.795 0 0 chimp,cow,human,macaque,marmoset,orangutan, sense_intronic sense_intronic A549@1.1652,AG04450@0,BJ@0.006572,GM12878@0.027889,H1HESC@0.345189,HELAS3@0.124482,HEPG2@0.0667425,HMEC@0.304192,HSMM@0,HUVEC@0.0061015,K562@0.023197,MCF7@0.0431285,NHEK@0.627866,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000227914.1 ENST00000421645.1 chr9:673817-685555 3 778 10956 intronic 1.58 0 0,0,0 0 0,0,0 20.7917737789203 23.6394669587441 24.275 3.27763496143959 19.4058963125228 29.246 6.52956298200514 19.8559693318729 36.011 0 0 chimp,horse,human,macaque,marmoset,orangutan,pig,rabbit, antisense antisense A549@0,AG04450@0,BJ@0.0063045,GM12878@0,H1HESC@0,HELAS3@0.0320675,HEPG2@0.002728,HMEC@0,HSMM@0.005269,HUVEC@0,K562@0,MCF7@0.0051485,NHEK@0,NHLF@0.0024985,SKNSHRA@0, 0 0 0 0 ENSG00000231191.1 ENST00000453789.1 chr9:1041219-1042520 2 778 521 intergenic -0.08 0 0,1,0 0 0,0,0 0 0 0 0 0 39.234 0 0 47.321 0 0 chimp,horse,human,macaque,orangutan, antisense antisense A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000247223.1 ENST00000500181.1 chr9:1046079-1048630 2 1914 635 intergenic 2.73 0 0,1,0 0 0,0,0 9.7466039707419 0 16.12 5.99111807732497 7.22834645669291 35.235 20.2021943573668 7.60314960629921 34.136 1 1 chimp,human,macaque,marmoset,orangutan, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0.0056845,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0.014099,SKNSHRA@0, 0 0 0 0 ENSG00000236199.1 ENST00000426860.1 chr9:2041900-2046023 2 418 3703 intronic -1.09 0 0,1,1 0 0,0,0 138.648325358852 2.25762894950041 11.715 51.0143540669856 6.99081825546854 9.661 56.8325358851675 7.76613556575749 9.674 0 0 chimp,human,macaque,marmoset,orangutan, antisense antisense A549@0,AG04450@0.013014,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0.016643,K562@0.0063745,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000236404.2 ENST00000416826.1 chr9:2422702-2621413 11 3097 195594 intergenic 3.93 0 0,1,0 1 0,0,0 2.72586373910236 9.28476844892993 253.306 8.67742977074588 7.61881243800935 312.696 25.9473684210526 8.87362086771579 294.356 0 0 chimp,human,macaque,marmoset,orangutan, lincRNA processed_transcript A549@1.01363,AG04450@0.305146,BJ@0.8152,GM12878@0.077732,H1HESC@1.58012,HELAS3@0.0612845,HEPG2@0.103597,HMEC@0.05458,HSMM@0.0607835,HUVEC@0,K562@0.00767,MCF7@0.052056,NHEK@0.058809,NHLF@0.0969215,SKNSHRA@1.37409, 0 0 0 0 ENSG00000236404.2 ENST00000447278.1 chr9:2503280-2522019 3 420 18315 intergenic -3.25 0 0,0,0 0 0,0,0 0 5.13038493038493 8.14 0 2.93742833742834 5.456 1.15714285714286 3.23756483756484 7.888 0 0 chimp,human,macaque,marmoset,orangutan,pig, lincRNA processed_transcript A549@1.01363,AG04450@0.305146,BJ@0.8152,GM12878@0.077732,H1HESC@1.58012,HELAS3@0.0612845,HEPG2@0.103597,HMEC@0.05458,HSMM@0.0607835,HUVEC@0,K562@0.00767,MCF7@0.052056,NHEK@0.058809,NHLF@0.0969215,SKNSHRA@1.37409, 0 0 0 0 ENSG00000236404.2 ENST00000424605.1 chr9:2535652-2570754 4 742 34354 intergenic 0.47 1 0,0,1 0 0,0,0 0 3.41890318449089 39.375 0 3.51458345461955 62.627 3.044474393531 4.85407812772894 64.283 0 0 chimp,cow,horse,human,macaque,marmoset,orangutan,pig,rabbit, lincRNA processed_transcript A549@1.01363,AG04450@0.305146,BJ@0.8152,GM12878@0.077732,H1HESC@1.58012,HELAS3@0.0612845,HEPG2@0.103597,HMEC@0.05458,HSMM@0.0607835,HUVEC@0,K562@0.00767,MCF7@0.052056,NHEK@0.058809,NHLF@0.0969215,SKNSHRA@1.37409, 0 0 0 0 ENSG00000236404.2 ENST00000453601.1 chr9:2535652-2622373 4 883 85832 exonic 13.55 1 1,1,1 0 0,0,0 112.634201585504 11.5048466772299 0 135.08154020385 11.4707684779569 57.134 129.108720271801 12.7632468077174 58.826 0 0 cow,horse,human,macaque,orangutan,rabbit,rat, lincRNA processed_transcript A549@1.01363,AG04450@0.305146,BJ@0.8152,GM12878@0.077732,H1HESC@1.58012,HELAS3@0.0612845,HEPG2@0.103597,HMEC@0.05458,HSMM@0.0607835,HUVEC@0,K562@0.00767,MCF7@0.052056,NHEK@0.058809,NHLF@0.0969215,SKNSHRA@1.37409, 0 0 0 0 ENSG00000231052.1 ENST00000445631.1 chr9:2541097-2541635 2 204 332 intergenic -0.67 0 0,0,0 0 0,0,0 0 0 39.432 0 0 51.011 0 0 67.146 0 0 cat,chimp,cow,dog,elephant,guinea_pig,horse,human,macaque,marmoset,mouse,opossum,orangutan,panda,rabbit,rat, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000234656.2 ENST00000421272.2 chr9:2840592-2844073 2 933 2546 exonic -6.79 0 0,0,1 0 0,0,0 0 0 0 5.32154340836013 0 0 5.28938906752412 0 2.115 0 1 chimp,human,macaque,marmoset, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0.00568,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000236511.1 ENST00000452746.1 chr9:3181589-3198517 4 882 16040 intergenic 1.88 0 0,0,0 0 0,0,0 31.2244897959184 12.3888403990025 0 23.3061224489796 9.3465710723192 5.704 22.8514739229025 12.1459476309227 10.452 0 0 chimp,human,macaque,marmoset, lincRNA processed_transcript A549@0,AG04450@0,BJ@0.0100365,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000232104.1 ENST00000423112.1 chr9:3526723-3671624 6 525 144366 intergenic -6.89 0 0,1,0 0 0,0,0 0 15.2790130640178 195.84 0 14.102600335259 247.073 0 16.8809068617264 257.504 0 0 cat,chimp,cow,dog,guinea_pig,horse,human,macaque,marmoset,orangutan,pig,rabbit, lincRNA lincRNA A549@0.04207,AG04450@0.0390265,BJ@0.0825965,GM12878@3.26056,H1HESC@0.0487515,HELAS3@0.032942,HEPG2@0.0612295,HMEC@0,HSMM@0.03585,HUVEC@0,K562@0.258286,MCF7@0.0775,NHEK@0,NHLF@0.0313835,SKNSHRA@0.287, 0 0 0 0 ENSG00000237359.1 ENST00000430387.1 chr9:3647335-3648338 2 726 275 intergenic -5.81 0 0,0,0 0 0,0,0 249.82782369146 328.687272727273 487.954 236.028925619835 148.887272727273 272.488 263.192837465565 149.410909090909 307.927 0 0 cat,chimp,cow,dog,horse,human,macaque,marmoset,mouse,opossum,orangutan,panda,pig,platypus,rabbit,rat, lincRNA lincRNA A549@0.0088965,AG04450@0.0067275,BJ@0.0049145,GM12878@0.273035,H1HESC@0.0156065,HELAS3@0.0022295,HEPG2@0.0040245,HMEC@0,HSMM@0,HUVEC@0,K562@0.0755095,MCF7@0.008956,NHEK@0,NHLF@0,SKNSHRA@0.0989165, 0 0 0 0 ENSG00000232104.1 ENST00000457566.1 chr9:3668086-3671646 2 494 3064 intergenic -0.62 0 0,1,0 0 0,0,0 0 11.1243472584856 0 0 10.0972584856397 0 0 11.7872062663185 0 0 0 chimp,cow,dog,elephant,horse,human,macaque,marmoset,orangutan,panda,pig, lincRNA lincRNA A549@0.04207,AG04450@0.0390265,BJ@0.0825965,GM12878@3.26056,H1HESC@0.0487515,HELAS3@0.032942,HEPG2@0.0612295,HMEC@0,HSMM@0.03585,HUVEC@0,K562@0.258286,MCF7@0.0775,NHEK@0,NHLF@0.0313835,SKNSHRA@0.287, 0 0 0 0 ENSG00000235326.1 ENST00000427722.1 chr9:3674546-3691814 3 534 16730 intergenic -1.77 0 0,0,0 0 0,0,0 24.3595505617978 43.8441123729827 159.89 12.5299625468165 41.8653317393903 113.365 13.187265917603 42.174118350269 126.862 0 0 cat,human,marmoset,orangutan, lincRNA lincRNA A549@0.08135,AG04450@0,BJ@0.0707555,GM12878@5.38541,H1HESC@0.106194,HELAS3@0.080773,HEPG2@0.097219,HMEC@1.17531,HSMM@0.057888,HUVEC@0,K562@0.104941,MCF7@0.373717,NHEK@0,NHLF@0.018006,SKNSHRA@0.705999, 0 0 0 0 ENSG00000226669.1 ENST00000438147.1 chr9:3684076-3689626 2 674 4874 intergenic -8.10 0 0,0,0 0 0,0,0 0 40.2802626179729 13.2 0 32.9899466557243 0 0 34.2324579400903 0 0 0 human,macaque,marmoset,orangutan,panda, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0.0060875,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000236724.1 ENST00000422150.1 chr9:3875584-3878809 2 241 2982 intronic 0 0 0,0,0 0 0,0,0 54.8796680497925 10.4359490274983 63.941 78.8630705394191 10.6830985915493 94.802 79.4273858921162 8.16063044936284 111.007 0 0 chimp,human,macaque,marmoset,orangutan,rabbit, antisense antisense A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0.01685,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0.0114435, 0 0 0 0 ENSG00000237009.2 ENST00000451340.2 chr9:3898642-3901248 2 732 1872 exonic 3.03 1 0,0,1 0 0,0,0 20.818306010929 19.0950854700855 16.701 73.9426229508197 18.0299145299145 45.133 70.1311475409836 6.77991452991453 46.059 0 0 chimp,human,macaque,orangutan, antisense antisense A549@0.0091895,AG04450@0,BJ@0.006594,GM12878@0.01188,H1HESC@0,HELAS3@0.0371525,HEPG2@0,HMEC@0,HSMM@0.0168195,HUVEC@0,K562@0,MCF7@0.0056025,NHEK@0.00359733,NHLF@0,SKNSHRA@0.05026, 0 0 0 0 ENSG00000230001.1 ENST00000457383.1 chr9:4070906-4071884 2 633 343 intronic -5.34 0 0,0,0 0 0,0,0 0 0 23.947 29.4407582938389 0 99.379 51.8436018957346 0 93.682 0 0 cat,chimp,cow,dog,horse,human,macaque,marmoset,mouse,orangutan,pig,rabbit,rat, sense_intronic sense_intronic A549@0.205362,AG04450@0.184078,BJ@0.111872,GM12878@0.0098475,H1HESC@0,HELAS3@0.022288,HEPG2@0.0100675,HMEC@0,HSMM@0,HUVEC@0.0376285,K562@0,MCF7@0,NHEK@0.00897767,NHLF@0.0090745,SKNSHRA@0.0729585, 0 0 0 0 ENSG00000228322.1 ENST00000440674.1 chr9:4299390-4306046 2 871 5783 exonic 1.13 0 0,1,0 0 0,0,0 16.4810562571757 81.3980632889504 208.316 25.5430539609644 69.4615251599516 143.113 29.4397244546498 79.045305204911 140.895 0 0 cat,chimp,cow,guinea_pig,horse,human,macaque,marmoset,orangutan,panda,pig, lincRNA processed_transcript A549@0.0823125,AG04450@0.023573,BJ@0.0139565,GM12878@0,H1HESC@0,HELAS3@0.0155295,HEPG2@0.0590565,HMEC@0,HSMM@0,HUVEC@0.0122355,K562@0,MCF7@0,NHEK@0.00292467,NHLF@0.0155955,SKNSHRA@0.0078105, 0 0 0 0 ENSG00000231509.1 ENST00000443792.1 chr9:5584490-5588994 2 756 3746 intergenic -4.82 0 0,0,0 0 0,0,0 0 0 0 0 0.638013881473572 5.456 0 4.99492792311799 7.511 0 0 chimp,dog,human,macaque,marmoset,orangutan,pig, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0.0401275,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000225408.1 ENST00000426764.1 chr9:5719021-5720244 2 541 680 exonic 4.30 0 0,1,0 0 0,0,0 47.5563770794824 26.6029411764706 94.428 74.8835489833641 0.930882352941176 144.322 80.2070240295749 3.49852941176471 146.198 0 0 chimp,cow,dog,guinea_pig,horse,human,macaque,marmoset,orangutan,panda,pig,rabbit,rat, antisense antisense A549@0.007995,AG04450@0,BJ@0,GM12878@0.0505925,H1HESC@0,HELAS3@0.062021,HEPG2@0.0557635,HMEC@0,HSMM@0,HUVEC@0,K562@0.0180925,MCF7@0.119436,NHEK@0.00972533,NHLF@0,SKNSHRA@0.0353265, 0 0 0 0 ENSG00000228739.1 ENST00000437881.1 chr9:6047360-6066714 2 497 18855 intergenic 3.26 0 0,0,1 0 0,0,0 0 0 0 0 1.14097056483691 3.346 0 1.98557411827102 3.514 0 0 cat,chimp,horse,human,macaque,marmoset,orangutan,rabbit, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0.014092,H1HESC@0,HELAS3@0.008365,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000233367.1 ENST00000411561.1 chr9:6415145-6449558 2 636 33775 intronic -1.45 0 0,0,1 0 0,0,0 0 11.5906439674315 0 0 12.8436713545522 4.08 0 12.0574685418209 4.24 0 0 chimp,dog,horse,human,macaque,marmoset,orangutan,panda,rabbit, antisense antisense A549@0,AG04450@0,BJ@0,GM12878@0.0083245,H1HESC@0,HELAS3@0.0083195,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0.0041965,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0.0168635, 0 0 0 0 ENSG00000236924.1 ENST00000413145.1 chr9:6645956-6670635 3 523 24152 intergenic -0.91 0 1,1,1 1 0,0,0 42.2600382409178 10.7413878767804 92.338 129.562141491396 19.1045462073534 102.465 277.231357552581 71.3118996356409 122.678 0 0 chimp,cow,elephant,guinea_pig,human,macaque,marmoset,opossum,orangutan,platypus,rabbit, processed_transcript processed_transcript A549@4.1868,AG04450@0,BJ@0,GM12878@5.10309,H1HESC@2.02297,HELAS3@0.366571,HEPG2@1.01003,HMEC@0.054491,HSMM@0,HUVEC@0.0239405,K562@0,MCF7@0.566512,NHEK@0.00251,NHLF@0.0037095,SKNSHRA@0.166676, 0 0 0 0 ENSG00000229611.1 ENST00000412339.1 chr9:6704471-6707780 2 420 2887 intergenic 0 0 0,1,1 0 0,0,0 0 0 0 0 10.2293037755455 0 11.3547619047619 12.1087634222376 1.645 0 0 chimp,human, lincRNA lincRNA A549@0.084807,AG04450@0.028061,BJ@0,GM12878@0.14763,H1HESC@0.163473,HELAS3@0.0296735,HEPG2@0.0497615,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0.176019,NHEK@0,NHLF@0.0045725,SKNSHRA@0.108215, 0 0 0 0 ENSG00000225489.1 ENST00000443688.1 chr9:6718810-6719370 2 470 88 intergenic -3.37 0 0,0,0 0 0,0,0 0 0 0 0 0 0 4.6531914893617 0 0 0 0 chimp,human,macaque,orangutan, processed_transcript processed_transcript A549@0.131599,AG04450@0.0018295,BJ@0.020022,GM12878@7.96967,H1HESC@0.073578,HELAS3@0.135305,HEPG2@2.38926,HMEC@0.073349,HSMM@0.028216,HUVEC@0,K562@0,MCF7@0.890179,NHEK@0.510473,NHLF@0.0016655,SKNSHRA@0.831086, 0 0 0 0 ENSG00000236563.1 ENST00000457102.1 chr9:6780333-6785929 2 485 5109 intronic 0 0 0,0,1 0 0,0,0 0 0 0 0 0 0 0 0 0 0 0 human, sense_intronic sense_intronic A549@0,AG04450@0,BJ@0.0414355,GM12878@0.0373255,H1HESC@0.019063,HELAS3@0.0085035,HEPG2@0.009648,HMEC@0,HSMM@0,HUVEC@0.0582435,K562@0.0057255,MCF7@0,NHEK@0.00355867,NHLF@0,SKNSHRA@0.0347375, 0 0 0 0 ENSG00000224972.1 ENST00000445708.1 chr9:6902670-6978859 4 549 75634 intronic -22.44 0 0,0,0 0 0,0,0 0 3.81226696988127 0 40.4826958105647 9.05050638601687 0 71.4663023679417 14.7566438374276 18.574 0 0 cat,chimp,cow,dog,elephant,guinea_pig,horse,human,macaque,marmoset,orangutan,panda,rabbit, processed_transcript processed_transcript A549@0.0607555,AG04450@0.007334,BJ@0.029206,GM12878@0.0686605,H1HESC@0.0134365,HELAS3@0.011987,HEPG2@0.020209,HMEC@0,HSMM@0,HUVEC@0.0229535,K562@0.0100085,MCF7@0,NHEK@0.038949,NHLF@0,SKNSHRA@0.0465605, 0 0 0 0 ENSG00000226376.1 ENST00000413066.1 chr9:7930827-7935137 3 193 4113 intergenic -2.48 0 0,0,0 0 0,0,0 98.300518134715 20.224896669098 0 108.683937823834 33.8638463408704 4.063 70.5440414507772 40.6416241186482 1.59 0 0 chimp,elephant,guinea_pig,horse,human,marmoset,orangutan,rabbit, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000231902.1 ENST00000435444.1 chr9:7960413-7961080 2 499 166 intergenic 2.19 0 0,0,0 0 0,0,0 180.456913827655 101.710843373494 0 122.743486973948 95.1566265060241 6.695 103.935871743487 46.3253012048193 7.272 0 0 chimp,cow,dog,elephant,guinea_pig,horse,human,macaque,marmoset,orangutan,panda,pig, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000235389.1 ENST00000418571.1 chr9:8700595-8701552 2 483 472 intronic -6.24 0 0,0,0 0 0,0,0 9.18840579710145 0 0 0 0 0 7.71221532091097 0 0 0 0 cat,chimp,horse,human,macaque,orangutan, sense_intronic sense_intronic A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0.003175,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000225706.1 ENST00000447950.1 chr9:8858130-8862255 2 1666 2457 intronic -0.40 0 0,1,0 0 0,0,0 104.2424969988 80.7903947903948 67.991 122.294117647059 79.4916564916565 255.092 103.514405762305 66.8135938135938 231.838 0 0 chimp,cow,elephant,human,macaque,marmoset,orangutan,pig,rabbit, lincRNA processed_transcript A549@0.008306,AG04450@0.0013435,BJ@0.001451,GM12878@0,H1HESC@0.133197,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0.0014575,K562@0,MCF7@0,NHEK@0,NHLF@0.0185025,SKNSHRA@0.026181, 0 0 0 0 ENSG00000225706.1 ENST00000430766.1 chr9:8858134-8861724 2 1957 1631 intronic 2.37 0 0,1,1 0 0,0,0 87.7158916709249 121.705702023299 68.355 103.764435360245 118.620478234212 255.464 88.8911599386817 99.4831391784181 230.424 0 0 cat,chimp,elephant,guinea_pig,horse,human,macaque,marmoset,orangutan,panda,pig, lincRNA processed_transcript A549@0.008306,AG04450@0.0013435,BJ@0.001451,GM12878@0,H1HESC@0.133197,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0.0014575,K562@0,MCF7@0,NHEK@0,NHLF@0.0185025,SKNSHRA@0.026181, 0 0 0 0 ENSG00000234021.1 ENST00000419824.1 chr9:8936079-8963077 4 568 26424 intronic -3.17 0 0,0,0 0 0,0,0 0 27.821374508023 0 0 32.47725552528 17.42 0 33.1369588253103 19.165 0 0 cat,chimp,dog,horse,human,macaque,marmoset,orangutan,panda, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000230920.1 ENST00000449531.1 chr9:9799423-9803784 3 380 3977 intronic -8.09 0 0,0,0 0 0,0,0 0 0 0 0 3.57279356298718 0 0 5.84410359567513 0 0 0 chimp,cow,dog,elephant,horse,human,macaque,marmoset,orangutan,panda,pig, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000226717.1 ENST00000429581.1 chr9:10613202-10618218 3 633 4379 intergenic -2.63 0 0,1,0 0 0,0,0 0 30.3690340260333 23.762 7.38388625592417 61.3190226079013 169.549 2.88151658767773 60.5430463576159 165.807 0 0 chimp,human,macaque,marmoset,orangutan,pig, lincRNA processed_transcript A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0.0038905,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0.0588275,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000232035.1 ENST00000427161.1 chr9:10631750-10632203 2 155 296 intergenic -32.22 0 0,0,0 0 0,0,0 0 0 0 0 0 0 0 0 0 0 0 chimp,cow,human,marmoset,orangutan, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000230365.1 ENST00000437471.1 chr9:11275314-11276314 2 283 715 intergenic 1.08 0 0,0,1 0 0,0,0 0 0 0 0 0 0 0 0 0 0 0 NA lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000224935.1 ENST00000452685.1 chr9:12098660-12159147 4 557 59924 intergenic -4.37 0 0,1,1 0 0,0,0 0 0.749182297576931 0 7.76660682226212 2.33794472999132 0 7.93536804308797 5.35274681262933 0 0 0 chimp,elephant,horse,human,macaque,marmoset,orangutan, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000235448.1 ENST00000417638.1 chr9:12700100-12814344 4 795 113443 intronic -2.38 1 0,1,1 0 0,0,0 0 8.09651543065681 49.868 2.56603773584906 13.4184039561718 8.633 2.66666666666667 14.58644429361 20.648 0 0 cat,chimp,cow,dog,elephant,guinea_pig,horse,human,macaque,marmoset,orangutan,panda,pig,rabbit, processed_transcript processed_transcript A549@0.0096305,AG04450@0.0141685,BJ@0.0030815,GM12878@0,H1HESC@0.0037195,HELAS3@0.0200875,HEPG2@0.005333,HMEC@0.056372,HSMM@0.002853,HUVEC@0.0037245,K562@0,MCF7@0,NHEK@0.0541707,NHLF@0.009687,SKNSHRA@0.016305, 0 0 0 0 ENSG00000234740.1 ENST00000442428.1 chr9:13274509-13279186 3 454 4219 intronic -3.46 0 0,1,1 1 0,0,0 0 0 72.176 4.21145374449339 3.33278027968713 57.478 14.1211453744493 4.37022991230149 58.49 0 0 chimp,cow,elephant,horse,human,macaque,marmoset,mouse,orangutan,panda,rabbit,rat, sense_intronic sense_intronic A549@0.095619,AG04450@0.066262,BJ@0.0458795,GM12878@0,H1HESC@0.020737,HELAS3@0,HEPG2@0.0200695,HMEC@0,HSMM@0,HUVEC@0.070706,K562@0.008626,MCF7@0,NHEK@0.005698,NHLF@0.034259,SKNSHRA@0.118046, 0 0 0 0 ENSG00000226197.1 ENST00000428006.1 chr9:13446525-13487510 2 475 40508 intergenic -6.93 0 0,0,0 0 0,0,0 0 16.5484348770613 64.592 0 26.8310950923274 2.04 0 27.4960254764491 1.59 0 0 chimp,human,macaque,marmoset,orangutan, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0.004779,HUVEC@0.010195,K562@0,MCF7@0,NHEK@0,NHLF@0.0040905,SKNSHRA@0.0401985, 0 0 0 0 ENSG00000235533.1 ENST00000442260.1 chr9:14025970-14030114 3 433 3707 intergenic 0 0 0,0,0 0 0,0,0 66.9907621247113 42.451578095495 0 122.05311778291 43.8227677367143 0 167.427251732102 44.0612355004046 0 0 0 chimp,dog,guinea_pig,horse,human,macaque,marmoset,orangutan,panda,rabbit, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0.0122495,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000225472.1 ENST00000416996.1 chr9:14317084-14357853 2 962 39805 intronic -3.78 0 1,1,1 0 0,0,0 187.721413721414 70.2955156387388 380.768 115.798336798337 79.6311267428715 392.533 111.837837837838 76.6793116442658 374.986 0 0 chimp,cow,dog,elephant,guinea_pig,horse,human,macaque,marmoset,orangutan,panda,rabbit, antisense antisense A549@0.083706,AG04450@0,BJ@0,GM12878@0,H1HESC@0.0350665,HELAS3@0.0169715,HEPG2@0.0027435,HMEC@0.008495,HSMM@0,HUVEC@0.057037,K562@0.0058745,MCF7@0.0025355,NHEK@0.0131937,NHLF@0.020309,SKNSHRA@0.186937, 0 0 0 0 ENSG00000225472.1 ENST00000440947.1 chr9:14347319-14357907 2 791 9795 intronic -3.78 0 0,1,1 0 0,0,0 40.9633375474083 46.4566615620214 19.312 14.3957016434893 43.4533945890761 32.484 16.1630847029077 42.4838182746299 23.458 0 0 chimp,cow,dog,elephant,guinea_pig,horse,human,macaque,marmoset,orangutan,panda,rabbit, antisense antisense A549@0.083706,AG04450@0,BJ@0,GM12878@0,H1HESC@0.0350665,HELAS3@0.0169715,HEPG2@0.0027435,HMEC@0.008495,HSMM@0,HUVEC@0.057037,K562@0.0058745,MCF7@0.0025355,NHEK@0.0131937,NHLF@0.020309,SKNSHRA@0.186937, 0 0 0 0 ENSG00000224211.1 ENST00000443838.1 chr9:16121131-16122432 2 310 989 intergenic 3.64 0 0,0,0 0 0,0,0 32.4645161290323 15.7057633973711 49.442 56.4516129032258 57.948432760364 103.112 36.1129032258065 58.0394337714863 105.292 0 0 chimp,cow,dog,elephant,guinea_pig,horse,human,macaque,marmoset,orangutan,panda,pig,rabbit, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0.097672,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0.026738, 0 0 0 0 ENSG00000231756.1 ENST00000430640.1 chr9:16473186-16476235 2 412 2635 intronic -6.23 0 0,0,1 0 0,0,0 73.0485436893204 156.571537001898 0 71.6504854368932 170.26110056926 1.434 77.2742718446602 175.646299810247 1.506 0 0 chimp,elephant,guinea_pig,horse,human,macaque,orangutan,pig,rabbit, antisense antisense A549@0,AG04450@0,BJ@0,GM12878@0.905957,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000230694.1 ENST00000439447.1 chr9:16625674-16626388 2 453 259 intronic 3.14 0 0,0,0 0 0,0,0 0 135.011583011583 495.992 34.2626931567329 274.073359073359 546.36 72.0772626931567 351.532818532819 534.67 0 0 cat,chimp,cow,dog,elephant,guinea_pig,horse,human,macaque,marmoset,orangutan,panda,pig,rabbit,rat, antisense antisense A549@0,AG04450@0.005176,BJ@0.0142245,GM12878@0.030577,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000234779.1 ENST00000450445.1 chr9:16726812-16727522 3 425 281 intronic 3.97 1 1,1,1 1 0,0,0 4.36470588235294 0 141.576 270.818823529412 62.1850533807829 265.229 292.084705882353 159.722419928826 244.629 0 0 cat,chimp,dog,elephant,human,macaque,marmoset,mouse,orangutan,panda,rabbit,rat, antisense antisense A549@0.575617,AG04450@0.31325,BJ@0.515894,GM12878@0.054837,H1HESC@2.77119,HELAS3@0.338107,HEPG2@0,HMEC@0,HSMM@0.34421,HUVEC@0.687717,K562@0,MCF7@0,NHEK@0.052003,NHLF@0.408323,SKNSHRA@0.334296, 0 0 0 0 ENSG00000237153.1 ENST00000430545.1 chr9:17048917-17112813 2 664 63230 intergenic 2.34 0 0,0,0 0 0,0,0 0 17.8335916495334 0 0 23.9851652696505 0 0 24.7700458643049 0 0 0 cat,chimp,dog,horse,human,macaque,marmoset,orangutan,panda,pig,rabbit, processed_transcript processed_transcript A549@0,AG04450@0,BJ@0,GM12878@0.506052,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0.002897,SKNSHRA@0, 0 0 0 0 ENSG00000227167.1 ENST00000443359.1 chr9:18360595-18362218 2 235 1386 intergenic -3.13 0 0,0,1 0 0,0,0 0 148.542568542569 73.73 6.33191489361702 237.526695526696 131.751 0 196.4329004329 138.451 0 0 chimp,human,macaque,marmoset,orangutan,pig, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000232978.1 ENST00000417577.1 chr9:19291335-19292577 2 410 830 intronic 0 0 0,0,0 0 0,0,0 0 0 0 0 13.0903614457831 5.1 0 13.4469879518072 7.62 0 0 chimp,human,macaque,marmoset,orangutan, antisense antisense A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0.022691,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000227071.1 ENST00000439876.1 chr9:20683303-20684687 2 357 1025 intronic 2.37 0 1,1,1 0 0,0,0 0 29.2390243902439 89.061 18.4285714285714 55.8 50.293 18.2380952380952 57.4692682926829 54.282 0 0 chimp,cow,guinea_pig,horse,human,macaque,marmoset,orangutan,panda,pig,rabbit, lincRNA lincRNA A549@0.0120925,AG04450@0.0193635,BJ@0,GM12878@0.026117,H1HESC@0,HELAS3@0.0065105,HEPG2@0,HMEC@0.011406,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000227071.1 ENST00000445051.1 chr9:20683388-20683937 2 215 332 intronic 2.80 0 0,0,1 0 0,0,0 0 0 54.274 16.5674418604651 0 80.438 16.7348837209302 8.05120481927711 79.583 0 0 chimp,cow,horse,human,macaque,marmoset,orangutan,panda,rabbit, lincRNA lincRNA A549@0.0120925,AG04450@0.0193635,BJ@0,GM12878@0.026117,H1HESC@0,HELAS3@0.0065105,HEPG2@0,HMEC@0.011406,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000171889.3 ENST00000304425.3 chr9:21455641-21559668 4 741 103280 encompassing -2.25 0 0,1,1 1 0,0,0 0 4.93466305189775 6.16 5.15519568151147 9.6533210689388 26.144 20.5330634278003 10.8254550735864 26.137 0 0 chimp,cow,dog,horse,human,macaque,mouse,orangutan,pig,rat, lincRNA processed_transcript A549@3.05401,AG04450@1.31493,BJ@2.9454,GM12878@0.002706,H1HESC@0.105311,HELAS3@1.13097,HEPG2@0.427998,HMEC@1.97632,HSMM@0.372279,HUVEC@0.393618,K562@0,MCF7@0,NHEK@3.73536,NHLF@1.80222,SKNSHRA@0.0277945, 0 0 0 0 ENSG00000233326.1 ENST00000427788.1 chr9:21803282-21813885 3 411 10188 intronic 6.56 0 0,1,0 1 0,0,0 0 0 38.318 9.32116788321168 2.80545740086376 26.012 9.39416058394161 65.1855123674912 30.745 0 0 chimp,horse,human,macaque,marmoset,orangutan, sense_intronic sense_intronic A549@0.0987115,AG04450@0.0121545,BJ@0,GM12878@0.032584,H1HESC@0,HELAS3@0.017656,HEPG2@0.0118865,HMEC@0.037559,HSMM@0,HUVEC@0,K562@0,MCF7@0.0240425,NHEK@0.00648167,NHLF@0,SKNSHRA@0.022512, 0 0 0 0 ENSG00000240498.1 ENST00000428597.1 chr9:21994790-22121094 19 3816 122452 encompassing 6.43 1 0,1,1 1 0,0,0 7.45047169811321 12.6120602358475 106.649 5.09722222222222 15.9796083363277 88.068 11.6970649895178 20.7193104236762 72.771 1 1 chimp,human,macaque,marmoset,orangutan, processed_transcript antisense A549@0,AG04450@0.35587,BJ@0.188262,GM12878@1.11959,H1HESC@0.003612,HELAS3@1.10237,HEPG2@0.246716,HMEC@0.343078,HSMM@0.14987,HUVEC@0.160793,K562@0,MCF7@1.36158,NHEK@0.133719,NHLF@0.241259,SKNSHRA@0.157776, 0 0 0 0 ENSG00000240498.1 ENST00000421632.1 chr9:22046750-22118701 6 672 71269 intergenic -1.43 0 0,0,0 0 0,0,0 0 13.8308661549902 0 0 16.9432291739747 7.38 0 18.0432025144172 12.532 0 0 cat,chimp,guinea_pig,human,macaque,marmoset,orangutan, processed_transcript processed_transcript A549@0,AG04450@0.35587,BJ@0.188262,GM12878@1.11959,H1HESC@0.003612,HELAS3@1.10237,HEPG2@0.246716,HMEC@0.343078,HSMM@0.14987,HUVEC@0.160793,K562@0,MCF7@1.36158,NHEK@0.133719,NHLF@0.241259,SKNSHRA@0.157776, 0 0 0 0 ENSG00000240498.1 ENST00000455933.1 chr9:22049184-22077890 3 390 28312 intergenic -9.47 1 0,0,0 0 0,0,0 0 10.5583851370444 0 0 13.9996821135914 0 0 15.1876236224922 1.757 0 0 chimp,cow,human,macaque,marmoset,orangutan, processed_transcript processed_transcript A549@0,AG04450@0.35587,BJ@0.188262,GM12878@1.11959,H1HESC@0.003612,HELAS3@1.10237,HEPG2@0.246716,HMEC@0.343078,HSMM@0.14987,HUVEC@0.160793,K562@0,MCF7@1.36158,NHEK@0.133719,NHLF@0.241259,SKNSHRA@0.157776, 0 0 0 0 ENSG00000240498.1 ENST00000422420.1 chr9:22113677-22121096 3 924 6491 intergenic -1.04 1 0,0,1 0 0,0,0 0 7.29132645201048 0 0 13.0023108920043 0 0 15.1327992605146 4.374 0 0 chimp,elephant,horse,human,macaque,marmoset,orangutan, processed_transcript processed_transcript A549@0,AG04450@0.35587,BJ@0.188262,GM12878@1.11959,H1HESC@0.003612,HELAS3@1.10237,HEPG2@0.246716,HMEC@0.343078,HSMM@0.14987,HUVEC@0.160793,K562@0,MCF7@1.36158,NHEK@0.133719,NHLF@0.241259,SKNSHRA@0.157776, 0 0 0 0 ENSG00000236921.1 ENST00000435092.1 chr9:22203989-22214671 4 439 10237 intergenic 7.32 0 0,0,0 0 0,0,0 39.6082004555809 24.4619517436749 7.82 22.1093394077449 31.0322360066426 46.002 21.9521640091116 31.0136758816059 50.766 0 0 cat,chimp,cow,elephant,horse,human,macaque,marmoset,orangutan, lincRNA lincRNA A549@0,AG04450@0.047375,BJ@0,GM12878@0,H1HESC@0,HELAS3@0.0225335,HEPG2@0,HMEC@0,HSMM@0.019581,HUVEC@0,K562@0,MCF7@0.197207,NHEK@0.0247193,NHLF@0,SKNSHRA@0.010261, 0 0 0 0 ENSG00000234840.1 ENST00000436786.1 chr9:22646199-22824212 6 2341 175662 intergenic 31.76 0 0,1,0 0 0,0,0 0 12.0331830447109 114.81 1.34429730884238 19.8021029021644 205.151 1.43143955574541 25.2161992918218 200.809 0 0 human,macaque,orangutan, processed_transcript processed_transcript A549@0.218181,AG04450@0.0522495,BJ@0.024005,GM12878@0.218518,H1HESC@0.018899,HELAS3@0.0207075,HEPG2@0.0733645,HMEC@0.020826,HSMM@0.0209325,HUVEC@0.030887,K562@0,MCF7@1.18594,NHEK@0.299864,NHLF@0.087039,SKNSHRA@0.217511, 0 0 0 0 ENSG00000234840.1 ENST00000433645.1 chr9:22682469-22687626 2 323 4832 intergenic -14.03 0 0,0,0 0 0,0,0 0 86.1314155629139 0 2.21981424148607 115.678600993377 0 2.46130030959752 122.876862582781 0 0 0 cat,chimp,cow,dog,elephant,guinea_pig,horse,human,macaque,marmoset,orangutan,panda,rabbit, processed_transcript processed_transcript A549@0.218181,AG04450@0.0522495,BJ@0.024005,GM12878@0.218518,H1HESC@0.018899,HELAS3@0.0207075,HEPG2@0.0733645,HMEC@0.020826,HSMM@0.0209325,HUVEC@0.030887,K562@0,MCF7@1.18594,NHEK@0.299864,NHLF@0.087039,SKNSHRA@0.217511, 0 0 0 0 ENSG00000224549.1 ENST00000448570.1 chr9:22767174-22768315 2 445 694 intergenic -4.17 0 0,0,0 0 0,0,0 0 0 0 0 0 0 0 0 5.589 0 0 chimp,human,macaque,marmoset,orangutan, lincRNA lincRNA A549@0.108239,AG04450@0.03473,BJ@0,GM12878@0.198585,H1HESC@0,HELAS3@0,HEPG2@0.004261,HMEC@0.006116,HSMM@0,HUVEC@0.0173935,K562@0,MCF7@0.168076,NHEK@0.179023,NHLF@0.020848,SKNSHRA@0.0622655, 0 0 0 0 ENSG00000233906.1 ENST00000440888.1 chr9:23671786-23672397 2 235 374 intergenic 0 0 0,0,0 0 0,0,0 18.0851063829787 0 95.625 101.710638297872 9.97326203208556 101.521 102.8 33.3395721925134 101.25 0 0 cat,chimp,cow,dog,guinea_pig,horse,human,macaque,marmoset,orangutan,panda,pig, lincRNA processed_transcript A549@0,AG04450@0,BJ@0,GM12878@0.127453,H1HESC@0.147335,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0.02466,NHLF@0,SKNSHRA@0.201437, 0 0 0 0 ENSG00000230810.1 ENST00000457037.1 chr9:23693628-23721789 4 1302 26853 intronic -0.85 0 0,0,0 0 0,0,0 28.3870967741935 35.7646073064462 463.025 2.65284178187404 39.215320448367 382.611 12.9731182795699 41.9230998398689 373.631 0 0 chimp,elephant,human,macaque,marmoset,orangutan,panda,pig, antisense antisense A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000231460.1 ENST00000423440.1 chr9:23829671-23849912 5 1422 18811 intergenic 0.93 0 0,0,0 0 0,0,0 121.121659634318 83.5403221519324 15.624 152.853727144866 98.523045026846 2.904 146.987341772152 90.8303120514593 9.368 0 0 chimp,cow,dog,elephant,horse,human,macaque,marmoset,orangutan,panda,rabbit, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0.0020495,H1HESC@0.0282865,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0.0075205,HUVEC@0,K562@0,MCF7@0,NHEK@0.014558,NHLF@0,SKNSHRA@0.0173455, 0 0 0 0 ENSG00000237414.1 ENST00000446754.1 chr9:23894988-23898054 2 687 2377 intergenic 0.25 0 0,0,0 0 0,0,0 0 78.9625578460244 0 0 160.576356752209 0 0 190.542280185107 0 0 0 NA lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0.006804,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 129 2 0 0 ENSG00000236306.1 ENST00000423326.1 chr9:25780054-25784560 3 460 4042 intergenic -0.73 0 0,0,0 0 0,0,0 169.75652173913 6.83275606135576 84.527 248.282608695652 29.1922315685304 73.54 261.652173913043 35.3869371598219 47.224 0 0 cat,chimp,dog,guinea_pig,horse,human,marmoset,mouse,orangutan,panda,pig,rabbit,rat, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000254261.1 ENST00000523363.1 chr9:26746951-26786872 4 439 39476 intergenic -4.32 0 0,0,0 0 0,0,0 0 30.0479531867464 0 0 34.5358698956328 4.843 0 35.0016212382207 5.124 1 1 chimp,human,macaque,marmoset,orangutan, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0.0421085,H1HESC@0.524813,HELAS3@0.0942235,HEPG2@0.024251,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000253400.1 ENST00000521572.1 chr9:26801731-26805860 2 369 3758 intergenic 0 0 0,1,0 0 0,0,0 61.2439024390244 6.73230441724321 340.846 119.479674796748 2.13517828632251 421.733 94.8617886178862 2.21820117083555 430.943 0 0 cat,chimp,cow,dog,elephant,guinea_pig,horse,human,macaque,marmoset,orangutan,panda,pig,rabbit, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0.149445,HELAS3@0,HEPG2@0.0467945,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000234676.1 ENST00000456198.1 chr9:26955778-26956293 2 403 110 intronic -0.71 0 1,1,1 0 0,0,0 0 0 0 0 0 9.25 0 0 9.238 0 0 cat,chimp,horse,human,macaque,marmoset,orangutan,rabbit, antisense antisense A549@0.150243,AG04450@0.0544285,BJ@0.072117,GM12878@0.185895,H1HESC@0.415502,HELAS3@0.109277,HEPG2@0.105851,HMEC@0.040441,HSMM@0.0361115,HUVEC@0.013187,K562@0.237822,MCF7@0.020307,NHEK@0.0384703,NHLF@0.033457,SKNSHRA@0.0697915, 0 0 0 0 ENSG00000254396.1 ENST00000522960.1 chr9:27102628-27104726 2 562 1534 intergenic 4.68 1 0,0,1 0 0,0,0 0 9.70013037809648 0 14.5943060498221 17.5847457627119 0 15.3113879003559 17.5847457627119 0 0 0 chimp,dog,horse,human,macaque,rat, lincRNA lincRNA A549@0.0251895,AG04450@0.0151415,BJ@0,GM12878@0.016624,H1HESC@0,HELAS3@0.053596,HEPG2@0,HMEC@0,HSMM@0.0611265,HUVEC@0,K562@0.0297695,MCF7@0,NHEK@0.0190537,NHLF@0.0136845,SKNSHRA@0.016105, 0 0 0 0 ENSG00000231459.1 ENST00000425633.1 chr9:27245682-27282791 17 2896 34181 intergenic 2.37 0 0,1,0 0 0,0,0 6.67127071823204 0.356630876802902 0 20.1912983425414 2.37684678622627 0 61.9523480662983 5.092507533425 0 0 0 chimp,human,macaque,orangutan,rabbit, lincRNA non_coding A549@0.0018965,AG04450@0,BJ@0,GM12878@0.018107,H1HESC@0.19011,HELAS3@0.054183,HEPG2@0.014046,HMEC@0.002811,HSMM@0,HUVEC@0,K562@0.246822,MCF7@0.000706,NHEK@0.010087,NHLF@0,SKNSHRA@0.007163, 0 0 0 0 ENSG00000237734.1 ENST00000448858.1 chr9:27391732-27397561 4 704 5119 intronic -2.41 0 0,0,0 0 0,0,0 57.9460227272727 24.727681187732 0 21 26.5903496776714 5.454 2.25852272727273 28.7968353193983 24.133 0 0 chimp,cow,dog,elephant,horse,human,macaque,marmoset,orangutan,pig,rabbit, antisense antisense A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0.012332,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000235453.3 ENST00000453396.1 chr9:32551142-32553002 3 997 859 exonic 6.90 1 0,1,1 0 0,0,0 14.6038114343029 31.3480791618161 57.855 51.0882647943832 24.3108265424913 93.496 38.7753259779338 23.2840512223516 92.967 0 0 cat,chimp,cow,dog,elephant,horse,human,macaque,marmoset,orangutan,panda,pig, processed_transcript processed_transcript A549@1.43583,AG04450@1.3649,BJ@1.3074,GM12878@3.58974,H1HESC@1.33988,HELAS3@1.40545,HEPG2@2.5036,HMEC@0.607895,HSMM@1.2354,HUVEC@1.16187,K562@1.21925,MCF7@1.06484,NHEK@1.53573,NHLF@1.14109,SKNSHRA@3.13358, 0 0 0 0 ENSG00000235453.3 ENST00000450093.1 chr9:32551771-32552996 3 476 745 exonic 8.94 1 1,1,1 0 0,0,0 30.5882352941176 36.144966442953 57.855 105.817226890756 28.0308724832215 77.166 80.0231092436975 26.8469798657718 76.787 0 0 cat,chimp,cow,dog,elephant,guinea_pig,human,macaque,marmoset,orangutan,panda,pig,rabbit, processed_transcript processed_transcript A549@1.43583,AG04450@1.3649,BJ@1.3074,GM12878@3.58974,H1HESC@1.33988,HELAS3@1.40545,HEPG2@2.5036,HMEC@0.607895,HSMM@1.2354,HUVEC@1.16187,K562@1.21925,MCF7@1.06484,NHEK@1.53573,NHLF@1.14109,SKNSHRA@3.13358, 0 0 0 0 ENSG00000235453.3 ENST00000540066.1 chr9:32552344-32553005 1 661 0 exonic 2.06 1 1,1,1 1 0,0,0 62.7655068078669 0 0 400.304084720121 0 11.254 378.698940998487 0 6.396 0 0 cat,chimp,cow,dog,elephant,horse,human,macaque,marmoset,mouse,orangutan,panda,pig,rat, processed_transcript processed_transcript A549@1.43583,AG04450@1.3649,BJ@1.3074,GM12878@3.58974,H1HESC@1.33988,HELAS3@1.40545,HEPG2@2.5036,HMEC@0.607895,HSMM@1.2354,HUVEC@1.16187,K562@1.21925,MCF7@1.06484,NHEK@1.53573,NHLF@1.14109,SKNSHRA@3.13358, 0 0 0 0 ENSG00000223440.1 ENST00000430787.1 chr9:32633452-32648683 2 2580 12649 exonic 1.16 0 0,0,0 0 0,0,0 57.9627906976744 7.21290220570796 558 402.782170542636 26.9466360977152 742 510.808914728682 38.0151790655388 930 0 0 chimp,human,macaque,orangutan, antisense antisense A549@0.0021395,AG04450@0.0024975,BJ@0,GM12878@0,H1HESC@0,HELAS3@0.012933,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0.0042225,MCF7@0.0015925,NHEK@0.000988667,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000230516.1 ENST00000413291.1 chr9:32643101-32645024 2 837 1084 intergenic 0.96 0 0,0,0 0 0,0,0 71.5436081242533 0 13.265 63.2043010752688 1.14391143911439 50.399 68.8673835125448 1.15774907749077 50.702 0 0 cat,chimp,cow,dog,elephant,guinea_pig,horse,human,macaque,marmoset,mouse,opossum,orangutan,rabbit, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0.003165,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000231193.1 ENST00000424177.1 chr9:32840596-32841760 2 549 613 intergenic 0.76 0 0,1,0 0 0,0,0 22.6375227686703 0 11.22 3.91803278688525 50.1402936378467 41.941 4.24590163934426 53.7030995106036 64.608 0 0 cat,chimp,cow,dog,guinea_pig,horse,human,macaque,marmoset,orangutan,panda,pig, processed_transcript processed_transcript A549@0.0189785,AG04450@0,BJ@0,GM12878@0.0036585,H1HESC@0.0053935,HELAS3@0.0075755,HEPG2@0.0039485,HMEC@0,HSMM@0,HUVEC@0.005401,K562@0.018791,MCF7@0.0148435,NHEK@0,NHLF@0,SKNSHRA@0.0696525, 0 0 0 0 ENSG00000233554.1 ENST00000426270.1 chr9:33166973-33179708 3 505 12226 exonic 1.09 0 0,1,0 0 0,0,0 52.3009900990099 8.95534107639457 25.527 53.019801980198 13.0516113201374 24.638 58.6851485148515 14.4163258629151 23.476 0 0 chimp,cow,elephant,human,macaque,marmoset,orangutan,rat, antisense antisense A549@0.17289,AG04450@0.353784,BJ@0.368194,GM12878@0.254637,H1HESC@0.0355005,HELAS3@1.27489,HEPG2@0.192654,HMEC@0.306892,HSMM@0.344738,HUVEC@0.27349,K562@0.034947,MCF7@0.1819,NHEK@0.446851,NHLF@0.488233,SKNSHRA@0.143334, 0 0 0 0 ENSG00000233554.1 ENST00000442432.1 chr9:33166973-33179981 4 839 12163 exonic -2.25 0 1,1,1 0 0,0,0 31.4803337306317 9.00172654772671 25.527 31.9129916567342 13.1192140097016 24.638 35.3230035756853 14.4909972868536 23.476 0 0 chimp,human,macaque,marmoset,orangutan, antisense antisense A549@0.17289,AG04450@0.353784,BJ@0.368194,GM12878@0.254637,H1HESC@0.0355005,HELAS3@1.27489,HEPG2@0.192654,HMEC@0.306892,HSMM@0.344738,HUVEC@0.27349,K562@0.034947,MCF7@0.1819,NHEK@0.446851,NHLF@0.488233,SKNSHRA@0.143334, 0 0 0 0 ENSG00000223678.1 ENST00000450864.1 chr9:33402855-33409946 3 350 6737 intergenic 0 0 0,1,0 0 0,0,0 0 0 0 0 13.2014249666023 22.153 0 14.7190143981 22.358 0 0 chimp,horse,human,macaque,marmoset,orangutan, antisense antisense A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0.0065775,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000228678.1 ENST00000421855.1 chr9:33500946-33502751 2 419 1384 intergenic -3.38 0 0,0,0 0 0,0,0 0 0 0 0 0 0 0 0 0 0 0 chimp,horse,human,macaque,marmoset,orangutan, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000228072.1 ENST00000420315.1 chr9:33512957-33514771 3 392 1418 intergenic -3.35 1 0,0,0 0 0,0,0 0 0 0 0 0 0 0 0 0 0 0 chimp,elephant,horse,human,macaque,marmoset,orangutan, antisense antisense A549@0.0078585,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0.0400425,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0.005205,NHEK@0.00334233,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000226562.1 ENST00000433357.1 chr9:33602499-33605291 5 897 1887 intergenic 10.61 1 0,0,0 0 0,0,0 0 0 0 0 0 0 0 0 0 0 0 chimp,horse,human,macaque,marmoset,orangutan, lincRNA lincRNA A549@0.643747,AG04450@0.238444,BJ@0.002683,GM12878@0,H1HESC@0.331587,HELAS3@0.609125,HEPG2@0.299602,HMEC@0.009079,HSMM@0.037847,HUVEC@0.139589,K562@0.035543,MCF7@0.351564,NHEK@0.216976,NHLF@0,SKNSHRA@0.053786, 0 0 0 0 ENSG00000226562.1 ENST00000432139.1 chr9:33604295-33605279 2 543 439 intergenic 3.41 1 0,0,0 0 0,0,0 0 0 0 0 0 0 0 0 0 0 0 chimp,human,marmoset,orangutan, lincRNA lincRNA A549@0.643747,AG04450@0.238444,BJ@0.002683,GM12878@0,H1HESC@0.331587,HELAS3@0.609125,HEPG2@0.299602,HMEC@0.009079,HSMM@0.037847,HUVEC@0.139589,K562@0.035543,MCF7@0.351564,NHEK@0.216976,NHLF@0,SKNSHRA@0.053786, 0 0 0 0 ENSG00000227301.1 ENST00000449144.1 chr9:33719688-33722553 2 1142 1721 intergenic -0.08 0 0,0,0 0 0,0,0 0 0 0 0 0 0 0 0 0 0 0 chimp,human,macaque,marmoset,orangutan, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0.00464,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0.0516075, 0 0 0 0 ENSG00000233776.1 ENST00000422764.1 chr9:33732973-33738414 2 397 5042 intergenic 1.02 1 0,0,1 0 0,0,0 0 0 0 0 0 0 0 0 0 0 0 chimp,dog,elephant,horse,human,macaque,marmoset,orangutan, antisense antisense A549@0.0138455,AG04450@0.006635,BJ@0.0066585,GM12878@0.055804,H1HESC@0.0128055,HELAS3@0.033024,HEPG2@0.016838,HMEC@0,HSMM@0,HUVEC@0.0122175,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0.04637, 0 0 0 0 ENSG00000233776.1 ENST00000444956.1 chr9:33732973-33738414 2 484 4955 intergenic 2.90 1 0,0,1 0 0,0,0 0 0 0 0 0 0 0 0 0 0 0 chimp,dog,elephant,horse,human,macaque,marmoset,orangutan,panda, antisense antisense A549@0.0138455,AG04450@0.006635,BJ@0.0066585,GM12878@0.055804,H1HESC@0.0128055,HELAS3@0.033024,HEPG2@0.016838,HMEC@0,HSMM@0,HUVEC@0.0122175,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0.04637, 0 0 0 0 ENSG00000235481.1 ENST00000454429.1 chr9:33785948-33799911 3 475 13484 exonic 3.55 0 0,1,0 0 0,0,0 0 0 0 13.1263157894737 13.3854197567487 0 36.5242105263158 25.3660634826461 0 0 0 chimp,human,macaque,marmoset,mouse,orangutan,pig, antisense antisense A549@0.140754,AG04450@0.087158,BJ@0.183139,GM12878@0.167934,H1HESC@0.0490795,HELAS3@0.134206,HEPG2@0.068479,HMEC@0,HSMM@0.018147,HUVEC@0.127281,K562@0,MCF7@0.101434,NHEK@0,NHLF@0.0161465,SKNSHRA@0.198485, 0 0 0 0 ENSG00000230925.1 ENST00000414426.1 chr9:33909913-33911120 2 480 725 intronic 0 0 0,0,0 0 0,0,0 0 0 99.684 18.08125 0 93.148 43.8166666666667 0 103.806 0 0 chimp,human,macaque,orangutan, antisense antisense A549@0.006997,AG04450@0,BJ@0,GM12878@0,H1HESC@0.006038,HELAS3@0.018854,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0.0111095,MCF7@0.0722195,NHEK@0.00404167,NHLF@0,SKNSHRA@0.0197265, 0 0 0 0 ENSG00000235983.1 ENST00000425532.1 chr9:33983643-33984662 2 476 541 intronic -6.45 0 0,0,0 0 0,0,0 0 0 0 0 0 0 0 0 0 0 0 chimp,human,marmoset,orangutan, antisense antisense A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0.005627, 0 0 0 0 ENSG00000228352.1 ENST00000448245.1 chr9:34084330-34096223 3 632 11257 intronic -5.72 0 0,0,0 0 0,0,0 0 65.5924313760327 0 0 73.3249533623523 48.341 0 73.9483876698943 53.38 0 0 cat,chimp,cow,horse,human,macaque,marmoset,orangutan,pig,rabbit, antisense antisense A549@0.00435,AG04450@0,BJ@0,GM12878@0.0031745,H1HESC@0,HELAS3@0,HEPG2@0.0068525,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0.003166,NHEK@0.00249967,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000228352.1 ENST00000426058.1 chr9:34089641-34096676 2 525 6508 intronic 0 0 0,0,0 0 0,0,0 0 14.7842655193608 91.448 4.85714285714286 19.0603872157345 124.667 5.04761904761905 21.3902888752305 108.217 0 0 cat,chimp,cow,dog,elephant,horse,human,macaque,marmoset,orangutan,panda,pig,rabbit, antisense antisense A549@0.00435,AG04450@0,BJ@0,GM12878@0.0031745,H1HESC@0,HELAS3@0,HEPG2@0.0068525,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0.003166,NHEK@0.00249967,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000230729.1 ENST00000439960.1 chr9:34521525-34524239 3 628 2082 exonic 18.19 0 0,0,0 0 0,0,0 204.437898089172 51.4409221902017 183.515 269.095541401274 110.535542747358 230.127 213.165605095541 92.1527377521614 205.793 0 0 cat,chimp,cow,dog,elephant,guinea_pig,horse,human,macaque,marmoset,mouse,orangutan,panda,pig,rabbit,rat, antisense antisense A549@0,AG04450@0,BJ@0.0113405,GM12878@0,H1HESC@0.119011,HELAS3@0.012618,HEPG2@0,HMEC@0.006489,HSMM@0,HUVEC@0,K562@0,MCF7@0.006517,NHEK@0,NHLF@0,SKNSHRA@0.0605425, 0 0 0 0 ENSG00000237159.1 ENST00000436360.1 chr9:34568013-34582647 5 887 13739 intronic 0.74 0 0,0,0 0 0,0,0 48.3923337091319 83.5404323458767 177.552 18.95603156708 119.815270398137 176.312 17.9706877113867 115.468447485261 176.553 0 0 cat,chimp,cow,dog,elephant,horse,human,macaque,marmoset,mouse,orangutan,panda,pig,rabbit,rat, antisense antisense A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000237159.1 ENST00000453642.1 chr9:34568013-34582807 3 720 14070 intronic 0.66 0 0,0,0 0 0,0,0 48.2222222222222 82.4578535891969 177.552 2.06666666666667 118.122174840085 176.312 2.09166666666667 113.814712153518 176.553 0 0 cat,chimp,cow,dog,elephant,horse,human,macaque,marmoset,mouse,orangutan,panda,pig,rabbit,rat, antisense antisense A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000237159.1 ENST00000438244.1 chr9:34568013-34582827 2 636 14176 intronic 0.66 0 0,0,0 0 0,0,0 54.5911949685535 81.8412810383747 177.552 2.33962264150943 117.238924943567 176.312 2.36792452830189 112.963670993228 176.553 0 0 cat,chimp,dog,elephant,horse,human,macaque,marmoset,mouse,opossum,orangutan,panda,pig,rabbit,rat, antisense antisense A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000237159.1 ENST00000454187.1 chr9:34569589-34570123 2 264 268 intronic 0 0 0,1,0 0 0,0,0 0 0 109.097 0 10.4664179104478 163.766 0 10.8768656716418 161.252 0 0 chimp,human,macaque,marmoset,orangutan, antisense antisense A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000187186.9 ENST00000421828.1 chr9:34664780-34665976 3 832 360 intergenic 23.77 0 0,1,1 1 0,0,0 87.4579326923077 36.4444444444444 42.497 208.549278846154 172.855555555556 63.708 198.376201923077 107.277777777778 63.979 0 0 cat,chimp,cow,dog,elephant,guinea_pig,horse,human,macaque,marmoset,mouse,orangutan,panda,pig,rabbit,rat, antisense antisense A549@0.588377,AG04450@0.285822,BJ@0.291434,GM12878@0.339602,H1HESC@1.26424,HELAS3@0.361475,HEPG2@0.196567,HMEC@0.23897,HSMM@0.346799,HUVEC@0.090419,K562@0.378676,MCF7@0.0984315,NHEK@0.201764,NHLF@0.10226,SKNSHRA@0.606534, 0 0 0 0 ENSG00000187186.9 ENST00000416454.1 chr9:34665025-34666025 3 462 534 intergenic 10.18 1 1,1,1 1 0,0,0 131.008658008658 72.2734082397004 19.614 398.844155844156 138.822097378277 34.749 386.787878787879 94.3258426966292 35.951 0 0 cat,chimp,cow,dog,guinea_pig,horse,human,macaque,marmoset,mouse,opossum,orangutan,panda,pig,platypus,rabbit,rat, antisense antisense A549@0.588377,AG04450@0.285822,BJ@0.291434,GM12878@0.339602,H1HESC@1.26424,HELAS3@0.361475,HEPG2@0.196567,HMEC@0.23897,HSMM@0.346799,HUVEC@0.090419,K562@0.378676,MCF7@0.0984315,NHEK@0.201764,NHLF@0.10226,SKNSHRA@0.606534, 0 0 0 0 ENSG00000187186.9 ENST00000423809.1 chr9:34665025-34666109 3 474 606 intergenic 10.18 1 1,1,1 1 0,0,0 99.120253164557 119.171617161716 0 372.710970464135 192.546204620462 389 361.888185654008 151.079207920792 387.115 0 0 cat,chimp,cow,dog,guinea_pig,horse,human,macaque,marmoset,mouse,opossum,orangutan,panda,pig,platypus,rabbit,rat, antisense antisense A549@0.588377,AG04450@0.285822,BJ@0.291434,GM12878@0.339602,H1HESC@1.26424,HELAS3@0.361475,HEPG2@0.196567,HMEC@0.23897,HSMM@0.346799,HUVEC@0.090419,K562@0.378676,MCF7@0.0984315,NHEK@0.201764,NHLF@0.10226,SKNSHRA@0.606534, 0 0 0 0 ENSG00000187186.9 ENST00000544078.1 chr9:34665027-34666025 4 336 656 intergenic 23.77 1 1,1,1 1 0,0,0 156.154761904762 69.8323170731707 19.614 492.886904761905 139.807926829268 34.749 478.654761904762 102.417682926829 35.951 0 0 cat,chimp,cow,dog,elephant,guinea_pig,horse,human,macaque,marmoset,mouse,opossum,orangutan,panda,pig,rabbit,rat, antisense antisense A549@0.588377,AG04450@0.285822,BJ@0.291434,GM12878@0.339602,H1HESC@1.26424,HELAS3@0.361475,HEPG2@0.196567,HMEC@0.23897,HSMM@0.346799,HUVEC@0.090419,K562@0.378676,MCF7@0.0984315,NHEK@0.201764,NHLF@0.10226,SKNSHRA@0.606534, 0 0 0 0 ENSG00000230074.1 ENST00000434627.1 chr9:34665662-34681295 3 662 14967 intergenic -4.17 1 1,1,1 1 0,0,0 0 6.61047638137235 52.917 17.9803625377643 12.6798289570388 200.499 17.892749244713 14.2107970869246 169.538 0 0 chimp,horse,human,macaque,orangutan,pig,rabbit, antisense antisense A549@3.1304,AG04450@4.45742,BJ@3.24976,GM12878@0.627563,H1HESC@1.16036,HELAS3@0.646808,HEPG2@0.69396,HMEC@1.75484,HSMM@1.79327,HUVEC@0.210304,K562@7.83305,MCF7@1.96792,NHEK@4.52285,NHLF@1.96141,SKNSHRA@4.09431, 0 0 0 0 ENSG00000234181.1 ENST00000431804.1 chr9:35096375-35098138 2 423 1338 exonic 3.03 0 0,1,1 0 0,0,0 0 0 104.668 13.4042553191489 12.2391629297459 96.003 13.8014184397163 17.7585949177877 98.068 0 0 chimp,human,marmoset,orangutan, antisense antisense A549@0.358598,AG04450@0.122974,BJ@0.034362,GM12878@0.327326,H1HESC@0.262257,HELAS3@0.64501,HEPG2@0.537552,HMEC@0.028903,HSMM@0.225639,HUVEC@0.0607835,K562@0.229501,MCF7@0.54698,NHEK@0.0377097,NHLF@0,SKNSHRA@0.0439585, 0 0 0 0 ENSG00000231393.1 ENST00000457044.1 chr9:35642511-35643514 2 677 324 intergenic 3.93 0 0,0,0 0 0,0,0 0 0 0 0 0 0 0 0 0 0 0 chimp,human,macaque,orangutan, antisense antisense A549@0,AG04450@0,BJ@0.007252,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0.0241035,HMEC@0,HSMM@0.0067145,HUVEC@0,K562@0,MCF7@0.003028,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000227933.1 ENST00000428948.1 chr9:35646267-35647096 2 572 255 intergenic 12.74 0 0,1,1 0 0,0,0 0 0 0 15.3688811188811 0 5.338 12.2255244755245 0 5.389 0 0 chimp,elephant,human,macaque,marmoset,orangutan,pig,rabbit, antisense antisense A549@0,AG04450@0,BJ@0,GM12878@0.0075955,H1HESC@0,HELAS3@0.0092475,HEPG2@0.007581,HMEC@0.014267,HSMM@0,HUVEC@0,K562@0,MCF7@0.005348,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000228843.1 ENST00000425499.1 chr9:35756709-35757937 2 694 532 exonic 0.50 0 0,1,1 0 0,0,0 33.0691642651297 0 67.705 45.335734870317 3.95488721804511 74.085 47.6455331412104 9.80451127819549 79.766 0 0 cat,chimp,cow,dog,elephant,horse,human,macaque,marmoset,orangutan,panda,pig, antisense antisense A549@0.034922,AG04450@0.059137,BJ@0.0140285,GM12878@0.0211015,H1HESC@0.159731,HELAS3@0.0282385,HEPG2@0.191327,HMEC@0.011766,HSMM@0,HUVEC@0.20618,K562@0.0172585,MCF7@0,NHEK@0.0165657,NHLF@0,SKNSHRA@0.138854, 0 0 0 0 ENSG00000227388.1 ENST00000431981.1 chr9:35786643-35790429 2 405 3379 intergenic -4.29 0 0,0,1 0 0,0,0 0 3.38561704646345 0 6.2962962962963 5.19798757028707 9.108 9.53827160493827 63.2583604616751 9.9 0 0 chimp,cow,elephant,horse,human,marmoset,orangutan,rabbit, antisense antisense A549@2.54219,AG04450@0.0158455,BJ@0.131361,GM12878@2.89601,H1HESC@0.52348,HELAS3@1.88729,HEPG2@1.49137,HMEC@0.100605,HSMM@0,HUVEC@0.212828,K562@1.56637,MCF7@0.874522,NHEK@0.148254,NHLF@0.014382,SKNSHRA@2.28599, 0 0 0 0 ENSG00000235387.1 ENST00000443779.1 chr9:35909480-35911683 2 1610 591 intergenic 22.31 0 0,1,0 1 0,0,0 22.9155279503106 0 0 39.0236024844721 16.1252115059222 20.334 40.8968944099379 16.5109983079526 20.349 0 0 cat,chimp,cow,dog,elephant,horse,human,macaque,marmoset,mouse,orangutan,panda,pig, lincRNA processed_transcript A549@0.015667,AG04450@0.120852,BJ@0.205858,GM12878@0,H1HESC@0.254266,HELAS3@0.057372,HEPG2@0.02369,HMEC@0.152405,HSMM@1.2507,HUVEC@6.8285,K562@0.015178,MCF7@0.0050455,NHEK@0.001638,NHLF@0.186539,SKNSHRA@0.101291, 0 0 0 0 ENSG00000231518.1 ENST00000433838.1 chr9:35930009-35937148 3 354 6781 intergenic 1.57 0 0,1,0 0 0,0,0 0 29.0827311605958 0 0 26.5847220174016 0 0 28.2212063117534 0 0 0 chimp,human,macaque,marmoset,orangutan,pig, antisense antisense A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0.0166725,K562@0,MCF7@0,NHEK@0,NHLF@0.095138,SKNSHRA@0, 0 0 0 0 ENSG00000232214.1 ENST00000417311.1 chr9:36307039-36315276 2 502 7733 intergenic 6.35 0 0,0,0 0 0,0,0 0 0 0 0 0 5.253 0 0 4.173 0 0 chimp,elephant,human,orangutan,pig, antisense antisense A549@0.0270145,AG04450@0.0668755,BJ@0.006421,GM12878@0.04787,H1HESC@0.095934,HELAS3@0.05595,HEPG2@0.032853,HMEC@0,HSMM@0.131904,HUVEC@0.152996,K562@0.0245385,MCF7@0.012148,NHEK@0.0360277,NHLF@0.034542,SKNSHRA@0.107178, 0 0 0 0 ENSG00000224304.1 ENST00000426015.1 chr9:36332947-36334969 2 386 1634 intergenic -11.75 0 0,0,0 0 0,0,0 0 0 0 0 1.90146878824969 0 0 1.9969400244798 0 0 0 cat,chimp,horse,human,macaque,marmoset,orangutan, lincRNA lincRNA A549@0.0327835,AG04450@0.0271065,BJ@0.0636685,GM12878@0.188146,H1HESC@0.127825,HELAS3@0.162394,HEPG2@0.03902,HMEC@0,HSMM@0.0376935,HUVEC@0.206644,K562@0.020701,MCF7@0.0158975,NHEK@0.082896,NHLF@0.004973,SKNSHRA@0.095231, 0 0 0 0 ENSG00000250850.2 ENST00000509911.2 chr9:37002694-37008037 2 737 4604 exonic 15.66 0 0,1,1 0 0,0,0 0 94.5299739357081 71.822 64.7367706919946 103.857732406603 503.737 57.1411126187246 110.521937445699 486.239 0 0 cat,chimp,dog,elephant,guinea_pig,horse,human,macaque,marmoset,orangutan,panda, antisense antisense A549@0,AG04450@0,BJ@0.008758,GM12878@0.276996,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000232920.1 ENST00000426358.1 chr9:37073528-37075789 2 945 1314 intergenic -1.22 0 0,0,0 0 0,0,0 0 0 0 10.1365079365079 0 0 10.5301587301587 2.21917808219178 0 0 0 chimp,human,macaque,marmoset,orangutan, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0.0453625,H1HESC@0,HELAS3@0.007158,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0.0396035,MCF7@0,NHEK@0,NHLF@0.004121,SKNSHRA@0.008809, 99 2 0 0 ENSG00000233137.1 ENST00000429493.1 chr9:37079893-37090398 2 4373 6130 intergenic 3.07 0 1,1,1 1 0,0,0 0 20.8424143556281 0 20.8570775211525 67.2168026101142 12.007 20.9430596844272 66.1752039151713 18.58 0 0 chimp,human, lincRNA lincRNA A549@7.3529,AG04450@4.40217,BJ@3.1838,GM12878@10.5076,H1HESC@4.45434,HELAS3@8.33911,HEPG2@4.57681,HMEC@2.39224,HSMM@2.82712,HUVEC@2.67814,K562@5.8384,MCF7@5.6681,NHEK@3.23294,NHLF@5.75949,SKNSHRA@6.78026, 0 0 0 0 ENSG00000233137.1 ENST00000430809.1 chr9:37079932-37086871 2 309 6628 intergenic 2.27 0 0,1,0 1 0,0,0 0 19.2764031382016 0 152.844660194175 64.5900724200362 22.321 144.692556634304 62.5340977670489 28.597 0 0 cat,chimp,dog,guinea_pig,horse,human,macaque,marmoset,orangutan,rat, lincRNA lincRNA A549@7.3529,AG04450@4.40217,BJ@3.1838,GM12878@10.5076,H1HESC@4.45434,HELAS3@8.33911,HEPG2@4.57681,HMEC@2.39224,HSMM@2.82712,HUVEC@2.67814,K562@5.8384,MCF7@5.6681,NHEK@3.23294,NHLF@5.75949,SKNSHRA@6.78026, 0 0 0 0 ENSG00000233242.1 ENST00000426946.1 chr9:37112915-37115487 2 942 1628 intergenic -1.22 0 0,0,0 0 0,0,0 14.7133757961783 0 0 3.29830148619958 1.17444717444717 3.156 3.46390658174098 1.19410319410319 3.264 0 0 chimp,cow,human,macaque,marmoset,orangutan, antisense antisense A549@0.0022995,AG04450@0.013636,BJ@0.015381,GM12878@0.0213045,H1HESC@0,HELAS3@0.069201,HEPG2@0.0109735,HMEC@0,HSMM@0.0021795,HUVEC@0,K562@0.0765745,MCF7@0.019554,NHEK@0.00680767,NHLF@0.016352,SKNSHRA@0.0232655, 99 2 0 0 ENSG00000224648.1 ENST00000452923.1 chr9:37383175-37384431 2 241 1013 intergenic 0 0 0,0,0 0 0,0,0 0 0 24.61 0 2.12339585389931 33.325 0 4.70779861796644 45.723 0 0 chimp,human,macaque,orangutan, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000234160.1 ENST00000413915.1 chr9:37509147-37510296 2 287 860 intergenic -3.10 0 0,1,0 0 0,0,0 0 0 0 27.6515679442509 0 9.672 28.8780487804878 0 18.224 0 0 chimp,human,macaque,orangutan, antisense antisense A549@3.43132,AG04450@1.82566,BJ@1.55668,GM12878@2.83278,H1HESC@3.73453,HELAS3@8.03143,HEPG2@4.65625,HMEC@1.26097,HSMM@2.61526,HUVEC@0.728156,K562@6.28465,MCF7@1.31266,NHEK@3.31186,NHLF@1.21508,SKNSHRA@1.1161, 0 0 0 0 ENSG00000223716.1 ENST00000422554.1 chr9:38360424-38376427 4 665 15332 intergenic 1.50 0 0,1,0 0 0,0,0 0 16.3261153143752 0 4.31278195488722 19.6227498043308 0 6.41654135338346 19.5076963214192 1.632 0 0 chimp,cow,human,macaque,marmoset,orangutan,pig, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0.0215295,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0.139966, 0 0 0 0 ENSG00000228467.1 ENST00000444791.1 chr9:38848558-38851913 2 791 2562 intergenic -9.20 0 0,0,0 0 0,0,0 0 5.15222482435597 0 0 2.903981264637 0 0 5.28454332552693 0 0 0 human,macaque,orangutan,rabbit, lincRNA lincRNA A549@0.0039145,AG04450@0,BJ@0,GM12878@0.037821,H1HESC@0.007848,HELAS3@0,HEPG2@0.0332515,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0.0750495, 21 4 14 4 ENSG00000224038.1 ENST00000427327.1 chr9:39384503-39405302 3 473 20322 intergenic 3.30 0 0,0,0 0 0,0,0 0 0 0 0 0 0 146.067653276956 24.0452711347308 80.84 0 0 chimp,cow,dog,horse,human,macaque,marmoset,orangutan, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 51 3 29 3 ENSG00000231140.1 ENST00000423499.1 chr9:39395734-39397403 2 1075 592 intergenic -0.79 1 0,0,0 0 0,0,0 0 0 0 0 0 0 0 0 0 0 0 chimp,horse,human,macaque,orangutan, lincRNA lincRNA A549@0.0060465,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 2 44 21 3 ENSG00000228534.1 ENST00000433614.1 chr9:39925026-39926970 2 1123 819 intergenic -1.38 1 0,0,0 0 0,0,0 0 0 0 0 0 0 0 0 0 0 0 chimp,human,macaque,orangutan, lincRNA lincRNA A549@0.0524425,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0.0241865,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 2 44 21 3 ENSG00000235283.2 ENST00000432614.1 chr9:40704468-40713709 2 1986 7253 exonic 10.80 1 0,0,0 0 0,0,0 0 4.036122983593 0 0 1.01447676823383 0 0 8.36247070177858 0 0 0 chimp,human,macaque,orangutan, processed_transcript processed_transcript A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0.004942,MCF7@0,NHEK@0.10269,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000236361.1 ENST00000445963.1 chr9:40740776-40742447 2 845 824 intergenic -2.22 0 0,0,0 0 0,0,0 0 0 0 0 0 0 0 0 0 0 0 chimp,human,macaque,orangutan, lincRNA lincRNA A549@0.0083865,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0.009458,K562@0,MCF7@0,NHEK@0.00904267,NHLF@0,SKNSHRA@0, 2 44 0 0 ENSG00000223781.1 ENST00000411776.1 chr9:41277733-41298538 3 473 20328 intergenic 3.30 0 0,0,0 0 0,0,0 0 0 0 0 0 0 89.3023255813954 15.400875639512 100.222 0 0 chimp,cow,dog,horse,human,macaque,marmoset,orangutan, antisense antisense A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 51 3 29 3 ENSG00000228858.1 ENST00000450779.1 chr9:41285357-41287306 2 1124 823 intergenic -2.22 1 0,0,0 0 0,0,0 0 0 0 0 0 0 0 0 0 0 0 chimp,human,macaque,orangutan, antisense antisense A549@0.0063085,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0.002643,K562@0,MCF7@0,NHEK@0.00226733,NHLF@0,SKNSHRA@0, 2 44 21 3 ENSG00000231391.1 ENST00000440883.1 chr9:41313945-41323179 2 1986 7246 exonic 9.40 1 0,0,0 0 0,0,0 0 0 0 0 0 0 0 23.4979298923544 0 0 0 chimp,human,macaque,orangutan,pig, antisense antisense A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0.0037065,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000234407.3 ENST00000419990.1 chr9:41516046-41523018 2 1716 5254 intergenic 10.70 0 0,1,0 0 0,0,0 0 0 0 0 1.81956604491816 0 126.199300699301 6.24514655500571 0 0 0 chimp,human,macaque,orangutan, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0.0112655,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0.0641875,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 82 2 46 2 ENSG00000234407.3 ENST00000538713.1 chr9:41516054-41521999 3 772 5169 intergenic 10.70 0 0,1,0 0 0,0,0 0 0 0 0 1.84948732830335 0 280.515544041451 6.3478429096537 0 0 1 chimp,human,marmoset,orangutan, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0.0112655,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0.0641875,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 115 2 68 2 ENSG00000227084.1 ENST00000415013.1 chr9:41529583-41550387 3 479 20321 intergenic 3.30 0 0,0,0 0 0,0,0 0 0 0 0 0 0 288.958246346555 28.6966684710398 71.994 0 0 chimp,cow,dog,horse,human,macaque,marmoset,orangutan, lincRNA lincRNA A549@0.022922,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0.03398,HSMM@0,HUVEC@0.0493945,K562@0,MCF7@0,NHEK@0.00819867,NHLF@0,SKNSHRA@0, 51 3 29 3 ENSG00000204836.4 ENST00000377613.3 chr9:41952399-41955076 2 2579 96 intergenic 6.22 0 1,1,1 0 0,1,0 0 0 0 0 0 0 0 0 0 0 1 chimp,human,orangutan, lincRNA lincRNA A549@3.98321,AG04450@0.928819,BJ@1.23118,GM12878@3.4021,H1HESC@2.92807,HELAS3@1.32645,HEPG2@0.302437,HMEC@1.66867,HSMM@1.481,HUVEC@3.56005,K562@0.0390335,MCF7@4.12303,NHEK@0.714298,NHLF@0.999107,SKNSHRA@5.28826, 16 4 10 4 ENSG00000204836.4 ENST00000355952.4 chr9:41952715-41955031 3 1475 837 intergenic 8.80 0 1,1,1 0 0,1,0 0 0 0 0 0 0 0 0 0 0 1 chimp,human,orangutan, lincRNA lincRNA A549@3.98321,AG04450@0.928819,BJ@1.23118,GM12878@3.4021,H1HESC@2.92807,HELAS3@1.32645,HEPG2@0.302437,HMEC@1.66867,HSMM@1.481,HUVEC@3.56005,K562@0.0390335,MCF7@4.12303,NHEK@0.714298,NHLF@0.999107,SKNSHRA@5.28826, 0 0 12 4 ENSG00000204837.2 ENST00000454645.1 chr9:41961615-42019580 3 1887 56074 intergenic 5.96 0 0,1,1 0 0,0,0 0 0 0 257.983041865395 0.306363020294611 0 413.328563857976 14.4404358526233 0 0 0 chimp,human,macaque,marmoset,opossum,orangutan,pig,rabbit, lincRNA lincRNA A549@0.455157,AG04450@0.746704,BJ@0.271151,GM12878@0.584942,H1HESC@0.459214,HELAS3@0.51805,HEPG2@0.109449,HMEC@0.543784,HSMM@0.225393,HUVEC@0.338736,K562@0.059481,MCF7@0.834736,NHEK@0.357578,NHLF@0.771899,SKNSHRA@0.681717, 0 0 0 0 ENSG00000228136.1 ENST00000425632.1 chr9:42275939-42298165 3 344 21878 intergenic 9.24 1 0,0,1 0 0,0,0 0 0 0 0 1.24440076789469 0 180.517441860465 5.66116646859859 35.949 0 0 chimp,cow,dog,human,macaque,marmoset,orangutan, processed_transcript processed_transcript A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 53 3 32 3 ENSG00000233207.1 ENST00000450520.1 chr9:42363048-42367092 2 3198 844 intergenic 0.30 0 0,0,0 0 0,0,0 0 0 0 0 0 0 0 0 0 0 0 chimp,human, antisense antisense A549@0.103677,AG04450@0,BJ@0.002236,GM12878@0.043076,H1HESC@0.0237565,HELAS3@0.0047295,HEPG2@0,HMEC@0.002559,HSMM@0.001286,HUVEC@0.005564,K562@0.01384,MCF7@0.010081,NHEK@0.00895433,NHLF@0.001206,SKNSHRA@0.047339, 0 0 0 0 ENSG00000223839.2 ENST00000455995.1 chr9:42466317-42474236 4 4232 3681 intergenic 4.30 0 0,0,0 0 0,0,0 0 0 0 0 0 0 11.3643667296786 46.440912795436 0 0 0 chimp,human,macaque,marmoset,orangutan, processed_transcript processed_transcript A549@0.059696,AG04450@0,BJ@0.001958,GM12878@0.458854,H1HESC@0.03251,HELAS3@0.0216235,HEPG2@0.0073115,HMEC@0.002754,HSMM@0.0026495,HUVEC@0.413058,K562@0.16945,MCF7@0.048972,NHEK@0.0296237,NHLF@0.000367,SKNSHRA@0.010634, 0 0 0 0 ENSG00000233244.2 ENST00000453998.1 chr9:43027748-43032877 4 779 4344 intergenic -1.36 0 0,0,0 0 0,0,0 0 0 0 0 0 0 0 63.884438305709 0 0 0 chimp,elephant,horse,human,macaque,marmoset,orangutan, processed_transcript processed_transcript A549@0.123306,AG04450@0,BJ@0.008266,GM12878@0.656165,H1HESC@0.194639,HELAS3@0.089491,HEPG2@0.0236395,HMEC@0.015688,HSMM@0,HUVEC@0.63646,K562@0.570449,MCF7@0,NHEK@0.044945,NHLF@0,SKNSHRA@0.0403865, 0 0 0 0 ENSG00000237587.1 ENST00000439245.1 chr9:43102670-43113375 3 253 10448 exonic 2.74 0 0,0,0 0 0,0,0 0 0 0 0 1.66424196018377 0 0 5.14988514548239 0 0 0 cat,chimp,horse,human,macaque,marmoset,orangutan, antisense antisense A549@0,AG04450@0.0077725,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0.014976, 0 0 0 0 ENSG00000237587.1 ENST00000453946.1 chr9:43102670-43113467 2 301 10494 intronic 0 0 0,0,0 0 0,0,0 0 0 0 0 1.65694682675815 0 0 5.12731084429198 0 0 0 cat,chimp,dog,horse,human,macaque,marmoset,orangutan,pig, antisense antisense A549@0,AG04450@0.0077725,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0.014976, 0 0 0 0 ENSG00000233074.1 ENST00000453939.1 chr9:43140537-43142739 2 380 1820 intergenic -1.48 0 0,0,0 0 0,0,0 0 0 0 0 0 0 0 0 0 0 0 chimp,human,macaque,marmoset,mouse,orangutan,rabbit, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0.0184085,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0.3409,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0.0582355, 0 0 0 0 ENSG00000224303.1 ENST00000447613.1 chr9:43144980-43160008 3 954 14070 intergenic 2.65 0 0,0,0 0 0,0,0 0 0 0 0 0 0 0 14.0226012793177 0 0 0 chimp,human,macaque,orangutan, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0.016279,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0.330125,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000236322.1 ENST00000450911.1 chr9:43184023-43189411 5 1756 3624 intergenic 7.69 1 0,0,0 0 0,0,0 0 0 0 102.768223234624 27.2996688741722 47.964 105.685649202733 29.7922185430464 58.82 0 0 cat,chimp,cow,dog,elephant,horse,human,macaque,marmoset,mouse,orangutan,panda,rabbit,rat, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0.007068,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0.002337,HUVEC@0.031944,K562@0,MCF7@0.002335,NHEK@0,NHLF@0.0087655,SKNSHRA@0, 0 0 0 0 ENSG00000233424.1 ENST00000439824.1 chr9:44256189-44263319 3 3612 3514 intergenic -1.94 0 0,0,0 0 0,0,0 0 0 0 0 0 0 0 103.330392714855 0 0 0 chimp,human,macaque,marmoset,orangutan, lincRNA lincRNA A549@0,AG04450@0.002676,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0.0017075,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0.002232, 31 3 0 0 ENSG00000229311.1 ENST00000425493.1 chr9:44384585-44391705 3 3611 3505 intergenic 1.06 0 0,0,0 0 0,0,0 0 0 0 0 0 0 0 0 0 0 0 chimp,human,macaque,marmoset,orangutan, lincRNA lincRNA A549@0,AG04450@0.0125675,BJ@0,GM12878@0.00371,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0.0045545,HUVEC@0,K562@0.0190025,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0.0363165, 31 3 0 0 ENSG00000237357.1 ENST00000435586.1 chr9:44401766-44404440 2 2577 95 intergenic 1.24 0 0,0,0 0 0,0,0 0 0 0 0 0 0 0 0 0 0 0 chimp,human,orangutan, lincRNA lincRNA A549@10.1949,AG04450@0.1873,BJ@0.132854,GM12878@1.69144,H1HESC@0.230155,HELAS3@0.113585,HEPG2@0.0150425,HMEC@0.612372,HSMM@0.107425,HUVEC@1.16513,K562@0.0126045,MCF7@0.615831,NHEK@0.38294,NHLF@0.283659,SKNSHRA@1.38869, 16 4 10 4 ENSG00000237357.1 ENST00000428895.1 chr9:44401809-44404126 3 1476 837 intergenic 4.54 0 0,0,1 0 0,0,0 0 0 0 0 0 0 0 0 0 0 0 chimp,human,orangutan, lincRNA lincRNA A549@10.1949,AG04450@0.1873,BJ@0.132854,GM12878@1.69144,H1HESC@0.230155,HELAS3@0.113585,HEPG2@0.0150425,HMEC@0.612372,HSMM@0.107425,HUVEC@1.16513,K562@0.0126045,MCF7@0.615831,NHEK@0.38294,NHLF@0.283659,SKNSHRA@1.38869, 0 0 12 4 ENSG00000237357.1 ENST00000425309.1 chr9:44402460-44403260 2 255 543 intergenic -0.65 0 0,0,0 0 0,0,0 0 0 0 0 0 0 0 0 0 0 0 chimp,human,orangutan, lincRNA lincRNA A549@10.1949,AG04450@0.1873,BJ@0.132854,GM12878@1.69144,H1HESC@0.230155,HELAS3@0.113585,HEPG2@0.0150425,HMEC@0.612372,HSMM@0.107425,HUVEC@1.16513,K562@0.0126045,MCF7@0.615831,NHEK@0.38294,NHLF@0.283659,SKNSHRA@1.38869, 55 3 34 3 ENSG00000231248.1 ENST00000419207.1 chr9:44823713-44835521 4 715 11087 intergenic 1.51 0 0,1,1 0 0,0,0 0 0 0 40.1538461538462 23.663750338234 86.87 39.9916083916084 23.0632272030306 85.85 0 0 chimp,cow,horse,human,macaque,marmoset,orangutan, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0.00177533,NHLF@0,SKNSHRA@0.006311, 0 0 0 0 ENSG00000235659.1 ENST00000377547.3 chr9:45001907-45003117 2 437 771 intergenic 0.63 0 0,0,0 0 0,0,0 0 0 0 116.652173913043 11.5966277561608 118.331 78.1304347826087 19.5512321660182 120.186 0 0 chimp,elephant,guinea_pig,horse,human,macaque,marmoset,orangutan,panda,pig,rabbit,rat, lincRNA lincRNA A549@0,AG04450@0.0220355,BJ@0,GM12878@0.0191155,H1HESC@0.0281835,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0.430964,MCF7@0,NHEK@0,NHLF@0.194035,SKNSHRA@0, 0 0 0 0 ENSG00000223379.1 ENST00000421848.1 chr9:45004879-45023236 2 490 17865 intergenic 2.19 0 0,0,0 0 0,0,0 0 0 0 7.80612244897959 58.3968094038623 235.12 8.11224489795918 61.5853344528408 240.354 0 0 cat,chimp,dog,horse,human,macaque,orangutan,panda,pig, lincRNA lincRNA A549@0.958023,AG04450@0.050284,BJ@0.552448,GM12878@3.13345,H1HESC@0.504609,HELAS3@2.63047,HEPG2@2.62752,HMEC@0.066579,HSMM@0.212927,HUVEC@2.17717,K562@1.24828,MCF7@0,NHEK@1.13526,NHLF@0,SKNSHRA@1.45282, 50 3 0 0 ENSG00000229697.1 ENST00000441101.1 chr9:45034957-45047145 4 715 11467 intergenic 1.56 0 0,0,0 0 0,0,0 0 0 0 38.6643356643357 21.3313857155315 95.94 38.4251748251748 21.7220720327897 94.32 0 0 chimp,cow,horse,human,macaque,marmoset,orangutan,rabbit, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0.008585,HUVEC@0,K562@0,MCF7@0,NHEK@0.00710167,NHLF@0,SKNSHRA@0.0621465, 0 0 0 0 ENSG00000231527.1 ENST00000443347.1 chr9:45108392-45112532 3 928 3208 intergenic 7.11 0 0,0,0 0 0,0,0 0 0 0 0 0 0 0 0 0 0 0 chimp,human,macaque,orangutan, lincRNA lincRNA A549@0.0193885,AG04450@0,BJ@0.0026445,GM12878@0.0662765,H1HESC@0.0241815,HELAS3@0.0575095,HEPG2@0.0501925,HMEC@0.033164,HSMM@0,HUVEC@0.007835,K562@0.012068,MCF7@0,NHEK@0.0377047,NHLF@0,SKNSHRA@0.0703775, 97 2 0 0 ENSG00000231527.1 ENST00000399894.2 chr9:45108421-45109831 2 577 831 intergenic -3.68 0 0,0,0 0 0,0,0 0 0 0 0 0 0 0 0 0 0 0 chimp,human,macaque,orangutan, lincRNA lincRNA A549@0.0193885,AG04450@0,BJ@0.0026445,GM12878@0.0662765,H1HESC@0.0241815,HELAS3@0.0575095,HEPG2@0.0501925,HMEC@0.033164,HSMM@0,HUVEC@0.007835,K562@0.012068,MCF7@0,NHEK@0.0377047,NHLF@0,SKNSHRA@0.0703775, 0 0 64 2 ENSG00000231527.1 ENST00000439760.1 chr9:45108581-45112467 4 743 3137 intergenic 7.11 0 0,0,0 0 0,0,0 0 0 0 0 0 0 0 0 0 0 0 chimp,human,macaque,marmoset,orangutan, lincRNA lincRNA A549@0.0193885,AG04450@0,BJ@0.0026445,GM12878@0.0662765,H1HESC@0.0241815,HELAS3@0.0575095,HEPG2@0.0501925,HMEC@0.033164,HSMM@0,HUVEC@0.007835,K562@0.012068,MCF7@0,NHEK@0.0377047,NHLF@0,SKNSHRA@0.0703775, 0 0 0 0 ENSG00000231838.1 ENST00000417850.1 chr9:45164578-45212501 3 888 47031 intergenic -9.20 0 0,0,0 0 0,0,0 0 0 0 0 0.924326508047883 0 0 0.971210478195233 0 0 0 human,macaque,orangutan, lincRNA lincRNA A549@0.0069675,AG04450@0,BJ@0,GM12878@0.029637,H1HESC@0.0069845,HELAS3@0,HEPG2@0.0295945,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0.059156, 21 4 14 4 ENSG00000235037.1 ENST00000442207.1 chr9:45393845-45415976 3 353 21774 intergenic 9.24 0 0,0,0 0 0,0,0 0 0 0 0 0.340268209791494 0 188.892351274788 4.91246440709103 56.995 0 0 chimp,cow,dog,horse,human,macaque,marmoset,orangutan,panda,pig,rabbit, processed_transcript processed_transcript A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 53 3 32 3 ENSG00000232116.1 ENST00000425742.1 chr9:45484572-45488153 2 386 3193 intergenic 1.97 0 0,0,0 0 0,0,0 0 0 0 0 29.0263075477607 0 0 32.1475101785155 0 0 0 chimp,cow,dog,horse,human,macaque,marmoset,orangutan,panda,rabbit, lincRNA lincRNA A549@1.05637,AG04450@0.492704,BJ@0.42563,GM12878@1.60221,H1HESC@0.125332,HELAS3@0.815407,HEPG2@1.15775,HMEC@0.073872,HSMM@0.153635,HUVEC@0.259932,K562@3.46513,MCF7@0.92232,NHEK@0.853192,NHLF@0.110132,SKNSHRA@1.42075, 176 2 114 2 ENSG00000225353.1 ENST00000418666.1 chr9:46270786-46274928 3 928 3210 intergenic 7.11 0 0,0,0 0 0,0,0 0 0 0 0 5.7196261682243 0 0 5.88909657320872 0 0 0 chimp,human,macaque,orangutan, lincRNA lincRNA A549@0.00763,AG04450@0,BJ@0,GM12878@0.058862,H1HESC@0.014798,HELAS3@0.0337755,HEPG2@0.0209535,HMEC@0.008796,HSMM@0,HUVEC@0.007835,K562@0.010502,MCF7@0,NHEK@0.017428,NHLF@0,SKNSHRA@0.0302525, 0 0 0 0 ENSG00000225353.1 ENST00000416205.1 chr9:46270851-46274899 4 1010 3032 intergenic 7.11 0 0,0,0 0 0,0,0 0 0 0 0 6.05540897097625 0 0 6.23482849604222 0 0 0 chimp,human,macaque,orangutan, lincRNA lincRNA A549@0.00763,AG04450@0,BJ@0,GM12878@0.058862,H1HESC@0.014798,HELAS3@0.0337755,HEPG2@0.0209535,HMEC@0.008796,HSMM@0,HUVEC@0.007835,K562@0.010502,MCF7@0,NHEK@0.017428,NHLF@0,SKNSHRA@0.0302525, 97 2 64 2 ENSG00000231481.1 ENST00000452477.1 chr9:46359242-46380257 2 526 20487 intergenic 2.19 0 0,0,0 0 0,0,0 0 0 0 7.0722433460076 61.7700004881144 224.798 7.38593155893536 65.40738028994 246.802 0 0 cat,chimp,cow,dog,elephant,horse,human,macaque,marmoset,orangutan,panda,pig, antisense antisense A549@0.666309,AG04450@0.0412485,BJ@0.376933,GM12878@1.86305,H1HESC@0.372296,HELAS3@1.54257,HEPG2@1.37739,HMEC@0.564521,HSMM@0,HUVEC@1.25488,K562@0.785618,MCF7@0,NHEK@0.512897,NHLF@0,SKNSHRA@0.813131, 50 3 0 0 ENSG00000231212.1 ENST00000438072.1 chr9:46661242-46662593 3 540 807 intergenic 0.59 0 0,0,0 0 0,0,0 0 0 0 0 0 0 0 0 0 0 0 chimp,horse,human,macaque,marmoset,orangutan,panda, lincRNA lincRNA A549@0.0602975,AG04450@0.120977,BJ@0.122593,GM12878@0.0835575,H1HESC@0.0731505,HELAS3@0,HEPG2@0.0055105,HMEC@0.01577,HSMM@0.011368,HUVEC@0.0415975,K562@0,MCF7@0.0350715,NHEK@0.109116,NHLF@0.0191775,SKNSHRA@0.351046, 0 0 0 0 ENSG00000231212.1 ENST00000448491.1 chr9:46661444-46662837 2 493 898 intergenic 2.50 0 0,0,0 0 0,0,0 0 0 0 0 0 0 0 0 0 0 0 cat,chimp,cow,dog,elephant,horse,human,macaque,marmoset,orangutan,panda,pig,rabbit, lincRNA lincRNA A549@0.0602975,AG04450@0.120977,BJ@0.122593,GM12878@0.0835575,H1HESC@0.0731505,HELAS3@0,HEPG2@0.0055105,HMEC@0.01577,HSMM@0.011368,HUVEC@0.0415975,K562@0,MCF7@0.0350715,NHEK@0.109116,NHLF@0.0191775,SKNSHRA@0.351046, 0 0 0 0 ENSG00000204802.3 ENST00000377518.3 chr9:46685429-46688084 2 2539 114 intergenic 5.64 0 0,1,0 0 0,0,0 0 0 0 0 0 0 0 0 0 0 0 chimp,human,orangutan, lincRNA processed_transcript A549@4.80208,AG04450@1.77693,BJ@2.00305,GM12878@3.91435,H1HESC@9.77065,HELAS3@1.48674,HEPG2@0.458981,HMEC@2.97372,HSMM@1.94339,HUVEC@7.80105,K562@0.030417,MCF7@6.18399,NHEK@1.61018,NHLF@1.01113,SKNSHRA@5.81781, 16 4 10 4 ENSG00000204802.3 ENST00000429818.1 chr9:46685763-46688081 3 1477 837 intergenic 5.08 0 0,1,0 0 0,0,0 0 0 0 0 0 0 0 0 0 0 0 chimp,human,orangutan, lincRNA processed_transcript A549@4.80208,AG04450@1.77693,BJ@2.00305,GM12878@3.91435,H1HESC@9.77065,HELAS3@1.48674,HEPG2@0.458981,HMEC@2.97372,HSMM@1.94339,HUVEC@7.80105,K562@0.030417,MCF7@6.18399,NHEK@1.61018,NHLF@1.01113,SKNSHRA@5.81781, 0 0 12 4 ENSG00000204802.3 ENST00000412631.1 chr9:46686629-46687427 2 254 542 intergenic -2.64 0 0,0,0 0 0,0,0 0 0 0 0 0 0 0 0 0 0 0 chimp,human,macaque,orangutan, lincRNA processed_transcript A549@4.80208,AG04450@1.77693,BJ@2.00305,GM12878@3.91435,H1HESC@9.77065,HELAS3@1.48674,HEPG2@0.458981,HMEC@2.97372,HSMM@1.94339,HUVEC@7.80105,K562@0.030417,MCF7@6.18399,NHEK@1.61018,NHLF@1.01113,SKNSHRA@5.81781, 55 3 34 3 ENSG00000204802.3 ENST00000430302.1 chr9:46686633-46688137 2 779 723 intergenic 4.27 0 0,1,0 0 0,0,0 0 0 0 0 0 0 0 0 0 0 0 chimp,human,macaque,orangutan, lincRNA processed_transcript A549@4.80208,AG04450@1.77693,BJ@2.00305,GM12878@3.91435,H1HESC@9.77065,HELAS3@1.48674,HEPG2@0.458981,HMEC@2.97372,HSMM@1.94339,HUVEC@7.80105,K562@0.030417,MCF7@6.18399,NHEK@1.61018,NHLF@1.01113,SKNSHRA@5.81781, 0 0 0 0 ENSG00000233651.1 ENST00000428709.1 chr9:46698574-46705305 3 3220 3507 intergenic 0.68 1 0,0,0 0 0,0,0 0 0 0 0 0 0 0 2.56372968349016 0 0 0 chimp,human,macaque,marmoset,orangutan, lincRNA lincRNA A549@0,AG04450@0.005088,BJ@0,GM12878@0.00208,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0.004469,HUVEC@0,K562@0.008368,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0.021844, 31 3 0 0 ENSG00000226007.1 ENST00000450704.1 chr9:46843638-46846025 3 1546 837 intergenic 4.54 0 0,0,0 0 0,0,0 0 0 0 0 0 0 0 0 0 0 0 chimp,human,orangutan, lincRNA lincRNA A549@9.08657,AG04450@0.241196,BJ@0.09685,GM12878@1.62901,H1HESC@0.135964,HELAS3@0.0525705,HEPG2@0.012892,HMEC@0.662802,HSMM@0.13622,HUVEC@1.29049,K562@0.0137085,MCF7@1.06964,NHEK@0.404774,NHLF@0.221722,SKNSHRA@1.07489, 0 0 12 4 ENSG00000226007.1 ENST00000446626.1 chr9:46843705-46846357 2 2537 113 intergenic 5.38 0 0,0,0 0 0,0,0 0 0 0 0 0 0 0 0 0 0 0 chimp,human,orangutan, lincRNA lincRNA A549@9.08657,AG04450@0.241196,BJ@0.09685,GM12878@1.62901,H1HESC@0.135964,HELAS3@0.0525705,HEPG2@0.012892,HMEC@0.662802,HSMM@0.13622,HUVEC@1.29049,K562@0.0137085,MCF7@1.06964,NHEK@0.404774,NHLF@0.221722,SKNSHRA@1.07489, 16 4 10 4 ENSG00000226007.1 ENST00000420615.1 chr9:46844359-46845159 2 255 543 intergenic -0.65 0 0,0,0 0 0,0,0 0 0 0 0 0 0 0 0 0 0 0 chimp,human,orangutan, lincRNA lincRNA A549@9.08657,AG04450@0.241196,BJ@0.09685,GM12878@1.62901,H1HESC@0.135964,HELAS3@0.0525705,HEPG2@0.012892,HMEC@0.662802,HSMM@0.13622,HUVEC@1.29049,K562@0.0137085,MCF7@1.06964,NHEK@0.404774,NHLF@0.221722,SKNSHRA@1.07489, 55 3 34 3 ENSG00000203372.2 ENST00000366195.2 chr9:65467783-65469026 2 417 824 intergenic -1.38 0 0,0,0 0 0,0,0 0 0 0 0 0 0 0 0 0 0 0 chimp,human,macaque,orangutan, lincRNA lincRNA A549@0.074405,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0.0200085,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 2 44 0 0 ENSG00000229746.1 ENST00000377512.1 chr9:65487273-65494248 2 1720 5253 intergenic 10.70 0 0,0,0 0 0,0,0 0 0 0 0 0 0 122.651162790698 2.59508852084523 61.701 0 0 chimp,human,macaque,orangutan, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0.003755,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0.0682355,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 82 2 46 2 ENSG00000229746.1 ENST00000418603.1 chr9:65488296-65494240 3 772 5168 intergenic 10.70 0 0,0,0 0 0,0,0 0 0 0 0 0 0 269.19170984456 2.63777089783282 64.845 0 0 chimp,human,marmoset,orangutan, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0.003755,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0.0682355,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 115 2 68 2 ENSG00000233022.1 ENST00000448485.1 chr9:65880533-65883885 2 791 2559 intergenic -9.20 0 0,0,0 0 0,0,0 0 0 0 0 0 0 0 0 0 0 0 human,macaque,orangutan,rabbit, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0.094041,H1HESC@0.007848,HELAS3@0,HEPG2@0.0332515,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0.0550075, 21 4 14 4 ENSG00000238113.1 ENST00000427509.1 chr9:66457285-66466010 3 644 8077 intergenic -1.49 0 0,1,0 1 0,0,0 0 0 0 0 0 0 0 0 24.699 0 0 chimp,horse,human,macaque,orangutan,pig, lincRNA processed_transcript A549@0.037781,AG04450@0.636314,BJ@0.450406,GM12878@4.48194,H1HESC@0.0143125,HELAS3@1.10732,HEPG2@1.77225,HMEC@0.427949,HSMM@0.065567,HUVEC@0.289869,K562@0.511589,MCF7@0.727213,NHEK@0.539634,NHLF@0.073063,SKNSHRA@3.07095, 0 0 0 0 ENSG00000238113.1 ENST00000424345.1 chr9:66457289-66469310 5 2872 9141 intergenic 5.19 1 0,1,0 1 0,0,0 0 0 0 0 0 0 0 0 24.699 0 0 chimp,human,orangutan, lincRNA processed_transcript A549@0.037781,AG04450@0.636314,BJ@0.450406,GM12878@4.48194,H1HESC@0.0143125,HELAS3@1.10732,HEPG2@1.77225,HMEC@0.427949,HSMM@0.065567,HUVEC@0.289869,K562@0.511589,MCF7@0.727213,NHEK@0.539634,NHLF@0.073063,SKNSHRA@3.07095, 0 0 0 0 ENSG00000238113.1 ENST00000452184.1 chr9:66457900-66470542 4 453 12183 intergenic -5.54 0 0,1,0 1 0,0,0 0 0 0 0 0 0 0 0 0 0 0 chimp,human,macaque,orangutan, lincRNA processed_transcript A549@0.037781,AG04450@0.636314,BJ@0.450406,GM12878@4.48194,H1HESC@0.0143125,HELAS3@1.10732,HEPG2@1.77225,HMEC@0.427949,HSMM@0.065567,HUVEC@0.289869,K562@0.511589,MCF7@0.727213,NHEK@0.539634,NHLF@0.073063,SKNSHRA@3.07095, 0 0 0 0 ENSG00000234665.1 ENST00000438699.1 chr9:66523532-66529391 3 839 5016 intergenic 1.91 0 0,0,0 0 0,0,0 0 0 0 0 0 0 0 0 0 0 0 chimp,human,macaque,orangutan, lincRNA processed_transcript A549@0.109685,AG04450@0.057471,BJ@0.023599,GM12878@0.438794,H1HESC@0.980094,HELAS3@0.574796,HEPG2@0.115731,HMEC@0.725882,HSMM@0,HUVEC@0.104936,K562@0.02474,MCF7@0.068823,NHEK@0.0477573,NHLF@0.0230925,SKNSHRA@0.1173, 0 0 0 0 ENSG00000234665.1 ENST00000445604.1 chr9:66523813-66553911 3 1026 29068 exonic 5.96 1 0,1,0 0 0,0,0 0 0 0 0 29.1260492637952 0 0 67.4218384477776 50.421 0 0 human, lincRNA processed_transcript A549@0.109685,AG04450@0.057471,BJ@0.023599,GM12878@0.438794,H1HESC@0.980094,HELAS3@0.574796,HEPG2@0.115731,HMEC@0.725882,HSMM@0,HUVEC@0.104936,K562@0.02474,MCF7@0.068823,NHEK@0.0477573,NHLF@0.0230925,SKNSHRA@0.1173, 0 0 0 0 ENSG00000234665.1 ENST00000415872.1 chr9:66523963-66533431 4 393 9069 intergenic 1.91 0 0,0,1 0 0,0,0 0 0 0 0 2.6235527621568 0 0 2.75940015437204 0 0 0 chimp,human,macaque,marmoset,orangutan, lincRNA processed_transcript A549@0.109685,AG04450@0.057471,BJ@0.023599,GM12878@0.438794,H1HESC@0.980094,HELAS3@0.574796,HEPG2@0.115731,HMEC@0.725882,HSMM@0,HUVEC@0.104936,K562@0.02474,MCF7@0.068823,NHEK@0.0477573,NHLF@0.0230925,SKNSHRA@0.1173, 0 0 0 0 ENSG00000256208.1 ENST00000542122.1 chr9:66692393-66697441 3 2537 2507 intergenic 1.43 0 0,0,0 0 0,0,0 0 0 0 0 0 0 50.6732361056366 26.1499800558436 0 0 1 chimp,human,macaque,orangutan, lincRNA lincRNA A549@0,AG04450@0.006993,BJ@0.002908,GM12878@0.0277455,H1HESC@0.0034375,HELAS3@0.00493,HEPG2@0.00257,HMEC@0,HSMM@0,HUVEC@0.016512,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0.0063535, 0 0 0 0 ENSG00000230857.1 ENST00000446288.1 chr9:66720898-66759372 5 502 37964 intergenic -16.54 1 0,0,0 0 0,0,0 0 0 0 0 0.747602992308503 0 31.0398406374502 2.7625381940786 0 0 0 chimp,human,macaque,marmoset,orangutan, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0.0085825,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 178 2 0 0 ENSG00000230857.1 ENST00000439342.1 chr9:66742304-66759357 2 303 16748 intergenic -16.54 1 0,0,0 0 0,0,0 0 0 0 0 1.69465010747552 0 0 2.27465966085503 0 0 0 chimp,human,macaque,marmoset,orangutan, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0.0085825,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000182021.4 ENST00000426350.1 chr9:67017400-67030982 4 2025 11551 intergenic 8.23 0 0,0,0 0 0,0,0 0 0 0 60.2493827160494 16.0317721409402 0 104.381234567901 22.0602545234179 9.234 0 0 chimp,human,macaque,marmoset,orangutan, lincRNA lincRNA A549@0.054572,AG04450@0.001589,BJ@0,GM12878@0.030887,H1HESC@0.0028685,HELAS3@0.352036,HEPG2@0.925079,HMEC@0.074668,HSMM@0,HUVEC@0.754953,K562@0.042785,MCF7@0.0165755,NHEK@0.2536,NHLF@0.001504,SKNSHRA@0.219217, 0 0 0 0 ENSG00000182021.4 ENST00000315293.2 chr9:67017400-67032072 4 2562 12104 intergenic 8.23 0 0,1,0 0 0,0,0 0 0 0 45.9785323965652 15.6469762062128 2.629 80.6143637782982 22.2350462656973 2.761 0 0 chimp,human,macaque,marmoset, lincRNA lincRNA A549@0.054572,AG04450@0.001589,BJ@0,GM12878@0.030887,H1HESC@0.0028685,HELAS3@0.352036,HEPG2@0.925079,HMEC@0.074668,HSMM@0,HUVEC@0.754953,K562@0.042785,MCF7@0.0165755,NHEK@0.2536,NHLF@0.001504,SKNSHRA@0.219217, 0 0 0 0 ENSG00000223408.1 ENST00000441326.1 chr9:67579807-67583159 2 790 2560 intergenic -9.20 0 0,0,0 0 0,0,0 0 0 0 0 0 0 0 0 0 0 0 human,macaque,orangutan,rabbit, lincRNA lincRNA A549@0.0039195,AG04450@0,BJ@0,GM12878@0.027816,H1HESC@0.007858,HELAS3@0,HEPG2@0.0332935,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0.06655, 21 4 14 4 ENSG00000224267.1 ENST00000431077.1 chr9:68324611-68340644 3 344 15685 intergenic 9.74 1 0,0,0 0 0,0,0 0 0 0 0 0 0 156.401162790698 1.61778769525024 27.347 0 0 chimp,cow,dog,horse,human,macaque,marmoset,opossum,orangutan,panda, processed_transcript processed_transcript A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 53 3 32 3 ENSG00000225411.1 ENST00000417843.1 chr9:68397878-68401759 3 2815 1062 intergenic 5.35 0 0,0,0 0 0,0,0 0 0 0 0 0 0 0 0 0 0 0 chimp,human,orangutan, lincRNA processed_transcript A549@0.059338,AG04450@0.164224,BJ@0.061553,GM12878@0.901574,H1HESC@0.01002,HELAS3@0.139588,HEPG2@0.148717,HMEC@0.274391,HSMM@0.0168515,HUVEC@0.037232,K562@0.68772,MCF7@0.522031,NHEK@0.100353,NHLF@0.0351125,SKNSHRA@0.860444, 0 0 0 0 ENSG00000203508.2 ENST00000366322.2 chr9:68408723-68414761 2 4223 1813 intergenic 4.03 0 0,1,0 0 0,0,0 0 0 0 0 0 0 0 7.61445118587976 0 0 1 chimp,human,orangutan, lincRNA lincRNA A549@0.10535,AG04450@0.377353,BJ@0.327282,GM12878@1.0483,H1HESC@0.017572,HELAS3@0.180145,HEPG2@0.164037,HMEC@0.242398,HSMM@0.18985,HUVEC@0.586835,K562@0.265027,MCF7@1.13699,NHEK@0.299034,NHLF@0.359608,SKNSHRA@3.21078, 0 0 0 0 ENSG00000255999.1 ENST00000416011.2 chr9:68808991-68811672 2 673 2006 intergenic 5.63 0 0,0,0 0 0,0,0 0 0 0 0 120.752243270189 11.242 0 158.439680957129 13.33 0 0 chimp,human,macaque,marmoset,rabbit, lincRNA lincRNA A549@0.0632545,AG04450@0.636281,BJ@0.0611955,GM12878@0.375493,H1HESC@0,HELAS3@0.0123675,HEPG2@0,HMEC@0.018198,HSMM@0.1384,HUVEC@0.0168285,K562@0.007933,MCF7@0,NHEK@0.01525,NHLF@0.617766,SKNSHRA@0.125036, 12 5 79 2 ENSG00000231242.1 ENST00000412376.1 chr9:69082536-69108793 7 2026 24219 intergenic -1.48 0 0,0,0 0 0,0,0 7.95656465942744 0.522234609191131 0 34.6431391905232 14.9568933481977 29.796 49.436327739388 18.4074899872001 51.392 0 0 cat,chimp,cow,dog,guinea_pig,horse,human,macaque,marmoset,mouse,opossum,orangutan,panda,pig,rabbit,rat, lincRNA processed_transcript A549@0.150009,AG04450@2.64577,BJ@0.350724,GM12878@1.7395,H1HESC@0.0036515,HELAS3@0.0064985,HEPG2@0.0111945,HMEC@0.060422,HSMM@0.287168,HUVEC@0.558979,K562@0.085532,MCF7@0.04286,NHEK@0.324598,NHLF@0.176765,SKNSHRA@0.270954, 0 0 0 0 ENSG00000237543.1 ENST00000416700.1 chr9:69146939-69149621 2 679 2001 intergenic 5.63 0 0,0,0 0 0,0,0 0 0 0 0 132.530734632684 7.312 2.2179675994109 156.743128435782 11.653 0 0 chimp,human,macaque,marmoset,panda,rabbit, lincRNA processed_transcript A549@0.04967,AG04450@0.566347,BJ@0.0285015,GM12878@0.241816,H1HESC@0,HELAS3@0.0043605,HEPG2@0,HMEC@0.036076,HSMM@0.205722,HUVEC@0.037686,K562@0.005085,MCF7@0,NHEK@0.025202,NHLF@0.729956,SKNSHRA@0.148757, 12 5 79 2 ENSG00000237543.1 ENST00000421142.1 chr9:69146964-69149621 2 534 2121 intergenic -1.49 0 0,0,0 0 0,0,0 0 0 0 0 125.032531824611 5.208 0 148.58510136728 8.953 0 0 chimp,human,macaque,marmoset,rabbit, lincRNA processed_transcript A549@0.04967,AG04450@0.566347,BJ@0.0285015,GM12878@0.241816,H1HESC@0,HELAS3@0.0043605,HEPG2@0,HMEC@0.036076,HSMM@0.205722,HUVEC@0.037686,K562@0.005085,MCF7@0,NHEK@0.025202,NHLF@0.729956,SKNSHRA@0.148757, 0 0 17 4 ENSG00000255706.1 ENST00000537313.1 chr9:69875392-69880438 3 2536 2506 intergenic 1.43 0 0,1,1 0 0,0,0 0 0 0 0 0 0 104.656545741325 6.75658419792498 0 0 1 chimp,human,macaque,orangutan, lincRNA lincRNA A549@0,AG04450@0.006996,BJ@0,GM12878@0.026822,H1HESC@0,HELAS3@0,HEPG2@0.002571,HMEC@0,HSMM@0,HUVEC@0.0165185,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0.006356, 0 0 0 0 ENSG00000227003.2 ENST00000436889.2 chr9:70645650-70648248 2 2546 50 intergenic 11.13 0 0,1,0 0 0,0,0 0 0 0 0 0 0 0 0 0 0 1 chimp,human, lincRNA lincRNA A549@1.84228,AG04450@0.300376,BJ@0.627692,GM12878@1.50279,H1HESC@0.421892,HELAS3@1.54709,HEPG2@1.48008,HMEC@0.504107,HSMM@0.186783,HUVEC@2.45587,K562@0.876092,MCF7@2.14487,NHEK@0.617441,NHLF@0.365471,SKNSHRA@0.923183, 0 0 0 0 ENSG00000226904.1 ENST00000425587.1 chr9:70843567-70844228 2 338 321 intergenic -11.96 0 0,0,0 0 0,0,0 0 0 0 0 0 4.541 15.8165680473373 0 4.769 0 0 cat,cow,dog,guinea_pig,horse,human,macaque,marmoset,mouse,orangutan,panda,pig, antisense antisense A549@0.036519,AG04450@0.08843,BJ@0.047506,GM12878@0.53407,H1HESC@0.0061015,HELAS3@0.0412445,HEPG2@0.0705025,HMEC@0.259523,HSMM@0.006052,HUVEC@0.059515,K562@0,MCF7@0.981935,NHEK@2.13812,NHLF@0,SKNSHRA@1.08116, 0 0 0 0 ENSG00000225337.1 ENST00000419576.1 chr9:70922309-70923361 2 414 636 intergenic -1.07 0 0,1,0 0 0,0,0 0 0 0 0 0 0 5.28260869565217 0 0 0 0 chimp,horse,human,macaque,marmoset,orangutan,panda,pig, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0.01915,H1HESC@0,HELAS3@0,HEPG2@0.00523,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0.033738,NHEK@0.0166267,NHLF@0,SKNSHRA@0, 179 2 116 2 ENSG00000234394.1 ENST00000429953.1 chr9:70943400-70945344 3 576 1364 intergenic -2.65 0 0,0,0 0 0,0,0 0 28.658357771261 62.33 0 13.6774193548387 0 0 14.5205278592375 0 0 0 chimp,human,orangutan, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0.0035535,HUVEC@0,K562@0.021035,MCF7@0.0066645,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000234394.1 ENST00000414223.1 chr9:70943496-70945547 2 615 1434 intergenic -6.03 0 0,1,0 0 0,0,0 0 27.2594142259414 62.33 0 13.0097629009763 0 0 13.8117154811715 0 0 0 chimp,human,macaque,marmoset,orangutan, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0.0035535,HUVEC@0,K562@0.021035,MCF7@0.0066645,NHEK@0,NHLF@0,SKNSHRA@0, 45 3 0 0 ENSG00000224958.1 ENST00000420855.1 chr9:70970105-70972736 3 569 2058 intronic -2.18 1 0,0,0 0 0,0,0 0 64.0481049562682 22.26 0 130.427113702624 13.01 5.72231985940246 160.022837706511 15.611 0 0 chimp,human,macaque,marmoset,rabbit, lincRNA processed_transcript A549@0.003968,AG04450@0.0211115,BJ@0.010965,GM12878@0.0133945,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0.030076,HUVEC@0,K562@0.004983,MCF7@0.0148685,NHEK@0,NHLF@0.30026,SKNSHRA@0.008303, 12 5 17 4 ENSG00000224958.1 ENST00000417887.1 chr9:70970105-70972768 2 545 2116 intronic -2.40 1 0,0,0 0 0,0,0 0 62.2925330812854 22.26 0 126.852079395085 13.01 0 157.367674858223 15.611 0 0 chimp,human,macaque,marmoset,rabbit, lincRNA processed_transcript A549@0.003968,AG04450@0.0211115,BJ@0.010965,GM12878@0.0133945,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0.030076,HUVEC@0,K562@0.004983,MCF7@0.0148685,NHEK@0,NHLF@0.30026,SKNSHRA@0.008303, 0 0 0 0 ENSG00000233178.1 ENST00000446984.1 chr9:71012849-71014187 2 421 915 intronic -1.00 0 0,0,0 0 0,0,0 141.688836104513 0 0 55.8194774346793 0 0 55.4940617577197 0 0 0 0 chimp,guinea_pig,human,marmoset,orangutan,pig, antisense antisense A549@0.189307,AG04450@0.0906855,BJ@0.023182,GM12878@0.211347,H1HESC@0.03716,HELAS3@0.0260095,HEPG2@0.036005,HMEC@0.01936,HSMM@0.030235,HUVEC@0.031255,K562@0.369983,MCF7@0.03867,NHEK@0.197464,NHLF@0.027369,SKNSHRA@0.08705, 0 0 0 0 ENSG00000229019.1 ENST00000434656.1 chr9:71041759-71044285 2 903 1621 intronic -2.23 0 0,0,0 0 0,0,0 50.1949058693245 46.8229487970389 0 45.3709856035437 46.0641579272054 12.308 54.578073089701 54.8266502159161 20.43 0 0 chimp,cow,dog,elephant,guinea_pig,horse,human,macaque,marmoset,mouse,orangutan,pig,rabbit, sense_intronic sense_intronic A549@0,AG04450@0,BJ@0.0191965,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0.040262,HUVEC@0,K562@0,MCF7@0.0272645,NHEK@0,NHLF@0.0235345,SKNSHRA@0, 0 0 0 0 ENSG00000226337.2 ENST00000413269.2 chr9:71155952-71248176 4 885 91333 intergenic 4.01 0 0,1,0 0 0,0,0 1.41694915254237 3.00626279657955 51.482 4.01016949152542 3.4727316523053 81.858 4.43841807909605 29.0536169840036 92.332 0 0 chimp,dog,elephant,horse,human,macaque,marmoset,orangutan,panda,pig,rabbit, processed_transcript processed_transcript A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000234506.1 ENST00000432148.1 chr9:71158457-71161032 4 491 2078 intergenic 2.79 0 0,0,1 0 0,0,0 0 0 49.12 0 0 59.577 0 0 63.475 0 0 chimp,human,macaque,marmoset,orangutan, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0.006935,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000234506.1 ENST00000446290.1 chr9:71158457-71161505 4 334 2708 intergenic 2.79 0 1,1,1 0 0,0,0 0 4.7562776957164 36.24 0 0.960487444608567 56.976 0 2.45420974889217 56.829 0 0 chimp,human,macaque,marmoset,orangutan,pig, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0.006935,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000236733.1 ENST00000442103.1 chr9:71437319-71458191 3 513 20355 exonic -1.66 0 0,0,1 0 0,0,0 22.2456140350877 11.7666421026775 7.36 35.859649122807 8.79145173176124 26.44 36.8421052631579 10.3790714812086 26.834 0 0 cat,chimp,cow,dog,guinea_pig,horse,human,macaque,marmoset,orangutan,rabbit, antisense antisense A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000243888.1 ENST00000457328.1 chr9:72043164-72043637 2 396 75 intergenic -7.68 0 0,0,0 0 0,0,1 19.4141414141414 0 0 50.8484848484848 0 1.673 50 40 0 0 0 cat,chimp,dog,elephant,guinea_pig,horse,human,macaque,marmoset,mouse,orangutan,panda,pig,rat, lincRNA lincRNA A549@0.524169,AG04450@2.35383,BJ@2.0707,GM12878@0.2195,H1HESC@0.427409,HELAS3@0,HEPG2@0,HMEC@0.246912,HSMM@3.09747,HUVEC@5.1055,K562@0,MCF7@1.03237,NHEK@0.791951,NHLF@7.3503,SKNSHRA@1.27343, 0 0 0 0 ENSG00000229312.1 ENST00000429567.1 chr9:72087382-72109429 3 440 21603 intronic 1.42 0 0,0,0 0 0,0,0 0 4.37823450446697 72.141 0 8.77424431791881 54.08 0 7.95023839281581 62.799 0 0 cat,chimp,cow,dog,horse,human,macaque,marmoset,orangutan,panda,pig, antisense antisense A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0.178847,NHEK@0.017684,NHLF@0,SKNSHRA@0.030747, 0 0 0 0 ENSG00000225626.2 ENST00000439418.1 chr9:72433899-72435655 2 1373 381 intergenic -7.47 0 0,1,0 0 0,0,0 0 0 12.19 11.7232337946103 0 49.864 12.1383831026948 0 54.797 0 0 chimp,human,orangutan, lincRNA processed_transcript A549@0.004863,AG04450@0,BJ@0,GM12878@0,H1HESC@0.024668,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0.00503033,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000225626.2 ENST00000453410.1 chr9:72434321-72435583 2 973 287 intergenic -7.47 1 0,1,0 0 0,0,0 0 0 12.19 0 0 55.678 0 0 60.971 0 0 chimp,human,marmoset,orangutan,panda, lincRNA processed_transcript A549@0.004863,AG04450@0,BJ@0,GM12878@0,H1HESC@0.024668,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0.00503033,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000225626.2 ENST00000526458.1 chr9:72434743-72435599 2 566 288 intergenic 0.28 0 0,1,1 0 0,0,0 0 0 12.19 3.42402826855124 0 53.417 3.63604240282686 0 58.57 1 1 chimp,human,macaque,marmoset,orangutan, lincRNA processed_transcript A549@0.004863,AG04450@0,BJ@0,GM12878@0,H1HESC@0.024668,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0.00503033,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000237778.1 ENST00000414515.1 chr9:72702213-72728782 3 619 25946 intronic 4.08 0 0,0,0 0 0,0,0 13.0048465266559 13.5888768981731 0 0 16.4704386032529 0 14.6445880452342 15.4831958683419 3.402 0 0 chimp,elephant,human,macaque,marmoset,orangutan,panda,rabbit, antisense antisense A549@0,AG04450@0.0865185,BJ@0.0326395,GM12878@0.013172,H1HESC@0.014037,HELAS3@0.026843,HEPG2@0.19461,HMEC@0,HSMM@0.184612,HUVEC@0,K562@0.031578,MCF7@0,NHEK@0.0402517,NHLF@0.003102,SKNSHRA@0.016627, 0 0 0 0 ENSG00000204706.6 ENST00000451488.1 chr9:72768050-72772456 3 314 4088 intronic -12.42 1 0,0,1 0 0,0,0 0 2.04500978473581 0 0 4.81115459882583 0 3.19745222929936 6.36399217221135 0 0 0 cat,chimp,cow,dog,elephant,human,macaque,marmoset,orangutan,panda,pig, antisense antisense A549@0.017286,AG04450@0.066799,BJ@0.12344,GM12878@0.021558,H1HESC@0.085751,HELAS3@0.11719,HEPG2@0.230896,HMEC@0.004522,HSMM@0.015184,HUVEC@0.074082,K562@0.038968,MCF7@0.17557,NHEK@0.041484,NHLF@0.0106115,SKNSHRA@0.0966705, 0 0 0 0 ENSG00000204706.6 ENST00000377178.3 chr9:72768050-72790748 4 1500 21192 intronic 2.00 1 0,0,1 0 0,0,0 13.2693333333333 14.0105228388071 104.807 3.79266666666667 17.8954794261986 9.546 3.10133333333333 20.4690449226123 4.131 0 0 chimp,cow,dog,elephant,guinea_pig,horse,human,macaque,marmoset,orangutan,panda,pig,rabbit, antisense antisense A549@0.017286,AG04450@0.066799,BJ@0.12344,GM12878@0.021558,H1HESC@0.085751,HELAS3@0.11719,HEPG2@0.230896,HMEC@0.004522,HSMM@0.015184,HUVEC@0.074082,K562@0.038968,MCF7@0.17557,NHEK@0.041484,NHLF@0.0106115,SKNSHRA@0.0966705, 0 0 0 0 ENSG00000204706.6 ENST00000535188.1 chr9:72784559-72787804 2 1809 1434 exonic 1.07 0 0,0,1 0 0,0,0 32.4444444444444 0 0 61.0398009950249 0 0 53.5124378109453 0 0 0 0 cat,chimp,cow,dog,guinea_pig,horse,human,macaque,marmoset,orangutan,panda,rabbit,rat, antisense antisense A549@0.017286,AG04450@0.066799,BJ@0.12344,GM12878@0.021558,H1HESC@0.085751,HELAS3@0.11719,HEPG2@0.230896,HMEC@0.004522,HSMM@0.015184,HUVEC@0.074082,K562@0.038968,MCF7@0.17557,NHEK@0.041484,NHLF@0.0106115,SKNSHRA@0.0966705, 0 0 0 0 ENSG00000204706.6 ENST00000448377.2 chr9:72784559-72790804 3 1919 4322 exonic 1.07 0 0,0,1 0 0,0,0 50.0323084940073 9.97686256362795 87.391 57.5409067222512 22.4493290143452 9.546 50.4450234497134 23.9023600185099 4.131 0 0 cat,chimp,cow,dog,guinea_pig,horse,human,macaque,marmoset,orangutan,panda,rabbit,rat, antisense antisense A549@0.017286,AG04450@0.066799,BJ@0.12344,GM12878@0.021558,H1HESC@0.085751,HELAS3@0.11719,HEPG2@0.230896,HMEC@0.004522,HSMM@0.015184,HUVEC@0.074082,K562@0.038968,MCF7@0.17557,NHEK@0.041484,NHLF@0.0106115,SKNSHRA@0.0966705, 0 0 0 0 ENSG00000204706.6 ENST00000420573.1 chr9:72786915-72787683 2 337 429 intronic -0.87 0 0,0,1 0 0,0,0 0 0 0 0 0 0 0 0 0 0 0 cat,chimp,cow,dog,guinea_pig,horse,human,macaque,orangutan,panda,pig,rabbit, antisense antisense A549@0.017286,AG04450@0.066799,BJ@0.12344,GM12878@0.021558,H1HESC@0.085751,HELAS3@0.11719,HEPG2@0.230896,HMEC@0.004522,HSMM@0.015184,HUVEC@0.074082,K562@0.038968,MCF7@0.17557,NHEK@0.041484,NHLF@0.0106115,SKNSHRA@0.0966705, 0 0 0 0 ENSG00000232086.1 ENST00000436491.1 chr9:73322963-73327779 2 335 4479 intronic -4.49 0 0,0,0 0 0,0,0 0 0 0 0 4.76713552132172 4.08 0 7.41348515293592 0 0 0 chimp,guinea_pig,horse,human,macaque,marmoset,orangutan,panda, antisense antisense A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 188 2 121 2 ENSG00000223966.1 ENST00000415119.1 chr9:73340956-73345772 2 335 4479 intronic -4.49 0 0,0,0 0 0,0,0 0 0 0 0 5.91560616208975 17.15 6.52835820895522 11.2991739227506 25.927 0 0 chimp,guinea_pig,horse,human,macaque,marmoset,orangutan,panda, antisense antisense A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 188 2 121 2 ENSG00000244846.1 ENST00000500555.1 chr9:74381169-74383463 2 2237 55 exonic 4.39 0 0,0,1 0 0,0,0 45.1385784532857 0 0 39.5569959767546 292.363636363636 0 41.90970049173 64.2 0 0 0 chimp,cow,elephant,horse,human,macaque,marmoset,orangutan,pig, lincRNA lincRNA A549@0.0049345,AG04450@0.0028805,BJ@0,GM12878@0,H1HESC@0.0025995,HELAS3@0.0101355,HEPG2@0,HMEC@0,HSMM@0.001838,HUVEC@0,K562@0,MCF7@0,NHEK@0.00174033,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000235523.1 ENST00000427901.1 chr9:74872252-74872699 2 359 86 intergenic -5.51 0 0,0,0 0 0,0,0 0 0 0 0 0 0 0 0 2.35 0 0 chimp,horse,human,macaque,orangutan, lincRNA lincRNA A549@0,AG04450@0.0151405,BJ@0,GM12878@0.167526,H1HESC@0,HELAS3@1.22029,HEPG2@0.699249,HMEC@0,HSMM@0,HUVEC@0,K562@0.0222495,MCF7@0,NHEK@0.00731433,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000225434.1 ENST00000451596.1 chr9:74920345-74930380 2 670 9363 intergenic -0.95 1 1,1,1 1 0,0,0 88.3343283582089 2.69945530278757 0 44.5373134328358 5.53326925130834 0 46.7044776119403 9.10915304923636 0 0 0 cat,chimp,cow,dog,horse,human,macaque,marmoset,orangutan,panda,pig,rabbit, lincRNA processed_transcript A549@1.70883,AG04450@0.0084105,BJ@0.0036635,GM12878@0,H1HESC@0.0187485,HELAS3@0.034253,HEPG2@0.008426,HMEC@0.00197,HSMM@0,HUVEC@0.078025,K562@0,MCF7@0.0199705,NHEK@0.0213757,NHLF@0.475151,SKNSHRA@0.0719545, 0 0 0 0 ENSG00000225434.1 ENST00000436054.1 chr9:74920352-74958126 5 2073 35693 intergenic -5.74 0 0,1,0 1 0,0,0 0 7.66049365421791 0 1.03762662807525 8.7558905107444 0 4.32947419199228 10.3305410024375 0 0 0 cat,chimp,dog,human,macaque,orangutan,panda, lincRNA processed_transcript A549@1.70883,AG04450@0.0084105,BJ@0.0036635,GM12878@0,H1HESC@0.0187485,HELAS3@0.034253,HEPG2@0.008426,HMEC@0.00197,HSMM@0,HUVEC@0.078025,K562@0,MCF7@0.0199705,NHEK@0.0213757,NHLF@0.475151,SKNSHRA@0.0719545, 0 0 0 0 ENSG00000225434.1 ENST00000451152.1 chr9:74920433-74930380 2 586 9359 intergenic -0.95 1 1,1,1 1 0,0,0 100.996587030717 2.70060903942729 0 50.9215017064846 5.53563414894754 0 53.3993174061433 9.11304626562667 0 0 0 cat,chimp,cow,dog,elephant,horse,human,macaque,marmoset,orangutan,panda,pig,rabbit, lincRNA processed_transcript A549@1.70883,AG04450@0.0084105,BJ@0.0036635,GM12878@0,H1HESC@0.0187485,HELAS3@0.034253,HEPG2@0.008426,HMEC@0.00197,HSMM@0,HUVEC@0.078025,K562@0,MCF7@0.0199705,NHEK@0.0213757,NHLF@0.475151,SKNSHRA@0.0719545, 0 0 0 0 ENSG00000236849.1 ENST00000423171.1 chr9:75486644-75488984 4 590 1744 intergenic -1.03 1 1,1,1 0 0,0,0 39.4576271186441 3.71502293577982 0 28.0169491525424 2.01204128440367 1.434 36.4915254237288 3.54071100917431 1.506 0 0 cat,chimp,cow,dog,elephant,guinea_pig,human,macaque,marmoset,orangutan,pig,rabbit, lincRNA lincRNA A549@0.308212,AG04450@0,BJ@0.0312355,GM12878@0.015296,H1HESC@0,HELAS3@0,HEPG2@0.0367005,HMEC@0,HSMM@0.109385,HUVEC@0.0296065,K562@0.0039825,MCF7@0,NHEK@0,NHLF@0.0066565,SKNSHRA@0.0075105, 0 0 0 0 ENSG00000236849.1 ENST00000449235.1 chr9:75486644-75489014 4 624 1740 intergenic -1.03 1 1,1,1 0 0,0,0 37.3076923076923 3.7235632183908 0 28.5352564102564 1.28333333333333 1.434 36.5865384615385 2.80172413793103 1.506 0 0 cat,chimp,cow,dog,elephant,guinea_pig,human,macaque,marmoset,orangutan,pig,rabbit, lincRNA lincRNA A549@0.308212,AG04450@0,BJ@0.0312355,GM12878@0.015296,H1HESC@0,HELAS3@0,HEPG2@0.0367005,HMEC@0,HSMM@0.109385,HUVEC@0.0296065,K562@0.0039825,MCF7@0,NHEK@0,NHLF@0.0066565,SKNSHRA@0.0075105, 0 0 0 0 ENSG00000236849.1 ENST00000453787.1 chr9:75486644-75489025 4 579 1796 intergenic -4.80 1 1,1,1 0 0,0,0 40.2072538860104 3.60746102449889 0 28.5492227979275 1.95378619153675 1.434 37.1848013816926 3.43819599109131 1.506 0 0 cat,chimp,cow,dog,elephant,guinea_pig,horse,human,macaque,marmoset,orangutan,pig,rabbit, lincRNA lincRNA A549@0.308212,AG04450@0,BJ@0.0312355,GM12878@0.015296,H1HESC@0,HELAS3@0,HEPG2@0.0367005,HMEC@0,HSMM@0.109385,HUVEC@0.0296065,K562@0.0039825,MCF7@0,NHEK@0,NHLF@0.0066565,SKNSHRA@0.0075105, 0 0 0 0 ENSG00000232590.1 ENST00000422909.1 chr9:76188531-76194414 3 621 5258 intergenic 0.07 0 0,0,1 0 0,0,0 351.980676328502 200.642449600609 360.702 325.186795491143 113.706542411563 313.729 316.206119162641 136.018448079118 342.328 0 0 cat,chimp,cow,dog,elephant,guinea_pig,horse,human,macaque,marmoset,mouse,opossum,orangutan,panda,pig,platypus,rabbit, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000227809.1 ENST00000423681.1 chr9:76986447-76998446 3 645 11350 intergenic 3.30 0 0,0,1 0 0,0,0 0 43.8032599118943 143.748 0 43.3862555066079 31.732 0 44.7727753303965 37.706 0 0 chimp,cow,human,macaque,marmoset,orangutan, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000224825.1 ENST00000417576.1 chr9:77100467-77114043 3 1174 12398 intronic -5.95 0 0,1,0 0 0,0,0 0 56.2440716244556 0 2.75468483816014 50.9079690272625 2.728 4.34838160136286 51.2571382481045 3.108 0 0 chimp,dog,elephant,horse,human,macaque,marmoset,orangutan,panda,rabbit, antisense antisense A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0.912624,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0.0049735,SKNSHRA@0.554536, 0 0 0 0 ENSG00000203321.2 ENST00000455609.1 chr9:77567884-77611209 5 714 42603 intronic -1.35 0 0,1,0 1 0,0,0 17.2843137254902 25.3879773724855 38.458 23.1316526610644 17.4769617163111 69.786 22.3389355742297 16.2782433161984 70.188 0 0 chimp,elephant,human,macaque,orangutan, lincRNA processed_transcript A549@0.0073365,AG04450@0.0164695,BJ@0.0333675,GM12878@0.051798,H1HESC@0.007575,HELAS3@0.051262,HEPG2@0.026983,HMEC@0.017085,HSMM@0.0031705,HUVEC@0,K562@0.0681245,MCF7@0.0224965,NHEK@0.00177533,NHLF@0.002714,SKNSHRA@0.0593725, 0 0 0 0 ENSG00000229587.1 ENST00000455336.1 chr9:77624744-77630953 2 669 5538 intronic -5.77 0 0,1,1 0 0,0,0 0 0 276.163 5.65022421524664 1.73835319609967 155.558 4.75336322869955 1.9440231130372 172.696 0 0 chimp,human,macaque,marmoset,orangutan, sense_intronic sense_intronic A549@0.218158,AG04450@0.0493,BJ@0.192695,GM12878@0.318134,H1HESC@0.0729785,HELAS3@0.399755,HEPG2@0.49088,HMEC@0,HSMM@0,HUVEC@0.103412,K562@0.199345,MCF7@0.0113,NHEK@0.0869703,NHLF@0.100268,SKNSHRA@0.118107, 0 0 0 0 ENSG00000236376.1 ENST00000455583.1 chr9:78194585-78203464 2 456 8421 intergenic -3.81 0 0,0,1 0 0,0,0 0 4.08740054625341 0 10.3333333333333 3.53057831611448 0 10.7916666666667 6.47001543759649 0 0 0 chimp,dog,horse,human,macaque,marmoset,orangutan,panda, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0.017758,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000225937.1 ENST00000412654.1 chr9:79379352-79402485 4 3918 19209 intronic -0.33 0 0,1,1 0 0,0,0 52.0015313935682 11.9982820552866 0 63.1750893312915 14.0098391379041 0 65.8448187850944 14.9139986464678 0 0 0 cat,chimp,dog,guinea_pig,horse,human,macaque,marmoset,orangutan,panda,pig, antisense antisense A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0.0347595,HUVEC@0.00248,K562@0.0012525,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000232998.1 ENST00000415172.1 chr9:79791672-79792910 2 517 719 exonic 1.79 0 0,1,0 0 0,0,0 74.0870406189555 0 1.984 116.860735009671 10.6981919332406 8.4 130.862669245648 12.5424200278164 8.376 0 0 cat,chimp,cow,dog,elephant,guinea_pig,human,macaque,marmoset,orangutan,panda,pig, antisense antisense A549@0.006498,AG04450@0.0159455,BJ@0.0046625,GM12878@0.0129165,H1HESC@0.016941,HELAS3@0,HEPG2@0.0390015,HMEC@0,HSMM@0,HUVEC@0.005734,K562@0,MCF7@0.0077475,NHEK@0.00444233,NHLF@0,SKNSHRA@0.004379, 0 0 0 0 ENSG00000231373.1 ENST00000439145.1 chr9:80071211-80141613 4 601 69795 intronic 0 0 0,0,1 0 0,0,0 0 3.4367791389068 0 0 6.12479403968766 0 0 7.2247725481768 0 0 0 cat,chimp,dog,horse,human,macaque,marmoset,orangutan,panda,pig, antisense antisense A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000233086.1 ENST00000424980.1 chr9:82120719-82147257 2 326 26210 intergenic 1.58 1 0,0,0 0 0,0,0 0 1.95143075162152 0 22.5858895705521 9.30137352155666 10.034 22.9110429447853 10.1179702403663 7.027 0 0 cat,chimp,cow,dog,elephant,horse,human,macaque,marmoset,mouse,orangutan,pig,rabbit,rat, lincRNA lincRNA A549@0,AG04450@0.004217,BJ@0.003447,GM12878@0.0095495,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0.002931,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000233086.1 ENST00000413352.1 chr9:82132788-82147257 2 700 13767 intergenic -2.11 1 0,0,0 0 0,0,0 0 2.53468439020847 0 10.3328571428571 13.2634560906516 10.034 13.8771428571429 12.820004358248 7.027 0 0 cat,chimp,dog,elephant,horse,human,macaque,marmoset,orangutan,panda,rabbit, lincRNA lincRNA A549@0,AG04450@0.004217,BJ@0.003447,GM12878@0.0095495,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0.002931,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000232494.1 ENST00000448475.1 chr9:82489611-82501593 2 522 11458 intergenic -0.56 0 0,1,0 0 0,0,0 0 1.036830162332 0 0 3.10673765054983 0 0 3.88313841857218 0 0 0 chimp,cow,dog,elephant,guinea_pig,horse,human,macaque,marmoset,orangutan,panda,pig,rabbit, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000230945.1 ENST00000417801.1 chr9:82645494-82649470 2 444 3530 intergenic -5.29 0 0,0,0 0 0,0,0 0 0 0 0 0 0 3.83108108108108 0 0 0 0 chimp,cow,horse,human,macaque,marmoset,orangutan, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000226798.1 ENST00000397864.2 chr9:83484673-83486210 3 788 745 intergenic 1.81 0 0,0,0 0 0,0,0 0 0 52.44 0 0 99.491 0 0 136.869 0 0 chimp,elephant,horse,human,marmoset,orangutan,pig, lincRNA lincRNA A549@0,AG04450@0.0029775,BJ@0,GM12878@0.005097,H1HESC@0.017495,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0.0161685,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0.00862, 0 0 0 0 ENSG00000233926.1 ENST00000437181.1 chr9:84304628-84391815 4 1445 85736 intergenic 2.06 1 0,0,0 0 0,0,0 50.2615916955017 24.2878254175609 74.856 64.4608996539792 23.2856326397313 152.508 69.8643598615917 24.9505341980032 128.492 0 0 chimp,human,macaque,marmoset,orangutan, lincRNA processed_transcript A549@0.0334285,AG04450@0.0117805,BJ@0.0111665,GM12878@0,H1HESC@0.023639,HELAS3@0.008642,HEPG2@0.018893,HMEC@0,HSMM@0.00142,HUVEC@0,K562@0,MCF7@0.0051395,NHEK@0.00232933,NHLF@0,SKNSHRA@0.006263, 0 0 0 0 ENSG00000233926.1 ENST00000413050.1 chr9:84362858-84370367 2 546 6961 intergenic -3.71 0 0,1,0 0 0,0,0 105.113553113553 12.3671886223244 5.908 106.379120879121 13.7333716420055 12.572 103.386446886447 14.2957908346502 12.901 0 0 chimp,dog,human,macaque,marmoset,orangutan,rabbit, lincRNA processed_transcript A549@0.0334285,AG04450@0.0117805,BJ@0.0111665,GM12878@0,H1HESC@0.023639,HELAS3@0.008642,HEPG2@0.018893,HMEC@0,HSMM@0.00142,HUVEC@0,K562@0,MCF7@0.0051395,NHEK@0.00232933,NHLF@0,SKNSHRA@0.006263, 0 0 0 0 ENSG00000230846.1 ENST00000427387.1 chr9:84542936-84546283 2 463 2882 intergenic 3.94 0 0,0,0 0 0,0,0 0 0 0 0 0 0 0 0 0 0 0 chimp,elephant,human,macaque,marmoset,orangutan,rabbit, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000228430.1 ENST00000457558.1 chr9:84888321-85043202 5 389 154484 intergenic -2.25 0 0,0,0 0 0,0,0 49.0745501285347 35.6286929390746 0 128.992287917738 35.3098702778281 0 162.699228791774 40.2885476813133 0 0 0 cat,chimp,cow,dog,elephant,guinea_pig,horse,human,macaque,marmoset,mouse,orangutan,pig,rabbit,rat, lincRNA lincRNA A549@0.0070105,AG04450@0.0059775,BJ@0,GM12878@0.0051165,H1HESC@0.005265,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0.020502,K562@0,MCF7@0,NHEK@0.0123303,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000225085.1 ENST00000436084.1 chr9:85020103-85021154 2 453 596 intergenic -7.02 0 0,0,1 0 0,0,0 51.0971302428256 31.4630872483221 82.994 27.4437086092715 1.81208053691275 52.279 29.158940397351 1.3993288590604 66.283 0 0 cat,chimp,dog,elephant,guinea_pig,horse,human,macaque,marmoset,orangutan,panda,rabbit, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000232749.1 ENST00000422010.1 chr9:85068260-85070140 3 596 1280 intergenic -0.39 0 0,0,1 0 0,0,0 0 86.453125 0 14.4244966442953 340.5875 2.39 22.9312080536913 392.953125 4.144 0 0 cat,chimp,cow,dog,guinea_pig,horse,human,macaque,marmoset,orangutan,panda,rabbit, lincRNA lincRNA A549@0,AG04450@0.0078635,BJ@0,GM12878@0.0088665,H1HESC@0,HELAS3@0,HEPG2@0.0036325,HMEC@0.013672,HSMM@0.00687,HUVEC@0,K562@0,MCF7@0,NHEK@0.0218947,NHLF@0,SKNSHRA@0.0179615, 0 0 0 0 ENSG00000229109.1 ENST00000416473.1 chr9:85834246-85849157 3 441 14466 intergenic 2.40 0 0,1,0 1 0,0,0 0 0 0 5.96145124716553 1.16535324208489 0 6.82993197278912 1.20634591455827 0.94 0 0 cat,chimp,cow,horse,human,macaque,marmoset,orangutan,panda,pig, antisense antisense A549@0.116081,AG04450@0.005048,BJ@0.014577,GM12878@0,H1HESC@0.078998,HELAS3@0.064783,HEPG2@0.08332,HMEC@0,HSMM@0,HUVEC@0.450145,K562@0.0110635,MCF7@0.10566,NHEK@0.0329273,NHLF@0,SKNSHRA@0.210253, 0 0 0 0 ENSG00000237529.1 ENST00000458111.1 chr9:85891291-85894414 2 525 2596 intronic 1.52 0 0,0,1 0 0,0,0 0 0 0 6.61333333333333 0.764252696456086 5.665 7.25333333333333 0.773497688751926 13.689 0 0 cat,chimp,cow,dog,guinea_pig,horse,human,macaque,marmoset,orangutan,panda, antisense antisense A549@0.039685,AG04450@0.008506,BJ@0,GM12878@0,H1HESC@0.0039365,HELAS3@0.0137585,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0.112671,K562@0.0098325,MCF7@0.0229765,NHEK@0.00501033,NHLF@0,SKNSHRA@0.056811, 0 0 0 0 ENSG00000254473.1 ENST00000524818.1 chr9:86322509-86327784 2 487 4786 exonic 1.04 0 0,1,1 0 0,0,0 91.2279260780287 5.6136648558295 63.818 148.632443531828 15.8117425825324 84.678 145.535934291581 14.8058921855412 79.378 1 1 chimp,human,macaque,marmoset,orangutan, antisense antisense A549@0.631995,AG04450@0.496632,BJ@0.500046,GM12878@0.450982,H1HESC@0.110806,HELAS3@0.439481,HEPG2@0.183011,HMEC@0.483142,HSMM@0.603057,HUVEC@0.401501,K562@0.424478,MCF7@0.437779,NHEK@0.781538,NHLF@0.536498,SKNSHRA@0.611047, 0 0 0 0 ENSG00000254473.1 ENST00000531661.1 chr9:86323233-86328293 2 1015 4043 intergenic 9.39 0 0,1,0 1 0,0,0 0 0 128.979 0 0.441503833786792 212.418 0 0 202.684 1 1 chimp,human,macaque,marmoset,orangutan, antisense antisense A549@0.631995,AG04450@0.496632,BJ@0.500046,GM12878@0.450982,H1HESC@0.110806,HELAS3@0.439481,HEPG2@0.183011,HMEC@0.483142,HSMM@0.603057,HUVEC@0.401501,K562@0.424478,MCF7@0.437779,NHEK@0.781538,NHLF@0.536498,SKNSHRA@0.611047, 25 4 0 0 ENSG00000245608.1 ENST00000499139.1 chr9:86432881-86443087 6 901 9295 intergenic 0.54 0 0,1,0 0 0,0,0 48.2397336293008 3.68499193114578 143.802 60.5016648168701 9.22635825712749 156.392 67.5283018867924 12.4426035502959 103.068 0 0 chimp,horse,human,macaque,marmoset,orangutan,panda, lincRNA lincRNA A549@0,AG04450@0.006819,BJ@0,GM12878@0.012541,H1HESC@0.0364125,HELAS3@0.106313,HEPG2@0.028149,HMEC@0,HSMM@0,HUVEC@0,K562@0.0197005,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0.0080775, 0 0 0 0 ENSG00000226877.1 ENST00000458016.1 chr9:86444571-86452502 5 471 7452 exonic 4.27 0 0,0,0 0 0,0,0 0 3.11097691894793 0 95.8131634819533 9.42753623188406 17.021 126.653927813163 11.7478529253892 36.857 0 0 cat,chimp,cow,dog,elephant,guinea_pig,human,macaque,marmoset,opossum,orangutan, antisense antisense A549@0,AG04450@0,BJ@0.006839,GM12878@0,H1HESC@0,HELAS3@0.039543,HEPG2@0.015075,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0.00311367,NHLF@0,SKNSHRA@0.0116645, 0 0 0 0 ENSG00000226877.1 ENST00000439378.1 chr9:86446475-86452779 3 357 5943 exonic 4.27 0 0,0,0 0 0,0,0 0 3.90089180548545 0 65.6918767507003 13.7953895339054 8.178 103.697478991597 17.8980312973246 0 0 0 cat,chimp,cow,guinea_pig,horse,human,macaque,marmoset,mouse,opossum,orangutan,panda,rabbit, antisense antisense A549@0,AG04450@0,BJ@0.006839,GM12878@0,H1HESC@0,HELAS3@0.039543,HEPG2@0.015075,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0.00311367,NHLF@0,SKNSHRA@0.0116645, 0 0 0 0 ENSG00000226877.1 ENST00000417672.1 chr9:86446480-86452500 4 491 5523 exonic 4.14 0 0,0,0 0 0,0,0 13.6293279022403 2.94260365743255 0 90.8105906313646 10.9462248777838 8.178 120.338085539715 15.1904761904762 0 0 0 cat,chimp,cow,dog,elephant,guinea_pig,horse,human,macaque,marmoset,orangutan,panda, antisense antisense A549@0,AG04450@0,BJ@0.006839,GM12878@0,H1HESC@0,HELAS3@0.039543,HEPG2@0.015075,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0.00311367,NHLF@0,SKNSHRA@0.0116645, 0 0 0 0 ENSG00000226877.1 ENST00000412069.1 chr9:86451967-86452498 2 422 107 exonic 1.62 0 0,0,0 0 0,0,0 0 0 0 120.184834123223 22.0934579439252 23.292 164.661137440758 74.9065420560748 22.511 0 0 cat,chimp,cow,dog,elephant,guinea_pig,horse,human,macaque,marmoset,mouse,opossum,orangutan,panda,rabbit,rat, antisense antisense A549@0,AG04450@0,BJ@0.006839,GM12878@0,H1HESC@0,HELAS3@0.039543,HEPG2@0.015075,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0.00311367,NHLF@0,SKNSHRA@0.0116645, 175 2 113 2 ENSG00000231616.1 ENST00000421734.1 chr9:86473883-86482797 3 407 8503 exonic -0.31 0 0,0,0 0 0,0,0 240.056511056511 12.6687051628837 0 324.842751842752 11.9263789250853 4.14 408.891891891892 15.9286134305539 6.565 0 0 cat,chimp,cow,dog,elephant,guinea_pig,horse,human,macaque,marmoset,mouse,opossum,orangutan,panda,pig,rabbit,rat, antisense antisense A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0.00475167,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000235298.1 ENST00000448389.1 chr9:86587148-86590692 2 388 3154 exonic -2.63 0 0,1,1 0 0,0,0 733.216494845361 421.996195307546 234.769 801.484536082474 459.767913760304 300.999 816.556701030928 459.495878249841 305.694 0 0 cat,chimp,cow,dog,elephant,guinea_pig,horse,human,macaque,marmoset,mouse,opossum,orangutan,panda,platypus,rabbit,rat, antisense antisense A549@0.175946,AG04450@0.06463,BJ@0.018348,GM12878@0.0103375,H1HESC@0,HELAS3@0.0251975,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0.010544,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000227463.1 ENST00000423515.1 chr9:86690576-86697691 3 546 6565 intergenic -3.87 0 0,0,0 0 0,0,0 63.3553113553114 18.3247524752475 0 104.60989010989 31.7881188118812 0 105.514652014652 44.9523229246001 0 0 0 chimp,horse,human,macaque,mouse, processed_transcript processed_transcript A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000233262.1 ENST00000419815.1 chr9:86893134-86905046 2 371 11539 exonic 0.80 0 0,1,0 0 0,0,0 0 21.9971401334604 0 38.8194070080863 32.2465551607592 0 45.9622641509434 50.1478464338331 0.251 0 0 chimp,dog,guinea_pig,horse,human,macaque,marmoset,orangutan,panda,pig,rabbit, antisense antisense A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0.0060935, 0 0 0 0 ENSG00000229454.1 ENST00000447148.1 chr9:88370957-88380027 3 426 8640 intergenic -0.31 0 0,1,0 0 0,0,0 127.539906103286 5.34930555555556 0 279.976525821596 10.2314814814815 1.434 375.359154929577 16.121412037037 4.016 0 0 cat,chimp,cow,dog,elephant,guinea_pig,horse,human,macaque,marmoset,mouse,opossum,orangutan,panda,pig,rabbit,rat, lincRNA lincRNA A549@0.0078615,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0.004541,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000230303.1 ENST00000418478.1 chr9:88400637-88406454 3 357 5456 intergenic 4.14 0 0,0,0 0 0,0,0 0 16.3570381231672 0 102.165266106443 17.2657624633431 3.472 100.03081232493 36.116568914956 8.507 0 0 cat,chimp,cow,guinea_pig,horse,human,macaque,marmoset,orangutan,panda,rabbit, lincRNA lincRNA A549@0.0132295,AG04450@0,BJ@0.006839,GM12878@0.029059,H1HESC@0.004951,HELAS3@0.03416,HEPG2@0.093887,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0.0200035,NHEK@0.003151,NHLF@0,SKNSHRA@0.0598615, 0 0 0 0 ENSG00000230303.1 ENST00000439544.1 chr9:88400914-88408395 5 468 7005 intergenic 4.14 0 0,0,0 0 0,0,0 35.1068376068376 10.3567451820128 0 128.688034188034 11.5022127052106 9.251 125.388888888889 26.8362598144183 11.56 0 0 cat,chimp,cow,elephant,horse,human,macaque,marmoset,mouse,orangutan, lincRNA lincRNA A549@0.0132295,AG04450@0,BJ@0.006839,GM12878@0.029059,H1HESC@0.004951,HELAS3@0.03416,HEPG2@0.093887,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0.0200035,NHEK@0.003151,NHLF@0,SKNSHRA@0.0598615, 0 0 0 0 ENSG00000230303.1 ENST00000443630.1 chr9:88400916-88406449 4 488 5039 intergenic 4.14 0 0,0,0 0 0,0,0 33.6680327868852 14.3974995038698 0 122.924180327869 13.9495931732487 3.472 119.706967213115 34.5181583647549 8.507 0 0 cat,chimp,cow,dog,elephant,guinea_pig,horse,human,macaque,marmoset,opossum,orangutan,panda, lincRNA lincRNA A549@0.0132295,AG04450@0,BJ@0.006839,GM12878@0.029059,H1HESC@0.004951,HELAS3@0.03416,HEPG2@0.093887,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0.0200035,NHEK@0.003151,NHLF@0,SKNSHRA@0.0598615, 0 0 0 0 ENSG00000230303.1 ENST00000456242.1 chr9:88400918-88401444 2 417 107 intergenic 1.62 0 0,0,0 0 0,0,0 39.400479616307 133.738317757009 0 179.429256594724 166.542056074766 8.398 197.796163069544 298.14953271028 21.909 0 0 cat,chimp,cow,dog,elephant,guinea_pig,horse,human,macaque,marmoset,mouse,opossum,orangutan,panda,rabbit,rat, lincRNA lincRNA A549@0.0132295,AG04450@0,BJ@0.006839,GM12878@0.029059,H1HESC@0.004951,HELAS3@0.03416,HEPG2@0.093887,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0.0200035,NHEK@0.003151,NHLF@0,SKNSHRA@0.0598615, 175 2 113 2 ENSG00000235819.1 ENST00000438582.1 chr9:89029197-89029485 2 195 91 intergenic 0 0 0,0,0 0 0,0,0 0 0 0 27.3589743589744 0 0 28.0358974358974 0 0 0 0 chimp,horse,human,macaque,marmoset,orangutan, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000232211.1 ENST00000443163.1 chr9:89247062-89311411 3 527 63818 intergenic 1.50 0 0,0,0 0 0,0,0 0 23.3545864803034 0 0 24.422843085023 0 0 24.4470682252656 0 0 0 chimp,cow,dog,human,macaque,marmoset,orangutan,panda, lincRNA lincRNA A549@0,AG04450@0,BJ@0.009132,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0.002491,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000226237.1 ENST00000415801.1 chr9:89563614-89616948 7 4380 48942 intergenic 5.25 1 0,1,0 1 0,0,0 3.02876712328767 22.9287524008009 95.868 10.1002283105023 22.5405173470639 147.379 10.8561643835616 23.1511993788566 155.821 0 0 chimp,cow,dog,horse,human,macaque,marmoset,orangutan,pig, lincRNA processed_transcript A549@0,AG04450@0.0695915,BJ@0.240898,GM12878@0,H1HESC@0.0029775,HELAS3@1.22063,HEPG2@0.0484985,HMEC@0.033601,HSMM@0.0887325,HUVEC@0.0111535,K562@0,MCF7@0,NHEK@0.016061,NHLF@0.017262,SKNSHRA@0.0904925, 0 0 0 0 ENSG00000236709.1 ENST00000431813.1 chr9:90168369-90169374 2 700 303 intronic -12.17 0 0,0,1 0 0,0,0 0 0 0 5.80857142857143 0 0 5.86857142857143 0 0 0 0 chimp,dog,guinea_pig,human,macaque,marmoset,orangutan,panda,rabbit, sense_intronic sense_intronic A549@0.144597,AG04450@0,BJ@0.0061105,GM12878@0.0695365,H1HESC@0.106,HELAS3@0.015274,HEPG2@0.011497,HMEC@0,HSMM@0.08182,HUVEC@0.111484,K562@0.0607665,MCF7@0,NHEK@0.00296033,NHLF@0,SKNSHRA@0.01291, 0 0 0 0 ENSG00000233884.1 ENST00000411992.1 chr9:90463028-90468357 4 977 4346 intergenic 2.40 0 0,0,0 0 0,0,0 0 0 0 0 0 0 0 0 0 0 0 chimp,elephant,horse,human,macaque,marmoset,orangutan,panda, antisense antisense A549@0.0044255,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000214888.2 ENST00000399186.2 chr9:90471930-90474314 2 2012 370 intergenic 6.28 1 0,0,0 0 0,1,0 0 0 0 0 0 0 208.638170974155 0 0 0 1 chimp,human,macaque,orangutan, antisense antisense A549@0.002743,AG04450@0,BJ@0.003553,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0.002042,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000234460.1 ENST00000447524.1 chr9:90479081-90481205 2 450 1672 intergenic 4.72 0 0,0,1 0 0,0,0 0 0 0 2.12444444444444 7 0 12.4755555555556 8.67404306220096 0 0 0 cat,chimp,cow,dog,elephant,horse,human,macaque,marmoset,mouse,orangutan,panda,pig,rabbit,rat, lincRNA lincRNA A549@1.9752,AG04450@0.0868145,BJ@0,GM12878@0,H1HESC@0,HELAS3@0.43731,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0.112237,SKNSHRA@0, 0 0 0 0 ENSG00000228189.3 ENST00000418343.1 chr9:91242111-91267051 4 1212 23722 intergenic 3.32 0 0,0,0 0 0,0,1 0 0 0 0 0.79112216507883 3.484 0 1.76123429727679 6.354 0 0 chimp,human,macaque,marmoset,orangutan, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000228189.3 ENST00000544644.1 chr9:91262094-91267075 2 680 4299 intergenic -5.49 0 0,0,0 0 0,0,1 0 0 0 0 1.78832286578274 3.484 0 1.86764363805536 6.354 1 1 chimp,human,macaque,marmoset,orangutan, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000228658.1 ENST00000421482.1 chr9:91586553-91591213 2 389 4269 intergenic 2.13 0 0,0,0 0 0,0,0 0 0 10.34 0 0 108.759 0 0 196.897 0 0 chimp,cow,horse,human,macaque,orangutan, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000231632.1 ENST00000439796.1 chr9:91624949-91625393 1 444 0 intergenic -2.27 0 0,0,0 0 0,0,1 0 0 0 0 0 5.88 0 0 6.08 0 0 chimp,human,macaque,marmoset,orangutan, lincRNA lincRNA A549@0.024913,AG04450@2.24324,BJ@0.527209,GM12878@0,H1HESC@0.50737,HELAS3@0.140128,HEPG2@0.0647435,HMEC@0,HSMM@0.161816,HUVEC@0.275668,K562@0,MCF7@0.0805665,NHEK@0.011671,NHLF@0.672551,SKNSHRA@4.70085, 0 0 0 0 ENSG00000224945.1 ENST00000456944.1 chr9:91703519-91724213 2 581 20111 intronic -4.80 0 0,0,1 0 0,0,0 0 2.22813385709313 0 0.464716006884682 2.46591417632142 2.55 0.46815834767642 3.09845358261648 2.65 0 0 chimp,human,marmoset, sense_intronic sense_intronic A549@0.440049,AG04450@2.81989,BJ@0.746454,GM12878@0.036791,H1HESC@1.45812,HELAS3@0.556033,HEPG2@0.38517,HMEC@0.004069,HSMM@0.027591,HUVEC@1.50131,K562@0.0369635,MCF7@0.586302,NHEK@0.0427233,NHLF@1.4032,SKNSHRA@4.27327, 0 0 0 0 ENSG00000224945.1 ENST00000429700.1 chr9:91703802-91724849 3 582 20461 intronic -2.78 0 0,0,1 0 0,0,0 0 2.1900200381213 0 1.77835051546392 2.49850935926885 2.104 1.83333333333333 3.12316113581936 2.176 0 0 chimp,elephant,human,macaque,marmoset,orangutan,pig, sense_intronic sense_intronic A549@0.440049,AG04450@2.81989,BJ@0.746454,GM12878@0.036791,H1HESC@1.45812,HELAS3@0.556033,HEPG2@0.38517,HMEC@0.004069,HSMM@0.027591,HUVEC@1.50131,K562@0.0369635,MCF7@0.586302,NHEK@0.0427233,NHLF@1.4032,SKNSHRA@4.27327, 0 0 0 0 ENSG00000237372.1 ENST00000444374.1 chr9:92316566-92334585 2 820 17197 intergenic 1.06 0 1,1,1 1 0,0,0 0 0 0 0 0.684770599523173 6.2 0 0.847938593940804 6.363 0 0 chimp,human,macaque,orangutan,pig, lincRNA processed_transcript A549@0,AG04450@0,BJ@0,GM12878@9.59567,H1HESC@0.732901,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0.068665,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000226206.1 ENST00000421297.1 chr9:92501142-92523200 3 913 21141 intergenic 5.86 0 0,0,1 0 0,0,0 17.170865279299 6.80445579679296 0 12.3658269441402 2.85374390993803 0 12.5366922234392 9.62291282342368 0 0 0 chimp,human,macaque,marmoset,orangutan, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0.0373095,H1HESC@0,HELAS3@0.0074,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000236507.1 ENST00000442086.1 chr9:92503174-92504508 2 926 406 intergenic 3.19 0 0,1,0 0 0,0,0 0 63.6206896551724 28.013 19.232181425486 17.7093596059113 13.554 21.7861771058315 18.3990147783251 13.758 0 0 chimp,cow,horse,human,macaque,marmoset,mouse,orangutan,pig,rabbit,rat, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000237626.1 ENST00000446201.1 chr9:92740564-92749768 2 455 8747 intergenic -8.08 1 0,0,0 0 0,0,0 0 0 0 0 0.453641248428032 0 0 0.473762432834115 0 0 0 chimp,human,macaque,marmoset,orangutan, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0.013507,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000227555.1 ENST00000426593.1 chr9:92782936-92803781 4 2716 18123 intergenic 6.28 0 0,0,0 0 0,0,0 0 0.621861722672847 0 0.639175257731959 3.15830712354467 0 0.646907216494845 3.14258125034487 0 0 0 horse,human,macaque,marmoset,orangutan, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0.0014345,SKNSHRA@0, 0 0 0 0 ENSG00000231107.1 ENST00000425666.1 chr9:93063184-93195771 3 1010 131573 intergenic 12.20 1 1,1,1 0 0,0,0 0 0.477985604949344 0 6.58118811881188 0.547749158261953 0 8.31683168316832 1.02937532776481 0 0 0 chimp,dog,human,macaque,marmoset,orangutan,rabbit, lincRNA lincRNA A549@0.125553,AG04450@0,BJ@0,GM12878@0,H1HESC@0.002048,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0.660564,NHEK@0.0304633,NHLF@0.001926,SKNSHRA@0, 0 0 0 0 ENSG00000231107.1 ENST00000436671.1 chr9:93145892-93195787 3 752 49139 intergenic 1.14 0 0,1,1 0 0,0,0 0 0.521174627078288 0 3.62765957446809 0.0908443395266489 0 3.78856382978723 1.15592502899937 0 0 0 chimp,human,macaque,marmoset,orangutan, lincRNA lincRNA A549@0.125553,AG04450@0,BJ@0,GM12878@0,H1HESC@0.002048,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0.660564,NHEK@0.0304633,NHLF@0.001926,SKNSHRA@0, 0 0 0 0 ENSG00000229613.1 ENST00000427523.1 chr9:93225806-93229227 2 407 3012 intergenic 0 1 0,0,0 0 0,0,0 0 0 0 0 0 0 0 0 0 0 0 chimp,human,macaque,marmoset,orangutan,rabbit, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0.011462,H1HESC@0.014532,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000229613.1 ENST00000449990.1 chr9:93225941-93345026 6 785 118290 intergenic 3.86 0 0,0,0 0 0,0,0 0 1.58608504522783 0 0 1.56577056386846 0 0 1.94017245751965 0 0 0 chimp,human,macaque,marmoset,orangutan, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0.011462,H1HESC@0.014532,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000229613.1 ENST00000429044.1 chr9:93323311-93344976 2 289 21374 intergenic 0 0 0,0,0 0 0,0,0 0 1.32969963507065 0 0 0.915738748011603 0 0 0.980069243005521 0 0 0 chimp,human,macaque, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0.011462,H1HESC@0.014532,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000228216.1 ENST00000427745.1 chr9:93719542-93727675 2 293 7838 intergenic 0 0 0,1,0 0 0,0,0 0 0 0 0 0 0 0 0 0 0 0 chimp,human,macaque,orangutan, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0.044252,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0.0136305,NHEK@0.0358027,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000230537.1 ENST00000423380.1 chr9:93867239-93869586 3 812 1531 intergenic 0.77 1 0,0,0 0 0,0,0 0 5.02939255388635 0 0 1.56107119529719 0 0 6.82495101241019 0 0 0 chimp,human,macaque,marmoset,orangutan, lincRNA lincRNA A549@0.0691775,AG04450@0.01678,BJ@0.018022,GM12878@0.005752,H1HESC@0.0467985,HELAS3@0.031767,HEPG2@0.195372,HMEC@0,HSMM@0.0201975,HUVEC@0,K562@0.052606,MCF7@0.0300495,NHEK@0.00783167,NHLF@0.026202,SKNSHRA@0.04459, 0 0 0 0 ENSG00000229694.1 ENST00000439438.1 chr9:93881344-93945044 3 451 63245 intergenic 2.97 1 0,0,0 0 0,0,0 99.179600886918 2.26364139457665 7.92 28.1241685144124 1.58989643450075 19.847 28.649667405765 6.05220966084275 43.444 0 0 chimp,cow,human,macaque,marmoset,orangutan,pig, lincRNA lincRNA A549@0,AG04450@0.384802,BJ@0.0638205,GM12878@0,H1HESC@0.006869,HELAS3@0.0138215,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0.226798,SKNSHRA@0.010525, 0 0 0 0 ENSG00000237422.1 ENST00000457976.1 chr9:93881420-93925369 2 504 43443 intergenic 6.27 1 0,0,0 0 0,0,0 0 3.29544460557512 0 0 1.19285040167576 27.394 0 2.14354441452018 28.68 0 0 chimp,cow,horse,human,macaque,marmoset,orangutan,pig, lincRNA lincRNA A549@0.055489,AG04450@0.077507,BJ@0.037173,GM12878@0,H1HESC@0.070089,HELAS3@0.028352,HEPG2@0.103175,HMEC@0,HSMM@0.0243985,HUVEC@0.0138145,K562@0.0478115,MCF7@0.0040635,NHEK@0.00252267,NHLF@0.0076265,SKNSHRA@0.013475, 0 0 0 0 ENSG00000235641.1 ENST00000423719.1 chr9:93922051-93927858 2 2743 3062 intergenic 5.72 0 0,0,0 0 0,0,0 0 0 0 9.98687568355815 0 0 10.4557054320087 1.34911822338341 21.238 0 0 chimp,horse,human,marmoset,orangutan,pig, lincRNA lincRNA A549@0,AG04450@0.0291,BJ@0.020104,GM12878@0,H1HESC@0.032749,HELAS3@0.0029005,HEPG2@0,HMEC@0.002983,HSMM@0.017199,HUVEC@0,K562@0.014868,MCF7@0,NHEK@0,NHLF@0.0228015,SKNSHRA@0.0057625, 0 0 0 0 ENSG00000229694.1 ENST00000437389.1 chr9:93932951-93944999 2 300 11746 intergenic 2.97 1 0,0,0 0 0,0,0 95.85 0 0 28.77 0.393665928826835 9.424 29.2566666666667 0.408649753107441 228.711 0 0 chimp,elephant,horse,human,macaque,marmoset,orangutan,panda,pig,rat, lincRNA lincRNA A549@0,AG04450@0.384802,BJ@0.0638205,GM12878@0,H1HESC@0.006869,HELAS3@0.0138215,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0.226798,SKNSHRA@0.010525, 0 0 0 0 ENSG00000229694.1 ENST00000414768.1 chr9:93932954-93944999 4 558 11481 intergenic 2.97 1 0,0,0 0 0,0,0 51.5322580645161 0 0 15.4677419354839 0.40275237348663 9.424 15.7293906810036 0.418082048602038 227.346 0 0 chimp,human,macaque,marmoset,orangutan, lincRNA lincRNA A549@0,AG04450@0.384802,BJ@0.0638205,GM12878@0,H1HESC@0.006869,HELAS3@0.0138215,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0.226798,SKNSHRA@0.010525, 0 0 0 0 ENSG00000229694.1 ENST00000421595.1 chr9:93944339-93944999 2 532 126 intergenic 2.97 1 0,0,0 0 0,0,0 54.0507518796992 0 0 16.2236842105263 0 0 16.4981203007519 0 0 0 0 chimp,human,macaque,marmoset,orangutan, lincRNA lincRNA A549@0,AG04450@0.384802,BJ@0.0638205,GM12878@0,H1HESC@0.006869,HELAS3@0.0138215,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0.226798,SKNSHRA@0.010525, 0 0 0 0 ENSG00000233081.1 ENST00000442072.1 chr9:94188520-94189426 2 472 432 intergenic 0 0 0,0,1 0 0,0,0 19.7478813559322 0 0 29.2033898305085 0 0 34.6419491525424 0 0 0 0 cat,chimp,dog,elephant,horse,human,macaque,marmoset,orangutan, lincRNA lincRNA A549@0.0291365,AG04450@0.112511,BJ@0.116294,GM12878@0,H1HESC@0.055124,HELAS3@0.114899,HEPG2@0.135773,HMEC@0,HSMM@0,HUVEC@0,K562@0.0420035,MCF7@0.136595,NHEK@0.013558,NHLF@0.147689,SKNSHRA@0.128961, 0 0 0 0 ENSG00000225511.1 ENST00000367276.4 chr9:94903580-94910588 2 736 6270 intergenic -2.21 1 0,1,1 0 0,0,0 0 10.8360446570973 0 41.6317934782609 8.18755980861244 81.312 91.34375 11.3993620414673 80.995 0 0 chimp,human,macaque,marmoset,orangutan, lincRNA processed_transcript A549@0.149718,AG04450@1.46076,BJ@0.141826,GM12878@0.190378,H1HESC@0.0417475,HELAS3@0,HEPG2@0.021714,HMEC@0.011649,HSMM@0.032832,HUVEC@0.124124,K562@0.005092,MCF7@0.374764,NHEK@0.00596233,NHLF@0.166602,SKNSHRA@0.276545, 138 2 0 0 ENSG00000225511.1 ENST00000417983.1 chr9:94903721-94910588 3 700 6163 intergenic 2.28 1 0,1,1 0 0,0,0 0 11.0241765374006 0 30.6228571428571 8.32970955703391 90.254 80.3914285714286 11.5972740548434 91.637 0 0 chimp,human,macaque,mouse,orangutan, lincRNA processed_transcript A549@0.149718,AG04450@1.46076,BJ@0.141826,GM12878@0.190378,H1HESC@0.0417475,HELAS3@0,HEPG2@0.021714,HMEC@0.011649,HSMM@0.032832,HUVEC@0.124124,K562@0.005092,MCF7@0.374764,NHEK@0.00596233,NHLF@0.166602,SKNSHRA@0.276545, 0 0 0 0 ENSG00000225511.1 ENST00000416438.1 chr9:94903749-94921890 4 1996 16139 intergenic 6.60 0 0,1,0 0 0,0,0 0 5.67482495817585 0 10.2124248496994 4.79949191399715 89.585 23.8026052104208 16.7120639444823 98.393 0 0 chimp,horse,human,macaque,marmoset,orangutan, lincRNA processed_transcript A549@0.149718,AG04450@1.46076,BJ@0.141826,GM12878@0.190378,H1HESC@0.0417475,HELAS3@0,HEPG2@0.021714,HMEC@0.011649,HSMM@0.032832,HUVEC@0.124124,K562@0.005092,MCF7@0.374764,NHEK@0.00596233,NHLF@0.166602,SKNSHRA@0.276545, 0 0 0 0 ENSG00000225511.1 ENST00000438322.1 chr9:94903878-94907392 4 420 3088 intergenic 2.23 1 0,0,1 0 0,0,0 0 22.0019430051813 0 16.3333333333333 16.6243523316062 100.601 31.7571428571429 16.6586787564767 130.241 0 0 cat,chimp,horse,human,macaque,marmoset,orangutan, lincRNA processed_transcript A549@0.149718,AG04450@1.46076,BJ@0.141826,GM12878@0.190378,H1HESC@0.0417475,HELAS3@0,HEPG2@0.021714,HMEC@0.011649,HSMM@0.032832,HUVEC@0.124124,K562@0.005092,MCF7@0.374764,NHEK@0.00596233,NHLF@0.166602,SKNSHRA@0.276545, 0 0 0 0 ENSG00000225511.1 ENST00000430945.1 chr9:94907223-94910588 2 474 2889 intergenic -0.37 1 0,0,1 0 0,0,0 0 0 0 0 0 0 0 6.93388715818622 0 0 0 chimp,human,macaque,marmoset,orangutan, lincRNA processed_transcript A549@0.149718,AG04450@1.46076,BJ@0.141826,GM12878@0.190378,H1HESC@0.0417475,HELAS3@0,HEPG2@0.021714,HMEC@0.011649,HSMM@0.032832,HUVEC@0.124124,K562@0.005092,MCF7@0.374764,NHEK@0.00596233,NHLF@0.166602,SKNSHRA@0.276545, 0 0 105 2 ENSG00000225511.1 ENST00000421234.1 chr9:94909874-94910588 2 465 247 intergenic 1.72 1 0,0,1 1 0,0,0 0 0 0 0 0 0 0 81.1012145748988 0 0 0 chimp,horse,human,macaque,marmoset,orangutan, lincRNA processed_transcript A549@0.149718,AG04450@1.46076,BJ@0.141826,GM12878@0.190378,H1HESC@0.0417475,HELAS3@0,HEPG2@0.021714,HMEC@0.011649,HSMM@0.032832,HUVEC@0.124124,K562@0.005092,MCF7@0.374764,NHEK@0.00596233,NHLF@0.166602,SKNSHRA@0.276545, 0 0 0 0 ENSG00000225511.1 ENST00000444476.1 chr9:94909994-94910588 2 454 138 intergenic 3.42 1 0,1,1 0 0,0,0 0 0 0 0 0 0 0 145.159420289855 0 0 0 chimp,human,macaque,marmoset,orangutan, lincRNA processed_transcript A549@0.149718,AG04450@1.46076,BJ@0.141826,GM12878@0.190378,H1HESC@0.0417475,HELAS3@0,HEPG2@0.021714,HMEC@0.011649,HSMM@0.032832,HUVEC@0.124124,K562@0.005092,MCF7@0.374764,NHEK@0.00596233,NHLF@0.166602,SKNSHRA@0.276545, 0 0 0 0 ENSG00000236717.1 ENST00000415471.1 chr9:94912663-94919727 2 209 6853 intergenic 0 0 0,0,0 0 0,0,0 84.8468899521531 0 5.654 41.1674641148325 2.52152342039982 239 498.057416267943 5.64541076900627 514 0 0 cat,chimp,dog,elephant,guinea_pig,horse,human,macaque,marmoset,mouse,opossum,orangutan,panda,pig,platypus,rabbit,rat, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0.0393265,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0.064629, 0 0 0 0 ENSG00000225511.1 ENST00000434944.1 chr9:94914876-94920770 6 790 5094 intergenic -4.46 0 0,0,0 0 0,0,0 0 4.64153906556733 0 0 1.73596387907342 0 0 9.6866902237927 0 0 0 chimp,human,macaque,marmoset,orangutan, lincRNA processed_transcript A549@0.149718,AG04450@1.46076,BJ@0.141826,GM12878@0.190378,H1HESC@0.0417475,HELAS3@0,HEPG2@0.021714,HMEC@0.011649,HSMM@0.032832,HUVEC@0.124124,K562@0.005092,MCF7@0.374764,NHEK@0.00596233,NHLF@0.166602,SKNSHRA@0.276545, 0 0 0 0 ENSG00000236115.1 ENST00000457003.1 chr9:94967638-94972440 3 330 4468 intergenic -3.10 1 0,0,0 0 0,0,0 0 0 0 0 0 0 0 0 0 0 0 chimp,human,macaque,orangutan, antisense antisense A549@0,AG04450@0.034337,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000223446.1 ENST00000428958.1 chr9:95857221-95857811 2 236 352 intergenic 0 0 0,1,1 0 0,0,0 0 0 0 0 0 11.667 0 0 14.091 0 0 chimp,human,macaque,marmoset,orangutan, antisense antisense A549@0,AG04450@0.0124385,BJ@0,GM12878@0.087275,H1HESC@0,HELAS3@0,HEPG2@0.011461,HMEC@0,HSMM@0,HUVEC@0,K562@0.0339505,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000203364.2 ENST00000366188.2 chr9:95909322-95910838 3 407 1105 intergenic -7.15 0 0,0,0 0 0,0,0 0 0 0 0 0 0 0 0 0 0 0 chimp,human,orangutan, lincRNA lincRNA A549@0.013474,AG04450@0,BJ@0,GM12878@0.022868,H1HESC@0,HELAS3@0.091459,HEPG2@0.171454,HMEC@0,HSMM@0,HUVEC@0,K562@0.0059905,MCF7@0.0299075,NHEK@0.00966,NHLF@0,SKNSHRA@0, 1 96 0 0 ENSG00000237385.1 ENST00000443716.1 chr9:96192624-96193581 2 639 316 intergenic -0.25 0 0,1,1 0 0,0,0 0 0 0 13.4647887323944 0 0 14.5915492957746 0 5.832 0 0 chimp,human,macaque,orangutan,rabbit, antisense antisense A549@0.0135455,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0.03331,HEPG2@0.0433545,HMEC@0,HSMM@0,HUVEC@0,K562@0.007663,MCF7@0.059023,NHEK@0.00411,NHLF@0.003044,SKNSHRA@0.0035455, 0 0 0 0 ENSG00000227603.1 ENST00000445280.1 chr9:96197614-96199403 2 689 1098 intergenic 0.63 0 0,1,0 0 0,0,0 0 0 58.93 2.29027576197388 3.83242258652095 22.532 2.42089985486212 4.05100182149362 27.455 0 0 chimp,horse,human,orangutan, antisense antisense A549@0.28278,AG04450@0.135649,BJ@0.087203,GM12878@0.144507,H1HESC@0.104451,HELAS3@0.409293,HEPG2@0.147639,HMEC@0.071108,HSMM@0.17414,HUVEC@0.0313025,K562@0.101243,MCF7@0.598208,NHEK@0.258617,NHLF@0.112509,SKNSHRA@0.277409, 0 0 0 0 ENSG00000234543.1 ENST00000434312.1 chr9:96301210-96322860 2 363 21285 intronic -14.30 0 0,0,1 0 0,0,0 0 77.9754287056612 0 0 49.1883486023021 0 0 47.405543810195 0 0 0 chimp,human,macaque,marmoset,orangutan, processed_transcript processed_transcript A549@0.42295,AG04450@0.214389,BJ@0.10193,GM12878@1.77501,H1HESC@0.149014,HELAS3@1.91789,HEPG2@0.586556,HMEC@0.044566,HSMM@0.058614,HUVEC@0.135488,K562@1.51321,MCF7@0.533137,NHEK@0.423517,NHLF@0.154704,SKNSHRA@0.268081, 0 0 0 0 ENSG00000231990.1 ENST00000443771.1 chr9:96619365-96620615 2 389 859 intergenic -0.27 0 0,0,1 0 0,0,0 1.61182519280206 0 0 0 0 0 0 0 0 0 0 chimp,human,macaque,marmoset,orangutan,panda, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0.111519,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000235601.1 ENST00000454594.1 chr9:96717879-96721422 3 304 3235 intergenic 0 0 0,1,0 1 0,0,0 0 6.04327666151468 0 2.90131578947368 9.13570324574961 234.878 1.94078947368421 10.941885625966 196.244 0 0 chimp,human,macaque,marmoset,orangutan, lincRNA processed_transcript A549@0.0132605,AG04450@0.0020485,BJ@0,GM12878@0,H1HESC@0,HELAS3@0.0069085,HEPG2@0.005663,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0.0804145,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000235601.1 ENST00000453045.1 chr9:96718116-96720204 2 1443 643 intergenic 3.02 1 0,1,1 0 0,0,0 0 0 0 0 0 234.433 0 0 198.586 0 0 chimp,cow,human,macaque,orangutan,panda, lincRNA processed_transcript A549@0.0132605,AG04450@0.0020485,BJ@0,GM12878@0,H1HESC@0,HELAS3@0.0069085,HEPG2@0.005663,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0.0804145,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000230262.1 ENST00000416309.1 chr9:96938884-96966818 4 1283 26645 intergenic -2.65 0 0,0,0 0 0,0,0 0 6.21497466691687 0 0 6.74817038844061 0 0 7.75327453556014 0 0 0 cat,chimp,cow,elephant,human,macaque,marmoset,orangutan, lincRNA lincRNA A549@0.008433,AG04450@0.0061655,BJ@0.00556,GM12878@0.0113855,H1HESC@0,HELAS3@0.017798,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0.0037785,K562@0.046907,MCF7@0.188917,NHEK@0.010258,NHLF@0,SKNSHRA@0.0184245, 0 0 0 0 ENSG00000232063.1 ENST00000454869.1 chr9:97094758-97123230 3 2159 26309 intergenic 2.40 0 0,1,0 1 0,0,0 0 0.275951195408415 0 5.8471514590088 9.51754152571364 0 6.55859194071329 29.5518643810103 0 0 0 chimp,human,macaque,orangutan, lincRNA processed_transcript A549@0.204697,AG04450@0.179003,BJ@0.247841,GM12878@0.69084,H1HESC@0.161845,HELAS3@0.634003,HEPG2@0.200242,HMEC@0.273852,HSMM@0.157476,HUVEC@0.391267,K562@1.4198,MCF7@0.226766,NHEK@0.497167,NHLF@0.142054,SKNSHRA@0.354093, 0 0 0 0 ENSG00000235311.1 ENST00000417264.1 chr9:97247982-97250077 2 153 1940 intergenic 5.60 0 0,0,0 0 0,0,0 0 0 0 0 0 0 0 0 0 0 0 chimp,elephant,horse,human,macaque,marmoset,orangutan,pig, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000231806.1 ENST00000452148.1 chr9:97320996-97330312 2 1078 8236 exonic 6.26 0 0,1,0 0 0,0,0 71.582560296846 407.363040310831 0 81.1484230055659 17.8493200582807 2.83 99.0844155844156 20.0959203496843 2.84 0 0 chimp,human,rat, lincRNA processed_transcript A549@1.27929,AG04450@0,BJ@0.0158795,GM12878@0,H1HESC@3.50477,HELAS3@2.02448,HEPG2@2.14221,HMEC@0,HSMM@0.0975185,HUVEC@0,K562@0,MCF7@4.40048,NHEK@0,NHLF@0.003573,SKNSHRA@0.004209, 0 0 0 0 ENSG00000230815.1 ENST00000437846.1 chr9:97586554-97587055 2 422 77 intronic -2.13 0 0,1,0 0 0,0,0 0 0 0 3.62559241706161 0 17.995 10.3175355450237 0 18.444 0 0 chimp,cow,dog,elephant,guinea_pig,horse,human,macaque,marmoset,orangutan,panda,pig,rabbit, sense_intronic sense_intronic A549@0.039924,AG04450@0.0637775,BJ@0.028663,GM12878@0.03442,H1HESC@0.01943,HELAS3@0,HEPG2@0.037337,HMEC@0.003393,HSMM@0.0186275,HUVEC@0.165065,K562@0.098354,MCF7@0.001879,NHEK@0.128169,NHLF@0,SKNSHRA@0.098292, 0 0 0 0 ENSG00000236095.1 ENST00000416455.1 chr9:97662711-97667036 3 776 3545 intronic 2.19 0 0,1,1 0 0,0,0 71.8840206185567 38.9438645980254 0 11.3067010309278 26.5712270803949 0 11.5644329896907 32.6200282087447 0 0 0 cat,chimp,cow,dog,elephant,horse,human,macaque,marmoset,orangutan,panda,rabbit, sense_intronic sense_intronic A549@0.414887,AG04450@0.010513,BJ@0.0026955,GM12878@0.0238145,H1HESC@0.0203755,HELAS3@0.020855,HEPG2@0.0387615,HMEC@0.001599,HSMM@0.031554,HUVEC@0.0760185,K562@0.0240655,MCF7@0.052709,NHEK@0.0113847,NHLF@0,SKNSHRA@0.0404205, 0 0 0 0 ENSG00000224764.1 ENST00000439872.1 chr9:97690833-97697228 2 485 5908 intronic 1.90 0 0,0,0 0 0,0,0 0 4.74119837508463 0 57.3855670103093 14.302471225457 0 63.3134020618557 15.1667230873392 0 0 0 chimp,cow,human,orangutan,panda, antisense antisense A549@0.073409,AG04450@0.0167605,BJ@0.031549,GM12878@0,H1HESC@0,HELAS3@0.0095985,HEPG2@0.0336065,HMEC@0,HSMM@0.022948,HUVEC@0.0485435,K562@0,MCF7@0.016794,NHEK@0,NHLF@0.0399765,SKNSHRA@0, 0 0 0 0 ENSG00000229065.1 ENST00000423075.1 chr9:97875990-97876743 2 527 224 intronic -5.24 0 0,1,0 0 0,0,0 0 0 0 0 0 0 0 0 0 0 0 chimp,dog,human,macaque,marmoset,orangutan, antisense antisense A549@0.69577,AG04450@0.178385,BJ@0.230759,GM12878@0.0283925,H1HESC@0.0039215,HELAS3@0.0705005,HEPG2@0.0584845,HMEC@0.00774,HSMM@0.117953,HUVEC@0.0920555,K562@0.0291315,MCF7@0.505757,NHEK@0.244073,NHLF@0.069598,SKNSHRA@0.602746, 0 0 0 0 ENSG00000237857.1 ENST00000433644.1 chr9:98177781-98189078 2 737 10558 intergenic 3.13 0 0,1,0 1 0,0,0 26.0271370420624 7.42479636294753 0 43.4518317503392 15.9742375449896 0 39.3134328358209 16.9892972153817 0 0 0 chimp,human,macaque,marmoset, lincRNA lincRNA A549@0.89095,AG04450@0.258835,BJ@0.023036,GM12878@0.156562,H1HESC@0.361362,HELAS3@1.78131,HEPG2@0.216303,HMEC@0.371231,HSMM@0.0123385,HUVEC@0.0161085,K562@1.14743,MCF7@1.07239,NHEK@0.42141,NHLF@0.081322,SKNSHRA@0.012302, 0 0 0 0 ENSG00000229345.1 ENST00000419620.1 chr9:98361827-98368568 3 392 6345 intergenic -0.73 1 0,0,0 0 0,0,0 93.2244897959184 5.12955082742317 286.047 87.6122448979592 5.81449960598897 271.166 88.5765306122449 5.73790386130812 282.197 0 0 cat,chimp,cow,horse,human,macaque,marmoset,orangutan,panda, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000228142.1 ENST00000422343.1 chr9:98412436-98478000 2 401 65161 intergenic -0.18 1 0,1,1 0 0,0,0 0 3.86257116987155 117.774 0 8.0630131520388 144.73 0 9.8379705652154 143.368 0 0 chimp,human,macaque,orangutan, processed_transcript processed_transcript A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0.0310725,HEPG2@0.109391,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0.0048415,SKNSHRA@0, 0 0 0 0 ENSG00000175611.6 ENST00000433656.1 chr9:98520892-98637762 5 1112 115750 intergenic 0.34 0 0,1,0 1 0,0,0 0 9.4849848812095 0 0 11.8915421166307 11.406 24.6960431654676 16.5266090712743 13.829 0 0 chimp,human,macaque,orangutan, lincRNA processed_transcript A549@0.66571,AG04450@1.64992,BJ@0.721639,GM12878@2.27701,H1HESC@0.984862,HELAS3@3.45885,HEPG2@2.29002,HMEC@1.72761,HSMM@0.888835,HUVEC@1.79387,K562@0.517397,MCF7@3.34131,NHEK@2.0486,NHLF@1.19121,SKNSHRA@3.70451, 0 0 0 0 ENSG00000175611.6 ENST00000412446.1 chr9:98575575-98638259 3 806 61874 exonic 8.36 0 0,1,1 1 0,0,0 0 7.43737272521576 0 0 13.9098813718201 5.744 0 15.6935223195526 8.051 0 0 chimp,human,macaque,marmoset,orangutan, lincRNA processed_transcript A549@0.66571,AG04450@1.64992,BJ@0.721639,GM12878@2.27701,H1HESC@0.984862,HELAS3@3.45885,HEPG2@2.29002,HMEC@1.72761,HSMM@0.888835,HUVEC@1.79387,K562@0.517397,MCF7@3.34131,NHEK@2.0486,NHLF@1.19121,SKNSHRA@3.70451, 0 0 0 0 ENSG00000175611.6 ENST00000429781.1 chr9:98602882-98637869 3 2822 32161 intergenic 1.77 0 0,1,0 1 0,0,0 0 10.6004788408321 0 17.8352232459249 16.1970087994776 11.406 20.7873848334515 18.5391001523584 12.654 0 0 chimp,human,macaque,marmoset,orangutan,pig, lincRNA processed_transcript A549@0.66571,AG04450@1.64992,BJ@0.721639,GM12878@2.27701,H1HESC@0.984862,HELAS3@3.45885,HEPG2@2.29002,HMEC@1.72761,HSMM@0.888835,HUVEC@1.79387,K562@0.517397,MCF7@3.34131,NHEK@2.0486,NHLF@1.19121,SKNSHRA@3.70451, 0 0 0 0 ENSG00000175611.6 ENST00000427259.1 chr9:98632122-98637552 2 891 4537 intergenic -4.90 0 0,1,0 0 0,0,0 0 0 0 6.1952861952862 6.30967599735508 11.406 21.4870931537598 6.59863345823231 13.829 0 0 chimp,human,orangutan, lincRNA processed_transcript A549@0.66571,AG04450@1.64992,BJ@0.721639,GM12878@2.27701,H1HESC@0.984862,HELAS3@3.45885,HEPG2@2.29002,HMEC@1.72761,HSMM@0.888835,HUVEC@1.79387,K562@0.517397,MCF7@3.34131,NHEK@2.0486,NHLF@1.19121,SKNSHRA@3.70451, 0 0 0 0 ENSG00000175611.6 ENST00000448465.1 chr9:98632565-98637352 3 287 4496 intergenic -4.90 1 0,1,1 0 0,0,0 0 0 0 19.2334494773519 6.3672153024911 7.36 20.1393728222997 6.65880782918149 9.699 0 0 chimp,human,marmoset,orangutan, lincRNA processed_transcript A549@0.66571,AG04450@1.64992,BJ@0.721639,GM12878@2.27701,H1HESC@0.984862,HELAS3@3.45885,HEPG2@2.29002,HMEC@1.72761,HSMM@0.888835,HUVEC@1.79387,K562@0.517397,MCF7@3.34131,NHEK@2.0486,NHLF@1.19121,SKNSHRA@3.70451, 0 0 0 0 ENSG00000175611.6 ENST00000321517.3 chr9:98632566-98638258 3 1266 4422 exonic 15.47 1 1,1,1 1 0,0,0 0 0 0 8.83254344391785 6.47376752600633 5.744 10.8570300157978 6.77023971053822 7.808 0 0 chimp,elephant,human,macaque,orangutan, lincRNA processed_transcript A549@0.66571,AG04450@1.64992,BJ@0.721639,GM12878@2.27701,H1HESC@0.984862,HELAS3@3.45885,HEPG2@2.29002,HMEC@1.72761,HSMM@0.888835,HUVEC@1.79387,K562@0.517397,MCF7@3.34131,NHEK@2.0486,NHLF@1.19121,SKNSHRA@3.70451, 0 0 0 0 ENSG00000225194.1 ENST00000412122.1 chr9:98782876-98784042 2 862 302 intergenic -3.48 0 0,1,0 0 0,0,0 0 0 0 0 0 4.71 0 0 5.328 0 0 dog,horse,human,macaque,marmoset, lincRNA non_coding A549@0.0475495,AG04450@0,BJ@0,GM12878@0.0363295,H1HESC@0.032516,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0.040659,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0.032141, 0 0 0 0 ENSG00000237212.1 ENST00000432783.1 chr9:98857493-98864194 6 1571 5120 intergenic 2.62 0 0,1,0 0 0,0,0 0 11.903125 0 0 7.439453125 0 1.64544875875239 7.447265625 0 0 0 chimp,human,marmoset,orangutan, lincRNA lincRNA A549@0.074995,AG04450@0.0037545,BJ@0,GM12878@0,H1HESC@0.0013155,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0.0039115,NHEK@0,NHLF@0,SKNSHRA@0.006024, 0 0 0 0 ENSG00000232283.1 ENST00000448857.1 chr9:99008744-99012675 3 1069 2858 exonic 2.40 0 0,0,0 0 0,0,0 0 3.87578726382085 0 33.3629560336763 8.61791462561231 10.401 33.489242282507 8.90832750174948 11.343 0 0 chimp,dog,elephant,guinea_pig,horse,human,macaque,marmoset,orangutan,panda,pig, antisense antisense A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0.0233625,HEPG2@0.0591375,HMEC@0,HSMM@0,HUVEC@0,K562@0.009327,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0.005018, 0 0 0 0 ENSG00000234687.1 ENST00000422818.1 chr9:99265149-99265812 2 482 179 exonic -2.62 0 0,1,0 0 0,0,0 237.593360995851 464 5.736 54.4564315352697 113.072625698324 18.686 52.5912863070539 113.86592178771 19.884 0 0 cat,chimp,cow,dog,elephant,horse,human,macaque,marmoset,orangutan,panda,pig, antisense antisense A549@0.0171205,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0.0177945,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0.020498, 0 0 0 0 ENSG00000224848.1 ENST00000423924.1 chr9:99449338-99483403 2 423 33640 intergenic 2.45 0 0,1,0 1 0,0,0 0 1.57550535077289 0 0 2.26524970273484 0 0 3.56551724137931 0 0 0 chimp,horse,human,orangutan, lincRNA lincRNA A549@0.099621,AG04450@0.0110825,BJ@0.164395,GM12878@0,H1HESC@1.50239,HELAS3@0,HEPG2@0,HMEC@0.067441,HSMM@0.009683,HUVEC@0.014005,K562@0,MCF7@0.347938,NHEK@0.0923863,NHLF@0.0318825,SKNSHRA@0.90335, 0 0 0 0 ENSG00000243534.1 ENST00000442849.1 chr9:99839576-99844227 3 636 4011 intergenic 9.27 0 0,0,1 0 0,0,0 0 0 0 0 0 0 0 2.56569434056345 0 0 0 chimp,human,macaque,marmoset,orangutan,platypus, processed_transcript processed_transcript A549@0,AG04450@0.0138985,BJ@0,GM12878@0,H1HESC@0.0329135,HELAS3@0.005152,HEPG2@0,HMEC@0.017308,HSMM@0.0168235,HUVEC@0,K562@0.0072675,MCF7@0,NHEK@0.0112097,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000249385.1 ENST00000504063.1 chr9:99883188-99893292 2 2604 7498 intergenic -0.68 0 0,0,0 0 0,0,0 0 0 0 2.01996927803379 2.41451053614297 0 26.6359447004608 2.52160576153641 0 0 0 chimp,dog,human,macaque,marmoset,mouse,orangutan, lincRNA lincRNA A549@0.039506,AG04450@0.0057995,BJ@0.021062,GM12878@0.0842535,H1HESC@9.63401,HELAS3@0.235413,HEPG2@0.22833,HMEC@0.031425,HSMM@0.001579,HUVEC@0.004568,K562@0.090361,MCF7@0.062219,NHEK@0.0286543,NHLF@0.007421,SKNSHRA@0.21573, 0 0 0 0 ENSG00000159712.9 ENST00000354752.4 chr9:99918175-99983538 16 3660 61673 encompassing 10.48 0 0,1,0 0 0,0,0 0 0 0 16.9800546448087 3.41374669628525 0 69.353825136612 27.4775185251244 0 0 0 cat,chimp,cow,dog,elephant,guinea_pig,horse,human,macaque,marmoset,mouse,opossum,orangutan,pig,rabbit,rat, processed_transcript processed_transcript A549@0.0769775,AG04450@0.0293875,BJ@0.0197635,GM12878@0.08128,H1HESC@0.823863,HELAS3@0.079337,HEPG2@0.0776105,HMEC@0.027113,HSMM@0.0156235,HUVEC@0.030059,K562@0.0832635,MCF7@0.0395075,NHEK@0.009781,NHLF@0.0039335,SKNSHRA@0.102349, 0 0 0 0 ENSG00000235494.1 ENST00000420204.1 chr9:99995483-99997296 2 279 1532 intergenic 0.27 0 0,0,1 0 0,0,0 0 0 0 0 0 0 0 0 0 0 0 chimp,cow,elephant,horse,human,macaque,orangutan, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0.0532185,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000203279.2 ENST00000366109.2 chr9:100000046-100000960 2 576 336 exonic 8.80 0 1,1,1 1 0,0,0 0 0 0 52.5538194444444 31.6607142857143 5.232 53.4496527777778 75.0089285714286 5.328 0 0 chimp,human,macaque,marmoset,orangutan, lincRNA lincRNA A549@0.540452,AG04450@0.340315,BJ@0.184901,GM12878@0.310812,H1HESC@5.72918,HELAS3@1.63662,HEPG2@2.22816,HMEC@0.4463,HSMM@0.079749,HUVEC@0.0953945,K562@0.906286,MCF7@0.276374,NHEK@0.408214,NHLF@0.094034,SKNSHRA@0.773343, 2 44 0 0 ENSG00000228174.1 ENST00000451595.1 chr9:100275319-100278620 3 500 2797 intronic 4.31 0 0,0,0 0 0,0,0 0 0 0 0 0 0 0 0 0 0 0 chimp,human,macaque,marmoset,orangutan, antisense antisense A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0.0069485,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000231521.1 ENST00000437864.1 chr9:100396797-100398333 3 282 1250 intronic 1.68 0 0,0,1 0 0,0,0 0 0 0 0 0 0 0 0 0 0 0 chimp,human,macaque,marmoset,orangutan, antisense antisense A549@0.0217835,AG04450@0.016527,BJ@0.025108,GM12878@0.161036,H1HESC@0,HELAS3@0,HEPG2@0.037379,HMEC@0,HSMM@0,HUVEC@0.0245265,K562@0.024912,MCF7@0.0144285,NHEK@0,NHLF@0.0067705,SKNSHRA@0.0274885, 0 0 0 0 ENSG00000236130.1 ENST00000430058.1 chr9:100568217-100572290 2 202 3869 intergenic -3.77 0 0,0,1 0 0,0,0 22.7623762376238 9.03308348410442 0 145.311881188119 22.3951925562161 2.7 145.420792079208 23.0811579219437 2.72 0 0 chimp,human,macaque,marmoset,orangutan, lincRNA lincRNA A549@0,AG04450@0,BJ@0.023931,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000236896.1 ENST00000411981.1 chr9:100748833-100749938 2 400 703 intronic -8.31 0 0,0,0 0 0,0,0 15.1525 0 0 6.2 0 1.912 6.475 0 2.008 0 0 chimp,dog,human,macaque,marmoset,orangutan, antisense antisense A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0.01998,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000238264.1 ENST00000433997.1 chr9:101609511-101634560 2 351 24696 intronic -2.33 0 0,0,0 0 0,0,0 0 9.70942662779398 7.04 0 8.36289277615808 5.456 0 9.27510528020732 5.698 0 0 chimp,human,macaque,marmoset,orangutan, antisense antisense A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0.013242,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000227269.1 ENST00000450399.1 chr9:101945655-101947173 2 437 1079 intergenic 0.98 0 0,0,0 0 0,0,0 25.7894736842105 22.9786839666358 77.145 16.5011441647597 0 84.828 16.6773455377574 0 84.15 0 0 chimp,elephant,guinea_pig,human,macaque,marmoset,orangutan,panda,pig, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0.0183675,H1HESC@0.0056365,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0.0116313,NHLF@0,SKNSHRA@0.005168, 0 0 0 0 ENSG00000234860.1 ENST00000413271.1 chr9:102293978-102299206 2 417 4809 intergenic 3.28 0 0,0,0 0 0,0,0 0 5.50010397171969 144.53 18.0431654676259 5.98024537325847 193.208 15.0791366906475 8.45061343314618 172.752 0 0 cat,chimp,cow,dog,elephant,horse,human,macaque,marmoset,orangutan,pig, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000237461.1 ENST00000427039.1 chr9:102348068-102582171 7 1537 232554 intergenic -2.50 0 0,1,1 1 0,0,0 56.6402081977879 25.8476009872976 233.804 83.551724137931 29.2083817091944 193.134 94.1379310344828 36.7091428227423 205.539 0 0 chimp,cow,dog,elephant,horse,human,macaque,marmoset,mouse,opossum,orangutan,panda,pig,rabbit, lincRNA processed_transcript A549@0.008435,AG04450@0.0063465,BJ@0.0136505,GM12878@0.0234235,H1HESC@0.057149,HELAS3@0.007468,HEPG2@0.033554,HMEC@0,HSMM@0.016037,HUVEC@0.004527,K562@0.049675,MCF7@0.230541,NHEK@0.00298633,NHLF@0.0188295,SKNSHRA@0.365965, 0 0 0 0 ENSG00000255145.1 ENST00000529965.1 chr9:102648608-102668883 3 541 19730 intergenic -0.51 1 1,1,1 1 0,0,0 0 7.35818550430816 0 0.471349353049908 11.1191079574252 19.75 2.37523105360444 24.4796249366447 28.028 0 0 chimp,dog,horse,human,macaque,marmoset,orangutan, antisense antisense A549@0.165635,AG04450@0.042874,BJ@0.10102,GM12878@0.18693,H1HESC@0.295334,HELAS3@0.278908,HEPG2@0.134572,HMEC@0.045161,HSMM@0.0281085,HUVEC@0,K562@0.31018,MCF7@0.315972,NHEK@0.0572813,NHLF@0.0818575,SKNSHRA@0.534173, 0 0 0 0 ENSG00000254571.1 ENST00000524512.1 chr9:102677359-102692178 2 334 14483 exonic -8.15 0 0,0,1 0 0,0,0 135.089820359281 23.6736863909411 0 187.311377245509 15.101360215425 11.316 206.032934131737 30.8009390319685 12.095 0 0 cat,chimp,cow,dog,elephant,guinea_pig,horse,human,macaque,marmoset,mouse,opossum,orangutan,panda,pig,platypus,rabbit, antisense antisense A549@0.016441,AG04450@0.009597,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0.0253645,HMEC@0,HSMM@0,HUVEC@0.0072365,K562@0.021929,MCF7@0.018086,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000235953.2 ENST00000429562.2 chr9:103115360-103156151 4 2329 38456 intergenic 0.64 0 1,1,1 1 0,0,0 0 0 24.786 0.615714899098325 1.67209278136052 69.118 0.646629454701589 5.33693051799459 74.585 0 0 human, lincRNA lincRNA A549@0.2658,AG04450@0.119512,BJ@0.214833,GM12878@0.290083,H1HESC@1.02352,HELAS3@0.204728,HEPG2@0.281111,HMEC@0.156203,HSMM@0.344587,HUVEC@0.107811,K562@0.33958,MCF7@0.275885,NHEK@0.200524,NHLF@0.301852,SKNSHRA@0.682459, 0 0 0 0 ENSG00000225376.1 ENST00000424154.1 chr9:104230721-104243784 3 391 12668 intronic 2.81 1 0,1,0 0 0,0,0 0 77.4850805178402 0 0 54.2639722134512 0 0 47.9704767919166 0 0 0 chimp,human,macaque,marmoset,orangutan, antisense antisense A549@0.015365,AG04450@0,BJ@0,GM12878@0,H1HESC@0.0317825,HELAS3@0,HEPG2@0.009912,HMEC@0,HSMM@0.0052225,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0.012093, 0 0 0 0 ENSG00000225376.1 ENST00000450109.1 chr9:104230744-104243784 4 534 12500 exonic 3.73 1 0,1,0 0 0,0,0 0 78.52648 0 0 54.99328 0 0 48.6152 0 0 0 chimp,human,macaque,marmoset,orangutan, antisense antisense A549@0.015365,AG04450@0,BJ@0,GM12878@0,H1HESC@0.0317825,HELAS3@0,HEPG2@0.009912,HMEC@0,HSMM@0.0052225,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0.012093, 0 0 0 0 ENSG00000225376.1 ENST00000431507.1 chr9:104231604-104243784 2 437 11741 intronic 1.55 1 0,0,0 0 0,0,0 0 83.6028447321353 0 0 58.1722170172898 4.416 0 51.3641086789882 4.624 0 0 chimp,elephant,human,macaque,marmoset,orangutan, antisense antisense A549@0.015365,AG04450@0,BJ@0,GM12878@0,H1HESC@0.0317825,HELAS3@0,HEPG2@0.009912,HMEC@0,HSMM@0.0052225,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0.012093, 0 0 0 0 ENSG00000225376.1 ENST00000425734.1 chr9:104231661-104243784 3 463 11656 intronic 2.37 1 0,0,0 0 0,0,0 0 84.2125085792725 0 0 58.5964310226493 4.416 0 51.7386753603294 4.624 0 0 chimp,elephant,horse,human,macaque,marmoset,orangutan, antisense antisense A549@0.015365,AG04450@0,BJ@0,GM12878@0,H1HESC@0.0317825,HELAS3@0,HEPG2@0.009912,HMEC@0,HSMM@0.0052225,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0.012093, 0 0 0 0 ENSG00000227889.1 ENST00000448515.1 chr9:105052402-105053194 2 711 79 intergenic 0 0 0,0,0 0 0,0,0 0 0 0 0 0 0 0 0 0 0 0 chimp,human,macaque,marmoset,orangutan, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0.008203,H1HESC@0.011638,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0.0074905,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000225564.1 ENST00000411575.1 chr9:105902805-106087316 10 3728 180765 intergenic -0.15 0 0,0,0 0 0,0,0 0 3.45681962769341 0 0.352736051502146 5.97854673194479 0 0.387607296137339 6.54527701712168 0 0 0 chimp,guinea_pig,human,macaque,marmoset,orangutan,pig,rabbit, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0.0028185,H1HESC@0.00318,HELAS3@0.0011165,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000228795.1 ENST00000425157.1 chr9:106006008-106015452 2 200 9242 intergenic -1.88 0 0,0,0 0 0,0,0 63.4 2.23761090673015 47.55 13.145 4.17160787708288 44.818 15.62 5.23566327634711 55.737 0 0 chimp,human,macaque,marmoset, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000225564.1 ENST00000455051.1 chr9:106026893-106087060 5 583 59576 intergenic 2.88 0 0,0,0 0 0,0,0 0 2.63916677856855 0 0 6.12508392641332 0 0 7.59346045387404 0 0 0 chimp,dog,human,macaque,marmoset,orangutan,rabbit, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0.0028185,H1HESC@0.00318,HELAS3@0.0011165,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000226566.1 ENST00000421507.1 chr9:106124234-106192174 3 525 67411 intergenic -0.60 0 0,0,0 0 0,0,0 0 5.41887822462209 0 30.9409523809524 5.99287950037828 4.302 45.3066666666667 9.38811173250657 4.77 0 0 cat,chimp,cow,dog,elephant,horse,human,macaque,marmoset,mouse,orangutan,panda,pig,rabbit,rat, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000250209.1 ENST00000511183.1 chr9:106842305-106854755 3 7017 5429 intergenic 2.06 0 0,0,0 0 0,0,0 17.5918483682485 2.6494750414441 0 35.8743052586576 7.20445754282557 0 36.5529428530711 10.1803278688525 0 0 1 chimp,human,marmoset, lincRNA lincRNA A549@0.010077,AG04450@0.057423,BJ@0,GM12878@0.015507,H1HESC@0.0341575,HELAS3@0.0092905,HEPG2@0.0072995,HMEC@0,HSMM@0.0008795,HUVEC@0.0045835,K562@0.020748,MCF7@0.007599,NHEK@0.00200033,NHLF@0.033403,SKNSHRA@0.005796, 0 0 0 0 ENSG00000226334.1 ENST00000435915.1 chr9:107689834-107691173 2 467 870 intronic 5.47 0 0,0,1 0 0,0,0 17.237687366167 0 21.28 3.54603854389722 84.2896551724138 46.296 6.25053533190578 112.018390804598 38.811 0 0 chimp,cow,elephant,guinea_pig,horse,human,macaque,marmoset,orangutan,panda,pig, lincRNA processed_transcript A549@0.068013,AG04450@0.126321,BJ@0.353365,GM12878@0,H1HESC@0.141531,HELAS3@0.0801,HEPG2@0.188082,HMEC@0.375413,HSMM@0.042324,HUVEC@0.0160625,K562@0,MCF7@0.0409755,NHEK@0.226819,NHLF@0.0536505,SKNSHRA@0.256099, 0 0 0 0 ENSG00000230013.1 ENST00000457720.1 chr9:107753077-107754062 2 604 379 intergenic -2.27 0 0,1,0 0 0,0,0 41.2334437086093 0 0 24.2632450331126 4.03693931398417 22.952 21.317880794702 4.10026385224274 23.285 0 0 cat,chimp,cow,guinea_pig,human,macaque,marmoset,orangutan,pig, lincRNA lincRNA A549@0.09715,AG04450@0.0195405,BJ@0.029486,GM12878@0,H1HESC@0.0343245,HELAS3@0.0515085,HEPG2@0,HMEC@0.013514,HSMM@0,HUVEC@0,K562@0.034043,MCF7@0.168445,NHEK@0.0172063,NHLF@0.147452,SKNSHRA@0.0555335, 0 0 0 0 ENSG00000228317.1 ENST00000421614.1 chr9:108316316-108320310 3 628 3362 intergenic 1.35 1 1,1,1 1 0,0,0 0 0 0 0 1.82153480071386 22.155 0 5.71058893515764 24.444 0 0 chimp,human,macaque,marmoset, antisense antisense A549@0.0879095,AG04450@0.014208,BJ@0.039314,GM12878@0.835678,H1HESC@0.026682,HELAS3@0.0757075,HEPG2@0.0712905,HMEC@0,HSMM@0.010838,HUVEC@0.034279,K562@0.097679,MCF7@0.0599315,NHEK@0.00417533,NHLF@0.0061845,SKNSHRA@0.168617, 0 0 0 0 ENSG00000225002.1 ENST00000445897.1 chr9:108823635-108827274 2 434 3203 intergenic -3.56 0 0,0,0 0 0,0,0 0 0 9.129 0 1.49235092101155 6.496 0 1.56728067436778 7.949 0 0 chimp,human,marmoset,orangutan, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000234323.1 ENST00000435485.1 chr9:109040673-109367076 7 1679 324712 intergenic 2.12 1 0,1,1 0 0,0,0 12.4949374627755 33.4053930867969 156.445 10.2692078618225 36.3320296139348 101.619 10.237641453246 36.7033093941709 105.893 0 0 chimp,cow,dog,elephant,guinea_pig,horse,human,macaque,marmoset,orangutan,pig,rabbit,rat, lincRNA lincRNA A549@0.0012875,AG04450@0,BJ@0,GM12878@0.874794,H1HESC@0.007857,HELAS3@0,HEPG2@0.001657,HMEC@0.012474,HSMM@0,HUVEC@0,K562@0.0017685,MCF7@0.0330745,NHEK@0.0331763,NHLF@0,SKNSHRA@0.003456, 0 0 0 0 ENSG00000234323.1 ENST00000425709.1 chr9:109213097-109367076 4 1309 152664 intergenic 2.12 1 0,0,1 0 0,0,0 16.0267379679144 23.6441924749777 0 13.1718869365928 28.4499423570718 0 13.131398013751 28.2819066708589 0 0 0 chimp,cow,dog,elephant,guinea_pig,horse,human,macaque,marmoset,orangutan,panda,pig,rabbit,rat, lincRNA lincRNA A549@0.0012875,AG04450@0,BJ@0,GM12878@0.874794,H1HESC@0.007857,HELAS3@0,HEPG2@0.001657,HMEC@0.012474,HSMM@0,HUVEC@0,K562@0.0017685,MCF7@0.0330745,NHEK@0.0331763,NHLF@0,SKNSHRA@0.003456, 0 0 0 0 ENSG00000229297.1 ENST00000430534.1 chr9:109346423-109354233 2 369 7439 intergenic 1.62 0 0,0,0 0 0,0,0 0 42.6272348433929 25.2 27.5853658536585 48.3075682215351 53.876 27.6585365853659 50.0596854415916 53.394 0 0 chimp,dog,horse,human,macaque,marmoset,orangutan,pig,rabbit, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000237062.1 ENST00000446206.1 chr9:109377359-109378087 2 595 131 intergenic -0.26 0 0,0,0 0 0,0,0 281.704201680672 456 490.891 309.117647058824 354.290076335878 469.332 260.557983193277 346.236641221374 476.562 0 0 chimp,cow,dog,elephant,guinea_pig,horse,human,macaque,marmoset,mouse,orangutan,panda,rabbit,rat, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000234229.1 ENST00000444985.1 chr9:109378339-109442079 7 2048 61680 intergenic 0.70 0 0,0,1 0 0,0,0 116.19140625 38.45296692607 336.874 141.8251953125 36.2535992217899 318.342 144.791015625 37.4756971465629 274.659 0 0 chimp,guinea_pig,horse,human,macaque,marmoset,orangutan,panda,pig, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0.130516,H1HESC@0.0071725,HELAS3@0,HEPG2@0.003088,HMEC@0,HSMM@0,HUVEC@0,K562@0.00388,MCF7@0,NHEK@0.0138427,NHLF@0,SKNSHRA@0.009968, 0 0 0 0 ENSG00000234229.1 ENST00000411451.1 chr9:109427031-109464943 4 686 37220 intergenic -3.01 1 0,0,1 0 0,0,0 289.139941690962 20.3642665233745 93.762 189.103498542274 18.1237238044062 5.772 193.922740524781 19.4070929607738 15.913 0 0 chimp,dog,guinea_pig,horse,human,macaque,marmoset,mouse,orangutan,panda,rabbit, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0.130516,H1HESC@0.0071725,HELAS3@0,HEPG2@0.003088,HMEC@0,HSMM@0,HUVEC@0,K562@0.00388,MCF7@0,NHEK@0.0138427,NHLF@0,SKNSHRA@0.009968, 0 0 0 0 ENSG00000230782.1 ENST00000439901.1 chr9:109737114-109865269 5 2272 125875 exonic 3.77 0 0,0,0 0 0,0,0 19.1901408450704 40.2537279046673 48.516 13.1628521126761 38.0196464746773 4.293 13.0721830985915 44.3466057596823 4.546 0 0 chimp,elephant,human,macaque,marmoset,mouse,orangutan, lincRNA processed_transcript A549@0,AG04450@0.0046845,BJ@0,GM12878@0.0347455,H1HESC@0.0058965,HELAS3@0,HEPG2@0.0174395,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0.00261933,NHLF@0,SKNSHRA@0.0009965, 0 0 0 0 ENSG00000230782.1 ENST00000418656.1 chr9:109864325-109865153 2 502 324 intergenic 0 1 0,0,1 0 0,0,0 103.061752988048 0 12.44 162.003984063745 0 2.805 161.099601593625 0 2.992 0 0 cat,chimp,cow,dog,elephant,guinea_pig,horse,human,macaque,marmoset,mouse,orangutan,panda,pig,rabbit,rat, lincRNA processed_transcript A549@0,AG04450@0.0046845,BJ@0,GM12878@0.0347455,H1HESC@0.0058965,HELAS3@0,HEPG2@0.0174395,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0.00261933,NHLF@0,SKNSHRA@0.0009965, 0 0 0 0 ENSG00000226047.1 ENST00000427833.1 chr9:109879740-109883986 3 326 3916 intergenic 2.63 1 0,1,1 0 0,0,0 0 36.3580183861083 0 65.4233128834356 33.8128192032686 0 213.374233128834 38.8432073544433 0 0 0 chimp,cow,human,orangutan, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000226825.1 ENST00000423523.1 chr9:110182565-110193083 4 404 10108 intergenic 0.10 1 0,0,0 0 0,0,0 0 12.6797586070439 0 0 16.2136921250495 4.471 0 16.965670755837 4.505 0 0 chimp,cow,human,macaque,marmoset,orangutan,panda, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000226825.1 ENST00000415302.1 chr9:110189521-110190683 2 205 955 intergenic 0 1 0,0,0 0 0,0,0 0 0 0 0 0 0 0 0 0 0 0 chimp,human,orangutan, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000230030.1 ENST00000453455.1 chr9:111014434-111017100 2 222 2442 intergenic 0 1 0,0,0 0 0,0,0 0 0 0 0 16.48361998362 29.294 0 22.1805896805897 34.619 0 0 chimp,dog,elephant,human,macaque,marmoset,orangutan,pig, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0.005699,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000231678.1 ENST00000415465.1 chr9:111463650-111465372 2 395 1325 intergenic -0.51 0 0,0,0 0 0,0,0 0 10.1011320754717 0 0 0 0 0 0 0 0 0 cat,chimp,cow,dog,elephant,horse,human,macaque,marmoset,orangutan,rabbit, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0.0420565,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000232755.1 ENST00000443348.1 chr9:111633250-111635485 2 1907 326 intronic -2.75 0 0,0,1 0 0,0,0 0 0 0 0 0 6.509 0 0 6.9 0 0 chimp,human,macaque,marmoset,orangutan, sense_intronic sense_intronic A549@0.51936,AG04450@0.0945785,BJ@0.120923,GM12878@0.572349,H1HESC@0.306407,HELAS3@0.889178,HEPG2@4.80627,HMEC@0.935352,HSMM@0.157428,HUVEC@0.38836,K562@0.527722,MCF7@0.471877,NHEK@0.245119,NHLF@0.100129,SKNSHRA@0.289753, 0 0 0 0 ENSG00000230494.1 ENST00000435027.1 chr9:112202342-112203532 2 568 620 intronic -5.48 0 0,0,0 0 0,0,0 0 19.2741935483871 0 8.08098591549296 23.8387096774194 3.107 8.32042253521127 23.8870967741936 3.402 0 0 cat,chimp,cow,dog,horse,human,marmoset,orangutan,panda,pig, sense_intronic sense_intronic A549@1.10393,AG04450@0.033792,BJ@0.0124325,GM12878@0.0010295,H1HESC@0.254984,HELAS3@1.19152,HEPG2@0.846706,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@1.78392,NHEK@0.944374,NHLF@0,SKNSHRA@0.200643, 0 0 0 0 ENSG00000232939.1 ENST00000449258.1 chr9:112522640-112534323 3 475 11204 intronic 20.96 0 0,1,0 0 0,0,0 0 11.8440735451624 89.496 0 19.2142092109961 45.81 0 18.1700285612281 46.243 0 0 chimp,human,macaque,marmoset,orangutan, antisense antisense A549@0,AG04450@0.0347805,BJ@0.00677,GM12878@0,H1HESC@0.00868,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0.052584,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0.0080735,SKNSHRA@0.0095095, 0 0 0 0 ENSG00000232896.1 ENST00000451108.1 chr9:113361755-113367499 3 632 5108 intergenic 4.21 0 0,0,0 0 0,0,0 0 0 0 0 3.19498825371966 0 0 3.81754111198121 0 0 0 chimp,human,macaque,marmoset,mouse,orangutan,rabbit, lincRNA lincRNA A549@0,AG04450@0.0035295,BJ@0,GM12878@0.0073825,H1HESC@0.0894395,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0.012291,SKNSHRA@0, 0 0 0 0 ENSG00000227531.1 ENST00000426204.1 chr9:113901526-114047116 3 741 144845 intergenic -2.68 0 0,1,0 0 0,0,0 0 8.88879146674031 0 14.5141700404858 10.4735268735545 3.459 15.6531713900135 12.2159411785012 8.958 0 0 cat,chimp,cow,elephant,guinea_pig,horse,human,macaque,marmoset,orangutan,panda,pig,rabbit, lincRNA lincRNA A549@0,AG04450@0.007958,BJ@0,GM12878@0.287744,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0.176053,HUVEC@0,K562@0,MCF7@0,NHEK@0.02789,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000224644.1 ENST00000450154.1 chr9:114336472-114337707 2 300 933 intronic 0 0 0,0,0 0 0,0,0 0 35.4126473740622 0 0 37.1479099678457 4.116 0 63.91961414791 4.256 0 0 cat,chimp,cow,elephant,horse,human,macaque,marmoset,orangutan,rabbit, antisense antisense A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000203564.2 ENST00000366375.2 chr9:114680537-114681204 2 482 183 intronic 0 0 0,1,0 0 0,0,0 0 0 0 0 0 0 0 0 3.012 0 0 chimp,guinea_pig,human,macaque,orangutan, antisense antisense A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000226609.1 ENST00000440009.1 chr9:115511182-115512736 2 418 1134 intergenic 7.86 0 0,1,1 0 0,0,0 0 0 28.885 4.57416267942584 0 128.115 4.20334928229665 1.86507936507937 108.947 0 0 chimp,horse,human,macaque,marmoset,orangutan, antisense antisense A549@0.053555,AG04450@0.0941285,BJ@0,GM12878@0.0500695,H1HESC@0.04179,HELAS3@0.245976,HEPG2@0.12336,HMEC@0,HSMM@0.009798,HUVEC@0,K562@0.844936,MCF7@0.107481,NHEK@0.024509,NHLF@0.0046455,SKNSHRA@0.146612, 0 0 0 0 ENSG00000228623.2 ENST00000427548.1 chr9:115759495-115774507 5 2314 12690 intergenic 1.15 0 1,1,1 1 0,0,1 67.1084701815039 3.62048857368006 0 69.400172860847 2.9769109535067 3.346 106.617113223855 30.3055161544523 3.514 0 0 cat,chimp,cow,dog,elephant,guinea_pig,horse,human,macaque,marmoset,mouse,opossum,orangutan,panda,pig,rabbit,rat, lincRNA lincRNA A549@0.502485,AG04450@0.468398,BJ@0.342719,GM12878@0.109296,H1HESC@3.53559,HELAS3@1.02732,HEPG2@1.50528,HMEC@0.441421,HSMM@0.162017,HUVEC@0.065997,K562@0.580581,MCF7@0.010482,NHEK@0.327388,NHLF@0.8592,SKNSHRA@1.13199, 0 0 0 0 ENSG00000225684.3 ENST00000439875.1 chr9:115865618-115873753 2 7378 755 intergenic 5.30 1 0,1,1 0 0,0,0 0 0 0 0 0 0 0 0 0 0 0 human,orangutan, lincRNA processed_transcript A549@0.01265,AG04450@0.0120165,BJ@0.125379,GM12878@0.0018685,H1HESC@0.027862,HELAS3@0.391083,HEPG2@0.148581,HMEC@0.094815,HSMM@2.3302,HUVEC@0.003444,K562@0.177285,MCF7@1.82909,NHEK@0.0240737,NHLF@1.44467,SKNSHRA@0.0282355, 0 0 0 0 ENSG00000225684.3 ENST00000423546.1 chr9:115867003-115873780 3 5626 1147 intergenic 5.30 1 0,0,0 0 0,0,0 0 0 0 0 0 0 0 0 0 0 0 chimp,human,orangutan, lincRNA processed_transcript A549@0.01265,AG04450@0.0120165,BJ@0.125379,GM12878@0.0018685,H1HESC@0.027862,HELAS3@0.391083,HEPG2@0.148581,HMEC@0.094815,HSMM@2.3302,HUVEC@0.003444,K562@0.177285,MCF7@1.82909,NHEK@0.0240737,NHLF@1.44467,SKNSHRA@0.0282355, 0 0 0 0 ENSG00000231528.2 ENST00000453010.1 chr9:115875353-115882126 3 5622 1147 intergenic 5.30 1 0,0,0 0 0,0,0 0 0 0 0 0 0 0 0 0 0 0 chimp,human,orangutan, lincRNA processed_transcript A549@0.014402,AG04450@0.0171,BJ@0.135468,GM12878@0.0018705,H1HESC@0.03234,HELAS3@0.449824,HEPG2@0.164102,HMEC@0.115441,HSMM@2.4685,HUVEC@0.003976,K562@0.214501,MCF7@1.94788,NHEK@0.024493,NHLF@1.3994,SKNSHRA@0.0329835, 0 0 0 0 ENSG00000231528.2 ENST00000434051.1 chr9:115875353-115882208 2 6098 755 intergenic 5.30 1 0,0,0 0 0,0,0 0 0 0 0 0 0 0 0 0 0 0 human,orangutan, lincRNA processed_transcript A549@0.014402,AG04450@0.0171,BJ@0.135468,GM12878@0.0018705,H1HESC@0.03234,HELAS3@0.449824,HEPG2@0.164102,HMEC@0.115441,HSMM@2.4685,HUVEC@0.003976,K562@0.214501,MCF7@1.94788,NHEK@0.024493,NHLF@1.3994,SKNSHRA@0.0329835, 0 0 0 0 ENSG00000237073.1 ENST00000428429.1 chr9:116332470-116352299 3 392 19433 intronic 7.51 1 0,0,0 0 0,0,0 0 18.2574486697885 0 21.6887755102041 21.6692739155046 10.73 21.8214285714286 24.146966500283 24.923 0 0 chimp,human,marmoset,orangutan, antisense antisense A549@0.040652,AG04450@0.005962,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0.387535,K562@0.006218,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0.012794, 0 0 0 0 ENSG00000233817.1 ENST00000437712.1 chr9:116381508-116384914 2 3041 363 intergenic 4.14 0 0,1,0 0 0,0,0 61.4653074646498 0 0 63.463334429464 11.2396694214876 0 64.7642222952976 11.6804407713499 0 0 0 chimp,cow,elephant,horse,human,macaque,marmoset,orangutan,panda,pig, lincRNA processed_transcript A549@0.0128985,AG04450@0.0294655,BJ@0.045093,GM12878@0.001325,H1HESC@0.0114765,HELAS3@0.0164605,HEPG2@0.030637,HMEC@0.002691,HSMM@0.115131,HUVEC@0.174538,K562@0,MCF7@0,NHEK@0,NHLF@0.056105,SKNSHRA@0.011886, 0 0 0 0 ENSG00000227482.1 ENST00000428292.1 chr9:116413236-116445135 3 1220 30675 intergenic 6.68 1 1,1,1 1 0,0,0 6.30163934426229 13.3683455582722 42.485 6.00655737704918 15.9296169519152 0 6.06311475409836 15.6896169519152 0 0 0 chimp,cow,elephant,human,macaque,marmoset,orangutan, lincRNA lincRNA A549@0.0738125,AG04450@0.086478,BJ@0.078735,GM12878@0.0248535,H1HESC@0.0268785,HELAS3@0.085325,HEPG2@0.295546,HMEC@0,HSMM@0.2329,HUVEC@0.31692,K562@0,MCF7@0.031644,NHEK@0.00955767,NHLF@0.0790975,SKNSHRA@0.217089, 0 0 0 0 ENSG00000235119.1 ENST00000448674.1 chr9:117159004-117160783 2 171 1606 intergenic -1.17 0 0,1,0 1 0,0,0 89.8830409356725 59.181195516812 4.505 122.491228070175 59.9003735990037 19.414 121.140350877193 60.5386052303861 19.757 0 0 cat,chimp,cow,dog,elephant,guinea_pig,human,macaque,marmoset,orangutan,panda,rat, lincRNA lincRNA A549@0.0605545,AG04450@0.05439,BJ@0.0553505,GM12878@0.0957675,H1HESC@0.0314815,HELAS3@0.100785,HEPG2@0.0756455,HMEC@0,HSMM@0,HUVEC@0,K562@0.029952,MCF7@0.14212,NHEK@0,NHLF@0,SKNSHRA@0.026252, 0 0 0 0 ENSG00000230054.1 ENST00000423632.1 chr9:117418584-117420052 2 434 1032 intergenic 8.89 0 0,1,0 0 0,0,0 0 0 0 102.661290322581 3.29457364341085 12.751 104.202764976959 5.0406976744186 12.757 0 0 cat,cow,dog,elephant,guinea_pig,horse,human,macaque,marmoset,mouse,orangutan,panda,pig,rabbit,rat, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000230054.1 ENST00000415101.1 chr9:117418584-117424654 2 402 5666 intergenic 8.89 0 0,0,0 0 0,0,0 0 0 0 102.074626865672 4.07747970349453 7.932 103.68407960199 4.42410871867278 7.924 0 0 cat,cow,dog,elephant,guinea_pig,horse,human,macaque,marmoset,mouse,orangutan,panda,pig,rabbit,rat, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000230601.1 ENST00000436752.1 chr9:117428716-117434029 4 546 4761 intergenic 0.43 0 0,1,1 0 0,0,1 5.47619047619048 1.11111111111111 0 149.071428571429 3.95946229783659 3.923 131.628205128205 4.03969754253308 4.889 0 0 cat,chimp,cow,guinea_pig,horse,human,marmoset,orangutan,pig,rabbit, lincRNA lincRNA A549@0.0251105,AG04450@0,BJ@0.0044765,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0.029779,HSMM@0.019109,HUVEC@0,K562@0,MCF7@0.084738,NHEK@0.009284,NHLF@0,SKNSHRA@0.016515, 0 0 0 0 ENSG00000236461.1 ENST00000423637.1 chr9:117881818-117900688 6 1519 17341 intergenic 2.22 1 0,0,0 0 0,0,0 0 9.88322472752436 0 28.5049374588545 14.4461103742575 0 30.1711652402897 14.1671183899429 0 0 0 chimp,elephant,guinea_pig,human,macaque,marmoset,orangutan, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0.0092225,H1HESC@0,HELAS3@0.0034805,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0.00675,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000234692.1 ENST00000444701.1 chr9:118014817-118016530 3 424 1285 intronic 0.12 0 0,0,1 0 0,0,0 0 0 45.9 0 0 17.781 0 0 18.257 0 0 chimp,cow,dog,horse,human,macaque,marmoset,orangutan,panda, lincRNA lincRNA A549@0.02088,AG04450@0,BJ@0.0151575,GM12878@0,H1HESC@0.458104,HELAS3@0,HEPG2@0,HMEC@0.038357,HSMM@0.0289125,HUVEC@0,K562@0,MCF7@0,NHEK@0.0899087,NHLF@0,SKNSHRA@0.0053135, 0 0 0 0 ENSG00000197486.3 ENST00000543454.1 chr9:118235807-118353358 3 1672 115875 intergenic 4.95 0 0,0,0 0 0,0,0 0 1.59346709816613 9.02 0 3.88844012944984 1.434 0 4.24432362459547 6.945 1 1 chimp,human,macaque,marmoset,orangutan, lincRNA lincRNA A549@0,AG04450@0.00385,BJ@0.0028895,GM12878@0,H1HESC@0.651417,HELAS3@0.003169,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0.0092815,MCF7@0,NHEK@0,NHLF@0.001165,SKNSHRA@0.053923, 0 0 0 0 ENSG00000228714.1 ENST00000433546.1 chr9:118501942-118506511 3 386 4179 intergenic -1.82 0 0,0,1 0 0,0,0 41.2383419689119 10.1708542713568 29.941 74.8523316062176 10.8195740607801 91.732 86.6761658031088 13.6499162479062 105.366 0 0 chimp,cow,dog,human,macaque,marmoset,orangutan,panda,pig, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0.0419545, 0 0 0 0 ENSG00000204148.3 ENST00000374014.3 chr9:118650448-118687486 3 766 36268 intergenic 3.23 0 0,0,0 0 0,0,0 38.9660574412533 11.9663891033418 0 9.2976501305483 12.2694937686114 0 8.9177545691906 12.4747987206353 0 0 0 cat,chimp,dog,horse,human,macaque,marmoset,orangutan,panda, lincRNA lincRNA A549@0,AG04450@0.0100225,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000228707.1 ENST00000416507.1 chr9:118774640-118775244 2 507 95 intergenic -4.23 0 0,0,0 0 0,0,0 0 0 6.6 0 0 5.981 0 0 6.191 0 0 chimp,human,macaque,orangutan, lincRNA lincRNA A549@0.0480405,AG04450@0.37573,BJ@0.009674,GM12878@0,H1HESC@0.0571765,HELAS3@0.079905,HEPG2@0,HMEC@0,HSMM@0.017042,HUVEC@0,K562@0,MCF7@0,NHEK@0.007524,NHLF@0.0152485,SKNSHRA@0.0109265, 0 0 0 0 ENSG00000224684.1 ENST00000436470.1 chr9:118969286-118970488 2 667 533 intronic -3.66 0 0,0,1 0 0,0,0 0 156.187617260788 11.66 10.9160419790105 203.836772983114 8.439 20.2968515742129 205.634146341463 8.499 0 0 cat,chimp,cow,dog,elephant,guinea_pig,horse,human,macaque,marmoset,mouse,orangutan,panda,pig,rabbit, antisense antisense A549@0,AG04450@0.0192795,BJ@0,GM12878@0,H1HESC@0.0130505,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0.081354, 0 0 0 0 ENSG00000226604.2 ENST00000438048.1 chr9:119048108-119051048 2 1852 1086 intronic 1.64 0 0,0,0 0 0,0,0 104.977321814255 0 18.445 70.4271058315335 0 2.43 72.1981641468682 0 5.628 0 0 cat,chimp,elephant,horse,human,macaque,marmoset,orangutan,panda, antisense antisense A549@0.0092785,AG04450@0.002948,BJ@0.0013055,GM12878@0.0011915,H1HESC@0.027675,HELAS3@0.003242,HEPG2@0,HMEC@0,HSMM@0.004559,HUVEC@0,K562@0.002888,MCF7@0,NHEK@0.00597733,NHLF@0,SKNSHRA@0.117863, 0 0 0 0 ENSG00000244757.1 ENST00000451100.1 chr9:119050897-119080968 4 724 29341 intronic 2.81 0 0,0,0 0 0,0,0 95.9267955801105 25.526498756007 238.578 41.5165745856354 33.8960839780512 229.76 40.8853591160221 36.2420503731979 231.937 0 0 chimp,elephant,guinea_pig,horse,human,macaque,marmoset,mouse,orangutan,panda,pig,rabbit, antisense antisense A549@0.0127915,AG04450@0,BJ@0.0177805,GM12878@0.009017,H1HESC@0.0327695,HELAS3@0.0178705,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0.263153, 0 0 0 0 ENSG00000229105.1 ENST00000418250.1 chr9:119266562-119324572 12 1744 56244 intronic 11.11 0 0,0,0 0 0,0,0 39.2947247706422 12.2916577768295 0 44.8136467889908 14.2375720076808 82.42 47.3704128440367 16.2839591778679 61.792 0 0 chimp,cow,elephant,horse,human,macaque,marmoset,orangutan, antisense antisense A549@0.0035355,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0.0060455,HEPG2@0.0012135,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000230894.1 ENST00000423715.1 chr9:119330728-119348607 3 4993 12882 intronic 1.33 1 0,0,0 0 0,0,0 17.7822952132986 43.5817419655333 0 24.3308632084919 50.9769445738239 5.83 33.3398758261566 50.1947678931843 7.645 0 0 chimp,human,macaque,marmoset,orangutan, antisense antisense A549@0.168643,AG04450@0,BJ@0,GM12878@0,H1HESC@0.0011895,HELAS3@0,HEPG2@0.0088335,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000233516.1 ENST00000436524.1 chr9:120224572-120228538 2 749 3215 intergenic -0.78 0 0,1,0 0 0,0,0 0 108.911975116641 0 3.06408544726302 74.3822706065319 5.785 3.11214953271028 64.4590979782271 17.439 0 0 cat,chimp,elephant,horse,human,macaque,marmoset,panda,pig, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0.019103,HEPG2@0.025425,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000233569.1 ENST00000450938.1 chr9:120410884-120419305 6 1293 7118 intergenic -6.67 1 0,0,0 0 0,0,0 0 13.1059286316381 0 8.7277648878577 19.6022759202023 0 10.1252900232019 22.3714526552402 0 0 0 chimp,human,macaque,marmoset,orangutan,panda,pig, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0.0198605,HEPG2@0.00335,HMEC@0,HSMM@0.0035095,HUVEC@0.007487,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000228512.1 ENST00000421509.1 chr9:120545726-120630349 3 520 84099 intergenic -0.69 0 0,0,0 0 0,0,0 0 23.3682802411444 5.016 0 27.8035886276888 51.601 0 29.00211655311 46.783 0 0 chimp,cow,dog,elephant,horse,human,macaque,marmoset,orangutan,panda,pig, lincRNA lincRNA A549@0,AG04450@0,BJ@0.009415,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0.00416,HMEC@0,HSMM@0.0213685,HUVEC@0,K562@0,MCF7@0.0039315,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000231901.1 ENST00000449730.1 chr9:120602600-120659534 4 621 56307 intergenic 0.50 0 0,0,0 0 0,0,0 0 14.1240520716785 0 0 20.9054469248939 0 0 22.2033494947342 0 0 0 cat,chimp,cow,dog,horse,human,macaque,marmoset,orangutan, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0.0408045,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000225050.1 ENST00000450292.1 chr9:121450030-121468238 2 384 17822 intergenic -0.90 1 0,0,0 0 0,0,0 0 21.883009763214 0 0 24.056278756593 53.615 0 25.3128156211424 79.503 0 0 chimp,dog,human,marmoset,orangutan,panda, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0.010661,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000235201.1 ENST00000456032.1 chr9:121502841-121507590 2 254 4493 intergenic -1.68 0 0,0,1 0 0,0,0 0 11.225016692633 0 0 31.3273981749388 0 0 34.6243044736256 0 0 0 chimp,horse,human,macaque, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000225960.1 ENST00000454204.1 chr9:122735372-122736600 3 379 845 intergenic -1.46 0 0,0,0 0 0,0,0 20.1846965699208 0 230.234 0 0 175.314 0 0 187.91 0 0 chimp,elephant,horse,human,macaque,marmoset,orangutan,rabbit, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0.023339,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000214654.4 ENST00000437707.1 chr9:123555829-123560910 2 428 4651 intergenic 0 0 0,1,0 1 0,0,0 70.8504672897196 17.7338206837239 130.512 60.8504672897196 20.1438400344012 158.84 69.4275700934579 22.00817028596 153.41 0 0 cat,chimp,human,macaque,marmoset,orangutan,panda, processed_transcript processed_transcript A549@1.2436,AG04450@0.546224,BJ@0.552072,GM12878@0.946303,H1HESC@1.04966,HELAS3@0.564951,HEPG2@0.526068,HMEC@0.148476,HSMM@1.06246,HUVEC@0.139278,K562@2.01592,MCF7@0.89627,NHEK@0.984214,NHLF@0.392203,SKNSHRA@1.01773, 0 0 0 0 ENSG00000214654.4 ENST00000540063.1 chr9:123560546-123561845 2 1012 285 intergenic -5.54 0 0,1,0 0 0,0,0 497.886363636364 16.8 10.516 364.5 6.63859649122807 34.782 366.191699604743 3.81052631578947 38.386 0 0 cat,chimp,cow,elephant,guinea_pig,horse,human,macaque,marmoset,mouse,opossum,orangutan,panda,platypus,rabbit,rat, processed_transcript processed_transcript A549@1.2436,AG04450@0.546224,BJ@0.552072,GM12878@0.946303,H1HESC@1.04966,HELAS3@0.564951,HEPG2@0.526068,HMEC@0.148476,HSMM@1.06246,HUVEC@0.139278,K562@2.01592,MCF7@0.89627,NHEK@0.984214,NHLF@0.392203,SKNSHRA@1.01773, 0 0 0 0 ENSG00000226752.1 ENST00000442982.1 chr9:123605378-123614881 4 1966 7531 intergenic 9.37 0 1,1,1 1 0,0,0 0 7.68556632585314 52.164 31.263987792472 7.59460894967468 61.402 28.676500508647 10.1866949940247 60.971 0 0 chimp,elephant,horse,human,macaque,marmoset,orangutan, lincRNA processed_transcript A549@4.9747,AG04450@3.82052,BJ@2.7429,GM12878@5.0107,H1HESC@2.94871,HELAS3@11.1017,HEPG2@2.72515,HMEC@0.675392,HSMM@1.88876,HUVEC@2.3508,K562@21.6719,MCF7@10.0085,NHEK@1.52247,NHLF@1.55363,SKNSHRA@5.17286, 0 0 0 0 ENSG00000226752.1 ENST00000458394.1 chr9:123606578-123607554 2 882 92 intergenic 2.73 0 0,1,1 0 0,0,0 16.6666666666667 0 4.8 0 0 0 21.5702947845805 0 12.458 0 0 cat,chimp,cow,dog,elephant,guinea_pig,horse,human,macaque,marmoset,orangutan,panda, lincRNA processed_transcript A549@4.9747,AG04450@3.82052,BJ@2.7429,GM12878@5.0107,H1HESC@2.94871,HELAS3@11.1017,HEPG2@2.72515,HMEC@0.675392,HSMM@1.88876,HUVEC@2.3508,K562@21.6719,MCF7@10.0085,NHEK@1.52247,NHLF@1.55363,SKNSHRA@5.17286, 0 0 0 0 ENSG00000226752.1 ENST00000447891.1 chr9:123607152-123616651 3 3516 5979 intergenic 6.56 1 0,0,1 0 0,0,0 0 6.36895801973574 19.8 17.4815130830489 9.56598093326643 0 16.0346985210466 7.97474494062552 29.035 0 0 chimp,horse,human,macaque,marmoset,orangutan, lincRNA processed_transcript A549@4.9747,AG04450@3.82052,BJ@2.7429,GM12878@5.0107,H1HESC@2.94871,HELAS3@11.1017,HEPG2@2.72515,HMEC@0.675392,HSMM@1.88876,HUVEC@2.3508,K562@21.6719,MCF7@10.0085,NHEK@1.52247,NHLF@1.55363,SKNSHRA@5.17286, 0 0 0 0 ENSG00000226752.1 ENST00000432640.1 chr9:123607927-123613996 3 716 5349 intergenic 6.56 0 0,0,0 0 0,0,0 0 7.11908767994018 0 83.3519553072626 10.6926528323051 0 72.7304469273743 8.91400261731165 12.641 0 0 cat,chimp,cow,dog,elephant,horse,human,macaque,panda,pig, lincRNA processed_transcript A549@4.9747,AG04450@3.82052,BJ@2.7429,GM12878@5.0107,H1HESC@2.94871,HELAS3@11.1017,HEPG2@2.72515,HMEC@0.675392,HSMM@1.88876,HUVEC@2.3508,K562@21.6719,MCF7@10.0085,NHEK@1.52247,NHLF@1.55363,SKNSHRA@5.17286, 0 0 0 0 ENSG00000226752.1 ENST00000450803.1 chr9:123608960-123614245 3 909 4372 intergenic 6.56 0 0,0,0 0 0,0,0 0 0 38.08 67.6182618261826 10.5386550777676 11.12 59.3289328932893 7.5192131747484 14.807 0 0 chimp,dog,elephant,horse,human,macaque,marmoset,orangutan,panda,pig,rabbit, lincRNA processed_transcript A549@4.9747,AG04450@3.82052,BJ@2.7429,GM12878@5.0107,H1HESC@2.94871,HELAS3@11.1017,HEPG2@2.72515,HMEC@0.675392,HSMM@1.88876,HUVEC@2.3508,K562@21.6719,MCF7@10.0085,NHEK@1.52247,NHLF@1.55363,SKNSHRA@5.17286, 0 0 0 0 ENSG00000248233.1 ENST00000507541.1 chr9:124053715-124057566 2 2092 1757 intronic 5.23 0 1,1,1 0 0,0,0 0 0 100.751 1.67734225621415 21.2373363688105 41.052 1.68785850860421 21.4388161639158 46.199 1 1 chimp,human,macaque,marmoset,orangutan, lincRNA lincRNA A549@0.047919,AG04450@0.005077,BJ@0,GM12878@0,H1HESC@0.0075655,HELAS3@0.201949,HEPG2@0.704905,HMEC@0,HSMM@0.001965,HUVEC@0,K562@0.023158,MCF7@0.024177,NHEK@0.00243833,NHLF@0.0055285,SKNSHRA@0.04921, 0 0 0 0 ENSG00000227355.1 ENST00000440807.1 chr9:124137519-124214455 3 437 76495 intergenic 0 0 0,1,0 0 0,0,0 25.395881006865 5.40822275965749 23.12 21.766590389016 8.06165108830643 8.375 23.116704805492 11.7159291456958 13.977 0 0 cat,chimp,cow,elephant,guinea_pig,horse,human,macaque,marmoset,orangutan,panda,rabbit, antisense antisense A549@0.0253205,AG04450@0.0073285,BJ@0.0055955,GM12878@0,H1HESC@0.006754,HELAS3@0.0284595,HEPG2@0.0048425,HMEC@0,HSMM@0,HUVEC@0,K562@0.166324,MCF7@0.027416,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000229854.1 ENST00000434375.1 chr9:124337170-124338493 2 660 661 intronic 5.03 0 0,0,0 0 0,0,0 0 0 0 0 0 8.12 0 0 8.13 0 0 chimp,dog,horse,human,macaque,marmoset,panda, antisense antisense A549@0,AG04450@0,BJ@0.0036555,GM12878@0,H1HESC@0.0089785,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0.003433, 0 0 0 0 ENSG00000237548.1 ENST00000411790.1 chr9:124646915-124725998 2 1050 78031 intronic 1.30 0 1,1,1 0 0,0,0 0 12.8305288923633 0 15.3771428571429 18.7862644333662 4.208 21.907619047619 22.4292012149018 0 0 0 chimp,cow,dog,guinea_pig,horse,human,macaque,marmoset,orangutan, lincRNA processed_transcript A549@0,AG04450@0.0150275,BJ@0.038243,GM12878@0.0129675,H1HESC@0,HELAS3@0.008821,HEPG2@0.007961,HMEC@0.188339,HSMM@0.0107365,HUVEC@0.0504,K562@0,MCF7@0.012063,NHEK@0.402782,NHLF@0.006336,SKNSHRA@0.0183515, 0 0 0 0 ENSG00000233616.1 ENST00000439471.1 chr9:125163249-125165185 2 295 1639 intergenic 0 0 0,0,0 0 0,0,0 0 0 0 0 1.44417327638804 8.889 0 1.45515558267236 9.149 0 0 chimp,elephant,human,macaque,marmoset,orangutan,panda, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000229245.1 ENST00000433572.1 chr9:125165686-125211256 6 824 44736 intergenic -0.86 0 0,1,1 0 0,0,0 0 0.690048283261803 0 0 2.5233145565093 2.367 0 3.35979971387697 2.385 0 0 chimp,human,macaque,marmoset,orangutan, antisense antisense A549@0.568121,AG04450@0,BJ@0.0029155,GM12878@0,H1HESC@0,HELAS3@0.0027225,HEPG2@0.0131455,HMEC@0,HSMM@0,HUVEC@0.006515,K562@0,MCF7@0,NHEK@0.00318133,NHLF@0.0352625,SKNSHRA@0.055737, 0 0 0 0 ENSG00000248142.1 ENST00000509547.1 chr9:125226304-125231465 2 1349 3810 intergenic 5.41 0 0,1,0 0 0,0,0 0 0 0 0 0 0 0 0 0 0 1 chimp,human,orangutan, lincRNA lincRNA A549@3.15346,AG04450@0.050586,BJ@0.18514,GM12878@1.22569,H1HESC@0.0509575,HELAS3@0.142055,HEPG2@0.143865,HMEC@0.139417,HSMM@0,HUVEC@0.0044055,K562@0.034647,MCF7@0.461585,NHEK@0.0826153,NHLF@0.170246,SKNSHRA@0.932239, 0 0 0 0 ENSG00000231465.1 ENST00000412262.1 chr9:125233637-125238096 3 255 4200 intergenic -9.22 0 0,0,0 0 0,0,0 0 0 0 0 0 0 0 1.98571428571429 0 0 0 chimp,human,macaque,orangutan, antisense antisense A549@0.197187,AG04450@0,BJ@0.134809,GM12878@0.024712,H1HESC@0,HELAS3@0.0161785,HEPG2@0.022712,HMEC@0,HSMM@0,HUVEC@0.011535,K562@0,MCF7@0.0077925,NHEK@0.0536177,NHLF@0,SKNSHRA@0.030012, 0 0 0 0 ENSG00000234156.1 ENST00000431442.1 chr9:125372194-125401957 3 348 29411 encompassing -7.36 0 0,0,1 0 0,0,0 0 13.7729420964945 0 0 12.5041311074088 5.862 0 9.76566590731359 6.056 0 0 cat,chimp,elephant,horse,human,macaque,marmoset,orangutan, processed_transcript processed_transcript A549@0.11056,AG04450@0,BJ@0.035071,GM12878@0.015293,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0.0103335,SKNSHRA@0.138431, 0 0 0 0 ENSG00000234156.1 ENST00000419604.1 chr9:125381637-125401964 4 493 19828 encompassing 3.15 0 0,0,1 0 0,0,0 0 6.91733911640105 0 0 9.11877143433528 0 0 7.31642122251362 0 0 0 chimp,horse,human,orangutan, processed_transcript processed_transcript A549@0.11056,AG04450@0,BJ@0.035071,GM12878@0.015293,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0.0103335,SKNSHRA@0.138431, 0 0 0 0 ENSG00000236901.2 ENST00000449175.1 chr9:125871773-125877756 1 5983 0 intergenic 2.64 1 0,1,1 0 0,1,0 41.9562092595688 0 0 23.4449272939997 0 0 22.4937322413505 0 0 0 1 chimp,human,marmoset,orangutan, processed_transcript ncrna_host A549@0.924616,AG04450@0.124868,BJ@0.047712,GM12878@1.83838,H1HESC@8.82016,HELAS3@1.1968,HEPG2@1.82275,HMEC@0.264844,HSMM@0.121786,HUVEC@0.74293,K562@3.72365,MCF7@3.81801,NHEK@0.243574,NHLF@0.114683,SKNSHRA@0.864167, 0 0 0 0 ENSG00000236901.2 ENST00000545631.1 chr9:125871780-125873444 1 1664 0 intergenic 2.00 1 0,0,1 0 0,1,0 150.530649038462 0 0 82.0564903846154 0 0 77.4417067307692 0 0 1 1 chimp,human,macaque,marmoset,orangutan, processed_transcript ncrna_host A549@0.924616,AG04450@0.124868,BJ@0.047712,GM12878@1.83838,H1HESC@8.82016,HELAS3@1.1968,HEPG2@1.82275,HMEC@0.264844,HSMM@0.121786,HUVEC@0.74293,K562@3.72365,MCF7@3.81801,NHEK@0.243574,NHLF@0.114683,SKNSHRA@0.864167, 0 0 0 0 ENSG00000237336.1 ENST00000458025.1 chr9:126254163-126255435 2 720 550 intronic 1.63 0 0,0,0 0 0,0,0 121.288888888889 56.5854545454545 0 164.055555555556 17.5854545454545 0 163.547222222222 21.6490909090909 0 0 0 cat,chimp,guinea_pig,horse,human,macaque,marmoset,orangutan,panda,pig, antisense antisense A549@0,AG04450@0.0178645,BJ@0,GM12878@0,H1HESC@0.0164645,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000230826.1 ENST00000423942.1 chr9:126498716-126514220 2 786 14716 intronic -0.62 0 0,0,0 0 0,0,0 0.797709923664122 108.802731720576 0 0 102.943802663767 0 2.09287531806616 102.610831747758 2.187 0 0 cat,chimp,cow,dog,horse,human,macaque,marmoset,orangutan,panda,pig, antisense antisense A549@0,AG04450@0,BJ@0,GM12878@0.017873,H1HESC@0,HELAS3@0,HEPG2@0.034616,HMEC@0,HSMM@0,HUVEC@0.0044355,K562@0.0067955,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000236668.1 ENST00000453529.1 chr9:126769954-126771516 2 587 973 intergenic -1.80 0 1,1,1 0 0,0,0 221.020442930153 484.156217882837 134.232 322.296422487223 607.394655704008 52.749 283.63202725724 599.34224049332 52.371 0 0 chimp,cow,dog,elephant,guinea_pig,horse,human,macaque,marmoset,mouse,orangutan,panda,pig,rabbit,rat, lincRNA processed_transcript A549@0.009379,AG04450@0,BJ@0,GM12878@0.240925,H1HESC@0,HELAS3@0.038138,HEPG2@0.004631,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0.0517425,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000231227.1 ENST00000421041.1 chr9:126772809-126773393 2 458 124 intergenic -1.91 0 0,1,0 1 0,0,0 0 0 134.232 10.1069868995633 0 52.749 10.056768558952 0 52.371 0 0 cat,chimp,cow,dog,elephant,guinea_pig,horse,human,macaque,marmoset,orangutan,panda,pig,rabbit, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@1.60875,H1HESC@0,HELAS3@0.093835,HEPG2@0.0177895,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000234921.1 ENST00000429482.1 chr9:126793903-126794803 3 578 318 exonic -5.41 1 0,1,0 0 0,0,0 98.2508650519031 0 425.971 92.4636678200692 0 488.491 103.358131487889 0 500.352 0 0 chimp,cow,human,macaque,marmoset,orangutan, antisense antisense A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000235204.1 ENST00000426157.1 chr9:127021529-127023435 2 306 1598 intronic -4.79 0 0,1,0 0 0,0,0 65.2549019607843 113.645181476846 140.964 122.741830065359 95.744055068836 121.771 126.68954248366 94.2365456821026 110.653 0 0 chimp,guinea_pig,horse,human,marmoset, antisense antisense A549@0,AG04450@0.076894,BJ@0,GM12878@0.0750865,H1HESC@0,HELAS3@0,HEPG2@0.0259425,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000227200.1 ENST00000437461.1 chr9:127025155-127028088 2 371 2560 intronic 8.45 1 0,1,0 0 0,0,0 49.4878706199461 6.752734375 186.336 14.2641509433962 5.42578125 120.418 17.2830188679245 6.735546875 116.448 0 0 chimp,cow,horse,human,marmoset,orangutan, sense_intronic sense_intronic A549@0.0327625,AG04450@0.0865895,BJ@0.212472,GM12878@0.031663,H1HESC@0.0040135,HELAS3@0.063686,HEPG2@0.018761,HMEC@0,HSMM@0,HUVEC@0.106886,K562@0.0085615,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0.045722, 0 0 0 0 ENSG00000234236.1 ENST00000451007.1 chr9:127103208-127103792 2 537 45 intronic -3.34 0 0,1,0 0 0,0,0 0 0 0 0 0 0 0 0 0 0 0 chimp,human,macaque,marmoset,orangutan, antisense antisense A549@0.0223245,AG04450@0.173873,BJ@0.133082,GM12878@0.254553,H1HESC@0.006347,HELAS3@0.132729,HEPG2@0.133246,HMEC@0,HSMM@0.120027,HUVEC@0.162056,K562@0.022347,MCF7@0.20845,NHEK@0.086673,NHLF@0.151889,SKNSHRA@0.0581305, 0 0 0 0 ENSG00000231149.1 ENST00000369027.3 chr9:127277217-127278335 2 264 852 intergenic 0 0 0,0,0 0 0,0,0 0 56.4084507042253 76.14 0 62.8544600938967 86.18 0 70.6514084507042 82.598 0 0 NA antisense antisense A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000224020.1 ENST00000429139.1 chr9:127420746-127460910 2 660 39502 intronic 3.13 0 1,1,1 0 0,0,0 313.854545454545 35.0548832970482 332.276 300.259090909091 38.4339020809073 267.453 285.686363636364 41.9860766543466 256.411 0 0 cat,chimp,cow,dog,elephant,guinea_pig,horse,human,macaque,marmoset,mouse,orangutan,panda,pig,rabbit, antisense non_coding A549@0.616318,AG04450@0.643385,BJ@0.983494,GM12878@1.85845,H1HESC@0.017535,HELAS3@1.12982,HEPG2@0.344783,HMEC@0.059067,HSMM@0.487324,HUVEC@0.6092,K562@0.0146375,MCF7@0,NHEK@0.172744,NHLF@0.032225,SKNSHRA@0.973479, 0 0 0 0 ENSG00000229850.1 ENST00000446468.1 chr9:127431666-127432491 2 253 570 intronic -9.88 0 0,0,1 0 0,0,0 0 0 7.59 0 0 24.842 0 11.6701754385965 26.171 0 0 chimp,human,macaque,marmoset,orangutan, sense_intronic sense_intronic A549@0.0271165,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0.0366215,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000236643.1 ENST00000438380.1 chr9:127532402-127535206 3 614 2186 intronic 1.75 0 0,0,1 0 0,0,0 41.9934853420195 109.623970722781 329.734 69.0065146579805 137.57593778591 365.981 55.7736156351792 115.534766697164 324.316 0 0 chimp,cow,guinea_pig,human,macaque,marmoset,orangutan,panda,pig,rat, antisense antisense A549@0.120947,AG04450@0.036155,BJ@0,GM12878@0.007066,H1HESC@0.0600405,HELAS3@0.091704,HEPG2@0.041584,HMEC@0.013273,HSMM@0.0070295,HUVEC@0.0048235,K562@0.101252,MCF7@0.150823,NHEK@0.018762,NHLF@0,SKNSHRA@0.065273, 0 0 0 0 ENSG00000230396.1 ENST00000438206.1 chr9:127885377-127886583 2 881 323 intronic -3.94 0 0,0,1 0 0,0,0 0 0 10.416 6.23950056753689 0 2.39 6.41657207718502 0 2.43 0 0 chimp,dog,horse,human,macaque,marmoset,orangutan,panda,pig, sense_intronic sense_intronic A549@0.013011,AG04450@0.059647,BJ@0.0045415,GM12878@0.0789925,H1HESC@0.065921,HELAS3@0.0641235,HEPG2@0.0282765,HMEC@0,HSMM@0.0021605,HUVEC@0.0344545,K562@0.127922,MCF7@0.0291735,NHEK@0.0237613,NHLF@0.0049155,SKNSHRA@0.013405, 0 0 0 0 ENSG00000239705.1 ENST00000468244.1 chr9:128003942-128019297 3 547 14804 intergenic -2.97 0 0,0,0 0 0,0,0 0 0 184.782 0 3.65711969737909 287.509 0 3.98331532018373 279.012 0 0 cat,chimp,dog,guinea_pig,horse,human,macaque,marmoset,orangutan,panda, antisense antisense A549@1.01149,AG04450@0.500392,BJ@0.309343,GM12878@2.09884,H1HESC@0.733056,HELAS3@7.56161,HEPG2@5.44736,HMEC@0,HSMM@0.286131,HUVEC@2.17434,K562@0.861783,MCF7@1.55536,NHEK@0.138856,NHLF@1.27539,SKNSHRA@0.638896, 0 0 0 0 ENSG00000227452.1 ENST00000458261.1 chr9:128047877-128048998 2 602 517 intronic -2.97 0 0,0,1 0 0,0,0 0 0 0 0 0 2.629 0 0 18.648 0 0 chimp,human,macaque,marmoset,orangutan, sense_intronic sense_intronic A549@0.0053515,AG04450@0.0051995,BJ@0,GM12878@0.047389,H1HESC@0.0129975,HELAS3@0.0519585,HEPG2@0.028719,HMEC@0,HSMM@0,HUVEC@0.024895,K562@0.036009,MCF7@0.0473865,NHEK@0.0240467,NHLF@0,SKNSHRA@0.0137515, 0 0 0 0 ENSG00000227068.1 ENST00000437097.1 chr9:128329858-128335302 3 630 4810 intronic -0.32 0 0,1,0 0 0,0,0 0 0 0 0 0 0 412.203174603175 115.810810810811 229.284 0 0 chimp,human,macaque,marmoset,orangutan, antisense antisense A549@0,AG04450@0.0070815,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0.003248,NHEK@0,NHLF@0,SKNSHRA@0.166443, 0 0 0 0 ENSG00000232413.1 ENST00000441473.1 chr9:128819859-128921892 2 314 101717 intergenic -3.06 0 0,0,1 0 0,0,0 721.40127388535 34.1930749039 378.51 659.006369426752 42.1026377105105 361.272 578.713375796178 44.7895730310567 389.032 0 0 cat,chimp,cow,dog,elephant,guinea_pig,horse,human,macaque,marmoset,mouse,orangutan,panda,rabbit,rat, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000228392.1 ENST00000419853.1 chr9:129032400-129038197 3 2099 3694 intergenic 8.25 1 0,1,0 0 0,0,0 0 0 183.016 0 0 236.018 0 0 244.134 0 0 chimp,human,macaque,orangutan, lincRNA lincRNA A549@0,AG04450@0.0021325,BJ@0,GM12878@0,H1HESC@0.0023545,HELAS3@0,HEPG2@0.002027,HMEC@0.017725,HSMM@0.00178,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000233721.1 ENST00000454034.1 chr9:129278696-129281087 2 717 1672 intergenic 1.37 0 0,1,1 0 0,0,0 321.333333333333 315.464114832536 140.368 226.800557880056 327.716507177034 128 206.057182705718 338.136363636364 115.987 0 0 cat,chimp,cow,dog,elephant,guinea_pig,horse,human,macaque,marmoset,mouse,orangutan,panda, lincRNA lincRNA A549@0.023307,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0.0208685,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0.005719,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000226078.1 ENST00000425153.1 chr9:129289897-129292622 2 337 2386 intergenic -6.33 1 0,0,0 0 0,0,0 166.379821958457 162.99077954736 35.6 109.578635014837 123.398575020956 49.345 96.4124629080119 131.501676445935 45.029 0 0 chimp,cow,dog,elephant,horse,human,macaque,marmoset,orangutan,panda, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000224842.1 ENST00000451449.1 chr9:129351873-129375979 3 447 23655 intergenic 0 0 0,0,0 0 0,0,0 0 14.8525893045868 406 83.5659955257271 24.7795814838301 336.202 22.9261744966443 25.6969773832171 196.936 0 0 chimp,cow,guinea_pig,human,macaque,marmoset,mouse,orangutan,rat, antisense antisense A549@0.0051315,AG04450@0,BJ@0,GM12878@0,H1HESC@0.0070255,HELAS3@0,HEPG2@0,HMEC@0.083825,HSMM@0,HUVEC@0,K562@0,MCF7@0.0913095,NHEK@0.0714743,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000224842.1 ENST00000432418.1 chr9:129370392-129374798 2 421 3983 intergenic -4.21 1 0,1,1 0 0,0,0 62.5296912114014 3.79814210394175 50.625 258.890736342043 9.32563394426312 80.1 274.565320665083 10.5315089128797 82.192 0 0 cat,chimp,cow,dog,elephant,guinea_pig,horse,human,macaque,marmoset,opossum,orangutan,panda,pig,platypus,rabbit, antisense antisense A549@0.0051315,AG04450@0,BJ@0,GM12878@0,H1HESC@0.0070255,HELAS3@0,HEPG2@0,HMEC@0.083825,HSMM@0,HUVEC@0,K562@0,MCF7@0.0913095,NHEK@0.0714743,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000224842.1 ENST00000425370.1 chr9:129370557-129375978 3 503 4914 intergenic 0 0 0,0,0 0 0,0,0 0 18.8203093203093 406 136.037773359841 30.5962555962556 336.202 72.558648111332 33.7201872201872 196.936 0 0 chimp,cow,guinea_pig,human,macaque,orangutan, antisense antisense A549@0.0051315,AG04450@0,BJ@0,GM12878@0,H1HESC@0.0070255,HELAS3@0,HEPG2@0,HMEC@0.083825,HSMM@0,HUVEC@0,K562@0,MCF7@0.0913095,NHEK@0.0714743,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000238010.1 ENST00000457964.1 chr9:129403035-129403572 2 392 143 intronic -3.52 1 0,0,0 0 0,0,0 0 0 202.722 0 0 220.436 0 0 240.75 0 0 cat,chimp,dog,elephant,horse,human,marmoset,orangutan, sense_intronic sense_intronic A549@0.00632,AG04450@0,BJ@0.016427,GM12878@0,H1HESC@0.020998,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0.021298,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000228487.1 ENST00000453199.1 chr9:129976314-129984186 3 394 7474 exonic -1.86 0 0,0,0 0 0,0,0 2.42639593908629 53.1002140754616 162.241 0 61.4412630452234 94.514 0 53.7374899652127 93.426 0 0 chimp,horse,human,macaque,marmoset,orangutan, antisense antisense A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0.0104505,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0.0101285,NHEK@0,NHLF@0,SKNSHRA@0.01143, 0 0 0 0 ENSG00000225032.1 ENST00000439298.1 chr9:130578345-130584799 6 2049 4395 exonic 6.59 0 0,1,0 0 0,0,0 3.7179111761835 2.4 177.84 9.39921913128355 25.5997724687144 187.667 10.1200585651537 23.4468714448237 161.53 0 0 chimp,human,macaque,marmoset,orangutan, antisense antisense A549@0.235086,AG04450@0.126753,BJ@0.134826,GM12878@0.324421,H1HESC@0.456924,HELAS3@1.27009,HEPG2@0.775627,HMEC@0.070297,HSMM@0.163776,HUVEC@0.131062,K562@0.188667,MCF7@0.351536,NHEK@0.171455,NHLF@0.106938,SKNSHRA@0.448306, 0 0 0 0 ENSG00000225032.1 ENST00000425991.1 chr9:130580398-130583710 3 518 2790 exonic -4.09 0 0,1,1 0 0,0,0 35.6351351351351 0 0 95.2664092664093 25.2146953405018 7.326 82.7220077220077 24.1967741935484 9.212 0 0 cat,chimp,dog,guinea_pig,horse,human,macaque,marmoset,mouse,orangutan, antisense antisense A549@0.235086,AG04450@0.126753,BJ@0.134826,GM12878@0.324421,H1HESC@0.456924,HELAS3@1.27009,HEPG2@0.775627,HMEC@0.070297,HSMM@0.163776,HUVEC@0.131062,K562@0.188667,MCF7@0.351536,NHEK@0.171455,NHLF@0.106938,SKNSHRA@0.448306, 0 0 0 0 ENSG00000227218.1 ENST00000415141.1 chr9:130702574-130703231 2 544 111 exonic 6.59 1 0,0,0 0 0,0,0 75.2205882352941 287 0 103.974264705882 268.954954954955 0 103.167279411765 286.72972972973 0 0 0 chimp,elephant,human,macaque,marmoset,orangutan,panda, antisense antisense A549@0.023853,AG04450@0,BJ@0,GM12878@0.0144045,H1HESC@0.011398,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0.0485005,MCF7@0.029625,NHEK@0,NHLF@0,SKNSHRA@0.0166505, 0 0 0 0 ENSG00000230848.1 ENST00000414976.1 chr9:130801414-130819641 2 378 17847 intergenic -17.90 0 0,1,1 0 0,0,0 0 0 0 0 2.03227433182047 2.97 0 2.11161539754581 3.058 0 0 chimp,human,macaque,orangutan, antisense antisense A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0.0139685,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0.0140915,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000230536.1 ENST00000453870.1 chr9:130853248-130856736 2 763 2723 exonic -1.29 0 0,1,0 0 0,0,0 37.9816513761468 68.0675725302975 53.97 127.929226736566 60.5442526625046 38.27 150.549148099607 64.1887623944179 42.277 0 0 chimp,cow,dog,elephant,guinea_pig,horse,human,macaque,marmoset,mouse,orangutan,panda,pig,rat, antisense antisense A549@0,AG04450@0,BJ@0.0064365,GM12878@0,H1HESC@0,HELAS3@0.0069385,HEPG2@0,HMEC@0,HSMM@0.029876,HUVEC@0,K562@0.003563,MCF7@0.015888,NHEK@0,NHLF@0.0025225,SKNSHRA@0.0569035, 0 0 0 0 ENSG00000234771.2 ENST00000418747.1 chr9:130873450-130880972 5 3796 3718 intergenic 13.82 0 0,0,1 0 0,0,0 0 0 0 3.48972602739726 1.17025282409898 0 3.60142255005269 1.19876277568585 0 0 0 chimp,human,orangutan, antisense antisense A549@1.09975,AG04450@0.222111,BJ@0.308742,GM12878@1.78925,H1HESC@2.00711,HELAS3@3.21123,HEPG2@3.63002,HMEC@0.803912,HSMM@0.369945,HUVEC@1.04326,K562@1.57248,MCF7@3.12915,NHEK@1.02853,NHLF@0.188684,SKNSHRA@1.8352, 0 0 0 0 ENSG00000234771.2 ENST00000536815.1 chr9:130875641-130881013 4 2475 2891 intergenic 13.82 0 0,0,1 0 0,0,0 0 0 0 5.35232323232323 1.50501556554825 0 5.52363636363636 1.54168107921135 0 0 1 chimp,human,orangutan, antisense antisense A549@1.09975,AG04450@0.222111,BJ@0.308742,GM12878@1.78925,H1HESC@2.00711,HELAS3@3.21123,HEPG2@3.63002,HMEC@0.803912,HSMM@0.369945,HUVEC@1.04326,K562@1.57248,MCF7@3.12915,NHEK@1.02853,NHLF@0.188684,SKNSHRA@1.8352, 0 0 0 0 ENSG00000225951.1 ENST00000420801.1 chr9:131231236-131235291 2 405 3648 exonic 0.85 0 0,1,1 0 0,0,0 126.488888888889 15.2617872807018 97.993 228.701234567901 38.75 151.572 223.397530864198 38.7277960526316 116.578 0 0 cat,chimp,cow,dog,elephant,horse,human,macaque,marmoset,mouse,orangutan,panda,pig,rabbit,rat, antisense antisense A549@0.005333,AG04450@0,BJ@0.023783,GM12878@0.009906,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000228395.1 ENST00000434999.1 chr9:131291180-131314689 4 574 22929 intronic -4.78 0 1,1,1 0 0,0,0 0 23.1867940163112 11 16.7073170731707 21.6857255004579 64.394 13.1236933797909 22.479131231192 46.753 0 0 chimp,human,macaque,marmoset,orangutan, antisense antisense A549@0.243394,AG04450@0.101433,BJ@0.216997,GM12878@0.143455,H1HESC@0.052844,HELAS3@0.280655,HEPG2@0.144429,HMEC@0.067961,HSMM@0.278778,HUVEC@0.30689,K562@0.026309,MCF7@0.112984,NHEK@0.0671543,NHLF@0.147324,SKNSHRA@0.187075, 1 96 0 0 ENSG00000228395.1 ENST00000426704.1 chr9:131302817-131305965 2 968 2178 exonic -2.48 0 0,1,1 0 0,0,0 29.1456611570248 3.37924701561065 8.58 35.224173553719 3.97933884297521 0 32.702479338843 4.10468319559229 1.215 0 0 chimp,human,macaque,marmoset, antisense antisense A549@0.243394,AG04450@0.101433,BJ@0.216997,GM12878@0.143455,H1HESC@0.052844,HELAS3@0.280655,HEPG2@0.144429,HMEC@0.067961,HSMM@0.278778,HUVEC@0.30689,K562@0.026309,MCF7@0.112984,NHEK@0.0671543,NHLF@0.147324,SKNSHRA@0.187075, 0 0 0 0 ENSG00000234705.1 ENST00000428643.1 chr9:131425413-131425857 2 332 110 intergenic -19.68 0 0,1,1 0 0,0,0 0 0 0 32.421686746988 0 0 33.9487951807229 0 0 0 0 cat,chimp,dog,guinea_pig,horse,human,macaque,marmoset,mouse,orangutan,panda,pig,rabbit, antisense antisense A549@0.250971,AG04450@0.0896775,BJ@0.0144905,GM12878@0.934163,H1HESC@0.114933,HELAS3@0.381209,HEPG2@0.428309,HMEC@0.110334,HSMM@0,HUVEC@0.086254,K562@0,MCF7@0.44474,NHEK@0.277385,NHLF@0.023108,SKNSHRA@0, 0 0 0 0 ENSG00000226602.1 ENST00000427246.1 chr9:131448620-131449914 2 666 626 intronic -4.19 0 0,0,0 0 0,0,0 0 0 0 0 0 11.187 0 0 11.623 0 0 chimp,human,macaque,marmoset,orangutan, sense_intronic sense_intronic A549@0.008705,AG04450@0.027097,BJ@0,GM12878@0.166841,H1HESC@0.395865,HELAS3@0.136813,HEPG2@0.119055,HMEC@0.015342,HSMM@0,HUVEC@0,K562@0,MCF7@0.086127,NHEK@0.018361,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000223478.1 ENST00000443631.1 chr9:131486724-131495473 2 542 8205 intronic 6.41 0 1,1,1 1 0,0,0 0 22.497379646557 72.68 0 29.2107251675807 142.929 0 33.150761730652 119.254 0 0 human,macaque,orangutan, antisense antisense A549@9.2188,AG04450@2.32839,BJ@1.55072,GM12878@10.1525,H1HESC@4.20977,HELAS3@12.5233,HEPG2@3.00825,HMEC@2.81506,HSMM@1.17544,HUVEC@2.75481,K562@5.36277,MCF7@13.6391,NHEK@5.70482,NHLF@4.12912,SKNSHRA@5.33586, 0 0 0 0 ENSG00000234055.1 ENST00000434250.1 chr9:131860133-131862545 2 239 2171 exonic 0 0 0,1,0 0 0,0,0 0 44.7590971902349 12.906 44.3598326359833 76.666513127591 22.129 54.4937238493724 89.158452326117 28.851 0 0 cat,chimp,cow,dog,elephant,human,macaque,marmoset,orangutan,panda,pig, antisense antisense A549@0.086288,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0.0222185,MCF7@0.0382125,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000204055.4 ENST00000372490.3 chr9:131939050-131972827 2 2045 31730 exonic 11.29 0 0,1,0 0 0,0,0 104.899755501223 24.9330286794831 436.264 145.863080684597 40.7939174283013 538.13 123.590709046455 40.1916797982981 417.445 0 1 chimp,human,macaque,orangutan, antisense antisense A549@0.091953,AG04450@0.0365685,BJ@0.114401,GM12878@0.0227425,H1HESC@1.0728,HELAS3@0.0805655,HEPG2@0.0742195,HMEC@0.006001,HSMM@0.059632,HUVEC@0.0477315,K562@0.078474,MCF7@0.0637135,NHEK@0.00765267,NHLF@0.134777,SKNSHRA@0.175671, 0 0 0 0 ENSG00000204055.4 ENST00000451229.1 chr9:131963594-131971465 2 557 7312 intergenic 2.09 0 0,0,1 0 0,0,0 0 5.37253829321663 0 3.46858168761221 6.61187089715536 5.258 3.49371633752244 7.42710612691466 5.346 0 0 chimp,cow,elephant,horse,human,macaque,orangutan, antisense antisense A549@0.091953,AG04450@0.0365685,BJ@0.114401,GM12878@0.0227425,H1HESC@1.0728,HELAS3@0.0805655,HEPG2@0.0742195,HMEC@0.006001,HSMM@0.059632,HUVEC@0.0477315,K562@0.078474,MCF7@0.0637135,NHEK@0.00765267,NHLF@0.134777,SKNSHRA@0.175671, 0 0 0 0 ENSG00000235007.2 ENST00000427080.1 chr9:132020633-132022125 3 963 525 intergenic 3.71 0 0,0,0 0 0,0,0 148.372793354102 59.2380952380952 20.315 0 115.344761904762 13.861 0 113.07619047619 14.463 0 0 chimp,elephant,horse,human,macaque,marmoset,orangutan,panda,pig, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0.312543,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0.012585,K562@0.0025425,MCF7@0.0168565,NHEK@0,NHLF@0.0019975,SKNSHRA@0.0023485, 0 0 0 0 ENSG00000241084.1 ENST00000435157.1 chr9:132021341-132023860 2 393 2124 intergenic 2.41 0 0,0,0 0 0,0,0 0 67.2707156308851 31.1 0 0 60.556 0 0 59.365 0 0 chimp,human,macaque,marmoset,orangutan, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000224307.1 ENST00000455981.1 chr9:132044737-132048007 3 580 2686 intergenic -6.52 0 0,1,0 0 0,0,0 0 0 0 0 3.12025316455696 0 0 3.18503350707372 0 0 0 chimp,human,macaque,marmoset,orangutan, lincRNA lincRNA A549@0.0263975,AG04450@0,BJ@0,GM12878@0,H1HESC@0.360852,HELAS3@0.0071595,HEPG2@0.0546795,HMEC@0.02107,HSMM@0,HUVEC@0.030628,K562@0.0730065,MCF7@0.013794,NHEK@0.109929,NHLF@0,SKNSHRA@0.037204, 0 0 0 0 ENSG00000179082.3 ENST00000316786.1 chr9:132083295-132087184 2 3143 744 intergenic 3.00 0 0,1,0 0 0,0,1 9.49315940184537 70.5819892473118 122.292 9.7706013363029 114.860215053763 134.63 9.96977410117722 72.744623655914 122.171 0 0 chimp,human,marmoset,orangutan, lincRNA processed_transcript A549@0.0425495,AG04450@0.13031,BJ@0.406118,GM12878@0.0107405,H1HESC@0.127413,HELAS3@0.0276575,HEPG2@0.001355,HMEC@0.002604,HSMM@0.0124475,HUVEC@0.001698,K562@0.019106,MCF7@3.34689,NHEK@0.0281823,NHLF@0.386741,SKNSHRA@0.453963, 0 0 0 0 ENSG00000233901.1 ENST00000427109.1 chr9:132094579-132101180 3 505 6092 intergenic 0.32 0 0,1,0 1 0,0,0 0 44.4840774786605 0 13.980198019802 45.1785948785292 0 13.8217821782178 47.4425476034143 0 0 0 chimp,dog,human,macaque,orangutan,panda,pig, lincRNA lincRNA A549@1.2967,AG04450@0.72667,BJ@2.94712,GM12878@0,H1HESC@1.77964,HELAS3@3.26374,HEPG2@1.63996,HMEC@15.8207,HSMM@0.098355,HUVEC@0.0823565,K562@0.0134085,MCF7@3.3292,NHEK@9.85164,NHLF@0.971463,SKNSHRA@0.608639, 0 0 0 0 ENSG00000233901.1 ENST00000436710.1 chr9:132096185-132109678 4 897 12590 intergenic 4.73 1 1,1,1 1 0,0,0 0 21.5247815726767 0 7.87068004459309 20.3999205718825 14.253 7.78149386845039 21.4945194598888 14.234 0 0 cow,dog,horse,human,macaque,marmoset,orangutan,panda,pig, lincRNA lincRNA A549@1.2967,AG04450@0.72667,BJ@2.94712,GM12878@0,H1HESC@1.77964,HELAS3@3.26374,HEPG2@1.63996,HMEC@15.8207,HSMM@0.098355,HUVEC@0.0823565,K562@0.0134085,MCF7@3.3292,NHEK@9.85164,NHLF@0.971463,SKNSHRA@0.608639, 0 0 0 0 ENSG00000233901.1 ENST00000444125.1 chr9:132099158-132109743 4 779 9800 intergenic 4.73 1 1,1,1 0 0,0,0 64.6444159178434 12.5109183673469 85.008 91.5096277278562 1.81744897959184 118.663 95.2875481386393 3.33816326530612 111.084 0 0 chimp,cow,human,marmoset,orangutan,panda, lincRNA lincRNA A549@1.2967,AG04450@0.72667,BJ@2.94712,GM12878@0,H1HESC@1.77964,HELAS3@3.26374,HEPG2@1.63996,HMEC@15.8207,HSMM@0.098355,HUVEC@0.0823565,K562@0.0134085,MCF7@3.3292,NHEK@9.85164,NHLF@0.971463,SKNSHRA@0.608639, 0 0 0 0 ENSG00000233901.1 ENST00000423122.1 chr9:132104122-132121817 3 542 17149 intergenic 2.73 1 0,1,1 0 0,0,0 0 0 0 0 5.45600326549653 0 0 7.56038252959356 0 0 0 chimp,cow,dog,horse,human,macaque,marmoset,orangutan,panda, lincRNA lincRNA A549@1.2967,AG04450@0.72667,BJ@2.94712,GM12878@0,H1HESC@1.77964,HELAS3@3.26374,HEPG2@1.63996,HMEC@15.8207,HSMM@0.098355,HUVEC@0.0823565,K562@0.0134085,MCF7@3.3292,NHEK@9.85164,NHLF@0.971463,SKNSHRA@0.608639, 0 0 0 0 ENSG00000230676.1 ENST00000436510.1 chr9:132192931-132209569 2 1844 14792 intergenic 5.32 0 0,0,0 0 0,0,0 37.2245119305857 15.5081124932396 0 21.0065075921909 12.7028799351001 5.66 24.4219088937093 14.7750135208221 5.68 0 0 chimp,cow,human,macaque,marmoset,orangutan,pig, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0.002261,HEPG2@0.021058,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0.055576,NHEK@0,NHLF@0,SKNSHRA@0.0159345, 0 0 0 0 ENSG00000226355.1 ENST00000439014.1 chr9:132200495-132201397 2 798 102 intergenic -2.49 0 0,0,0 0 0,0,0 0 0 125.549 0 0 118.281 0 0 126.033 0 0 chimp,horse,human,macaque,marmoset, lincRNA lincRNA A549@0.025359,AG04450@0.0330155,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0.014649,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0.0125655,NHEK@0,NHLF@0,SKNSHRA@0.005677, 0 0 0 0 ENSG00000230676.1 ENST00000454408.1 chr9:132208911-132213701 2 457 4331 intergenic -6.29 0 0,0,0 0 0,0,0 57.8774617067834 0 44.536 0 1.30685753867467 60.132 0 1.31147540983607 54.719 0 0 chimp,human,orangutan, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0.002261,HEPG2@0.021058,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0.055576,NHEK@0,NHLF@0,SKNSHRA@0.0159345, 0 0 0 0 ENSG00000204054.5 ENST00000454968.1 chr9:132245730-132266553 4 1399 19418 intergenic 6.31 1 0,0,0 0 0,0,0 0 22.6742197960655 45.5 0 26.8733134205376 83.945 0 40.1143784117829 106.647 0 0 chimp,human,macaque,marmoset,orangutan, lincRNA processed_transcript A549@12.8628,AG04450@6.18626,BJ@11.4827,GM12878@0.402249,H1HESC@0.730946,HELAS3@49.3652,HEPG2@30.0012,HMEC@2.5872,HSMM@7.4862,HUVEC@13.266,K562@11.8173,MCF7@20.5186,NHEK@2.33927,NHLF@7.78102,SKNSHRA@18.0892, 0 0 0 0 ENSG00000204054.5 ENST00000444184.1 chr9:132250824-132266553 3 1884 13841 intergenic 9.43 1 0,1,0 0 0,0,0 37.5636942675159 17.5279242829275 48.944 41.3917197452229 21.3452785203381 112.028 41.4814225053079 36.8622209377935 159.629 0 0 chimp,human,macaque,orangutan,pig, lincRNA processed_transcript A549@12.8628,AG04450@6.18626,BJ@11.4827,GM12878@0.402249,H1HESC@0.730946,HELAS3@49.3652,HEPG2@30.0012,HMEC@2.5872,HSMM@7.4862,HUVEC@13.266,K562@11.8173,MCF7@20.5186,NHEK@2.33927,NHLF@7.78102,SKNSHRA@18.0892, 0 0 0 0 ENSG00000204054.5 ENST00000419300.1 chr9:132251379-132267360 2 1957 14022 intergenic 6.31 0 1,1,1 1 0,0,0 0 17.3016688061617 119.714 0 21.0697475395807 187.282 0 36.3863928112965 234.931 0 0 chimp,human,macaque,marmoset,orangutan, lincRNA processed_transcript A549@12.8628,AG04450@6.18626,BJ@11.4827,GM12878@0.402249,H1HESC@0.730946,HELAS3@49.3652,HEPG2@30.0012,HMEC@2.5872,HSMM@7.4862,HUVEC@13.266,K562@11.8173,MCF7@20.5186,NHEK@2.33927,NHLF@7.78102,SKNSHRA@18.0892, 0 0 0 0 ENSG00000204054.5 ENST00000423918.1 chr9:132251386-132275947 5 1649 22904 intergenic 6.31 0 1,1,1 1 0,0,0 0 11.7804750261963 119.714 0 15.9072214460356 187.282 0 25.6553003842124 234.931 0 0 chimp,human,macaque,marmoset,orangutan, lincRNA processed_transcript A549@12.8628,AG04450@6.18626,BJ@11.4827,GM12878@0.402249,H1HESC@0.730946,HELAS3@49.3652,HEPG2@30.0012,HMEC@2.5872,HSMM@7.4862,HUVEC@13.266,K562@11.8173,MCF7@20.5186,NHEK@2.33927,NHLF@7.78102,SKNSHRA@18.0892, 0 0 0 0 ENSG00000204054.5 ENST00000542697.1 chr9:132251920-132271083 2 2371 16790 intergenic -2.40 0 0,0,0 0 0,0,0 0 16.0702799285289 46.506 5.3509067903838 20.4742703990471 39.246 7.35428089413749 33.203454437165 38.701 0 0 chimp,cow,human,macaque,marmoset,orangutan,panda, lincRNA processed_transcript A549@12.8628,AG04450@6.18626,BJ@11.4827,GM12878@0.402249,H1HESC@0.730946,HELAS3@49.3652,HEPG2@30.0012,HMEC@2.5872,HSMM@7.4862,HUVEC@13.266,K562@11.8173,MCF7@20.5186,NHEK@2.33927,NHLF@7.78102,SKNSHRA@18.0892, 0 0 0 0 ENSG00000204054.5 ENST00000454635.1 chr9:132253098-132264793 3 602 11089 intergenic 3.08 0 0,1,1 0 0,0,0 0 21.87789701506 0 0 25.4985120389575 12.687 5.16279069767442 44.4380016232302 14.329 0 0 chimp,human,macaque,marmoset,orangutan, lincRNA processed_transcript A549@12.8628,AG04450@6.18626,BJ@11.4827,GM12878@0.402249,H1HESC@0.730946,HELAS3@49.3652,HEPG2@30.0012,HMEC@2.5872,HSMM@7.4862,HUVEC@13.266,K562@11.8173,MCF7@20.5186,NHEK@2.33927,NHLF@7.78102,SKNSHRA@18.0892, 0 0 0 0 ENSG00000204054.5 ENST00000458346.1 chr9:132253271-132265853 3 563 12015 intergenic 3.08 0 0,0,0 0 0,0,0 0 20.1917602996255 0 0 23.5333333333333 12.687 3.2202486678508 41.0131502288806 15.365 0 0 chimp,human,macaque,marmoset,orangutan, lincRNA processed_transcript A549@12.8628,AG04450@6.18626,BJ@11.4827,GM12878@0.402249,H1HESC@0.730946,HELAS3@49.3652,HEPG2@30.0012,HMEC@2.5872,HSMM@7.4862,HUVEC@13.266,K562@11.8173,MCF7@20.5186,NHEK@2.33927,NHLF@7.78102,SKNSHRA@18.0892, 0 0 0 0 ENSG00000204054.5 ENST00000453213.1 chr9:132260618-132265944 2 467 4857 intergenic 6.31 0 0,0,1 0 0,0,0 0 18.544780728845 0 0 17.3753345686638 0 0 57.118591723286 3.741 0 0 chimp,cow,elephant,horse,human,macaque,marmoset,orangutan, lincRNA processed_transcript A549@12.8628,AG04450@6.18626,BJ@11.4827,GM12878@0.402249,H1HESC@0.730946,HELAS3@49.3652,HEPG2@30.0012,HMEC@2.5872,HSMM@7.4862,HUVEC@13.266,K562@11.8173,MCF7@20.5186,NHEK@2.33927,NHLF@7.78102,SKNSHRA@18.0892, 0 0 0 0 ENSG00000239353.1 ENST00000427778.1 chr9:132264269-132275965 2 380 11314 intergenic 0 0 0,1,1 0 0,0,0 0 2.40551529079017 0 0 6.08971186141064 0 0 6.8409934594308 8.147 0 0 chimp,human,macaque, lincRNA processed_transcript A549@0.009062,AG04450@0.146957,BJ@0,GM12878@0.004781,H1HESC@0,HELAS3@0.213999,HEPG2@0.121024,HMEC@0,HSMM@0,HUVEC@0,K562@0.013522,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0.020687, 0 0 0 0 ENSG00000204054.5 ENST00000412141.1 chr9:132265281-132275796 4 735 9774 intergenic 6.31 0 0,1,0 0 0,0,0 0 2.78453038674033 0 0 7.04921219562104 0 0 7.91886638019235 0 0 0 chimp,human,macaque,marmoset,orangutan, lincRNA processed_transcript A549@12.8628,AG04450@6.18626,BJ@11.4827,GM12878@0.402249,H1HESC@0.730946,HELAS3@49.3652,HEPG2@30.0012,HMEC@2.5872,HSMM@7.4862,HUVEC@13.266,K562@11.8173,MCF7@20.5186,NHEK@2.33927,NHLF@7.78102,SKNSHRA@18.0892, 0 0 0 0 ENSG00000227619.1 ENST00000443993.1 chr9:132337688-132346835 4 2445 6696 intergenic 1.13 1 0,0,1 0 0,0,0 0 0 0 1.21717791411043 1.93070489844683 0 1.2319018404908 8.09886499402628 0 0 0 chimp,human,macaque,marmoset,orangutan, antisense antisense A549@0.365175,AG04450@0.214686,BJ@0.483054,GM12878@2.11688,H1HESC@0.0023765,HELAS3@0.403746,HEPG2@0.876615,HMEC@0,HSMM@0.023827,HUVEC@0.0024305,K562@0.021988,MCF7@0.136104,NHEK@0.00427733,NHLF@0.0992165,SKNSHRA@0.0224535, 0 0 0 0 ENSG00000234789.1 ENST00000455074.1 chr9:132402755-132403561 2 468 336 exonic 3.38 0 1,1,1 1 0,0,0 74.8418803418803 0 18.34 124.508547008547 0 15.562 129.549145299145 0 17.648 0 0 chimp,cow,human,macaque,marmoset,orangutan, antisense antisense A549@0,AG04450@0.0137215,BJ@0,GM12878@0.00565,H1HESC@0,HELAS3@0.070227,HEPG2@0.0311685,HMEC@0,HSMM@0,HUVEC@0,K562@0.00494,MCF7@0,NHEK@0,NHLF@0.0082105,SKNSHRA@0.251267, 0 0 0 0 ENSG00000236024.1 ENST00000440413.1 chr9:132475175-132480914 2 427 5310 intronic -0.70 0 0,1,1 0 0,0,0 0 2.75555555555556 76.032 14.6838407494145 8.36572504708098 125.385 14.519906323185 14.595856873823 122.056 0 0 cat,chimp,cow,elephant,horse,human,macaque,marmoset,orangutan,pig, antisense antisense A549@0.012877,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000225425.1 ENST00000447586.1 chr9:132677198-132677715 2 473 42 exonic -1.95 0 0,0,0 0 0,0,0 0 0 0 18.338266384778 0 0 20.9154334038055 0 3.975 0 0 chimp,dog,elephant,horse,human,macaque,marmoset,orangutan,panda,pig,rabbit, antisense antisense A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0.009553, 0 0 0 0 ENSG00000230684.1 ENST00000414926.1 chr9:132695815-132698820 2 264 2739 intronic -2.44 0 0,0,1 0 0,0,0 0 14.8156261409273 11.472 0 6.32092004381161 7.103 0 10.6093464768164 12.91 0 0 chimp,cow,elephant,human,macaque,marmoset,orangutan, antisense antisense A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000228932.1 ENST00000415344.1 chr9:132891870-132895515 2 646 2997 intronic 0.94 0 0,0,1 0 0,0,0 0 0 64.125 0 0 60.768 0 0 69.744 0 0 chimp,horse,human,macaque,marmoset,orangutan,pig, processed_transcript processed_transcript A549@0.109137,AG04450@0.010529,BJ@0.016039,GM12878@0.0820445,H1HESC@0.010936,HELAS3@1.43618,HEPG2@1.0116,HMEC@0,HSMM@0.127701,HUVEC@0.333296,K562@0.036109,MCF7@1.02403,NHEK@0.008375,NHLF@0,SKNSHRA@0.302273, 0 0 0 0 ENSG00000236658.1 ENST00000421067.1 chr9:133809238-133820907 3 459 11206 intronic -2.66 0 0,0,1 0 0,0,0 0 26.2777976084241 0 0 41.7041763341067 22.57 0 39.0734427985008 35.77 0 0 human, antisense antisense A549@0.16315,AG04450@0,BJ@0,GM12878@0.0050735,H1HESC@0.016068,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0.070219,NHEK@0.00552633,NHLF@0.0168465,SKNSHRA@0, 0 0 0 0 ENSG00000236986.1 ENST00000415391.1 chr9:134012047-134042622 3 420 30151 exonic 0.81 1 0,0,0 0 0,0,0 99.5571428571429 15.153726244569 0 99.5095238095238 19.4406155683062 0 113.266666666667 21.8971510066001 0 0 0 cat,chimp,cow,elephant,guinea_pig,horse,human,macaque,marmoset,mouse,opossum,orangutan,panda,pig,platypus, antisense antisense A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000236986.1 ENST00000417798.1 chr9:134034726-134042795 2 454 7613 exonic 0.81 1 0,0,0 0 0,0,0 97.5726872246696 13.0496519112045 0 92.057268722467 24.9586234073296 0 104.784140969163 28.1546039668987 0 0 0 cat,chimp,dog,elephant,horse,human,marmoset,pig,rabbit, antisense antisense A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000246851.1 ENST00000502188.1 chr9:134065297-134069592 2 3082 1211 exonic -1.03 0 0,0,1 0 0,0,0 10.8676184295912 0 5.952 7.11907852044127 0 0 8.24724205061648 0 0 1 1 chimp,human,macaque,marmoset,orangutan, antisense antisense A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0.0008605,HEPG2@0.007076,HMEC@0,HSMM@0,HUVEC@0,K562@0.0030115,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000230289.1 ENST00000415423.1 chr9:134391945-134397616 2 471 5198 exonic 5.60 1 0,1,1 0 0,0,0 13.2059447983015 12.5771450557907 16.24 33.9851380042463 38.7633705271258 39.022 42.3630573248408 49.9193920738746 51.19 0 0 chimp,dog,horse,human,marmoset,orangutan,panda, antisense antisense A549@0.093789,AG04450@0.0125175,BJ@0.0102325,GM12878@0.011228,H1HESC@0.176453,HELAS3@0.224292,HEPG2@0.32044,HMEC@2.26227,HSMM@0,HUVEC@0,K562@0,MCF7@0.132921,NHEK@0.0107953,NHLF@0,SKNSHRA@0.051828, 0 0 0 0 ENSG00000236687.1 ENST00000444708.1 chr9:134691579-134696375 3 826 3966 intergenic 0.60 0 0,0,0 0 0,0,0 0 0 0 0 0 0 0 1.53681290973273 0 0 0 chimp,human,macaque,marmoset,orangutan, lincRNA lincRNA A549@0.052584,AG04450@0,BJ@0,GM12878@0,H1HESC@0.0218465,HELAS3@0.088281,HEPG2@0.0032905,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0.047988,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000230940.1 ENST00000444872.1 chr9:134907273-134952977 2 431 45271 exonic 0.36 0 0,0,0 0 0,0,0 288 35.0624903359767 28.796 327.777262180975 32.2924830465419 6.462 385.872389791183 37.8013076804135 6.545 0 0 cat,dog,elephant,guinea_pig,horse,human,marmoset,mouse,orangutan,panda,pig,rabbit,rat, antisense antisense A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0.005249, 0 0 0 0 ENSG00000227771.1 ENST00000448486.1 chr9:135321285-135336859 2 622 14950 intronic -2.76 0 0,1,1 0 0,0,0 0 35.6424080267559 0 0 34.318127090301 0 0 37.6466220735786 0 0 0 chimp,cow,elephant,horse,human,macaque,marmoset,orangutan, sense_intronic sense_intronic A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0.004532, 0 0 0 0 ENSG00000224992.1 ENST00000451318.1 chr9:135644840-135645599 2 529 228 intronic 5.26 0 0,1,1 0 0,0,0 24.758034026465 193.311403508772 0 15.406427221172 344.69298245614 0 76.5085066162571 530.447368421053 0 0 0 cat,chimp,cow,dog,elephant,horse,human,marmoset,orangutan,panda, sense_intronic sense_intronic A549@0.0207145,AG04450@0.0072005,BJ@0.0156195,GM12878@0.075568,H1HESC@0.0133825,HELAS3@0.043748,HEPG2@0.0190565,HMEC@0.009158,HSMM@0,HUVEC@0.028251,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0.011523, 0 0 0 0 ENSG00000233800.2 ENST00000443690.1 chr9:135822456-135826943 2 524 3961 intronic 3.34 1 0,0,0 0 0,0,0 0 0 0 0 0 20.022 0 1.90179247664731 24.644 0 0 human, sense_intronic sense_intronic A549@0.0099315,AG04450@0.0148645,BJ@0.0105215,GM12878@0.0141745,H1HESC@0.0169805,HELAS3@0.027659,HEPG2@0.0076565,HMEC@0,HSMM@0.094144,HUVEC@0.000625,K562@0.0249995,MCF7@0,NHEK@0,NHLF@0.0014555,SKNSHRA@0.0049325, 0 0 0 0 ENSG00000233800.2 ENST00000524638.1 chr9:135825077-135826940 2 458 1403 intronic 1.81 1 0,0,0 0 0,0,0 0 0 0 0 0 0 0 5.36920883820385 0 0 1 chimp,human,macaque,orangutan, sense_intronic sense_intronic A549@0.0099315,AG04450@0.0148645,BJ@0.0105215,GM12878@0.0141745,H1HESC@0.0169805,HELAS3@0.027659,HEPG2@0.0076565,HMEC@0,HSMM@0.094144,HUVEC@0.000625,K562@0.0249995,MCF7@0,NHEK@0,NHLF@0.0014555,SKNSHRA@0.0049325, 0 0 0 0 ENSG00000248272.1 ENST00000506798.1 chr9:135894816-135896553 2 1674 61 intergenic 12.91 0 1,1,1 0 0,0,0 580.189366786141 656 4.248 731.778972520908 799 3.836 782.969534050179 853 4.046 0 0 cat,chimp,cow,dog,elephant,guinea_pig,horse,human,macaque,marmoset,mouse,opossum,orangutan,panda,pig,platypus,rabbit,rat, lincRNA lincRNA A549@3.45097,AG04450@9.21429,BJ@7.05082,GM12878@3.17569,H1HESC@0.998569,HELAS3@1.24855,HEPG2@1.29743,HMEC@0.237223,HSMM@0.203951,HUVEC@0.733758,K562@3.6213,MCF7@0.402442,NHEK@1.56612,NHLF@0.289399,SKNSHRA@4.00747, 0 0 0 0 ENSG00000228947.1 ENST00000423824.1 chr9:135946515-135947247 2 598 132 exonic 13.00 0 0,1,0 0 0,0,0 0 0 0 122.138795986622 0 0 189.729096989967 0 6.318 0 0 cat,chimp,dog,elephant,horse,human,macaque,marmoset,orangutan, antisense antisense A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000227677.1 ENST00000447308.1 chr9:136028340-136029645 2 641 662 exonic -1.53 0 0,1,0 0 0,0,0 0 171.027190332326 0 30.0374414976599 256.521148036254 0 23.0904836193448 225.057401812689 0 0 0 chimp,dog,elephant,horse,human,macaque,marmoset,orangutan,panda, antisense antisense A549@0,AG04450@0,BJ@0,GM12878@0.016519,H1HESC@0.004526,HELAS3@0.0041275,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0.009548,NHEK@0,NHLF@0,SKNSHRA@0.016732, 0 0 0 0 ENSG00000175164.7 ENST00000540023.1 chr9:136130107-136131271 2 220 942 intergenic 0 0 0,1,0 0 0,1,1 0 0 0 172.072727272727 0 52.89 231.8 0 88.961 0 0 cat,chimp,cow,dog,elephant,guinea_pig,horse,human,macaque,marmoset,mouse,opossum,orangutan,panda,platypus,rabbit,rat, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0.0132045,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0.00855,K562@0.471405,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000175164.7 ENST00000538324.1 chr9:136131053-136150605 5 932 18612 intergenic 0.89 0 0,1,1 1 0,1,1 0 0 0 111.349785407725 0.192617666021921 0 177.495708154507 0.699924779712014 0 0 0 cat,chimp,cow,dog,elephant,guinea_pig,horse,human,macaque,marmoset,mouse,opossum,orangutan,panda,pig,platypus,rabbit,rat, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0.0132045,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0.00855,K562@0.471405,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000175164.7 ENST00000453660.1 chr9:136131053-136150617 7 1069 18483 intergenic -3.33 0 0,1,1 1 0,1,1 0 0 0 97.3030869971936 0.168100416599037 0 170.151543498597 0.664935345993616 0 0 0 cat,chimp,cow,dog,elephant,guinea_pig,horse,human,macaque,marmoset,mouse,orangutan,panda,pig,platypus,rabbit,rat, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0.0132045,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0.00855,K562@0.471405,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000227898.1 ENST00000420546.1 chr9:136333982-136335880 3 426 1468 exonic 0 0 0,1,1 0 0,0,0 0 5.01362397820164 0 0 4.34400544959128 1.578 0 4.32425068119891 1.59 0 0 chimp,human,macaque,marmoset,orangutan, antisense antisense A549@0.0064385,AG04450@0.010714,BJ@0.0290675,GM12878@0.07725,H1HESC@0.0699255,HELAS3@0.0638155,HEPG2@0.120784,HMEC@0,HSMM@0.0174425,HUVEC@0.136553,K562@0,MCF7@0.056506,NHEK@0.0708637,NHLF@0.0090965,SKNSHRA@0.143158, 0 0 0 0 ENSG00000225756.1 ENST00000425189.1 chr9:136519708-136522435 2 2137 588 exonic 17.13 0 0,0,1 0 0,0,0 0 34.030612244898 0 43.9934487599438 88.9795918367347 2.494 20.9840898455779 108.08843537415 0.692 0 0 chimp,human,macaque,marmoset,orangutan, antisense non_coding A549@0.004612,AG04450@0.0615165,BJ@0.006906,GM12878@0.0074485,H1HESC@0.219061,HELAS3@0.124891,HEPG2@1.49112,HMEC@0,HSMM@0.898415,HUVEC@0.005565,K562@0.005741,MCF7@0.019182,NHEK@0,NHLF@0.0988405,SKNSHRA@0.665946, 0 0 0 0 ENSG00000235106.1 ENST00000430633.1 chr9:136890561-136893224 3 2236 423 intergenic 18.76 1 1,1,1 1 0,0,0 40.2093023255814 0 9.9 31.4561717352415 0 19.417 54.5433810375671 0 20.872 0 0 chimp,human,macaque,marmoset,orangutan, lincRNA non_coding A549@3.1379,AG04450@5.18668,BJ@6.23419,GM12878@1.38474,H1HESC@4.15523,HELAS3@3.25739,HEPG2@1.81595,HMEC@5.36401,HSMM@6.51816,HUVEC@3.50667,K562@1.27016,MCF7@6.96249,NHEK@3.72936,NHLF@7.69926,SKNSHRA@10.3489, 0 0 0 0 ENSG00000235106.1 ENST00000432807.1 chr9:136890617-136893224 2 2298 307 intergenic 18.76 1 1,1,1 1 0,0,0 39.124456048738 0 0 28.420365535248 0 13.642 48.6705831157528 0 19.45 0 0 chimp,human,macaque,marmoset,orangutan, lincRNA processed_transcript A549@3.1379,AG04450@5.18668,BJ@6.23419,GM12878@1.38474,H1HESC@4.15523,HELAS3@3.25739,HEPG2@1.81595,HMEC@5.36401,HSMM@6.51816,HUVEC@3.50667,K562@1.27016,MCF7@6.96249,NHEK@3.72936,NHLF@7.69926,SKNSHRA@10.3489, 0 0 0 0 ENSG00000235138.1 ENST00000412181.1 chr9:136919412-136923927 3 2109 2402 intronic 11.98 0 0,0,0 0 0,0,0 0 0 0 0 0 111.586 0 0 123.365 0 0 chimp,human,macaque,orangutan, antisense antisense A549@0,AG04450@0,BJ@0.0011655,GM12878@0.005727,H1HESC@0,HELAS3@0.026672,HEPG2@0.036163,HMEC@0,HSMM@0.0058455,HUVEC@0,K562@0,MCF7@0.0404055,NHEK@0.00616267,NHLF@0,SKNSHRA@0.0046995, 0 0 0 0 ENSG00000223729.1 ENST00000417135.1 chr9:137185777-137187243 2 741 723 intergenic 8.50 0 0,0,0 0 0,0,0 0 0 0 0 15.6196403872752 0 0 16.1161825726141 23.175 0 0 chimp,human,macaque,marmoset,orangutan, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0.005584,HELAS3@0.007144,HEPG2@0.005735,HMEC@0,HSMM@0,HUVEC@0.01309,K562@0,MCF7@0.0709055,NHEK@0,NHLF@0.005194,SKNSHRA@0.013603, 0 0 0 0 ENSG00000223795.1 ENST00000444936.1 chr9:137397318-137413288 3 447 15519 intergenic 2.68 0 0,0,0 0 0,0,0 0 0 0 0 0.648495392744378 0 0 0.673174817965075 0 0 0 chimp,human,macaque,orangutan, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000228877.1 ENST00000435284.1 chr9:137419028-137437090 2 426 17634 intergenic 2.66 0 0,0,0 0 0,0,0 0 3.23080412838834 37.03 0 1.28138822728819 67.858 0 2.23233526142679 76.079 0 0 chimp,human,macaque,marmoset,orangutan, lincRNA lincRNA A549@0,AG04450@0.0138335,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000227150.1 ENST00000446184.1 chr9:137444584-137445743 2 278 879 intergenic 0 0 0,0,1 0 0,0,0 0 0 20.336 0 0 19.088 0 0 23.868 0 0 human,macaque,marmoset,orangutan, lincRNA lincRNA A549@0,AG04450@0.0230325,BJ@0,GM12878@0,H1HESC@0,HELAS3@0.0473925,HEPG2@0.019484,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000234960.1 ENST00000423455.1 chr9:137474325-137477036 2 2396 313 intergenic 3.23 0 0,0,0 0 0,0,0 0 0 0 21.3030050083472 0 0 22.2445742904841 0 0 0 0 chimp,human,macaque,marmoset,orangutan, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0.0093615,HUVEC@0,K562@0,MCF7@0.001715,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000225565.1 ENST00000454160.1 chr9:137519676-137521252 2 597 977 intergenic 4.32 0 0,0,0 0 0,0,0 22.8157453936348 0 20.046 22.5175879396985 0 25.346 17.2948073701843 0 20.917 0 0 cat,chimp,dog,elephant,human,macaque,marmoset,orangutan, antisense antisense A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000236403.1 ENST00000417054.1 chr9:137828997-137835041 3 459 5581 intergenic -7.68 1 0,0,0 0 0,0,0 0 0.748969718688407 0 0 3.77226303529833 6.647 31.5490196078431 6.08260168428597 6.647 0 0 chimp,human,macaque,marmoset,orangutan, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000227958.1 ENST00000452377.1 chr9:138096568-138129443 2 525 32348 intergenic 2.93 0 0,0,0 0 0,0,0 0 0.66736737974527 0 0 1.16795474217881 0 0 2.30694324224063 0 0 0 chimp,human,macaque,marmoset, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0.007873,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000233936.1 ENST00000420883.1 chr9:138137542-138144554 2 884 6126 intergenic -1.40 0 0,0,0 0 0,0,0 8.03846153846154 0 0 2.30769230769231 0.720861900097943 0 2.34389140271493 1.77228207639569 15.799 0 0 chimp,guinea_pig,horse,human,macaque,marmoset,orangutan,panda, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0.102448,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0.002269,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000235572.1 ENST00000450850.1 chr9:138244530-138246066 3 387 1145 intergenic 9.22 0 0,0,1 0 0,0,0 0 0 12.42 19.8062015503876 2.66375545851528 24.816 23.1524547803618 4.29170305676856 40.428 0 0 chimp,horse,human,macaque,marmoset,orangutan,panda, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000230200.1 ENST00000412464.1 chr9:138356344-138356726 2 246 134 intergenic 0 0 0,0,0 0 0,0,0 0 0 0 0 0 0 0 0 0 0 0 NA lincRNA processed_transcript A549@0.057285,AG04450@0.0366095,BJ@0.0292735,GM12878@0,H1HESC@0.195161,HELAS3@0.981847,HEPG2@0.197938,HMEC@0,HSMM@0.0183835,HUVEC@0.065144,K562@0.364972,MCF7@1.20798,NHEK@0.0942377,NHLF@0.0155605,SKNSHRA@0.086177, 0 0 0 0 ENSG00000225361.1 ENST00000455039.1 chr9:138359934-138364095 2 793 3366 intergenic -3.45 0 0,0,1 0 0,0,0 0 0 0 0 0 0 0 0 0 0 0 chimp,human,macaque,orangutan, antisense antisense A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0.021579,HEPG2@0.027449,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000226706.1 ENST00000415062.1 chr9:138395119-138398293 3 1114 2056 exonic 12.19 1 0,0,1 0 0,0,0 23.1867145421903 14.09046692607 0 50.7710951526032 40.102626459144 0 75.1606822262118 65.0082684824903 13.826 0 0 chimp,cow,horse,human,macaque,marmoset, antisense antisense A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0.0078165,HELAS3@0,HEPG2@0.007326,HMEC@0,HSMM@0,HUVEC@0,K562@0.0044755,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0.0020345, 0 0 0 0 ENSG00000237339.1 ENST00000447907.1 chr9:138466781-138477210 6 874 9545 intergenic 0.85 0 0,1,0 0 0,0,0 0 0 0 0 0 0 33.4931350114416 21.572760607648 0 0 0 human, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0.0011835,H1HESC@0,HELAS3@0,HEPG2@0.001104,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000237339.1 ENST00000445997.1 chr9:138466797-138478958 5 2466 9687 intergenic 5.27 0 0,1,0 0 0,0,0 0 0 0 0 0 0 35.8892944038929 21.2565293692578 0 0 0 human,orangutan, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0.0011835,H1HESC@0,HELAS3@0,HEPG2@0.001104,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000237339.1 ENST00000447497.1 chr9:138475589-138477118 2 340 1187 intergenic 0.44 0 0,0,0 0 0,0,0 0 0 0 0 0 0 0 0 99.448 0 0 human,orangutan, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0.0011835,H1HESC@0,HELAS3@0,HEPG2@0.001104,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000236543.1 ENST00000430816.1 chr9:138506142-138507354 2 200 1010 intergenic -2.60 0 0,1,1 0 0,0,0 0 0 0 56.48 2.17623762376238 0 71.09 2.1970297029703 0 0 0 cat,chimp,cow,dog,elephant,guinea_pig,horse,human,macaque,marmoset,mouse,orangutan,panda,pig,rat, antisense antisense A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000238058.1 ENST00000423793.1 chr9:138799658-138805359 3 308 5389 intergenic 0 0 1,1,1 1 0,0,0 0 0 10.032 0 0 93.693 0 0 164.33 0 0 chimp,human,macaque,orangutan, antisense antisense A549@1.0547,AG04450@1.00767,BJ@0.538342,GM12878@0.596023,H1HESC@0.494502,HELAS3@3.29725,HEPG2@1.36557,HMEC@0.381814,HSMM@0.563484,HUVEC@0.340529,K562@1.89302,MCF7@2.57623,NHEK@0.823662,NHLF@0.618361,SKNSHRA@1.18708, 0 0 0 0 ENSG00000251337.1 ENST00000509235.1 chr9:138900082-138901544 2 1033 427 exonic -4.20 0 0,1,1 0 0,0,0 63.7173281703775 0 0 114.557599225557 22.2084309133489 24.365 138.666021297193 22.615925058548 35.78 0 0 chimp,cow,dog,elephant,guinea_pig,human,macaque,marmoset,mouse,orangutan,panda,pig,rat, lincRNA lincRNA A549@0.008389,AG04450@0,BJ@0.0062535,GM12878@0,H1HESC@0,HELAS3@0.0172275,HEPG2@0.03418,HMEC@0,HSMM@0.003976,HUVEC@0,K562@0.009492,MCF7@0.003885,NHEK@0.00469433,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000238227.1 ENST00000418388.1 chr9:139006427-139010709 2 2821 1459 intergenic 76.82 1 1,1,1 1 0,0,1 51.2314781992201 0 0 84.7912087912088 3.64633310486635 0 107.303438496987 2.83481836874572 0 0 0 cat,human,macaque,orangutan, lincRNA processed_transcript A549@6.50706,AG04450@4.67307,BJ@6.89398,GM12878@2.63132,H1HESC@9.97785,HELAS3@12.7276,HEPG2@6.74301,HMEC@11.822,HSMM@8.40118,HUVEC@8.95109,K562@4.77885,MCF7@11.0505,NHEK@6.50522,NHLF@7.23552,SKNSHRA@7.49453, 0 0 0 0 ENSG00000246044.1 ENST00000501184.1 chr9:139006434-139010514 2 2512 1566 intergenic 29.64 0 1,1,1 0 0,0,0 56.8674363057325 0 5.019 89.359872611465 4.08684546615581 0 119.877786624204 3.92464878671775 2.43 0 0 cat,human,macaque,orangutan,rabbit, lincRNA lincRNA A549@0.009999,AG04450@0.0112035,BJ@0.0056925,GM12878@0.022105,H1HESC@0.0179555,HELAS3@0.0042225,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0.0040155,MCF7@0.0040775,NHEK@0.00209833,NHLF@0.0015525,SKNSHRA@0.0213105, 0 0 0 0 ENSG00000238227.1 ENST00000414962.1 chr9:139006575-139007701 2 620 504 intergenic -2.18 0 0,1,1 1 0,0,1 0 0 117.356 15.9677419354839 0 167.623 15.3629032258065 0 215.942 0 0 chimp,horse,human,macaque,orangutan,rabbit, lincRNA processed_transcript A549@6.50706,AG04450@4.67307,BJ@6.89398,GM12878@2.63132,H1HESC@9.97785,HELAS3@12.7276,HEPG2@6.74301,HMEC@11.822,HSMM@8.40118,HUVEC@8.95109,K562@4.77885,MCF7@11.0505,NHEK@6.50522,NHLF@7.23552,SKNSHRA@7.49453, 0 0 0 0 ENSG00000238227.1 ENST00000447934.1 chr9:139008632-139010120 2 646 840 intergenic -0.26 0 0,1,1 0 0,0,1 68.1795665634675 0 0 80.1021671826625 0.642857142857143 18.694 101.665634674923 4.92380952380952 24.193 0 0 chimp,dog,human,macaque,marmoset,orangutan,rabbit, lincRNA processed_transcript A549@6.50706,AG04450@4.67307,BJ@6.89398,GM12878@2.63132,H1HESC@9.97785,HELAS3@12.7276,HEPG2@6.74301,HMEC@11.822,HSMM@8.40118,HUVEC@8.95109,K562@4.77885,MCF7@11.0505,NHEK@6.50522,NHLF@7.23552,SKNSHRA@7.49453, 0 0 0 0 ENSG00000238227.1 ENST00000448040.1 chr9:139008650-139010277 2 579 1046 intergenic 10.59 0 0,1,1 0 0,0,1 64.7530224525043 0 0 78.9879101899827 0.516252390057361 18.694 93.3782383419689 3.95411089866157 24.193 0 0 cat,chimp,cow,dog,elephant,horse,human,macaque,marmoset,mouse,orangutan,panda,rabbit,rat, lincRNA processed_transcript A549@6.50706,AG04450@4.67307,BJ@6.89398,GM12878@2.63132,H1HESC@9.97785,HELAS3@12.7276,HEPG2@6.74301,HMEC@11.822,HSMM@8.40118,HUVEC@8.95109,K562@4.77885,MCF7@11.0505,NHEK@6.50522,NHLF@7.23552,SKNSHRA@7.49453, 0 0 0 0 ENSG00000246129.1 ENST00000498977.1 chr9:139155771-139159083 2 1992 1318 intergenic 3.57 0 0,1,0 0 0,0,0 0 0 0 3.07831325301205 0 1.673 3.23192771084337 0 3.645 0 1 chimp,human,marmoset,orangutan, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0.001331,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000227512.1 ENST00000439501.1 chr9:139437333-139438287 2 862 90 intronic -12.16 0 0,1,0 0 0,0,0 1.17285382830626 0 152.216 9.93503480278422 0 173.246 51.322505800464 0 192.428 0 0 chimp,dog,human,macaque,orangutan, antisense antisense A549@0,AG04450@0,BJ@0,GM12878@0.0306855,H1HESC@0,HELAS3@0,HEPG2@0.003157,HMEC@0,HSMM@0,HUVEC@0.01181,K562@0.0144695,MCF7@0.0047595,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000237886.1 ENST00000429224.1 chr9:139440664-139443901 3 735 2498 intergenic 0.49 0 0,1,0 1 0,0,0 0 17.0388310648519 22.816 18.5850340136054 12.1273018414732 82.25 21.9768707482993 19.2882305844676 82.114 0 0 chimp,cow,dog,elephant,human,macaque,marmoset,orangutan,panda, antisense antisense A549@0.275629,AG04450@0.186013,BJ@0.155676,GM12878@0.0794825,H1HESC@0.288023,HELAS3@0.71839,HEPG2@0.293554,HMEC@0.3301,HSMM@0.0491205,HUVEC@0.13707,K562@0.09159,MCF7@0.168605,NHEK@0.249312,NHLF@0.015746,SKNSHRA@0.622557, 0 0 0 0 ENSG00000237886.1 ENST00000450304.1 chr9:139443582-139444345 2 435 326 intergenic 0.49 0 0,1,0 0 0,0,0 0 0 0 0 0 0 0 0 0 0 0 chimp,human,macaque,marmoset,orangutan, antisense antisense A549@0.275629,AG04450@0.186013,BJ@0.155676,GM12878@0.0794825,H1HESC@0.288023,HELAS3@0.71839,HEPG2@0.293554,HMEC@0.3301,HSMM@0.0491205,HUVEC@0.13707,K562@0.09159,MCF7@0.168605,NHEK@0.249312,NHLF@0.015746,SKNSHRA@0.622557, 0 0 0 0 ENSG00000228401.2 ENST00000411904.1 chr9:139543062-139554873 2 555 11254 intronic -5.00 1 0,0,1 0 0,0,0 0 1.23156211124933 0 0 4.95441620757064 0 0 6.80860138617381 5.282 0 0 chimp,human,macaque,marmoset,orangutan, antisense antisense A549@0.007794,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0.0369805,HEPG2@0,HMEC@0,HSMM@0,HUVEC@1.8361,K562@0.174354,MCF7@0.022148,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000233016.1 ENST00000414282.1 chr9:139615818-139622636 6 2351 4457 exonic 19.13 0 1,1,1 1 0,0,0 38.9430029774564 49.5245680951313 0 61.907273500638 58.8523670630469 10.22 78.5610378562314 81.6724253982499 9.336 0 0 chimp,cow,dog,horse,human,marmoset,orangutan,pig, antisense non_coding A549@8.15788,AG04450@3.77848,BJ@7.25873,GM12878@3.64538,H1HESC@14.0971,HELAS3@11.7606,HEPG2@11.6962,HMEC@5.16925,HSMM@4.1657,HUVEC@18.2371,K562@7.06885,MCF7@10.7464,NHEK@4.57291,NHLF@2.18639,SKNSHRA@3.56015, 0 0 0 0 ENSG00000233016.1 ENST00000416970.1 chr9:139619110-139622636 5 784 2734 intergenic 7.51 0 1,1,1 1 0,0,0 0 0 0 0 15.2051938551573 10.22 0 23.2209217264082 9.336 0 0 chimp,human,macaque,marmoset,orangutan, antisense non_coding A549@8.15788,AG04450@3.77848,BJ@7.25873,GM12878@3.64538,H1HESC@14.0971,HELAS3@11.7606,HEPG2@11.6962,HMEC@5.16925,HSMM@4.1657,HUVEC@18.2371,K562@7.06885,MCF7@10.7464,NHEK@4.57291,NHLF@2.18639,SKNSHRA@3.56015, 0 0 0 0 ENSG00000233016.1 ENST00000436596.1 chr9:139619112-139620935 3 506 1313 intergenic -0.25 0 1,1,1 1 0,0,0 0 0 0 0 18.960396039604 16.676 0 22.2680883472963 34.248 0 0 chimp,human,macaque,marmoset,orangutan, antisense non_coding A549@8.15788,AG04450@3.77848,BJ@7.25873,GM12878@3.64538,H1HESC@14.0971,HELAS3@11.7606,HEPG2@11.6962,HMEC@5.16925,HSMM@4.1657,HUVEC@18.2371,K562@7.06885,MCF7@10.7464,NHEK@4.57291,NHLF@2.18639,SKNSHRA@3.56015, 0 0 0 0 ENSG00000233016.1 ENST00000447221.1 chr9:139619686-139622636 2 2155 793 intergenic 5.97 0 1,1,1 1 0,0,0 0 0 0 19.2904872389791 0 10.22 29.4598607888631 0 9.336 0 0 chimp,human,macaque, antisense non_coding A549@8.15788,AG04450@3.77848,BJ@7.25873,GM12878@3.64538,H1HESC@14.0971,HELAS3@11.7606,HEPG2@11.6962,HMEC@5.16925,HSMM@4.1657,HUVEC@18.2371,K562@7.06885,MCF7@10.7464,NHEK@4.57291,NHLF@2.18639,SKNSHRA@3.56015, 0 0 0 0 ENSG00000228544.1 ENST00000414656.1 chr9:139698379-139703300 5 2381 2532 exonic 10.04 0 0,1,0 0 0,0,0 16.0445191096178 26.8191153238547 0 44.9008819823604 71.6986571879937 20.014 41.6098278034439 77.108214849921 171.099 0 0 cat,chimp,dog,elephant,horse,human,macaque,marmoset,orangutan,panda,pig, antisense antisense A549@0.384139,AG04450@0.264193,BJ@0.45145,GM12878@0.396133,H1HESC@0.407883,HELAS3@2.47158,HEPG2@1.21062,HMEC@0.442965,HSMM@0.436466,HUVEC@0.680315,K562@0.370189,MCF7@1.55251,NHEK@0.340964,NHLF@0.351359,SKNSHRA@0.648166, 0 0 0 0 ENSG00000238268.1 ENST00000413913.1 chr9:139869546-139871433 3 683 1200 intergenic -3.29 0 0,0,1 0 0,0,0 0 0 10.28 0 0 37.719 31.0658857979502 2.72 41.625 0 0 horse,human,macaque,marmoset,orangutan, antisense antisense A549@0.023799,AG04450@0.0141015,BJ@0.0335195,GM12878@0,H1HESC@0.0301455,HELAS3@0.079591,HEPG2@0.023858,HMEC@0,HSMM@0.0654475,HUVEC@0.005095,K562@0.0118495,MCF7@0.0102295,NHEK@0,NHLF@0.021219,SKNSHRA@0.0162145, 0 0 0 0 ENSG00000235117.1 ENST00000457302.1 chr9:139931492-139932407 2 695 218 intergenic 0.31 0 0,0,0 0 0,0,0 0 0 0 0 0 0 10.8115107913669 0 0 0 0 chimp,human,macaque, antisense antisense A549@0.189697,AG04450@0.183746,BJ@0.41215,GM12878@0,H1HESC@0.248318,HELAS3@1.16716,HEPG2@0.588376,HMEC@0.005875,HSMM@0.275381,HUVEC@0.619746,K562@0.0315215,MCF7@2.14907,NHEK@0.140595,NHLF@0.0613075,SKNSHRA@0.409281, 0 0 0 0 ENSG00000228866.1 ENST00000434532.1 chr9:139932430-139933342 2 327 583 intergenic 0.27 0 1,1,1 0 0,0,0 0 0 0 0 0 18.877 0 0 17.701 0 0 chimp,human,macaque,orangutan, antisense antisense A549@0.222708,AG04450@0,BJ@0.0593545,GM12878@0,H1HESC@0.0768705,HELAS3@0.199273,HEPG2@0.0878455,HMEC@0,HSMM@0,HUVEC@0.045228,K562@0,MCF7@0.214852,NHEK@0.024077,NHLF@0.0059305,SKNSHRA@0.11047, 0 0 0 0 ENSG00000236394.1 ENST00000439076.1 chr9:139947226-139947826 2 465 133 intronic -2.93 0 0,0,0 0 0,0,0 0 0 17.02 0 0 72.855 0 29.2330827067669 66.035 0 0 chimp,human,macaque,marmoset,orangutan, antisense antisense A549@0,AG04450@0,BJ@0.015323,GM12878@0,H1HESC@0,HELAS3@0.022732,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0.013202,K562@0,MCF7@0.00861,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000229257.1 ENST00000435463.1 chr9:139952115-139956913 2 299 4497 exonic -1.78 0 0,0,1 0 0,0,0 0 0 0 0 0 0 0 0 0 0 0 chimp,human,macaque,orangutan, antisense antisense A549@0.0112045,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0.008817,HEPG2@0.0238905,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000231864.1 ENST00000456356.1 chr9:139957987-139959033 2 746 298 exonic 0 0 0,1,1 0 0,0,0 0 0 0 0 7.7013422818792 0 0 8.21476510067114 0 0 0 chimp,human,macaque,marmoset,orangutan, antisense antisense A549@0.0501745,AG04450@0,BJ@0.0043265,GM12878@0.0071,H1HESC@0,HELAS3@0.0608675,HEPG2@0.0499115,HMEC@0.037358,HSMM@0,HUVEC@0,K562@0.006567,MCF7@0.0661015,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000185863.6 ENST00000430332.1 chr9:140065310-140066201 3 527 360 intergenic 11.84 1 0,0,1 0 0,0,0 28.1062618595825 0 12.558 84.876660341556 15.4972222222222 515.499 89.8216318785579 16.4361111111111 51.423 0 0 cat,chimp,dog,guinea_pig,horse,human,macaque,marmoset,mouse,orangutan,panda,rat, antisense antisense A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0.012174,HEPG2@0.0093845,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0.007974,NHEK@0,NHLF@0,SKNSHRA@0.003189, 0 0 0 0 ENSG00000185863.6 ENST00000427366.1 chr9:140065380-140066033 2 403 248 intergenic 11.84 1 0,0,1 0 0,0,0 0 0 27.692 32.7667493796526 10.7741935483871 107.697 33.3225806451613 11.4112903225806 89.242 0 0 chimp,dog,guinea_pig,horse,human,macaque,marmoset,orangutan,panda,rat, antisense antisense A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0.012174,HEPG2@0.0093845,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0.007974,NHEK@0,NHLF@0,SKNSHRA@0.003189, 0 0 0 0 ENSG00000185863.6 ENST00000535352.1 chr9:140065380-140066479 4 487 606 intergenic 39.13 1 0,0,1 0 0,0,0 48.2669404517454 6.37623762376238 0 179.632443531828 20.1584158415842 22.039 150.408624229979 22.3745874587459 16.802 0 0 chimp,dog,guinea_pig,horse,human,macaque,marmoset,mouse,orangutan,panda,rat, antisense antisense A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0.012174,HEPG2@0.0093845,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0.007974,NHEK@0,NHLF@0,SKNSHRA@0.003189, 0 0 0 0 ENSG00000185863.6 ENST00000413619.1 chr9:140065380-140066861 4 868 607 intergenic 18.63 1 0,0,1 0 0,0,0 27.0806451612903 6.36573311367381 0 126.360599078341 20.5799011532125 7.705 103.876728110599 22.8138385502471 7.728 0 0 chimp,dog,elephant,guinea_pig,horse,human,macaque,marmoset,mouse,orangutan,panda,rat, antisense antisense A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0.012174,HEPG2@0.0093845,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0.007974,NHEK@0,NHLF@0,SKNSHRA@0.003189, 0 0 0 0 ENSG00000244769.1 ENST00000501337.1 chr9:140118567-140122265 2 2905 791 exonic 5.98 0 0,0,1 0 0,0,0 9.58175559380379 0 16.812 32.3951807228916 2.8621997471555 87.21 31.8426850258176 2.92288242730721 82.46 0 0 chimp,dog,human,macaque,marmoset,panda, lincRNA lincRNA A549@0.148254,AG04450@0.0322355,BJ@0.0479205,GM12878@0.0317205,H1HESC@0.191246,HELAS3@0.366815,HEPG2@0.872066,HMEC@0.023945,HSMM@0.261251,HUVEC@0.250762,K562@0.0282685,MCF7@0.76835,NHEK@0.0393703,NHLF@0.0802495,SKNSHRA@0.552068, 0 0 0 0 ENSG00000256529.1 ENST00000416962.2 chr9:140144671-140147949 4 1697 1575 exonic 6.11 0 0,1,1 0 0,0,0 10.2981732469063 0 0 45.0383028874484 12.3015873015873 0.992 53.9180907483795 17.7155555555556 1.004 0 0 chimp,cow,horse,human,macaque,marmoset,orangutan, lincRNA lincRNA A549@0.0341505,AG04450@0.0416785,BJ@0.062667,GM12878@0.0653585,H1HESC@0.233328,HELAS3@0.170333,HEPG2@0.126305,HMEC@0.021665,HSMM@0.013379,HUVEC@0.050006,K562@0.21431,MCF7@0.246522,NHEK@0.0140267,NHLF@0.0149845,SKNSHRA@0.304906, 0 0 0 0 ENSG00000244951.1 ENST00000499819.1 chr9:140503038-140506038 2 2548 450 intronic 4.58 0 0,0,0 0 0,0,0 0 0 0 0 0 9.304 0 0 10.671 0 1 chimp,human,orangutan, lincRNA lincRNA A549@0.207271,AG04450@0.10681,BJ@0.156178,GM12878@0.139793,H1HESC@0.079328,HELAS3@0.260651,HEPG2@0.220465,HMEC@0.008029,HSMM@0.0880065,HUVEC@0.134203,K562@0.059125,MCF7@0.254672,NHEK@0.0212343,NHLF@0.0843165,SKNSHRA@0.256707, 0 0 0 0 ENSG00000237419.1 ENST00000428088.1 chr9:141090383-141093775 2 536 2854 intergenic 12.44 0 0,1,0 0 0,0,0 0 0 0 0 0 0 0 0 0 0 0 chimp,human, lincRNA lincRNA A549@0,AG04450@0,BJ@0.0301785,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0.015222,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0.014346,SKNSHRA@0, 0 0 0 0 ENSG00000233013.3 ENST00000540522.1 chr9:141106637-141134172 7 1271 26252 intergenic 58.71 0 0,0,0 0 0,0,1 0 0 0 0 0.191185433490782 0 27.2856018882769 1.83875514246534 0 0 1 chimp,human,marmoset,orangutan, processed_transcript processed_transcript A549@1.12683,AG04450@0.422469,BJ@0.639244,GM12878@0.722479,H1HESC@3.03437,HELAS3@0.963846,HEPG2@1.77536,HMEC@0.817288,HSMM@0.278341,HUVEC@0.816633,K562@4.93383,MCF7@2.99821,NHEK@1.22561,NHLF@0.189432,SKNSHRA@0.714309, 0 0 54 2 ENSG00000233013.3 ENST00000446912.1 chr9:141107518-141149300 10 1826 39938 intergenic 18.53 0 0,0,0 0 0,0,1 0 0 0 0 0.125669788171666 0 54.5936473165389 2.96822574991236 0 0 0 chimp,human,macaque, processed_transcript processed_transcript A549@1.12683,AG04450@0.422469,BJ@0.639244,GM12878@0.722479,H1HESC@3.03437,HELAS3@0.963846,HEPG2@1.77536,HMEC@0.817288,HSMM@0.278341,HUVEC@0.816633,K562@4.93383,MCF7@2.99821,NHEK@1.22561,NHLF@0.189432,SKNSHRA@0.714309, 18 4 0 0 ENSG00000226179.1 ENST00000391707.2 chrX:281725-282586 2 426 433 intergenic -7.26 0 0,0,0 0 0,0,0 0 0 0 0 0 0 46.2159624413146 94.891454965358 0 0 0 human, antisense non_coding A549@0.161352,AG04450@0.230549,BJ@0.206769,GM12878@0.353017,H1HESC@0.371301,HELAS3@0.133071,HEPG2@0.200884,HMEC@0.258306,HSMM@0.193714,HUVEC@0.176044,K562@0.184673,MCF7@0.290269,NHEK@0.361977,NHLF@0.357669,SKNSHRA@0.79589, 0 0 0 0 ENSG00000237531.1 ENST00000420865.1 chrX:950956-955100 2 586 3556 intergenic 2.70 0 0,1,0 0 0,0,0 0 0 0 0 0 0 115.474402730375 1.38160854893138 2.916 0 0 human,macaque,orangutan, lincRNA lincRNA A549@0.128477,AG04450@0,BJ@0.0483325,GM12878@0.44406,H1HESC@0.055702,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0.013997,HUVEC@0,K562@0.079579,MCF7@0.048644,NHEK@0,NHLF@0.0032815,SKNSHRA@0.027894, 140 2 85 2 ENSG00000236871.1 ENST00000434938.1 chrX:1515320-1517852 2 355 2175 intergenic -8.65 0 0,1,1 0 0,0,0 0 0 0 0 0 0 0 81.183908045977 0 0 0 human,macaque,marmoset,orangutan, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 186 2 120 2 ENSG00000236871.1 ENST00000430235.1 chrX:1515918-1518295 3 367 2006 intergenic 0.26 0 0,1,0 0 0,0,0 0 0 0 0 0 0 11.9073569482289 85.6271186440678 0 0 0 human,orangutan, lincRNA non_coding A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 184 2 119 2 ENSG00000236017.2 ENST00000443929.1 chrX:1520662-1522386 2 572 1150 exonic 1.16 0 0,0,1 0 0,0,0 0 0 0 0 0 0 180.743006993007 247.015652173913 0 0 0 human,macaque, antisense antisense A549@0.368629,AG04450@0.158627,BJ@0.324426,GM12878@0.218095,H1HESC@0.25584,HELAS3@0.203487,HEPG2@0.281769,HMEC@0.287563,HSMM@0.308927,HUVEC@0.489189,K562@0.0869885,MCF7@0.28768,NHEK@0.263135,NHLF@0.197367,SKNSHRA@0.529659, 0 0 0 0 ENSG00000236017.2 ENST00000425740.2 chrX:1520704-1532808 4 836 11262 exonic 5.71 0 0,0,1 0 0,0,0 0 0 0 0 0 0 166.117224880383 28.4577339726514 0 0 0 horse,human,orangutan, antisense antisense A549@0.368629,AG04450@0.158627,BJ@0.324426,GM12878@0.218095,H1HESC@0.25584,HELAS3@0.203487,HEPG2@0.281769,HMEC@0.287563,HSMM@0.308927,HUVEC@0.489189,K562@0.0869885,MCF7@0.28768,NHEK@0.263135,NHLF@0.197367,SKNSHRA@0.529659, 0 0 0 0 ENSG00000236017.2 ENST00000419737.1 chrX:1520814-1534319 6 1750 11745 exonic 5.71 0 0,1,0 0 0,0,0 0 0 0 0 0 0 46.5891428571429 29.0628352490421 35.288 0 0 human, antisense non_coding A549@0.368629,AG04450@0.158627,BJ@0.324426,GM12878@0.218095,H1HESC@0.25584,HELAS3@0.203487,HEPG2@0.281769,HMEC@0.287563,HSMM@0.308927,HUVEC@0.489189,K562@0.0869885,MCF7@0.28768,NHEK@0.263135,NHLF@0.197367,SKNSHRA@0.529659, 0 0 0 0 ENSG00000236017.2 ENST00000420411.1 chrX:1520936-1534314 4 920 12452 exonic 5.71 0 0,0,0 0 0,0,0 0 0 0 0 0 0 58.9815217391304 25.7381143591391 84.21 0 0 elephant,human, antisense antisense A549@0.368629,AG04450@0.158627,BJ@0.324426,GM12878@0.218095,H1HESC@0.25584,HELAS3@0.203487,HEPG2@0.281769,HMEC@0.287563,HSMM@0.308927,HUVEC@0.489189,K562@0.0869885,MCF7@0.28768,NHEK@0.263135,NHLF@0.197367,SKNSHRA@0.529659, 101 2 56 2 ENSG00000223511.1 ENST00000427886.1 chrX:1851477-1860881 3 442 8958 intergenic -5.50 0 0,0,0 0 0,0,0 0 0 0 0 0 0 0 0 0 0 0 human,orangutan, lincRNA lincRNA A549@0.094707,AG04450@0.0133055,BJ@0.01267,GM12878@0.504932,H1HESC@0.0213435,HELAS3@0.00938,HEPG2@0.019557,HMEC@0.010719,HSMM@0,HUVEC@0.160246,K562@0,MCF7@0,NHEK@0.199082,NHLF@0,SKNSHRA@0.278774, 171 2 111 2 ENSG00000223511.1 ENST00000432272.1 chrX:1853010-1874878 2 380 21486 intergenic -0.38 0 0,0,0 0 0,0,0 0 1.38136460951317 0 0 0 0 0 4.01103043842502 0 0 0 human,marmoset,orangutan, lincRNA lincRNA A549@0.094707,AG04450@0.0133055,BJ@0.01267,GM12878@0.504932,H1HESC@0.0213435,HELAS3@0.00938,HEPG2@0.019557,HMEC@0.010719,HSMM@0,HUVEC@0.160246,K562@0,MCF7@0,NHEK@0.199082,NHLF@0,SKNSHRA@0.278774, 0 0 0 0 ENSG00000234622.1 ENST00000453953.1 chrX:1886240-1887669 2 546 881 intergenic 1.37 0 0,0,0 0 0,0,0 0 0 0 0 0 0 0 0 0 0 0 human,macaque,marmoset,orangutan, lincRNA lincRNA A549@0.010081,AG04450@0,BJ@0,GM12878@0.051176,H1HESC@0,HELAS3@0,HEPG2@0.011911,HMEC@0,HSMM@0,HUVEC@0.009746,K562@0,MCF7@0,NHEK@0.03325,NHLF@0,SKNSHRA@0.0572415, 149 2 0 0 ENSG00000223571.1 ENST00000437244.1 chrX:2252336-2254451 2 649 1464 intronic -3.89 0 0,0,0 0 0,0,0 0 0 0 0 0 0 0 0 0 0 0 chimp,human,macaque,orangutan, sense_intronic sense_intronic A549@0.031164,AG04450@0.0347305,BJ@0.035316,GM12878@0.00863,H1HESC@0.071914,HELAS3@0.035066,HEPG2@0.0260985,HMEC@0.007046,HSMM@0.053954,HUVEC@0.0429485,K562@0.003698,MCF7@0.0075645,NHEK@0.00236333,NHLF@0.0173385,SKNSHRA@0.0262965, 132 2 0 0 ENSG00000230542.1 ENST00000445785.1 chrX:2531029-2533388 2 1338 1019 intergenic 0.77 1 0,0,0 0 0,0,0 0 0 0 0 0 0 0 0 0 0 0 chimp,human,macaque,orangutan, lincRNA non_coding A549@0,AG04450@0.0096255,BJ@0.00534,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0.0156495,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000235483.1 ENST00000445107.1 chrX:2770781-2771801 2 513 505 intronic -1.43 0 0,0,0 0 0,0,0 0 0 0 79.317738791423 0 26.33 379.460038986355 18 60.106 0 0 cat,chimp,cow,dog,elephant,guinea_pig,horse,human,macaque,marmoset,mouse,opossum,orangutan,panda,pig,platypus,rabbit,rat, antisense antisense A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000229851.1 ENST00000414053.1 chrX:2822945-2824122 2 814 361 exonic -1.78 0 0,1,1 0 0,0,0 0 0 0 0 0 0 0 0 0 0 0 human,macaque,marmoset,orangutan, antisense antisense A549@0.082267,AG04450@0.018787,BJ@0.0079315,GM12878@0,H1HESC@0.0778075,HELAS3@0.0716145,HEPG2@0.0516815,HMEC@0,HSMM@0.0204445,HUVEC@0,K562@0.074097,MCF7@0.112894,NHEK@0,NHLF@0,SKNSHRA@0.0154495, 0 0 0 0 ENSG00000236188.1 ENST00000414074.1 chrX:3577528-3586233 3 513 8188 intronic 0 0 0,0,0 0 0,0,0 0 0 0 0 0 0 0 0 0 0 0 chimp,human,macaque,marmoset,orangutan, antisense antisense A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000234449.1 ENST00000381108.3 chrX:3771051-3781615 3 2195 8365 intergenic -0.48 0 0,0,1 0 0,0,0 0 0 0 0 0 0 12.5630979498861 1.51093843395099 32.172 0 0 chimp,human,macaque,orangutan, lincRNA processed_transcript A549@5.58456,AG04450@8.26197,BJ@2.98666,GM12878@27.7443,H1HESC@13.8415,HELAS3@7.52386,HEPG2@6.08435,HMEC@2.67942,HSMM@1.74477,HUVEC@6.71221,K562@30.613,MCF7@6.07358,NHEK@42.1223,NHLF@8.34099,SKNSHRA@29.4218, 34 3 0 0 ENSG00000234449.1 ENST00000456563.1 chrX:3772390-3785176 2 791 11993 intergenic 2.02 0 0,0,0 0 0,0,0 0 0 0 0 0 0 36.6624525916561 6.09964145751688 152.3 0 0 chimp,human,macaque,marmoset,orangutan, lincRNA processed_transcript A549@5.58456,AG04450@8.26197,BJ@2.98666,GM12878@27.7443,H1HESC@13.8415,HELAS3@7.52386,HEPG2@6.08435,HMEC@2.67942,HSMM@1.74477,HUVEC@6.71221,K562@30.613,MCF7@6.07358,NHEK@42.1223,NHLF@8.34099,SKNSHRA@29.4218, 0 0 0 0 ENSG00000234449.1 ENST00000432445.1 chrX:3772909-3785324 2 488 11925 intergenic -0.92 0 0,0,0 0 0,0,0 0 0 0 0 0 0 186.577868852459 6.13442348008386 90.2 0 0 chimp,cow,dog,elephant,human,macaque,marmoset,orangutan,pig,platypus,rabbit, lincRNA processed_transcript A549@5.58456,AG04450@8.26197,BJ@2.98666,GM12878@27.7443,H1HESC@13.8415,HELAS3@7.52386,HEPG2@6.08435,HMEC@2.67942,HSMM@1.74477,HUVEC@6.71221,K562@30.613,MCF7@6.07358,NHEK@42.1223,NHLF@8.34099,SKNSHRA@29.4218, 0 0 0 0 ENSG00000234449.1 ENST00000438107.1 chrX:3782439-3800358 3 2152 15763 encompassing 24.31 0 0,0,0 0 0,0,0 0 0 0 0 0 0 84.4795539033457 6.09725306096555 0 0 0 chimp,human,macaque,marmoset,orangutan, lincRNA processed_transcript A549@5.58456,AG04450@8.26197,BJ@2.98666,GM12878@27.7443,H1HESC@13.8415,HELAS3@7.52386,HEPG2@6.08435,HMEC@2.67942,HSMM@1.74477,HUVEC@6.71221,K562@30.613,MCF7@6.07358,NHEK@42.1223,NHLF@8.34099,SKNSHRA@29.4218, 71 2 40 2 ENSG00000205663.4 ENST00000424415.1 chrX:3809479-3820041 3 2191 8367 intergenic -0.48 0 0,0,0 0 0,0,0 0 0 0 0 0 0 12.7832040164309 0.865423688299271 34.232 0 0 chimp,human,macaque,orangutan, lincRNA processed_transcript A549@8.89327,AG04450@4.15535,BJ@5.44956,GM12878@22.7495,H1HESC@14.4211,HELAS3@6.66054,HEPG2@7.77453,HMEC@1.85027,HSMM@1.28931,HUVEC@6.67648,K562@25.9257,MCF7@6.32024,NHEK@23.9754,NHLF@7.67623,SKNSHRA@32.7062, 34 3 0 0 ENSG00000205663.4 ENST00000457936.1 chrX:3811139-3823602 2 466 11995 intergenic 3.97 0 0,0,0 0 0,0,0 0 0 0 0 0 0 68.2081545064378 5.85735723218007 151.028 0 0 chimp,dog,human,macaque,orangutan, lincRNA processed_transcript A549@8.89327,AG04450@4.15535,BJ@5.44956,GM12878@22.7495,H1HESC@14.4211,HELAS3@6.66054,HEPG2@7.77453,HMEC@1.85027,HSMM@1.28931,HUVEC@6.67648,K562@25.9257,MCF7@6.32024,NHEK@23.9754,NHLF@7.67623,SKNSHRA@32.7062, 0 0 0 0 ENSG00000205663.4 ENST00000451781.1 chrX:3811333-3823750 2 488 11927 intergenic 1.03 0 0,0,0 0 0,0,0 0 0 0 0 0 0 186.879098360656 5.89075207512367 91.56 0 0 chimp,cow,dog,elephant,human,macaque,marmoset,orangutan,pig,platypus,rabbit, lincRNA processed_transcript A549@8.89327,AG04450@4.15535,BJ@5.44956,GM12878@22.7495,H1HESC@14.4211,HELAS3@6.66054,HEPG2@7.77453,HMEC@1.85027,HSMM@1.28931,HUVEC@6.67648,K562@25.9257,MCF7@6.32024,NHEK@23.9754,NHLF@7.67623,SKNSHRA@32.7062, 0 0 0 0 ENSG00000205663.4 ENST00000381106.3 chrX:3820866-3838787 3 2152 15765 encompassing 17.16 0 0,0,0 0 0,0,0 0 0 0 0 0 0 85.1775092936803 20.904979384713 0 0 0 chimp,human,macaque,marmoset,orangutan, lincRNA processed_transcript A549@8.89327,AG04450@4.15535,BJ@5.44956,GM12878@22.7495,H1HESC@14.4211,HELAS3@6.66054,HEPG2@7.77453,HMEC@1.85027,HSMM@1.28931,HUVEC@6.67648,K562@25.9257,MCF7@6.32024,NHEK@23.9754,NHLF@7.67623,SKNSHRA@32.7062, 71 2 40 2 ENSG00000205662.2 ENST00000381105.2 chrX:3847910-3855896 2 2116 5868 intergenic -0.48 0 0,0,0 0 0,0,0 0 0 0 0 0 0 0 0 439.677 0 0 chimp,human,macaque,orangutan, lincRNA lincRNA A549@1.80356,AG04450@1.18925,BJ@0.722571,GM12878@6.48346,H1HESC@3.29028,HELAS3@1.56942,HEPG2@1.48842,HMEC@0.009666,HSMM@0,HUVEC@1.27946,K562@9.96552,MCF7@0.699021,NHEK@7.40484,NHLF@2.26482,SKNSHRA@9.91972, 34 3 0 0 ENSG00000236513.1 ENST00000420725.1 chrX:4545241-4551613 3 1181 5187 intergenic -0.14 1 0,0,0 0 0,0,0 9.37933954276037 0 0 4.55292125317527 0 0 4.56900931414056 0 0 0 0 chimp,dog,elephant,horse,human,marmoset,orangutan, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0.0512165,H1HESC@0,HELAS3@0.0022415,HEPG2@0.003675,HMEC@0,HSMM@0,HUVEC@0,K562@0.012446,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000236120.1 ENST00000444185.1 chrX:5571462-5643998 4 624 71906 intergenic -2.18 1 0,0,0 0 0,0,0 0 0.580883375518037 0 0 0.520818846827803 0 0 9.95100547937585 0 0 0 chimp,cow,horse,human,macaque,marmoset,orangutan, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0.0222405,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0.699895,HSMM@0.020689,HUVEC@0,K562@0,MCF7@0,NHEK@0.550649,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000236120.1 ENST00000422914.1 chrX:5571462-5644346 3 857 72023 intergenic 4.48 1 0,0,0 0 0,0,0 0 0.579939741471474 0 0 0.519972786470988 0 0 9.93484025936159 0 0 0 chimp,horse,human,macaque,marmoset,orangutan,pig, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0.0222405,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0.699895,HSMM@0.020689,HUVEC@0,K562@0,MCF7@0,NHEK@0.550649,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000236120.1 ENST00000456559.1 chrX:5571464-5644121 3 443 72210 intergenic -2.18 1 0,1,0 0 0,0,0 0 0.57843788948899 0 0 0.518626229054148 0 0 9.90911231131422 0 0 0 chimp,horse,human,macaque,marmoset,orangutan, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0.0222405,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0.699895,HSMM@0.020689,HUVEC@0,K562@0,MCF7@0,NHEK@0.550649,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000231217.1 ENST00000438499.1 chrX:6585906-6639585 3 514 53161 intergenic -11.32 0 0,1,1 0 0,0,0 31.5875486381323 2.89447151107015 0 0 2.2957619307387 0 0 3.11935441395008 0 0 0 chimp,cow,dog,horse,human,macaque,marmoset,orangutan, lincRNA lincRNA A549@0.006004,AG04450@0,BJ@0.0141235,GM12878@0.149008,H1HESC@0.129786,HELAS3@0.026223,HEPG2@0.008242,HMEC@0,HSMM@0.0295765,HUVEC@0.017269,K562@0.045437,MCF7@0.047315,NHEK@0.04089,NHLF@0.01128,SKNSHRA@0.0639115, 0 0 0 0 ENSG00000230394.1 ENST00000422160.1 chrX:7975419-7986201 2 175 10605 intergenic -4.84 0 0,0,0 0 0,0,0 0 0 0 0 0.371994342291372 0 0 0.653465346534653 0 0 0 chimp,human,macaque,marmoset,orangutan, lincRNA lincRNA A549@0,AG04450@0,BJ@0.060642,GM12878@0.301767,H1HESC@0.188212,HELAS3@0.149942,HEPG2@0.0428595,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0.0113585,NHEK@0.0260517,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000229012.1 ENST00000440430.1 chrX:8831902-8835642 3 463 3273 intergenic -3.45 1 0,0,0 0 0,0,0 0 0 0 0 0 0 0 0 0 0 0 chimp,human,macaque,marmoset,orangutan, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0.005695,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000228543.1 ENST00000432442.1 chrX:9217960-9243246 2 1713 23571 intergenic 14.24 0 0,0,0 0 0,0,0 8.10741389375365 12.5642951083959 0 5.61704611792177 7.70018242755929 0 53.7116170461179 10.0135335793984 0 0 0 chimp,human,macaque,marmoset,orangutan,rat, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0.004076,K562@0.002864,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000225076.1 ENST00000430057.1 chrX:9992882-10006694 2 576 13234 intronic -4.31 0 0,0,0 0 0,0,0 0 6.29250415596192 0 0 3.48398065588635 0 0 4.24633519721928 0 0 0 human,macaque,marmoset, antisense antisense A549@0.004779,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000227042.1 ENST00000454113.1 chrX:10210379-10333363 5 606 122370 intergenic 4.77 0 0,0,0 0 0,0,0 14.8844884488449 13.77538612405 0 22.5247524752475 10.1715534853314 1.984 22.0742574257426 10.539503146196 2.065 0 0 chimp,dog,guinea_pig,horse,human,macaque,marmoset,orangutan,pig, lincRNA lincRNA A549@0.0304825,AG04450@0,BJ@0,GM12878@0.004346,H1HESC@0.0441315,HELAS3@0.0086875,HEPG2@0.0191805,HMEC@0,HSMM@0,HUVEC@0.027251,K562@0,MCF7@0.010095,NHEK@0,NHLF@0,SKNSHRA@0.0236835, 0 0 0 0 ENSG00000234129.1 ENST00000433747.1 chrX:10981960-11129258 5 606 146684 intergenic 0.38 0 0,1,0 1 0,0,0 0 18.0151141228764 0 0 19.1085462627144 20.577 0 18.0567682910202 26.09 0 0 cat,chimp,cow,dog,elephant,guinea_pig,horse,human,macaque,marmoset,orangutan,panda,pig, lincRNA processed_transcript A549@1.00892,AG04450@0.290799,BJ@0.339525,GM12878@1.17975,H1HESC@0.583956,HELAS3@0.846135,HEPG2@0.44758,HMEC@0.120627,HSMM@0.085643,HUVEC@0.124212,K562@2.51785,MCF7@0.433013,NHEK@0.325166,NHLF@0.108222,SKNSHRA@0.290243, 0 0 0 0 ENSG00000223487.1 ENST00000425057.1 chrX:12391286-12393252 2 283 1681 intronic 0.70 0 0,0,0 0 0,0,0 50.565371024735 79.4806662700773 0 21.2049469964664 87.8869720404521 0 21.8056537102473 73.3884592504462 0 0 0 chimp,cow,horse,human,macaque,marmoset,orangutan,pig, antisense antisense A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0.0144395,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000233338.1 ENST00000451564.1 chrX:12920936-12926452 3 1346 4166 intronic 1.90 1 0,0,1 0 0,0,0 0 0 0 0 6.44815170427268 0 0 6.33533365338454 0 0 0 chimp,human,macaque,marmoset,orangutan, antisense antisense A549@0,AG04450@0,BJ@0,GM12878@0.012928,H1HESC@0.082761,HELAS3@0.014058,HEPG2@0,HMEC@0,HSMM@0.0030505,HUVEC@0.049608,K562@0.51317,MCF7@0.0227945,NHEK@0,NHLF@0,SKNSHRA@0.036351, 0 0 0 0 ENSG00000235385.1 ENST00000412485.1 chrX:13284167-13321511 3 1494 35846 intergenic 2.10 1 1,1,1 0 0,0,0 151.896921017403 10.2437649946995 0 39.5100401606426 5.28867935055515 0 67.9109772423025 5.60176867711879 0 0 0 chimp,cow,dog,elephant,horse,human,macaque,marmoset,opossum,orangutan,panda,pig,rat, lincRNA lincRNA A549@0.0318055,AG04450@0.0190065,BJ@0.015895,GM12878@0.427636,H1HESC@0.0263155,HELAS3@0.0110265,HEPG2@0.00436,HMEC@0.048601,HSMM@0.0290155,HUVEC@0.133155,K562@0.0566395,MCF7@0.059996,NHEK@0.145208,NHLF@0.135988,SKNSHRA@10.6694, 0 0 0 0 ENSG00000235385.1 ENST00000443965.1 chrX:13284661-13321571 2 925 35983 intergenic 2.10 0 0,1,0 0 0,0,0 208.283243243243 10.2047633604758 0 51.267027027027 5.26854347886502 0 94.6886486486487 5.58044076369397 0 0 0 chimp,cow,dog,elephant,horse,human,macaque,marmoset,opossum,orangutan,panda,pig, lincRNA lincRNA A549@0.0318055,AG04450@0.0190065,BJ@0.015895,GM12878@0.427636,H1HESC@0.0263155,HELAS3@0.0110265,HEPG2@0.00436,HMEC@0.048601,HSMM@0.0290155,HUVEC@0.133155,K562@0.0566395,MCF7@0.059996,NHEK@0.145208,NHLF@0.135988,SKNSHRA@10.6694, 0 0 0 0 ENSG00000231216.1 ENST00000431486.1 chrX:13328771-13338052 17 2232 7017 exonic 9.70 0 0,0,0 0 0,0,0 0 0 0 0 0 0 127.426523297491 9.82898674647285 0 0 0 human,macaque,orangutan, antisense antisense A549@0,AG04450@0.006161,BJ@0.002878,GM12878@0.220645,H1HESC@0,HELAS3@0.0039345,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0.013197,K562@5.49528,MCF7@0.002702,NHEK@0.00205033,NHLF@0,SKNSHRA@0.111908, 0 0 0 0 ENSG00000226985.1 ENST00000419566.1 chrX:13353360-13359944 7 573 5999 intergenic 1.51 0 0,1,0 0 0,0,0 14.5898778359511 3.40723453908985 0 10.8429319371728 7.98066344390732 0 10.7766143106457 8.07117852975496 0 0 0 chimp,human,macaque,orangutan, lincRNA lincRNA A549@0,AG04450@0.0094175,BJ@0,GM12878@0.102721,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0.0125045,K562@3.18668,MCF7@0,NHEK@0.043875,NHLF@0,SKNSHRA@0.0190745, 0 0 0 0 ENSG00000226985.1 ENST00000456091.1 chrX:13354500-13391753 4 472 36775 intergenic 5.89 0 0,1,0 0 0,0,0 0 11.9176886471788 0 0 8.97422161794698 0 0 7.27078178110129 0 0 0 chimp,human,macaque,marmoset,orangutan,panda, lincRNA lincRNA A549@0,AG04450@0.0094175,BJ@0,GM12878@0.102721,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0.0125045,K562@3.18668,MCF7@0,NHEK@0.043875,NHLF@0,SKNSHRA@0.0190745, 0 0 0 0 ENSG00000226434.1 ENST00000446964.1 chrX:13395307-13421138 2 451 25378 intergenic 0 0 0,1,1 0 0,0,0 99.7383592017738 10.0505950035464 6.732 0 11.3072346126566 0 0 19.4555914571676 0 0 0 chimp,human,macaque,orangutan, lincRNA lincRNA A549@0.0047915,AG04450@0.0108155,BJ@0,GM12878@0.061558,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0.311427,HUVEC@0.025133,K562@0.66378,MCF7@0.0047305,NHEK@0.0244403,NHLF@0.022802,SKNSHRA@0.021354, 0 0 0 0 ENSG00000226434.1 ENST00000420403.1 chrX:13413379-13421125 2 423 7321 intergenic -0.93 0 0,1,1 0 0,0,0 0 9.70741701953285 0 0 10.0878295314848 0 0 9.46769566999044 0 0 0 human,macaque,marmoset,orangutan, lincRNA lincRNA A549@0.0047915,AG04450@0.0108155,BJ@0,GM12878@0.061558,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0.311427,HUVEC@0.025133,K562@0.66378,MCF7@0.0047305,NHEK@0.0244403,NHLF@0.022802,SKNSHRA@0.021354, 0 0 0 0 ENSG00000225374.1 ENST00000434674.1 chrX:13785519-13785984 2 410 53 intronic 0 0 0,1,0 0 0,0,0 0 0 43.05 0 0 5.202 0 0 20.255 0 0 chimp,horse,human,macaque,marmoset,orangutan,panda, antisense antisense A549@0.329848,AG04450@0.080795,BJ@0.022558,GM12878@2.45686,H1HESC@0.096325,HELAS3@1.58794,HEPG2@0.837889,HMEC@0,HSMM@0.0132245,HUVEC@0.0751305,K562@0.720727,MCF7@0.459433,NHEK@0.284945,NHLF@0.0182785,SKNSHRA@0.314414, 0 0 0 0 ENSG00000233535.1 ENST00000448948.1 chrX:13973512-13982023 2 694 7815 intergenic -2.33 0 0,0,1 0 0,0,0 2.31988472622478 7.49891234804862 53.762 0 1.83288547664747 76.798 7.70317002881844 3.42367242482406 60.141 0 0 chimp,cow,dog,guinea_pig,human,macaque,orangutan,panda,pig, lincRNA lincRNA A549@0,AG04450@0,BJ@0.0205625,GM12878@0.439184,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0.07246,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000212663.2 ENST00000391359.2 chrX:13998185-14006939 2 542 8210 intergenic -2.80 0 0,0,0 0 0,0,0 0 3.08112058465286 0 0 2.96650426309379 0 0 4.44665042630938 0 0 0 chimp,guinea_pig,human,macaque,marmoset,orangutan, lincRNA lincRNA A549@0.0101895,AG04450@0,BJ@0,GM12878@0.0203375,H1HESC@0.010926,HELAS3@0,HEPG2@0.0119985,HMEC@0,HSMM@0,HUVEC@0,K562@0.0085365,MCF7@0,NHEK@0.00827433,NHLF@0,SKNSHRA@0.008356, 1 96 0 0 ENSG00000225833.1 ENST00000421585.1 chrX:15621004-15639607 2 572 18029 intergenic -2.26 1 0,0,0 0 0,0,0 0 1.82572522047812 0 0 2.61462088856842 37.762 0 2.92073880969549 37.131 0 0 cat,chimp,cow,dog,horse,human,macaque,marmoset,orangutan,panda, antisense antisense A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0.0074235,HMEC@0,HSMM@0,HUVEC@0,K562@0.0046645,MCF7@0.152914,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000240178.1 ENST00000463076.1 chrX:15801328-15802658 2 673 655 exonic -7.21 0 0,1,0 0 0,0,0 0 0 0 0 0 0 0 0 0 0 0 cat,chimp,cow,dog,elephant,horse,human,macaque,marmoset,orangutan,panda,pig,rabbit, antisense antisense A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000238178.1 ENST00000422438.1 chrX:16171064-16175952 4 388 4494 exonic 3.86 0 0,0,0 0 0,0,0 0 28.7538940809969 0 5.69072164948454 24.6372941700045 11.385 7.16494845360825 26.4267912772586 9.207 0 0 cat,chimp,cow,elephant,guinea_pig,horse,human,macaque,marmoset,orangutan,rabbit, antisense antisense A549@0,AG04450@0,BJ@0,GM12878@1.18799,H1HESC@0.052446,HELAS3@0.0226855,HEPG2@0.013715,HMEC@0,HSMM@0,HUVEC@0.0033705,K562@6.70192,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0.783071, 0 0 0 0 ENSG00000238178.1 ENST00000454712.1 chrX:16171343-16183244 4 450 11445 intergenic 2.48 0 0,0,1 1 0,0,0 0 18.054871122761 0 0 17.8500655307995 0 0 16.6240279598078 0 0 0 cat,chimp,cow,dog,elephant,guinea_pig,horse,human,macaque,marmoset,orangutan,rabbit, antisense antisense A549@0,AG04450@0,BJ@0,GM12878@1.18799,H1HESC@0.052446,HELAS3@0.0226855,HEPG2@0.013715,HMEC@0,HSMM@0,HUVEC@0.0033705,K562@6.70192,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0.783071, 0 0 0 0 ENSG00000238178.1 ENST00000435789.1 chrX:16171343-16188992 6 1031 16608 exonic 2.48 0 0,0,1 0 0,0,0 0 12.4420761078998 0 0 12.9552625240848 4.925 0 12.1153058766859 4.909 0 0 chimp,elephant,horse,human,macaque,marmoset,mouse,orangutan, antisense antisense A549@0,AG04450@0,BJ@0,GM12878@1.18799,H1HESC@0.052446,HELAS3@0.0226855,HEPG2@0.013715,HMEC@0,HSMM@0,HUVEC@0.0033705,K562@6.70192,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0.783071, 0 0 0 0 ENSG00000235834.1 ENST00000433228.1 chrX:17546558-17605281 2 1552 57169 intronic -0.75 1 0,0,0 0 0,0,0 0 29.3041683429831 64.4 1.2319587628866 22.2371914848957 26.184 2.38981958762887 20.6188668684077 22.405 0 0 chimp,elephant,horse,human,macaque,marmoset,orangutan,panda,pig, sense_intronic sense_intronic A549@0.510914,AG04450@0.138128,BJ@0.0517355,GM12878@0.0017015,H1HESC@0.271577,HELAS3@0.37085,HEPG2@0.0590465,HMEC@0,HSMM@0,HUVEC@0,K562@0.001754,MCF7@0.24842,NHEK@0.400398,NHLF@0,SKNSHRA@0.0887965, 0 0 0 0 ENSG00000230020.1 ENST00000452788.1 chrX:17570470-17575508 2 364 4672 intronic -2.41 0 0,1,0 0 0,0,0 0 73.9567636986301 0 0 42.1322773972603 4.063 0 42.3491010273973 4.131 0 0 human, antisense antisense A549@0.077099,AG04450@0.0558175,BJ@0.0132235,GM12878@0,H1HESC@0.013522,HELAS3@0.037678,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0.0105827,NHLF@0,SKNSHRA@0.026216, 0 0 0 0 ENSG00000225882.1 ENST00000453902.1 chrX:17988317-18122764 5 703 133736 intergenic 0 0 0,1,0 0 0,0,0 42.049786628734 19.1966635760005 0 23.3129445234708 26.6868606807442 0 23.6116642958748 25.6921247831549 0 0 0 chimp,cow,dog,horse,human,macaque,marmoset,mouse,orangutan,pig,rabbit,rat, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0.27886,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0.776969,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000237221.1 ENST00000430641.1 chrX:18706762-18709723 2 428 2531 intronic -1.70 0 0,0,1 0 0,0,0 0 0 12.19 4.17056074766355 4.44093243777163 30.338 5.57242990654206 4.9585144211774 30.19 0 0 chimp,human,macaque,orangutan, antisense antisense A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0.0054355,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000237836.1 ENST00000452900.1 chrX:18908414-18912453 3 653 3382 exonic -2.77 0 0,0,1 0 0,0,0 91.4180704441041 36.4036073329391 0 104.514548238897 33.3696037847428 17.54 121.286370597243 33.6173861620343 18.524 0 0 chimp,cow,dog,elephant,guinea_pig,horse,human,macaque,marmoset,mouse,orangutan,panda,pig,rat, antisense antisense A549@0.0292715,AG04450@0.038549,BJ@0.0208815,GM12878@2.25748,H1HESC@0.00453,HELAS3@0.0766785,HEPG2@0.01936,HMEC@0.006859,HSMM@0.0669725,HUVEC@0.0045365,K562@0.012199,MCF7@0.109797,NHEK@0.0100627,NHLF@0,SKNSHRA@0.296407, 0 0 0 0 ENSG00000237836.1 ENST00000439295.1 chrX:18910862-18912615 3 594 1155 exonic 0.84 0 0,1,0 0 0,0,0 139.791245791246 72.5774891774892 0 152.973063973064 65.6900432900433 0 173.469696969697 69.4285714285714 0 0 0 chimp,cow,dog,elephant,horse,human,macaque,marmoset,mouse,orangutan,panda,pig,rabbit,rat, antisense antisense A549@0.0292715,AG04450@0.038549,BJ@0.0208815,GM12878@2.25748,H1HESC@0.00453,HELAS3@0.0766785,HEPG2@0.01936,HMEC@0.006859,HSMM@0.0669725,HUVEC@0.0045365,K562@0.012199,MCF7@0.109797,NHEK@0.0100627,NHLF@0,SKNSHRA@0.296407, 0 0 0 0 ENSG00000246650.1 ENST00000500992.1 chrX:20005041-20009038 2 1662 2333 intergenic 0.09 0 0,1,0 1 0,0,0 0 0 0 9.18832731648616 8.29789969995714 20.527 9.04693140794224 9.47192456065152 21.503 0 0 human,macaque,orangutan,panda,rabbit, lincRNA lincRNA A549@0.143799,AG04450@0.093749,BJ@0.095734,GM12878@0.191174,H1HESC@0.126443,HELAS3@0.125207,HEPG2@0.0691175,HMEC@0.009843,HSMM@0.0280035,HUVEC@0.059209,K562@0.0960145,MCF7@0.078638,NHEK@0.0300637,NHLF@0.037928,SKNSHRA@0.224006, 0 0 0 0 ENSG00000225037.1 ENST00000424026.1 chrX:20158086-20158562 2 376 98 intronic 0 0 0,0,0 0 0,0,0 0 0 0 8.61702127659574 75.2040816326531 0 8.68085106382979 74.7551020408163 6.6 0 0 chimp,dog,elephant,human,macaque,marmoset,orangutan,rat, antisense antisense A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0.0073565, 0 0 0 0 ENSG00000231771.1 ENST00000449605.1 chrX:21911718-21920026 2 7617 689 intergenic 1.85 0 0,0,0 0 0,0,0 4.01627937508205 0 0 1.42851516345018 0 0 1.43691742155704 0 0 0 0 human,macaque,orangutan, lincRNA lincRNA A549@0.0950505,AG04450@0.0305225,BJ@0.0770585,GM12878@0.0949075,H1HESC@0.017618,HELAS3@0.060427,HEPG2@0.0417125,HMEC@0.002687,HSMM@0.0465055,HUVEC@0.0622245,K562@0.0405665,MCF7@0.008791,NHEK@0.0650667,NHLF@0.0083885,SKNSHRA@0.089734, 0 0 0 0 ENSG00000224204.1 ENST00000424650.1 chrX:22180850-22191100 5 1901 8341 intronic -1.01 0 0,0,0 0 0,0,0 0 29.6228269991608 0 1.25723303524461 35.2529672701115 0 0 34.5793070375255 0 0 0 chimp,human,macaque,marmoset,orangutan, antisense antisense A549@0,AG04450@0,BJ@0.007618,GM12878@0.0056325,H1HESC@0.027816,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000233067.1 ENST00000455399.1 chrX:22407432-23082236 4 714 674084 encompassing -2.64 0 0,1,0 0 0,0,0 26.1176470588235 9.62003103470784 0 17.781512605042 12.5563846642258 0 17.1806722689076 13.9067816473911 0 0 0 cat,cow,dog,human,macaque,marmoset,orangutan,panda,pig,rabbit, processed_transcript processed_transcript A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0.0244835,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000231846.1 ENST00000456621.1 chrX:22446249-22512830 3 386 66191 intergenic -2.86 1 0,0,1 0 0,0,0 63.4067357512953 5.0722303636446 100.839 160.152849740933 10.5174721638893 161.106 125.357512953368 21.4361922315723 154.814 0 0 cat,chimp,cow,dog,elephant,guinea_pig,horse,human,macaque,marmoset,mouse,opossum,orangutan,pig,rabbit, processed_transcript processed_transcript A549@0,AG04450@0,BJ@0,GM12878@0.015036,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000237019.1 ENST00000442155.1 chrX:22716574-22787083 2 380 70127 intergenic -11.44 0 0,1,0 0 0,0,0 0 5.35167624452779 0 0 6.72049282016912 2.39 0 6.74393600182526 2.43 0 0 chimp,horse,human,macaque,marmoset,orangutan,panda, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000249566.1 ENST00000508288.1 chrX:23093708-23096495 2 2457 328 intergenic -7.77 0 0,0,1 0 0,0,0 0 0 72.176 62.4021164021164 1.9359756097561 45.876 140.424094424094 121.487804878049 34.111 0 0 chimp,cow,dog,elephant,horse,human,marmoset,orangutan,panda,pig, lincRNA lincRNA A549@0.077034,AG04450@0.113612,BJ@0.0853295,GM12878@0.168603,H1HESC@0.0663465,HELAS3@0.0368145,HEPG2@0.033543,HMEC@0.006661,HSMM@0.063019,HUVEC@0.0112165,K562@0.0621035,MCF7@0.00825,NHEK@0.0925413,NHLF@0.001587,SKNSHRA@0.196821, 0 0 0 0 ENSG00000233785.1 ENST00000366134.2 chrX:23791109-23801073 3 669 9291 intergenic 0.40 0 0,1,0 1 0,0,0 0 0 136.598 0 1.79485523625013 180.619 0 1.81810354106124 211.59 0 0 chimp,human,macaque,marmoset,orangutan,pig, antisense antisense A549@1.57117,AG04450@0.02736,BJ@0,GM12878@0.195524,H1HESC@0.115175,HELAS3@1.39274,HEPG2@2.29304,HMEC@0.012186,HSMM@0,HUVEC@0,K562@0.134087,MCF7@0,NHEK@0.249282,NHLF@0.028842,SKNSHRA@0.0977395, 0 0 0 0 ENSG00000234230.1 ENST00000427551.1 chrX:24164342-24167771 3 414 3011 exonic -3.32 0 0,1,0 0 0,0,0 162.070048309179 136.901693789439 247.547 161.485507246377 113.904682829625 441.553 160.434782608696 105.05978080372 436.972 0 0 chimp,cow,dog,elephant,horse,human,macaque,marmoset,mouse,orangutan,pig,rabbit, antisense antisense A549@0,AG04450@0,BJ@0.0077605,GM12878@0.018255,H1HESC@0,HELAS3@0.0063645,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0.0071365,K562@0.0065365,MCF7@0.021759,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000236836.1 ENST00000432626.1 chrX:24668190-24676354 2 273 7889 intronic 0 0 0,0,0 0 0,0,0 16.0769230769231 21.2049689440994 0 0 19.9233109392825 0 0 21.6586386107238 0 0 0 chimp,dog,elephant,guinea_pig,horse,human,macaque,marmoset,mouse,orangutan,pig, antisense antisense A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000233403.1 ENST00000423914.1 chrX:25896456-25911661 4 546 14653 intergenic -1.99 1 0,0,0 0 0,0,0 21.043956043956 0.261379922200232 46.343 8.92490842490843 3.03453217771105 53.967 4.87912087912088 2.49177642803521 52.369 0 0 human, lincRNA lincRNA A549@0,AG04450@0,BJ@0.015305,GM12878@0.004262,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0.0132625,K562@0,MCF7@0.0186915,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000242021.1 ENST00000436019.1 chrX:27177022-27194415 5 589 16796 intergenic 5.63 0 0,0,0 0 0,0,0 0 0 0 0 0 0 0 0 0 0 0 chimp,human,macaque,orangutan,pig, lincRNA lincRNA A549@0.0050165,AG04450@0,BJ@0,GM12878@0.0033935,H1HESC@0,HELAS3@0.065489,HEPG2@0.087893,HMEC@0,HSMM@0,HUVEC@0.07795,K562@0,MCF7@0,NHEK@0.00504767,NHLF@0,SKNSHRA@0.16567, 0 0 0 0 ENSG00000228933.2 ENST00000422048.1 chrX:27193037-27417114 6 1873 222194 intergenic 4.09 0 0,1,0 0 0,0,0 0 2.65828510220798 0 0 4.37074358443522 0 0 4.58544335130562 0 0 0 chimp,dog,human,macaque,marmoset,orangutan,rat, processed_transcript processed_transcript A549@0.0021945,AG04450@0,BJ@0.001904,GM12878@0,H1HESC@0,HELAS3@0.273375,HEPG2@0.382466,HMEC@0,HSMM@0,HUVEC@0.216658,K562@0,MCF7@0,NHEK@0.0106523,NHLF@0,SKNSHRA@0.449175, 0 0 0 0 ENSG00000233793.2 ENST00000431122.1 chrX:27734198-27765239 2 374 30665 intergenic 0 0 0,0,0 0 0,0,1 0 5.77935757378118 0 59.7967914438503 8.52502853415946 3.528 59.0561497326203 14.9641937061797 3.54 0 0 chimp,cow,elephant,guinea_pig,horse,human,macaque,marmoset,orangutan,panda,pig,rabbit, processed_transcript processed_transcript A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0.109316,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0.0265005, 0 0 0 0 ENSG00000223742.1 ENST00000456037.1 chrX:28589649-28604512 3 753 14106 intergenic 3.87 0 0,0,1 0 0,0,0 0 43.0348787749894 356.528 0 62.2627959733447 337.854 0 60.1339146462498 310.481 0 0 human,macaque,marmoset,orangutan, lincRNA lincRNA A549@0.007307,AG04450@0.003115,BJ@0,GM12878@0,H1HESC@0.0185805,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0.005162,SKNSHRA@0, 0 0 0 0 ENSG00000237994.1 ENST00000424251.1 chrX:28960167-28960685 2 463 53 intronic -8.38 0 0,0,1 0 0,0,0 0 0 0 0 0 0 0 0 0 0 0 chimp,elephant,guinea_pig,horse,human,macaque,marmoset,orangutan,panda,pig, sense_intronic sense_intronic A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000229331.1 ENST00000441146.1 chrX:30689752-30690283 2 395 134 intronic -2.13 0 0,0,0 0 0,0,0 0 0 0 0 0 0 0 0 0 0 0 chimp,human,macaque,orangutan, sense_intronic sense_intronic A549@0,AG04450@0.004106,BJ@0.003395,GM12878@0.008822,H1HESC@0,HELAS3@0.039386,HEPG2@0.207603,HMEC@0,HSMM@0,HUVEC@0,K562@0.0036465,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000241886.1 ENST00000497961.1 chrX:30716324-30740049 2 560 23163 intronic -12.28 0 0,0,0 0 0,0,0 0 23.4467901394465 0 0 21.3262530760264 100.18 0 23.4407891896559 93.038 0 0 cat,elephant,guinea_pig,horse,human,macaque,orangutan,panda,pig,rabbit,rat, processed_transcript processed_transcript A549@0.0259,AG04450@0.173622,BJ@0.020111,GM12878@0.23981,H1HESC@0.01827,HELAS3@1.32987,HEPG2@6.78432,HMEC@0.002804,HSMM@0,HUVEC@0.002056,K562@0.180609,MCF7@0,NHEK@0.00110667,NHLF@0.026266,SKNSHRA@0.028805, 0 0 0 0 ENSG00000243055.1 ENST00000464659.1 chrX:30718115-30742291 2 649 23525 exonic -5.12 0 0,0,0 0 0,0,0 61.7796610169492 23.0859936238045 10.935 55.020030816641 20.998087141339 16.889 67.402157164869 23.0800850159405 20.367 0 0 chimp,dog,elephant,guinea_pig,horse,human,macaque,marmoset,mouse,orangutan,rabbit,rat, antisense antisense A549@0,AG04450@0.029719,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0.0100265,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000231542.1 ENST00000428263.1 chrX:30852740-30853417 2 243 432 intronic -6.11 0 0,0,0 0 0,1,0 0 0 51.838 0 0 64.17 0 0 54.592 1 1 chimp,human,macaque,marmoset,orangutan, antisense antisense A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0.0119585,HMEC@0,HSMM@0,HUVEC@0,K562@0.0195015,MCF7@0.0429645,NHEK@0.0104207,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000235512.1 ENST00000445240.1 chrX:30872438-30872824 2 290 94 exonic -7.77 0 0,0,0 0 0,0,0 743 743 170.147 787 787 167.59 714.144827586207 727.148936170213 154.879 0 0 cat,chimp,cow,dog,elephant,guinea_pig,horse,human,macaque,marmoset,mouse,opossum,panda,pig,rabbit,rat, antisense antisense A549@0.0074335,AG04450@0.0157415,BJ@0.0082875,GM12878@0.0080275,H1HESC@0,HELAS3@0.0400205,HEPG2@0.0223535,HMEC@0,HSMM@0.0078065,HUVEC@0,K562@0.0252335,MCF7@0.020812,NHEK@0.0490957,NHLF@0,SKNSHRA@0.0736905, 0 0 0 0 ENSG00000244186.1 ENST00000481143.1 chrX:31115794-31187673 2 619 71258 exonic 0 0 0,0,0 0 0,0,0 110.809369951535 30.4290605967049 0 129.977382875606 34.8993376182323 0 133.080775444265 34.24581099666 0 0 0 chimp,human,macaque,marmoset,mouse,orangutan, antisense antisense A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0.0037635,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000242286.1 ENST00000489449.1 chrX:31279225-31341747 2 653 61867 exonic 0.23 0 0,0,1 0 0,0,0 95.0367534456355 45.5588601354518 29.52 67.0245022970904 53.1768632712108 52.346 65.5635528330781 49.4596311442288 58.195 0 0 chimp,cow,dog,elephant,guinea_pig,horse,human,macaque,marmoset,mouse,orangutan,panda,pig,rabbit,rat, antisense antisense A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000236828.1 ENST00000439592.1 chrX:32773057-32774517 2 291 1167 intronic 0 0 0,1,0 0 0,0,0 0 11.892030848329 0 53.0481099656357 64.8586118251928 1.673 49.2061855670103 60.5492716366752 1.701 0 0 cat,chimp,cow,dog,elephant,guinea_pig,horse,human,macaque,marmoset,mouse,orangutan,panda,pig,rabbit,rat, antisense antisense A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000233928.1 ENST00000439992.1 chrX:33744625-33960397 3 492 215276 intergenic -0.90 1 0,0,0 0 0,0,0 0 2.63923056912986 32.968 41.0569105691057 4.70432375183486 53.633 38.9186991869919 4.53901967706572 53.576 0 0 cat,chimp,cow,dog,elephant,horse,human,macaque,marmoset,mouse,orangutan,panda,pig,rabbit,rat, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0.0285165,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0.004157,HUVEC@0,K562@0,MCF7@0.014188,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000233928.1 ENST00000445233.1 chrX:33760235-33960352 3 336 199777 intergenic -0.90 1 0,1,0 0 0,0,0 0 1.4693333066369 0 0 3.47372820695075 0 0 3.42375748960091 0 0 0 chimp,dog,horse,human,macaque,marmoset,orangutan,panda,rabbit, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0.0285165,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0.004157,HUVEC@0,K562@0,MCF7@0.014188,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000233571.1 ENST00000412652.1 chrX:34224842-34433654 3 523 208285 intergenic 0 0 0,0,0 0 0,0,0 0 5.60257339702811 0 0 7.21075449504285 0 0 7.48393307247281 0 0 0 human,macaque,orangutan, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0.107885,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0.0076445,NHEK@0,NHLF@0,SKNSHRA@0, 10 6 0 0 ENSG00000226484.1 ENST00000455438.1 chrX:36383741-36458375 8 4853 69767 exonic 6.34 0 0,0,0 0 0,0,0 0 1.05655969154471 0 2.06573253657531 3.63809537460404 7.452 4.30496600041212 6.37289836168963 9.463 0 0 chimp,human,orangutan, processed_transcript processed_transcript A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0.0029595,HEPG2@0,HMEC@0,HSMM@0.0004235,HUVEC@0,K562@0.0012785,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000234018.1 ENST00000449263.1 chrX:37765400-37808658 3 707 42547 intronic -8.80 0 0,0,0 1 0,0,0 35.4285714285714 1.59717488894634 0 44.2121640735502 3.11131219592451 14.185 43.6506364922206 10.8900510024209 14.006 0 0 cat,chimp,dog,elephant,guinea_pig,horse,human,macaque,marmoset,mouse,orangutan,panda,pig,rabbit,rat, processed_transcript ambiguous_orf A549@0.0697965,AG04450@0.055464,BJ@0.0265245,GM12878@0.0067665,H1HESC@0.03437,HELAS3@0,HEPG2@0,HMEC@0.035865,HSMM@0.0146395,HUVEC@0,K562@0,MCF7@2.14552,NHEK@0,NHLF@0.003833,SKNSHRA@0.0843365, 0 0 0 0 ENSG00000226679.1 ENST00000423919.1 chrX:38080644-38082920 2 653 1621 exonic -0.09 0 0,0,0 0 0,0,0 0 0 21.238 24.6156202143951 0.752621838371376 24.124 24.3430321592649 0.750154225786552 25.892 0 0 dog,elephant,horse,human,macaque,marmoset,orangutan,rat, antisense antisense A549@0.0177175,AG04450@0.0294855,BJ@0.0325215,GM12878@0,H1HESC@0.0440215,HELAS3@0,HEPG2@0,HMEC@0.01894,HSMM@0.014852,HUVEC@0.0061855,K562@0,MCF7@0,NHEK@0.0505837,NHLF@0.022809,SKNSHRA@0.129882, 0 0 0 0 ENSG00000235806.1 ENST00000432359.1 chrX:38629584-38658911 5 1175 28144 intergenic 2.30 0 0,0,0 0 0,0,0 43.3021276595745 4.3962833996589 23.868 61.8110638297872 3.08161597498579 77.853 73.3736170212766 2.80763217737351 79.65 0 0 chimp,dog,horse,human,macaque,marmoset,orangutan,rabbit, lincRNA lincRNA A549@0.0046815,AG04450@0,BJ@0.004173,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0.378331,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000238123.1 ENST00000436893.1 chrX:38660821-38663136 2 374 1939 exonic 0.23 0 0,1,1 1 0,0,0 0 0 94.466 22.2566844919786 6.89221248066013 113.749 23.5641711229947 8.92212480660134 106.187 0 0 cat,chimp,cow,dog,elephant,guinea_pig,horse,human,macaque,marmoset,orangutan,panda,pig,rabbit, antisense antisense A549@0.206636,AG04450@0.093416,BJ@0.0965455,GM12878@0.173325,H1HESC@0.117491,HELAS3@0.918052,HEPG2@0.361714,HMEC@0.08712,HSMM@0.152632,HUVEC@0.0129335,K562@0.16838,MCF7@0.103703,NHEK@0.0549863,NHLF@0.211797,SKNSHRA@0.249023, 0 0 0 0 ENSG00000224610.1 ENST00000438026.1 chrX:39085356-39159040 3 825 72855 intergenic 3.53 0 0,1,0 0 0,0,0 205.563636363636 38.586836867751 38.54 114.247272727273 34.9823073227644 43.657 111.157575757576 33.2103493239997 42.027 0 0 cat,chimp,cow,dog,elephant,guinea_pig,horse,human,macaque,marmoset,orangutan,panda,rabbit, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0.170035,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000235304.1 ENST00000448597.1 chrX:39164210-39186616 4 1769 20631 intergenic 3.97 0 0,0,0 0 0,0,0 0 63.0162377005477 0 0 52.3396830013087 12.625 0 49.3673597983617 12.805 0 0 chimp,human,macaque,marmoset,orangutan, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0.049292,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000235304.1 ENST00000429281.1 chrX:39164888-39186615 2 671 21054 intergenic 2.49 0 0,0,0 0 0,0,0 0 61.7501662391945 0 0 51.2881162724423 12.625 0 48.3755105918115 12.805 0 0 cat,chimp,cow,horse,human,macaque,marmoset,orangutan,pig,rabbit, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0.049292,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000236747.1 ENST00000431646.1 chrX:39226539-39251028 6 874 23605 intergenic -1.20 1 0,0,0 0 0,0,0 0 46.260156746452 0 34.9221967963387 39.0466002965473 0 33.9382151029748 35.0993857233637 0 0 0 chimp,human,macaque,marmoset,orangutan, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0.0051655, 0 0 0 0 ENSG00000234191.1 ENST00000438867.1 chrX:39260506-39294078 4 782 32784 intergenic -0.14 0 0,1,0 0 0,0,0 0 34.053074670571 0 0 31.1983284529039 0 0 28.9582723279649 0 0 0 cat,dog,horse,human,macaque,marmoset,orangutan,panda, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0.0078535,HUVEC@0,K562@0.019656,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000223486.1 ENST00000447651.1 chrX:39868529-39871435 2 2689 215 intergenic 2.31 0 0,1,1 0 0,0,0 100.703607288955 261.804651162791 143.777 95.8977314986984 252.390697674419 236.317 86.2194124209743 224.53488372093 219.126 0 0 dog,elephant,human,macaque,orangutan,pig, lincRNA processed_transcript A549@0,AG04450@0.0033315,BJ@0.004235,GM12878@0.003484,H1HESC@0.0514795,HELAS3@0.0069035,HEPG2@0.0301805,HMEC@0,HSMM@0.001694,HUVEC@0.040385,K562@0.00199,MCF7@0.001494,NHEK@0.00192767,NHLF@0.003601,SKNSHRA@0.382747, 0 0 0 0 ENSG00000236393.1 ENST00000452690.1 chrX:40122170-40146973 3 2997 21802 intergenic 2.98 0 0,1,0 1 0,0,0 0 28.8694156499404 0 10.8918918918919 18.2915328868911 6.375 11.5058391725058 18.1577378222181 6.475 0 0 chimp,guinea_pig,human,macaque,orangutan, lincRNA lincRNA A549@0.010426,AG04450@0.0434815,BJ@0.256148,GM12878@0.194993,H1HESC@0.001682,HELAS3@0.0021445,HEPG2@0.028404,HMEC@0,HSMM@1.08994,HUVEC@0.172239,K562@0.241901,MCF7@0,NHEK@0.00343133,NHLF@0.105091,SKNSHRA@0.0651135, 0 0 0 0 ENSG00000236393.1 ENST00000447570.1 chrX:40122219-40126475 2 705 3549 intergenic -0.87 0 0,1,1 1 0,0,0 27.0070921985816 3.90870667793745 0 46.5560283687943 7.45449422372499 6.375 52.9659574468085 3.31022823330516 6.475 0 0 cat,chimp,cow,dog,elephant,guinea_pig,horse,human,macaque,marmoset,orangutan,panda,pig, lincRNA lincRNA A549@0.010426,AG04450@0.0434815,BJ@0.256148,GM12878@0.194993,H1HESC@0.001682,HELAS3@0.0021445,HEPG2@0.028404,HMEC@0,HSMM@1.08994,HUVEC@0.172239,K562@0.241901,MCF7@0,NHEK@0.00343133,NHLF@0.105091,SKNSHRA@0.0651135, 0 0 0 0 ENSG00000234636.1 ENST00000456333.1 chrX:40594652-40597950 2 895 2401 exonic 14.62 1 1,1,1 0 0,0,0 4.58324022346369 3.92753019575177 116.468 34.5642458100559 5.50437317784256 99.081 32.0972067039106 5.41899208663057 108.509 0 0 chimp,human,macaque,orangutan, antisense antisense A549@0.209852,AG04450@0.268051,BJ@0.123668,GM12878@0.681289,H1HESC@0.501365,HELAS3@0.211665,HEPG2@0.190685,HMEC@0.068472,HSMM@0.329844,HUVEC@0.392045,K562@0.172551,MCF7@0.0820095,NHEK@0.08535,NHLF@0.282903,SKNSHRA@0.253329, 0 0 0 0 ENSG00000223714.1 ENST00000452501.1 chrX:41134992-41136031 2 833 204 intergenic -7.23 1 1,1,1 0 0,0,0 5.77070828331333 0 0 12.2797118847539 0 0 12.3613445378151 0 0 0 0 cat,chimp,horse,human,macaque,marmoset,orangutan,panda, lincRNA lincRNA A549@0.085308,AG04450@0,BJ@0.0057965,GM12878@0,H1HESC@0.0405305,HELAS3@0.049453,HEPG2@0.013067,HMEC@0.019615,HSMM@0.00546,HUVEC@0.025904,K562@0,MCF7@0.029002,NHEK@0,NHLF@0.0161755,SKNSHRA@0.027205, 0 0 0 0 ENSG00000233033.1 ENST00000451126.1 chrX:41379289-41381589 2 513 1785 exonic 0 0 0,1,0 0 0,0,0 506.25730994152 153.793277310924 755.52 509.473684210526 71.9081232492997 682.033 524.269005847953 79.6100840336134 738.751 0 0 cat,chimp,cow,dog,elephant,guinea_pig,horse,human,macaque,marmoset,mouse,opossum,orangutan,panda,pig,rabbit, antisense antisense A549@0.004215,AG04450@0,BJ@0,GM12878@0.0169315,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0.023843,NHEK@0.009915,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000233103.1 ENST00000437466.1 chrX:41907136-41914089 2 476 6475 intergenic -2.80 0 0,0,1 0 0,0,0 257.882352941176 23.051583011583 0 220.796218487395 11.6671814671815 0 213.949579831933 10.7207722007722 0 0 0 chimp,cow,dog,elephant,horse,human,macaque,marmoset,mouse,orangutan,panda,pig,rabbit,rat, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0.203205,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0.0043045,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000231772.1 ENST00000411879.1 chrX:42111712-42558542 8 887 445929 encompassing 3.92 0 0,0,1 0 0,0,0 0 10.7158269590002 0 0 11.3774614344436 0 0 11.214496029637 0 0 0 cat,chimp,cow,dog,elephant,guinea_pig,horse,human,macaque,marmoset,orangutan,pig,rabbit, processed_transcript processed_transcript A549@0,AG04450@0,BJ@0,GM12878@0.139312,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000231772.1 ENST00000440002.1 chrX:42315830-42558636 4 709 242091 intergenic -11.35 0 0,0,0 0 0,0,0 77.2214386459803 10.5634121053653 24.026 78.1156558533145 12.6653737644109 25.761 74.5331452750353 12.780508156024 25.901 0 0 cat,chimp,cow,dog,elephant,guinea_pig,horse,human,macaque,marmoset,orangutan,panda,pig,rabbit, processed_transcript processed_transcript A549@0,AG04450@0,BJ@0,GM12878@0.139312,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000224294.1 ENST00000440955.1 chrX:43036243-43085847 6 2222 47372 intergenic 3.77 0 0,1,0 0 0,0,0 0 1.13073123364012 0 0 2.76095583889217 0 0 2.74478594950604 0 0 0 chimp,human,macaque,orangutan, lincRNA lincRNA A549@0.172039,AG04450@0.014288,BJ@0.0021725,GM12878@0.058311,H1HESC@0.072956,HELAS3@0.0541465,HEPG2@0.154249,HMEC@0,HSMM@0.0038935,HUVEC@0.081876,K562@0.0024035,MCF7@0.081436,NHEK@0.000592667,NHLF@0.001732,SKNSHRA@0.0682095, 0 0 0 0 ENSG00000236276.1 ENST00000435093.1 chrX:43808978-43828866 5 732 19148 exonic 8.03 0 0,1,1 0 0,0,0 261.486338797814 50.5791205347817 281.582 231.245901639344 48.608314184249 155.808 215.491803278689 45.6855546271151 103.14 0 0 cat,chimp,cow,dog,elephant,guinea_pig,horse,human,macaque,marmoset,orangutan,panda,rabbit,rat, antisense antisense A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0.0026475,SKNSHRA@0, 0 0 0 0 ENSG00000229491.1 ENST00000438181.1 chrX:45042496-45192802 4 713 149587 intronic -3.34 0 0,0,0 0 0,0,0 0 4.86669964635964 0 0 5.11125966828668 0 0 6.10696116641152 0 0 0 chimp,dog,elephant,guinea_pig,horse,human,macaque,marmoset,mouse,orangutan,rat, antisense antisense A549@0,AG04450@0.0065695,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0.011342,HSMM@0.012093,HUVEC@0.025592,K562@0,MCF7@0,NHEK@0.075347,NHLF@0,SKNSHRA@0.0063285, 0 0 0 0 ENSG00000229491.1 ENST00000450527.1 chrX:45042496-45193162 4 718 149942 intronic -1.12 1 0,0,1 0 0,0,0 0 4.85517733523629 0 8.07103064066852 5.06051006389137 0 8.04456824512535 6.05398087260407 0 0 0 chimp,cow,dog,elephant,guinea_pig,horse,human,macaque,marmoset,mouse,orangutan,panda,pig,rabbit,rat, antisense antisense A549@0,AG04450@0.0065695,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0.011342,HSMM@0.012093,HUVEC@0.025592,K562@0,MCF7@0,NHEK@0.075347,NHLF@0,SKNSHRA@0.0063285, 0 0 0 0 ENSG00000229491.1 ENST00000450246.1 chrX:45179703-45184825 6 730 4382 intergenic 2.16 0 0,1,0 0 0,0,0 0 3.27247832040164 0 7.93835616438356 5.28457325422182 0 7.91232876712329 4.22158831583752 0 0 0 dog,elephant,guinea_pig,horse,human,macaque,marmoset,orangutan,panda, antisense antisense A549@0,AG04450@0.0065695,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0.011342,HSMM@0.012093,HUVEC@0.025592,K562@0,MCF7@0,NHEK@0.075347,NHLF@0,SKNSHRA@0.0063285, 0 0 0 0 ENSG00000229563.1 ENST00000435394.1 chrX:45364633-45382889 3 2211 16041 intergenic 2.30 1 0,1,0 0 0,0,0 0.448665762098598 25.8150988093012 13.392 5.4812302125735 25.5037092450595 1.434 5.53007688828584 25.374290879621 1.458 0 0 chimp,cow,dog,horse,human,macaque,orangutan,panda, lincRNA processed_transcript A549@0.0012475,AG04450@0.010564,BJ@0.015835,GM12878@0.003598,H1HESC@0.0075095,HELAS3@0.010381,HEPG2@0.0034265,HMEC@0.044386,HSMM@0.306045,HUVEC@0.012502,K562@0,MCF7@0.009163,NHEK@0.390207,NHLF@0.028828,SKNSHRA@0.0201095, 0 0 0 0 ENSG00000229563.1 ENST00000422047.1 chrX:45369729-45489447 5 634 119076 intergenic -3.54 0 0,1,0 0 0,0,0 33.0851735015773 9.08390439719171 0 54.4353312302839 8.13829822970204 0 53.0205047318612 7.72174913500621 1.88 0 0 cat,chimp,cow,dog,elephant,horse,human,macaque,marmoset,orangutan,pig,rabbit, lincRNA processed_transcript A549@0.0012475,AG04450@0.010564,BJ@0.015835,GM12878@0.003598,H1HESC@0.0075095,HELAS3@0.010381,HEPG2@0.0034265,HMEC@0.044386,HSMM@0.306045,HUVEC@0.012502,K562@0,MCF7@0.009163,NHEK@0.390207,NHLF@0.028828,SKNSHRA@0.0201095, 0 0 0 0 ENSG00000231566.1 ENST00000414772.1 chrX:45707328-45710447 2 1958 1159 intergenic 0.55 0 0,1,0 0 0,0,0 34.7727272727273 34.5556514236411 23.976 24.573544433095 5.86712683347714 61.214 21.1920326864147 7.32182916307161 56.045 0 0 chimp,cow,human,macaque,pig, lincRNA processed_transcript A549@0.736503,AG04450@0.14322,BJ@0.150404,GM12878@0.0369855,H1HESC@0.206972,HELAS3@0.292716,HEPG2@0.195275,HMEC@0.419585,HSMM@0.111815,HUVEC@0.095495,K562@0,MCF7@0.0476125,NHEK@0.507958,NHLF@0.128205,SKNSHRA@0.016863, 0 0 0 0 ENSG00000231566.1 ENST00000456532.1 chrX:45707509-45710920 3 372 3035 intergenic -7.62 0 1,1,1 1 0,0,0 116.034946236559 21.2602965403624 179.599 68.2365591397849 11.5746293245469 90.693 67.9220430107527 9.91927512355849 93.917 0 0 cat,chimp,cow,dog,human,macaque,marmoset,orangutan,panda, lincRNA processed_transcript A549@0.736503,AG04450@0.14322,BJ@0.150404,GM12878@0.0369855,H1HESC@0.206972,HELAS3@0.292716,HEPG2@0.195275,HMEC@0.419585,HSMM@0.111815,HUVEC@0.095495,K562@0,MCF7@0.0476125,NHEK@0.507958,NHLF@0.128205,SKNSHRA@0.016863, 0 0 0 0 ENSG00000234613.1 ENST00000420585.1 chrX:45772702-45776475 2 765 3006 intergenic 2.01 0 0,0,1 0 0,0,0 0 0 0 0 0.678642714570858 5.258 285.661437908497 0.689288090485695 5.346 0 0 cat,chimp,cow,dog,elephant,guinea_pig,horse,human,macaque,marmoset,mouse,opossum,orangutan,panda,pig,rabbit,rat, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000236751.1 ENST00000446884.1 chrX:46185359-46187080 2 624 1095 intergenic -7.44 0 1,1,1 0 0,0,0 27.5721153846154 10.4767123287671 330.066 14.8333333333333 0 261.382 15.1810897435897 0 216.273 0 0 chimp,dog,guinea_pig,horse,human,macaque,marmoset,orangutan,panda,pig,rat, lincRNA lincRNA A549@3.1337,AG04450@0,BJ@0,GM12878@0.0381775,H1HESC@0.145678,HELAS3@2.18403,HEPG2@3.54454,HMEC@0.425161,HSMM@0.461459,HUVEC@0.174503,K562@0,MCF7@0.129557,NHEK@1.19711,NHLF@0,SKNSHRA@0.312132, 0 0 0 0 ENSG00000230844.1 ENST00000421685.1 chrX:46404928-46407671 2 1904 837 intergenic 8.89 1 1,1,1 1 0,0,0 0 0 0 0 0 0 0 0 0 0 0 chimp,human,macaque,marmoset,orangutan, lincRNA processed_transcript A549@1.76574,AG04450@1.03251,BJ@0.996857,GM12878@2.88553,H1HESC@2.05324,HELAS3@6.00164,HEPG2@3.017,HMEC@0.731256,HSMM@1.8362,HUVEC@1.63441,K562@4.76572,MCF7@1.56642,NHEK@0.601445,NHLF@0.911196,SKNSHRA@1.34072, 0 0 0 0 ENSG00000203402.2 ENST00000366224.2 chrX:47157251-47158120 2 475 392 intergenic -4.13 0 0,0,0 0 0,0,0 0 0 0 0 0 0 0 0 0 0 0 NA lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0.012262,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 1 96 0 0 ENSG00000238068.1 ENST00000436124.1 chrX:47915699-47925971 2 394 9876 intronic -2.46 0 0,0,0 0 0,0,0 0 14.7853381936006 0 0 7.34113001215067 0 0 31.0566018631025 0 0 0 chimp,dog,human,macaque,marmoset,orangutan,pig,rabbit, antisense antisense A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0.00614,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000230100.1 ENST00000422410.1 chrX:48193110-48193874 2 268 494 intergenic 0 0 0,0,0 0 0,0,0 0 0 0 0 0 0 0 0 0 0 0 chimp,human,macaque,marmoset,orangutan,rabbit, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0.0197805,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 56 3 0 0 ENSG00000224292.1 ENST00000445586.1 chrX:48364911-48367226 2 651 1662 intergenic 4.15 1 1,1,1 1 0,0,0 0 0 167.097 0 1.15042117930205 142.604 6.94009216589862 0 110.406 0 0 chimp,cow,dog,horse,human,macaque,marmoset,orangutan,panda,rabbit, antisense antisense A549@0.103646,AG04450@0.033212,BJ@0.018658,GM12878@0.330785,H1HESC@0.02792,HELAS3@0.777118,HEPG2@0.148909,HMEC@0.068975,HSMM@0.0514355,HUVEC@0.0045575,K562@0.422537,MCF7@0.146987,NHEK@0.100773,NHLF@0.0208495,SKNSHRA@0.079053, 0 0 0 0 ENSG00000228343.1 ENST00000453810.1 chrX:48438162-48439545 2 448 933 intergenic -0.90 0 0,1,0 0 0,0,0 0 0 0 0 0 0 0 0 0 0 0 chimp,human,macaque,orangutan, antisense antisense A549@0.014989,AG04450@0.0149425,BJ@0.039644,GM12878@0,H1HESC@0,HELAS3@0.0152365,HEPG2@0,HMEC@0,HSMM@0.009145,HUVEC@0,K562@0,MCF7@0,NHEK@0.0115283,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000232828.1 ENST00000416061.1 chrX:48557354-48595570 3 922 37290 exonic 3.60 0 0,1,1 1 0,0,0 408.438177874187 12.6455886296594 0 382.430585683297 11.7396352909627 4.302 354.455531453362 14.6083400375436 4.374 0 0 cat,chimp,cow,dog,elephant,guinea_pig,horse,human,macaque,marmoset,mouse,opossum,orangutan,panda,rabbit,rat, antisense antisense A549@0.0166405,AG04450@0.02044,BJ@0.0135265,GM12878@0.013326,H1HESC@0.036439,HELAS3@0.202975,HEPG2@0.173782,HMEC@0,HSMM@0.0154825,HUVEC@0.029619,K562@0.023899,MCF7@0.015727,NHEK@0.00280733,NHLF@0.0041955,SKNSHRA@0.0777735, 0 0 0 0 ENSG00000237341.1 ENST00000433499.1 chrX:49055425-49058913 2 540 2946 exonic -9.80 1 0,0,1 0 0,0,0 55.8796296296296 46.0706042090971 57.816 95.012962962963 62.4514596062458 48.198 87.6333333333333 60.9310930074677 42.688 0 0 chimp,cow,dog,elephant,human,macaque,orangutan,panda,pig, antisense antisense A549@0.017541,AG04450@0.010924,BJ@0,GM12878@0.012369,H1HESC@0.0312205,HELAS3@0.0048965,HEPG2@0.026535,HMEC@0,HSMM@0,HUVEC@0.0128965,K562@0.0227315,MCF7@0.01509,NHEK@0.007227,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000234390.2 ENST00000545527.1 chrX:49641892-49643353 1 1461 0 intergenic 6.98 0 0,1,1 0 0,0,0 0 0 397.553 8.78165639972621 0 476.176 8.74401095140315 0 455.016 0 0 elephant,guinea_pig,horse,human,macaque,marmoset,orangutan,pig,rabbit, lincRNA processed_transcript A549@0.359339,AG04450@0.136026,BJ@0.322201,GM12878@0.131293,H1HESC@0.188881,HELAS3@0.312885,HEPG2@0.695429,HMEC@0.162441,HSMM@0.143352,HUVEC@0.097926,K562@0.278154,MCF7@0.172477,NHEK@0.124463,NHLF@0.185523,SKNSHRA@0.427313, 0 0 0 0 ENSG00000234390.2 ENST00000437322.1 chrX:49641892-49643844 2 1608 342 intergenic 6.98 0 1,1,1 0 0,0,0 55.7835820895522 253.538011695906 596.544 76.4490049751244 317.637426900585 534.798 73.7095771144279 305.087719298246 590.875 0 0 elephant,guinea_pig,horse,human,macaque,marmoset,orangutan,pig,rabbit, lincRNA processed_transcript A549@0.359339,AG04450@0.136026,BJ@0.322201,GM12878@0.131293,H1HESC@0.188881,HELAS3@0.312885,HEPG2@0.695429,HMEC@0.162441,HSMM@0.143352,HUVEC@0.097926,K562@0.278154,MCF7@0.172477,NHEK@0.124463,NHLF@0.185523,SKNSHRA@0.427313, 0 0 0 0 ENSG00000204466.5 ENST00000376025.2 chrX:50108408-50213737 28 7378 97897 intergenic 72.99 1 0,0,1 0 0,0,1 175.904852263486 7.53968967384087 52.939 206.646923285443 6.53567525051841 81.815 225.252778530767 7.07923634023514 78.208 0 0 cat,chimp,horse,human,macaque,marmoset,orangutan,panda,pig, lincRNA lincRNA A549@0,AG04450@0.000318,BJ@0,GM12878@0,H1HESC@2.34795,HELAS3@0.597784,HEPG2@2.86024,HMEC@0,HSMM@0,HUVEC@0.002375,K562@0,MCF7@0.0026185,NHEK@0.000862333,NHLF@0.0004985,SKNSHRA@0.049799, 0 0 0 0 ENSG00000204466.5 ENST00000546288.1 chrX:50111897-50213737 29 3886 97898 intergenic 107.28 0 0,0,1 0 0,0,1 212.060988162635 7.54341253141024 52.939 292.091610910962 6.54152280945474 81.815 338.027792074112 7.08494555557826 78.208 0 0 chimp,cow,dog,elephant,guinea_pig,horse,human,macaque,marmoset,mouse,orangutan,pig,rabbit, lincRNA lincRNA A549@0,AG04450@0.000318,BJ@0,GM12878@0,H1HESC@2.34795,HELAS3@0.597784,HEPG2@2.86024,HMEC@0,HSMM@0,HUVEC@0.002375,K562@0,MCF7@0.0026185,NHEK@0.000862333,NHLF@0.0004985,SKNSHRA@0.049799, 0 0 0 0 ENSG00000230317.1 ENST00000442994.1 chrX:50838690-50914232 9 721 74805 intergenic 8.34 0 0,0,0 0 0,0,0 0 0 0 0 0 0 0 0 0 0 0 chimp,human,macaque,marmoset,orangutan, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0.013559,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000229151.1 ENST00000425150.1 chrX:51099796-51139314 2 449 39067 intergenic 10.53 0 0,0,0 0 0,0,0 0 0 0 0 0.0952210305372821 6.11 0 0.0963728978421686 4.016 0 0 cat,chimp,dog,guinea_pig,horse,human,macaque,marmoset,orangutan,panda,rabbit, antisense antisense A549@0,AG04450@0,BJ@0,GM12878@0.0044695,H1HESC@0.013179,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0.00585467,NHLF@0,SKNSHRA@0.040706, 0 0 0 0 ENSG00000226530.1 ENST00000418775.1 chrX:51139363-51141382 2 584 1433 intergenic -4.36 0 0,1,0 0 0,0,0 0 0 0 4.09246575342466 4.20097697138869 3.72 0 4.66782972784369 3.765 0 0 chimp,human,macaque,marmoset,orangutan,panda, processed_transcript processed_transcript A549@0.027649,AG04450@0,BJ@0,GM12878@0.039384,H1HESC@0.062714,HELAS3@0,HEPG2@0,HMEC@0.006987,HSMM@0,HUVEC@0.00733,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0.229996, 0 0 0 0 ENSG00000226530.1 ENST00000455931.1 chrX:51139383-51208513 2 404 68724 encompassing -1.63 0 0,1,1 0 0,0,0 0 0.592078458762587 0 5.91584158415842 0.842907863337408 0.744 0 8.3009283510855 0.753 0 0 cat,chimp,dog,human,macaque,marmoset,orangutan, processed_transcript processed_transcript A549@0.027649,AG04450@0,BJ@0,GM12878@0.039384,H1HESC@0.062714,HELAS3@0,HEPG2@0,HMEC@0.006987,HSMM@0,HUVEC@0.00733,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0.229996, 0 0 0 0 ENSG00000234766.1 ENST00000448761.1 chrX:51244942-51253857 4 456 8453 intergenic 2.11 0 0,0,0 0 0,0,0 0 0 0 0 0 0 0 0 0 0 0 chimp,human,macaque,marmoset,orangutan, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000234019.1 ENST00000433646.1 chrX:53122892-53124040 2 613 533 intergenic -1.79 0 0,1,0 0 0,0,0 0 0 0 20.2120717781403 17.0431519699812 7.718 19.5742251223491 16.8799249530957 7.864 0 0 cat,chimp,cow,dog,elephant,guinea_pig,human,macaque,marmoset,mouse,orangutan,panda,pig,rabbit,rat, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0.009983,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000232593.1 ENST00000366185.2 chrX:53123339-53171889 3 1060 47486 intergenic 0 0 0,1,0 1 0,0,0 0 5.13010150360106 0 21.8179245283019 8.46756938887251 9.084 103.752830188679 13.573832287411 8.997 0 0 chimp,cow,dog,guinea_pig,human,macaque,marmoset,mouse,orangutan,pig,rat, lincRNA processed_transcript A549@0.837557,AG04450@0.497888,BJ@0.422986,GM12878@1.56039,H1HESC@1.82351,HELAS3@2.01687,HEPG2@1.54227,HMEC@0.694947,HSMM@0.401887,HUVEC@0.676239,K562@0.392175,MCF7@0.5213,NHEK@0.521707,NHLF@0.222728,SKNSHRA@1.14526, 0 0 0 0 ENSG00000235262.1 ENST00000412242.1 chrX:53241590-53243861 2 753 1516 intronic -10.30 0 0,1,0 0 0,0,0 7.73439575033201 0 137.975 0 0 122.286 0 0 136.34 0 0 chimp,cow,dog,guinea_pig,horse,human,macaque,marmoset,orangutan,panda,pig, sense_intronic sense_intronic A549@0.083396,AG04450@0.018363,BJ@0.0627585,GM12878@0.160433,H1HESC@0.031772,HELAS3@0.13997,HEPG2@0.0679885,HMEC@0,HSMM@0.0284545,HUVEC@0.0972295,K562@0.19947,MCF7@0.123046,NHEK@0.019966,NHLF@0.005714,SKNSHRA@0.172915, 0 0 0 0 ENSG00000233250.1 ENST00000418049.1 chrX:53459670-53459979 2 216 91 intronic -6.43 0 0,0,0 0 0,0,0 0 0 36.162 0 0 34.541 0 0 54.198 0 0 chimp,human,macaque,marmoset,orangutan,pig, antisense antisense A549@0,AG04450@0,BJ@0,GM12878@0.0218115,H1HESC@0.10543,HELAS3@0.051622,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0.0397395,K562@0.0422585,MCF7@0,NHEK@0,NHLF@0.0593255,SKNSHRA@0, 56 3 0 0 ENSG00000232765.2 ENST00000440645.1 chrX:55306576-55315219 5 452 8183 intergenic 7.78 0 0,0,1 0 0,0,0 0 0 0 0 0 0 0 0 0 0 0 cat,chimp,cow,dog,elephant,horse,human,macaque,marmoset,orangutan,panda,pig,rabbit, processed_transcript processed_transcript A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0.0238565,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000227486.1 ENST00000452532.1 chrX:55934556-56041606 2 1005 106043 intergenic 4.89 1 0,1,1 0 0,0,0 26.252736318408 0 0 82.6467661691542 0.604518921569552 0 79.8776119402985 9.51948737776185 0 0 0 chimp,human,macaque,marmoset,orangutan, processed_transcript processed_transcript A549@0.0188945,AG04450@0.024205,BJ@0.157088,GM12878@1.52227,H1HESC@0.319838,HELAS3@0.004145,HEPG2@0,HMEC@0.056926,HSMM@0.131927,HUVEC@0.118618,K562@0.002439,MCF7@0.0968735,NHEK@0.118587,NHLF@0.303115,SKNSHRA@0.228004, 0 0 0 0 ENSG00000230105.1 ENST00000446028.1 chrX:56644824-56650891 2 711 5354 intergenic -2.84 0 0,0,0 0 0,0,0 0 0 0 0 0 0 4.10126582278481 1.49775868509526 10.955 0 0 human,macaque,orangutan, lincRNA lincRNA A549@0.0060885,AG04450@0.003303,BJ@0,GM12878@0.012305,H1HESC@0.190955,HELAS3@0.0391175,HEPG2@0.011477,HMEC@0,HSMM@0,HUVEC@0.068626,K562@0,MCF7@0.12175,NHEK@0,NHLF@0,SKNSHRA@0.0127395, 0 0 0 0 ENSG00000204272.5 ENST00000437625.1 chrX:56755677-56843883 4 556 87644 intergenic 0.84 0 1,1,1 1 0,0,0 134.109712230216 0 19.631 216.512589928058 1.4130117292684 20.65 213.410071942446 5.10835881520697 20.15 0 0 cat,chimp,cow,dog,elephant,guinea_pig,horse,human,macaque,marmoset,mouse,orangutan,panda,rabbit,rat, lincRNA processed_transcript A549@25.6204,AG04450@17.7097,BJ@12.1551,GM12878@7.87481,H1HESC@17.326,HELAS3@12.9064,HEPG2@1.47548,HMEC@15.2835,HSMM@15.7135,HUVEC@12.4588,K562@0.400865,MCF7@11.82,NHEK@14.5437,NHLF@14.5774,SKNSHRA@21.6865, 0 0 0 0 ENSG00000204272.5 ENST00000374922.4 chrX:56755692-56844813 3 1526 87591 intergenic 0.84 1 1,1,1 1 0,0,0 45.9829619921363 0 24.026 225.823066841415 1.35855281935359 23.251 227.113368283093 5.05700357342649 22.706 0 0 cat,chimp,cow,dog,elephant,guinea_pig,horse,human,macaque,marmoset,mouse,orangutan,panda,pig,rabbit,rat, lincRNA processed_transcript A549@25.6204,AG04450@17.7097,BJ@12.1551,GM12878@7.87481,H1HESC@17.326,HELAS3@12.9064,HEPG2@1.47548,HMEC@15.2835,HSMM@15.7135,HUVEC@12.4588,K562@0.400865,MCF7@11.82,NHEK@14.5437,NHLF@14.5774,SKNSHRA@21.6865, 0 0 0 0 ENSG00000204272.5 ENST00000423617.1 chrX:56755789-56844059 2 539 87729 intergenic -3.70 0 1,1,1 1 0,0,0 101.551020408163 0 39.442 251.014842300557 1.56502410833362 34.608 249.669758812616 5.25644883675866 33.857 0 0 cat,chimp,dog,elephant,guinea_pig,horse,human,marmoset,mouse,orangutan,panda,rabbit,rat, lincRNA processed_transcript A549@25.6204,AG04450@17.7097,BJ@12.1551,GM12878@7.87481,H1HESC@17.326,HELAS3@12.9064,HEPG2@1.47548,HMEC@15.2835,HSMM@15.7135,HUVEC@12.4588,K562@0.400865,MCF7@11.82,NHEK@14.5437,NHLF@14.5774,SKNSHRA@21.6865, 0 0 0 0 ENSG00000204272.5 ENST00000451583.1 chrX:56755806-56843809 3 302 87697 intergenic -4.07 0 0,1,1 1 0,0,0 113.278145695364 0.170222470552014 44.729 208.629139072848 1.63093378336773 40.66 205.165562913907 5.31743389169527 39.79 0 0 cat,chimp,cow,dog,elephant,guinea_pig,horse,human,macaque,marmoset,mouse,orangutan,panda,rabbit,rat, lincRNA processed_transcript A549@25.6204,AG04450@17.7097,BJ@12.1551,GM12878@7.87481,H1HESC@17.326,HELAS3@12.9064,HEPG2@1.47548,HMEC@15.2835,HSMM@15.7135,HUVEC@12.4588,K562@0.400865,MCF7@11.82,NHEK@14.5437,NHLF@14.5774,SKNSHRA@21.6865, 0 0 0 0 ENSG00000224799.1 ENST00000430456.1 chrX:56999943-57001229 2 642 642 intergenic 0.81 0 0,0,0 0 0,0,0 0 0 0 0 0 0 0 0 0 0 0 human,macaque,marmoset,orangutan, antisense antisense A549@0,AG04450@0,BJ@0.0055555,GM12878@0,H1HESC@0.0046145,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000226310.1 ENST00000439622.1 chrX:57148095-57153676 2 663 4916 intergenic -1.95 0 0,1,0 1 0,0,0 0 0 0 0 0 38.229 0 0 32.39 0 0 chimp,human,macaque,marmoset,orangutan, antisense antisense A549@0.237257,AG04450@0.051137,BJ@0.160587,GM12878@0.386163,H1HESC@0.263196,HELAS3@0.431628,HEPG2@0.21374,HMEC@0.012315,HSMM@0.031609,HUVEC@0.057138,K562@0.478361,MCF7@0.226568,NHEK@0.0865897,NHLF@0.0145725,SKNSHRA@0.469996, 0 0 0 0 ENSG00000233661.1 ENST00000451979.1 chrX:62569525-62572057 2 424 2106 exonic -3.90 0 0,0,0 0 0,0,0 0 166.082621082621 0 0 173.394112060779 0 0 205.926400759734 0 0 0 chimp,human,macaque,marmoset,orangutan, antisense antisense A549@0,AG04450@0,BJ@0,GM12878@0.071491,H1HESC@0.0048695,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0.010901,MCF7@0.0048265,NHEK@0,NHLF@0,SKNSHRA@0.010652, 0 0 0 0 ENSG00000231729.1 ENST00000420917.1 chrX:62890076-62891382 2 392 912 intronic -0.18 0 0,0,0 0 0,0,0 0 0 0 0 0 0 0 2.39802631578947 0 0 0 cat,chimp,cow,dog,elephant,guinea_pig,horse,human,macaque,marmoset,orangutan,panda,pig, sense_intronic sense_intronic A549@0,AG04450@0.002725,BJ@0.0027185,GM12878@0,H1HESC@0.0260025,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0.0084555,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0.0109765, 0 0 0 0 ENSG00000231669.1 ENST00000439474.1 chrX:64808261-64809649 3 536 848 intergenic 6.63 0 0,1,0 1 0,0,0 0 0 0 27.5559701492537 6.83490566037736 24.441 58.3600746268657 8.1061320754717 23.126 0 0 cat,cow,dog,elephant,horse,human,macaque,marmoset,orangutan,panda,pig,rabbit, lincRNA processed_transcript A549@0.009786,AG04450@0.0712765,BJ@0.0896355,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0.011202,HMEC@0.06837,HSMM@0.046266,HUVEC@0,K562@1.29691,MCF7@0,NHEK@0.024915,NHLF@0.007582,SKNSHRA@0.04077, 0 0 0 0 ENSG00000231669.1 ENST00000429601.1 chrX:64808278-64820630 3 484 11864 intergenic 6.63 0 0,1,0 1 0,0,0 0 0.667565745111261 0 23.1095041322314 8.99688132164531 24.441 27.7086776859504 36.3892447741065 23.126 0 0 cat,cow,dog,elephant,horse,human,macaque,marmoset,orangutan,panda,rabbit, lincRNA processed_transcript A549@0.009786,AG04450@0.0712765,BJ@0.0896355,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0.011202,HMEC@0.06837,HSMM@0.046266,HUVEC@0,K562@1.29691,MCF7@0,NHEK@0.024915,NHLF@0.007582,SKNSHRA@0.04077, 0 0 0 0 ENSG00000231669.1 ENST00000447323.1 chrX:64808284-64813305 2 380 4639 intergenic 6.63 1 1,1,1 1 0,0,0 0 0 0 53.8789473684211 9.79801681396853 24.441 61.2236842105263 79.784651864626 23.126 0 0 cat,dog,elephant,horse,human,macaque,orangutan,rabbit, lincRNA processed_transcript A549@0.009786,AG04450@0.0712765,BJ@0.0896355,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0.011202,HMEC@0.06837,HSMM@0.046266,HUVEC@0,K562@1.29691,MCF7@0,NHEK@0.024915,NHLF@0.007582,SKNSHRA@0.04077, 0 0 0 0 ENSG00000237311.1 ENST00000424241.1 chrX:65219593-65220913 2 855 463 intergenic -7.73 0 0,1,0 0 0,0,0 0 0 0 3.35438596491228 0 1.38 3.41052631578947 0 1.458 0 0 chimp,cow,elephant,guinea_pig,horse,human,macaque,marmoset,orangutan,rabbit, antisense antisense A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@10.8971,MCF7@0,NHEK@0.00595833,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000256910.1 ENST00000538676.1 chrX:65235303-65240264 3 1812 3145 intergenic 1.09 0 1,1,1 0 0,0,0 14.067880794702 0 49.868 28.5546357615894 0.786009538950715 47.157 36.8647902869757 0.786009538950715 47.575 0 0 cat,chimp,horse,human,macaque,marmoset,mouse,orangutan,panda,pig,rabbit,rat, lincRNA lincRNA A549@0,AG04450@0.001326,BJ@0,GM12878@0.228673,H1HESC@0.001722,HELAS3@0.126635,HEPG2@0.017097,HMEC@0.002423,HSMM@0.003915,HUVEC@0.169505,K562@82.3011,MCF7@0,NHEK@0.00346867,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000256910.1 ENST00000540516.1 chrX:65235303-65240264 2 1688 3271 intergenic 1.09 0 1,1,1 0 0,0,0 15.1013033175355 0 49.868 30.6522511848341 0.755732191990217 47.157 39.5728672985782 0.755732191990217 47.575 0 0 cat,chimp,cow,horse,human,macaque,marmoset,mouse,orangutan,panda,pig,rabbit,rat, lincRNA lincRNA A549@0,AG04450@0.001326,BJ@0,GM12878@0.228673,H1HESC@0.001722,HELAS3@0.126635,HEPG2@0.017097,HMEC@0.002423,HSMM@0.003915,HUVEC@0.169505,K562@82.3011,MCF7@0,NHEK@0.00346867,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000215162.1 ENST00000399711.1 chrX:68399400-68429767 5 2168 28191 intergenic 3.27 0 0,0,0 0 0,0,0 15.789667896679 9.50239438118548 36.566 9.5710332103321 13.3895924231138 49.044 9.33579335793358 12.5699336667731 47.695 0 0 chimp,human,macaque,marmoset,orangutan, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0.005213,HELAS3@0,HEPG2@0.005393,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0.015401, 0 0 0 0 ENSG00000228160.1 ENST00000454131.1 chrX:68789512-68790200 2 453 233 intergenic -1.05 0 0,0,1 0 0,0,0 0 0 0 0 0 3.962 0 0 4.046 0 0 chimp,cow,horse,human,macaque,marmoset,orangutan,panda,rabbit, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@1.68019,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0.0199635, 0 0 0 0 ENSG00000220925.2 ENST00000403371.2 chrX:69368432-69369504 2 511 559 exonic 3.95 0 0,0,0 0 0,0,0 45.7671232876712 0 49.27 60.4383561643836 0 48.621 67.9745596868885 0 60.901 0 0 chimp,dog,elephant,horse,human,macaque,marmoset,orangutan,panda,pig,rabbit, antisense antisense A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0.013291, 0 0 0 0 ENSG00000203588.3 ENST00000366397.3 chrX:69383692-69385056 2 540 822 intronic -4.76 0 0,0,0 0 0,0,0 0 0 40.698 0 0 31.739 0 0 38.818 0 0 chimp,human,macaque,marmoset,orangutan, antisense antisense A549@0.0114545,AG04450@0,BJ@0,GM12878@0,H1HESC@0.005483,HELAS3@0.0077015,HEPG2@0.010811,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0.004186, 1 96 0 0 ENSG00000231651.1 ENST00000424211.1 chrX:69672808-69675676 2 430 2436 intronic 0.81 0 0,0,1 0 0,0,0 0 101.515599343186 69.74 4.89302325581395 162.021346469622 53.691 5.17209302325581 161.532840722496 51.174 0 0 cat,chimp,cow,dog,elephant,human,macaque,marmoset,panda,pig, antisense antisense A549@0,AG04450@0.0149895,BJ@0,GM12878@0.204292,H1HESC@0.0062645,HELAS3@0.119138,HEPG2@0.0345285,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0.075149,NHEK@0.0165487,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000231651.1 ENST00000431103.1 chrX:69672812-69675844 2 393 2637 intronic 0.81 0 1,1,1 0 0,0,0 0 93.7777777777778 80.52 6.69211195928753 151.579067121729 56.462 6.74300254452926 151.06105422829 50.398 0 0 cat,chimp,cow,dog,elephant,human,macaque,marmoset,panda,pig, antisense antisense A549@0,AG04450@0.0149895,BJ@0,GM12878@0.204292,H1HESC@0.0062645,HELAS3@0.119138,HEPG2@0.0345285,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0.075149,NHEK@0.0165487,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000228427.1 ENST00000450860.1 chrX:70403409-70418025 2 724 13890 intergenic 0.33 0 0,1,0 1 0,0,0 87.585635359116 8.22419006479482 22.54 40.5814917127072 1.96076313894888 0 40.25 1.93167746580274 0 0 0 chimp,guinea_pig,human,macaque,marmoset,orangutan, antisense antisense A549@0,AG04450@0,BJ@0.0067825,GM12878@4.63528,H1HESC@0,HELAS3@0.0172485,HEPG2@0.110128,HMEC@0,HSMM@0.154605,HUVEC@0,K562@0.275575,MCF7@0.009666,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000237265.1 ENST00000422194.1 chrX:70882845-70885603 6 691 2057 intergenic 7.70 0 0,0,1 0 0,0,0 0 0 0 3.9218523878437 1.04569761789013 0 0 1.06319883325231 0 0 0 cat,chimp,cow,dog,horse,human,macaque,marmoset,orangutan,pig,rabbit,rat, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0.074241,H1HESC@0,HELAS3@0.0145075,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0.017234,MCF7@0,NHEK@0.121309,NHLF@0,SKNSHRA@0.010118, 0 0 0 0 ENSG00000237265.1 ENST00000433410.1 chrX:70882848-70884121 3 620 649 intergenic -9.54 0 0,0,1 0 0,0,0 0 0 0 4.37096774193548 3.31432973805855 0 0 3.36979969183359 0 0 0 chimp,cow,dog,elephant,horse,human,macaque,marmoset,orangutan, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0.074241,H1HESC@0,HELAS3@0.0145075,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0.017234,MCF7@0,NHEK@0.121309,NHLF@0,SKNSHRA@0.010118, 47 3 27 3 ENSG00000248499.1 ENST00000508574.1 chrX:70917046-70926305 3 4110 5145 intergenic 0.96 0 0,0,0 0 0,0,0 0 0 0 0 0 0 0 0 0 0 1 chimp,human,macaque, lincRNA lincRNA A549@0.0092555,AG04450@0.0235625,BJ@0.007605,GM12878@0.0630595,H1HESC@0.40593,HELAS3@0,HEPG2@0.0014245,HMEC@0.04679,HSMM@0.196061,HUVEC@0.0245415,K562@0.716712,MCF7@0.0009775,NHEK@0,NHLF@0.058625,SKNSHRA@0.0044415, 0 0 0 0 ENSG00000215115.5 ENST00000452468.1 chrX:70934221-70936237 5 527 1481 intergenic 5.85 0 0,0,0 0 0,0,1 0 0 0 0 0 0 0 0 0 0 0 cat,chimp,cow,dog,elephant,guinea_pig,horse,human,macaque,marmoset,orangutan,pig,rat, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0.0064875,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0.0020215,HUVEC@0.0050195,K562@0,MCF7@0,NHEK@0.009598,NHLF@0.010485,SKNSHRA@0.0160835, 47 3 27 3 ENSG00000215115.5 ENST00000535490.1 chrX:70934224-70938135 6 1845 2056 intergenic 81.80 0 0,0,0 0 0,0,1 0 0 0 0 0 0 0 0 0 0 0 chimp,cow,guinea_pig,human,macaque,marmoset,orangutan,pig,rabbit,rat, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0.0064875,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0.0020215,HUVEC@0.0050195,K562@0,MCF7@0,NHEK@0.009598,NHLF@0.010485,SKNSHRA@0.0160835, 79 2 44 2 ENSG00000238106.1 ENST00000457716.1 chrX:70939766-70940650 3 217 663 intergenic 0 0 0,0,0 0 0,0,0 0 0 0 1.14285714285714 2.24434389140271 0 1.15668202764977 2.27149321266968 0 0 0 chimp,dog,human,macaque,marmoset,orangutan, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0.033743,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0.0527705,MCF7@0,NHEK@0.167677,NHLF@0.981578,SKNSHRA@0.0760885, 0 0 0 0 ENSG00000231774.1 ENST00000439926.1 chrX:70980625-70981509 3 217 663 intergenic 0 0 0,0,0 0 0,0,0 0 0 0 0 0 0 0 0 0 0 0 chimp,dog,human,macaque,marmoset,orangutan, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0.036652,H1HESC@0.0674865,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0.0527705,MCF7@0,NHEK@0.167677,NHLF@1.04774,SKNSHRA@0.0760885, 0 0 0 0 ENSG00000215113.5 ENST00000542739.1 chrX:70983140-70987051 6 1845 2056 intergenic 81.80 0 0,0,0 0 0,0,0 0 0 0 0 2.49027237354086 0 1.20542005420054 5.34970817120623 0 0 0 chimp,cow,guinea_pig,human,macaque,marmoset,orangutan,pig,rabbit,rat, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0.0064875,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0.0020215,HUVEC@0.0050195,K562@0,MCF7@0,NHEK@0.00239967,NHLF@0.010485,SKNSHRA@0.0160835, 79 2 44 2 ENSG00000215113.5 ENST00000440412.1 chrX:70985038-70987054 5 527 1481 intergenic 5.85 0 0,0,0 0 0,0,0 0 0 0 0 3.45712356515868 0 4.22011385199241 7.42673869007427 0 0 0 cat,chimp,cow,dog,elephant,guinea_pig,horse,human,macaque,marmoset,orangutan,pig,rat, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0.0064875,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0.0020215,HUVEC@0.0050195,K562@0,MCF7@0,NHEK@0.00239967,NHLF@0.010485,SKNSHRA@0.0160835, 47 3 27 3 ENSG00000248135.1 ENST00000515698.1 chrX:70994970-71004228 3 4110 5144 intergenic 0.96 0 0,0,0 0 0,0,0 0 0 0 0 0 0 32.4138686131387 0 0 0 1 chimp,human,macaque, lincRNA lincRNA A549@0.0092555,AG04450@0.0235625,BJ@0.007605,GM12878@0.0630595,H1HESC@0.40316,HELAS3@0,HEPG2@0.0014245,HMEC@0.04679,HSMM@0.196061,HUVEC@0.0245415,K562@0.716147,MCF7@0.0009775,NHEK@0,NHLF@0.058625,SKNSHRA@0.0044415, 0 0 0 0 ENSG00000231944.1 ENST00000420998.1 chrX:71908800-71932190 5 593 22789 intronic 2.31 0 0,0,0 0 0,0,0 0 9.59686690947387 0 0 13.0613892667515 0 0 11.8889376453552 0 0 0 cat,chimp,cow,dog,elephant,guinea_pig,horse,human,macaque,marmoset,mouse,orangutan,pig,rabbit, antisense antisense A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0.00426933,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000229583.1 ENST00000413458.1 chrX:72001689-72002454 3 432 329 intronic 5.08 1 0,0,1 0 0,0,0 0 0 0 0 0 0 0 0 0 0 0 cat,chimp,cow,dog,guinea_pig,horse,human,macaque,marmoset,mouse,orangutan,panda,pig,rabbit,rat, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000229583.1 ENST00000445437.1 chrX:72001689-72002484 3 450 341 intronic 6.53 1 0,0,1 0 0,0,0 0 0 0 0 0 0 0 0 0 0 0 chimp,cow,dog,guinea_pig,horse,human,macaque,marmoset,mouse,orangutan,panda,pig,rabbit,rat, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 167 2 109 2 ENSG00000225396.1 ENST00000419795.1 chrX:72027259-72028014 3 430 321 intronic 2.91 0 0,0,0 0 0,0,0 0 0 0 0 0 4.416 0 0 4.448 0 0 chimp,cow,dog,guinea_pig,horse,human,macaque,marmoset,mouse,orangutan,panda,pig,rabbit,rat, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000225396.1 ENST00000458170.1 chrX:72027259-72028044 3 448 333 intronic 4.36 0 0,0,0 0 0,0,0 0 0 0 0 0 4.416 0 0 4.448 0 0 cat,chimp,cow,horse,human,macaque,marmoset,mouse,orangutan,panda,pig,rabbit,rat, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 167 2 109 2 ENSG00000226725.1 ENST00000416989.1 chrX:72218440-72222695 4 950 3299 intergenic -0.87 0 0,0,0 0 0,0,0 0 0 151.259 16.7747368421053 1.91330706274629 283.222 16.1347368421053 1.88420733555623 305.29 0 0 cow,dog,guinea_pig,human,macaque,marmoset,orangutan,pig, antisense antisense A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0.092698,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0.125629,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000231963.1 ENST00000454388.1 chrX:72300006-72304474 4 1163 3299 intergenic -0.87 1 0,0,0 0 0,0,0 0 0 142.562 16.5434221840069 0 265.542 15.938950988822 0 304.853 0 0 dog,guinea_pig,human,macaque,marmoset,orangutan,pig, antisense antisense A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0.094001,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0.137545,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000229807.3 ENST00000434839.1 chrX:73040486-73046290 2 718 5084 intergenic 3.87 0 1,1,1 0 0,0,0 17.3467966573816 11.02871754524 0 23.2242339832869 14.3629032258065 1.195 23.1908077994429 14.2976003147128 1.215 0 0 cat,chimp,cow,dog,elephant,guinea_pig,horse,human,macaque,marmoset,mouse,orangutan,panda,pig,rabbit, lincRNA processed_transcript A549@0.0296815,AG04450@0.100315,BJ@0.0264,GM12878@165.755,H1HESC@0.0467465,HELAS3@2.96203,HEPG2@0.329641,HMEC@10.748,HSMM@0.0054505,HUVEC@0.228442,K562@43.4334,MCF7@0.096312,NHEK@40.3065,NHLF@8.37588,SKNSHRA@87.7697, 0 0 0 0 ENSG00000229807.3 ENST00000421322.1 chrX:73040488-73046641 2 444 5707 intergenic -0.99 1 1,1,1 0 0,0,0 28.0518018018018 9.82477659015244 0 10.1126126126126 14.9300858594708 2.51 10.0630630630631 14.8715612405817 4.392 0 0 cat,chimp,cow,dog,elephant,guinea_pig,horse,human,macaque,marmoset,mouse,orangutan,panda,pig,rabbit, lincRNA processed_transcript A549@0.0296815,AG04450@0.100315,BJ@0.0264,GM12878@165.755,H1HESC@0.0467465,HELAS3@2.96203,HEPG2@0.329641,HMEC@10.748,HSMM@0.0054505,HUVEC@0.228442,K562@43.4334,MCF7@0.096312,NHEK@40.3065,NHLF@8.37588,SKNSHRA@87.7697, 0 0 0 0 ENSG00000229807.3 ENST00000417942.1 chrX:73040491-73046136 3 721 4920 intergenic -0.85 1 1,1,1 0 0,0,0 17.2746185852982 11.3963414634146 0 23.127600554785 14.8416666666667 1.195 23.0943134535368 14.7741869918699 1.215 0 0 chimp,cow,dog,elephant,guinea_pig,horse,human,macaque,marmoset,mouse,orangutan,panda,pig,rabbit, lincRNA processed_transcript A549@0.0296815,AG04450@0.100315,BJ@0.0264,GM12878@165.755,H1HESC@0.0467465,HELAS3@2.96203,HEPG2@0.329641,HMEC@10.748,HSMM@0.0054505,HUVEC@0.228442,K562@43.4334,MCF7@0.096312,NHEK@40.3065,NHLF@8.37588,SKNSHRA@87.7697, 0 0 0 0 ENSG00000229807.3 ENST00000416330.1 chrX:73040491-73046179 3 747 4937 intergenic 2.34 1 1,1,1 0 0,0,0 16.673360107095 11.3570994531092 0 22.3226238286479 14.7905610694754 1.195 22.2904953145917 14.7233137532915 1.215 0 0 cat,chimp,cow,dog,elephant,guinea_pig,horse,human,macaque,marmoset,orangutan,panda,pig,rabbit, lincRNA processed_transcript A549@0.0296815,AG04450@0.100315,BJ@0.0264,GM12878@165.755,H1HESC@0.0467465,HELAS3@2.96203,HEPG2@0.329641,HMEC@10.748,HSMM@0.0054505,HUVEC@0.228442,K562@43.4334,MCF7@0.096312,NHEK@40.3065,NHLF@8.37588,SKNSHRA@87.7697, 0 0 0 0 ENSG00000229807.3 ENST00000429829.1 chrX:73040491-73072588 6 19269 12818 intergenic 2.92 1 0,1,1 1 0,0,0 14.8187243759406 1.26096114838508 0 15.9782033317764 1.68333593384303 0 15.7690072136592 2.15111561866126 0 0 0 human,macaque, lincRNA processed_transcript A549@0.0296815,AG04450@0.100315,BJ@0.0264,GM12878@165.755,H1HESC@0.0467465,HELAS3@2.96203,HEPG2@0.329641,HMEC@10.748,HSMM@0.0054505,HUVEC@0.228442,K562@43.4334,MCF7@0.096312,NHEK@40.3065,NHLF@8.37588,SKNSHRA@87.7697, 0 0 0 0 ENSG00000229807.3 ENST00000540864.1 chrX:73046289-73047729 1 1440 0 intergenic -3.85 0 0,0,1 0 0,0,0 0 0 0 1.74305555555556 0 0 3.05 0 0 0 0 cat,chimp,dog,elephant,guinea_pig,horse,human,macaque,marmoset,orangutan,panda,rabbit, lincRNA processed_transcript A549@0.0296815,AG04450@0.100315,BJ@0.0264,GM12878@165.755,H1HESC@0.0467465,HELAS3@2.96203,HEPG2@0.329641,HMEC@10.748,HSMM@0.0054505,HUVEC@0.228442,K562@43.4334,MCF7@0.096312,NHEK@40.3065,NHLF@8.37588,SKNSHRA@87.7697, 0 0 0 0 ENSG00000229807.3 ENST00000433732.1 chrX:73047544-73049302 2 674 1082 intergenic -13.35 0 0,0,0 0 0,0,0 0 0 0 1.22848664688427 2.04066543438078 0 1.23738872403561 2.05545286506469 0 0 0 cat,chimp,cow,dog,elephant,guinea_pig,horse,human,macaque,marmoset,mouse,orangutan,panda,pig,rabbit,rat, lincRNA processed_transcript A549@0.0296815,AG04450@0.100315,BJ@0.0264,GM12878@165.755,H1HESC@0.0467465,HELAS3@2.96203,HEPG2@0.329641,HMEC@10.748,HSMM@0.0054505,HUVEC@0.228442,K562@43.4334,MCF7@0.096312,NHEK@40.3065,NHLF@8.37588,SKNSHRA@87.7697, 0 0 0 0 ENSG00000229807.3 ENST00000445814.1 chrX:73047636-73051045 3 434 2971 intergenic -4.72 0 0,1,0 0 0,0,0 64.8663594470046 0 39.168 87.6774193548387 1.81319421070347 28.764 84.4976958525346 1.81857960282733 27.693 0 0 chimp,cow,dog,elephant,guinea_pig,horse,human,macaque,marmoset,mouse,orangutan,panda,pig,rabbit, lincRNA processed_transcript A549@0.0296815,AG04450@0.100315,BJ@0.0264,GM12878@165.755,H1HESC@0.0467465,HELAS3@2.96203,HEPG2@0.329641,HMEC@10.748,HSMM@0.0054505,HUVEC@0.228442,K562@43.4334,MCF7@0.096312,NHEK@40.3065,NHLF@8.37588,SKNSHRA@87.7697, 0 0 0 0 ENSG00000225470.1 ENST00000414209.1 chrX:73164177-73220326 5 2189 53952 intergenic 2.61 0 1,1,1 1 0,0,0 0 0.75974940688019 0 0.982640475102787 0.717081850533808 0 0.96619460941069 3.85018164294187 0 0 0 chimp,human,macaque,marmoset,orangutan, lincRNA non_coding A549@2.30154,AG04450@1.426,BJ@1.26897,GM12878@2.94163,H1HESC@2.8557,HELAS3@3.49233,HEPG2@1.55187,HMEC@1.69794,HSMM@0.762231,HUVEC@2.51751,K562@2.59652,MCF7@2.30352,NHEK@2.0765,NHLF@1.70986,SKNSHRA@3.03274, 0 0 0 0 ENSG00000225470.1 ENST00000453317.1 chrX:73164181-73164781 2 481 117 intergenic -1.96 0 1,1,1 1 0,0,0 0 0 0 4.47193347193347 0 0 4.3970893970894 0 0 0 0 cat,chimp,cow,dog,elephant,guinea_pig,horse,human,macaque,marmoset,orangutan,panda,pig,rabbit, lincRNA lincRNA A549@2.30154,AG04450@1.426,BJ@1.26897,GM12878@2.94163,H1HESC@2.8557,HELAS3@3.49233,HEPG2@1.55187,HMEC@1.69794,HSMM@0.762231,HUVEC@2.51751,K562@2.59652,MCF7@2.30352,NHEK@2.0765,NHLF@1.70986,SKNSHRA@3.03274, 0 0 0 0 ENSG00000225470.1 ENST00000415215.1 chrX:73164202-73167265 4 471 2586 intergenic -1.17 0 1,1,1 1 0,0,0 0 0 0 0 1.91802010827533 2.151 0 62.3341067285383 2.115 0 0 chimp,human,macaque,marmoset,orangutan, lincRNA lincRNA A549@2.30154,AG04450@1.426,BJ@1.26897,GM12878@2.94163,H1HESC@2.8557,HELAS3@3.49233,HEPG2@1.55187,HMEC@1.69794,HSMM@0.762231,HUVEC@2.51751,K562@2.59652,MCF7@2.30352,NHEK@2.0765,NHLF@1.70986,SKNSHRA@3.03274, 0 0 0 0 ENSG00000228906.1 ENST00000444482.1 chrX:73168808-73169393 2 449 134 intergenic -5.66 0 0,0,0 0 0,0,0 0 0 0 0 0 0 0 0 0 0 0 chimp,human,macaque,orangutan, lincRNA lincRNA A549@0.114233,AG04450@0.0672385,BJ@0.209734,GM12878@0.493107,H1HESC@0.284969,HELAS3@0.565783,HEPG2@0.616846,HMEC@0.019906,HSMM@0.0981335,HUVEC@0.363394,K562@0.390189,MCF7@0.0512905,NHEK@0.220195,NHLF@0.049125,SKNSHRA@0.714247, 0 0 0 0 ENSG00000230590.1 ENST00000430772.1 chrX:73467699-73513362 6 702 44951 intergenic 5.85 0 0,1,0 1 0,0,0 15.9487179487179 5.02380369735935 0 61.1339031339031 3.497608507041 2.63 61.5584045584046 3.70581299637383 2.65 0 0 cat,chimp,dog,elephant,horse,human,macaque,marmoset,orangutan,pig,rabbit, lincRNA non_coding A549@10.2364,AG04450@8.05504,BJ@5.87744,GM12878@6.99655,H1HESC@10.0282,HELAS3@12.8027,HEPG2@9.74217,HMEC@1.07543,HSMM@1.71969,HUVEC@14.5081,K562@4.87228,MCF7@3.87708,NHEK@4.50386,NHLF@2.30182,SKNSHRA@11.8431, 0 0 0 0 ENSG00000230590.1 ENST00000429124.1 chrX:73498209-73512435 4 2593 11627 intergenic -4.51 0 1,1,1 1 0,0,0 0 17.8978240302744 29.234 15.6413420748168 11.558355551733 12.689 15.7601234091786 11.8806226885697 12.765 0 0 chimp,human,macaque,orangutan, lincRNA processed_transcript A549@10.2364,AG04450@8.05504,BJ@5.87744,GM12878@6.99655,H1HESC@10.0282,HELAS3@12.8027,HEPG2@9.74217,HMEC@1.07543,HSMM@1.71969,HUVEC@14.5081,K562@4.87228,MCF7@3.87708,NHEK@4.50386,NHLF@2.30182,SKNSHRA@11.8431, 0 0 0 0 ENSG00000230590.1 ENST00000418855.1 chrX:73500236-73512186 4 575 11369 intergenic -4.51 0 0,1,1 1 0,0,0 0 18.3039845193069 18.038 74.5547826086957 11.4273902717917 6.351 74.944347826087 11.7629518867095 6.407 0 0 cat,cow,dog,horse,human,macaque,marmoset,orangutan,panda,pig, lincRNA processed_transcript A549@10.2364,AG04450@8.05504,BJ@5.87744,GM12878@6.99655,H1HESC@10.0282,HELAS3@12.8027,HEPG2@9.74217,HMEC@1.07543,HSMM@1.71969,HUVEC@14.5081,K562@4.87228,MCF7@3.87708,NHEK@4.50386,NHLF@2.30182,SKNSHRA@11.8431, 0 0 0 0 ENSG00000230590.1 ENST00000455395.1 chrX:73500296-73511910 4 650 10958 intergenic 1.24 0 0,1,1 1 0,0,0 0 18.9905092170104 0 59.0738461538462 11.8559956196386 7.531 59.5230769230769 12.2041430918051 7.511 0 0 chimp,cow,human,macaque,marmoset,orangutan, lincRNA processed_transcript A549@10.2364,AG04450@8.05504,BJ@5.87744,GM12878@6.99655,H1HESC@10.0282,HELAS3@12.8027,HEPG2@9.74217,HMEC@1.07543,HSMM@1.71969,HUVEC@14.5081,K562@4.87228,MCF7@3.87708,NHEK@4.50386,NHLF@2.30182,SKNSHRA@11.8431, 0 0 0 0 ENSG00000230590.1 ENST00000423992.1 chrX:73501540-73504697 2 262 2893 intergenic -3.97 0 0,1,0 0 0,0,0 0 0 0 0 0 0 0 0 0 0 0 cat,chimp,cow,dog,elephant,horse,human,macaque,marmoset,orangutan,panda,pig, lincRNA processed_transcript A549@10.2364,AG04450@8.05504,BJ@5.87744,GM12878@6.99655,H1HESC@10.0282,HELAS3@12.8027,HEPG2@9.74217,HMEC@1.07543,HSMM@1.71969,HUVEC@14.5081,K562@4.87228,MCF7@3.87708,NHEK@4.50386,NHLF@2.30182,SKNSHRA@11.8431, 0 0 0 0 ENSG00000230028.1 ENST00000431331.1 chrX:75107994-75109321 2 752 573 intronic -7.25 0 0,0,0 0 0,0,0 0 0 0 0 0 0 57.1848404255319 0 93.774 0 0 chimp,cow,dog,elephant,guinea_pig,horse,human,macaque,marmoset,mouse,opossum,orangutan,panda,pig,platypus,rabbit,rat, processed_transcript processed_transcript A549@0.0036635,AG04450@0.006247,BJ@0,GM12878@0.0186525,H1HESC@0.0055025,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0.003502,NHLF@0,SKNSHRA@0.0102645, 0 0 0 0 ENSG00000226854.1 ENST00000413763.1 chrX:75122940-75124693 2 1232 519 intergenic 1.60 0 0,0,0 0 0,0,0 0 0 0 0 0 0 0 0 0 0 0 chimp,human,macaque,orangutan, lincRNA lincRNA A549@0,AG04450@0,BJ@0.005799,GM12878@0,H1HESC@0.0237835,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0.0039805,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0.059589, 0 0 0 0 ENSG00000229547.2 ENST00000442533.1 chrX:84189248-84189825 2 463 112 intergenic 10.72 0 0,1,0 0 0,0,0 0 0 0 0 0 0 17.0842332613391 0 30.556 0 0 cow,elephant,guinea_pig,horse,human,macaque,opossum,orangutan,pig,rabbit, processed_transcript processed_transcript A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000229547.2 ENST00000451386.1 chrX:84189266-84189875 2 469 138 intergenic 10.72 0 0,1,1 0 0,0,0 0 0 0 0 0 0 16.865671641791 0 30.556 0 0 cow,elephant,guinea_pig,horse,human,macaque,mouse,opossum,orangutan,pig,rabbit, processed_transcript processed_transcript A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000235461.1 ENST00000443247.1 chrX:84465712-84474704 4 1131 7855 intergenic -0.50 1 0,0,1 0 0,0,0 0 2.96880967536601 0 51.9425287356322 4.4053469127944 2.104 54.1122900088417 4.47511139401655 2.12 0 0 cat,chimp,cow,dog,elephant,guinea_pig,horse,human,macaque,marmoset,mouse,orangutan,panda,pig,rabbit,rat, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000225012.1 ENST00000420327.1 chrX:88678737-88696910 2 279 17892 intergenic -5.49 0 0,0,0 0 0,0,0 0 0 0 74.2114695340502 3.49357254638945 0 331.258064516129 6.62033310976973 0 0 0 chimp,elephant,horse,human,macaque,marmoset,mouse,opossum,orangutan,pig,rabbit,rat, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0.0135525,HEPG2@0.007743,HMEC@0,HSMM@0,HUVEC@0.0409475,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000225012.1 ENST00000435867.1 chrX:88678737-88701982 3 305 22936 intergenic -2.56 1 0,0,0 0 0,0,0 0 0 0 22.4196721311475 3.32987443320544 0 113.4 7.66123125217998 0 0 0 chimp,elephant,horse,human,macaque,marmoset,orangutan,rabbit, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0.0135525,HEPG2@0.007743,HMEC@0,HSMM@0,HUVEC@0.0409475,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 170 2 0 0 ENSG00000206062.4 ENST00000418369.1 chrX:90562780-90563877 2 739 356 intergenic 0.80 0 0,0,0 0 0,0,0 0 0 0 0 0 0 0 0 0 0 0 chimp,human,macaque,orangutan, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000234161.1 ENST00000456187.1 chrX:90669877-90689998 4 422 19693 intronic 0.52 0 0,1,0 0 0,0,0 99.6398104265403 3.93672878687859 446.494 63.3696682464455 4.92799471893566 607.3 104.236966824645 18.1091758492865 652.058 0 0 cat,chimp,elephant,guinea_pig,human,macaque,marmoset,orangutan,rat, antisense antisense A549@0,AG04450@0.0138985,BJ@0.0115585,GM12878@0,H1HESC@0.0279045,HELAS3@0.0325535,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0.009059,SKNSHRA@0.006314, 0 0 0 0 ENSG00000255955.1 ENST00000540909.1 chrX:91354536-91360178 4 2002 3634 intronic 5.10 0 0,0,1 0 0,0,0 0 0 0 0 0 0 0 0 0 0 0 human, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0.0029155,H1HESC@77.2387,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0.005571,HUVEC@0.016843,K562@0,MCF7@0,NHEK@0,NHLF@0.0150665,SKNSHRA@0, 0 0 0 0 ENSG00000236256.3 ENST00000439759.1 chrX:96686257-96819492 6 1122 132103 intronic 2.55 0 0,0,0 0 0,0,0 102.563279857398 42.4451223666381 10.78 10.6069518716578 34.3205680416039 5.952 17.0900178253119 34.1439255732269 13.882 0 0 chimp,cow,dog,elephant,guinea_pig,horse,human,macaque,marmoset,mouse,orangutan,panda,pig,rabbit,rat, antisense antisense A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0.018075,HSMM@0,HUVEC@0.004911,K562@0.006532,MCF7@0,NHEK@0.046495,NHLF@0,SKNSHRA@0.152166, 0 0 0 0 ENSG00000236256.3 ENST00000445414.1 chrX:96788172-96872258 3 603 83479 exonic -0.94 0 0,1,0 0 0,0,0 0 40.1057032307526 0 0 38.754117802082 9.932 0 40.2440853388277 13.177 0 0 chimp,elephant,horse,human,macaque,marmoset,orangutan,pig,rabbit, antisense antisense A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0.018075,HSMM@0,HUVEC@0.004911,K562@0.006532,MCF7@0,NHEK@0.046495,NHLF@0,SKNSHRA@0.152166, 0 0 0 0 ENSG00000236256.3 ENST00000542084.1 chrX:96857829-96897588 3 447 39308 exonic -0.61 0 0,0,0 0 0,0,0 0 36.5178335198942 5.434 0 34.1629184898748 1.912 0 35.0171466368169 1.944 0 0 chimp,dog,horse,human,macaque,marmoset,orangutan,panda,pig, antisense antisense A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0.018075,HSMM@0,HUVEC@0.004911,K562@0.006532,MCF7@0,NHEK@0.046495,NHLF@0,SKNSHRA@0.152166, 0 0 0 0 ENSG00000228609.1 ENST00000456301.1 chrX:100258821-100262962 2 3214 925 intergenic -3.88 0 0,0,0 0 0,0,0 0 0 0 0 0 0 0 0 1.757 0 0 human,orangutan, lincRNA lincRNA A549@0.728931,AG04450@0.310422,BJ@0.380397,GM12878@0.44456,H1HESC@0.377478,HELAS3@0.820966,HEPG2@0.364019,HMEC@0.462983,HSMM@0.399004,HUVEC@0.656483,K562@0.672295,MCF7@0.791017,NHEK@0.455926,NHLF@0.360713,SKNSHRA@0.287398, 0 0 0 0 ENSG00000225839.1 ENST00000443801.1 chrX:100297573-100298694 2 399 720 intronic -3.38 0 0,0,0 0 0,0,0 0 0 64.125 0 0 62.464 0 0 63.282 0 0 chimp,human,orangutan, antisense antisense A549@0,AG04450@0,BJ@0,GM12878@0.007293,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000228275.1 ENST00000454228.1 chrX:100877973-100879154 2 488 691 exonic 11.39 0 0,1,0 0 0,0,0 247.819672131148 112.926193921852 259.486 326.424180327869 142.461649782923 158.335 307.866803278689 130.263386396527 155.324 0 0 cat,chimp,cow,dog,elephant,guinea_pig,horse,human,macaque,marmoset,mouse,orangutan,panda,pig,rabbit,rat, antisense antisense A549@0,AG04450@0.0131615,BJ@0.057914,GM12878@0.0047835,H1HESC@0.0496835,HELAS3@0.0046115,HEPG2@0,HMEC@0,HSMM@0.0135035,HUVEC@0.0353295,K562@0,MCF7@0.0374265,NHEK@0.0134597,NHLF@0.0357495,SKNSHRA@0.139038, 0 0 0 0 ENSG00000196970.3 ENST00000360035.2 chrX:101804893-101826623 17 3600 18098 intergenic 25.77 0 0,0,1 0 0,0,0 0 0 0 8.79972222222222 0.626422809150182 4.78 82.94 15.7887611890817 0 0 0 human,macaque,marmoset,orangutan,panda, processed_transcript processed_transcript A549@0.0032085,AG04450@0.001637,BJ@0,GM12878@0,H1HESC@0.0050305,HELAS3@0.0006245,HEPG2@0.0087445,HMEC@0,HSMM@0.002388,HUVEC@0,K562@0.0113945,MCF7@0.001687,NHEK@0,NHLF@0,SKNSHRA@0.0078315, 0 0 0 0 ENSG00000223546.2 ENST00000431616.1 chrX:102024089-102139094 5 556 114441 intergenic -0.94 0 1,1,1 1 0,0,0 0 0.351796995831913 0 0 1.649068078748 0 0 28.5853671324088 0 0 0 cat,chimp,horse,human,macaque,marmoset,orangutan,rabbit, lincRNA processed_transcript A549@6.44939,AG04450@3.36034,BJ@2.33162,GM12878@3.14389,H1HESC@4.88935,HELAS3@6.34755,HEPG2@3.97161,HMEC@2.34731,HSMM@1.16642,HUVEC@3.41676,K562@5.53904,MCF7@3.34285,NHEK@2.26713,NHLF@1.3104,SKNSHRA@8.36069, 0 0 0 0 ENSG00000223546.2 ENST00000440496.1 chrX:102024107-102140334 8 2093 114120 intergenic 0.74 1 1,1,1 1 0,0,0 0 0.352786540483701 0 0 1.65370662460568 0 0 28.6657728706625 0 0 0 cat,chimp,cow,dog,horse,human,macaque,marmoset,orangutan,panda, lincRNA processed_transcript A549@6.44939,AG04450@3.36034,BJ@2.33162,GM12878@3.14389,H1HESC@4.88935,HELAS3@6.34755,HEPG2@3.97161,HMEC@2.34731,HSMM@1.16642,HUVEC@3.41676,K562@5.53904,MCF7@3.34285,NHEK@2.26713,NHLF@1.3104,SKNSHRA@8.36069, 0 0 0 0 ENSG00000223546.2 ENST00000420471.1 chrX:102024109-102094892 6 832 69941 intergenic 4.11 0 0,1,0 1 0,0,0 0 0.575628029339014 0 0 2.56703507241818 0 0 46.6405970746773 0 0 0 cat,chimp,horse,human,macaque,marmoset,orangutan,pig,rabbit, lincRNA processed_transcript A549@6.44939,AG04450@3.36034,BJ@2.33162,GM12878@3.14389,H1HESC@4.88935,HELAS3@6.34755,HEPG2@3.97161,HMEC@2.34731,HSMM@1.16642,HUVEC@3.41676,K562@5.53904,MCF7@3.34285,NHEK@2.26713,NHLF@1.3104,SKNSHRA@8.36069, 0 0 0 0 ENSG00000223546.2 ENST00000435966.1 chrX:102024146-102082072 4 564 57356 intergenic -2.45 0 1,1,1 1 0,0,0 0 0.398912058023572 0 0 3.13029151265779 0 0 56.8744333635539 0 0 0 cat,chimp,horse,human,macaque,marmoset,orangutan,pig, lincRNA processed_transcript A549@6.44939,AG04450@3.36034,BJ@2.33162,GM12878@3.14389,H1HESC@4.88935,HELAS3@6.34755,HEPG2@3.97161,HMEC@2.34731,HSMM@1.16642,HUVEC@3.41676,K562@5.53904,MCF7@3.34285,NHEK@2.26713,NHLF@1.3104,SKNSHRA@8.36069, 0 0 0 0 ENSG00000223546.2 ENST00000416381.1 chrX:102094836-102121752 3 2009 24903 intergenic -1.19 1 0,0,0 0 0,0,0 0 0 0 0 0.36863028550777 0 0 0.371360880215235 0 0 0 chimp,human,macaque,marmoset,orangutan,pig, lincRNA processed_transcript A549@6.44939,AG04450@3.36034,BJ@2.33162,GM12878@3.14389,H1HESC@4.88935,HELAS3@6.34755,HEPG2@3.97161,HMEC@2.34731,HSMM@1.16642,HUVEC@3.41676,K562@5.53904,MCF7@3.34285,NHEK@2.26713,NHLF@1.3104,SKNSHRA@8.36069, 0 0 0 0 ENSG00000239407.1 ENST00000426528.1 chrX:102139342-102161086 6 1127 20607 intergenic 2.11 0 0,0,0 0 0,0,0 0 0 0 0 0 0 0 0 0 0 0 chimp,horse,human,macaque,marmoset,orangutan, lincRNA processed_transcript A549@1.49656,AG04450@0.712181,BJ@1.0033,GM12878@0.733711,H1HESC@0.964089,HELAS3@0.707969,HEPG2@0.605657,HMEC@0.0351,HSMM@0.232296,HUVEC@0.291417,K562@1.36037,MCF7@0.341925,NHEK@0.808969,NHLF@0.305566,SKNSHRA@1.03969, 0 0 0 0 ENSG00000239407.1 ENST00000429932.1 chrX:102152509-102160619 4 435 7669 intergenic 2.11 0 0,0,1 0 0,0,0 0 0 0 0 0 0 0 0 0 0 0 chimp,cow,dog,human,macaque,marmoset,orangutan,rabbit, lincRNA processed_transcript A549@1.49656,AG04450@0.712181,BJ@1.0033,GM12878@0.733711,H1HESC@0.964089,HELAS3@0.707969,HEPG2@0.605657,HMEC@0.0351,HSMM@0.232296,HUVEC@0.291417,K562@1.36037,MCF7@0.341925,NHEK@0.808969,NHLF@0.305566,SKNSHRA@1.03969, 0 0 0 0 ENSG00000234050.1 ENST00000413528.1 chrX:102192698-102195489 2 626 2163 exonic -3.90 0 0,0,1 0 0,0,0 0 0 0 38.7252396166134 0 0 419.613418530351 0 0 0 0 cat,chimp,cow,elephant,guinea_pig,horse,human,macaque,marmoset,orangutan,panda,pig,rabbit, antisense antisense A549@0.071989,AG04450@0.0529045,BJ@0.022067,GM12878@0.0502395,H1HESC@0.0473235,HELAS3@0,HEPG2@0,HMEC@0.00652,HSMM@0.006553,HUVEC@0,K562@0.023038,MCF7@0.003274,NHEK@0.0163913,NHLF@0.024787,SKNSHRA@0.099746, 0 0 0 0 ENSG00000234405.1 ENST00000445990.1 chrX:102752451-102755245 2 630 2162 exonic -14.15 0 0,1,0 0 0,0,0 61.2444444444444 0 0 63.431746031746 0 0 568.285714285714 0 0 0 0 cat,chimp,cow,elephant,guinea_pig,horse,human,macaque,marmoset,orangutan,panda,rabbit, antisense antisense A549@0.582605,AG04450@0.642612,BJ@0.474871,GM12878@0.28884,H1HESC@0.983837,HELAS3@0,HEPG2@0.040669,HMEC@0.116619,HSMM@0.108046,HUVEC@0.288992,K562@0.163156,MCF7@0.0740315,NHEK@0.120799,NHLF@0.190317,SKNSHRA@0.58458, 0 0 0 0 ENSG00000228885.1 ENST00000412375.1 chrX:102753723-102754210 2 416 69 intergenic -15.22 0 0,0,0 0 0,0,0 0 0 0 0 0 0 0 0 0 0 0 chimp,human,macaque,marmoset,orangutan, antisense antisense A549@0.0159295,AG04450@0.0246115,BJ@0.0192145,GM12878@0.0318065,H1HESC@0.053051,HELAS3@0,HEPG2@0,HMEC@0.423391,HSMM@0,HUVEC@0,K562@0.021308,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0.0072465, 0 0 0 0 ENSG00000224031.1 ENST00000424887.1 chrX:102881004-102881420 2 359 55 intergenic -2.86 0 0,0,0 0 0,0,0 0 0 0 0 0 0 0 0 0 0 0 cat,chimp,cow,dog,horse,human,macaque,marmoset,orangutan,panda,pig, antisense antisense A549@0.07459,AG04450@0.036704,BJ@0.026642,GM12878@0.101886,H1HESC@0.008232,HELAS3@0.232047,HEPG2@0.0903635,HMEC@0,HSMM@0.0056995,HUVEC@0.0208675,K562@0.051733,MCF7@0.151757,NHEK@0,NHLF@0,SKNSHRA@0.0783095, 0 0 0 0 ENSG00000231154.1 ENST00000435306.1 chrX:102942212-102946700 3 2083 2401 exonic 0.27 0 1,1,1 1 0,0,0 3.90782525204033 3.92753019575177 370.419 14.6404224675948 11.4639733444398 314.08 14.2986077772444 11.3740108288213 303.24 0 0 chimp,cow,elephant,guinea_pig,human,macaque,marmoset,orangutan,panda,pig, lincRNA processed_transcript A549@0.203309,AG04450@0.0633855,BJ@0.0850805,GM12878@0.318828,H1HESC@0.362784,HELAS3@0.403955,HEPG2@0.339423,HMEC@0.031407,HSMM@0.083679,HUVEC@0.138257,K562@0.436072,MCF7@0.801569,NHEK@0.0462,NHLF@0.035374,SKNSHRA@0.205163, 0 0 0 0 ENSG00000231728.1 ENST00000447281.1 chrX:103172005-103174131 4 1225 895 intergenic 3.02 0 0,0,1 0 0,0,0 0 0 0 1.18204081632653 26.4234636871508 2.39 1.16897959183673 26.3072625698324 2.43 0 0 human,macaque,orangutan, lincRNA processed_transcript A549@0.200995,AG04450@0.218664,BJ@0.0995,GM12878@0.731964,H1HESC@0.150488,HELAS3@0,HEPG2@0,HMEC@0.109945,HSMM@0.0846785,HUVEC@0.190341,K562@0,MCF7@0.286933,NHEK@0.043204,NHLF@0.050816,SKNSHRA@0.346245, 0 0 0 0 ENSG00000158427.9 ENST00000419165.1 chrX:103173479-103220554 4 1656 45413 intergenic 3.03 0 1,1,1 1 0,0,1 0 0.384911809393786 0 39.68961352657 13.968709400392 0 44.6026570048309 13.7682601898135 0 0 0 elephant,human, processed_transcript processed_transcript A549@1.20779,AG04450@1.98716,BJ@0.87294,GM12878@5.30535,H1HESC@1.61354,HELAS3@0,HEPG2@0,HMEC@2.11205,HSMM@1.6602,HUVEC@2.00542,K562@0.0294575,MCF7@3.3197,NHEK@1.06888,NHLF@1.13141,SKNSHRA@2.71128, 0 0 0 0 ENSG00000158427.9 ENST00000455723.1 chrX:103173770-103187485 2 2000 11713 intergenic -1.34 0 1,1,1 1 0,0,0 0 0 0 0 52.0397848544352 3.315 0 51.2122428071374 3.367 0 0 guinea_pig,human,macaque,marmoset,orangutan, processed_transcript processed_transcript A549@1.20779,AG04450@1.98716,BJ@0.87294,GM12878@5.30535,H1HESC@1.61354,HELAS3@0,HEPG2@0,HMEC@2.11205,HSMM@1.6602,HUVEC@2.00542,K562@0.0294575,MCF7@3.3197,NHEK@1.06888,NHLF@1.13141,SKNSHRA@2.71128, 0 0 0 0 ENSG00000158427.9 ENST00000540220.1 chrX:103217224-103220868 3 944 2696 intergenic -2.28 0 0,1,0 1 0,0,1 0 0 0 66.1133474576271 5.13575667655786 0 74.676906779661 5.38204747774481 0 0 0 cat,chimp,cow,dog,elephant,horse,human,macaque,marmoset,mouse,orangutan,pig,rabbit, processed_transcript processed_transcript A549@1.20779,AG04450@1.98716,BJ@0.87294,GM12878@5.30535,H1HESC@1.61354,HELAS3@0,HEPG2@0,HMEC@2.11205,HSMM@1.6602,HUVEC@2.00542,K562@0.0294575,MCF7@3.3197,NHEK@1.06888,NHLF@1.13141,SKNSHRA@2.71128, 0 0 0 0 ENSG00000158427.9 ENST00000436583.1 chrX:103217242-103220554 3 2183 1125 intergenic 5.39 0 1,1,1 1 0,0,1 0 0 0 33.5158039395328 2.74844444444444 0 37.3234081539166 3.136 0 0 0 chimp,human,macaque,marmoset,orangutan, processed_transcript processed_transcript A549@1.20779,AG04450@1.98716,BJ@0.87294,GM12878@5.30535,H1HESC@1.61354,HELAS3@0,HEPG2@0,HMEC@2.11205,HSMM@1.6602,HUVEC@2.00542,K562@0.0294575,MCF7@3.3197,NHEK@1.06888,NHLF@1.13141,SKNSHRA@2.71128, 0 0 0 0 ENSG00000166707.4 ENST00000423478.1 chrX:103356822-103357563 2 193 546 intronic 0 0 0,1,0 0 0,0,1 13.7305699481865 32.032967032967 14.136 13.8652849740933 103.199633699634 1.912 13.4611398963731 90 1.944 0 0 chimp,cow,horse,human,macaque,marmoset,orangutan,panda,pig,rabbit, lincRNA processed_transcript A549@0.0333115,AG04450@0.329651,BJ@0.170506,GM12878@0.738536,H1HESC@0.428295,HELAS3@0.0049815,HEPG2@0.020421,HMEC@0.130355,HSMM@0.154475,HUVEC@0.35982,K562@0.0060565,MCF7@0.745008,NHEK@0.00849433,NHLF@0.0705705,SKNSHRA@1.27535, 0 0 0 0 ENSG00000166707.4 ENST00000537356.1 chrX:103357107-103360531 3 3042 378 intronic 21.61 1 1,1,1 0 0,0,1 88.0614727153189 31.4285714285714 34.541 32.1791584483892 0 45.285 24.8454963839579 0 43.671 0 0 chimp,cow,elephant,horse,human,macaque,marmoset,mouse,orangutan,panda,pig,rabbit, lincRNA processed_transcript A549@0.0333115,AG04450@0.329651,BJ@0.170506,GM12878@0.738536,H1HESC@0.428295,HELAS3@0.0049815,HEPG2@0.020421,HMEC@0.130355,HSMM@0.154475,HUVEC@0.35982,K562@0.0060565,MCF7@0.745008,NHEK@0.00849433,NHLF@0.0705705,SKNSHRA@1.27535, 0 0 0 0 ENSG00000166707.4 ENST00000422784.1 chrX:103357235-103360533 4 1237 2055 intronic 1.42 1 1,1,1 1 0,0,1 32.9571544058205 116.16301703163 34.541 0 39.8019464720195 61.381 0 31.6963503649635 54.115 0 0 cat,chimp,elephant,guinea_pig,horse,human,macaque,marmoset,orangutan,panda,pig,rabbit, lincRNA processed_transcript A549@0.0333115,AG04450@0.329651,BJ@0.170506,GM12878@0.738536,H1HESC@0.428295,HELAS3@0.0049815,HEPG2@0.020421,HMEC@0.130355,HSMM@0.154475,HUVEC@0.35982,K562@0.0060565,MCF7@0.745008,NHEK@0.00849433,NHLF@0.0705705,SKNSHRA@1.27535, 0 0 0 0 ENSG00000227610.1 ENST00000415252.1 chrX:106756213-106789051 2 455 32381 exonic -5.07 0 0,0,1 0 0,0,0 91.3230769230769 20.3570303573083 9.3 140.16043956044 31.0153176245329 17.692 127.512087912088 30.8038047002872 14.379 0 0 cat,chimp,cow,dog,elephant,guinea_pig,horse,human,macaque,marmoset,mouse,opossum,orangutan,panda,rabbit, antisense antisense A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000236064.1 ENST00000430140.1 chrX:107137827-107179210 4 2086 39291 intronic 1.01 0 0,0,0 0 0,0,0 0 46.0371840879591 0 2.37296260786194 50.502812348884 0 1.73825503355705 47.0539309256573 0 0 0 cat,chimp,dog,horse,human,macaque,marmoset,orangutan, lincRNA processed_transcript A549@0.0093395,AG04450@0,BJ@0,GM12878@0,H1HESC@0.027511,HELAS3@0,HEPG2@0,HMEC@0.015673,HSMM@0,HUVEC@0,K562@0,MCF7@0.0019675,NHEK@0.025411,NHLF@0.000923,SKNSHRA@0, 0 0 0 0 ENSG00000237863.1 ENST00000436013.1 chrX:107979770-107982133 3 1139 1220 intergenic 5.78 0 0,1,0 0 0,0,0 0 0 354.42 19.5434591747147 37.2180327868852 383.063 15.6233538191396 30.7180327868852 433.252 0 0 chimp,cow,dog,elephant,horse,human,macaque,marmoset,orangutan,panda,pig,rabbit, lincRNA processed_transcript A549@0,AG04450@0,BJ@0,GM12878@0.007061,H1HESC@0.622643,HELAS3@0,HEPG2@0.007581,HMEC@0,HSMM@0,HUVEC@0.015591,K562@0,MCF7@0.062655,NHEK@0,NHLF@0.003417,SKNSHRA@0, 0 0 0 0 ENSG00000224142.1 ENST00000418848.1 chrX:109548648-109550449 2 559 1240 intronic -17.28 0 0,0,0 0 0,0,0 0 0 0 0 9.34838709677419 0 1.85330948121646 9.28629032258065 0 0 0 chimp,human,macaque,marmoset,orangutan, sense_intronic sense_intronic A549@0.0370895,AG04450@0.0320885,BJ@0.052832,GM12878@0.0047825,H1HESC@0.0279495,HELAS3@0.0730615,HEPG2@0.031237,HMEC@0.007871,HSMM@0,HUVEC@0,K562@0.054738,MCF7@0.068508,NHEK@0.010791,NHLF@0.25057,SKNSHRA@0.0230625, 1 96 0 0 ENSG00000229487.1 ENST00000430794.1 chrX:110949877-110954329 2 193 4257 intronic 0 0 0,0,0 0 0,0,0 0 50.6542165844491 71.74 0 44.5313601127555 79.655 0 42.7211651397698 79.1 0 0 chimp,human,macaque,marmoset,orangutan, antisense antisense A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000204025.2 ENST00000371970.2 chrX:111125125-111147218 4 2802 19285 intronic 5.22 1 0,0,0 0 0,0,1 0 15.0979517759917 0 6.19914346895075 11.2914182006741 0 6.24339757316203 12.0438682914182 0 0 0 cat,dog,elephant,guinea_pig,horse,human,macaque,marmoset,orangutan,panda,pig,rabbit, antisense antisense A549@0.00661,AG04450@0,BJ@0.00255,GM12878@0.023323,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0.0081455,HUVEC@0,K562@0,MCF7@0,NHEK@0.00278767,NHLF@0.004126,SKNSHRA@0.0051515, 0 0 0 0 ENSG00000241743.1 ENST00000468762.1 chrX:112859587-112861440 2 469 1382 intergenic -4.95 1 0,0,0 0 0,0,0 0 0 0 0 0 59.787 0 0 58.956 0 0 chimp,cow,horse,human,macaque,marmoset,orangutan, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0.102856,H1HESC@0.284608,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0.288345,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000223444.1 ENST00000435767.1 chrX:113992533-113995378 2 463 2380 intronic -1.05 0 0,0,0 0 0,0,0 0 0 0 0 0 0 0 0 0 0 0 cat,chimp,dog,elephant,human,macaque,marmoset,orangutan, sense_intronic sense_intronic A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000256559.1 ENST00000543279.1 chrX:114752497-114797058 3 1753 42804 intronic 2.09 0 1,1,1 0 0,0,0 5.80034227039361 16.2599990655079 56.038 3.28579577866515 13.6728810391552 28.839 3.39817455790074 12.283384730399 26.466 0 0 chimp,horse,human,macaque,marmoset, lincRNA lincRNA A549@0.225612,AG04450@0.0963445,BJ@0.132382,GM12878@0.252339,H1HESC@0.288509,HELAS3@4.21136,HEPG2@0.509767,HMEC@0.125917,HSMM@0.0446485,HUVEC@0.250877,K562@0,MCF7@0.0254735,NHEK@0.314841,NHLF@0.226729,SKNSHRA@0.092729, 0 0 0 0 ENSG00000246653.3 ENST00000359806.4 chrX:114829875-114833648 2 2236 1535 intronic -3.34 0 0,0,1 0 0,0,0 0 0 0 8.32915921288014 0 0 8.26520572450805 0 0 0 1 chimp,human,marmoset,orangutan, lincRNA lincRNA A549@0,AG04450@0,BJ@0.002892,GM12878@0,H1HESC@0.002601,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0.0015615,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000229335.1 ENST00000451869.1 chrX:114957297-114959381 3 441 1639 intergenic -11.75 0 0,1,0 1 0,0,0 0 0 0 0 0 0 0 0 0 0 0 chimp,human,macaque,marmoset,orangutan, antisense antisense A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@1.46644,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0.00584833,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000229335.1 ENST00000415394.1 chrX:114957343-114959383 2 278 1760 intergenic -14.69 0 0,0,0 1 0,0,0 0 0 0 0 0 0 0 0 0 0 0 chimp,human,macaque,marmoset,orangutan, antisense antisense A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@1.46644,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0.00584833,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000235244.2 ENST00000430756.1 chrX:115032519-115085422 4 2441 50456 intergenic 9.68 1 0,1,0 1 0,0,0 0 0 0 0 0.078583320120501 0 0 1.22276835262407 0 0 0 chimp,human,macaque,orangutan, lincRNA processed_transcript A549@0.982934,AG04450@0.0132705,BJ@0.0919415,GM12878@0.638303,H1HESC@0.832861,HELAS3@0.4892,HEPG2@0.367046,HMEC@0.188642,HSMM@0.0435205,HUVEC@0.193688,K562@0.0018995,MCF7@0.680106,NHEK@0.375347,NHLF@0.001596,SKNSHRA@1.16863, 0 0 0 0 ENSG00000230159.1 ENST00000446495.1 chrX:115826878-115828156 2 510 766 intergenic -1.14 1 0,0,0 0 0,0,0 0 0 0 0 0 0 0 0 0 0 0 chimp,cow,dog,elephant,human,macaque,marmoset,orangutan,panda, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0.0081035,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0.027734,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000203650.2 ENST00000412422.1 chrX:117973519-117991849 7 2283 16035 intergenic 6.61 0 0,1,0 0 0,0,0 0 5.58185219831618 0 0 9.64602432179607 1.61 0 9.36251948861865 0 0 0 human,macaque,marmoset,orangutan, lincRNA processed_transcript A549@0.197613,AG04450@0.0019575,BJ@0.01055,GM12878@0,H1HESC@0.17078,HELAS3@0.027341,HEPG2@0.0773525,HMEC@0,HSMM@0.0388535,HUVEC@0.036246,K562@0.002028,MCF7@0.0150445,NHEK@0.00338,NHLF@0.010187,SKNSHRA@0.199226, 0 0 0 0 ENSG00000214992.4 ENST00000431706.1 chrX:118386774-118391646 3 916 3952 intergenic 2.90 0 0,0,0 0 0,0,0 178.198689956332 6.76012145748988 0 397.757641921397 1.31503036437247 0 441.747816593887 3.67105263157895 2.008 0 0 cat,chimp,cow,dog,elephant,guinea_pig,horse,human,macaque,marmoset,mouse,opossum,orangutan,panda,pig,platypus,rabbit,rat, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000214992.4 ENST00000543565.1 chrX:118388712-118391633 3 813 2104 intergenic -2.06 0 0,0,0 0 0,0,0 176.182041820418 19.6549429657795 0 402.081180811808 10.921102661597 0 447.835178351784 13.773288973384 2.782 0 0 cat,chimp,cow,dog,elephant,guinea_pig,horse,human,macaque,marmoset,mouse,orangutan,panda,pig,platypus,rabbit,rat, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000230392.1 ENST00000428222.1 chrX:118425492-118469573 4 2903 41172 intergenic 5.34 1 0,1,1 0 0,0,0 0 3.49540950160303 0 0 1.51442728067619 0 0 1.45394928592247 0 0 0 chimp,human, lincRNA lincRNA A549@0.010221,AG04450@0,BJ@0,GM12878@0.016084,H1HESC@0.023263,HELAS3@0.125535,HEPG2@0.104322,HMEC@0,HSMM@0,HUVEC@0,K562@0.165722,MCF7@0.0254835,NHEK@0.00359933,NHLF@0,SKNSHRA@0.004975, 0 0 0 0 ENSG00000226661.1 ENST00000413240.1 chrX:118490264-118527558 3 632 36658 intergenic -2.10 0 0,0,0 0 0,0,0 0 4.44898794260462 0 0 3.12300180042556 0 0 5.68397075672432 0 0 0 chimp,horse,human,macaque,marmoset,orangutan,panda, antisense antisense A549@0.0034185,AG04450@0.0107685,BJ@0.003811,GM12878@0.031155,H1HESC@0.011117,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0.027661,K562@0.0042165,MCF7@0.019212,NHEK@0.006228,NHLF@0,SKNSHRA@0.007146, 0 0 0 0 ENSG00000237903.1 ENST00000414435.1 chrX:118556880-118557510 2 431 197 intronic 0 0 0,0,0 0 0,0,0 0 0 0 0 0 3.188 0 0 3.263 0 0 chimp,human,macaque,marmoset,orangutan, sense_intronic sense_intronic A549@0.146513,AG04450@0.0263905,BJ@0.02926,GM12878@0.048741,H1HESC@0.006114,HELAS3@0.014216,HEPG2@0.0043905,HMEC@0,HSMM@0,HUVEC@0.069781,K562@0.0281425,MCF7@0.0092535,NHEK@0.0353153,NHLF@0.0045895,SKNSHRA@0.0073815, 0 0 0 0 ENSG00000224281.3 ENST00000446986.1 chrX:118599997-118602225 2 1872 354 intergenic 1.33 1 1,1,1 0 0,0,0 9.82371794871795 0 78.81 5.17521367521368 0 99.363 5.34081196581197 0 115.033 0 0 chimp,elephant,human,macaque,marmoset,orangutan, lincRNA processed_transcript A549@0.210738,AG04450@0.0735425,BJ@0.0647865,GM12878@0.491907,H1HESC@0.266203,HELAS3@0.579159,HEPG2@0.231015,HMEC@0.053964,HSMM@0.148792,HUVEC@0.091252,K562@0.549731,MCF7@0.446297,NHEK@0.0580677,NHLF@0.064721,SKNSHRA@0.283247, 0 0 0 0 ENSG00000224281.3 ENST00000395539.2 chrX:118599997-118603058 1 3061 0 exonic 21.99 1 1,1,1 1 0,0,0 29.9928128062725 0 274.732 30.7141457040183 0 282.531 36.09441359033 0 298.167 0 1 human,macaque,marmoset,orangutan, lincRNA processed_transcript A549@0.210738,AG04450@0.0735425,BJ@0.0647865,GM12878@0.491907,H1HESC@0.266203,HELAS3@0.579159,HEPG2@0.231015,HMEC@0.053964,HSMM@0.148792,HUVEC@0.091252,K562@0.549731,MCF7@0.446297,NHEK@0.0580677,NHLF@0.064721,SKNSHRA@0.283247, 0 0 0 0 ENSG00000224281.3 ENST00000445759.1 chrX:118600387-118603061 2 1614 1058 intronic -0.16 1 1,1,1 1 0,0,0 35.8234200743494 33.0812854442344 275.41 14.0148698884758 68.4092627599244 283.398 14.6121437422553 83.0359168241966 298.956 0 0 guinea_pig,human,macaque,marmoset,orangutan, lincRNA processed_transcript A549@0.210738,AG04450@0.0735425,BJ@0.0647865,GM12878@0.491907,H1HESC@0.266203,HELAS3@0.579159,HEPG2@0.231015,HMEC@0.053964,HSMM@0.148792,HUVEC@0.091252,K562@0.549731,MCF7@0.446297,NHEK@0.0580677,NHLF@0.064721,SKNSHRA@0.283247, 0 0 0 0 ENSG00000227285.1 ENST00000455986.1 chrX:119055224-119056803 2 808 769 intergenic -15.12 0 0,1,0 0 0,0,0 34.4777227722772 0 0 4.86386138613861 10.260078023407 0 4.53960396039604 10.3381014304291 0 0 0 chimp,cow,dog,elephant,horse,human,macaque,marmoset,orangutan,panda,pig,rabbit, antisense antisense A549@0.518535,AG04450@0.3095,BJ@0.200726,GM12878@0.396711,H1HESC@0.157294,HELAS3@0.385105,HEPG2@0.108248,HMEC@0.080881,HSMM@0.380681,HUVEC@0.054752,K562@0.557394,MCF7@0.230589,NHEK@0.288163,NHLF@0.436068,SKNSHRA@0.438642, 0 0 0 0 ENSG00000234493.1 ENST00000454625.1 chrX:119144675-119149501 4 768 4052 intergenic 15.99 0 0,0,1 0 0,0,0 0 0 0 0 0 0 0 0 0 0 0 chimp,cow,elephant,human,macaque,marmoset,orangutan, lincRNA lincRNA A549@0.019935,AG04450@0,BJ@0,GM12878@0,H1HESC@0.18046,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0.0120305,MCF7@0.214282,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000228139.1 ENST00000422226.1 chrX:119251552-119253610 3 276 1778 intergenic -4.13 0 0,0,0 0 0,0,0 0 0 0 0 0 0 0 0 0 0 0 chimp,human,macaque,orangutan, lincRNA lincRNA A549@0.01768,AG04450@0,BJ@0,GM12878@0.880351,H1HESC@0.008869,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0.0262405,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0.089523, 0 0 0 0 ENSG00000233382.3 ENST00000452254.1 chrX:119370305-119379088 3 2387 6392 intergenic 5.69 1 0,1,0 1 0,0,0 0 0 0 4.46543778801843 3.33260325406758 0 4.38248847926267 3.34073842302879 3.402 0 0 chimp,human,macaque,orangutan, lincRNA processed_transcript A549@0.486669,AG04450@0.181263,BJ@0.332799,GM12878@0.914643,H1HESC@0.905415,HELAS3@1.41941,HEPG2@1.18986,HMEC@0.155923,HSMM@0.133305,HUVEC@0.341834,K562@0.962106,MCF7@0.335201,NHEK@0.114654,NHLF@0.0816135,SKNSHRA@0.636364, 0 0 0 0 ENSG00000233382.3 ENST00000536487.1 chrX:119377874-119379122 2 515 731 intergenic 5.00 0 0,1,0 1 0,0,0 0 0 0 0 8.30232558139535 0 0 8.30232558139535 3.402 0 0 cat,chimp,cow,dog,elephant,guinea_pig,horse,human,macaque,marmoset,orangutan,panda,pig,rabbit, lincRNA processed_transcript A549@0.486669,AG04450@0.181263,BJ@0.332799,GM12878@0.914643,H1HESC@0.905415,HELAS3@1.41941,HEPG2@1.18986,HMEC@0.155923,HSMM@0.133305,HUVEC@0.341834,K562@0.962106,MCF7@0.335201,NHEK@0.114654,NHLF@0.0816135,SKNSHRA@0.636364, 0 0 0 0 ENSG00000244439.1 ENST00000424799.1 chrX:119745184-119754929 2 630 9113 intronic 2.07 0 0,0,0 0 0,0,1 0 41.7229232963898 60.375 3.41428571428571 36.722264896302 59.94 3.47142857142857 32.3284319104576 67.031 0 0 cat,chimp,cow,dog,elephant,horse,human,macaque,marmoset,orangutan,panda,pig,rabbit, processed_transcript processed_transcript A549@0.222862,AG04450@0.108912,BJ@0.112769,GM12878@0.55366,H1HESC@0.033508,HELAS3@0.398585,HEPG2@0.112996,HMEC@0.013326,HSMM@0.028187,HUVEC@0.049198,K562@0.725444,MCF7@0.199558,NHEK@0.169323,NHLF@0.018055,SKNSHRA@0.354579, 0 0 0 0 ENSG00000229033.1 ENST00000442332.1 chrX:122867024-122868144 2 851 267 intergenic 4.73 0 0,1,1 1 0,0,0 0 0 95.113 0 0 154.901 0 0 146.711 0 0 chimp,human, lincRNA processed_transcript A549@0.011566,AG04450@0.013138,BJ@0.0173175,GM12878@0.0047265,H1HESC@0.0998855,HELAS3@0.063785,HEPG2@0.056773,HMEC@0.091205,HSMM@0.164252,HUVEC@0.011402,K562@0.008166,MCF7@0.0308005,NHEK@0.00448967,NHLF@0.0137245,SKNSHRA@0.0297745, 3 10 0 0 ENSG00000237331.1 ENST00000458331.1 chrX:123006476-123007782 2 480 824 intronic -2.06 0 0,0,0 0 0,0,0 0 0 0 0 0 0 0 0 0 0 0 NA antisense antisense A549@0,AG04450@0,BJ@0,GM12878@0.0060675,H1HESC@0,HELAS3@0.0110125,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000232412.1 ENST00000426367.1 chrX:123093083-123095191 2 324 1782 exonic -3.94 1 1,1,1 1 0,0,0 370.148148148148 303.175084175084 789 240.456790123457 203.483726150393 508.548 179.354938271605 200.40404040404 486.611 0 0 chimp,dog,elephant,guinea_pig,horse,human,macaque,marmoset,mouse,orangutan,panda,pig,rabbit,rat, lincRNA lincRNA A549@0.403099,AG04450@0.027501,BJ@0.052478,GM12878@0.231819,H1HESC@0.0203175,HELAS3@0.274494,HEPG2@0.063104,HMEC@0.01256,HSMM@0.051855,HUVEC@0.024046,K562@0.126019,MCF7@0.218087,NHEK@0.035367,NHLF@0.047749,SKNSHRA@0.128535, 0 0 0 0 ENSG00000237208.1 ENST00000438994.1 chrX:125243745-125249545 3 636 5160 intergenic -1.69 1 0,0,0 0 0,0,0 0 2.00387596899225 0 0 2.70387596899225 0 0 18.7019379844961 0 0 0 chimp,human, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0.312223,HELAS3@0.04984,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0.00838,MCF7@0.343185,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000225689.1 ENST00000449485.1 chrX:127457598-127734446 4 477 276365 intergenic 3.14 0 0,0,0 0 0,0,0 72.9559748427673 2.63584390208601 0 291.813417190776 7.13660919436253 0 322.0964360587 10.1613084145966 2.385 0 0 cat,chimp,cow,dog,elephant,guinea_pig,horse,human,macaque,marmoset,mouse,opossum,orangutan,panda,pig,platypus,rabbit,rat, lincRNA lincRNA A549@0.0334175,AG04450@0,BJ@0,GM12878@0,H1HESC@0.488898,HELAS3@0.173559,HEPG2@0.346849,HMEC@0,HSMM@0,HUVEC@0.0145325,K562@0,MCF7@0.0379025,NHEK@0,NHLF@0,SKNSHRA@0.0429935, 0 0 0 0 ENSG00000235189.1 ENST00000432062.1 chrX:129003040-129091504 4 522 87936 exonic -2.20 0 0,1,0 0 0,0,0 72.1340996168582 24.5658205967977 152.864 74.9578544061303 27.0669919032023 94.121 72.7758620689655 43.9836813136827 83.221 0 0 cat,chimp,cow,dog,elephant,horse,human,macaque,marmoset,mouse,orangutan,pig,rabbit, antisense antisense A549@0.005251,AG04450@0.008522,BJ@0.023163,GM12878@0.015576,H1HESC@0.030019,HELAS3@0.016527,HEPG2@0.0041365,HMEC@0,HSMM@0.004334,HUVEC@0.009245,K562@0.015362,MCF7@0.003909,NHEK@0,NHLF@0.0147555,SKNSHRA@0.0086345, 0 0 0 0 ENSG00000229702.1 ENST00000458525.1 chrX:129611043-129658231 12 1634 45532 intergenic 6.86 1 0,1,0 0 0,0,0 0 0.18360713344461 0 7.24296205630355 2.03134059562506 3.824 15.3984088127295 16.9636080119476 0 0 0 human,macaque, lincRNA processed_transcript A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0.052124,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0.047687,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000228659.1 ENST00000451431.1 chrX:130115564-130173820 2 399 57855 intergenic 1.75 1 0,1,0 0 0,0,0 0 27.9871229798635 0 0 32.6882205513784 1.488 0 31.3544032495031 2.65 0 0 chimp,dog,elephant,human,macaque,marmoset,orangutan,panda,rabbit, antisense antisense A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000228659.1 ENST00000412420.1 chrX:130150443-130192120 3 291 41382 intergenic 0 0 0,1,0 0 0,0,0 0 52.4114107583007 158.754 8.21305841924399 53.258228215166 154.591 5.84536082474227 49.6097820308347 140.201 0 0 cat,chimp,dog,elephant,horse,human,macaque,marmoset,orangutan,panda,pig,rabbit, antisense antisense A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000213468.3 ENST00000427391.1 chrX:130836678-130964671 13 2915 125054 intergenic 32.35 1 1,1,1 1 0,0,0 40.9578044596913 0.661282326035153 0 0.198284734133791 0.360868104978649 9.193 0.194854202401372 0.452732419594735 8.862 0 0 chimp,human,macaque,marmoset,orangutan, processed_transcript processed_transcript A549@0.068118,AG04450@0.003304,BJ@0.011394,GM12878@1.23544,H1HESC@1.89249,HELAS3@1.17389,HEPG2@0.719842,HMEC@0,HSMM@0.0599805,HUVEC@0.034622,K562@1.75264,MCF7@0.483036,NHEK@0.000436,NHLF@0.002814,SKNSHRA@0.043444, 0 0 0 0 ENSG00000232160.1 ENST00000421483.1 chrX:131351175-131564190 3 503 212508 exonic 2.47 1 0,0,1 0 0,0,0 68.6560636182903 11.7784553993261 172.681 87.5149105367793 12.2111355807781 199.785 93.6779324055666 15.5657481130122 187.569 0 0 chimp,cow,dog,elephant,guinea_pig,horse,human,macaque,marmoset,mouse,orangutan,panda,pig,rabbit,rat, antisense antisense A549@0.129599,AG04450@0.591511,BJ@0.464357,GM12878@0.125315,H1HESC@0.212445,HELAS3@0.0730995,HEPG2@0.058201,HMEC@0.071898,HSMM@0.533748,HUVEC@0.311559,K562@0.130962,MCF7@0.398926,NHEK@0.318461,NHLF@0.55743,SKNSHRA@1.13597, 0 0 0 0 ENSG00000232160.1 ENST00000441399.1 chrX:131352535-131566890 3 3471 210880 intronic 3.11 0 0,1,1 0 0,0,0 0 10.5974724962064 108.919 0 11.0349582701062 142.083 0 14.672591047041 99.945 0 0 chimp,dog,human,macaque,marmoset,mouse,orangutan, antisense antisense A549@0.129599,AG04450@0.591511,BJ@0.464357,GM12878@0.125315,H1HESC@0.212445,HELAS3@0.0730995,HEPG2@0.058201,HMEC@0.071898,HSMM@0.533748,HUVEC@0.311559,K562@0.130962,MCF7@0.398926,NHEK@0.318461,NHLF@0.55743,SKNSHRA@1.13597, 0 0 0 0 ENSG00000235849.1 ENST00000455269.1 chrX:131801670-131803916 3 547 1695 intronic 0.99 0 0,0,0 0 0,0,0 329.619744058501 149.992330383481 0 352.636197440585 113.993510324484 1.785 354.928702010969 116.538053097345 4.47 0 0 chimp,dog,elephant,horse,human,macaque,marmoset,orangutan,panda,pig,rabbit, antisense antisense A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0.0367385, 0 0 0 0 ENSG00000223749.2 ENST00000440570.1 chrX:133677367-133680662 3 757 2534 intergenic -5.42 1 0,1,1 0 0,0,0 305.247027741083 37.2975532754538 76.255 154.828269484808 50.5331491712707 106.685 150.886393659181 50.0958958168903 108.487 0 0 cat,chimp,cow,dog,guinea_pig,horse,human,macaque,marmoset,mouse,orangutan,panda,pig,rabbit,rat, lincRNA processed_transcript A549@4.11325,AG04450@15.0609,BJ@3.07409,GM12878@0.050634,H1HESC@0.136707,HELAS3@1.81008,HEPG2@0.111242,HMEC@0.311941,HSMM@14.4974,HUVEC@2.89541,K562@0.60461,MCF7@0.787942,NHEK@10.2612,NHLF@4.21796,SKNSHRA@0.751804, 0 0 0 0 ENSG00000223749.2 ENST00000414769.1 chrX:133677473-133680660 3 717 2466 intergenic -11.76 1 0,1,0 0 0,0,0 316.301255230125 38.3260340632603 76.255 157.260808926081 51.7254663422547 106.685 153.192468619247 51.2737226277372 108.487 0 0 cat,chimp,cow,dog,guinea_pig,horse,human,macaque,marmoset,mouse,orangutan,panda,pig,rabbit,rat, lincRNA processed_transcript A549@4.11325,AG04450@15.0609,BJ@3.07409,GM12878@0.050634,H1HESC@0.136707,HELAS3@1.81008,HEPG2@0.111242,HMEC@0.311941,HSMM@14.4974,HUVEC@2.89541,K562@0.60461,MCF7@0.787942,NHEK@10.2612,NHLF@4.21796,SKNSHRA@0.751804, 0 0 0 0 ENSG00000223749.2 ENST00000445415.1 chrX:133677797-133678910 2 330 781 intergenic 0 0 0,1,0 0 0,0,0 219.890909090909 121.014084507042 0 135.909090909091 120.432778489117 0 132.306060606061 117.937259923175 0 0 0 chimp,cow,dog,human,macaque,marmoset,orangutan,pig,rabbit, lincRNA processed_transcript A549@4.11325,AG04450@15.0609,BJ@3.07409,GM12878@0.050634,H1HESC@0.136707,HELAS3@1.81008,HEPG2@0.111242,HMEC@0.311941,HSMM@14.4974,HUVEC@2.89541,K562@0.60461,MCF7@0.787942,NHEK@10.2612,NHLF@4.21796,SKNSHRA@0.751804, 0 0 0 0 ENSG00000223749.2 ENST00000457876.1 chrX:133678456-133679768 2 644 666 intergenic 4.02 1 1,1,1 0 0,0,0 61.167701863354 0 28.98 60.2996894409938 0 74.303 58.7344720496894 0 73.427 0 0 chimp,dog,guinea_pig,human,macaque,marmoset,orangutan,rabbit, lincRNA processed_transcript A549@4.11325,AG04450@15.0609,BJ@3.07409,GM12878@0.050634,H1HESC@0.136707,HELAS3@1.81008,HEPG2@0.111242,HMEC@0.311941,HSMM@14.4974,HUVEC@2.89541,K562@0.60461,MCF7@0.787942,NHEK@10.2612,NHLF@4.21796,SKNSHRA@0.751804, 0 0 0 0 ENSG00000223749.2 ENST00000441492.1 chrX:133678456-133680653 3 646 1547 intergenic 6.64 1 0,1,1 0 0,0,0 60.9783281733746 0 76.255 65.7476780185758 21.2598577892696 106.685 63.812693498452 21.7983193277311 108.487 0 0 chimp,dog,elephant,guinea_pig,horse,human,macaque,marmoset,mouse,orangutan,rabbit, lincRNA processed_transcript A549@4.11325,AG04450@15.0609,BJ@3.07409,GM12878@0.050634,H1HESC@0.136707,HELAS3@1.81008,HEPG2@0.111242,HMEC@0.311941,HSMM@14.4974,HUVEC@2.89541,K562@0.60461,MCF7@0.787942,NHEK@10.2612,NHLF@4.21796,SKNSHRA@0.751804, 0 0 0 0 ENSG00000227060.1 ENST00000434384.1 chrX:133684003-133693953 3 721 9225 intergenic -0.25 0 0,1,1 0 0,0,0 0 20.0445528455285 34.5 8.80443828016644 26.3069918699187 86.27 13.747572815534 22.9784281842818 88.48 0 0 chimp,cow,guinea_pig,horse,human,macaque,marmoset,orangutan,rabbit, lincRNA processed_transcript A549@0.362817,AG04450@0.158281,BJ@0.256929,GM12878@0.049988,H1HESC@0.0143265,HELAS3@0.081894,HEPG2@0.01054,HMEC@0,HSMM@0.166592,HUVEC@0.188237,K562@0.0131985,MCF7@0.066835,NHEK@0.0679837,NHLF@0.101902,SKNSHRA@0.197584, 0 0 0 0 ENSG00000235813.1 ENST00000440614.1 chrX:133733487-133740284 4 934 5857 intronic 1.54 0 0,0,0 0 0,0,0 7.60813704496788 84.8108246542599 0 0 71.4758408741677 0 0 70.014341813215 0 0 0 chimp,human,orangutan, lincRNA lincRNA A549@0.0035955,AG04450@0,BJ@0,GM12878@0.004298,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0.004387,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0.008228,SKNSHRA@0.0096835, 0 0 0 0 ENSG00000236091.1 ENST00000441841.1 chrX:134083579-134087412 3 958 2871 intergenic -0.17 0 0,0,0 0 0,0,0 0 0 0 0 0 0 0 0 0 0 0 chimp,human,macaque,marmoset,orangutan, lincRNA lincRNA A549@0.0218025,AG04450@0.0049015,BJ@0,GM12878@0,H1HESC@0,HELAS3@0.209012,HEPG2@0.117049,HMEC@0,HSMM@0,HUVEC@0.0061935,K562@0,MCF7@0,NHEK@0,NHLF@0.0121145,SKNSHRA@0, 0 0 0 0 ENSG00000196972.5 ENST00000437661.1 chrX:134229015-134229594 2 303 274 intergenic -0.48 0 1,1,1 0 0,0,0 0 0 0 0 0 0 0 0 0 0 0 cat,chimp,cow,dog,elephant,guinea_pig,horse,human,macaque,marmoset,orangutan,panda,pig,rabbit, lincRNA processed_transcript A549@0.016367,AG04450@0.135381,BJ@0.15726,GM12878@0,H1HESC@0.636978,HELAS3@0.019461,HEPG2@0.048899,HMEC@0.151128,HSMM@0.152879,HUVEC@0.0359855,K562@0.029669,MCF7@0.0145125,NHEK@0.097761,NHLF@0.148201,SKNSHRA@0.095909, 0 0 0 0 ENSG00000196972.5 ENST00000455568.1 chrX:134229143-134232388 3 468 2773 intergenic 2.81 0 0,1,0 0 0,0,0 0 0 45.72 7.07692307692308 0 67.415 7.92307692307692 0 97.462 0 0 chimp,cow,dog,guinea_pig,horse,human,macaque,marmoset,orangutan,pig, lincRNA non_coding A549@0.016367,AG04450@0.135381,BJ@0.15726,GM12878@0,H1HESC@0.636978,HELAS3@0.019461,HEPG2@0.048899,HMEC@0.151128,HSMM@0.152879,HUVEC@0.0359855,K562@0.029669,MCF7@0.0145125,NHEK@0.097761,NHLF@0.148201,SKNSHRA@0.095909, 0 0 0 0 ENSG00000196972.5 ENST00000433425.1 chrX:134230877-134232654 2 865 910 intergenic 14.82 0 0,1,0 1 0,0,0 52.8554913294798 0 0 81.7653179190751 0 0 113.067052023121 0 3.108 0 0 cat,chimp,cow,dog,guinea_pig,horse,human,macaque,marmoset,mouse,orangutan,pig, lincRNA processed_transcript A549@0.016367,AG04450@0.135381,BJ@0.15726,GM12878@0,H1HESC@0.636978,HELAS3@0.019461,HEPG2@0.048899,HMEC@0.151128,HSMM@0.152879,HUVEC@0.0359855,K562@0.029669,MCF7@0.0145125,NHEK@0.097761,NHLF@0.148201,SKNSHRA@0.095909, 0 0 0 0 ENSG00000196972.5 ENST00000535837.1 chrX:134232427-134232630 1 203 0 intergenic 0 0 0,1,1 1 0,0,0 225.221674876847 0 0 324.926108374384 0 0 442.23645320197 0 6.165 0 0 cat,chimp,cow,dog,elephant,guinea_pig,horse,human,macaque,marmoset,mouse,opossum,orangutan,panda,pig,rabbit,rat, lincRNA processed_transcript A549@0.016367,AG04450@0.135381,BJ@0.15726,GM12878@0,H1HESC@0.636978,HELAS3@0.019461,HEPG2@0.048899,HMEC@0.151128,HSMM@0.152879,HUVEC@0.0359855,K562@0.029669,MCF7@0.0145125,NHEK@0.097761,NHLF@0.148201,SKNSHRA@0.095909, 0 0 0 0 ENSG00000228372.2 ENST00000453528.1 chrX:134250684-134257880 3 1024 6168 intergenic 1.54 1 0,0,0 0 0,0,0 0 0 0 0 0 0 0 0 0 0 0 cat,chimp,cow,horse,human,macaque,marmoset,orangutan,panda, processed_transcript processed_transcript A549@0.029381,AG04450@0.0269385,BJ@0.0199585,GM12878@0.005695,H1HESC@0.0973325,HELAS3@0.0081285,HEPG2@0,HMEC@0,HSMM@0.0022195,HUVEC@0.0756345,K562@0.0045215,MCF7@0.0295865,NHEK@0,NHLF@0.000578,SKNSHRA@0.019184, 0 0 0 0 ENSG00000224107.1 ENST00000426364.1 chrX:134252881-134253674 2 386 405 intergenic 11.70 0 0,0,0 0 0,0,0 0 0 0 0 0 0 0 0 0 0 0 cat,chimp,cow,guinea_pig,horse,human,macaque,marmoset,orangutan,pig,rabbit,rat, processed_transcript processed_transcript A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000224107.1 ENST00000423661.1 chrX:134252881-134254454 3 678 891 intergenic 11.70 0 0,0,0 0 0,0,0 0 0 0 0 0 0 0 0 0 0 0 chimp,cow,horse,human,macaque,marmoset,orangutan,pig,rabbit, processed_transcript processed_transcript A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 48 3 28 3 ENSG00000223809.1 ENST00000416873.1 chrX:134257167-134257532 2 248 115 intergenic -17.53 0 0,0,0 0 0,0,0 0 0 0 0 0 0 0 0 0 0 0 cat,chimp,horse,human,macaque,marmoset,orangutan,panda,pig, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000238210.2 ENST00000427686.1 chrX:134386524-134387506 2 558 422 intergenic 11.70 1 0,1,0 0 0,0,0 0 0 0 0 0 0 0 0 0 0 0 chimp,guinea_pig,horse,human,macaque,orangutan,pig,rabbit, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 48 3 28 3 ENSG00000238210.2 ENST00000454551.1 chrX:134386740-134387531 2 386 403 intergenic 11.70 1 0,0,0 0 0,0,0 0 0 0 0 0 0 0 0 0 0 0 cat,chimp,cow,guinea_pig,horse,human,macaque,marmoset,orangutan,pig,rabbit,rat, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000229015.1 ENST00000439434.1 chrX:134530354-134531689 2 403 930 intergenic 0.58 1 0,1,0 0 0,0,0 0 0 0 0 0 0 0 0 0 0 0 chimp,cow,horse,human,macaque,marmoset,mouse,orangutan,pig,rabbit, lincRNA lincRNA A549@0.0053595,AG04450@0,BJ@0,GM12878@0,H1HESC@0.007338,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 48 3 28 3 ENSG00000178947.7 ENST00000417443.1 chrX:134555868-134559682 2 2911 901 intergenic 41.92 1 0,1,1 1 0,0,0 11.7567846100996 0 0 29.557540364136 1.06104328523862 0 37.721401580213 1.23418423973363 0 0 0 chimp,dog,horse,human,orangutan,pig, lincRNA non_coding A549@0.266363,AG04450@0.037097,BJ@0.100601,GM12878@0.026744,H1HESC@4.11727,HELAS3@0.001822,HEPG2@0,HMEC@1.17178,HSMM@0.0836935,HUVEC@0.112064,K562@0.0267155,MCF7@0.254848,NHEK@0.336199,NHLF@0.0179575,SKNSHRA@0.419178, 0 0 0 0 ENSG00000225235.1 ENST00000430820.1 chrX:134654008-134654599 2 396 193 exonic 0 0 0,0,1 0 0,0,0 352.734848484848 327.886010362694 353.25 219.318181818182 239.502590673575 224.171 249.94696969697 225.165803108808 244.606 0 0 cat,chimp,cow,dog,elephant,guinea_pig,horse,human,macaque,marmoset,mouse,orangutan,panda,pig,rabbit, antisense antisense A549@0.013928,AG04450@0.0784185,BJ@0.0246375,GM12878@0.117091,H1HESC@0.042761,HELAS3@0,HEPG2@0,HMEC@0.082304,HSMM@0.042474,HUVEC@0,K562@0.192517,MCF7@0.045807,NHEK@0.038928,NHLF@0.063188,SKNSHRA@0.0741475, 0 0 0 0 ENSG00000233093.1 ENST00000454385.1 chrX:135721702-135724585 3 683 2196 intergenic 4.78 1 0,0,0 0 0,0,0 0 0 0 25.8301610541728 0.956284153005464 0 38.5300146412884 0.956284153005464 0 0 0 cat,chimp,dog,elephant,horse,human,macaque,marmoset,mouse,orangutan,panda,rat, antisense antisense A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0.001727,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0.0132525, 0 0 0 0 ENSG00000233093.1 ENST00000429841.1 chrX:135721826-135724585 3 526 2229 intergenic 1.75 1 0,1,0 0 0,0,0 0 0 0 8.3041825095057 0.942126514131898 13.274 8.50380228136882 0.942126514131898 21.843 0 0 chimp,cow,dog,elephant,horse,human,macaque,marmoset,orangutan,panda,rabbit, antisense antisense A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0.001727,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0.0132525, 0 0 0 0 ENSG00000233093.1 ENST00000427517.1 chrX:135721899-135724588 2 1719 968 intergenic 4.78 1 0,0,0 0 0,0,0 0 0 0 0.174520069808028 2.16942148760331 17.342 0.174520069808028 2.16942148760331 26.016 0 0 chimp,elephant,horse,human,macaque,marmoset,orangutan, antisense retained_intron A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0.001727,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0.0132525, 0 0 0 0 ENSG00000232611.1 ENST00000435597.1 chrX:135923090-135929956 2 3016 3848 intergenic -2.25 0 0,1,0 0 0,0,0 0 0 0 27.2350795755968 0 30.894 78.7937665782493 0 140.719 0 0 chimp,human,macaque,orangutan, lincRNA lincRNA A549@0.488658,AG04450@0.307294,BJ@0.197162,GM12878@0.31656,H1HESC@0.418155,HELAS3@0.257226,HEPG2@0.232641,HMEC@0.071907,HSMM@0.320866,HUVEC@0.44094,K562@1.34239,MCF7@0.32887,NHEK@0.150697,NHLF@0.136148,SKNSHRA@1.01493, 0 0 0 0 ENSG00000234062.3 ENST00000424306.1 chrX:135991554-136075814 4 2218 82036 intergenic 12.58 0 1,1,1 1 0,0,0 0 2.92432590569994 0 0 8.70469062362865 2.232 26.1726780883679 26.3722390170169 2.187 0 0 chimp,human,orangutan, processed_transcript processed_transcript A549@0.643329,AG04450@0.053446,BJ@0.0499815,GM12878@0.161748,H1HESC@0.297563,HELAS3@0.329883,HEPG2@0.253428,HMEC@0.058656,HSMM@0.0286825,HUVEC@0.155818,K562@0.50237,MCF7@0.5868,NHEK@0.0698217,NHLF@0.027033,SKNSHRA@0.288898, 0 0 0 0 ENSG00000234062.3 ENST00000431464.1 chrX:135991634-136103777 3 643 111496 intergenic 0.12 0 1,1,1 1 0,0,0 0 3.98630444141494 0 0 7.38657889072254 2.232 50.4401244167963 22.8786682930329 2.187 0 0 chimp,cow,dog,elephant,guinea_pig,horse,human,macaque,marmoset,opossum,orangutan,panda, processed_transcript processed_transcript A549@0.643329,AG04450@0.053446,BJ@0.0499815,GM12878@0.161748,H1HESC@0.297563,HELAS3@0.329883,HEPG2@0.253428,HMEC@0.058656,HSMM@0.0286825,HUVEC@0.155818,K562@0.50237,MCF7@0.5868,NHEK@0.0698217,NHLF@0.027033,SKNSHRA@0.288898, 0 0 0 0 ENSG00000234062.3 ENST00000438602.1 chrX:136075646-136103789 4 578 27559 intergenic -16.23 0 0,1,1 0 0,0,0 0 7.42251170216626 0 0 3.97242280198846 0 233.192041522491 10.2702202547262 72.442 0 0 cat,chimp,cow,dog,elephant,guinea_pig,horse,human,macaque,marmoset,mouse,opossum,orangutan,panda,pig,platypus,rabbit,rat, processed_transcript processed_transcript A549@0.643329,AG04450@0.053446,BJ@0.0499815,GM12878@0.161748,H1HESC@0.297563,HELAS3@0.329883,HEPG2@0.253428,HMEC@0.058656,HSMM@0.0286825,HUVEC@0.155818,K562@0.50237,MCF7@0.5868,NHEK@0.0698217,NHLF@0.027033,SKNSHRA@0.288898, 0 0 0 0 ENSG00000234062.3 ENST00000440604.1 chrX:136075713-136103777 5 724 27332 intergenic -0.78 0 0,0,1 0 0,0,0 19.1685082872928 6.96699839016537 0 27.3301104972376 3.26225669544856 0 327.084254143646 5.56896677886726 98.97 0 0 cat,chimp,cow,dog,elephant,guinea_pig,horse,human,macaque,marmoset,mouse,opossum,orangutan,panda,pig,platypus,rabbit,rat, processed_transcript processed_transcript A549@0.643329,AG04450@0.053446,BJ@0.0499815,GM12878@0.161748,H1HESC@0.297563,HELAS3@0.329883,HEPG2@0.253428,HMEC@0.058656,HSMM@0.0286825,HUVEC@0.155818,K562@0.50237,MCF7@0.5868,NHEK@0.0698217,NHLF@0.027033,SKNSHRA@0.288898, 0 0 0 0 ENSG00000224765.1 ENST00000456631.1 chrX:136638350-136646084 3 301 7429 intergenic 2.12 1 0,0,0 0 0,0,0 0 70.0332480818414 155.964 7.41528239202658 71.4280522277561 139.126 7.74418604651163 63.85300848028 252.785 0 0 cat,chimp,cow,dog,guinea_pig,horse,human,macaque,orangutan,panda,pig, antisense antisense A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0.137643,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0.0380505,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000224765.1 ENST00000442841.1 chrX:136642828-136646546 2 584 3132 intergenic 0 1 0,0,0 0 0,0,0 42.1917808219178 147.617816091954 101.22 48.027397260274 150.077266922095 79.842 51.4571917808219 136.072158365262 184.058 0 0 cat,chimp,cow,dog,elephant,horse,human,macaque,mouse,orangutan,panda,pig,rabbit,rat, antisense antisense A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0.137643,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0.0380505,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000232183.1 ENST00000411940.1 chrX:137709238-137709504 2 140 124 intergenic 0 0 0,0,0 0 0,0,0 0 0 0 0 19.2741935483871 0 0 62.991935483871 0 0 0 cat,chimp,dog,elephant,horse,human,macaque,marmoset,orangutan, antisense antisense A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000226031.1 ENST00000446383.1 chrX:137793614-137798254 4 580 4054 exonic -1.48 0 0,1,0 0 0,0,0 151.737931034483 20.1245683275777 317.152 161.55 21.4459792797237 311.553 129.013793103448 20.3529847064628 294.735 0 0 chimp,cow,horse,human,macaque,marmoset,orangutan,rabbit, lincRNA processed_transcript A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0.383622,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0.004847,HUVEC@0,K562@0,MCF7@0.0192125,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000226031.1 ENST00000438238.1 chrX:137794269-137798779 3 846 3660 intronic -1.48 0 0,0,1 0 0,0,0 59.7553191489362 13.9653005464481 189.044 66.8191489361702 15.7661202185792 204.159 63.1146572104019 15.6614754098361 162.477 0 0 chimp,cow,guinea_pig,human,macaque,marmoset,orangutan,panda,pig,rabbit,rat, lincRNA processed_transcript A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0.383622,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0.004847,HUVEC@0,K562@0,MCF7@0.0192125,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000233145.1 ENST00000417426.1 chrX:139099427-139100196 2 580 187 intergenic 2.28 0 0,0,0 0 0,0,0 0 0 0 0 0 0 0 0 0 0 0 cat,chimp,dog,elephant,horse,human,macaque,marmoset,mouse,orangutan,panda, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000231110.1 ENST00000458577.1 chrX:139298187-139298956 2 580 187 intergenic 3.03 0 0,0,0 0 0,0,0 0 0 0 0 0 0 0 0 0 0 0 cat,chimp,dog,elephant,horse,human,macaque,marmoset,mouse,orangutan,panda, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000230668.1 ENST00000455153.1 chrX:139763271-139769870 3 320 6275 intergenic 0.40 1 0,0,0 0 0,0,0 0 0 0 0 0 0 4.55625 54.1760956175299 0.729 0 0 cat,chimp,dog,horse,human,macaque,marmoset,orangutan,panda,pig,rabbit, antisense antisense A549@0.00672,AG04450@0,BJ@0,GM12878@0.0435415,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0.0315455,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000229269.1 ENST00000413328.1 chrX:140013903-140079613 3 214 65492 intergenic -0.71 0 0,0,0 0 0,0,0 0 5.99500702375863 0 0 11.7413271849997 0 0 13.5296677456789 0 0 0 human,macaque,marmoset, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000226574.1 ENST00000421554.1 chrX:140590843-140738057 4 1697 145511 encompassing 35.21 0 0,0,1 0 0,0,0 0 0.377455999890043 0 10.0766057748969 4.11569572059844 0 12.142015321155 5.03889053061281 0 0 0 chimp,guinea_pig,human,macaque,marmoset,orangutan, processed_transcript processed_transcript A549@0,AG04450@0.121138,BJ@0.016525,GM12878@0,H1HESC@0.009098,HELAS3@0.0054505,HEPG2@0.003207,HMEC@0.008761,HSMM@0.012616,HUVEC@0.0282225,K562@0.001365,MCF7@0.0218935,NHEK@0.015221,NHLF@0.0616755,SKNSHRA@0.092348, 0 0 0 0 ENSG00000223438.1 ENST00000412163.1 chrX:140713994-140714863 2 679 188 intergenic 4.84 1 0,0,0 0 0,0,0 0 0 0 0 0 5.258 0 0 5.346 0 0 chimp,horse,human,macaque,marmoset,orangutan, lincRNA lincRNA A549@0.0036105,AG04450@0.0012545,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0.008181,HSMM@0,HUVEC@0,K562@0,MCF7@0.003618,NHEK@0,NHLF@0,SKNSHRA@0.0106215, 0 0 0 0 ENSG00000227303.1 ENST00000431432.1 chrX:142372754-142604631 6 617 231250 intronic 3.75 0 0,0,1 0 0,0,0 0 1.71953297297297 0 0 6.0060627027027 0 0 15.0312648648649 0 0 0 human,macaque, processed_transcript processed_transcript A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000225970.1 ENST00000423667.1 chrX:142840832-142911228 3 315 70077 intergenic -1.44 0 0,0,0 0 0,0,0 0 0.889878276752715 0 0 3.78749090286399 0 0 7.27596786392112 0 0 0 chimp,human,macaque,marmoset,orangutan, processed_transcript processed_transcript A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000234712.1 ENST00000414071.1 chrX:144314449-144315139 2 376 312 intergenic -5.56 0 0,1,0 0 0,0,0 0 0 0 0 0 0 0 0 0 0 0 chimp,dog,human,macaque,marmoset,orangutan,rabbit, antisense antisense A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000235699.2 ENST00000438525.2 chrX:145891302-145891927 2 434 189 intergenic 14.83 1 0,1,0 0 0,0,1 0 0 0 0 0 0 0 0 0 0 0 cat,chimp,horse,human,macaque,marmoset,orangutan, lincRNA lincRNA A549@0.009957,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 172 2 112 2 ENSG00000224440.1 ENST00000458472.1 chrX:145895624-145896244 2 429 189 intergenic 14.83 1 0,0,1 0 0,0,0 0 0 0 0 0 2.868 0 0 2.916 0 0 cat,chimp,horse,human,macaque,marmoset,orangutan, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 172 2 112 2 ENSG00000227083.1 ENST00000456072.1 chrX:146981696-146982977 2 532 747 intergenic -6.16 0 0,1,0 0 0,0,0 0 0 0 0 0 0 0 0 0 0 0 cat,chimp,cow,dog,elephant,human,macaque,marmoset,orangutan,panda,pig, antisense antisense A549@0.0846815,AG04450@0.019908,BJ@0,GM12878@0.0608385,H1HESC@0.0937655,HELAS3@0.110195,HEPG2@0.04448,HMEC@0.038339,HSMM@0,HUVEC@0.0045535,K562@0.113806,MCF7@0.0227605,NHEK@0.031605,NHLF@0,SKNSHRA@0.0614445, 0 0 0 0 ENSG00000224191.2 ENST00000545310.1 chrX:146990949-146993335 2 1739 645 intergenic 1.00 0 0,1,0 0 0,1,0 0 0 130.812 8.27372052903968 0 204.899 7.92754456584244 0 205.25 0 0 chimp,cow,dog,guinea_pig,human,macaque,marmoset,orangutan,panda,pig,rabbit, lincRNA lincRNA A549@0.0254995,AG04450@0.010729,BJ@0.002828,GM12878@0.0363055,H1HESC@0.0774605,HELAS3@0.105266,HEPG2@0.0426475,HMEC@0.002352,HSMM@0.013255,HUVEC@0.0138045,K562@0.0374215,MCF7@0.0220985,NHEK@0.011187,NHLF@0.0011085,SKNSHRA@0.0292225, 0 0 0 0 ENSG00000224191.2 ENST00000433064.1 chrX:146990949-147003676 4 2480 10241 exonic 40.88 0 0,1,0 0 0,1,0 33.4540322580645 9.12088663216483 0 91.0979838709678 5.85470168928816 0 93.8463709677419 4.88672981154184 0 0 0 chimp,dog,human,macaque,marmoset,panda, lincRNA lincRNA A549@0.0254995,AG04450@0.010729,BJ@0.002828,GM12878@0.0363055,H1HESC@0.0774605,HELAS3@0.105266,HEPG2@0.0426475,HMEC@0.002352,HSMM@0.013255,HUVEC@0.0138045,K562@0.0374215,MCF7@0.0220985,NHEK@0.011187,NHLF@0.0011085,SKNSHRA@0.0292225, 0 0 0 0 ENSG00000236337.1 ENST00000441414.1 chrX:147028461-147029103 2 341 299 intronic -3.66 0 0,0,0 0 0,0,0 0 0 0 0 0 0 0 0 0 0 0 human,macaque,orangutan, sense_intronic sense_intronic A549@0.089731,AG04450@0,BJ@0.01059,GM12878@0.142309,H1HESC@0.009053,HELAS3@0.0800635,HEPG2@0.158095,HMEC@0,HSMM@0,HUVEC@0,K562@0.122284,MCF7@0,NHEK@0.0460257,NHLF@0,SKNSHRA@0.0617815, 0 0 0 0 ENSG00000237741.1 ENST00000456981.1 chrX:147579633-147582135 2 386 2114 intergenic 1.98 0 0,1,0 0 0,0,0 206.025906735751 15.6754966887417 34.12 276.238341968912 33.0368968779565 86.499 270.637305699482 25.1338694418165 70.588 0 0 chimp,cow,dog,elephant,guinea_pig,horse,human,macaque,marmoset,mouse,orangutan,panda,pig,rabbit,rat, antisense antisense A549@0,AG04450@0,BJ@0.0184425,GM12878@0,H1HESC@0.0128475,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000223516.1 ENST00000435346.1 chrX:147628399-147628918 2 441 76 intronic 0.56 0 0,0,0 0 0,0,0 0 0 0 10.734693877551 0 7.434 10.8163265306122 0 25.216 0 0 elephant,guinea_pig,horse,human,macaque,orangutan, sense_intronic sense_intronic A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0.063942,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000241769.2 ENST00000431214.1 chrX:148615632-148620837 5 784 4413 intergenic 8.24 0 0,1,0 0 0,0,0 0 0 0 0 0 0 0 0 0 0 0 chimp,human,macaque,marmoset,orangutan, processed_transcript processed_transcript A549@3.75448,AG04450@1.31923,BJ@2.42974,GM12878@1.67673,H1HESC@1.18186,HELAS3@1.53951,HEPG2@2.10855,HMEC@0.603319,HSMM@1.05464,HUVEC@1.36483,K562@1.34299,MCF7@2.19354,NHEK@1.60318,NHLF@0.644556,SKNSHRA@3.70466, 0 0 0 0 ENSG00000241769.2 ENST00000436708.1 chrX:148615765-148622358 4 498 6089 exonic 6.89 0 0,1,0 1 0,0,0 0 0 0 0 0 0 0 0 0 0 0 chimp,human,macaque,marmoset,orangutan, processed_transcript processed_transcript A549@3.75448,AG04450@1.31923,BJ@2.42974,GM12878@1.67673,H1HESC@1.18186,HELAS3@1.53951,HEPG2@2.10855,HMEC@0.603319,HSMM@1.05464,HUVEC@1.36483,K562@1.34299,MCF7@2.19354,NHEK@1.60318,NHLF@0.644556,SKNSHRA@3.70466, 0 0 0 0 ENSG00000225261.1 ENST00000431993.1 chrX:148629755-148631380 2 1165 458 exonic 27.14 1 0,0,0 0 0,0,0 0 0 0 0 0 0 2.46437768240343 2.12227074235808 0 0 0 chimp,cow,dog,horse,human,macaque,marmoset,orangutan,panda,rabbit, antisense antisense A549@0,AG04450@0,BJ@0,GM12878@0.051337,H1HESC@0.0071105,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0.012342,HUVEC@0,K562@0.0250255,MCF7@0.010571,NHEK@0,NHLF@0,SKNSHRA@0, 104 2 59 2 ENSG00000230899.1 ENST00000427671.1 chrX:149007636-149009870 5 471 1755 intergenic -2.95 0 1,1,1 0 0,0,0 0 0 0 0 0 0 0 7.27521367521368 0 0 0 chimp,horse,human,macaque,orangutan,pig, antisense antisense A549@0,AG04450@0.0094175,BJ@0,GM12878@0,H1HESC@0,HELAS3@0.00982,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0.281064,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0.0238575, 0 0 0 0 ENSG00000224871.1 ENST00000457775.1 chrX:149097880-149098916 2 576 458 exonic 0.85 0 0,0,0 0 0,0,0 0 0 0 4.83333333333333 6.49781659388646 0 9.421875 7.57205240174673 0 0 0 cat,chimp,cow,dog,elephant,guinea_pig,horse,human,macaque,marmoset,orangutan,panda,pig,rabbit, antisense antisense A549@0,AG04450@0,BJ@0,GM12878@0.057708,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0.025687,HUVEC@0,K562@0.0084985,MCF7@0.021028,NHEK@0,NHLF@0,SKNSHRA@0, 104 2 59 2 ENSG00000235703.1 ENST00000449111.1 chrX:149106846-149392815 15 3399 282542 exonic 10.87 1 0,1,0 1 0,0,0 1.55634010002942 6.88329522690432 0 0.225066195939982 9.09023437223492 0 1.10532509561636 11.4172335440395 0 0 0 chimp,human,marmoset,orangutan, lincRNA processed_transcript A549@4.44364,AG04450@0.716301,BJ@1.75584,GM12878@1.76346,H1HESC@0.996841,HELAS3@2.3411,HEPG2@2.55073,HMEC@0.540697,HSMM@0.626702,HUVEC@2.01952,K562@1.6458,MCF7@2.82439,NHEK@1.27809,NHLF@0.431192,SKNSHRA@4.10691, 0 0 0 0 ENSG00000235703.1 ENST00000458274.1 chrX:149107957-149109050 2 545 546 intergenic 4.03 0 0,1,0 0 0,0,0 0 0 0 0 0 0 0 8.53846153846154 4.98 0 0 chimp,human,marmoset,orangutan, lincRNA processed_transcript A549@4.44364,AG04450@0.716301,BJ@1.75584,GM12878@1.76346,H1HESC@0.996841,HELAS3@2.3411,HEPG2@2.55073,HMEC@0.540697,HSMM@0.626702,HUVEC@2.01952,K562@1.6458,MCF7@2.82439,NHEK@1.27809,NHLF@0.431192,SKNSHRA@4.10691, 0 0 0 0 ENSG00000235703.1 ENST00000444489.1 chrX:149108374-149185018 12 2939 73683 intergenic 10.54 1 0,1,1 0 0,0,0 35.6073494385845 10.8958375744744 0 36.2824089826472 12.6718374659012 0 37.4334807757741 12.2858189813118 1.215 0 0 chimp,human,marmoset,orangutan, lincRNA processed_transcript A549@4.44364,AG04450@0.716301,BJ@1.75584,GM12878@1.76346,H1HESC@0.996841,HELAS3@2.3411,HEPG2@2.55073,HMEC@0.540697,HSMM@0.626702,HUVEC@2.01952,K562@1.6458,MCF7@2.82439,NHEK@1.27809,NHLF@0.431192,SKNSHRA@4.10691, 0 0 0 0 ENSG00000235703.1 ENST00000450989.1 chrX:149113851-149121124 3 2358 4911 intergenic 6.25 0 0,0,1 0 0,0,0 0 0 0 0 0 0 0 0 0 0 0 chimp,human,macaque,marmoset,orangutan, lincRNA processed_transcript A549@4.44364,AG04450@0.716301,BJ@1.75584,GM12878@1.76346,H1HESC@0.996841,HELAS3@2.3411,HEPG2@2.55073,HMEC@0.540697,HSMM@0.626702,HUVEC@2.01952,K562@1.6458,MCF7@2.82439,NHEK@1.27809,NHLF@0.431192,SKNSHRA@4.10691, 0 0 0 0 ENSG00000235703.1 ENST00000452864.1 chrX:149114194-149115156 2 748 212 intergenic -3.68 0 0,1,0 0 0,0,0 0 0 0 0 0 0 0 0 0 0 0 NA lincRNA processed_transcript A549@4.44364,AG04450@0.716301,BJ@1.75584,GM12878@1.76346,H1HESC@0.996841,HELAS3@2.3411,HEPG2@2.55073,HMEC@0.540697,HSMM@0.626702,HUVEC@2.01952,K562@1.6458,MCF7@2.82439,NHEK@1.27809,NHLF@0.431192,SKNSHRA@4.10691, 0 0 0 0 ENSG00000235703.1 ENST00000432696.1 chrX:149114564-149115435 2 296 573 intergenic 0 0 0,0,1 0 0,0,0 0 0 0 0 0 0 0 0 0 0 0 chimp,human,macaque,orangutan, lincRNA processed_transcript A549@4.44364,AG04450@0.716301,BJ@1.75584,GM12878@1.76346,H1HESC@0.996841,HELAS3@2.3411,HEPG2@2.55073,HMEC@0.540697,HSMM@0.626702,HUVEC@2.01952,K562@1.6458,MCF7@2.82439,NHEK@1.27809,NHLF@0.431192,SKNSHRA@4.10691, 0 0 0 0 ENSG00000235703.1 ENST00000425602.1 chrX:149115589-149121270 3 1594 4083 intergenic -4.06 0 0,1,0 0 0,0,0 0 0 0 0 0 0 0 0 0 0 0 chimp,human,macaque,marmoset,orangutan, lincRNA processed_transcript A549@4.44364,AG04450@0.716301,BJ@1.75584,GM12878@1.76346,H1HESC@0.996841,HELAS3@2.3411,HEPG2@2.55073,HMEC@0.540697,HSMM@0.626702,HUVEC@2.01952,K562@1.6458,MCF7@2.82439,NHEK@1.27809,NHLF@0.431192,SKNSHRA@4.10691, 0 0 0 0 ENSG00000235703.1 ENST00000455777.1 chrX:149129100-149131017 2 282 1633 intergenic -7.75 1 0,1,0 0 0,0,0 0 0 10.12 0 0 5.355 0 0 12.158 0 0 cat,chimp,elephant,horse,human,macaque,marmoset,mouse,orangutan,panda,pig,rabbit, lincRNA processed_transcript A549@4.44364,AG04450@0.716301,BJ@1.75584,GM12878@1.76346,H1HESC@0.996841,HELAS3@2.3411,HEPG2@2.55073,HMEC@0.540697,HSMM@0.626702,HUVEC@2.01952,K562@1.6458,MCF7@2.82439,NHEK@1.27809,NHLF@0.431192,SKNSHRA@4.10691, 0 0 0 0 ENSG00000235703.1 ENST00000413076.1 chrX:149184313-149185875 4 399 1157 intergenic -2.73 0 0,1,1 0 0,0,0 225.964912280702 65.2031114952463 19.09 198.724310776942 74.2445980985307 52.61 197.027568922306 81.9878997407087 43.63 0 0 cat,chimp,dog,elephant,guinea_pig,horse,human,macaque,marmoset,orangutan,rabbit, lincRNA processed_transcript A549@4.44364,AG04450@0.716301,BJ@1.75584,GM12878@1.76346,H1HESC@0.996841,HELAS3@2.3411,HEPG2@2.55073,HMEC@0.540697,HSMM@0.626702,HUVEC@2.01952,K562@1.6458,MCF7@2.82439,NHEK@1.27809,NHLF@0.431192,SKNSHRA@4.10691, 0 0 0 0 ENSG00000230153.1 ENST00000437772.1 chrX:150084286-150089411 4 516 4603 intergenic 0.08 1 0,0,0 0 0,0,0 145.674418604651 45.1601129698023 0 0 2.37106235064089 0 0 3.43862698240278 0 0 0 chimp,horse,human,macaque,orangutan,pig, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000230153.1 ENST00000424539.1 chrX:150085636-150089411 3 439 3332 intergenic 0.08 1 0,1,0 0 0,0,0 166.997722095672 62.9435774309724 0 0 3.27551020408163 0 0 4.75030012004802 0 0 0 chimp,horse,human,macaque,orangutan,panda,pig, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000234696.1 ENST00000454196.1 chrX:150343664-150346308 3 1617 1023 exonic 8.19 0 0,1,0 0 0,0,0 0 0 0 34.6345083487941 48.0830889540567 7.974 32.7668521954236 48.1026392961877 8.027 0 0 dog,guinea_pig,horse,human,marmoset,orangutan,panda,rabbit, antisense antisense A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0.105853,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000214915.3 ENST00000454307.1 chrX:150684023-150684717 2 480 212 intergenic 6.31 0 1,1,1 0 0,0,0 0 0 0 0 0 0 0 0 0 0 0 chimp,dog,human,macaque,marmoset,orangutan,panda,pig, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0.008608,HELAS3@0.0375025,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0.0208555,NHEK@0,NHLF@0,SKNSHRA@0, 43 3 25 3 ENSG00000229967.1 ENST00000411474.1 chrX:151072903-151079927 3 847 6173 intergenic 0.20 1 0,0,1 0 0,0,0 0 0 0 0 0 0 0 0 0 0 0 chimp,human,macaque,orangutan, antisense antisense A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0.0207905,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0.031428,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0.007625, 0 0 0 0 ENSG00000229967.1 ENST00000445330.1 chrX:151072904-151079671 2 533 6232 intergenic 0.20 1 0,0,1 0 0,0,0 0 0 0 0 0 0 0 0 0 0 0 chimp,dog,horse,human,macaque,marmoset,orangutan,panda,pig, antisense antisense A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0.0207905,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0.031428,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0.007625, 0 0 0 0 ENSG00000229967.1 ENST00000424126.1 chrX:151077925-151082440 5 795 3712 exonic 3.79 0 0,0,0 0 0,0,0 0 0 0 0 0 0 0 0 0 0 0 chimp,human,macaque,marmoset,orangutan, antisense antisense A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0.0207905,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0.031428,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0.007625, 0 0 0 0 ENSG00000231937.1 ENST00000453915.1 chrX:151307355-151355329 4 547 47421 intronic 0.91 0 0,0,1 0 0,0,0 0 11.3425064844689 0 0 9.72992977794648 0 0 9.98871807848843 0 0 0 chimp,human,marmoset, antisense antisense A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0.038533,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0.085575,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0.573332, 0 0 0 0 ENSG00000197463.8 ENST00000356911.4 chrX:151876743-151877747 2 845 157 intergenic 1.09 1 0,0,1 0 0,1,1 0 0 0 0 0 0 0 0 0 0 1 chimp,human,macaque,orangutan, antisense antisense A549@0.0082535,AG04450@0.0180995,BJ@0,GM12878@0.447739,H1HESC@0.0558005,HELAS3@0.0082915,HEPG2@0.0216445,HMEC@0,HSMM@0,HUVEC@0,K562@6.99325,MCF7@0.0023735,NHEK@0,NHLF@0,SKNSHRA@13.9391, 43 3 25 3 ENSG00000197463.8 ENST00000415810.1 chrX:151876743-151883038 5 784 5503 intergenic 2.24 1 0,1,1 0 0,1,1 0 0 0 0 0 0 0 0 0 0 0 chimp,dog,horse,human,macaque,marmoset,orangutan, antisense antisense A549@0.0082535,AG04450@0.0180995,BJ@0,GM12878@0.447739,H1HESC@0.0558005,HELAS3@0.0082915,HEPG2@0.0216445,HMEC@0,HSMM@0,HUVEC@0,K562@6.99325,MCF7@0.0023735,NHEK@0,NHLF@0,SKNSHRA@13.9391, 0 0 0 0 ENSG00000231447.1 ENST00000437309.1 chrX:151889195-151890140 2 846 97 intergenic 0.99 0 0,0,0 0 0,0,0 0 0 0 0 0 0 0 0 0 0 0 cat,chimp,cow,dog,horse,human,macaque,marmoset,orangutan,panda,pig, antisense antisense A549@0.0214055,AG04450@0,BJ@0,GM12878@0.0047545,H1HESC@0.003432,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0.121273,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0.222427, 0 0 0 0 ENSG00000242599.2 ENST00000535353.1 chrX:151896280-151896711 2 220 209 intergenic 0 0 0,0,0 0 0,0,0 0 0 0 0 0 0 0 0 0 1 1 chimp,human,macaque,marmoset,orangutan, processed_transcript processed_transcript A549@0.039559,AG04450@0,BJ@0,GM12878@0.076393,H1HESC@0.022293,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0.597523,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0.184822, 0 0 0 0 ENSG00000184324.11 ENST00000370292.3 chrX:151922445-151928738 5 784 5501 intergenic 2.24 1 0,1,1 0 0,1,0 0 0 0 0 0 0 0 0 0 0 0 chimp,dog,horse,human,macaque,marmoset,orangutan, antisense antisense A549@0.0082535,AG04450@0.0142925,BJ@0,GM12878@0.384305,H1HESC@0.0476375,HELAS3@0.0082915,HEPG2@0.01443,HMEC@0,HSMM@0,HUVEC@0.0088595,K562@6.36829,MCF7@0.0023735,NHEK@0,NHLF@0,SKNSHRA@12.5544, 0 0 0 0 ENSG00000184324.11 ENST00000439173.1 chrX:151927734-151928738 2 845 157 intergenic 1.09 1 0,0,1 0 0,1,0 0 0 0 0 0 0 0 0 0 0 1 chimp,human,macaque,orangutan, antisense antisense A549@0.0082535,AG04450@0.0142925,BJ@0,GM12878@0.384305,H1HESC@0.0476375,HELAS3@0.0082915,HEPG2@0.01443,HMEC@0,HSMM@0,HUVEC@0.0088595,K562@6.36829,MCF7@0.0023735,NHEK@0,NHLF@0,SKNSHRA@12.5544, 43 3 25 3 ENSG00000237736.1 ENST00000420160.1 chrX:152435330-152439727 4 917 3474 intergenic 0.48 0 0,0,0 0 0,0,0 0 0 0 0 0 0 0 55.10103626943 0 0 0 chimp,human,orangutan, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0.0149035,MCF7@0,NHEK@0.00554433,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000237736.1 ENST00000420988.1 chrX:152435672-152439737 4 539 3520 intergenic 2.18 0 0,0,0 0 0,0,0 0 0 0 0 0 0 0 54.3809659090909 0 0 0 chimp,human,orangutan, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0.0149035,MCF7@0,NHEK@0.00554433,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000228616.1 ENST00000446370.1 chrX:152876149-152878380 2 615 1614 intergenic -0.43 1 0,1,0 0 0,0,0 11.8048780487805 0 19.08 27.5284552845528 3.21251548946716 53.095 27.3333333333333 4.08116480793061 57.232 0 0 horse,human,macaque,marmoset,orangutan,rat, lincRNA lincRNA A549@0,AG04450@0,BJ@0.0079805,GM12878@0,H1HESC@0,HELAS3@0.0270605,HEPG2@0.0664795,HMEC@0,HSMM@0.003335,HUVEC@0,K562@0,MCF7@0.012204,NHEK@0,NHLF@0,SKNSHRA@0.0219445, 0 0 0 0 ENSG00000232725.1 ENST00000434284.1 chrX:153001080-153031908 3 911 29913 intronic 2.17 0 0,1,0 1 0,0,0 0 4.86540968809548 24.569 0 16.7352321733026 106.95 0 22.6609500885902 132.041 0 0 chimp,human,macaque,marmoset,orangutan, antisense antisense A549@0.002375,AG04450@0,BJ@0.059747,GM12878@0,H1HESC@0.0032515,HELAS3@0.002472,HEPG2@0,HMEC@0,HSMM@0.0069965,HUVEC@0,K562@0.192487,MCF7@0,NHEK@0.00433033,NHLF@0.0174265,SKNSHRA@0.0904665, 0 0 0 0 ENSG00000232725.1 ENST00000416854.1 chrX:153025945-153031933 3 241 5743 intronic 0 0 0,1,0 1 0,0,0 0 4.19293052411632 32.344 0 21.6233675779209 118.6 0 15.6799582099948 141.225 0 0 chimp,human,macaque,marmoset,orangutan, antisense antisense A549@0.002375,AG04450@0,BJ@0.059747,GM12878@0,H1HESC@0.0032515,HELAS3@0.002472,HEPG2@0,HMEC@0,HSMM@0.0069965,HUVEC@0,K562@0.192487,MCF7@0,NHEK@0.00433033,NHLF@0.0174265,SKNSHRA@0.0904665, 0 0 0 0 ENSG00000235802.1 ENST00000438219.1 chrX:153234776-153235538 2 348 412 intronic 0 0 0,0,1 0 0,0,0 0 0 40.946 0 0 27.171 0 0 24.777 0 0 chimp,human,macaque,marmoset,orangutan, antisense antisense A549@0,AG04450@0,BJ@0,GM12878@0.130324,H1HESC@0,HELAS3@0,HEPG2@0.015587,HMEC@0,HSMM@0,HUVEC@0,K562@0.006634,MCF7@0,NHEK@0,NHLF@0.005575,SKNSHRA@0, 0 0 0 0 ENSG00000231830.1 ENST00000433825.1 chrX:153562310-153563387 2 339 736 intergenic 5.30 1 0,0,0 0 0,0,0 0 0 0 0 0 0 0 0 0 0 0 chimp,human,macaque,marmoset,orangutan, antisense antisense A549@0.168982,AG04450@0.0740995,BJ@0.057859,GM12878@0.056373,H1HESC@0,HELAS3@0.277681,HEPG2@0.183982,HMEC@0.012008,HSMM@0,HUVEC@0.0071305,K562@0.211023,MCF7@0.089908,NHEK@0.0303323,NHLF@0,SKNSHRA@0.45299, 0 0 0 0 ENSG00000224216.1 ENST00000444722.1 chrX:154564167-154581240 2 457 16614 intergenic 0 0 0,0,0 0 0,0,0 0 4.70530877573131 0 71.035010940919 7.36294691224269 0 75.7571115973742 12.1746117732033 0 0 0 cat,cow,dog,elephant,guinea_pig,horse,human,macaque,marmoset,orangutan,panda,pig,rabbit,rat, antisense antisense A549@0.180355,AG04450@0.133575,BJ@0.0351545,GM12878@0.114036,H1HESC@0.082696,HELAS3@0.164604,HEPG2@0.076946,HMEC@0.003081,HSMM@0.0175315,HUVEC@0.100129,K562@0.128293,MCF7@0.286691,NHEK@0.032594,NHLF@0.0365085,SKNSHRA@0.339906, 0 0 0 0 ENSG00000224216.1 ENST00000412436.1 chrX:154576450-154581271 2 1327 3492 intergenic -5.89 1 0,0,0 0 0,0,0 0 22.3865979381443 0 0 35.0309278350515 0 0 43.1815578465063 0 0 0 chimp,elephant,horse,human,marmoset,orangutan,rabbit, antisense antisense A549@0.180355,AG04450@0.133575,BJ@0.0351545,GM12878@0.114036,H1HESC@0.082696,HELAS3@0.164604,HEPG2@0.076946,HMEC@0.003081,HSMM@0.0175315,HUVEC@0.100129,K562@0.128293,MCF7@0.286691,NHEK@0.032594,NHLF@0.0365085,SKNSHRA@0.339906, 88 2 0 0 ENSG00000230578.2 ENST00000453508.1 chrX:154578072-154579111 2 424 613 intergenic 1.97 1 0,0,0 0 0,0,0 97.1155660377359 1.55954323001631 35.496 261.882075471698 10.1696574225122 4.13 325.346698113208 11.0701468189233 4.96 0 0 cat,chimp,cow,dog,elephant,guinea_pig,horse,human,macaque,marmoset,opossum,orangutan,panda,pig,rat, processed_transcript processed_transcript A549@0.507232,AG04450@1.03177,BJ@0.215798,GM12878@0.526527,H1HESC@0.37964,HELAS3@0.405608,HEPG2@0.391258,HMEC@0.451754,HSMM@0.144603,HUVEC@0.352935,K562@0.379922,MCF7@0.290455,NHEK@0.934604,NHLF@0.184412,SKNSHRA@0.485042, 0 0 0 0 ENSG00000224533.3 ENST00000541151.1 chrX:154695631-154697321 1 1690 0 intergenic -2.52 0 0,0,0 0 0,0,0 0 0 0 11.1396449704142 0 0 11.2940828402367 0 0 0 0 chimp,horse,human,macaque,marmoset,orangutan, antisense antisense A549@0.180484,AG04450@0.106951,BJ@0.042708,GM12878@0.14852,H1HESC@0.189348,HELAS3@0.186688,HEPG2@0.140303,HMEC@0.007225,HSMM@0.014073,HUVEC@0.163018,K562@0.111422,MCF7@0.271328,NHEK@0.0308933,NHLF@0.0273845,SKNSHRA@0.327775, 0 0 0 0 ENSG00000224533.3 ENST00000433624.1 chrX:154696201-154723771 4 1698 25866 intronic -5.89 1 0,0,0 0 0,0,0 29.9681978798587 6.0666898631408 0 10.1018845700825 8.64463001623753 7.17 10.3474676089517 10.8474831825563 7.29 0 0 chimp,elephant,human,marmoset,orangutan, antisense antisense A549@0.180484,AG04450@0.106951,BJ@0.042708,GM12878@0.14852,H1HESC@0.189348,HELAS3@0.186688,HEPG2@0.140303,HMEC@0.007225,HSMM@0.014073,HUVEC@0.163018,K562@0.111422,MCF7@0.271328,NHEK@0.0308933,NHLF@0.0273845,SKNSHRA@0.327775, 88 2 0 0 ENSG00000225393.1 ENST00000447347.1 chrX:154697947-154716707 2 551 18207 intergenic 3.74 0 0,0,1 0 0,0,0 16.049001814882 0 0 17.6606170598911 2.57236227824463 0 17.7949183303085 3.82105783489867 0 0 0 chimp,human,macaque,orangutan, antisense antisense A549@0.064303,AG04450@0.081708,BJ@0.0556615,GM12878@0.027976,H1HESC@0.0354935,HELAS3@0.358807,HEPG2@0.41467,HMEC@0,HSMM@0.0176725,HUVEC@0.043258,K562@0.0167445,MCF7@0.328567,NHEK@0.0150597,NHLF@0,SKNSHRA@0.055105, 0 0 0 0 ENSG00000224533.3 ENST00000452506.1 chrX:154718984-154841277 2 208 122083 intronic 0 0 0,1,0 0 0,0,0 0 5.64256284658798 0 13.2692307692308 8.20973436104945 0 13.3653846153846 10.332118312951 0 0 0 cat,chimp,elephant,horse,human,macaque,marmoset,orangutan,panda, antisense antisense A549@0.180484,AG04450@0.106951,BJ@0.042708,GM12878@0.14852,H1HESC@0.189348,HELAS3@0.186688,HEPG2@0.140303,HMEC@0.007225,HSMM@0.014073,HUVEC@0.163018,K562@0.111422,MCF7@0.271328,NHEK@0.0308933,NHLF@0.0273845,SKNSHRA@0.327775, 0 0 0 0 ENSG00000185203.7 ENST00000399966.4 chrX:155244288-155246502 2 1052 1160 intergenic 9.57 0 0,1,1 0 0,1,0 0 0 0 0 0 0 0 0 0 1 1 chimp,human,macaque,marmoset,orangutan, antisense non_coding A549@0.138532,AG04450@0,BJ@0.0208635,GM12878@0.056027,H1HESC@0.34535,HELAS3@0.050041,HEPG2@0.136601,HMEC@0.101006,HSMM@0.0039045,HUVEC@0.005067,K562@1.51188,MCF7@0.711987,NHEK@0.00249967,NHLF@0,SKNSHRA@0.577058, 38 3 0 0 ENSGR0000226179.1 ENSTR0000391707.2 chrY:231725-232586 2 426 433 intergenic -7.26 0 0,0,0 0 0,0,0 0 0 0 0 0 0 46.2159624413146 94.891454965358 0 0 0 human, antisense non_coding A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSGR0000237531.1 ENSTR0000420865.1 chrY:900956-905100 2 586 3556 intergenic 2.70 0 0,0,0 0 0,0,0 0 0 0 0 0 0 89.2798634812287 1.35770528683915 0 0 0 human,macaque,orangutan, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 140 2 85 2 ENSGR0000236871.1 ENSTR0000434938.1 chrY:1465320-1467852 2 355 2175 intergenic -8.65 0 0,0,0 0 0,0,0 0 0 0 0 0 0 0 98.1549425287356 0 0 0 human,macaque,marmoset,orangutan, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 186 2 120 2 ENSGR0000236871.1 ENSTR0000430235.1 chrY:1465918-1468295 3 367 2006 intergenic 0.26 0 0,0,0 0 0,0,0 0 0 0 0 0 0 0 106.424227318046 0 0 0 human,orangutan, lincRNA non_coding A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 184 2 119 2 ENSGR0000236017.2 ENSTR0000443929.1 chrY:1470662-1472386 2 572 1150 exonic 1.16 0 0,0,0 0 0,0,0 0 0 0 0 0 0 59.2587412587413 295.512173913043 0 0 0 human,macaque, antisense antisense A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSGR0000236017.2 ENSTR0000425740.2 chrY:1470704-1482808 4 836 11262 exonic 5.71 0 0,0,0 0 0,0,0 0 0 0 0 0 0 81.1686602870813 31.160007103534 0 0 0 horse,human,orangutan, antisense antisense A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSGR0000236017.2 ENSTR0000419737.1 chrY:1470814-1484319 6 1750 11745 exonic 5.71 0 0,0,0 0 0,0,0 0 0 0 0 0 0 31.0845714285714 30.997871434653 0 0 0 human, antisense non_coding A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSGR0000236017.2 ENSTR0000420411.1 chrY:1470936-1484314 4 920 12452 exonic 5.71 0 0,0,0 0 0,0,0 0 0 0 0 0 0 48.9217391304348 28.182139415355 22.849 0 0 elephant,human, antisense antisense A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 101 2 56 2 ENSGR0000223511.1 ENSTR0000427886.1 chrY:1801477-1810881 3 442 8958 intergenic -5.50 0 0,0,0 0 0,0,0 0 0 0 0 0 0 0 0 0 0 0 human,orangutan, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 171 2 111 2 ENSGR0000223511.1 ENSTR0000432272.1 chrY:1803010-1824878 2 380 21486 intergenic -0.38 0 0,0,0 0 0,0,0 0 0 0 0 0 0 0 2.87577957739924 0 0 0 human,marmoset,orangutan, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSGR0000234622.1 ENSTR0000453953.1 chrY:1836240-1837669 2 546 881 intergenic 1.37 0 0,0,0 0 0,0,0 0 0 0 0 0 0 0 0 0 0 0 human,macaque,marmoset,orangutan, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 149 2 0 0 ENSGR0000223571.1 ENSTR0000437244.1 chrY:2202336-2204451 2 649 1464 intronic -3.89 0 0,0,0 0 0,0,0 0 0 0 0 0 0 0 0 0 0 0 chimp,human,macaque,orangutan, sense_intronic sense_intronic A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 132 2 0 0 ENSGR0000230542.1 ENSTR0000445785.1 chrY:2481029-2483388 2 1338 1019 intergenic 0.77 1 0,0,0 0 0,0,0 0 0 0 0 0 0 0 0 0 0 0 chimp,human,macaque,orangutan, lincRNA non_coding A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000233070.1 ENST00000417305.1 chrY:2834885-2870667 3 497 35281 exonic 1.44 0 0,0,0 0 0,0,0 0 21.1651313738273 0 41.8953722334004 77.0888296816984 0 40.0281690140845 96.2555483121227 0 0 0 chimp,human, processed_transcript processed_transcript A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0.034968,HMEC@0,HSMM@0,HUVEC@0.0333655,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000233070.1 ENST00000431145.1 chrY:2869669-2870612 3 416 523 intergenic -0.70 0 0,0,0 0 0,0,0 0 0 0 0 0 0 0 0 0 0 0 chimp,human, processed_transcript processed_transcript A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0.034968,HMEC@0,HSMM@0,HUVEC@0.0333655,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000231535.1 ENST00000444263.1 chrY:2870953-2965258 3 584 93717 intergenic -1.73 0 0,0,0 0 0,0,0 0 0 0 159.407534246575 2.4299433400557 0 202.465753424658 3.16869938218253 0 0 0 human, lincRNA lincRNA A549@0.174289,AG04450@0.062188,BJ@0.022634,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0.063631,HMEC@0,HSMM@0.011664,HUVEC@0.375831,K562@0,MCF7@0,NHEK@0,NHLF@0.342186,SKNSHRA@0, 170 2 0 0 ENSG00000231535.1 ENST00000425031.1 chrY:2871039-2970313 4 524 98744 intergenic -1.73 0 0,0,0 0 0,0,0 0 0 0 60.8835877862595 3.15068257311837 0 69.9637404580153 4.04216965081423 0 0 0 chimp,human,marmoset,orangutan, lincRNA lincRNA A549@0.174289,AG04450@0.062188,BJ@0.022634,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0.063631,HMEC@0,HSMM@0.011664,HUVEC@0.375831,K562@0,MCF7@0,NHEK@0,NHLF@0.342186,SKNSHRA@0, 0 0 0 0 ENSG00000229308.1 ENST00000426699.1 chrY:3904538-3968361 2 557 63264 intergenic -1.95 0 0,0,0 0 0,0,0 0 0 0 0 0.485426150733435 0 0 0.843686772888214 0 0 0 human, lincRNA lincRNA A549@0.008824,AG04450@0,BJ@0,GM12878@0,H1HESC@0.0312375,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@24.6435,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000237069.2 ENST00000451467.1 chrY:6110487-6111651 3 509 651 intergenic -5.70 0 0,0,0 0 0,0,0 0 0 0 0 0 0 0 0 0 0 0 chimp,human, processed_transcript processed_transcript A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000234830.2 ENST00000451062.1 chrY:6124308-6131994 3 2329 5353 intergenic 2.32 0 0,1,0 0 0,0,0 0 0 0 0 0 0 181.440961786174 0 0 0 0 chimp,human, processed_transcript processed_transcript A549@0.0153315,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 6 6 3 6 ENSG00000234830.2 ENST00000452103.1 chrY:6126374-6131976 4 463 5133 intergenic 6.04 0 0,1,0 0 0,0,0 0 0 0 0 0 0 0 0 0 0 0 chimp,cow,human,marmoset, processed_transcript processed_transcript A549@0.0153315,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 11 6 6 6 ENSG00000234659.1 ENST00000417585.1 chrY:6182796-6184282 3 407 1075 intergenic 1.46 0 0,0,0 0 0,0,0 0 0 0 0 0 0 0 0 18.02 0 0 chimp,human, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000229643.1 ENST00000439525.1 chrY:6225260-6229454 3 445 3745 intergenic -0.27 0 0,0,0 0 0,0,0 0 0 0 0 0 0 88.0561797752809 24.2208277703605 253.873 0 0 chimp,human,macaque,orangutan, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000129816.5 ENST00000250776.5 chrY:6258472-6279605 5 905 20220 intergenic 4.75 1 0,0,0 0 0,0,0 0 0 0 0 0 0 0 0 0 0 1 chimp,human, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000212856.4 ENST00000450591.1 chrY:6274285-6292186 7 3161 14728 intergenic 3.00 1 0,0,0 0 0,0,0 0 0 0 0 0 0 0 0 0 0 0 chimp,human,macaque,orangutan, lincRNA lincRNA A549@0.0020555,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000237563.1 ENST00000421353.1 chrY:6311475-6315118 2 305 3336 intergenic 0 0 0,0,0 0 0,0,0 0 0 0 0 0 0 0 0 0 0 0 chimp,human,orangutan, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 194 2 125 2 ENSG00000147753.5 ENST00000276770.4 chrY:6317509-6325947 7 1360 7066 intergenic 1.99 1 0,0,0 0 0,0,0 0 0 0 0 0 0 0 0 0 0 0 chimp,human,macaque,orangutan, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000147753.5 ENST00000457100.1 chrY:6317509-6325947 6 1105 7323 intergenic 1.99 1 0,0,0 0 0,0,0 0 0 0 0 0 0 0 0 0 0 0 chimp,human,macaque,orangutan, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000147753.5 ENST00000449828.1 chrY:6321946-6325947 3 706 3291 intergenic 1.99 1 0,0,0 0 0,0,0 0 0 0 0 0 0 0 0 0 0 0 chimp,human,macaque,orangutan, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 123 2 76 2 ENSG00000185700.6 ENST00000455570.1 chrY:6338814-6341671 3 515 2338 intergenic 2.59 1 0,0,0 0 0,0,0 0 0 0 0 0 0 0 0 0 0 0 chimp,human,macaque,orangutan, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000185700.6 ENST00000328819.4 chrY:6339072-6341671 3 528 2067 intergenic 2.59 0 0,0,0 0 0,0,0 0 0 0 0 0 0 0 0 0 0 0 chimp,human,macaque,orangutan, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000225520.1 ENST00000437686.1 chrY:7567398-7569288 2 190 1698 intergenic -5.21 0 0,0,0 0 0,0,0 0 0 0 0 0 0 0 0 0 0 0 chimp,human, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0.0194865,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000234795.3 ENST00000442584.1 chrY:7610636-7690901 6 1985 78270 intergenic 2.54 1 0,0,0 0 0,0,0 0 0 0 26.824685138539 6.24464034751501 0 37.3183879093199 10.5889101827009 0 0 0 chimp,human,macaque,orangutan, processed_transcript processed_transcript A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0.0158365,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000237048.2 ENST00000413466.2 chrY:7672965-7678724 2 977 4780 intergenic 1.21 0 0,0,0 0 0,0,0 0 0 0 0 0 0 0 0 0 0 0 NA lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000232348.1 ENST00000413486.1 chrY:8506335-8513440 5 688 6409 intergenic 2.46 1 0,0,0 0 0,0,0 0 0 0 0 0 0 0 0 0 0 0 chimp,human,macaque,marmoset,orangutan, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000233699.1 ENST00000438677.1 chrY:8551411-8551919 2 219 287 intergenic 3.06 0 0,0,0 0 0,0,0 0 0 0 0 0 0 0 0 0 0 0 chimp,human,macaque,orangutan, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000232419.1 ENST00000453955.1 chrY:8572513-8573324 2 267 542 intergenic 0 0 0,0,0 0 0,0,0 0 0 0 0 0 0 0 0 0 0 0 chimp,human,macaque,orangutan, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000180910.7 ENST00000253470.4 chrY:8651351-8685423 5 832 33232 intergenic -4.77 0 0,0,0 0 0,0,0 0 0 0 0 3.43033822821377 0 206.899038461538 8.89856162734714 0 0 0 chimp,human, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000232808.1 ENST00000434487.1 chrY:9167489-9172441 2 257 4693 intergenic 4.53 0 0,0,0 0 0,0,0 0 0 0 0 0 0 0 5.80247176646069 0 0 0 cat,chimp,dog,human,panda, antisense antisense A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000225560.2 ENST00000426661.1 chrY:9185120-9193010 4 2336 5548 intronic 2.32 0 0,0,0 0 0,1,0 0 0 0 0 0 0 126.575342465753 0 0 0 1 chimp,human,orangutan, antisense antisense A549@0.0217675,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 6 6 3 6 ENSG00000225560.2 ENST00000432394.1 chrY:9187188-9192791 4 464 5133 intronic 6.04 0 0,0,0 0 0,1,0 0 0 0 0 0 0 0 0 0 0 0 chimp,cow,human,marmoset, antisense antisense A549@0.0217675,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 11 6 6 6 ENSG00000228383.2 ENST00000433321.1 chrY:9205412-9213290 4 2321 5551 intronic 2.32 0 0,0,0 0 0,1,0 0 0 0 0 0 0 102.218009478673 0 103.2 0 1 chimp,human,orangutan, antisense antisense A549@0.024905,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 6 6 3 6 ENSG00000228383.2 ENST00000436801.1 chrY:9207466-9213071 4 463 5136 intronic 6.04 0 0,0,0 0 0,1,0 0 0 0 0 0 0 0 0 0 0 0 chimp,cow,human,marmoset, antisense antisense A549@0.024905,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 11 6 6 6 ENSG00000228383.2 ENST00000432892.1 chrY:9212578-9214701 9 756 1351 intronic -1.82 0 0,0,0 0 0,1,0 0 0 0 0 0 0 264.825396825397 136.479644707624 688 0 0 cat,chimp,cow,elephant,guinea_pig,horse,human,macaque,panda,pig, antisense antisense A549@0.024905,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000228383.2 ENST00000452256.2 chrY:9212578-9235047 9 756 21697 intronic -4.97 0 0,0,0 0 0,1,0 0 0 0 0 0 0 244.424603174603 107.923583905609 635 0 0 cat,chimp,cow,dog,elephant,guinea_pig,horse,human,macaque,marmoset,mouse,orangutan,panda,pig,rabbit, antisense antisense A549@0.024905,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000237802.2 ENST00000442145.1 chrY:9225731-9233636 4 2336 5563 intronic 2.32 0 0,0,0 0 0,0,0 0 0 0 0 0 0 130.374143835616 0 95.25 0 0 chimp,human, antisense antisense A549@0.0206835,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 6 6 3 6 ENSG00000237802.2 ENST00000450658.1 chrY:9227800-9233417 4 463 5148 intronic 6.04 0 0,0,0 0 0,0,0 0 0 0 0 0 0 0 0 0 0 0 chimp,cow,human,marmoset, antisense antisense A549@0.0206835,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 11 6 6 6 ENSG00000228383.2 ENST00000420524.2 chrY:9232924-9235047 9 756 1351 intronic -2.72 0 0,0,0 0 0,0,0 0 0 0 0 0 0 244.424603174603 125.965951147298 635 0 0 cat,chimp,cow,dog,elephant,guinea_pig,horse,human,macaque,orangutan,panda,pig, antisense antisense A549@0.024905,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000230066.1 ENST00000427622.1 chrY:9334896-9342768 4 2321 5545 intronic 2.32 0 0,0,0 0 0,0,0 0 0 0 0 0 0 65.5226195605343 0 91.656 0 0 chimp,human, antisense antisense A549@0.013884,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 6 6 3 6 ENSG00000230066.1 ENST00000414596.1 chrY:9336950-9342550 4 463 5131 intronic 6.04 0 0,0,0 0 0,0,0 0 0 0 0 0 0 0 0 0 0 0 chimp,cow,human,marmoset, antisense antisense A549@0.013884,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 11 6 6 6 ENSG00000234803.2 ENST00000448006.1 chrY:9355208-9363096 4 2334 5548 intergenic 2.32 0 0,0,0 0 0,0,0 0 0 0 0 0 0 104.488431876607 0 99.509 0 0 chimp,human, antisense antisense A549@0.019807,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 6 6 3 6 ENSG00000234803.2 ENST00000418016.1 chrY:9357275-9362877 4 463 5133 intergenic 6.04 0 0,0,0 0 0,0,0 0 0 0 0 0 0 0 0 0 0 0 chimp,cow,human,marmoset, antisense antisense A549@0.019807,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 11 6 6 6 ENSG00000183385.5 ENST00000329684.3 chrY:9528709-9531308 3 528 2067 intergenic 2.59 1 0,0,0 0 0,0,0 0 0 0 0 0 0 0 24.3444605708757 10.878 0 0 chimp,human,macaque,orangutan, lincRNA non_coding A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000183385.5 ENST00000426035.1 chrY:9528709-9531566 3 515 2338 intergenic 2.59 1 0,0,0 0 0,0,0 0 0 0 0 0 0 0 21.5226689478186 10.878 0 0 chimp,human,macaque,orangutan, lincRNA non_coding A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000147761.4 ENST00000447655.1 chrY:9544433-9548434 3 706 3291 intergenic 1.99 1 0,0,0 0 0,0,0 0 0 0 0 0 0 0 0 0 0 0 chimp,human,macaque,orangutan, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 123 2 76 2 ENSG00000147761.4 ENST00000276779.4 chrY:9544433-9552871 7 1360 7066 intergenic 1.99 1 0,0,0 0 0,0,0 0 0 0 0 0 0 0 0 0 0 0 chimp,human,macaque,orangutan, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000147761.4 ENST00000415405.1 chrY:9544433-9552871 6 1105 7323 intergenic 1.99 1 0,0,0 0 0,0,0 0 0 0 0 0 0 0 0 0 0 0 chimp,human,macaque,orangutan, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000228890.1 ENST00000430228.1 chrY:9555262-9558905 2 305 3336 intergenic 0 0 0,0,0 0 0,0,0 0 0 0 0 0 0 0 0 0 0 0 chimp,human,orangutan, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 194 2 125 2 ENSG00000212855.4 ENST00000417072.1 chrY:9578193-9596085 7 3161 14719 intergenic 3.00 1 0,0,0 0 0,0,0 0 0 0 0 0 0 0 0 0 0 0 chimp,human,macaque,orangutan, lincRNA lincRNA A549@0.0020555,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000129845.5 ENST00000250805.5 chrY:9590765-9611898 5 905 20220 intergenic 4.75 1 0,0,0 0 0,0,0 0 0 0 0 0 0 0 0 0 0 0 chimp,human, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000224075.1 ENST00000445253.1 chrY:9638762-9650854 5 422 11662 intergenic 1.19 0 0,0,0 0 0,0,0 0 0 0 0 0 0 62.1682464454976 23.0460469902247 0 0 0 chimp,human,orangutan, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000228379.1 ENST00000449963.1 chrY:9650924-9655122 3 445 3749 intergenic -0.16 0 0,0,0 0 0,0,0 0 0 0 0 0 0 111.359550561798 28.5628167511336 335.808 0 0 chimp,human,orangutan, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000239225.1 ENST00000452889.1 chrY:9748407-9749571 3 509 651 intergenic -5.70 0 0,0,0 0 0,0,0 0 0 0 0 0 0 0 0 0 0 0 chimp,human, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000239204.1 ENST00000430152.1 chrY:14465804-14468226 2 497 1923 intergenic 3.75 0 0,1,0 0 0,0,0 0 0 0 0 0 0 350.030181086519 0.848673946957878 0 0 0 cat,chimp,cow,dog,elephant,guinea_pig,horse,human,macaque,marmoset,opossum,orangutan,panda,platypus,rabbit, processed_transcript processed_transcript A549@0.195385,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0.465642,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0.003867,SKNSHRA@0, 0 0 0 0 ENSG00000233864.3 ENST00000457658.1 chrY:14774265-14802370 4 626 27473 intergenic -2.98 0 0,1,0 1 0,0,0 0 0 0 0 0 0 0 0 0 0 0 chimp,human, lincRNA lincRNA A549@4.28278,AG04450@6.74051,BJ@5.97625,GM12878@0,H1HESC@6.9049,HELAS3@0,HEPG2@4.52079,HMEC@0.514878,HSMM@3.90367,HUVEC@4.64663,K562@0,MCF7@0,NHEK@0,NHLF@2.34965,SKNSHRA@0, 0 0 0 0 ENSG00000233864.3 ENST00000440408.1 chrY:14774265-14804162 4 5280 24611 intergenic 0.15 1 0,1,0 1 0,0,0 0 0 0 0 0 0 0 0 0 0 0 chimp,human, lincRNA lincRNA A549@4.28278,AG04450@6.74051,BJ@5.97625,GM12878@0,H1HESC@6.9049,HELAS3@0,HEPG2@4.52079,HMEC@0.514878,HSMM@3.90367,HUVEC@4.64663,K562@0,MCF7@0,NHEK@0,NHLF@2.34965,SKNSHRA@0, 0 0 0 0 ENSG00000233864.3 ENST00000543097.1 chrY:14774284-14776614 2 396 1932 intergenic 0 0 0,1,0 1 0,0,0 0 0 0 0 0 0 0 0 0 0 1 chimp,human, lincRNA lincRNA A549@4.28278,AG04450@6.74051,BJ@5.97625,GM12878@0,H1HESC@6.9049,HELAS3@0,HEPG2@4.52079,HMEC@0.514878,HSMM@3.90367,HUVEC@4.64663,K562@0,MCF7@0,NHEK@0,NHLF@2.34965,SKNSHRA@0, 0 0 0 0 ENSG00000233864.3 ENST00000417071.1 chrY:14774468-14800184 4 878 24832 intergenic -2.98 0 0,1,1 1 0,0,0 0 0 0 0 0 0 0 0 0 0 0 chimp,human, lincRNA lincRNA A549@4.28278,AG04450@6.74051,BJ@5.97625,GM12878@0,H1HESC@6.9049,HELAS3@0,HEPG2@4.52079,HMEC@0.514878,HSMM@3.90367,HUVEC@4.64663,K562@0,MCF7@0,NHEK@0,NHLF@2.34965,SKNSHRA@0, 0 0 0 0 ENSG00000227822.2 ENST00000430079.1 chrY:15863673-15970474 6 683 106108 intergenic 13.32 0 0,0,0 0 0,0,0 0 0 0 109.524158125915 5.04725374147095 1.912 210.453879941435 15.2177121423455 26.333 0 0 chimp,dog,elephant,horse,human,macaque,marmoset,orangutan,pig, processed_transcript processed_transcript A549@0.0068025,AG04450@0,BJ@0,GM12878@0,H1HESC@0.993418,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000223517.1 ENST00000435111.1 chrY:16388092-16389369 2 538 737 intergenic -7.96 0 0,0,0 0 0,0,0 0 0 0 0 0 0 0 0 0 0 0 chimp,human,macaque,marmoset,orangutan, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000228787.1 ENST00000434164.1 chrY:16905522-16915913 4 528 9857 intronic -2.50 0 0,0,0 0 0,0,0 0 0 0 0 0 0 0 0 0 0 0 chimp,human,macaque,orangutan, antisense antisense A549@0.054521,AG04450@0.0088535,BJ@0.0276085,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0.055816,HUVEC@0.0406575,K562@0,MCF7@0,NHEK@0,NHLF@0.003627,SKNSHRA@0, 1 96 0 0 ENSG00000224989.1 ENST00000421205.1 chrY:19612838-19628621 10 2032 13733 intergenic 3.12 1 0,0,0 0 0,0,0 0 0 0 0 0 0 0 2.69860918954344 0 0 0 chimp,human,macaque,marmoset,orangutan, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0.00189,SKNSHRA@0, 74 2 42 2 ENSG00000230663.1 ENST00000458667.1 chrY:19664680-19691634 5 2027 24919 intergenic 3.67 1 0,0,0 0 0,0,0 0 0 0 0 0 0 0 25.0852361651752 0 0 0 chimp,human,orangutan, lincRNA lincRNA A549@1.05425,AG04450@0,BJ@0.005567,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0.066899,HMEC@0,HSMM@0.0044875,HUVEC@0.104077,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000233522.1 ENST00000419557.1 chrY:20488139-20515096 5 2026 24923 intergenic 3.67 0 0,0,0 0 0,0,0 0 0 0 0 0 0 0 20.5646992737632 0 0 0 chimp,human,orangutan, lincRNA lincRNA A549@1.07166,AG04450@0,BJ@0.0055695,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0.05445,HMEC@0,HSMM@0.0044895,HUVEC@0.0980565,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000226362.1 ENST00000458627.1 chrY:20551156-20566932 10 2033 13725 intergenic 3.12 0 0,0,0 0 0,0,0 0 0 0 0 0 0 0 16.6183606557377 0 0 0 chimp,human,macaque,marmoset,orangutan, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0.001889,SKNSHRA@0, 74 2 42 2 ENSG00000131007.5 ENST00000545582.1 chrY:20743092-20750598 4 1497 6003 exonic 1.74 0 0,0,0 0 0,0,0 0 0 0 1.91583166332665 0 0 3.8563794255177 2.81609195402299 3.012 1 1 chimp,human,macaque,marmoset,orangutan, processed_transcript processed_transcript A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0.0014195,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000131007.5 ENST00000433794.1 chrY:20743092-20752407 5 1632 7675 exonic 1.74 0 0,0,0 0 0,0,0 0 0 0 1.75735294117647 0 0 2.61458333333333 2.79127035830619 0 0 0 chimp,human,macaque,marmoset,orangutan, processed_transcript processed_transcript A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0.0014195,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 85 2 49 2 ENSG00000131009.4 ENST00000432335.1 chrY:20891768-20901083 5 1632 7675 exonic 1.74 0 0,0,0 0 0,0,0 0 0 0 1.75735294117647 0 0 6.46691176470588 1.52195439739414 0 0 0 chimp,human,macaque,marmoset,orangutan, processed_transcript processed_transcript A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 85 2 49 2 ENSG00000176728.3 ENST00000324446.3 chrY:21034387-21040114 2 1493 4232 intergenic 0.28 1 0,0,1 0 0,0,0 0 0 0 0 0 0 0 0 0 0 0 chimp,human,macaque,marmoset,orangutan, processed_transcript non_coding A549@0.073566,AG04450@0.832885,BJ@1.06052,GM12878@0,H1HESC@1.49123,HELAS3@0,HEPG2@0,HMEC@0,HSMM@1.06338,HUVEC@0.518502,K562@0,MCF7@0,NHEK@0,NHLF@0.166829,SKNSHRA@0, 0 0 0 0 ENSG00000176728.3 ENST00000454875.1 chrY:21034389-21239004 3 541 204070 intergenic 0.28 1 0,0,1 0 0,0,0 0 0.647469005733327 0 0 3.08864605282501 0 0 31.0940755623071 215.533 0 0 chimp,human,macaque,marmoset,orangutan, processed_transcript non_coding A549@0.073566,AG04450@0.832885,BJ@1.06052,GM12878@0,H1HESC@1.49123,HELAS3@0,HEPG2@0,HMEC@0,HSMM@1.06338,HUVEC@0.518502,K562@0,MCF7@0,NHEK@0,NHLF@0.166829,SKNSHRA@0, 0 0 0 0 ENSG00000176728.3 ENST00000452584.1 chrY:21094203-21237882 5 855 142816 intergenic -1.80 0 0,0,0 1 0,0,0 0 0.925169448801255 0 0 4.17251568451714 0 14.2771929824561 42.8609399507058 146.528 0 0 chimp,elephant,human,macaque,marmoset,orangutan, processed_transcript non_coding A549@0.073566,AG04450@0.832885,BJ@1.06052,GM12878@0,H1HESC@1.49123,HELAS3@0,HEPG2@0,HMEC@0,HSMM@1.06338,HUVEC@0.518502,K562@0,MCF7@0,NHEK@0,NHLF@0.166829,SKNSHRA@0, 0 0 0 0 ENSG00000176728.3 ENST00000331787.2 chrY:21094585-21239302 2 513 144202 intergenic 2.12 0 0,1,1 1 0,0,0 0 0.916277166752195 0 0 4.13241147834288 0 0 43.5497635261647 404.763 0 0 chimp,human,marmoset,mouse,orangutan,rat, processed_transcript non_coding A549@0.073566,AG04450@0.832885,BJ@1.06052,GM12878@0,H1HESC@1.49123,HELAS3@0,HEPG2@0,HMEC@0,HSMM@1.06338,HUVEC@0.518502,K562@0,MCF7@0,NHEK@0,NHLF@0.166829,SKNSHRA@0, 0 0 0 0 ENSG00000176728.3 ENST00000447937.1 chrY:21203384-21239281 7 913 34972 intergenic 6.53 0 0,1,0 1 0,0,0 0 0.676569827290404 0 0 2.08658355255633 0 13.3702081051479 153.882448816196 391.428 0 0 chimp,human,orangutan, processed_transcript non_coding A549@0.073566,AG04450@0.832885,BJ@1.06052,GM12878@0,H1HESC@1.49123,HELAS3@0,HEPG2@0,HMEC@0,HSMM@1.06338,HUVEC@0.518502,K562@0,MCF7@0,NHEK@0,NHLF@0.166829,SKNSHRA@0, 0 0 0 0 ENSG00000215580.4 ENST00000441139.1 chrY:21617317-21665039 9 3452 44254 intergenic 14.88 0 0,0,0 0 0,0,0 0 0 0 259.612977983778 65.8382971030867 97.24 293.128910776362 70.6454557780088 106.216 0 0 chimp,horse,human, processed_transcript processed_transcript A549@0.026626,AG04450@0.00085,BJ@0,GM12878@0,H1HESC@0.009525,HELAS3@0,HEPG2@0.00961,HMEC@0,HSMM@0.000823,HUVEC@0.000878,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000215580.4 ENST00000400605.1 chrY:21618198-21665022 11 2759 44045 intergenic 14.88 0 0,0,0 0 0,0,0 0 0 0 269.012323305546 64.5887614939267 88.4 299.825299021385 69.6368032693836 96.56 0 0 chimp,horse,human, processed_transcript processed_transcript A549@0.026626,AG04450@0.00085,BJ@0,GM12878@0,H1HESC@0.009525,HELAS3@0,HEPG2@0.00961,HMEC@0,HSMM@0.000823,HUVEC@0.000878,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000215580.4 ENST00000539453.1 chrY:21628826-21665034 4 938 35264 intergenic 7.09 0 0,0,0 0 0,0,0 0 0 0 287.418976545842 82.3584959165154 94.64 319.579957356077 88.5202189201452 103.376 0 0 cat,chimp,dog,elephant,guinea_pig,horse,human,mouse,orangutan,panda,rat, processed_transcript processed_transcript A549@0.026626,AG04450@0.00085,BJ@0,GM12878@0,H1HESC@0.009525,HELAS3@0,HEPG2@0.00961,HMEC@0,HSMM@0.000823,HUVEC@0.000878,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000229236.1 ENST00000455084.1 chrY:22627554-22681114 6 1622 51928 intergenic 9.11 0 0,0,0 0 0,0,0 0 0 0 0 0 0 0 0 0 0 0 chimp,human, lincRNA lincRNA A549@0.021714,AG04450@0.103286,BJ@0.090305,GM12878@0,H1HESC@0.023028,HELAS3@0,HEPG2@0.15793,HMEC@0,HSMM@0.0145845,HUVEC@0.070424,K562@0,MCF7@0,NHEK@0,NHLF@0.010092,SKNSHRA@0, 0 0 0 0 ENSG00000229236.1 ENST00000439472.1 chrY:22669140-22680293 2 338 10813 intergenic -0.04 0 0,0,1 0 0,0,0 0 0 0 0 0 0 0 0 0 0 0 chimp,human,macaque,orangutan, lincRNA lincRNA A549@0.021714,AG04450@0.103286,BJ@0.090305,GM12878@0,H1HESC@0.023028,HELAS3@0,HEPG2@0.15793,HMEC@0,HSMM@0.0145845,HUVEC@0.070424,K562@0,MCF7@0,NHEK@0,NHLF@0.010092,SKNSHRA@0, 0 0 0 0 ENSG00000254488.1 ENST00000527562.1 chrY:23200175-23206610 3 980 5451 intergenic -0.79 0 0,0,0 0 0,0,0 0 0 0 0 0 0 0 0 0 0 0 NA lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000242300.1 ENST00000444169.1 chrY:23557034-23563448 5 529 5877 intronic -0.41 0 0,0,0 0 0,0,0 0 0 0 0 0 12.75 651.001890359168 256.121320401565 28.03 0 0 chimp,cow,dog,elephant,guinea_pig,horse,human,macaque,marmoset,mouse,opossum,orangutan,platypus,rabbit,rat, processed_transcript processed_transcript A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000184991.2 ENST00000330337.2 chrY:23745486-23756552 6 653 10403 intergenic 13.78 0 0,0,0 0 0,0,0 0 0 0 0 0 0 0 0 0 0 0 chimp,human,macaque,orangutan, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000236951.1 ENST00000417910.1 chrY:24246961-24252016 4 741 4308 intergenic -4.64 0 0,0,0 0 0,0,0 0 0 0 0 0 0 0 0 0 0 0 chimp,human,macaque,orangutan, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 118 2 71 2 ENSG00000236951.1 ENST00000419158.1 chrY:24247839-24293631 13 2926 42842 intergenic 1.67 1 0,0,0 0 0,0,0 0 0 0 0 0 0 0 0 0 0 0 chimp,human, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 59 2 0 0 ENSG00000131548.6 ENST00000253848.3 chrY:24291113-24292978 3 488 1373 intergenic 0.28 1 0,0,0 0 0,0,0 0 0 0 0 0 0 0 0 0 0 0 chimp,human,macaque,orangutan, antisense antisense A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 159 2 103 2 ENSG00000131548.6 ENST00000545808.1 chrY:24291169-24292831 4 383 1273 intergenic 1.06 0 0,0,0 0 0,0,0 0 0 0 0 0 0 0 0 0 0 1 chimp,human,macaque,orangutan, antisense antisense A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 182 2 117 2 ENSG00000215560.2 ENST00000400581.2 chrY:24442945-24445023 2 1560 516 intergenic -0.28 1 0,0,0 0 0,0,0 0 0 0 0 0 0 0 0 0 0 0 chimp,human, lincRNA lincRNA A549@0,AG04450@0,BJ@0.0137435,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000235059.1 ENST00000446299.1 chrY:24585087-24630861 13 2926 42824 intergenic 1.67 1 0,0,0 0 0,0,0 0 0 0 0 0 0 0 0 0 0 0 chimp,human, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 59 2 0 0 ENSG00000131538.6 ENST00000253838.3 chrY:24585740-24587605 3 488 1373 intergenic 0.28 1 0,0,0 0 0,0,0 0 0 0 0 0 0 0 0 0 0 0 chimp,human,macaque,orangutan, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 159 2 103 2 ENSG00000131538.6 ENST00000538537.1 chrY:24585887-24587549 4 383 1273 intergenic 1.06 0 0,0,0 0 0,0,0 0 0 0 0 0 0 0 0 0 0 1 chimp,human,macaque,orangutan, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 182 2 117 2 ENSG00000235059.1 ENST00000439653.1 chrY:24626684-24631739 4 741 4308 intergenic -4.64 0 0,0,0 0 0,0,0 0 0 0 0 0 0 0 0 0 0 0 chimp,human,macaque,orangutan, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 118 2 71 2 ENSG00000250136.1 ENST00000400578.2 chrY:24795438-24800925 4 388 5093 intergenic -1.09 0 0,0,0 0 0,1,0 0 0 0 0 0 0 489.845360824742 38.0596897702729 255.932 0 0 cat,chimp,dog,elephant,guinea_pig,human,macaque,marmoset,mouse,opossum,orangutan,panda,pig,platypus,rabbit,rat, processed_transcript processed_transcript A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 52 3 30 3 ENSG00000228240.1 ENST00000416110.1 chrY:24997731-24998862 2 164 965 intergenic 0 0 0,0,0 0 0,0,0 0 0 0 0 0 0 0 0 0 0 0 chimp,human,macaque,marmoset,orangutan, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000226906.1 ENST00000436568.1 chrY:25082602-25119431 4 1342 35481 intergenic 1.76 0 0,0,0 0 0,0,0 0 0 0 0 0 0 0 0 0 0 0 chimp,human,macaque,orangutan, lincRNA lincRNA A549@0.0698745,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0.0048495,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 36 3 0 0 ENSG00000197955.4 ENST00000458444.1 chrY:25687556-25693043 4 388 5093 intergenic -1.09 0 0,0,0 0 0,1,0 0 0 0 0 0 0 519.786082474227 24.8706067150992 144.751 0 0 cat,chimp,dog,elephant,guinea_pig,human,macaque,marmoset,mouse,opossum,orangutan,panda,pig,platypus,rabbit,rat, processed_transcript processed_transcript A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 52 3 30 3 ENSG00000244231.1 ENST00000306853.1 chrY:26329581-26333378 2 793 3002 intergenic 4.54 0 0,0,0 0 0,0,0 0 0 0 270.756620428752 16.2578281145903 251.386 300.295081967213 25.7151898734177 152.57 0 0 cat,chimp,dog,elephant,guinea_pig,human,macaque,marmoset,orangutan, processed_transcript processed_transcript A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 112 2 65 2 ENSG00000239533.1 ENST00000398377.3 chrY:26356114-26360978 9 1051 3797 intergenic 42.14 0 0,0,0 0 0,0,0 0 0 0 0.262607040913416 6.6692125362128 0 296.006660323501 62.4290229128259 0.987 0 0 cat,chimp,cow,dog,elephant,guinea_pig,horse,human,macaque,marmoset,mouse,orangutan,rabbit,rat, processed_transcript processed_transcript A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000227439.1 ENST00000441906.1 chrY:26631479-26632610 2 164 965 intergenic 0 0 0,0,0 0 0,0,0 0 0 0 0 0 0 0 0 0 0 0 chimp,human,macaque,marmoset,orangutan, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000235412.1 ENST00000420149.1 chrY:26716349-26753172 4 1342 35475 intergenic 1.76 1 0,0,0 0 0,0,0 0 0 0 0 0 0 0 0 0 0 0 chimp,human,macaque,orangutan, lincRNA lincRNA A549@0.069024,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0.0048495,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 36 3 0 0 ENSG00000228296.1 ENST00000456123.1 chrY:27209230-27246039 4 1342 35461 intergenic 1.76 1 0,0,0 0 0,0,0 0 0 0 0 0 0 0 0 0 0 0 chimp,human,macaque,orangutan, lincRNA lincRNA A549@0.0463,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0.003233,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 36 3 0 0 ENSG00000223641.1 ENST00000421387.1 chrY:27329790-27330920 2 164 964 intergenic 0 0 0,0,0 0 0,0,0 0 0 0 0 0 0 0 0 0 0 0 chimp,human,macaque,marmoset,orangutan, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000228786.1 ENST00000427373.1 chrY:27524447-27540866 3 839 15576 intergenic 2.07 0 0,0,0 0 0,0,0 0 0 0 45.3969010727056 2.92809450436569 0 118.307508939213 122.275808936826 0 0 0 chimp,cow,dog,guinea_pig,horse,human,macaque,mouse,orangutan,pig, processed_transcript processed_transcript A549@0,AG04450@0.002797,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0.010175,HMEC@0.014589,HSMM@0,HUVEC@0.0070385,K562@0,MCF7@0,NHEK@0,NHLF@0.0023175,SKNSHRA@0, 5 7 2 7 ENSG00000240450.1 ENST00000306641.1 chrY:27629055-27632852 2 793 3002 intergenic 4.54 0 0,0,0 0 0,0,0 0 0 0 274.306431273644 12.510326449034 255.523 360.834804539723 13.2648234510326 185.077 0 0 cat,chimp,dog,elephant,guinea_pig,human,macaque,marmoset,orangutan, processed_transcript processed_transcript A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 112 2 65 2 ENSG00000231141.1 ENST00000417334.1 chrY:27874637-27879535 3 341 4553 intergenic 1.21 0 0,0,0 0 0,0,0 0 0 0 0 0 0 188.785923753666 108.145179002855 196.686 0 0 chimp,elephant,human,macaque,marmoset,pig, lincRNA lincRNA A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 0 0 0 0 ENSG00000248451.1 ENST00000400476.2 chrY:28269867-28275354 4 388 5093 intergenic -1.09 0 0,0,0 0 0,1,0 0 0 0 0 0 0 479.569587628866 21.1798547025329 202.243 0 0 cat,chimp,dog,elephant,guinea_pig,human,macaque,marmoset,mouse,opossum,orangutan,panda,pig,platypus,rabbit,rat, processed_transcript processed_transcript A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 52 3 30 3 ENSGR0000185203.7 ENSTR0000399966.4 chrY:59347294-59349508 2 1052 1160 intergenic 9.57 0 0,0,0 0 0,1,0 0 0 0 0 0 0 0 0 0 1 1 chimp,human,macaque,marmoset,orangutan, antisense non_coding A549@0,AG04450@0,BJ@0,GM12878@0,H1HESC@0,HELAS3@0,HEPG2@0,HMEC@0,HSMM@0,HUVEC@0,K562@0,MCF7@0,NHEK@0,NHLF@0,SKNSHRA@0, 38 3 0 0